Query 026146
Match_columns 242
No_of_seqs 156 out of 1672
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 06:39:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026146.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026146hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bcv_A Putative glycosyltransf 100.0 6.7E-37 2.3E-41 234.1 16.2 208 6-220 2-229 (240)
2 1qg8_A Protein (spore coat pol 100.0 8.4E-35 2.9E-39 224.4 11.7 195 9-217 1-214 (255)
3 1xhb_A Polypeptide N-acetylgal 100.0 2.2E-33 7.4E-38 234.5 19.2 215 6-221 26-262 (472)
4 2d7i_A Polypeptide N-acetylgal 100.0 1.6E-33 5.5E-38 239.6 13.6 211 6-219 109-340 (570)
5 2ffu_A Ppgalnact-2, polypeptid 100.0 2.7E-32 9.3E-37 229.3 17.5 208 6-218 63-291 (501)
6 3f1y_A Mannosyl-3-phosphoglyce 100.0 2.5E-32 8.6E-37 220.7 13.7 208 8-218 93-310 (387)
7 4fix_A UDP-galactofuranosyl tr 100.0 3.4E-32 1.2E-36 233.3 14.2 214 6-222 177-422 (657)
8 3ckj_A Putative uncharacterize 100.0 6.2E-31 2.1E-35 209.8 20.0 209 6-218 45-265 (329)
9 2z86_A Chondroitin synthase; G 100.0 2.6E-31 9E-36 229.1 16.6 202 5-220 371-576 (625)
10 2z86_A Chondroitin synthase; G 100.0 8.7E-31 3E-35 225.8 13.5 214 6-222 90-335 (625)
11 4hg6_A Cellulose synthase subu 100.0 3.7E-30 1.3E-34 226.2 17.7 231 6-240 137-392 (802)
12 3l7i_A Teichoic acid biosynthe 100.0 7.3E-33 2.5E-37 242.1 0.0 202 8-215 1-204 (729)
13 2bo4_A Mannosylglycerate synth 99.9 4.3E-25 1.5E-29 178.2 18.7 194 13-212 4-212 (397)
14 2nxv_A ATP synthase subunits r 99.9 1.3E-25 4.3E-30 172.3 14.0 177 7-215 14-202 (249)
15 2fy7_A Beta-1,4-galactosyltran 99.9 3.5E-23 1.2E-27 160.8 6.8 159 7-219 63-235 (287)
16 2zu9_A Mannosyl-3-phosphoglyce 99.8 1E-18 3.5E-23 139.0 18.9 218 9-238 51-330 (394)
17 2wvl_A Mannosyl-3-phosphoglyce 99.7 1.1E-17 3.6E-22 129.7 10.8 147 9-161 53-240 (391)
18 1fo8_A Alpha-1,3-mannosyl-glyc 99.4 7.7E-13 2.6E-17 104.6 8.9 111 9-125 2-134 (343)
19 3lw6_A FI08434P, beta-4-galact 98.7 1.3E-07 4.4E-12 71.4 10.4 151 7-210 49-205 (287)
20 2c0n_A A197; thermophil protei 98.6 5.8E-09 2E-13 74.2 -0.1 114 80-206 37-165 (203)
21 3cu0_A Galactosylgalactosylxyl 97.8 9E-05 3.1E-09 55.9 8.5 101 6-112 18-152 (281)
22 1v84_A Galactosylgalactosylxyl 97.8 0.00013 4.5E-09 54.4 8.3 101 8-114 2-128 (253)
23 2d0j_A Galactosylgalactosylxyl 97.7 0.00022 7.6E-09 53.0 9.1 101 8-114 2-122 (246)
24 3k8d_A 3-deoxy-manno-octuloson 97.6 0.00035 1.2E-08 53.4 9.3 190 8-210 16-241 (264)
25 3oam_A 3-deoxy-manno-octuloson 97.1 0.0067 2.3E-07 45.9 10.8 177 22-210 28-225 (252)
26 3tqd_A 3-deoxy-manno-octuloson 96.9 0.011 3.7E-07 44.8 10.1 191 8-211 7-235 (256)
27 1omz_A Alpha-1,4-N-acetylhexos 96.7 0.002 6.8E-08 49.4 4.7 114 7-126 26-140 (293)
28 1qwj_A Cytidine monophospho-N- 96.4 0.057 2E-06 40.0 11.1 109 9-128 2-131 (229)
29 3st8_A Bifunctional protein GL 96.2 0.065 2.2E-06 44.8 11.5 178 22-211 41-235 (501)
30 1h7e_A 3-deoxy-manno-octuloson 96.1 0.27 9.2E-06 36.6 13.6 95 21-127 27-125 (245)
31 1e5k_A Molybdopterin-guanine d 95.9 0.029 9.9E-07 40.7 7.4 89 22-127 34-125 (201)
32 3ngw_A Molybdopterin-guanine d 95.9 0.051 1.8E-06 39.7 8.7 94 19-128 24-119 (208)
33 1ezi_A CMP-N-acetylneuraminic 95.9 0.084 2.9E-06 39.0 9.8 108 9-127 3-132 (228)
34 3juk_A UDP-glucose pyrophospho 95.6 0.026 8.8E-07 43.3 6.3 94 22-122 34-154 (281)
35 1vgw_A 4-diphosphocytidyl-2C-m 95.5 0.47 1.6E-05 34.8 12.8 91 22-121 35-133 (231)
36 4ecm_A Glucose-1-phosphate thy 95.2 0.12 4E-06 39.3 8.8 175 22-210 56-236 (269)
37 2wee_A MOBA-related protein; u 95.2 0.023 7.8E-07 40.9 4.5 94 21-126 31-128 (197)
38 2waw_A MOBA relate protein; un 95.2 0.027 9.2E-07 40.5 4.8 93 22-126 32-128 (199)
39 3tzt_A Glycosyl transferase fa 95.1 0.19 6.5E-06 38.4 9.5 107 7-115 2-122 (276)
40 2y6p_A 3-deoxy-manno-octuloson 94.9 0.21 7.1E-06 36.9 9.2 87 22-121 28-115 (234)
41 1i52_A 4-diphosphocytidyl-2-C- 94.7 0.14 4.8E-06 37.9 7.9 105 8-121 5-128 (236)
42 3d5n_A Q97W15_sulso; NESG, SSR 94.4 0.017 6E-07 41.8 2.0 90 22-127 29-121 (197)
43 4fce_A Bifunctional protein GL 94.3 0.069 2.4E-06 43.9 5.8 177 22-212 37-221 (459)
44 2ux8_A Glucose-1-phosphate uri 94.0 0.077 2.6E-06 41.0 5.1 56 67-122 106-163 (297)
45 4fcu_A 3-deoxy-manno-octuloson 93.9 0.46 1.6E-05 35.7 9.2 95 21-126 26-126 (253)
46 2qh5_A PMI, ALGA, mannose-6-ph 93.8 0.58 2E-05 36.3 9.9 102 19-127 35-142 (308)
47 2e3d_A UTP--glucose-1-phosphat 93.7 0.21 7.3E-06 38.5 7.2 56 67-122 102-164 (302)
48 1vic_A 3-deoxy-manno-octuloson 93.5 1.1 3.9E-05 33.6 10.9 94 21-127 27-126 (262)
49 1fxo_A Glucose-1-phosphate thy 93.5 0.32 1.1E-05 37.5 7.9 103 16-126 29-134 (293)
50 3pnn_A Conserved domain protei 93.5 0.3 1E-05 37.8 7.7 101 20-127 32-152 (303)
51 1lvw_A Glucose-1-phosphate thy 93.1 0.61 2.1E-05 35.9 8.8 103 15-126 29-135 (295)
52 1hm9_A GLMU, UDP-N-acetylgluco 93.0 0.16 5.3E-06 41.9 5.8 96 21-127 39-137 (468)
53 2dpw_A Hypothetical protein TT 92.6 0.52 1.8E-05 34.8 7.7 87 20-128 31-118 (232)
54 2v0h_A Bifunctional protein GL 92.1 0.29 1E-05 40.1 6.2 88 22-119 34-123 (456)
55 1mc3_A Glucose-1-phosphate thy 92.0 0.54 1.8E-05 36.3 7.2 102 16-126 30-135 (296)
56 3f1c_A Putative 2-C-methyl-D-e 91.5 1.3 4.4E-05 33.0 8.7 95 21-122 32-135 (246)
57 2pa4_A UTP-glucose-1-phosphate 90.6 0.5 1.7E-05 36.9 5.9 55 68-122 106-163 (323)
58 2xwl_A 2-C-methyl-D-erythritol 90.5 2.1 7.1E-05 31.0 8.9 87 21-117 30-118 (223)
59 2yc3_A 2-C-methyl-D-erythritol 90.4 1.4 4.7E-05 32.2 7.9 93 22-122 33-128 (228)
60 1w55_A ISPD/ISPF bifunctional 90.4 1.1 3.7E-05 35.9 7.6 85 22-120 32-117 (371)
61 2vsh_A TARI, 2-C-methyl-D-eryt 90.3 0.63 2.2E-05 34.2 6.0 96 20-122 30-136 (236)
62 2j0a_A Beta-1,3-N-acetylglucos 90.0 0.23 7.9E-06 38.0 3.4 109 91-210 92-210 (280)
63 3rsb_A Adenosylcobinamide-phos 89.9 0.091 3.1E-06 37.7 1.0 99 20-126 26-131 (196)
64 3brk_X Glucose-1-phosphate ade 89.7 1.9 6.6E-05 34.9 8.8 99 22-128 45-160 (420)
65 2e8b_A Probable molybdopterin- 89.6 1.8 6.3E-05 31.0 7.8 46 69-114 72-120 (201)
66 3q80_A 2-C-methyl-D-erythritol 88.4 1.6 5.4E-05 32.3 6.9 94 21-126 35-133 (231)
67 1yp2_A Glucose-1-phosphate ade 88.1 6.6 0.00023 32.0 11.1 99 22-127 53-169 (451)
68 1tzf_A Glucose-1-phosphate cyt 87.7 4.1 0.00014 30.2 9.0 49 76-125 104-153 (259)
69 4evw_A Nucleoside-diphosphate- 85.7 4.7 0.00016 30.1 8.2 89 21-112 30-125 (255)
70 1g9r_A Glycosyl transferase; a 81.7 3.3 0.00011 32.1 6.1 93 20-115 11-117 (311)
71 2xme_A CTP-inositol-1-phosphat 80.5 0.68 2.3E-05 34.1 1.7 84 22-115 46-130 (232)
72 2i5e_A Hypothetical protein MM 80.5 5.6 0.00019 28.6 6.7 54 69-129 67-121 (211)
73 1ll2_A Glycogenin-1; protein-s 80.3 4.9 0.00017 31.5 6.6 19 90-108 92-110 (333)
74 2gak_A Beta-1,6-N-acetylglucos 76.6 15 0.00052 29.4 8.6 103 8-116 83-198 (391)
75 3u2u_A Glycogenin-1, GN-1, GN1 74.8 7.1 0.00024 29.4 5.9 17 92-108 95-111 (263)
76 2x65_A Mannose-1-phosphate gua 72.2 11 0.00037 29.5 6.6 106 15-127 28-139 (336)
77 3cgx_A Putative nucleotide-dip 68.8 32 0.0011 25.4 12.4 57 69-128 77-137 (242)
78 2px7_A 2-C-methyl-D-erythritol 68.3 5.6 0.00019 29.2 4.0 51 69-121 84-135 (236)
79 1jyk_A LICC protein, CTP:phosp 63.5 13 0.00044 27.6 5.2 81 22-114 57-139 (254)
80 1vpa_A 2-C-methyl-D-erythritol 60.1 12 0.0004 27.2 4.4 92 21-121 41-136 (234)
81 2icy_A Probable UTP-glucose-1- 51.5 1E+02 0.0035 25.4 9.1 106 19-128 106-247 (469)
82 2ggo_A 401AA long hypothetical 47.4 11 0.00038 30.0 2.6 82 20-115 30-113 (401)
83 4b4t_W RPN10, 26S proteasome r 40.8 81 0.0028 23.8 6.3 48 77-124 84-139 (268)
84 4b4k_A N5-carboxyaminoimidazol 40.2 94 0.0032 21.8 6.4 54 7-65 21-74 (181)
85 3v7e_A Ribosome-associated pro 38.1 41 0.0014 20.0 3.6 45 25-74 17-61 (82)
86 4ds3_A Phosphoribosylglycinami 38.0 1.1E+02 0.0038 22.0 7.9 95 10-111 7-105 (209)
87 3rht_A (gatase1)-like protein; 37.1 61 0.0021 24.3 5.1 72 41-119 6-78 (259)
88 4fak_A Ribosomal RNA large sub 37.1 1E+02 0.0034 21.2 9.7 96 7-121 3-103 (163)
89 3j21_Z 50S ribosomal protein L 37.0 73 0.0025 19.6 4.8 53 24-81 20-73 (99)
90 2ale_A SNU13, NHP2/L7AE family 36.8 64 0.0022 21.4 4.6 79 25-117 38-117 (134)
91 1o6d_A Hypothetical UPF0247 pr 34.3 1.1E+02 0.0039 21.0 7.2 92 9-124 3-97 (163)
92 1s4n_A Glycolipid 2-alpha-mann 31.4 85 0.0029 24.6 5.1 117 7-126 25-179 (348)
93 3h7c_X Agmatine deiminase; str 31.0 55 0.0019 26.2 4.1 33 12-46 320-352 (383)
94 2fqx_A Membrane lipoprotein TM 30.6 1.8E+02 0.006 22.1 10.5 90 8-102 4-95 (318)
95 8abp_A L-arabinose-binding pro 30.2 1.7E+02 0.0057 21.6 8.1 54 9-63 3-56 (306)
96 3kcq_A Phosphoribosylglycinami 28.8 1.6E+02 0.0056 21.2 6.9 93 8-111 8-101 (215)
97 2rli_A SCO2 protein homolog, m 28.3 52 0.0018 22.0 3.3 34 38-72 63-96 (171)
98 3hvm_A Agmatine deiminase; hyd 27.6 81 0.0028 24.6 4.5 31 12-46 281-311 (330)
99 2ggt_A SCO1 protein homolog, m 27.1 63 0.0022 21.3 3.6 33 39-72 61-93 (164)
100 1wd5_A Hypothetical protein TT 26.7 1.7E+02 0.0058 20.7 7.0 61 39-104 120-181 (208)
101 2l82_A Designed protein OR32; 26.6 1.2E+02 0.0043 19.1 7.7 96 20-126 11-108 (162)
102 4grd_A N5-CAIR mutase, phospho 25.3 1.7E+02 0.006 20.3 6.7 54 6-64 10-63 (173)
103 3iz5_f 60S ribosomal protein L 24.8 92 0.0032 19.8 3.7 69 24-102 31-100 (112)
104 2d00_A V-type ATP synthase sub 24.3 1.1E+02 0.0037 19.4 3.9 40 19-61 29-68 (109)
105 2xzm_U Ribosomal protein L7AE 23.9 1.5E+02 0.0053 19.2 5.2 47 24-75 29-76 (126)
106 1xkn_A Putative peptidyl-argin 22.8 96 0.0033 24.5 4.1 32 12-46 295-326 (355)
107 3s99_A Basic membrane lipoprot 22.8 2.8E+02 0.0094 21.7 9.0 89 9-102 27-119 (356)
108 3lor_A Thiol-disulfide isomera 22.3 1.7E+02 0.0057 19.0 9.0 77 27-104 52-132 (160)
109 2i5k_A UTP--glucose-1-phosphat 22.0 3.4E+02 0.012 22.4 13.0 105 20-128 120-260 (488)
110 1zbr_A AAQ65385, conserved hyp 22.0 84 0.0029 24.7 3.7 32 12-46 286-317 (349)
111 1sn9_A BBAT, tetrameric beta-B 21.8 26 0.0009 15.1 0.4 15 15-29 4-18 (26)
112 2cu2_A Putative mannose-1-phos 21.7 1.2E+02 0.0043 23.4 4.7 92 16-117 30-125 (337)
113 2i4r_A V-type ATP synthase sub 21.5 61 0.0021 20.3 2.3 51 20-73 37-87 (102)
114 3h75_A Periplasmic sugar-bindi 21.3 2.7E+02 0.0093 21.1 8.5 92 8-104 3-97 (350)
115 3fw2_A Thiol-disulfide oxidore 21.3 1.7E+02 0.0059 18.8 6.2 73 26-104 55-128 (150)
116 3h11_A CAsp8 and FADD-like apo 21.3 2.6E+02 0.0089 21.0 6.2 48 8-62 42-90 (272)
117 3ixr_A Bacterioferritin comigr 21.2 1.5E+02 0.005 20.2 4.6 68 29-104 75-152 (179)
118 3da8_A Probable 5'-phosphoribo 21.0 2.4E+02 0.0082 20.3 7.9 94 11-112 13-109 (215)
119 3raz_A Thioredoxin-related pro 20.7 1.3E+02 0.0044 19.4 4.1 71 27-104 45-117 (151)
120 2b7k_A SCO1 protein; metalloch 20.5 2E+02 0.007 19.9 5.3 28 38-65 77-104 (200)
121 1jql_B DNA polymerase III, del 20.5 1.9E+02 0.0064 18.9 7.4 104 14-119 20-132 (140)
122 3bfj_A 1,3-propanediol oxidore 20.3 2.4E+02 0.0083 22.2 6.2 9 41-49 35-43 (387)
No 1
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=100.00 E-value=6.7e-37 Score=234.11 Aligned_cols=208 Identities=20% Similarity=0.207 Sum_probs=150.7
Q ss_pred CCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146 6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI 85 (242)
Q Consensus 6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n 85 (242)
..+|+||||||+||+++.|.+||+|+.+|+. +++|||||||||+|+|.++++++.+.++ ++++++ .+|.|.+.|+|
T Consensus 2 ~~~p~vsViIp~yn~~~~l~~~l~Sl~~q~~-~~~eiIvvDd~S~d~t~~~~~~~~~~~~--~i~~i~-~~n~G~~~a~N 77 (240)
T 3bcv_A 2 SLIPKVSVIVPIYNVEKYLDQCVQALLAQTL-SDIEIILIDDESPDNCPKICDDYAAQYP--NIKVIH-KKNAGLGMACN 77 (240)
T ss_dssp -CCCSEEEEEEESSCTTTHHHHHHHHHTCSS-SSEEEEEEECCCSSSHHHHHHHHHHHCS--SEEEEE-CCCCCHHHHHH
T ss_pred CCCCcEEEEEecCCCHHHHHHHHHHHHhCcC-CCeEEEEEECCCCcCHHHHHHHHHhhCC--CEEEEE-CCCCChHHHHH
Confidence 3468999999999999999999999999976 5899999999999999999999988866 688887 46999999999
Q ss_pred HHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCcc---C-------chhhHHHHHhHHHHHHH
Q 026146 86 HGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVH---G-------WNLMRKLTSRGANVLAQ 155 (242)
Q Consensus 86 ~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~---~-------~~~~~~~~~~~~~~~~~ 155 (242)
.|++.|+|+||+|+|+|+.++|++|+.+++.+++++.+++++.......... . ...... ...... ..
T Consensus 78 ~g~~~a~g~~i~~lD~Dd~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~ 154 (240)
T 3bcv_A 78 SGLDVATGEYVAFCDSDDYVDSDMYMTMYNVAQKYTCDAVFTGLKRITMAGIPTGTVTHQKEFKLYKNK--NEIHTL-LK 154 (240)
T ss_dssp HHHHHCCSSEEEECCTTCCCCTTHHHHHHHHHHHHTCSEEEC--------------------CEEECSH--HHHHHH-HG
T ss_pred HHHHHcCCCEEEEECCCCcCCHHHHHHHHHHHHhcCCCEEEEeeEEEccCCccccccccccccccccCH--HHHHHH-HH
Confidence 9999999999999999999999999999999987788888765433221110 0 000000 000011 11
Q ss_pred HHhCCC-------ccccccchhhcchHHHHHhh-hcccCC-CcccchHHHHHHHHcCCceEEeeeeeee-ccCCC
Q 026146 156 TLLWPG-------VSDLTGSFRLYKKSVLEDVI-SSCVSK-GYVFQMEMIVRACRKGYHIEEVPITFVD-RVFGS 220 (242)
Q Consensus 156 ~~~~~~-------~~~~~g~~~~~rr~~~~~~~-~~~~~~-~~~~d~~~~~~~~~~g~~i~~~p~~~~~-~~~~~ 220 (242)
...... .....++++++||++++++| +|++.. .++||++|++|+.+.|+++.++|....+ |.++.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~eD~~~~~r~~~~g~~i~~~~~~~~~yr~~~~ 229 (240)
T 3bcv_A 155 DLIASDPYAREERAIQVSAKVVLYRRNLIEKKHLRFVSERILPSEDLIFNVDVLANSNIVCVLPQTFYNYRTNPI 229 (240)
T ss_dssp GGTSSCHHHHHHHHHHHTCSCEEEEHHHHHHTTCCCCCTTTCTTHHHHHHHHHHTTCSCEEECC-----------
T ss_pred HHhhcchhhccccccccchhheeeeHHHHHHcCCccCCCCCccCCCHHHHHHHHHhCCEEEEECCCeEEEEeCCC
Confidence 111111 11234677799999999998 787654 3579999999999999999999976654 44433
No 2
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=100.00 E-value=8.4e-35 Score=224.44 Aligned_cols=195 Identities=15% Similarity=0.169 Sum_probs=154.7
Q ss_pred CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC--------CCcch
Q 026146 9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP--------KKLGL 80 (242)
Q Consensus 9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~--------~~~g~ 80 (242)
|+||||||+||+++.|.++|+|+.+|+. +++|||||||||+|+|.++++++.+ . .+++++..+ +|.|.
T Consensus 1 p~vSViIp~yn~~~~l~~~l~Sl~~q~~-~~~eiivvDd~S~d~t~~~~~~~~~-~--~~i~~i~~~~~~~~~~~~n~G~ 76 (255)
T 1qg8_A 1 PKVSVIMTSYNKSDYVAKSISSILSQTF-SDFELFIMDDNSNEETLNVIRPFLN-D--NRVRFYQSDISGVKERTEKTRY 76 (255)
T ss_dssp CCEEEEEEESSCTTTHHHHHHHHHTCSC-CCEEEEEEECSCCHHHHHHHGGGGG-S--TTEEEEECCCCSHHHHHSSCHH
T ss_pred CeEEEEEEcCCCHHHHHHHHHHHHhccC-CceEEEEEECCCCchHHHHHHHHhh-c--CCEEEEecccccccccccccCH
Confidence 5799999999999999999999999976 5899999999999999999998765 2 479999988 89999
Q ss_pred HHHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhc-CCcEEEEEEEee--cCCcc-CchhhHHHHHhHHHHHHHH
Q 026146 81 GTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLET-GASIVTGTRYVR--SGGVH-GWNLMRKLTSRGANVLAQT 156 (242)
Q Consensus 81 ~~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~-~~~~v~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~ 156 (242)
+.|+|.|++.|+|+||+|+|+|+.++|++++.+++.+++. +++++.+..... +.... ......... .
T Consensus 77 ~~a~N~gi~~a~g~~i~~lD~Dd~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~---------~ 147 (255)
T 1qg8_A 77 AALINQAIEMAEGEYITYATDDNIYMPDRLLKMVRELDTHPEKAVIYSASKTYHLNENRDIVKETVRPAA---------Q 147 (255)
T ss_dssp HHHHHHHHHHCCCSEEEEEETTEEECTTHHHHHHHHHHHCTTCCEEEEEEEEEEEC---CEEEEEEECCC---------S
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCccChHHHHHHHHHHHhCCCceEEEeceEEEEeCCCCcchhhccCchH---------H
Confidence 9999999999999999999999999999999999999865 788888765543 22100 000000000 0
Q ss_pred HhCCCccccccchhhcchHHHHHhh-hc------ccCCCcccchHHHHHHHHcCCceEEeeeeeeecc
Q 026146 157 LLWPGVSDLTGSFRLYKKSVLEDVI-SS------CVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRV 217 (242)
Q Consensus 157 ~~~~~~~~~~g~~~~~rr~~~~~~~-~~------~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~ 217 (242)
..........++++++||++++++| +| .+...++||++|+.++.+.| ++.++|...+++.
T Consensus 148 ~~~~~~~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~~~~eD~~~~~r~~~~g-~~~~~~~~~~~~r 214 (255)
T 1qg8_A 148 VTWNAPCAIDHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVNHFY-PFYPLDEELDLNY 214 (255)
T ss_dssp CBSCCTTTSCGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHTTTC-CBEEEEEEEEEEE
T ss_pred HHHhhcCCCccceEEEEHHHHHhhcccccccccCCcccchHHHHHHHHHHHHhC-CEEEecCcEEEEE
Confidence 0112234466788899999999998 77 56667789999999999887 7999997765433
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=100.00 E-value=2.2e-33 Score=234.52 Aligned_cols=215 Identities=16% Similarity=0.172 Sum_probs=162.9
Q ss_pred CCCCcEEEEEeCcccc-ccHHHHHHHHHhhhcCC-CeEEEEEeCCCCCC-hHHHHHHHHHHhCCCcEEEeeCCCCcchHH
Q 026146 6 KNKNKYSIIIPTYNER-LNIALIVYLIFKHLRDV-DFEIIVVDDGSPDG-TQEVVKQLQQLYGEDRILLRPRPKKLGLGT 82 (242)
Q Consensus 6 ~~~~~isiiip~~n~~-~~l~~~l~sl~~~~~~~-~~eiivvd~~s~d~-t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~ 82 (242)
..+|+||||||+||++ +.|.++|+|+.+|+.+. .+|||||||+|+|+ |.++++++.+.++ .++++++.++|.|++.
T Consensus 26 ~~~p~vSVIIp~yN~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~~~~~~~-~~v~vi~~~~n~G~~~ 104 (472)
T 1xhb_A 26 DNLPTTSVVIVFHNEAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLESYVKKLK-VPVHVIRMEQRSGLIR 104 (472)
T ss_dssp SCCCCEEEEEEESSCCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHHHHHSSS-SCEEEEECSSCCCHHH
T ss_pred cCCCCeEEEEEeCCCCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHHHHHHCC-CcEEEEECCCCCChHH
Confidence 3578999999999999 99999999999997642 37999999999995 9999999887654 2699999999999999
Q ss_pred HHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccC-------------chhhHHHHHhH
Q 026146 83 AYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHG-------------WNLMRKLTSRG 149 (242)
Q Consensus 83 a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~-------------~~~~~~~~~~~ 149 (242)
|+|.|++.|++|||+|+|+|++++|+||+.+++.+++++..++++.....+.+... +..........
T Consensus 105 a~N~g~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (472)
T 1xhb_A 105 ARLKGAAVSRGQVITFLDAHCECTAGWLEPLLARIKHDRRTVVCPIIDVISDDTFEYMAGSDMTYGGFNWKLNFRWYPVP 184 (472)
T ss_dssp HHHHHHHHCCSSEEEEEESSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECSSSCCEECCCTTEEEEECTTCCEEEEECC
T ss_pred HHHHHHHhccCCeEEEECCCeEeCccHHHHHHHHHHhCCCEEEEeeeeeEcCCCceeccCCCcccceeeccceeecccCC
Confidence 99999999999999999999999999999999999876666666544332221110 00000000000
Q ss_pred HHHHHHHH----hCCCccccccchhhcchHHHHHhhhcccCCCc--ccchHHHHHHHHcCCceEEeeeeeeeccCCCc
Q 026146 150 ANVLAQTL----LWPGVSDLTGSFRLYKKSVLEDVISSCVSKGY--VFQMEMIVRACRKGYHIEEVPITFVDRVFGSS 221 (242)
Q Consensus 150 ~~~~~~~~----~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~--~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s 221 (242)
........ .........|++++++|++|+++|+|++.... +||.||++|+.+.|+++.++|.+.++|..+.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~~ 262 (472)
T 1xhb_A 185 QREMDRRKGDRTLPVRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKA 262 (472)
T ss_dssp HHHHHHTTTCTTSCEECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC---
T ss_pred HHHHhcccCCCCCcccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEEccCc
Confidence 00000000 01224457788889999999999999876553 79999999999999999999998888776655
No 4
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=100.00 E-value=1.6e-33 Score=239.55 Aligned_cols=211 Identities=16% Similarity=0.157 Sum_probs=160.1
Q ss_pred CCCCcEEEEEeCcccc-ccHHHHHHHHHhhhcCC-CeEEEEEeCCCCCCh-HHHHHHHHHHhCCCcEEEeeCCCCcchHH
Q 026146 6 KNKNKYSIIIPTYNER-LNIALIVYLIFKHLRDV-DFEIIVVDDGSPDGT-QEVVKQLQQLYGEDRILLRPRPKKLGLGT 82 (242)
Q Consensus 6 ~~~~~isiiip~~n~~-~~l~~~l~sl~~~~~~~-~~eiivvd~~s~d~t-~~~l~~~~~~~~~~~~~~~~~~~~~g~~~ 82 (242)
..+|+||||||+||++ +.|.++|+|+.+|+... .+|||||||+|+|+| .++++++.+.++ ++++++.++|.|++.
T Consensus 109 ~~~P~vSVIIp~yNe~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~--~v~vi~~~~n~G~~~ 186 (570)
T 2d7i_A 109 ETLPNTSIIIPFHNEGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFP--SVRILRTKKREGLIR 186 (570)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTST--TEEEEECSSCCCHHH
T ss_pred CCCCCeEEEEEECCCCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCC--eEEEEECCCCCCHHH
Confidence 3578999999999998 99999999999997642 359999999999999 899999887764 799999999999999
Q ss_pred HHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEe-ecCCccCchh-----hHHHHHhH--HHH--
Q 026146 83 AYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYV-RSGGVHGWNL-----MRKLTSRG--ANV-- 152 (242)
Q Consensus 83 a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~-~~~~~~~~~~-----~~~~~~~~--~~~-- 152 (242)
|+|.|++.|++|||+|+|+|++++|+||+.+++.+.+++.. ++++... .+........ ........ ...
T Consensus 187 A~N~G~~~A~gd~i~fLD~D~~~~p~~L~~ll~~l~~~~~~-vv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (570)
T 2d7i_A 187 TRMLGASVATGDVITFLDSHCEANVNWLPPLLDRIARNRKT-IVCPMIDVIDHDDFRYETQAGDAMRGAFDWEMYYKRIP 265 (570)
T ss_dssp HHHHHHHHCCSSEEEECCSSEEECTTCSHHHHHHHHHCTTE-EEEEEEEEECTTTCCEECCTTSSCEEEECTTCCEEEEC
T ss_pred HHHHHHHhcCCCEEEEEcCCccccccHHHHHHHHHHhCCCE-EEeeeeeccCCCchhhccccCCcccccccccccccccc
Confidence 99999999999999999999999999999999999875544 4444332 2221100000 00000000 000
Q ss_pred ------HHHHHhCCCccccccchhhcchHHHHHhhhcccCCCc--ccchHHHHHHHHcCCceEEeeeeeeeccCC
Q 026146 153 ------LAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGY--VFQMEMIVRACRKGYHIEEVPITFVDRVFG 219 (242)
Q Consensus 153 ------~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~--~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~ 219 (242)
..............|+++++||++|+++|+|++.... +||+||++|+.+.|+++.++|.+.++|.+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r 340 (570)
T 2d7i_A 266 IPPELQKADPSDPFESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYR 340 (570)
T ss_dssp CCTTTCCSSTTSCEECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCC
T ss_pred cchhhhccCCCcceecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEcc
Confidence 0000001123456789999999999999999775544 799999999999999999999988877543
No 5
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=100.00 E-value=2.7e-32 Score=229.34 Aligned_cols=208 Identities=18% Similarity=0.188 Sum_probs=155.2
Q ss_pred CCCCcEEEEEeCccccc-cHHHHHHHHHhhhcCC-CeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHH
Q 026146 6 KNKNKYSIIIPTYNERL-NIALIVYLIFKHLRDV-DFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTA 83 (242)
Q Consensus 6 ~~~~~isiiip~~n~~~-~l~~~l~sl~~~~~~~-~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a 83 (242)
..+|+||||||+||+++ .|.++|+|+.+|+... .+|||||||||+|+|.+.+ .+..+ ++++++.++|.|++.|
T Consensus 63 ~~~p~vSVIIp~yN~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~---~~~~~--~v~vi~~~~n~G~~~A 137 (501)
T 2ffu_A 63 VDLPATSVVITFHNEARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGAL---LGKIE--KVRVLRNDRREGLMRS 137 (501)
T ss_dssp SSCCCEEEEEEESSCCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHG---GGGBT--TEEEEECSSCCHHHHH
T ss_pred cCCCCEEEEEEeCcCcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHH---HhcCC--CEEEEECCCCcCHHHH
Confidence 35789999999999987 9999999999997642 3699999999999985432 23333 7999999999999999
Q ss_pred HHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccC-------------chhhHHHHHhHH
Q 026146 84 YIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHG-------------WNLMRKLTSRGA 150 (242)
Q Consensus 84 ~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~-------------~~~~~~~~~~~~ 150 (242)
+|.|++.|+||||+|+|+|++++|+||+.+++.+++++.++|.+.....+..... +...........
T Consensus 138 ~N~G~~~A~gd~i~flD~D~~~~p~~L~~ll~~~~~~~~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (501)
T 2ffu_A 138 RVRGADAAQAKVLTFLDSHCECNEHWLEPLLERVAEDRTRVVSPIIDVINMDNFQYVGASADLKGGFDWNLVFKWDYMTP 217 (501)
T ss_dssp HHHHHHHCCSSEEEECCSSEEECTTCHHHHHHHHHHCTTEEEEEEEEEECTTTCCEECBCSSEEEEECTTCCEEEEECCH
T ss_pred HHHHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhCCCeEEEeeeccCcCCCceeecCCcccceEeeecCCCccccCCH
Confidence 9999999999999999999999999999999999887776666544322211100 000000000000
Q ss_pred HHHHHH----HhCCCccccccchhhcchHHHHHhhhcccCCCc--ccchHHHHHHHHcCCceEEeeeeeeeccC
Q 026146 151 NVLAQT----LLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGY--VFQMEMIVRACRKGYHIEEVPITFVDRVF 218 (242)
Q Consensus 151 ~~~~~~----~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~--~~d~~~~~~~~~~g~~i~~~p~~~~~~~~ 218 (242)
...... ..........|++++++|++++++|+|++...+ +||.+|++|+.+.|+++.++|.+.++|.+
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~ 291 (501)
T 2ffu_A 218 EQRRSRQGNPVAPIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 291 (501)
T ss_dssp HHHHHTSSCTTSCEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECC
T ss_pred HHHhhccCCCCCcccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEEEc
Confidence 000000 011124456788999999999999999876544 89999999999999999999987776653
No 6
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=99.98 E-value=2.5e-32 Score=220.71 Aligned_cols=208 Identities=18% Similarity=0.166 Sum_probs=153.6
Q ss_pred CCcEEEEEeCccccccHHHHHHHHHhh--hcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146 8 KNKYSIIIPTYNERLNIALIVYLIFKH--LRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI 85 (242)
Q Consensus 8 ~~~isiiip~~n~~~~l~~~l~sl~~~--~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n 85 (242)
.|+||||||+||+++.|.++|+++.++ .....+|||||||||+|+|.++++++........++++..+.|.|++.|+|
T Consensus 93 ~p~vSVVIP~yNe~~~l~~~l~sl~~~l~~~~~~~EIIVVDDgStD~T~~i~~~~~~~v~~~~~~~i~~~~n~G~g~A~n 172 (387)
T 3f1y_A 93 GLTVSAVLPSRNVADTVGGIIDEIHALNERAPLIDQILVVDADSEDGTAGVAASHGAEVYSENELMSGYGDAHGKGDAMW 172 (387)
T ss_dssp TCCEEEEEEESSCTTTHHHHHHHHHHHHHHSCCCSEEEEEECSCSSSHHHHHHHTTCEEEEGGGTTGGGCSCCSHHHHHH
T ss_pred CCeEEEEEEcCCCHHHHHHHHHHHHHHHhcCCCCeEEEEEcCcCCccHHHHHHHhCchhcccceeEecCCccCCHHHHHH
Confidence 589999999999999999999999873 232478999999999999999999873321111222445678999999999
Q ss_pred HHHhhcCCCEEEEEeCCCC-CCCCChHHHHHHHHhc-CCcEEEEEEEeecCC--ccCchhhHHHHHhHHHHHHHHHh--C
Q 026146 86 HGLKHASGSFVVIMDADLS-HHPKYLPSFIKKQLET-GASIVTGTRYVRSGG--VHGWNLMRKLTSRGANVLAQTLL--W 159 (242)
Q Consensus 86 ~g~~~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~-~~~~v~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~ 159 (242)
.|++.|++|||+|+|+|+. ++|++|..+++.+.++ +++++.|.+...... ...............+.+..... .
T Consensus 173 ~G~~~A~gd~i~~lDaD~~~~~p~~L~~l~~~l~~~p~~d~v~G~~~~~~~~~~~~~~~~~g~v~~~~~~~l~~~~~~~l 252 (387)
T 3f1y_A 173 RALSVTRGDLVLYIDADTRDFRPQLAYGVLGPVLEVPGVRFVKAAYRRPFRKGESIEEDGGGRVTELTAKPLFNLFYPEL 252 (387)
T ss_dssp HHTTTCCSSEEEECCTTCSSCCTHHHHTTHHHHHHSTTCCEEEEEEECC-------CCBCCSHHHHHTHHHHHHHHCGGG
T ss_pred HHHHhcCCCEEEEEcCCCCcCCHHHHHHHHHHHHHCCCceEEEEeeccccccccccccccCCchhhhhHHHHHHHHhHhh
Confidence 9999999999999999999 8999999999999765 799999976533211 00001111111111122222111 1
Q ss_pred CCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHH-HHcCCc-eEEeeeeeeeccC
Q 026146 160 PGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRA-CRKGYH-IEEVPITFVDRVF 218 (242)
Q Consensus 160 ~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~-~~~g~~-i~~~p~~~~~~~~ 218 (242)
.++.+..+|++++||++++++ ++ ..+|++|.+++.++ .+.|++ +..+|....+|.+
T Consensus 253 ~~~~d~~sG~~a~rR~~l~~i-~f--~~gyg~e~ell~~~~~~~G~~~I~eVpi~~~~h~~ 310 (387)
T 3f1y_A 253 AGFVQPLAGEFVADRELFCSI-PF--LTGYAVETGIMIDVLKKVGLGAMAQVDLGERQNRH 310 (387)
T ss_dssp TTCSCTTCSCEEEEHHHHTTS-CE--ECSTTHHHHHHHHHHHHHCGGGEEEEEEEECCCCC
T ss_pred ccccccccccEEEEHHHHHhC-CC--CCCcchHHHHHHHHHHhcCCCeEEEEecceeecCC
Confidence 246677889999999999999 44 36788899999998 456997 9999999877654
No 7
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=99.98 E-value=3.4e-32 Score=233.29 Aligned_cols=214 Identities=15% Similarity=0.102 Sum_probs=155.9
Q ss_pred CCCCcEEEEEeCccccccHHHHHHHHHhhhcC--CCeEEEEEeCCCCCC--hHHHHHHHHHHhCCCcEEEeeCCCCcchH
Q 026146 6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPDG--TQEVVKQLQQLYGEDRILLRPRPKKLGLG 81 (242)
Q Consensus 6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~--~~~eiivvd~~s~d~--t~~~l~~~~~~~~~~~~~~~~~~~~~g~~ 81 (242)
...|+||||||+||+.+.|.+||+||.+|+.. ..+|||||||||+|+ +..+.+.+.... .+++++.++ |.|.+
T Consensus 177 ~~~pkVSVVIptYN~~~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD~s~~~~~~e~~~~~~--~~I~vI~~~-N~G~a 253 (657)
T 4fix_A 177 PGTANIAVGIPTFNRPADCVNALRELTADPLVDQVIGAVIVPDQGERKVRDHPDFPAAAARLG--SRLSIHDQP-NLGGS 253 (657)
T ss_dssp CSCCCEEEECCBSSCHHHHHHHHHHHTTSHHHHTTEEEEEEEECSSSCGGGSTTHHHHHHHHG--GGEEEEECC-CCHHH
T ss_pred CCCCeEEEEEEecCCHHHHHHHHHHHHcCccccCCCCEEEEEECcCCCccchHHHHHHHHhcC--CCEEEEECC-CCCHH
Confidence 35689999999999999999999999998652 356999999999984 223333222222 379999988 99999
Q ss_pred HHHHHHHhhc----CCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCc-c-----------CchhhHH-
Q 026146 82 TAYIHGLKHA----SGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGV-H-----------GWNLMRK- 144 (242)
Q Consensus 82 ~a~n~g~~~a----~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~-~-----------~~~~~~~- 144 (242)
+|+|.|++.| .+|||+|+|+|++++|++|+.+++.++..+...++|+........ . ...+...
T Consensus 254 ~a~N~Gl~~A~g~~~~dyIlfLD~D~~~~pd~L~~ll~~l~~~~~~~~vg~~il~~~~~~~~~~~g~~~~~~~~~~~~~~ 333 (657)
T 4fix_A 254 GGYSRVMYEALKNTDCQQILFMDDDIRLEPDSILRVLAMHRFAKAPMLVGGQMLNLQEPSHLHIMGEVVDRSIFMWTAAP 333 (657)
T ss_dssp HHHHHHHHHHHHHCCCSEEEEECSSEEECTHHHHHHHHHHHHBSSCCEEEEEEEETTSTTEECCSCEEEETTTTEEEECT
T ss_pred HHHHHHHHHHHhcCCCCEEEEECCCCccChhHHHHHHHHHHhCCCcEEEEeEEecCCCCceeeecccEeccccccccccc
Confidence 9999999998 468999999999999999999999998765555555443322110 0 0000000
Q ss_pred -------H----HHhHHHHHHHHHhCCCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeee
Q 026146 145 -------L----TSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITF 213 (242)
Q Consensus 145 -------~----~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~ 213 (242)
+ ................+....|+++++||++++++|++++.+.+.||.|||+|+.++|+++.++|.+.
T Consensus 334 ~~~~~~~f~~~~l~~~~~~~~~~~~~~~v~~~~g~~~lirr~v~~~vGgfd~~F~~~ED~Dl~lR~~~~G~ki~~~p~a~ 413 (657)
T 4fix_A 334 HAEYDHDFAEYPLNDNNSRSKLLHRRIDVDYNGWWTCMIPRQVAEELGQPLPLFIKWDDADYGLRAAEHGYPTVTLPGAA 413 (657)
T ss_dssp TCCSCEETTTSCSSCSSHHHHGGGBCCCCSBCCTTEEEEEHHHHHHHCSCCSCSSSSHHHHHHHHHHHTTCCEEEEEEEE
T ss_pred cccccccccccccccccccccccccceeccccchhHhHhhHHHHHHhCCChhHhccCcHHHHHHHHHHcCCeEEEECCEE
Confidence 0 00000000111123345667888899999999999998877777899999999999999999999999
Q ss_pred eeccCCCcc
Q 026146 214 VDRVFGSSK 222 (242)
Q Consensus 214 ~~~~~~~s~ 222 (242)
++|..+.+.
T Consensus 414 V~H~~~~~~ 422 (657)
T 4fix_A 414 IWHMAWSDK 422 (657)
T ss_dssp EEECCSSSS
T ss_pred EEEcCcCcc
Confidence 888655443
No 8
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=99.98 E-value=6.2e-31 Score=209.80 Aligned_cols=209 Identities=22% Similarity=0.257 Sum_probs=149.7
Q ss_pred CCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEe-eCCCCcchHHHH
Q 026146 6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLR-PRPKKLGLGTAY 84 (242)
Q Consensus 6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~-~~~~~~g~~~a~ 84 (242)
..+|+||||||+||+++.|.++|+++.+|+....+|||||||||+|+|.++++++..... ..++++ ..+.|.|++.|+
T Consensus 45 ~~~~~vSViIp~yN~~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~-~~~~~~~~~~~n~G~~~a~ 123 (329)
T 3ckj_A 45 KAGRTISVVLPALDEEDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVV-SREQALPEVPIRPGKGEAL 123 (329)
T ss_dssp TTTCCEEEEEEESSCTTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEE-EHHHHCTTSCCCCSHHHHH
T ss_pred ccCCcEEEEEeeCCCHHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhc-cceeeeccCCCCCCHHHHH
Confidence 346899999999999999999999999997544589999999999999999988732210 012222 267899999999
Q ss_pred HHHHhhcCCCEEEEEeCCCC-CCCCChHHHHHHHHh-cCCcEEEEEEEeec--CCcc---CchhhHHHHHhHHHHHHHHH
Q 026146 85 IHGLKHASGSFVVIMDADLS-HHPKYLPSFIKKQLE-TGASIVTGTRYVRS--GGVH---GWNLMRKLTSRGANVLAQTL 157 (242)
Q Consensus 85 n~g~~~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~--~~~~---~~~~~~~~~~~~~~~~~~~~ 157 (242)
|.|++.|++|||+|+|+|+. ++|++|+.+++.+.+ +++++++|...... ++.. ...............+....
T Consensus 124 n~g~~~a~gd~i~~lD~D~~~~~p~~l~~l~~~l~~~~~~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (329)
T 3ckj_A 124 WRSLAASRGDIVVFVDSDLINPHPMFVPWLVGPLLTGDGVHLVKSFYRRPLNVGDAGGGAGATGGGRVTELVARPLLAAL 203 (329)
T ss_dssp HHHHHHCCCSEEEECCTTEESCCTTHHHHHHHHHHSCSSCCEEEEEEECC---------------CHHHHHTHHHHHHHH
T ss_pred HHHHHhCCCCEEEEECCCCCCcChHHHHHHHHHHHhCCCccEEEEEecccccCCcccccccccCCCceehhhHHHHHHHh
Confidence 99999999999999999999 899999999998654 57899998765432 1100 00001111111111111111
Q ss_pred hC--CCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHH-cCCc-eEEeeeeeeeccC
Q 026146 158 LW--PGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACR-KGYH-IEEVPITFVDRVF 218 (242)
Q Consensus 158 ~~--~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~-~g~~-i~~~p~~~~~~~~ 218 (242)
.. ..+....|+++++||+++++++ + ..+|++|+++++++.+ .|++ +.++|..+..|..
T Consensus 204 ~~~~~~~~~~~~g~~~~rr~~l~~i~-f--~~~~~~D~~l~~r~~~~~g~~~i~~v~~~~r~h~~ 265 (329)
T 3ckj_A 204 RPELGCILQPLGGEYAATRELLTSVP-F--APGYGVEIGLLVDTFDRLGLDAIAQVNLGVREHRN 265 (329)
T ss_dssp CGGGGGCSCTTCSCEEEEHHHHTTSC-B--CCGGGHHHHHHHHHHHHHCGGGEEEEEEEECEECC
T ss_pred hhhhccccCCCccceeeeHHHHHhCC-C--CCCCcccHHHHHHHHHhcCCccEeeecceEEecCC
Confidence 11 2344566778899999999996 4 3467799999999876 7775 8888887655543
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.97 E-value=2.6e-31 Score=229.06 Aligned_cols=202 Identities=17% Similarity=0.172 Sum_probs=156.8
Q ss_pred cCCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHH
Q 026146 5 NKNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAY 84 (242)
Q Consensus 5 ~~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~ 84 (242)
+..+|.||||||+||+++.|.++|+|+..|+. +++|||||||||+|+|.++++++.+.++ +++++. .+|.|.+.|+
T Consensus 371 ~~~~~~vsiii~~yn~~~~l~~~l~s~~~q~~-~~~eiivvdd~S~d~t~~~~~~~~~~~~--~i~~~~-~~n~G~~~a~ 446 (625)
T 2z86_A 371 LKRVPLVSIYIPAYNCSKYIVRCVESALNQTI-TDLEVCICDDGSTDDTLRILQEHYANHP--RVRFIS-QKNKGIGSAS 446 (625)
T ss_dssp CCSSCSEEEEEEESSCTTTHHHHHHHHHSSSC-CSEEEEEEEESCSSSHHHHHHHHHTTCT--TEEEEE-ECCCCHHHHH
T ss_pred hccCCeEEEEEeCCCCHHHHHHHHHHHHhCcC-CCeEEEEEECcCChhHHHHHHHHHhhCC--cEEEEe-CCCCCHHHHH
Confidence 34568999999999999999999999999975 5899999999999999999999877654 688886 6789999999
Q ss_pred HHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh-cCCcEEEEEEEeecCCccC--chhhHHHHHhHHHHHHHHHhCCC
Q 026146 85 IHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE-TGASIVTGTRYVRSGGVHG--WNLMRKLTSRGANVLAQTLLWPG 161 (242)
Q Consensus 85 n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~-~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 161 (242)
|.|++.|+||||+|+|+|+.++|++|+.+++.+++ ++.+++++.....+..... ..+... .... ....
T Consensus 447 n~g~~~a~g~~i~~ld~D~~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~--- 517 (625)
T 2z86_A 447 NTAVRLCRGFYIGQLDSDDFLEPDAVELCLDEFRKDLSLACVYTTNRNIDREGNLISNGYNWP--IYSR----EKLT--- 517 (625)
T ss_dssp HHHHHHCCSSEEEECCTTCEECTTHHHHHHHHHHHCTTCSEEEEEEEEECTTSCEEEECCCCS--SCCH----HHHT---
T ss_pred HHHHHhcCCCEEEEECCCcccChhHHHHHHHHHHhCCCeeEEEeeeEEECCCCCEeccCcccc--cCCH----HHHh---
Confidence 99999999999999999999999999999998865 4677777754433221000 000000 0000 0011
Q ss_pred ccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeee-ccCCC
Q 026146 162 VSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVD-RVFGS 220 (242)
Q Consensus 162 ~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~-~~~~~ 220 (242)
.....|++++++|++++++|+|++...+++|++|++|+.+.| ++.++|....+ |.++.
T Consensus 518 ~~~~~~~~~~~~r~~~~~~ggfd~~~~~~eD~dl~~r~~~~g-~~~~~~~~~~~~r~h~~ 576 (625)
T 2z86_A 518 SAMICHHFRMFTARAWNLTEGFNESISNAVDYDMYLKLSEVG-PFKHINKICYNRVLHGE 576 (625)
T ss_dssp TSCCCCSCEEEEHHHHTTTTCCCSSCSSCHHHHHHHHHTTTS-CEEEEEEEEEEEECC--
T ss_pred hcccCCceEEEEHHHHHHhCCCCCccCChHHHHHHHHHHHhC-CEEEeCCcEEEEEECCC
Confidence 123456777999999999999988877889999999999999 99999977655 33444
No 10
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=99.97 E-value=8.7e-31 Score=225.81 Aligned_cols=214 Identities=21% Similarity=0.225 Sum_probs=159.6
Q ss_pred CCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC-CcchHHHH
Q 026146 6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK-KLGLGTAY 84 (242)
Q Consensus 6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~-~~g~~~a~ 84 (242)
..+|+||||||+||+.+.|.++|+++..|.....+|||||||||+|+|.++++++.+. ..++++..+. +.|++.|+
T Consensus 90 ~~~p~vsviIp~~n~~~~l~~~l~sl~~q~~~~~~eiivvDd~s~d~t~~~~~~~~~~---~~i~~i~~~~~~~g~~~a~ 166 (625)
T 2z86_A 90 LIIDGLSIVIPTYNRAKILAITLACLCNQKTIYDYEVIVADDGSKENIEEIVREFESL---LNIKYVRQKDYGYQLCAVR 166 (625)
T ss_dssp CCCCCEEEEEEESSCHHHHHHHHHHHHTCCCSSCEEEEEEEESCSSCHHHHHHTTTTT---SCEEEEEECCCSCCHHHHH
T ss_pred ccCCcEEEEEecCCcHHHHHHHHHHHHhhccCCCeEEEEEeCCCchhHHHHHHHhhhc---CCeEEEEeCCCCcchhHHH
Confidence 3458999999999999999999999999965458999999999999999999887443 3577777654 34699999
Q ss_pred HHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCch-------hhHH---------HHH-
Q 026146 85 IHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWN-------LMRK---------LTS- 147 (242)
Q Consensus 85 n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~-------~~~~---------~~~- 147 (242)
|.|++.|++|||+|+|+|+.++|++|+.++..+++++..+++|.......+..... +... ...
T Consensus 167 N~g~~~a~g~~v~~lD~D~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (625)
T 2z86_A 167 NLGLRAAKYNYVAILDCDMAPNPLWVQSYMELLAVDDNVALIGPRKYIDTSKHTYLDFLSQKSLINEIPEIITNNQVAGK 246 (625)
T ss_dssp HHHHHHCCSSEEEEECTTEEECTTHHHHHHHHHHHCTTEEEECCEEEECCTTCCHHHHHHSTTGGGTSCC----------
T ss_pred HHHHHhCCcCEEEEECCCCCCCHHHHHHHHHHHhcCCceEEEEeeeeccCcccchhhcccchHHhhhcchhccCCchhhh
Confidence 99999999999999999999999999999999987777777776554433211000 0000 000
Q ss_pred --------hHHHHHHHH--H--hCCCccccccchhhcchHHHHHhhhcccCCCc--ccchHHHHHHHHcCCceEEeeeee
Q 026146 148 --------RGANVLAQT--L--LWPGVSDLTGSFRLYKKSVLEDVISSCVSKGY--VFQMEMIVRACRKGYHIEEVPITF 213 (242)
Q Consensus 148 --------~~~~~~~~~--~--~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~--~~d~~~~~~~~~~g~~i~~~p~~~ 213 (242)
......... . .........|+++++||++++++|+|++.... +||.+|++|+.+.|+++.++|.+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~ 326 (625)
T 2z86_A 247 VEQNKSVDWRIEHFKNTDNLRLCNTPFRFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAM 326 (625)
T ss_dssp -----CCCTHHHHHHHTTTTTTCSCGGGGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGGGC
T ss_pred hccCCccccchhhhcccccccccCCceeEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcccch
Confidence 000000000 0 11123357888999999999999999776644 699999999999999999999877
Q ss_pred eeccCCCcc
Q 026146 214 VDRVFGSSK 222 (242)
Q Consensus 214 ~~~~~~~s~ 222 (242)
++|..+.+.
T Consensus 327 v~H~~~~~~ 335 (625)
T 2z86_A 327 AYHQEPPGK 335 (625)
T ss_dssp EEEECCC--
T ss_pred hhccCCccc
Confidence 776665543
No 11
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.97 E-value=3.7e-30 Score=226.18 Aligned_cols=231 Identities=14% Similarity=0.187 Sum_probs=166.8
Q ss_pred CCCCcEEEEEeCccccccH-HHHHHHHHhhhcCC-CeEEEEEeCCCCCChH---------------HHHHHHHHHhCCCc
Q 026146 6 KNKNKYSIIIPTYNERLNI-ALIVYLIFKHLRDV-DFEIIVVDDGSPDGTQ---------------EVVKQLQQLYGEDR 68 (242)
Q Consensus 6 ~~~~~isiiip~~n~~~~l-~~~l~sl~~~~~~~-~~eiivvd~~s~d~t~---------------~~l~~~~~~~~~~~ 68 (242)
...|+|||+||+||+++.+ +++++|+.+|.++. .+|||||||||+|+|. +.++++.+..+
T Consensus 137 ~~~P~VSViIPtyNe~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~--- 213 (802)
T 4hg6_A 137 EELPTVDILVPSYNEPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELG--- 213 (802)
T ss_dssp TTCCCEEEEEECTTCCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHT---
T ss_pred cCCCcEEEEEEECCCCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcC---
Confidence 3468999999999998766 99999999997753 4899999999999883 34555555543
Q ss_pred EEEeeCCCC-cchHHHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHH-hcCCcEEEEEEEeecCCccCchh--hHH
Q 026146 69 ILLRPRPKK-LGLGTAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQL-ETGASIVTGTRYVRSGGVHGWNL--MRK 144 (242)
Q Consensus 69 ~~~~~~~~~-~g~~~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~-~~~~~~v~~~~~~~~~~~~~~~~--~~~ 144 (242)
+.++..++| .|+++|+|.|++.+++|||+++|+|+.++|+++++++..++ +++.+++.+.....+.+...... ...
T Consensus 214 v~~i~~~~~~~GKa~alN~gl~~a~gd~Il~lDaD~~~~pd~L~~lv~~~~~dp~v~~V~~~~~~~~~~~~~~~~~~~~~ 293 (802)
T 4hg6_A 214 VVYSTRERNEHAKAGNMSAALERLKGELVVVFDADHVPSRDFLARTVGYFVEDPDLFLVQTPHFFINPDPIQRNLALGDR 293 (802)
T ss_dssp CEEEECSSCCSHHHHHHHHHHHHCCCSEEEECCTTEEECTTHHHHHHHHHHHSSSCCEEECCCCBSSCCHHHHHHTCCTT
T ss_pred cEEEEecCCCCcchHHHHHHHHhcCCCEEEEECCCCCcChHHHHHHHHHHhcCCCeEEEeccEEEeCCchHhhhhhHHhh
Confidence 666665555 78999999999999999999999999999999999999996 45677777755544332000000 000
Q ss_pred ---HHHhHHHHHHHHHhCCCccccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHcCCceEEeeeeeeeccCCCc
Q 026146 145 ---LTSRGANVLAQTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRKGYHIEEVPITFVDRVFGSS 221 (242)
Q Consensus 145 ---~~~~~~~~~~~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~g~~i~~~p~~~~~~~~~~s 221 (242)
................+.....|+++++||++++++|++.+. .++||.+++.++.+.|+++.++|.+..++..+.+
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Rr~al~~vGgf~~~-~~~ED~~l~~rl~~~G~ri~~~~~~~~~~~~p~t 372 (802)
T 4hg6_A 294 CPPENEMFYGKIHRGLDRWGGAFFCGSAAVLRRRALDEAGGFAGE-TITEDAETALEIHSRGWKSLYIDRAMIAGLQPET 372 (802)
T ss_dssp SCCTTHHHHHTHHHHHHHTTCCCCCSSSEEEEHHHHHHHTTCCCS-SSSHHHHHHHHHHTTTCCEEECCCCCEEECCCCS
T ss_pred hhHHHHHHHHHHHhhHhhcCCceecccchhhhHHHHHHcCCcCCC-CcchHHHHHHHHHHcCCeEEEecCCEEEecCCCC
Confidence 000011111111111222335688889999999999988654 4679999999999999999999988887766555
Q ss_pred ccc-hHHHHHHHHHHHHHhh
Q 026146 222 KLG-GSEIVEYLKGLLYLLI 240 (242)
Q Consensus 222 ~~~-~~~~~~~~~~~~~~~~ 240 (242)
-.. .++..||.++..+.+.
T Consensus 373 ~~~~~~Qr~RW~~G~~q~l~ 392 (802)
T 4hg6_A 373 FASFIQQRGRWATGMMQMLL 392 (802)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccHHHHHH
Confidence 333 3667778777776654
No 12
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=99.97 E-value=7.3e-33 Score=242.07 Aligned_cols=202 Identities=13% Similarity=0.137 Sum_probs=0.0
Q ss_pred CCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHH
Q 026146 8 KNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHG 87 (242)
Q Consensus 8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g 87 (242)
||+||||||+||+++.|.+||+|+.+|+. +++|||||||||+|+|.++++++.+.++ .+++++..++|.|.++|+|.|
T Consensus 1 Mp~vSVIIp~yN~~~~L~~~L~Sll~Qt~-~~~EIIVVDDgStD~t~~il~~~~~~~~-~~i~~i~~~~n~G~~~arN~g 78 (729)
T 3l7i_A 1 MNKLTIIVTYYNAEEYITGCLESIKQQRT-QDFNLIIVNDGSTDQSKKLMDEAIKDYD-KNIRFIDLDENSGHAHARNIA 78 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEEEEEcCCCHHHHHHHHHHHHhCCC-CCeEEEEEECCCCCcHHHHHHHHHHhCC-CCEEEEECCCCCCHHHHHHHH
Confidence 47899999999999999999999999976 5899999999999999999999987754 479999999999999999999
Q ss_pred HhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCcccccc
Q 026146 88 LKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTG 167 (242)
Q Consensus 88 ~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 167 (242)
++.|+|+||+|+|+|+.+.|++|+.+++.++ +.+++++.......+.............. ..........+....+
T Consensus 79 i~~A~gdyI~flD~Dd~~~p~~l~~l~~~l~--~~d~v~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 154 (729)
T 3l7i_A 79 LEEVETPYFMFLDADDELASYAITFYLEKFN--NTDGLIAPIHSFTTQRPQFVDLDRVRVEY--FNAKENINSFLRKQSA 154 (729)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhccCCEEEEECCCCCCChhHHHHHHHHhc--CCCEEEEeeEEeecCCCccccccceeeee--ecchhhHHHHhhccch
Confidence 9999999999999999999999999999997 56666654433222111100000000000 0000001111223456
Q ss_pred chhhcchHHHHHhh-hcccCCCcccchHHHHHHHHcCCceEEe-eeeeee
Q 026146 168 SFRLYKKSVLEDVI-SSCVSKGYVFQMEMIVRACRKGYHIEEV-PITFVD 215 (242)
Q Consensus 168 ~~~~~rr~~~~~~~-~~~~~~~~~~d~~~~~~~~~~g~~i~~~-p~~~~~ 215 (242)
+++++||++++++| +|++...++||++|++++...|.++.++ |....+
T Consensus 155 ~~~~~rr~~l~~~gl~fde~~~~~ED~d~~~rl~~~g~~i~~~~~~~~~~ 204 (729)
T 3l7i_A 155 CNIIFRTAIVRAHHIRFNENLNTYVDWSFVLEYMKYVNKFVRIFNFPFYF 204 (729)
T ss_dssp --------------------------------------------------
T ss_pred hheeeeHHHHHHcCCCcCCCCCcccCHHHHHHHHHhcCCEEEecCcEEEE
Confidence 77899999999998 7888777899999999999999999999 665554
No 13
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=99.94 E-value=4.3e-25 Score=178.20 Aligned_cols=194 Identities=13% Similarity=0.092 Sum_probs=136.5
Q ss_pred EEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC---CCcEEEeeCC--C--CcchHHHHH
Q 026146 13 IIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG---EDRILLRPRP--K--KLGLGTAYI 85 (242)
Q Consensus 13 iiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~---~~~~~~~~~~--~--~~g~~~a~n 85 (242)
||||++| +.+..+++.+......+.+|||||||||+|+|.++++++....+ +.++..+... + |.|++.|++
T Consensus 4 VIiP~~e--E~I~~vl~~l~~~~~~~~~EIIVVDDGStD~T~eia~~la~~~~~~~g~~vi~~~~~r~~~~n~GkG~Al~ 81 (397)
T 2bo4_A 4 VVFPFKH--EHPEVLLHNVRVAAAHPRVHEVLCIGYERDQTYEAVERAAPEISRATGTPVSVRLQERLGTLRPGKGDGMN 81 (397)
T ss_dssp EEEECCS--SCHHHHHHHHHHHHHSTTCCEEEEEESSCCHHHHHHHHHHHHHHHHHSCCEEEEECCCCSSSSSSHHHHHH
T ss_pred EEEeCCc--cCHHHHHHHHHHhccCCCeEEEEEECcCCccHHHHHHHhhhhcccccCCeEEEEecccCCCCCCCHHHHHH
Confidence 5555544 46999999886432235789999999999999999997665443 3344443322 4 899999999
Q ss_pred HHH----hhcCCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCC
Q 026146 86 HGL----KHASGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWP 160 (242)
Q Consensus 86 ~g~----~~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (242)
.|+ +.++||+++++|+|.. .+|+++.++++.+++ ++|+|.|.......+ ......................
T Consensus 82 ~G~~~Al~~a~gd~vv~mDADlq~~~P~~i~~Ll~~l~~-g~D~V~g~~~r~~~~---~~~~~~~~~~ll~~~~~~~~~~ 157 (397)
T 2bo4_A 82 TALRYFLEETQWERIHFYDADITSFGPDWITKAEEAADF-GYGLVRHYFPRASTD---AMITWMITRTGFALLWPHTELS 157 (397)
T ss_dssp HHHHHHHHHCCCSEEEECCTTCSSCCHHHHHHHHHHHHT-TCSEEEEECCCCTTS---CHHHHHTHHHHHHHHCTTSSGG
T ss_pred HHHHHHHHhCCCCEEEEEcCCCCCCCHHHHHHHHHHHHc-CCCEEEEEeccccCC---cHHHHHHHHHHHHHHHHHhhcc
Confidence 999 8899999999999997 899999999998865 699999863322111 1111111111111111100111
Q ss_pred CccccccchhhcchHHHHHhhhc---ccCCCcccchHHHHHHHHcCCceEEeeee
Q 026146 161 GVSDLTGSFRLYKKSVLEDVISS---CVSKGYVFQMEMIVRACRKGYHIEEVPIT 212 (242)
Q Consensus 161 ~~~~~~g~~~~~rr~~~~~~~~~---~~~~~~~~d~~~~~~~~~~g~~i~~~p~~ 212 (242)
.+.+..++..+++|++++.+... ....+|+.|.++..++.+.|+++..+|..
T Consensus 158 ~i~dp~sG~~a~~R~vl~~l~~~~~~~~~~~fg~eiel~~~a~~~G~rI~EVpig 212 (397)
T 2bo4_A 158 WIEQPLGGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIP 212 (397)
T ss_dssp GCSCTTCCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECT
T ss_pred ccccCCcccEEEeHHHHHHHhhhcccCcCCCcchHHHHHHHHHHcCCEEEEEECc
Confidence 45556677889999999998432 24667888999999999999999999965
No 14
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=99.93 E-value=1.3e-25 Score=172.30 Aligned_cols=177 Identities=9% Similarity=-0.021 Sum_probs=119.9
Q ss_pred CCCcEEEEEeCccccccHHHHHHHHHhhhc-CCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146 7 NKNKYSIIIPTYNERLNIALIVYLIFKHLR-DVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI 85 (242)
Q Consensus 7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~-~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n 85 (242)
.++.+||| |+||+.+.|.+||+|+.+... +..+|||||||+|+|. .|.+.|+|
T Consensus 14 ~~~~iSII-~~yN~~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d~-------------------------~g~a~a~N 67 (249)
T 2nxv_A 14 STLMFSVC-SLVRDQAKYDRLLESFERFGFTPDKAEFLAADNREGNQ-------------------------FHGFSWHK 67 (249)
T ss_dssp CCCSEEEE-EEESCHHHHHHHHHHHHHTTCCTTTEEEEEEECTTSCS-------------------------CCTTTHHH
T ss_pred CcceEEEE-EeeCCHHHHHHHHHHHHHhccCCCcEEEEEEECCCCCc-------------------------ccHHHHHH
Confidence 45789975 679999999999998876433 2338999999999762 36789999
Q ss_pred HHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh-----cCCcEEEEEEEeecC--CccC-c-hhhHHHHHhHHHHHHHH
Q 026146 86 HGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE-----TGASIVTGTRYVRSG--GVHG-W-NLMRKLTSRGANVLAQT 156 (242)
Q Consensus 86 ~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~-----~~~~~v~~~~~~~~~--~~~~-~-~~~~~~~~~~~~~~~~~ 156 (242)
.|++.|+|||++|||+|+.++++|++.+++.+++ ++.+ ++|....... +... . .............. .
T Consensus 68 ~Gi~~A~g~yl~fln~D~~~~~~~l~~l~~~~~~~~~~~~~vg-~vg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~ 144 (249)
T 2nxv_A 68 QMLPRCKGRYVIFCHEDVELVDRGYDDLVAAIEALEEADPKWL-VAGVAGSPWRPLNHSVTAQALHISDVFGNDRRR--G 144 (249)
T ss_dssp HHGGGCCSSEEEEEETTEECSSCCHHHHHHHHHHHHHHCTTEE-EEESEEEESSCSCTTSCCCEEEEEETTEEEEEE--S
T ss_pred HHHHhcCCCEEEEECCCcccCccHHHHHHHHHHhcccCCCCee-EEeecccccCCCCceeeecccccCCcccccccc--C
Confidence 9999999999999999999999999999999876 3333 3332221111 1000 0 00000000000000 0
Q ss_pred HhCCCccccccchhhcchHHHHHhhhcccCC--CcccchHHHHHHHHcCCceEEeeeeeee
Q 026146 157 LLWPGVSDLTGSFRLYKKSVLEDVISSCVSK--GYVFQMEMIVRACRKGYHIEEVPITFVD 215 (242)
Q Consensus 157 ~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~--~~~~d~~~~~~~~~~g~~i~~~p~~~~~ 215 (242)
.....+..+.|+++++||++ +++|++.. .+.+|.|||+|+.++|+++.++|..+.|
T Consensus 145 ~~~~~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~~v~H 202 (249)
T 2nxv_A 145 NVPCRVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDFHLHH 202 (249)
T ss_dssp CSSEEEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCCCCEE
T ss_pred CCceEcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEeccEEEE
Confidence 01122445678889999999 66776532 2357999999999999999999965443
No 15
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=99.88 E-value=3.5e-23 Score=160.82 Aligned_cols=159 Identities=16% Similarity=0.136 Sum_probs=112.4
Q ss_pred CCCcEEEEEeCccccccHHHHHHHHH---hhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHH
Q 026146 7 NKNKYSIIIPTYNERLNIALIVYLIF---KHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTA 83 (242)
Q Consensus 7 ~~~~isiiip~~n~~~~l~~~l~sl~---~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a 83 (242)
..++||||||+||+++.|..+|++|. +|.. .++|||||||++ |. .++++.+
T Consensus 63 ~~~~VSIIIP~yN~~~~L~~~L~sl~~~l~q~~-~~~EIiVVdds~-d~------------------------~f~~a~a 116 (287)
T 2fy7_A 63 SPHKVAIIIPFRNRQEHLKYWLYYLHPVLQRQQ-LDYGIYVINQAG-DT------------------------IFNRAKL 116 (287)
T ss_dssp CSCEEEEEEEESSCHHHHHHHHHHHHHHHHHTT-CEEEEEEEEECS-SS------------------------CCCHHHH
T ss_pred cCCcEEEEEeeCCCHHHHHHHHHHHHHHHHHhc-CCceEEEEEeCC-CC------------------------ccchhhh
Confidence 46899999999999999999999998 4533 689999999943 21 2367889
Q ss_pred HHHHH----hhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhC
Q 026146 84 YIHGL----KHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLW 159 (242)
Q Consensus 84 ~n~g~----~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (242)
+|.|+ +.|++||++|+|+|+++.+++..-. . ...... . .. ..... ...
T Consensus 117 ~N~G~~~al~~A~gd~i~flD~D~i~~~d~~~~~---~-~~~p~~-~-----------~~-~~~~~-----------~~~ 168 (287)
T 2fy7_A 117 LNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYR---C-FSQPRH-I-----------SV-AMDKF-----------GFS 168 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEEECTTEEESBTTSCCS---C-CSSCEE-C-----------CC-EEGGG-----------TTS
T ss_pred hhhHHHHHHHhCCCCEEEEECCCcccCCCcceEe---c-CCCCce-E-----------EE-eeccc-----------ccC
Confidence 99999 8899999999999999998862100 0 000000 0 00 00000 011
Q ss_pred CCccccccchhhcchHHHHHhhhcccCC-Cc-ccchHHHHHHHHcCCceE-----EeeeeeeeccCC
Q 026146 160 PGVSDLTGSFRLYKKSVLEDVISSCVSK-GY-VFQMEMIVRACRKGYHIE-----EVPITFVDRVFG 219 (242)
Q Consensus 160 ~~~~~~~g~~~~~rr~~~~~~~~~~~~~-~~-~~d~~~~~~~~~~g~~i~-----~~p~~~~~~~~~ 219 (242)
.....+.|++++++|++|+++|||++.+ +| +||.||+.|+.++|+++. +.+..+++|.+.
T Consensus 169 ~~~~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~~ 235 (287)
T 2fy7_A 169 LPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSRD 235 (287)
T ss_dssp CSSTTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC----
T ss_pred CCcCceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCCC
Confidence 2234567889999999999999997754 45 499999999999999999 455666666554
No 16
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=99.82 E-value=1e-18 Score=138.99 Aligned_cols=218 Identities=20% Similarity=0.257 Sum_probs=138.6
Q ss_pred CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCCh------HHHHHHHHHHhCCCcEEEeeCCC------
Q 026146 9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGT------QEVVKQLQQLYGEDRILLRPRPK------ 76 (242)
Q Consensus 9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t------~~~l~~~~~~~~~~~~~~~~~~~------ 76 (242)
.++|||||+||++..+ +..++++.. ..+|||+|||||+|+| .++++++++..+ ....+++.+.
T Consensus 51 ~~iSVVIP~yNEE~~l---I~~vL~~i~-~~~eIIvVDDgSrD~tD~~~~~~~~l~~~~~~~~-~~~~Vl~~~~p~v~~~ 125 (394)
T 2zu9_A 51 GKMAVIVPMKNEKLHL---VDGVLKAIP-HKCPIIIVSNSKREGPNRYKLEVDLIRHFYNLTH-SKIIMIHQKDPGLAKA 125 (394)
T ss_dssp TTEEEEEEESSCCHHH---HHHHHHHSC-TTSCEEEEECCCCSSSCHHHHHHHHHHHHHHHHC-CCEEEEETTCHHHHHH
T ss_pred CCEEEEEecCcccHHH---HHHHHHcCC-CCcEEEEEECcCcccccchhhHHHHHHHHhhccc-cceEEEecCCcchhHH
Confidence 4799999999998543 555555543 3679999999998887 777888777654 3455555443
Q ss_pred ----------------CcchHHHHHHHHhhc---CCCEEEEEeCCCCCCCCChHHHHHHHHh------cCCcEE-EEEEE
Q 026146 77 ----------------KLGLGTAYIHGLKHA---SGSFVVIMDADLSHHPKYLPSFIKKQLE------TGASIV-TGTRY 130 (242)
Q Consensus 77 ----------------~~g~~~a~n~g~~~a---~~d~i~~lD~D~~~~~~~l~~l~~~~~~------~~~~~v-~~~~~ 130 (242)
+.|++.|+..|+..| ++|+|+|+|+|. ..|..+..+.+.+.. .++++| .+.+.
T Consensus 126 ~~~~g~~~il~~~~~~r~GKG~Am~aGl~~A~~~~gd~Vv~~DaDl-~iP~~v~~~~kgy~aG~~~a~~~~dmVR~~~r~ 204 (394)
T 2zu9_A 126 FKEVGYTDILDENGMIRSGKGEGMLVGLLLAKAIGAEYVGFVDADN-YIPGAVNEYVKDYAAGFLMSESEYTMVRLHWRH 204 (394)
T ss_dssp HHHHTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCB-SCHHHHHHHHHHHHHHHHHCCSSSEEEEEECC-
T ss_pred hhhccccccccccccccCChHHHHHHHHHHHhhCCCCEEEEEeCCC-CCHHHHHHHHHHhhhcccccccccceeeecccc
Confidence 249999999999999 899999999999 556666666665432 357777 43322
Q ss_pred eecCCc-----cCchhhHHHHHhHHHHHHHHHhCCCcc---ccccchhhcchHHHHHhhhcccCCCcccchHHHHHHHHc
Q 026146 131 VRSGGV-----HGWNLMRKLTSRGANVLAQTLLWPGVS---DLTGSFRLYKKSVLEDVISSCVSKGYVFQMEMIVRACRK 202 (242)
Q Consensus 131 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 202 (242)
...... ..+.....+.++..+.+.+.+.+.... ...+|..+++|++++.+. + ..+|+.+.++...+.+.
T Consensus 205 ~~~~~~~rl~~~~~GRv~rl~~r~Ln~L~~~l~g~~~d~~~tplsGe~A~rr~ll~~L~-~--~~gyGvE~~lLv~~~r~ 281 (394)
T 2zu9_A 205 KPKVTKGTLYFKKWGRVSEITNHYLNLLVSEHTAFETTIMVTGNAGEHAMTMKLAEILP-F--STGYSIEPYEIVYILER 281 (394)
T ss_dssp ----------------HHHHHHHHHHHHHHHHHSSCCCCCCCTTCSSEEEEHHHHTTCC-E--ESGGGHHHHHHHHHHHH
T ss_pred ccccccccccccCCCceehhHHHHHHHHHHHhcCccccCcCCCCchhhHhhHHHHhcCC-C--CCCCCCCHHHHHHHHHh
Confidence 211000 122333345555555555555553321 234467899999999872 2 35888888899888887
Q ss_pred ----------------CCceEEeeeeeeeccCCCcccchHHHHHHHHHHHHH
Q 026146 203 ----------------GYHIEEVPITFVDRVFGSSKLGGSEIVEYLKGLLYL 238 (242)
Q Consensus 203 ----------------g~~i~~~p~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 238 (242)
|.+|..+... ..|.|... ....+.+.....+..
T Consensus 282 ~~~~~~~~~~~~~~~~g~~I~qve~~-~pH~H~~~--g~~~l~~M~~~~~~~ 330 (394)
T 2zu9_A 282 FGKWENVEEFKDVFDQGIEIFQIETL-NPHFHEDK--GKEHVKEMLLLSLAT 330 (394)
T ss_dssp HSSCCSCGGGHHHHHHCEEEEEEECS-SCCCBCCC--CHHHHHHHHHHHHHH
T ss_pred hCccccccccccccccCceEEEEecc-CCcccccc--chhHHHHHHHHHHHH
Confidence 6677766653 33444322 344444444444443
No 17
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=99.74 E-value=1.1e-17 Score=129.66 Aligned_cols=147 Identities=20% Similarity=0.198 Sum_probs=105.8
Q ss_pred CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCCh---HHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146 9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGT---QEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI 85 (242)
Q Consensus 9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t---~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n 85 (242)
+++|||||+||++. .+++++++|.. .+++||+|||||+|.+ .++++++++... .++.+++ .+|.|.+.|+|
T Consensus 53 ~klSIVVPvYNEe~---~lLesVl~qi~-~d~eIIlVdDGS~D~s~~e~dil~~~~~~~~-~ri~viH-Qkn~gls~Ar~ 126 (391)
T 2wvl_A 53 EQTAIVVPTRNERL---KLLEGVLSGIP-HEALILVASNSSPDRFQMERDLLEEFAHLTE-RPALIFH-QKDPALAEALR 126 (391)
T ss_dssp TTEEEEEEESSCCH---HHHHHHHHTSC-TTSEEEEEECCCHHHHHHHHHHHHHHHHHTT-CCEEEEE-TTCHHHHHHHH
T ss_pred hceEEEEeccCcHH---HHHHHHHhcCC-CCceEEEEECCCCCChHhHHHHHHHHHhhcc-cceEEEe-ccChHHHHHHH
Confidence 67999999999886 47999999965 5899999999999999 568888887432 4788887 44677777775
Q ss_pred -----------------------HHHhhc---CCCEEEEEeCCCCCCCCChHHHHHHHH-----hcCCcEE-EEEEEeec
Q 026146 86 -----------------------HGLKHA---SGSFVVIMDADLSHHPKYLPSFIKKQL-----ETGASIV-TGTRYVRS 133 (242)
Q Consensus 86 -----------------------~g~~~a---~~d~i~~lD~D~~~~~~~l~~l~~~~~-----~~~~~~v-~~~~~~~~ 133 (242)
.|+..| .++||.|+|+|+.++.+..+-+..... ..+.++| ++.+..+.
T Consensus 127 ~~G~~~il~~~~~vR~GKGegmi~Gi~~Ak~~~geYVgFvDADdyi~~~v~Eyvk~yaag~~~a~s~~~MVRI~wR~kPK 206 (391)
T 2wvl_A 127 AGGYPHPIGEDGLVRSGKAEGMILALVFAALSGRRYVGFIDADNYFPGAVWEYVRAYAAGFLMAKTPFAMVRILWRYKPK 206 (391)
T ss_dssp HTTCCTTBCTTSSBCCSHHHHHHHHHHHHHHTTCSEEEECCSCBSCHHHHHHHHHHHHHHHHHCCSSEEEEEEECCCCC-
T ss_pred hcCcchhhcccccccccchHHHHHHHHHHHhcCCCEEEEEcCcCCCccCHHHHHHHHHHHhcccCCCcceEEEecccCcc
Confidence 367776 699999999998886555444332221 2567777 77666443
Q ss_pred C------CccCchhhHHHHHhHHHHHHHHHhCCC
Q 026146 134 G------GVHGWNLMRKLTSRGANVLAQTLLWPG 161 (242)
Q Consensus 134 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (242)
- ....++..+...++..+.+.....+..
T Consensus 207 ~~~~~~l~f~k~Grvs~itNr~lN~Lis~~~g~e 240 (391)
T 2wvl_A 207 LTEDEGVVFRRYGRVSERNNRALNQLIGGVSGFE 240 (391)
T ss_dssp -----CCHHHHTHHHHHHHHHHHHHHHHHHHSSC
T ss_pred cccCCceeEeecCccchhhHHHHHHHHHHhhCcc
Confidence 1 234456666777777787777665543
No 18
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=99.40 E-value=7.7e-13 Score=104.60 Aligned_cols=111 Identities=14% Similarity=0.166 Sum_probs=84.4
Q ss_pred CcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEee---------CCCCc
Q 026146 9 NKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRP---------RPKKL 78 (242)
Q Consensus 9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~---------~~~~~ 78 (242)
+.++|+|++||+.+ +.++|++|.+|... ..++|||.|||+.+++.++++++.. ++..+. .+.|.
T Consensus 2 ~~~pViI~~yNRp~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~~vi~~~~~-----~I~~~~~~d~~~~~~~~~N~ 75 (343)
T 1fo8_A 2 AVIPILVIACDRST-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETAQVIASYGS-----AVTHIRQPDLSNIAVQPDHR 75 (343)
T ss_dssp CCCCEEEEESSCTT-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHHHHHHTTGG-----GSEEEECSCCCCCCCCTTCG
T ss_pred CcccEEEEECCcHH-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHHHHHHHcCC-----ceEEEEcCCccccccchhhc
Confidence 45889999999998 99999999999633 4579999999999888888887632 233321 34566
Q ss_pred chH----------HHHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHH--hcCCcEE
Q 026146 79 GLG----------TAYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQL--ETGASIV 125 (242)
Q Consensus 79 g~~----------~a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~--~~~~~~v 125 (242)
|.. .|+|.+++.+++++++|+|+|+++.|++++-+.+.+. +.+..+.
T Consensus 76 g~~~y~~ia~h~~~al~~vf~~~~~~~vIiLEDDl~~spdF~~y~~~~l~~y~~D~~I~ 134 (343)
T 1fo8_A 76 KFQGYYKIARHYRWALGQIFHNFNYPAAVVVEDDLEVAPDFFEYFQATYPLLKADPSLW 134 (343)
T ss_dssp GGHHHHHHHHHHHHHHHHHHTTSCCSEEEEEETTEEECTTHHHHHHHHHHHHHHCTTEE
T ss_pred CcccchhHhHHHHHHHHHHHHhccCCEEEEEcCCCeECHHHHHHHHHHHHHhhcCCcEE
Confidence 643 5677777777899999999999999999977666554 3344443
No 19
>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}
Probab=98.71 E-value=1.3e-07 Score=71.43 Aligned_cols=151 Identities=15% Similarity=0.191 Sum_probs=102.1
Q ss_pred CCCcEEEEEeCccccccHHHHHHHHHhhhc--CCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHH
Q 026146 7 NKNKYSIIIPTYNERLNIALIVYLIFKHLR--DVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAY 84 (242)
Q Consensus 7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~--~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~ 84 (242)
...+++||||-+|+++.|...|.-+...+. +-.+.|+||+... ...+..+..+
T Consensus 49 ~~~kvAIIIPyRdR~~hL~~fl~~lhp~L~rQ~l~y~I~VieQ~~-------------------------~~~FNRa~Ll 103 (287)
T 3lw6_A 49 SVHKMALLVPFRDRFEELLQFVPHMTAFLKRQGVAHHIFVLNQVD-------------------------RFRFNRASLI 103 (287)
T ss_dssp CCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTTCEEEEEEEEECS-------------------------SSCCCHHHHH
T ss_pred CcceEEEEEEeCCHHHHHHHHHHHHHHHHHHcCCceEEEEEecCC-------------------------CCccchhhee
Confidence 346899999999999999887765543222 2578999998742 1246788999
Q ss_pred HHHHhhcC--CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCc
Q 026146 85 IHGLKHAS--GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGV 162 (242)
Q Consensus 85 n~g~~~a~--~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (242)
|.|+..|. .|+++|=|.|.++..+... ..-++.. +++-. ... ........
T Consensus 104 NvGf~ea~~~~d~~ifHDVDLlP~dd~n~-----Y~c~~~~---~P~Hl-s~~-------------------~~~~~~~Y 155 (287)
T 3lw6_A 104 NVGFQFASDVYDYIAMHDVDLLPLNDNLL-----YEYPSSL---GPLHI-AGP-------------------KLHPKYHY 155 (287)
T ss_dssp HHHHHHSCTTCCEEEEECTTEEECCTTSC-----CCCCCTT---CCEES-SCT-------------------TTCSSCCC
T ss_pred cccHHHHhccCCEEEEecccccccCCCcc-----ccCCCCC---CceEE-eec-------------------cccCCCCc
Confidence 99999986 6999999999775433211 0000000 00100 000 00011234
Q ss_pred cccccchhhcchHHHHHhhhccc-CCCc-ccchHHHHHHHHcCCceEEee
Q 026146 163 SDLTGSFRLYKKSVLEDVISSCV-SKGY-VFQMEMIVRACRKGYHIEEVP 210 (242)
Q Consensus 163 ~~~~g~~~~~rr~~~~~~~~~~~-~~~~-~~d~~~~~~~~~~g~~i~~~p 210 (242)
....||.++++++.+.+++||.+ ..+| +||.||..|+..+|+++...+
T Consensus 156 ~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~ 205 (287)
T 3lw6_A 156 DNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQ 205 (287)
T ss_dssp TTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCS
T ss_pred CCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCC
Confidence 45678999999999999999865 4455 689999999999999998775
No 20
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=98.58 E-value=5.8e-09 Score=74.16 Aligned_cols=114 Identities=12% Similarity=0.163 Sum_probs=77.0
Q ss_pred hHHHHHHHHhh----cCCCEEEEEeCC---CCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHH
Q 026146 80 LGTAYIHGLKH----ASGSFVVIMDAD---LSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANV 152 (242)
Q Consensus 80 ~~~a~n~g~~~----a~~d~i~~lD~D---~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (242)
...|||..+.. ...|+++|+|+| ...+|+.+.+++ +.+.|+|.|.+...... ..+.. .+.
T Consensus 37 I~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~FdPe~V~rLl----~~g~DVV~GsYp~K~~~--~~s~~-------a~~ 103 (203)
T 2c0n_A 37 VAVQREIALDMFLEMKDYDTLAFLDEDVVPIEIDFQKVEAKF----NEGYDVVCGYYYLKTLR--GYSVY-------RKD 103 (203)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEECTTEEEEECCHHHHHHHH----HHTCSEEEEECBCTTSS--SBSEE-------SSS
T ss_pred hHHHHHHHHHHHHhcCCCCEEEEEeCCCCccccCHHHHHHHH----hCCCCEEEEEeeccCCC--ccchH-------HHH
Confidence 45566655554 457999999999 889999998888 35899999988775422 10000 000
Q ss_pred HHHHHhCCCccccccchhhcchHHHHHhh-hcc-------cCCCcccchHHHHHHHHcCCce
Q 026146 153 LAQTLLWPGVSDLTGSFRLYKKSVLEDVI-SSC-------VSKGYVFQMEMIVRACRKGYHI 206 (242)
Q Consensus 153 ~~~~~~~~~~~~~~g~~~~~rr~~~~~~~-~~~-------~~~~~~~d~~~~~~~~~~g~~i 206 (242)
......+..+.+..+|+++++|++++++- .+. .....+||..||..+...|+-+
T Consensus 104 y~~~i~~~~V~d~~tGF~lIkR~V~e~L~~p~fl~~~~~e~~~~~gEdv~F~~~~k~~~~~~ 165 (203)
T 2c0n_A 104 WEKEIFDGEVNGCGLGFTFIKREFLEKIKRPAFLAFKPIESPHWIGEDVYFFSTHKPRTYAL 165 (203)
T ss_dssp BCSSCCCEECSEECSSEEEEEHHHHTTSCSSCCCC---------CCHHHHHHHHHCCCEEEE
T ss_pred HHHhccCceeeeccccEEEEhHHHHHHHhhhhhhcCChhhhccccCCceEEEeccccccccc
Confidence 01112233677888999999999999981 111 2345688999999999888776
No 21
>3cu0_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 3; glcat-I, glycosyltransferase, heparan sulfate biosynthesis, glycoprotein; HET: GAL UDP; 1.90A {Homo sapiens} SCOP: c.68.1.7 PDB: 1kws_A* 1fgg_A*
Probab=97.83 E-value=9e-05 Score=55.85 Aligned_cols=101 Identities=11% Similarity=0.021 Sum_probs=64.6
Q ss_pred CCCCcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCC--CCChHHHHHHHHHHhCCCcEEEeeCCCCc----
Q 026146 6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGS--PDGTQEVVKQLQQLYGEDRILLRPRPKKL---- 78 (242)
Q Consensus 6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s--~d~t~~~l~~~~~~~~~~~~~~~~~~~~~---- 78 (242)
...|.|-||.|||.+.....+ |..|.+.+.. +++.+|||+|+. ++.+.++|++. +...+++..+.+.
T Consensus 18 ~~~p~IivVTPTy~R~~Q~a~-LtRLa~TL~~Vp~L~WIVVEd~~~~t~~va~lL~rs-----Gl~y~HL~~~~p~~~~~ 91 (281)
T 3cu0_A 18 GSHMTIYVVTPTYARLVQKAE-LVRLSQTLSLVPRLHWLLVEDAEGPTPLVSGLLAAS-----GLLFTHLVVLTPKAQRL 91 (281)
T ss_dssp ---CEEEEEEEECCSTTHHHH-HHHHHHHHTTSSSEEEEEEESSSSCCHHHHHHHHHH-----CSEEEEEECCCC-----
T ss_pred CCCCeEEEEeCCCCCcchhHH-HHHHHHHHhcCCceEEEEEcCCCCCCHHHHHHHHHc-----CCceEEeccCCCccccc
Confidence 356889999999998755443 3333333233 689999999964 34556666654 3445555433221
Q ss_pred ----------chHHHHHHHHhhcC-----------------CCEEEEEeCCCCCCCCChHH
Q 026146 79 ----------GLGTAYIHGLKHAS-----------------GSFVVIMDADLSHHPKYLPS 112 (242)
Q Consensus 79 ----------g~~~a~n~g~~~a~-----------------~d~i~~lD~D~~~~~~~l~~ 112 (242)
.....||.|++..+ .-+|.|.|+|...+...+++
T Consensus 92 ~~~dp~w~~~rg~~QRN~AL~~Ir~~~~~~~~~~~~~~~~~~GVVyFADDDNtYsl~LFde 152 (281)
T 3cu0_A 92 REGEPGWVHPRGVEQRNKALDWLRGRGGAVGGEKDPPPPGTQGVVYFADDDNTYSRELFEE 152 (281)
T ss_dssp ------CCCCCSHHHHHHHHHHHTTCCCEEEECCSCCCTTCCEEEEECCTTSEECHHHHHH
T ss_pred cccccccccchhHHHHHHHHHHHHhhccccchhccccccCCceeEEEecCCCcccHHHHHH
Confidence 12467999997655 24688999999888777776
No 22
>1v84_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 1; glycoprotein, glycocyltransferase, HNK-1 epitop; HET: GAL NDG NAG TLA UDP; 1.82A {Homo sapiens} SCOP: c.68.1.7 PDB: 1v83_A* 1v82_A*
Probab=97.76 E-value=0.00013 Score=54.45 Aligned_cols=101 Identities=13% Similarity=0.084 Sum_probs=66.0
Q ss_pred CCcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCC--CCChHHHHHHHHHHhCCCcEEEeeCCCC-------
Q 026146 8 KNKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGS--PDGTQEVVKQLQQLYGEDRILLRPRPKK------- 77 (242)
Q Consensus 8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s--~d~t~~~l~~~~~~~~~~~~~~~~~~~~------- 77 (242)
.|.|=+|.|||.+.....++ ..|.+.+.. +++.+|||+|+. ++.+.++|++. +...+++..+..
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~L-tRLa~TL~~Vp~L~WIVVEd~~~~t~~va~lL~~s-----gl~y~HL~~~~p~~~~~~~ 75 (253)
T 1v84_A 2 LPTIHVVTPTYSRPVQKAEL-TRMANTLLHVPNLHWLVVEDAPRRTPLTARLLRDT-----GLNYTHLHVETPRNYKLRG 75 (253)
T ss_dssp CCEEEEEEEECCSTTHHHHH-HHHHHHHTTSSSEEEEEEESSSSCCHHHHHHHHHH-----CCEEEEEECCCCHHHHCC-
T ss_pred CCEEEEEeCCCCccchhHHH-HHHhhhhccCCceEEEEEeCCCCCCHHHHHHHHHc-----CCceEEeecCCCccccccc
Confidence 57899999999986555432 233222222 789999999965 45566666654 344555544321
Q ss_pred -------cchHHHHHHHHhhcC---------CCEEEEEeCCCCCCCCChHHHH
Q 026146 78 -------LGLGTAYIHGLKHAS---------GSFVVIMDADLSHHPKYLPSFI 114 (242)
Q Consensus 78 -------~g~~~a~n~g~~~a~---------~d~i~~lD~D~~~~~~~l~~l~ 114 (242)
......||.|++..+ .-+|.|.|+|...+...++++-
T Consensus 76 ~~~~~~~~rg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtYdl~LF~emR 128 (253)
T 1v84_A 76 DARDPRIPRGTMQRNLALRWLRETFPRNSSQPGVVYFADDDNTYSLELFEEMR 128 (253)
T ss_dssp ------CCTTHHHHHHHHHHHHHHSCSSSCCCEEEEECCTTSEECHHHHHHHH
T ss_pred cccCccccchHHHHHHHHHHHHHhcccccccceeEEEecCCCcccHHHHHHHh
Confidence 113468999997653 3578999999988877777743
No 23
>2d0j_A Galactosylgalactosylxylosylprotein 3-beta- glucuronosyltransferase 2; rossmann-like fold, glucuronyltransferase; 2.00A {Homo sapiens}
Probab=97.73 E-value=0.00022 Score=52.98 Aligned_cols=101 Identities=14% Similarity=0.148 Sum_probs=65.1
Q ss_pred CCcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCC--hHHHHHHHHHHhCCCcEEEeeCCC--Cc----
Q 026146 8 KNKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDG--TQEVVKQLQQLYGEDRILLRPRPK--KL---- 78 (242)
Q Consensus 8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~--t~~~l~~~~~~~~~~~~~~~~~~~--~~---- 78 (242)
.|.|-+|.|||.+.....+ |..|.+.+.. +.+.+|||+|+..-. +.++|++. +...+++..+. ++
T Consensus 2 ~p~I~vVTPTy~R~~Q~a~-LtRLa~TL~~Vp~l~WIVVEd~~~~~~~v~~lL~~s-----gl~y~HL~~~~~~~~~~~~ 75 (246)
T 2d0j_A 2 LPTIYAITPTYSRPVQKAE-LTRLANTFRQVAQLHWILVEDAAARSELVSRFLARA-----GLPSTHLHVPTPRRYKRPG 75 (246)
T ss_dssp CCCEEEEEEECCSTTHHHH-HHHHHHHHTTSTTEEEEEEESSSSCCHHHHHHHHHS-----CSCEEEEECCCCCC----C
T ss_pred CCEEEEEeCCCCccchhHH-HHHHHHHHhcCCceEEEEEcCCCCCCHHHHHHHHHc-----CCceEEEecCCccccCCCC
Confidence 5789999999998655543 3333333333 678999999976432 34445443 34455554331 11
Q ss_pred --chHHHHHHHHhhcC---------CCEEEEEeCCCCCCCCChHHHH
Q 026146 79 --GLGTAYIHGLKHAS---------GSFVVIMDADLSHHPKYLPSFI 114 (242)
Q Consensus 79 --g~~~a~n~g~~~a~---------~d~i~~lD~D~~~~~~~l~~l~ 114 (242)
.....||.|++..+ .-+|.|.|+|...+-..++++-
T Consensus 76 ~prg~~qRn~AL~~Ir~~~~~~~~~~GVVyFADDdNtY~l~LF~emR 122 (246)
T 2d0j_A 76 LPRATEQRNAGLAWLRQRHQHQRAQPGVLFFADDDNTYSLELFQEMR 122 (246)
T ss_dssp CCCCHHHHHHHHHHHHHHSCSSSCCCCEEEECCTTCEECTHHHHHHT
T ss_pred CcchHHHHHHHHHHHHHhcccccCccceEEEccCCCcccHHHHHHHh
Confidence 12478999997642 3688999999998888777743
No 24
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A*
Probab=97.63 E-value=0.00035 Score=53.37 Aligned_cols=190 Identities=12% Similarity=0.055 Sum_probs=99.8
Q ss_pred CCcEEEEEeCccccc--------------cHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEee
Q 026146 8 KNKYSIIIPTYNERL--------------NIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRP 73 (242)
Q Consensus 8 ~~~isiiip~~n~~~--------------~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~ 73 (242)
.|++.+|||+..... .+..+++.+.+. .--+|+|+.+ . +.++++...++ ..+.+..
T Consensus 16 ~M~~~aIIlA~G~stRlp~K~L~~i~GkPmi~~~l~~l~~~---~i~~IvV~t~--~----~~i~~~~~~~g-~~v~~~~ 85 (264)
T 3k8d_A 16 HMSFVVIIPARYASTRLPGKPLVDINGKPMIVHVLERARES---GAERIIVATD--H----EDVARAVEAAG-GEVCMTR 85 (264)
T ss_dssp --CCEEEEECCSCCSSSTTGGGCEETTEEHHHHHHHHHHHT---TCSEEEEEES--C----HHHHHHHHHTT-CEEEECC
T ss_pred CCceEEEEEcCCCCCCCCCcceeeECCeEHHHHHHHHHHhC---CCCEEEEECC--H----HHHHHHHHHcC-CEEEEec
Confidence 456888888876444 344666666543 2236777764 1 22344444433 3343333
Q ss_pred CCCCcchHHHHHHHHhhc---CCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEee---------------cC
Q 026146 74 RPKKLGLGTAYIHGLKHA---SGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVR---------------SG 134 (242)
Q Consensus 74 ~~~~~g~~~a~n~g~~~a---~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~---------------~~ 134 (242)
.....|.+. ...+++.. ..|+++++++|.. +++..+..+++.+.+.+.++++...... +.
T Consensus 86 ~~~~~Gt~~-i~~~~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~~~~~~v~d~~~~~~p~~vkVv~d~ 164 (264)
T 3k8d_A 86 ADHQSGTER-LAEVVEKCAFSDDTVIVNVQGDEPMIPATIIRQVADNLAQRQVGMATLAVPIHNAEEAFNPNAVKVVLDA 164 (264)
T ss_dssp TTCCSHHHH-HHHHHHHHTCCTTCEEEEECTTCTTCCHHHHHHHHHHHHTSSCSEEEEEEECCSHHHHTCTTSCEEEECT
T ss_pred CCCCCCHHH-HHHHHHHhccCCCCEEEEEcCCcccCCHHHHHHHHHHHhhcCCCEEEEEEEcCCHHHccCCCceEEEECC
Confidence 444445443 45555544 5799999999985 7899999999998876776655433211 11
Q ss_pred CccCchhhHHHHHhHHHHHHH-HHhCCCccccccchhhcchHHHHHhhhcccCCCcccchH--HHHHHHHcCCceEEee
Q 026146 135 GVHGWNLMRKLTSRGANVLAQ-TLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQME--MIVRACRKGYHIEEVP 210 (242)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~--~~~~~~~~g~~i~~~p 210 (242)
......+.+............ ............|..+|++++++..-.... ...|..| -.+|+...|+++..+.
T Consensus 165 ~g~~l~fsr~~ip~~r~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~~~~--~~lE~~e~leqlr~le~G~~I~~~~ 241 (264)
T 3k8d_A 165 EGYALYFSRATIPWDRDRFAEGLETVGDNFLRHLGIYGYRAGFIRRYVNWQP--SPLEHIEMLEQLRVLWYGEKIHVAV 241 (264)
T ss_dssp TSBEEEEESSCCSCCHHHHHHCSSCCCSCCEEECSEEEEEHHHHHHHHHSCC--CHHHHHHTCTTHHHHHTTCCEEEEE
T ss_pred CCeEEEEecCCCCCCCccccccccccCCcceEEEEEEEECHHHHHHHHhCCC--ChhhhHHHHHHHHHHHCCCceEEEE
Confidence 101111111100000000000 000111223456778999999998843221 1122221 1257789999988764
No 25
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13
Probab=97.10 E-value=0.0067 Score=45.86 Aligned_cols=177 Identities=12% Similarity=0.064 Sum_probs=92.6
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc---CCCEEEE
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA---SGSFVVI 98 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a---~~d~i~~ 98 (242)
..+..+++.+.+.- --+|+|+-+. +.++++...++ ..+.+...+...|.+. ...+++.. ..+++++
T Consensus 28 Pli~~~l~~l~~~~---~~~ivVv~~~------~~i~~~~~~~g-~~v~~~~~~~~~Gt~~-~~~~~~~l~~~~~d~vlv 96 (252)
T 3oam_A 28 PMIQWVYEQAMQAG---ADRVIIATDD------ERVEQAVQAFG-GVVCMTSPNHQSGTER-LAEVVAKMAIPADHIVVN 96 (252)
T ss_dssp EHHHHHHHHHHHTT---CSEEEEEESC------HHHHHHHHHTT-CEEEECCTTCCSHHHH-HHHHHHHTTCCTTSEEEE
T ss_pred EHHHHHHHHHHhCC---CCeEEEECCH------HHHHHHHHHcC-CEEEEcCCCCCCcHHH-HHHHHHhcCcCCCCEEEE
Confidence 34557777776542 2367777641 23444444432 3454444444556555 34455554 4799999
Q ss_pred EeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeec---------------CCccCchhhHHHHHhHHHHHHHHHh-CCC
Q 026146 99 MDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRS---------------GGVHGWNLMRKLTSRGANVLAQTLL-WPG 161 (242)
Q Consensus 99 lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 161 (242)
+++|.. +++..+..+++.+.+.+.++++......+ .+..-..+.+............... ...
T Consensus 97 ~~gD~Pli~~~~i~~l~~~~~~~~~~~~~~~~~v~~~~~~~~p~~g~vv~d~~g~v~~fsr~~i~~~~~~~~~~~~~~~~ 176 (252)
T 3oam_A 97 VQGDEPLIPPAIIRQVADNLAACSAPMATLAVEIEDEAEVFNPNAVKVITDKSGYALYFSRATIPWDRDNFAKADKAIVQ 176 (252)
T ss_dssp CCTTCTTCCHHHHHHHHHHHHHSSCSEEEEEEEECCHHHHTCTTSCEEEECTTSBEEEEESSCSSCCHHHHHSSSCCCCS
T ss_pred EeCCeeecCHHHHHHHHHHHHhcCCCEEEEeeecCCHHHhhCCCceEEEECCCCeEEEEeCCCCCCCCCccccccccccc
Confidence 999985 78999999999987766666554322211 1000001100000000000000000 012
Q ss_pred ccccccchhhcchHHHHHhhhccc-CCCcccchHHHHHHHHcCCceEEee
Q 026146 162 VSDLTGSFRLYKKSVLEDVISSCV-SKGYVFQMEMIVRACRKGYHIEEVP 210 (242)
Q Consensus 162 ~~~~~g~~~~~rr~~~~~~~~~~~-~~~~~~d~~~~~~~~~~g~~i~~~p 210 (242)
......|.++|++++++.+..... .....|..+. +++...|+++...+
T Consensus 177 ~~~~n~GiY~~~~~~l~~~~~~~~~~~e~~E~le~-lr~l~~G~~i~~~~ 225 (252)
T 3oam_A 177 PLLRHIGIYAYRAGFINTYLDWQPSQLEKIECLEQ-LRVLWHGEKIHVAV 225 (252)
T ss_dssp CEEEEEEEEEEETTHHHHHHHSCCCHHHHHHTCTT-HHHHHTTCCEEEEE
T ss_pred cceEEEEEEEcCHHHHHHHHcCCCCcccccchhHH-HHHHHCCCeEEEEE
Confidence 334667888999999998743221 1111222232 35678899988764
No 26
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0
Probab=96.86 E-value=0.011 Score=44.83 Aligned_cols=191 Identities=15% Similarity=0.162 Sum_probs=98.9
Q ss_pred CCcEEEEEeCcccc--------------ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEee
Q 026146 8 KNKYSIIIPTYNER--------------LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRP 73 (242)
Q Consensus 8 ~~~isiiip~~n~~--------------~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~ 73 (242)
.+++.+|||+.... ..+..+++.+.+. .--+|+|+-+. +.++++.+.++ ..+.+..
T Consensus 7 ~M~~~aIIlA~G~stRl~~K~L~~i~GkPli~~~l~~l~~~---~i~~VvVvt~~------~~i~~~~~~~g-~~v~~~~ 76 (256)
T 3tqd_A 7 KMEFRVIIPARFDSTRLPGKALVDIAGKPMIQHVYESAIKS---GAEEVVIATDD------KRIRQVAEDFG-AVVCMTS 76 (256)
T ss_dssp --CCEEEEECCCC---CTTGGGCEETTEEHHHHHHHHHHHT---TCSEEEEEESC------HHHHHHHHHTT-CEEEECC
T ss_pred CCCceEEEEcCCCCCCCCCCCeeeECCchHHHHHHHHHHhC---CCCEEEEECCH------HHHHHHHHHcC-CeEEEeC
Confidence 35788888886533 3456677777654 12367777541 23444444433 3444433
Q ss_pred CCCCcchHHHHHHHHhhc---CCCEEEEEeCCCC-CCCCChHHHHHHHHhc-CCcEEEEEEEe---------------ec
Q 026146 74 RPKKLGLGTAYIHGLKHA---SGSFVVIMDADLS-HHPKYLPSFIKKQLET-GASIVTGTRYV---------------RS 133 (242)
Q Consensus 74 ~~~~~g~~~a~n~g~~~a---~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~-~~~~v~~~~~~---------------~~ 133 (242)
.+...|.+. ...|++.. ..|+++++++|.. +++..+..+++.+.+. +.++++..... .+
T Consensus 77 ~~~~~Gt~~-i~~a~~~l~~~~~d~vlv~~gD~Pli~~~~i~~li~~~~~~~~~~~a~l~~~v~~~~~~~~p~~vkvv~d 155 (256)
T 3tqd_A 77 SDHQSGTER-IAEAAVALGFEDDEIIVCLQGDEPLIPPDAIRKLAEDLDEHDNVKVASLCTPITEVDELFNPHSTKVVLN 155 (256)
T ss_dssp TTCCSHHHH-HHHHHHHTTCCTTCEEEEECTTCCCCCHHHHHHHHHHHHHCC--CEEEEEEECCCHHHHTCTTSCEEEEC
T ss_pred CCCCCcHHH-HHHHHHHhCcCCCCEEEEEeCCcccCCHHHHHHHHHHHHhCCCCCEEEEeeEcCCHHHhhCCCccEEEEC
Confidence 344455544 56677765 5799999999985 7889999999988763 44554432211 00
Q ss_pred CCccCchhhHHHHHhHHHHHH--HHHhCCCccccccchhhcchHHHHHhhhcccCCCcccchHH--HHHHHHcCCceEEe
Q 026146 134 GGVHGWNLMRKLTSRGANVLA--QTLLWPGVSDLTGSFRLYKKSVLEDVISSCVSKGYVFQMEM--IVRACRKGYHIEEV 209 (242)
Q Consensus 134 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~rr~~~~~~~~~~~~~~~~~d~~~--~~~~~~~g~~i~~~ 209 (242)
.......+.+........... .............|..+|++++++++-.... ...|..|- .+|+...|++|...
T Consensus 156 ~~g~~l~fsr~pip~~r~~~~~~~~~~~~~~~~~~~GiY~y~~~~l~~~~~l~~--s~lE~~e~leqlr~le~G~~i~~~ 233 (256)
T 3tqd_A 156 RRNYALYFSHAPIPWGRDTFSDKENLQLNGSHYRHVGIYAYRVGFLEEYLSWDA--CPAEKMEALEQLRILWHGGRIHMV 233 (256)
T ss_dssp TTSBEEEEESSCSSCCTTTTTCGGGCCCSSCCEEEEEEEEEEHHHHHHHHHSCC--CHHHHHHTCTTHHHHHTTCCCEEE
T ss_pred CCCEEeEEecCCCCCCCcccccccccccCCcceEEEEEEEcCHHHHHHHHhCCC--CcccchhhhHHHHHHHCCCeEEEE
Confidence 100001111110000000000 0000001123456778999999999843321 12222221 25778999999887
Q ss_pred ee
Q 026146 210 PI 211 (242)
Q Consensus 210 p~ 211 (242)
..
T Consensus 234 ~~ 235 (256)
T 3tqd_A 234 VA 235 (256)
T ss_dssp EC
T ss_pred Ee
Confidence 64
No 27
>1omz_A Alpha-1,4-N-acetylhexosaminyltransferase EXTL2; rossmann fold, DXD motif; HET: UD2; 2.10A {Mus musculus} SCOP: c.68.1.15 PDB: 1omx_A* 1on6_A* 1on8_A*
Probab=96.67 E-value=0.002 Score=49.44 Aligned_cols=114 Identities=13% Similarity=0.131 Sum_probs=74.3
Q ss_pred CCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCC-hHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146 7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDG-TQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI 85 (242)
Q Consensus 7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~-t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n 85 (242)
....++++|-||++.+.|.+.++.+.+. . .--+|+||=++.... .......+.. . ...++++..+.|. -.+|-
T Consensus 26 ~~~~FTvvi~ty~R~~~L~~lv~~~~~~-~-~v~~IvVvWn~~~~~pp~~~~~~~~~-~-~vpv~v~~~~~ns--LnnRF 99 (293)
T 1omz_A 26 ALDSFTLIMQTYNRTDLLLRLLNHYQAV-P-SLHKVIVVWNNVGEKGPEELWNSLGP-H-PIPVIFKPQTANK--MRNRL 99 (293)
T ss_dssp CTTCEEEEEEESSCHHHHHHHHHHHTTS-T-TEEEEEEEECCTTCCCTHHHHHHTCC-C-SSCEEEEECSSCC--GGGGG
T ss_pred CCCceEEEEEeecccHHHHHHHHHHhcC-C-CCCeEEEEeCCCCCCCChhhccccCC-C-CccEEEEeCCCCc--hhhcc
Confidence 3467999999999887777777766433 1 234788776665433 3322322210 1 2458887766552 12222
Q ss_pred HHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146 86 HGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 126 (242)
Q Consensus 86 ~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~ 126 (242)
.-....+++.|+.+|+|..++.+-|+-..+.-++.+..+|+
T Consensus 100 ~p~~~i~T~AVLslDDDv~l~~~el~faF~vWr~~PdRlVG 140 (293)
T 1omz_A 100 QVFPEVETNAVLMVDDDTLISAQDLVFAFSIWQQFPDQIIG 140 (293)
T ss_dssp SCCTTCCSSEEEEECTTEEECHHHHHHHHHHHTTSTTSEEE
T ss_pred CCCccCCcCEEEEEcCCCCCCHHHHHHHHHHHHHCccceec
Confidence 33345578999999999999999898888888776655554
No 28
>1qwj_A Cytidine monophospho-N-acetylneuraminic acid synthetase; CMP-5-N-acetylneuraminic acid synthetase, CMP-NEU5AC, sialic acid, glycosylation; HET: NCC; 2.80A {Mus musculus} SCOP: c.68.1.13
Probab=96.38 E-value=0.057 Score=39.97 Aligned_cols=109 Identities=15% Similarity=0.101 Sum_probs=67.6
Q ss_pred CcEEEEEeCccc--------------cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC
Q 026146 9 NKYSIIIPTYNE--------------RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR 74 (242)
Q Consensus 9 ~~isiiip~~n~--------------~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~ 74 (242)
+++.+||++... ...+..+++.+.+.. .--+|+|+-+. +.+.++...++ +.++..
T Consensus 2 ~~~~aiIlA~G~s~R~~~K~l~~i~Gkpli~~~i~~~~~~~--~~~~ivv~~~~------~~i~~~~~~~g---~~~~~~ 70 (229)
T 1qwj_A 2 PHLAALVLARGGSKGIPLKNIKRLAGVPLIGWVLRAALDAG--VFQSVWVSTDH------DEIENVAKQFG---AQVHRR 70 (229)
T ss_dssp CCEEEEEECCSCCSSSSCTTTSEETTEEHHHHHHHHHHHHT--CCSEEEEEESC------HHHHHHHHHTT---CEEEEC
T ss_pred CcEEEEEEcCCCCCCCCCcccceECCEEHHHHHHHHHHhCC--CcCEEEEECCh------HHHHHHHHHcC---CEEEeC
Confidence 356667776532 345567777776552 11367777631 12333333332 333443
Q ss_pred C-----CCcchHHHHHHHHhhc-CCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEE
Q 026146 75 P-----KKLGLGTAYIHGLKHA-SGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGT 128 (242)
Q Consensus 75 ~-----~~~g~~~a~n~g~~~a-~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~ 128 (242)
+ ...+...+...|++.. ..|+++++++|.. +++..+..+++.+.+.+.+.++..
T Consensus 71 ~~~~~~~~~~~~~~v~~al~~~~~~d~vlv~~~D~Pli~~~~i~~l~~~~~~~~~~~~~~~ 131 (229)
T 1qwj_A 71 SSETSKDSSTSLDAIVEFLNYHNEVDIVGNIQATSPCLHPTDLQKVAEMIREEGYDSVFSV 131 (229)
T ss_dssp CGGGSSTTCCHHHHHHHHHTTCTTCSEEEEECTTCTTCCHHHHHHHHHHHHSSCCSEEEEE
T ss_pred hhhhcCCCCcHHHHHHHHHHhcCCCCEEEEecCCCCcCCHHHHHHHHHHHHhCCCCEEEEE
Confidence 2 2234456777888876 5799999999986 678899999998877666655443
No 29
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=96.17 E-value=0.065 Score=44.78 Aligned_cols=178 Identities=15% Similarity=0.174 Sum_probs=104.5
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCC---CEEEE
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASG---SFVVI 98 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~---d~i~~ 98 (242)
+.|...|+.+.+.- .-+|+||-.-..+.-.+.+.++...+ +..+.++..++..|-+.|...++..... +.+++
T Consensus 41 p~i~~~l~~~~~~g---~~~i~vv~~~~~~~i~~~~~~~~~~~-~~~i~~~~q~~~lGTa~Av~~a~~~l~~~~~~~~lv 116 (501)
T 3st8_A 41 SMLSHVLHAIAKLA---PQRLIVVLGHDHQRIAPLVGELADTL-GRTIDVALQDRPLGTGHAVLCGLSALPDDYAGNVVV 116 (501)
T ss_dssp EHHHHHHHHHHHHC---CSEEEEEECTTHHHHHHHHHHHHHHH-TSCCEEEECSSCCCHHHHHHHHHTTSCTTCCSEEEE
T ss_pred hHHHHHHHHHHhCC---CCEEEEEeCCCHHHHHHHHHHHHHhc-CCcEEEEEcCCCCCcHHHHHHHHHHhccccccceee
Confidence 46777888886652 33777776543333334444433333 3578888888889999999999988753 46777
Q ss_pred EeCCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCch----------hhHHHHHhHHHHHHHHHhCCCcccccc
Q 026146 99 MDADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWN----------LMRKLTSRGANVLAQTLLWPGVSDLTG 167 (242)
Q Consensus 99 lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~g 167 (242)
+.+|.. +..+.+..+++...+.+.++.+......+....+.- +..+........ .+....+
T Consensus 117 l~gd~~l~~~~~~~~l~~~h~~~~~~~ti~~~~~~dp~~yG~i~~~~~g~v~~ivEk~~~~~~~~--------~i~~in~ 188 (501)
T 3st8_A 117 TSGDTPLLDADTLADLIATHRAVSAAVTVLTTTLDDPFGYGRILRTQDHEVMAIVEQTDATPSQR--------EIREVNA 188 (501)
T ss_dssp EETTCTTCCHHHHHHHHHHHHHTTCSEEEEEEECSCCTTSCEEEECTTCCEEEEECGGGCCHHHH--------HCCEEEE
T ss_pred ecCcceeecHHHHHHHHHHHhhccccceEeeeccCCchhccccccccceeEEeeccccCCChhhc--------cceeeec
Confidence 777765 677889999988877777766554333322111100 000100000000 1223456
Q ss_pred chhhcchHHHHHhhhccc---CCCcccchHHHHHHHHcCCceEEeee
Q 026146 168 SFRLYKKSVLEDVISSCV---SKGYVFQMEMIVRACRKGYHIEEVPI 211 (242)
Q Consensus 168 ~~~~~rr~~~~~~~~~~~---~~~~~~d~~~~~~~~~~g~~i~~~p~ 211 (242)
+.+++..+.+.++..... .....+-.+....+...|..+.....
T Consensus 189 Giy~f~~~~l~~~l~~l~~~n~~~e~yltd~i~~~~~~g~~v~~~~~ 235 (501)
T 3st8_A 189 GVYAFDIAALRSALSRLSSNNAQQELYLTDVIAILRSDGQTVHASHV 235 (501)
T ss_dssp EEEEEEHHHHHHHHTTCCCCSTTCSCCTTHHHHHHHHTTCCEEEEEC
T ss_pred eeeeecchhHHHhhhhhcccccccccchhhHHHHHHhcCceEEEEec
Confidence 777899998888744322 11222234555667778887776653
No 30
>1h7e_A 3-deoxy-manno-octulosonate cytidylyltransferase; nucleotidyltransferase, CMP-KDO synthetase, nucleoside monophosphate glycosides; 1.83A {Escherichia coli} SCOP: c.68.1.13 PDB: 1gqc_A* 1gq9_A 1h6j_A 1h7f_A* 1h7g_A* 1h7h_A* 1h7t_A*
Probab=96.07 E-value=0.27 Score=36.57 Aligned_cols=95 Identities=13% Similarity=0.104 Sum_probs=58.9
Q ss_pred cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC--CCcchHHHHHHHHhhcCCCEEEE
Q 026146 21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP--KKLGLGTAYIHGLKHASGSFVVI 98 (242)
Q Consensus 21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~--~~~g~~~a~n~g~~~a~~d~i~~ 98 (242)
...+..+++.+.+.. ..-+|+|+-+. +.+.++...++ +.++..+ ...|.+.+. .|++....+++++
T Consensus 27 ~pli~~~i~~~~~~~--~~~~ivvv~~~------~~i~~~~~~~~---~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~lv 94 (245)
T 1h7e_A 27 KPMIQHVYERALQVA--GVAEVWVATDD------PRVEQAVQAFG---GKAIMTRNDHESGTDRLV-EVMHKVEADIYIN 94 (245)
T ss_dssp EEHHHHHHHHHHTCT--TCCEEEEEESC------HHHHHHHHHTT---CEEEECCSCCSSHHHHHH-HHHHHSCCSEEEE
T ss_pred chHHHHHHHHHHhCC--CCCeEEEECCc------HHHHHHHHHcC---CeEEeCCCccCCcHHHHH-HHHHhCCCCEEEE
Confidence 355667777775441 11377777642 23344444332 4455532 234554444 5666667799999
Q ss_pred EeCCCC-CCCCChHHHHHHHHhc-CCcEEEE
Q 026146 99 MDADLS-HHPKYLPSFIKKQLET-GASIVTG 127 (242)
Q Consensus 99 lD~D~~-~~~~~l~~l~~~~~~~-~~~~v~~ 127 (242)
+++|.. +++..+..+++.+.+. +.++++.
T Consensus 95 ~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~~ 125 (245)
T 1h7e_A 95 LQGDEPMIRPRDVETLLQGMRDDPALPVATL 125 (245)
T ss_dssp CCTTCTTCCHHHHHHHHHHHHHCTTCCEEEE
T ss_pred EcCCcCcCCHHHHHHHHHHHHhCCCCCEEEE
Confidence 999986 6888999999988766 6666543
No 31
>1e5k_A Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin nucleotidyl-transferase,; HET: CIT; 1.35A {Escherichia coli} SCOP: c.68.1.8 PDB: 1h4e_A* 1hjl_A* 1hjj_A* 1h4c_A* 1h4d_A* 1fr9_A 1frw_A*
Probab=95.94 E-value=0.029 Score=40.74 Aligned_cols=89 Identities=9% Similarity=0.111 Sum_probs=58.5
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC-CC-cchHHHHHHHHhhcCCCEEEEE
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP-KK-LGLGTAYIHGLKHASGSFVVIM 99 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~-~~-~g~~~a~n~g~~~a~~d~i~~l 99 (242)
..+..+++.+.... -+|+|+.+.. ... +. .. .+.++... .. .|...+...|++....++++++
T Consensus 34 pli~~~l~~l~~~~----~~ivvv~~~~---~~~-~~----~~---~~~~v~~~~~~~~G~~~si~~~l~~~~~~~vlv~ 98 (201)
T 1e5k_A 34 PLWQHVADALMTQL----SHVVVNANRH---QEI-YQ----AS---GLKVIEDSLADYPGPLAGMLSVMQQEAGEWFLFC 98 (201)
T ss_dssp EHHHHHHHHHHHHC----SCEEEECSSS---HHH-HH----TT---SCCEECCCTTCCCSHHHHHHHHHHHCCSSEEEEE
T ss_pred eHHHHHHHHHHhhC----CEEEEEcCCc---HHH-Hh----hc---CCeEEecCCCCCCCHHHHHHHHHHhCCCCcEEEE
Confidence 45566777776431 2577775432 111 21 11 34445443 22 5899999999999889999999
Q ss_pred eCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146 100 DADLS-HHPKYLPSFIKKQLETGASIVTG 127 (242)
Q Consensus 100 D~D~~-~~~~~l~~l~~~~~~~~~~~v~~ 127 (242)
++|.. ++++.++.+++. +.+.++++.
T Consensus 99 ~~D~P~i~~~~i~~l~~~--~~~~~~~~~ 125 (201)
T 1e5k_A 99 PCDTPYIPPDLAARLNHQ--RKDAPVVWV 125 (201)
T ss_dssp ETTCTTCCTTHHHHHHHT--CTTCSEEEE
T ss_pred eCCcCcCCHHHHHHHHhh--cCCCCEEEE
Confidence 99984 788889998876 345666554
No 32
>3ngw_A Molybdopterin-guanine dinucleotide biosynthesis P (MOBA); alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.31A {Archaeoglobus fulgidus}
Probab=95.94 E-value=0.051 Score=39.70 Aligned_cols=94 Identities=17% Similarity=0.198 Sum_probs=64.5
Q ss_pred cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC-CCCcchHHHHHHHHhhcCCCEEE
Q 026146 19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR-PKKLGLGTAYIHGLKHASGSFVV 97 (242)
Q Consensus 19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~-~~~~g~~~a~n~g~~~a~~d~i~ 97 (242)
+....+..+++.+.+. +|+||-+. .+.++.+...+ .+.++.. ....|...+...|++.+ .+++
T Consensus 24 ~G~pli~~~~~~l~~~------~vvvv~~~-----~~~~~~~~~~~---~~~~v~d~~~~~G~~~si~~gl~~~-~~~v- 87 (208)
T 3ngw_A 24 CGKKLIEWVLEKYSPF------QTVFVCRD-----EKQAEKLSSRY---EAEFIWDLHKGVGSIAGIHAALRHF-GSCV- 87 (208)
T ss_dssp TTEEHHHHHHHHHTTS------EEEEECSS-----HHHHHHHHTTS---CSCEECCTTCCCSHHHHHHHHHHHH-SSEE-
T ss_pred CCeeHHHHHHHHhcCC------CEEEEECC-----HHHHHHHHHhc---CCeEEecCCCCCChHHHHHHHHHHc-CCCE-
Confidence 4556677777777432 78888642 23344443322 2344433 23357889999999999 8999
Q ss_pred EEeCCCC-CCCCChHHHHHHHHhcCCcEEEEE
Q 026146 98 IMDADLS-HHPKYLPSFIKKQLETGASIVTGT 128 (242)
Q Consensus 98 ~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~ 128 (242)
++.+|.. ++++.+..+++.+.+.+.++++..
T Consensus 88 v~~~D~P~i~~~~i~~l~~~~~~~~~~~v~~~ 119 (208)
T 3ngw_A 88 VAAIDMPFVKPEVLEHLYKEGEKAGCDALIPK 119 (208)
T ss_dssp EEETTCTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred EEECCccCCCHHHHHHHHHHhhcCCCCEEEEc
Confidence 9999986 789999999998876577777654
No 33
>1ezi_A CMP-N-acetylneuraminic acid synthetase; homodimer, alpha-beta-alpha, transferase; 2.00A {Neisseria meningitidis} SCOP: c.68.1.13 PDB: 1eyr_A
Probab=95.87 E-value=0.084 Score=38.95 Aligned_cols=108 Identities=14% Similarity=0.125 Sum_probs=66.6
Q ss_pred CcEEEEEeCcccc--------------ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC
Q 026146 9 NKYSIIIPTYNER--------------LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR 74 (242)
Q Consensus 9 ~~isiiip~~n~~--------------~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~ 74 (242)
+++.+||++-... ..+..+++.+.+.. .--+|+|+.+. + .+.++...++ +.++..
T Consensus 3 m~~~aiIlA~G~g~R~~~K~l~~i~gkpll~~~l~~~~~~~--~~~~ivvv~~~--~----~i~~~~~~~~---~~~~~~ 71 (228)
T 1ezi_A 3 KQNIAVILARQNSKGLPLKNLRKMNGISLLGHTINAAISSK--CFDRIIVSTDG--G----LIAEEAKNFG---VEVVLR 71 (228)
T ss_dssp CEEEEEEECCSSCSSSTTTTTCEETTEEHHHHHHHHHHHHC--CCSEEEEEESC--H----HHHHHHHHTT---CEEEEC
T ss_pred CceEEEEecCCCCCCCCCcccceeCCcCHHHHHHHHHHhCC--CCCEEEEECCC--H----HHHHHHHHcC---CEEEeC
Confidence 4577788775433 44567777776542 12377777652 1 1233333332 333333
Q ss_pred C-----CCcchHHHHHHHHhhcC--CCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146 75 P-----KKLGLGTAYIHGLKHAS--GSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTG 127 (242)
Q Consensus 75 ~-----~~~g~~~a~n~g~~~a~--~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~ 127 (242)
+ ...|...+...|++... .++++++++|.. +++..+..+++.+.+.+.++++.
T Consensus 72 ~~~~~~~~~g~~~sv~~~l~~~~~~~d~vlv~~~D~P~~~~~~i~~l~~~~~~~~~~~~~~ 132 (228)
T 1ezi_A 72 PAELASDTASSISGVIHALETIGSNSGTVTLLQPTSPLRTGAHIREAFSLFDEKIKGSVVS 132 (228)
T ss_dssp CC------CHHHHHHHHHHHHHTCCSEEEEECCTTCTTCCHHHHHHHHTTCCTTTCCCEEE
T ss_pred chHHcCCCCChHHHHHHHHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCEEEE
Confidence 2 23456777888888763 589999999986 67888999988776555555544
No 34
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A*
Probab=95.63 E-value=0.026 Score=43.29 Aligned_cols=94 Identities=12% Similarity=-0.005 Sum_probs=64.3
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH-----------------------hCCCcEEEeeCCCCc
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL-----------------------YGEDRILLRPRPKKL 78 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~-----------------------~~~~~~~~~~~~~~~ 78 (242)
..|..+++.+.+. .--+|+|+-.... +.++++... ..+..+.++..+...
T Consensus 34 pli~~~l~~l~~~---gi~~i~vv~~~~~----~~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 106 (281)
T 3juk_A 34 PLIQYAVEEAMEA---GCEVMAIVTGRNK----RSLEDYFDTSYEIEHQIQGTNKENALKSIRNIIEKCCFSYVRQKQMK 106 (281)
T ss_dssp BHHHHHHHHHHHH---TCCEEEEEECTTH----HHHHHHTSCCC--------CCHHHHHHHHHHHHHHCEEEEEECSSCC
T ss_pred EHHHHHHHHHHhC---CCCEEEEEecCCH----HHHHHHHhcchhhhhhhhcccchhhhhhhhccccCccEEEEecCCCC
Confidence 6778888888765 2236777765221 122222111 012356677777778
Q ss_pred chHHHHHHHHhhcCCCEEEEEeCCCCCCCC----ChHHHHHHHHhcCC
Q 026146 79 GLGTAYIHGLKHASGSFVVIMDADLSHHPK----YLPSFIKKQLETGA 122 (242)
Q Consensus 79 g~~~a~n~g~~~a~~d~i~~lD~D~~~~~~----~l~~l~~~~~~~~~ 122 (242)
|.+.+...|+.....+.++++.+|..++++ .+..+++.+.+.+.
T Consensus 107 Gt~~al~~a~~~l~~~~~lv~~~D~~~~~~~~~~~l~~l~~~~~~~~~ 154 (281)
T 3juk_A 107 GLGHAILTGEALIGNEPFAVILADDLCISHDHPSVLKQMTSLYQKYQC 154 (281)
T ss_dssp CHHHHHHHTHHHHCSSCEEEECTTEEEECTTSCCHHHHHHHHHHHHCS
T ss_pred CcHHHHHHHHHHcCCCCEEEEeCCeeccCccchHHHHHHHHHHHHcCC
Confidence 999999999988877889999999987777 69999988776555
No 35
>1vgw_A 4-diphosphocytidyl-2C-methyl-D-erythritol synthas; structural genomics, transferase; 2.35A {Neisseria gonorrhoeae} SCOP: c.68.1.13 PDB: 1vgz_A
Probab=95.51 E-value=0.47 Score=34.81 Aligned_cols=91 Identities=10% Similarity=0.025 Sum_probs=57.2
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc-------CCC
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA-------SGS 94 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a-------~~d 94 (242)
..+..+++.+.+.. ..-+|+|+-+...+...+ +.+ ++...+.++ ....|.+.+.-.|++.. ..+
T Consensus 35 pli~~~l~~l~~~~--~~~~ivvv~~~~~~~~~~-~~~----~~~~~i~~~--~~~~~~~~si~~~l~~~~~~~~~~~~~ 105 (231)
T 1vgw_A 35 TVLEHVLGIFERHE--AVDLTVVVVSPEDTFADK-VQT----AFPQVRVWK--NGGQTRAETVRNGVAKLLETGLAAETD 105 (231)
T ss_dssp EHHHHHHHHHHTCT--TCCEEEEECCTTCSTHHH-HHH----HCTTSEEEC--CCCSSHHHHHHHHHHHHHHHSSSCTTS
T ss_pred EHHHHHHHHHHcCC--CCCeEEEEECccHHHHHH-HHh----cCCCceEEE--cCCCcHHHHHHHHHHHHhhhccCCCCC
Confidence 45566777665431 123677776543333322 322 221246555 23467888888888765 469
Q ss_pred EEEEEeCCCC-CCCCChHHHHHHHHhcC
Q 026146 95 FVVIMDADLS-HHPKYLPSFIKKQLETG 121 (242)
Q Consensus 95 ~i~~lD~D~~-~~~~~l~~l~~~~~~~~ 121 (242)
+++++++|.. ++++.+..+++.+.+.+
T Consensus 106 ~vlv~~~D~p~~~~~~i~~l~~~~~~~~ 133 (231)
T 1vgw_A 106 NILVHDAARCCLPSEALARLIEQAGNAA 133 (231)
T ss_dssp EEEECCTTCTTCCHHHHHHHHHHHTTCT
T ss_pred EEEEEcCCcccCCHHHHHHHHHHHhhcC
Confidence 9999999975 67888999998876543
No 36
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A*
Probab=95.23 E-value=0.12 Score=39.33 Aligned_cols=175 Identities=11% Similarity=0.034 Sum_probs=95.2
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH--hCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEE
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL--YGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIM 99 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~--~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~l 99 (242)
..|..+++++.+. .--+|+|+-+... ..++ .++... ..+..+.+...+...|.+.++..+++....+.++++
T Consensus 56 pli~~~l~~l~~~---g~~~iivv~~~~~--~~~~-~~~~~~~~~~~~~i~~~~~~~~~G~~~al~~a~~~~~~~~~lv~ 129 (269)
T 4ecm_A 56 PMIYHAVYKLKQC---DITDIMIITGKEH--MGDV-VSFLGSGQEFGVSFTYRVQDKAGGIAQALGLCEDFVGNDRMVVI 129 (269)
T ss_dssp EHHHHHHHHHHHT---TCCEEEEEECTTT--HHHH-HHHHTTSGGGTCEEEEEECSSCCCHHHHHHTTHHHHTTSEEEEE
T ss_pred EHHHHHHHHHHHC---CCCEEEEECChhh--HHHH-HHHHhhccccCceEEEeeCCccCcHHHHHHHHHHhcCCCcEEEE
Confidence 4456677777654 2236777765321 1222 333221 112356666666677999999988888778999999
Q ss_pred eCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHH---hCCCccccccchhhcchHH
Q 026146 100 DADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTL---LWPGVSDLTGSFRLYKKSV 176 (242)
Q Consensus 100 D~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~rr~~ 176 (242)
.+|..+. ..+..+++.+.+.+.++++......+.. .+.....-. ..+.... ..+......++.+++++++
T Consensus 130 ~~D~~~~-~~l~~l~~~~~~~~~~~~~~~~~~~~~~--~~g~v~~d~----g~v~~~~ekp~~~~~~~~~~Giy~~~~~~ 202 (269)
T 4ecm_A 130 LGDNIFS-DDIRPYVEEFTNQKEGAKVLLQSVDDPE--RFGVANIQN----RKIIEIEEKPKEPKSSYAVTGIYLYDSKV 202 (269)
T ss_dssp ETTEEES-SCSHHHHHHHHTSSSSEEEEEEECSCGG--GSEEEEEET----TEEEEEEESCSSCSCSEEEEEEEEECTTH
T ss_pred eCCccCc-cCHHHHHHHHHhcCCCeEEEEEECCCCC--CceEEEEcC----CEEEEEEECCCCCCCcEEEEEEEEECHHH
Confidence 9998775 6788888888766666655433222111 000000000 0000000 0112234567778999999
Q ss_pred HHHhhhcccC-CCcccchHHHHHHHHcCCceEEee
Q 026146 177 LEDVISSCVS-KGYVFQMEMIVRACRKGYHIEEVP 210 (242)
Q Consensus 177 ~~~~~~~~~~-~~~~~d~~~~~~~~~~g~~i~~~p 210 (242)
++.+...... .+-.+-.++...+...| ++...+
T Consensus 203 l~~l~~~~~~~~ge~~l~d~l~~l~~~g-~v~~~~ 236 (269)
T 4ecm_A 203 FSYIKELKPSARGELEITDINNWYLKRG-VLTYNE 236 (269)
T ss_dssp HHHHTSCCBCTTSCBCHHHHHHHHHHTT-CEEEEE
T ss_pred HHhhhhcCCCCCCeeeHHHHHHHHHHcC-CEEEEE
Confidence 9766321111 11112245666677777 665544
No 37
>2wee_A MOBA-related protein; unknown function; 1.65A {Mycobacterium tuberculosis H37RV} PDB: 2we9_A 2yes_A
Probab=95.20 E-value=0.023 Score=40.89 Aligned_cols=94 Identities=14% Similarity=0.065 Sum_probs=58.3
Q ss_pred cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC-CCcchHHHHHHHHhhc--CCCEEE
Q 026146 21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP-KKLGLGTAYIHGLKHA--SGSFVV 97 (242)
Q Consensus 21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~-~~~g~~~a~n~g~~~a--~~d~i~ 97 (242)
...+..+++.+.+.. .-+|+|+-+.. .+.+.++.... .+.++..+ ...|...+...|++.. ..++++
T Consensus 31 ~pll~~~l~~l~~~~---~~~i~vv~~~~----~~~~~~~~~~~---~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vl 100 (197)
T 2wee_A 31 TTVLGATLDVARQAG---FDQLILTLGGA----ASAVRAAMALD---GTDVVVVEDVERGCAASLRVALARVHPRATGIV 100 (197)
T ss_dssp EEHHHHHHHHHHHTT---CSEEEEEECTT----HHHHHHHSCCT---TSEEEECC----CCHHHHHHHHTTSCTTEEEEE
T ss_pred ccHHHHHHHHHHhcC---CCcEEEEeCCC----HHHHHHHhccC---CCEEEECCCcccCHHHHHHHHHHHhcccCCeEE
Confidence 355667777776541 22677775432 12233332221 34455433 3458889999999887 468999
Q ss_pred EEeCCCC-CCCCChHHHHHHHHhcCCcEEE
Q 026146 98 IMDADLS-HHPKYLPSFIKKQLETGASIVT 126 (242)
Q Consensus 98 ~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~ 126 (242)
++++|.. +++..+..+++. . .+.++++
T Consensus 101 v~~~D~P~~~~~~i~~l~~~-~-~~~~i~~ 128 (197)
T 2wee_A 101 LMLGDQPQVAPATLRRIIDV-G-PATEIMV 128 (197)
T ss_dssp EEETTCTTCCHHHHHHHHHH-G-GGSSEEE
T ss_pred EEeCCcCCCCHHHHHHHHhh-c-CCCCEEE
Confidence 9999985 788889999887 3 4455543
No 38
>2waw_A MOBA relate protein; unknown function; HET: PGE; 1.60A {Mycobacterium SP}
Probab=95.17 E-value=0.027 Score=40.54 Aligned_cols=93 Identities=17% Similarity=0.145 Sum_probs=58.4
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC-CCcchHHHHHHHHhhc--CCCEEEE
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP-KKLGLGTAYIHGLKHA--SGSFVVI 98 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~-~~~g~~~a~n~g~~~a--~~d~i~~ 98 (242)
..+..+++.+.+. ..-+|+|+.+... +.++++...+ .+.++..+ ...|...+...|++.. ..+++++
T Consensus 32 pli~~~l~~l~~~---~~~~i~vv~~~~~----~~~~~~~~~~---~~~~~~~~~~~~g~~~~i~~al~~~~~~~~~vlv 101 (199)
T 2waw_A 32 TLLGATLAMARRC---PFDQLIVTLGGAA----DEVLEKVELD---GLDIVLVDDAGLGCSSSLKSALTWVDPTAEGIVL 101 (199)
T ss_dssp EHHHHHHHHHHTS---SCSEEEEEECTTH----HHHHHHSCCT---TSEEEECCCCCTTCCCHHHHHHHTSCTTCSEEEE
T ss_pred CHHHHHHHHHHhC---CCCcEEEEeCCCH----HHHHHHhccC---CCEEEECCCcccCHHHHHHHHHHhhhccCCeEEE
Confidence 4556667666543 2236777765321 2233332222 24444432 3457788899999887 5799999
Q ss_pred EeCCCC-CCCCChHHHHHHHHhcCCcEEE
Q 026146 99 MDADLS-HHPKYLPSFIKKQLETGASIVT 126 (242)
Q Consensus 99 lD~D~~-~~~~~l~~l~~~~~~~~~~~v~ 126 (242)
+++|.. +++..+..+++. +.+.++++
T Consensus 102 ~~~D~P~~~~~~i~~l~~~--~~~~~~~~ 128 (199)
T 2waw_A 102 MLGDQPGITASAVASLIAG--GRGATIAV 128 (199)
T ss_dssp EETTCTTCCHHHHHHHHHH--HTTCSEEE
T ss_pred EeCCcccCCHHHHHHHHhh--cCCCCEEE
Confidence 999987 688889998887 34556554
No 39
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=95.05 E-value=0.19 Score=38.43 Aligned_cols=107 Identities=6% Similarity=0.042 Sum_probs=65.3
Q ss_pred CCCcEEEEEeCcc-ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCC-cc-----
Q 026146 7 NKNKYSIIIPTYN-ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKK-LG----- 79 (242)
Q Consensus 7 ~~~~isiiip~~n-~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~-~g----- 79 (242)
+++.+.|++.+=+ -...+.-++.|+.+......+.++|+.++-+++..+.++++...++ ..+.++.-+.. ..
T Consensus 2 ~~m~i~I~~~~d~~Y~~~~~v~i~Sl~~~~~~~~~~~~il~~~is~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~~~~~~ 80 (276)
T 3tzt_A 2 NAMADALLLTLDENYIPQMKVLMTSIYINNPGRIFDVYLIHSRISEDKLKDLGEDLKKFS-YTLYPIRATDDLFSFAKVT 80 (276)
T ss_dssp ---CEEEEEECCGGGHHHHHHHHHHHHHHSTTCCEEEEEEESCCCHHHHHHHHHHHHTTT-CEEEEEECC----------
T ss_pred CceeEEEEEEeCHhHHHHHHHHHHHHHHhCCCCceEEEEEeCCCCHHHHHHHHHHHHHcC-CEEEEEEeCHHHHhcCccc
Confidence 3467888877733 3456677888888775434788999988877777788888766543 45666654421 11
Q ss_pred -----hHHHHHHHHhhc--CCCEEEEEeCCCCCCCCChHHHHH
Q 026146 80 -----LGTAYIHGLKHA--SGSFVVIMDADLSHHPKYLPSFIK 115 (242)
Q Consensus 80 -----~~~a~n~g~~~a--~~d~i~~lD~D~~~~~~~l~~l~~ 115 (242)
....+-...+.. ..+-+++||+|.++-. -+.++.+
T Consensus 81 ~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~-di~~L~~ 122 (276)
T 3tzt_A 81 DRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVIN-PLDDLLR 122 (276)
T ss_dssp ---CHHHHHHHTHHHHSCTTCCEEEEECSSEEECS-CSHHHHT
T ss_pred cccCHHHHHHHHHHHHcccccCeEEEEeCCeeecC-CHHHHhh
Confidence 111222222232 3589999999987654 4555554
No 40
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus}
Probab=94.90 E-value=0.21 Score=36.88 Aligned_cols=87 Identities=14% Similarity=0.120 Sum_probs=54.5
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeC
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDA 101 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~ 101 (242)
..+..+++.+.+. - . +|+|+-+. +.+.++...+ ..+.+.......|.+.+. .|++....++++++++
T Consensus 28 pli~~~l~~~~~~-~-~--~i~v~~~~------~~i~~~~~~~--~~~~~~~~~~~~g~~~~~-~~~~~~~~~~vlv~~~ 94 (234)
T 2y6p_A 28 PLIRWVVEGLVKT-G-E--RVILATDS------ERVKEVVEDL--CEVFLTPSDLPSGSDRVL-YVVRDLDVDLIINYQG 94 (234)
T ss_dssp EHHHHHHHHHHTT-T-S--CEEEEESC------HHHHHHHTTT--SEEEECCTTCCSHHHHHH-HHHTTCCCSEEEECCT
T ss_pred EHHHHHHHHHHHh-C-C--EEEEECCh------HHHHHHHHhc--eEEEECCcccccchHHHH-HHHHhCCCCEEEEecC
Confidence 5567778877655 2 2 56666542 2233333322 233322223345666655 5777777899999999
Q ss_pred CC-CCCCCChHHHHHHHHhcC
Q 026146 102 DL-SHHPKYLPSFIKKQLETG 121 (242)
Q Consensus 102 D~-~~~~~~l~~l~~~~~~~~ 121 (242)
|. .+++..+..+++.+.+.+
T Consensus 95 D~P~~~~~~i~~l~~~~~~~~ 115 (234)
T 2y6p_A 95 DEPFVYEEDIKLIFRELEKGE 115 (234)
T ss_dssp TCCCCCHHHHHHHHHHHHHTC
T ss_pred CcCcCCHHHHHHHHHHHHhCC
Confidence 99 677789999998887655
No 41
>1i52_A 4-diphosphocytidyl-2-C-methylerythritol synthase; cytidylyltransferase, deoxyxylulose-5-phosphate pathway (DXP isoprenoid biosynthesys, MEP; HET: CTP; 1.50A {Escherichia coli} SCOP: c.68.1.13 PDB: 1ini_A* 1inj_A 1vgt_A 1vgu_A 3n9w_A 1h3m_A
Probab=94.74 E-value=0.14 Score=37.93 Aligned_cols=105 Identities=13% Similarity=0.137 Sum_probs=64.7
Q ss_pred CCcEEEEEeCccc-----------------cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEE
Q 026146 8 KNKYSIIIPTYNE-----------------RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRIL 70 (242)
Q Consensus 8 ~~~isiiip~~n~-----------------~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~ 70 (242)
++++.+||++-.. ...+..+++.+.+.. ..-+|+|+-+...+...+ +. .++...+.
T Consensus 5 ~~~~~~iIlA~G~g~R~~~~~~K~l~~i~g~pll~~~i~~l~~~~--~~~~ivvv~~~~~~~~~~-~~----~~~~~~v~ 77 (236)
T 1i52_A 5 HLDVCAVVPAAGFGRRMQTECPKQYLSIGNQTILEHSVHALLAHP--RVKRVVIAISPGDSRFAQ-LP----LANHPQIT 77 (236)
T ss_dssp CCCEEEEEEECCCCGGGCCSSCGGGSEETTEEHHHHHHHHHHTST--TEEEEEEEECTTCCSGGG-SG----GGGCTTEE
T ss_pred CCceeEEEECCcCccccCCCCCcceeeECCEEHHHHHHHHHHhCC--CCCeEEEEeCccHHHHHH-HH----hcCCCCEE
Confidence 4567777776432 234455666664321 123677776544333322 22 22212465
Q ss_pred EeeCCCCcchHHHHHHHHhhcC-CCEEEEEeCCCC-CCCCChHHHHHHHHhcC
Q 026146 71 LRPRPKKLGLGTAYIHGLKHAS-GSFVVIMDADLS-HHPKYLPSFIKKQLETG 121 (242)
Q Consensus 71 ~~~~~~~~g~~~a~n~g~~~a~-~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~ 121 (242)
++.. ..|...+...|++... .++++++++|.. ++++.+..+++.+.+.+
T Consensus 78 ~~~~--~~g~~~~i~~al~~~~~~~~~lv~~~D~P~~~~~~i~~l~~~~~~~~ 128 (236)
T 1i52_A 78 VVDG--GDERADSVLAGLKAAGDAQWVLVHDAARPCLHQDDLARLLALSETSR 128 (236)
T ss_dssp EEEC--CSSHHHHHHHHHHTSTTCSEEEECCTTCTTCCHHHHHHHHGGGGTCS
T ss_pred EECC--CCCHHHHHHHHHHhcCCCCEEEEEcCccccCCHHHHHHHHHHHHhcC
Confidence 5543 2478888888998874 799999999976 68888999888776544
No 42
>3d5n_A Q97W15_sulso; NESG, SSR125, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.80A {Sulfolobus solfataricus}
Probab=94.36 E-value=0.017 Score=41.75 Aligned_cols=90 Identities=17% Similarity=0.145 Sum_probs=56.8
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC-CcchHHHHHHHHhhcCC-CEEEEE
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK-KLGLGTAYIHGLKHASG-SFVVIM 99 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~-~~g~~~a~n~g~~~a~~-d~i~~l 99 (242)
..+..+++.+.+. +++||-+.. .+.++++.. ..+ ++..+. ..|...+...|++.... ++++++
T Consensus 29 pll~~~l~~l~~~------~ivvv~~~~----~~~~~~~~~----~~~-~v~~~~~~~G~~~si~~al~~~~~~~~vlv~ 93 (197)
T 3d5n_A 29 PIIMRTIRIYGDL------EKIIIVGKY----VNEMLPLLM----DQI-VIYNPFWNEGISTSLKLGLRFFKDYDAVLVA 93 (197)
T ss_dssp BHHHHHHHHTTTS------BCCEEECTT----HHHHGGGCT----TSC-EEECTTGGGCHHHHHHHHHHHTTTSSEEEEE
T ss_pred EHHHHHHHHHHhC------CEEEEECCC----HHHHHHHhc----CCE-EEECCCCCCCHHHHHHHHHHhhccCCcEEEE
Confidence 4455555555322 666665532 122333221 134 454432 35888899999988865 899999
Q ss_pred eCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146 100 DADLS-HHPKYLPSFIKKQLETGASIVTG 127 (242)
Q Consensus 100 D~D~~-~~~~~l~~l~~~~~~~~~~~v~~ 127 (242)
++|.. ++++.++.+++.+ +.+.++++.
T Consensus 94 ~~D~P~i~~~~i~~l~~~~-~~~~~~~~~ 121 (197)
T 3d5n_A 94 LGDMPFVTKEDVNKIINTF-KPNCKAVIP 121 (197)
T ss_dssp ETTCCCSCHHHHHHHHHTC-CTTCSEEEE
T ss_pred eCCccccCHHHHHHHHHHh-cCCCcEEEE
Confidence 99985 6888899988877 455666554
No 43
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=94.33 E-value=0.069 Score=43.90 Aligned_cols=177 Identities=14% Similarity=0.125 Sum_probs=92.0
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC-CCEEEEEe
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS-GSFVVIMD 100 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-~d~i~~lD 100 (242)
..+..+++.+.+.- --+++|+-+.. .+.++++.... .+.++..+...|.+.+...|++... .+++++++
T Consensus 37 pli~~~l~~l~~~~---~~~i~vv~~~~----~~~i~~~~~~~---~~~~v~~~~~~g~~~~i~~~~~~~~~~~~~lv~~ 106 (459)
T 4fce_A 37 PMVQHVIDAAMKLG---AQHVHLVYGHG----GELLKKTLADP---SLNWVLQAEQLGTGHAMQQAAPHFADDEDILMLY 106 (459)
T ss_dssp EHHHHHHHHHHHHT---CSCEEEEESSC----HHHHHHHC--------CEEECSSCCCHHHHHHHHGGGSCTTSEEEEEE
T ss_pred eHHHHHHHHHHhCC---CCcEEEEeCCC----HHHHHHHhccC---CcEEEeCCCCCCcHHHHHHHHHhcCCCCcEEEEe
Confidence 45677778776652 22567665532 23333333222 3556666667889999999999886 49999999
Q ss_pred CCCC-CCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHh---CCCccccccchhhcchHH
Q 026146 101 ADLS-HHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLL---WPGVSDLTGSFRLYKKSV 176 (242)
Q Consensus 101 ~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~~~rr~~ 176 (242)
+|.. +++..++++++.+.+ .++++......+....+. .... .........+... ........++.++++++.
T Consensus 107 ~D~P~i~~~~i~~l~~~~~~--~~~~~~~~~~~~~~~~g~-v~~~-~g~v~~~~ek~~~~~~~~~~~~~~~Giy~~~~~~ 182 (459)
T 4fce_A 107 GDVPLISVDTLQRLLAAKPE--GGIGLLTVKLDNPSGYGR-IVRE-NGDVVGIVEHKDASDAQREINEINTGILVANGRD 182 (459)
T ss_dssp TTCTTCCHHHHHHHHHHCCT--TSEEEEEEECSCCTTSCE-EEEE-TTEEEEEECGGGCCTTGGGCCEEEEEEEEEEHHH
T ss_pred CCcccCCHHHHHHHHHHHhh--CCEEEEEEecCCCCcccE-EEeC-CCcEEEEEECCCCChHHhhccEEEEEEEEEEHHH
Confidence 9984 788889999888754 344333222111110000 0000 0000000000000 001122346677889887
Q ss_pred HHHhhhccc---CCCcccchHHHHHHHHcCCceEEeeee
Q 026146 177 LEDVISSCV---SKGYVFQMEMIVRACRKGYHIEEVPIT 212 (242)
Q Consensus 177 ~~~~~~~~~---~~~~~~d~~~~~~~~~~g~~i~~~p~~ 212 (242)
+.+...... ...-.+-.+....+.+.|.++..++..
T Consensus 183 l~~~l~~~~~~~~~~~~~~~d~~~~~~~~g~~v~~~~~~ 221 (459)
T 4fce_A 183 LKRWLSLLDNNNAQGEFYITDIIALAHADGKKIATVHPT 221 (459)
T ss_dssp HHHHHHTCCCCSTTCSCCTTHHHHHHHHTTCCEEEECCS
T ss_pred HHHHHHHhCccccCCcEEHHHHHHHHHHCCCeEEEEEcC
Confidence 765522211 111112245666778889888777643
No 44
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea}
Probab=93.96 E-value=0.077 Score=40.99 Aligned_cols=56 Identities=16% Similarity=0.184 Sum_probs=45.0
Q ss_pred CcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeCCCCCC--CCChHHHHHHHHhcCC
Q 026146 67 DRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHH--PKYLPSFIKKQLETGA 122 (242)
Q Consensus 67 ~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~~~--~~~l~~l~~~~~~~~~ 122 (242)
..+.++..+...|.+.+...|+.....+.++++.+|..++ +..+..+++...+.+.
T Consensus 106 ~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~l~~l~~~~~~~~~ 163 (297)
T 2ux8_A 106 GNIAYVRQQEPMGLGHAVWCARDIVGDEPFAVLLPDDFMFGQPGCLKQMVDAYNKVGG 163 (297)
T ss_dssp TSEEEEECCSCCCHHHHHHTTHHHHCSSCEEEECTTEEEESSSCHHHHHHHHHHHHCS
T ss_pred CceEEEeCCCCCChHHHHHHHHHHcCCCcEEEEeCCeecCCChHHHHHHHHHHHhcCC
Confidence 3577777666789999999888877678999999999877 6789999988766554
No 45
>4fcu_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.90A {Acinetobacter baumannii} PDB: 3pol_A
Probab=93.91 E-value=0.46 Score=35.75 Aligned_cols=95 Identities=15% Similarity=0.118 Sum_probs=57.5
Q ss_pred cccHHHHH-HHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc---CCCEE
Q 026146 21 RLNIALIV-YLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA---SGSFV 96 (242)
Q Consensus 21 ~~~l~~~l-~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a---~~d~i 96 (242)
...+..++ +.+.+. .--+|+|+-+. +.+.++...++ ..+.+...+...|. .+...|++.. ..|++
T Consensus 26 kPli~~~i~~~~~~~---~~~~vvVvt~~------~~i~~~~~~~g-~~v~~~~~~~~~Gt-~~i~~a~~~~~~~~~d~v 94 (253)
T 4fcu_A 26 RPMILRVVDQAKKVE---GFDDLCVATDD------ERIAEICRAEG-VDVVLTSADHPSGT-DRLSEVARIKGWDADDII 94 (253)
T ss_dssp EEHHHHHHHHHHTCT---TCCEEEEEESC------HHHHHHHHTTT-CCEEECCTTCCCHH-HHHHHHHHHHTCCTTCEE
T ss_pred eEhHHHHHHHHHHhc---CCCEEEEECCH------HHHHHHHHHcC-CeEEEeCCCCCChH-HHHHHHHHhcCcCCCCEE
Confidence 34566677 666543 22367777652 22344444333 34443333333443 3566667665 36999
Q ss_pred EEEeCCCC-CCCCChHHHHHHHHhc-CCcEEE
Q 026146 97 VIMDADLS-HHPKYLPSFIKKQLET-GASIVT 126 (242)
Q Consensus 97 ~~lD~D~~-~~~~~l~~l~~~~~~~-~~~~v~ 126 (242)
+++++|.. ++++.+..+++.+.+. +.++++
T Consensus 95 lv~~gD~Pli~~~~i~~li~~~~~~~~~~~at 126 (253)
T 4fcu_A 95 VNVQGDEPLLPAQLVQQVAKLLVDKPNCSMST 126 (253)
T ss_dssp EECCTTCTTCCHHHHHHHHHHHHHCTTCSEEE
T ss_pred EEEeCCcccCCHHHHHHHHHHHHhCCCCCEEE
Confidence 99999985 7889999999998765 344443
No 46
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori}
Probab=93.83 E-value=0.58 Score=36.26 Aligned_cols=102 Identities=11% Similarity=0.023 Sum_probs=62.7
Q ss_pred cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH-hCCCcEEEeeCCCCcchHHHHHHHHhhcC-CCEE
Q 026146 19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL-YGEDRILLRPRPKKLGLGTAYIHGLKHAS-GSFV 96 (242)
Q Consensus 19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~-~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-~d~i 96 (242)
+....|..+++.+.+. . . +|+|+-+.. ..+.+.+.... ++...+.++..+...|.+.+...++.... .+++
T Consensus 35 gg~pli~~~l~~l~~~-~--~-~i~vv~~~~---~~~~i~~~~~~~~~~~~~~~i~~~~~~gt~~al~~a~~~l~~~~~~ 107 (308)
T 2qh5_A 35 DHKSLFELSFKRNASL-V--D-ETLIVCNEK---HYFLALEEIKNEIKNKSVGFLLESLSKNTANAIALSALMSDKEDLL 107 (308)
T ss_dssp TTBCHHHHHHHHHHTT-C--S-EEEEEEEGG---GHHHHHHHTTTTCSSCEEEEEEESSCCCHHHHHHHHHHTSCTTSEE
T ss_pred CCCCHHHHHHHHHHcc-C--C-CEEEEEChh---HHHHHHHHHHHhhCCCccEEEeCCCCCChHHHHHHHHHHhCCCCeE
Confidence 3446667777777654 2 2 566665432 22233333332 22114556665666789999888888765 5689
Q ss_pred EEEeCCCCC-CCCChHHHHHH---HHhcCCcEEEE
Q 026146 97 VIMDADLSH-HPKYLPSFIKK---QLETGASIVTG 127 (242)
Q Consensus 97 ~~lD~D~~~-~~~~l~~l~~~---~~~~~~~~v~~ 127 (242)
+++.+|..+ +++.+.++++. +.+.+.++.++
T Consensus 108 lv~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 142 (308)
T 2qh5_A 108 IVTPSDHLIKDLQAYENAIKKAIDLAQKGFLVTFG 142 (308)
T ss_dssp EEEESSCBCCCHHHHHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEcCCccccCHHHHHHHHHHHHHHHhcCCEEEEE
Confidence 999999986 66768888875 44445555444
No 47
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli}
Probab=93.69 E-value=0.21 Score=38.54 Aligned_cols=56 Identities=21% Similarity=0.195 Sum_probs=44.1
Q ss_pred CcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeCCCCCC----CC---ChHHHHHHHHhcCC
Q 026146 67 DRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLSHH----PK---YLPSFIKKQLETGA 122 (242)
Q Consensus 67 ~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~~~----~~---~l~~l~~~~~~~~~ 122 (242)
..+.++..+...|.+.+...|+.....+.++++.+|..++ +. .+..+++.+.+.+.
T Consensus 102 ~~i~~~~~~~~~Gt~~al~~a~~~~~~~~~lv~~~D~~~~~~~~~~~~~~l~~l~~~~~~~~~ 164 (302)
T 2e3d_A 102 VTIMQVRQGLAKGLGHAVLCAHPVVGDEPVAVILPDVILDEYESDLSQDNLAEMIRRFDETGH 164 (302)
T ss_dssp CEEEEEECSSCCCHHHHHHHTHHHHCSSCEEEECTTEEECTTSSCTTTSTHHHHHHHHHHHCC
T ss_pred cceEEeeCCccCCHHHHHHHHHHHcCCCcEEEEcCCccccCccccchHHHHHHHHHHHHhcCC
Confidence 3566666666789999999998887668899999998876 45 79999988766555
No 48
>1vic_A 3-deoxy-manno-octulosonate cytidylyltransferase; structural genomics; 1.80A {Haemophilus influenzae} SCOP: c.68.1.13 PDB: 1vh3_A 3duv_A*
Probab=93.54 E-value=1.1 Score=33.58 Aligned_cols=94 Identities=10% Similarity=0.132 Sum_probs=55.8
Q ss_pred cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC--CCcchHHHHHHHHhh---cCCCE
Q 026146 21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP--KKLGLGTAYIHGLKH---ASGSF 95 (242)
Q Consensus 21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~--~~~g~~~a~n~g~~~---a~~d~ 95 (242)
...+..+++.+.+.. .-+|+|+.+. + .+.++...++ +.++..+ ...|.+ ....+++. ...++
T Consensus 27 kpli~~~l~~l~~~~---~~~ivvv~~~--~----~i~~~~~~~~---~~~~~~~~~~~~g~~-~~~~~~~~l~~~~~~~ 93 (262)
T 1vic_A 27 KPMIQHVFEKALQSG---ASRVIIATDN--E----NVADVAKSFG---AEVCMTSVNHNSGTE-RLAEVVEKLAIPDNEI 93 (262)
T ss_dssp EEHHHHHHHHHHHTT---CSEEEEEESC--H----HHHHHHHHTT---CEEEECCCSSCCHHH-HHHHHHHHTTCCTTCE
T ss_pred eEHHHHHHHHHHhCC---CceEEEECCc--H----HHHHHHHhcC---CEEEECCccccCChH-HHHHHHHHhccCCCCE
Confidence 356677888876552 2377777652 1 2334333332 4444432 233433 23333333 25699
Q ss_pred EEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146 96 VVIMDADLS-HHPKYLPSFIKKQLETGASIVTG 127 (242)
Q Consensus 96 i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~ 127 (242)
++++++|.. +++..+..+++.+.+.+.++++.
T Consensus 94 vlv~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~ 126 (262)
T 1vic_A 94 IVNIQGDEPLIPPVIVRQVADNLAKFNVNMASL 126 (262)
T ss_dssp EEECCTTCTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred EEEEeCCcCccCHHHHHHHHHHHHhcCCCEEEE
Confidence 999999985 68889999998887666665443
No 49
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ...
Probab=93.53 E-value=0.32 Score=37.49 Aligned_cols=103 Identities=13% Similarity=0.129 Sum_probs=63.8
Q ss_pred eCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH---hCCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146 16 PTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL---YGEDRILLRPRPKKLGLGTAYIHGLKHAS 92 (242)
Q Consensus 16 p~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~---~~~~~~~~~~~~~~~g~~~a~n~g~~~a~ 92 (242)
|.++. ..+...++.+... .--+|+||..+.. .+.++++... + +..+.+...+...|.+.+...|++...
T Consensus 29 pi~gk-pli~~~l~~l~~~---gi~~I~vv~~~~~---~~~i~~~l~~g~~~-g~~i~~~~~~~~~G~~~al~~a~~~i~ 100 (293)
T 1fxo_A 29 PVYDK-PMIYYPLSTLMLA---GIREILIISTPQD---TPRFQQLLGDGSNW-GLDLQYAVQPSPDGLAQAFLIGESFIG 100 (293)
T ss_dssp EETTE-ETTHHHHHHHHHT---TCCEEEEEECTTT---HHHHHHHHTTSGGG-TCEEEEEECSSCCCGGGHHHHTHHHHT
T ss_pred eECCE-eHHHHHHHHHHHC---CCCEEEEEecccc---HHHHHHHHhccccc-CceEEEeeCCCCCCHHHHHHHHHHHhC
Confidence 44443 6777788888654 2236777654322 2233443332 2 234666666667789989988888776
Q ss_pred CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146 93 GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 126 (242)
Q Consensus 93 ~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~ 126 (242)
.+.++++.+|..+....+..+++.+.+.+.++.+
T Consensus 101 ~~~~~lv~gD~~~~~~~l~~~l~~~~~~~~~~~v 134 (293)
T 1fxo_A 101 NDLSALVLGDNLYYGHDFHELLGSASQRQTGASV 134 (293)
T ss_dssp TSEEEEEETTEEEECTTHHHHHHHHHTCCSSEEE
T ss_pred CCCEEEEECChhccCccHHHHHHHHHhcCCCcEE
Confidence 5666666699876446788888887644445433
No 50
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis}
Probab=93.49 E-value=0.3 Score=37.80 Aligned_cols=101 Identities=13% Similarity=0.040 Sum_probs=62.9
Q ss_pred ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHH-HHhC-CCcEEEeeCC---------------CCcchHH
Q 026146 20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQ-QLYG-EDRILLRPRP---------------KKLGLGT 82 (242)
Q Consensus 20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~-~~~~-~~~~~~~~~~---------------~~~g~~~ 82 (242)
....|..+++.+.+. .--+|+||-+.. ..+.+++.. ...+ ...+.++..+ ...|.+.
T Consensus 32 g~pli~~~l~~~~~~---~~~~i~vv~~~~---~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gt~~ 105 (303)
T 3pnn_A 32 GDTIMDYSVYDAIRA---GFGRLVFVIRHS---FEKEFREKILTKYEGRIPVELVFQELDRLPEGFSCPEGREKPWGTNH 105 (303)
T ss_dssp SCCHHHHHHHHHHHH---TCCEEEEEECGG---GHHHHHHHTHHHHTTTSCEEEEECCTTCCCTTCCCCTTCCSCCCHHH
T ss_pred CeeHHHHHHHHHHHC---CCCeEEEEcCch---HHHHHHHHHHHHhccCCcEEEEecccccccccccccccccccCCcHH
Confidence 335667778877654 223677776532 122233322 2222 2356676655 4678999
Q ss_pred HHHHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh---cCCcEEEE
Q 026146 83 AYIHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE---TGASIVTG 127 (242)
Q Consensus 83 a~n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~---~~~~~v~~ 127 (242)
|...+..... +.++++.+|..++++.+..+++.+.+ .+.++.+.
T Consensus 106 al~~a~~~i~-~~~lV~~gD~l~~~~~~~~l~~~~~~~~~~~~~~~v~ 152 (303)
T 3pnn_A 106 AVLMGRDAIR-EPFAVINADDFYGRNGFEVLARKLMTLEGKQGEYCMV 152 (303)
T ss_dssp HHHTTTTTCC-SCEEEEESSCBCCHHHHHHHHHHHHTTTTCSSEEEEE
T ss_pred HHHHHHHhcC-CCEEEEECCeecCHHHHHHHHHHHHHhccccCceEEE
Confidence 9988888874 45667789998888788889888764 34555443
No 51
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6
Probab=93.09 E-value=0.61 Score=35.93 Aligned_cols=103 Identities=13% Similarity=0.229 Sum_probs=62.4
Q ss_pred EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH---hCCCcEEEeeCCCCcchHHHHHHHHhhc
Q 026146 15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL---YGEDRILLRPRPKKLGLGTAYIHGLKHA 91 (242)
Q Consensus 15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~---~~~~~~~~~~~~~~~g~~~a~n~g~~~a 91 (242)
+|.++ ...+...++.+... .--+|+||.... + .+.++++... + +..+.++..+...|.+.+.-.|++..
T Consensus 29 lpi~g-kpli~~~l~~l~~~---gi~~Iivv~~~~--~-~~~i~~~l~~g~~~-g~~i~~~~~~~~~G~~~al~~a~~~i 100 (295)
T 1lvw_A 29 LPIYD-KPMIYYPLSVLMLA---GIRDILIISTPR--D-LPLYRDLLGDGSQF-GVRFSYRVQEEPRGIADAFIVGKDFI 100 (295)
T ss_dssp SEETT-EETTHHHHHHHHHT---TCCEEEEEECTT--T-HHHHHHHHTTSGGG-TSEEEEEECSSCCCGGGHHHHTHHHH
T ss_pred cEECC-eeHHHHHHHHHHHC---CCCeEEEEeccc--h-HHHHHHHhhhcccc-CceEEEeeCCCCCChHHHHHHHHHHh
Confidence 34445 36778888888654 223677775422 1 2233444332 2 23466666666678888988888876
Q ss_pred CC-CEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146 92 SG-SFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 126 (242)
Q Consensus 92 ~~-d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~ 126 (242)
.. ++++++ +|..+....+.++++.+.+.+.++++
T Consensus 101 ~~~~~~lv~-gD~~~~~~~l~~~l~~~~~~~~~~~v 135 (295)
T 1lvw_A 101 GDSKVALVL-GDNVFYGHRFSEILRRAASLEDGAVI 135 (295)
T ss_dssp TTSCEEEEE-TTCCEECTTHHHHHHHHHTCCSSEEE
T ss_pred CCCcEEEEE-CCccccCcCHHHHHHHHHHcCCCcEE
Confidence 54 555555 99876446788888887554444433
No 52
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=93.05 E-value=0.16 Score=41.95 Aligned_cols=96 Identities=10% Similarity=0.062 Sum_probs=65.2
Q ss_pred cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC--CCEEEE
Q 026146 21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS--GSFVVI 98 (242)
Q Consensus 21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~--~d~i~~ 98 (242)
...+..+++.+.+. .--+|+|+-+.. .+.++++... .+.++..+...|.+.+...|++... .+++++
T Consensus 39 kpli~~~l~~l~~~---g~~~iivv~~~~----~~~i~~~~~~----~i~~v~~~~~~G~~~sl~~a~~~~~~~~~~vlv 107 (468)
T 1hm9_A 39 ISMLEHVFRSVGAI---QPEKTVTVVGHK----AELVEEVLAG----QTEFVTQSEQLGTGHAVMMTEPILEGLSGHTLV 107 (468)
T ss_dssp EEHHHHHHHHHHTT---CCSEEEEEECTT----HHHHHHSSSS----SSEEEECSSCCCHHHHHHTTHHHHTTCCSEEEE
T ss_pred ccHHHHHHHHHHhc---CCCCEEEEECCC----HHHHHHHhCC----CcEEEeCCccCChHHHHHHHHHHhccCCCeEEE
Confidence 36677788887654 123677775432 2223332111 3566666666788999888888775 689999
Q ss_pred EeCCCC-CCCCChHHHHHHHHhcCCcEEEE
Q 026146 99 MDADLS-HHPKYLPSFIKKQLETGASIVTG 127 (242)
Q Consensus 99 lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~ 127 (242)
+++|.. +.+..++.+++.+.+.+.++++.
T Consensus 108 ~~~D~P~i~~~~i~~l~~~~~~~~~~~~i~ 137 (468)
T 1hm9_A 108 IAGDTPLITGESLKNLIDFHINHKNVATIL 137 (468)
T ss_dssp EETTCTTCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred EeCCccccCHHHHHHHHHHHHhcCCcEEEE
Confidence 999986 67888999998887766666554
No 53
>2dpw_A Hypothetical protein TTHA0179; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 2.90A {Thermus thermophilus} SCOP: c.68.1.19
Probab=92.64 E-value=0.52 Score=34.79 Aligned_cols=87 Identities=15% Similarity=0.211 Sum_probs=59.9
Q ss_pred ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEE
Q 026146 20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIM 99 (242)
Q Consensus 20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~l 99 (242)
....+..+++.+.+. .. +|+|+-+. +.. +++. .+.+ ....|.+.+...|++... +.++++
T Consensus 31 g~pll~~~l~~l~~~---~~-~ivvv~~~--~~i----~~~~------~~~~---~~~~g~~~~i~~a~~~~~-~~~lv~ 90 (232)
T 2dpw_A 31 GRPMVEWVLEALYAA---GL-SPVYVGEN--PGL----VPAP------ALTL---PDRGGLLENLEQALEHVE-GRVLVA 90 (232)
T ss_dssp TEETHHHHHHHHHHT---TC-EEEEESCC--SSC----SSCC------SEEE---CCCSSHHHHHHHHHHTCC-SEEEEE
T ss_pred CEEHHHHHHHHHHhc---CC-EEEEEeCh--HHH----hhhc------CeEe---cCCCCHHHHHHHHHHHcC-CCEEEE
Confidence 446778888888655 23 78887432 221 1110 2444 445789999999998887 999999
Q ss_pred eCCCC-CCCCChHHHHHHHHhcCCcEEEEE
Q 026146 100 DADLS-HHPKYLPSFIKKQLETGASIVTGT 128 (242)
Q Consensus 100 D~D~~-~~~~~l~~l~~~~~~~~~~~v~~~ 128 (242)
++|.. +++..++.+++ . +.+.+++++.
T Consensus 91 ~~D~P~~~~~~i~~l~~-~-~~~~~~~~~~ 118 (232)
T 2dpw_A 91 TGDIPHLTEEAVRFVLD-K-APEAALVYPI 118 (232)
T ss_dssp ETTCTTCCHHHHHHHHH-H-CCSCSEEEEE
T ss_pred eCCcccCCHHHHHHHHh-c-CCCCCEEEEE
Confidence 99986 68888999888 5 4456666553
No 54
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=92.07 E-value=0.29 Score=40.10 Aligned_cols=88 Identities=10% Similarity=0.078 Sum_probs=58.7
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC-CCEEEEEe
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS-GSFVVIMD 100 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-~d~i~~lD 100 (242)
..+..+++.+.+.- --+++|+-+.. .+.++++...+ .+.++..+...|.+.+...+++... .+++++++
T Consensus 34 pli~~~l~~l~~~~---~~~iivv~~~~----~~~i~~~~~~~---~~~~v~~~~~~g~~~~~~~~~~~~~~~~~vlv~~ 103 (456)
T 2v0h_A 34 PMVKHVIDTAHQLG---SENIHLIYGHG----GDLMRTHLANE---QVNWVLQTEQLGTAHAVQQAAPFFKDNENIVVLY 103 (456)
T ss_dssp EHHHHHHHHHHHTT---CSCEEEEECTT----HHHHHHHTTTC---CCEEEECSCCCCHHHHHHHHGGGCCTTSEEEEEE
T ss_pred cHHHHHHHHHHhCC---CCcEEEEeCCC----HHHHHHHhhcC---CcEEEeCCCCCCcHHHHHHHHHhcCCCCeEEEEc
Confidence 45566777776541 22566665432 23344432221 3566666667788999999998875 79999999
Q ss_pred CCCC-CCCCChHHHHHHHHh
Q 026146 101 ADLS-HHPKYLPSFIKKQLE 119 (242)
Q Consensus 101 ~D~~-~~~~~l~~l~~~~~~ 119 (242)
+|.. +++..++.+++.+.+
T Consensus 104 ~D~P~i~~~~i~~l~~~~~~ 123 (456)
T 2v0h_A 104 GDAPLITKETLEKLIEAKPE 123 (456)
T ss_dssp TTCTTCCHHHHHHHHHHCCT
T ss_pred CCcceeCHHHHHHHHHHHhc
Confidence 9985 678888888887654
No 55
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6
Probab=92.00 E-value=0.54 Score=36.28 Aligned_cols=102 Identities=14% Similarity=0.202 Sum_probs=60.6
Q ss_pred eCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH---hCCCcEEEeeCCCCcchHHHHHHHHhhcC
Q 026146 16 PTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL---YGEDRILLRPRPKKLGLGTAYIHGLKHAS 92 (242)
Q Consensus 16 p~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~---~~~~~~~~~~~~~~~g~~~a~n~g~~~a~ 92 (242)
|.++ ...+...++.+... .--+|+||-... + .+.++++... + +..+.++..+...|.+.+.-.|++...
T Consensus 30 pi~g-kpli~~~l~~l~~~---gi~~I~vv~~~~--~-~~~i~~~l~~g~~~-g~~i~~~~~~~~~G~~~al~~a~~~i~ 101 (296)
T 1mc3_A 30 PIYD-KPMIYYPLSVLMLA---GIREILIITTPE--D-KGYFQRLLGDGSEF-GIQLEYAEQPSPDGLAQAFIIGETFLN 101 (296)
T ss_dssp EETT-EETTHHHHHHHHHT---TCCEEEEEECTT--T-HHHHHHHHTTSGGG-TCEEEEEECSSCCCSTHHHHHTHHHHT
T ss_pred EECC-eeHHHHHHHHHHhC---CCCcEEEEechh--H-HHHHHHHHhccccc-CceEEEeccCCCCCHHHHHHHHHHHhC
Confidence 3444 36777788888653 223677775422 1 2333444332 2 234666666666788889888888775
Q ss_pred C-CEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146 93 G-SFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 126 (242)
Q Consensus 93 ~-d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~ 126 (242)
. ++++++ +|..+....+..+++.+.+.+.++++
T Consensus 102 ~~~~~lv~-gD~~~~~~~l~~~l~~~~~~~~~~~v 135 (296)
T 1mc3_A 102 GEPSCLVL-GDNIFFGQGFSPKLRHVAARTEGATV 135 (296)
T ss_dssp TSCEEEEE-TTEEEECSSCHHHHHHHTTCCSSEEE
T ss_pred CCCEEEEE-CCccccccCHHHHHHHHHHcCCCCEE
Confidence 4 455555 89775446778888877544444443
No 56
>3f1c_A Putative 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; structural genomics, PSI-2, protein structure initiative; 2.30A {Listeria monocytogenes str} SCOP: c.68.1.0
Probab=91.50 E-value=1.3 Score=32.98 Aligned_cols=95 Identities=18% Similarity=0.161 Sum_probs=59.5
Q ss_pred cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC-CCcEEEeeCCCCcchHHHHHHHHhhcC-------
Q 026146 21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG-EDRILLRPRPKKLGLGTAYIHGLKHAS------- 92 (242)
Q Consensus 21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~a~n~g~~~a~------- 92 (242)
...+..+++.+.+.. ..-+|+||-+.. ..+.+++....+. ...+.++... .+...+...|++...
T Consensus 32 kpll~~~l~~~~~~~--~~~~ivvv~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~sv~~al~~l~~~~~~~~ 104 (246)
T 3f1c_A 32 KPIIVHTVEKFILNT--RFDKILISSPKE---WMNHAEDNIKKYISDDRIVVIEGG--EDRNETIMNGIRFVEKTYGLTD 104 (246)
T ss_dssp EEHHHHHHHHHHTCT--TCSEEEEEECGG---GHHHHHHHHHHHCCCTTEEEEECC--SSHHHHHHHHHHHHHHHTCCCT
T ss_pred eeHHHHHHHHHHcCC--CCCEEEEEeCHH---HHHHHHHHHHHhCCCCCEEEECCC--CchHHHHHHHHHHHhhhhcCCC
Confidence 356677777775441 123677776532 2233333333332 2246665432 356667777777653
Q ss_pred CCEEEEEeCCCC-CCCCChHHHHHHHHhcCC
Q 026146 93 GSFVVIMDADLS-HHPKYLPSFIKKQLETGA 122 (242)
Q Consensus 93 ~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~ 122 (242)
.++++++|+|.. ++++.+.++++.+.+.+.
T Consensus 105 ~~~vlv~~~d~Pli~~~~i~~li~~~~~~~a 135 (246)
T 3f1c_A 105 DDIIVTHDAVRPFLTHRIIEENIDAALETGA 135 (246)
T ss_dssp TCEEEEEETTCTTCCHHHHHHHHHHHHHTSE
T ss_pred CCEEEEecCcccCCCHHHHHHHHHHHHhcCC
Confidence 589999999975 889999999999877553
No 57
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=90.59 E-value=0.5 Score=36.88 Aligned_cols=55 Identities=20% Similarity=0.158 Sum_probs=42.4
Q ss_pred cEEEeeCCCCcchHHHHHHHHhhcCC--CEEEEEeCCCCCC-CCChHHHHHHHHhcCC
Q 026146 68 RILLRPRPKKLGLGTAYIHGLKHASG--SFVVIMDADLSHH-PKYLPSFIKKQLETGA 122 (242)
Q Consensus 68 ~~~~~~~~~~~g~~~a~n~g~~~a~~--d~i~~lD~D~~~~-~~~l~~l~~~~~~~~~ 122 (242)
.+.++..+...|.+.+...|+..... ++++++.+|..++ +..+..+++.+.+.+.
T Consensus 106 ~i~~~~~~~~~Gt~~al~~a~~~l~~~~d~~lv~~~D~~~~~~~~l~~l~~~~~~~~~ 163 (323)
T 2pa4_A 106 KAVPVTQDKPLGLGHAVGLAESVLDDDEDVVAVMLPDDLVLPTGVMERMAQVRAEFGG 163 (323)
T ss_dssp EEEEEECSSCCCHHHHHHTTGGGSCSSCCEEEEECTTEEEESSCHHHHHHHHHHTTCS
T ss_pred ceEEEeCCccCCcHHHHHHHHHHhcCCCCeEEEEeCCcccCchHHHHHHHHHHHhcCC
Confidence 46666666667999999988887643 4599999999886 5789999988876554
No 58
>2xwl_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; transferase, MEP pathway; HET: CTP; 1.49A {Mycobacterium smegmatis} PDB: 2xwm_A*
Probab=90.49 E-value=2.1 Score=31.03 Aligned_cols=87 Identities=10% Similarity=0.052 Sum_probs=57.2
Q ss_pred cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc-CCCEEEEE
Q 026146 21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA-SGSFVVIM 99 (242)
Q Consensus 21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a-~~d~i~~l 99 (242)
...+..+++.+.+... .-+|+|+-+.. ..+.++++.. ...+.++... .+.+.+...|++.. ..++++++
T Consensus 30 ~pli~~~l~~l~~~~~--~~~i~vv~~~~---~~~~~~~~~~---~~~v~~~~~~--~~~~~~i~~al~~~~~~~~vlv~ 99 (223)
T 2xwl_A 30 TPLLEHALSGLRASGV--IDRIVIAVPPA---LTDESKLVFG---GEDSVIVSGG--VDRTESVALALEAAGDAEFVLVH 99 (223)
T ss_dssp EEHHHHHHHHHHHHSC--CSEEEEEECGG---GHHHHHHHTC---BTTEEEEECC--SSHHHHHHHHHTTCTTCSEEEEC
T ss_pred eEHHHHHHHHHhcCCC--CCeEEEEEccc---HHHHHHHHhc---cCCeEEEcCC--CCHHHHHHHHHHhcCCCCEEEEE
Confidence 4566778888765421 22677776532 1222333321 1246666543 35678888999887 67999999
Q ss_pred eCCCC-CCCCChHHHHHHH
Q 026146 100 DADLS-HHPKYLPSFIKKQ 117 (242)
Q Consensus 100 D~D~~-~~~~~l~~l~~~~ 117 (242)
++|.. ++++.+..+++.+
T Consensus 100 ~~D~P~~~~~~i~~l~~~~ 118 (223)
T 2xwl_A 100 DAARALTPPALIARVVAAL 118 (223)
T ss_dssp CTTCTTCCHHHHHHHHHHH
T ss_pred cCCcccCCHHHHHHHHHHH
Confidence 99985 6888999999887
No 59
>2yc3_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran chloroplastic; transferase, non-mevalonate-pathway, herbicide, allosteric P; HET: MW5; 1.40A {Arabidopsis thaliana} PDB: 2yc5_A* 1w77_A* 2ycm_A*
Probab=90.41 E-value=1.4 Score=32.21 Aligned_cols=93 Identities=14% Similarity=0.105 Sum_probs=56.3
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC--CCEEEEE
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS--GSFVVIM 99 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~--~d~i~~l 99 (242)
..+..+++.+.+.. .--+|+|+-+.. ..++.+.+...+. ..+.++.. ..|...+...|++... .++++++
T Consensus 33 pli~~~l~~l~~~~--~~~~ivvv~~~~---~~~~~~~~~~~~~-~~v~~~~~--~~~~~~sv~~al~~~~~~~~~vl~~ 104 (228)
T 2yc3_A 33 PIALYSFFTFSRMP--EVKEIVVVCDPF---FRDIFEEYEESID-VDLSFAIP--GKERQDSVYSGLQEIDVNSELVCIH 104 (228)
T ss_dssp EHHHHHHHHHHHCT--TEEEEEEECCGG---GHHHHHTTTTTSS-SEEEEECC--CSSHHHHHHHHHTTSCTTCSEEEEE
T ss_pred EHHHHHHHHHHcCC--CCCeEEEEEChH---HHHHHHHHHHhCC-CcEEEECC--CCCHHHHHHHHHHhhccCCCEEEEe
Confidence 34455666665431 123677765422 2233333322221 24555542 3578888888988765 4899999
Q ss_pred eCCC-CCCCCChHHHHHHHHhcCC
Q 026146 100 DADL-SHHPKYLPSFIKKQLETGA 122 (242)
Q Consensus 100 D~D~-~~~~~~l~~l~~~~~~~~~ 122 (242)
|+|. .+++..++.+++.+.+.+.
T Consensus 105 d~d~P~~~~~~i~~l~~~~~~~~~ 128 (228)
T 2yc3_A 105 DSARPLVNTEDVEKVLKDGSAVGA 128 (228)
T ss_dssp ETTCTTCCHHHHHHHHHHHHHHSE
T ss_pred cCCCccCCHHHHHHHHHHHHhcCc
Confidence 9996 4788889999988765443
No 60
>1w55_A ISPD/ISPF bifunctional enzyme; biosynthetic pathway, isoprenoids, nonmevalonate, transferase; HET: C GPP; 2.3A {Campylobacter jejuni} SCOP: c.68.1.13 d.79.5.1 PDB: 1w57_A*
Probab=90.36 E-value=1.1 Score=35.86 Aligned_cols=85 Identities=9% Similarity=0.013 Sum_probs=55.4
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeC
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDA 101 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~ 101 (242)
..+..+++.+.+.. ..-+|+|+-+ . .+.++++. . .+.++. ...|...+...|++....++++++++
T Consensus 32 PLi~~~l~~l~~~~--~~~~IvVvt~-~----~~~i~~~~---~--~v~~v~--~g~g~~~sv~~aL~~l~~d~vlv~~~ 97 (371)
T 1w55_A 32 PLWLYATKNLSSFY--PFKKIVVTSS-N----ITYMKKFT---K--NYEFIE--GGDTRAESLKKALELIDSEFVMVSDV 97 (371)
T ss_dssp EHHHHHHHHHHTTS--CCSCEEEEES-C----HHHHHTTC---S--SSEEEE--CCSSHHHHHHHHHTTCCSSEEEEEET
T ss_pred EHHHHHHHHHHccC--CCCeEEEEcC-C----HHHHHHHh---C--CCEEEe--CCCChHHHHHHHHHhcCCCeEEEEeC
Confidence 45566777775421 1226777765 2 22333321 1 244443 23467788889998887899999999
Q ss_pred CCC-CCCCChHHHHHHHHhc
Q 026146 102 DLS-HHPKYLPSFIKKQLET 120 (242)
Q Consensus 102 D~~-~~~~~l~~l~~~~~~~ 120 (242)
|.. ++++.++++++.+.+.
T Consensus 98 D~Pli~~~~i~~li~~~~~~ 117 (371)
T 1w55_A 98 ARVLVSKNLFDRLIENLDKA 117 (371)
T ss_dssp TCTTCCHHHHHHHHTTGGGC
T ss_pred CcccCCHHHHHHHHHHHHhc
Confidence 985 6888899998877654
No 61
>2vsh_A TARI, 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; nucleotidyltransferase; HET: 1PE PG4 P6G; 2.00A {Streptococcus pneumoniae} PDB: 2vsi_A*
Probab=90.34 E-value=0.63 Score=34.20 Aligned_cols=96 Identities=15% Similarity=0.056 Sum_probs=57.5
Q ss_pred ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC--C-CcEEEeeCCCCcchHHHHHHHHhhc-----
Q 026146 20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG--E-DRILLRPRPKKLGLGTAYIHGLKHA----- 91 (242)
Q Consensus 20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~--~-~~~~~~~~~~~~g~~~a~n~g~~~a----- 91 (242)
....+..+++.+.+... --+|+|+-+... .+.++++...++ . ....+.. ...|...+...|++..
T Consensus 30 g~pli~~~l~~l~~~~~--~~~i~vv~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~~~l~~~~~~~~ 102 (236)
T 2vsh_A 30 DRPILIHTIEKFVLEPS--IEKIVVGVHGDW---VSHAEDLVDKYLPLYKERIIITK--GGADRNTSIKNIIEAIDAYRP 102 (236)
T ss_dssp TEEHHHHHHHHHHTCTT--CCCEEEEECGGG---HHHHHHHHHHHCGGGGGGEEEEE--CCSSHHHHHHHHHHHHHHHSC
T ss_pred CccHHHHHHHHHHcCCC--CCeEEEEeCHHH---HHHHHHHHHhccccccCceEEEC--CCCchHHHHHHHHHHHHhhcc
Confidence 34566777887765311 225677665322 133443333322 0 1223332 2246777788888766
Q ss_pred --CCCEEEEEeCCC-CCCCCChHHHHHHHHhcCC
Q 026146 92 --SGSFVVIMDADL-SHHPKYLPSFIKKQLETGA 122 (242)
Q Consensus 92 --~~d~i~~lD~D~-~~~~~~l~~l~~~~~~~~~ 122 (242)
..++++++++|. .+++..+..+++.+.+.+.
T Consensus 103 ~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~~ 136 (236)
T 2vsh_A 103 LTPEDIVVTHDSVRPFITLRMIQDNIQLAQNHDA 136 (236)
T ss_dssp CCTTCEEEEEETTCTTCCHHHHHHHHHHHHHSSE
T ss_pred CCCCCEEEEecCCcccCCHHHHHHHHHHHHhcCc
Confidence 348999999998 5788899999998876543
No 62
>2j0a_A Beta-1,3-N-acetylglucosaminyltransferase manic FR; glycosyltransferase, developmental protein, transmembrane, G apparatus, notch signaling; 1.8A {Mus musculus} PDB: 2j0b_A*
Probab=90.01 E-value=0.23 Score=38.04 Aligned_cols=109 Identities=12% Similarity=0.028 Sum_probs=61.1
Q ss_pred cCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEEEEeecCCccCchhhHHHHHhHHHHHHHHHhCCCccccccchh
Q 026146 91 ASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGTRYVRSGGVHGWNLMRKLTSRGANVLAQTLLWPGVSDLTGSFR 170 (242)
Q Consensus 91 a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 170 (242)
...+|+++.|+|+.+..+-|..++..+ ++...+.+|......... . ..... .... . .... .....|+.+
T Consensus 92 ~~~~Wf~~~DDDtyv~~~nL~~~L~~~-d~~~~~YiG~~~~~~~~~----~-~~~~~--~~~~-~-~~~~-~y~~GGaG~ 160 (280)
T 2j0a_A 92 SGLRWFCHVDDDNYVNPKALLQLLKTF-PQDRDVYVGKPSLNRPIH----A-SELQS--KQRT-K-LVRF-WFATGGAGF 160 (280)
T ss_dssp HTCSEEEEEETTEEECHHHHHHHHTTS-CTTSCCEEECEEC----------------------------C-CEECGGGCE
T ss_pred CCCcEEEEeCCCcEEcHHHHHHHHHhC-CCCCCEEEEEeccCcccc----c-cccCc--cccc-c-cccc-CcccCCCEE
Confidence 478999999999998655555555544 245667777665321100 0 00000 0000 0 0111 223345668
Q ss_pred hcchHHHHHhhhccc---------CCCcccchHHHHHHH-HcCCceEEee
Q 026146 171 LYKKSVLEDVISSCV---------SKGYVFQMEMIVRAC-RKGYHIEEVP 210 (242)
Q Consensus 171 ~~rr~~~~~~~~~~~---------~~~~~~d~~~~~~~~-~~g~~i~~~p 210 (242)
+++|++++++..... ...+.+|..+..-+. ..|.+....|
T Consensus 161 vlSr~~l~~l~~~~~~~~~~~~~~~~~~~dD~~lG~Cl~~~lGV~~~~~~ 210 (280)
T 2j0a_A 161 CINRQLALKMVPWASGSHFVDTSALIRLPDDCTVGYIIECKLGGRLQPSP 210 (280)
T ss_dssp EEEHHHHHHHHHHHTTCTTSCCTTTTTSCHHHHHHHHHHHTTCCCEEECT
T ss_pred EECHHHHHHHHHhhcccccccccccCCCCccHHHHHHHHhcCCCCceecc
Confidence 999999999854211 223456888888777 7888877665
No 63
>3rsb_A Adenosylcobinamide-phosphate guanylyltransferase; pyrophosphorylase binding motif, pyrophosphorylase; HET: GTP; 2.80A {Methanocaldococcus jannaschii}
Probab=89.86 E-value=0.091 Score=37.71 Aligned_cols=99 Identities=14% Similarity=0.152 Sum_probs=57.1
Q ss_pred ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCC-CcEEEeeCCCCcchHHHHHHHHhhcCCCEEEE
Q 026146 20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGE-DRILLRPRPKKLGLGTAYIHGLKHASGSFVVI 98 (242)
Q Consensus 20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~-~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~ 98 (242)
....+..+++.+.+.. --+|+|+-+...+...+.+.+ .++. ..+.++..+ ..|...+...|++.. .+++++
T Consensus 26 g~pli~~~l~~l~~~~---~~~v~vv~~~~~~~i~~~~~~---~~~~~~~~~~~~~~-~~g~~~si~~al~~~-~~~vlv 97 (196)
T 3rsb_A 26 GRCLIDYVVSPLLKSK---VNNIFIATSPNTPKTKEYINS---AYKDYKNIVVIDTS-GKGYIEDLNECIGYF-SEPFLV 97 (196)
T ss_dssp TEEHHHHHHHHHHSSS---CCCEEEECCTTCHHHHHHHHH---HTTTTTEEEE---------CCCCCTTTTTC-SSCEEE
T ss_pred CEEHHHHHHHHHHHCC---CCEEEEEeCCChHHHHHHHHh---hccCCCCEEEEECC-CCCcHHHHHHHHHhC-CCCEEE
Confidence 3467788888886542 226777765433222333322 1221 145555433 456666777777777 899999
Q ss_pred EeCCCC-CCCCChHHHHHHHHh-----cCCcEEE
Q 026146 99 MDADLS-HHPKYLPSFIKKQLE-----TGASIVT 126 (242)
Q Consensus 99 lD~D~~-~~~~~l~~l~~~~~~-----~~~~~v~ 126 (242)
+.+|.. +++..+.++++.+.+ .+.+.+.
T Consensus 98 ~~~D~P~i~~~~i~~l~~~~~~~~~~~~~~~~~~ 131 (196)
T 3rsb_A 98 VSSDLINLKSKIINSIVDYFYCIKAKTPDVEALA 131 (196)
T ss_dssp EETTEESCCHHHHHHHHHHHHHHHTTCC--CEEE
T ss_pred EeCCcccCCHHHHHHHHHHHHhhhcccCCCceEE
Confidence 999985 789999999999876 4455444
No 64
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=89.68 E-value=1.9 Score=34.87 Aligned_cols=99 Identities=13% Similarity=0.142 Sum_probs=59.1
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH-hCC------CcEEEeeCCC----C---cchHHHHHHH
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL-YGE------DRILLRPRPK----K---LGLGTAYIHG 87 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~-~~~------~~~~~~~~~~----~---~g~~~a~n~g 87 (242)
..+..+++.+.+. .--+|+|+-+...+ .++++... +.. ..+.++...+ . .|.+.+...|
T Consensus 45 pli~~~l~~l~~~---gi~~i~vv~~~~~~----~i~~~~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~a 117 (420)
T 3brk_X 45 RIIDFALSNALNS---GIRRIGVATQYKAH----SLIRHLQRGWDFFRPERNESFDILPASQRVSETQWYEGTADAVYQN 117 (420)
T ss_dssp ETHHHHHHHHHHT---TCCEEEEEECTTCH----HHHHHHHHHSCCCCGGGTCEEEEECCC-------CCCCHHHHHHTT
T ss_pred cHHHHHHHHHHhC---CCCeEEEEeCCChH----HHHHHHhhhhccccccccCCEEEeCccccccCCccccCCHHHHHHH
Confidence 4566777777654 22367777654322 23333222 221 1244443221 2 6888888888
Q ss_pred HhhcC---CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEE
Q 026146 88 LKHAS---GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGT 128 (242)
Q Consensus 88 ~~~a~---~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~ 128 (242)
+.... .++++++.+|.+. +..+.++++.+.+.+.++.++.
T Consensus 118 ~~~l~~~~~~~~lv~~~D~~~-~~~l~~l~~~~~~~~~~~tl~~ 160 (420)
T 3brk_X 118 IDIIEPYAPEYMVILAGDHIY-KMDYEYMLQQHVDSGADVTIGC 160 (420)
T ss_dssp HHHHHHHCCSEEEEEESSCEE-CBCTHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHhcCCCEEEEecccEEE-chHHHHHHHHHHHcCCeEEEEE
Confidence 77653 4899999999964 4558888888876666665543
No 65
>2e8b_A Probable molybdopterin-guanine dinucleotide biosy protein A; putative protein, molybdenum cofactor, structural G NPPSFA; 1.61A {Aquifex aeolicus}
Probab=89.59 E-value=1.8 Score=30.99 Aligned_cols=46 Identities=15% Similarity=0.101 Sum_probs=35.8
Q ss_pred EEEeeCC-CCcchHHHHHHHHhhcCCCEEEEEeCCCC-CCCCChHH-HH
Q 026146 69 ILLRPRP-KKLGLGTAYIHGLKHASGSFVVIMDADLS-HHPKYLPS-FI 114 (242)
Q Consensus 69 ~~~~~~~-~~~g~~~a~n~g~~~a~~d~i~~lD~D~~-~~~~~l~~-l~ 114 (242)
+.++..+ ...|.+.+...|++....++++++.+|.. ++++.++. ++
T Consensus 72 ~~~v~~~~~~~g~~~~i~~al~~~~~~~~lv~~~D~P~i~~~~i~~~l~ 120 (201)
T 2e8b_A 72 APVVLDEFEESASIIGLYTALKHAKEENVFVLSGDLPLMKKETVLYVLE 120 (201)
T ss_dssp CCEEECCCSSCCHHHHHHHHHHHCSSSEEEEEETTCTTCCHHHHHHHHH
T ss_pred ceEEecCCCCCCcHHHHHHHHHHcCCCCEEEEeCCcCcCCHHHHHHHHh
Confidence 4444433 35689999999999988899999999986 57777777 66
No 66
>3q80_A 2-C-methyl-D-erythritol 4-phosphate cytidyltransf; TB structural genomics consortium, TBSGC, rossman fold; HET: CDM; 2.00A {Mycobacterium tuberculosis} SCOP: c.68.1.0 PDB: 3q7u_A* 3okr_A 2xwn_A*
Probab=88.40 E-value=1.6 Score=32.28 Aligned_cols=94 Identities=16% Similarity=0.137 Sum_probs=59.5
Q ss_pred cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC----CCEE
Q 026146 21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS----GSFV 96 (242)
Q Consensus 21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~----~d~i 96 (242)
...+..+++.+.+.. .--+|+||-+.. ..+.++++... .+.++... .+...+.-.|++... .+++
T Consensus 35 kpll~~~l~~~~~~~--~~~~ivVv~~~~---~~~~~~~~~~~----~v~~v~gg--~~r~~sv~~gl~~~~~~~~~d~V 103 (231)
T 3q80_A 35 QTLIERAVDGLLDSG--VVDTVVVAVPAD---RTDEARQILGH----RAMIVAGG--SNRTDTVNLALTVLSGTAEPEFV 103 (231)
T ss_dssp EEHHHHHHHHHHHTS--CCCEEEEEECGG---GHHHHHHHHGG----GCEEEECC--SSHHHHHHHHHGGGC---CCSEE
T ss_pred eEHHHHHHHHHHhCC--CCCeEEEECChH---HHHHHHHHhcC----CeEEEcCC--CchHHHHHHHHHHhhhcCCCCEE
Confidence 456677788776541 123677776532 22334443322 35555422 245677888888775 4899
Q ss_pred EEEeCCCC-CCCCChHHHHHHHHhcCCcEEE
Q 026146 97 VIMDADLS-HHPKYLPSFIKKQLETGASIVT 126 (242)
Q Consensus 97 ~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~ 126 (242)
+++|+|.- ++++.++++++.+.+ +.+.++
T Consensus 104 lv~~~d~Pli~~~~i~~li~~~~~-~~~~~i 133 (231)
T 3q80_A 104 LVHDAARALTPPALVARVVEALRD-GYAAVV 133 (231)
T ss_dssp EECCTTCTTCCHHHHHHHHHHHHT-TCSEEE
T ss_pred EEEcCCcCCCCHHHHHHHHHHHhh-cCCeEE
Confidence 99999976 789999999998865 234443
No 67
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=88.07 E-value=6.6 Score=31.99 Aligned_cols=99 Identities=17% Similarity=0.046 Sum_probs=59.5
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHh--C------CCcEEEeeC--C-----CCcchHHHHHH
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLY--G------EDRILLRPR--P-----KKLGLGTAYIH 86 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~--~------~~~~~~~~~--~-----~~~g~~~a~n~ 86 (242)
..+..+++.+.+. .--+|+|+-+...+...+.+. +.+ . ...+.++.. . ...|.+.+...
T Consensus 53 pli~~~l~~l~~~---g~~~i~vv~~~~~~~i~~~~~---~~~~~~~~~~~~~~~v~i~~~~~~~~~~~~~~Gt~~al~~ 126 (451)
T 1yp2_A 53 RLIDIPVSNCLNS---NISKIYVLTQFNSASLNRHLS---RAYASNMGGYKNEGFVEVLAAQQSPENPDWFQGTADAVRQ 126 (451)
T ss_dssp ETTHHHHHHHHHT---TCCEEEEEESCCCHHHHHHHH---HHCC--------CCEEEEEESCSSTTSCCCCCSHHHHHHH
T ss_pred eeHHHHHHHHHHC---CCCEEEEEeccCHHHHHHHHh---hhhhcccccccccCcEEEecccccccccccccCcHHHHHH
Confidence 5667778887654 123677776543322222222 211 0 012344431 1 13688888888
Q ss_pred HHhhcC---CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEE
Q 026146 87 GLKHAS---GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTG 127 (242)
Q Consensus 87 g~~~a~---~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~ 127 (242)
++.... .+.++++.+|.+.+ ..+..+++.+.+.+.++.++
T Consensus 127 a~~~~~~~~~~~~lv~~~D~~~~-~~l~~l~~~~~~~~~~~tl~ 169 (451)
T 1yp2_A 127 YLWLFEEHTVLEYLILAGDHLYR-MDYEKFIQAHRETDADITVA 169 (451)
T ss_dssp THHHHTTSCCSEEEEECSCEECC-CCHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHhcCCCeEEEecCcEEEc-CCHHHHHHHHHHcCCcEEEE
Confidence 887764 58999999998654 45888988877666666443
No 68
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A*
Probab=87.66 E-value=4.1 Score=30.22 Aligned_cols=49 Identities=8% Similarity=-0.067 Sum_probs=36.5
Q ss_pred CCcchHHHHHHHHhhc-CCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEE
Q 026146 76 KKLGLGTAYIHGLKHA-SGSFVVIMDADLSHHPKYLPSFIKKQLETGASIV 125 (242)
Q Consensus 76 ~~~g~~~a~n~g~~~a-~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v 125 (242)
...|.+.+...+.... ..+.++++.+|.+ .+..+..+++.+.+.+.++.
T Consensus 104 ~~~gt~~al~~a~~~~~~~~~~lv~~~D~~-~~~~~~~~~~~~~~~~~~~t 153 (259)
T 1tzf_A 104 DSSMTGGRLKRVAEYVKDDEAFLFTYGDGV-ADLDIKATIDFHKAHGKKAT 153 (259)
T ss_dssp SSCCHHHHHHHTGGGTTTSSCEEEEETTEE-ECCCHHHHHHHHHHHCCSEE
T ss_pred cccCcHHHHHHHHHhcCCCCcEEEEECCEe-cccCHHHHHHHHHHhCCeEE
Confidence 3568888888888776 4578889999985 45678888888766555543
No 69
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae}
Probab=85.68 E-value=4.7 Score=30.15 Aligned_cols=89 Identities=11% Similarity=0.099 Sum_probs=54.0
Q ss_pred cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCc-EEEeeCCCCcchHHHHHHHHhhc------CC
Q 026146 21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDR-ILLRPRPKKLGLGTAYIHGLKHA------SG 93 (242)
Q Consensus 21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~-~~~~~~~~~~g~~~a~n~g~~~a------~~ 93 (242)
...|..+++++.+... .-+++||-....+ ..+.+++.....+... ..++..+...|.+.|...|+... ..
T Consensus 30 kpli~~~l~~l~~~~g--i~~iivv~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~av~~a~~~l~~~~~~~~ 106 (255)
T 4evw_A 30 QTLFEHSVNSFAAYFA--STPFLFIVRNVYD-TAVFVREKATQLGIKQFYIAELHTETRGQAETVTLGLEELAKQGVDYQ 106 (255)
T ss_dssp EEHHHHHHGGGGGGTT--TSCEEEEEESSTT-HHHHHHHHHHHHTCSSEEEEEESSCCSSHHHHHHHHHHHHHHTTCCCC
T ss_pred eEHHHHHHHHHhccCC--CceEEEEECchhh-hHHHHHHHHHHcCCCCceEEEeCCCCCCHHHHHHHHHHHHhhcccCCC
Confidence 3677888888765211 2255555543333 5555655444432122 23444556779999999998876 35
Q ss_pred CEEEEEeCCCCCCCCChHH
Q 026146 94 SFVVIMDADLSHHPKYLPS 112 (242)
Q Consensus 94 d~i~~lD~D~~~~~~~l~~ 112 (242)
+-++++.+|..+....+..
T Consensus 107 ~~~lV~~gD~l~~~~~~~~ 125 (255)
T 4evw_A 107 GSITVFNIDTFRPNFVFPD 125 (255)
T ss_dssp SCEEECCTTEECTTCCCCG
T ss_pred CcEEEEeCCEEEecchhHH
Confidence 6689999998775444443
No 70
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=81.71 E-value=3.3 Score=32.06 Aligned_cols=93 Identities=15% Similarity=0.115 Sum_probs=55.2
Q ss_pred ccccHHHHHHHH-HhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCC--------cc----hHHHHHH
Q 026146 20 ERLNIALIVYLI-FKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKK--------LG----LGTAYIH 86 (242)
Q Consensus 20 ~~~~l~~~l~sl-~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~--------~g----~~~a~n~ 86 (242)
-...+.-++.|+ .+.. ..++.++|++++-+++..+.++++...++ ..+.++.-+.. .+ ....+-.
T Consensus 11 Y~~~~~vli~Sl~l~~~-~~~~~f~il~~~ls~~~~~~L~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~ 88 (311)
T 1g9r_A 11 YAAYLCVAAKSVEAAHP-DTEIRFHVLDAGISEANRAAVAANLRGGG-GNIRFIDVNPEDFAGFPLNIRHISITTYARLK 88 (311)
T ss_dssp GHHHHHHHHHHHHHTCT-TSCCEEEEEESSCCHHHHHHHHHHSGGGT-TTEEEEECCGGGGTTSCCCCTTCCGGGGGGGG
T ss_pred HHHHHHHHHHHHHHHcC-CCCceEEEEECCCCHHHHHHHHHHHHHcC-CEEEEEEcCHHHHhcCccccccCCHHHHHHHH
Confidence 345556677777 5543 25678888888877777787887765543 45666542210 11 1122222
Q ss_pred HHhh-cCCCEEEEEeCCCCCCCCChHHHHH
Q 026146 87 GLKH-ASGSFVVIMDADLSHHPKYLPSFIK 115 (242)
Q Consensus 87 g~~~-a~~d~i~~lD~D~~~~~~~l~~l~~ 115 (242)
..+. ...+-+++||+|.++-.+ +.++.+
T Consensus 89 l~~ll~~~~kvlyLD~D~iv~~d-i~eL~~ 117 (311)
T 1g9r_A 89 LGEYIADCDKVLYLDIDVLVRDS-LTPLWD 117 (311)
T ss_dssp HHHHCCSCSCEEEECSSEEECSC-CHHHHT
T ss_pred HHHHhhhcCEEEEEcCCeEeccC-HHHHhc
Confidence 2222 246889999999887654 555554
No 71
>2xme_A CTP-inositol-1-phosphate cytidylyltransferase; CDP-inositol, DI-MYO-inositol phosphate; 1.89A {Archaeoglobus fulgidus} PDB: 2xmh_A*
Probab=80.54 E-value=0.68 Score=34.08 Aligned_cols=84 Identities=12% Similarity=0.113 Sum_probs=49.2
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCC-cchHHHHHHHHhhcCCCEEEEEe
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKK-LGLGTAYIHGLKHASGSFVVIMD 100 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~-~g~~~a~n~g~~~a~~d~i~~lD 100 (242)
..+..+++.+.+. --+|+|+- ... .++.+.+.+.+ +..+.++..+.. .|.+.+...|++... +.++++.
T Consensus 46 pli~~~l~~l~~~----~~~i~vv~-~~~---~~~~~~~~~~~-~~~~~~v~~~~~~~g~~~~i~~a~~~~~-~~~lv~~ 115 (232)
T 2xme_A 46 EIILRTMKLLSPH----VSEFIIVA-SRY---ADDIDAFLKDK-GFNYKIVRHDRPEKGNGYSLLVAKNHVE-DRFILTM 115 (232)
T ss_dssp EHHHHHHHHHGGG----EEEEEEEE-STT---HHHHHHHHTTS-CCCEEEEECSCGGGCHHHHHHTTGGGCC-SSEEEEE
T ss_pred EHHHHHHHHHHHh----CCEEEEEe-CCh---HHHHHHHHHhc-CCcEEEEECCCCCCCcHHHHHHHHHHCC-CCEEEEc
Confidence 4455566666443 12566665 222 23333333322 235777775543 688889999988877 4566788
Q ss_pred CCCCCCCCChHHHHH
Q 026146 101 ADLSHHPKYLPSFIK 115 (242)
Q Consensus 101 ~D~~~~~~~l~~l~~ 115 (242)
+|..++++.++.+++
T Consensus 116 ~D~p~~~~~~~~l~~ 130 (232)
T 2xme_A 116 GDHVYSQQFIEKAVR 130 (232)
T ss_dssp TTEEECHHHHHHHTT
T ss_pred CCcccCHHHHHHHHh
Confidence 997766555555543
No 72
>2i5e_A Hypothetical protein MM_2497; APC86122, methanosarcina mazei GO1, hypothetic protein, STRU genomics, PSI-2, protein structure initiative; 2.10A {Methanosarcina mazei} SCOP: c.68.1.21
Probab=80.50 E-value=5.6 Score=28.63 Aligned_cols=54 Identities=22% Similarity=0.145 Sum_probs=40.5
Q ss_pred EEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEEE
Q 026146 69 ILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGTR 129 (242)
Q Consensus 69 ~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~~ 129 (242)
+.++..+ .|.+.++..|++.. .+.++++-+|.- ++++.++.+++ .+.+.++++.
T Consensus 67 ~~~v~~~--~gl~~sl~~a~~~~-~~~vlvi~~D~P~l~~~~i~~l~~----~~~~~vv~p~ 121 (211)
T 2i5e_A 67 ARVLLDE--KDLNEALNRYLKEA-EEPVLIVMADLPLLSPEHIKEISS----TEKDVCIVPG 121 (211)
T ss_dssp SEEEECC--SCHHHHHHHHHHHC-CSCEEEECSCCTTCCHHHHHHHTT----CSSSEEEEEC
T ss_pred CEEEECC--CCHHHHHHHHHHhc-CCCEEEEcCCcCCCCHHHHHHHHc----cCCCeEEEEe
Confidence 5566655 68889999998877 688999999988 68888888776 3455665543
No 73
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=80.29 E-value=4.9 Score=31.50 Aligned_cols=19 Identities=32% Similarity=0.144 Sum_probs=14.6
Q ss_pred hcCCCEEEEEeCCCCCCCC
Q 026146 90 HASGSFVVIMDADLSHHPK 108 (242)
Q Consensus 90 ~a~~d~i~~lD~D~~~~~~ 108 (242)
....+-|++||+|.++-.+
T Consensus 92 l~~ydrvlYLDaD~lv~~d 110 (333)
T 1ll2_A 92 LTQYSKCVFMDADTLVLAN 110 (333)
T ss_dssp CTTCSEEEEECTTEEECSC
T ss_pred hcCCCeEEEEeCCEEeccC
Confidence 3457899999999886544
No 74
>2gak_A Beta-1,6-N-acetylglucosaminyltransferase; glycoprotein, CIS-peptide, dimer; HET: NAG; 2.00A {Mus musculus} PDB: 2gam_A* 3otk_A*
Probab=76.63 E-value=15 Score=29.41 Aligned_cols=103 Identities=9% Similarity=-0.022 Sum_probs=54.9
Q ss_pred CCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEE-EEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCC--CCcc---hH
Q 026146 8 KNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEI-IVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRP--KKLG---LG 81 (242)
Q Consensus 8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~ei-ivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~--~~~g---~~ 81 (242)
+++++.+|.+++..+.++++++.+ +.+...+ |-+|-.+++...+.+..+...++ ++.++... -..| .-
T Consensus 83 ~~kiAflil~h~d~~~l~rll~~l----y~p~n~y~IHvD~ks~~~~~~~~~~~~~~f~--NV~v~~~~~~v~WGg~S~v 156 (391)
T 2gak_A 83 GFPIAYSIVVHHKIEMLDRLLRAI----YMPQNFYCIHVDRKAEESFLAAVQGIASCFD--NVFVASQLESVVYASWTRV 156 (391)
T ss_dssp TSCEEEEEEECSCHHHHHHHHHHH----CCTTSEEEEEECTTSCHHHHHHHHHHHHTCT--TEEECSSCCCCCTTSHHHH
T ss_pred CCCEEEEEEecCCHHHHHHHHHHH----hCCCCeEEEEEeCCCCHHHHHHHHHHHhcCC--CEEEeccCcccccCCchHH
Confidence 368999999998776666666555 3333344 44454444433444444444444 78876422 2233 22
Q ss_pred HHHHHHHhhc-----CCCEEEEEeCCCCC--CCCChHHHHHH
Q 026146 82 TAYIHGLKHA-----SGSFVVIMDADLSH--HPKYLPSFIKK 116 (242)
Q Consensus 82 ~a~n~g~~~a-----~~d~i~~lD~D~~~--~~~~l~~l~~~ 116 (242)
.|--.+++.+ .-+|++.|-+.+.+ +.+.+...+..
T Consensus 157 ~A~l~ll~~aL~~~~~w~yfilLSgsD~PLkt~~~i~~~l~~ 198 (391)
T 2gak_A 157 KADLNCMKDLYRMNANWKYLINLCGMDFPIKTNLEIVRKLKC 198 (391)
T ss_dssp HHHHHHHHHHHHHCSCCCEEEEEETTCEESSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEecCCCccccCHHHHHHHHHh
Confidence 3333333332 46898888777663 23334444433
No 75
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=74.85 E-value=7.1 Score=29.43 Aligned_cols=17 Identities=35% Similarity=0.186 Sum_probs=13.8
Q ss_pred CCCEEEEEeCCCCCCCC
Q 026146 92 SGSFVVIMDADLSHHPK 108 (242)
Q Consensus 92 ~~d~i~~lD~D~~~~~~ 108 (242)
..|-|++||+|..+-.+
T Consensus 95 ~~~~vlylD~D~~v~~~ 111 (263)
T 3u2u_A 95 QYSKCVFMDADTLVLAN 111 (263)
T ss_dssp TCSEEEEECTTEEECSC
T ss_pred CcceEEEEcCCEeeccC
Confidence 47889999999886544
No 76
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A*
Probab=72.22 E-value=11 Score=29.49 Aligned_cols=106 Identities=16% Similarity=0.121 Sum_probs=57.0
Q ss_pred EeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC-C
Q 026146 15 IPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS-G 93 (242)
Q Consensus 15 ip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~-~ 93 (242)
+|..++...|..+++.+..... .-+++|+-+.. ....+.+.....+ ...++..+...|.+.+.-.+..... .
T Consensus 28 l~l~g~~pli~~~l~~l~~~~~--~~~iivvt~~~---~~~~i~~~l~~~~--~~~ii~e~~~~gta~ai~~a~~~~~~~ 100 (336)
T 2x65_A 28 LKLFGNKSLMRWTFERVLEEMD--PKDVIVVTHKD---YVERTKKELPELP--DENIIAEPMKKNTAPACFIGTKLADDD 100 (336)
T ss_dssp CCCBTTBCHHHHHHHHHHTTCC--GGGEEEEEEGG---GHHHHHHHCTTSC--GGGEEEESSCCCHHHHHHHHHTTSCTT
T ss_pred EECCCCCcHHHHHHHHHhccCC--CCcEEEEcChH---HHHHHHHHhhccc--cceEEeCCCCCCcHHHHHHHHHhhCCC
Confidence 3444546778888888865411 12456655421 1233333322211 1223444455687778777776543 5
Q ss_pred CEEEEEeCCCCCC-CCChHHHHH----HHHhcCCcEEEE
Q 026146 94 SFVVIMDADLSHH-PKYLPSFIK----KQLETGASIVTG 127 (242)
Q Consensus 94 d~i~~lD~D~~~~-~~~l~~l~~----~~~~~~~~~v~~ 127 (242)
++++++.+|..+. ++.+..+++ ..++.+..+.+|
T Consensus 101 ~~~lvl~~D~~~~~~~~~~~~l~~~~~~~~~~~~~vt~~ 139 (336)
T 2x65_A 101 EPVLVLPADHRIPDTKKFWKTVKKALDALEKYDGLFTFG 139 (336)
T ss_dssp CEEEEEETTCBCCCHHHHHHHHHHHHHHHHHHCSEEEEE
T ss_pred CEEEEEcCCceeccHHHHHHHHHHHHHHHHhcCCeEEEE
Confidence 7899999998864 344444443 343434444444
No 77
>3cgx_A Putative nucleotide-diphospho-sugar transferase; YP_389115.1, joint center for structural genomics; 1.90A {Desulfovibrio desulfuricans subsp}
Probab=68.83 E-value=32 Score=25.36 Aligned_cols=57 Identities=18% Similarity=0.268 Sum_probs=43.2
Q ss_pred EEEeeCCCCcchHHHHHHHHhhc---CCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcEEEEE
Q 026146 69 ILLRPRPKKLGLGTAYIHGLKHA---SGSFVVIMDADLS-HHPKYLPSFIKKQLETGASIVTGT 128 (242)
Q Consensus 69 ~~~~~~~~~~g~~~a~n~g~~~a---~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~v~~~ 128 (242)
+.+... ...|.+..+..|++.+ ..+-++++-+|.- +++..+..+++.+.+ .++|+|+
T Consensus 77 ~~~~~q-~~~gLg~rl~~a~~~~~~~~~~~vliigaD~P~L~~~~l~~a~~~l~~--~d~VigP 137 (242)
T 3cgx_A 77 HMFAAQ-QGLDLGERMKHAMQKAFDDGYDRVVLMGSDIPDYPCELVQKALNDLQH--YDAAIGP 137 (242)
T ss_dssp SEEEEC-CSSSHHHHHHHHHHHHHHTTCSEEEEECSSCTTCCHHHHHHHHHHTTT--CSEEEEE
T ss_pred cEEecC-CCCCHHHHHHHHHHHHHhCCCCeEEEEcCCCCCCCHHHHHHHHHHhcc--CCeEEEE
Confidence 444443 3458999999999876 3578999999988 889999999887754 5677764
No 78
>2px7_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TTHA0171, ISPD_THET8, ISPD, structural genomics PSI; 2.20A {Thermus thermophilus HB8}
Probab=68.34 E-value=5.6 Score=29.20 Aligned_cols=51 Identities=12% Similarity=0.090 Sum_probs=39.5
Q ss_pred EEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeCCCC-CCCCChHHHHHHHHhcC
Q 026146 69 ILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLS-HHPKYLPSFIKKQLETG 121 (242)
Q Consensus 69 ~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~ 121 (242)
+.++.. ..|...+...|++....++++++++|.. ++++.+..+++.+.+.+
T Consensus 84 v~~~~~--~~~~~~~i~~al~~~~~~~vlv~~~D~P~~~~~~i~~l~~~~~~~~ 135 (236)
T 2px7_A 84 AVFLEG--GATRQASVARLLEAASLPLVLVHDVARPFVSRGLVARVLEAAQRSG 135 (236)
T ss_dssp CEEEEC--CSSHHHHHHHHHHHCCSSEEEECCTTCCCCCHHHHHHHHHHHHHHS
T ss_pred cEEEeC--CCchHHHHHHHHHHcCCCeEEEecCccccCCHHHHHHHHHHHHhcC
Confidence 455542 3467888888898887899999999975 78889999998876544
No 79
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A*
Probab=63.49 E-value=13 Score=27.62 Aligned_cols=81 Identities=12% Similarity=0.038 Sum_probs=45.4
Q ss_pred ccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC--CcchHHHHHHHHhhcCCCEEEEE
Q 026146 22 LNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK--KLGLGTAYIHGLKHASGSFVVIM 99 (242)
Q Consensus 22 ~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~--~~g~~~a~n~g~~~a~~d~i~~l 99 (242)
..+..+++.+.+. . .-+|+|+-+...+...+.+ +.++ +.++..++ ..|.+.+...+++... + ++++
T Consensus 57 pli~~~l~~l~~~-g--~~~i~vv~~~~~~~i~~~~----~~~~---~~iv~~~~~~~~g~~~al~~a~~~~~-~-~lv~ 124 (254)
T 1jyk_A 57 PLIEYQIEFLKEK-G--INDIIIIVGYLKEQFDYLK----EKYG---VRLVFNDKYADYNNFYSLYLVKEELA-N-SYVI 124 (254)
T ss_dssp EHHHHHHHHHHHT-T--CCCEEEEECTTGGGGTHHH----HHHC---CEEEECTTTTTSCTHHHHHTTGGGCT-T-EEEE
T ss_pred EHHHHHHHHHHHC-C--CCeEEEEeCCcHHHHHHHH----HhCC---cEEEECCCccCCCcHHHHHHHHHHCC-C-EEEE
Confidence 4556677777654 1 2256666553333332222 2332 45555443 3577777777776653 4 6789
Q ss_pred eCCCCCCCCChHHHH
Q 026146 100 DADLSHHPKYLPSFI 114 (242)
Q Consensus 100 D~D~~~~~~~l~~l~ 114 (242)
.+|..+..+.+..++
T Consensus 125 ~~D~~~~~~~~~~~~ 139 (254)
T 1jyk_A 125 DADNYLFKNMFRNDL 139 (254)
T ss_dssp ETTEEESSCCCCSCC
T ss_pred eCCcccCHHHHHHHH
Confidence 999886556655543
No 80
>1vpa_A 2-C-methyl-D-erythritol 4-phosphate cytidylyltran; TM1393, JCSG, joint center for structural GENO PSI, protein structure initiative; HET: CTP; 2.67A {Thermotoga maritima} SCOP: c.68.1.13
Probab=60.13 E-value=12 Score=27.21 Aligned_cols=92 Identities=16% Similarity=0.124 Sum_probs=54.0
Q ss_pred cccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhc---CCCEEE
Q 026146 21 RLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHA---SGSFVV 97 (242)
Q Consensus 21 ~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a---~~d~i~ 97 (242)
...+..+++.+.+.. .--+|+|+-+.. ..+.++++.. +. ..+.... ...+...+...|++.+ ..++++
T Consensus 41 kpli~~~i~~l~~~~--~~~~ivVv~~~~---~~~~~~~~~~-~~-~~~~~~~--gg~~~~~sv~~al~~~~~~~~~~vl 111 (234)
T 1vpa_A 41 RMLFEYPLSTFLKSE--AIDGVVIVTRRE---WFEVVEKRVF-HE-KVLGIVE--GGDTRSQSVRSALEFLEKFSPSYVL 111 (234)
T ss_dssp EETTHHHHHHHHHCT--TCSEEEEEECGG---GHHHHHTTCC-CT-TEEEEEE--CCSSHHHHHHHHHHHHGGGCCSEEE
T ss_pred eEHHHHHHHHHHcCC--CCCeEEEEEChH---HHHHHHHHhc-cC-CceEEeC--CCCcHHHHHHHHHHHhhhcCCCEEE
Confidence 456777888886542 123777776532 1222233211 11 1232221 1123556677777765 368999
Q ss_pred EEeCCCC-CCCCChHHHHHHHHhcC
Q 026146 98 IMDADLS-HHPKYLPSFIKKQLETG 121 (242)
Q Consensus 98 ~lD~D~~-~~~~~l~~l~~~~~~~~ 121 (242)
++++|.. ++++.+..+++.+.+.+
T Consensus 112 v~~~D~Pli~~~~i~~l~~~~~~~~ 136 (234)
T 1vpa_A 112 VHDSARPFLRKKHVSEVLRRARETG 136 (234)
T ss_dssp EEETTSCCCCHHHHHHHHHHHHHHS
T ss_pred EecCcccCCCHHHHHHHHHHHHhcC
Confidence 9999985 78889999998876544
No 81
>2icy_A Probable UTP-glucose-1-phosphate uridylyltransferase 2; AT3G03250, UDP, putative UDP-glucose pyrophosphorylase; HET: UPG U5P; 1.64A {Arabidopsis thaliana} SCOP: b.81.1.4 c.68.1.5 PDB: 2icx_A* 1z90_A 2q4j_A
Probab=51.45 E-value=1e+02 Score=25.40 Aligned_cols=106 Identities=13% Similarity=0.130 Sum_probs=58.4
Q ss_pred cccccHHHHHHHHHhhhc--CCCeEEEEEeCCCCCChHHHHHHHHHHhC--CCcEEEeeC--------------------
Q 026146 19 NERLNIALIVYLIFKHLR--DVDFEIIVVDDGSPDGTQEVVKQLQQLYG--EDRILLRPR-------------------- 74 (242)
Q Consensus 19 n~~~~l~~~l~sl~~~~~--~~~~eiivvd~~s~d~t~~~l~~~~~~~~--~~~~~~~~~-------------------- 74 (242)
+....++-.++.+.+... ...+.++++.... |.+.++++.+++. +.++.++..
T Consensus 106 ~gkp~Le~~i~~l~~~~~~~G~~ip~vimts~~---t~e~t~~~f~~~~~fG~~I~~f~Q~~~P~i~~e~~~~l~~~~~~ 182 (469)
T 2icy_A 106 DGLTFLDLIVIQIENLNNKYGCKVPLVLMNSFN---THDDTHKIVEKYTNSNVDIHTFNQSKYPRVVADEFVPWPSKGKT 182 (469)
T ss_dssp TTEEHHHHHHHHHHHHHHHHSCCCCEEEEECTT---THHHHHHHHGGGTTSSSCEEEEECCCEECEETTTTEEGGGGTCC
T ss_pred CCCCHHHHHHHHHHHHHHhcCCCccEEEEeCCC---CHHHHHHHHHhcccCCceEEEEEecceeeEccccCccccCCCCC
Confidence 455667777777765421 1235677776654 3444444443322 235665422
Q ss_pred ----CCCcchHHHHHHH-----Hhh--cC-CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEE
Q 026146 75 ----PKKLGLGTAYIHG-----LKH--AS-GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGT 128 (242)
Q Consensus 75 ----~~~~g~~~a~n~g-----~~~--a~-~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~ 128 (242)
....|.++++... ++. .+ .+|++++..|........ .++....+.+.++....
T Consensus 183 ~~~e~~P~GtGG~~~~L~~sGll~~l~~~G~e~~~V~n~DnL~~~~d~-~ll~~~~~~~a~~t~~v 247 (469)
T 2icy_A 183 DKEGWYPPGHGDVFPALMNSGKLDTFLSQGKEYVFVANSDNLGAIVDL-TILKHLIQNKNEYCMEV 247 (469)
T ss_dssp SGGGEECCCGGGHHHHHHHHSHHHHHHTTTCCEEEEEETTBTTCCCCH-HHHHHHHHHTCSEEEEE
T ss_pred ccccCCcCCchHHHHHHHhcCcHHHHHhcCCCEEEEEECCcCCcccCH-HHHHHHHHcCCCeeEEE
Confidence 1345666665432 222 22 599999999996543333 56666666666665543
No 82
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=47.44 E-value=11 Score=30.03 Aligned_cols=82 Identities=17% Similarity=0.100 Sum_probs=47.6
Q ss_pred ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC-CcchHHHHHHHHhhcCCCEEEE
Q 026146 20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK-KLGLGTAYIHGLKHASGSFVVI 98 (242)
Q Consensus 20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~-~~g~~~a~n~g~~~a~~d~i~~ 98 (242)
....+..+++.+.+.- --+++|+-+.. . +++..... ..+.++..+. ..|.+.++..+.+ .+.+++
T Consensus 30 g~pli~~~l~~l~~~~---~~~i~vv~~~~---i----~~~~~~~~-~~i~~~~~~~~~~g~~~~l~~~~~---~~~~lv 95 (401)
T 2ggo_A 30 SKPLIEYQIEYLRKCG---IRDITVIVSSK---N----KEYFEKKL-KEISIVTQKDDIKGTGAAILSAKF---NDEALI 95 (401)
T ss_dssp TEEHHHHHHHHHHHTT---CCEEEEEECGG---G----HHHHHHHC-TTCEEEECCTTCCBSTTTGGGCCC---SSEEEE
T ss_pred CEeHHHHHHHHHHHCC---CCEEEEEeCHH---H----HHHhhccC-CcEEEEeCCCCCCChHHHHHHhcc---CCCEEE
Confidence 3467888888886652 23677775532 2 23322221 1466666554 4566554443333 688999
Q ss_pred EeCCCCCC-CCChHHHHH
Q 026146 99 MDADLSHH-PKYLPSFIK 115 (242)
Q Consensus 99 lD~D~~~~-~~~l~~l~~ 115 (242)
+.+|..+. +..++.+++
T Consensus 96 ~~~D~~~~~~~~~~~l~~ 113 (401)
T 2ggo_A 96 IYGDLFFSNEKEICNIIT 113 (401)
T ss_dssp EETTEEESCSHHHHHHTT
T ss_pred EeCccccccHHHHHHHHH
Confidence 99998754 555555554
No 83
>4b4t_W RPN10, 26S proteasome regulatory subunit RPN10; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=40.76 E-value=81 Score=23.75 Aligned_cols=48 Identities=17% Similarity=0.133 Sum_probs=35.4
Q ss_pred CcchHHHHHHHHhhcC--------CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcE
Q 026146 77 KLGLGTAYIHGLKHAS--------GSFVVIMDADLSHHPKYLPSFIKKQLETGASI 124 (242)
Q Consensus 77 ~~g~~~a~n~g~~~a~--------~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~ 124 (242)
....+.++..|+..++ ..+|+|+|+|...+++.+.++.+.+.+.++.+
T Consensus 84 ~T~l~~gL~~A~~aLk~~~~k~~~~rIIlf~ds~~~~~~~~l~~lak~lkk~gI~v 139 (268)
T 4b4t_W 84 KLHMATALQIAQLTLKHRQNKVQHQRIVAFVCSPISDSRDELIRLAKTLKKNNVAV 139 (268)
T ss_dssp CCCHHHHHHHHHHHHHTCSCTTSEEEEEEEECSCCSSCHHHHHHHHHHHHHHTEEE
T ss_pred CCChHHHHHHHHHHHHhcccCCCceEEEEEECCCCCCCHHHHHHHHHHHHHcCCEE
Confidence 3446777777776552 25799999998888888999998887766543
No 84
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=40.21 E-value=94 Score=21.80 Aligned_cols=54 Identities=13% Similarity=0.138 Sum_probs=38.7
Q ss_pred CCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhC
Q 026146 7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYG 65 (242)
Q Consensus 7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~ 65 (242)
.+|.|.||+=.-...+..+++.+.|.+. . -.+|+-|+ |.-.|.+.+.++.+...
T Consensus 21 mkp~V~IimGS~SD~~v~~~a~~~L~~~-g-I~~e~~V~---SAHRtp~~l~~~~~~a~ 74 (181)
T 4b4k_A 21 MKSLVGVIMGSTSDWETMKYACDILDEL-N-IPYEKKVV---SAHRTPDYMFEYAETAR 74 (181)
T ss_dssp -CCSEEEEESSGGGHHHHHHHHHHHHHT-T-CCEEEEEC---CTTTSHHHHHHHHHHTT
T ss_pred CCccEEEEECCHhHHHHHHHHHHHHHHc-C-CCeeEEEE---ccccChHHHHHHHHHHH
Confidence 3567899988887777788888777543 2 46888887 55677777777776543
No 85
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=38.13 E-value=41 Score=20.00 Aligned_cols=45 Identities=13% Similarity=0.034 Sum_probs=28.3
Q ss_pred HHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeC
Q 026146 25 ALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPR 74 (242)
Q Consensus 25 ~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~ 74 (242)
.+++..+.+ ....++|+.+..++++...+..++..+. .++.++..
T Consensus 17 ~~v~kai~~----gkaklViiA~D~~~~~~~~i~~lc~~~~-Ip~~~v~s 61 (82)
T 3v7e_A 17 KQTVKALKR----GSVKEVVVAKDADPILTSSVVSLAEDQG-ISVSMVES 61 (82)
T ss_dssp HHHHHHHTT----TCEEEEEEETTSCHHHHHHHHHHHHHHT-CCEEEESC
T ss_pred HHHHHHHHc----CCeeEEEEeCCCCHHHHHHHHHHHHHcC-CCEEEECC
Confidence 445555543 3457777777666678888888887765 34555443
No 86
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=37.96 E-value=1.1e+02 Score=21.97 Aligned_cols=95 Identities=12% Similarity=0.074 Sum_probs=47.9
Q ss_pred cEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEE-eCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcch---HHHHH
Q 026146 10 KYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVV-DDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGL---GTAYI 85 (242)
Q Consensus 10 ~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivv-d~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~---~~a~n 85 (242)
+.-|.|-+-....+++.+++.+.+.. .+.+|..| .|..+-...+. +++++ ..+.++....-..+ ....-
T Consensus 7 ~~ri~vl~SG~gsnl~all~~~~~~~--l~~~I~~Visn~~~a~~l~~----A~~~g-Ip~~~~~~~~~~~r~~~d~~~~ 79 (209)
T 4ds3_A 7 RNRVVIFISGGGSNMEALIRAAQAPG--FPAEIVAVFSDKAEAGGLAK----AEAAG-IATQVFKRKDFASKEAHEDAIL 79 (209)
T ss_dssp CEEEEEEESSCCHHHHHHHHHHTSTT--CSEEEEEEEESCTTCTHHHH----HHHTT-CCEEECCGGGSSSHHHHHHHHH
T ss_pred CccEEEEEECCcHHHHHHHHHHHcCC--CCcEEEEEEECCcccHHHHH----HHHcC-CCEEEeCccccCCHHHHHHHHH
Confidence 34455555566778888888875432 23565544 33332233333 33332 34444432211111 23444
Q ss_pred HHHhhcCCCEEEEEeCCCCCCCCChH
Q 026146 86 HGLKHASGSFVVIMDADLSHHPKYLP 111 (242)
Q Consensus 86 ~g~~~a~~d~i~~lD~D~~~~~~~l~ 111 (242)
..++..+.|++++..---++++.+++
T Consensus 80 ~~l~~~~~Dliv~agy~~il~~~~l~ 105 (209)
T 4ds3_A 80 AALDVLKPDIICLAGYMRLLSGRFIA 105 (209)
T ss_dssp HHHHHHCCSEEEESSCCSCCCHHHHG
T ss_pred HHHHhcCCCEEEEeccccCcCHHHHh
Confidence 55666677888777655555554443
No 87
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=37.13 E-value=61 Score=24.26 Aligned_cols=72 Identities=13% Similarity=0.101 Sum_probs=39.0
Q ss_pred EEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeCCC-CCCCCChHHHHHHHHh
Q 026146 41 EIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADL-SHHPKYLPSFIKKQLE 119 (242)
Q Consensus 41 eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~-~~~~~~l~~l~~~~~~ 119 (242)
++++|++.........+.+..+..+ ..+.++....-.. ..-+..+.|.|++.|... .++++.++.+.+..++
T Consensus 6 ~vLiV~g~~~~~~a~~l~~aL~~~g-~~V~~i~~~~~~~------~~~~L~~yDvIIl~d~~~~~l~~~~~~~L~~yV~~ 78 (259)
T 3rht_A 6 RVLYCGDTSLETAAGYLAGLMTSWQ-WEFDYIPSHVGLD------VGELLAKQDLVILSDYPAERMTAQAIDQLVTMVKA 78 (259)
T ss_dssp CEEEEESSCTTTTHHHHHHHHHHTT-CCCEEECTTSCBC------SSHHHHTCSEEEEESCCGGGBCHHHHHHHHHHHHT
T ss_pred eEEEECCCCchhHHHHHHHHHHhCC-ceEEEeccccccc------ChhHHhcCCEEEEcCCccccCCHHHHHHHHHHHHh
Confidence 4677754333344454554444332 4677766543211 112445778888887654 3566666666666654
No 88
>4fak_A Ribosomal RNA large subunit methyltransferase H; alpha/beta methyltransferase rossmann fold, rRNA methylation rRNA, ribosomal protein; HET: SAM PG4; 1.70A {Staphylococcus aureus} PDB: 1vh0_A
Probab=37.12 E-value=1e+02 Score=21.25 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=57.5
Q ss_pred CCCcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCCh--HHHHHHHHHHhCCCcEEEeeCCCCcchHHH
Q 026146 7 NKNKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGT--QEVVKQLQQLYGEDRILLRPRPKKLGLGTA 83 (242)
Q Consensus 7 ~~~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t--~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a 83 (242)
++|+|.|+.+-...+..+.+.++...+.... ..++++.|.|....+. ....++..+.. +
T Consensus 3 ~~Mki~ii~VGk~k~~~~~~~i~eY~kRl~~~~~~ei~ei~~~k~~~~~s~~~~~~~~~~E------------------g 64 (163)
T 4fak_A 3 EFMKITILAVGKLKEKYWKQAIAEYEKRLGPYTKIDIIEVPDEKAPENMSDKEIEQVKEKE------------------G 64 (163)
T ss_dssp SCCEEEEEEESCCCCHHHHHHHHHHHHHHTTTCEEEEEEECCCCCCTTCCHHHHHHHHHHH------------------H
T ss_pred cccEEEEEEecCcCcHHHHHHHHHHHHHccCcCCeEEEEecccccccccchhhHHHHHHHH------------------H
Confidence 4578999988888778887777776666544 5788888887653321 11111111000 0
Q ss_pred HHHHHhh-cCCCEEEEEeCCCC-CCCCChHHHHHHHHhcC
Q 026146 84 YIHGLKH-ASGSFVVIMDADLS-HHPKYLPSFIKKQLETG 121 (242)
Q Consensus 84 ~n~g~~~-a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~ 121 (242)
- .-++. ..+++++.||-+.. ++..-+.+.++.....+
T Consensus 65 ~-~il~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~g 103 (163)
T 4fak_A 65 Q-RILAKIKPQSTVITLEIQGKMLSSEGLAQELNQRMTQG 103 (163)
T ss_dssp H-HHHHTCCTTSEEEEEEEEEEECCHHHHHHHHHHHHHTT
T ss_pred H-HHHHhCCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcC
Confidence 0 01122 24689999998876 66666777776665443
No 89
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=36.97 E-value=73 Score=19.61 Aligned_cols=53 Identities=13% Similarity=0.129 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcE-EEeeCCCCcchH
Q 026146 24 IALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRI-LLRPRPKKLGLG 81 (242)
Q Consensus 24 l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~-~~~~~~~~~g~~ 81 (242)
..+++..+.+. ...++|+...+++++...+..++..+. .++ .+.......|.+
T Consensus 20 ~~~v~kai~~g----ka~lViiA~D~~~~~~~~i~~~c~~~~-ip~~~~~~s~~eLG~a 73 (99)
T 3j21_Z 20 SNETIRLAKTG----GAKLIIVAKNAPKEIKDDIYYYAKLSD-IPVYEFEGTSVELGTL 73 (99)
T ss_dssp HHHHHHHHHHT----CCSEEEEECCCCHHHHHHHHHHHHHTT-CCEEEECCCSCGGGGT
T ss_pred HHHHHHHHHcC----CccEEEEeCCCCHHHHHHHHHHHHHcC-CCEEEeCCCHHHHHHH
Confidence 35566667554 224455544466677777888777764 344 443555555644
No 90
>2ale_A SNU13, NHP2/L7AE family protein YEL026W; splicing, RNA, yeast, His-TAG, RNA binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: d.79.3.1 PDB: 1zwz_A 2ozb_A 3siu_A 3siv_A 1e7k_A
Probab=36.77 E-value=64 Score=21.36 Aligned_cols=79 Identities=14% Similarity=0.024 Sum_probs=41.9
Q ss_pred HHHHHHHHhhhcCCCeEEEEEeCCCCC-ChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeCCC
Q 026146 25 ALIVYLIFKHLRDVDFEIIVVDDGSPD-GTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADL 103 (242)
Q Consensus 25 ~~~l~sl~~~~~~~~~eiivvd~~s~d-~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~ 103 (242)
.+++..+.+. ...++|+....++ ++...+..++..++ ..+.++......|. -.|.+. ..-.+.++|.|.
T Consensus 38 ~~v~kai~~g----kakLViiA~D~~p~~~~~~l~~lc~~~~-VP~~~v~sk~eLG~----a~G~~~-~~s~vaI~d~~~ 107 (134)
T 2ale_A 38 NEATKTLNRG----ISEFIIMAADCEPIEILLHLPLLCEDKN-VPYVFVPSRVALGR----ACGVSR-PVIAASITTNDA 107 (134)
T ss_dssp HHHHHHHHHT----CEEEEEEETTCSSGGGGTHHHHHHHHHT-CCEEEESCHHHHHH----HTTCSS-CCSEEEEECCTT
T ss_pred hHHHHHHHhC----CCeEEEEeCCCCHHHHHHHHHHHHHhcC-CCEEEECCHHHHHH----HhCCCC-CeEEEEEEcCCh
Confidence 3445555433 4567777666666 47888888887765 34554432222222 222222 234677888664
Q ss_pred CCCCCChHHHHHHH
Q 026146 104 SHHPKYLPSFIKKQ 117 (242)
Q Consensus 104 ~~~~~~l~~l~~~~ 117 (242)
. .+..+++.+
T Consensus 108 s----~~~~l~~~i 117 (134)
T 2ale_A 108 S----AIKTQIYAV 117 (134)
T ss_dssp C----TTHHHHHHH
T ss_pred H----HHHHHHHHH
Confidence 2 244444444
No 91
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=34.26 E-value=1.1e+02 Score=21.00 Aligned_cols=92 Identities=20% Similarity=0.178 Sum_probs=53.9
Q ss_pred CcEEEEEeCccccccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHH
Q 026146 9 NKYSIIIPTYNERLNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHG 87 (242)
Q Consensus 9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g 87 (242)
++|.|+.+-... ..+.+.++...+.... -.++++.|-+... .+.+...+.... .+
T Consensus 3 Mki~IiaVGk~k-~~~~~~i~eY~kRl~~~~~lei~ev~~~k~-~~~~~~~~~E~~-------------------~i--- 58 (163)
T 1o6d_A 3 LRVRIAVIGKLD-GFIKEGIKHYEKFLRRFCKPEVLEIKRVHR-GSIEEIVRKETE-------------------DL--- 58 (163)
T ss_dssp CEEEEEEESCCC-HHHHHHHHHHHHHHTTTCEEEEEEECCCCC-SCHHHHHHHHHH-------------------HH---
T ss_pred cEEEEEEecCcc-HHHHHHHHHHHHHcCccCCceEEEecCccc-ccHHHHHHHHHH-------------------HH---
Confidence 468888888777 7777777776666554 5678888877554 222222111000 00
Q ss_pred Hhh-cCCCEEEEEeCCCC-CCCCChHHHHHHHHhcCCcE
Q 026146 88 LKH-ASGSFVVIMDADLS-HHPKYLPSFIKKQLETGASI 124 (242)
Q Consensus 88 ~~~-a~~d~i~~lD~D~~-~~~~~l~~l~~~~~~~~~~~ 124 (242)
++. ..++|++.||-... ++..-+.+.++.....+.++
T Consensus 59 l~~i~~~~~vI~LD~~Gk~~sS~~fA~~l~~~~~~G~~i 97 (163)
T 1o6d_A 59 TNRILPGSFVMVMDKRGEEVSSEEFADFLKDLEMKGKDI 97 (163)
T ss_dssp HTTCCTTCEEEEEEEEEEECCHHHHHHHHHHHHHHTCCE
T ss_pred HHhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCeE
Confidence 111 12478999998766 67666777776654434444
No 92
>1s4n_A Glycolipid 2-alpha-mannosyltransferase; alpha/beta fold, nucleotide-binding domain, rossmann fold; HET: NAG BMA MAN NDG; 2.01A {Saccharomyces cerevisiae} SCOP: c.68.1.16 PDB: 1s4o_A* 1s4p_A*
Probab=31.41 E-value=85 Score=24.65 Aligned_cols=117 Identities=10% Similarity=0.072 Sum_probs=62.3
Q ss_pred CCCcEEEEEeCcccc-ccHHHHHHHHHhhhcC-CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCC-------C
Q 026146 7 NKNKYSIIIPTYNER-LNIALIVYLIFKHLRD-VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPK-------K 77 (242)
Q Consensus 7 ~~~~isiiip~~n~~-~~l~~~l~sl~~~~~~-~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~-------~ 77 (242)
..+.-++|+.+.|++ ..+.+++++|...... .++.++++.|.. -|.+..+...+..+ ..+.+..-++ .
T Consensus 25 ~r~nAtfV~L~RN~el~~~l~Si~~vE~rFN~~y~YpwvFlNd~p--FteeFk~~~~~~~s-g~v~Fg~Ip~e~W~~P~~ 101 (348)
T 1s4n_A 25 GKPKACYVTLVRNKELKGLLSSIKYVENKINKKFPYPWVFLNDEP--FTEEFKEAVTKAVS-SEVKFGILPKEHWSYPEW 101 (348)
T ss_dssp SCCCEEEEEECCGGGHHHHHHHHHHHHHHTTTTSCCCEEEEESSC--CCHHHHHHHHHHCS-SCEEEEECCGGGSSCCTT
T ss_pred CCCceEEEEEeccHHHHHHHHHHHHHHHHhhccCCCCEEEecCCC--CCHHHHHHHHHhcC-cceEEEEcCHHHcCCCCC
Confidence 357889999999954 3334444444444332 578899999876 33333333333222 3455543221 1
Q ss_pred cchHH---HHH---------------------HHH--h---hcCCCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146 78 LGLGT---AYI---------------------HGL--K---HASGSFVVIMDADLSHHPKYLPSFIKKQLETGASIVT 126 (242)
Q Consensus 78 ~g~~~---a~n---------------------~g~--~---~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~ 126 (242)
.-... ++. -|+ + ..+.+|.+=+++|..+.=+.--...+.+++++.....
T Consensus 102 Id~~~a~~~~~~~~~~i~Yg~s~sYr~MCRf~SG~F~~h~~l~~YdyYWRvEPdv~~~CDi~YDpF~~M~~nnK~YGF 179 (348)
T 1s4n_A 102 INQTKAAEIRADAATKYIYGGSESYRHMCRYQSGFFWRHELLEEYDWYWRVEPDIKLYCDINYDVFKWMQENEKVYGF 179 (348)
T ss_dssp SCHHHHHHHHHHHTTTSTTTTCHHHHHHHHHHHHTGGGSGGGTTCSEEEECCTTCEECSCCCSCHHHHHHHTTCCEEE
T ss_pred cCHHHHHHHHHHHhcCCccCCCcchhhhhhhhhhhhccCcccccCceEEEeCCCceeecCCCCCccHHhHhcCceEEE
Confidence 11111 111 111 0 1246999999999886555544455566555444433
No 93
>3h7c_X Agmatine deiminase; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; HET: MSE 211 1PE; 1.50A {Arabidopsis thaliana} SCOP: d.126.1.6 PDB: 1vkp_A* 2q3u_A* 3h7k_A*
Probab=31.02 E-value=55 Score=26.16 Aligned_cols=33 Identities=9% Similarity=0.310 Sum_probs=24.3
Q ss_pred EEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEe
Q 026146 12 SIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVD 46 (242)
Q Consensus 12 siiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd 46 (242)
.||+|+|+..+.=..+++.|.+.. ++-+||=|+
T Consensus 320 ~VivP~fgd~~~D~~A~~~l~~~f--P~R~Vv~I~ 352 (383)
T 3h7c_X 320 GIIAPQFGDPIRDKEAIRVLSDTF--PHHSVVGIE 352 (383)
T ss_dssp EEEEECCCCTTHHHHHHHHHHHHC--TTSEEEEET
T ss_pred EEEEecCCCcccHHHHHHHHHHHC--CCCEEEeCc
Confidence 589999997645556777776654 566888886
No 94
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=30.61 E-value=1.8e+02 Score=22.08 Aligned_cols=90 Identities=8% Similarity=-0.029 Sum_probs=48.5
Q ss_pred CCcEEEEEe--CccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHH
Q 026146 8 KNKYSIIIP--TYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYI 85 (242)
Q Consensus 8 ~~~isiiip--~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n 85 (242)
..+|.+|+| ..+...+....++.+.+......+++++++..+..+..+.++.+.+.. ....++... ....+..
T Consensus 4 ~~~Ig~v~~~g~~~d~~f~~~~~~Gi~~~~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~--~dgIi~~~~---~~~~~~~ 78 (318)
T 2fqx_A 4 DFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAKCKYVTASTDAEYVPSLSAFADEN--MGLVVACGS---FLVEAVI 78 (318)
T ss_dssp CCEEEEEESSSCTTSSSHHHHHHHHHHHHHHHTTCEEEEEECCSGGGHHHHHHHHHHTT--CSEEEEEST---TTHHHHH
T ss_pred CcEEEEEEcCCCCCCccHHHHHHHHHHHHHHHhCCeEEEEeCCCHHHHHHHHHHHHHcC--CCEEEECCh---hHHHHHH
Confidence 357888988 444435666666666555433567888887644434455677766542 345555432 2223343
Q ss_pred HHHhhcCCCEEEEEeCC
Q 026146 86 HGLKHASGSFVVIMDAD 102 (242)
Q Consensus 86 ~g~~~a~~d~i~~lD~D 102 (242)
...+...+--++++|..
T Consensus 79 ~~a~~~p~~p~v~id~~ 95 (318)
T 2fqx_A 79 ETSARFPKQKFLVIDAV 95 (318)
T ss_dssp HHHHHCTTSCEEEESSC
T ss_pred HHHHHCCCCEEEEEcCc
Confidence 33333223335566653
No 95
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=30.16 E-value=1.7e+02 Score=21.65 Aligned_cols=54 Identities=17% Similarity=0.129 Sum_probs=32.3
Q ss_pred CcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHH
Q 026146 9 NKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQL 63 (242)
Q Consensus 9 ~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~ 63 (242)
.+|.+++|.... .+....++.+.+......+++++++..+.+.-.+.++.+...
T Consensus 3 ~~Ig~i~~~~~~-~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~i~~l~~~ 56 (306)
T 8abp_A 3 LKLGFLVKQPEE-PWFQTEWKFADKAGKDLGFEVIKIAVPDGEKTLNAIDSLAAS 56 (306)
T ss_dssp EEEEEEESCTTS-HHHHHHHHHHHHHHHHHTEEEEEEECCSHHHHHHHHHHHHHT
T ss_pred eEEEEEeCCCCc-hHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHHHHc
Confidence 468888887643 445556666655544457899888763222234456666554
No 96
>3kcq_A Phosphoribosylglycinamide formyltransferase; structural genomics, niaid, seattle structural center for infectious disease, ssgcid; 2.20A {Anaplasma phagocytophilum} SCOP: c.65.1.0
Probab=28.83 E-value=1.6e+02 Score=21.18 Aligned_cols=93 Identities=12% Similarity=0.054 Sum_probs=46.6
Q ss_pred CCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEE-eCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHH
Q 026146 8 KNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVV-DDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIH 86 (242)
Q Consensus 8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivv-d~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~ 86 (242)
+.+|.|++ -....+++.+++.+.+.. .+.+|..| .|..+-...+. +.++ +..+.++... +. ...+.-.
T Consensus 8 ~~ri~vl~--SG~gsnl~all~~~~~~~--~~~~I~~Vis~~~~a~~l~~----A~~~-gIp~~~~~~~-~~-~~~~~~~ 76 (215)
T 3kcq_A 8 ELRVGVLI--SGRGSNLEALAKAFSTEE--SSVVISCVISNNAEARGLLI----AQSY-GIPTFVVKRK-PL-DIEHIST 76 (215)
T ss_dssp CEEEEEEE--SSCCHHHHHHHHHTCCC---CSEEEEEEEESCTTCTHHHH----HHHT-TCCEEECCBT-TB-CHHHHHH
T ss_pred CCEEEEEE--ECCcHHHHHHHHHHHcCC--CCcEEEEEEeCCcchHHHHH----HHHc-CCCEEEeCcc-cC-ChHHHHH
Confidence 34454444 455667777777764321 23565544 33332233333 3333 2344443322 22 2355566
Q ss_pred HHhhcCCCEEEEEeCCCCCCCCChH
Q 026146 87 GLKHASGSFVVIMDADLSHHPKYLP 111 (242)
Q Consensus 87 g~~~a~~d~i~~lD~D~~~~~~~l~ 111 (242)
.++..+.|+++..----++++.+++
T Consensus 77 ~L~~~~~Dlivlagy~~IL~~~~l~ 101 (215)
T 3kcq_A 77 VLREHDVDLVCLAGFMSILPEKFVT 101 (215)
T ss_dssp HHHHTTCSEEEESSCCSCCCHHHHH
T ss_pred HHHHhCCCEEEEeCCceEeCHHHHh
Confidence 6677777887777665555555443
No 97
>2rli_A SCO2 protein homolog, mitochondrial; copper protein, thioredoxin fold, metal transport, structural genomics, spine2-complexes; NMR {Homo sapiens}
Probab=28.33 E-value=52 Score=21.99 Aligned_cols=34 Identities=12% Similarity=0.099 Sum_probs=22.1
Q ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEe
Q 026146 38 VDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLR 72 (242)
Q Consensus 38 ~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~ 72 (242)
..++++.|.-....++.+.++++.+.++ ....++
T Consensus 63 ~~v~vv~is~d~~~d~~~~~~~~~~~~~-~~~~~l 96 (171)
T 2rli_A 63 PPVQPVFITVDPERDDVEAMARYVQDFH-PRLLGL 96 (171)
T ss_dssp CCEEEEEEESCSTTCCHHHHHHHHHTTC-TTCCEE
T ss_pred CceEEEEEEECCCCCCHHHHHHHHHHcC-CCeEEE
Confidence 4788888876554456777888877664 333343
No 98
>3hvm_A Agmatine deiminase; hydrolase; 2.10A {Helicobacter pylori} SCOP: d.126.1.6 PDB: 2cmu_A
Probab=27.59 E-value=81 Score=24.60 Aligned_cols=31 Identities=42% Similarity=0.562 Sum_probs=21.2
Q ss_pred EEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEe
Q 026146 12 SIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVD 46 (242)
Q Consensus 12 siiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd 46 (242)
.||+|+|+.+. =..+++.|.+.. ++ +||=|+
T Consensus 281 ~VivP~fgd~~-D~~A~~~l~~~f--P~-~Vv~i~ 311 (330)
T 3hvm_A 281 ALIVPTYNDPK-DALILETLKQHT--PL-EVIGVD 311 (330)
T ss_dssp EEEEEECSCTT-HHHHHHHHHTTC--SS-EEEEEE
T ss_pred EEEEecCCChH-HHHHHHHHHHhC--CC-CEEEEE
Confidence 57889998653 445666665543 57 888886
No 99
>2ggt_A SCO1 protein homolog, mitochondrial; copper chaperone, Cu-binding protein, mitochondrial assembly factor, redox, nickel, disuplhide, mitochondrion; 2.40A {Homo sapiens} SCOP: c.47.1.10 PDB: 2gqk_A 2gql_A 2gqm_A 2gt5_A 2gt6_A 2gvp_A 2hrf_A 2hrn_A 1wp0_A
Probab=27.14 E-value=63 Score=21.32 Aligned_cols=33 Identities=9% Similarity=0.207 Sum_probs=23.0
Q ss_pred CeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEe
Q 026146 39 DFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLR 72 (242)
Q Consensus 39 ~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~ 72 (242)
.++++.|.-....++.+.++++.+.++ ....++
T Consensus 61 ~~~vv~vs~d~~~d~~~~~~~~~~~~~-~~~~~l 93 (164)
T 2ggt_A 61 DLTPLFISIDPERDTKEAIANYVKEFS-PKLVGL 93 (164)
T ss_dssp CEEEEEEESCTTTCCHHHHHHHHHTTC-SSCEEE
T ss_pred cEEEEEEEeCCCCCCHHHHHHHHHHcC-CCeEEE
Confidence 788888876655567778888887764 344444
No 100
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=26.74 E-value=1.7e+02 Score=20.67 Aligned_cols=61 Identities=20% Similarity=0.243 Sum_probs=35.0
Q ss_pred CeEEEEEeCCCCCC-hHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeCCCC
Q 026146 39 DFEIIVVDDGSPDG-TQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLS 104 (242)
Q Consensus 39 ~~eiivvd~~s~d~-t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~ 104 (242)
.-.|++|||.-+-+ |...+.+.....+...+.+.. ...+..++.. +.... +++.+--.+..
T Consensus 120 gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~---~v~~~~~~~~-l~~~~-~~v~~~~~~~f 181 (208)
T 1wd5_A 120 GRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAV---PVASPEAVER-LKARA-EVVALSVPQDF 181 (208)
T ss_dssp TSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEE---EEBCHHHHHH-HHTTS-EEEEEECCTTC
T ss_pred CCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEE---EEcCHHHHHH-hcccC-cEEEEecCcch
Confidence 44899999988655 666666655554433454443 2233344433 33444 88887765544
No 101
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=26.61 E-value=1.2e+02 Score=19.05 Aligned_cols=96 Identities=13% Similarity=0.168 Sum_probs=58.8
Q ss_pred ccccHHHHHHHHHhhhcCCCeEEEEEeCCCC-CChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhh-cCCCEEE
Q 026146 20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSP-DGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKH-ASGSFVV 97 (242)
Q Consensus 20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~-d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~-a~~d~i~ 97 (242)
.++.+.+.+..++.|- ..++++-...+ ....+-++++.+. +..++-+..+ -....+...-++. .+-|.++
T Consensus 11 dpeilkeivreikrqg----vrvvllysdqdekrrrerleefekq--gvdvrtvedk--edfrenireiwerypqldvvv 82 (162)
T 2l82_A 11 DPEILKEIVREIKRQG----VRVVLLYSDQDEKRRRERLEEFEKQ--GVDVRTVEDK--EDFRENIREIWERYPQLDVVV 82 (162)
T ss_dssp CHHHHHHHHHHHHHTT----CEEEEEECCSCHHHHHHHHHHHHTT--TCEEEECCSH--HHHHHHHHHHHHHCTTCCEEE
T ss_pred CHHHHHHHHHHHHhCC----eEEEEEecCchHHHHHHHHHHHHHc--CCceeeeccH--HHHHHHHHHHHHhCCCCcEEE
Confidence 4566778888888772 34444433222 2355667776554 2345544433 2355555555654 4578888
Q ss_pred EEeCCCCCCCCChHHHHHHHHhcCCcEEE
Q 026146 98 IMDADLSHHPKYLPSFIKKQLETGASIVT 126 (242)
Q Consensus 98 ~lD~D~~~~~~~l~~l~~~~~~~~~~~v~ 126 (242)
++-.| +..|+..+++...+.+..+.+
T Consensus 83 ivttd---dkewikdfieeakergvevfv 108 (162)
T 2l82_A 83 IVTTD---DKEWIKDFIEEAKERGVEVFV 108 (162)
T ss_dssp EEECC---CHHHHHHHHHHHHHTTCEEEE
T ss_pred EEecC---cHHHHHHHHHHHHhcCcEEEE
Confidence 88777 357999999888776666544
No 102
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=25.26 E-value=1.7e+02 Score=20.29 Aligned_cols=54 Identities=11% Similarity=0.107 Sum_probs=37.9
Q ss_pred CCCCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHh
Q 026146 6 KNKNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLY 64 (242)
Q Consensus 6 ~~~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~ 64 (242)
.+.|+|.||+=.-...+..+++...|... . -.+|+-|+ |...|.+.+.++.+..
T Consensus 10 ~~~P~V~IimGS~SD~~v~~~a~~~l~~~-g-i~~ev~V~---saHR~p~~l~~~~~~a 63 (173)
T 4grd_A 10 HSAPLVGVLMGSSSDWDVMKHAVAILQEF-G-VPYEAKVV---SAHRMPDEMFDYAEKA 63 (173)
T ss_dssp CSSCSEEEEESSGGGHHHHHHHHHHHHHT-T-CCEEEEEC---CTTTSHHHHHHHHHHH
T ss_pred CCCCeEEEEeCcHhHHHHHHHHHHHHHHc-C-CCEEEEEE---ccccCHHHHHHHHHHH
Confidence 35688999988888777778887777543 2 46787776 5556677777766554
No 103
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=24.84 E-value=92 Score=19.81 Aligned_cols=69 Identities=12% Similarity=0.086 Sum_probs=37.0
Q ss_pred HHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEe-eCCCCcchHHHHHHHHhhcCCCEEEEEeCC
Q 026146 24 IALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLR-PRPKKLGLGTAYIHGLKHASGSFVVIMDAD 102 (242)
Q Consensus 24 l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~-~~~~~~g~~~a~n~g~~~a~~d~i~~lD~D 102 (242)
..+++.++.+. ...++|+.+..++.+..-++.++..+. .++..+ ......|.+ . |.. ...-.+.++|..
T Consensus 31 ~~~t~kai~~g----kakLVilA~D~~~~~~~~i~~~c~~~~-ipv~~~~~s~~eLG~A--~--Gk~-~~v~~vaI~D~G 100 (112)
T 3iz5_f 31 YKTVLKTLRSS----LGKLIILANNCPPLRKSEIETYAMLAK-ISVHHFHGNNVDLGTA--C--GKY-YRVCCLSILDPG 100 (112)
T ss_dssp HHHHHHHHHTT----CCSEEEECSCCCHHHHHHHHHHHHHTT-CCEECCCCTTCTHHHH--H--CTT-CSSCEEEEECCS
T ss_pred HHHHHHHHHcC----CceEEEEeCCCCHHHHHHHHHHHHHcC-CcEEEeCCCHHHHHHH--h--CCc-cceEEEEEeccc
Confidence 34566666544 235566655555677887888877764 344444 333334433 2 111 122457777764
No 104
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=24.31 E-value=1.1e+02 Score=19.36 Aligned_cols=40 Identities=10% Similarity=0.222 Sum_probs=30.4
Q ss_pred cccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHH
Q 026146 19 NERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQ 61 (242)
Q Consensus 19 n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~ 61 (242)
...+.+.++++.+.+. .++-||+++..-.+.-.+.++++.
T Consensus 29 ~~~ee~~~~~~~l~~~---~digIIlIte~~a~~i~~~i~~~~ 68 (109)
T 2d00_A 29 SSAEEAQSLLETLVER---GGYALVAVDEALLPDPERAVERLM 68 (109)
T ss_dssp SSHHHHHHHHHHHHHH---CCCSEEEEETTTCSCHHHHHHHHT
T ss_pred CCHHHHHHHHHHHhhC---CCeEEEEEeHHHHHhhHHHHHHHH
Confidence 3446677777777654 467899999988888888888885
No 105
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=23.92 E-value=1.5e+02 Score=19.21 Aligned_cols=47 Identities=15% Similarity=0.138 Sum_probs=28.3
Q ss_pred HHHHHHHHHhhhcCCCeEEEEE-eCCCCCChHHHHHHHHHHhCCCcEEEeeCC
Q 026146 24 IALIVYLIFKHLRDVDFEIIVV-DDGSPDGTQEVVKQLQQLYGEDRILLRPRP 75 (242)
Q Consensus 24 l~~~l~sl~~~~~~~~~eiivv-d~~s~d~t~~~l~~~~~~~~~~~~~~~~~~ 75 (242)
+.+++..+.+. ...++|+ .|.++..+...+..++..+. .++.++...
T Consensus 29 ~~~v~Kai~~g----ka~LViiA~D~~p~~~~~~i~~lc~~~~-Ip~~~v~sk 76 (126)
T 2xzm_U 29 LHEVLRTIEAK----QALFVCVAEDCDQGNYVKLVKALCAKNE-IKYVSVPKR 76 (126)
T ss_dssp HHHHHHHHHHT----CCSEEEEESSCCSTTHHHHHHHHHHHTT-CCEEEESCS
T ss_pred HHHHHHHHHcC----CceEEEEeCCCChHHHHHHHHHHHHHhC-CCEEEECCH
Confidence 34566666543 2344444 55556688888988888764 455555433
No 106
>1xkn_A Putative peptidyl-arginine deiminase; alpha-beta protein, NESG, structural genomics, protein struc initiative, PSI; 1.60A {Chlorobium tepidum} SCOP: d.126.1.6
Probab=22.80 E-value=96 Score=24.47 Aligned_cols=32 Identities=16% Similarity=0.304 Sum_probs=21.1
Q ss_pred EEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEe
Q 026146 12 SIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVD 46 (242)
Q Consensus 12 siiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd 46 (242)
.||+|+|+... =+.+++.|.+.. +..+||-||
T Consensus 295 ~VivP~fgd~~-D~~A~~~L~~~f--P~r~Vi~v~ 326 (355)
T 1xkn_A 295 VVLVPTYRCPR-DQQAIDILQQCF--PKREVVGID 326 (355)
T ss_dssp EEEEEECSSTH-HHHHHHHHHHHC--TTSEEEEEE
T ss_pred EEEEeeCCCcc-cHHHHHHHHHHC--CCCEEEEee
Confidence 57788888654 445666665553 566888886
No 107
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=22.76 E-value=2.8e+02 Score=21.69 Aligned_cols=89 Identities=7% Similarity=-0.033 Sum_probs=47.6
Q ss_pred CcEEEEEeC-ccccccHHHHHHHHHhhhcC--CCeEEEEEeCCCCC-ChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHH
Q 026146 9 NKYSIIIPT-YNERLNIALIVYLIFKHLRD--VDFEIIVVDDGSPD-GTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAY 84 (242)
Q Consensus 9 ~~isiiip~-~n~~~~l~~~l~sl~~~~~~--~~~eiivvd~~s~d-~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~ 84 (242)
.+|.+|+|- .+...+.....+.+.+.... ..++++++++.+++ +..+.++++.++. ..+.+... .+...+.
T Consensus 27 ~kIglv~~g~i~D~~f~~~~~~G~~~~~~~~G~~~~~~~~e~~~~~~d~~~~l~~l~~~g--~d~Ii~~g---~~~~~~~ 101 (356)
T 3s99_A 27 LKVGFIYIGPPGDFGWTYQHDQARKELVEALGDKVETTFLENVAEGADAERSIKRIARAG--NKLIFTTS---FGYMDPT 101 (356)
T ss_dssp EEEEEECSSCGGGSSHHHHHHHHHHHHHHHHTTTEEEEEECSCCTTHHHHHHHHHHHHTT--CSEEEECS---GGGHHHH
T ss_pred CEEEEEEccCCCchhHHHHHHHHHHHHHHHhCCceEEEEEecCCCHHHHHHHHHHHHHCC--CCEEEECC---HHHHHHH
Confidence 457777763 33334555555555443322 23899988876543 4566777777652 35555432 2344444
Q ss_pred HHHHhhcCCCEEEEEeCC
Q 026146 85 IHGLKHASGSFVVIMDAD 102 (242)
Q Consensus 85 n~g~~~a~~d~i~~lD~D 102 (242)
....+.-..-.++++|..
T Consensus 102 ~~vA~~~Pdv~fv~id~~ 119 (356)
T 3s99_A 102 VKVAKKFPDVKFEHATGY 119 (356)
T ss_dssp HHHHTTCTTSEEEEESCC
T ss_pred HHHHHHCCCCEEEEEecc
Confidence 444333233345556654
No 108
>3lor_A Thiol-disulfide isomerase and thioredoxins; PSI, MCSG, structural genomics, midwest CE structural genomics; HET: MSE; 2.20A {Corynebacterium glutamicum}
Probab=22.27 E-value=1.7e+02 Score=18.99 Aligned_cols=77 Identities=10% Similarity=0.099 Sum_probs=36.7
Q ss_pred HHHHHHhhhcCCCeEEEEEeCCC---CCChHHHHHHHHHHhCCCcEEEee-CCCCcchHHHHHHHHhhcCCCEEEEEeCC
Q 026146 27 IVYLIFKHLRDVDFEIIVVDDGS---PDGTQEVVKQLQQLYGEDRILLRP-RPKKLGLGTAYIHGLKHASGSFVVIMDAD 102 (242)
Q Consensus 27 ~l~sl~~~~~~~~~eiivvd~~s---~d~t~~~l~~~~~~~~~~~~~~~~-~~~~~g~~~a~n~g~~~a~~d~i~~lD~D 102 (242)
.+..+.+......++++.|+-.. .+++.+.++++.+.++. ...++. .....+........+.....+.++++|.|
T Consensus 52 ~l~~l~~~~~~~~v~~v~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~~v~~~P~~~lid~~ 130 (160)
T 3lor_A 52 QAQKIHRMIDESQVQVIGLHSVFEHHDVMTPEALKVFIDEFGI-KFPVAVDMPREGQRIPSTMKKYRLEGTPSIILADRK 130 (160)
T ss_dssp HHHHHHHHSCTTTEEEEEEECCCSCGGGSCHHHHHHHHHHTTC-CSCEEEECCCTTCSSCHHHHHTTCCSSSEEEEECTT
T ss_pred HHHHHHHHhCcCCcEEEEEeccccccccCCHHHHHHHHHHcCC-CCcEEECCccccchhhhHHHhcccCccceEEEECCC
Confidence 44455444332458888886321 13466777777776642 222222 22111111112222223345778888877
Q ss_pred CC
Q 026146 103 LS 104 (242)
Q Consensus 103 ~~ 104 (242)
..
T Consensus 131 G~ 132 (160)
T 3lor_A 131 GR 132 (160)
T ss_dssp SB
T ss_pred Cc
Confidence 43
No 109
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae}
Probab=22.05 E-value=3.4e+02 Score=22.45 Aligned_cols=105 Identities=20% Similarity=0.191 Sum_probs=57.4
Q ss_pred ccccHHHHHHHHHhhhc--CCCeEEEEEeCCCCCChHHHHHHHHHHhC--CCcEEEeeCC--------------------
Q 026146 20 ERLNIALIVYLIFKHLR--DVDFEIIVVDDGSPDGTQEVVKQLQQLYG--EDRILLRPRP-------------------- 75 (242)
Q Consensus 20 ~~~~l~~~l~sl~~~~~--~~~~eiivvd~~s~d~t~~~l~~~~~~~~--~~~~~~~~~~-------------------- 75 (242)
....++-.++.+.+... ...+.++|+..+. +.+.++++.+.+. +.++.++...
T Consensus 120 gk~~Le~~i~~i~~l~~~~G~~Ip~vImts~~---t~e~t~~~~~~~~~fg~~i~~f~Q~~~P~i~~d~~~~l~~~~~~~ 196 (488)
T 2i5k_A 120 GNTFLDLSVRQIEYLNRQYDSDVPLLLMNSFN---TDKDTEHLIKKYSANRIRIRSFNQSRFPRVYKDSLLPVPTEYDSP 196 (488)
T ss_dssp TBCHHHHHHHHHHHHHHHHTCCCEEEEECCTT---THHHHHHHHGGGCSSSCEEEEECCCCEECEETTTCCBSCSSSSSC
T ss_pred CCcHHHHHHHHHHHhHHhcCCCccEEEEECCC---CHHHHHHHHHhccccCceEEEEEeCccceEccccceeeccCCCCC
Confidence 44566666666654421 1245677775533 3333444443322 1245555333
Q ss_pred ----CCcchHHHHHHH-----Hhh--cC-CCEEEEEeCCCCCCCCChHHHHHHHHhcCCcEEEEE
Q 026146 76 ----KKLGLGTAYIHG-----LKH--AS-GSFVVIMDADLSHHPKYLPSFIKKQLETGASIVTGT 128 (242)
Q Consensus 76 ----~~~g~~~a~n~g-----~~~--a~-~d~i~~lD~D~~~~~~~l~~l~~~~~~~~~~~v~~~ 128 (242)
...|.+++.... +.. .. .+|++++.+|.......+. ++....+.+.++..-.
T Consensus 197 ~~~~~P~GtGga~~~L~~sg~l~~l~~~g~~~v~V~ngDnL~~~~d~~-~L~~~~~~~a~~t~~v 260 (488)
T 2i5k_A 197 LDAWYPPGHGDLFESLHVSGELDALIAQGREILFVSNGDNLGATVDLK-ILNHMIETGAEYIMEL 260 (488)
T ss_dssp TTSEECCCGGGHHHHHHHHTHHHHHHHTTCCEEEEECTTBSSCCCCHH-HHHHHHHSCCSEEEEE
T ss_pred ceeeecCCCchhhhhhhhcCcHHHHHhcCCCEEEEEeCCcCCCcccHH-HHHHHHhcCCcEEEEE
Confidence 445767676521 232 23 5899999999966666665 4466656666665543
No 110
>1zbr_A AAQ65385, conserved hypothetical protein; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.60A {Porphyromonas gingivalis} SCOP: d.126.1.6
Probab=22.03 E-value=84 Score=24.72 Aligned_cols=32 Identities=28% Similarity=0.523 Sum_probs=21.6
Q ss_pred EEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEe
Q 026146 12 SIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVD 46 (242)
Q Consensus 12 siiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd 46 (242)
.||+|+|+... =+.+++.|.+.. +..+||-|+
T Consensus 286 ~VivP~fgd~~-D~~A~~~l~~~f--P~r~Vv~i~ 317 (349)
T 1zbr_A 286 AVLVPTYDSHL-DAVALSVMQGLF--PDREVIGID 317 (349)
T ss_dssp EEEEEECSSTT-TTHHHHHHHHHC--TTSEEEEEE
T ss_pred EEEEeeCCCcc-cHHHHHHHHHHC--CCCEEEEee
Confidence 68889998654 344666665553 566888886
No 111
>1sn9_A BBAT, tetrameric beta-BETA-alpha mini-protein; protein design, domain swapping, oligomerization, de novo protein; HET: DBZ; 1.20A {Synthetic} SCOP: k.14.1.1 PDB: 1sna_A* 1sne_A* 1xof_B* 1xof_A*
Probab=21.76 E-value=26 Score=15.08 Aligned_cols=15 Identities=27% Similarity=0.476 Sum_probs=8.5
Q ss_pred EeCccccccHHHHHH
Q 026146 15 IPTYNERLNIALIVY 29 (242)
Q Consensus 15 ip~~n~~~~l~~~l~ 29 (242)
||.|+-.+.+.+.++
T Consensus 4 ipsydfadelakllr 18 (26)
T 1sn9_A 4 IPSYDFADELAKLLR 18 (26)
T ss_dssp BTTBCHHHHHHHHHH
T ss_pred CCccchHHHHHHHHH
Confidence 577775555554444
No 112
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20
Probab=21.65 E-value=1.2e+02 Score=23.40 Aligned_cols=92 Identities=10% Similarity=0.097 Sum_probs=46.9
Q ss_pred eCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHh--hc-C
Q 026146 16 PTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLK--HA-S 92 (242)
Q Consensus 16 p~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~--~a-~ 92 (242)
|..++...|..+++.+..... .-+++|+-+.. ....+.+. .+...+ ++. +...|.+.+.-.+.. .. .
T Consensus 30 ~l~G~~pli~~~l~~l~~~~~--~~~iiVvt~~~---~~~~i~~~---l~~~~~-i~e-~~~~gta~ai~~a~~l~~~~~ 99 (337)
T 2cu2_A 30 PLFEGKTLLEATLERLAPLVP--PERTLLAVRRD---QEAVARPY---ADGIRL-LLE-PLGRDTAGAVLLGVAEALKEG 99 (337)
T ss_dssp BCGGGCBHHHHHHHHHTTTSC--GGGEEEEEEGG---GHHHHGGG---CSSSEE-EEE-SSCCHHHHHHHHHHHHHHHHT
T ss_pred EcCCCChHHHHHHHHHhCcCC--CCCEEEEcChH---HHHHHHHH---hccCce-Eec-CCCCCcHHHHHHHHHHhccCC
Confidence 333435667777777754411 12455554421 12222221 221122 333 334566665555544 22 3
Q ss_pred CCEEEEEeCCCCC-CCCChHHHHHHH
Q 026146 93 GSFVVIMDADLSH-HPKYLPSFIKKQ 117 (242)
Q Consensus 93 ~d~i~~lD~D~~~-~~~~l~~l~~~~ 117 (242)
.++++++.+|..+ +++.+..+++.+
T Consensus 100 ~~~~lvl~~D~~~~~~~~~~~~l~~~ 125 (337)
T 2cu2_A 100 AERLLVLPADHYVGDDEAYREALATM 125 (337)
T ss_dssp CSEEEEEESSCEESCHHHHHHHHHHH
T ss_pred CCEEEEEECCccCCCHHHHHHHHHHH
Confidence 6899999999885 445565555543
No 113
>2i4r_A V-type ATP synthase subunit F; NESG, GR52A, ATP synthesis, hydrolase, structural genomics, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.149.1.1
Probab=21.49 E-value=61 Score=20.30 Aligned_cols=51 Identities=12% Similarity=0.053 Sum_probs=33.7
Q ss_pred ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEee
Q 026146 20 ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRP 73 (242)
Q Consensus 20 ~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~ 73 (242)
..+.+.++++.+.+. .++-||++...-.+.-.+.++++..+...+-+..+.
T Consensus 37 ~~ee~~~~~~~l~~~---~digIIlIte~ia~~i~~~i~~~~~~~~~P~IieIP 87 (102)
T 2i4r_A 37 SDEEIVKAVEDVLKR---DDVGVVIMKQEYLKKLPPVLRREIDEKVEPTFVSVG 87 (102)
T ss_dssp SHHHHHHHHHHHHHC---SSEEEEEEEGGGSTTSCHHHHTTTTTCCSSEEEEEC
T ss_pred CHHHHHHHHHHHhhC---CCeEEEEEeHHHHHHHHHHHHHHHhCCCccEEEEEC
Confidence 345566677766543 588999999988888788888776642222444443
No 114
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=21.33 E-value=2.7e+02 Score=21.09 Aligned_cols=92 Identities=13% Similarity=0.099 Sum_probs=49.8
Q ss_pred CCcEEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCC-hHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHH
Q 026146 8 KNKYSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDG-TQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIH 86 (242)
Q Consensus 8 ~~~isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~-t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~ 86 (242)
.++|.+++|......+....++.+.+......+++++++...+.. -.+.++++..........++.... . +...
T Consensus 3 ~~~Ig~i~p~~~~~~f~~~~~~g~~~~a~~~g~~~~~~~~~~~~~~~~~~i~~~i~~~~~vDgiIi~~~~--~---~~~~ 77 (350)
T 3h75_A 3 LTSVVFLNPGNSTETFWVSYSQFMQAAARDLGLDLRILYAERDPQNTLQQARELFQGRDKPDYLMLVNEQ--Y---VAPQ 77 (350)
T ss_dssp CCEEEEEECSCTTCHHHHHHHHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHHHSSSCCSEEEEECCS--S---HHHH
T ss_pred CCEEEEECCCCCCChHHHHHHHHHHHHHHHcCCeEEEEECCCCHHHHHHHHHHHHhcCCCCCEEEEeCch--h---hHHH
Confidence 468999999876545666666666655444567888886543322 234566665530123444443221 1 1222
Q ss_pred HHhhc--CCCEEEEEeCCCC
Q 026146 87 GLKHA--SGSFVVIMDADLS 104 (242)
Q Consensus 87 g~~~a--~~d~i~~lD~D~~ 104 (242)
.++.+ .+=-++++|.+..
T Consensus 78 ~~~~~~~~giPvV~~~~~~~ 97 (350)
T 3h75_A 78 ILRLSQGSGIKLFIVNSPLT 97 (350)
T ss_dssp HHHHHTTSCCEEEEEESCCC
T ss_pred HHHHHHhCCCcEEEEcCCCC
Confidence 33333 3445677777644
No 115
>3fw2_A Thiol-disulfide oxidoreductase; structural genomics, APC61456.1, thiol-disulfide oxidoreduct TLPA-like family, PSI-2; 1.74A {Bacteroides thetaiotaomicron}
Probab=21.31 E-value=1.7e+02 Score=18.79 Aligned_cols=73 Identities=8% Similarity=-0.066 Sum_probs=38.9
Q ss_pred HHHHHHHhhh-cCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcCCCEEEEEeCCCC
Q 026146 26 LIVYLIFKHL-RDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHASGSFVVIMDADLS 104 (242)
Q Consensus 26 ~~l~sl~~~~-~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~~d~i~~lD~D~~ 104 (242)
..+..+.+.. ....++++.|+-. ...+.++++.+.++. ...++... .+........+.....+.++++|.|..
T Consensus 55 ~~l~~l~~~~~~~~~~~~v~v~~d---~~~~~~~~~~~~~~~-~~~~~~d~--~~~~~~~~~~~~v~~~P~~~lid~~G~ 128 (150)
T 3fw2_A 55 SELREIYKKYKKNKYIGMLGISLD---VDKQQWKDAIKRDTL-DWEQVCDF--GGLNSEVAKQYSIYKIPANILLSSDGK 128 (150)
T ss_dssp HHHHHHHHHHTTCSSEEEEEEECC---SCHHHHHHHHHHTTC-CSEEECCS--CGGGCHHHHHTTCCSSSEEEEECTTSB
T ss_pred HHHHHHHHHhccCCCeEEEEEEcC---CCHHHHHHHHHHhCC-CceEEEcC--cccchHHHHHcCCCccCeEEEECCCCE
Confidence 3455555554 3346888888543 334566677666542 33344322 121222233333335688889988866
No 116
>3h11_A CAsp8 and FADD-like apoptosis regulator; cell death, apoptosis, caspase, alternative splicing, HOST- virus interaction, polymorphism, cytoplasm, disease mutation; 1.90A {Homo sapiens} PDB: 3h13_A
Probab=21.28 E-value=2.6e+02 Score=20.98 Aligned_cols=48 Identities=15% Similarity=0.089 Sum_probs=32.6
Q ss_pred CCcEEEEEeCcc-ccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHH
Q 026146 8 KNKYSIIIPTYN-ERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQ 62 (242)
Q Consensus 8 ~~~isiiip~~n-~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~ 62 (242)
...+.+||-..+ ..+.|.++++.| .|+|.+..|-+.++..+.++++++
T Consensus 42 ~rG~~LIinn~~~D~~~L~~~f~~L-------gF~V~~~~dlt~~em~~~l~~~~~ 90 (272)
T 3h11_A 42 PLGICLIIDCIGNETELLRDTFTSL-------GYEVQKFLHLSMHGISQILGQFAC 90 (272)
T ss_dssp SSEEEEEEESSCCCCSHHHHHHHHH-------TEEEEEEESCBHHHHHHHHHHHHT
T ss_pred cceEEEEECCchHHHHHHHHHHHHC-------CCEEEEeeCCCHHHHHHHHHHHHh
Confidence 346777777665 334444444433 679999999887778888888765
No 117
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=21.16 E-value=1.5e+02 Score=20.16 Aligned_cols=68 Identities=6% Similarity=0.049 Sum_probs=33.3
Q ss_pred HHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHhhcC----------CCEEEE
Q 026146 29 YLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLKHAS----------GSFVVI 98 (242)
Q Consensus 29 ~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~~a~----------~d~i~~ 98 (242)
..+.+......++|+.|.-. +.+.++++.+.+. ....++... + ...+...++.... ....++
T Consensus 75 ~~l~~~~~~~~~~vv~Vs~D----~~~~~~~~~~~~~-~~f~~l~D~-~--~~~~~~~gv~~~~~~~g~~~~~~~p~~~l 146 (179)
T 3ixr_A 75 NLLLPQFEQINATVLGVSRD----SVKSHDSFCAKQG-FTFPLVSDS-D--AILCKAFDVIKEKTMYGRQVIGIERSTFL 146 (179)
T ss_dssp HHHHHHHHTTTEEEEEEESC----CHHHHHHHHHHHT-CCSCEEECT-T--CHHHHHTTCEEEECCC--CEEEECCEEEE
T ss_pred HHHHHHHHHCCCEEEEEcCC----CHHHHHHHHHHcC-CceEEEECC-c--hHHHHHcCCcccccccCcccCCcceEEEE
Confidence 33333333356888888543 3444556655553 334444432 2 1333334443221 244777
Q ss_pred EeCCCC
Q 026146 99 MDADLS 104 (242)
Q Consensus 99 lD~D~~ 104 (242)
+|.|..
T Consensus 147 ID~~G~ 152 (179)
T 3ixr_A 147 IGPTHR 152 (179)
T ss_dssp ECTTSB
T ss_pred ECCCCE
Confidence 777755
No 118
>3da8_A Probable 5'-phosphoribosylglycinamide formyltransferase PURN; glycinamide ribonucleotide transformylase, structure; 1.30A {Mycobacterium tuberculosis} PDB: 3dcj_A*
Probab=20.98 E-value=2.4e+02 Score=20.31 Aligned_cols=94 Identities=7% Similarity=0.003 Sum_probs=46.7
Q ss_pred EEEEEeCccccccHHHHHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcch---HHHHHHH
Q 026146 11 YSIIIPTYNERLNIALIVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGL---GTAYIHG 87 (242)
Q Consensus 11 isiiip~~n~~~~l~~~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~---~~a~n~g 87 (242)
.-|++-+-....+++.+++.+.. ..+.+|+.|-...+... .+.+.+++ ..+.....+....+ ..+.-..
T Consensus 13 ~ri~vl~SG~gsnl~all~~~~~---~~~~eI~~Vis~~~a~~----~~~A~~~g-Ip~~~~~~~~~~~r~~~d~~~~~~ 84 (215)
T 3da8_A 13 ARLVVLASGTGSLLRSLLDAAVG---DYPARVVAVGVDRECRA----AEIAAEAS-VPVFTVRLADHPSRDAWDVAITAA 84 (215)
T ss_dssp EEEEEEESSCCHHHHHHHHHSST---TCSEEEEEEEESSCCHH----HHHHHHTT-CCEEECCGGGSSSHHHHHHHHHHH
T ss_pred cEEEEEEeCChHHHHHHHHHHhc---cCCCeEEEEEeCCchHH----HHHHHHcC-CCEEEeCcccccchhhhhHHHHHH
Confidence 34444444556777777776633 13456655533232222 23334433 34444432211111 2334455
Q ss_pred HhhcCCCEEEEEeCCCCCCCCChHH
Q 026146 88 LKHASGSFVVIMDADLSHHPKYLPS 112 (242)
Q Consensus 88 ~~~a~~d~i~~lD~D~~~~~~~l~~ 112 (242)
++..+.|++++.----++++.+++.
T Consensus 85 l~~~~~Dlivlagy~~iL~~~~l~~ 109 (215)
T 3da8_A 85 TAAHEPDLVVSAGFMRILGPQFLSR 109 (215)
T ss_dssp HHTTCCSEEEEEECCSCCCHHHHHH
T ss_pred HHhhCCCEEEEcCchhhCCHHHHhh
Confidence 5566778888877666666655543
No 119
>3raz_A Thioredoxin-related protein; structural genomics, PSI-2, protein structure initiative; 2.00A {Neisseria meningitidis serogroup B}
Probab=20.72 E-value=1.3e+02 Score=19.45 Aligned_cols=71 Identities=6% Similarity=0.041 Sum_probs=35.1
Q ss_pred HHHHHHhhhcCCCeEEEEEeCCCCCChHHHHHHHHHHhCCCcEEEeeCCCCcchHHHHHHHHh--hcCCCEEEEEeCCCC
Q 026146 27 IVYLIFKHLRDVDFEIIVVDDGSPDGTQEVVKQLQQLYGEDRILLRPRPKKLGLGTAYIHGLK--HASGSFVVIMDADLS 104 (242)
Q Consensus 27 ~l~sl~~~~~~~~~eiivvd~~s~d~t~~~l~~~~~~~~~~~~~~~~~~~~~g~~~a~n~g~~--~a~~d~i~~lD~D~~ 104 (242)
.+..+.+......++++.|+-. +.+.++++.+.++. ...++.... +.....-..+. ....+.++++|.|..
T Consensus 45 ~l~~l~~~~~~~~v~vv~v~~d----~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~v~~~P~~~lid~~G~ 117 (151)
T 3raz_A 45 AMSKWYKAQKKGSVDMVGIALD----TSDNIGNFLKQTPV-SYPIWRYTG--ANSRNFMKTYGNTVGVLPFTVVEAPKCG 117 (151)
T ss_dssp HHHHHHHTSCTTTEEEEEEESS----CHHHHHHHHHHSCC-SSCEEEECC--SCHHHHHHTTTCCSCCSSEEEEEETTTT
T ss_pred HHHHHHHHhccCCeEEEEEECC----ChHHHHHHHHHcCC-CCceEecCc--cchHHHHHHhCCccCCCCEEEEECCCCc
Confidence 3444444433357888888763 23445666665542 222222221 12222222222 234577888888765
No 120
>2b7k_A SCO1 protein; metallochaperone, cytochrome C oxidase, metal binding protein; 1.80A {Saccharomyces cerevisiae} SCOP: c.47.1.10 PDB: 2b7j_A
Probab=20.54 E-value=2e+02 Score=19.86 Aligned_cols=28 Identities=7% Similarity=0.208 Sum_probs=19.4
Q ss_pred CCeEEEEEeCCCCCChHHHHHHHHHHhC
Q 026146 38 VDFEIIVVDDGSPDGTQEVVKQLQQLYG 65 (242)
Q Consensus 38 ~~~eiivvd~~s~d~t~~~l~~~~~~~~ 65 (242)
..++++.|.-....++.+.++++.+.++
T Consensus 77 ~~v~vv~Is~D~~~d~~~~~~~~~~~~~ 104 (200)
T 2b7k_A 77 ITLQPLFITCDPARDSPAVLKEYLSDFH 104 (200)
T ss_dssp CCCEEEEEESCTTTCCHHHHHHHHTTSC
T ss_pred CceEEEEEECCCCCCCHHHHHHHHHHcC
Confidence 3678888875554457777888877654
No 121
>1jql_B DNA polymerase III, delta subunit; processivity clamp, clamp loader, DNA replication, AAA+ ATPase, transferase; HET: DNA; 2.50A {Escherichia coli} SCOP: c.37.1.20
Probab=20.49 E-value=1.9e+02 Score=18.87 Aligned_cols=104 Identities=6% Similarity=0.043 Sum_probs=48.1
Q ss_pred EEeCccccccH-HHHHHHHHhhhcC---CCeEEEEEeCCCCCChHHHHHHHHHH--hCCCcEEEeeCCCC-cc--hHHHH
Q 026146 14 IIPTYNERLNI-ALIVYLIFKHLRD---VDFEIIVVDDGSPDGTQEVVKQLQQL--YGEDRILLRPRPKK-LG--LGTAY 84 (242)
Q Consensus 14 iip~~n~~~~l-~~~l~sl~~~~~~---~~~eiivvd~~s~d~t~~~l~~~~~~--~~~~~~~~~~~~~~-~g--~~~a~ 84 (242)
+...|+++..+ .+..+.+.+.... ...+++.+|. . .+..+++++...- +.+.++.+++.+.+ .| ...++
T Consensus 20 vyll~G~E~~l~~~~~~~i~~~~~~~~~~e~~~~~~~~-~-~~~~~l~~~~~s~slF~~rrlV~v~~~~~~~~~~~~~~L 97 (140)
T 1jql_B 20 AYLLLGNDPLLLQESQDAVRQVAAAQGFEEHHTFSIDP-N-TDWNAIFSLCQAMSLFASRQTLLLLLPENGPNAAINEQL 97 (140)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHHHHTTCCEEECCCCST-T-CCHHHHHHHHHCCCTTCCCEEEEEECCTTCSCTTHHHHH
T ss_pred eEEEEcCcHHHHHHHHHHHHHHHHHCCCcceeEEEecC-C-CCHHHHHHHHhcCCCCCCCEEEEEECCCCCCChHHHHHH
Confidence 45556766544 3555555443321 2334455444 2 3334444433221 23456888876543 23 33445
Q ss_pred HHHHhhcCCCEEEEEeCCCCCCCCChHHHHHHHHh
Q 026146 85 IHGLKHASGSFVVIMDADLSHHPKYLPSFIKKQLE 119 (242)
Q Consensus 85 n~g~~~a~~d~i~~lD~D~~~~~~~l~~l~~~~~~ 119 (242)
..-++....+.++++-....-...-..++.+.+++
T Consensus 98 ~~yl~~p~~~~~lvi~~~kld~~~~~~k~~k~l~k 132 (140)
T 1jql_B 98 LTLTGLLHDDLLLIVRGNKLSKAQENAAWFTALAN 132 (140)
T ss_dssp HHHHHHCCSSCCEEEECSSCCTTGGGSHHHHHHGG
T ss_pred HHHHhcCCCCEEEEEEeCCcChhHHhhHHHHHHHh
Confidence 55555544444444443222222224566666654
No 122
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=20.25 E-value=2.4e+02 Score=22.22 Aligned_cols=9 Identities=22% Similarity=0.460 Sum_probs=4.4
Q ss_pred EEEEEeCCC
Q 026146 41 EIIVVDDGS 49 (242)
Q Consensus 41 eiivvd~~s 49 (242)
.++||-|.+
T Consensus 35 ~~livtd~~ 43 (387)
T 3bfj_A 35 KALLVTDKG 43 (387)
T ss_dssp EEEEECCTT
T ss_pred EEEEEECcc
Confidence 455554443
Done!