Query 026150
Match_columns 242
No_of_seqs 148 out of 242
Neff 6.6
Searched_HMMs 13730
Date Mon Mar 25 06:45:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026150.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026150hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2axtt1 f.23.34.1 (T:1-30) Pho 8.8 1.4E+02 0.01 15.3 2.9 7 1-7 1-7 (30)
2 d1tbxa_ a.4.5.48 (A:) Hypothet 5.6 27 0.0019 22.8 -1.9 16 225-240 49-64 (94)
3 d1nkzb_ f.3.1.1 (B:) Light-har 4.6 1.1E+02 0.0083 17.2 0.8 20 121-141 22-41 (41)
4 d1v54l_ f.23.6.1 (L:) Mitochon 4.5 3.1E+02 0.023 15.6 2.7 21 124-144 21-41 (46)
5 d1zela1 a.4.5.83 (A:1-82) Hypo 4.3 2E+02 0.015 17.8 1.9 14 31-44 9-22 (82)
6 d1z3aa1 c.97.1.2 (A:13-168) tR 3.5 2E+02 0.015 20.1 1.5 13 224-236 142-154 (156)
7 d1js8a1 a.86.1.1 (A:2503-2791) 2.9 2E+02 0.015 22.2 1.1 15 95-109 190-204 (289)
8 d1or7a2 a.177.1.1 (A:-1-111) S 2.7 2.9E+02 0.021 17.5 1.7 10 221-230 75-84 (113)
9 d1eiga_ d.9.1.1 (A:) Eotaxin-2 2.6 4.2E+02 0.03 15.9 2.3 14 218-231 52-65 (73)
10 d1rp4a_ a.227.1.1 (A:) Endopla 2.6 3.7E+02 0.027 22.1 2.4 19 38-56 171-189 (374)
No 1
>d2axtt1 f.23.34.1 (T:1-30) Photosystem II reaction center protein T, PsbT {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=8.85 E-value=1.4e+02 Score=15.27 Aligned_cols=7 Identities=29% Similarity=0.577 Sum_probs=3.8
Q ss_pred CchhhHH
Q 026150 1 MEPQFFI 7 (242)
Q Consensus 1 ~~~~~~~ 7 (242)
||++...
T Consensus 1 me~i~yv 7 (30)
T d2axtt1 1 METITYV 7 (30)
T ss_dssp CHHHHHH
T ss_pred CceeehH
Confidence 5666533
No 2
>d1tbxa_ a.4.5.48 (A:) Hypothetical protein F93 {Sulfolobus virus-like particle SSV1 [TaxId: 244589]}
Probab=5.56 E-value=27 Score=22.85 Aligned_cols=16 Identities=19% Similarity=0.127 Sum_probs=11.2
Q ss_pred HHHHHHhhhccccccc
Q 026150 225 LWIQLFRERRGLFYKK 240 (242)
Q Consensus 225 i~~g~~k~~~~~~~~k 240 (242)
|.-|.++||..+.+||
T Consensus 49 iqegfi~e~qe~gek~ 64 (94)
T d1tbxa_ 49 IQEGFVKERQERGEKR 64 (94)
T ss_dssp HHTTSEEEEEETTEEE
T ss_pred HHHHhHHHHHhcCcee
Confidence 4456667888887776
No 3
>d1nkzb_ f.3.1.1 (B:) Light-harvesting complex subunits {Purple bacterium (Rhodoblastus acidophilus) [TaxId: 1074]}
Probab=4.63 E-value=1.1e+02 Score=17.19 Aligned_cols=20 Identities=20% Similarity=0.117 Sum_probs=13.4
Q ss_pred chhHHHHHHHHHhhhchhhHH
Q 026150 121 HGAYALLSLLILAEVTSACQN 141 (242)
Q Consensus 121 ~g~~~~~~l~~l~Evsspfln 141 (242)
+|+.++++. +++-+.||.+|
T Consensus 22 F~~iA~~AH-~La~~~tPWLh 41 (41)
T d1nkzb_ 22 FLGLALVAH-FLAFSATPWLH 41 (41)
T ss_dssp HHHHHHHHH-HHHHHHSSTTC
T ss_pred HHHHHHHHH-HHHHHhCcccC
Confidence 466666665 77777777654
No 4
>d1v54l_ f.23.6.1 (L:) Mitochondrial cytochrome c oxidase subunit VIIc (aka VIIIa) {Cow (Bos taurus) [TaxId: 9913]}
Probab=4.51 E-value=3.1e+02 Score=15.63 Aligned_cols=21 Identities=10% Similarity=0.105 Sum_probs=13.6
Q ss_pred HHHHHHHHHhhhchhhHHHHH
Q 026150 124 YALLSLLILAEVTSACQNAWT 144 (242)
Q Consensus 124 ~~~~~l~~l~Evsspfln~R~ 144 (242)
.+.+++.+.+-...||+-.|.
T Consensus 21 la~m~~~fGsgfa~PF~ivRh 41 (46)
T d1v54l_ 21 LAMMTLFFGSGFAAPFFIVRH 41 (46)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccccchHHHHHH
Confidence 344444566667778888884
No 5
>d1zela1 a.4.5.83 (A:1-82) Hypothetical protein Rv2827c {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=4.31 E-value=2e+02 Score=17.80 Aligned_cols=14 Identities=21% Similarity=0.180 Sum_probs=10.4
Q ss_pred CCcccchhHHHHHh
Q 026150 31 KIRPEASSCLISIF 44 (242)
Q Consensus 31 ~~~~ew~nr~vS~~ 44 (242)
++-+.|.||++|-+
T Consensus 9 rriptwasrvvsgl 22 (82)
T d1zela1 9 RRIPTWASRVVSGL 22 (82)
T ss_dssp CCCCGGGHHHHHHH
T ss_pred cccchHHHHHHhhh
Confidence 35578999998854
No 6
>d1z3aa1 c.97.1.2 (A:13-168) tRNA adenosine deaminase TadA {Escherichia coli [TaxId: 562]}
Probab=3.46 E-value=2e+02 Score=20.07 Aligned_cols=13 Identities=38% Similarity=0.498 Sum_probs=7.8
Q ss_pred HHHHHHHhhhccc
Q 026150 224 NLWIQLFRERRGL 236 (242)
Q Consensus 224 ki~~g~~k~~~~~ 236 (242)
++.++.++++|+|
T Consensus 142 ~ll~~Ff~~~r~~ 154 (156)
T d1z3aa1 142 ALLSDFFRMRRQE 154 (156)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhC
Confidence 4557777755544
No 7
>d1js8a1 a.86.1.1 (A:2503-2791) Mollusc hemocyanin {Giant octopus (Octopus dofleini) [TaxId: 267067]}
Probab=2.86 E-value=2e+02 Score=22.20 Aligned_cols=15 Identities=40% Similarity=0.319 Sum_probs=11.8
Q ss_pred cCCCchhHHHHHHHH
Q 026150 95 FPGDVLFIAHHLATL 109 (242)
Q Consensus 95 ~~~d~~~~~HH~~~i 109 (242)
.+.|..|.+||.-.=
T Consensus 190 S~~DPiF~lHHaniD 204 (289)
T d1js8a1 190 TSYDPLFYLHHSNTD 204 (289)
T ss_dssp GGGSTHHHHHHHHHH
T ss_pred CcccHHHHHHHHHHH
Confidence 467899999997553
No 8
>d1or7a2 a.177.1.1 (A:-1-111) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=2.70 E-value=2.9e+02 Score=17.45 Aligned_cols=10 Identities=10% Similarity=0.461 Sum_probs=5.1
Q ss_pred HHHHHHHHHH
Q 026150 221 WVSNLWIQLF 230 (242)
Q Consensus 221 Wf~ki~~g~~ 230 (242)
|+++|.|-..
T Consensus 75 wl~~I~~n~~ 84 (113)
T d1or7a2 75 WLYRIAVNTA 84 (113)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555444
No 9
>d1eiga_ d.9.1.1 (A:) Eotaxin-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.62 E-value=4.2e+02 Score=15.90 Aligned_cols=14 Identities=21% Similarity=0.240 Sum_probs=10.2
Q ss_pred HHHHHHHHHHHHHh
Q 026150 218 SILWVSNLWIQLFR 231 (242)
Q Consensus 218 ni~Wf~ki~~g~~k 231 (242)
+.-|+-++.+.+-+
T Consensus 52 ~~~WVk~~i~~L~~ 65 (73)
T d1eiga_ 52 KQEWVQRYMKNLDA 65 (73)
T ss_dssp TSHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHH
Confidence 34788888887654
No 10
>d1rp4a_ a.227.1.1 (A:) Endoplasmic oxidoreductin 1, Ero1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=2.57 E-value=3.7e+02 Score=22.07 Aligned_cols=19 Identities=26% Similarity=0.211 Sum_probs=15.5
Q ss_pred hHHHHHhhHHHHHHHHHHH
Q 026150 38 SCLISIFHGTPAVVLATYA 56 (242)
Q Consensus 38 nr~vS~~Ha~v~~~~aly~ 56 (242)
.|+||-+||.+++=+|-..
T Consensus 171 yrlISGlHsSIs~Hl~~~y 189 (374)
T d1rp4a_ 171 YRLVSGFHASIGTHLSKEY 189 (374)
T ss_dssp HHHHHHHHHHHHHHHHHSE
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 4899999999998776544
Done!