Query 026155
Match_columns 242
No_of_seqs 125 out of 1178
Neff 7.5
Searched_HMMs 46136
Date Fri Mar 29 04:25:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026155.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026155hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK10447 HflBKC-binding inner 100.0 2.1E-42 4.6E-47 293.7 26.6 204 22-241 10-217 (219)
2 KOG2322 N-methyl-D-aspartate r 100.0 3.2E-43 7E-48 295.6 17.2 201 22-225 37-237 (237)
3 cd06181 BI-1-like BAX inhibito 100.0 6.9E-40 1.5E-44 278.6 27.8 204 29-240 2-212 (212)
4 COG0670 Integral membrane prot 100.0 3.9E-37 8.5E-42 264.1 26.9 206 25-238 16-227 (233)
5 PF01027 Bax1-I: Inhibitor of 100.0 3.6E-34 7.7E-39 241.4 25.2 197 31-237 2-205 (205)
6 KOG1629 Bax-mediated apoptosis 100.0 2.3E-28 5E-33 199.8 18.8 199 24-239 19-222 (235)
7 KOG1630 Growth hormone-induced 99.9 3.4E-21 7.3E-26 163.3 14.9 210 22-241 105-333 (336)
8 PF12811 BaxI_1: Bax inhibitor 99.7 6.3E-15 1.4E-19 128.7 23.9 164 74-242 91-273 (274)
9 COG4760 Predicted membrane pro 99.2 4.3E-09 9.2E-14 87.7 17.9 163 73-242 86-275 (276)
10 PF09925 DUF2157: Predicted me 67.8 58 0.0013 25.6 13.9 85 31-121 30-114 (145)
11 PF05684 DUF819: Protein of un 61.1 1.1E+02 0.0024 28.4 10.5 25 34-58 206-230 (378)
12 PF05884 ZYG-11_interact: Inte 55.4 1.6E+02 0.0034 26.5 23.0 86 32-119 101-187 (299)
13 KOG3488 Dolichol phosphate-man 51.4 83 0.0018 22.1 7.1 55 185-239 10-76 (81)
14 PF07886 BA14K: BA14K-like pro 38.2 9.7 0.00021 22.3 -0.2 15 3-17 7-21 (31)
15 KOG3103 Rab GTPase interacting 37.8 2E+02 0.0043 25.1 7.6 57 123-183 143-199 (249)
16 PF03242 LEA_3: Late embryogen 27.4 43 0.00093 24.8 1.7 24 10-33 67-92 (93)
17 PF14362 DUF4407: Domain of un 26.0 4.6E+02 0.0099 23.1 11.4 15 103-117 87-101 (301)
18 PF11317 DUF3119: Protein of u 23.8 88 0.0019 24.1 2.9 21 190-210 31-51 (116)
19 PRK10245 adrA diguanylate cycl 22.7 5.8E+02 0.013 23.2 17.8 24 31-54 31-54 (366)
20 TIGR02865 spore_II_E stage II 22.4 8.4E+02 0.018 24.9 12.7 12 189-200 219-230 (764)
21 COG1030 NfeD Membrane-bound se 22.1 6.3E+02 0.014 24.1 8.7 19 187-205 309-327 (436)
22 PF14800 DUF4481: Domain of un 22.1 1.2E+02 0.0026 27.3 3.8 13 2-16 15-27 (308)
23 COG4393 Predicted membrane pro 21.5 6.5E+02 0.014 23.3 14.9 73 34-114 29-101 (405)
24 COG4956 Integral membrane prot 20.8 6.5E+02 0.014 23.0 11.8 26 93-118 74-99 (356)
No 1
>PRK10447 HflBKC-binding inner membrane protein; Provisional
Probab=100.00 E-value=2.1e-42 Score=293.74 Aligned_cols=204 Identities=23% Similarity=0.324 Sum_probs=177.0
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhCchhHHHHHHHHHHHHHHHHHHhhhcccchhHHHH
Q 026155 22 MSESPQLRWAFIRKIYSIIAIQLLATIAVASVVVSVRPISHFFSSTGAGLALYIVLIITPFIVLCPLYYYYQKHPVNYLL 101 (242)
Q Consensus 22 ~~~~~~~r~~fl~kvy~~l~~~ll~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~p~n~~~ 101 (242)
+.++...+++|+||||++++.+++.+++++++....+. |.. ..++.+++++++++... ++||+|.|+++
T Consensus 10 ~~~~~~~~~~~Lr~vY~lLa~tl~~aa~ga~v~~~~~~--------~~~--~~~~~~~~~~gl~~~~~-~~~~~~~~~~l 78 (219)
T PRK10447 10 DRTSLLSTHKVLRNTYFLLSLTLAFSAITATASTVLML--------PSP--GLILTLVGMYGLMFLTY-KTANKPTGILS 78 (219)
T ss_pred chHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcc--------chh--HHHHHHHHHHHHHHHHH-HHHcCCHHHHH
Confidence 34444568899999999999999999999998764211 110 22344566777666543 45789999999
Q ss_pred HHHHHHHHHHHHHHHHhhc----cchhHHHHHHHHHHHHHHHHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHh
Q 026155 102 LGVFTIALSFAVGLTCAYT----KGEVILESAILTAVVVISLTLYTFWAARRGHDFNFLGPFLFGAVMVLLVFAFIQILF 177 (242)
Q Consensus 102 l~~ft~~~g~~l~~~~~~~----~~~~i~~A~~~T~~if~~l~l~a~~a~~tk~d~~~~~~~l~~~l~~liv~~l~~~f~ 177 (242)
+..||.++|+++||++..+ +|++|.+|+++|+++|++++++++ +||+|++++|++++++++++++++++++|+
T Consensus 79 lf~fT~~~G~~lg~i~~~y~~~~~~~iV~~A~~~Ta~iF~~ls~~a~---~tk~Dfs~lg~~L~~~l~~li~~~l~~~F~ 155 (219)
T PRK10447 79 AFAFTGFLGYILGPILNTYLSAGMGDVIALALGGTALVFFCCSAYVL---TTRKDMSFLGGMLMAGIVVVLIGMVANIFL 155 (219)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999865 479999999999999999999999 999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 026155 178 PLGRISVMIYGGLASIIFCGYIIYDTDNLIKRYSYDEYIWAAVALYLDIINLFLSLLTIFRAAD 241 (242)
Q Consensus 178 ~~~~~~~~i~~~~g~~lf~~~l~~Dtq~i~~~~~~~dyi~~Al~LylDiinlFl~iL~il~~~~ 241 (242)
+ ++..+.+++++|+++||+|++||||+|+|+ ++|||+.||++||+|++|+|+++||++|++|
T Consensus 156 ~-s~~~~~~~s~~g~llfsgyilyDTq~Ii~~-g~~dyi~aAl~LYlDiinlFl~lL~il~~~~ 217 (219)
T PRK10447 156 Q-LPALHLAISAVFILISSGAILFETSNIIHG-GETNYIRATVSLYVSLYNIFVSLLSILGFAS 217 (219)
T ss_pred c-cHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CchHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 7 567899999999999999999999999975 6899999999999999999999999999765
No 2
>KOG2322 consensus N-methyl-D-aspartate receptor glutamate-binding subunit [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-43 Score=295.65 Aligned_cols=201 Identities=44% Similarity=0.769 Sum_probs=182.1
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhCchhHHHHHHHHHHHHHHHHHHhhhcccchhHHHH
Q 026155 22 MSESPQLRWAFIRKIYSIIAIQLLATIAVASVVVSVRPISHFFSSTGAGLALYIVLIITPFIVLCPLYYYYQKHPVNYLL 101 (242)
Q Consensus 22 ~~~~~~~r~~fl~kvy~~l~~~ll~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~p~n~~~ 101 (242)
.++|+.+|+.|+||||++++.|+++|.+++......++.++|+.+|+|..|..++..+++...+.++...|||+|.|+++
T Consensus 37 ~~~~~~iR~~FiRKVYsIl~~QLl~T~~~~~~~~~~~~~~~~v~~~~~~~~~~~~vf~vt~l~l~c~~~~r~k~P~N~il 116 (237)
T KOG2322|consen 37 AFCDQSIRWGFIRKVYSILSIQLLITLAVVAIFTVHEPVQDFVRRNPALYWALIVVFIVTYLSLACCEGLRRKSPVNLIL 116 (237)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHheeEEEEccHHHHHHHhCcHHHHHHHHHHHHHHHHHHccCcccccCcHHHhH
Confidence 47889999999999999999999999999999999999999999999844444444444444445555678999999999
Q ss_pred HHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHhCchh
Q 026155 102 LGVFTIALSFAVGLTCAYTKGEVILESAILTAVVVISLTLYTFWAARRGHDFNFLGPFLFGAVMVLLVFAFIQILFPLGR 181 (242)
Q Consensus 102 l~~ft~~~g~~l~~~~~~~~~~~i~~A~~~T~~if~~l~l~a~~a~~tk~d~~~~~~~l~~~l~~liv~~l~~~f~~~~~ 181 (242)
+.+||.+++++.|..++++++.+|++|+.+|+++++++++|++ ++|+|++..++.+++.+++++++|++..+++.++
T Consensus 117 L~iFT~a~s~~~g~~~a~~~~~~VL~Al~IT~~V~~slt~~t~---qtK~DFt~~~~~l~~~l~vl~~~g~I~~~f~~~~ 193 (237)
T KOG2322|consen 117 LGIFTLAEAFMTGLVTAFYDAKVVLLALIITTVVVLSLTLFTL---QTKYDFTSLGGFLFALLIVLLLFGLIFLFFPYGP 193 (237)
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhheeeEEEEEE---eeccchhhhhhHHHHHHHHHHHHHHHHHHHhhHH
Confidence 9999999999999999999999999999999999999999999 9999999999999999999999996666666678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHH
Q 026155 182 ISVMIYGGLASIIFCGYIIYDTDNLIKRYSYDEYIWAAVALYLD 225 (242)
Q Consensus 182 ~~~~i~~~~g~~lf~~~l~~Dtq~i~~~~~~~dyi~~Al~LylD 225 (242)
+++.+++.+|+++|++|++||||.+.++.+|||||.||+++|+|
T Consensus 194 ~~~~vya~lgAllf~~yl~~Dtqllm~~~SPEEYI~aA~~lYlD 237 (237)
T KOG2322|consen 194 ILVMVYAALGALLFCGYLVYDTQLLMGRISPEEYIFAALNLYLD 237 (237)
T ss_pred HHHHHHHHHHHHHHhHHHHhhhHHHhccCCHHHHHHHHHHhhcC
Confidence 89999999999999999999999999999999999999999998
No 3
>cd06181 BI-1-like BAX inhibitor (BI)-1 like protein family. Mammalian members of this family of small transmembrane proteins have been shown to have an antiapoptotic effect either by stimulating the antiapoptotic function of Bcl-2, a well characterized oncogene, or inhibiting the proapoptotic effect of Bax, another member of the Bcl-2 family. Their broad tissue distribution and high degree of conservation suggests an important regulatory role. In plants, BI-1 like proteins play a role in pathogen resistance. A prokaryotic member, E.coli YccA, has been shown to interact with ATP-dependent protease FtsH, which degrades abnormal membrane proteins as part of a quality control mechanism to keep the integrity of biological membranes.
Probab=100.00 E-value=6.9e-40 Score=278.61 Aligned_cols=204 Identities=36% Similarity=0.569 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhCchhHHHHHHHHHHHHHH---HHHHhhhcccchhHHHHHHHH
Q 026155 29 RWAFIRKIYSIIAIQLLATIAVASVVVSVRPISHFFSSTGAGLALYIVLIITPFIV---LCPLYYYYQKHPVNYLLLGVF 105 (242)
Q Consensus 29 r~~fl~kvy~~l~~~ll~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~---~~~~~~~~~~~p~n~~~l~~f 105 (242)
|++|+||||++++.|+++|++++++....++.++ ..+++| ..++..++++++ +.+.+..+||+|.|++++.+|
T Consensus 2 ~~~fl~kVY~~l~~~l~~t~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~ll~~f 77 (212)
T cd06181 2 RRGFLRKVYGLLALQLLVTALVAYLGMFSPPLRN-VLSNTP---LGWLLLLAFLGLVILLFCCRIKRRSSPANLILLFLF 77 (212)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH-HHhccH---HHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 7899999999999999999999999998888766 455665 333334444333 333355678899999999999
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHhCchhHHHH
Q 026155 106 TIALSFAVGLTCAYTKGEVILESAILTAVVVISLTLYTFWAARRGHDFNFLGPFLFGAVMVLLVFAFIQILFPLGRISVM 185 (242)
Q Consensus 106 t~~~g~~l~~~~~~~~~~~i~~A~~~T~~if~~l~l~a~~a~~tk~d~~~~~~~l~~~l~~liv~~l~~~f~~~~~~~~~ 185 (242)
|+.+|+++++++..++++.+.+|+..|+++|++++++++ ++|+|++++|+++++++.++++.+++++|++ ++..+.
T Consensus 78 t~~~g~~l~~~~~~~~~~~i~~A~~~T~~if~~l~l~a~---~tk~d~~~~g~~l~~~~~~l~~~~l~~~f~~-~~~~~~ 153 (212)
T cd06181 78 TALMGVTLGPILSVYTAASVLQAFGITAAVFGGLSLYAL---TTKRDFSFLGGFLFMGLIVLIVASLVNIFLQ-SPALQL 153 (212)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH---hccccHHhHHHHHHHHHHHHHHHHHHHHHHh-cHHHHH
Confidence 999999999999999999999999999999999999999 9999999999999999999999999999987 567789
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcC----CccHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 026155 186 IYGGLASIIFCGYIIYDTDNLIKRY----SYDEYIWAAVALYLDIINLFLSLLTIFRAA 240 (242)
Q Consensus 186 i~~~~g~~lf~~~l~~Dtq~i~~~~----~~~dyi~~Al~LylDiinlFl~iL~il~~~ 240 (242)
+++++|+++|++|++||||+++++. ++|||+.||++||+|++|+|+++||++|++
T Consensus 154 ~~~~~g~~lf~~~l~~Dtq~i~~~~~~~~~~~d~i~~al~LylDiinlF~~iL~il~~~ 212 (212)
T cd06181 154 AISALGVLLFSGYILYDTQLIIGGYRLYLSPDDYILAALSLYLDIINLFLSLLRILGSR 212 (212)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhccCcchHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999998754 489999999999999999999999999875
No 4
>COG0670 Integral membrane protein, interacts with FtsH [General function prediction only]
Probab=100.00 E-value=3.9e-37 Score=264.14 Aligned_cols=206 Identities=29% Similarity=0.379 Sum_probs=179.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhCchhHHHHHHHHHHHHHHHHHHhhh-cccchhHHHHHH
Q 026155 25 SPQLRWAFIRKIYSIIAIQLLATIAVASVVVSVRPISHFFSSTGAGLALYIVLIITPFIVLCPLYYY-YQKHPVNYLLLG 103 (242)
Q Consensus 25 ~~~~r~~fl~kvy~~l~~~ll~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~-~~~~p~n~~~l~ 103 (242)
+++.|++|++|||.+++.++++|+.+++...+.++..... .+++ ..++..++.+..++..+.+ ++++|.+.+.+.
T Consensus 16 ~~~~~~~f~~~vY~~~~~~L~~t~~~a~~~~~~~~~~~~~-~~~~---~~~vl~~a~l~~~~~~~~~~~~s~~~~~~~~~ 91 (233)
T COG0670 16 SDLGLNTFLRKVYLLLALGLLVTAVGAALAAYLLFNLGLL-SLSP---PGFVLIIAGLAGVFFLSRKINKSSPTALILFF 91 (233)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-cccc---HHHHHHHHHHHHHHHHHHHhccCcchHHHHHH
Confidence 3567789999999999999999999999877765544321 3343 4566677777777766543 357899999999
Q ss_pred HHHHHHHHHHHHHHhhccc----hhHHHHHHHHHHHHHHHHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHhCc
Q 026155 104 VFTIALSFAVGLTCAYTKG----EVILESAILTAVVVISLTLYTFWAARRGHDFNFLGPFLFGAVMVLLVFAFIQILFPL 179 (242)
Q Consensus 104 ~ft~~~g~~l~~~~~~~~~----~~i~~A~~~T~~if~~l~l~a~~a~~tk~d~~~~~~~l~~~l~~liv~~l~~~f~~~ 179 (242)
.||..+|++++++...|.+ .++.+|+..|+++|++++++++ ++|+|++.+++.++++++++++++++|+|+++
T Consensus 92 ~~t~l~G~tL~~i~~~Y~~~~~~~~i~~af~~t~~~F~~ls~~g~---~tk~Dls~l~~~l~~aligLiiasvvn~Fl~s 168 (233)
T COG0670 92 VYTALVGLTLSPILLVYAAISGGDAIAAAFGITALVFGALSLYGY---TTKRDLSSLGSFLFMALIGLIIASLVNIFLGS 168 (233)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHH---HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999999999999887754 4499999999999999999999 99999999999999999999999999999984
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhhc-CCccHHHHHHHHHHHHHHHHHHHHHHHHh
Q 026155 180 GRISVMIYGGLASIIFCGYIIYDTDNLIKR-YSYDEYIWAAVALYLDIINLFLSLLTIFR 238 (242)
Q Consensus 180 ~~~~~~i~~~~g~~lf~~~l~~Dtq~i~~~-~~~~dyi~~Al~LylDiinlFl~iL~il~ 238 (242)
+.++.++|++|+++|+++++||||+|+|+ .++++++.+|++||+|++|+|+++||++|
T Consensus 169 -~~l~~~IS~lgvlifsgli~yDtq~I~~~~~~~~~~i~~AlsLYldfiNlF~~LL~i~g 227 (233)
T COG0670 169 -SALHLAISVLGVLIFSGLIAYDTQNIKRMEGGERLAIMGALSLYLDFINLFLSLLRILG 227 (233)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56789999999999999999999999984 67899999999999999999999999999
No 5
>PF01027 Bax1-I: Inhibitor of apoptosis-promoting Bax1; InterPro: IPR006214 Programmed cell-death involves a set of Bcl-2 family proteins, some of which inhibit apoptosis (Bcl-2 and Bcl-XL) and some of which promote it (Bax and Bak) []. Human Bax inhibitor, BI-1, is an evolutionarily conserved integral membrane protein containing multiple membrane-spanning segments predominantly localised to intracellular membranes. It has 6-7 membrane-spanning domains. The C termini of the mammalian BI-1 proteins are comprised of basic amino acids resembling some nuclear targeting sequences, but otherwise the predicted proteins lack motifs that suggest a function. As plant BI-1 appears to localise predominantly to the ER, we hypothesized that plant BI-1 could also regulate cell death triggered by ER stress []. BI-1 appears to exert its effect through an interaction with calmodulin [].
Probab=100.00 E-value=3.6e-34 Score=241.40 Aligned_cols=197 Identities=34% Similarity=0.606 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhCchhHHHHHHHHHHHHHHH-H--HHhhhcccchhH--HHHHHHH
Q 026155 31 AFIRKIYSIIAIQLLATIAVASVVVSVRPISHFFSSTGAGLALYIVLIITPFIVL-C--PLYYYYQKHPVN--YLLLGVF 105 (242)
Q Consensus 31 ~fl~kvy~~l~~~ll~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~-~--~~~~~~~~~p~n--~~~l~~f 105 (242)
+|+||||++++.|+.+|+++++.....| .+...+++ ..++..+++++.. + ....++|++|.| +..+..|
T Consensus 2 ~fl~kvy~~l~~~l~it~~~~~~~~~~~---~~~~~~~~---~~~~~~i~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 75 (205)
T PF01027_consen 2 QFLRKVYGLLALQLAITALGAFLVLASP---LFLSQHFP---LSWVSLIVSLVLLIFLYILFNRRRRFPSNVALILLFIF 75 (205)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhH---HHHHhccH---HHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHH
Confidence 7999999999999999988888877666 33444554 4445555555544 2 233344455555 9999999
Q ss_pred HHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHhCchhHHHH
Q 026155 106 TIALSFAVGLTCAYTKGEVILESAILTAVVVISLTLYTFWAARRGHDFNFLGPFLFGAVMVLLVFAFIQILFPLGRISVM 185 (242)
Q Consensus 106 t~~~g~~l~~~~~~~~~~~i~~A~~~T~~if~~l~l~a~~a~~tk~d~~~~~~~l~~~l~~liv~~l~~~f~~~~~~~~~ 185 (242)
|..+|..+++++.+++++++.+|+..|+++|++++++++ ++|+|++++++.+..++.++++++++++|++ ++..+.
T Consensus 76 t~~~g~~~~~i~~~~~~~~v~~a~~~T~~if~~l~~~a~---~~~~d~~~~~~~l~~~l~~l~i~~l~~~f~~-~~~~~~ 151 (205)
T PF01027_consen 76 TLLEGLLLGPISSFYDPSIVLQAFLLTAAIFIALTLYAF---FTKRDFTRWGGILFIGLIGLIIFGLVSIFLP-SSPLYL 151 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhhhcccchHHHHHHHHHHHHHHHHHHhc-chHHHH
Confidence 999999999999999999999999999999999999999 9999999999999999999999999999987 556778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh-cCCccHH-HHHHHHHHHHHHHHHHHHHHHH
Q 026155 186 IYGGLASIIFCGYIIYDTDNLIK-RYSYDEY-IWAAVALYLDIINLFLSLLTIF 237 (242)
Q Consensus 186 i~~~~g~~lf~~~l~~Dtq~i~~-~~~~~dy-i~~Al~LylDiinlFl~iL~il 237 (242)
+++++|+++|+++++||||+++| +.++||+ +.+|++||+|++|+|+++||++
T Consensus 152 ~is~~~~~lf~~~l~~Dt~~i~~~~~~~~~~~i~~Al~Ly~d~i~lF~~iL~ll 205 (205)
T PF01027_consen 152 LISYIGILLFSLYLVYDTQRIIRRYFSPDDYAIIAALSLYLDIINLFLRILRLL 205 (205)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 88999999999999999999986 4567887 9999999999999999999985
No 6
>KOG1629 consensus Bax-mediated apoptosis inhibitor TEGT/BI-1 [Defense mechanisms]
Probab=99.96 E-value=2.3e-28 Score=199.79 Aligned_cols=199 Identities=20% Similarity=0.332 Sum_probs=171.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhCchhHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHH
Q 026155 24 ESPQLRWAFIRKIYSIIAIQLLATIAVASVVVSVRPISHFFSSTGAGLALYIVLIITPFIVLCPLYYYYQKHPVNYLLLG 103 (242)
Q Consensus 24 ~~~~~r~~fl~kvy~~l~~~ll~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~p~n~~~l~ 103 (242)
-+|++| +|++|||..++..+..++.++++-+.. |- .-.++.+++++++..+.+.+.++..++-++.
T Consensus 19 ~sP~vq-~HLkkvY~tl~~~~~asA~GAylhM~~---------ni----gG~lsalg~l~~miwl~~~py~hk~rl~lL~ 84 (235)
T KOG1629|consen 19 ISPAVQ-NHLKKVYLTLALALFASAAGAYLHMVW---------NI----GGLLSALGSLGLMIWLMFTPYEHKTRLGLLF 84 (235)
T ss_pred CCHHHH-HHHHHHHHHHHHHHHHHHhhhHHHhhh---------hc----cchHHHHHHHHHHHHHhCCCCccchhHHHHH
Confidence 478898 799999999999999999998875422 21 2235667777888877777666666899999
Q ss_pred HHHHHHHHHHHHHHhh---ccchhHHHHHHHHHHHHHHHHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHhCch
Q 026155 104 VFTIALSFAVGLTCAY---TKGEVILESAILTAVVVISLTLYTFWAARRGHDFNFLGPFLFGAVMVLLVFAFIQILFPLG 180 (242)
Q Consensus 104 ~ft~~~g~~l~~~~~~---~~~~~i~~A~~~T~~if~~l~l~a~~a~~tk~d~~~~~~~l~~~l~~liv~~l~~~f~~~~ 180 (242)
+|+++.|..+||.+.+ .||+++..|+.+|+++|.|+++.|.+|++ |++.++|+.+..++..+...++.|.||+ |
T Consensus 85 ~fa~l~GasvGP~i~~~ididpsIliTAf~GTav~F~cfSasAmlArr--reYLylGg~L~s~~s~l~wl~l~n~~fg-S 161 (235)
T KOG1629|consen 85 LFAFLTGASVGPLIKFCIDIDPSILITAFVGTAVIFVCFSASAMLARR--REYLYLGGLLSSGLSLLLWLSLANSFFG-S 161 (235)
T ss_pred HHHHHcCCcccchhhheeccChHHHHHHHHhhHHHHHHHHHHHHHHhh--hhhhhhhHHHHHHHHHHHHHHHHHHHhh-H
Confidence 9999999999998754 58999999999999999999999987655 5669999999999999999999999998 6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--CccHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 026155 181 RISVMIYGGLASIIFCGYIIYDTDNLIKRY--SYDEYIWAAVALYLDIINLFLSLLTIFRA 239 (242)
Q Consensus 181 ~~~~~i~~~~g~~lf~~~l~~Dtq~i~~~~--~~~dyi~~Al~LylDiinlFl~iL~il~~ 239 (242)
.+..-.--|+|+++|++|+++|||.|+++. ++.||+.||+.+|.|++.+|.+||.|+-.
T Consensus 162 ~~v~~~qLY~Gllvfvg~ivvdTQ~IiEKah~GdmDyv~Hsl~lf~dfvsvF~riLiIl~~ 222 (235)
T KOG1629|consen 162 IWVFKFQLYVGLLVFVGFIVVDTQEIIEKAHHGDMDYVQHSLDLFTDFVSVFRRILIILAM 222 (235)
T ss_pred HHHHHHHHHHHHHHhheeEEeeHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 666666678999999999999999999753 68999999999999999999999999875
No 7
>KOG1630 consensus Growth hormone-induced protein and related proteins [Signal transduction mechanisms]
Probab=99.87 E-value=3.4e-21 Score=163.31 Aligned_cols=210 Identities=20% Similarity=0.213 Sum_probs=170.5
Q ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhCchhHHHHHHHHHHHHHHHHHHhhhc------ccc
Q 026155 22 MSESPQLRWAFIRKIYSIIAIQLLATIAVASVVVSVRPISHFFSSTGAGLALYIVLIITPFIVLCPLYYYY------QKH 95 (242)
Q Consensus 22 ~~~~~~~r~~fl~kvy~~l~~~ll~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~------~~~ 95 (242)
..+.+++| +.+..+|..++.++.+|+..+......+.+.+++.+..| ++.++++..+.+.-... ...
T Consensus 105 ~iWPqyVr-dRI~sTYay~~gS~~lTA~savA~~rs~~lm~l~~rgg~------va~~~tla~mi~sG~larsi~Yq~g~ 177 (336)
T KOG1630|consen 105 VIWPQYVR-DRIHSTYAYLAGSCGLTAASAVAISRSPALMNLMMRGGW------VAIGVTLAAMIGSGMLARSIEYQPGP 177 (336)
T ss_pred cccHHHHH-HHHHHHHHHHhccHHHHHHHHHHHhccHHHHHHHhcCch------HHHHHHHHHHHhcchhhhcccCCCCc
Confidence 45667888 789999999999999999998888888888888888775 45556666554432111 112
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHH
Q 026155 96 PVNYLLLGVFTIALSFAVGLTCAYTKGEVILESAILTAVVVISLTLYTFWAARRGHDFNFLGPFLFGAVMVLLVFAFIQI 175 (242)
Q Consensus 96 p~n~~~l~~ft~~~g~~l~~~~~~~~~~~i~~A~~~T~~if~~l~l~a~~a~~tk~d~~~~~~~l~~~l~~liv~~l~~~ 175 (242)
..+...+.+.....|..++|+|.. +.++...|...|++++.+++..+.+|+..|. ..+++.|-+++-++++.++.++
T Consensus 178 gaKhLAW~lHc~vlGAV~APlc~l-gGPiLtrAa~YTaGIVGgLStvA~cAPSeKF--L~MggPLaiGlGvVFvssl~sm 254 (336)
T KOG1630|consen 178 GAKHLAWLLHCGVLGAVVAPLCFL-GGPILTRAAWYTAGIVGGLSTVAACAPSEKF--LNMGGPLAIGLGVVFVSSLGSM 254 (336)
T ss_pred cHHHHHHHHHHHHHHHHHhhHHhc-ccHHHHHHHHHHccccchhhhhhhcCcHHHH--hhcCCCceeeeeeEehhhhhhh
Confidence 347889999999999999999975 5668889999999999999998887766654 8899999999999999999999
Q ss_pred HhCchh----HHHHHHHHHHHHHHHHHHHHHHHHHhhc------CC--c-cHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 026155 176 LFPLGR----ISVMIYGGLASIIFCGYIIYDTDNLIKR------YS--Y-DEYIWAAVALYLDIINLFLSLLTIFRAAD 241 (242)
Q Consensus 176 f~~~~~----~~~~i~~~~g~~lf~~~l~~Dtq~i~~~------~~--~-~dyi~~Al~LylDiinlFl~iL~il~~~~ 241 (242)
|.|... -+..+--|.|+++|++|++||||++.|+ ++ | -|++.+++++|+|.+|+|++|..|++..|
T Consensus 255 ~LPPtta~GA~LaSmslYGGLiLFS~FLLYDTQr~vk~ae~ypq~s~~~~~dPin~~msiymdvlnifiriv~il~ggq 333 (336)
T KOG1630|consen 255 FLPPTTALGAGLASMSLYGGLILFSGFLLYDTQRVVKSAEKYPQYSEFPNYDPINACMSIYMDVLNIFIRIVMILGGGQ 333 (336)
T ss_pred hcCCchhhhhhhHHHHHhccHHHHHHHHHHhHHHHHHHHHhCcchhccCCCCchHHHHHHHHHHHHHHHHHHhhhcCCc
Confidence 987432 2345556889999999999999999853 11 2 68999999999999999999999999743
No 8
>PF12811 BaxI_1: Bax inhibitor 1 like ; InterPro: IPR010539 Bax inhibitor-1 (BI1) family contains six known genes in human. Some members of BI1 family have been proved to play important roles in cell death [, ].
Probab=99.71 E-value=6.3e-15 Score=128.75 Aligned_cols=164 Identities=13% Similarity=0.138 Sum_probs=123.6
Q ss_pred HHHHHHHHHHHHHHHhhhccc-chhHHHHHHHHHHHHHHHHHHHHhhcc-------chhHHHHHHHHHHHHHHHHHHHhh
Q 026155 74 YIVLIITPFIVLCPLYYYYQK-HPVNYLLLGVFTIALSFAVGLTCAYTK-------GEVILESAILTAVVVISLTLYTFW 145 (242)
Q Consensus 74 ~~~~~i~~i~~~~~~~~~~~~-~p~n~~~l~~ft~~~g~~l~~~~~~~~-------~~~i~~A~~~T~~if~~l~l~a~~ 145 (242)
..+..++.+++.+..+++|+. +| .+-..|+++||+.+|.+...++ |+++.+|...|.++|++|.+ .+
T Consensus 91 ~~~g~i~glvl~lv~~F~~~~~sp---~l~~~YA~~EG~flG~iS~~f~~~~~~~~pGIv~qAvl~T~~vf~~ml~-lY- 165 (274)
T PF12811_consen 91 AIVGAIGGLVLALVISFKRKVWSP---ALAPIYAVLEGVFLGGISAVFENIYYSRYPGIVFQAVLGTFGVFAVMLA-LY- 165 (274)
T ss_pred HHHHHHHHHHHHHHHHhCCccCCh---HHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHHHHHHHH-HH-
Confidence 344556666666666666554 56 4456899999999998765432 78999999999999999865 22
Q ss_pred hhccccchhhhhHHHHHHHHHHHHHHHHHHHhC-------chhHHHHHHHHHHHHHHHHHHHHHHHHHhhc---C-CccH
Q 026155 146 AARRGHDFNFLGPFLFGAVMVLLVFAFIQILFP-------LGRISVMIYGGLASIIFCGYIIYDTDNLIKR---Y-SYDE 214 (242)
Q Consensus 146 a~~tk~d~~~~~~~l~~~l~~liv~~l~~~f~~-------~~~~~~~i~~~~g~~lf~~~l~~Dtq~i~~~---~-~~~d 214 (242)
.+..-|.-.+..++...+..+..++.++++.+. .+.++.+.++.+++.+-+..++.|++.|++. . .++.
T Consensus 166 k~g~IrvT~kf~~iv~~a~~gi~~~~Lv~~vl~lf~~~l~~~gplgI~~slv~v~iAa~sLllDFd~Ie~~v~~gaPk~~ 245 (274)
T PF12811_consen 166 KTGIIRVTPKFRRIVMIATFGIALFYLVNLVLSLFVGSLRDGGPLGIGFSLVVVGIAALSLLLDFDFIEQGVRQGAPKKM 245 (274)
T ss_pred HhCCeeechHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCChHHHHHHHHHHHHHHHHHHhhHHHHHHHHHcCCChhh
Confidence 113334445788888888878787777775432 1345678899999999999999999999753 2 3456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 026155 215 YIWAAVALYLDIINLFLSLLTIFRAADN 242 (242)
Q Consensus 215 yi~~Al~LylDiinlFl~iL~il~~~~~ 242 (242)
.+.+|++|-+.++++|++|||++.+.+|
T Consensus 246 eW~~AfGL~vTLVWLYlEILRLL~~l~~ 273 (274)
T PF12811_consen 246 EWYAAFGLLVTLVWLYLEILRLLSKLQN 273 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999999999999997543
No 9
>COG4760 Predicted membrane protein [Function unknown]
Probab=99.17 E-value=4.3e-09 Score=87.71 Aligned_cols=163 Identities=17% Similarity=0.243 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHHHHHhh-hcccchhHHHHHHHHHHHHHHHHHHHHh------hcc---chhHHHHHHHHHHHHHHHHHH
Q 026155 73 LYIVLIITPFIVLCPLYY-YYQKHPVNYLLLGVFTIALSFAVGLTCA------YTK---GEVILESAILTAVVVISLTLY 142 (242)
Q Consensus 73 ~~~~~~i~~i~~~~~~~~-~~~~~p~n~~~l~~ft~~~g~~l~~~~~------~~~---~~~i~~A~~~T~~if~~l~l~ 142 (242)
+..+..++.+++.....+ +++.+| +.-..|++.+|+.+|.+.. .++ +..|.+|...|.++|++|-+.
T Consensus 86 ltlvGaiGGlilvLvatFgkK~~sp---ai~l~YAv~EGlFlGaiS~lla~ftV~~anaGgligqAvLgT~Gvf~gML~v 162 (276)
T COG4760 86 LTLVGAIGGLILVLVATFGKKQWSP---AIVLSYAVLEGLFLGAISFLLANFTVYEANAGGLIGQAVLGTFGVFFGMLVV 162 (276)
T ss_pred HhHHHHhhhHHHHHHHHhccccCCh---HHHHHHHHHHHHHHHHHHHHhccceEEeccccceeHHHHHHHHHHHHHHHHH
Confidence 444555666655554444 455566 6677899999999987652 222 578999999999999999653
Q ss_pred Hhhhhccc--cchhhhhHHHHHH---HHHHHHHHHHH-HHhCc-------hhHHHHHHH--HHHHHHHHHHHHHHH-HHH
Q 026155 143 TFWAARRG--HDFNFLGPFLFGA---VMVLLVFAFIQ-ILFPL-------GRISVMIYG--GLASIIFCGYIIYDT-DNL 206 (242)
Q Consensus 143 a~~a~~tk--~d~~~~~~~l~~~---l~~liv~~l~~-~f~~~-------~~~~~~i~~--~~g~~lf~~~l~~Dt-q~i 206 (242)
+ +|. +--.+....+..+ ..++++-.++. +|.+. +..+.+++| ++|+.-|++.+-+|. +++
T Consensus 163 -Y---ktGaIkvTpkF~r~v~a~~~Gvl~L~Lgn~vla~F~Gg~~pllr~gG~~~IiFSLfcigiAAf~fllDFDaad~~ 238 (276)
T COG4760 163 -Y---KTGAIKVTPKFTRMVVAATFGVLVLMLGNFVLAMFVGGGIPLLRSGGPFGIIFSLFCIGIAAFSFLLDFDAADQM 238 (276)
T ss_pred -H---hcCceeecchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCceEeeHHHHHHHHHHHHHHhhhhHHHHH
Confidence 2 221 1112333344433 34444444443 34221 112335555 456666666555554 223
Q ss_pred hhcCC-ccHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 026155 207 IKRYS-YDEYIWAAVALYLDIINLFLSLLTIFRAADN 242 (242)
Q Consensus 207 ~~~~~-~~dyi~~Al~LylDiinlFl~iL~il~~~~~ 242 (242)
+++.. ++..+..|++|-+..+++|+++||+++.-||
T Consensus 239 vr~GAP~kmaWgvAlGL~VTLVWLY~EiLRLLSy~Qn 275 (276)
T COG4760 239 VRAGAPEKMAWGVALGLTVTLVWLYLEILRLLSYLQN 275 (276)
T ss_pred HHcCChhhhHHHHHHhHHHHHHHHHHHHHHHHHHhhc
Confidence 33443 4567999999999999999999999997665
No 10
>PF09925 DUF2157: Predicted membrane protein (DUF2157); InterPro: IPR018677 This family of various hypothetical prokaryotic proteins has no known function.
Probab=67.83 E-value=58 Score=25.61 Aligned_cols=85 Identities=13% Similarity=0.136 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhCchhHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 026155 31 AFIRKIYSIIAIQLLATIAVASVVVSVRPISHFFSSTGAGLALYIVLIITPFIVLCPLYYYYQKHPVNYLLLGVFTIALS 110 (242)
Q Consensus 31 ~fl~kvy~~l~~~ll~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~p~n~~~l~~ft~~~g 110 (242)
++..++...++..++..++..++..+.+.+.+..+- .+.....+++.+..... .++++.+..-.++.+-+++.|
T Consensus 30 ~~~~~~l~~lGall~~~gii~fvA~nW~~i~~~~k~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~l~~~l~g 103 (145)
T PF09925_consen 30 SWLARILLYLGALLLGLGIILFVAANWDDIPRLAKL-----GLLLALLLLSYVGGFWL-WRRRSPRLAEALLLLGAVLFG 103 (145)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHH-----HHHHHHHHHHHHHHHHH-HhccCcHHHHHHHHHHHHHHH
Confidence 368888888888888877777776655443332211 01111111222211111 123334455666777777777
Q ss_pred HHHHHHHhhcc
Q 026155 111 FAVGLTCAYTK 121 (242)
Q Consensus 111 ~~l~~~~~~~~ 121 (242)
..++.+--.|+
T Consensus 104 a~ialigQ~y~ 114 (145)
T PF09925_consen 104 ALIALIGQIYQ 114 (145)
T ss_pred HHHHHHHhHhc
Confidence 77777665443
No 11
>PF05684 DUF819: Protein of unknown function (DUF819); InterPro: IPR008537 This family contains proteins of unknown function from archaeal, bacterial and plant species.
Probab=61.06 E-value=1.1e+02 Score=28.40 Aligned_cols=25 Identities=4% Similarity=0.115 Sum_probs=15.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhH
Q 026155 34 RKIYSIIAIQLLATIAVASVVVSVR 58 (242)
Q Consensus 34 ~kvy~~l~~~ll~t~~~~~~~~~~~ 58 (242)
+..-..++.++.++++...+....+
T Consensus 206 ~~l~~~la~a~~v~~~s~~la~~l~ 230 (378)
T PF05684_consen 206 QDLAFLLAVAFAVVALSHALAAWLP 230 (378)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566667777776666666554443
No 12
>PF05884 ZYG-11_interact: Interactor of ZYG-11; InterPro: IPR008574 This family consists of proteins of unknown function found in Caenorhabditis species.
Probab=55.42 E-value=1.6e+02 Score=26.53 Aligned_cols=86 Identities=17% Similarity=0.097 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hHHHHHHHhhCchhHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHH
Q 026155 32 FIRKIYSIIAIQLLATIAVASVVVS-VRPISHFFSSTGAGLALYIVLIITPFIVLCPLYYYYQKHPVNYLLLGVFTIALS 110 (242)
Q Consensus 32 fl~kvy~~l~~~ll~t~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~p~n~~~l~~ft~~~g 110 (242)
-+-|+|.+-++-++...+..+++-+ .+++-..+..+.. - .....++++....+.++.+.+.....-..+..+++.+|
T Consensus 101 ~i~~tF~~ssIlLl~~Siss~iG~YiLapl~~~i~~~~g-A-aila~iviP~~~~y~ln~~~~s~~~~R~~ll~~a~~QG 178 (299)
T PF05884_consen 101 SIVETFSWSSILLLGFSISSFIGGYILAPLFGIIFGPFG-A-AILAYIVIPLIAYYYLNKEDGSLAESRLALLFFALFQG 178 (299)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-H-HHHHHHHHHHHHHhhcccccCchHHHHHHHHHHHHHHH
Confidence 3556777777776666666666544 3454444333321 0 11122222332222222211211112355788899999
Q ss_pred HHHHHHHhh
Q 026155 111 FAVGLTCAY 119 (242)
Q Consensus 111 ~~l~~~~~~ 119 (242)
+.+|....+
T Consensus 179 vL~Ga~ls~ 187 (299)
T PF05884_consen 179 VLVGAGLSH 187 (299)
T ss_pred HHHHHHhhc
Confidence 999998865
No 13
>KOG3488 consensus Dolichol phosphate-mannose regulatory protein (DPM2) [Posttranslational modification, protein turnover, chaperones]
Probab=51.40 E-value=83 Score=22.09 Aligned_cols=55 Identities=31% Similarity=0.444 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHHHHH-------HHHHHhhcC-CccHH---HH-HHHHHHHHHHHHHHHHHHHHhc
Q 026155 185 MIYGGLASIIFCGYIIY-------DTDNLIKRY-SYDEY---IW-AAVALYLDIINLFLSLLTIFRA 239 (242)
Q Consensus 185 ~i~~~~g~~lf~~~l~~-------Dtq~i~~~~-~~~dy---i~-~Al~LylDiinlFl~iL~il~~ 239 (242)
..+.+++..+|.-|+++ |.|.+++++ -|+|| +. +|.-.-+-++..|+..+.+=.+
T Consensus 10 l~lv~iSl~iFtYYT~WViilPFvDs~hiihKyFLpr~yAi~iPvaagl~ll~lig~Fis~vMlKsk 76 (81)
T KOG3488|consen 10 LMLVYISLAIFTYYTIWVIILPFVDSMHIIHKYFLPREYAITIPVAAGLFLLCLIGTFISLVMLKSK 76 (81)
T ss_pred HHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHhcChhHHhhhHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 34455566666666553 778888765 56776 22 4445556789999999877554
No 14
>PF07886 BA14K: BA14K-like protein; InterPro: IPR012413 The sequences found in this family are similar to the BA14K proteins expressed by Brucella abortus (Q44701 from SWISSPROT) and by Brucella suis (Q8FVU0 from SWISSPROT). BA14K was found to be strongly immunoreactive; it induces both humoral and cellular responses in hosts throughout the infective process [].
Probab=38.21 E-value=9.7 Score=22.31 Aligned_cols=15 Identities=27% Similarity=0.348 Sum_probs=12.0
Q ss_pred CCCCCCCcccCCCCC
Q 026155 3 AQPYRKSDVEAGATP 17 (242)
Q Consensus 3 ~~~~~~~~~~~~~~~ 17 (242)
++-||++||++|+.-
T Consensus 7 ~~rYRSy~p~~~Ty~ 21 (31)
T PF07886_consen 7 ARRYRSYDPRDNTYQ 21 (31)
T ss_pred HHHhcCCCCCCCcEe
Confidence 356999999999753
No 15
>KOG3103 consensus Rab GTPase interacting factor, Golgi membrane protein [Intracellular trafficking, secretion, and vesicular transport]
Probab=37.76 E-value=2e+02 Score=25.11 Aligned_cols=57 Identities=18% Similarity=0.232 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhccccchhhhhHHHHHHHHHHHHHHHHHHHhCchhHH
Q 026155 123 EVILESAILTAVVVISLTLYTFWAARRGHDFNFLGPFLFGAVMVLLVFAFIQILFPLGRIS 183 (242)
Q Consensus 123 ~~i~~A~~~T~~if~~l~l~a~~a~~tk~d~~~~~~~l~~~l~~liv~~l~~~f~~~~~~~ 183 (242)
-+...++.++..++..+-+-+ ++.-.+....+++--++.=+++.+.++++++.....
T Consensus 143 yIygi~~~gsl~iy~L~nlm~----~~nv~f~~~aSVlGYcLLPlvvlS~v~i~~~~~g~v 199 (249)
T KOG3103|consen 143 YIYGISLLGSLSIYFLLNLMS----NKNVSFGCVASVLGYCLLPLVVLSFVNIFVGLQGTV 199 (249)
T ss_pred EEeeeHHHHHHHHHHHHHHHh----hcCcceeeehHHHHHHHHHHHHHHHHHHHHhccchH
Confidence 344566677778888777655 344456677777777788888889999988744333
No 16
>PF03242 LEA_3: Late embryogenesis abundant protein; InterPro: IPR004926 Late-embryogenesis abundant (LEA) genes encode a diverse group of proteins that accumulate to high levels during the maturation phase of seed development []. This group includes LEA-5 [], whose expression is induced by salt, drought and heat stress [], and related proteins. ; GO: 0006950 response to stress
Probab=27.37 E-value=43 Score=24.78 Aligned_cols=24 Identities=21% Similarity=0.252 Sum_probs=16.9
Q ss_pred cccCCCC-CCCCcc-cCCHHHHHHHH
Q 026155 10 DVEAGAT-PLYPMM-SESPQLRWAFI 33 (242)
Q Consensus 10 ~~~~~~~-~~~~~~-~~~~~~r~~fl 33 (242)
||.+|-| |+.-.. .+..+.|..++
T Consensus 67 DPvTGyyrPen~~~EiD~AeLR~~lL 92 (93)
T PF03242_consen 67 DPVTGYYRPENHFGEIDAAELRAKLL 92 (93)
T ss_pred CCCCccccCCCCCCCCCHHHHHHHHh
Confidence 9999998 766433 45557887665
No 17
>PF14362 DUF4407: Domain of unknown function (DUF4407)
Probab=26.00 E-value=4.6e+02 Score=23.07 Aligned_cols=15 Identities=0% Similarity=0.140 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHH
Q 026155 103 GVFTIALSFAVGLTC 117 (242)
Q Consensus 103 ~~ft~~~g~~l~~~~ 117 (242)
.+.++++|+++|..+
T Consensus 87 ~~lAvliaivIs~pl 101 (301)
T PF14362_consen 87 LLLAVLIAIVISEPL 101 (301)
T ss_pred HHHHHHHHHHHHHHH
Confidence 567788888877544
No 18
>PF11317 DUF3119: Protein of unknown function (DUF3119); InterPro: IPR021467 This family of proteins has no known function.
Probab=23.80 E-value=88 Score=24.14 Aligned_cols=21 Identities=19% Similarity=0.498 Sum_probs=16.3
Q ss_pred HHHHHHHHHHHHHHHHHhhcC
Q 026155 190 LASIIFCGYIIYDTDNLIKRY 210 (242)
Q Consensus 190 ~g~~lf~~~l~~Dtq~i~~~~ 210 (242)
+.+.+|+.++++.|-+++-++
T Consensus 31 ~~v~lfGlFL~~Qt~~lR~~F 51 (116)
T PF11317_consen 31 LVVALFGLFLLFQTTRLRLQF 51 (116)
T ss_pred HHHHHHHHHHHHhheeEEEEE
Confidence 357789999999998886443
No 19
>PRK10245 adrA diguanylate cyclase AdrA; Provisional
Probab=22.69 E-value=5.8e+02 Score=23.15 Aligned_cols=24 Identities=17% Similarity=0.164 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q 026155 31 AFIRKIYSIIAIQLLATIAVASVV 54 (242)
Q Consensus 31 ~fl~kvy~~l~~~ll~t~~~~~~~ 54 (242)
+|.||+|.-=.+|+...+..+...
T Consensus 31 ~~~~r~~~~r~~g~~~~~~~~~~~ 54 (366)
T PRK10245 31 RFARRVRLPRAVGLAGMFLPIAST 54 (366)
T ss_pred hhHHHHHHHHHHHHHHhHHHHHHH
Confidence 499999988777776655544443
No 20
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=22.37 E-value=8.4e+02 Score=24.89 Aligned_cols=12 Identities=17% Similarity=0.285 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHH
Q 026155 189 GLASIIFCGYII 200 (242)
Q Consensus 189 ~~g~~lf~~~l~ 200 (242)
.+|+.-|+|.+.
T Consensus 219 ~~~~~af~GLla 230 (764)
T TIGR02865 219 QIGVFGFAGLLG 230 (764)
T ss_pred HHHHHHHHHHHH
Confidence 344444555443
No 21
>COG1030 NfeD Membrane-bound serine protease (ClpP class) [Posttranslational modification, protein turnover, chaperones]
Probab=22.11 E-value=6.3e+02 Score=24.06 Aligned_cols=19 Identities=11% Similarity=0.244 Sum_probs=10.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 026155 187 YGGLASIIFCGYIIYDTDN 205 (242)
Q Consensus 187 ~~~~g~~lf~~~l~~Dtq~ 205 (242)
.+.+..++.+..+++|...
T Consensus 309 l~Gii~~iiG~~~L~~~~~ 327 (436)
T COG1030 309 LLGIILFIIGLLLLFPSGT 327 (436)
T ss_pred HHHHHHHHHhhhhccCCCC
Confidence 3444555566666666554
No 22
>PF14800 DUF4481: Domain of unknown function (DUF4481)
Probab=22.07 E-value=1.2e+02 Score=27.28 Aligned_cols=13 Identities=31% Similarity=0.593 Sum_probs=8.5
Q ss_pred CCCCCCCCcccCCCC
Q 026155 2 WAQPYRKSDVEAGAT 16 (242)
Q Consensus 2 ~~~~~~~~~~~~~~~ 16 (242)
|-.| +||+|.-.+
T Consensus 15 ~~tp--~F~~e~~~E 27 (308)
T PF14800_consen 15 WCTP--SFDPELCPE 27 (308)
T ss_pred eecC--ccChhhCHH
Confidence 3445 788887754
No 23
>COG4393 Predicted membrane protein [Function unknown]
Probab=21.51 E-value=6.5e+02 Score=23.26 Aligned_cols=73 Identities=10% Similarity=0.177 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhhCchhHHHHHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHH
Q 026155 34 RKIYSIIAIQLLATIAVASVVVSVRPISHFFSSTGAGLALYIVLIITPFIVLCPLYYYYQKHPVNYLLLGVFTIALSFAV 113 (242)
Q Consensus 34 ~kvy~~l~~~ll~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~~~~~p~n~~~l~~ft~~~g~~l 113 (242)
-|.+..+.++++....+.++..+.|..+++...-- ...++++.+.+...+.++..-.|...+ +.+++.|+--
T Consensus 29 ~~~~~vvwl~~L~~~~g~~~~~y~pKsq~~~l~l~-------~v~i~sLLlf~~sqfw~~i~l~~Fw~~-lLsF~aaL~w 100 (405)
T COG4393 29 FKSFFVVWLGFLFGYFGFFIAAYFPKSQNLILNLD-------FVFIGSLLLFFISQFWKKIELLNFWLL-LLSFCAALHW 100 (405)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhcccccceeehhH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhh
Confidence 35555666777776677777777776555432211 123344444344444555555555444 5555555543
Q ss_pred H
Q 026155 114 G 114 (242)
Q Consensus 114 ~ 114 (242)
|
T Consensus 101 g 101 (405)
T COG4393 101 G 101 (405)
T ss_pred c
Confidence 3
No 24
>COG4956 Integral membrane protein (PIN domain superfamily) [General function prediction only]
Probab=20.85 E-value=6.5e+02 Score=23.03 Aligned_cols=26 Identities=19% Similarity=0.480 Sum_probs=19.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHh
Q 026155 93 QKHPVNYLLLGVFTIALSFAVGLTCA 118 (242)
Q Consensus 93 ~~~p~n~~~l~~ft~~~g~~l~~~~~ 118 (242)
++-|..-+++....+..|+.++.+..
T Consensus 74 ~k~~~~~ilf~tiGLiiGLlia~l~~ 99 (356)
T COG4956 74 RKLPVTTILFGTIGLIIGLLIAVLLS 99 (356)
T ss_pred HhcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 45666778888888888888887654
Done!