BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026146
(242 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O60762|DPM1_HUMAN Dolichol-phosphate mannosyltransferase OS=Homo sapiens GN=DPM1 PE=1
SV=1
Length = 260
Score = 335 bits (860), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 158/244 (64%), Positives = 200/244 (81%), Gaps = 2/244 (0%)
Query: 1 MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVK 58
+E + +NKYS+++PTYNER N+ LIV+L+ K + +++EII++DDGSPDGT++V +
Sbjct: 17 LEVRSPRQNKYSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDVAE 76
Query: 59 QLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQL 118
QL+++YG DRILLRPR KKLGLGTAYIHG+KHA+G++++IMDADLSHHPK++P FI+KQ
Sbjct: 77 QLEKIYGSDRILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQK 136
Query: 119 ETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLE 178
E IV+GTRY +GGV+GW+L RK+ SRGAN L Q LL PG SDLTGSFRLY+K VLE
Sbjct: 137 EGNFDIVSGTRYKGNGGVYGWDLKRKIISRGANFLTQILLRPGASDLTGSFRLYRKEVLE 196
Query: 179 DVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYL 238
+I CVSKGYVFQMEMIVRA + Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L
Sbjct: 197 KLIEKCVSKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTL 256
Query: 239 LITT 242
TT
Sbjct: 257 FATT 260
>sp|O70152|DPM1_MOUSE Dolichol-phosphate mannosyltransferase OS=Mus musculus GN=Dpm1 PE=2
SV=1
Length = 260
Score = 332 bits (851), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 156/240 (65%), Positives = 197/240 (82%), Gaps = 2/240 (0%)
Query: 5 NKNKNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQ 62
+ ++KYS+++PTYNER N+ LIV+L+ K + +++EII++DDGSPDGT+EV +QL +
Sbjct: 21 SSRQDKYSVLLPTYNERENLPLIVWLLVKSFSESAINYEIIIIDDGSPDGTREVAEQLAE 80
Query: 63 LYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGA 122
+YG DRILLRPR KKLGLGTAYIHG+KHA+G++V+IMDADLSHHPK++P FI+KQ E
Sbjct: 81 IYGPDRILLRPREKKLGLGTAYIHGIKHATGNYVIIMDADLSHHPKFIPEFIRKQKEGNF 140
Query: 123 SIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVIS 182
IV+GTRY +GGV+GW+L RK+ SRGAN + Q LL PG SDLTGSFRLY+K VL+ +I
Sbjct: 141 DIVSGTRYKGNGGVYGWDLKRKIISRGANFITQILLRPGASDLTGSFRLYRKEVLQKLIE 200
Query: 183 SCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
CVSKGYVFQMEMIVRA + Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L TT
Sbjct: 201 KCVSKGYVFQMEMIVRARQMNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
>sp|Q9WU83|DPM1_CRIGR Dolichol-phosphate mannosyltransferase OS=Cricetulus griseus
GN=DPM1 PE=2 SV=1
Length = 266
Score = 332 bits (850), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 156/237 (65%), Positives = 197/237 (83%), Gaps = 2/237 (0%)
Query: 8 KNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
++KYS+++PTYNER N+ LIV+L+ K + +++EII++DDGSPDGT+EV +QL+++YG
Sbjct: 30 RDKYSVLLPTYNERENLPLIVWLLVKSFSESSINYEIIIIDDGSPDGTREVAEQLEKIYG 89
Query: 66 EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
DRILLRPR KKLGLGTAYIHG+KHA+G++V+IMDADLSHHPK++P FI+KQ E IV
Sbjct: 90 PDRILLRPREKKLGLGTAYIHGIKHATGNYVIIMDADLSHHPKFIPEFIRKQKEGNFDIV 149
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
+GTRY +GGV+GW+L RK+ SRGAN + Q LL PG SDLTGSFRLY+K VL+ +I CV
Sbjct: 150 SGTRYKGNGGVYGWDLKRKIISRGANFITQILLRPGASDLTGSFRLYRKEVLQKLIEKCV 209
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
SKGYVFQMEMIVRA + Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L TT
Sbjct: 210 SKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 266
>sp|Q9VIU7|DPM1_DROME Probable dolichol-phosphate mannosyltransferase OS=Drosophila
melanogaster GN=CG10166 PE=3 SV=1
Length = 241
Score = 331 bits (848), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 155/238 (65%), Positives = 196/238 (82%), Gaps = 2/238 (0%)
Query: 7 NKNKYSIIIPTYNERLNIALIVYLIFKHLR--DVDFEIIVVDDGSPDGTQEVVKQLQQLY 64
N +KYSI++PTYNE+ N+ +I++LI K+++ +++E+IV+DDGSPDGT +V K LQ++Y
Sbjct: 4 NGHKYSILMPTYNEKDNLPIIIWLIVKYMKASGLEYEVIVIDDGSPDGTLDVAKDLQKIY 63
Query: 65 GEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASI 124
GED+I+LRPR KLGLGTAYIHG+KHA+G F+VI+DADLSHHPK++P FIK Q E I
Sbjct: 64 GEDKIVLRPRGSKLGLGTAYIHGIKHATGDFIVIIDADLSHHPKFIPEFIKLQQEGNYDI 123
Query: 125 VTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSC 184
V+GTRY +GGV GW+ RKL SRGAN L+Q LL P SDLTGSFRLYKK VLE I+SC
Sbjct: 124 VSGTRYAGNGGVFGWDFKRKLISRGANFLSQVLLRPNASDLTGSFRLYKKDVLEKCIASC 183
Query: 185 VSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
VSKGYVFQMEM+VRA + GY I EVPITFVDR++G+SKLGG+EI+++ K LLYL TT
Sbjct: 184 VSKGYVFQMEMLVRARQHGYTIAEVPITFVDRIYGTSKLGGTEIIQFAKNLLYLFATT 241
>sp|A5GFZ5|DPM1_PIG Dolichol-phosphate mannosyltransferase OS=Sus scrofa GN=DPM1 PE=3
SV=1
Length = 259
Score = 327 bits (837), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 152/237 (64%), Positives = 196/237 (82%), Gaps = 2/237 (0%)
Query: 8 KNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
++KYS+++PTYNER N+ LIV+L+ K + +++EII++DDGSPDGT+++ +QL ++YG
Sbjct: 23 QDKYSVLLPTYNERENLPLIVWLLVKSFSESGINYEIIIIDDGSPDGTRDIAEQLVKIYG 82
Query: 66 EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
D+ILLRPR KKLGLGTAYIHG+KHA+G++++IMDADLSHHPK++P FI+KQ E IV
Sbjct: 83 SDKILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIV 142
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
+GTRY +GGV+GW+L RK+ SRGAN + Q LL PG SDLTGSFRLY+K VL+ +I CV
Sbjct: 143 SGTRYKGNGGVYGWDLKRKIISRGANFITQILLRPGASDLTGSFRLYRKEVLQKLIEKCV 202
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
SKGYVFQMEMIVRA + Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L TT
Sbjct: 203 SKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 259
>sp|Q1JQ93|DPM1_BOVIN Dolichol-phosphate mannosyltransferase OS=Bos taurus GN=DPM1 PE=2
SV=1
Length = 260
Score = 324 bits (830), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 151/237 (63%), Positives = 194/237 (81%), Gaps = 2/237 (0%)
Query: 8 KNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
++KYS+++PTYNER N+ IV+L+ K + ++EII++DDGSPDGT++V +QL+++YG
Sbjct: 24 QDKYSVLLPTYNERENLPFIVWLLVKSFSESGFNYEIIIIDDGSPDGTRDVAEQLEKIYG 83
Query: 66 EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
DRILLRPR KKLGLGTAYIHG+KHA+G++++IMDADLSHHPK++P FI+KQ E IV
Sbjct: 84 SDRILLRPREKKLGLGTAYIHGMKHATGNYIIIMDADLSHHPKFIPEFIRKQKEGNFDIV 143
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
+GTRY +GGV+GW+L RK+ SR AN + Q LL PG SDLTGSFRLY+K VL+ +I C+
Sbjct: 144 SGTRYKGNGGVYGWDLKRKIISRVANFITQILLRPGASDLTGSFRLYRKEVLQKLIGKCI 203
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
SKGYVFQMEMIVRA + Y I EVPI+FVDRV+G SKLGG+EIV +LKGLL L TT
Sbjct: 204 SKGYVFQMEMIVRARQLNYTIGEVPISFVDRVYGESKLGGNEIVSFLKGLLTLFATT 260
>sp|O14466|DPM1_SCHPO Dolichol-phosphate mannosyltransferase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=dpm1 PE=2 SV=1
Length = 236
Score = 309 bits (791), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 150/234 (64%), Positives = 181/234 (77%), Gaps = 2/234 (0%)
Query: 9 NKYSIIIPTYNERLNIALIVYLIFKHL--RDVDFEIIVVDDGSPDGTQEVVKQLQQLYGE 66
+KYS+++PTYNER N+ +I YLI K +D+EI+++DD SPDGTQEV K+LQ++YGE
Sbjct: 2 SKYSVLLPTYNERKNLPIITYLIAKTFDQEKLDWEIVIIDDASPDGTQEVAKELQKIYGE 61
Query: 67 DRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 126
D+ILL+PR KLGLGTAYIHGLK A+G FV+IMDAD SHHPKYLP FIK Q E IV
Sbjct: 62 DKILLKPRSGKLGLGTAYIHGLKFATGDFVIIMDADFSHHPKYLPEFIKLQKEHNYDIVL 121
Query: 127 GTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVS 186
GTRY + GGV+GWNL RK SRGAN+LA T+L GVSD+TGSFRLYKK VLE ++S S
Sbjct: 122 GTRYAKDGGVYGWNLKRKFISRGANLLASTVLGTGVSDVTGSFRLYKKPVLETLMSEVTS 181
Query: 187 KGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLI 240
KGYVFQME+I RA Y I EVPI FVDR++G SKLG +I+ YLKG+ LL
Sbjct: 182 KGYVFQMEIIARAREHNYTIGEVPIAFVDRLYGESKLGMDDILGYLKGVFSLLF 235
>sp|Q54LP3|DPM1_DICDI Dolichol-phosphate mannosyltransferase OS=Dictyostelium discoideum
GN=dpm1 PE=3 SV=1
Length = 254
Score = 289 bits (739), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 137/236 (58%), Positives = 182/236 (77%), Gaps = 2/236 (0%)
Query: 8 KNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
K+KY+II+PTY ER N+ +I++LI L +D+E+++V+D SPDGT EV +QLQ++YG
Sbjct: 17 KDKYTIILPTYKERENLPIIIWLISTELEKCFIDYEVVIVEDNSPDGTLEVAQQLQKIYG 76
Query: 66 EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
E++I + RP K+GLG+AY+ G+K ++G++V++MDADLSHHPK++P FI+KQ + IV
Sbjct: 77 EEKIKILSRPGKMGLGSAYMDGIKKSTGNWVILMDADLSHHPKFIPQFIEKQKKLNCEIV 136
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
TGTRY GGV GWNL RKLTSR AN +A LL PGVSDLTGSFRLY+K VLE +I+
Sbjct: 137 TGTRYQSGGGVFGWNLYRKLTSRVANYIASVLLTPGVSDLTGSFRLYRKDVLEKLITQNK 196
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLIT 241
SKGYVFQ+EM+VRA + GY + EVPITFVDR+FG S L EIV +LK +L L +
Sbjct: 197 SKGYVFQVEMMVRANQLGYQVGEVPITFVDRIFGVSNLDSGEIVGFLKSVLNLFMN 252
>sp|P54856|DPM1_USTMA Dolichol-phosphate mannosyltransferase OS=Ustilago maydis (strain
521 / FGSC 9021) GN=DPM1 PE=3 SV=2
Length = 294
Score = 102 bits (254), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 114/234 (48%), Gaps = 12/234 (5%)
Query: 12 SIIIPTYNERLNIALIVYLIFKHLRD------VDFEIIVVDDGSPDGTQEVVKQLQQLYG 65
S+I+P + E LN+ +V + + EII+VDD S DG+ E V LQ
Sbjct: 31 SVIVPAFRENLNLRPLVTRLSSAFASQSSSELANTEIIIVDDNSRDGSVETVSALQSEGY 90
Query: 66 EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
RI++R + GL +A + G + A G ++ MDADL H P+ +PS + L S V
Sbjct: 91 NVRIIVRTSER--GLSSAVVRGFREARGQRMICMDADLQHPPEAVPSLLLA-LNGQKSFV 147
Query: 126 TGTRY-VRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSC 184
GTRY V W L R++ S GA +LA+ L SD F K
Sbjct: 148 LGTRYGVGVSMDKDWPLHRRIISSGARMLARPLT--SASDPMSGFFGITKHSFHTADHHI 205
Query: 185 VSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYL 238
++G+ ++++V++ I EVP +F R G SKL G + +YL+ L+ L
Sbjct: 206 NAQGFKIALDLLVKSGVHSTDIAEVPFSFGLRQEGESKLDGKVMFKYLQQLVEL 259
>sp|P14020|DPM1_YEAST Dolichol-phosphate mannosyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DPM1 PE=1 SV=3
Length = 267
Score = 101 bits (252), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 116/233 (49%), Gaps = 12/233 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV---DFEIIVVDDGSPDGTQEVVKQLQQLYGE 66
+YS+I+P Y+E+LNI + +F + E+I VDD S DG+ E V L
Sbjct: 4 EYSVIVPAYHEKLNIKPLTTRLFAGMSPEMAKKTELIFVDDNSQDGSVEEVDALAHQGYN 63
Query: 67 DRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 126
RI++R + GL +A + G A G ++V MDADL H P+ +P + + ++
Sbjct: 64 VRIIVRTNER--GLSSAVLKGFYEAKGQYLVCMDADLQHPPETVPKLFESLHDHAFTL-- 119
Query: 127 GTRYVRSGGV-HGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GTRY G+ W + R++ S A ++A+ L ++G F L KK +
Sbjct: 120 GTRYAPGVGIDKDWPMYRRVISSTARMMARPLTI-ASDPMSGFFGLQKKYLENCNPRDIN 178
Query: 186 SKGYVFQMEMIVR---ACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGL 235
S+G+ +E++ + I EVP TF R G SKL G I++YL+ L
Sbjct: 179 SQGFKIALELLAKLPLPRDPRVAIGEVPFTFGVRTEGESKLSGKVIIQYLQQL 231
>sp|B7UFR6|ARNC_ECO27 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC)
GN=arnC PE=3 SV=1
Length = 322
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q G
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAHMLVEASQAEGSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + GL+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYGLVTCLTTT 231
>sp|Q8D342|ARNC_WIGBR Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Wigglesworthia glossinidia brevipalpis GN=arnC PE=3
SV=1
Length = 323
Score = 79.0 bits (193), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 119/238 (50%), Gaps = 20/238 (8%)
Query: 7 NKNKYSIIIPTYNERLNIALIVYLIFKHLR-----DVDFEIIVVDDGSPDGTQEVVKQLQ 61
N K SIIIP YNE+ ++ LI + + + +EII++DDGS D + ++++ +
Sbjct: 3 NFKKLSIIIPVYNEQ---DSLIELIKRTVNTCSKLKIKYEIIIIDDGSNDKSINILEK-E 58
Query: 62 QLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETG 121
L +I+ K G +A + G KH+SG V+ MDADL + P+ +P I E G
Sbjct: 59 ALKQNSKIVAIFLKKNYGQHSAIMAGFKHSSGDLVITMDADLQNPPEEIPKLILNA-EKG 117
Query: 122 ASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVI 181
++ R R N RK++SR N++ Q ++ + D R Y ++++ ++
Sbjct: 118 YDVIGTFRQNRKD-----NWFRKISSRLINIIIQIVIGKSMKDYGCMLRAYNRNIINSIL 172
Query: 182 SSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLL 239
+K +F + + A +I E+P+ +R FG SK ++++ + L + +
Sbjct: 173 E--YNKKNIF---IPILANTLSKNIIEIPVLHYEREFGCSKYNLIKLIKLIYDLFFCI 225
>sp|B1LLK8|ARNC_ECOSM Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=arnC
PE=3 SV=1
Length = 322
Score = 78.6 bits (192), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 110/237 (46%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ K + ++EI+++DDGS D + ++ + Q G
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTKACESLGKEYEILLIDDGSSDNSAHMLVEASQAEGSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|B7NNT3|ARNC_ECO7I Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC) GN=arnC
PE=3 SV=1
Length = 322
Score = 77.8 bits (190), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ K + ++EI+++DDGS D + ++ Q G
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTKACESLGKEYEILLIDDGSSDNSAHMLVDASQAEGSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|Q57M56|ARNC_SALCH Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella choleraesuis (strain SC-B67) GN=arnC PE=3
SV=1
Length = 327
Score = 77.8 bits (190), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDVD--FEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLSKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|B5RCC3|ARNC_SALG2 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella gallinarum (strain 287/91 / NCTC 13346)
GN=arnC PE=3 SV=1
Length = 327
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTAACESLGKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|B5R271|ARNC_SALEP Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella enteritidis PT4 (strain P125109) GN=arnC
PE=3 SV=1
Length = 327
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTAACESLGKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|B5FNT8|ARNC_SALDC Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella dublin (strain CT_02021853) GN=arnC PE=3
SV=1
Length = 327
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTAACESLGKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|B5BCP7|ARNC_SALPK Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella paratyphi A (strain AKU_12601) GN=arnC
PE=3 SV=1
Length = 327
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTAACESLGKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|Q5PNA5|ARNC_SALPA Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42)
GN=arnC PE=3 SV=1
Length = 327
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTAACESLGKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|O52324|ARNC_SALTY Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC
700720) GN=arnC PE=2 SV=1
Length = 327
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|B4TPI1|ARNC_SALSV Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella schwarzengrund (strain CVM19633) GN=arnC
PE=3 SV=1
Length = 327
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|B4TBG5|ARNC_SALHS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella heidelberg (strain SL476) GN=arnC PE=3
SV=1
Length = 327
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|B5EZH7|ARNC_SALA4 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella agona (strain SL483) GN=arnC PE=3 SV=1
Length = 327
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|Q8Z541|ARNC_SALTI Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella typhi GN=arnC PE=3 SV=1
Length = 327
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|A9N5B3|ARNC_SALPB Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
GN=arnC PE=3 SV=1
Length = 327
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|B4SYX0|ARNC_SALNS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella newport (strain SL254) GN=arnC PE=3 SV=1
Length = 327
Score = 77.4 bits (189), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|C0Q070|ARNC_SALPC Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Salmonella paratyphi C (strain RKS4594) GN=arnC PE=3
SV=1
Length = 327
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 107/235 (45%), Gaps = 14/235 (5%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + +EI+++DDGS D + E++ + Q +
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKAWEILLIDDGSSDSSAELMVKASQ-EADS 67
Query: 68 RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127
I+ + G A + G H SG ++ +DADL + P+ +P + K E G +V
Sbjct: 68 HIISILLNRNYGQHAAIMAGFSHVSGDLIITLDADLQNPPEEIPRLVAKADE-GFDVVGT 126
Query: 128 TRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSK 187
R R +L RK S+ N+L Q + D R Y++ ++ D + C +
Sbjct: 127 VRQNRQD-----SLFRKSASKIINLLIQRTTGKAMGDYGCMLRAYRRPII-DTMLRCHER 180
Query: 188 GYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 181 STFIPILANIFARRA----TEIPVHHAEREFGDSKYSFMRLINLMYDLVTCLTTT 231
>sp|Q1R9G1|ARNC_ECOUT Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain UTI89 / UPEC) GN=arnC PE=3
SV=1
Length = 322
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q G
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAHMLVEASQAEGSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|Q8FFM2|ARNC_ECOL6 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 /
UPEC) GN=arnC PE=3 SV=1
Length = 322
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q G
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAHMLVEASQAEGSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|Q0TFI8|ARNC_ECOL5 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=arnC PE=3 SV=1
Length = 322
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q G
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAHMLVEASQAEGSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|A1ADA6|ARNC_ECOK1 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O1:K1 / APEC GN=arnC PE=3 SV=1
Length = 322
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q G
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAHMLVEASQAEGSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|B7MXT5|ARNC_ECO81 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O81 (strain ED1a) GN=arnC PE=3 SV=1
Length = 322
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q G
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAHMLVEASQAEGSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|B7MG21|ARNC_ECO45 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=arnC
PE=3 SV=1
Length = 322
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q G
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTAACESLGKEYEILLIDDGSSDNSAHMLVEASQAEGSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|B7N5L9|ARNC_ECOLU Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
GN=arnC PE=3 SV=1
Length = 322
Score = 76.6 bits (187), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 109/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ K + ++EI+++DDGS D + ++ + Q
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTKACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|C5BDQ5|ARNC_EDWI9 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Edwardsiella ictaluri (strain 93-146) GN=arnC PE=3
SV=1
Length = 325
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 12 SIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGEDRI 69
S++IP YNE+ +++ ++ + +EI++VDDGS D + E++++ Q G R+
Sbjct: 11 SVVIPVYNEQDSLSELLKRTIAACDSMGKQYEIVLVDDGSSDRSAEILREAAQRPGS-RV 69
Query: 70 LLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTR 129
+ + G +A + G H G V+ +DADL + P+ +P ++ + G +V GT
Sbjct: 70 VAVLLNRNYGQHSAIMAGFNHIKGDLVITLDADLQNPPEEIPRLVEAA-DQGYDVV-GT- 126
Query: 130 YVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGY 189
+R W R+ SR N L Q +SD R Y+ SV++ ++ +
Sbjct: 127 -IRQDRQDSW--FRRRASRLINGLIQRTTGKSMSDYGCMLRAYRSSVIKAMLHCHERSTF 183
Query: 190 VFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + A E+P+ +R G SK G +++ + L+ L TT
Sbjct: 184 I-----PILANSFARRTIEIPVKHAEREHGESKYGLMKLINLMYDLVTCLTTT 231
>sp|A1JPP5|ARNC_YERE8 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Yersinia enterocolitica serotype O:8 / biotype 1B
(strain 8081) GN=arnC PE=3 SV=1
Length = 327
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 111/244 (45%), Gaps = 15/244 (6%)
Query: 1 MEETNKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVD--FEIIVVDDGSPDGTQEVVK 58
M E+ K K K SI+IP YNE+ ++ +++ + + +EII+VDDGS D + E++
Sbjct: 1 MSESEKIK-KVSIVIPVYNEQESLPILIERTSAACKLLTQPYEIILVDDGSSDNSAELLT 59
Query: 59 QLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQL 118
E I+ + G +A + G SG ++ +DADL + P+ +P +
Sbjct: 60 AAAN-EPESHIIAVLLNRNYGQHSAIMAGFNQVSGDLIITLDADLQNPPEEIPRLVSVA- 117
Query: 119 ETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLE 178
E G +V R R +L RK SR N++ Q + D R Y++ ++E
Sbjct: 118 EEGYDVVGTVRAHRQD-----SLFRKTASRMINMMIQRATGKSMGDYGCMLRAYRRHIVE 172
Query: 179 DVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYL 238
++ C + + A R E+ + +R FG SK +++ + L+
Sbjct: 173 AML-HCHERSTFIPILANTFARRT----TEITVHHAEREFGDSKYSLMKLINLMYDLITC 227
Query: 239 LITT 242
L TT
Sbjct: 228 LTTT 231
>sp|Q45539|CSBB_BACSU Putative glycosyltransferase CsbB OS=Bacillus subtilis (strain 168)
GN=csbB PE=2 SV=1
Length = 329
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 101/222 (45%), Gaps = 15/222 (6%)
Query: 12 SIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGEDRI 69
SIIIP+YNE N+ LI + K +++ D+EI ++DGS D T + +K L R+
Sbjct: 7 SIIIPSYNEGYNVKLIHESLKKEFKNIHYDYEIFFINDGSVDDTLQQIKDLAATCS--RV 64
Query: 70 LLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTR 129
+ G A + G +H G V++MDADL HP YL K E G V R
Sbjct: 65 KYISFSRNFGKEAAILAGFEHVQGEAVIVMDADL-QHPTYLLKEFIKGYEEGYDQVIAQR 123
Query: 130 YVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGY 189
R G +L+ + + N + L GV D FRL + + ++ +S+G
Sbjct: 124 N-RKGDSFVRSLLSSMYYKFINKAVEVDLRDGVGD----FRLLSRQAVNALLK--LSEGN 176
Query: 190 VFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEY 231
F + C G+ + V V+R G+SK S + Y
Sbjct: 177 RFSKGLF---CWIGFDQKIVFYENVERKNGTSKWSFSSLFNY 215
>sp|D4GUA0|AGLD_HALVD Glycosyltransferase AglD OS=Haloferax volcanii (strain ATCC 29605 /
DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM
B-1768 / DS2) GN=aglD PE=1 SV=1
Length = 624
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 91/208 (43%), Gaps = 7/208 (3%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV----DFEIIVVDDGSPDGTQEVVKQLQQLYG 65
+ S+++P YNE I V + + L FE+IV +DG D T E+ +L
Sbjct: 18 EVSVVLPAYNEARTIENTVRVTVETLESFLPADAFEVIVAEDGCDDETPEIADRLAA--E 75
Query: 66 EDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
+DRI +LG G A + A G +V D DL+ ++L +++
Sbjct: 76 DDRIRHYHSDDRLGRGGALERAFEAARGDTLVYFDTDLATDMRHLEELVERVRSGEYDAA 135
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
TG+R++ V R + SR N L + L + D F+ + + E +
Sbjct: 136 TGSRWM-PDRVADRPRKRGVPSRAYNGLVRLFLRSDLRDHQCGFKAFSREAFEALRDDVE 194
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITF 213
+ + EM+VRA R G+ + E P+ +
Sbjct: 195 DNHWFWDTEMLVRAQRAGFRVAEFPVDW 222
>sp|A4WAM4|ARNC_ENT38 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Enterobacter sp. (strain 638) GN=arnC PE=3 SV=1
Length = 327
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 109/238 (45%), Gaps = 18/238 (7%)
Query: 9 NKYSIIIPTYNERLNIALIVYLIFK--HLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGE 66
+K S++IP YNE+ ++ ++ L D+EI++VDDGS D + ++ + G
Sbjct: 8 HKVSVVIPVYNEQESLPELIRRTTAACELLGKDYEILLVDDGSSDESASMLSDAAEEPGS 67
Query: 67 D--RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASI 124
+LL + G A + G H +G +V +DADL + P+ +P + K E G +
Sbjct: 68 HIVAVLLN---RNYGQHNAIMAGFSHVTGDLIVTLDADLQNPPEEIPRLVAKADE-GYDV 123
Query: 125 VTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSC 184
V GT VR W RK SR N L Q+ + D R Y++ ++ D + C
Sbjct: 124 V-GT--VRQNRQDTW--FRKRASRLINRLIQSTTGKAMGDYGCMLRAYRRHII-DAMLHC 177
Query: 185 VSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ F + RK E+P+ +R FG SK ++ + L+ L TT
Sbjct: 178 HERS-TFIPILANTFARKAI---EIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|Q58619|Y1222_METJA Uncharacterized protein MJ1222 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1222 PE=4 SV=1
Length = 243
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 111/238 (46%), Gaps = 17/238 (7%)
Query: 7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFE-IIVVDDGSPDGTQEVVKQLQQLYG 65
NK++ +++P +NE I + K+L+ ++ I+VVDDGS D T E+ K+
Sbjct: 15 NKDEIFVVVPAFNEEKMIGETL----KNLKKEGYKNIVVVDDGSMDKTSEIAKK------ 64
Query: 66 EDRILLRPRPKKLGLGTAYIHGLKHA---SGSFVVIMDADLSHHPKYLPSFIKKQLETGA 122
E I+ R + GLG A G+K A ++ DAD HHPK + +K L G
Sbjct: 65 EGVIVCRHILNR-GLGGALGTGIKCALLYKPKIIITFDADGQHHPKDVEKVVKPVLFEGY 123
Query: 123 SIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVIS 182
+ G+R + + L++++ + G N + + V+D R + + +I
Sbjct: 124 DMAIGSRMMDKNELKNMPLVKRIGNFGLNFITYLMGGYFVTDSQSGLRAFSYEAAKKIIG 183
Query: 183 SCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLI 240
S Y E I+ A + G ++EVPI + + S+ G+ ++ K L L++
Sbjct: 184 DLKSDRYEVSSEFIILAKKHGLKLKEVPIKTIYTEYSMSR--GTNVITGFKILFKLIM 239
>sp|Q3YZV2|ARNC_SHISS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Shigella sonnei (strain Ss046) GN=arnC PE=3 SV=1
Length = 322
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|Q31YK3|ARNC_SHIBS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Shigella boydii serotype 4 (strain Sb227) GN=arnC
PE=3 SV=1
Length = 322
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|B6I7J7|ARNC_ECOSE Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain SE11) GN=arnC PE=3 SV=1
Length = 322
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|P77757|ARNC_ECOLI Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain K12) GN=arnC PE=1 SV=1
Length = 322
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|B1IXT3|ARNC_ECOLC Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=arnC PE=3 SV=1
Length = 322
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|A8A2C1|ARNC_ECOHS Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli O9:H4 (strain HS) GN=arnC PE=3 SV=1
Length = 322
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|B1X8W7|ARNC_ECODH Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain K12 / DH10B) GN=arnC PE=3
SV=1
Length = 322
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|C4ZU96|ARNC_ECOBW Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain K12 / MC4100 / BW2952)
GN=arnC PE=3 SV=1
Length = 322
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
>sp|B7LAR9|ARNC_ECO55 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
OS=Escherichia coli (strain 55989 / EAEC) GN=arnC PE=3
SV=1
Length = 322
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 18/237 (7%)
Query: 10 KYSIIIPTYNERLNIALIVYLIFKHLRDV--DFEIIVVDDGSPDGTQEVVKQLQQLYGED 67
K S++IP YNE+ ++ ++ + ++EI+++DDGS D + ++ + Q
Sbjct: 9 KVSVVIPVYNEQESLPELIRRTTTACESLGKEYEILLIDDGSSDNSAHMLVEASQAENSH 68
Query: 68 --RILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125
ILL + G +A + G H +G ++ +DADL + P+ +P + K E G +V
Sbjct: 69 IVSILLN---RNYGQHSAIMAGFSHVTGDLIITLDADLQNPPEEIPRLVAKADE-GYDVV 124
Query: 126 TGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCV 185
GT VR W RK S+ N L Q + D R Y++ ++ D + C
Sbjct: 125 -GT--VRQNRQDSW--FRKTASKMINRLIQRTTGKAMGDYGCMLRAYRRHIV-DAMLHCH 178
Query: 186 SKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYLLITT 242
+ + + A R E+P+ +R FG SK ++ + L+ L TT
Sbjct: 179 ERSTFIPILANIFARRA----IEIPVHHAEREFGESKYSFMRLINLMYDLVTCLTTT 231
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,197,187
Number of Sequences: 539616
Number of extensions: 3810940
Number of successful extensions: 9892
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 158
Number of HSP's that attempted gapping in prelim test: 9591
Number of HSP's gapped (non-prelim): 216
length of query: 242
length of database: 191,569,459
effective HSP length: 114
effective length of query: 128
effective length of database: 130,053,235
effective search space: 16646814080
effective search space used: 16646814080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)