Query 026165
Match_columns 242
No_of_seqs 25 out of 27
Neff 2.9
Searched_HMMs 13730
Date Mon Mar 25 07:06:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026165.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026165hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1yela1 b.142.1.2 (A:1-102) At 28.1 12 0.00091 26.0 1.8 48 41-96 39-86 (102)
2 d1v8ha1 b.1.18.19 (A:2-107) Su 22.8 23 0.0017 25.4 2.5 37 22-58 67-104 (106)
3 d1i6la_ c.26.1.1 (A:) Tryptoph 20.1 42 0.0031 27.0 3.9 52 35-96 30-81 (326)
4 d1wida_ b.142.1.2 (A:) DNA-bin 18.7 21 0.0015 24.9 1.4 51 39-94 44-94 (117)
5 d1ik9a1 b.59.1.1 (A:1-117) XRC 18.6 88 0.0064 23.2 5.1 66 28-96 19-90 (117)
6 d2guya1 b.71.1.1 (A:382-476) F 18.1 38 0.0028 24.2 2.8 25 106-130 68-92 (95)
7 d2aaaa1 b.71.1.1 (A:382-476) F 16.4 31 0.0023 24.6 1.9 25 106-130 68-92 (95)
8 d1xsza1 a.118.3.1 (A:1-197) Ra 15.5 21 0.0016 28.0 0.9 55 40-94 139-196 (197)
9 d1vlra1 d.13.1.3 (A:146-337) m 14.4 38 0.0028 26.9 2.2 45 26-72 117-163 (192)
10 d2a22a1 d.159.1.7 (A:4-196) Va 13.5 35 0.0026 25.3 1.6 15 36-50 1-15 (193)
No 1
>d1yela1 b.142.1.2 (A:1-102) At1g16640 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=28.07 E-value=12 Score=26.02 Aligned_cols=48 Identities=10% Similarity=0.350 Sum_probs=35.2
Q ss_pred EEEEeeccccchhhcccccchhhhHhhhcCCCChHHHHHHHHHhcccccceEeecC
Q 026165 41 LIQVTDFRSNTWEAKRSVLQLDDMRDEIGIGGSWSEFIDYVVASIKSEDVKLILEG 96 (242)
Q Consensus 41 ~v~vTDfHSntW~~slSv~~LeDlRD~VGIGGSWsdFldYl~aslsS~~VKL~L~~ 96 (242)
.|.+.|-+...|.-.++.. ++.+.++++|.+|+.. ..|+-||+ ++|+-
T Consensus 39 ~i~L~d~~G~~W~v~~~~~-----~~~~~~~~GW~~Fv~~--n~L~~GD~-~vF~~ 86 (102)
T d1yela1 39 TVDLLDYSGRSWTVRMKKR-----GEKVFLTVGWENFVKD--NNLEDGKY-LQFIY 86 (102)
T ss_dssp EEEEEETTSCEEEEEEEEE-----TTEEEECTTHHHHHHH--HTCCTTCE-EEEEE
T ss_pred EEEEEcCCCCEEEEEEEEe-----CCeEEEccCHHHHHHH--cCCCcCCE-EEEEE
Confidence 4566788899998776543 4567889999999864 67888884 45543
No 2
>d1v8ha1 b.1.18.19 (A:2-107) Sulfur oxidation protein SoxZ {Thermus thermophilus [TaxId: 274]}
Probab=22.85 E-value=23 Score=25.43 Aligned_cols=37 Identities=24% Similarity=0.293 Sum_probs=29.3
Q ss_pred CCCccce-EEEEeCCCCCCeEEEEeeccccchhhcccc
Q 026165 22 SDSLGRF-LFHVSAPDSSHLLIQVTDFRSNTWEAKRSV 58 (242)
Q Consensus 22 s~~l~Pf-LFh~~A~ds~hL~v~vTDfHSntW~~slSv 58 (242)
+.+--|+ -|++.+...+.|+|..+|-+-++|+++..+
T Consensus 67 svS~NP~~~F~~~~~~~g~l~v~~~Dn~G~~~~~~~~I 104 (106)
T d1v8ha1 67 STSANPLYAFKFKAEKAGTFTIKLKDTDGDTGEASVKL 104 (106)
T ss_dssp SCCSSCEEEEEEECCSCEEEEEEEEETTSCEEEEEEEE
T ss_pred cccCCCeEEEEEccCCCceEEEEEEECCCCEEEEEEEE
Confidence 3344554 478888888899999999999999988765
No 3
>d1i6la_ c.26.1.1 (A:) Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=20.06 E-value=42 Score=27.01 Aligned_cols=52 Identities=13% Similarity=0.157 Sum_probs=38.0
Q ss_pred CCCCCeEEEEeeccccchhhcccccchhhhHhhhcCCCChHHHHHHHHHhcccccceEeecC
Q 026165 35 PDSSHLLIQVTDFRSNTWEAKRSVLQLDDMRDEIGIGGSWSEFIDYVVASIKSEDVKLILEG 96 (242)
Q Consensus 35 ~ds~hL~v~vTDfHSntW~~slSv~~LeDlRD~VGIGGSWsdFldYl~aslsS~~VKL~L~~ 96 (242)
.+...+.|.++|.|+.|.. .+.+++|+-+ ..-..+|+..++--+++.+.+.-
T Consensus 30 q~~~~~~i~iAD~halt~~-----~~~~~l~~~~-----~~~~~~~lA~G~dp~k~~i~~qS 81 (326)
T d1i6la_ 30 QHEYNCYFCIVDQHAITVW-----QDPHELRQNI-----RRLAALYLAVGIDPTQATLFIQS 81 (326)
T ss_dssp TTTSEEEEEECHHHHTTSC-----CCHHHHHHHH-----HHHHHHHHHTTCCTTTSEEEEGG
T ss_pred hCCCCEEEEeehHHhhccC-----CCHHHHHHHH-----HHHHHHhhhhhccccceEEEeec
Confidence 3455689999999986543 3556777644 44558899999999999988863
No 4
>d1wida_ b.142.1.2 (A:) DNA-binding protein RAV1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=18.70 E-value=21 Score=24.86 Aligned_cols=51 Identities=18% Similarity=0.388 Sum_probs=37.5
Q ss_pred CeEEEEeeccccchhhcccccchhhhHhhhcCCCChHHHHHHHHHhcccccceEee
Q 026165 39 HLLIQVTDFRSNTWEAKRSVLQLDDMRDEIGIGGSWSEFIDYVVASIKSEDVKLIL 94 (242)
Q Consensus 39 hL~v~vTDfHSntW~~slSv~~LeDlRD~VGIGGSWsdFldYl~aslsS~~VKL~L 94 (242)
..-|++.|.|...|+-.+++-.-. ..-.++++|.+|+.- ..|+-||+=+..
T Consensus 44 ~~~~~~~d~~g~~W~~~~~~~~~~---~~~~l~~GW~~Fv~~--~~Lk~GD~~~F~ 94 (117)
T d1wida_ 44 GVLLNFEDVNGKVWRFRYSYWNSS---QSYVLTKGWSRFVKE--KNLRAGDVVSFS 94 (117)
T ss_dssp CEEEEEEETTTEEEEEEEEEETTT---TEEEEESSHHHHHHH--TTCCTTCEEEEE
T ss_pred cEEEEEEeCCCCEEEEEEEEECCC---CceEEecCHHHHHHH--cCCCCCCEEEEE
Confidence 467999999999998888774222 122466679999875 459999987554
No 5
>d1ik9a1 b.59.1.1 (A:1-117) XRCC4, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.57 E-value=88 Score=23.24 Aligned_cols=66 Identities=14% Similarity=0.255 Sum_probs=50.6
Q ss_pred eEEEEeCCC-CCCeEEEEeeccccchhhcccccchhhhHhhhcCCCChHHHHHHHHHhc-----ccccceEeecC
Q 026165 28 FLFHVSAPD-SSHLLIQVTDFRSNTWEAKRSVLQLDDMRDEIGIGGSWSEFIDYVVASI-----KSEDVKLILEG 96 (242)
Q Consensus 28 fLFh~~A~d-s~hL~v~vTDfHSntW~~slSv~~LeDlRD~VGIGGSWsdFldYl~asl-----sS~~VKL~L~~ 96 (242)
||+----.| .+...|..||-| ++|....|-+++--+-|+++- --..|++-++..| ..++-++.|..
T Consensus 19 FL~vsw~~dlgsGf~l~LtDG~-saW~G~Vse~dis~eA~~m~M--e~e~Yv~el~kAl~~~~~~~~~y~F~~s~ 90 (117)
T d1ik9a1 19 FLQVSWEKTLESGFVITLTDGH-SAWTGTVSESEISQEADDMAM--EKGKYVGELRKALLSGAGPADVYTFNFSK 90 (117)
T ss_dssp EEEEEESSCGGGEEEEEEECSS-CEEEEEEEHHHHHHHHHHTTC--CHHHHHHHHHHHHCC----CCCEEEEEET
T ss_pred EEEEEeeecCCCceEEEEeCCc-eeeeeEECHHHHHHHHHHhcC--cHHHHHHHHHHHHhcCCCCCcceEEEecc
Confidence 454444444 345889999999 679999999999999998765 4678999999888 45677777764
No 6
>d2guya1 b.71.1.1 (A:382-476) Fungal alpha-amylase {Aspergillus oryzae, Taka-amylase [TaxId: 5062]}
Probab=18.06 E-value=38 Score=24.19 Aligned_cols=25 Identities=24% Similarity=0.505 Sum_probs=20.1
Q ss_pred eeeeeeecCCCceeEEeecccccch
Q 026165 106 AKIVAQKSKGMPRISISLTRLTGSA 130 (242)
Q Consensus 106 akLVAqKaKGmPrItI~L~kl~~sa 130 (242)
+-|-..-.+|+|||=+|-.++.++.
T Consensus 68 G~l~v~m~~G~PrV~~P~s~l~gSG 92 (95)
T d2guya1 68 GNVPVPMAGGLPRVLYPTEKLAGSK 92 (95)
T ss_dssp SCEEEEECTTCCEEEEEGGGGTTSS
T ss_pred CEEEEEecCCeeEEEEeHHHCcCCc
Confidence 4466667799999999999998763
No 7
>d2aaaa1 b.71.1.1 (A:382-476) Fungal alpha-amylase {Aspergillus niger, acid amylase [TaxId: 5061]}
Probab=16.39 E-value=31 Score=24.58 Aligned_cols=25 Identities=20% Similarity=0.436 Sum_probs=19.9
Q ss_pred eeeeeeecCCCceeEEeecccccch
Q 026165 106 AKIVAQKSKGMPRISISLTRLTGSA 130 (242)
Q Consensus 106 akLVAqKaKGmPrItI~L~kl~~sa 130 (242)
+-|-....+|+|||=+|-.++.++.
T Consensus 68 G~l~V~m~~G~PrV~~P~s~l~gSG 92 (95)
T d2aaaa1 68 GDIPVPMASGLPRVLLPASVVDSSS 92 (95)
T ss_dssp SCEEEEECTTCCEEEEEHHHHTTSS
T ss_pred CEEEEEecCCEeEEEEeHHHccCCC
Confidence 4466667799999999998887753
No 8
>d1xsza1 a.118.3.1 (A:1-197) RalF, N-terminal domain {Legionella pneumophila [TaxId: 446]}
Probab=15.51 E-value=21 Score=27.99 Aligned_cols=55 Identities=20% Similarity=0.268 Sum_probs=36.8
Q ss_pred eEEEEeeccccch--hhcccccch-hhhHhhhcCCCChHHHHHHHHHhcccccceEee
Q 026165 40 LLIQVTDFRSNTW--EAKRSVLQL-DDMRDEIGIGGSWSEFIDYVVASIKSEDVKLIL 94 (242)
Q Consensus 40 L~v~vTDfHSntW--~~slSv~~L-eDlRD~VGIGGSWsdFldYl~aslsS~~VKL~L 94 (242)
+..+-||+|+-.= ...++.++- .++|..-+=..==.||++++.+++++...+|-|
T Consensus 139 iimLnTDlHnp~v~~k~kMt~~~Fi~n~r~~~~~~~~~~e~L~~iY~~I~~~~~~l~~ 196 (197)
T d1xsza1 139 TIMLNTDLHNPSIPEKNKMTVDGLKRNLRGGNNGGDFDAKFLEELYSEIKAKPFELNF 196 (197)
T ss_dssp HHHHHHHHHCTTSCGGGSCCHHHHHHHTTTTBTTBCCCHHHHHHHHHHHHHSCCCCCB
T ss_pred HHHHhccccCccccccCCCCHHHHHHHHhcccCCCCCCHHHHHHHHHHHhCCCeeeec
Confidence 4455699997643 456777654 555543321223468999999999999988754
No 9
>d1vlra1 d.13.1.3 (A:146-337) mRNA decapping enzyme DcpS C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=14.44 E-value=38 Score=26.87 Aligned_cols=45 Identities=16% Similarity=0.218 Sum_probs=26.0
Q ss_pred cceEEEEeCCCCCCeEEEEeec--cccchhhcccccchhhhHhhhcCCC
Q 026165 26 GRFLFHVSAPDSSHLLIQVTDF--RSNTWEAKRSVLQLDDMRDEIGIGG 72 (242)
Q Consensus 26 ~PfLFh~~A~ds~hL~v~vTDf--HSntW~~slSv~~LeDlRD~VGIGG 72 (242)
-++.||. +|+..|||+||.-. =+.. ...-----|||+=+-+-+|+
T Consensus 117 ~Rig~H~-~PSv~HLHlHvi~~~~~~~g-~~~~ra~lL~dvI~nLe~~~ 163 (192)
T d1vlra1 117 LRVYLHY-LPSYYHLHVHFTALGFEAPG-SGVERAHLLAQVIENLECDP 163 (192)
T ss_dssp EEEEEES-SCSSSSCEEEEEETTSCCTT-CBTTTEEEHHHHHHHHHHCT
T ss_pred eEEEEEC-CCCEeeeEEEEEeccCCCCc-cccceeeeHHHHHHHHhcCc
Confidence 3577886 56899999999743 3321 11111224666666555553
No 10
>d2a22a1 d.159.1.7 (A:4-196) Vacuolar protein sorting 29, VPS29 {Cryptosporidium parvum [TaxId: 5807]}
Probab=13.54 E-value=35 Score=25.27 Aligned_cols=15 Identities=20% Similarity=0.410 Sum_probs=13.1
Q ss_pred CCCCeEEEEeecccc
Q 026165 36 DSSHLLIQVTDFRSN 50 (242)
Q Consensus 36 ds~hL~v~vTDfHSn 50 (242)
|.+.|..+++|.|.+
T Consensus 1 ~~~~lIlviSD~H~~ 15 (193)
T d2a22a1 1 DFGDLVLLIGDLKIP 15 (193)
T ss_dssp CCCEEEEEECCCCTT
T ss_pred CCCcEEEEEeCCCCC
Confidence 568899999999975
Done!