BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026159
(242 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224093158|ref|XP_002309813.1| predicted protein [Populus trichocarpa]
gi|222852716|gb|EEE90263.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 211/242 (87%), Positives = 229/242 (94%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVAAGIGYAL+ALGPSLSLF++VISKKPFLILTVLSSTLLWL+SLIVL+G+WRAFLPLK
Sbjct: 1 MTVAAGIGYALLALGPSLSLFISVISKKPFLILTVLSSTLLWLMSLIVLAGVWRAFLPLK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
STTWWPFA+LI++SV FQEGLR+LFWKVYKRLED LDAFADR+ KPRLFLTDKM IALAG
Sbjct: 61 STTWWPFAILILTSVSFQEGLRILFWKVYKRLEDILDAFADRLAKPRLFLTDKMLIALAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFCLSLLTPAFGPATF+VD+C Q+PFFL+SAIIALAFVTIHT SMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFVDKCSQLPFFLVSAIIALAFVTIHTCSMVIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GYAEGN DQYFVP VHLVAGMVTLVNFASGGCVVGIPLLY +A L LLHCGKMVWRRL+
Sbjct: 181 GYAEGNKVDQYFVPAVHLVAGMVTLVNFASGGCVVGIPLLYFMAILTLLHCGKMVWRRLS 240
Query: 241 AS 242
+
Sbjct: 241 ET 242
>gi|297826587|ref|XP_002881176.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297327015|gb|EFH57435.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 250
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/242 (82%), Positives = 224/242 (92%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVAAGIGYAL+ALGPSLSLFV+VIS+KPFLILTVLSSTLLWL+SLI+LSG+WR FLPLK
Sbjct: 1 MTVAAGIGYALVALGPSLSLFVSVISRKPFLILTVLSSTLLWLVSLIILSGLWRPFLPLK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+ WWP+ALL+I+SV FQEGLR LFWKVYKRLED LD+FADR+ +PRLFLTDK+QIALAG
Sbjct: 61 ANVWWPYALLVITSVCFQEGLRFLFWKVYKRLEDVLDSFADRISRPRLFLTDKLQIALAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFCLSLLTPAFGPATFYV+RC ++PFFLISAIIALAFVTIHTFSMVIAF
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVERCSKVPFFLISAIIALAFVTIHTFSMVIAFE 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GYA+GN DQ VPV+HL AGM+TLVNFAS GCV+GIPLLY++ASL L+HCGKMVW+RL
Sbjct: 181 GYAKGNKVDQVIVPVIHLAAGMLTLVNFASEGCVIGIPLLYLVASLTLVHCGKMVWQRLL 240
Query: 241 AS 242
S
Sbjct: 241 ES 242
>gi|18402667|ref|NP_565724.1| gamma-secretase subunit APH1-like protein [Arabidopsis thaliana]
gi|37077331|sp|Q8L9G7.2|APH1_ARATH RecName: Full=Gamma-secretase subunit APH1-like
gi|17381290|gb|AAL36063.1| At2g31440/T28P16.7 [Arabidopsis thaliana]
gi|20198156|gb|AAD26475.2| unknown protein [Arabidopsis thaliana]
gi|20453379|gb|AAM19928.1| At2g31440/T28P16.7 [Arabidopsis thaliana]
gi|330253454|gb|AEC08548.1| gamma-secretase subunit APH1-like protein [Arabidopsis thaliana]
Length = 250
Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust.
Identities = 198/242 (81%), Positives = 224/242 (92%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVAAGIGYAL+ALGPSLSLFV+VIS+KPFLILTVLSSTLLWL+SLI+LSG+WR FLPLK
Sbjct: 1 MTVAAGIGYALVALGPSLSLFVSVISRKPFLILTVLSSTLLWLVSLIILSGLWRPFLPLK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+ WWP+ALL+I+SV FQEGLR LFWKVYKRLED LD+FADR+ +PRLFLTDK+QIALAG
Sbjct: 61 ANVWWPYALLVITSVCFQEGLRFLFWKVYKRLEDVLDSFADRISRPRLFLTDKLQIALAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFCLSLLTPAFGPATFYV+RC ++PFFLISAIIALAFVTIHTFSMVIAF
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVERCSKVPFFLISAIIALAFVTIHTFSMVIAFE 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GYA+GN DQ VPV+HL AGM+TLVNFAS GCV+G+PLLY++ASL L+HCGKMVW+RL
Sbjct: 181 GYAKGNKVDQIIVPVIHLTAGMLTLVNFASEGCVIGVPLLYLVASLTLVHCGKMVWQRLL 240
Query: 241 AS 242
S
Sbjct: 241 ES 242
>gi|21594204|gb|AAM65980.1| unknown [Arabidopsis thaliana]
Length = 250
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/242 (81%), Positives = 224/242 (92%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVAAGIGYAL+ALGPSLSLFV+VIS+KPFLILTVLSSTLLWL+SLI+LSG+WR FLPLK
Sbjct: 1 MTVAAGIGYALVALGPSLSLFVSVISRKPFLILTVLSSTLLWLVSLIILSGLWRPFLPLK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+ WWP+A+L+I+SV FQEGLR LFWKVYKRLED LD+FADR+ +PRLFLTDK+QIALAG
Sbjct: 61 ANVWWPYAVLVITSVCFQEGLRFLFWKVYKRLEDVLDSFADRISRPRLFLTDKLQIALAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFCLSLLTPAFGPATFYV+RC ++PFFLISAIIALAFVTIHTFSMVIAF
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVERCSKVPFFLISAIIALAFVTIHTFSMVIAFE 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GYA+GN DQ VPV+HL AGM+TLVNFAS GCV+G+PLLY++ASL L+HCGKMVW+RL
Sbjct: 181 GYAKGNKVDQIIVPVIHLTAGMLTLVNFASEGCVIGVPLLYLVASLTLVHCGKMVWQRLL 240
Query: 241 AS 242
S
Sbjct: 241 ES 242
>gi|388495380|gb|AFK35756.1| unknown [Lotus japonicus]
Length = 249
Score = 409 bits (1050), Expect = e-112, Method: Compositional matrix adjust.
Identities = 194/242 (80%), Positives = 218/242 (90%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV+AGIGYAL+ALGPSLS+F++VISKKPFLILTVLSSTLLWLISLIVLSGIWR FLPL
Sbjct: 1 MTVSAGIGYALVALGPSLSIFISVISKKPFLILTVLSSTLLWLISLIVLSGIWRGFLPLS 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+T WWP+A+LI+SS+ FQEGLR+ FWK+YKRLED LDAFADRV KP LFLTDKM IALAG
Sbjct: 61 TTAWWPYAILILSSIAFQEGLRLFFWKIYKRLEDILDAFADRVSKPHLFLTDKMLIALAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFC+SLLTPAFGPAT++VDRC Q+PFFL+SA+I LAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDRCSQVPFFLLSALIGLAFVTIHTFSMVIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GYAEGN DQYFVP+VH VAG VT+VN A GGC VGIPLLY + L L+HCG+M WRRLT
Sbjct: 181 GYAEGNKVDQYFVPIVHFVAGAVTMVNLAPGGCTVGIPLLYFVTFLTLIHCGRMAWRRLT 240
Query: 241 AS 242
+
Sbjct: 241 EN 242
>gi|356538907|ref|XP_003537942.1| PREDICTED: gamma-secretase subunit APH1-like [Glycine max]
Length = 249
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 196/242 (80%), Positives = 216/242 (89%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVAAGIGYAL+ALGPSLSLFV+VISKKPFLILTVLSSTLLWLISLIVLSGIWR LPL
Sbjct: 1 MTVAAGIGYALVALGPSLSLFVSVISKKPFLILTVLSSTLLWLISLIVLSGIWRGVLPLS 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+T WPF +LI SSV FQE LR+ FWK+YKRLED LDAFADRV KP L LTDKM IALAG
Sbjct: 61 TTASWPFGILIFSSVAFQEALRLFFWKIYKRLEDMLDAFADRVSKPHLHLTDKMLIALAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFC+SLLTPAFGPAT++VDRC ++PFFL+SAIIALAFV IHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDRCSRVPFFLLSAIIALAFVIIHTFSMVIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GY EGN DQYFVP+VH+VAGMVTLVN A GGC VGIPLLY++A L L+HCG+MVWR+LT
Sbjct: 181 GYTEGNKVDQYFVPIVHVVAGMVTLVNLAPGGCAVGIPLLYLVAILTLIHCGRMVWRKLT 240
Query: 241 AS 242
+
Sbjct: 241 EN 242
>gi|363807826|ref|NP_001241927.1| uncharacterized protein LOC100794637 [Glycine max]
gi|255642888|gb|ACU22669.1| unknown [Glycine max]
Length = 249
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 193/242 (79%), Positives = 217/242 (89%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVAAG+GYAL+ALGPSLS+FV+VISKKPFLILTVLSSTLLWLISLIVLSGIWR LPL
Sbjct: 1 MTVAAGMGYALLALGPSLSIFVSVISKKPFLILTVLSSTLLWLISLIVLSGIWRGVLPLN 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+T WWPF +LI SSV FQE LR+ WK+YKRL+D LDAFADR+ KP L LTDKM IALAG
Sbjct: 61 TTAWWPFGILIFSSVAFQEALRLFSWKIYKRLQDMLDAFADRISKPHLHLTDKMLIALAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFC+SLLTPAFGPAT++VDRC ++PFFL+SAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDRCSKVPFFLLSAIIALAFVTIHTFSMVIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GY+EGN DQYFVP+VH+VAGMVTLVN A GGC VGIPLLY++A L L+HCG+MVWR+LT
Sbjct: 181 GYSEGNKVDQYFVPIVHVVAGMVTLVNLAPGGCAVGIPLLYLVAILTLIHCGRMVWRKLT 240
Query: 241 AS 242
Sbjct: 241 ED 242
>gi|225433856|ref|XP_002264306.1| PREDICTED: gamma-secretase subunit APH1-like [Vitis vinifera]
gi|297743767|emb|CBI36650.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 207/242 (85%), Positives = 225/242 (92%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV AGIGYALIALGPS SLFV+VISKKPFLILTVLSSTLLWLISLIVLSG+WRAFLPLK
Sbjct: 1 MTVTAGIGYALIALGPSFSLFVSVISKKPFLILTVLSSTLLWLISLIVLSGVWRAFLPLK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+T WWP+A+LII+S+ FQEGLR+LFWKVYKRLED LDAFADRV KPRLFLTDKMQIALAG
Sbjct: 61 TTAWWPYAILIITSIAFQEGLRILFWKVYKRLEDILDAFADRVSKPRLFLTDKMQIALAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHG AHAVFFCLSLLTPAFG ATF+VDRC ++PFFLISA+IALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGGAHAVFFCLSLLTPAFGRATFFVDRCSRIPFFLISALIALAFVTIHTFSMVIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GYAEGN DQ FVPVVH+VAGMVTL+N ASGGCV+GIPLLY LA L ++HCGKMVWRRLT
Sbjct: 181 GYAEGNKVDQLFVPVVHMVAGMVTLINLASGGCVIGIPLLYFLAVLTMMHCGKMVWRRLT 240
Query: 241 AS 242
+
Sbjct: 241 ET 242
>gi|388493548|gb|AFK34840.1| unknown [Medicago truncatula]
Length = 249
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 191/242 (78%), Positives = 218/242 (90%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVAAGIGYALIALGPSLS+FV+VISKKPFLILT+L+STLLWLISLI LSGIWRAFLP
Sbjct: 1 MTVAAGIGYALIALGPSLSIFVSVISKKPFLILTLLASTLLWLISLIALSGIWRAFLPFN 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
T WP+A+LI+SSV FQE LR+ FWK++KRLED LDAFADRV KP LFLTDKM IALAG
Sbjct: 61 PTAVWPYAILILSSVAFQEALRLFFWKIFKRLEDMLDAFADRVSKPHLFLTDKMLIALAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFC+SLLTPAFGPAT++VD+C ++PFFL+SA+IALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDKCSKIPFFLLSAVIALAFVTIHTFSMVIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GYAEGN D+YFVP+VH++AGM+T+VN A GGC VGIPLLY A L L+HCG+MVWRRLT
Sbjct: 181 GYAEGNKVDRYFVPIVHVIAGMLTMVNLAPGGCAVGIPLLYFTAILTLIHCGRMVWRRLT 240
Query: 241 AS 242
+
Sbjct: 241 EN 242
>gi|217075164|gb|ACJ85942.1| unknown [Medicago truncatula]
Length = 249
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 190/242 (78%), Positives = 217/242 (89%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVAAGIGYALIALGPSLS+FV+VISKKPFLILT+ +STLLWLISLI LSGIWRAFLP
Sbjct: 1 MTVAAGIGYALIALGPSLSIFVSVISKKPFLILTLPASTLLWLISLIALSGIWRAFLPFN 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
T WP+A+LI+SSV FQE LR+ FWK++KRLED LDAFADRV KP LFLTDKM IALAG
Sbjct: 61 PTAVWPYAILILSSVAFQEALRLFFWKIFKRLEDMLDAFADRVSKPHLFLTDKMLIALAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFC+SLLTPAFGPAT++VD+C ++PFFL+SA+IALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDKCSKIPFFLLSAVIALAFVTIHTFSMVIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GYAEGN D+YFVP+VH++AGM+T+VN A GGC VGIPLLY A L L+HCG+MVWRRLT
Sbjct: 181 GYAEGNKVDRYFVPIVHVIAGMLTMVNLAPGGCAVGIPLLYFTAILTLIHCGRMVWRRLT 240
Query: 241 AS 242
+
Sbjct: 241 EN 242
>gi|255647968|gb|ACU24441.1| unknown [Glycine max]
Length = 249
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 193/242 (79%), Positives = 213/242 (88%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVAAGIGYAL+ALGPSLSLFV+VISKKPFLILTVLSSTLLWLISLIVLSGIWR LPL
Sbjct: 1 MTVAAGIGYALVALGPSLSLFVSVISKKPFLILTVLSSTLLWLISLIVLSGIWRGVLPLS 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+T WPF +LI SSV FQE LR+ FWK+YKRLED LDAFADRV KP L LTDKM IALAG
Sbjct: 61 TTASWPFGILIFSSVAFQEALRLFFWKIYKRLEDMLDAFADRVSKPHLHLTDKMLIALAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFC+SLLTPAFGPAT++VDRC ++PFFL+ AIIALAFV IHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCISLLTPAFGPATYFVDRCSRVPFFLLFAIIALAFVIIHTFSMVIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GY EGN DQYFVP+VH+VAGMVTLVN A GGC VGIP LY++A L L+HCG+MVWR+L
Sbjct: 181 GYTEGNKVDQYFVPIVHVVAGMVTLVNLAPGGCAVGIPFLYLVAILTLIHCGRMVWRKLA 240
Query: 241 AS 242
+
Sbjct: 241 EN 242
>gi|255587052|ref|XP_002534115.1| gamma-secretase subunit aph-1, putative [Ricinus communis]
gi|223525827|gb|EEF28266.1| gamma-secretase subunit aph-1, putative [Ricinus communis]
Length = 249
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 203/242 (83%), Positives = 223/242 (92%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVAAGIGYAL+ALGPSLSLFV+VISKKPFLILT+LSSTLLWLISLIVLSG+WR FLPLK
Sbjct: 1 MTVAAGIGYALLALGPSLSLFVSVISKKPFLILTLLSSTLLWLISLIVLSGVWRVFLPLK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+ TWWP+ALLI++SV FQEGLR+LFWK+YKRLED LD FAD++ KPRLFLTDKM IA+AG
Sbjct: 61 TKTWWPYALLIVTSVCFQEGLRLLFWKIYKRLEDILDDFADKLSKPRLFLTDKMLIAMAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFCLSLLTPAFGPATF++D C Q+PFFL+SAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGPATFFLDSCSQIPFFLVSAIIALAFVTIHTFSMVIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GYAEGN DQ FVPVVHLVAG+VTL N ASGGCVVGIPLLY +A L LL CGKMVWRRLT
Sbjct: 181 GYAEGNKVDQIFVPVVHLVAGLVTLPNLASGGCVVGIPLLYFIAILTLLQCGKMVWRRLT 240
Query: 241 AS 242
+
Sbjct: 241 EN 242
>gi|449446239|ref|XP_004140879.1| PREDICTED: gamma-secretase subunit APH1-like [Cucumis sativus]
Length = 244
Score = 369 bits (946), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/242 (80%), Positives = 220/242 (90%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV+AGIGY LIALGPSLSLF++VI+ KPFLILT+LSSTLLWLISLI+LS +WR FLPL
Sbjct: 1 MTVSAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
ST WP+A+LI++SV FQE LRVLFWKVY+RLED LDAFADRV KPRL+L DKMQIALAG
Sbjct: 61 STVSWPYAILILTSVIFQEVLRVLFWKVYRRLEDMLDAFADRVSKPRLYLADKMQIALAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHG++HAVFFCLSLLTP+FGPAT++VDRC Q+PFFL+SAIIALAFVTIHTFSMVIAFN
Sbjct: 121 GLGHGISHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLVSAIIALAFVTIHTFSMVIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GY+EG DQYFVPV+HL AGMVTLVNFASGGCV+ IPLLYI+A L L+HCGKMVWRRL
Sbjct: 181 GYSEGKKVDQYFVPVIHLAAGMVTLVNFASGGCVISIPLLYIMAILTLIHCGKMVWRRLM 240
Query: 241 AS 242
+
Sbjct: 241 EN 242
>gi|115445495|ref|NP_001046527.1| Os02g0272600 [Oryza sativa Japonica Group]
gi|50252282|dbj|BAD28287.1| presenilin stabilization factor-like [Oryza sativa Japonica Group]
gi|113536058|dbj|BAF08441.1| Os02g0272600 [Oryza sativa Japonica Group]
gi|215740776|dbj|BAG96932.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765656|dbj|BAG87353.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218190465|gb|EEC72892.1| hypothetical protein OsI_06711 [Oryza sativa Indica Group]
gi|222622579|gb|EEE56711.1| hypothetical protein OsJ_06210 [Oryza sativa Japonica Group]
Length = 249
Score = 338 bits (867), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 163/242 (67%), Positives = 210/242 (86%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVAAG+GYAL+ALGP+ SLF V+++KPFL+LT+L+STL WLISLI+LSGIWR FLP++
Sbjct: 1 MTVAAGLGYALVALGPAFSLFAGVVARKPFLVLTLLTSTLFWLISLIILSGIWRVFLPIR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
S WWP+A+LI++SV FQEG+R++FW++YK++E+ LD+FADR+ KPRL LTDKM I+LAG
Sbjct: 61 SGAWWPYAILILTSVAFQEGIRLVFWRLYKKMEEMLDSFADRISKPRLCLTDKMLISLAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFCLSLLTPAFG ATFYV++C +MPFFL+SAII+L F+ IHTFSM+IAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGRATFYVEKCSRMPFFLVSAIISLGFLVIHTFSMIIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GY E +DQ FVPVVHL+A ++TL+N A GGCV+G PLL ++ ++ L +C +MVWRRL+
Sbjct: 181 GYDERKRSDQVFVPVVHLIASVMTLINLAPGGCVIGTPLLCVMGAVTLQYCWQMVWRRLS 240
Query: 241 AS 242
Sbjct: 241 EQ 242
>gi|357141863|ref|XP_003572373.1| PREDICTED: gamma-secretase subunit APH1-like [Brachypodium
distachyon]
Length = 249
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 166/242 (68%), Positives = 207/242 (85%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVAAG+GYALIALGP+ SLF VI+KKPFL+LT+LSSTL WLISLIV+SGIWR FLP+K
Sbjct: 1 MTVAAGVGYALIALGPAFSLFTGVIAKKPFLVLTLLSSTLFWLISLIVISGIWRGFLPVK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
S WWP+ LLI++SV FQEG+R++FW++YK++E+ LDAFADR+ KPRL LTDKM I+L G
Sbjct: 61 SGAWWPYVLLILTSVMFQEGIRLVFWRLYKKVEEMLDAFADRISKPRLSLTDKMLISLTG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHG+AHAVFFCLSLLTPAFG ATFYV+RC +MPFFL+SAII+L F+ IHTFSM+IAFN
Sbjct: 121 GLGHGLAHAVFFCLSLLTPAFGRATFYVERCSRMPFFLVSAIISLGFLLIHTFSMIIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GY E +DQ FVPVVHL+A ++TL+N A GGC++G PLL ++A++ L + +MV +RLT
Sbjct: 181 GYGERKKSDQIFVPVVHLIAAVMTLINLAPGGCLIGTPLLCVMAAVTLQYSWRMVEQRLT 240
Query: 241 AS 242
Sbjct: 241 EQ 242
>gi|326518764|dbj|BAJ92543.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527123|dbj|BAK04503.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 332 bits (852), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 164/242 (67%), Positives = 204/242 (84%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVAAG+GYALIALGP+ SLF VI++KPFL+LT+LSSTL WLISLIVLSGIWR FLPLK
Sbjct: 1 MTVAAGVGYALIALGPAFSLFAGVIARKPFLVLTLLSSTLFWLISLIVLSGIWRGFLPLK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
S WWP+ +LI++SV FQEG+R++FW++YK++E+ LDAFADR+ KPRL LTDKM I+LAG
Sbjct: 61 SGLWWPYVILILTSVAFQEGIRLVFWRLYKKMEEMLDAFADRISKPRLCLTDKMLISLAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHG+AHAVFFCLSLLTPAFG ATFYV+RC +MPFFL+SAII+L F+ IHT SM+IAFN
Sbjct: 121 GLGHGLAHAVFFCLSLLTPAFGRATFYVERCSRMPFFLVSAIISLGFLVIHTSSMIIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
GY E DQ FVPVVHL+A ++TL+N GGC++G PLL + A++ L H ++V +R+T
Sbjct: 181 GYGERKKRDQIFVPVVHLIAAVMTLINLVPGGCLIGTPLLCVTAAMTLYHSWRVVGQRIT 240
Query: 241 AS 242
Sbjct: 241 EQ 242
>gi|242064776|ref|XP_002453677.1| hypothetical protein SORBIDRAFT_04g010250 [Sorghum bicolor]
gi|241933508|gb|EES06653.1| hypothetical protein SORBIDRAFT_04g010250 [Sorghum bicolor]
Length = 250
Score = 332 bits (850), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 162/240 (67%), Positives = 202/240 (84%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+AAG+GYALIALGP+ SLF V+++KPFL+LT+LSSTL WLISLIVLSGIWR FLP+K
Sbjct: 1 MTLAAGLGYALIALGPAFSLFAGVVARKPFLVLTLLSSTLFWLISLIVLSGIWRGFLPIK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
S WW +A+LI++SV QEG R++FW++YK++E+ LDAFADR+ KPRL LTDKM I+LAG
Sbjct: 61 SEAWWAYAILILTSVALQEGTRLVFWRLYKKMEEMLDAFADRISKPRLSLTDKMLISLAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFCLSLLTPAFG ATFY++ C +MPFFL SA+IAL F+ IHTFSM+IAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGRATFYIETCSKMPFFLASALIALGFLVIHTFSMIIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
Y E +DQ FVPV+HL A ++TLVN A GGC++G PLL ++A+L L HC ++ +RLT
Sbjct: 181 AYDERKKSDQVFVPVIHLAAAVMTLVNLAPGGCLIGTPLLLVMAALTLQHCWRVACQRLT 240
>gi|226502164|ref|NP_001149690.1| gamma-secretase subunit APH-1B [Zea mays]
gi|195629486|gb|ACG36384.1| gamma-secretase subunit APH-1B [Zea mays]
gi|195638720|gb|ACG38828.1| gamma-secretase subunit APH-1B [Zea mays]
Length = 250
Score = 330 bits (846), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 163/240 (67%), Positives = 200/240 (83%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+AAG+GYALIALGP+ SLF +V+ +KPFL+LT+LSSTL WLISLIVLSGIWR FLP+K
Sbjct: 1 MTLAAGLGYALIALGPAFSLFSSVVVRKPFLVLTLLSSTLFWLISLIVLSGIWRGFLPIK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
S WW + +LI++SV QEG R++FW +YK++E+ LDAFADR+ KPRL LTDKM I+LAG
Sbjct: 61 SGAWWAYVILILTSVALQEGTRLVFWMLYKKMEEMLDAFADRISKPRLRLTDKMLISLAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFCLSLLTPAFG ATFY +RC ++PFFL SA+IAL F+ IHTFSM+IAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGRATFYTERCSKLPFFLASALIALGFLVIHTFSMIIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
Y EG +DQ FVPV+HL A +TLVN A GGC++G PLL ++A+L L HC ++ RRLT
Sbjct: 181 AYDEGKKSDQVFVPVIHLAAAAMTLVNLAPGGCLIGTPLLLVMAALTLQHCWRVACRRLT 240
>gi|194703326|gb|ACF85747.1| unknown [Zea mays]
gi|195621168|gb|ACG32414.1| gamma-secretase subunit APH-1B [Zea mays]
gi|413936392|gb|AFW70943.1| gamma-secretase subunit APH-1B [Zea mays]
Length = 250
Score = 330 bits (845), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 163/240 (67%), Positives = 199/240 (82%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+AAG+GYALIALGP+ SLF V+ +KPFL+LT+LSSTL WLISLIVLSGIWR FLP+K
Sbjct: 1 MTLAAGLGYALIALGPAFSLFSGVVVRKPFLVLTLLSSTLFWLISLIVLSGIWRGFLPIK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
S WW + +LI++SV QEG R++FW +YK++E+ LDAFADR+ KPRL LTDKM I+LAG
Sbjct: 61 SGAWWAYVILILTSVALQEGTRLVFWMLYKKMEEMLDAFADRISKPRLRLTDKMLISLAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHGVAHAVFFCLSLLTPAFG ATFY +RC ++PFFL SA+IAL F+ IHTFSM+IAFN
Sbjct: 121 GLGHGVAHAVFFCLSLLTPAFGRATFYTERCSKLPFFLTSALIALGFLVIHTFSMIIAFN 180
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
Y EG +DQ FVPV+HL A +TLVN A GGC++G PLL ++A+L L HC ++ RRLT
Sbjct: 181 AYDEGKKSDQVFVPVIHLAAAAMTLVNLAPGGCLIGTPLLLVMAALTLQHCWRVACRRLT 240
>gi|449523207|ref|XP_004168615.1| PREDICTED: gamma-secretase subunit APH1-like [Cucumis sativus]
Length = 201
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 156/242 (64%), Positives = 179/242 (73%), Gaps = 43/242 (17%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV+AGIGY LIALGPSLSLF++VI+ KPFLILT+LSSTLLWLISLI+LS +WR FLPL
Sbjct: 1 MTVSAGIGYTLIALGPSLSLFISVIAHKPFLILTLLSSTLLWLISLILLSALWRGFLPLN 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
ST WP+A+LI++SV FQE LRVLFWKVY+RLED LDAFADRV KPRL+L DKMQIALAG
Sbjct: 61 STVSWPYAILILTSVIFQEVLRVLFWKVYRRLEDMLDAFADRVSKPRLYLADKMQIALAG 120
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLGHG++HAVFFCLSLLTP+FGPAT++VDRC Q+PFFL
Sbjct: 121 GLGHGISHAVFFCLSLLTPSFGPATYFVDRCSQLPFFLFR-------------------- 160
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
TLVNFASGGCV+ IPLLYI+A L L+HCGKMVWRRL
Sbjct: 161 -----------------------TLVNFASGGCVISIPLLYIMAILTLIHCGKMVWRRLM 197
Query: 241 AS 242
+
Sbjct: 198 EN 199
>gi|302810914|ref|XP_002987147.1| hypothetical protein SELMODRAFT_235206 [Selaginella moellendorffii]
gi|300145044|gb|EFJ11723.1| hypothetical protein SELMODRAFT_235206 [Selaginella moellendorffii]
Length = 239
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 131/238 (55%), Positives = 175/238 (73%), Gaps = 1/238 (0%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVA+G+GY LIALGP SLF I KP LILT+L+STL+WL SL+ L+ +WR FLPL
Sbjct: 1 MTVASGVGYTLIALGPGFSLFFLSIVSKPLLILTLLASTLVWLASLVALAIVWRGFLPLG 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
S++W LL SSV QE LRV FW+ +K++E +L+ A R+ KP L ++K++IA+A
Sbjct: 61 SSSWICLPLLA-SSVALQEFLRVHFWRTFKKVESSLNGVAVRISKPPLRPSEKIEIAIAL 119
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
G GHG+AH++ FCLSLLTPAFGP TFY+ CPQMPFFL+ ++I+L F+ IHTFSMVI F
Sbjct: 120 GFGHGLAHSIMFCLSLLTPAFGPGTFYLRSCPQMPFFLVISVISLGFLLIHTFSMVIFFK 179
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRR 238
GY + N+ ++FVP +H VA +TLVN GCV+G PL+ + A+L L CGK +W++
Sbjct: 180 GYEDHNSGLRFFVPAMHAVASSLTLVNLVQNGCVIGTPLVMLCAALTLFVCGKSLWQK 237
>gi|302788963|ref|XP_002976250.1| hypothetical protein SELMODRAFT_104937 [Selaginella moellendorffii]
gi|300155880|gb|EFJ22510.1| hypothetical protein SELMODRAFT_104937 [Selaginella moellendorffii]
Length = 239
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 131/238 (55%), Positives = 174/238 (73%), Gaps = 1/238 (0%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTVA+G+GY LIALGP SLF I KP LILT+L+STL+WL SL+ L+ +WR FLPL
Sbjct: 1 MTVASGVGYTLIALGPGFSLFFLSIVSKPLLILTLLASTLVWLASLVALAIVWRGFLPLG 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
S+ W LL SSV QE LRV FW+ +K++E +L+ A R+ KP L ++K++IA+A
Sbjct: 61 SSDWICLPLLA-SSVALQEFLRVHFWRTFKKVESSLNGVAVRISKPPLRPSEKIEIAIAL 119
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
G GHG+AH++ FCLSLLTPAFGP TFY+ CPQMPFFL+ ++I+L F+ IHTFSMVI F
Sbjct: 120 GFGHGLAHSIMFCLSLLTPAFGPGTFYLRSCPQMPFFLVISLISLGFLLIHTFSMVIFFK 179
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRR 238
GY + N+ ++FVP +H VA +TLVN GCV+G PL+ + A+L L CGK +W++
Sbjct: 180 GYEDHNSGLRFFVPAMHAVASSLTLVNLVQNGCVIGTPLVMLCAALTLFVCGKSLWQK 237
>gi|168036098|ref|XP_001770545.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678253|gb|EDQ64714.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 249 bits (637), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 120/239 (50%), Positives = 170/239 (71%), Gaps = 3/239 (1%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
M + AG GY LIALGP+L++F + ++ KPFLILTVL+S L+WL SL + + +WRAFLP
Sbjct: 1 MGLVAGFGYFLIALGPALTIFGSSVAPKPFLILTVLASALVWLASLNIAAIVWRAFLPGP 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
S W F L++ +SV QE R+L+W +Y ++E L+ A ++ KP+ D+++IALA
Sbjct: 61 S---WVFLLILTTSVALQEAFRLLYWHLYLKIEKYLNVLATKLSKPQCNYLDRLEIALAS 117
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
G+GHG+AHAVFF LS++ PAFGPAT+Y C QMP FL+SA+ +LAF +HTFSMVIAFN
Sbjct: 118 GVGHGLAHAVFFGLSIIAPAFGPATYYTSSCKQMPLFLVSALSSLAFFLLHTFSMVIAFN 177
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRL 239
Y N + + FVP++HL A ++TLVN GC G+PL+++ +L + + GK+VW L
Sbjct: 178 AYTYDNISQKLFVPIMHLGAALLTLVNLLPNGCTAGVPLVFLCTALTMAYGGKIVWHNL 236
>gi|168018711|ref|XP_001761889.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686944|gb|EDQ73330.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 255
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 111/238 (46%), Positives = 168/238 (70%), Gaps = 3/238 (1%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
M V G+GY LIALGP+L++F + I+ KPFL LTVL+S L++L+SL+ + IWRAFLP
Sbjct: 1 MGVVVGLGYFLIALGPALTIFFSSIAPKPFLTLTVLASALIYLVSLVAAAIIWRAFLPGP 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
S W F L++ ++V QE R+ +W+ + + E L+ A ++ KP+L D+++++
Sbjct: 61 S---WVFLLMLATAVFIQEVTRIFYWRFFLKTEKYLNVLAVKLSKPQLNFVDRLEVSFGS 117
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
G+GHGVAHA+FF LS++ PAFGPAT+Y + C +MPFFL+SA++ LAF +HTFSMVIAFN
Sbjct: 118 GVGHGVAHAIFFGLSVIAPAFGPATYYTESCKEMPFFLVSALLTLAFFLLHTFSMVIAFN 177
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRR 238
Y G + + FVPV+HL A +TL+N GC+VG+PL+++ + +++ ++VW
Sbjct: 178 AYTHGVGSQKLFVPVMHLGASFLTLINLLPNGCIVGVPLVFLCTLVTMVYGDRIVWEN 235
>gi|413936393|gb|AFW70944.1| hypothetical protein ZEAMMB73_346695 [Zea mays]
Length = 159
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 102/149 (68%), Positives = 122/149 (81%)
Query: 92 LEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRC 151
+E+ LDAFADR+ KPRL LTDKM I+LAGGLGHGVAHAVFFCLSLLTPAFG ATFY +RC
Sbjct: 1 MEEMLDAFADRISKPRLRLTDKMLISLAGGLGHGVAHAVFFCLSLLTPAFGRATFYTERC 60
Query: 152 PQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVNFASG 211
++PFFL SA+IAL F+ IHTFSM+IAFN Y EG +DQ FVPV+HL A +TLVN A G
Sbjct: 61 SKLPFFLTSALIALGFLVIHTFSMIIAFNAYDEGKKSDQVFVPVIHLAAAAMTLVNLAPG 120
Query: 212 GCVVGIPLLYILASLILLHCGKMVWRRLT 240
GC++G PLL ++A+L L HC ++ RRLT
Sbjct: 121 GCLIGTPLLLVMAALTLQHCWRVACRRLT 149
>gi|384253432|gb|EIE26907.1| Aph-1, partial [Coccomyxa subellipsoidea C-169]
Length = 232
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 90/232 (38%), Positives = 138/232 (59%), Gaps = 2/232 (0%)
Query: 7 IGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWP 66
+G ALIA GP L++F + +K FL+L +L+ WL+ L++ S ++R F+PL++ T
Sbjct: 2 LGCALIAGGPGLAIFWTFLRRKAFLVLLILACAFGWLVGLLLTSMLFRGFVPLENHTG-A 60
Query: 67 FALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRV-GKPRLFLTDKMQIALAGGLGHG 125
A ++ V QE +R+ W+++++L L A+++ G R+ D+ +ALA G HG
Sbjct: 61 LAAALLVGVAVQEAMRLGCWQLHRKLVVALGQVAEKMEGAGRITREDEQLLALAQGWAHG 120
Query: 126 VAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEG 185
H++FF S L G TFY+D CPQM +FL A++ LAF +HTFSMVIAF+G EG
Sbjct: 121 ATHSLFFYYSWLPLFLGKGTFYLDECPQMSYFLAGALLTLAFNLLHTFSMVIAFDGLREG 180
Query: 186 NTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWR 237
VP+ HL A ++TLVN GC+ +PLL +L + G + W+
Sbjct: 181 KRERWAAVPIAHLGAALLTLVNLRPNGCLGSVPLLLLLGLGSAVAAGYICWQ 232
>gi|302834403|ref|XP_002948764.1| hypothetical protein VOLCADRAFT_109690 [Volvox carteri f.
nagariensis]
gi|300265955|gb|EFJ50144.1| hypothetical protein VOLCADRAFT_109690 [Volvox carteri f.
nagariensis]
Length = 238
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 92/231 (39%), Positives = 140/231 (60%), Gaps = 2/231 (0%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPF 67
G + LGP ++ F+ V+++K FL+L L S LWL+ L+++S I+R F+PL P+
Sbjct: 7 GLIFLGLGPGIAFFLVVLARKSFLVLLSLFSAFLWLVVLLIISAIFRGFVPLDPEQG-PY 65
Query: 68 ALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVA 127
A L+I+SV +E +R W+++++ + L++ A G+ R L DK+ +ALA G GH +
Sbjct: 66 AGLLIASVAIEEAVRYGVWRLHRKTLEPLESMARSSGR-RFALLDKLYMALAWGYGHSAS 124
Query: 128 HAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNT 187
HAVFF LS L T+Y CPQM FL+ A+ +L+F I T MVIAF+GY E
Sbjct: 125 HAVFFFLSFLPLTVSDGTYYNPACPQMSIFLVGALYSLSFGLILTSLMVIAFDGYMERRI 184
Query: 188 TDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRR 238
P++HL A +TL+NF GCVV +P+L L L++L+ + WR+
Sbjct: 185 AHIAAAPLLHLGASCLTLLNFKKNGCVVSMPVLVGLGLLLVLYTIGISWRK 235
>gi|159471261|ref|XP_001693775.1| gamma-secretase accessory subunit [Chlamydomonas reinhardtii]
gi|158283278|gb|EDP09029.1| gamma-secretase accessory subunit [Chlamydomonas reinhardtii]
Length = 240
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 131/223 (58%), Gaps = 2/223 (0%)
Query: 16 PSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPFALLIISSV 75
P ++ F+ +I++K FL+L L S LWL+ L+ +S I+RAF+PL S T P+ ++ +SV
Sbjct: 15 PGIAFFIVLIARKSFLVLLALFSAFLWLVVLLFISAIFRAFVPL-SPTIGPYTGMLAASV 73
Query: 76 GFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAVFFCLS 135
+E +R W +++ +TLD A R R L DK+ +A+A G GHG HAVFF LS
Sbjct: 74 FIEEAVRYGTWWLHRVTLNTLDGMA-RASGHRFGLLDKLYMAVAWGYGHGACHAVFFFLS 132
Query: 136 LLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNTTDQYFVPV 195
LL G T YV CPQM FL+ A+ +LAF I T VIAF+GY N V +
Sbjct: 133 LLPLTTGDGTLYVAECPQMSVFLVGALYSLAFGMILTSLTVIAFDGYMNKNYLVVAAVAL 192
Query: 196 VHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRR 238
+H A +TL+NF GCVV +P+L L L+ + + W++
Sbjct: 193 LHWGAAFLTLLNFQRDGCVVSMPVLVALGLLLTGYTVALCWKK 235
>gi|294462093|gb|ADE76599.1| unknown [Picea sitchensis]
Length = 106
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/89 (62%), Positives = 70/89 (78%)
Query: 154 MPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGC 213
MPFFL++A+I+L F+TIHTFSMVIAFNGY EG Q FVP VHLVA M+TLVN GGC
Sbjct: 1 MPFFLVAALISLGFLTIHTFSMVIAFNGYDEGKKVHQIFVPTVHLVAAMLTLVNLIPGGC 60
Query: 214 VVGIPLLYILASLILLHCGKMVWRRLTAS 242
V G+PL+ A++ LL+CGK+VW+R+ S
Sbjct: 61 VAGVPLILCSAAVTLLYCGKLVWKRIIDS 89
>gi|289743165|gb|ADD20330.1| gamma-secretase subunit Aph-1 [Glossina morsitans morsitans]
Length = 239
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 112/207 (54%), Gaps = 9/207 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G ++IA GP L+LF I+ P I+ ++ + WL+SL+ S +W A +PL+
Sbjct: 1 MTMPEFFGCSMIAFGPPLALFTFTIANDPIRIIILIVAAFFWLVSLLASSIVWYAIVPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
A ++ SV FQEG R + +++ +R E L A+ R+ + +K +A
Sbjct: 61 KF----LAFGVVFSVLFQEGFRYIIYRILRRTEQGLQVVAE---DTRV-IENKHILAYVS 112
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
G G G+ A+F +++L +GPAT + ++ FFL+S+ AL+ +HTF VI +N
Sbjct: 113 GFGFGIISAMFALVNVLADMWGPATLGLKGGSEV-FFLVSSAQALSICLLHTFWSVIFYN 171
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVN 207
+ N +V H+V ++TL+N
Sbjct: 172 AFDTNNYMHIVYVITTHMVVSLITLLN 198
>gi|427782603|gb|JAA56753.1| Putative conserved membrane protein [Rhipicephalus pulchellus]
Length = 256
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 119/227 (52%), Gaps = 15/227 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ IG ALI GP+LS+F I++ P I+ ++++ WL+SL++ S +W A +PL+
Sbjct: 1 MTLMEFIGCALIGFGPALSMFAITIARDPIRIIILITAAFFWLLSLLLSSIVWFAVVPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
A ++ SV FQE R LF++V ++ E L + + + + ++
Sbjct: 61 KQ----LAFGVVCSVAFQEAGRFLFYRVLRKAELGLKKVTEVGADGAVVSSSRTTLSYVS 116
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG GV VF L++L A GP T ++ FFL SA+ AFV +HTF V++F+
Sbjct: 117 GLGFGVMSGVFSLLNVLADAIGPGTVGLNGGSSC-FFLTSALTTSAFVLLHTFWGVVSFH 175
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLI 227
G FV + HLVA +TL+N P Y +ASL+
Sbjct: 176 ALDHGRWPLVAFVGIAHLVASCLTLLN----------PAGYYVASLV 212
>gi|440793706|gb|ELR14883.1| Gammasecretase subunit APH-1B, putative [Acanthamoeba castellanii
str. Neff]
Length = 249
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 121/234 (51%), Gaps = 15/234 (6%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWW-- 65
G ALIA GP+L+LF I+ L++ ++ S+ WL+S+++ S +W +PL++ W+
Sbjct: 8 GCALIAFGPALALFWMFIAPSAQLVVLMVGSSFFWLLSILLTSILWYVLVPLRTHYWFIV 67
Query: 66 PFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFAD-RVGKPRLFLTDKMQIALAGGLGH 124
PFA+L+ QE +R F+K+Y + + + V P D +LA GLG
Sbjct: 68 PFAVLL------QEAMRWAFYKLYAKAQKAFTGGSSPNVAVPHAL--DYFSASLAIGLGF 119
Query: 125 GVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAE 184
G H V S+L A GP + Y CP + FL+SA+ ALAF+T+H V++F+ Y
Sbjct: 120 GFTHGVVMYGSVLASANGPGSLYAPACPSVSLFLLSAVFALAFITMHVLLSVLSFDAYKV 179
Query: 185 GNTTDQYFVPVV----HLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKM 234
V H V ++TL+N G CV L+Y+ +++ L ++
Sbjct: 180 TEWRPFLIKTGVMAGGHFVISLLTLLNQEGGSCVASAVLVYLALAVLALFTARV 233
>gi|332376238|gb|AEE63259.1| unknown [Dendroctonus ponderosae]
Length = 240
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 114/207 (55%), Gaps = 8/207 (3%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV G A +A GP +++F+ I + P I+ ++++ WL+SL++ S +W A +PL+
Sbjct: 1 MTVREFFGCAFLAFGPPVAMFLFTIVQDPVRIIILIAAAFFWLVSLLLSSLLWFAVVPLQ 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+ +I SV FQEG R + +++ ++ E+ L + + + +K +A
Sbjct: 61 KHLLFG----MICSVLFQEGFRYIIYRILRKAENGLMKITEDSAR---LIDNKHILAYVS 113
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG G+ F +++L A GPAT + +M FFL SA AL+F+ +HTF V+ FN
Sbjct: 114 GLGFGIISGAFSLINVLADAVGPATMGLKAGNEM-FFLSSAATALSFILLHTFWSVLFFN 172
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVN 207
G+ N +V V HL+A +T+ N
Sbjct: 173 GFDNNNRIQVGYVIVAHLLASGLTMFN 199
>gi|58391850|ref|XP_318923.2| AGAP009816-PA [Anopheles gambiae str. PEST]
gi|55236032|gb|EAA14158.3| AGAP009816-PA [Anopheles gambiae str. PEST]
Length = 239
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 109/213 (51%), Gaps = 14/213 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV G + +A GP +++F I+ P I+ +++++ WL+SL++ S +W AF P+
Sbjct: 1 MTVVEFFGCSFLAFGPPVAMFALTIAHDPIRIIILIAASFFWLVSLLLSSTVWLAFHPVT 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFAD--RVGKPRLFLTDKMQIAL 118
S + +I SV QEG R L +KV ++ E L D R+ R L+
Sbjct: 61 SKVTFG----LICSVFIQEGFRYLMYKVLRKTESGLQEVTDIVRIADYRHILS------Y 110
Query: 119 AGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIA 178
A GLG G+ F +++L + GPAT + + F LISA +LA + +HTF VI
Sbjct: 111 ASGLGFGIISGAFSLVNILADSVGPATVGLKAASDI-FMLISAAQSLAMILLHTFWSVIF 169
Query: 179 FNGYAEGNTTDQYFVPVVHLVAGMVTLVNFASG 211
FN N +V HL +TL+N ASG
Sbjct: 170 FNACDVKNYYHIGYVVASHLFVSCMTLLN-ASG 201
>gi|301094294|ref|XP_002896253.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109648|gb|EEY67700.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 247
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 8/231 (3%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPF 67
G L+ +GP +LF V++K+ L++ LS +WL++++V + +W+ PLK++
Sbjct: 15 GCILVGIGPLAALFFVVVAKRAQLVILALSGAFVWLVAILVTATLWQIIPPLKTS----L 70
Query: 68 ALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVA 127
+ + V QE R+LF+ +Y R E + +L L D + +LAGG+G V
Sbjct: 71 SATVPVGVVIQEAFRLLFFYLYTRTEQAVKRVTT--SSHQLPLND-ITSSLAGGVGFSVM 127
Query: 128 HAVFFCLSLLTPAFGP-ATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGN 186
HA+ SL+ + G + C +P +AI LA + MV+AF+GY + +
Sbjct: 128 HALLMFGSLVGSSTGSRGAAFSASCESIPLIFSAAISTLALTALDVALMVVAFDGYRKRS 187
Query: 187 TTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWR 237
V V+H+ + L N + GC + IP Y A+L +VWR
Sbjct: 188 ALAVGAVFVIHMGVALSALANMETNGCYISIPAHYAGAALACAGATMIVWR 238
>gi|348687601|gb|EGZ27415.1| hypothetical protein PHYSODRAFT_471038 [Phytophthora sojae]
Length = 247
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 107/215 (49%), Gaps = 8/215 (3%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPF 67
G L+ GP +LF V++K+ L++ LS +WL++++V + +W+ PLK++
Sbjct: 15 GSILVGFGPLAALFFVVVAKRAQLVILALSGAFVWLVAILVTATLWQIIPPLKTS----L 70
Query: 68 ALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVA 127
+ + V QE R+LF+ +Y R E + +L L D + +LAGG+G V
Sbjct: 71 SATVPVGVVVQEAFRLLFFYLYTRTELAVKRVT--TSSHQLPLND-ITSSLAGGVGFSVM 127
Query: 128 HAVFFCLSLLTPAFGP-ATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGN 186
HA+ SL+ + G + C +P +AI LA + MV+AF+GY + +
Sbjct: 128 HALLMFGSLVGSSTGSRGAAFSASCESIPLVFSAAISTLALTALDVALMVVAFDGYRKRS 187
Query: 187 TTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLY 221
V V+H+ + L N + GC + IP+ Y
Sbjct: 188 ALAVGAVFVIHMGVALSALANMNTNGCYISIPVHY 222
>gi|312370866|gb|EFR19176.1| hypothetical protein AND_22955 [Anopheles darlingi]
Length = 239
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+A G + +A GP ++F I+ P I+ +++++ WL+SL++ S +W A P
Sbjct: 1 MTLAEFYGCSFLAFGPPAAMFALTIAHDPIRIIILIAASFFWLVSLLLSSIVWFATYPFD 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFAD--RVGKPRLFLTDKMQIAL 118
S L ++ SV QE R L +KV ++ E+ L D R+ R L+
Sbjct: 61 SRQ----ILALLCSVLIQETFRFLMYKVLRKTENGLQEVTDIVRIADYRHILS------Y 110
Query: 119 AGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIA 178
A GLG G+ F +++L + GPAT + R F L+SA +LA + HTF VI
Sbjct: 111 ATGLGFGIISGAFSLVNILADSVGPATVGL-RAGSDVFMLVSAAQSLAMILFHTFWGVIF 169
Query: 179 FNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
F+ N +V HL +TL+N
Sbjct: 170 FHSLDVKNYKYAAYVVASHLFVSAITLLN 198
>gi|91083047|ref|XP_966461.1| PREDICTED: similar to anterior pharynx defective 1 CG2855-PA
[Tribolium castaneum]
gi|270007655|gb|EFA04103.1| hypothetical protein TcasGA2_TC014338 [Tribolium castaneum]
Length = 240
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 118/237 (49%), Gaps = 13/237 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G +A GP ++FV I+ P I+ ++++ WL+SL++ S W +PL+
Sbjct: 1 MTLVEFFGCTFLAFGPPFAMFVFTIAHDPVRIIILIAAAFFWLVSLLLSSLWWYIVVPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
A ++ SV FQE R + +K+ ++ E+ L D + + +K +A
Sbjct: 61 Q----DLAFGVVFSVFFQETFRYIIYKILRKAENGLKKITDDSTQ---LIENKHILAYVS 113
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG G+ F +++L A GP T + +M FFL SA L F +HTF VI FN
Sbjct: 114 GLGFGIISGAFSLVNILADAVGPGTMGLKGGNEM-FFLTSAATGLCFTLLHTFWGVIFFN 172
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWR 237
N V V HL++ +TL+NF G IPL + +L+L+ G M +R
Sbjct: 173 ALDNSNKCYVGVVVVSHLLSSCITLLNFKVGPAGTLIPLYF---NLVLM--GLMAYR 224
>gi|157128581|ref|XP_001655139.1| gamma-secretase subunit aph-1 [Aedes aegypti]
gi|108882203|gb|EAT46428.1| AAEL002389-PA [Aedes aegypti]
Length = 239
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 102/208 (49%), Gaps = 11/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV G + +A GP L++F I+ P I+ +++++ WL+SL+ S +W PL+
Sbjct: 1 MTVVEFFGCSFLAFGPPLAMFSLTIAHDPIRIIILIAASFFWLVSLLFSSTVWFTVYPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALA 119
A +I SV QE R L +K+ ++ E L + V ++D I +
Sbjct: 61 D----KIAFGLICSVFIQEAFRYLMYKLLRKTERGLQEVTEIVR-----ISDYKHILSYV 111
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G+ F +++L + GPAT + + F +ISA +L + +HTF VI F
Sbjct: 112 CGLGFGIISGAFSLVNILADSVGPATVGLKAGSNI-FIVISAAQSLCMILLHTFWSVIFF 170
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
N N +V V HL +TL+N
Sbjct: 171 NACDLKNYYHIGYVVVSHLFVSCITLLN 198
>gi|194855000|ref|XP_001968460.1| GG24882 [Drosophila erecta]
gi|190660327|gb|EDV57519.1| GG24882 [Drosophila erecta]
Length = 238
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP +LFV I+ P I+ ++++ WL+SL++ S +W A +PLK
Sbjct: 1 MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLISS-LWYALIPLK 59
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALA 119
A ++ SV FQEG R + +++ + E L A A+ +TD I A
Sbjct: 60 EF----LAFGVVFSVCFQEGFRYIIYRILRSTEQGLHAVAEDTR-----VTDNKHILAYV 110
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G+ +F +++L GP T + ++ FF+ SA AL+ + +HTF VI F
Sbjct: 111 SGLGFGIISGMFALVNVLADMSGPGTMGLKGGTEL-FFVTSAAQALSIILLHTFWSVIFF 169
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
N + N +V HL ++TL+N
Sbjct: 170 NAFDTNNYIHIGYVVGSHLFVSLITLLN 197
>gi|195470857|ref|XP_002087723.1| GE18179 [Drosophila yakuba]
gi|194173824|gb|EDW87435.1| GE18179 [Drosophila yakuba]
Length = 238
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 107/208 (51%), Gaps = 12/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP +LFV I+ P I+ ++++ WL+SL++ S +W A +PLK
Sbjct: 1 MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLISS-LWYALIPLK 59
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALA 119
A ++ SV FQEG R + +++ + E L A A+ +TD I A
Sbjct: 60 EF----LAFGVVFSVCFQEGFRYIIYRILRSTEQGLHAVAEDTR-----VTDNKHILAYV 110
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G+ +F +++L GP T + ++ FF+ SA AL+ + +HTF VI F
Sbjct: 111 SGLGFGIISGMFALVNVLADMSGPGTMGLKGGTEL-FFVTSAAQALSIILLHTFWSVIFF 169
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
N + N +V HL ++TL+N
Sbjct: 170 NAFDTNNYIHIGYVVGSHLFVSLITLLN 197
>gi|307108179|gb|EFN56420.1| hypothetical protein CHLNCDRAFT_145022 [Chlorella variabilis]
Length = 283
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 7/241 (2%)
Query: 7 IGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWP 66
+G L+ P ++ I K FL+L L S WL++L ++S ++RA+ PL ++ P
Sbjct: 7 LGLFLLGCSPLAAVGSVCIFPKSFLLLLALGSAFFWLLTLFLISALFRAWAPLPASPG-P 65
Query: 67 FALLIISSVGFQEGLRVLFWKVYKRLEDT------LDAFADRVGKPRLFLTDKMQIALAG 120
+A L++ +V QE RV W+ +++ + L A G L D+ +AL
Sbjct: 66 YAALVLVAVLVQELARVGIWRFHRQAAGSVLSVRVLQRIAAEQGDAPLSAADRASLALTH 125
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GL H H+ FF L+ L + G T Y CP M +FL+ A+ L + MV+ F+
Sbjct: 126 GLSHAAVHSAFFFLAWLPLSLGDGTIYSPHCPHMSYFLVGALSTLGLAALLAGGMVLFFD 185
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRRLT 240
G VP+ H A ++TL+N A GGC+V +PLL + + ++ W+R T
Sbjct: 186 GLERREVGRAAAVPMAHAAAALLTLLNLADGGCMVSMPLLLAGGGGVAAYAARVWWQRTT 245
Query: 241 A 241
+
Sbjct: 246 S 246
>gi|195386856|ref|XP_002052120.1| GJ17382 [Drosophila virilis]
gi|194148577|gb|EDW64275.1| GJ17382 [Drosophila virilis]
Length = 239
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 107/207 (51%), Gaps = 9/207 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP +LFV I+ P I+ ++++ WL+SL++ S +W A +PL+
Sbjct: 1 MTLPELFGCTFIAFGPPFALFVFSIANDPVRIIILIAAAFFWLLSLLLSSLLWFAVVPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
A ++ SV FQE R + +++ + E L A A+ R+ +K +A
Sbjct: 61 DV----LAFGVVFSVLFQECFRYIIYRILRSTEQGLHAVAE---DTRI-TENKHILAYVS 112
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG G+ +F +++L GP T + + FF+ SA AL+ + +HTF +I FN
Sbjct: 113 GLGFGIISGMFALVNVLADMSGPGTMGLKGGTDL-FFMTSAAQALSIILLHTFWSIIFFN 171
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVN 207
+ N +V V HL ++TL+N
Sbjct: 172 AFDTNNYLHIGYVVVTHLFVSLLTLLN 198
>gi|170029264|ref|XP_001842513.1| gamma-secretase subunit Aph-1 [Culex quinquefasciatus]
gi|167881616|gb|EDS44999.1| gamma-secretase subunit Aph-1 [Culex quinquefasciatus]
Length = 239
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 103/209 (49%), Gaps = 13/209 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV G + +A GP +++F I+ P I+ +++++ WL+SL++ S +W A PL+
Sbjct: 1 MTVVEFFGCSFLAFGPPVAMFALTIAHDPIRIIILIAASFFWLVSLLLSSTVWFAVFPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFAD--RVGKPRLFLTDKMQIAL 118
+ +I SV QEG R L +K+ ++ E L + R+ + L+
Sbjct: 61 DKLVFG----LICSVFIQEGFRYLMYKLLRKTERGLQEVTEIARISDYKHILS------Y 110
Query: 119 AGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIA 178
GLG G+ F +++L + GPAT + + F LISA +L + +HTF VI
Sbjct: 111 VSGLGFGIISGAFSLVNILADSVGPATVGL-KAGSSVFILISAAQSLCMILLHTFWSVIF 169
Query: 179 FNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
F+ N +V HL +TL+N
Sbjct: 170 FSACDVKNYYHIGYVVTSHLFVSCMTLLN 198
>gi|20129183|ref|NP_608710.1| anterior pharynx defective 1, isoform A [Drosophila melanogaster]
gi|442625559|ref|NP_001259963.1| anterior pharynx defective 1, isoform B [Drosophila melanogaster]
gi|37077998|sp|Q9VQG2.1|APH1_DROME RecName: Full=Gamma-secretase subunit Aph-1; AltName:
Full=Presenilin-stabilization factor
gi|7295913|gb|AAF51212.1| anterior pharynx defective 1, isoform A [Drosophila melanogaster]
gi|15291627|gb|AAK93082.1| LD12037p [Drosophila melanogaster]
gi|24637560|gb|AAN63815.1| presenilin stabilization factor [Drosophila melanogaster]
gi|220942752|gb|ACL83919.1| aph-1-PA [synthetic construct]
gi|220952974|gb|ACL89030.1| aph-1-PA [synthetic construct]
gi|440213230|gb|AGB92500.1| anterior pharynx defective 1, isoform B [Drosophila melanogaster]
Length = 238
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP +LFV I+ P I+ ++++ WL+SL++ S +W A +PLK
Sbjct: 1 MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLISS-LWYALIPLK 59
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALA 119
A ++ SV FQE R + +++ + E L A A+ +TD I A
Sbjct: 60 EF----LAFGVVFSVCFQEAFRYIIYRILRSTEQGLHAVAEDTR-----VTDNKHILAYV 110
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G+ +F +++L GP T + ++ FF+ SA AL+ + +HTF VI F
Sbjct: 111 SGLGFGIISGMFALVNVLADMSGPGTMGLKGGTEL-FFVTSAAQALSIILLHTFWSVIFF 169
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
N + N +V HL ++TL+N
Sbjct: 170 NAFDTNNYIHIGYVVFSHLFVSLITLLN 197
>gi|195117680|ref|XP_002003375.1| GI17881 [Drosophila mojavensis]
gi|193913950|gb|EDW12817.1| GI17881 [Drosophila mojavensis]
Length = 239
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/207 (30%), Positives = 105/207 (50%), Gaps = 9/207 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G LIA G +LFV I+ I+ ++++ WL+SL++ S +W A +PL+
Sbjct: 1 MTLPEFFGCTLIAFGTPFALFVFTIANDSMRIIILIAAAFFWLLSLLLSSMLWFAIVPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
A ++ SV FQE R + +++ + E L A A+ +K +A
Sbjct: 61 DV----LAFGVVFSVLFQECFRYIIYRILRSTEHALHAVAEDTRMTE----NKHILAYVS 112
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG G+ +F +++L GP T + +M FF+ SA+ L+ V +HTF VI FN
Sbjct: 113 GLGFGIISGLFALVNVLADMTGPGTMGLKGGSEM-FFVTSAVQVLSIVLLHTFWSVIFFN 171
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVN 207
+ N ++V HL ++TL+N
Sbjct: 172 AFDTNNYLHIFYVVGSHLFVSLLTLLN 198
>gi|194770521|ref|XP_001967341.1| GF13892 [Drosophila ananassae]
gi|190618103|gb|EDV33627.1| GF13892 [Drosophila ananassae]
Length = 239
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 105/208 (50%), Gaps = 11/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP +LFV I+ P I+ ++++ WL+SL++ S +W A +PL+
Sbjct: 1 MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLLSSLLWFAMIPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALA 119
A + SV FQE R + +++ + E L A A+ +TD I A
Sbjct: 61 DV----LAFGVFFSVLFQECFRYIIYRILRSTEQGLHAVAEDTR-----VTDNKHILAYV 111
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G+ +F +++L GP T + ++ FF+ SA AL+ + +HTF VI F
Sbjct: 112 SGLGFGIISGMFALVNVLADMSGPGTMGLKSGTEI-FFITSAAQALSIILLHTFWSVIFF 170
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
N + N +V HL ++TL+N
Sbjct: 171 NAFDTSNYLHICYVVGSHLFVSLLTLLN 198
>gi|195576137|ref|XP_002077933.1| GD23180 [Drosophila simulans]
gi|194189942|gb|EDX03518.1| GD23180 [Drosophila simulans]
Length = 238
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 12/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP +LFV I+ P I+ ++++ WL+SL++ S +W A +PLK
Sbjct: 1 MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLISS-LWYALIPLK 59
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALA 119
A ++ SV FQE R + +++ + E L A A+ +TD I A
Sbjct: 60 EF----LAFGVVFSVCFQEAFRYIIYRILRSTEQGLHAVAEDTR-----VTDNKHILAYV 110
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G+ +F +++L GP T + ++ FF+ SA AL+ + +HTF VI F
Sbjct: 111 SGLGFGIISGMFALVNVLADMSGPGTMGLKGGTEL-FFVTSAAQALSIILLHTFWSVIFF 169
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
N + N +V HL ++TL+N
Sbjct: 170 NAFDTNNYIHIGYVVGSHLFVSLITLLN 197
>gi|325187992|emb|CCA22534.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 245
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/215 (31%), Positives = 106/215 (49%), Gaps = 9/215 (4%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPF 67
G L A GP +LF +I K+ LI+ L+S +WLIS+++ + IW+ LKS+
Sbjct: 15 GCILTAYGPIATLFFILIGKRAQLIIIALTSAFIWLISVLISATIWQIIPVLKSSAEATI 74
Query: 68 ALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVA 127
+ I+ QE R ++++Y R + K +L L D +LA G+G+ +
Sbjct: 75 CVTIL----IQEIGRYTYFQLYSRGVVAIQKVTTT--KHQLPLND-FTSSLASGVGYSLM 127
Query: 128 HAVFFCLSLLTPAFG-PATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGN 186
H++ ++L + G + D C +P AI +LA MV+AF GY N
Sbjct: 128 HSLMVYGTVLGSSTGFRGAAFRDYC-TLPVVFTGAITSLALSISDVALMVMAFAGYRSRN 186
Query: 187 TTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLY 221
+ V V+HL G+ L NF S GCV+ IP+ Y
Sbjct: 187 WSIICMVLVLHLGIGLSALANFKSNGCVISIPIHY 221
>gi|195052487|ref|XP_001993308.1| GH13737 [Drosophila grimshawi]
gi|193900367|gb|EDV99233.1| GH13737 [Drosophila grimshawi]
Length = 239
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 107/209 (51%), Gaps = 13/209 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP +LFV I+ P I+ ++++ WL+SL++ S +W A +PL+
Sbjct: 1 MTLPEFFGCTFIAFGPPFALFVFSIANDPVRIIILIAAAFFWLLSLLLSSLLWFAAVPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFAD--RVGKPRLFLTDKMQIAL 118
++ SV FQE R + +++ + E L A A+ RV + +K +A
Sbjct: 61 DV----LVFGVVFSVLFQECFRYIIYRILRSTEQGLHAVAEDTRVTE------NKHILAY 110
Query: 119 AGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIA 178
GLG G+ A+F +++L GP T + + FF+ SA AL+ V +HTF +I
Sbjct: 111 VSGLGFGIISAMFALVNVLADMSGPGTMGLKGGSEF-FFITSAAQALSIVLLHTFWSIIF 169
Query: 179 FNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
FN + N +V HL ++TL+N
Sbjct: 170 FNAFDTNNYVHIGYVVGTHLFVSLLTLLN 198
>gi|195437344|ref|XP_002066600.1| GK24580 [Drosophila willistoni]
gi|194162685|gb|EDW77586.1| GK24580 [Drosophila willistoni]
Length = 239
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP +LF+ I P I+ ++++ WL+SL++ S +W A +PL+
Sbjct: 1 MTLPEFFGCTFIAFGPPFALFIFTIGHDPVRIIILIAAAFFWLLSLLLSSLLWFAVIPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALA 119
A +I SV FQE R + +++ + E L A A+ +TD I A
Sbjct: 61 DV----LAFGVIFSVIFQECFRYIIYRILRSTEQGLHAVAEDTR-----VTDNKHILAYV 111
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G+ +F +++L GP T + + FF+ SA AL+ + +HTF VI F
Sbjct: 112 SGLGFGIISGMFALVNVLADMSGPGTMGLKGGSEF-FFITSAAQALSIILLHTFWSVIFF 170
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
N + N +V HL ++TL+N
Sbjct: 171 NAFDTNNYLHIGYVVGSHLFVSLLTLLN 198
>gi|195161420|ref|XP_002021566.1| GL26582 [Drosophila persimilis]
gi|194103366|gb|EDW25409.1| GL26582 [Drosophila persimilis]
Length = 239
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP +LFV I+ P I+ ++++ WL+SL++ S +W A +PL+
Sbjct: 1 MTLPEFFGCTFIAFGPPFALFVFTIANDPLRIIILIAAAFFWLLSLLLSSLLWFAMIPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALA 119
A + SV FQE R + +++ + E L A A+ +TD I +
Sbjct: 61 DV----LAFGVFFSVVFQECFRYIIYRILRSTEQGLQAVAEDTR-----VTDNKHILSYV 111
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G+ +F +++L GP T + ++ FF+ SA AL+ + +HTF VI F
Sbjct: 112 SGLGFGIISGMFALVNVLADMSGPGTMGLQSGTEL-FFVTSAAQALSIILLHTFWSVIFF 170
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
N N +V HL ++TL+N
Sbjct: 171 NACDTNNYLHIAYVVGSHLFVSLLTLLN 198
>gi|443723977|gb|ELU12195.1| hypothetical protein CAPTEDRAFT_204741 [Capitella teleta]
Length = 249
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 110/214 (51%), Gaps = 16/214 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP +LF+ I+ +P ++ +++S WL+SL++ S W +PL+
Sbjct: 1 MTLMEFFGCTFIAFGPPAALFILTIANEPLRVIVLIASAFFWLLSLLLSSIWWYIVIPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADR-VGKPRL--FLTDKMQIA 117
A ++ SV FQE R+LF+ + + + L F + G + + + +A
Sbjct: 61 EEI----AFGLVFSVIFQEIFRLLFYVLLGKAAEGLKTFCQQGEGDTNMLSLVNHRHLMA 116
Query: 118 LAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVI 177
GLG+G+ F +++L GP T + PQ FFL SA + L V +HTF +I
Sbjct: 117 YVCGLGYGMVCGTFSLVNILADMAGPGTIGIYGDPQ-NFFLASAFMTLCMVLLHTFWGII 175
Query: 178 AFNGYAEGNTTDQYFVPVV----HLVAGMVTLVN 207
F+G+ T +Y+ P+V HL+ +TL+N
Sbjct: 176 FFDGF----YTKKYYQPIVVVLSHLLVSCLTLLN 205
>gi|195342073|ref|XP_002037626.1| GM18364 [Drosophila sechellia]
gi|194132476|gb|EDW54044.1| GM18364 [Drosophila sechellia]
Length = 238
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP +LFV I+ P I+ ++++ WL+SL++ S +W A +PLK
Sbjct: 1 MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLISS-LWYALIPLK 59
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALA 119
A ++ SV FQE R + +++ + E L A A+ +TD I A
Sbjct: 60 EF----LAFGVVFSVCFQEAFRYIIYRILRSTEQGLHAVAEDTR-----VTDNKHILAYV 110
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G+ +F +++L GP T + ++ FF+ SA AL+ + +HTF VI F
Sbjct: 111 SGLGFGIISGMFALVNVLADMSGPGTMGLKGGTEL-FFVTSAAQALSIILLHTFWSVIFF 169
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
N N +V HL ++TL+N
Sbjct: 170 NALDTNNYIHIGYVVGSHLFVSLITLLN 197
>gi|125984472|ref|XP_001356000.1| GA15487 [Drosophila pseudoobscura pseudoobscura]
gi|54644318|gb|EAL33059.1| GA15487 [Drosophila pseudoobscura pseudoobscura]
Length = 239
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP +LFV I+ P I+ ++++ WL+SL++ S +W A +PL+
Sbjct: 1 MTLPEFFGCTFIAFGPPFALFVFTIANDPVRIIILIAAAFFWLLSLLLSSLLWFAMIPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALA 119
A + SV FQE R + +++ + E L A A+ +TD I +
Sbjct: 61 DV----LAFGVFFSVVFQECFRYIIYRILRSTEQGLQAVAEDTR-----VTDNKHILSYV 111
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G+ +F +++L GP T + ++ FF+ SA AL+ + +HTF VI F
Sbjct: 112 SGLGFGIISGMFALVNVLADMSGPGTMGLQSGTEL-FFVTSAAQALSIILLHTFWSVIFF 170
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
N N +V HL ++TL+N
Sbjct: 171 NACDTNNYLHIAYVVGSHLFVSLLTLLN 198
>gi|240995046|ref|XP_002404570.1| anterior pharynx defective, putative [Ixodes scapularis]
gi|215491592|gb|EEC01233.1| anterior pharynx defective, putative [Ixodes scapularis]
Length = 255
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 107/207 (51%), Gaps = 5/207 (2%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G LIA GP+LS+F +++ P I+ ++++ WL++L++ S +W A +PL+
Sbjct: 1 MTLMEFFGCTLIAFGPALSMFAITVARDPIRIIILITAAFFWLLALLLSSILWFAAVPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
A ++ SV FQE R LF+K+ ++ E L + T + ++
Sbjct: 61 K----ELAFGVVFSVFFQEAFRYLFYKILRKAEVGLKKVTEVGADGASVSTSRTTLSYVA 116
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG G+ VF L++L A GP T + FF+ SA+ AFV +HTF V++F+
Sbjct: 117 GLGFGIMSGVFSLLNVLADATGPGTVGLHGGSPY-FFVTSALTTQAFVLLHTFWGVVSFH 175
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVN 207
G FV HL A +TL+N
Sbjct: 176 ALDHGRWPLVGFVLACHLTASTLTLLN 202
>gi|195996159|ref|XP_002107948.1| hypothetical protein TRIADDRAFT_19466 [Trichoplax adhaerens]
gi|190588724|gb|EDV28746.1| hypothetical protein TRIADDRAFT_19466 [Trichoplax adhaerens]
Length = 252
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 11/203 (5%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWR-AFLPLKSTTWWP 66
GY IA GPSL++F I+ I+ + +S WL+SL+ S IW+ F LK
Sbjct: 8 GYTFIAFGPSLAIFTMTIADDATQIIIMFTSAFFWLVSLLFSSIIWQIPFSDLKLRLGIS 67
Query: 67 FALLIISSVGFQEGLRVLFWKVYKRLEDTLDAF--ADRVGKPRLFLTDKMQIALAGGLGH 124
AL V QE R LF+ + K+ + L + + + + R K +IA G G
Sbjct: 68 VAL----CVAIQELFRYLFYLLMKKADKGLLSITTSSTISQTR---QRKHKIAYVAGFGF 120
Query: 125 GVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAE 184
GV F ++LL A GP T + + FFL SAI F+ ++ F VI F+G+ +
Sbjct: 121 GVMSGAFSVVNLLATASGPGTVGIKGNSDL-FFLSSAIFTSIFILLNIFWSVIIFDGFDK 179
Query: 185 GNTTDQYFVPVVHLVAGMVTLVN 207
N +V H + ++TLVN
Sbjct: 180 RNWKKIAYVFATHELTSLLTLVN 202
>gi|156379917|ref|XP_001631702.1| predicted protein [Nematostella vectensis]
gi|156218746|gb|EDO39639.1| predicted protein [Nematostella vectensis]
Length = 243
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 103/207 (49%), Gaps = 10/207 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP+L++F I+ ++ +++S WL+SL++ S W PLK
Sbjct: 1 MTLMVFFGCTFIAFGPALAMFSLTIAGDAQQVIVLIASAFFWLLSLLISSIWWMVVSPLK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
A + SV FQE R ++K+ ++ ++ L + + R K +IA
Sbjct: 61 D----ELAFGMTFSVLFQELFRFAYFKIIRKADEGLLSMINNQSPLR-----KHRIAYVA 111
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG+G+ +F +++L GP + + Q F ++SA + FV ++TF VI F+
Sbjct: 112 GLGYGLMSGLFAMVNVLADISGPGSIGLHGNAQ-NFLIVSAFLTSCFVLLNTFWGVIWFD 170
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVN 207
G+ + + V HL ++TL+N
Sbjct: 171 GWENKKWLNVFVVVASHLFVSLMTLLN 197
>gi|391339645|ref|XP_003744158.1| PREDICTED: gamma-secretase subunit Aph-1-like [Metaseiulus
occidentalis]
Length = 260
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 110/219 (50%), Gaps = 20/219 (9%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M +A G +L+A GPSLS+F I+ P ++ +++ WL+SL+ S +W + L +
Sbjct: 1 MGLAEFFGCSLVAFGPSLSMFCVTIAACPIRVIIFITAAFFWLVSLLFSSIVWCSVLEIF 60
Query: 60 ------KSTTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDK 113
+ + + F LL+ +V FQE R LF+ + +R ++ L + VG ++D
Sbjct: 61 RIRTSEEKSNFVVFGLLV--AVAFQELFRYLFYGILRRADNGLKKMVE-VGSTGSVVSDS 117
Query: 114 MQ-IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFF-LISAIIALAFVTIH 171
Q +A GLG G F L++L GPA+ V Q +F L+S++ FV ++
Sbjct: 118 RQLLAYVAGLGFGTMSGGFSLLNVLAEIGGPAS--VGYGGQSEWFVLVSSVTTSLFVILN 175
Query: 172 TFSMVIAFNGYAEGNTTDQYFV---PVVHLVAGMVTLVN 207
T VI F+GY +T D + H V ++TL N
Sbjct: 176 TCWGVILFHGY---DTRDHRLIIGAIASHFVCSLMTLFN 211
>gi|340713041|ref|XP_003395060.1| PREDICTED: LOW QUALITY PROTEIN: gamma-secretase subunit Aph-1-like
[Bombus terrestris]
gi|350419685|ref|XP_003492268.1| PREDICTED: gamma-secretase subunit Aph-1-like [Bombus impatiens]
Length = 238
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 10/207 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV G A +A GP L++F ++ +P I+ +++S WLISL++ S +W A +PL+
Sbjct: 1 MTVMDFFGCAFLAFGPPLAMFTFTVAAEPIRIIILIASAFFWLISLLLSSVLWYAVVPLQ 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+ A ++ SV FQE R L + V ++ E L D+V + + A
Sbjct: 61 N----HLAFGLVFSVLFQEAFRYLLYWVLRKAERGL----DKVTTTHV-ADSRHVFAYVC 111
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG G VF +++L A GP T + + + FF+ISA L F+ +HTF V+ F+
Sbjct: 112 GLGFGFMSGVFALVNVLADAVGPGTMGLRQGTEY-FFIISAATTLCFILLHTFWGVVFFS 170
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVN 207
N +V HL +TL+N
Sbjct: 171 ALDRKNWGQVIWVVGSHLFVSCMTLLN 197
>gi|156551235|ref|XP_001605777.1| PREDICTED: gamma-secretase subunit Aph-1-like [Nasonia vitripennis]
Length = 238
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 111/208 (53%), Gaps = 12/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV G AL+A GP L++F I+ +P I+ +++S WLISL++ S +W A +PL+
Sbjct: 1 MTVMDFFGCALLAFGPPLAMFTFTIAIEPIRIIILIASAFFWLISLLLSSTLWYAIVPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALA 119
S ++ +I SV FQE R L +KV ++ E L ++V + D I A
Sbjct: 61 SY----LSIGLIYSVVFQEIFRFLLYKVLRKAEKGL----EKVTTAH--VADSRDIFAYV 110
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G+ F C+++L A GP T + + + FF+ISA L F+ +HTF VI F
Sbjct: 111 CGLGFGLMSGAFACVNVLADAMGPGTMGLHQGNEY-FFMISAATTLCFILLHTFWGVIFF 169
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
+ N +V HL A +TL+N
Sbjct: 170 SALDNKNWFQITWVVGSHLFASAMTLLN 197
>gi|320162875|gb|EFW39774.1| hypothetical protein CAOG_00299 [Capsaspora owczarzaki ATCC 30864]
Length = 235
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 108/232 (46%), Gaps = 8/232 (3%)
Query: 7 IGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWP 66
+G ALIA P L L + +++ L++ ++ S WL+S++V S +W P++ W
Sbjct: 7 LGIALIAFSPVLVLVLLTVAQSAELVVLLVCSAFFWLLSILVTSILWFIISPIRDAYVWA 66
Query: 67 FALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGV 126
I +V QE R ++V KR E L AD RL ++A GLG G+
Sbjct: 67 ----IFLAVALQEVGRWATYRVLKRAEPGLLKVAD-FANSRLV---HHRLAYVSGLGFGI 118
Query: 127 AHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGN 186
A+ +L+ A GP C ++L+SA F +H F V+ +G +
Sbjct: 119 MSALIQFNPVLSVATGPGMLPSPGCTGNSYYLVSAFTICCFSLLHVFWHVVFSHGMNTNS 178
Query: 187 TTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMVWRR 238
VP+ HL A ++TL+N + C + LYI +L C +++ +R
Sbjct: 179 KVLVAIVPIAHLAASLLTLINESGESCAGALVPLYIELALFGFICWRIISKR 230
>gi|328779809|ref|XP_392345.3| PREDICTED: gamma-secretase subunit Aph-1 [Apis mellifera]
Length = 238
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 10/207 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV G A +A GP L++F ++ +P I+ +++S WLISL++ S +W A +PL+
Sbjct: 1 MTVMDFFGCAFLAFGPPLAMFTFTVAAEPIRIIILIASAFFWLISLLLSSILWYAVVPLQ 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+ A ++ SV FQE R L + V ++ E L D+V + + A
Sbjct: 61 N----HLAFGLVFSVLFQEAFRYLLYWVLRKAERGL----DKVTTTHV-ADSRHVFAYVC 111
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG G VF +++L A GP T + + + FF+ISA L F+ +HTF V+ F+
Sbjct: 112 GLGFGFMSGVFALVNVLADAVGPGTMGLRQGTEY-FFVISAATTLCFILLHTFWGVVFFS 170
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVN 207
N +V HL +TL+N
Sbjct: 171 ALDRKNWGQVIWVVGSHLFVSCMTLLN 197
>gi|380011221|ref|XP_003689709.1| PREDICTED: gamma-secretase subunit Aph-1-like [Apis florea]
Length = 238
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 105/207 (50%), Gaps = 10/207 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV G A +A GP L++F ++ +P I+ +++S WLISL++ S +W A +PL+
Sbjct: 1 MTVMDFFGCAFLAFGPPLAMFTFTVAAEPIRIIILIASAFFWLISLLLSSVLWYAVVPLQ 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+ A ++ SV FQE R L + V ++ E L D+V + + A
Sbjct: 61 N----HLAFGLVFSVLFQEAFRYLLYWVLRKAERGL----DKVTTTHV-ADSRHVFAYVC 111
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG G VF +++L A GP T + + + FF+ISA L F+ +HTF V+ F+
Sbjct: 112 GLGFGFMSGVFALVNVLADAVGPGTMGLRQGTEY-FFVISAATTLCFILLHTFWGVVFFS 170
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVN 207
N +V HL +TL+N
Sbjct: 171 ALDRKNWGQVIWVVGSHLFVSCMTLLN 197
>gi|307172012|gb|EFN63606.1| Gamma-secretase subunit Aph-1 [Camponotus floridanus]
Length = 238
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 105/208 (50%), Gaps = 12/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV G A +A GP L++F I+ +P I+ +++S WLISL++ S +W A +PL+
Sbjct: 1 MTVMDFFGCAFLAFGPPLAMFTFTIAAEPIRIIILIASAFFWLISLLLSSILWYAVVPLQ 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALA 119
A ++ SV FQE R L + V ++ E L ++V + D I A
Sbjct: 61 EN----LAFGLVFSVLFQESFRYLLYWVLRKAERGL----EKVTTTH--VADSRHIFAYV 110
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G F +++L A GP T + + + FF+ISA L F+ +HTF VI F
Sbjct: 111 CGLGFGFMSGAFALVNVLADAVGPGTMGLLQGTEY-FFIISAATTLCFILLHTFWGVIFF 169
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
+ + N +V HL +TL+N
Sbjct: 170 SALDKKNWGHIIWVVGTHLFVSCMTLLN 197
>gi|387598141|gb|AFJ91726.1| anterior pharynx defective 1, partial [Ostrea edulis]
Length = 165
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/173 (34%), Positives = 95/173 (54%), Gaps = 13/173 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV G IA GP +LFV I++ P I+ +++S WL+SL+V S +W A +PL+
Sbjct: 1 MTVMEFFGCTFIAFGPPFALFVFTIARDPLRIIVLIASGFFWLLSLLVSSILWYAVVPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGK-----PRLFLTDKMQ 115
T + F SV FQE R+LF+K+ ++ +D L + G+ PR +++K
Sbjct: 61 ETLAFVFF-----SVLFQEAFRLLFYKLLRKADDGLQK-VSQTGQEMHMTPRD-ISNKHI 113
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFV 168
+A GLG G+ F +++L GP T + R FF+++A++ L+FV
Sbjct: 114 MAYVSGLGFGILSGTFSTVNVLADMVGPGTIGI-RGDSKYFFVVTALLTLSFV 165
>gi|332022370|gb|EGI62682.1| Gamma-secretase subunit Aph-1 [Acromyrmex echinatior]
Length = 238
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 103/208 (49%), Gaps = 12/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV G A +A GP L++F+ I+ +P I+ ++ S WLISL++ S +W A +PL+
Sbjct: 1 MTVMDFFGCACLAFGPPLAMFMFTIAAEPIRIIILIVSAFFWLISLLLSSVLWYAVVPLQ 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALA 119
A ++ SV FQE R L + V ++ E L+ + D + A
Sbjct: 61 E----HLAFGLVFSVLFQESFRYLLYWVLRKAERGLEKVTTT------HVADSRHVFAYV 110
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G F +++L A GP T + + + FF+ISA L F+ +HTF VI F
Sbjct: 111 CGLGFGFMSGAFALVNVLADAVGPGTMGLRQGSEY-FFIISAATTLCFILLHTFWGVIFF 169
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
+ N +V HLV +TL+N
Sbjct: 170 YALDKKNWGQIIWVVGSHLVVSCMTLLN 197
>gi|326426628|gb|EGD72198.1| hypothetical protein PTSG_00220 [Salpingoeca sp. ATCC 50818]
Length = 255
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 88/197 (44%), Gaps = 14/197 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A G I L++F V+ + P L++ +++S +WL++ ++ IW PL+
Sbjct: 1 MTQATLWGSLFIIFSMPLAIFWFVVRRSPKLVIVLVASAFMWLLAALLTGIIWIIIPPLQ 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLED---TLDAFADRVGKPRLFLTDKMQIA 117
W +I+ SV QE R FWK+ + E TL D V + ++
Sbjct: 61 DDYW----FVILISVPIQEAFRYFFWKMLHKAEKGLSTLTPDGDVV-------ITREKLW 109
Query: 118 LAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVI 177
GLG GV AV ++L GP CP F ISA+++ A V H F VI
Sbjct: 110 FVSGLGFGVMSAVMMMSNMLDIMTGPGMVPARGCPDFNLFTISALVSAAIVMCHAFWGVI 169
Query: 178 AFNGYAEGNTTDQYFVP 194
A + + + F+P
Sbjct: 170 AGKAWEQRTISKSMFIP 186
>gi|72005939|ref|XP_783542.1| PREDICTED: gamma-secretase subunit APH-1A-like [Strongylocentrotus
purpuratus]
gi|390343125|ref|XP_003725808.1| PREDICTED: gamma-secretase subunit APH-1A-like [Strongylocentrotus
purpuratus]
Length = 260
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 17/240 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G IA GP+ SLF+ IS++P I+ +++ WL SL+ S +W A PLK
Sbjct: 1 MTLLQLFGSMFIAYGPAFSLFLFTISREPLRIIVMMAGMFFWLCSLLTSSVLWFAVWPLK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFL---------T 111
F L S+ FQE R +++K+ ++ ED L F + +
Sbjct: 61 GQI--SFGLTF--SILFQELFRFIYYKILRKAEDGLQQFNQTTPEQAQQQAQNSNGDSTS 116
Query: 112 DKMQ--IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVT 169
DK + A GLG G +F +++L + GP T + P F + SA + F+
Sbjct: 117 DKTRHGYAYVAGLGFGTMSGIFSFINVLADSKGPGTVGIHGDPH-DFLITSAFLTSCFIL 175
Query: 170 IHTFSMVIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILL 229
+H VI + G+ V H + +TL+N S + +P+ Y+ +++ L
Sbjct: 176 LHIMWNVIFYWGFETRRYWAVLIVVASHFLVSELTLLN-KSQLYSITLPVAYVTLAVMTL 234
>gi|383847605|ref|XP_003699443.1| PREDICTED: gamma-secretase subunit Aph-1-like [Megachile rotundata]
Length = 238
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/207 (31%), Positives = 105/207 (50%), Gaps = 10/207 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV G A +A GP L++F ++ +P I+ +++S WLISL++ S +W A +PL+
Sbjct: 1 MTVMDFFGCAFLAFGPPLAMFTFTVAVEPIRIIILIASAFFWLISLLLSSILWYAVVPLQ 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+ A ++ SV FQE R L + V ++ E L ++V + + A
Sbjct: 61 N----HLAFGLVFSVLFQEAFRYLLYWVLRKAERGL----EKVTTTHV-ADSRHVFAYVC 111
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG G F +++L A GP T + R + FF+ISA L F+ +HTF V+ F+
Sbjct: 112 GLGFGFMSGAFALVNVLADAVGPGTMGLWRGTEY-FFIISAATTLCFILLHTFWGVVFFS 170
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVN 207
+ N +V HL +TL+N
Sbjct: 171 ALDKRNWGQVIWVVGSHLFVSCMTLLN 197
>gi|148229138|ref|NP_001089056.1| anterior pharynx defective 1 homolog A [Xenopus laevis]
gi|57870220|gb|AAH89044.1| LOC595044 protein [Xenopus laevis]
Length = 247
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW--RAFLP 58
M +A G +A GP+LSLF+ I+ P ++ +++ + WL+S+++ S IW +
Sbjct: 1 MALAVFFGCTFVAFGPALSLFILTIAADPLKVIILVAGSFFWLVSVLLSSLIWFISVQIS 60
Query: 59 LKSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K+ + LLI SV QE R ++++ K+ ++ L ++ P Q
Sbjct: 61 NKNDANLQYGLLIFGAAVSVLLQETFRYAYYRLLKKADEGLATISEDGRSP----ISIQQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A G G+ VF +++L A GP T V Q +FL SA + +A V +HTF
Sbjct: 117 MAYVSGFSFGIISGVFSVINILADAIGPGTVGVHGDSQY-YFLTSAFLTMAIVFLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
++ F + V + HLV +T +N
Sbjct: 176 IVFFAACEKRRPLHIVGVVLSHLVTSGLTFLN 207
>gi|348555589|ref|XP_003463606.1| PREDICTED: gamma-secretase subunit APH-1B-like isoform 2 [Cavia
porcellus]
Length = 257
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 93/186 (50%), Gaps = 13/186 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A G A IA GP+L+LFV I+ KP I+ +++ WL+SL++ S IW P+
Sbjct: 1 MTAAVFFGCAFIAFGPALALFVFTIATKPLRIIFLIAGAFFWLVSLLISSLIWFLATPIT 60
Query: 61 STTWWP---FALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
P F L+ ++ S+ QE R ++++ K+ L + P + L
Sbjct: 61 DNKDGPTQKFLLIFGVLPSIFIQEMFRFAYYRLLKKASKGLKSINPDEAAPSMQL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+ GLG G+ VF ++ L+ + GP T + PQ FFL SA + LA + +H F
Sbjct: 116 LGYVSGLGFGIMSGVFSFVNTLSNSLGPGTVGIHGDSPQ--FFLNSAFMTLAIILLHVFW 173
Query: 175 MVIAFN 180
++ F+
Sbjct: 174 GIVFFD 179
>gi|340367883|ref|XP_003382482.1| PREDICTED: gamma-secretase subunit Aph-1b-like [Amphimedon
queenslandica]
Length = 235
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 14/211 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV Y + GP ++LF +++ P I+T++ WL++L+ S +W +PLK
Sbjct: 1 MTVLTAFAYGIYTFGPPVALFFVTVARHPHEIITMILGAFFWLLALLFASLVWIIVIPLK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
T A + SV QE R L++K+ K+ + L+ ++ R K +IA G
Sbjct: 61 DTP----AFTLPISVILQEVFRWLYFKLLKKADHLLEIVSEDKSDLR-----KHKIAYVG 111
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG G+ + ++L+ A GP T R Q F +SA + +H VI F
Sbjct: 112 GLGFGLIAGIVMFANVLSVASGPGTV---RSNQY-FVTVSAFSTQVMIILHICWGVIFFA 167
Query: 181 GYAEGNTTDQYFVPVVHL-VAGMVTLVNFAS 210
G N + VP+ H+ ++ + L+N A+
Sbjct: 168 GLESKNWLYIFAVPISHMFISCLSLLINLAN 198
>gi|198433082|ref|XP_002120450.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 240
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 109/216 (50%), Gaps = 8/216 (3%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPF 67
G +IA GPSL++F+ I+K P I+ ++ WL++L+ + +W A +PLK
Sbjct: 8 GCTMIAFGPSLAMFILTIAKYPLKIILLVVGAFCWLLALLFSALLWLAVVPLKE----QL 63
Query: 68 ALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVA 127
A ++ SV FQEG+R +++ K E+ LD D + + +++ G G G+
Sbjct: 64 AFSLVFSVIFQEGMRYGLFRMMKNAENGLD---DALSEDEKKSISNHKLSYTTGFGFGLM 120
Query: 128 HAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNT 187
+ +F +++L+ + GP + +D F LISA + + + +HTF VI F+ +
Sbjct: 121 YGLFSIVNVLSQSIGPGSVGIDG-HSSNFMLISAFLTSSTILLHTFWNVIVFDALNKQQY 179
Query: 188 TDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYIL 223
V +H++ +L+N V + + YI+
Sbjct: 180 YKVITVVCLHMLVSCCSLLNVQQNLAYVSVIVSYIV 215
>gi|299471772|emb|CBN76993.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 284
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/261 (26%), Positives = 106/261 (40%), Gaps = 46/261 (17%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPF 67
G +LIA GPS+ L+V V+ K+P L++ L WL S+ S +W +P W
Sbjct: 8 GCSLIAFGPSIMLWVVVVGKRPALVIIGLVGAFFWLASMAAASVLW-TIVPAAQDAWL-- 64
Query: 68 ALLIISSVGFQEGLRVLFWKVYKRLEDTLDAF---------------------------- 99
L +I+ V R+ KVY + E ++
Sbjct: 65 -LSMITGVVLHGFGRLALAKVYVKTEAVINEAAAHAAPASNAHGSSGRYGGALGAEGSGG 123
Query: 100 ----------ADRVGKPR----LFLTDKMQIALAGGLGHGVAHAVFFCLSLLTPAFGPAT 145
D +P L + + ++A G+G G+ HAV + L+ GP
Sbjct: 124 VGEGRGERKTGDVPDQPEESSGLLRLNGVSSSIAAGVGWGLIHAVIMVGTALSKHMGPGA 183
Query: 146 FYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNTTDQYFVPVVHLVAGMVTL 205
+ CP +P ++SA+ A AFV + M AF G+ F +H A + T
Sbjct: 184 AFSPSCPHVPSVIVSALSAQAFVVLDLLLMAAAFAAARSGDAGLMSFSFGLHFAAALTTG 243
Query: 206 VNFASGGCVVGIPLLYILASL 226
NF GGC +PLLY + +L
Sbjct: 244 FNFIEGGCTASLPLLYGVVAL 264
>gi|307212332|gb|EFN88136.1| Gamma-secretase subunit Aph-1 [Harpegnathos saltator]
Length = 246
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 108/213 (50%), Gaps = 14/213 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G A +A G L++F I+ P+ I+ +++S WLISL++ S +W A +PL+
Sbjct: 1 MTLMDFFGCAFLAFGLPLAMFTFTIASNPYRIIILIASAFFWLISLLLSSILWYAVVPLQ 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLE------DTLDAFADRVGKPRLFLTDKM 114
+ A ++ SV FQE R L + V +++E D L A V + ++
Sbjct: 61 NY----LAFGLVFSVLFQESFRYLLYCVMRKVEICNIPPDRLAAAERAVNHV---VDGRL 113
Query: 115 QIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFS 174
+ + GLG G+ F +++L A GP T + + + FF+ISA I L F+ ++TF
Sbjct: 114 EYSYVCGLGFGLMSGAFALVNVLADAVGPGTMGLRQGTEY-FFMISAAITLCFILLNTFW 172
Query: 175 MVIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
VI F N +V HL+ +TL+N
Sbjct: 173 GVIFFTALDCRNWGQVIWVVSSHLLVSCMTLLN 205
>gi|62751363|ref|NP_001015843.1| anterior pharynx defective 1 homolog A [Xenopus (Silurana)
tropicalis]
gi|59808833|gb|AAH90132.1| anterior pharynx defective 1 homolog A [Xenopus (Silurana)
tropicalis]
Length = 247
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 101/212 (47%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW--RAFLP 58
M +A G +A GP+LSLF+ I+ P ++ +++ + WL+S+++ S IW +
Sbjct: 1 MALAVFFGCTFVAFGPALSLFILTIAVDPLKVIILVAGSFFWLVSVLLSSLIWFISVQIS 60
Query: 59 LKSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K+ + LLI SV QE R ++++ K+ ++ L ++ P Q
Sbjct: 61 NKNDANLQYGLLIFGAAVSVLLQETFRYAYYRLLKKADEGLATISEDGRSP----ISIQQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A G G+ VF +++L A GP V Q +FL SA + +A V +HTF
Sbjct: 117 MAYVSGFSFGIISGVFSVINILADAIGPGIVGVHGDSQY-YFLTSAFLTMAIVFLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
++ F + V + HLVA +T +N
Sbjct: 176 IVFFAACEKRKPLHIIGVVLSHLVASGLTFLN 207
>gi|167522377|ref|XP_001745526.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775875|gb|EDQ89497.1| predicted protein [Monosiga brevicollis MX1]
Length = 244
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 100/223 (44%), Gaps = 19/223 (8%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT + G I L+LF + K L++ ++SS LWL++ ++ + +W A PLK
Sbjct: 1 MTQMSLWGNIFIIYSAPLALFWFNVRKSSKLVIILISSAFLWLVAALLTAVVWVAVPPLK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
W FAL I+SV QE R L+W++ +R E L + + + ++A+
Sbjct: 61 DDYW--FAL--IASVLLQELFRYLWWRLLRRTEHDLSILSPDGD----VVITREKLAMVS 112
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG+G+ + +LL GP C F IS+ A H F +IAF+
Sbjct: 113 GLGYGLMSSTMMTCNLLDIMSGPGILAARGCTDHSHFTISSTTAAMIGLTHVFWGIIAFS 172
Query: 181 G----------YAEGNTTDQYFVPVVHLVAGMVTLVNFASGGC 213
G ++ G+ Y V HL ++TL N G C
Sbjct: 173 GWDIRRARRGAWSSGDLRVLY-VFFTHLFVSLLTLNNEHRGTC 214
>gi|260825428|ref|XP_002607668.1| hypothetical protein BRAFLDRAFT_123275 [Branchiostoma floridae]
gi|229293017|gb|EEN63678.1| hypothetical protein BRAFLDRAFT_123275 [Branchiostoma floridae]
Length = 244
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 104/208 (50%), Gaps = 11/208 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MTV G IA GP+ +LF+ I+++P I+ +++ WL+SL+ S +W PLK
Sbjct: 1 MTVKEFFGCTFIAYGPAFALFIFTIAREPLRIIILIAGCFFWLLSLLFSSVLWNIVWPLK 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
A ++ SV FQE R +K+ ++ ++ L F+D +DK IA
Sbjct: 61 DQ----LAFGVVFSVLFQEIFRFFIYKLLRKADEGLQTFSDEPPTA----SDKHTIAYVA 112
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMP-FFLISAIIALAFVTIHTFSMVIAF 179
GLG G+ F +++L A GP T + P FFL SA++ F+ +HTF VI F
Sbjct: 113 GLGFGLMSGAFSLVNVLAMATGPGTVGIHG--DTPYFFLTSALMTSCFILLHTFWNVIFF 170
Query: 180 NGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
G + N FV H++ +TL+
Sbjct: 171 WGCDKRNFPAVGFVVGFHMLISCLTLIR 198
>gi|221121638|ref|XP_002167184.1| PREDICTED: gamma-secretase subunit Aph-1b-like [Hydra
magnipapillata]
Length = 243
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 98/209 (46%), Gaps = 12/209 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ + G A +A GP+LS+F + +L ++SS WL+SL+V + W+ F
Sbjct: 1 MTLESFFGCAFVAFGPALSMFAITVFNDAQQVLVLISSAFFWLLSLLVSAMWWQLFNFTI 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+ F++ I SV FQE R+ W V +R E+ L R K++
Sbjct: 61 LKNYLVFSM--IFSVIFQEMFRLFLWMVLRRAEEGLIVMNGSYTPLR-----KIRFHYVS 113
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPAT--FYVDRCPQMPFFLISAIIALAFVTIHTFSMVIA 178
GLG+G+ +F +++L GP T + D F ++SA + FV +HT ++
Sbjct: 114 GLGYGLMSGLFAMVNILADITGPGTVGLFGD---NNHFVIVSAFLTNCFVLLHTCWGILF 170
Query: 179 FNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
F+ FV HL ++TL+N
Sbjct: 171 FDAMDAKKWKTVLFVCTSHLAISLLTLLN 199
>gi|50726954|ref|NP_112591.2| gamma-secretase subunit APH-1B isoform 1 [Homo sapiens]
gi|114657498|ref|XP_523094.2| PREDICTED: uncharacterized protein LOC467700 isoform 2 [Pan
troglodytes]
gi|397515496|ref|XP_003827986.1| PREDICTED: gamma-secretase subunit APH-1B [Pan paniscus]
gi|61252592|sp|Q8WW43.3|APH1B_HUMAN RecName: Full=Gamma-secretase subunit APH-1B; Short=APH-1b;
AltName: Full=Aph-1beta; AltName:
Full=Presenilin-stabilization factor-like
gi|18088649|gb|AAH20905.1| Anterior pharynx defective 1 homolog B (C. elegans) [Homo sapiens]
gi|119598051|gb|EAW77645.1| anterior pharynx defective 1 homolog B (C. elegans), isoform CRA_b
[Homo sapiens]
gi|123980996|gb|ABM82327.1| anterior pharynx defective 1 homolog B (C. elegans) [synthetic
construct]
gi|158255844|dbj|BAF83893.1| unnamed protein product [Homo sapiens]
gi|410209798|gb|JAA02118.1| anterior pharynx defective 1 homolog B [Pan troglodytes]
gi|410248856|gb|JAA12395.1| anterior pharynx defective 1 homolog B [Pan troglodytes]
gi|410289002|gb|JAA23101.1| anterior pharynx defective 1 homolog B [Pan troglodytes]
gi|410337357|gb|JAA37625.1| anterior pharynx defective 1 homolog B [Pan troglodytes]
Length = 257
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ +P I+ +++ WL+SL++ S +W R +
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVII 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + L+ SV QE R ++K+ K+ + L + P + L
Sbjct: 61 DNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYKLLKKASEGLKSINPGETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLYSAFMTLVIILLHVFW 173
Query: 175 MVIAFNG 181
++ F+G
Sbjct: 174 GIVFFDG 180
>gi|392350140|ref|XP_003750580.1| PREDICTED: gamma-secretase subunit APH-1B-like isoform 2 [Rattus
norvegicus]
Length = 257
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+LSL+V I+ P ++ +++ WL+SL++ S W R
Sbjct: 1 MTAAVFFGCAFIAFGPALSLYVFTIATDPLRVIFLIAGAFFWLVSLLLSSVFWFLVRVIT 60
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+ + L+ ++ SV QE R+ ++++ K+ + L + P + L
Sbjct: 61 DNRDGPVQNYLLIFGVLLSVCIQELFRLAYYRLLKKANEGLKSINPEETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ A GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSNALGPGTVGIHGDSPQ--FFLNSAFMTLVIIMLHVFW 173
Query: 175 MVIAFNGYAEGN 186
++ F+G E N
Sbjct: 174 GIVFFDG-CEKN 184
>gi|432092262|gb|ELK24886.1| Gamma-secretase subunit APH-1B [Myotis davidii]
Length = 257
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 100/213 (46%), Gaps = 13/213 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L++ I+ P I+ ++ WLISL+ S +W RA
Sbjct: 1 MTAAVFFGCAFIAFGPALALYIFTIATDPLRIIFLIVGAFFWLISLLFSSFVWFVARAIT 60
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+ + L+ ++ SV QE R ++++ K+ D L P + L
Sbjct: 61 DNRDGPIEKYLLIFGVLVSVLIQEMFRFAYYRLLKKANDGLKTINPDEPAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMP-FFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T V P FFL SA + + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGT--VGIHGDSPYFFLNSAFMTQVIILLHMFW 173
Query: 175 MVIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
+I F+G + N V + HL+ +T +N
Sbjct: 174 GIIFFDGCEKKNWYPLLAVILTHLLVSALTFLN 206
>gi|37182518|gb|AAQ89061.1| TAAV688 [Homo sapiens]
Length = 257
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ +P I+ +++ WL+SL++ S +W R +
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIAIEPLRIIFLIAGAFFWLVSLLISSLVWFMARVII 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + L+ SV QE R ++K+ K+ + L + P + L
Sbjct: 61 DNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYKLLKKASEGLKSINPGETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLYSAFMTLVIILLHVFW 173
Query: 175 MVIAFNG 181
++ F+G
Sbjct: 174 GIVFFDG 180
>gi|197099458|ref|NP_001125030.1| gamma-secretase subunit APH-1B [Pongo abelii]
gi|71152230|sp|Q5RDM3.1|APH1B_PONAB RecName: Full=Gamma-secretase subunit APH-1B; Short=APH-1b;
AltName: Full=Aph-1beta
gi|55726744|emb|CAH90134.1| hypothetical protein [Pongo abelii]
Length = 257
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 94/187 (50%), Gaps = 13/187 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ +P I+ +++ WL+SL++ S +W R +
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVII 60
Query: 58 PLKSTTWWPFALLIIS--SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + L+ + SV QE R ++++ K+ + L + P + L
Sbjct: 61 DNKDGPTQKYLLIFGTFVSVYIQEMFRFAYYRLLKKASEGLKSINPGETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLYSAFMTLVIILLHVFW 173
Query: 175 MVIAFNG 181
++ F+G
Sbjct: 174 GIVFFDG 180
>gi|118103670|ref|XP_001233302.1| PREDICTED: gamma-secretase subunit APH-1A [Gallus gallus]
Length = 256
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+A G IA GP+ SLF+ I++ P I+ +++ WL+SL++ S IW F+ +K
Sbjct: 1 MTLAVFFGCTFIAFGPAFSLFLFTIARDPLRIIILIAGAFFWLVSLLLSSLIW--FIAVK 58
Query: 61 STTWWPF------ALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLT 111
++ P LLI SV QE R L++K+ ++ + L A ++ P
Sbjct: 59 ASD--PHDEPLQKGLLIFGVMFSVLLQEAFRFLYYKLLRKAIEGLVALSEDGCSP----I 112
Query: 112 DKMQIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIH 171
Q+A G+G G+ F ++LL A GP T + Q+ +FL SA + + + +H
Sbjct: 113 SIQQMAYVAGVGFGLMSGAFSMINLLADALGPGTVGIHGDSQL-YFLTSAFMTMVLIFLH 171
Query: 172 TFSMVIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
TF ++ F+G + V V+HL T N
Sbjct: 172 TFWGILFFHGCENRRWWEIVAVVVMHLAVSGSTFCN 207
>gi|67970371|dbj|BAE01528.1| unnamed protein product [Macaca fascicularis]
Length = 257
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ P ++ +++ WL+SL++ S +W R
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATDPLRVIFLIAGAFFWLVSLLISSLVWFMARVIT 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + L+ SV QE R ++++ K+ + L + P + L
Sbjct: 61 DNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYRLLKKASEGLKSINPGETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLYSAFMTLVIILLHVFW 173
Query: 175 MVIAFNG 181
++ FNG
Sbjct: 174 GIVFFNG 180
>gi|332235871|ref|XP_003267128.1| PREDICTED: gamma-secretase subunit APH-1B isoform 1 [Nomascus
leucogenys]
Length = 257
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ +P I+ +++ WL+SL++ S +W R
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVIT 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + L+ SV QE R ++++ K+ + L + P + L
Sbjct: 61 DNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYRLLKKASEGLKSINPGETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLYSAFMTLVIILLHVFW 173
Query: 175 MVIAFNG 181
+I F+G
Sbjct: 174 GIIFFDG 180
>gi|29243936|ref|NP_808251.1| gamma-secretase subunit APH-1B [Mus musculus]
gi|37077156|sp|Q8C7N7.1|APH1B_MOUSE RecName: Full=Gamma-secretase subunit APH-1B; Short=APH-1b;
AltName: Full=Aph-1beta
gi|26340556|dbj|BAC33940.1| unnamed protein product [Mus musculus]
gi|50927492|gb|AAH79659.1| Anterior pharynx defective 1b homolog (C. elegans) [Mus musculus]
gi|74191845|dbj|BAE32873.1| unnamed protein product [Mus musculus]
gi|148694179|gb|EDL26126.1| mCG130387, isoform CRA_a [Mus musculus]
Length = 257
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 95/192 (49%), Gaps = 14/192 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ P ++ +++ WL+SL++ S W R
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATDPLRVIFLIAGAFFWLVSLLLSSVFWFLVRVIT 60
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+ + L+ ++ SV QE R+ ++K+ K+ + L + P + L
Sbjct: 61 DNRDGPVQNYLLIFGVLLSVCIQELFRLAYYKLLKKASEGLKSINPEETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSNSLGPGTVGIHGDSPQ--FFLNSAFMTLVVIMLHVFW 173
Query: 175 MVIAFNGYAEGN 186
V+ F+G E N
Sbjct: 174 GVVFFDG-CEKN 184
>gi|24637564|gb|AAN63817.1|AF508794_1 presenilin stabilization factor-like protein [Homo sapiens]
gi|12052866|emb|CAB66606.1| hypothetical protein [Homo sapiens]
gi|117644216|emb|CAL37602.1| hypothetical protein [synthetic construct]
gi|117644522|emb|CAL37756.1| hypothetical protein [synthetic construct]
gi|261859408|dbj|BAI46226.1| anterior pharynx defective 1 homolog B [synthetic construct]
Length = 257
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ +P I+ +++ WL+SL++ S +W R +
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVII 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + L+ SV +E R ++K+ K+ + L + P + L
Sbjct: 61 DNKDGPTQKYLLIFGAFVSVYIREMFRFAYYKLLKKASEGLKSINPGETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLYSAFMTLVIILLHVFW 173
Query: 175 MVIAFNG 181
++ F+G
Sbjct: 174 GIVFFDG 180
>gi|403298217|ref|XP_003939927.1| PREDICTED: gamma-secretase subunit APH-1B isoform 1 [Saimiri
boliviensis boliviensis]
Length = 257
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 93/187 (49%), Gaps = 13/187 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ +P I+ +++ WL+SL++ S +W R
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVIT 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + L+ + SV QE R ++++ K+ + L + P + L
Sbjct: 61 DNKDGPIQKYLLIFGALVSVFIQEMFRFAYYRLLKKASEGLKSINPGETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLNSAFMTLVIILLHVFW 173
Query: 175 MVIAFNG 181
++ F+G
Sbjct: 174 GIVFFDG 180
>gi|395822283|ref|XP_003784450.1| PREDICTED: gamma-secretase subunit APH-1B isoform 1 [Otolemur
garnettii]
Length = 257
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ + I+ +++ WL+SL+ S +W RA
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIANESLRIIFLIAGAFFWLVSLLFSSLVWFVARAIT 60
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+ + L+ ++ SV QE R ++++ K+ + L P + L
Sbjct: 61 ESREEPIQKYLLIFGVLVSVFIQELFRFAYYRLLKKANEGLKTINPGETVPSMQL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLNSAFMTLVIILLHVFW 173
Query: 175 MVIAFNGYAEGN 186
++ F+G + N
Sbjct: 174 GIVFFDGCEKKN 185
>gi|402874515|ref|XP_003901081.1| PREDICTED: gamma-secretase subunit APH-1B [Papio anubis]
gi|380816962|gb|AFE80355.1| gamma-secretase subunit APH-1B isoform 1 [Macaca mulatta]
gi|383413141|gb|AFH29784.1| gamma-secretase subunit APH-1B isoform 1 [Macaca mulatta]
gi|384949700|gb|AFI38455.1| gamma-secretase subunit APH-1B isoform 1 [Macaca mulatta]
Length = 257
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ P ++ +++ WL+SL++ S +W R
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATDPLRVIFLIAGAFFWLVSLLISSLVWFMARVIT 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + L+ SV QE R ++++ K+ + L + P + L
Sbjct: 61 DNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYRLLKKASEGLKSINPGETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLYSAFMTLVIILLHVFW 173
Query: 175 MVIAFNG 181
++ F+G
Sbjct: 174 GIVFFDG 180
>gi|291233423|ref|XP_002736656.1| PREDICTED: anterior pharynx defective 1-like [Saccoglossus
kowalevskii]
Length = 248
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 98/207 (47%), Gaps = 9/207 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT + G IA GP +++F+ I K P ++ +++ + WL+SL++ S +W PL+
Sbjct: 1 MTTMSLFGATFIAFGPLIAMFIFTIVKDPLKVIIMIAGSFFWLLSLLLSSLLWVIVSPLQ 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
A +I SV FQE R+ ++K+ ++ +D + F D + K Q
Sbjct: 61 D----ELAFAVIFSVIFQELFRLAYYKLLRKADDGMQQFTDVDQD----VISKNQTGYVA 112
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
G+G + + +++L GP T ++ ++ F L SA F +HTF VI F
Sbjct: 113 GVGFALMSSTMSTVNILADHSGPGTVGINGDDEL-FLLTSAFFTCCFTLLHTFWGVIFFY 171
Query: 181 GYAEGNTTDQYFVPVVHLVAGMVTLVN 207
G + V V HL +TL+N
Sbjct: 172 GMDKKKYLMVLGVVVSHLAVSCLTLLN 198
>gi|354474334|ref|XP_003499386.1| PREDICTED: gamma-secretase subunit APH-1B-like [Cricetulus griseus]
Length = 257
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 13/187 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ P + +++ WL+SL++ S W R
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATDPLRVTFLIAGAFFWLVSLLLSSVFWYLVRIIT 60
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + L+ ++ SV QE R+ ++++ K+ + L + P + L
Sbjct: 61 DNKDGPIQKYLLIFGVLLSVCIQELFRLAYYRLLKKASEGLKSINPEETTPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLNSAFMTLVIILLHVFW 173
Query: 175 MVIAFNG 181
++ F+G
Sbjct: 174 GIVFFDG 180
>gi|300120007|emb|CBK19561.2| unnamed protein product [Blastocystis hominis]
Length = 251
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 112/231 (48%), Gaps = 9/231 (3%)
Query: 7 IGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWP 66
+G LIA GPS +V +S++P+L++ L LW + VLSG + + ST P
Sbjct: 7 VGSLLIAFGPSSIFYVTTVSRRPYLLVVSLFG-FLWSMLSFVLSGAIFSIWNIWSTPPLP 65
Query: 67 FALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFL--TDKMQIALAGGLGH 124
++++ S+ F E LR VYK + + + V P T+ ++++ G+G
Sbjct: 66 VSMVL--SILFFELLRPF---VYKFMNFSCKKL-NEVDIPLSITAPTELFKLSVCAGMGT 119
Query: 125 GVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAE 184
G+ L LT A A +Y+ +C M +++ AI +L + +H + Y+
Sbjct: 120 GLLTVFSIALVPLTSAGYAADYYMPQCNCMSLYVVIAIESLCVMPLHVLWTYLTLRAYSS 179
Query: 185 GNTTDQYFVPVVHLVAGMVTLVNFASGGCVVGIPLLYILASLILLHCGKMV 235
V ++HL+ G VTL+N S GC+ + +L +LA +L K+V
Sbjct: 180 KYWPTAIVVCILHLLQGCVTLLNQVSSGCIYAVVILVVLALAAILVLSKLV 230
>gi|328872781|gb|EGG21148.1| gamma-secretase subunit Aph-1 [Dictyostelium fasciculatum]
Length = 281
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 105/260 (40%), Gaps = 50/260 (19%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWW-- 65
G + P L+ + V+ + LI+ + + WL+S++V S W P++++ W+
Sbjct: 8 GCLFVGFSPILAFYAMVVCRNSQLIILSIGGSFFWLLSMLVASIWWYIIPPMRTSFWFII 67
Query: 66 PFALLIISSVGFQEGLRVLFWKVYK-------RLEDTLDAFADRVGKPRLFLTDKMQIAL 118
PF S+ QE R LF+++Y L ++ + + +D+ + L
Sbjct: 68 PF------SIAIQEAFRYLFYRLYAWGFNNRPSLSQVQSQLQKQLKEKSINSSDQSETEL 121
Query: 119 ---------------------------------AGGLGHGVAHAVFFCLSLLTPAFGPAT 145
A G G G+ +A +++ + GP
Sbjct: 122 QQQQQSSQQPNHQDINTRLETLSARPNHTLSSAAIGCGSGITYAFVMYGTIMWDSQGPGN 181
Query: 146 FYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNTTDQYFVPVVHLVAGMVTL 205
+ CP + F+ISAI+AL +H VIAF G+ FV + H + +TL
Sbjct: 182 LFSAACPTVSLFMISAILALCISLLHIAWNVIAFQGFRSKKYYLVAFVIICHYLISYLTL 241
Query: 206 VNFASG--GCVVGIPLLYIL 223
+N G VV I ++ IL
Sbjct: 242 LNIKKSCEGSVVSIGIITIL 261
>gi|296483248|tpg|DAA25363.1| TPA: anterior pharynx defective 1c homolog isoform 2 [Bos taurus]
Length = 257
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A G A IA GP+L+L++ I +P I+ ++ WL+SL+ S IW L
Sbjct: 1 MTAAVFFGCAFIAFGPALALYIFTIVTEPLRIIFLIIGAFFWLVSLLFSSLIWFTTATLI 60
Query: 61 STTWWP-------FALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDK 113
P F +LI SV QE R ++K+ K+ + L P + L
Sbjct: 61 GNKDEPREKYLLIFGVLI--SVLIQEMFRFAYYKLLKKASEGLKTINPYEKAPSMRL--- 115
Query: 114 MQIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTF 173
+A GLG G+ VF ++ L+ + GP T + P FFL SA + L +H F
Sbjct: 116 --LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDPPQ-FFLYSAFMTLVITLLHVF 172
Query: 174 SMVIAFNG 181
++ F+G
Sbjct: 173 WGIVFFDG 180
>gi|114053317|ref|NP_001040555.1| gamma-secretase subunit APH-1B [Rattus norvegicus]
gi|110293151|gb|ABG66305.1| APH-1B' [Rattus norvegicus]
gi|183986583|gb|AAI66592.1| Anterior pharynx defective 1 homolog B (C. elegans) [Rattus
norvegicus]
Length = 257
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT G A IA GP+L+L++ I+ P ++ +++ WL+SL++ S W R
Sbjct: 1 MTAPVFFGCAFIAFGPALALYLFTIATDPLRVIFLIAGAFFWLVSLLLSSVFWFLVRVIT 60
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+ + L+ ++ SV QE R+ ++++ K+ + L + P + L
Sbjct: 61 DNRDGPVQNYLLIFGVLLSVCIQELFRLAYYRLLKKASEGLKSINPEETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ A GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSNALGPGTVGIHGDSPQ--FFLNSAFMTLVIIMLHVFW 173
Query: 175 MVIAFNGYAEGN 186
++ F+G E N
Sbjct: 174 GIVFFDG-CEKN 184
>gi|363742824|ref|XP_428797.3| PREDICTED: gamma-secretase subunit APH-1A-like [Gallus gallus]
Length = 265
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 12/213 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW--RAFLP 58
M A G A IA GP+L+L + ++ +P ++ +++ WL+SL++ S IW L
Sbjct: 1 MGAAVFFGCAGIAFGPALALVLLTVAAEPLRVIILVAGAFFWLVSLLLASLIWFISVHLS 60
Query: 59 LKSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+ + LL+ SV QE R ++K+ K+ ++ L ++ P Q
Sbjct: 61 DQGNARLQYGLLVFGAAVSVLLQEAFRFAYFKLLKKADEGLATISEDGRSP----ISLKQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLI-SAIIALAFVTIHTFS 174
+A GL G+ VF +++L + GP V P++ I SA + +A V +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADSIGPGI--VGIHGDSPYYFITSAFLTMAVVLLHTFW 174
Query: 175 MVIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
VI F+ + V + HLV +T +N
Sbjct: 175 GVIFFDACEKRRYWCLGLVVISHLVTSGLTFLN 207
>gi|109081433|ref|XP_001105067.1| PREDICTED: gamma-secretase subunit APH-1B [Macaca mulatta]
Length = 257
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ P ++ +++ WL+SL++ S +W R
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATDPLRVIFLIAGAFFWLVSLLISSLVWFMARVIT 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + L+ SV Q+ R ++++ K+ + L + P + L
Sbjct: 61 DNKDGPTQKYLLIFGAFVSVYIQKMFRFAYYRLLKKASEGLKSINPGETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLYSAFMTLVIILLHVFW 173
Query: 175 MVIAFNG 181
++ F+G
Sbjct: 174 GIVFFDG 180
>gi|392350164|ref|XP_003750585.1| PREDICTED: gamma-secretase subunit APH-1B-like, partial [Rattus
norvegicus]
gi|149028912|gb|EDL84253.1| rCG56634, isoform CRA_a [Rattus norvegicus]
Length = 202
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 94/192 (48%), Gaps = 14/192 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT G A IA GP+L+L++ I+ P ++ +++ WL+SL++ S W R
Sbjct: 1 MTAPVFFGCAFIAFGPALALYLFTIATDPLRVIFLIAGAFFWLVSLLLSSVFWFLVRVIT 60
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+ + L+ ++ SV QE R+ ++++ K+ + L + P + L
Sbjct: 61 DNRDGPVQNYLLIFGVLLSVCIQELFRLAYYRLLKKASEGLKSINPEETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ A GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSNALGPGTVGIHGDSPQ--FFLNSAFMTLVIIMLHVFW 173
Query: 175 MVIAFNGYAEGN 186
++ F+G E N
Sbjct: 174 GIVFFDG-CEKN 184
>gi|387018510|gb|AFJ51373.1| Gamma-secretase subunit APH-1A [Crotalus adamanteus]
Length = 254
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 14/214 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G A +A GP+L+LF+ + +P ++ +++ WL+SL++ S +W F+ K
Sbjct: 1 MTLPVFFGCAFVAFGPALALFLLTVVGEPLRVIILIAGAFFWLVSLLLSSLVW--FVAAK 58
Query: 61 STTWWPFALL-------IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDK 113
++ AL ++ SV QE R L++K+ ++ + L A ++ P
Sbjct: 59 ASDPTDQALQRGLLVFGVLFSVALQEAFRFLYYKLLRKAMEGLLALSEDGCSP----ISI 114
Query: 114 MQIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTF 173
Q+A GLG G+ F ++LL + GP + Q+ +FL SA + L + +HTF
Sbjct: 115 QQMAYVAGLGFGLMSGAFAMINLLADSLGPGIVGIQGDSQL-YFLTSAFMTLVLILLHTF 173
Query: 174 SMVIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
+I F+G + V + HL +T N
Sbjct: 174 WGIIFFHGCETRRWGEVAAVVLCHLTVSALTFWN 207
>gi|426233176|ref|XP_004010593.1| PREDICTED: gamma-secretase subunit APH-1B isoform 1 [Ovis aries]
Length = 257
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 87/188 (46%), Gaps = 15/188 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A G A IA GP+L+L++ I +P I+ ++ WL+SL+ S IW L
Sbjct: 1 MTAAVFFGCAFIAFGPALALYIFTIVTEPLRIIFLIIGAFFWLVSLLFSSLIWFTTATLI 60
Query: 61 STTWWP-------FALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDK 113
P F +LI SV QE R ++K+ K+ + L P + L
Sbjct: 61 GNKDEPREKYLLIFGVLI--SVLIQEMFRFAYYKLLKKASEGLKIINPYEKAPSMRL--- 115
Query: 114 MQIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTF 173
+A GLG G+ VF ++ L+ + GP T + P FFL SA + L +H F
Sbjct: 116 --LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDPPQ-FFLNSAFMTLVITLLHVF 172
Query: 174 SMVIAFNG 181
++ F+G
Sbjct: 173 WGIVFFDG 180
>gi|22203751|ref|NP_666216.1| gamma-secretase subunit APH-1A isoform 1 [Mus musculus]
gi|15341753|gb|AAH12406.1| Anterior pharynx defective 1a homolog (C. elegans) [Mus musculus]
gi|34786036|gb|AAH57865.1| Anterior pharynx defective 1a homolog (C. elegans) [Mus musculus]
gi|74203868|dbj|BAE28531.1| unnamed protein product [Mus musculus]
gi|148706906|gb|EDL38853.1| mCG16760, isoform CRA_c [Mus musculus]
gi|148707365|gb|EDL39312.1| mCG124590 [Mus musculus]
Length = 247
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ SLF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFSLFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|74214575|dbj|BAE31132.1| unnamed protein product [Mus musculus]
Length = 247
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ SLF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFSLFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGIHGGSPY-YFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|330822438|ref|XP_003291659.1| hypothetical protein DICPUDRAFT_39331 [Dictyostelium purpureum]
gi|325078158|gb|EGC31825.1| hypothetical protein DICPUDRAFT_39331 [Dictyostelium purpureum]
Length = 315
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/285 (23%), Positives = 108/285 (37%), Gaps = 72/285 (25%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT G I P L+ F VI+K L++ + + WL+S I+LS IW +P
Sbjct: 1 MTQVLFYGCLFITFSPILAFFFLVIAKNSQLVILTIGGSFFWLVS-ILLSAIWWYIIPPM 59
Query: 61 STTWW---PFALLIISSV----------GF------------QEGLRVLFWKVYKR---- 91
WW PFA++ ++ GF Q + + K K+
Sbjct: 60 REQWWFTIPFAVVFQEAIRYLFYRLYSWGFNDRPSLNQIKETQHQMSLDQMKKRKQVKTS 119
Query: 92 ------------------------LEDTLDAFADRVGKPRLFLTDKMQI----------- 116
+++ D+ + K +DK ++
Sbjct: 120 YQNENYNNDNDNNNNNNNDDDTFSIDNKNDSDENDNDKSESKESDKAEVVINNRLETLSA 179
Query: 117 -------ALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVT 169
A A G+G+G A+ S+L + GP T + CP + F++S+II L
Sbjct: 180 RPNHTLSATAIGVGNGTAYGFIMFGSILWESTGPGTMFSPACPTVNLFMLSSIITLCMTI 239
Query: 170 IHTFSMVIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVNFASGGCV 214
+H V+AF GY +V +VH + +TL+N S C+
Sbjct: 240 LHVVYNVLAFQGYRSRKYHLVVYVVIVHFLTSFLTLLNQPSKSCI 284
>gi|328769063|gb|EGF79108.1| hypothetical protein BATDEDRAFT_26332 [Batrachochytrium
dendrobatidis JAM81]
Length = 238
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 103/222 (46%), Gaps = 16/222 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ + G A GP++ L + I L++ LSS +WL+S++V + I FLP
Sbjct: 1 MTLLSFFGNLFTAYGPAVMLMLMYIGPSARLMMMSLSSGFVWLLSILV-AAIIAHFLPNL 59
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
S+ W +++ S QE RV + ++K + L + P +++ ++A
Sbjct: 60 SSNSWQ---MVVMSSCIQEVSRVATFYLFKYADSVLILISSDPTTPF----NRVHHSVAA 112
Query: 121 GLGHGVAHAVFFCLSLLTPAF---GPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVI 177
G G G+ + +S +TP F P CP F I AI F+ +H V+
Sbjct: 113 GFGIGMMSGM---VSFITPLFESISPGIMVCSSCPGTDIFFIGAITTSLFIFLHIMWNVV 169
Query: 178 AFNGYAEGNTTDQYFVPVVHLVAGMVTL--VNFASGGCVVGI 217
F+G+ +G +V + HL A + TL + SGGC+ I
Sbjct: 170 VFDGWYKGQWYQFIWVMLSHLGASLATLWIPSNVSGGCIYSI 211
>gi|71051695|gb|AAH98711.1| Aph1b protein [Rattus norvegicus]
Length = 256
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 92/185 (49%), Gaps = 14/185 (7%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFLPLKSTTW 64
G A IA GP+L+L++ I+ P ++ +++ WL+SL++ S W R +
Sbjct: 7 GCAFIAFGPALALYLFTIATDPLRVIFLIAGAFFWLVSLLLSSVFWFLVRVITDNRDGPV 66
Query: 65 WPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGL 122
+ L+ ++ SV QE R+ ++++ K+ + L + P + L +A GL
Sbjct: 67 QNYLLIFGVLLSVCIQELFRLAYYRLLKKASEGLKSINPEETAPSMRL-----LAYVSGL 121
Query: 123 GHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFSMVIAFNG 181
G G+ VF ++ L+ A GP T + PQ FFL SA + L + +H F ++ F+G
Sbjct: 122 GFGIMSGVFSFVNTLSNALGPGTVGIHGDSPQ--FFLNSAFMTLVIIMLHVFWGIVFFDG 179
Query: 182 YAEGN 186
E N
Sbjct: 180 -CEKN 183
>gi|193786819|dbj|BAG52142.1| unnamed protein product [Homo sapiens]
Length = 247
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFCGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +S+L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVISILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|189339191|ref|NP_666246.1| gamma-secretase subunit APH-1A isoform 2 [Mus musculus]
gi|37077149|sp|Q8BVF7.2|APH1A_MOUSE RecName: Full=Gamma-secretase subunit APH-1A; Short=APH-1a;
AltName: Full=Aph-1alpha
gi|18848275|gb|AAH24111.1| Aph1a protein [Mus musculus]
gi|148706904|gb|EDL38851.1| mCG16760, isoform CRA_a [Mus musculus]
Length = 265
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ SLF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFSLFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|355778097|gb|EHH63133.1| Gamma-secretase subunit APH-1B, partial [Macaca fascicularis]
Length = 252
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 88/180 (48%), Gaps = 13/180 (7%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFLPLKSTTW 64
G A IA GP+L+L+V I+ P ++ +++ WL+SL++ S +W R K
Sbjct: 3 GCAFIAFGPALALYVFTIATDPLRVIFLIAGAFFWLVSLLISSLVWFMARVITDNKDGPT 62
Query: 65 WPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGL 122
+ L+ SV QE R ++++ K+ + L + P + L +A GL
Sbjct: 63 QKYLLIFGAFVSVYIQEMFRFAYYRLLKKASEGLKSINPGETAPSMRL-----LAYVSGL 117
Query: 123 GHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFSMVIAFNG 181
G G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F ++ F+G
Sbjct: 118 GFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLYSAFMTLVIILLHVFWGIVFFDG 175
>gi|344238689|gb|EGV94792.1| Gamma-secretase subunit APH-1A [Cricetulus griseus]
Length = 247
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALSLVVGSHLLTSGLTFLN 207
>gi|351705675|gb|EHB08594.1| Gamma-secretase subunit APH-1A [Heterocephalus glaber]
Length = 265
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S IW + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVIWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|21492616|ref|NP_080950.1| putative gamma-secretase subunit APH-1C [Mus musculus]
gi|37077773|sp|Q9DCZ9.1|APH1C_MOUSE RecName: Full=Putative gamma-secretase subunit APH-1C
gi|12832198|dbj|BAB22004.1| unnamed protein product [Mus musculus]
gi|29747906|gb|AAH50923.1| Anterior pharynx defective 1c homolog (C. elegans) [Mus musculus]
gi|38648719|gb|AAH63254.1| Anterior pharynx defective 1c homolog (C. elegans) [Mus musculus]
gi|74196377|dbj|BAE33077.1| unnamed protein product [Mus musculus]
gi|148694183|gb|EDL26130.1| mCG130385 [Mus musculus]
Length = 258
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 15/193 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT+ G A IA GP+ +L++ I+ P ++ +++ WL+SL++ S W R
Sbjct: 1 MTLPVFFGCAFIAFGPAFALYLFTIATDPLRVIFLIAGAFFWLVSLLLSSMFWFLVRVIT 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+ + + L+ + SV QE R+ ++K+ K+ + L + P + M+
Sbjct: 61 NNRDESVQNYLLIFGALLSVCIQELFRLAYYKLLKKASEGLKSI-----NPEEDIAPSMR 115
Query: 116 -IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTF 173
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LLAYVSGLGFGIMSGVFSFVNTLSNSLGPGTVGIHGDSPQ--FFLNSAFMTLVVIMLHVF 173
Query: 174 SMVIAFNGYAEGN 186
V+ F+G E N
Sbjct: 174 WGVVFFDG-CEKN 185
>gi|354472921|ref|XP_003498685.1| PREDICTED: gamma-secretase subunit APH-1A-like [Cricetulus griseus]
Length = 265
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALSLVVGSHLLTSGLTFLN 207
>gi|117606357|ref|NP_057106.2| gamma-secretase subunit APH-1A isoform 2 [Homo sapiens]
gi|14250557|gb|AAH08732.1| Anterior pharynx defective 1 homolog A (C. elegans) [Homo sapiens]
gi|14550502|gb|AAH09501.1| Anterior pharynx defective 1 homolog A (C. elegans) [Homo sapiens]
gi|17389295|gb|AAH17699.1| Anterior pharynx defective 1 homolog A (C. elegans) [Homo sapiens]
gi|22761292|dbj|BAC11529.1| unnamed protein product [Homo sapiens]
gi|25989508|gb|AAM61955.1| presenilin stabilization factor a [Homo sapiens]
gi|37183020|gb|AAQ89310.1| GAAV579 [Homo sapiens]
gi|56204870|emb|CAI22812.1| anterior pharynx defective 1 homolog A (C. elegans) [Homo sapiens]
gi|119573951|gb|EAW53566.1| anterior pharynx defective 1 homolog A (C. elegans), isoform CRA_b
[Homo sapiens]
gi|119573952|gb|EAW53567.1| anterior pharynx defective 1 homolog A (C. elegans), isoform CRA_b
[Homo sapiens]
gi|193786106|dbj|BAG51389.1| unnamed protein product [Homo sapiens]
gi|312150240|gb|ADQ31632.1| anterior pharynx defective 1 homolog A (C. elegans) [synthetic
construct]
gi|343958930|dbj|BAK63320.1| gamma-secretase subunit APH-1A [Pan troglodytes]
gi|380813324|gb|AFE78536.1| gamma-secretase subunit APH-1A isoform 2 [Macaca mulatta]
gi|383412093|gb|AFH29260.1| gamma-secretase subunit APH-1A isoform 2 [Macaca mulatta]
gi|384947428|gb|AFI37319.1| gamma-secretase subunit APH-1A isoform 2 [Macaca mulatta]
gi|410222374|gb|JAA08406.1| anterior pharynx defective 1 homolog A [Pan troglodytes]
gi|410256600|gb|JAA16267.1| anterior pharynx defective 1 homolog A [Pan troglodytes]
gi|410300790|gb|JAA28995.1| anterior pharynx defective 1 homolog A [Pan troglodytes]
gi|410342885|gb|JAA40389.1| anterior pharynx defective 1 homolog A [Pan troglodytes]
Length = 247
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|344275494|ref|XP_003409547.1| PREDICTED: gamma-secretase subunit APH-1A-like [Loxodonta africana]
Length = 265
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSNARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|4929623|gb|AAD34072.1|AF151835_1 CGI-78 protein [Homo sapiens]
gi|24637562|gb|AAN63816.1|AF508787_1 presenilin stabilization factor [Homo sapiens]
Length = 251
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|77736285|ref|NP_001029842.1| gamma-secretase subunit APH-1A [Bos taurus]
gi|74267816|gb|AAI03091.1| Anterior pharynx defective 1 homolog A (C. elegans) [Bos taurus]
gi|296489570|tpg|DAA31683.1| TPA: anterior pharynx defective 1 homolog A [Bos taurus]
Length = 247
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|301756857|ref|XP_002914313.1| PREDICTED: gamma-secretase subunit APH-1B-like, partial [Ailuropoda
melanoleuca]
Length = 259
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 13/180 (7%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFLPLKSTTW 64
G A IA GP+L+L++ I+ +P ++ ++ WL+SL+ S W R K
Sbjct: 10 GCAFIAFGPALALYIFTIATEPLRVIFLIIGAFFWLVSLLFSSLFWFMARTITDNKDGPI 69
Query: 65 WPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGL 122
+ L++ + SV QE R +++K+ K+ + L + P + L +A GL
Sbjct: 70 QKYLLILGALVSVLIQELFRFVYYKLLKKASEGLKSINPDETAPSMRL-----LAYVSGL 124
Query: 123 GHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFSMVIAFNG 181
G G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F +I F+G
Sbjct: 125 GFGIMSGVFAFVNTLSDSLGPGTVGIHGDSPQ--FFLNSAFMTLVIILLHVFWGIIFFDG 182
>gi|281347306|gb|EFB22890.1| hypothetical protein PANDA_002151 [Ailuropoda melanoleuca]
Length = 251
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 13/180 (7%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFLPLKSTTW 64
G A IA GP+L+L++ I+ +P ++ ++ WL+SL+ S W R K
Sbjct: 2 GCAFIAFGPALALYIFTIATEPLRVIFLIIGAFFWLVSLLFSSLFWFMARTITDNKDGPI 61
Query: 65 WPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGL 122
+ L++ + SV QE R +++K+ K+ + L + P + L +A GL
Sbjct: 62 QKYLLILGALVSVLIQELFRFVYYKLLKKASEGLKSINPDETAPSMRL-----LAYVSGL 116
Query: 123 GHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFSMVIAFNG 181
G G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F +I F+G
Sbjct: 117 GFGIMSGVFAFVNTLSDSLGPGTVGIHGDSPQ--FFLNSAFMTLVIILLHVFWGIIFFDG 174
>gi|347300204|ref|NP_001231416.1| gamma-secretase subunit APH-1A [Sus scrofa]
Length = 247
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|296228673|ref|XP_002759910.1| PREDICTED: gamma-secretase subunit APH-1A [Callithrix jacchus]
Length = 265
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|12654775|gb|AAH01230.1| Anterior pharynx defective 1 homolog A (C. elegans) [Homo sapiens]
gi|325464633|gb|ADZ16087.1| anterior pharynx defective 1 homolog A (C. elegans) [synthetic
construct]
Length = 265
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|117606362|ref|NP_001071096.1| gamma-secretase subunit APH-1A isoform 1 [Homo sapiens]
gi|388490162|ref|NP_001252969.1| anterior pharynx defective 1 homolog A [Macaca mulatta]
gi|55588124|ref|XP_513772.1| PREDICTED: gamma-secretase subunit APH-1A isoform 5 [Pan
troglodytes]
gi|297663753|ref|XP_002810334.1| PREDICTED: gamma-secretase subunit APH-1A [Pongo abelii]
gi|332220135|ref|XP_003259213.1| PREDICTED: gamma-secretase subunit APH-1A [Nomascus leucogenys]
gi|397492910|ref|XP_003817363.1| PREDICTED: gamma-secretase subunit APH-1A [Pan paniscus]
gi|402856067|ref|XP_003892624.1| PREDICTED: gamma-secretase subunit APH-1A [Papio anubis]
gi|426331302|ref|XP_004026621.1| PREDICTED: gamma-secretase subunit APH-1A [Gorilla gorilla gorilla]
gi|37077707|sp|Q96BI3.1|APH1A_HUMAN RecName: Full=Gamma-secretase subunit APH-1A; Short=APH-1a;
AltName: Full=Aph-1alpha; AltName:
Full=Presenilin-stabilization factor
gi|15990414|gb|AAH15568.1| Anterior pharynx defective 1 homolog A (C. elegans) [Homo sapiens]
gi|18088501|gb|AAH20590.1| Anterior pharynx defective 1 homolog A (C. elegans) [Homo sapiens]
gi|25989510|gb|AAM61956.1| presenilin stabilization factor b [Homo sapiens]
gi|56204869|emb|CAI22811.1| anterior pharynx defective 1 homolog A (C. elegans) [Homo sapiens]
gi|119573950|gb|EAW53565.1| anterior pharynx defective 1 homolog A (C. elegans), isoform CRA_a
[Homo sapiens]
gi|325464231|gb|ADZ15886.1| anterior pharynx defective 1 homolog A (C. elegans) [synthetic
construct]
gi|355558387|gb|EHH15167.1| hypothetical protein EGK_01222 [Macaca mulatta]
gi|355745641|gb|EHH50266.1| hypothetical protein EGM_01071 [Macaca fascicularis]
gi|380813326|gb|AFE78537.1| gamma-secretase subunit APH-1A isoform 1 [Macaca mulatta]
gi|383412095|gb|AFH29261.1| gamma-secretase subunit APH-1A isoform 1 [Macaca mulatta]
gi|384947430|gb|AFI37320.1| gamma-secretase subunit APH-1A isoform 1 [Macaca mulatta]
gi|410222372|gb|JAA08405.1| anterior pharynx defective 1 homolog A [Pan troglodytes]
gi|410256598|gb|JAA16266.1| anterior pharynx defective 1 homolog A [Pan troglodytes]
gi|410300788|gb|JAA28994.1| anterior pharynx defective 1 homolog A [Pan troglodytes]
gi|410342883|gb|JAA40388.1| anterior pharynx defective 1 homolog A [Pan troglodytes]
Length = 265
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|62079241|ref|NP_001014277.1| anterior pharynx defective 1 homolog A [Rattus norvegicus]
gi|56268871|gb|AAH87081.1| Anterior pharynx defective 1 homolog A (C. elegans) [Rattus
norvegicus]
gi|149030631|gb|EDL85668.1| anterior pharynx defective 1a homolog (C. elegans), isoform CRA_b
[Rattus norvegicus]
Length = 247
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|359321705|ref|XP_003639673.1| PREDICTED: gamma-secretase subunit APH-1A-like isoform 1 [Canis
lupus familiaris]
Length = 265
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|440906706|gb|ELR56935.1| Gamma-secretase subunit APH-1A [Bos grunniens mutus]
Length = 265
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|348586387|ref|XP_003478950.1| PREDICTED: gamma-secretase subunit APH-1A-like [Cavia porcellus]
Length = 265
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|291398055|ref|XP_002715647.1| PREDICTED: anterior pharynx defective 1 homolog A [Oryctolagus
cuniculus]
gi|301767973|ref|XP_002919359.1| PREDICTED: gamma-secretase subunit APH-1A-like [Ailuropoda
melanoleuca]
gi|410968238|ref|XP_003990614.1| PREDICTED: gamma-secretase subunit APH-1A isoform 1 [Felis catus]
gi|281352901|gb|EFB28485.1| hypothetical protein PANDA_008026 [Ailuropoda melanoleuca]
gi|444515106|gb|ELV10768.1| Gamma-secretase subunit APH-1A [Tupaia chinensis]
Length = 265
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|149030630|gb|EDL85667.1| anterior pharynx defective 1a homolog (C. elegans), isoform CRA_a
[Rattus norvegicus]
Length = 265
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|395856055|ref|XP_003800458.1| PREDICTED: gamma-secretase subunit APH-1A [Otolemur garnettii]
Length = 265
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|426216484|ref|XP_004002492.1| PREDICTED: gamma-secretase subunit APH-1A isoform 1 [Ovis aries]
Length = 265
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|149751205|ref|XP_001489214.1| PREDICTED: gamma-secretase subunit APH-1A-like isoform 1 [Equus
caballus]
Length = 265
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|41056229|ref|NP_956409.1| gamma-secretase subunit Aph-1b [Danio rerio]
gi|37077309|sp|Q8JHE9.1|APH1B_DANRE RecName: Full=Gamma-secretase subunit Aph-1b; AltName:
Full=Anterior-pharynx-defective protein 1b
gi|22001127|gb|AAM88325.1|AF512428_1 Aph-1 protein [Danio rerio]
gi|37682171|gb|AAQ98012.1| anterior pharynx defective 1B-like [Danio rerio]
gi|47939453|gb|AAH71492.1| Anterior pharynx defective 1B [Danio rerio]
Length = 258
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 100/212 (47%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
MTVA G IA GP+++LF+ I++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MTVAVFFGCTFIAFGPAIALFMFTIARDPLRVIFLIAGAFFWLVSLLLSSLVWFITVQIS 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K++ LLI SV QE R ++++ K+ + L A + P Q
Sbjct: 61 NKNSATQQRGLLIFGVVLSVLLQEAFRYGYYRLLKKANEGLLALSQEDTMP----ISMRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GLG G F +++L+ + GP T + Q +F+ SA + LA + +H F
Sbjct: 117 LAYVSGLGFGFMSGAFSVVNILSDSLGPGTVGIHGESQ-HYFISSAFMTLAIILLHMFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F V HLV +T VN
Sbjct: 176 VVFFEACERQRWWALGAVVASHLVVSCLTFVN 207
>gi|431896610|gb|ELK06022.1| Gamma-secretase subunit APH-1A [Pteropus alecto]
Length = 265
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 61 --STTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
S + + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DPSDSRLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWTLGLVVGSHLLTSGLTFLN 207
>gi|90083290|dbj|BAE90727.1| unnamed protein product [Macaca fascicularis]
Length = 247
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L ++ P Q
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLAPLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 207
>gi|403302765|ref|XP_003942023.1| PREDICTED: gamma-secretase subunit APH-1A isoform 1 [Saimiri
boliviensis boliviensis]
Length = 346
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 82 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 141
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 142 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 197
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 198 MAYVSGLSFGIISGVFSVINILADALGPGVVGIHGDSPY-YFLTSAFLTAAIILLHTFWG 256
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 257 VVFFDACERRRYWALGLVVGSHLLTSGLTFLN 288
>gi|432114300|gb|ELK36228.1| Gamma-secretase subunit APH-1A [Myotis davidii]
Length = 247
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 61 --STTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DPSDARLQYGLLIFGAAVSVLLQEMFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWTLGLVVGSHLLTSGLTFLN 207
>gi|417397795|gb|JAA45931.1| Putative conserved plasma membrane protein [Desmodus rotundus]
Length = 247
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 96/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 61 --STTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
S + LLI SV QE R ++K+ K+ ++ L + ++ P Q
Sbjct: 61 DPSDARLQYGLLIFGAAVSVLLQEVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GL G+ VF +++L A GP + +FL SA + A + +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ V HL+ +T +N
Sbjct: 176 VVFFDACERRRYWTLGLVVGSHLLTSGLTFLN 207
>gi|327288014|ref|XP_003228723.1| PREDICTED: gamma-secretase subunit APH-1A-like [Anolis
carolinensis]
Length = 265
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 96/213 (45%), Gaps = 12/213 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW--RAFLP 58
M A G IA GP+L+L + ++ P ++ +++ WL+SL++ S IW L
Sbjct: 1 MGAAVFFGCTFIAFGPALALCLLTVAGDPLRVIILVAGAFFWLVSLLLASLIWFISVHLS 60
Query: 59 LKSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+ LL+ SV QE R ++K+ K+ ++ L ++ P Q
Sbjct: 61 DREDGRLQHGLLMFGAAISVLLQEAFRFAYFKLLKKADEGLVTISEDGRSP----ISIKQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GL G+ VF +++L + GP T + P +F+ SA + +A V +HTF
Sbjct: 117 MAYVSGLSFGIISGVFSVINILADSIGPGTVGIHGDSPH--YFITSAFLTMAIVLLHTFW 174
Query: 175 MVIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
I F+ + V HL+ +T +N
Sbjct: 175 GTIFFDACEKRCYWKLALVVASHLMTSGLTFLN 207
>gi|395502615|ref|XP_003755674.1| PREDICTED: gamma-secretase subunit Aph-1b isoform 1 [Sarcophilus
harrisii]
Length = 258
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 10/191 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A G IA GP+L+L+V I+ P I+ +++ WL+SL++ S IW + L
Sbjct: 1 MTAAVFFGCTCIAFGPALALYVFTIASDPLRIIFLIAGAFFWLVSLLLSSLIWFVAVTLS 60
Query: 61 STTWWPF--ALLI---ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
ST LLI + SV QE R ++++ K+ L + P Q
Sbjct: 61 STKDESVQKGLLIFGVLCSVLIQEVFRFAYYRLLKKANKGLMTISQEETSP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GLG G+ VF +++L+ + GP + P FFL SA + L V +H F
Sbjct: 117 LAYVSGLGFGIMSGVFSLVNILSDSLGPGIVGIHGDPPQ-FFLASAFMTLVMVLLHVFWG 175
Query: 176 VIAFNGYAEGN 186
V+ F+ N
Sbjct: 176 VVFFDACETKN 186
>gi|290462079|gb|ADD24087.1| Gamma-secretase subunit Aph-1 [Lepeophtheirus salmonis]
Length = 255
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPF 67
G L A G ++F+ I+ P I+ ++ S+ WLISL++ S W A +PL+
Sbjct: 8 GTLLTAFGAPSAMFIFTIAPDPVRIILLVLSSFFWLISLLISSLWWFAVVPLRHEP---- 63
Query: 68 ALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALAGGLGHGV 126
++ SV FQE R+L + + + +F ++ + DK I A G G G+
Sbjct: 64 VFGLVFSVAFQEIFRILLYLLLFKAR----SFMSKLTENDPIFGDKPHILAYVLGFGFGI 119
Query: 127 AHAVFFCLSLLTPAFGPATFYV---DRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYA 183
+ +F +++L + GP T + D FF+ SA+ +LA V HT VIAF+
Sbjct: 120 SSGLFGLVNVLADSLGPGTLGIKGGDFGVSRHFFIFSALFSLAIVLCHTAWGVIAFSACE 179
Query: 184 EGNTTDQYFVPVVHLVAGMVTLVN 207
E V +H ++L+N
Sbjct: 180 EKKYLRLVTVWAMHYALSGISLLN 203
>gi|71834416|ref|NP_001025300.1| gamma-secretase subunit APH-1A [Danio rerio]
gi|66911405|gb|AAH97248.1| Zgc:114200 [Danio rerio]
Length = 253
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/214 (28%), Positives = 109/214 (50%), Gaps = 14/214 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+A G A IA GP+ +LFV ++K P ++ +++ WL+SL++ S +W F+ +K
Sbjct: 1 MTLAVFFGCAFIAFGPAFALFVFTVAKDPLRVIILIAGAFFWLLSLLLSSLVW--FIAVK 58
Query: 61 STTWW----PFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDK 113
++ P LLI SV QE R ++++ ++ + L A +D
Sbjct: 59 ASNSQDPSLPRGLLIFGVFFSVLLQEVFRFAYYRLLRKATEGLAAISDDASSA----ISV 114
Query: 114 MQIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTF 173
Q+A GLG GV F +++L+ + GP T + Q +F+ +A++ LA +HTF
Sbjct: 115 RQMAYVAGLGFGVMRGAFSMINILSDSLGPGTVGIFGDSQY-YFITAALMTLALTLLHTF 173
Query: 174 SMVIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F G + + V +HL+ ++L+N
Sbjct: 174 WGVLFFEGCEKSSWWVIAVVVSLHLLVAGLSLLN 207
>gi|290563082|gb|ADD38935.1| Gamma-secretase subunit Aph-1 [Lepeophtheirus salmonis]
Length = 255
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 96/204 (47%), Gaps = 12/204 (5%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPF 67
G L A G ++F+ I+ P I+ ++ S+ WLISL++ S W A +PL+
Sbjct: 8 GTFLTAFGAPSAMFIFTIAPDPVRIILLVLSSFFWLISLLISSLWWFAVVPLRHEP---- 63
Query: 68 ALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALAGGLGHGV 126
++ SV FQE R+L + + + +F ++ + DK I A G G G+
Sbjct: 64 VFGLVFSVAFQEIFRILLYLLLFKAR----SFMSKLTENDPIFGDKPHILAYVLGFGFGI 119
Query: 127 AHAVFFCLSLLTPAFGPATFYV---DRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYA 183
+ +F +++L + GP T + D FF+ SA+ +LA V HT VIAF+
Sbjct: 120 SSGLFGLVNVLADSLGPGTLGIKGGDFGVSRHFFIFSALFSLAIVLCHTAWGVIAFSACE 179
Query: 184 EGNTTDQYFVPVVHLVAGMVTLVN 207
E V +H ++L+N
Sbjct: 180 EKKYLRLVTVWAMHYALSGISLLN 203
>gi|321460307|gb|EFX71350.1| hypothetical protein DAPPUDRAFT_308872 [Daphnia pulex]
Length = 250
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 103/200 (51%), Gaps = 8/200 (4%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPF 67
G A +A GP L++F+ I+K P I+ +++S WL+SL+ S +W + L S P
Sbjct: 8 GCAFLAFGPPLAMFLLTIAKDPIRIIILIASAFFWLLSLLTSSLLWLVAVTLHS----PI 63
Query: 68 ALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVA 127
+ +I SV FQE R L + + ++ E L + +T+K +A GLG G+
Sbjct: 64 VVGVIFSVLFQELFRYLIYLLLRKAEVGLKKLTE---SDTAIITNKNILAYVSGLGFGII 120
Query: 128 HAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNT 187
F +++L A GP T + + FFL SA++ L F+ +HT V+ F+ +
Sbjct: 121 SGTFSLVNVLADATGPGTVGLHGDSNL-FFLTSALLTLCFILLHTAWGVLFFHALDKKKY 179
Query: 188 TDQYFVPVVHLVAGMVTLVN 207
+V + HL+ ++TL+N
Sbjct: 180 LALVWVVMSHLLVSLLTLMN 199
>gi|242014226|ref|XP_002427792.1| gamma-secretase subunit Aph-1, putative [Pediculus humanus
corporis]
gi|212512261|gb|EEB15054.1| gamma-secretase subunit Aph-1, putative [Pediculus humanus
corporis]
Length = 227
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 95/198 (47%), Gaps = 10/198 (5%)
Query: 10 ALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPFAL 69
A I GP L++FV I+ P I+ +++S + +LS +P + ++
Sbjct: 3 ACIPFGPPLAMFVCTIALDPIRIIILIASAFF-WLLSFLLSSFLWFIIPGQHLSYG---- 57
Query: 70 LIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAHA 129
++ SV FQE R + +K+ + E L D + + +K +A GLG G+
Sbjct: 58 -LLYSVLFQELFRFIVYKLIRSAEGGLKKITDNETQ---IIENKHILAYVAGLGFGIMSG 113
Query: 130 VFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNTTD 189
+F +++L + GPAT + + + FF+ SA L F+ +HTF VI F+ N +
Sbjct: 114 LFALINVLADSLGPATMGLHQGSE-KFFMTSAATTLCFILLHTFWGVIFFSAADSKNYIN 172
Query: 190 QYFVPVVHLVAGMVTLVN 207
+V + HL+ +T N
Sbjct: 173 ITWVLLTHLIVSALTFFN 190
>gi|417397944|gb|JAA46005.1| Putative conserved plasma membrane protein [Desmodus rotundus]
Length = 257
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 13/192 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ +P I+ ++ WL+SL++ S +W R
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVITIATEPLRIIFLIVGAFFWLVSLLLSSLVWFMARTIT 60
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + + L+ ++ SV QE R ++K+ K+ + L P + L
Sbjct: 61 DNKDESVQKYLLIFGVLISVLIQEMFRFAYYKLLKKANEGLKIVNPDEPAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GL G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLDFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLNSAFMTLVIILLHMFW 173
Query: 175 MVIAFNGYAEGN 186
++ F+G + N
Sbjct: 174 GIVFFDGCEKKN 185
>gi|339237585|ref|XP_003380347.1| protein dif-1 [Trichinella spiralis]
gi|316976828|gb|EFV60037.1| protein dif-1 [Trichinella spiralis]
Length = 1132
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 58/229 (25%), Positives = 94/229 (41%), Gaps = 19/229 (8%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPF 67
GY LIA G L++F+ VI P I+ + + ++IS+++ + IW +
Sbjct: 869 GYFLIAFGTPLAIFLCVIMHDPMRIILFVGAAFFYMISILLAAIIWFILPHFDGILCFTV 928
Query: 68 ALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFA---DRVGKPRLFLTDKMQIALAGGLGH 124
L + QE +R L++K+ +R + LD D V I+ G+G
Sbjct: 929 FLFVF----LQEVIRYLYYKLIRRAQAGLDVVTEGNDSVEGVHPLKHANHMISFVIGMGF 984
Query: 125 GVAHAVFFCLSLLTPAFGPATF-------YVDRCPQMPFFLISAIIALAFVTIHTFSMVI 177
G V ++ L + GP T + D FFLIS+I A + +H VI
Sbjct: 985 GSMAGVIALVNGLADSSGPGTVGLPSALKFNDMHGSYHFFLISSISVAALILLHVMWNVI 1044
Query: 178 AFNGYAEGNTTDQYFVPVVHLVAGMVTLVN-----FASGGCVVGIPLLY 221
F+ + T F H + ++ N AS C+ G LL+
Sbjct: 1045 IFHACDKKATWLAMFAIADHFLVAGISFYNRSNVWAASLSCLYGSLLLF 1093
>gi|432958682|ref|XP_004086105.1| PREDICTED: gamma-secretase subunit Aph-1b-like [Oryzias latipes]
Length = 258
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 99/212 (46%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW--RAFLP 58
MT A G IA GP++SLF+ I+++P ++ +++ WL+SL++ S +W +
Sbjct: 1 MTAAVFFGCTFIAFGPAISLFLFTIAREPLRVIFLIAGAFFWLVSLLLSSLVWFISVQIS 60
Query: 59 LKSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + LLI SV QE R ++K+ K+ + L + P Q
Sbjct: 61 NKESAAQQKGLLIFGVVLSVLLQETFRFGYYKLLKKANEGLLTLSQEETMP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GLG G F +++L + GP T + Q +FL SA + +A + +H F
Sbjct: 117 LAYVSGLGFGFMSGAFSVVNILADSAGPGTIGIHGDSQ-HYFLSSAFMTMAIILLHMFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ + V +VHL+ +T N
Sbjct: 176 VVFFDACEKRCWWAVGLVVIVHLLVSCLTFQN 207
>gi|410912369|ref|XP_003969662.1| PREDICTED: gamma-secretase subunit Aph-1b-like [Takifugu rubripes]
Length = 258
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 97/212 (45%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW--RAFLP 58
MT A G IA GP++SLFV I+++P ++ +++ WL+SL++ S +W +
Sbjct: 1 MTAAVFFGCTFIAFGPAISLFVFTIAREPLRVIFLIAGAFFWLVSLLLSSLVWFISVQIS 60
Query: 59 LKSTTWWPFALLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + LLI SV QE R ++K+ K+ + L + P Q
Sbjct: 61 NKESASQQKGLLIFGVVLSVVLQETFRFGYYKLLKKANEGLLTLSQEETMP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GLG G F +++L + GP T + Q +FL SA + +A + +H F
Sbjct: 117 LAYVSGLGFGFMSGAFSVVNILADSVGPGTVGIHGDSQY-YFLSSAFMTMAIILLHMFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ + V + HL +T N
Sbjct: 176 VVFFDACEKQRWWAVAAVVISHLAVSCLTFQN 207
>gi|225711918|gb|ACO11805.1| Gamma-secretase subunit Aph-1 [Lepeophtheirus salmonis]
Length = 255
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 95/204 (46%), Gaps = 12/204 (5%)
Query: 8 GYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPF 67
G L A G ++F+ I+ P I+ ++ S+ WLISL++ S W A +PL+
Sbjct: 8 GTLLTAFGAPSAMFIFTIAPDPVRIILLVLSSFFWLISLLISSLWWFAVVPLRHEP---- 63
Query: 68 ALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALAGGLGHGV 126
++ SV FQE R+L + + + +F ++ + DK I A G G G+
Sbjct: 64 VFGLVFSVAFQEIFRILLYLLLFKAR----SFMSKLTENDPIFGDKPHILAYVLGFGFGI 119
Query: 127 AHAVFFCLSLLTPAFGPATFYV---DRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYA 183
+ +F +++L + GP T + D FF+ SA+ +L V HT VIAF+
Sbjct: 120 SSGLFGLVNVLADSLGPGTLGIKGGDFGVSRHFFIFSALFSLVIVLCHTAWGVIAFSACE 179
Query: 184 EGNTTDQYFVPVVHLVAGMVTLVN 207
E V +H ++L+N
Sbjct: 180 EKKYLRLVTVWAMHYALSGISLLN 203
>gi|334314471|ref|XP_003340043.1| PREDICTED: LOW QUALITY PROTEIN: gamma-secretase subunit APH-1B-like
[Monodelphis domestica]
Length = 258
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A G IA GP+L+L+V I+ P I+ +++ WL+SL++ S IW + +
Sbjct: 1 MTAAVFFGCTCIAFGPALALYVFTIASDPLRIIFLIAGAFFWLVSLLLSSLIWFVAVTIS 60
Query: 61 STTWWPF--ALLI---ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
ST LLI + SV QE R ++++ K+ L + P Q
Sbjct: 61 STKNESVQRGLLIFGVLCSVIIQEVFRFAYYRLLKKANKGLMTISQEETAP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GLG G+ VF +++L+ + GP + P FFL SA + L V +H F
Sbjct: 117 LAYVSGLGFGIMSGVFSLVNILSDSLGPGIVGIHGDPPQ-FFLASAFMTLVMVLLHVFWG 175
Query: 176 VIAFNGYAEGN 186
V+ F+ E N
Sbjct: 176 VVFFDA-CETN 185
>gi|26324468|dbj|BAC25988.1| unnamed protein product [Mus musculus]
gi|74200360|dbj|BAE36975.1| unnamed protein product [Mus musculus]
gi|148694181|gb|EDL26128.1| mCG130387, isoform CRA_c [Mus musculus]
Length = 212
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 13/180 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ P ++ +++ WL+SL++ S W R
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATDPLRVIFLIAGAFFWLVSLLLSSVFWFLVRVIT 60
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+ + L+ ++ SV QE R+ ++K+ K+ + L + P + L
Sbjct: 61 DNRDGPVQNYLLIFGVLLSVCIQELFRLAYYKLLKKASEGLKSINPEETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL S I+ + + I++ S
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSNSLGPGTVGIHGDSPQ--FFLNSVRISASPMDINSVS 173
>gi|148694180|gb|EDL26127.1| mCG130387, isoform CRA_b [Mus musculus]
Length = 236
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 89/180 (49%), Gaps = 13/180 (7%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ P ++ +++ WL+SL++ S W R
Sbjct: 25 MTAAVFFGCAFIAFGPALALYVFTIATDPLRVIFLIAGAFFWLVSLLLSSVFWFLVRVIT 84
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+ + L+ ++ SV QE R+ ++K+ K+ + L + P + L
Sbjct: 85 DNRDGPVQNYLLIFGVLLSVCIQELFRLAYYKLLKKASEGLKSINPEETAPSMRL----- 139
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL S I+ + + I++ S
Sbjct: 140 LAYVSGLGFGIMSGVFSFVNTLSNSLGPGTVGIHGDSPQ--FFLNSVRISASPMDINSVS 197
>gi|324514565|gb|ADY45911.1| Gamma-secretase subunit aph-1 [Ascaris suum]
Length = 310
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT AGI Y LIA P+L++F VI+ P I+ + WL+SL+ + IW A +PL+
Sbjct: 1 MTAFAGIAYLLIAFSPALAIFHKVIASDPLRIILFVLGAFFWLLSLLFSALIWYAAVPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADR---VGKPRLFLTDKMQIA 117
+T FA+ I S+ QE R++ + + K+ + L A + + +A
Sbjct: 61 NTL--VFAVCI--SIALQELARLVHFILLKKAQKGLSKMAANGMHISGVHTLHHARHMLA 116
Query: 118 LAGGLGHGVAHAVFFCLSLLTPAFG------PATF--YVDR------CPQMPFFLISAII 163
+ GLG GV A+F ++++ +G PAT DR F L ++
Sbjct: 117 VVCGLGMGVMAALFLIINVIADFWGNGTVGLPATIPEVADRFDVKLFAKDEKFPLTYSLS 176
Query: 164 ALAFVTIHTFSMVIAFNGYAEGNTTDQYFVPVVHLVAG 201
A H ++ ++G + T+ +++ + +VA
Sbjct: 177 ACILTLCHMCWTILFWDGCHKKKHTNTWWISIAFVVAS 214
>gi|449275458|gb|EMC84321.1| Gamma-secretase subunit APH-1A, partial [Columba livia]
Length = 231
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 96/199 (48%), Gaps = 14/199 (7%)
Query: 16 PSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPFALL----- 70
P+ LFV I++ P I+ +++ WL+SL++ S IW F+ +K++ L
Sbjct: 1 PAFGLFVFTIARDPLRIIILIAGAFFWLVSLLLSSLIW--FIAVKASDPRDEPLQKGLLI 58
Query: 71 --IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAH 128
++ SV QE R L++K+ ++ + L A ++ P Q+A G+G G+
Sbjct: 59 FGVMFSVLLQEAFRFLYYKLLRKAIEGLVALSEDGCSP----ISIQQMAYVAGVGFGLMS 114
Query: 129 AVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNTT 188
F ++LL A GP T + Q+ +FL SA + + + +HTF ++ F+G
Sbjct: 115 GAFSMINLLADALGPGTVGIYGDSQL-YFLTSAFMTMVLIFLHTFWGILFFHGCEHRRWW 173
Query: 189 DQYFVPVVHLVAGMVTLVN 207
+ V V+HL T N
Sbjct: 174 EITAVVVMHLAVSGSTFFN 192
>gi|348545661|ref|XP_003460298.1| PREDICTED: gamma-secretase subunit Aph-1b-like [Oreochromis
niloticus]
Length = 258
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 10/212 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW--RAFLP 58
MT A G IA GP+++LF+ I+++P ++ +++ WL+SL++ S +W +
Sbjct: 1 MTAAVFFGCTFIAFGPAIALFLFTIAREPLRVIFLIAGAFFWLVSLLLSSLVWFISVQIS 60
Query: 59 LKSTTWWPFALLI---ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + LLI + SV QE R ++K+ K+ + L + P Q
Sbjct: 61 NKESAAQQKGLLIFGVVLSVLLQETFRFAYYKLLKKANEGLLTLSQEETMP----ISIRQ 116
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A GLG G F +++L + GP T + Q +FL SA + +A + +H F
Sbjct: 117 LAYVSGLGFGFMSGAFSVVNILADSAGPGTVGIHGDSQ-HYFLSSAFMTMAIILLHMFWG 175
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
V+ F+ + V + HL+ +T N
Sbjct: 176 VVFFDACEKQRWWAVGAVVISHLLVSCLTFQN 207
>gi|126313758|ref|XP_001370546.1| PREDICTED: gamma-secretase subunit APH-1A-like [Monodelphis
domestica]
Length = 265
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 10/201 (4%)
Query: 12 IALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL--KSTTWWPFAL 69
+ GP SLF+ ++P + + + WL+SL++ S +W + + +S T + L
Sbjct: 12 VGFGPGFSLFLVTGGREPLPGIILGAWAFFWLVSLLLASVVWFILVHVTDQSDTRLQYGL 71
Query: 70 LIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGV 126
LI SV QE R ++K+ K+ ++ L + ++ P Q+A GL G+
Sbjct: 72 LIFGAALSVLLQEAFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQMAYVSGLSFGI 127
Query: 127 AHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGN 186
VF +++L A GP + +FL SA + A + +HTF ++ F+
Sbjct: 128 ISGVFSVINILADALGPGVVGI-HGDSPYYFLTSAFLTAAIILLHTFWGIVFFDACERRR 186
Query: 187 TTDQYFVPVVHLVAGMVTLVN 207
V HL+ +T +N
Sbjct: 187 YWALGLVVGSHLLTSGLTFLN 207
>gi|431895936|gb|ELK05354.1| Gamma-secretase subunit APH-1B [Pteropus alecto]
Length = 257
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 13/187 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A G A +A GP+L+L++ I+ +P I+ ++ WL+SL++ S +W +
Sbjct: 1 MTAAVFFGCAFVAFGPALALYIFTIAAEPLRIIFLIVGAFFWLLSLLLSSLVWFMAGSIT 60
Query: 61 STTWWPFA--LLIIS---SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
+ P LLI SV QE R ++++ K+ + L P + L
Sbjct: 61 DSKDGPVQKHLLIFGVLVSVLIQEMFRFAYYRLLKKANEGLKVINPDETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSNSLGPGTVGIHGDSPQ--FFLNSAFMTLVIMLLHMFW 173
Query: 175 MVIAFNG 181
++ F+G
Sbjct: 174 GIVFFDG 180
>gi|56757001|gb|AAW26672.1| SJCHGC06550 protein [Schistosoma japonicum]
Length = 313
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 54/97 (55%), Gaps = 4/97 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT G+G LI LGP L LF+ ++ P ++ + +S WLISL++ S IW +PL+
Sbjct: 1 MTYLGGLGCTLIGLGPCLILFLCTVASCPIRVILLTASGFFWLISLLITSVIWFIVIPLR 60
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLD 97
T+ F +LI V QE LR LF+ + + E L
Sbjct: 61 --TYLAFGILI--GVLIQEVLRFLFFLLIVKAESGLQ 93
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 42/96 (43%)
Query: 112 DKMQIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIH 171
D +A GLG+G+ + L +L ++GP F FFL ++ + +
Sbjct: 171 DHRTVAYVSGLGYGLMSCIIQLLRILIDSYGPGIFMYSTWDSKTFFLFASCQCMCISMLQ 230
Query: 172 TFSMVIAFNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
F +I F G+ + + FV +H ++L+N
Sbjct: 231 VFWSLILFTGFVQRVYSQIIFVYSMHFGLAALSLIN 266
>gi|413936391|gb|AFW70942.1| hypothetical protein ZEAMMB73_346695, partial [Zea mays]
Length = 86
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 38/49 (77%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVL 49
MT+AAG+GYALIALGP+ SLF V+ +KPFL+LT+LS + + ++L
Sbjct: 38 MTLAAGLGYALIALGPAFSLFSGVVVRKPFLVLTLLSRSTPCVARFVLL 86
>gi|357614718|gb|EHJ69231.1| hypothetical protein KGM_12905 [Danaus plexippus]
Length = 240
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 13/209 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A +L+A G L++F I+ P I+ ++++ WL+S ++ S +W A +PL+
Sbjct: 1 MTAAEFFSCSLLAFGAPLAMFALTIANDPVRIIIMIAAAFFWLLSFLLSSMLWYAVVPLR 60
Query: 61 STTWWP--FALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIAL 118
S + FA+LI QE R + + KR E L + + ++K +IA
Sbjct: 61 SYLAFGMVFAILI------QETFRFGVYLLLKRTESGL----KEISENHEIGSNKAEIAY 110
Query: 119 AGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIA 178
G G G F +++L + GP T + + FF+ SA + L ++TF VI
Sbjct: 111 VSGFGFGAMSGAFAIINVLADSIGPGTLGLRHGTEY-FFVTSASMTLCMTLLNTFWTVIF 169
Query: 179 FNGYAEGNTTDQYFVPVVHLVAGMVTLVN 207
FNG + +V H + ++L+N
Sbjct: 170 FNGLDNKSYLKILWVIGSHFLVSGLSLLN 198
>gi|195654671|gb|ACG46803.1| hypothetical protein [Zea mays]
Length = 49
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/39 (66%), Positives = 34/39 (87%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSST 39
MT+AAG+GYALIALGP+ SLF V+ +KPFL+LT+LS +
Sbjct: 1 MTLAAGLGYALIALGPAFSLFSGVVVRKPFLVLTLLSRS 39
>gi|449514237|ref|XP_002191104.2| PREDICTED: uncharacterized protein LOC100229050 [Taeniopygia
guttata]
Length = 473
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 12 IALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPFALL- 70
I L P LF+ I++ P I+ +++ WL+SL++ S IW F+ +K++ L
Sbjct: 230 IKLSP-FGLFIFTIARDPLRIIILIAGAFFWLVSLLLSSLIW--FIAVKASDPQDERLQK 286
Query: 71 ------IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGH 124
++ SV QE R L++K+ ++ + L A ++ P Q+A G+G
Sbjct: 287 GLLIFGVMFSVLLQEAFRFLYYKLLRKAIEGLVALSEDGCSP----ISIQQMAYVAGVGF 342
Query: 125 GVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAE 184
G+ F ++LL A GP T + Q+ +FL SA + + + +HTF ++ F+G
Sbjct: 343 GLMSGAFSMINLLADALGPGTVGIHGDSQL-YFLTSAFMTMVLIFLHTFWGILFFHGCEH 401
Query: 185 GNTTDQYFVPVVHLVAGMVTLVN 207
+ V ++HL ++ N
Sbjct: 402 RRWWEITAVVIMHLTVSGLSFCN 424
>gi|348555587|ref|XP_003463605.1| PREDICTED: gamma-secretase subunit APH-1B-like isoform 1 [Cavia
porcellus]
Length = 216
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 66/137 (48%), Gaps = 5/137 (3%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A G A IA GP+L+LFV I+ KP I+ +++ WL+SL++ S IW P+
Sbjct: 1 MTAAVFFGCAFIAFGPALALFVFTIATKPLRIIFLIAGAFFWLVSLLISSLIWFLATPIT 60
Query: 61 STTWWP---FALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
P F L+ ++ S+ QE R ++++ K+ L + P + L
Sbjct: 61 DNKDGPTQKFLLIFGVLPSIFIQEMFRFAYYRLLKKASKGLKSINPDEAAPSMQLLGYAF 120
Query: 116 IALAGGLGHGVAHAVFF 132
+ LA L H VFF
Sbjct: 121 MTLAIILLHVFWGIVFF 137
>gi|326933472|ref|XP_003212827.1| PREDICTED: gamma-secretase subunit APH-1A-like [Meleagris
gallopavo]
Length = 310
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 87/193 (45%), Gaps = 14/193 (7%)
Query: 23 AVISKKPFLILTVL--SSTLLWLISLIVLSGIW--RAFLPLKSTTWWPFALLIIS---SV 75
+++SK F TVL WL+SL++ S IW L + + LL+ SV
Sbjct: 66 SIVSKLQFSNGTVLLVGGRFFWLVSLLLASLIWFISVHLSDQGNARLQYGLLVFGAAVSV 125
Query: 76 GFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAVFFCLS 135
QE R ++K+ K+ ++ L ++ P Q+A GL G+ VF ++
Sbjct: 126 LLQEAFRFAYFKLLKKADEGLATISEDGRSP----ISLKQMAYVSGLSFGIISGVFSVIN 181
Query: 136 LLTPAFGPATFYVDRCPQMPFFLI-SAIIALAFVTIHTFSMVIAFNGYAEGNTTDQYFVP 194
+L + GP + P++ I SA + +A V +HTF VI F+ + V
Sbjct: 182 ILADSIGPGIVGIH--GDSPYYFITSAFLTMAVVLLHTFWGVIFFDACEKRRYWCLGLVV 239
Query: 195 VVHLVAGMVTLVN 207
+ HLV +T +N
Sbjct: 240 ISHLVTSGLTFLN 252
>gi|395535983|ref|XP_003770000.1| PREDICTED: gamma-secretase subunit APH-1A [Sarcophilus harrisii]
Length = 273
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 12/190 (6%)
Query: 24 VISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL--KSTTWWPFALLIIS---SVGFQ 78
+I P + +LS WL+SL++ S +W + + +S + LLI SV Q
Sbjct: 32 LIKCPPIRVDFLLSGAFFWLVSLLLASVVWFILVHVTDQSDARLQYGLLIFGAAVSVLLQ 91
Query: 79 EGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAVFFCLSLLT 138
E R ++K+ K+ ++ L + ++ P Q+A GL G+ VF +++L
Sbjct: 92 EVFRFAYYKLLKKADEGLASLSEDGRSP----ISIRQMAYVSGLSFGIISGVFSVINILA 147
Query: 139 PAFGPATFYVDRCPQMPF-FLISAIIALAFVTIHTFSMVIAFNGYAEGNTTDQYFVPVVH 197
A GP + PF FL SA + A + +HTF ++ F+ V H
Sbjct: 148 DALGPGVVGIH--GDSPFYFLTSAFLTAALILLHTFWGIVFFDACERRRYWALGLVVGSH 205
Query: 198 LVAGMVTLVN 207
L+ +T +N
Sbjct: 206 LLTSGLTFLN 215
>gi|66828211|ref|XP_647460.1| gamma-secretase subunit Aph-1 [Dictyostelium discoideum AX4]
gi|74859324|sp|Q55FS3.1|APH1_DICDI RecName: Full=Gamma-secretase subunit Aph-1
gi|60475506|gb|EAL73441.1| gamma-secretase subunit Aph-1 [Dictyostelium discoideum AX4]
Length = 328
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 2/101 (1%)
Query: 119 AGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIA 178
A G+G GVA+ S+L + GP T + CP + F++S+II L +H V+A
Sbjct: 200 AIGVGSGVAYGFIMFGSILWESTGPGTLFSPACPSVNLFMLSSIITLFMTLLHVVYNVLA 259
Query: 179 FNGYAEGNTTDQYFVPVVHLVAGMVTLVNF--ASGGCVVGI 217
F GY FV + H V +TL+N + CV I
Sbjct: 260 FQGYRSKKYHLVAFVIITHFVTTYLTLLNLPTKTTSCVGSI 300
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 13/119 (10%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT G I P L+ F VI+K L++ + + WL+S I+++ IW +P
Sbjct: 1 MTQVLFYGCLFITFSPILAFFFMVIAKNSQLVILTIGGSFFWLVS-ILIAAIWWYIIPPM 59
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALA 119
WW +I SV FQE R +F+++Y F DR P L + Q +A
Sbjct: 60 REHWW---FIISFSVLFQEIFRYIFFRLYSY------GFNDR---PSLNQIKETQHQMA 106
>gi|335279581|ref|XP_003353379.1| PREDICTED: gamma-secretase subunit APH-1B-like, partial [Sus
scrofa]
Length = 159
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 79/165 (47%), Gaps = 11/165 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ +P I+ ++ WL+SL++ S +W
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATEPLRIILLIIGAFFWLVSLLLSSLVWFMATTIT 60
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQ 115
K + L+ ++ SV QE R ++K+ K+ + L + P + L
Sbjct: 61 DNKDERVQKYLLIFGVLVSVLIQETFRFAYYKLLKKASEGLKSLNPDETAPSMRL----- 115
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLIS 160
+A GLG G+ VF ++ L+ + GP T + P FFL S
Sbjct: 116 LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDPPQ-FFLNS 159
>gi|344251052|gb|EGW07156.1| Gamma-secretase subunit APH-1B [Cricetulus griseus]
Length = 219
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 41/182 (22%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A G A IA GP+L+L+V I+ P + +++ WL+SL+
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATDPLRVTFLIAGAFFWLVSLL------------- 47
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAG 120
+SSV FW + + + D D + L + +++
Sbjct: 48 -----------LSSV---------FWYLVRIITDNKDG-----PIQKYLLIFGVLLSVFS 82
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFSMVIAF 179
GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F ++ F
Sbjct: 83 GLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLNSAFMTLVIILLHVFWGIVFF 140
Query: 180 NG 181
+G
Sbjct: 141 DG 142
>gi|440907017|gb|ELR57210.1| Gamma-secretase subunit APH-1B, partial [Bos grunniens mutus]
Length = 236
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 72/164 (43%), Gaps = 15/164 (9%)
Query: 25 ISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWP-------FALLIISSVGF 77
I +P I+ ++ WL+SL+ S IW L P F +LI SV
Sbjct: 4 IVTEPLRIIFLIIGAFFWLVSLLFSSLIWFTTATLIGNKDEPREKYLLIFGVLI--SVLI 61
Query: 78 QEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAVFFCLSLL 137
QE R ++K+ K+ + L P + L +A GLG G+ VF ++ L
Sbjct: 62 QEMFRFAYYKLLKKASEGLKTINPYEKAPSMRL-----LAYVSGLGFGIMSGVFSFVNTL 116
Query: 138 TPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNG 181
+ + GP T + P FFL SA + L +H F ++ F+G
Sbjct: 117 SDSLGPGTVGIHGDPPQ-FFLYSAFMTLVITLLHVFWGIVFFDG 159
>gi|426379397|ref|XP_004056384.1| PREDICTED: gamma-secretase subunit APH-1B [Gorilla gorilla gorilla]
Length = 275
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 42 WLISLIVLSGIW---RAFLPLKSTTWWPFALLIIS--SVGFQEGLRVLFWKVYKRLEDTL 96
WL+SL++ S +W R + K + L+ + SV QE R ++K+ K+ + L
Sbjct: 60 WLVSLLISSLVWFMARVIIDNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYKLLKKASEGL 119
Query: 97 DAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMP 155
+ P + L +A GLG G+ VF ++ L+ + GP T + PQ
Sbjct: 120 KSINPGETAPSMRL-----LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ-- 172
Query: 156 FFLISAIIALAFVTIHTFSMVIAFNG 181
FFL SA + L + +H F ++ F+G
Sbjct: 173 FFLYSAFMTLVIILLHVFWGIVFFDG 198
>gi|355668899|gb|AER94342.1| anterior pharynx defective 1-like protein B [Mustela putorius furo]
Length = 218
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 42 WLISLIVLSGIW---RAFLPLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTL 96
WL+SL+ S W R K + L+ ++ SV QE R +++K+ K+ + L
Sbjct: 4 WLVSLLFSSLFWFMARTITDNKDGPIQKYLLILGVLVSVLIQEMFRFVYYKLLKKASEGL 63
Query: 97 DAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMP 155
P + L +A GLG G+ VF ++ L+ + GP T + PQ
Sbjct: 64 KTINPDETAPSMRL-----LAYVSGLGFGIMSGVFAFVNTLSDSLGPGTVGIHGDSPQ-- 116
Query: 156 FFLISAIIALAFVTIHTFSMVIAFNG 181
FFL SA + L + +H F +I F+G
Sbjct: 117 FFLNSAFMTLVIILLHVFWGIIFFDG 142
>gi|224548987|ref|NP_001139118.1| gamma-secretase subunit APH-1B isoform 2 [Homo sapiens]
gi|114657500|ref|XP_001173827.1| PREDICTED: uncharacterized protein LOC467700 isoform 1 [Pan
troglodytes]
gi|397515498|ref|XP_003827987.1| PREDICTED: gamma-secretase subunit APH-1B [Pan paniscus]
gi|62533247|dbj|BAD95573.1| anterior pharynx defective 1b short splicing variant [Homo sapiens]
Length = 216
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ +P I+ +++ WL+SL++ S +W R +
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVII 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDA 98
K + L+ SV QE R ++K+ K+ + L +
Sbjct: 61 DNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYKLLKKASEGLKS 103
>gi|296237329|ref|XP_002763704.1| PREDICTED: gamma-secretase subunit APH-1B-like, partial [Callithrix
jacchus]
Length = 219
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 42 WLISLIVLSGIW---RAFLPLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTL 96
WL+SL++ S +W R K + L+ + SV QE R ++++ K+ + L
Sbjct: 4 WLVSLLISSLVWFMARVITDNKDGPIQKYLLIFGALVSVFIQEMFRFAYYRLLKKASEGL 63
Query: 97 DAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMP 155
+ + P + L +A GLG G+ VF ++ L+ + GP T + PQ
Sbjct: 64 KSISPGETAPSMRL-----LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ-- 116
Query: 156 FFLISAIIALAFVTIHTFSMVIAFNG 181
FFL SA + L + +H F ++ F+G
Sbjct: 117 FFLNSAFMTLVIILLHVFWGIVFFDG 142
>gi|119598050|gb|EAW77644.1| anterior pharynx defective 1 homolog B (C. elegans), isoform CRA_a
[Homo sapiens]
Length = 190
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ +P I+ +++ WL+SL++ S +W R +
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVII 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDA 98
K + L+ SV QE R ++K+ K+ + L +
Sbjct: 61 DNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYKLLKKASEGLKS 103
>gi|74000849|ref|XP_544714.2| PREDICTED: gamma-secretase subunit APH-1B [Canis lupus familiaris]
Length = 346
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 73/163 (44%), Gaps = 13/163 (7%)
Query: 28 KPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPFA-----LLIISSVGFQEGLR 82
K + + + WL+SL+ S W + + P L ++ SV QE R
Sbjct: 117 KRVVTIIKIHRAFFWLVSLLFSSLFWFVARTITANKDGPIQKYLLILGVLVSVLIQELFR 176
Query: 83 VLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAVFFCLSLLTPAFG 142
+++K+ K+ + L + P + L +A GLG G+ VF ++ L+ + G
Sbjct: 177 FVYYKLLKKASEGLKSINPDETTPSMRL-----LAYVSGLGFGIMSGVFAFVNTLSDSLG 231
Query: 143 PATFYVD-RCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAE 184
P T + PQ FFL SA + L + +H F +I F+G +
Sbjct: 232 PGTVGIHGDSPQ--FFLNSAFMTLVIILLHVFWGIIFFDGCEK 272
>gi|355692781|gb|EHH27384.1| Gamma-secretase subunit APH-1B, partial [Macaca mulatta]
Length = 223
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 40 LLWLISLIVLSGIW---RAFLPLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLED 94
WL+SL++ S +W R K + L+ SV QE R ++++ K+ +
Sbjct: 6 FFWLVSLLISSLVWFMARVITDNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYRLLKKASE 65
Query: 95 TLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQ 153
L + P + L +A GLG G+ VF ++ L+ + GP T + PQ
Sbjct: 66 GLKSINPGETAPSMRL-----LAYVSGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ 120
Query: 154 MPFFLISAIIALAFVTIHTFSMVIAFNG 181
FFL SA + L + +H F ++ F+G
Sbjct: 121 --FFLYSAFMTLVIILLHVFWGIVFFDG 146
>gi|403298219|ref|XP_003939928.1| PREDICTED: gamma-secretase subunit APH-1B isoform 2 [Saimiri
boliviensis boliviensis]
Length = 216
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ +P I+ +++ WL+SL++ S +W R
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVIT 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDA 98
K + L+ + SV QE R ++++ K+ + L +
Sbjct: 61 DNKDGPIQKYLLIFGALVSVFIQEMFRFAYYRLLKKASEGLKS 103
>gi|293361200|ref|XP_001079175.2| PREDICTED: gamma-secretase subunit APH-1B-like isoform 1 [Rattus
norvegicus]
Length = 216
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 57/115 (49%), Gaps = 5/115 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+LSL+V I+ P ++ +++ WL+SL++ S W R
Sbjct: 1 MTAAVFFGCAFIAFGPALSLYVFTIATDPLRVIFLIAGAFFWLVSLLLSSVFWFLVRVIT 60
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFL 110
+ + L+ ++ SV QE R+ ++++ K+ + L + P + L
Sbjct: 61 DNRDGPVQNYLLIFGVLLSVCIQELFRLAYYRLLKKANEGLKSINPEETAPSMRL 115
>gi|332235873|ref|XP_003267129.1| PREDICTED: gamma-secretase subunit APH-1B isoform 2 [Nomascus
leucogenys]
Length = 216
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 5/103 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ +P I+ +++ WL+SL++ S +W R
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATEPLRIIFLIAGAFFWLVSLLISSLVWFMARVIT 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDA 98
K + L+ SV QE R ++++ K+ + L +
Sbjct: 61 DNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYRLLKKASEGLKS 103
>gi|344251053|gb|EGW07157.1| Gamma-secretase subunit APH-1B [Cricetulus griseus]
Length = 196
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 81/183 (44%), Gaps = 43/183 (23%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A G A IA GP+L+L+V I+ P + +++ WL+SL+ L ++R
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATDPLRVTFLIAGAFFWLVSLL-LPSVFR------ 53
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGK-PRLFLTDKMQIALA 119
+ + II+ +R G + L ++ +++
Sbjct: 54 ------YLVRIIAE--------------------------NRDGPIQKYLLIFRVLLSVF 81
Query: 120 GGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFSMVIA 178
GLG G+ VF ++ L+ + GP T + PQ FFL SA + L + +H F ++
Sbjct: 82 SGLGFGIMSGVFSFVNTLSDSLGPGTVGIHGDSPQ--FFLNSAFMTLVIILLHVFWGIVF 139
Query: 179 FNG 181
F+G
Sbjct: 140 FDG 142
>gi|344293489|ref|XP_003418455.1| PREDICTED: gamma-secretase subunit APH-1B-like [Loxodonta africana]
Length = 272
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 13/160 (8%)
Query: 28 KPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPFA--LLIIS---SVGFQEGLR 82
KP LIL ++ ++ WL+SL++ S +W + P LLI SV QE R
Sbjct: 43 KPLLILYLMFTSFFWLVSLLLSSLVWFIAGTITGHKDGPVQKYLLIFGVLVSVLIQEAFR 102
Query: 83 VLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAVFFCLSLLTPAFG 142
++++ K+ + L A P + L +A GLG G+ VF ++ L+ + G
Sbjct: 103 FAYYRLLKKANEGLKAINPEETTPSMRL-----LAYVSGLGFGIMSGVFSFVNTLSDSLG 157
Query: 143 PATFYVD-RCPQMPFFLISAIIALAFVTIHTFSMVIAFNG 181
P T + PQ FF+ SA + L + +H F ++ F+G
Sbjct: 158 PGTVGIHGDSPQ--FFIHSAFMTLVIILLHIFWGIVFFDG 195
>gi|402874517|ref|XP_003901082.1| PREDICTED: gamma-secretase subunit APH-1B [Papio anubis]
Length = 216
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 5/103 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ P ++ +++ WL+SL++ S +W R
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIATDPLRVIFLIAGAFFWLVSLLISSLVWFMARVIT 60
Query: 58 PLKSTTWWPFALLI--ISSVGFQEGLRVLFWKVYKRLEDTLDA 98
K + L+ SV QE R ++++ K+ + L +
Sbjct: 61 DNKDGPTQKYLLIFGAFVSVYIQEMFRFAYYRLLKKASEGLKS 103
>gi|256080088|ref|XP_002576315.1| gamma-secretase subunit aph-1 [Schistosoma mansoni]
gi|350646020|emb|CCD59297.1| gamma-secretase subunit aph-1, putative [Schistosoma mansoni]
Length = 320
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT G+G LI +GP L LF+ ++ P ++ + +S WL+SL++ S +W PL+
Sbjct: 1 MTCLGGVGCTLIGVGPCLILFLCTVANCPIKVILLTASGFFWLVSLLITSVMWFIVTPLR 60
Query: 61 STTWWPFALLI 71
+ + F +LI
Sbjct: 61 A--YLAFGILI 69
>gi|395822285|ref|XP_003784451.1| PREDICTED: gamma-secretase subunit APH-1B isoform 2 [Otolemur
garnettii]
Length = 216
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+L+L+V I+ + I+ +++ WL+SL+ S +W RA
Sbjct: 1 MTAAVFFGCAFIAFGPALALYVFTIANESLRIIFLIAGAFFWLVSLLFSSLVWFVARAIT 60
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYKRLEDTLD 97
+ + L+ ++ SV QE R ++++ K+ + L
Sbjct: 61 ESREEPIQKYLLIFGVLVSVFIQELFRFAYYRLLKKANEGLK 102
>gi|68158704|dbj|BAE02661.1| anterior pharynx defective 1b putative splice variant [Mus
musculus]
Length = 208
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 10/116 (8%)
Query: 74 SVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQI-ALAGGLGHGVAHAVFF 132
SV QE R+ ++K+ K+ + L + P + M++ A GLG G+ VF
Sbjct: 29 SVCIQELFRLAYYKLLKKASEGLKSI-----NPEEDIAPSMRLLAYVSGLGFGIMSGVFS 83
Query: 133 CLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNT 187
++ L+ + GP T + PQ FFL SA + L + +H F V+ F+G E N
Sbjct: 84 FVNTLSNSLGPGTVGIHGDSPQ--FFLNSAFMTLVVIMLHVFWGVVFFDG-CEKNK 136
>gi|219120596|ref|XP_002181033.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407749|gb|EEC47685.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 323
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 107/283 (37%), Gaps = 68/283 (24%)
Query: 2 TVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKS 61
V+ IG AL+A GP LSLF ++ +K L++ V ++ +L++ + S W F +
Sbjct: 3 EVSLTIGSALLAFGPFLSLFGLLVYQKAQLVIVVTTAAFFFLLAAVTASLAWTIFHAIGL 62
Query: 62 TTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPR---------LFLTD 112
P A L+ V FQ R F +Y +E + ++ + R + TD
Sbjct: 63 GG--PLAALV-PGVFFQFAFRCGFVALYHNVEQVIQNSMEKSDQRRRDVAHPEQGINSTD 119
Query: 113 ---------------------KMQIALAGG-------LGHGVAHAVFFCLSLLTPAFGPA 144
K+++ L +G G H + +L G +
Sbjct: 120 APNARIEQNITQESDQWTEATKLRLQLNDASCGVAAGVGFGGMHVIMLYGTLWASQVGDS 179
Query: 145 T--FYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNG------YAEGNTTDQYFVP-- 194
Y D CPQ+P +SA+ A F + F M+ F G + G + +V
Sbjct: 180 EGVLYQDACPQVPSLALSAVYAFLFSILDVFWMLFTFFGMRRRRMFHRGAQGEDEYVSVG 239
Query: 195 ------------------VVHLVAGMVTLVNFASGGCVVGIPL 219
V H A + T ++ + GC++ IPL
Sbjct: 240 AWFGNSRTGGNFALLLCLVTHSFAAVFTTADYFNHGCLISIPL 282
>gi|300793854|ref|NP_001178332.1| gamma-secretase subunit APH-1B [Bos taurus]
gi|296483247|tpg|DAA25362.1| TPA: anterior pharynx defective 1c homolog isoform 1 [Bos taurus]
Length = 216
Score = 44.7 bits (104), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A G A IA GP+L+L++ I +P I+ ++ WL+SL+ S IW L
Sbjct: 1 MTAAVFFGCAFIAFGPALALYIFTIVTEPLRIIFLIIGAFFWLVSLLFSSLIWFTTATLI 60
Query: 61 STTWWP-------FALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDK 113
P F +LI SV QE R ++K+ K+ + L P + L
Sbjct: 61 GNKDEPREKYLLIFGVLI--SVLIQEMFRFAYYKLLKKASEGLKTINPYEKAPSMRLLAY 118
Query: 114 MQIALAGGLGHGVAHAVFF 132
+ L L H VFF
Sbjct: 119 AFMTLVITLLHVFWGIVFF 137
>gi|426233178|ref|XP_004010594.1| PREDICTED: gamma-secretase subunit APH-1B isoform 2 [Ovis aries]
Length = 216
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A G A IA GP+L+L++ I +P I+ ++ WL+SL+ S IW L
Sbjct: 1 MTAAVFFGCAFIAFGPALALYIFTIVTEPLRIIFLIIGAFFWLVSLLFSSLIWFTTATLI 60
Query: 61 STTWWP-------FALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDK 113
P F +LI SV QE R ++K+ K+ + L P + L
Sbjct: 61 GNKDEPREKYLLIFGVLI--SVLIQEMFRFAYYKLLKKASEGLKIINPYEKAPSMRLLAY 118
Query: 114 MQIALAGGLGHGVAHAVFF 132
+ L L H VFF
Sbjct: 119 AFMTLVITLLHVFWGIVFF 137
>gi|148529819|gb|ABQ82142.1| APH1B, partial [Equus caballus]
Length = 203
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 71 IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAV 130
++ SV QE R ++K+ K+ + L + L+ ++ +A GLG G+ V
Sbjct: 22 VLVSVFIQEVFRFGYYKILKKASEGLK----NISADETALSMRL-LAYVSGLGFGIMSGV 76
Query: 131 FFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFSMVIAFNG 181
F ++ L+ + GP T + PQ FFL+SA + L + +H F ++ F+G
Sbjct: 77 FSFVNTLSDSLGPGTVGIHGDSPQ--FFLVSAFMTLVIIMLHLFWGIVFFDG 126
>gi|308485734|ref|XP_003105065.1| CRE-APH-1 protein [Caenorhabditis remanei]
gi|308257010|gb|EFP00963.1| CRE-APH-1 protein [Caenorhabditis remanei]
Length = 314
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 13 ALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFLPLKSTTWWPFAL 69
+ PS++LF + I+ P I+ WL+SL++ S W +FLP F +
Sbjct: 13 SFSPSIALFYSFIAHDPVRIILFFLGAFFWLVSLLISSLAWFGLSSFLPNTFLISLTFCI 72
Query: 70 LIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRL------FLTDKMQIALAGGLG 123
++ QE RV ++ + K+ + L+ R G+ + + +AL GLG
Sbjct: 73 IV------QEFARVAYFALLKKAQKGLNKIT-RQGQISVAPGVSDLHNARHMLALVCGLG 125
Query: 124 HGVAHAVFFCLSLLTPAFGPAT 145
GV A+F+ ++ GP T
Sbjct: 126 MGVISALFYTMNAFAVFSGPGT 147
>gi|281211533|gb|EFA85695.1| gamma-secretase subunit Aph-1 [Polysphondylium pallidum PN500]
Length = 148
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 41/85 (48%)
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSM 175
+A+A G G G+ + ++L A GP + CP + F++SAI AL F +H
Sbjct: 34 MAIAIGTGSGITYGFVMYGTILWEAQGPGNLFSPACPTVSLFILSAIYALCFSLLHIAWN 93
Query: 176 VIAFNGYAEGNTTDQYFVPVVHLVA 200
+ AF GY N + V + H A
Sbjct: 94 ITAFQGYRTKNYFNVGVVLLSHFAA 118
>gi|338717431|ref|XP_001918159.2| PREDICTED: gamma-secretase subunit APH-1B [Equus caballus]
Length = 259
Score = 43.5 bits (101), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 57/112 (50%), Gaps = 8/112 (7%)
Query: 71 IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAV 130
++ SV QE R ++K+ K+ + L + L+ ++ +A GLG G+ V
Sbjct: 78 VLVSVFIQEVFRFGYYKILKKASEGLK----NISADETALSMRL-LAYVSGLGFGIMSGV 132
Query: 131 FFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFSMVIAFNG 181
F ++ L+ + GP T + PQ FFL+SA + L + +H F ++ F+G
Sbjct: 133 FSFVNTLSDSLGPGTVGIHGDSPQ--FFLVSAFMTLVIIMLHLFWGIVFFDG 182
>gi|392342916|ref|XP_003754734.1| PREDICTED: gamma-secretase subunit APH-1B-like [Rattus
norvegicus]
Length = 95
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 50/95 (52%), Gaps = 5/95 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIW---RAFL 57
MT A G A IA GP+LSL+V I+ P ++ +++ WL+SL++ S W R
Sbjct: 1 MTAAVFFGCAFIAFGPALSLYVFTIATDPLRVIFLIAGAFFWLVSLLLSSVFWFLVRVIT 60
Query: 58 PLKSTTWWPFALL--IISSVGFQEGLRVLFWKVYK 90
+ + L+ ++ SV QE R+ ++++ K
Sbjct: 61 DNRDGPVQNYLLIFGVLLSVCIQELFRLAYYRLLK 95
>gi|384493759|gb|EIE84250.1| hypothetical protein RO3G_08960 [Rhizopus delemar RA 99-880]
Length = 185
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
G G+ + +A +SLL + GP CPQ + I AI F +H M+IA
Sbjct: 56 GYGYALTNASVGYISLLVESIGPGVMMCPSCPQASLYFIYAITTTLFSLLHIGWMMIACE 115
Query: 181 GYAEGNTTDQY----FVPVVHLVAGMVTLVNFASG---GCVVGI 217
GY+E Y +V + H A T +N ++ GC+ I
Sbjct: 116 GYSELPQKKGYLKIIWVILSHYGASFATTLNSSTSVNYGCIASI 159
>gi|345316876|ref|XP_001514807.2| PREDICTED: gamma-secretase subunit Aph-1b-like [Ornithorhynchus
anatinus]
Length = 222
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 7/138 (5%)
Query: 71 IISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAV 130
++ SV QE R ++++ K+ L + P Q++ GLG G+ V
Sbjct: 40 VLFSVIIQEVFRFAYYRLLKKANKGLMTISQEETVP----ISVRQLSYVSGLGFGIMSGV 95
Query: 131 FFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNTTD 189
F +++L + GP + PQ +FL SA + LA V +H F ++ F+
Sbjct: 96 FSLVNILADSLGPGIVGIHGDSPQ--YFLSSAFMTLAIVLLHIFWGIVFFDACENKKWWA 153
Query: 190 QYFVPVVHLVAGMVTLVN 207
V + HL+ +T +N
Sbjct: 154 LALVILSHLLVSGLTFLN 171
>gi|268571837|ref|XP_002648820.1| C. briggsae CBR-APH-1 protein [Caenorhabditis briggsae]
Length = 315
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 14/141 (9%)
Query: 13 ALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPFALLII 72
+ PS++LF + I+ P I+ + WL+SL++ S W L +T P LI
Sbjct: 13 SFSPSIALFYSFIAHDPVRIILFFLGSFFWLVSLLISSLAW-----LGLSTVLPNTFLIS 67
Query: 73 SSVGF--QEGLRVLFWKVYKRLEDTLDAFADRVGKPRL------FLTDKMQIALAGGLGH 124
V QE RV ++ + K+ + L+ R G+ + + +AL GLG
Sbjct: 68 LGVCIVAQELSRVAYFMLLKKAQKGLNKIT-RHGQISVAPGVSDLHNARHMLALVCGLGM 126
Query: 125 GVAHAVFFCLSLLTPAFGPAT 145
GV A+F+ ++ GP T
Sbjct: 127 GVISALFYTMNAFATFAGPGT 147
>gi|397584814|gb|EJK53088.1| hypothetical protein THAOC_27540 [Thalassiosira oceanica]
Length = 794
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 58/296 (19%), Positives = 99/296 (33%), Gaps = 82/296 (27%)
Query: 7 IGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWP 66
+G L+ P+ SL V+ +KP L++ + S +L+S ++ S IW +
Sbjct: 452 LGCILLGFSPTASLLFMVVLRKPQLVILAVCSAFAYLLSALLSSTIWLVTSSIAGAVGGG 511
Query: 67 FAL-------LIISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRLFL--------- 110
+ + V Q LR LF + Y R+E + ++ +
Sbjct: 512 STSGIGTAISIAVPGVACQMLLRCLFVRTYFRVETVIRGSVEKHERETREAAAASSGGGA 571
Query: 111 ----------TDKMQI-------ALAGGLGHGVAHAVFFCLSLLTPAFGPA--------- 144
TD +Q+ LA G G+ + H++ +LL G +
Sbjct: 572 GNSAADEHAETDALQLQLNDTSCGLASGCGYALLHSLLLYGTLLASESGESNSDGAYGGG 631
Query: 145 --------TFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGY-----------AEG 185
T Y C +P + A+I F + M++ F G + G
Sbjct: 632 GGSTGHGGTLYQASCGGVPSVVNGALICCMFGILDVIWMMMCFWGVRRRLTMVARRGSGG 691
Query: 186 NTTDQYFVPV---------------------VHLVAGMVTLVNFASGGCVVGIPLL 220
T Q + + HL A + N A GC + +PLL
Sbjct: 692 GTAAQVWTALALGRVDDGPAGGNAALVVAAATHLAASFALVPNGAEDGCRISLPLL 747
>gi|358341309|dbj|GAA49019.1| anterior pharynx defective 1 [Clonorchis sinensis]
Length = 293
Score = 40.4 bits (93), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 99/248 (39%), Gaps = 46/248 (18%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT+ G G ALI LGP +SLFV ++ P ++ + + WL+SL++ S W AF
Sbjct: 1 MTLLGGFGCALIGLGPCISLFVLTVACDPLKVIVLTAGGFFWLLSLLLTSLFWLAF---- 56
Query: 61 STTWWPFALLIISSVGFQEGLRVLFWKVYKRLEDTLDAFA--------------DRVGKP 106
S+ AL + +V QE LR F+K+ ++ L A G+P
Sbjct: 57 SSVLSNLALSLFVAVASQELLRFAFFKLIILADNGLRVIAISAQTPVAPVVATRPPTGQP 116
Query: 107 RLFLT---------------------------DKMQIALAGGLGHGVAHAVFFCLSLLTP 139
L+ D +A GLG G+ +F L +L
Sbjct: 117 TDGLSNTAALRDPSNQDGGVLPSKTLGNDGLLDHRIVAYVSGLGFGLMTCIFELLRILID 176
Query: 140 AFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFNGYAEGNTTDQYFVPVVHLV 199
A+GP + + F+L++A + +H F VI F + + V HL
Sbjct: 177 AWGPGIGF-EVWEAKTFYLVAAFQVMCTSLMHIFWSVILFAAFERRDYVLLVLVYATHLA 235
Query: 200 AGMVTLVN 207
++ +N
Sbjct: 236 VPYLSFLN 243
>gi|47214485|emb|CAG12490.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 40.4 bits (93), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 57/111 (51%), Gaps = 5/111 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
MT A G IA GP++SLFV I+++P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MTAAVFFGCTFIAFGPAISLFVFTIAREPLRVIFLIAGAFFWLVSLLLSSLVWFISVQIS 60
Query: 60 -KSTTWWPFALLI---ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKP 106
K + LLI + SV QE R ++K+ K+ + L + P
Sbjct: 61 DKDSAAQQKGLLIFGVVLSVVLQETFRFAYYKLLKKANEGLLTLSQEETMP 111
>gi|17509423|ref|NP_492469.1| Protein APH-1 [Caenorhabditis elegans]
gi|37076812|sp|O45876.1|APH1_CAEEL RecName: Full=Gamma-secretase subunit aph-1; AltName:
Full=Anterior-pharynx-defective protein 1; AltName:
Full=Presenilin enhancer protein 1
gi|3880371|emb|CAA16282.1| Protein APH-1 [Caenorhabditis elegans]
Length = 308
Score = 40.0 bits (92), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 63/139 (45%), Gaps = 10/139 (7%)
Query: 13 ALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLKSTTWWPFALLII 72
+ PS++LF + I+ P I+ + WL+SL+ S W L L + F L +
Sbjct: 13 SFSPSIALFCSFIAHDPVRIILFFLGSFFWLVSLLFSSLAW---LGLSTVLPDTFLLSLT 69
Query: 73 SSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRL------FLTDKMQIALAGGLGHGV 126
+ QE RV ++ + K+ + L+ R G+ + + +AL GLG GV
Sbjct: 70 VCIIAQELSRVAYFMLLKKAQRGLNKIT-RQGQISVAPGVSDLHNARHMLALVCGLGMGV 128
Query: 127 AHAVFFCLSLLTPAFGPAT 145
A+F+ ++ GP T
Sbjct: 129 ISALFYTMNAFAIFSGPGT 147
>gi|395502617|ref|XP_003755675.1| PREDICTED: gamma-secretase subunit Aph-1b isoform 2 [Sarcophilus
harrisii]
Length = 217
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPLK 60
MT A G IA GP+L+L+V I+ P I+ +++ WL+SL++ S IW + L
Sbjct: 1 MTAAVFFGCTCIAFGPALALYVFTIASDPLRIIFLIAGAFFWLVSLLLSSLIWFVAVTLS 60
Query: 61 STTWWPF--ALLI---ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKP 106
ST LLI + SV QE R ++++ K+ L + P
Sbjct: 61 STKDESVQKGLLIFGVLCSVLIQEVFRFAYYRLLKKANKGLMTISQEETSP 111
>gi|395502619|ref|XP_003755676.1| PREDICTED: gamma-secretase subunit Aph-1b isoform 3 [Sarcophilus
harrisii]
Length = 201
Score = 38.5 bits (88), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 115 QIALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFS 174
Q+A GLG G+ VF +++L+ + GP + P FFL SA + L V +H F
Sbjct: 59 QLAYVSGLGFGIMSGVFSLVNILSDSLGPGIVGIHGDPPQ-FFLASAFMTLVMVLLHVFW 117
Query: 175 MVIAFNGYAEGN 186
V+ F+ N
Sbjct: 118 GVVFFDACETKN 129
>gi|341880559|gb|EGT36494.1| hypothetical protein CAEBREN_22638 [Caenorhabditis brenneri]
Length = 325
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 13 ALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLP-LKSTTWWPFALLI 71
+ P+++LF + I+ P I+ + WL+S++ S W L T AL I
Sbjct: 13 SFSPAVALFYSFIAHDPVRIILFFLGSFFWLVSILFSSLAWMGLSSILPDTFLMSLALCI 72
Query: 72 ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRL------FLTDKMQIALAGGLGHG 125
+ QE RV ++ + K+ + L+ R G+ + + +AL GLG G
Sbjct: 73 FA----QEFSRVAYFMLLKKAQKGLNKIT-RQGQISVAPGVSDLHNARHMLALVCGLGMG 127
Query: 126 VAHAVFFCLSLLTPAFGPAT 145
V A+F+ ++ GP T
Sbjct: 128 VISALFYTMNAFAIFSGPGT 147
>gi|194385174|dbj|BAG60993.1| unnamed protein product [Homo sapiens]
Length = 114
Score = 38.1 bits (87), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 1 MTVAAGIGYALIALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLPL- 59
M A G +A GP+ +LF+ ++ P ++ +++ WL+SL++ S +W + +
Sbjct: 1 MGAAVFFGCTFVAFGPAFALFLITVAGDPLRVIILVAGAFFWLVSLLLASVVWFILVHVT 60
Query: 60 -KSTTWWPFALLIIS---SVGFQEGLRVLFWKV 88
+S + LLI SV QE R ++K+
Sbjct: 61 DRSDARLQYGLLIFGAAVSVLLQEVFRFAYYKL 93
>gi|341894341|gb|EGT50276.1| CBN-APH-1 protein [Caenorhabditis brenneri]
Length = 328
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 12/140 (8%)
Query: 13 ALGPSLSLFVAVISKKPFLILTVLSSTLLWLISLIVLSGIWRAFLP-LKSTTWWPFALLI 71
+ P+++LF + I+ P I+ + WL+S++ S W L T AL I
Sbjct: 13 SFSPAVALFYSFIAHDPVRIILFFLGSFFWLVSILFSSLAWMGLSSILPDTFLMSLALCI 72
Query: 72 ISSVGFQEGLRVLFWKVYKRLEDTLDAFADRVGKPRL------FLTDKMQIALAGGLGHG 125
+ QE RV ++ + K+ + L+ R G+ + + +AL GLG G
Sbjct: 73 FA----QEFSRVAYFMLLKKAQKGLNKIT-RQGQISVAPGVSDLHNARHMLALVCGLGMG 127
Query: 126 VAHAVFFCLSLLTPAFGPAT 145
V A+F+ ++ GP T
Sbjct: 128 VISALFYTMNAFAIFSGPGT 147
>gi|156379915|ref|XP_001631701.1| predicted protein [Nematostella vectensis]
gi|156218745|gb|EDO39638.1| predicted protein [Nematostella vectensis]
Length = 115
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 121 GLGHGVAHAVFFCLSLLTPAFGPATFYVDRCPQMPFFLISAIIALAFVTIHTFSMVIAFN 180
GLG+G+ +F +++L GP + + Q F ++SA + FV ++TF VI F+
Sbjct: 2 GLGYGLMSGLFAMVNVLADISGPGSIGLHGNAQ-NFLIVSAFLTSCFVLLNTFWGVIWFD 60
Query: 181 GYAEGNTTDQYFVPVVHL-VAGMVTLVNF 208
G+ + + V HL V+ MV+L F
Sbjct: 61 GWENKKWLNVFVVVASHLFVSLMVSLRGF 89
>gi|293349302|ref|XP_002727094.1| PREDICTED: gamma-secretase subunit APH-1B-like, partial [Rattus
norvegicus]
Length = 162
Score = 37.7 bits (86), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ A GP T + PQ FFL SA + L + +H F
Sbjct: 21 LAYVSGLGFGIMSGVFSFVNTLSNALGPGTVGIHGDSPQ--FFLNSAFMTLVIIMLHVFW 78
Query: 175 MVIAFNG 181
++ F+G
Sbjct: 79 GIVFFDG 85
>gi|149042019|gb|EDL95860.1| rCG58121, isoform CRA_b [Rattus norvegicus]
Length = 145
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 116 IALAGGLGHGVAHAVFFCLSLLTPAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFS 174
+A GLG G+ VF ++ L+ A GP T + PQ FFL SA + L + +H F
Sbjct: 4 LAYVSGLGFGIMSGVFSFVNTLSNALGPGTVGIHGDSPQ--FFLNSAFMTLVIIMLHVFW 61
Query: 175 MVIAFNGYAEGN 186
++ F+G E N
Sbjct: 62 GIVFFDG-CEKN 72
>gi|149028913|gb|EDL84254.1| rCG56634, isoform CRA_b [Rattus norvegicus]
Length = 145
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 79 EGLRVLFWKVYKRLEDTLDAFADRVGKPRLFLTDKMQIALAGGLGHGVAHAVFFCLSLLT 138
+ LRV+F + + + L + P + L +A GLG G+ VF ++ L+
Sbjct: 28 DPLRVIFL-IAGKASEGLKSINPEETAPSMRL-----LAYVSGLGFGIMSGVFSFVNTLS 81
Query: 139 PAFGPATFYVD-RCPQMPFFLISAIIALAFVTIHTFSMVIAFNG 181
A GP T + PQ FFL SA + L + +H F ++ F+G
Sbjct: 82 NALGPGTVGIHGDSPQ--FFLNSAFMTLVIIMLHVFWGIVFFDG 123
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.331 0.144 0.454
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,706,123,062
Number of Sequences: 23463169
Number of extensions: 148557454
Number of successful extensions: 525816
Number of sequences better than 100.0: 250
Number of HSP's better than 100.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 525290
Number of HSP's gapped (non-prelim): 284
length of query: 242
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 104
effective length of database: 9,121,278,045
effective search space: 948612916680
effective search space used: 948612916680
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 75 (33.5 bits)