BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026173
(242 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297743435|emb|CBI36302.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 312 bits (799), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 151/239 (63%), Positives = 187/239 (78%), Gaps = 5/239 (2%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCP+ G DRCVF+ +LGRFSFQP SEN LFGPS TL+KLG L + LVV +GE +
Sbjct: 53 MYVNNCPEKTGADRCVFNSYLGRFSFQPLSENPLFGPSPTTLEKLGALEKKLVVQEGEEW 112
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA IHL+ N L++LFIGVKLE++FGFLRIGLLYV+SGFGG LLS LH +S
Sbjct: 113 RLVSCIWLHAGAIHLIANMLSLLFIGVKLEQEFGFLRIGLLYVISGFGGSLLSALHLQKS 172
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLGA LSE+ NWT+Y NKC ++ L+ V+ +N+A+GF+P +D+
Sbjct: 173 -----ISVGASGALFGLLGAMLSELFMNWTIYANKCAALMTLMFVVVLNLAVGFLPHVDS 227
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
AHIGGF++G LLGFILL+RPQYGYVS YI PGY+ K K++ +Q LLWV ++V L
Sbjct: 228 SAHIGGFLSGFLLGFILLVRPQYGYVSRKYIPPGYDGKRVKSKHKWYQYLLWVAALVAL 286
>gi|317106731|dbj|BAJ53227.1| JHL06P13.7 [Jatropha curcas]
Length = 311
Score = 296 bits (757), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 141/242 (58%), Positives = 187/242 (77%), Gaps = 5/242 (2%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY N+CP G D+C+F+++LGR+SFQP EN++ GPS TL+ LG L V +GE +
Sbjct: 53 MYDNDCPTYTGTDKCLFYEYLGRYSFQPFKENAVLGPSVITLELLGALDPLRVERNGEAW 112
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
RFFSC+WLHA V+HLLTN +++LFIG+ LE++FGFLRIGLLYV+SGFGG L+S L + +
Sbjct: 113 RFFSCIWLHAGVLHLLTNMISLLFIGIPLEQEFGFLRIGLLYVMSGFGGSLMSALSPEPN 172
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG+ LSE+ NWT Y NKC ++T L+L+IG+N++ G +P +DN
Sbjct: 173 -----ISVGASGALFGLLGSMLSELFLNWTTYVNKCKAVTSLLLIIGLNLSFGLIPHVDN 227
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGGF++G LLGFILL+RPQYGYVS YI GY++ KKPK++C+Q LL++I+ V L
Sbjct: 228 SAHIGGFLSGFLLGFILLMRPQYGYVSRRYIPAGYDMIKKKPKHKCYQYLLFIIASVALI 287
Query: 241 VW 242
W
Sbjct: 288 FW 289
>gi|356557245|ref|XP_003546928.1| PREDICTED: rhomboid-related protein 3-like [Glycine max]
Length = 324
Score = 290 bits (743), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 139/249 (55%), Positives = 189/249 (75%), Gaps = 10/249 (4%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY N+CP L E+ C+F +LGRFSFQP EN L GP+ TL+ LG L + LVV E++
Sbjct: 52 MYENDCPAYLDEEVCLFSQYLGRFSFQPFRENPLLGPAIRTLRLLGALEKELVVDQNEVW 111
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
RFFSCM+LHA V+HLL N ++LFIGV+LE++FGFL+IGLLYVLSGFGG +LS LH ES
Sbjct: 112 RFFSCMFLHAGVVHLLANMFSLLFIGVRLEKEFGFLKIGLLYVLSGFGGSVLSVLHLKES 171
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNK--------CVSITMLILVIGVNMAI 172
+ +SVGASGALFGLLGA LSE++TNW++Y NK C ++T L++++G+N+A+
Sbjct: 172 EAN-TVSVGASGALFGLLGAMLSELLTNWSIYANKVLYPCLLQCAALTSLLIIVGLNLAV 230
Query: 173 GFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLW 232
GF+P +DN AH+GGF+AG LGF+LL+RPQYGYV+ YI PGY++ +K KY+ +Q
Sbjct: 231 GFLPHVDNSAHVGGFLAGYFLGFVLLMRPQYGYVNRKYIPPGYDVK-RKSKYKWYQYFFL 289
Query: 233 VISVVVLFV 241
++SV++L +
Sbjct: 290 IMSVIILLL 298
>gi|124359588|gb|ABD28718.2| Protein secE/sec61-gamma protein; Rhomboid-like protein [Medicago
truncatula]
Length = 324
Score = 284 bits (727), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/249 (55%), Positives = 188/249 (75%), Gaps = 9/249 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY+N+CP L ED C+++ +LG+FSFQP +EN L GPS TL+ LG L R+LVV + E++
Sbjct: 51 MYINDCPGYLNEDDCLWYQYLGKFSFQPFNENPLLGPSVRTLRVLGALERDLVVGENEVW 110
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
RF +CM+LHA VIHLL N ++LFIGV+LE +FGFL+IG+LY+LSGFGG LLS LH +
Sbjct: 111 RFITCMFLHAGVIHLLANMFSLLFIGVRLENEFGFLKIGVLYLLSGFGGSLLSILHMGDV 170
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNK--------CVSITMLILVIGVNMAI 172
+ +SVGASGALFGLLGA LSE++TNWT+Y NK ++T L+L+IG+N+A+
Sbjct: 171 KAPNTVSVGASGALFGLLGAMLSELLTNWTIYLNKGEKPLTVQFKALTSLLLIIGLNLAV 230
Query: 173 GFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLW 232
GF+P +DN AHIGGF++G LGF++L+RPQ+GYV+ YI PGY+ +K KY+ +Q
Sbjct: 231 GFIPHVDNSAHIGGFLSGFFLGFVILMRPQFGYVNNKYIPPGYD-AKRKSKYKGYQYFFL 289
Query: 233 VISVVVLFV 241
V+SV+ L +
Sbjct: 290 VLSVITLLI 298
>gi|297847644|ref|XP_002891703.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297337545|gb|EFH67962.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 309
Score = 283 bits (725), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 135/241 (56%), Positives = 179/241 (74%), Gaps = 6/241 (2%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVN+CP D C+ D LGR SFQP EN L GPS TL+KLG L R LV +GE +
Sbjct: 51 MYVNDCPAR--SDECLLFDVLGRLSFQPIKENMLLGPSIPTLRKLGALERRLV-EEGERW 107
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLH +HL+ N ++++ IG++LE++FGF+RIG LYV+SG GG L+SCL +
Sbjct: 108 RLISCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMRIGALYVISGLGGSLMSCLTDSQG 167
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
++ +SVGASGALFGLLGA LSE+ITNWT+Y NKC ++ L+L+I +N+++GF+P +DN
Sbjct: 168 ER---VSVGASGALFGLLGAMLSELITNWTIYENKCTALMTLVLIIVLNLSVGFLPRVDN 224
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AH GGF+AG LGF+LLLRPQYGYVS YI PGY++ HKK K++C+Q +L S+ VL
Sbjct: 225 SAHFGGFLAGFFLGFVLLLRPQYGYVSPKYIPPGYDMKHKKSKHKCYQHILMYTSLAVLL 284
Query: 241 V 241
V
Sbjct: 285 V 285
>gi|357455203|ref|XP_003597882.1| hypothetical protein MTR_2g103600 [Medicago truncatula]
gi|355486930|gb|AES68133.1| hypothetical protein MTR_2g103600 [Medicago truncatula]
Length = 345
Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 138/270 (51%), Positives = 189/270 (70%), Gaps = 30/270 (11%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY+N+CP L ED C+++ +LG+FSFQP +EN L GPS TL+ LG L R+LVV + E++
Sbjct: 51 MYINDCPGYLNEDDCLWYQYLGKFSFQPFNENPLLGPSVRTLRVLGALERDLVVGENEVW 110
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
RF +CM+LHA VIHLL N ++LFIGV+LE +FGFL+IG+LY+LSGFGG LLS LH +
Sbjct: 111 RFITCMFLHAGVIHLLANMFSLLFIGVRLENEFGFLKIGVLYLLSGFGGSLLSILHMGDV 170
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNK------------------------- 155
+ +SVGASGALFGLLGA LSE++TNWT+Y NK
Sbjct: 171 KAPNTVSVGASGALFGLLGAMLSELLTNWTIYLNKVLYNDIFCCLERKREKIHGVGVCAK 230
Query: 156 ----CVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYI 211
C ++T L+L+IG+N+A+GF+P +DN AHIGGF++G LGF++L+RPQ+GYV+ YI
Sbjct: 231 GQCSCAALTSLLLIIGLNLAVGFIPHVDNSAHIGGFLSGFFLGFVILMRPQFGYVNNKYI 290
Query: 212 APGYELNHKKPKYQCHQKLLWVISVVVLFV 241
PGY+ +K KY+ +Q V+SV+ L +
Sbjct: 291 PPGYD-AKRKSKYKGYQYFFLVLSVITLLI 319
>gi|15219034|ref|NP_175667.1| RHOMBOID-like protein 5 [Arabidopsis thaliana]
gi|5903047|gb|AAD55606.1|AC008016_16 F6D8.20 [Arabidopsis thaliana]
gi|332194705|gb|AEE32826.1| RHOMBOID-like protein 5 [Arabidopsis thaliana]
Length = 309
Score = 279 bits (713), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 132/241 (54%), Positives = 177/241 (73%), Gaps = 6/241 (2%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVN+CP D C+ D LGR SFQP EN L GPS TL+KLG L R LV +GE +
Sbjct: 51 MYVNDCPAR--SDECLLFDVLGRLSFQPIKENMLLGPSIPTLRKLGALERRLV-EEGERW 107
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLH +HL+ N ++++ IG++LE++FGF+RIG LYV+SG GG L+SCL +
Sbjct: 108 RLISCIWLHGGFLHLMANMISLMCIGMRLEQEFGFMRIGALYVISGLGGSLVSCLTDSQG 167
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
++ +SVGASGALFGLLGA LSE+ITNWT+Y NKC ++ LIL+I +N+++GF+P +DN
Sbjct: 168 ER---VSVGASGALFGLLGAMLSELITNWTIYENKCTALMTLILIIVLNLSVGFLPRVDN 224
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AH GGF+AG LGF+LLLRPQYGYV+ YI PGY++ HKK K++C+Q + S+ +L
Sbjct: 225 SAHFGGFLAGFFLGFVLLLRPQYGYVNPKYIPPGYDMKHKKSKHKCYQHIFRFTSLAILL 284
Query: 241 V 241
Sbjct: 285 A 285
>gi|225434919|ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 391
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/241 (55%), Positives = 181/241 (75%), Gaps = 8/241 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M++NNCPKN CV D LGRFSFQP EN L GPS++TL+K+G L + VV+ +++
Sbjct: 76 MFINNCPKN--SVSCV-ADFLGRFSFQPLKENPLLGPSSSTLEKMGALEVSKVVHRHQVW 132
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA V H+L N L+++FIG++LE++FGF+RIGLLYV+SGFGG +LS L S
Sbjct: 133 RLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIGLLYVVSGFGGSMLSSLFIQSS 192
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ITNWT+Y NK ++ LIL+I VN+A+G +P +DN
Sbjct: 193 -----ISVGASGALFGLLGGMLSELITNWTIYANKFAALLTLILIIIVNLAVGILPHVDN 247
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGGFV+G LLGF+ L+RPQ+G+VS +PG+ KPK++ +Q +LWV+S+++L
Sbjct: 248 FAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAPSVKPKHKMYQYVLWVMSLILLT 307
Query: 241 V 241
V
Sbjct: 308 V 308
>gi|147818034|emb|CAN64890.1| hypothetical protein VITISV_021082 [Vitis vinifera]
Length = 391
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/241 (55%), Positives = 181/241 (75%), Gaps = 8/241 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M++NNCPKN CV D LGRFSFQP EN L GPS++TL+K+G L + VV+ +++
Sbjct: 76 MFINNCPKN--SVSCV-ADFLGRFSFQPLKENPLLGPSSSTLEKMGALEVSKVVHRHQVW 132
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA V H+L N L+++FIG++LE++FGF+RIGLLYV+SGFGG +LS L S
Sbjct: 133 RLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIGLLYVVSGFGGSMLSSLFIQSS 192
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ITNWT+Y NK ++ LIL+I VN+A+G +P +DN
Sbjct: 193 -----ISVGASGALFGLLGGMLSELITNWTIYANKFAALLTLILIIIVNLAVGILPHVDN 247
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGGFV+G LLGF+ L+RPQ+G+VS +PG+ KPK++ +Q +LWV+S+++L
Sbjct: 248 FAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAXSVKPKHKMYQYVLWVMSLILLT 307
Query: 241 V 241
V
Sbjct: 308 V 308
>gi|297746062|emb|CBI16118.3| unnamed protein product [Vitis vinifera]
Length = 316
Score = 259 bits (662), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 134/241 (55%), Positives = 181/241 (75%), Gaps = 8/241 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M++NNCPKN CV D LGRFSFQP EN L GPS++TL+K+G L + VV+ +++
Sbjct: 1 MFINNCPKN--SVSCV-ADFLGRFSFQPLKENPLLGPSSSTLEKMGALEVSKVVHRHQVW 57
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA V H+L N L+++FIG++LE++FGF+RIGLLYV+SGFGG +LS L S
Sbjct: 58 RLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIGLLYVVSGFGGSMLSSLFIQSS 117
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ITNWT+Y NK ++ LIL+I VN+A+G +P +DN
Sbjct: 118 -----ISVGASGALFGLLGGMLSELITNWTIYANKFAALLTLILIIIVNLAVGILPHVDN 172
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGGFV+G LLGF+ L+RPQ+G+VS +PG+ KPK++ +Q +LWV+S+++L
Sbjct: 173 FAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAPSVKPKHKMYQYVLWVMSLILLT 232
Query: 241 V 241
V
Sbjct: 233 V 233
>gi|224104429|ref|XP_002313433.1| predicted protein [Populus trichocarpa]
gi|222849841|gb|EEE87388.1| predicted protein [Populus trichocarpa]
Length = 292
Score = 259 bits (661), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 129/241 (53%), Positives = 173/241 (71%), Gaps = 8/241 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVN+CP N G CV LGRFSFQP EN L GPS++TL+K+G L N VV+ + +
Sbjct: 23 MYVNDCPSNSGS--CV-APSLGRFSFQPLKENPLLGPSSSTLEKMGALDVNRVVHKHQSW 79
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA V H+L N L++LFIG++LE++FGFLR+GL+YV+SGFGG LLS L
Sbjct: 80 RLISCIWLHAGVFHVLANMLSLLFIGIRLEQEFGFLRVGLVYVISGFGGSLLSALFIQTG 139
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ITNWT+Y NK ++ L+ +I VN+A+G +P +DN
Sbjct: 140 -----ISVGASGALFGLLGGMLSELITNWTIYANKFAALLTLLCIIAVNLAVGLLPHVDN 194
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGGF++G LGF+ L+RPQ+ +++ PGY + K+Q +Q +LWVIS++VL
Sbjct: 195 FAHIGGFLSGFFLGFVFLIRPQFKWINQKTCPPGYIAPPAQSKHQTYQYVLWVISLIVLI 254
Query: 241 V 241
+
Sbjct: 255 I 255
>gi|255553147|ref|XP_002517616.1| KOM, putative [Ricinus communis]
gi|223543248|gb|EEF44780.1| KOM, putative [Ricinus communis]
Length = 303
Score = 259 bits (661), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 143/241 (59%), Positives = 186/241 (77%), Gaps = 6/241 (2%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVN+CP G D+C+ +D LGRFSFQP EN++ GPS TL++LG L +V +GE +
Sbjct: 54 MYVNDCPAKTGADKCLLYDLLGRFSFQPLQENAVLGPSVITLERLGALDPMAIVKNGEAW 113
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
RFFSC+WLHA V+HL TN +++LFIG++LEE+FGFLRIGLLYVLSGFGG L+S L + S
Sbjct: 114 RFFSCIWLHAGVVHLFTNMISLLFIGIRLEEEFGFLRIGLLYVLSGFGGSLMSSLRRKPS 173
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGAL GLLG+ LSE++ NWT+Y NKC +I+ L+L+I +N+A G +P +DN
Sbjct: 174 -----ISVGASGALLGLLGSMLSELLMNWTIYANKCSAISTLLLIIALNLAFGLIPHVDN 228
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGGF++G LLGFILL+RPQYGYVS YI GY + KK K++C+Q LL + ++VVL
Sbjct: 229 SAHIGGFLSGFLLGFILLMRPQYGYVSSRYIPVGYNIK-KKSKHKCYQYLLLITALVVLI 287
Query: 241 V 241
V
Sbjct: 288 V 288
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 259 bits (661), Expect = 1e-66, Method: Composition-based stats.
Identities = 121/242 (50%), Positives = 173/242 (71%), Gaps = 9/242 (3%)
Query: 1 MYVNNCPK-NLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MYVN+CP+ N G+ F LGRF+FQP EN L GPS+ATL K+G L VV+ +
Sbjct: 58 MYVNDCPRRNSGDCAAGF---LGRFAFQPLKENPLLGPSSATLLKMGALDVTKVVHGHQG 114
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R +C+WLHA V+HLL N L +LFIG++LE++FGF+RIGL+Y++SG GG L+S L
Sbjct: 115 WRLITCIWLHAGVVHLLINMLCLLFIGIRLEQEFGFVRIGLVYLISGLGGSLMSALFIRS 174
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S ISVGASGALFGL+G+ LSE+ITNW+LY NK ++ L+ VI VN+A+G +P +D
Sbjct: 175 S-----ISVGASGALFGLIGSMLSELITNWSLYANKVAALLTLVFVIVVNLALGILPRVD 229
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
N AHIGG ++G LLGF++ +RPQ+ +++ +APG + K K++ +Q +LW+ + ++L
Sbjct: 230 NFAHIGGLISGFLLGFVMFIRPQFAWINQRRVAPGQQPAPVKRKHKTYQYILWLAAAIML 289
Query: 240 FV 241
V
Sbjct: 290 IV 291
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 259 bits (661), Expect = 1e-66, Method: Composition-based stats.
Identities = 121/242 (50%), Positives = 173/242 (71%), Gaps = 9/242 (3%)
Query: 1 MYVNNCPK-NLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MYVN+CP+ N G+ F LGRF+FQP EN L GPS+ATL K+G L VV+ +
Sbjct: 58 MYVNDCPRRNSGDCAAGF---LGRFAFQPLKENPLLGPSSATLLKMGALDVTKVVHGHQG 114
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R +C+WLHA V+HLL N L +LFIG++LE++FGF+RIGL+Y++SG GG L+S L
Sbjct: 115 WRLITCIWLHAGVVHLLINMLCLLFIGIRLEQEFGFVRIGLVYLISGLGGSLMSALFIRS 174
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S ISVGASGALFGL+G+ LSE+ITNW+LY NK ++ L+ VI VN+A+G +P +D
Sbjct: 175 S-----ISVGASGALFGLIGSMLSELITNWSLYANKVAALLTLVFVIVVNLALGILPRVD 229
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
N AHIGG ++G LLGF++ +RPQ+ +++ +APG + K K++ +Q +LW+ + ++L
Sbjct: 230 NFAHIGGLISGFLLGFVMFIRPQFAWINQRRVAPGQQPAPVKRKHKTYQYILWLAAAIML 289
Query: 240 FV 241
V
Sbjct: 290 IV 291
>gi|42569431|ref|NP_180469.3| protein RHOMBOID-like 1 [Arabidopsis thaliana]
gi|110737035|dbj|BAF00472.1| hypothetical protein [Arabidopsis thaliana]
gi|330253108|gb|AEC08202.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
Length = 389
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/239 (52%), Positives = 172/239 (71%), Gaps = 8/239 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M++NNCPKN F LGRF+FQP EN L GPS+ TL+K+G L ++VV+ E++
Sbjct: 74 MFINNCPKNSAYCLARF---LGRFAFQPMKENPLLGPSSLTLEKMGALDVSMVVHKHEVW 130
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R F+C+WLHA V H+L N L+++FIG++LE++FGF+RIGLLY++SGFGG LLS L
Sbjct: 131 RLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGGSLLSSLFNRAG 190
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLGA LSE++TNWT+Y NK ++ LI +I +N+A+G +P +DN
Sbjct: 191 -----ISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTLIFIIAINLAVGILPHVDN 245
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
AH+GGF +G LLGF+ L+RPQYGY + GY K K++ +Q +LW+ S+V+L
Sbjct: 246 FAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSKHKPYQYVLWITSLVLL 304
>gi|147810722|emb|CAN71797.1| hypothetical protein VITISV_026278 [Vitis vinifera]
Length = 754
Score = 255 bits (651), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/236 (53%), Positives = 173/236 (73%), Gaps = 9/236 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCPKN C+ D LGRFSFQP EN L GPS++TL+K+G L + VV + +
Sbjct: 74 MYVNNCPKN--SISCI-ADFLGRFSFQPFKENPLLGPSSSTLQKMGALDVSRVVDRHQGW 130
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +C+WLH V HLL N L++L IG++LE++FGF+++GLLYV+SGFGG LLS L E+
Sbjct: 131 RLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISGFGGSLLSGLFIQEN 190
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ITNW++Y NK + L+++I +N+A+G +P +DN
Sbjct: 191 -----ISVGASGALFGLLGGMLSELITNWSIYANKLAAFLTLVIIIAINLAVGILPHVDN 245
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISV 236
AHIGGF++G LLGF+ L+RPQ+G+VS Y +P + + KPK++ +Q +LWV SV
Sbjct: 246 FAHIGGFLSGFLLGFVFLIRPQFGWVSQIYASPEHSTS-PKPKFKTYQCILWVASV 300
>gi|297822631|ref|XP_002879198.1| hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp.
lyrata]
gi|297325037|gb|EFH55457.1| hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/239 (51%), Positives = 171/239 (71%), Gaps = 8/239 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M++NNCPKN F LGRF+FQP EN L GPS+ TL+K+G L ++VV+ E++
Sbjct: 72 MFINNCPKNSAYCSARF---LGRFAFQPMKENPLLGPSSLTLEKMGALDVSMVVHKHEVW 128
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R F+C+WLHA V H+L N L+++FIG++LE++FGF+RIGLLY++SGFGG LLS L
Sbjct: 129 RLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGGSLLSSLFNRAG 188
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLGA LSE++TNWT+Y NK ++ LI +I +N+A+G +P +DN
Sbjct: 189 -----ISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTLIFIIAINLAVGILPHVDN 243
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
AH+GGF +G LLGF+ L+RPQYGY + Y K K++ +Q +LW+ S+++L
Sbjct: 244 FAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRSYAAPSAKSKHKPYQYVLWITSLLLL 302
>gi|225440378|ref|XP_002270642.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 388
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/236 (53%), Positives = 172/236 (72%), Gaps = 9/236 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCPKN C+ D LGRFSFQP EN L GPS++TL+K+G L + VV + +
Sbjct: 74 MYVNNCPKN--SISCI-ADFLGRFSFQPFKENPLLGPSSSTLQKMGALDVSRVVDRHQGW 130
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +C+WLH V HLL N L++L IG++LE++FGF+++GLLYV+SGFGG LLS L E+
Sbjct: 131 RLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISGFGGSLLSGLFIQEN 190
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ITNW++Y NK + L+++I +N+A+G +P +DN
Sbjct: 191 -----ISVGASGALFGLLGGMLSELITNWSIYANKLAAFLTLVIIIAINLAVGILPHVDN 245
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISV 236
AHIGGF++G LLGF+ L+RPQ+G+VS Y +P + KPK++ +Q +LWV SV
Sbjct: 246 FAHIGGFLSGFLLGFVFLIRPQFGWVSQIYASPEHS-TSPKPKFKTYQCILWVASV 300
>gi|297740363|emb|CBI30545.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 127/236 (53%), Positives = 172/236 (72%), Gaps = 9/236 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCPKN C+ D LGRFSFQP EN L GPS++TL+K+G L + VV + +
Sbjct: 6 MYVNNCPKN--SISCI-ADFLGRFSFQPFKENPLLGPSSSTLQKMGALDVSRVVDRHQGW 62
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +C+WLH V HLL N L++L IG++LE++FGF+++GLLYV+SGFGG LLS L E+
Sbjct: 63 RLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISGFGGSLLSGLFIQEN 122
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ITNW++Y NK + L+++I +N+A+G +P +DN
Sbjct: 123 -----ISVGASGALFGLLGGMLSELITNWSIYANKLAAFLTLVIIIAINLAVGILPHVDN 177
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISV 236
AHIGGF++G LLGF+ L+RPQ+G+VS Y +P + KPK++ +Q +LWV SV
Sbjct: 178 FAHIGGFLSGFLLGFVFLIRPQFGWVSQIYASPEHS-TSPKPKFKTYQCILWVASV 232
>gi|356504274|ref|XP_003520922.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 385
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/241 (52%), Positives = 171/241 (70%), Gaps = 8/241 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCP+N C+ LGRFSFQP EN L GPS+ TL+K+G L + VV+ + +
Sbjct: 70 MYVNNCPRN--SVSCI-ASFLGRFSFQPFKENPLLGPSSLTLQKMGALDVSRVVHRHQGW 126
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +CMWLHA V HLL N L IL IG++LE++FGF+ IGLL+V+SGFGG LLS L +
Sbjct: 127 RLITCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVLIGLLFVISGFGGSLLSALFIQSN 186
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ITNW++Y NK ++ L+++I +N+A+G +P +DN
Sbjct: 187 -----ISVGASGALFGLLGGMLSELITNWSIYDNKLTALLTLVIIIVINLAVGILPHVDN 241
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGGF+ G LLGF+ L+RPQ+G+V+ Y Y KPK++ +Q +LWV S+++L
Sbjct: 242 FAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPGRVKPKFKKYQCILWVFSLIILV 301
Query: 241 V 241
V
Sbjct: 302 V 302
>gi|255584755|ref|XP_002533096.1| KOM, putative [Ricinus communis]
gi|223527108|gb|EEF29288.1| KOM, putative [Ricinus communis]
Length = 408
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 129/241 (53%), Positives = 173/241 (71%), Gaps = 5/241 (2%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCP N + LGRFSFQP EN L GPS++TL+K+G L + VV + +
Sbjct: 88 MYVNNCPSNSMKPESCIAKFLGRFSFQPMKENPLLGPSSSTLEKMGALDVDKVVDGHQAW 147
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SCMWLHA V H+L N L+++FIG++LE++FGF+RIGL+YV+SGFGG LLS L +
Sbjct: 148 RLLSCMWLHAGVFHILANMLSLVFIGIRLEQEFGFIRIGLVYVISGFGGSLLSALFIQSN 207
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ITNWT+Y NK ++ L+L+I +N+A+G +P +DN
Sbjct: 208 -----ISVGASGALFGLLGGMLSELITNWTIYANKLAALLTLVLIIIINLAVGILPHVDN 262
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGGF +G LLGF+ L+RPQ+G+V+ PGY K K++ +Q +LWV+SV++L
Sbjct: 263 FAHIGGFFSGFLLGFVFLIRPQFGWVNQKACPPGYIAPPAKSKHKTYQYVLWVVSVILLI 322
Query: 241 V 241
V
Sbjct: 323 V 323
>gi|224134785|ref|XP_002321905.1| predicted protein [Populus trichocarpa]
gi|222868901|gb|EEF06032.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 251 bits (641), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 130/244 (53%), Positives = 178/244 (72%), Gaps = 12/244 (4%)
Query: 1 MYVNNCPKNLG---EDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDG 57
M +NNCPK+L E +CV LGRFSF+P +N LFGPS+ATL++LG L VV
Sbjct: 59 MCINNCPKHLHTRLEGKCVAR-FLGRFSFEPLKDNPLFGPSSATLERLGALEWTKVVDKH 117
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +R +C+WLHA +IHLL N L+++FIG++LE+ FGF+RIG++Y+LSGFGG +LS L
Sbjct: 118 QGWRLITCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVRIGVVYLLSGFGGSVLSSLFI 177
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ ISVGASGALFGLLGA LSE+ITNW++YTNK ++ L+++I +N+AIG +P
Sbjct: 178 RNN-----ISVGASGALFGLLGAMLSELITNWSIYTNKAAALLTLLVIIVINLAIGILPH 232
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
+DN AHIGGF++G LLGF+LL RPQYG++ + G + K KY+ HQ LW+ISV+
Sbjct: 233 VDNFAHIGGFLSGFLLGFVLLPRPQYGWLERRNVPSGVGV---KSKYRAHQYALWLISVI 289
Query: 238 VLFV 241
+L V
Sbjct: 290 LLIV 293
>gi|363807474|ref|NP_001242137.1| uncharacterized protein LOC100805186 [Glycine max]
gi|255644920|gb|ACU22960.1| unknown [Glycine max]
Length = 384
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 126/241 (52%), Positives = 171/241 (70%), Gaps = 8/241 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCP+N C+ LGRFSFQP EN L GPS+ TL+K+G L + VV+ + +
Sbjct: 69 MYVNNCPRN--SVSCI-ASFLGRFSFQPFKENPLLGPSSLTLQKMGALDVSRVVHKHQGW 125
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +CMWLHA V HLL N L IL IG++LE++FGF+ IGLL+ +SGFGG LLS L +
Sbjct: 126 RLVTCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVLIGLLFFISGFGGSLLSALFIQSN 185
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ITNW++Y NK ++ L+++I +N+A+G +P +DN
Sbjct: 186 -----ISVGASGALFGLLGGMLSELITNWSIYDNKLAALLTLVIIIVINLAVGILPHVDN 240
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGGF+ G LLGF+ L+RPQ+G+V+ Y Y KPK++ +Q +LWV+S+++L
Sbjct: 241 FAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPGRSKPKFKKYQCILWVLSLIILV 300
Query: 241 V 241
V
Sbjct: 301 V 301
>gi|224054696|ref|XP_002298351.1| predicted protein [Populus trichocarpa]
gi|222845609|gb|EEE83156.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 169/241 (70%), Gaps = 8/241 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVN+CP N G CV LGRFSFQP EN L GPS++TL K+G L VV + +
Sbjct: 59 MYVNDCPTNSGS--CV-APSLGRFSFQPLKENPLLGPSSSTLVKMGALDVARVVNKHQSW 115
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA V H++ N L++L IG++LE++FGF RIGL+YV+SGFGG LLS L
Sbjct: 116 RLISCIWLHAGVFHVVANMLSLLLIGIRLEQEFGFFRIGLVYVISGFGGSLLSALFIQTG 175
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ITNWT+Y NK ++T L+ +I +N+A+G +P +DN
Sbjct: 176 -----ISVGASGALFGLLGGMLSELITNWTIYANKSAALTTLLCIIAINLAVGLLPHVDN 230
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGGF++G LGF+ L+RPQ+ +++ PGY K K++ +Q +LWV+S++V+
Sbjct: 231 YAHIGGFLSGFFLGFVFLIRPQFKWINQKACPPGYIAPPAKSKHKAYQYVLWVVSLIVII 290
Query: 241 V 241
+
Sbjct: 291 I 291
>gi|449452364|ref|XP_004143929.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449495860|ref|XP_004159966.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 327
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 175/241 (72%), Gaps = 11/241 (4%)
Query: 1 MYVNNCP-KNLG-EDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGE 58
MYVNNCP NLG D+CV LGRFSFQP EN L GPS+ TL KLG L N VV++ +
Sbjct: 57 MYVNNCPDSNLGFGDKCV-ASFLGRFSFQPIRENPLLGPSSNTLVKLGALKWNKVVHEHQ 115
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
+R SC+WLHA +IHLL N L+++ IG++LE+ FGF+RIG++Y+++G GG ++S L
Sbjct: 116 GWRLLSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGMIYLVAGVGGSVMSSLFIQ 175
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
+ ISVGASGALFGLLGA LSE++TNWT+YTNK ++ LI+++ +N+A+G +P +
Sbjct: 176 NN-----ISVGASGALFGLLGAMLSELLTNWTIYTNKVAALFTLIVIVVINLAVGILPHV 230
Query: 179 DNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
DN AHIGGF+ G LLGF+LL+RPQ+ + ++ PG + PKY+ +Q +LW+ + ++
Sbjct: 231 DNFAHIGGFLTGFLLGFVLLVRPQFKWTERHHLPPGAR---RVPKYKTYQYILWLAAAIL 287
Query: 239 L 239
L
Sbjct: 288 L 288
>gi|357155676|ref|XP_003577199.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 383
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 122/242 (50%), Positives = 175/242 (72%), Gaps = 9/242 (3%)
Query: 1 MYVNNCPKN-LGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
M+VN+CP+ +G+ F LGRF+FQP EN L GPS+ATL K+G L + +V +
Sbjct: 67 MFVNDCPRRGVGDCSASF---LGRFAFQPLRENPLLGPSSATLLKMGALDVSKIVQGRQG 123
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R +C+WLHA V+HLL N L +LFIG++LE++FGF+RIGL+Y++SGFGG L+S L
Sbjct: 124 WRLITCIWLHAGVVHLLINVLCLLFIGIRLEQEFGFVRIGLVYLISGFGGSLMSALFIRS 183
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S ISVGASGALFGL+G+ LSE+ITNW+LY NK ++ L+ VI VN+A+G +P +D
Sbjct: 184 S-----ISVGASGALFGLIGSMLSELITNWSLYANKVAALLTLVFVIVVNLALGILPRVD 238
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
N AHIGG ++G LLGF++ +RPQ+ +++ +APG E K K++ +Q +LW+ +VV+L
Sbjct: 239 NFAHIGGLISGFLLGFVVFIRPQFAWINQKRVAPGQETAPVKRKHKTYQYILWLAAVVLL 298
Query: 240 FV 241
V
Sbjct: 299 IV 300
>gi|115480259|ref|NP_001063723.1| Os09g0525900 [Oryza sativa Japonica Group]
gi|52076044|dbj|BAD46497.1| putative membrane protein [Oryza sativa Japonica Group]
gi|52077312|dbj|BAD46353.1| putative membrane protein [Oryza sativa Japonica Group]
gi|113631956|dbj|BAF25637.1| Os09g0525900 [Oryza sativa Japonica Group]
gi|125564435|gb|EAZ09815.1| hypothetical protein OsI_32104 [Oryza sativa Indica Group]
gi|125606379|gb|EAZ45415.1| hypothetical protein OsJ_30065 [Oryza sativa Japonica Group]
gi|215700990|dbj|BAG92414.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765558|dbj|BAG87255.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 323
Score = 246 bits (629), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 128/243 (52%), Positives = 171/243 (70%), Gaps = 12/243 (4%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCPK+ L RFSFQP EN L GPS+ATL+K+G L N VV+ + +
Sbjct: 54 MYVNNCPKHGSALGGCVAGFLRRFSFQPLRENPLLGPSSATLQKMGALDWNKVVHQHQGW 113
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA +IHL+ N L++LFIG++LE+ FGF+RIG +Y+LSGFGG +LS L +
Sbjct: 114 RLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVRIGAIYLLSGFGGSVLSALFLRNN 173
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG+ LSE+I NWT+Y+NK +I L+ +I +N+AIG +P DN
Sbjct: 174 ----YISVGASGALFGLLGSMLSELIMNWTIYSNKAAAIITLLFIIAINLAIGILPHADN 229
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL--NHKKPKYQCHQKLLWVISVVV 238
AHIGGFV G LLGF+LL RPQ+G++ +EL ++ PKY+ +Q +LWV++ V+
Sbjct: 230 FAHIGGFVTGFLLGFVLLARPQFGWME------RHELPQTNQPPKYKAYQYVLWVVAFVL 283
Query: 239 LFV 241
L V
Sbjct: 284 LLV 286
>gi|356575933|ref|XP_003556090.1| PREDICTED: inactive rhomboid protein 1-like isoform 1 [Glycine max]
Length = 329
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/241 (51%), Positives = 176/241 (73%), Gaps = 11/241 (4%)
Query: 1 MYVNNCPKN--LGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGE 58
MY+NNCP+N + RCV LGRFSFQP EN L GPS++TL K+G L + VV +
Sbjct: 57 MYINNCPRNNLRFQGRCVAR-FLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVVNRHQ 115
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
+R F+C+WLHA VIHLL N L+++FIG++LE+ FGF++IG++Y++SGFGG +LS L
Sbjct: 116 GWRLFTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVLSSLFIR 175
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
+ ISVGASGALFGLLGA LSE+ITNWT+Y+NK +++ L+++I +N+ IG +P +
Sbjct: 176 D-----HISVGASGALFGLLGAMLSELITNWTIYSNKAMALITLLVIIVINLGIGILPHV 230
Query: 179 DNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
DN AHIGGF+ G LLGFILL RPQ+ ++ + G + K KY+ +Q +LW++S+++
Sbjct: 231 DNFAHIGGFLVGFLLGFILLPRPQFSWLEQRRLPAGVGM---KSKYKAYQYVLWIVSLIL 287
Query: 239 L 239
L
Sbjct: 288 L 288
>gi|224074883|ref|XP_002304474.1| predicted protein [Populus trichocarpa]
gi|222841906|gb|EEE79453.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 175/242 (72%), Gaps = 9/242 (3%)
Query: 1 MYVNNCPK-NLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MYVN+CPK +LG + LGRFSFQP EN LFGPS ATL+K+G L N VV+ +
Sbjct: 51 MYVNDCPKKSLGIEGSCVAKFLGRFSFQPLKENPLFGPSAATLEKMGALEWNKVVHGHQG 110
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R +CMWLHA V+H+L N L+++FIG++LE+ FGF+R+G++Y++SGFGG +LS L +
Sbjct: 111 WRLITCMWLHAGVVHVLANMLSLIFIGIRLEQQFGFVRVGIIYLVSGFGGSILSSLFIQQ 170
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+ ISVGASGALFGLLGA LSE++TNWT+Y+NK ++ L+++I +N+A+G +P +D
Sbjct: 171 N-----ISVGASGALFGLLGAMLSELLTNWTIYSNKIAALLTLVVIIAINLAVGILPHVD 225
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
N AHIGGF++G LLGF+ LLRPQ+G+ + + K K++ +Q +L + + V+L
Sbjct: 226 NFAHIGGFMSGFLLGFVFLLRPQFGWAENRHSPADARV---KSKHKAYQYVLMLAAAVLL 282
Query: 240 FV 241
V
Sbjct: 283 IV 284
>gi|145329975|ref|NP_001077973.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
gi|77999982|dbj|BAE46872.1| Rhomboid family protein AtRBL1 [Arabidopsis thaliana]
gi|330253109|gb|AEC08203.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
Length = 346
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 125/267 (46%), Positives = 172/267 (64%), Gaps = 36/267 (13%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M++NNCPKN F LGRF+FQP EN L GPS+ TL+K+G L ++VV+ E++
Sbjct: 74 MFINNCPKNSAYCLARF---LGRFAFQPMKENPLLGPSSLTLEKMGALDVSMVVHKHEVW 130
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R F+C+WLHA V H+L N L+++FIG++LE++FGF+RIGLLY++SGFGG LLS L
Sbjct: 131 RLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGGSLLSSLFNRAG 190
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM------------------- 161
ISVGASGALFGLLGA LSE++TNWT+Y NK ++
Sbjct: 191 -----ISVGASGALFGLLGAMLSELLTNWTIYANKVAKSSLVKQAALSMNDVSIMSLVFL 245
Query: 162 ---------LILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIA 212
LI +I +N+A+G +P +DN AH+GGF +G LLGF+ L+RPQYGY +
Sbjct: 246 HLQFAALLTLIFIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNP 305
Query: 213 PGYELNHKKPKYQCHQKLLWVISVVVL 239
GY K K++ +Q +LW+ S+V+L
Sbjct: 306 RGYAAPSAKSKHKPYQYVLWITSLVLL 332
>gi|148906261|gb|ABR16286.1| unknown [Picea sitchensis]
Length = 383
Score = 246 bits (628), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 121/229 (52%), Positives = 167/229 (72%), Gaps = 8/229 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M++N+CPK+LG D C LGRFSFQP EN LFGPS++TL+K+G L VV + + +
Sbjct: 66 MFINDCPKDLG-DSCTL-KFLGRFSFQPLKENPLFGPSSSTLEKMGALEWQKVVKEHQGW 123
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +C+WLHA VIHLL N L+++FIG++LE++FGF RIG +Y++S FGG +LS L
Sbjct: 124 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQEFGFARIGTVYLVSAFGGSVLSALFNQNG 183
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
+SVGASGALFGLLGA LSE+ITNWT+Y +K ++ L+ +I VN+A G +P +DN
Sbjct: 184 -----VSVGASGALFGLLGAMLSELITNWTIYASKFAALVTLVFIIVVNLAFGLLPHVDN 238
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNH-KKPKYQCHQ 228
AHIGGF++G LLGF+ L+RPQ+G+V+ I PGY++N K K+ +Q
Sbjct: 239 FAHIGGFISGFLLGFVFLMRPQFGWVNRKIIPPGYDVNSVVKSKHNAYQ 287
>gi|356557429|ref|XP_003547018.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 389
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 127/246 (51%), Positives = 172/246 (69%), Gaps = 18/246 (7%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY+N+CPK+ CV LGRFSFQP EN LFGPS++TL+K+G L V++ +++
Sbjct: 69 MYINDCPKHSFYGSCV-ASFLGRFSFQPLKENPLFGPSSSTLEKMGALEVGKVIHRHQVW 127
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R FSC+WLH V+HLL N L+++FIG++LE++FGF+RIG LYV+SGFGG LLS L E
Sbjct: 128 RLFSCIWLHGGVVHLLANMLSLVFIGIRLEQEFGFVRIGFLYVISGFGGSLLSALFIQEG 187
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE++ NWT+Y NK ++ LI+++ +N+A+G +P +DN
Sbjct: 188 -----ISVGASGALFGLLGGMLSELLINWTIYANKFAALLTLIVIVVINLAVGILPHVDN 242
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYI-------APGYELNHKKPKYQCHQKLLWV 233
AHIGGFV+G LLGFI L+RPQ+ +VS + AP + HK +Y LWV
Sbjct: 243 FAHIGGFVSGFLLGFIFLIRPQFKWVSSRHRNSHSSAAAPSVKYKHKPYQYA-----LWV 297
Query: 234 ISVVVL 239
IS ++L
Sbjct: 298 ISFILL 303
>gi|449440331|ref|XP_004137938.1| PREDICTED: uncharacterized protein LOC101206123 [Cucumis sativus]
Length = 397
Score = 245 bits (626), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 123/229 (53%), Positives = 164/229 (71%), Gaps = 11/229 (4%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M VNNCPKN C+ LGRFSFQ EN L GPS+ TL+++G L N VV+ +++
Sbjct: 82 MSVNNCPKN--SVSCI-ARFLGRFSFQSLKENPLLGPSSLTLRRMGALEVNKVVHGNQLW 138
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +C+WLHA V HLL N L++L IG++LE++FGF+RIGLLYV+SGFGG LLS L +
Sbjct: 139 RLITCIWLHAGVFHLLANMLSLLVIGIRLEQEFGFIRIGLLYVISGFGGSLLSSLFIQSN 198
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ITNWT+Y+NK ++ L+++I +N+A+G +P +DN
Sbjct: 199 -----ISVGASGALFGLLGGMLSELITNWTIYSNKVAALVTLLVIIAINLAVGILPHVDN 253
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIA---PGYELNHKKPKYQC 226
AHIGGF++G LLGF+ L+RPQ+G+VS Y + + NHK YQC
Sbjct: 254 FAHIGGFISGFLLGFVFLIRPQFGWVSQRYTSQTNSSFGANHKFKIYQC 302
>gi|30693911|ref|NP_850698.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
gi|332645622|gb|AEE79143.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
Length = 394
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 166/239 (69%), Gaps = 13/239 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCPK G+ F D LGRFSFQ EN L GPS+ TL+ +GGL VV E +
Sbjct: 84 MYVNNCPKKSGD---CFADFLGRFSFQNTRENPLLGPSSLTLQTMGGLDVKKVVKGDEGW 140
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC WLH V+HLL N L +LFIG+++E +FGF+RIGLLY++SGFGG +LS L +
Sbjct: 141 RLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGLLYLISGFGGSILSALFLRSN 200
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGA+FGLLG LSEI NWT+Y+NK V+I L+L++ VN+ +G +PG+DN
Sbjct: 201 -----ISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVLIVAVNLGLGVLPGVDN 255
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
AHIGGF G LLGF+LL+RP YG+++ PG K +++ +Q +LW IS+++L
Sbjct: 256 FAHIGGFATGFLLGFVLLIRPHYGWIN-QRNGPG----AKPHRFKIYQGILWTISLLIL 309
>gi|449483645|ref|XP_004156648.1| PREDICTED: uncharacterized protein LOC101224387 [Cucumis sativus]
Length = 471
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/229 (53%), Positives = 164/229 (71%), Gaps = 11/229 (4%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M VNNCPKN C+ LGRFSFQ EN L GPS+ TL+++G L N VV+ +++
Sbjct: 156 MSVNNCPKN--SVSCIAR-FLGRFSFQSLKENPLLGPSSLTLRRMGALEVNKVVHGNQLW 212
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +C+WLHA V HLL N L++L IG++LE++FGF+RIGLLYV+SGFGG LLS L +
Sbjct: 213 RLITCIWLHAGVFHLLANMLSLLVIGIRLEQEFGFIRIGLLYVISGFGGSLLSSLFIQSN 272
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ITNWT+Y+NK ++ L+++I +N+A+G +P +DN
Sbjct: 273 -----ISVGASGALFGLLGGMLSELITNWTIYSNKVAALVTLLVIIAINLAVGILPHVDN 327
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIA---PGYELNHKKPKYQC 226
AHIGGF++G LLGF+ L+RPQ+G+VS Y + + NHK YQC
Sbjct: 328 FAHIGGFISGFLLGFVFLIRPQFGWVSQRYTSQTNSSFGANHKFKIYQC 376
>gi|110430670|gb|ABG73460.1| membrane protein [Oryza brachyantha]
Length = 326
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 127/243 (52%), Positives = 170/243 (69%), Gaps = 12/243 (4%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCPK+ L RFSFQP EN L GPS+ TL+K+G L N VV+ + +
Sbjct: 57 MYVNNCPKHGSALGGCVAGFLRRFSFQPLRENPLLGPSSPTLQKMGALDWNKVVHQHQGW 116
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA +IHL+ N L++LFIG++LE+ FGF+RIG +Y+LSGFGG +LS L +
Sbjct: 117 RLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVRIGAIYLLSGFGGSVLSALFLRNN 176
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG+ LSE+I NWT+Y+NK +I L+ +I +N+AIG +P DN
Sbjct: 177 ----YISVGASGALFGLLGSMLSELIMNWTIYSNKAAAIITLLFIIAINLAIGILPHADN 232
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL--NHKKPKYQCHQKLLWVISVVV 238
AHIGGFV G LLGF+LL RPQ+G++ +EL ++ PKY+ +Q +LWV++ V+
Sbjct: 233 FAHIGGFVTGFLLGFVLLARPQFGWME------RHELPQTNQPPKYKAYQYVLWVVAFVL 286
Query: 239 LFV 241
L V
Sbjct: 287 LLV 289
>gi|115486807|ref|NP_001068547.1| Os11g0704800 [Oryza sativa Japonica Group]
gi|62733172|gb|AAX95289.1| Rhomboid family, putative [Oryza sativa Japonica Group]
gi|77552712|gb|ABA95509.1| rhomboid family protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113645769|dbj|BAF28910.1| Os11g0704800 [Oryza sativa Japonica Group]
Length = 374
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/242 (50%), Positives = 173/242 (71%), Gaps = 9/242 (3%)
Query: 1 MYVNNCPK-NLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MYVN+CP+ N G+ F LGRF+FQP EN L GPS+ATL K+G L VV+ +
Sbjct: 58 MYVNDCPRRNSGDCAAGF---LGRFAFQPLKENPLLGPSSATLLKMGALDVTKVVHGHQG 114
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R +C+WLHA V+HLL N L +LFIG++LE++FGF+RIGL+Y++SG GG L+S L
Sbjct: 115 WRLITCIWLHAGVVHLLINMLCLLFIGIRLEQEFGFVRIGLVYLISGLGGSLMSALFIRS 174
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S ISVGASGALFGL+G+ LSE+ITNW+LY NK ++ L+ VI VN+A+G +P +D
Sbjct: 175 S-----ISVGASGALFGLIGSMLSELITNWSLYANKVAALLTLVFVIVVNLALGILPRVD 229
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
N AHIGG ++G LLGF++ +RPQ+ +++ +APG + K K++ +Q +LW+ + ++L
Sbjct: 230 NFAHIGGLISGFLLGFVMFIRPQFAWINQRRVAPGQQPAPVKRKHKTYQYILWLAAAIML 289
Query: 240 FV 241
V
Sbjct: 290 IV 291
>gi|359490352|ref|XP_003634078.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 324
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/241 (50%), Positives = 171/241 (70%), Gaps = 11/241 (4%)
Query: 1 MYVNNCPKNLG--EDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGE 58
MY+NNCPK + +CV LGRFSFQP EN LFGPS+ TL+KLG L VV +
Sbjct: 51 MYINNCPKENSRVQGKCV-AGFLGRFSFQPLKENPLFGPSSKTLEKLGALEWKKVVSKHQ 109
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
+R +C+WLHA +IHLL N L+++ IG++LE+ FGF+RIG++Y+LSGFGG +LS L
Sbjct: 110 GWRLVTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGFVRIGVIYLLSGFGGSVLSSLFIQ 169
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
S ISVGASGALFGLLGA LSE+ITNW++YTN+ ++ L++++ VN+ +G +P +
Sbjct: 170 NS-----ISVGASGALFGLLGAMLSELITNWSMYTNRAAALLTLLVIVAVNLTVGILPRV 224
Query: 179 DNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
+N AHIGGFV G LGFIL+ RPQ+G++ G + + K KY+ +Q + W++S+V+
Sbjct: 225 NNFAHIGGFVTGFFLGFILMPRPQFGWIEGRNLPADVRV---KSKYKAYQYVCWLVSLVL 281
Query: 239 L 239
L
Sbjct: 282 L 282
>gi|225455416|ref|XP_002279077.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Vitis vinifera]
gi|297741091|emb|CBI31822.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/241 (50%), Positives = 171/241 (70%), Gaps = 11/241 (4%)
Query: 1 MYVNNCPKNLG--EDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGE 58
MY+NNCPK + +CV LGRFSFQP EN LFGPS+ TL+KLG L VV +
Sbjct: 52 MYINNCPKENSRVQGKCV-AGFLGRFSFQPLKENPLFGPSSKTLEKLGALEWKKVVSKHQ 110
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
+R +C+WLHA +IHLL N L+++ IG++LE+ FGF+RIG++Y+LSGFGG +LS L
Sbjct: 111 GWRLVTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGFVRIGVIYLLSGFGGSVLSSLFIQ 170
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
S ISVGASGALFGLLGA LSE+ITNW++YTN+ ++ L++++ VN+ +G +P +
Sbjct: 171 NS-----ISVGASGALFGLLGAMLSELITNWSMYTNRAAALLTLLVIVAVNLTVGILPRV 225
Query: 179 DNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
+N AHIGGFV G LGFIL+ RPQ+G++ G + + K KY+ +Q + W++S+V+
Sbjct: 226 NNFAHIGGFVTGFFLGFILMPRPQFGWIEGRNLPADVRV---KSKYKAYQYVCWLVSLVL 282
Query: 239 L 239
L
Sbjct: 283 L 283
>gi|297837099|ref|XP_002886431.1| hypothetical protein ARALYDRAFT_893154 [Arabidopsis lyrata subsp.
lyrata]
gi|297332272|gb|EFH62690.1| hypothetical protein ARALYDRAFT_893154 [Arabidopsis lyrata subsp.
lyrata]
Length = 317
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/229 (52%), Positives = 164/229 (71%), Gaps = 11/229 (4%)
Query: 1 MYVNNCPKNL-GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
M+VN+CPK + G ++ LGRFSFQP EN LFGPS++TL+K+G L VV++ +
Sbjct: 51 MFVNDCPKKITGANKECVARFLGRFSFQPLKENPLFGPSSSTLEKMGALEWRKVVHEHQG 110
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R SCMWLHA +IHLLTN L+++FIG++LE+ FGF+R+GL+Y++SG GG +LS L E
Sbjct: 111 WRLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQE 170
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S ISVGASGALFGLLGA LSE++TNWT+Y NK ++ L+ +I +N+A+G +P +D
Sbjct: 171 S-----ISVGASGALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINLALGMLPRVD 225
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQ 228
N AHIGGF+ G LGF+LL+RPQYG+ A + K KY +Q
Sbjct: 226 NFAHIGGFLTGFCLGFVLLVRPQYGWE-----ASRTNTSRTKRKYSMYQ 269
>gi|15221690|ref|NP_176500.1| rhomboid -like 2 [Arabidopsis thaliana]
gi|12323258|gb|AAG51610.1|AC010795_14 membrane protein, putative; 61952-60281 [Arabidopsis thaliana]
gi|28393358|gb|AAO42103.1| putative membrane protein [Arabidopsis thaliana]
gi|28827620|gb|AAO50654.1| putative membrane protein [Arabidopsis thaliana]
gi|77999980|dbj|BAE46871.1| Rhomboid family protein AtRBL2 [Arabidopsis thaliana]
gi|332195937|gb|AEE34058.1| rhomboid -like 2 [Arabidopsis thaliana]
Length = 317
Score = 243 bits (621), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 120/229 (52%), Positives = 164/229 (71%), Gaps = 11/229 (4%)
Query: 1 MYVNNCPKNL-GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
M+VN+CPK + G ++ LGRFSFQP EN LFGPS++TL+K+G L VV++ +
Sbjct: 51 MFVNDCPKKITGPNKECVARFLGRFSFQPLKENPLFGPSSSTLEKMGALEWRKVVHEHQG 110
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R SCMWLHA +IHLLTN L+++FIG++LE+ FGF+R+GL+Y++SG GG +LS L E
Sbjct: 111 WRLLSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQE 170
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S ISVGASGALFGLLGA LSE++TNWT+Y NK ++ L+ +I +N+A+G +P +D
Sbjct: 171 S-----ISVGASGALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINLALGMLPRVD 225
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQ 228
N AHIGGF+ G LGF+LL+RPQYG+ A + K KY +Q
Sbjct: 226 NFAHIGGFLTGFCLGFVLLVRPQYGWE-----ASRTNTSRTKRKYSMYQ 269
>gi|224122384|ref|XP_002318821.1| predicted protein [Populus trichocarpa]
gi|222859494|gb|EEE97041.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 126/244 (51%), Positives = 172/244 (70%), Gaps = 12/244 (4%)
Query: 1 MYVNNCPKNLG---EDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDG 57
MY+NNCPK+L E +C LGRFSF+P +N LFGPS+ATL++ G L VV+
Sbjct: 28 MYINNCPKHLHTRFEGKCA-ARFLGRFSFEPLKDNPLFGPSSATLERFGALEWTKVVHKH 86
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +R SC+WLHA +IHLL N L+++FIG++LE+ FGF+RIG++Y+LSGFGG +LS L
Sbjct: 87 QGWRLISCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVRIGIVYLLSGFGGSVLSSLFI 146
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S ISVGASGALFGLLGA LSE+ITNW++YTNK ++ L+++ +N+AIG +P
Sbjct: 147 RNS-----ISVGASGALFGLLGAMLSELITNWSIYTNKTAALFTLLVITAINLAIGILPR 201
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
+DN AHIGGF++G LLGF+LL R QYG+ + G K K + +Q LW++SV
Sbjct: 202 VDNFAHIGGFLSGFLLGFVLLPRSQYGWQGRRNLPSGVGF---KSKLKAYQYALWLVSVA 258
Query: 238 VLFV 241
+L V
Sbjct: 259 LLIV 262
>gi|356547255|ref|XP_003542031.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 392
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 124/246 (50%), Positives = 169/246 (68%), Gaps = 18/246 (7%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY+N+CP + CV LGRFSFQP EN L GPS++TL+K+G L V++ +++
Sbjct: 72 MYINDCPNHSFYGSCV-ASFLGRFSFQPLKENPLLGPSSSTLEKMGALEVGKVIHGHQVW 130
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R FSC+WLH V+H+L N L+++FIG++LE++FGF+RIG LYV+SGFGG LLS L E
Sbjct: 131 RLFSCIWLHGGVVHVLANMLSLVFIGIRLEQEFGFVRIGFLYVISGFGGSLLSALFIQEG 190
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE++ NWT+Y NK ++ LI+++ +N+AIG +P +DN
Sbjct: 191 -----ISVGASGALFGLLGGMLSELLINWTIYANKFAALLTLIVIVVINLAIGVLPHVDN 245
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPY-------IAPGYELNHKKPKYQCHQKLLWV 233
AHIGGFV+G LGFI L+RPQ+ +VS + AP + HK +Y LWV
Sbjct: 246 FAHIGGFVSGFFLGFIFLIRPQFKWVSSRHRNSHSTAAAPSVKYKHKPYQYA-----LWV 300
Query: 234 ISVVVL 239
IS ++L
Sbjct: 301 ISFILL 306
>gi|449455106|ref|XP_004145294.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449473549|ref|XP_004153913.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449508492|ref|XP_004163327.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 383
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 120/228 (52%), Positives = 164/228 (71%), Gaps = 9/228 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVN+CPKN C+ LGRFSFQP EN L GPS++TL+K+G L + VVY + +
Sbjct: 69 MYVNDCPKN--SASCI-GRFLGRFSFQPLKENPLLGPSSSTLEKMGALEVDKVVYGHQAW 125
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA V H+L N L+++FIG++LE++FGF+RIG+LY++SGFGG L+S L
Sbjct: 126 RLISCLWLHAGVFHILANMLSLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSG 185
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE++TNWT+Y NK ++ L+ +I +N+A+G +P +DN
Sbjct: 186 -----ISVGASGALFGLLGGMLSELLTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDN 240
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQ 228
AHIGGF++G LLGF+ L+RPQ+G+VS AP + K KY+ +Q
Sbjct: 241 FAHIGGFISGFLLGFVFLVRPQFGWVS-QRNAPRGNSSTSKSKYKPYQ 287
>gi|326529191|dbj|BAK00989.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 326
Score = 239 bits (609), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 124/246 (50%), Positives = 171/246 (69%), Gaps = 15/246 (6%)
Query: 1 MYVNNCPKN---LGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDG 57
MY+N+CP++ LG D L +FSFQP EN L GPS+ATL+K+G L VV+
Sbjct: 54 MYLNDCPRHGSTLGGDAPCVAGFLRQFSFQPLRENPLLGPSSATLEKMGALDWAKVVHQH 113
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +R FSC+WLHA +IHL+ N +++LFIG++LE+ FGF+RIG++Y+LSGFGG +LS L
Sbjct: 114 QWWRLFSCVWLHAGLIHLIVNMMSLLFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSALFL 173
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
ISVGASGALFGLLG+ LSE+I NWT+Y+NK +IT L+ +I +N+AIG +P
Sbjct: 174 RNH----YISVGASGALFGLLGSMLSELIMNWTIYSNKAAAITTLLFIIAINLAIGILPH 229
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL--NHKKPKYQCHQKLLWVIS 235
DN AHIGGFV+G L GF+LL RPQ+G++ +EL + PKY+ +Q LW +
Sbjct: 230 ADNFAHIGGFVSGFLFGFVLLARPQFGWME------RHELPQTDQPPKYKMYQYALWGAA 283
Query: 236 VVVLFV 241
++ L V
Sbjct: 284 LLFLLV 289
>gi|217072548|gb|ACJ84634.1| unknown [Medicago truncatula]
gi|388512075|gb|AFK44099.1| unknown [Medicago truncatula]
Length = 326
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 120/226 (53%), Positives = 160/226 (70%), Gaps = 6/226 (2%)
Query: 1 MYVNNCP-KNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MY+NNCP KNLG D LGRFSFQP EN L GPS+ TL K+G L + VV +
Sbjct: 55 MYINNCPSKNLGFDGACVLKFLGRFSFQPLKENPLLGPSSETLTKMGALKWDAVVNHHQG 114
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R SC+WLHA +IHL N ++++FIG++LE+ FGF+RIG++Y++SGFGG +LS L +
Sbjct: 115 WRLVSCIWLHAGIIHLAANMISLVFIGIRLEQQFGFVRIGIVYLVSGFGGSILSALFIRK 174
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S ISVGASGALFGLLGA LSE+ITNW++YTNK ++ L+ +I +N+ IG +P +D
Sbjct: 175 S-----ISVGASGALFGLLGAMLSELITNWSIYTNKVAALMTLLFIIVINLVIGMLPHVD 229
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQ 225
N AHIGGF+ G LLGFI L RPQ+G+++ ++ G L K YQ
Sbjct: 230 NFAHIGGFLTGFLLGFIFLPRPQFGWLAQRHVPAGVRLKSKYKVYQ 275
>gi|326504866|dbj|BAK06724.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 418
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 124/261 (47%), Positives = 172/261 (65%), Gaps = 27/261 (10%)
Query: 1 MYVNNCPKN-------LGED---------------RCVFHDHLGRFSFQPRSENSLFGPS 38
MYVN+CP + +G+ C+ LGR++FQP EN L GP+
Sbjct: 77 MYVNDCPAHAAAAAAAIGDSVGGAAGGSAGAAASRGCMLEPDLGRYAFQPYKENPLVGPT 136
Query: 39 TATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRI 98
+ATL ++G L V D E +R +C+WLHA VIH+L N L++L IG++LE++FGFLRI
Sbjct: 137 SATLLQMGALETGKVAKDHEWWRLITCIWLHAGVIHILANMLSLLMIGIRLEKEFGFLRI 196
Query: 99 GLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVS 158
G LYV+SG GG LLS L + ISVGASGALFGLLG+ LSE+ITNWT+Y NKC +
Sbjct: 197 GTLYVISGVGGSLLSALFMVSN-----ISVGASGALFGLLGSMLSELITNWTIYENKCAA 251
Query: 159 ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELN 218
+ L+++I +N+A+G +P +DN AHIGGFV+G LGF+LL+RPQ+GY++ G
Sbjct: 252 LLTLVMIIVINLAVGILPHVDNFAHIGGFVSGFFLGFVLLMRPQFGYINQKNSRLGVHSG 311
Query: 219 HKKPKYQCHQKLLWVISVVVL 239
K KY+ +Q +L VI++V+L
Sbjct: 312 TTKCKYKPYQIVLLVIALVIL 332
>gi|255539517|ref|XP_002510823.1| KOM, putative [Ricinus communis]
gi|223549938|gb|EEF51425.1| KOM, putative [Ricinus communis]
Length = 325
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 121/228 (53%), Positives = 161/228 (70%), Gaps = 9/228 (3%)
Query: 1 MYVNNCPKNLG---EDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDG 57
MY+NNCP + E +CV LGRFSF+P +N LFGPS+ATL K+G L VV+
Sbjct: 51 MYMNNCPDHFHPRFEGKCV-ARFLGRFSFEPLRDNPLFGPSSATLTKMGALQWEKVVHGH 109
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +R +C+WLHA +IHLL N L ++FIGV+LE+ FGF+RIG++Y++SGF G +LS L
Sbjct: 110 QGWRLVTCIWLHAGIIHLLANMLCLVFIGVRLEQQFGFVRIGIIYLVSGFAGSVLSSLFI 169
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S ISVGASGALFGLLGA LSE+ITNWTLYTNK ++ L+++I +N+AIG +P
Sbjct: 170 RNS-----ISVGASGALFGLLGAMLSELITNWTLYTNKAAALLTLLVIIAINLAIGILPH 224
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQ 225
+DN AHIGGF++G LLGFILL RPQ+G++ + + K YQ
Sbjct: 225 VDNFAHIGGFLSGFLLGFILLARPQFGWLESQNVPASVGVKSKYKGYQ 272
>gi|125532680|gb|EAY79245.1| hypothetical protein OsI_34361 [Oryza sativa Indica Group]
Length = 332
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/241 (49%), Positives = 167/241 (69%), Gaps = 7/241 (2%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCP + L RFSFQP SEN L GPS+ATL+K+G L + VV++ + +
Sbjct: 62 MYVNNCPSHASRGGACVAGFLRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGW 121
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +C+WLHA V+HLL N L+++ IG++LE+ FG++RIG++Y++SG GG +LS L S
Sbjct: 122 RLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGIIYLVSGIGGSVLSSLFIRNS 181
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLGA LSE+ TNWT+YTNK ++ L++VI +N+AIG +P +DN
Sbjct: 182 -----ISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTLLIVIAINLAIGILPHVDN 236
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGGF+ G LLGFI L+RP YG++ Y+ P + + KY +Q +L ++ V+
Sbjct: 237 FAHIGGFLTGFLLGFIFLMRPHYGWMQ-RYVLPS-SVKYTSKKYLAYQWILLAVASVLAV 294
Query: 241 V 241
+
Sbjct: 295 I 295
>gi|224053955|ref|XP_002298056.1| predicted protein [Populus trichocarpa]
gi|222845314|gb|EEE82861.1| predicted protein [Populus trichocarpa]
Length = 322
Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 125/242 (51%), Positives = 173/242 (71%), Gaps = 9/242 (3%)
Query: 1 MYVNNCPK-NLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MYVN+CPK NLG +R LGRFSFQP EN LFGPS+ATL+K+G L N +V +
Sbjct: 51 MYVNDCPKKNLGSERSCVAKFLGRFSFQPLKENPLFGPSSATLEKMGALEWNKIVRGDQG 110
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R +CMWLHA VIH+L N L+++FIG++LE+ FGF+R+GL+Y++SGFGG + S L
Sbjct: 111 WRLITCMWLHAGVIHVLANMLSLVFIGIRLEQQFGFVRVGLIYLVSGFGGSIFSSLFIQR 170
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+ ISVGASGALFGLLGA LSE++TNWT+Y+NK ++ L+++I +N+A+G +P +D
Sbjct: 171 N-----ISVGASGALFGLLGAMLSELLTNWTIYSNKIAALLTLMVIIAINLAVGILPHVD 225
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
N AHIGGF G LLGF+LLLRPQ+G+V + H K K++ +Q + + + V+L
Sbjct: 226 NFAHIGGFFTGFLLGFVLLLRPQFGWVESQHFRAD---AHVKSKHKAYQYMFLLAAAVLL 282
Query: 240 FV 241
V
Sbjct: 283 IV 284
>gi|302765296|ref|XP_002966069.1| hypothetical protein SELMODRAFT_84059 [Selaginella moellendorffii]
gi|300166883|gb|EFJ33489.1| hypothetical protein SELMODRAFT_84059 [Selaginella moellendorffii]
Length = 335
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 154/206 (74%), Gaps = 8/206 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCPKN R F L R SF+ +N L GPS+ TLKK+G L+ LVV + +
Sbjct: 27 MYVNNCPKNSFNCRLTF---LKRLSFESLRDNPLLGPSSETLKKMGALNSTLVVKKHQGW 83
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SCMWLHA V+HLL N + +L IG++LE +FGF++IGLLY+LSGFGG LLS L +
Sbjct: 84 RLISCMWLHAGVLHLLANMICLLLIGIRLEREFGFVKIGLLYLLSGFGGSLLSALFIQD- 142
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
+ISVGASGALFGLLGA +SE+ITNW++Y+NK ++ L+++IG+N+A+G +P +DN
Sbjct: 143 ----RISVGASGALFGLLGAMVSELITNWSIYSNKIAALITLVIIIGINLAVGILPHVDN 198
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYV 206
AHIGGFV+G LLGF+LL+RPQ G+V
Sbjct: 199 FAHIGGFVSGFLLGFVLLMRPQLGWV 224
>gi|302776526|ref|XP_002971421.1| hypothetical protein SELMODRAFT_172130 [Selaginella moellendorffii]
gi|300160553|gb|EFJ27170.1| hypothetical protein SELMODRAFT_172130 [Selaginella moellendorffii]
Length = 379
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 154/206 (74%), Gaps = 8/206 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCPKN R F L R SF+ +N L GPS+ TLKK+G L+ LVV + +
Sbjct: 63 MYVNNCPKNSFNCRLTF---LKRLSFESLRDNPLLGPSSETLKKMGALNSTLVVKRHQGW 119
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SCMWLHA V+HLL N + +L IG++LE +FGF++IGLLY+LSGFGG LLS L +
Sbjct: 120 RLISCMWLHAGVLHLLANMICLLLIGIRLEREFGFVKIGLLYLLSGFGGSLLSALFIQD- 178
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
+ISVGASGALFGLLGA +SE+ITNW++Y+NK ++ L+++IG+N+A+G +P +DN
Sbjct: 179 ----RISVGASGALFGLLGAMVSELITNWSIYSNKIAALITLVIIIGINLAVGILPHVDN 234
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYV 206
AHIGGFV+G LLGF+LL+RPQ G+V
Sbjct: 235 FAHIGGFVSGFLLGFVLLMRPQLGWV 260
>gi|449446051|ref|XP_004140785.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449485528|ref|XP_004157199.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 323
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 123/244 (50%), Positives = 166/244 (68%), Gaps = 16/244 (6%)
Query: 1 MYVNNCPKNLGE--DRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGE 58
MY+NNCPK+ E +CV L RFSFQP EN LFGPS TL+K+G L VV +
Sbjct: 53 MYINNCPKHNDEFEGKCV-ARFLERFSFQPLRENPLFGPSATTLEKMGALESTKVVNKHQ 111
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
+R +C+WLHA V HLL N L ++FIG +LE+ FGF+RIG++Y++SGFGG +LS L
Sbjct: 112 AWRLITCIWLHAGVFHLLANMLCLVFIGTRLEQQFGFVRIGVIYLVSGFGGSVLSSLLIQ 171
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
+ ISVGASG+LFGLLGA LSE+ TNWT+YTNK ++ L+++I +N IG +P +
Sbjct: 172 NN-----ISVGASGSLFGLLGAMLSELFTNWTIYTNKAAALATLLVIIFINFGIGLLPHV 226
Query: 179 DNMAHIGGFVAGILLGFILLLRPQYGYVSG---PYIAPGYELNHKKPKYQCHQKLLWVIS 235
+N AHIGGF+ G LLGF LL RP+YG++ P + G KY+ +Q +LW++S
Sbjct: 227 NNFAHIGGFLTGFLLGFALLPRPKYGWLEQRNLPGVGAGL-----SSKYKTYQYVLWIVS 281
Query: 236 VVVL 239
VV+L
Sbjct: 282 VVLL 285
>gi|115477653|ref|NP_001062422.1| Os08g0546700 [Oryza sativa Japonica Group]
gi|42408095|dbj|BAD09236.1| putative membrane protein [Oryza sativa Japonica Group]
gi|113624391|dbj|BAF24336.1| Os08g0546700 [Oryza sativa Japonica Group]
gi|215686417|dbj|BAG87702.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201559|gb|EEC83986.1| hypothetical protein OsI_30137 [Oryza sativa Indica Group]
gi|222640971|gb|EEE69103.1| hypothetical protein OsJ_28172 [Oryza sativa Japonica Group]
Length = 323
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 122/246 (49%), Positives = 173/246 (70%), Gaps = 16/246 (6%)
Query: 1 MYVNNCPKN---LGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDG 57
M+VN+CP++ L + CV L +F+FQP EN L GPS+ATL+K+G L VV+
Sbjct: 52 MFVNDCPRHGSPLRGESCV-AGFLHQFAFQPLRENPLLGPSSATLEKMGALDWAKVVHQH 110
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +R SC+WLHA +IHL+ N L++LFIG++LE+ FGF+RIG++Y+LSGFGG +LS L
Sbjct: 111 QAWRLISCIWLHAGLIHLIVNMLSLLFIGLRLEQQFGFVRIGIIYLLSGFGGSVLSVLFL 170
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ ISVGASGALFGLLG+ LSE+I NWT+Y+NK +I L+ +I +N+AIG +P
Sbjct: 171 RNN----YISVGASGALFGLLGSMLSELIMNWTIYSNKAAAIITLLFIIAINLAIGILPH 226
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL--NHKKPKYQCHQKLLWVIS 235
DN AHIGGFV G LLGF+LL RPQ+G++ +EL ++ KY+ +Q +LW ++
Sbjct: 227 ADNFAHIGGFVTGFLLGFVLLARPQFGWME------RHELPQTNQPRKYRAYQYVLWAVA 280
Query: 236 VVVLFV 241
+ +L V
Sbjct: 281 LFLLLV 286
>gi|357134029|ref|XP_003568622.1| PREDICTED: uncharacterized protein LOC100834911 [Brachypodium
distachyon]
Length = 417
Score = 233 bits (595), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 121/254 (47%), Positives = 167/254 (65%), Gaps = 20/254 (7%)
Query: 1 MYVNNCPKNLGEDR---------------CVFHDHLGRFSFQPRSENSLFGPSTATLKKL 45
MY N+CP + C+ LGRF+FQ EN L GPS+ATL K+
Sbjct: 83 MYENDCPAHAAAAGAAIGGSVGGAGAAQGCLLEPELGRFAFQSYRENPLVGPSSATLLKM 142
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
G L + V D E +R +C+WLHA VIH+L N L++L IG++LE++FGFLRIG LYV+S
Sbjct: 143 GALETSKVAKDHEGWRLITCIWLHAGVIHILANMLSLLMIGIRLEKEFGFLRIGTLYVIS 202
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G GG LLS L + ISVGASGALFGLLG+ LSE+ITNWT+Y NK ++ L+++
Sbjct: 203 GVGGSLLSALFMVSN-----ISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVMI 257
Query: 166 IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQ 225
I +N+A+G +P +DN AHIGGF++G LGF+LL+RPQ+GY++ G K KY+
Sbjct: 258 IAINLAVGILPHVDNFAHIGGFISGFFLGFVLLIRPQFGYINQKNSPLGLSTGPTKCKYK 317
Query: 226 CHQKLLWVISVVVL 239
+Q +L VI++++L
Sbjct: 318 TYQIILLVIALMIL 331
>gi|297820116|ref|XP_002877941.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297323779|gb|EFH54200.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 393
Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 126/239 (52%), Positives = 167/239 (69%), Gaps = 13/239 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCPK G+ F D LGRFSFQ EN L GPS+ TL+ +GGL VV E +
Sbjct: 83 MYVNNCPKKSGD---CFADFLGRFSFQNTRENPLLGPSSLTLQTMGGLDVKKVVKGDEGW 139
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC WLH V+HLL N L +LFIG+++E +FGF+RIGLLY++SGFGG +LS L +
Sbjct: 140 RLLSCNWLHGGVVHLLVNMLTLLFIGIRMEREFGFIRIGLLYLISGFGGSILSALFLRSN 199
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGA+FGLLG LSEI NWT+Y+NK V+I L++++ VN+ +G +PG+DN
Sbjct: 200 -----ISVGASGAVFGLLGGMLSEIFINWTIYSNKIVTIITLVIIVAVNLGLGVLPGVDN 254
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
AHIGGF G LLGF+LL+RP YG+++ APG K +++ +Q +LW IS+++L
Sbjct: 255 FAHIGGFSTGFLLGFVLLIRPHYGWIN-QRNAPGA----KPHRFKMYQGILWTISLLLL 308
>gi|414876345|tpg|DAA53476.1| TPA: hypothetical protein ZEAMMB73_598699 [Zea mays]
Length = 663
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 170/254 (66%), Gaps = 20/254 (7%)
Query: 1 MYVNNCPK-----------NLGEDR----CVFHDHLGRFSFQPRSENSLFGPSTATLKKL 45
MYVN+CP ++GE C LGRF+FQ EN L GPS+ATL ++
Sbjct: 80 MYVNDCPAHARATGAAIGGSVGESATAQGCWLAPELGRFAFQSFKENPLIGPSSATLLEM 139
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
G L + V D E +R +C+WLHA V+H+L N L++L IG++LE++FGF+RIG LYV+S
Sbjct: 140 GALETSKVTKDHEGWRLITCIWLHAGVVHILANMLSLLMIGIRLEKEFGFIRIGTLYVIS 199
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G GG LLS L ISVGASGALFGLLG+ LSE+ITNWT+Y NK ++ L+++
Sbjct: 200 GVGGSLLSSLFM-----VSNISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVMI 254
Query: 166 IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQ 225
I +N+A+G +P +DN AH+GGF++G LGF+LL+RPQ+GY++ G+ + K K++
Sbjct: 255 ILINLAVGILPHVDNFAHLGGFMSGFCLGFVLLMRPQFGYINQKNSPLGFPMGVTKRKFK 314
Query: 226 CHQKLLWVISVVVL 239
+Q +L VIS ++L
Sbjct: 315 TYQVILLVISTMIL 328
>gi|226494277|ref|NP_001151264.1| membrane protein [Zea mays]
gi|195645390|gb|ACG42163.1| membrane protein [Zea mays]
Length = 414
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 120/254 (47%), Positives = 171/254 (67%), Gaps = 20/254 (7%)
Query: 1 MYVNNCPK-----------NLGEDR----CVFHDHLGRFSFQPRSENSLFGPSTATLKKL 45
MYVN+CP ++GE C LGRF+FQ EN L GPS+ATL ++
Sbjct: 80 MYVNDCPAHARATGAAIGGSVGESATAQGCWLAPELGRFAFQSFKENPLIGPSSATLLEM 139
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
G L + V D E +R +C+WLHA V+H+L N L++L IG++LE++FGF+RIG LYV+S
Sbjct: 140 GALETSKVTKDHEGWRLITCIWLHAGVVHILANMLSLLMIGIRLEKEFGFIRIGTLYVIS 199
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G GG LLS L + ISVGASGALFGLLG+ LSE+ITNWT+Y NK ++ L+++
Sbjct: 200 GVGGSLLSSLFMVSN-----ISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVMI 254
Query: 166 IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQ 225
I +N+A+G +P +DN AH+GGF++G LGF+LL+RPQ+GY++ G+ + K K++
Sbjct: 255 ILINLAVGILPHVDNFAHLGGFMSGFCLGFVLLMRPQFGYINQKNSPLGFPMGVTKRKFK 314
Query: 226 CHQKLLWVISVVVL 239
+Q +L VIS ++L
Sbjct: 315 TYQVILLVISTMIL 328
>gi|356559853|ref|XP_003548211.1| PREDICTED: inactive rhomboid protein 1-like isoform 1 [Glycine max]
Length = 329
Score = 233 bits (593), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 131/243 (53%), Positives = 176/243 (72%), Gaps = 11/243 (4%)
Query: 1 MYVNNCP-KNLG-EDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGE 58
MY+N+CP KNLG E CV LGRFSFQP EN LFGPS++TL K+G L + VV +
Sbjct: 58 MYLNDCPRKNLGFEGECVAR-FLGRFSFQPLRENPLFGPSSSTLTKMGALRWDDVVNHHQ 116
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
+R +C+WLHA V+HL N L+++FIG++LE+ FGF+RIG++Y+LSGFGG +LS L
Sbjct: 117 AWRLVTCIWLHAGVVHLAANMLSLVFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSSLFIR 176
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
+ ISVGASGALFGLLGA LSE+ITNW++YTNK ++ L+ +I +N+AIG +P +
Sbjct: 177 NN-----ISVGASGALFGLLGAMLSELITNWSIYTNKAAALFTLLFIIVINLAIGMLPHV 231
Query: 179 DNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
DN AHIGGF+ G LLGFILLLRPQ+G++ G L K KY+ +Q +LW++S ++
Sbjct: 232 DNFAHIGGFLTGFLLGFILLLRPQFGWLEQRRPPAGVRL---KSKYKAYQYVLWIVSAIL 288
Query: 239 LFV 241
L V
Sbjct: 289 LIV 291
>gi|326514946|dbj|BAJ99834.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 232 bits (592), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 125/246 (50%), Positives = 172/246 (69%), Gaps = 17/246 (6%)
Query: 1 MYVNNCPKN---LGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDG 57
M+VN+CP++ LG CV L RFSFQP EN L GPS+ TL K+G L N VV+
Sbjct: 51 MWVNDCPRHGSALGGG-CV-AGFLRRFSFQPLRENPLLGPSSTTLGKMGALDWNKVVHQH 108
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +R SC+WLHA +IHL+ + L++LFIG++LE+ FGF+RIG +Y+LSGFGG ++S L
Sbjct: 109 QGWRLISCIWLHAGLIHLVVDMLSLLFIGIRLEQQFGFVRIGAIYLLSGFGGSVMSALFL 168
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ ISVGASGALFGLLG+ LSE++ NWT+Y+NK +I L+ +I +N+AIG +P
Sbjct: 169 RNN----YISVGASGALFGLLGSMLSELLMNWTIYSNKVAAIITLLFIIAINVAIGILPH 224
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNH--KKPKYQCHQKLLWVIS 235
DN AHIGGF+ G LLGF+LL RPQ+G++ EL H + PKY+ +Q +LWV++
Sbjct: 225 ADNFAHIGGFLTGFLLGFVLLARPQFGWLERS------ELPHTNQPPKYKPYQYVLWVVA 278
Query: 236 VVVLFV 241
V+L V
Sbjct: 279 FVLLLV 284
>gi|242056443|ref|XP_002457367.1| hypothetical protein SORBIDRAFT_03g006170 [Sorghum bicolor]
gi|241929342|gb|EES02487.1| hypothetical protein SORBIDRAFT_03g006170 [Sorghum bicolor]
Length = 338
Score = 232 bits (592), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 118/254 (46%), Positives = 171/254 (67%), Gaps = 20/254 (7%)
Query: 1 MYVNNCPK-----------NLGEDR----CVFHDHLGRFSFQPRSENSLFGPSTATLKKL 45
MYVN+CP ++GE C+ LGRF+FQ EN L GP++ATL ++
Sbjct: 87 MYVNDCPAHARATGAAIGGSVGESATAQGCLLAPELGRFAFQSFKENPLIGPTSATLLEM 146
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
G L + V D E +R +C+WLHA VIH+L N L++L IG++LE++FGF+RIG LYV+S
Sbjct: 147 GALETSKVTKDHEGWRLITCIWLHAGVIHILANMLSLLMIGIRLEKEFGFIRIGTLYVIS 206
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G GG LLS L + ISVGASGALFGLLG+ LSE+ITNWT+Y NK ++ L+++
Sbjct: 207 GVGGSLLSSLFMVSN-----ISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVMI 261
Query: 166 IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQ 225
I +N+A+G +P +DN AH+GGF++G LGF+LL+RPQ+GY++ G+ K K++
Sbjct: 262 IVINLAVGILPHVDNFAHLGGFMSGFCLGFVLLIRPQFGYINQKNSPLGFPAGVTKQKFK 321
Query: 226 CHQKLLWVISVVVL 239
+Q +L VI+ +++
Sbjct: 322 IYQIVLLVIATMMI 335
>gi|226504776|ref|NP_001142335.1| membrane protein [Zea mays]
gi|194708266|gb|ACF88217.1| unknown [Zea mays]
gi|224034285|gb|ACN36218.1| unknown [Zea mays]
gi|414886370|tpg|DAA62384.1| TPA: membrane protein [Zea mays]
Length = 324
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/230 (51%), Positives = 160/230 (69%), Gaps = 12/230 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY NNCPK+ + L RFSFQP EN L GPS++TL+K+G L N +V+ + +
Sbjct: 55 MYENNCPKHGSQLGDCVAGFLRRFSFQPLRENPLLGPSSSTLEKMGALDWNKIVHQNQGW 114
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA +IHL+ N L++LFIG++LE+ FGF+RIG +Y+LSGFGG +LS L S
Sbjct: 115 RLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVRIGAIYLLSGFGGSVLSALFLRNS 174
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG+ LSE++ NWT+Y+NK +I L+ +I +N+AIG +P +DN
Sbjct: 175 ----YISVGASGALFGLLGSMLSELLMNWTIYSNKAAAIITLLFIIALNLAIGILPHVDN 230
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNH--KKPKYQCHQ 228
AHIGGF G LLGF+LL RPQ+ ++ +EL H + PKY+ +Q
Sbjct: 231 FAHIGGFATGFLLGFVLLARPQFSWME------SHELPHTNQPPKYKAYQ 274
>gi|3461845|gb|AAC33231.1| hypothetical protein [Arabidopsis thaliana]
Length = 372
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 125/293 (42%), Positives = 172/293 (58%), Gaps = 62/293 (21%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTAT------------------- 41
M++NNCPKN F LGRF+FQP EN L GPS+ T
Sbjct: 74 MFINNCPKNSAYCLARF---LGRFAFQPMKENPLLGPSSLTWVTLKISTLFLKIPHLIEI 130
Query: 42 -------LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
L+K+G L ++VV+ E++R F+C+WLHA V H+L N L+++FIG++LE++FG
Sbjct: 131 RVSEFEILEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFG 190
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
F+RIGLLY++SGFGG LLS L ISVGASGALFGLLGA LSE++TNWT+Y N
Sbjct: 191 FVRIGLLYMISGFGGSLLSSLFNRAG-----ISVGASGALFGLLGAMLSELLTNWTIYAN 245
Query: 155 KCVSITM----------------------------LILVIGVNMAIGFMPGIDNMAHIGG 186
K ++ LI +I +N+A+G +P +DN AH+GG
Sbjct: 246 KVAKSSLVKQAALSMNDVSIMSLVFLHLQFAALLTLIFIIAINLAVGILPHVDNFAHLGG 305
Query: 187 FVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
F +G LLGF+ L+RPQYGY + GY K K++ +Q +LW+ S+V+L
Sbjct: 306 FTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSKHKPYQYVLWITSLVLL 358
>gi|7629998|emb|CAB88340.1| putative protein [Arabidopsis thaliana]
Length = 361
Score = 232 bits (591), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/239 (51%), Positives = 162/239 (67%), Gaps = 18/239 (7%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCPK G+ F D LGRFSFQ EN L GPS+ TL+ +GGL VV E +
Sbjct: 56 MYVNNCPKKSGD---CFADFLGRFSFQNTRENPLLGPSSLTLQTMGGLDVKKVVKGDEGW 112
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC WLH V+HLL N L +LFIG+++E LRIGLLY++SGFGG +LS L +
Sbjct: 113 RLLSCNWLHGGVVHLLMNMLTLLFIGIRME-----LRIGLLYLISGFGGSILSALFLRSN 167
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGA+FGLLG LSEI NWT+Y+NK V+I L+L++ VN+ +G +PG+DN
Sbjct: 168 -----ISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVLIVAVNLGLGVLPGVDN 222
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
AHIGGF G LLGF+LL+RP YG+++ PG K +++ +Q +LW IS+++L
Sbjct: 223 FAHIGGFATGFLLGFVLLIRPHYGWIN-QRNGPG----AKPHRFKIYQGILWTISLLIL 276
>gi|445067421|gb|AGE14563.1| rhomboid [Triticum aestivum]
Length = 323
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/214 (52%), Positives = 157/214 (73%), Gaps = 7/214 (3%)
Query: 1 MYVNNCPKNL-GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MY NNCP + G +CV L RF+FQP S+N L GPS+ATL+KLG L + VV++ +
Sbjct: 52 MYANNCPAHARGRRKCVGAGFLRRFAFQPLSQNPLLGPSSATLQKLGALVWDKVVHEHQG 111
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R +C+WLHA V+HLL N L+++ +G++LE+ FGF+R+G++Y++SG GG ++S L +
Sbjct: 112 WRLVTCIWLHAGVVHLLANMLSLVLVGLRLEQQFGFVRVGVIYLVSGVGGSVMSSLFIRD 171
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+ ISVGASGALFGLLGA LSE+ TNWT+YTNK ++ L+ VI VN+AIG +P +D
Sbjct: 172 N-----ISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTLLFVIAVNLAIGILPHVD 226
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAP 213
N AHIGGF+ G LLGF+LL+RP YG+ Y+ P
Sbjct: 227 NFAHIGGFLTGFLLGFVLLMRPHYGWAQ-RYVLP 259
>gi|194703068|gb|ACF85618.1| unknown [Zea mays]
gi|195643104|gb|ACG41020.1| membrane protein [Zea mays]
gi|219888419|gb|ACL54584.1| unknown [Zea mays]
gi|224031257|gb|ACN34704.1| unknown [Zea mays]
gi|414591379|tpg|DAA41950.1| TPA: membrane protein [Zea mays]
Length = 327
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 164/233 (70%), Gaps = 17/233 (7%)
Query: 1 MYVNNCPKN---LGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDG 57
MY NNCPKN LG D CV L RFSFQP EN L GPS++TL+K+G L N +V+
Sbjct: 57 MYENNCPKNRSQLGGD-CV-AGFLRRFSFQPLRENPLLGPSSSTLEKMGALDWNKIVHQN 114
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +R SC+WLHA +IHL+ N L++LFIG++LE+ FGF+RIG +Y+LSGFGG +LS L
Sbjct: 115 QGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVRIGAIYLLSGFGGSVLSALFL 174
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ ISVGASGALFGLLG+ LSE++ NWT+Y+NK +I L+ +I +N+AIG +P
Sbjct: 175 RNN----YISVGASGALFGLLGSMLSELLMNWTIYSNKAAAIITLLFIIALNLAIGILPH 230
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL--NHKKPKYQCHQ 228
DN AHIGGF G LLGF+LL RPQ+G++ +EL ++ PKY+ +Q
Sbjct: 231 ADNFAHIGGFATGFLLGFVLLARPQFGWME------HHELPQTNQPPKYKAYQ 277
>gi|414867422|tpg|DAA45979.1| TPA: membrane protein [Zea mays]
Length = 334
Score = 231 bits (588), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/247 (48%), Positives = 167/247 (67%), Gaps = 13/247 (5%)
Query: 1 MYVNNCPKNLGEDR------CVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVV 54
MYVNNCP + R CV L RFSFQP SEN L GPS+ATL+KLG L + VV
Sbjct: 58 MYVNNCPAHAASSRRGGAGSCVARGFLHRFSFQPLSENPLLGPSSATLQKLGALVWDKVV 117
Query: 55 YDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
+ + +R +C+WLHA V HLL N ++++ IG++LE+ FG++R+G++Y++SG GG +LS
Sbjct: 118 REHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGIIYLVSGVGGSVLSS 177
Query: 115 LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF 174
L + ISVGASGALFGLLGA LSE+ TNWT+Y NK ++ L++VI +N+AIG
Sbjct: 178 LFIRNN-----ISVGASGALFGLLGAMLSELFTNWTIYANKAAALVTLLVVIAINLAIGI 232
Query: 175 MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVI 234
+P +DN AHIGGF+ G LLGF+LL+RP YG++ Y P ++ + KY +Q L +
Sbjct: 233 LPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWMQ-RYALPS-DVKYTTKKYLAYQWALLAV 290
Query: 235 SVVVLFV 241
+ V+ +
Sbjct: 291 ASVLAVI 297
>gi|356566513|ref|XP_003551475.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 385
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 116/241 (48%), Positives = 163/241 (67%), Gaps = 8/241 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVN+C K L F LGRFSFQP +EN L GPS TL+K+G L N VV+ + +
Sbjct: 69 MYVNDCSKTLATCIAPF---LGRFSFQPFNENPLLGPSLITLRKMGALDANKVVHRHQGW 125
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +CMWLH V HL+ N +L +G++LE++FGF+ IGLL+V+SGFGG LLS L E
Sbjct: 126 RLITCMWLHGGVFHLVANMFGLLVVGIQLEKEFGFVLIGLLFVISGFGGSLLSALFIGE- 184
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
++SVGASGALFGLLG LSE++TNW+LY K ++ + VI +N+A+G +P +DN
Sbjct: 185 ----KVSVGASGALFGLLGGMLSELLTNWSLYEKKLGALFTFVFVIAINLAVGVLPHVDN 240
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGGF++G LLGF+ L+RPQ+G++ Y KPK+ +Q + W++++++L
Sbjct: 241 FAHIGGFLSGFLLGFVFLIRPQFGWIKQRNAPQPYSPTLIKPKFNKYQCISWILALILLI 300
Query: 241 V 241
V
Sbjct: 301 V 301
>gi|195652545|gb|ACG45740.1| membrane protein [Zea mays]
Length = 334
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 119/247 (48%), Positives = 167/247 (67%), Gaps = 13/247 (5%)
Query: 1 MYVNNCPKNLGEDR------CVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVV 54
MYVNNCP + R CV L RFSFQP SEN L GPS+ATL+KLG L + VV
Sbjct: 58 MYVNNCPAHAASSRRGGAGSCVARGFLHRFSFQPLSENPLLGPSSATLQKLGALVWDKVV 117
Query: 55 YDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
+ + +R +C+WLHA V HLL N ++++ IG++LE+ FG++R+G++Y++SG GG +LS
Sbjct: 118 REHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGIIYLVSGVGGSVLSS 177
Query: 115 LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF 174
L + ISVGASGALFGLLGA LSE+ TNWT+Y NK ++ L++VI +N+AIG
Sbjct: 178 LFIRNN-----ISVGASGALFGLLGAMLSELFTNWTIYANKAAALVTLLVVIAINLAIGI 232
Query: 175 MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVI 234
+P +DN AHIGGF+ G LLGF+LL+RP YG++ Y P ++ + KY +Q L +
Sbjct: 233 LPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWMQ-RYALPS-DVKYTTKKYLAYQWALLAV 290
Query: 235 SVVVLFV 241
+ V+ +
Sbjct: 291 ASVLAVI 297
>gi|224090695|ref|XP_002309063.1| predicted protein [Populus trichocarpa]
gi|222855039|gb|EEE92586.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/228 (51%), Positives = 157/228 (68%), Gaps = 8/228 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVNNCPKN F LGRFSFQP EN L GPS+ +L+K+G L VV + +
Sbjct: 52 MYVNNCPKNYVSCIARF---LGRFSFQPFKENPLLGPSSISLQKMGALDVQKVVDGHQWW 108
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +C WLH V HLL N L++L IG++LE++FGF+++GLLYV+SGFGG LLS L +
Sbjct: 109 RLITCNWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISGFGGSLLSALFIQSN 168
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG+ LSE+ITNWT+Y N+ + L+++I VN+A+G +P +DN
Sbjct: 169 -----ISVGASGALFGLLGSMLSELITNWTIYANQVAAFITLVVIIAVNLALGILPHVDN 223
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQ 228
AHIGGF++G LLGF+ L+RPQ+G+ S GY K K++ +Q
Sbjct: 224 FAHIGGFLSGFLLGFVFLIRPQFGWFSQRRAPLGYIPASVKSKFKTYQ 271
>gi|242079729|ref|XP_002444633.1| hypothetical protein SORBIDRAFT_07g025140 [Sorghum bicolor]
gi|241940983|gb|EES14128.1| hypothetical protein SORBIDRAFT_07g025140 [Sorghum bicolor]
Length = 332
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 116/234 (49%), Positives = 164/234 (70%), Gaps = 14/234 (5%)
Query: 1 MYVNNCPKNLGEDR------CVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVV 54
M+VN+CP++ CV L RFSFQP EN LFGPS+ATL+K+G L+ VV
Sbjct: 57 MFVNDCPRHGSALGGGAGSGCVAAGLLRRFSFQPLRENPLFGPSSATLEKMGALNWAKVV 116
Query: 55 YDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
++ + +R SC+WLHA ++HL+ N L++LFIG++LE+ FGF+RIG++Y++SGFGG +LS
Sbjct: 117 HEHQGWRLISCIWLHAGLVHLVVNMLSLLFIGIRLEQQFGFVRIGVIYLISGFGGSVLSA 176
Query: 115 LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF 174
L + ISVGASGALFGLLG+ LSE+I NWT+Y+NK +I L+ +I +N+AIG
Sbjct: 177 LFLHSN----YISVGASGALFGLLGSMLSELIMNWTIYSNKAAAIITLLFIIAINLAIGI 232
Query: 175 MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQ 228
+P DN AHIGGF +G LLGF+LL RPQ+G++ + ++ PKY+ +Q
Sbjct: 233 LPHADNFAHIGGFASGFLLGFVLLARPQFGWMERSELPQ----TNQPPKYKLYQ 282
>gi|357159526|ref|XP_003578474.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 330
Score = 229 bits (585), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 164/233 (70%), Gaps = 17/233 (7%)
Query: 1 MYVNNCPKN---LGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDG 57
M+VN+CP++ LG CV L RFSFQP EN L GPS+ATL K+G L N VV++
Sbjct: 60 MWVNDCPRHGSALGGG-CVV-GFLRRFSFQPLRENPLLGPSSATLGKMGALDWNKVVHEH 117
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +R SC+WLHA +IHL+ N L++LFIG++LE+ FGF+RIG +Y+LSGFGG +LS L
Sbjct: 118 QGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVRIGAIYLLSGFGGSVLSALFL 177
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ ISVGASGALFGLLG+ LSE+I NWT+Y+NK +I L+ +I +NMAIG +P
Sbjct: 178 RSN----YISVGASGALFGLLGSMLSELIMNWTIYSNKVAAIITLLFIIAINMAIGILPH 233
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNH--KKPKYQCHQ 228
DN AHIGGFV G LLGF+LL RPQ+G++ EL H + PKY+ +Q
Sbjct: 234 ADNFAHIGGFVTGFLLGFVLLARPQFGWME------RNELPHTNQPPKYKAYQ 280
>gi|194688302|gb|ACF78235.1| unknown [Zea mays]
Length = 336
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 166/247 (67%), Gaps = 13/247 (5%)
Query: 1 MYVNNCPKNLGEDR------CVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVV 54
MYVNNCP + R CV L RFSFQP SEN L GPS+ATL+KLG L + VV
Sbjct: 60 MYVNNCPAHAASSRHGGAGSCVARGFLHRFSFQPLSENPLLGPSSATLQKLGALVWDKVV 119
Query: 55 YDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
+ + +R +C+WLHA V HLL N ++++ IG++LE+ FG++R+G++Y++SG GG +LS
Sbjct: 120 REHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGIIYLVSGVGGSVLSS 179
Query: 115 LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF 174
L + ISVGASGALFGLLGA LSE+ TNWT+Y NK ++ L++VI +N+AIG
Sbjct: 180 LFIRNN-----ISVGASGALFGLLGAMLSELFTNWTIYANKAAALVTLLVVIAINLAIGI 234
Query: 175 MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVI 234
+P +DN AHIGGF+ G LLGF+ L+RP YG++ Y P ++ + KY +Q L +
Sbjct: 235 LPHVDNFAHIGGFLTGFLLGFVFLMRPHYGWMQ-RYALPS-DVKYTTKKYLVYQWALLAV 292
Query: 235 SVVVLFV 241
+ V+ +
Sbjct: 293 ASVLAVI 299
>gi|297810841|ref|XP_002873304.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319141|gb|EFH49563.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 346
Score = 229 bits (584), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 120/229 (52%), Positives = 159/229 (69%), Gaps = 10/229 (4%)
Query: 1 MYVNNCPKNLGEDR----CVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYD 56
M+VNNCPK+ R CV LGR SF+P N LFGPS+ TL+KLG L + VV
Sbjct: 73 MFVNNCPKHFESHRLRGNCVAR-FLGRLSFEPLRTNPLFGPSSHTLEKLGALEWSKVVEK 131
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
E +R +C+WLHA VIHL N L+++FIG++LE+ FGF+RIG++Y+LSG GG +LS L
Sbjct: 132 KEGWRLLTCIWLHAGVIHLGANMLSLIFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLF 191
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP 176
S ISVGASGALFGLLG+ LSE+ TNWT+Y+NK ++ L+ VI +N+AIG +P
Sbjct: 192 IRNS-----ISVGASGALFGLLGSMLSELFTNWTIYSNKIAALLTLLFVILINLAIGILP 246
Query: 177 GIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQ 225
+DN AH+GGFV G LLGFILL RPQ+ +++ ++ G L +K YQ
Sbjct: 247 HVDNFAHVGGFVTGFLLGFILLARPQFKWLARVHMPQGTPLRYKYKPYQ 295
>gi|242049912|ref|XP_002462700.1| hypothetical protein SORBIDRAFT_02g030450 [Sorghum bicolor]
gi|241926077|gb|EER99221.1| hypothetical protein SORBIDRAFT_02g030450 [Sorghum bicolor]
Length = 325
Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 159/230 (69%), Gaps = 12/230 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY NNCPKN + L RFSFQP EN L GPS++TL+K+G L N +V+ + +
Sbjct: 56 MYENNCPKNRSQLGGCVAGFLRRFSFQPLRENPLLGPSSSTLEKMGALDWNKIVHQNQGW 115
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA +IHL+ N L++LFIG++LE+ FGF+RIG +Y+LSGFGG +LS L +
Sbjct: 116 RLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVRIGAIYLLSGFGGSVLSALFLRNN 175
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG+ LSE++ NWT+Y+NK +I L+ ++ +N+AIG +P DN
Sbjct: 176 ----YISVGASGALFGLLGSMLSELLMNWTIYSNKAAAIITLLFIVALNLAIGILPHADN 231
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL--NHKKPKYQCHQ 228
AHIGGF G LLGF+LL RPQ+ ++ +EL ++ PKY+ +Q
Sbjct: 232 FAHIGGFATGFLLGFVLLARPQFSWME------RHELPQTNQPPKYKAYQ 275
>gi|116310009|emb|CAH67035.1| OSIGBa0139P06.8 [Oryza sativa Indica Group]
gi|218195395|gb|EEC77822.1| hypothetical protein OsI_17028 [Oryza sativa Indica Group]
Length = 342
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/239 (47%), Positives = 159/239 (66%), Gaps = 12/239 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY NNCP N G CV L R SFQP EN + GPS ATL+K G L VV+ + +
Sbjct: 77 MYYNNCPANGGRRDCVGRSFLRRLSFQPLRENPVLGPSAATLRKYGALDWYGVVHGNQAW 136
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R + WLHA +IHL N +++L IG++LE+ FGF ++GL+Y++SGFGG +LS L +
Sbjct: 137 RLETSTWLHAGLIHLAANMISLLLIGIRLEQQFGFWKVGLVYLVSGFGGSVLSVLFISRN 196
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
I+VGASGALFGLLGA LSE+ITNWT+Y+N+C ++ LI++ +N+A+G +P +DN
Sbjct: 197 ----GITVGASGALFGLLGAMLSELITNWTIYSNRCAAMVNLIIIAAINLALGILPRVDN 252
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
AHIGGF G LLGF+LL++PQ+G+ +++ K KY Q +L +SV +L
Sbjct: 253 FAHIGGFATGFLLGFVLLIQPQFGWSE--------QVSSAKSKYNAFQIILLTLSVALL 303
>gi|115459992|ref|NP_001053596.1| Os04g0569300 [Oryza sativa Japonica Group]
gi|38344377|emb|CAE02252.2| OSJNBb0032E06.11 [Oryza sativa Japonica Group]
gi|113565167|dbj|BAF15510.1| Os04g0569300 [Oryza sativa Japonica Group]
gi|215704480|dbj|BAG93914.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 342
Score = 228 bits (582), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/239 (47%), Positives = 159/239 (66%), Gaps = 12/239 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY NNCP N G CV L R SFQP EN + GPS ATL+K G L VV+ + +
Sbjct: 77 MYYNNCPANGGRRDCVGRSFLRRLSFQPLRENPVLGPSAATLRKYGALDWYGVVHGNQAW 136
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R + WLHA +IHL N +++L IG++LE+ FGF ++GL+Y++SGFGG +LS L +
Sbjct: 137 RLETSTWLHAGLIHLAANMISLLIIGIRLEQQFGFWKVGLVYLVSGFGGSVLSVLFISRN 196
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
I+VGASGALFGLLGA LSE+ITNWT+Y+N+C ++ LI++ +N+A+G +P +DN
Sbjct: 197 ----GITVGASGALFGLLGAMLSELITNWTIYSNRCAAMVNLIIIAAINLALGILPRVDN 252
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
AHIGGF G LLGF+LL++PQ+G+ +++ K KY Q +L +SV +L
Sbjct: 253 FAHIGGFATGFLLGFVLLIQPQFGWSE--------QVSSAKSKYNAFQIILLTLSVALL 303
>gi|242074036|ref|XP_002446954.1| hypothetical protein SORBIDRAFT_06g025770 [Sorghum bicolor]
gi|241938137|gb|EES11282.1| hypothetical protein SORBIDRAFT_06g025770 [Sorghum bicolor]
Length = 340
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 115/228 (50%), Positives = 159/228 (69%), Gaps = 13/228 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M+ NNCP+ G+ CV L RFSFQP EN L GP+ ATL+K G L VV+ + +
Sbjct: 76 MFYNNCPRGGGD--CVGRGFLRRFSFQPLKENPLLGPTAATLQKYGALDWYKVVHGNQAW 133
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC WLHA +IHLL N ++++FIGV+LE+ FGF R+GL+Y++SGFGG +LS L +
Sbjct: 134 RLESCTWLHAGLIHLLANMISLIFIGVRLEQQFGFWRVGLVYLVSGFGGSVLSVLFIRKG 193
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
+SVGASGALFGLLGA LSE+ITNW++YTN+ ++ LI++ +N+A+G +P +DN
Sbjct: 194 -----VSVGASGALFGLLGAMLSELITNWSIYTNRFAAMLNLIIIAAINLALGILPHVDN 248
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQ 228
AHIGGF G LLGF+LL++PQ+G++ PY + K KY+ +Q
Sbjct: 249 FAHIGGFATGFLLGFVLLIQPQFGWLEQPYGS------KTKSKYKAYQ 290
>gi|357114368|ref|XP_003558972.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 331
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 124/251 (49%), Positives = 168/251 (66%), Gaps = 21/251 (8%)
Query: 1 MYVNNCPK---NLG-------EDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSR 50
MY NNCP N G + +CV LGRFSFQP +N L GPS+ATL+K+G L
Sbjct: 52 MYYNNCPAHNANTGTRGGSKQQQQCV-AGFLGRFSFQPLRQNPLLGPSSATLEKMGALVW 110
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
+ VV+ + +R SCMWLHA ++HLL N L++LFIG++LE+ FG++RIG +Y+LSG GG
Sbjct: 111 DKVVHSHQGWRLLSCMWLHAGILHLLANMLSLLFIGLRLEQQFGYVRIGAIYLLSGIGGS 170
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
+LS L S ISVGASGALFGLLGA LSE++TNWT+YTNK ++ L+ VI VN+
Sbjct: 171 VLSSLFIRTS-----ISVGASGALFGLLGAMLSELLTNWTIYTNKVAAVMTLLFVITVNL 225
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKL 230
+G +P ++N AHIGGF+AG LLGF++L+RP YG++ + G + KY +Q
Sbjct: 226 VLGILPHVNNFAHIGGFLAGFLLGFVVLMRPHYGWMERYSLPAGTPCTSR--KYLLYQ-- 281
Query: 231 LWVISVVVLFV 241
WV+ V L +
Sbjct: 282 -WVLMAVALLL 291
>gi|363808368|ref|NP_001242000.1| uncharacterized protein LOC100784671 [Glycine max]
gi|255639055|gb|ACU19828.1| unknown [Glycine max]
Length = 330
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/240 (53%), Positives = 175/240 (72%), Gaps = 11/240 (4%)
Query: 4 NNCP-KNLG-EDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYR 61
N+CP KNLG E CV LGRFSFQP EN LFGPS++TL K+G L + VV + +R
Sbjct: 62 NDCPRKNLGFEGDCVAR-FLGRFSFQPLRENPLFGPSSSTLTKMGALRWDDVVNHHQAWR 120
Query: 62 FFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQ 121
+C+WLHA V+HL N L+++FIG++LE+ FGF+RIG++Y+LSGFGG +LS L +
Sbjct: 121 LVTCIWLHAGVVHLAANMLSLVFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSSLFIRNN- 179
Query: 122 QTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNM 181
ISVGASGALFGLLGA LSE+ITNW++YTNK ++ L+ +I +N+AIG +P +D+
Sbjct: 180 ----ISVGASGALFGLLGAMLSELITNWSIYTNKAAALFTLLFIIVINLAIGMLPHVDDF 235
Query: 182 AHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLFV 241
AHIGGF++G LLGFILLLRPQ+G++ + G H K KY+ +Q +LW++S ++L V
Sbjct: 236 AHIGGFLSGFLLGFILLLRPQFGWLEQQRLHAGV---HLKSKYKAYQYVLWIVSAILLIV 292
>gi|294845|gb|AAA02747.1| membrane protein [Saccharum hybrid cultivar H65-7052]
Length = 325
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 160/230 (69%), Gaps = 12/230 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY NNCPK+ + L RFSFQP EN L GPS++TL+K+G L N +V+ + +
Sbjct: 56 MYENNCPKHGSQLGGCVAGFLRRFSFQPLRENPLLGPSSSTLEKMGALDWNKIVHQDQGW 115
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA +IHL+ N L++LFIG++LE+ FGF+RIG +Y+LSGFGG +LS L +
Sbjct: 116 RLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVRIGAIYLLSGFGGSVLSALFLRNN 175
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG+ LSE++ NWT+Y+NK +I L+ +I +N+AIG +P +DN
Sbjct: 176 ----YISVGASGALFGLLGSMLSELLMNWTIYSNKAAAIITLLFIIALNLAIGILPHVDN 231
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL--NHKKPKYQCHQ 228
AHIGGF G LLGF+LL RPQ+ ++ +EL ++ PKY+ +Q
Sbjct: 232 FAHIGGFATGFLLGFVLLARPQFSWME------RHELPQTNQPPKYKAYQ 275
>gi|222617736|gb|EEE53868.1| hypothetical protein OsJ_00361 [Oryza sativa Japonica Group]
Length = 335
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 119/254 (46%), Positives = 168/254 (66%), Gaps = 20/254 (7%)
Query: 1 MYVNNCPKNL---------------GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKL 45
MY+N+CP ++ C LGRF+FQ EN L GPS+ATL K+
Sbjct: 1 MYINDCPAHMQATGDAIGGDVGEGAASQGCWLEPELGRFAFQSYKENPLIGPSSATLLKM 60
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
G L + V D E +R +C+WLHA V+H+L N L++L IG++LE++FGF+RIG LYV+S
Sbjct: 61 GALETSKVTNDHEGWRLITCIWLHAGVVHILANMLSLLLIGIRLEKEFGFMRIGTLYVIS 120
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G GG LLS L + ISVGASGALFGLLG+ LSE+ITNWT+Y NK ++ L+++
Sbjct: 121 GVGGSLLSALFMVSN-----ISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVII 175
Query: 166 IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQ 225
I +N+A+G +P +DN AH+GGF +G LGF+LL+RPQ+GY++ G + K KY+
Sbjct: 176 ILINLAVGILPHVDNFAHLGGFTSGFFLGFVLLVRPQFGYINQKNSPLGLPMGTTKSKYK 235
Query: 226 CHQKLLWVISVVVL 239
+Q +LWVI+ ++L
Sbjct: 236 TYQIILWVIATLIL 249
>gi|326532882|dbj|BAJ89286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 226 bits (577), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 112/217 (51%), Positives = 155/217 (71%), Gaps = 10/217 (4%)
Query: 1 MYVNNCPKNL----GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYD 56
MY NNCP + RCV L RF+F+P S+N L GPS+ATL+KLG L VV++
Sbjct: 51 MYANNCPAHARGGRSGRRCVGAGLLRRFAFEPLSQNPLLGPSSATLQKLGALVWEKVVHE 110
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
+ +R +C+WLHA V+HLL N L+++ +G++LE+ FGF+R+G++Y++SG GG ++S L
Sbjct: 111 QQGWRLVTCIWLHAGVVHLLANMLSLVLVGLRLEQQFGFVRVGVIYLVSGVGGSVMSSLF 170
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP 176
++ ISVGASGALFGLLGA LSE+ TNWT+YTNK ++ L+ VI VN+AIG +P
Sbjct: 171 IRDN-----ISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTLLFVIAVNLAIGILP 225
Query: 177 GIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAP 213
+DN AHIGGF+ G LLGF+LL+RP YG+ Y+ P
Sbjct: 226 HVDNFAHIGGFLTGFLLGFVLLMRPHYGWAQ-RYVLP 261
>gi|218187509|gb|EEC69936.1| hypothetical protein OsI_00380 [Oryza sativa Indica Group]
Length = 428
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 119/254 (46%), Positives = 168/254 (66%), Gaps = 20/254 (7%)
Query: 1 MYVNNCPKNL---------------GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKL 45
MY+N+CP ++ C LGRF+FQ EN L GPS+ATL K+
Sbjct: 94 MYINDCPAHMQATGDAIGGDVGEGAASQGCWLEPELGRFAFQSYKENPLIGPSSATLLKM 153
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
G L + V D E +R +C+WLHA V+H+L N L++L IG++LE++FGF+RIG LYV+S
Sbjct: 154 GALETSKVTNDHEGWRLITCIWLHAGVVHILANMLSLLLIGIRLEKEFGFMRIGTLYVIS 213
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G GG LLS L + ISVGASGALFGLLG+ LSE+ITNWT+Y NK ++ L+++
Sbjct: 214 GVGGSLLSALFMVSN-----ISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVII 268
Query: 166 IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQ 225
I +N+A+G +P +DN AH+GGF +G LGF+LL+RPQ+GY++ G + K KY+
Sbjct: 269 ILINLAVGILPHVDNFAHLGGFTSGFFLGFVLLVRPQFGYINQKNSPLGLPMGTTKSKYK 328
Query: 226 CHQKLLWVISVVVL 239
+Q +LWVI+ ++L
Sbjct: 329 TYQIILWVIATLIL 342
>gi|115450317|ref|NP_001048759.1| Os03g0116400 [Oryza sativa Japonica Group]
gi|108705857|gb|ABF93652.1| membrane protein, putative, expressed [Oryza sativa Japonica Group]
gi|113547230|dbj|BAF10673.1| Os03g0116400 [Oryza sativa Japonica Group]
gi|125542142|gb|EAY88281.1| hypothetical protein OsI_09736 [Oryza sativa Indica Group]
gi|125584694|gb|EAZ25358.1| hypothetical protein OsJ_09173 [Oryza sativa Japonica Group]
gi|215692511|dbj|BAG87931.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 325
Score = 226 bits (576), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 118/243 (48%), Positives = 167/243 (68%), Gaps = 10/243 (4%)
Query: 1 MYVNNCPKNLGED--RCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGE 58
MY NNCP + +C+ LGRFSFQP EN L GPS+ATL+K+G L + VV++ +
Sbjct: 54 MYANNCPLHTPPRSGKCI-ARFLGRFSFQPLHENPLLGPSSATLQKMGALVWDKVVHEHQ 112
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
YR + +WLHA V+HL+ N L+++FIG++LE+ FG++RIG +Y+LSG GG +LS L
Sbjct: 113 GYRLITSIWLHAGVLHLVANMLSLIFIGLRLEQQFGYVRIGAIYLLSGLGGSVLSSLFIR 172
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
ISVGASGALFGLLGA LSE++TNWT+YTNK ++ L+ VI VN+A+G +P +
Sbjct: 173 N-----HISVGASGALFGLLGAMLSELLTNWTIYTNKVAAVITLLFVIAVNLALGILPHV 227
Query: 179 DNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
+N AHIGGF+ G LLGF+LL+RP +G++ + G + K KY +Q +L I+ +
Sbjct: 228 NNFAHIGGFLTGFLLGFVLLMRPHFGWMERYSLPSGSPCSSK--KYLVYQWILLAIATAL 285
Query: 239 LFV 241
+ V
Sbjct: 286 VIV 288
>gi|147777535|emb|CAN75940.1| hypothetical protein VITISV_040961 [Vitis vinifera]
Length = 292
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 121/239 (50%), Positives = 172/239 (71%), Gaps = 9/239 (3%)
Query: 4 NNCPK-NLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRF 62
N+CPK N G + L R SFQP EN LFGPS++TL+KLGGL N VVY + +R
Sbjct: 61 NDCPKKNTGIEGACVAKFLRRLSFQPLRENPLFGPSSSTLEKLGGLEWNKVVYGDQGWRL 120
Query: 63 FSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQ 122
+C+WLHA VIHLL N L+++FIG++LE+ FGF+RIG++Y++SGFGG +LS L +
Sbjct: 121 VTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRIGIIYLVSGFGGSILSSLFIQHN-- 178
Query: 123 TLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMA 182
ISVGASGALFGLLGA LSE+ITNW++YTNK ++ L+++I +N+A+G +P +DN A
Sbjct: 179 ---ISVGASGALFGLLGAMLSELITNWSIYTNKAAALFTLVVIIAINLAVGILPHVDNFA 235
Query: 183 HIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLFV 241
HIGGF+ G LLGF+LLLRPQ+G+V + + + K++ +Q + W++++ +L V
Sbjct: 236 HIGGFLTGFLLGFMLLLRPQFGWVKRQHRPADARV---QSKHKVYQYVFWLVAMALLIV 291
>gi|225426828|ref|XP_002283259.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Vitis vinifera]
gi|297742575|emb|CBI34724.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 122/239 (51%), Positives = 171/239 (71%), Gaps = 9/239 (3%)
Query: 4 NNCPK-NLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRF 62
N+CPK N G + L R SFQP EN LFGPS++TL+KLGGL N VVY + +R
Sbjct: 61 NDCPKKNTGIEGACVAKFLRRLSFQPLRENPLFGPSSSTLEKLGGLEWNKVVYGDQGWRL 120
Query: 63 FSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQ 122
+C+WLHA VIHLL N L+++FIG++LE+ FGF+RIG++Y++SGFGG +LS L +
Sbjct: 121 VTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRIGIIYLVSGFGGSILSSLFIQHN-- 178
Query: 123 TLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMA 182
ISVGASGALFGLLGA LSE+ITNW++YTNK ++ L+++I +N+A+G +P +DN A
Sbjct: 179 ---ISVGASGALFGLLGAMLSELITNWSIYTNKAAALFTLVVIIAINLAVGILPHVDNFA 235
Query: 183 HIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLFV 241
HIGGF+ G LLGF+LLLRPQ+G+V + + K K++ +Q W++++ +L V
Sbjct: 236 HIGGFLTGFLLGFMLLLRPQFGWVKRQHRPADARV---KSKHKVYQYAFWLVAMALLIV 291
>gi|226494811|ref|NP_001140268.1| uncharacterized protein LOC100272312 [Zea mays]
gi|194698764|gb|ACF83466.1| unknown [Zea mays]
gi|195610418|gb|ACG27039.1| membrane protein [Zea mays]
gi|413919340|gb|AFW59272.1| membrane protein [Zea mays]
Length = 340
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/228 (49%), Positives = 159/228 (69%), Gaps = 13/228 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M+ NNCP++ G+ CV L RFSFQP EN L GP+ ATL++ G L VV+ + +
Sbjct: 76 MFYNNCPRSGGD--CVGRGFLRRFSFQPLKENPLLGPTAATLQRYGALDWYKVVHGNQAW 133
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC WLHA +IHLL N ++++FIGV+LE+ FGF ++GL+Y++SGFGG +LS +
Sbjct: 134 RLESCTWLHAGLIHLLANMISLIFIGVRLEQQFGFWKVGLVYLVSGFGGSVLSVFFIRKG 193
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
+SVGASGALFGLLGA LSE+ITNW++YTN+ ++ LI++ +N+A+G +P +DN
Sbjct: 194 -----VSVGASGALFGLLGAMLSELITNWSIYTNRFAAMLNLIIIAAINLALGILPHVDN 248
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQ 228
AHIGGF G LLGF+LL++PQ+G++ P+ A K KY+ +Q
Sbjct: 249 FAHIGGFATGFLLGFVLLIQPQFGWLEQPFGA------KTKSKYKAYQ 290
>gi|357165337|ref|XP_003580349.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 343
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 161/238 (67%), Gaps = 12/238 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY N+CP++ G CV L RFSFQP EN LFGPS TL K GGL R VV E +
Sbjct: 78 MYYNDCPRS-GNGDCVGRGVLRRFSFQPLKENPLFGPSATTLGKYGGLDRYKVVRGNEAW 136
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R + WLHA +IHL N ++++F+GV+LE+ FGF ++GL+Y++SG GG +LS L
Sbjct: 137 RLETSTWLHAGLIHLGANMISLIFVGVRLEQQFGFWKVGLVYLVSGLGGSILSVLFIRNG 196
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
+SVGASGALFGLLGA LSE+ITNW++YTN+ ++ LI++ +N+A+G +P +DN
Sbjct: 197 -----VSVGASGALFGLLGAMLSELITNWSIYTNRIAAMANLIIIAAINLALGILPHVDN 251
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
AHIGGF G LLGF+LL++P++G++ P+ A K KY Q +L V+++++
Sbjct: 252 FAHIGGFATGFLLGFVLLIQPRFGWLEQPFGA------KSKSKYTACQIILLVVALIL 303
>gi|326519200|dbj|BAJ96599.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 171/241 (70%), Gaps = 7/241 (2%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M+VN+CP N C LGRF+FQP EN L GPS+ TL K+G L + VV + +
Sbjct: 63 MFVNDCP-NRSSGNCS-AGFLGRFAFQPLKENPLLGPSSTTLLKMGALDVSKVVQGRQGW 120
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +C+WLHA V+HLL N L +LFIG++LE++FGF+RIGL+Y++SGFGG L+S L S
Sbjct: 121 RLITCIWLHAGVVHLLINVLCLLFIGIRLEQEFGFVRIGLVYLISGFGGSLMSALFIRAS 180
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGL+G+ LSE+ITNW+LY NK ++ L+LVI VN+A+G +P +DN
Sbjct: 181 -----ISVGASGALFGLIGSMLSELITNWSLYANKVAALLTLVLVIVVNLALGILPRVDN 235
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGG ++G LLGF++ +RPQ+ +++ + PG + + K++ +Q +LW+++ ++L
Sbjct: 236 FAHIGGLISGFLLGFVVFIRPQFAWINQRRVTPGPQTAPAERKHKTYQYILWIVAAILLI 295
Query: 241 V 241
+
Sbjct: 296 I 296
>gi|326528413|dbj|BAJ93395.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 171/241 (70%), Gaps = 7/241 (2%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M+VN+CP N C LGRF+FQP EN L GPS+ TL K+G L + VV + +
Sbjct: 63 MFVNDCP-NRSSGNCS-AGFLGRFAFQPLKENPLLGPSSTTLLKMGALDVSKVVQGRQGW 120
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +C+WLHA V+HLL N L +LFIG++LE++FGF+RIGL+Y++SGFGG L+S L S
Sbjct: 121 RLITCIWLHAGVVHLLINVLCLLFIGIRLEQEFGFVRIGLVYLISGFGGSLMSALFIRAS 180
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGL+G+ LSE+ITNW+LY NK ++ L+LVI VN+A+G +P +DN
Sbjct: 181 -----ISVGASGALFGLIGSMLSELITNWSLYANKVAALLTLVLVIVVNLALGILPRVDN 235
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
AHIGG ++G LLGF++ +RPQ+ +++ + PG + + K++ +Q +LW+++ ++L
Sbjct: 236 FAHIGGLISGFLLGFVVFIRPQFAWINQRRVTPGPQTAPAERKHKTYQYILWIVAAILLI 295
Query: 241 V 241
+
Sbjct: 296 I 296
>gi|356534153|ref|XP_003535622.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 369
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 125/241 (51%), Positives = 177/241 (73%), Gaps = 11/241 (4%)
Query: 1 MYVNNCPKN--LGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGE 58
MY+NNCP+N + RCV LGRFSFQP EN L GPS++TL K+G L + VV +
Sbjct: 58 MYINNCPRNNIRFQGRCVAR-FLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVVNRHQ 116
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
+R +C+WLHA VIHLL N L+++FIG++LE+ FGF++IG++Y++SGFGG +LS L
Sbjct: 117 GWRLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVLSSLFIR 176
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
+ ISVGASGALFGLLGA LSE+ITNWT+Y+NK +++ L+++I +N+ IG +P +
Sbjct: 177 D-----HISVGASGALFGLLGAMLSELITNWTIYSNKAMALITLLVIIVINLGIGILPHV 231
Query: 179 DNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
DN AHIGGF+ G+LLGFILL RPQ+G++ + G ++ K KY+ HQ +L V+S+++
Sbjct: 232 DNFAHIGGFLVGLLLGFILLPRPQFGWLEQRRLPAGVQM---KSKYKTHQYVLGVVSLIL 288
Query: 239 L 239
L
Sbjct: 289 L 289
>gi|357148757|ref|XP_003574883.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 321
Score = 224 bits (571), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 159/232 (68%), Gaps = 12/232 (5%)
Query: 1 MYVNNCPKNL----GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYD 56
MY N+CP++ G D L RF+FQP EN L GPS+ATL+KLG L VV+
Sbjct: 48 MYNNDCPRHGSTLGGGDAPCVAGFLRRFAFQPLRENPLLGPSSATLEKLGALDWAKVVHQ 107
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
+ +R SC+WLHA +IHL+ N L++LFIG++LE+ FGF+RIG++Y+LSGFGG +LS L
Sbjct: 108 HQGWRLISCIWLHAGLIHLIVNMLSLLFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSALF 167
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP 176
ISVGASGALFGLLG+ LSE+I NWT+Y+NK +I L+ +I +N+AIG +P
Sbjct: 168 LRNH----YISVGASGALFGLLGSMLSELIMNWTIYSNKAAAIITLLFIIVINLAIGILP 223
Query: 177 GIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQ 228
DN AHIGGFV+G L+GF+LL RPQ+G++ + + PKY+ +Q
Sbjct: 224 HADNFAHIGGFVSGFLIGFVLLARPQFGWMERNELPQ----TDQPPKYKTYQ 271
>gi|115483002|ref|NP_001065094.1| Os10g0521900 [Oryza sativa Japonica Group]
gi|113639703|dbj|BAF27008.1| Os10g0521900, partial [Oryza sativa Japonica Group]
Length = 338
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 161/232 (69%), Gaps = 9/232 (3%)
Query: 7 PKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCM 66
P L R L RFSFQP SEN L GPS+ATL+K+G L + VV++ + +R +C+
Sbjct: 76 PTPLAAARA--SGFLRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCI 133
Query: 67 WLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQI 126
WLHA V+HLL N L+++ IG++LE+ FG++RIG++Y++SG GG +LS L S I
Sbjct: 134 WLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGIIYLVSGIGGSVLSSLFIRNS-----I 188
Query: 127 SVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGG 186
SVGASGALFGLLGA LSE+ TNWT+YTNK ++ L++VI +N+AIG +P +DN AHIGG
Sbjct: 189 SVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTLLIVIAINLAIGILPHVDNFAHIGG 248
Query: 187 FVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
F+ G LLGFI L+RP YG++ Y+ P + + KY +Q +L ++ V+
Sbjct: 249 FLTGFLLGFIFLMRPHYGWMQ-RYVLPS-SVKYTSKKYLAYQWILLAVASVL 298
>gi|242040475|ref|XP_002467632.1| hypothetical protein SORBIDRAFT_01g031210 [Sorghum bicolor]
gi|241921486|gb|EER94630.1| hypothetical protein SORBIDRAFT_01g031210 [Sorghum bicolor]
Length = 335
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 117/247 (47%), Positives = 165/247 (66%), Gaps = 13/247 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDH------LGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVV 54
MYVNNCP + L RFSFQP SEN L GPS+ATL+KLG L + VV
Sbjct: 59 MYVNNCPAHASRRGGGGAGACVARGFLHRFSFQPLSENPLLGPSSATLQKLGALVWDKVV 118
Query: 55 YDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
+ + +R +C+WLHA V HLL N ++++ IG++LE+ FG++RIG++Y++SG GG +LS
Sbjct: 119 QEHQGWRLVTCIWLHAGVAHLLANMVSLVLIGLRLEQQFGYVRIGIIYLVSGVGGSVLSS 178
Query: 115 LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF 174
L + ISVGASGALFGLLGA LSE+ TNWT+Y+NK ++ L++VI +N+AIG
Sbjct: 179 LFVRNT-----ISVGASGALFGLLGAMLSELFTNWTIYSNKAAALVTLLIVIAINLAIGI 233
Query: 175 MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVI 234
+P +DN AHIGGF+ G LLGF+ L+RP YG++ Y+ P ++ + KY +Q L +
Sbjct: 234 LPHVDNFAHIGGFLTGFLLGFVFLMRPHYGWMQ-RYVLPS-DVKYTSKKYLAYQWALLAV 291
Query: 235 SVVVLFV 241
+ V+ V
Sbjct: 292 ASVLAVV 298
>gi|413925083|gb|AFW65015.1| hypothetical protein ZEAMMB73_264327 [Zea mays]
Length = 322
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 115/232 (49%), Positives = 164/232 (70%), Gaps = 12/232 (5%)
Query: 1 MYVNNCPKN----LGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYD 56
M+VN+CP++ G CV L RFSFQP EN LFGPS+ATL+K+G L+ VV++
Sbjct: 49 MFVNDCPRHGSTLGGGAGCVAAGLLRRFSFQPLRENPLFGPSSATLEKMGALNWAKVVHE 108
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
+ +R SC+WLHA ++HL+ N L++LFIG++LE+ FGF+RIG++Y++SGFGG +LS L
Sbjct: 109 HQGWRLISCIWLHAGLVHLVVNMLSLLFIGIRLEQQFGFVRIGVIYLISGFGGSVLSALF 168
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP 176
+ +SVGASGALFGLLG+ LSE+I NWT+Y+NK +I L+ +I +N+AIG +P
Sbjct: 169 LHSN----YVSVGASGALFGLLGSMLSELIINWTIYSNKAAAIITLLFIIVINLAIGILP 224
Query: 177 GIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQ 228
DN AHIGGF +G L+GF+LL RPQ+G++ + + PKY+ +Q
Sbjct: 225 HADNFAHIGGFASGFLIGFVLLARPQFGWMERSELPQ----TSQPPKYKSYQ 272
>gi|15240744|ref|NP_196342.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
gi|7546703|emb|CAB87281.1| membrane protein [Arabidopsis thaliana]
gi|16648762|gb|AAL25572.1| AT5g07250/T28J14_190 [Arabidopsis thaliana]
gi|20466143|gb|AAM19993.1| AT5g07250/T28J14_190 [Arabidopsis thaliana]
gi|332003744|gb|AED91127.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
Length = 346
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 116/225 (51%), Positives = 154/225 (68%), Gaps = 8/225 (3%)
Query: 4 NNCPKNLGEDRCVFH---DHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
NNCP + R H LGR SF+P N LFGPS+ TL+KLG L + VV E +
Sbjct: 76 NNCPNHFESHRLRGHCVAKFLGRLSFEPLRTNPLFGPSSHTLEKLGALEWSKVVEKKEGW 135
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +C+WLHA VIHL N L+++FIG++LE+ FGF+RIG++Y+LSG GG +LS L S
Sbjct: 136 RLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNS 195
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG+ LSE+ TNWT+Y+NK ++ L+ VI +N+AIG +P +DN
Sbjct: 196 -----ISVGASGALFGLLGSMLSELFTNWTIYSNKIAALLTLLFVILINLAIGILPHVDN 250
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQ 225
AH+GGFV G LLGFILL RPQ+ +++ ++ G L +K YQ
Sbjct: 251 FAHVGGFVTGFLLGFILLARPQFKWLAREHMPQGTPLRYKYKTYQ 295
>gi|168030936|ref|XP_001767978.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680820|gb|EDQ67253.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 322
Score = 223 bits (567), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/230 (54%), Positives = 160/230 (69%), Gaps = 8/230 (3%)
Query: 1 MYVNNCPKNLGEDR-CVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MY NNCP N+G R CV R SFQP SEN L GPS+ATL+K+GGL +LVV +
Sbjct: 46 MYENNCPANIGYGRKCVLGSSFKRMSFQPWSENPLLGPSSATLQKMGGLRTDLVVDQKQG 105
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R SC+WLHA V HLL N +A+L G++LE DFGF+RIGLLY++SG GG LLS L
Sbjct: 106 WRLMSCVWLHAGVFHLLVNMIALLVFGIELERDFGFIRIGLLYLISGLGGSLLSSLFNHN 165
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+ ISVGASGALFGLLGA+ SE+ITNW+ Y ++C + LI+V GVN+AIG +P +D
Sbjct: 166 A-----ISVGASGALFGLLGATTSELITNWSRYRSRCSQLFQLIIVTGVNLAIGLLPRVD 220
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVS-GPYIAPGYELNHKKPKYQCHQ 228
N AHIGGFV G LLGFILL++ QY YV + P + H K +++ +Q
Sbjct: 221 NFAHIGGFVTGFLLGFILLMKEQYRYVQRSTLLDPRMDPQHVK-RFKTYQ 269
>gi|242042499|ref|XP_002468644.1| hypothetical protein SORBIDRAFT_01g049520 [Sorghum bicolor]
gi|241922498|gb|EER95642.1| hypothetical protein SORBIDRAFT_01g049520 [Sorghum bicolor]
Length = 326
Score = 222 bits (566), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/224 (50%), Positives = 152/224 (67%), Gaps = 9/224 (4%)
Query: 1 MYVNNCPKNLGEDR---CVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDG 57
MYVNNCP + R CV LGRFSFQP +N L GPS+ATL K+G L VV+
Sbjct: 54 MYVNNCPTHTTTPRDAKCV-ARFLGRFSFQPLRQNPLLGPSSATLTKMGALVWEKVVHHH 112
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +R S MWLHA V+HL+ N L +LF+G++LE+ FG++RIG +Y+LSG GG +LS L
Sbjct: 113 QGWRLLSSMWLHAGVLHLVANMLCLLFVGMRLEQQFGYVRIGAIYILSGLGGAVLSSLFI 172
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
ISVGASGALFGLLGA LSE+ITNWT+YTNK V++ L+ V VN+ +G +P
Sbjct: 173 RN-----HISVGASGALFGLLGAMLSELITNWTIYTNKAVAVATLLFVAAVNLVLGILPH 227
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
++N AHIGGF+AG LLG ++L+RP +G++ + G +K
Sbjct: 228 VNNFAHIGGFLAGFLLGLVVLMRPHFGWMERYSMPAGAPCTARK 271
>gi|357454153|ref|XP_003597357.1| Rhomboid family protein AtRBL1 [Medicago truncatula]
gi|355486405|gb|AES67608.1| Rhomboid family protein AtRBL1 [Medicago truncatula]
Length = 383
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 122/240 (50%), Positives = 169/240 (70%), Gaps = 7/240 (2%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVN+CP+N CV LGRFSFQP EN LFGPS+ TL+K+G L + VV++ E +
Sbjct: 64 MYVNDCPENAFHGTCV-APFLGRFSFQPLKENPLFGPSSFTLQKMGALEVDKVVHEHEGW 122
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLH IH+L N L++LFIG++LE++FGF+RIG LYV+SGFGG LLS L
Sbjct: 123 RLVSCIWLHGGAIHVLANMLSLLFIGIRLEQEFGFVRIGFLYVISGFGGSLLSSLFIQTG 182
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGASGALFGLLG LSE+ NWT+Y NK ++ LI+++ +N+A+G +P +DN
Sbjct: 183 -----ISVGASGALFGLLGGMLSELFINWTIYANKMAALLTLIIIVVINLAVGVLPHVDN 237
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKKPKYQCHQKLLWVISVVVL 239
AH+GGF +G LGF++L+RPQ+ ++S G + + K+ KY +Q +LWV+S ++L
Sbjct: 238 FAHLGGFGSGFFLGFVVLIRPQFKWISQQQSKSGSHAFSVKQNKYLPYQYVLWVLSFLLL 297
>gi|326488163|dbj|BAJ89920.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326499095|dbj|BAK06038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 109/213 (51%), Positives = 150/213 (70%), Gaps = 8/213 (3%)
Query: 1 MYVNNCPKNL---GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDG 57
MY N+CP+N CV L RFSFQP EN LFGPS+ATL K GGL R VV+
Sbjct: 73 MYYNDCPRNGRGGAAADCVGRGVLRRFSFQPLKENPLFGPSSATLGKYGGLDRYKVVHGN 132
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E +R + WLHA +IHL N ++++F+GV+LE+ FGF ++GL+Y+ SG GG +LS L
Sbjct: 133 EAWRLETSTWLHAGLIHLGANMISLIFVGVRLEQQFGFWKVGLVYLFSGLGGSVLSVLFI 192
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+SVGASGALFGLLGA LSE+ITNWT+YTN+ ++ LI++ +N+A+G +P
Sbjct: 193 RNG-----VSVGASGALFGLLGAMLSELITNWTIYTNRLAAMANLIIIAAINLALGILPH 247
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPY 210
+DN AHIGGF+ G LLGF+LL++P++G++ P+
Sbjct: 248 VDNFAHIGGFLTGFLLGFVLLIQPRFGWLEQPF 280
>gi|357444041|ref|XP_003592298.1| Rhomboid family member [Medicago truncatula]
gi|355481346|gb|AES62549.1| Rhomboid family member [Medicago truncatula]
Length = 314
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/247 (47%), Positives = 162/247 (65%), Gaps = 29/247 (11%)
Query: 1 MYVNNCPKNLGEDRCVFHDH--------LGRFSFQPRSENSLFGPSTATLKKLGGLSRNL 52
M +NNCP FH H L RFSFQP EN L GPS+ TL K+G L
Sbjct: 48 MGINNCPNTTFG----FHKHHHHCVARFLHRFSFQPFRENPLLGPSSLTLIKMGALRWVN 103
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
VV+ + +R F+C+WLHA +IHLL+N L ++ IG++LE+ FGF++IGL+Y+LSGFGG +
Sbjct: 104 VVHQHQEWRLFTCIWLHAGIIHLLSNMLCLVLIGIRLEQQFGFVKIGLIYLLSGFGGSVF 163
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAI 172
S + S ISVGAS ALFGLLGA +SE++TNWT+Y+NK +++ L+++I +N+ I
Sbjct: 164 SSIFIRNS-----ISVGASSALFGLLGAMISELLTNWTIYSNKVMALLTLLVMIAINLTI 218
Query: 173 GFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLW 232
G +P +DN+AHIGG V G LLGFILL RPQY V +K KY +Q +L
Sbjct: 219 GLLPRVDNLAHIGGLVVGFLLGFILLPRPQYDGVL------------RKSKYNAYQFVLG 266
Query: 233 VISVVVL 239
++S+V+L
Sbjct: 267 IVSLVLL 273
>gi|297849660|ref|XP_002892711.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338553|gb|EFH68970.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 307
Score = 214 bits (545), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/240 (45%), Positives = 154/240 (64%), Gaps = 7/240 (2%)
Query: 1 MYVNNCPKNL-GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
M++N+CPK G + LGRFSFQP EN L GPS++TL+KLG L VV E
Sbjct: 38 MFINDCPKTTRGANEDCVAKFLGRFSFQPLRENPLLGPSSSTLEKLGALDWRKVVQGNEK 97
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R + MWLHA + HL TN ++F G++LE+ FGFLRIGL+Y++SGFGG +LS L
Sbjct: 98 WRLITAMWLHAGIFHLFTNMFNVIFFGIRLEQQFGFLRIGLIYLISGFGGSILSALFLQN 157
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S ISVGASGAL GL+GA LSE++ NWT+Y +K ++ ++ +I +++AIG +P +D
Sbjct: 158 S-----ISVGASGALLGLIGAMLSELVINWTIYESKLCALFSILFIIALDLAIGLLPWVD 212
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
N AHIGG + G LGFILL++PQ G+ + Y K C L ++ +V+V+
Sbjct: 213 NFAHIGGLLTGFFLGFILLIQPQLGWEESRN-SSQYGARAKSKYNPCQYVLFFIAAVLVV 271
>gi|449460471|ref|XP_004147969.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 322
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 123/242 (50%), Positives = 175/242 (72%), Gaps = 10/242 (4%)
Query: 1 MYVNNCPK-NLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MYVNNCPK +LG + CV LGRFSF+P N LFGPS++TL+KLG L +V+ +
Sbjct: 53 MYVNNCPKHSLGSEECV-ARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQA 111
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R + +WLHA VIHLL N L+++FIG++LE+ FGF+R+G+LY+LSG GG +LS L
Sbjct: 112 WRLITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQN 171
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+ ISVGASGALFGLLGA LSE++TNWT+YT+K ++ LI++I +N+A+G +P +D
Sbjct: 172 N-----ISVGASGALFGLLGAMLSELLTNWTIYTDKAAALITLIVIIVINLAVGILPHVD 226
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
N AHIGGF+ G LLGFILLLRPQ+G++ ++ + PK++ +Q +L +++ +L
Sbjct: 227 NFAHIGGFLTGFLLGFILLLRPQFGWIERRHLPAN---SRAVPKHKLYQYILCFVALALL 283
Query: 240 FV 241
V
Sbjct: 284 IV 285
>gi|449494245|ref|XP_004159491.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 322
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 123/242 (50%), Positives = 175/242 (72%), Gaps = 10/242 (4%)
Query: 1 MYVNNCPK-NLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MYVNNCPK +LG + CV LGRFSF+P N LFGPS++TL+KLG L +V+ +
Sbjct: 53 MYVNNCPKHSLGSEECV-ARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQA 111
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R + +WLHA VIHLL N L+++FIG++LE+ FGF+R+G+LY+LSG GG +LS L
Sbjct: 112 WRLITGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQN 171
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+ ISVGASGALFGLLGA LSE++TNWT+YT+K ++ LI++I +N+A+G +P +D
Sbjct: 172 N-----ISVGASGALFGLLGAMLSELLTNWTIYTDKAAALITLIVIIVINLAVGILPHVD 226
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
N AHIGGF+ G LLGFILLLRPQ+G++ ++ + PK++ +Q +L +++ +L
Sbjct: 227 NFAHIGGFLTGFLLGFILLLRPQFGWIERRHLPAN---SRAVPKHKLYQYILCFVALALL 283
Query: 240 FV 241
V
Sbjct: 284 IV 285
>gi|9502383|gb|AAF88090.1|AC025417_18 T12C24.28 [Arabidopsis thaliana]
Length = 302
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 155/245 (63%), Gaps = 17/245 (6%)
Query: 1 MYVNNCPKNL-GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MY N+CPK G + L RFSFQP EN GPS++TL+KLG L VV E
Sbjct: 33 MYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLGPSSSTLEKLGALDWKKVVQGNEK 92
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R + MWLHA +IHL+ N ++ G++LE+ FGF+RIGL+Y++SGFGG +LS L +
Sbjct: 93 WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQK 152
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S ISVGASGAL GL+GA LSE++TNWT+Y +K ++ + +I +N+AIG +P +D
Sbjct: 153 S-----ISVGASGALLGLMGAMLSELLTNWTIYKSKLCALLSFLFIIAINLAIGLLPWVD 207
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYV----SGPYIAPGYELNHKKPKYQ-CHQKLLWVI 234
N AHIGG + G LGFILL++PQ G+ S Y A + KY C L +V
Sbjct: 208 NFAHIGGLLTGFCLGFILLMQPQSGWEEFRNSSQYGA------RARSKYNPCQYVLFFVA 261
Query: 235 SVVVL 239
+V+V+
Sbjct: 262 AVLVV 266
>gi|15222058|ref|NP_172735.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|145323878|ref|NP_001077528.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|334182523|ref|NP_001184975.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|17529034|gb|AAL38727.1| putative membrane protein [Arabidopsis thaliana]
gi|20259083|gb|AAM14257.1| putative membrane protein [Arabidopsis thaliana]
gi|332190800|gb|AEE28921.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|332190801|gb|AEE28922.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|332190802|gb|AEE28923.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
Length = 307
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 113/245 (46%), Positives = 155/245 (63%), Gaps = 17/245 (6%)
Query: 1 MYVNNCPKNL-GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MY N+CPK G + L RFSFQP EN GPS++TL+KLG L VV E
Sbjct: 38 MYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLGPSSSTLEKLGALDWKKVVQGNEK 97
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R + MWLHA +IHL+ N ++ G++LE+ FGF+RIGL+Y++SGFGG +LS L +
Sbjct: 98 WRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQK 157
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S ISVGASGAL GL+GA LSE++TNWT+Y +K ++ + +I +N+AIG +P +D
Sbjct: 158 S-----ISVGASGALLGLMGAMLSELLTNWTIYKSKLCALLSFLFIIAINLAIGLLPWVD 212
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYV----SGPYIAPGYELNHKKPKYQ-CHQKLLWVI 234
N AHIGG + G LGFILL++PQ G+ S Y A + KY C L +V
Sbjct: 213 NFAHIGGLLTGFCLGFILLMQPQSGWEEFRNSSQYGA------RARSKYNPCQYVLFFVA 266
Query: 235 SVVVL 239
+V+V+
Sbjct: 267 AVLVV 271
>gi|255635820|gb|ACU18258.1| unknown [Glycine max]
Length = 239
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 140/187 (74%), Gaps = 8/187 (4%)
Query: 1 MYVNNCPKN--LGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGE 58
MY+NNCP+N + RCV LGRFSFQP EN L GPS++TL K+G L + VV +
Sbjct: 57 MYINNCPRNNLRFQGRCVAR-FLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVVNRHQ 115
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
+R F+C+WLHA VIHLL N L+++FIG++LE+ FGF++IG++Y++SGFGG +LS L
Sbjct: 116 GWRLFTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVLSSLFIR 175
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
+ ISVGASGALFGLLGA LSE+ITNWT+Y+NK +++ L+++I +N+ IG +P +
Sbjct: 176 D-----HISVGASGALFGLLGAMLSELITNWTIYSNKAMALITLLVIIVINLGIGILPHV 230
Query: 179 DNMAHIG 185
DN AHIG
Sbjct: 231 DNFAHIG 237
>gi|226532718|ref|NP_001149879.1| membrane protein [Zea mays]
gi|194700888|gb|ACF84528.1| unknown [Zea mays]
gi|195635233|gb|ACG37085.1| membrane protein [Zea mays]
gi|414864370|tpg|DAA42927.1| TPA: membrane protein [Zea mays]
Length = 322
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 117/241 (48%), Positives = 163/241 (67%), Gaps = 9/241 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY NNCP ++CV LGRFSFQP +N LFGPS+ATL K+G L VV+ + +
Sbjct: 54 MYANNCPAR-DTNKCVAR-FLGRFSFQPLRQNPLFGPSSATLTKMGALVWEKVVHRHQGW 111
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R S MWLHA VIHL+ N L +LFIG++LE+ FG++RIG +YVLSG GG +LS L
Sbjct: 112 RLLSSMWLHAGVIHLVANMLCLLFIGMRLEQQFGYVRIGAIYVLSGVGGAVLSSLVVRN- 170
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
+++VGASGAL GLLGA LSE++TNWT+YTNK ++ L+ V VN+ +G +P +DN
Sbjct: 171 ----RVTVGASGALLGLLGAMLSELLTNWTIYTNKAAAVATLLSVAAVNLVLGVLPHVDN 226
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLF 240
+AH+GGF+AG LLGF++L+RP G++ + G + KY +Q L +++++L
Sbjct: 227 LAHLGGFLAGFLLGFVVLMRPHLGWMERYGLPAGAPCTAR--KYLAYQWTLLAVAIIILL 284
Query: 241 V 241
V
Sbjct: 285 V 285
>gi|168027788|ref|XP_001766411.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682320|gb|EDQ68739.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 121/241 (50%), Positives = 167/241 (69%), Gaps = 9/241 (3%)
Query: 1 MYVNNCPKNL-GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MY NNCP N+ DRCV R SFQP ++N L GPS+ATL+++GGL LVV +
Sbjct: 36 MYDNNCPANIIPPDRCVL-GSFRRMSFQPWNQNPLLGPSSATLQRMGGLMTFLVVDQQQG 94
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R SC+WLHA V HL+ N A+L G++LE++FG +R+GLLY++SG GGGLLS L
Sbjct: 95 WRLMSCVWLHAGVFHLVINMTALLIFGIQLEKEFGIIRVGLLYLISGLGGGLLSTLFNSH 154
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+ ISVGASGALFGL GA+L+E+ITNW+ + N+C LI+V VN +IG MP +D
Sbjct: 155 A-----ISVGASGALFGLAGATLAELITNWSHFHNRCSLTWQLIIVAAVNFSIGLMPRVD 209
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYV-SGPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
N AHIGGF+ G+LLGF+LL++ QYGYV + P E K+ +++ +Q +L+V S+++
Sbjct: 210 NFAHIGGFITGLLLGFVLLMKEQYGYVWQRDLVDPNIERPMKR-RFKVYQIVLFVASILL 268
Query: 239 L 239
L
Sbjct: 269 L 269
>gi|22122915|gb|AAM92298.1| putative membrane protein [Oryza sativa Japonica Group]
Length = 329
Score = 199 bits (506), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 109/244 (44%), Positives = 156/244 (63%), Gaps = 16/244 (6%)
Query: 1 MYVNNCPKNLGED-RCVFHDHLGRFSFQPRSENSLFGPSTATL--KKLGGLSRNLVVYDG 57
MYVNNCP + CV R SL P+ L K+G L + VV++
Sbjct: 62 MYVNNCPSHASRGGACV------RIPPPLLLPASLREPAPRPLLRHKMGALVWDKVVHEH 115
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +R +C+WLHA V+HLL N L+++ IG++LE+ FG++RIG++Y++SG GG +LS L
Sbjct: 116 QGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGIIYLVSGIGGSVLSSLFI 175
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S ISVGASGALFGLLGA LSE+ TNWT+YTNK ++ L++VI +N+AIG +P
Sbjct: 176 RNS-----ISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTLLIVIAINLAIGILPH 230
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
+DN AHIGGF+ G LLGFI L+RP YG++ Y+ P + + KY +Q +L ++ V
Sbjct: 231 VDNFAHIGGFLTGFLLGFIFLMRPHYGWMQ-RYVLPS-SVKYTSKKYLAYQWILLAVASV 288
Query: 238 VLFV 241
+ +
Sbjct: 289 LAVI 292
>gi|15236387|ref|NP_194038.1| RHOMBOID-like protein 7 [Arabidopsis thaliana]
gi|3292833|emb|CAA19823.1| putative membrane protein [Arabidopsis thaliana]
gi|7269154|emb|CAB79262.1| putative membrane protein [Arabidopsis thaliana]
gi|332659302|gb|AEE84702.1| RHOMBOID-like protein 7 [Arabidopsis thaliana]
Length = 313
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/239 (47%), Positives = 163/239 (68%), Gaps = 12/239 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY N+CP RC+ LGRFSF+ N L GPS++TL+K+G L+ +V+ +++
Sbjct: 49 MYYNDCPHK--SHRCL-AKFLGRFSFESFKSNPLLGPSSSTLEKMGALAWGKIVHKRQVW 105
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +CMWLHA VIHLL N + +IGV+LE+ FGF+R+G +Y++SGF G +LSCL +++
Sbjct: 106 RLLTCMWLHAGVIHLLANMCCVAYIGVRLEQQFGFVRVGTIYLVSGFCGSILSCLFLEDA 165
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGAS ALFGLLGA LSE++ NWT Y NK V+I ML++++GVN+ +G +P +DN
Sbjct: 166 -----ISVGASSALFGLLGAMLSELLINWTTYDNKGVAIVMLLVIVGVNLGLGTLPPVDN 220
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPY-IAPGYELNHKKPKYQCHQKLLWVISVVV 238
AHIGGF G LLGF+LL+ PQ+ + + PG + KPKY Q +L +++ +V
Sbjct: 221 FAHIGGFFGGFLLGFLLLIHPQFEWEENQVSLMPGTIV---KPKYNTCQLVLCIVASIV 276
>gi|297799698|ref|XP_002867733.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297313569|gb|EFH43992.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 318
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 115/239 (48%), Positives = 162/239 (67%), Gaps = 12/239 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY N+CP C+ LGRFSF+ N L GPS++TL+K+G L+ +V+ +++
Sbjct: 54 MYFNDCPHK--SHHCL-AKFLGRFSFESFKSNPLLGPSSSTLEKMGALAWGKIVHKRQVW 110
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R F+CMWLHA VIHLL N + FIGV+LE+ FGF+R+G +Y++SGF G +LSCL +
Sbjct: 111 RLFTCMWLHAGVIHLLANMCCVAFIGVRLEQQFGFVRVGTIYLVSGFCGSILSCLFLQNA 170
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
ISVGAS ALFGLLGA LSE++ NWT Y NK V++ ML++++GVN+ +G +P +DN
Sbjct: 171 -----ISVGASSALFGLLGAMLSELLINWTTYDNKGVALVMLLVIVGVNLGLGTLPPVDN 225
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPY-IAPGYELNHKKPKYQCHQKLLWVISVVV 238
AHIGGF+ G LLGF+LL+ PQ+ + + PG + KPKY Q +L +I+ +V
Sbjct: 226 FAHIGGFLGGFLLGFLLLIHPQFEWEENRVSLMPGTIV---KPKYNTCQLVLCIIASIV 281
>gi|18409916|ref|NP_566989.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
gi|119360121|gb|ABL66789.1| At3g53780 [Arabidopsis thaliana]
gi|332645621|gb|AEE79142.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
Length = 270
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 137/195 (70%), Gaps = 10/195 (5%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
+GGL VV E +R SC WLH V+HLL N L +LFIG+++E +FGF+RIGLLY++
Sbjct: 1 MGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGLLYLI 60
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SGFGG +LS L + ISVGASGA+FGLLG LSEI NWT+Y+NK V+I L+L
Sbjct: 61 SGFGGSILSALFLRSN-----ISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVL 115
Query: 165 VIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKY 224
++ VN+ +G +PG+DN AHIGGF G LLGF+LL+RP YG+++ PG K ++
Sbjct: 116 IVAVNLGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWIN-QRNGPG----AKPHRF 170
Query: 225 QCHQKLLWVISVVVL 239
+ +Q +LW IS+++L
Sbjct: 171 KIYQGILWTISLLIL 185
>gi|125575434|gb|EAZ16718.1| hypothetical protein OsJ_32194 [Oryza sativa Japonica Group]
Length = 253
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/200 (48%), Positives = 142/200 (71%), Gaps = 7/200 (3%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L+K+G L + VV++ + +R +C+WLHA V+HLL N L+++ IG++LE+ FG++RIG++
Sbjct: 24 LQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGII 83
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y++SG GG +LS L S ISVGASGALFGLLGA LSE+ TNWT+YTNK ++
Sbjct: 84 YLVSGIGGSVLSSLFIRNS-----ISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVT 138
Query: 162 LILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
L++VI +N+AIG +P +DN AHIGGF+ G LLGFI L+RP YG++ Y+ P + +
Sbjct: 139 LLIVIAINLAIGILPHVDNFAHIGGFLTGFLLGFIFLMRPHYGWMQ-RYVLPS-SVKYTS 196
Query: 222 PKYQCHQKLLWVISVVVLFV 241
KY +Q +L ++ V+ +
Sbjct: 197 KKYLAYQWILLAVASVLAVI 216
>gi|255537321|ref|XP_002509727.1| conserved hypothetical protein [Ricinus communis]
gi|223549626|gb|EEF51114.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/241 (43%), Positives = 150/241 (62%), Gaps = 37/241 (15%)
Query: 1 MYVNNCPKN-LG-EDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGE 58
MYVNNCPKN LG E CV LGR SFQP EN LFGPS++TL+ +G L N VV+ +
Sbjct: 53 MYVNNCPKNNLGFEGNCV-AKFLGRLSFQPLKENPLFGPSSSTLENMGALEWNKVVHGHQ 111
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
+R +CMWLHA V+HLL N L+++FIG++LE+ FGF+R+GL+Y+L+GFGG +LS L
Sbjct: 112 GWRLITCMWLHAGVVHLLANMLSLIFIGIRLEQQFGFVRVGLIYLLAGFGGSILSALFIQ 171
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
+ ISVGAS L L+++I +N+A+G +P +
Sbjct: 172 RN-----ISVGASALL--------------------------TLVIIIAINLAVGILPHV 200
Query: 179 DNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
DN AHIGGF+ G LGF++LLRPQ+G+ ++ + K +++ +Q +I+VV+
Sbjct: 201 DNFAHIGGFLTGFFLGFVILLRPQFGWYESRHLPADARV---KSRHKAYQYAFLLIAVVL 257
Query: 239 L 239
L
Sbjct: 258 L 258
>gi|302782782|ref|XP_002973164.1| hypothetical protein SELMODRAFT_98870 [Selaginella moellendorffii]
gi|300158917|gb|EFJ25538.1| hypothetical protein SELMODRAFT_98870 [Selaginella moellendorffii]
Length = 286
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 110/238 (46%), Positives = 156/238 (65%), Gaps = 13/238 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY N+CP + E RC+ L RFSFQP S+N L GPS+ TL ++G L LV E +
Sbjct: 23 MYRNDCPAHQTEYRCILPG-LKRFSFQPLSQNPLLGPSSNTLLRMGALESELVTSGREGW 81
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA V HLL N L +L +G+++E++FGFL++G +Y+++GFGG LLS L
Sbjct: 82 RLVSCIWLHAGVFHLLLNMLGLLTLGLQMEQEFGFLKLGFVYLIAGFGGSLLSALFLR-- 139
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
L ISVGASGALFGL+GA LSE++ NW+ + +++ L+++ +N+A+G MP +DN
Sbjct: 140 ---LTISVGASGALFGLMGALLSELLINWSHHERSWFTLSQLVVLFIINLALGKMPHVDN 196
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSG---PYIAPGYELN-HKKPKYQCHQKLLWVI 234
AH+GG ++GILLGFILL RP + + PY P + PKY+ ++WVI
Sbjct: 197 YAHLGGCISGILLGFILLQRPPLTWPTQPHLPYQPPSRPWRIYSLPKYKF---VIWVI 251
>gi|195622898|gb|ACG33279.1| membrane protein [Zea mays]
Length = 226
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/186 (51%), Positives = 132/186 (70%), Gaps = 12/186 (6%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
+G L N +V+ + +R SC+WLHA +IHL+ N L++LFIG++LE+ FGF+RIG +Y+L
Sbjct: 1 MGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVRIGAIYLL 60
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SGFGG +LS L S ISVGASGALFGLLG+ LSE++ NWT+Y+NK +I L+
Sbjct: 61 SGFGGSVLSALFLRNSY----ISVGASGALFGLLGSMLSELLMNWTIYSNKAAAIITLLF 116
Query: 165 VIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNH--KKP 222
+I +N+AIG +P +DN AHIGGF G LLGF+LL RPQ+ ++ +EL H + P
Sbjct: 117 IIALNLAIGILPHVDNFAHIGGFATGFLLGFVLLARPQFSWME------SHELPHTNQPP 170
Query: 223 KYQCHQ 228
KY+ +Q
Sbjct: 171 KYKAYQ 176
>gi|110289433|gb|ABG66197.1| Rhomboid family protein, expressed [Oryza sativa Japonica Group]
gi|215686404|dbj|BAG87689.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 227
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 138/194 (71%), Gaps = 7/194 (3%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
+G L + VV++ + +R +C+WLHA V+HLL N L+++ IG++LE+ FG++RIG++Y++
Sbjct: 1 MGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGIIYLV 60
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SG GG +LS L S ISVGASGALFGLLGA LSE+ TNWT+YTNK ++ L++
Sbjct: 61 SGIGGSVLSSLFIRNS-----ISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTLLI 115
Query: 165 VIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKY 224
VI +N+AIG +P +DN AHIGGF+ G LLGFI L+RP YG++ Y+ P + + KY
Sbjct: 116 VIAINLAIGILPHVDNFAHIGGFLTGFLLGFIFLMRPHYGWMQ-RYVLPS-SVKYTSKKY 173
Query: 225 QCHQKLLWVISVVV 238
+Q +L ++ V+
Sbjct: 174 LAYQWILLAVASVL 187
>gi|168067654|ref|XP_001785725.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662631|gb|EDQ49460.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 321
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 161/241 (66%), Gaps = 8/241 (3%)
Query: 1 MYVNNCPKNLGEDR-CVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MY NNCP +G R CV R SFQP SEN L GPS+ATL K+GGL LVV E
Sbjct: 48 MYENNCPAKIGPGRTCVLGSSFKRMSFQPWSENPLLGPSSATLVKMGGLRTVLVVDQKEG 107
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R SC+WLHA V HLL N +A+L +G+ LE+ FGF+R+G+LY+ SG GG LLS L
Sbjct: 108 WRLMSCVWLHAGVFHLLVNMIAVLVLGLPLEKTFGFIRVGVLYLASGLGGSLLSSLFNQN 167
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+SVGASGALFGLLG ++S++I NW+LY+N C + LI++ +N+AIG +P +D
Sbjct: 168 G-----VSVGASGALFGLLGGTISDVIINWSLYSNYCGVLLNLIILAAINLAIGLLPLVD 222
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVS-GPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
N AHIGGF+ G+LLG +LL++ Q+GYV + P E K ++ Q +L++IS +V
Sbjct: 223 NFAHIGGFLTGLLLGCVLLMKTQHGYVPRRDLLDPNMERPVKN-RFNAFQIILFIISALV 281
Query: 239 L 239
L
Sbjct: 282 L 282
>gi|356547428|ref|XP_003542114.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1-like
[Glycine max]
Length = 258
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/226 (47%), Positives = 145/226 (64%), Gaps = 29/226 (12%)
Query: 28 PRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGV 87
P +S +G L+ LG L +NLV E +RFFSCM+LHA V+HLL N +LFIG+
Sbjct: 2 PTIHSSFWG--YCRLRPLGALEKNLVEDQNEGWRFFSCMFLHAGVVHLLANMFGLLFIGI 59
Query: 88 KLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIIT 147
+LE++FGFL+IG L +LS FGG LLS LH ES + +SV AS ALFGLLGA LSE++T
Sbjct: 60 RLEKEFGFLKIGFLCMLSDFGGSLLSFLHLQESGVS-TVSVDASSALFGLLGAMLSELLT 118
Query: 148 NWTLYTNKCVSITMLILV------------IGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
NW++Y NKC+ + IL +G+N+A+GF+P +DN AHIGG +AG LGF
Sbjct: 119 NWSIYANKCLFVKRQILTHAYFSVLLLLIIVGLNLAVGFLPRVDNSAHIGGLLAGYFLGF 178
Query: 196 ILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLFV 241
ILL+RPQY YV+ KY+ +Q ++SV++L +
Sbjct: 179 ILLMRPQYXYVNX--------------KYKWYQYFFLIMSVIILLL 210
>gi|414867424|tpg|DAA45981.1| TPA: hypothetical protein ZEAMMB73_979905 [Zea mays]
Length = 254
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 138/197 (70%), Gaps = 7/197 (3%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L+KLG L + VV + + +R +C+WLHA V HLL N ++++ IG++LE+ FG++R+G++
Sbjct: 19 LQKLGALVWDKVVREHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGII 78
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y++SG GG +LS L + ISVGASGALFGLLGA LSE+ TNWT+Y NK ++
Sbjct: 79 YLVSGVGGSVLSSLFIRNN-----ISVGASGALFGLLGAMLSELFTNWTIYANKAAALVT 133
Query: 162 LILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
L++VI +N+AIG +P +DN AHIGGF+ G LLGF+LL+RP YG++ Y P ++ +
Sbjct: 134 LLVVIAINLAIGILPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWMQ-RYALPS-DVKYTT 191
Query: 222 PKYQCHQKLLWVISVVV 238
KY +Q L ++ V+
Sbjct: 192 KKYLAYQWALLAVASVL 208
>gi|212722852|ref|NP_001132594.1| uncharacterized protein LOC100194066 [Zea mays]
gi|194694850|gb|ACF81509.1| unknown [Zea mays]
Length = 248
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 138/197 (70%), Gaps = 7/197 (3%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L+KLG L + VV + + +R +C+WLHA V HLL N ++++ IG++LE+ FG++R+G++
Sbjct: 19 LQKLGALVWDKVVREHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGII 78
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y++SG GG +LS L + ISVGASGALFGLLGA LSE+ TNWT+Y NK ++
Sbjct: 79 YLVSGVGGSVLSSLFIRNN-----ISVGASGALFGLLGAMLSELFTNWTIYANKAAALVT 133
Query: 162 LILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
L++VI +N+AIG +P +DN AHIGGF+ G LLGF+LL+RP YG++ Y P ++ +
Sbjct: 134 LLVVIAINLAIGILPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWMQ-RYALPS-DVKYTT 191
Query: 222 PKYQCHQKLLWVISVVV 238
KY +Q L ++ V+
Sbjct: 192 KKYLAYQWALLAVASVL 208
>gi|222629393|gb|EEE61525.1| hypothetical protein OsJ_15827 [Oryza sativa Japonica Group]
Length = 301
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 143/231 (61%), Gaps = 18/231 (7%)
Query: 17 FHDHLGRFSFQPRSENSLFG------PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHA 70
++D G P G P + L+K G L VV+ + +R + WLHA
Sbjct: 46 YYDQAGGAGAAPPDVGGAAGGDSPTWPCSWWLRKYGALDWYGVVHGNQAWRLETSTWLHA 105
Query: 71 NVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGA 130
+IHL N +++L IG++LE+ FGF ++GL+Y++SGFGG +LS L + I+VGA
Sbjct: 106 GLIHLAANMISLLIIGIRLEQQFGFWKVGLVYLVSGFGGSVLSVLFISRNG----ITVGA 161
Query: 131 SGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAG 190
SGALFGLLGA LSE+ITNWT+Y+N+C ++ LI++ +N+A+G +P +DN AHIGGF G
Sbjct: 162 SGALFGLLGAMLSELITNWTIYSNRCAAMVNLIIIAAINLALGILPRVDNFAHIGGFATG 221
Query: 191 ILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLFV 241
LLGF+LL++PQ+G+ +++ K KY Q +L +SV +L
Sbjct: 222 FLLGFVLLIQPQFGWSE--------QVSSAKSKYNAFQIILLTLSVALLIA 264
>gi|302141893|emb|CBI19096.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 141/202 (69%), Gaps = 7/202 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M+VN+C +N D + LGR SFQP EN L GPS++TL ++G L + + + +
Sbjct: 61 MFVNDCWQNSHRDCAI--KVLGRLSFQPLWENPLLGPSSSTLDEMGALQQTFLANHHQTW 118
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R F+C+WLHA IHL+ N +++F+G+ LE++FG LRIG++Y+LS F G L++ L +S
Sbjct: 119 RLFTCLWLHAGAIHLIINLSSVIFVGIHLEQEFGPLRIGMVYILSAFFGSLVATLFLQKS 178
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
+VG+SGALFGLLG+ LS +I NW +YT+K +++ L+LV +N A+G +P +DN
Sbjct: 179 P-----AVGSSGALFGLLGSMLSGLICNWKVYTDKLAALSALLLVAVINFALGLLPYVDN 233
Query: 181 MAHIGGFVAGILLGFILLLRPQ 202
+++GGF++G+LLGF+LL P+
Sbjct: 234 FSNLGGFISGVLLGFVLLFSPR 255
>gi|357142172|ref|XP_003572482.1| PREDICTED: uncharacterized protein LOC100827999 [Brachypodium
distachyon]
Length = 364
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/243 (41%), Positives = 144/243 (59%), Gaps = 13/243 (5%)
Query: 1 MYVNNCPKNL-GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEI 59
MYVN+CP N G GR SFQP EN L GPS ATL+K+G L VV+ +I
Sbjct: 95 MYVNDCPGNTPGAAASCVAAGFGRVSFQPIHENPLLGPSYATLEKMGALDWAKVVHGHQI 154
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
R F+C W+HA +IHL L++ GV+ E+ FGFLRI ++Y+LSG GG +LS L
Sbjct: 155 SRLFTCFWVHAGLIHLFVTQLSLCSFGVRFEQQFGFLRIVIIYLLSGLGGSVLSALFLPA 214
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+SVGASG + GL+GA +SEI NW Y+N+ ++ +L L+ +NM +G P D
Sbjct: 215 G----SVSVGASGPVLGLIGAMVSEIAINWNAYSNRKPALAILGLIAVINMVMGIFPHTD 270
Query: 180 NMAHIGGFVAGILLGFILLLRP-QYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
N +IGGF+ G LLGF++L P + G++ ++PKY+ + ++ S+++
Sbjct: 271 NFTNIGGFLTGFLLGFLVLADPARIGFLP-------QSRTSEQPKYKSYHYAVFGASLLL 323
Query: 239 LFV 241
L V
Sbjct: 324 LLV 326
>gi|356575935|ref|XP_003556091.1| PREDICTED: inactive rhomboid protein 1-like isoform 2 [Glycine max]
Length = 282
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 138/209 (66%), Gaps = 10/209 (4%)
Query: 1 MYVNNCPKN--LGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGE 58
MY+NNCP+N + RCV LGRFSFQP EN L GPS++TL K+G L + VV +
Sbjct: 57 MYINNCPRNNLRFQGRCVAR-FLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVVNRHQ 115
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
+R F+C+WLHA VIHLL N L+++FIG++LE+ FGF++IG++Y++SGFGG +LS L
Sbjct: 116 GWRLFTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVLSSLFIR 175
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP-- 176
+ ISVGASGALFGLLGA LSE+ITNWT+Y+NK + L GV M +
Sbjct: 176 D-----HISVGASGALFGLLGAMLSELITNWTIYSNKFSWLEQRRLPAGVGMKSKYKAYQ 230
Query: 177 GIDNMAHIGGFVAGILLGFILLLRPQYGY 205
+ + + +AG+ ++L R + GY
Sbjct: 231 YVLWIVSLILLIAGLSTALVMLFRGEKGY 259
>gi|359492423|ref|XP_002284303.2| PREDICTED: uncharacterized rhomboid protein AN10929-like [Vitis
vinifera]
Length = 379
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 141/202 (69%), Gaps = 7/202 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M+VN+C +N D + LGR SFQP EN L GPS++TL ++G L + + + +
Sbjct: 61 MFVNDCWQNSHRDCAI--KVLGRLSFQPLWENPLLGPSSSTLDEMGALQQTFLANHHQTW 118
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R F+C+WLHA IHL+ N +++F+G+ LE++FG LRIG++Y+LS F G L++ L +S
Sbjct: 119 RLFTCLWLHAGAIHLIINLSSVIFVGIHLEQEFGPLRIGMVYILSAFFGSLVATLFLQKS 178
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
+VG+SGALFGLLG+ LS +I NW +YT+K +++ L+LV +N A+G +P +DN
Sbjct: 179 P-----AVGSSGALFGLLGSMLSGLICNWKVYTDKLAALSALLLVAVINFALGLLPYVDN 233
Query: 181 MAHIGGFVAGILLGFILLLRPQ 202
+++GGF++G+LLGF+LL P+
Sbjct: 234 FSNLGGFISGVLLGFVLLFSPR 255
>gi|356559855|ref|XP_003548212.1| PREDICTED: inactive rhomboid protein 1-like isoform 2 [Glycine max]
Length = 282
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/243 (43%), Positives = 140/243 (57%), Gaps = 58/243 (23%)
Query: 1 MYVNNCP-KNLG-EDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGE 58
MY+N+CP KNLG E CV LGRFSFQP EN LFGPS++TL K+G L + VV +
Sbjct: 58 MYLNDCPRKNLGFEGECVAR-FLGRFSFQPLRENPLFGPSSSTLTKMGALRWDDVVNHHQ 116
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
+R +C+WLHA V+HL N L+++FIG++LE+ FGF+RIG++Y+LSGFGG +LS L
Sbjct: 117 AWRLVTCIWLHAGVVHLAANMLSLVFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSSLFIR 176
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
+ ISVGASGALFGLLGA LSE+ITNW++YTNK
Sbjct: 177 NN-----ISVGASGALFGLLGAMLSELITNWSIYTNK----------------------- 208
Query: 179 DNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVV 238
G++ RP G K KY+ +Q +LW++S ++
Sbjct: 209 --------------FGWLEQRRPPAGV-------------RLKSKYKAYQYVLWIVSAIL 241
Query: 239 LFV 241
L V
Sbjct: 242 LIV 244
>gi|225455418|ref|XP_002279126.1| PREDICTED: inactive rhomboid protein 1 isoform 2 [Vitis vinifera]
Length = 278
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 90/157 (57%), Positives = 115/157 (73%), Gaps = 8/157 (5%)
Query: 1 MYVNNCPKNLG--EDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGE 58
MY+NNCPK + +CV LGRFSFQP EN LFGPS+ TL+KLG L VV +
Sbjct: 52 MYINNCPKENSRVQGKCV-AGFLGRFSFQPLKENPLFGPSSKTLEKLGALEWKKVVSKHQ 110
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
+R +C+WLHA +IHLL N L+++ IG++LE+ FGF+RIG++Y+LSGFGG +LS L
Sbjct: 111 GWRLVTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGFVRIGVIYLLSGFGGSVLSSLFIQ 170
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK 155
S ISVGASGALFGLLGA LSE+ITNW++YTN+
Sbjct: 171 NS-----ISVGASGALFGLLGAMLSELITNWSMYTNR 202
>gi|449522305|ref|XP_004168167.1| PREDICTED: inactive rhomboid protein 1-like, partial [Cucumis
sativus]
Length = 380
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 152/246 (61%), Gaps = 19/246 (7%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M VN+C N +D C F LGR SFQP +EN L GPS +TL+K+GGL R + +I+
Sbjct: 80 MLVNDCWSNSHQD-CAF-GVLGRMSFQPLAENPLLGPSASTLEKMGGLQRKSLTEYRQIW 137
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R F+ +HA +IHL+ N +++F+G++LE ++G +R G++Y+LS + G L++ L S
Sbjct: 138 RLFTFPCMHAGLIHLVINLGSVIFVGIQLELEYGPVRTGIIYLLSAYTGTLVAALFAQNS 197
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
SVG+SGALFGLLGA +S II NW LYT++ +++ ++ V +N +G +P IDN
Sbjct: 198 P-----SVGSSGALFGLLGAMISGIIRNWKLYTDRFLALGSVLAVFAINFGLGLLPYIDN 252
Query: 181 MAHIGGFVAGILLGFILLL----RPQYGYVSGPYIAPGY------ELNHK--KPKYQCHQ 228
A++GG VAG+LLGFI+L R + G ++ G+ E+ K KP +C
Sbjct: 253 FANVGGLVAGVLLGFIILFTLQDRQEKAQTKGYSLSYGFKNYFNLEMKQKLDKPILRCTS 312
Query: 229 KLLWVI 234
L+ +
Sbjct: 313 LFLFAL 318
>gi|449466454|ref|XP_004150941.1| PREDICTED: inactive rhomboid protein 1-like, partial [Cucumis
sativus]
Length = 374
Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 100/246 (40%), Positives = 152/246 (61%), Gaps = 19/246 (7%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M VN+C N +D C F LGR SFQP +EN L GPS +TL+K+GGL R + +I+
Sbjct: 53 MLVNDCWSNSHQD-CAF-GVLGRMSFQPLAENPLLGPSASTLEKMGGLQRKSLTEYRQIW 110
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R F+ +HA +IHL+ N +++F+G++LE ++G +R G++Y+LS + G L++ L S
Sbjct: 111 RLFTFPCMHAGLIHLVINLGSVIFVGIQLELEYGPVRTGIIYLLSAYTGTLVAALFAQNS 170
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
SVG+SGALFGLLGA +S II NW LYT++ +++ ++ V +N +G +P IDN
Sbjct: 171 P-----SVGSSGALFGLLGAMISGIIRNWKLYTDRFLALGSVLAVFAINFGLGLLPYIDN 225
Query: 181 MAHIGGFVAGILLGFILLL----RPQYGYVSGPYIAPGY------ELNHK--KPKYQCHQ 228
A++GG VAG+LLGFI+L R + G ++ G+ E+ K KP +C
Sbjct: 226 FANVGGLVAGVLLGFIILFTLQDRQEKAQTKGYSLSYGFKNYFNLEMKQKLDKPILRCTS 285
Query: 229 KLLWVI 234
L+ +
Sbjct: 286 LFLFAL 291
>gi|255545576|ref|XP_002513848.1| KOM, putative [Ricinus communis]
gi|223546934|gb|EEF48431.1| KOM, putative [Ricinus communis]
Length = 389
Score = 172 bits (437), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 130/202 (64%), Gaps = 8/202 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M VN+C N D + LGR SFQP SEN L GPS +TL K+G L R LV+ + + +
Sbjct: 72 MIVNDCSTNSYGDCAI--KTLGRLSFQPLSENPLLGPSASTLDKMGALRRTLVI-EHQTW 128
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R FSC WLHA +IHL+ + + ++F+G+ LE++FG LR+G++Y+LS F G L++ L +S
Sbjct: 129 RLFSCPWLHAGLIHLIIDLIGVIFLGIYLEQEFGPLRVGIIYILSAFFGSLVTALFVRDS 188
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
V +SGA GLLGA+ S ++ NW +TNK ++ + V N+ +G +P DN
Sbjct: 189 P-----VVSSSGAQLGLLGATFSALVRNWKSHTNKVAAVLIHFFVFACNVMLGLLPYADN 243
Query: 181 MAHIGGFVAGILLGFILLLRPQ 202
++IGG ++G LLGF+LL PQ
Sbjct: 244 YSNIGGLISGFLLGFVLLYTPQ 265
>gi|297842567|ref|XP_002889165.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335006|gb|EFH65424.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 351
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/242 (39%), Positives = 144/242 (59%), Gaps = 10/242 (4%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M VN+C +N C LGRFSFQP SEN + GPS +TL+ +GGLS N + + EI+
Sbjct: 66 MGVNDCSRN-SHGHCA-AKLLGRFSFQPLSENPMLGPSASTLEHMGGLSWNTLTENHEIW 123
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R + WLH+ + HL N +++F+G+ +E+ FG LRI ++Y+LSG G L + L
Sbjct: 124 RILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIYLLSGIMGSLFAVLFVRNI 183
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
S+ + A FGL+GA LS + NW LYT K ++ ++ + VN+ IGF+P IDN
Sbjct: 184 S-----SISSGAAFFGLIGAMLSALAKNWNLYTGKISALVIIFTIFTVNILIGFLPFIDN 238
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKP---KYQCHQKLLWVISVV 237
A+IGGF++G LLGF+LL +PQ + + +E + + K Q + +L +I +V
Sbjct: 239 FANIGGFISGFLLGFVLLFKPQLRQMPPSHKGKLFEDDTNRSTRLKDQFDRPVLRIICLV 298
Query: 238 VL 239
V
Sbjct: 299 VF 300
>gi|225426830|ref|XP_002283280.1| PREDICTED: inactive rhomboid protein 1 isoform 2 [Vitis vinifera]
Length = 281
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/153 (58%), Positives = 114/153 (74%), Gaps = 6/153 (3%)
Query: 4 NNCPK-NLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRF 62
N+CPK N G + L R SFQP EN LFGPS++TL+KLGGL N VVY + +R
Sbjct: 61 NDCPKKNTGIEGACVAKFLRRLSFQPLRENPLFGPSSSTLEKLGGLEWNKVVYGDQGWRL 120
Query: 63 FSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQ 122
+C+WLHA VIHLL N L+++FIG++LE+ FGF+RIG++Y++SGFGG +LS L +
Sbjct: 121 VTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRIGIIYLVSGFGGSILSSLFIQHN-- 178
Query: 123 TLQISVGASGALFGLLGASLSEIITNWTLYTNK 155
ISVGASGALFGLLGA LSE+ITNW++YTNK
Sbjct: 179 ---ISVGASGALFGLLGAMLSELITNWSIYTNK 208
>gi|255586755|ref|XP_002533997.1| KOM, putative [Ricinus communis]
gi|223526008|gb|EEF28386.1| KOM, putative [Ricinus communis]
Length = 229
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/144 (55%), Positives = 112/144 (77%), Gaps = 5/144 (3%)
Query: 96 LRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK 155
++IGLLYV+SGFGG L+S L + ISVGASGALFGLLGA LSE+ITNWT+YTNK
Sbjct: 6 VKIGLLYVISGFGGSLMSSLFIQTN-----ISVGASGALFGLLGAMLSELITNWTIYTNK 60
Query: 156 CVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGY 215
+ L+++I +N+A+G +P +DN AHIGGF++G LLGF+ L+RPQ+G+VS Y+ PGY
Sbjct: 61 VAAFVTLLIIIAINLAVGILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQRYVPPGY 120
Query: 216 ELNHKKPKYQCHQKLLWVISVVVL 239
KPK++ +Q++LW+IS++V+
Sbjct: 121 SPASVKPKFKAYQRILWIISLIVV 144
>gi|356518507|ref|XP_003527920.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 373
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 129/207 (62%), Gaps = 7/207 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M VN+C N D CV LGRFSFQP EN L GPS + L ++G L R+L+ + +
Sbjct: 54 MLVNDCWNNSHGD-CVLQA-LGRFSFQPLPENPLLGPSQSKLDEMGALRRSLLTEHHQTW 111
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R F+ +LHA V HLL N +++++GV LE FG +RIG++Y LS F G L++ L
Sbjct: 112 RLFTFPFLHAGVFHLLLNLSSVIYVGVSLEHHFGPIRIGIIYALSAFVGSLVASLFLQNM 171
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
+VGASGAL+GLLG LSE++ NW ++NK +I L+ V N +GF+P +DN
Sbjct: 172 P-----AVGASGALYGLLGTLLSELVWNWKFHSNKISAIASLVFVFVCNFVLGFLPYVDN 226
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVS 207
A IGGF++G LLG + LL PQ V+
Sbjct: 227 FASIGGFISGFLLGSVFLLSPQLQPVA 253
>gi|414886371|tpg|DAA62385.1| TPA: hypothetical protein ZEAMMB73_763535 [Zea mays]
Length = 211
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 112/156 (71%), Gaps = 4/156 (2%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY NNCPK+ + L RFSFQP EN L GPS++TL+K+G L N +V+ + +
Sbjct: 55 MYENNCPKHGSQLGDCVAGFLRRFSFQPLRENPLLGPSSSTLEKMGALDWNKIVHQNQGW 114
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R SC+WLHA +IHL+ N L++LFIG++LE+ FGF+RIG +Y+LSGFGG +LS L S
Sbjct: 115 RLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVRIGAIYLLSGFGGSVLSALFLRNS 174
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
ISVGASGALFGLLG+ LSE++ NWT+Y+NK
Sbjct: 175 ----YISVGASGALFGLLGSMLSELLMNWTIYSNKA 206
>gi|168024910|ref|XP_001764978.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683787|gb|EDQ70194.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 383
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/246 (38%), Positives = 145/246 (58%), Gaps = 13/246 (5%)
Query: 1 MYVNNCPK---NLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDG 57
M NNC + N GE+ C+F + + RF FQP SEN L GPS +L G L LV G
Sbjct: 56 MSHNNCDRKGSNGGENVCIF-NFVRRFPFQPLSENPLLGPSAISLLDFGALESELVGRAG 114
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E +R + + LHA + HL+ N + ++G++LE +FGFL++ L+Y L+GF G L S L
Sbjct: 115 EGWRMLTTLSLHAGIFHLVGNLAGLFYVGLQLEREFGFLKVMLIYYLAGFAGALASVLFM 174
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
++SVGASGA GL+GA L+E++ NW + ++ SI + + G +P
Sbjct: 175 HG-----RVSVGASGATMGLIGARLAEVVMNWNVSKHRTRSIVSTSFFLVGTLVYGLLPL 229
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG--YELNH--KKPKYQCHQKLLWV 233
+DN H+GGF+ G LLG +LL+RPQ +V+ P Y+++ + K+ QK+LW+
Sbjct: 230 MDNFMHLGGFLTGSLLGNVLLIRPQAEWVNYEQCFPAVVYDVDDLPARSKHSRGQKVLWI 289
Query: 234 ISVVVL 239
+S+ +L
Sbjct: 290 VSLNIL 295
>gi|356507686|ref|XP_003522595.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 368
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 128/207 (61%), Gaps = 7/207 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M VN+C N D CV LGRFSFQP EN L GPS + L ++G L NL+ + +
Sbjct: 49 MLVNDCWNNSHGD-CVLQP-LGRFSFQPLPENPLLGPSQSKLDEMGALRWNLLTEHHQTW 106
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R F+ +LHA + HLL N +++++GV LE FG +RIG++Y LS F G L++ L
Sbjct: 107 RLFTFPFLHAGLFHLLLNLSSVIYVGVNLEHHFGPIRIGIIYALSAFVGSLVASLFLQNI 166
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
+VGASGAL+GLLG LSE++ NW ++NK +I L+ V N +GF+P +DN
Sbjct: 167 P-----AVGASGALYGLLGTLLSELVWNWKFHSNKISAIASLVFVFVCNFVLGFLPYVDN 221
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVS 207
A +GGF++G LLG + LL PQ V+
Sbjct: 222 FASMGGFISGFLLGSVFLLCPQIQPVA 248
>gi|242072091|ref|XP_002451322.1| hypothetical protein SORBIDRAFT_05g027720 [Sorghum bicolor]
gi|241937165|gb|EES10310.1| hypothetical protein SORBIDRAFT_05g027720 [Sorghum bicolor]
Length = 292
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 142/212 (66%), Gaps = 20/212 (9%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
+G L VV+ + +R +CMWLHA V+HLL N L ++ IG++LE++FGF+RIGL+Y++
Sbjct: 1 MGALDVPKVVHGRQGWRLITCMWLHAGVVHLLINMLCLVIIGIRLEQEFGFVRIGLVYLI 60
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SGFGG L+S L + +SVGASGALFGL+G+ LSE+ITNW+LY NK ++ L+L
Sbjct: 61 SGFGGSLMSALFIQSN-----VSVGASGALFGLIGSMLSELITNWSLYANKVAALVTLVL 115
Query: 165 VIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG-PYIAPGYELNHK--- 220
VI VN+A+G +P +DN AHIGG ++G LLGF+ +RPQ+ +++ ++ + + +
Sbjct: 116 VIVVNLALGLLPRVDNFAHIGGLISGFLLGFVFFIRPQFAWLTQHRRVSAAAQPDGQPPA 175
Query: 221 -----------KPKYQCHQKLLWVISVVVLFV 241
K K++ +Q +LW+ + V+L V
Sbjct: 176 AAPTPPPVVSVKRKHKTYQYVLWLAAAVLLVV 207
>gi|54290319|dbj|BAD61123.1| putative membrane protein [Oryza sativa Japonica Group]
gi|54290396|dbj|BAD61266.1| putative membrane protein [Oryza sativa Japonica Group]
Length = 329
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 109/170 (64%), Gaps = 20/170 (11%)
Query: 1 MYVNNCPKNL---------------GEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKL 45
MY+N+CP ++ C LGRF+FQ EN L GPS+ATL K+
Sbjct: 89 MYINDCPAHMQATGDAIGGDVGEGAASQGCWLEPELGRFAFQSYKENPLIGPSSATLLKM 148
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
G L + V D E +R +C+WLHA V+H+L N L++L IG++LE++FGF+RIG LYV+S
Sbjct: 149 GALETSKVTNDHEGWRLITCIWLHAGVVHILANMLSLLLIGIRLEKEFGFMRIGTLYVIS 208
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK 155
G GG LLS L ISVGASGALFGLLG+ LSE+ITNWT+Y NK
Sbjct: 209 GVGGSLLSALF-----MVSNISVGASGALFGLLGSMLSELITNWTIYENK 253
>gi|145337690|ref|NP_177909.2| Rhomboid-related intramembrane serine protease family protein
[Arabidopsis thaliana]
gi|332197915|gb|AEE36036.1| Rhomboid-related intramembrane serine protease family protein
[Arabidopsis thaliana]
Length = 351
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 142/247 (57%), Gaps = 20/247 (8%)
Query: 1 MYVNNCPKNLGEDRCVFHDH-----LGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVY 55
M VN+C N H H LGRFSFQ SEN + GPS +TL+ +GGLS +
Sbjct: 66 MGVNDCSGNS-------HGHCSAKLLGRFSFQSLSENPMLGPSASTLEHMGGLSWKALTE 118
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
+ EI+R + WLH+ + HL N +++F+G+ +E+ FG LRI ++Y LSG G L + L
Sbjct: 119 NHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIYFLSGIMGSLFAVL 178
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM 175
+ IS GA A FGL+GA LS + NW LY +K ++ ++ + VN IGF+
Sbjct: 179 F---VRNIPSISSGA--AFFGLIGAMLSALAKNWNLYNSKISALAIIFTIFTVNFLIGFL 233
Query: 176 PGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKP---KYQCHQKLLW 232
P IDN A+IGGF++G LLGF+LL +PQ + + +E + + K Q + +L
Sbjct: 234 PFIDNFANIGGFISGFLLGFVLLFKPQLRQMPPSHKGKLFEDDMNRSTRLKEQFDRPVLR 293
Query: 233 VISVVVL 239
+I ++V
Sbjct: 294 IICLLVF 300
>gi|332148745|dbj|BAK20219.1| Rhomboid family KOMPEITO [Arabidopsis thaliana]
Length = 385
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 96/247 (38%), Positives = 142/247 (57%), Gaps = 20/247 (8%)
Query: 1 MYVNNCPKNLGEDRCVFHDH-----LGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVY 55
M VN+C N H H LGRFSFQ SEN + GPS +TL+ +GGLS +
Sbjct: 66 MGVNDCSGNS-------HGHCSAKLLGRFSFQSLSENPMLGPSASTLEHMGGLSWKALTE 118
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
+ EI+R + WLH+ + HL N +++F+G+ +E+ FG LRI ++Y LSG G L + L
Sbjct: 119 NHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIYFLSGIMGSLFAVL 178
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM 175
+ IS GA A FGL+GA LS + NW LY +K ++ ++ + VN IGF+
Sbjct: 179 F---VRNIPSISSGA--AFFGLIGAMLSALAKNWNLYNSKISALAIIFTIFTVNFLIGFL 233
Query: 176 PGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKP---KYQCHQKLLW 232
P IDN A+IGGF++G LLGF+LL +PQ + + +E + + K Q + +L
Sbjct: 234 PFIDNFANIGGFISGFLLGFVLLFKPQLRQMPPSHKGKLFEDDMNRSTRLKEQFDRPVLR 293
Query: 233 VISVVVL 239
+I ++V
Sbjct: 294 IICLLVF 300
>gi|125524408|gb|EAY72522.1| hypothetical protein OsI_00383 [Oryza sativa Indica Group]
Length = 265
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 119/163 (73%), Gaps = 5/163 (3%)
Query: 80 LAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLG 139
L++L IG++LE++FGF+RIG LYV+SG GG LLS L + ISVGASGALFGLLG
Sbjct: 2 LSLLLIGIRLEKEFGFMRIGTLYVISGVGGSLLSALFMVSN-----ISVGASGALFGLLG 56
Query: 140 ASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLL 199
+ LSE+ITNWT+Y NK ++ L+++I +N+A+G +P +DN AH+GGF +G LGF+LL+
Sbjct: 57 SMLSELITNWTIYENKFAALLTLVIIILINLAVGILPHVDNFAHLGGFTSGFFLGFVLLV 116
Query: 200 RPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLFVW 242
RPQ+GY++ G + K KY+ +Q +LWVI+ +++ W
Sbjct: 117 RPQFGYINQKNSPLGLPMGTTKSKYKTYQIILWVIATLIIDFW 159
>gi|186520951|ref|NP_001119182.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
gi|332003745|gb|AED91128.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
Length = 299
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 107/155 (69%), Gaps = 8/155 (5%)
Query: 4 NNCPKNLGEDRCVFH---DHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
NNCP + R H LGR SF+P N LFGPS+ TL+KLG L + VV E +
Sbjct: 76 NNCPNHFESHRLRGHCVAKFLGRLSFEPLRTNPLFGPSSHTLEKLGALEWSKVVEKKEGW 135
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R +C+WLHA VIHL N L+++FIG++LE+ FGF+RIG++Y+LSG GG +LS L S
Sbjct: 136 RLLTCIWLHAGVIHLGANMLSLVFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNS 195
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNK 155
ISVGASGALFGLLG+ LSE+ TNWT+Y+NK
Sbjct: 196 -----ISVGASGALFGLLGSMLSELFTNWTIYSNK 225
>gi|357461731|ref|XP_003601147.1| Rhomboid family member [Medicago truncatula]
gi|355490195|gb|AES71398.1| Rhomboid family member [Medicago truncatula]
Length = 332
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/241 (39%), Positives = 149/241 (61%), Gaps = 13/241 (5%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M VN+C N D C F LGRFSFQP +EN L GPS + L ++G L +N + + +
Sbjct: 13 MLVNDCFTNSHGD-CTF-PSLGRFSFQPLAENPLLGPSMSKLDEMGALQKNFLTERHQTW 70
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R F+ +LHA + HL+ N +++++G++LE++FG LRIG++Y+LS F G L++ L
Sbjct: 71 RLFTFPFLHAGLFHLVINLCSVIYVGIRLEQEFGPLRIGIVYILSAFVGALMASLF---- 126
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
Q + + VG+SGALFGLLGA LSE++ NW +T K + + + N +GF+P +DN
Sbjct: 127 LQNIPV-VGSSGALFGLLGALLSELVWNWKYHTKKISEVASFVFIFVCNFLLGFLPYVDN 185
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKY---QCHQKLLWVISVV 237
+ IGGF++G LLG +LL PQ+ V+ + G ++++ Y + QKL +S +
Sbjct: 186 FSSIGGFISGFLLGTVLLFAPQFQQVTP---SKGDQIDYDLKSYIKLKLKQKLDRPVSRI 242
Query: 238 V 238
V
Sbjct: 243 V 243
>gi|147766525|emb|CAN76609.1| hypothetical protein VITISV_039487 [Vitis vinifera]
Length = 448
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 128/202 (63%), Gaps = 24/202 (11%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M+VN+C +N D + LGR SFQP EN L GPS++TL ++G L + + + +
Sbjct: 61 MFVNDCWQNSHRDCAI--KVLGRLSFQPLWENPLLGPSSSTLDEMGALQQTFLANHHQTW 118
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R F+C+WLHA IHL+ N +++F+G+ LE++FG + L
Sbjct: 119 RLFTCLWLHAGAIHLIINLSSVIFVGIHLEQEFGPPXLFL-------------------- 158
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
Q++ +VG+SGALFGLLG+ LS +I NW +YT+K +++ L+LV +N A+G +P +DN
Sbjct: 159 QKS--PAVGSSGALFGLLGSMLSGLICNWKVYTDKLAALSALLLVAVINFALGLLPYVDN 216
Query: 181 MAHIGGFVAGILLGFILLLRPQ 202
+++GGF++G+LLGF+LL P+
Sbjct: 217 FSNLGGFISGVLLGFVLLFSPR 238
>gi|168001759|ref|XP_001753582.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695461|gb|EDQ81805.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 362
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 125/224 (55%), Gaps = 7/224 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M N+CPK++ + L SFQP EN + GP + K GG+ +LV E +
Sbjct: 79 MLYNDCPKHIAPGEKCVGEWLKPLSFQPWDENPMLGPRWRAIMKWGGVESSLVTKKKEGW 138
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R S + ++ V+ L+ N +A+L +G+++E F F ++G++Y +SGFGG +LS L
Sbjct: 139 RLLSSIAVNGGVLQLIMNLIALLIVGLRMELYFWFFKVGIIYTMSGFGGNVLSTLFIQN- 197
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
Q+ V AS AL GL+GAS ++I NW + K + LI+ ++ G MP +DN
Sbjct: 198 ----QLFVSASAALLGLIGASFADIFINWDVVERKALKFVDLIVFGLISFGFGLMPQVDN 253
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIA--PGYELNHKKP 222
A++GG G LGF+ LLRPQ GY +++ + +N++ P
Sbjct: 254 FANVGGLFTGFCLGFVFLLRPQRGYKDTRHLSQLEAFIVNNQDP 297
>gi|167999275|ref|XP_001752343.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696738|gb|EDQ83076.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 340
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 115/203 (56%), Gaps = 7/203 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M+ N+CP + + +F+ QP EN L GPS TL LG L +L+ E +
Sbjct: 22 MHQNDCPSH--TQTACLNPSFHKFAMQPFDENPLLGPSAKTLLSLGALESDLITKSREGW 79
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R S MWLHA V+H+ + +L +G+ LE GF+++G++Y+LSGF G ++S L
Sbjct: 80 RLLSAMWLHAGVLHIAGTASGMLLLGIPLERQLGFVKVGVVYILSGFLGSVISALMVHG- 138
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
++SVGASGA GLLGA+LS II NW Y ++ ++ ++ +N G MP DN
Sbjct: 139 ----RVSVGASGAFMGLLGATLSSIIVNWKSYRHRSRALMGVMFFTALNAVFGLMPLADN 194
Query: 181 MAHIGGFVAGILLGFILLLRPQY 203
HIGG V G L+G + ++ +
Sbjct: 195 FMHIGGAVMGFLIGNLFFIKQNF 217
>gi|168040858|ref|XP_001772910.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675821|gb|EDQ62312.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 123/206 (59%), Gaps = 7/206 (3%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY NNCP ++ R + SFQP EN + GP A + K GGL +LV G+ +
Sbjct: 79 MYYNNCPDHIQPGRKCVGAWMKPMSFQPWDENPMLGPRAAAILKWGGLLSSLVTDKGQGW 138
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH-QDE 119
R S + L+ V L+ N A+L +G+++E F F R+ ++Y SGFGG +LS L QD
Sbjct: 139 RLVSSIALNGGVFQLIANLTALLGVGLRIETYFWFTRVAIIYATSGFGGNVLSTLFIQD- 197
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
Q+ V AS A+ GL+GASL++++TNW + K + +T L+L +++ G MP +D
Sbjct: 198 -----QVFVSASAAVMGLIGASLADVLTNWDMTEWKLLKLTDLLLFSLISLGFGLMPQVD 252
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGY 205
N A+ GGF G LGF+LL+RPQ G+
Sbjct: 253 NFANAGGFFTGFCLGFVLLMRPQRGF 278
>gi|224066895|ref|XP_002302267.1| predicted protein [Populus trichocarpa]
gi|222843993|gb|EEE81540.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 126/234 (53%), Gaps = 35/234 (14%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTA-------------------- 40
M VN+C N D C F LGR SFQP EN GPS +
Sbjct: 71 MAVNDCGYNSHGD-CAFK-ALGRMSFQPLLENPFLGPSASAPIFSPCLRMSRPVYWKPNA 128
Query: 41 -------TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+L K+G + + L+ + + +R F C LHA V H + N L I+F+G+ LE++F
Sbjct: 129 VVDKTEESLDKMGAIRKTLLA-EHQTWRLFMCPLLHAGVFHFMINLLCIIFLGIYLEKEF 187
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R G++Y+LS F G L++ + +S +V +SGALFGLLGA++S + NW YT
Sbjct: 188 GSIRTGIIYMLSAFSGTLVTAIFVRDSP-----AVCSSGALFGLLGATVSALTRNWKFYT 242
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVS 207
NK ++ L V G N+ +G +P +DN + IG ++G LLG +L P+ V+
Sbjct: 243 NKVAALLTLFFVAGFNLMLGLLPYMDNYSSIGSMISGFLLGLVLFYTPKLRQVA 296
>gi|440793889|gb|ELR15060.1| peptidase, S54 family protein [Acanthamoeba castellanii str. Neff]
Length = 434
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/185 (40%), Positives = 111/185 (60%), Gaps = 6/185 (3%)
Query: 26 FQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFI 85
F+P S N FGP TL LG +V D E++RFF+ ++LHA +IHL N L
Sbjct: 203 FEPISVNPFFGPDAETLIALGAKDVPKIVEDYEVWRFFTPIFLHAGLIHLALN-LIFQLQ 261
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
LE GF+R+GL+Y++SGFGG L S L ISVGASGALFGL+G I
Sbjct: 262 CFMLERQMGFVRVGLVYIVSGFGGNLASSLFLPR-----LISVGASGALFGLVGMIFVVI 316
Query: 146 ITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGY 205
NW+L + C ++ +L +++ +++ +G +P +DN AH+GG V G++ I++ ++G
Sbjct: 317 FRNWSLVVSPCRNLVVLCIMVAISLFLGLLPNVDNFAHVGGLVTGLVASLIVVPSLKHGA 376
Query: 206 VSGPY 210
+GP+
Sbjct: 377 KAGPF 381
>gi|357142169|ref|XP_003572481.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1-like
[Brachypodium distachyon]
Length = 239
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 119/201 (59%), Gaps = 19/201 (9%)
Query: 40 ATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL--- 96
+ L+K+G L V + + + SC+WLHA +I L N L +LFIG+ LE+ FGF+
Sbjct: 19 SCLEKMGALDWAKVFHQHQGWHLISCIWLHAGLIRLFVNMLXLLFIGIHLEQXFGFVVSL 78
Query: 97 --RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
G++Y+LSGFGG + S L Q+ I VGASGAL L + LS++I WT+Y+N
Sbjct: 79 ARSHGIIYLLSGFGGSVQSVLLQNH-----YIFVGASGAL--XLCSMLSDLIVKWTVYSN 131
Query: 155 K---CVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYI 211
K C I L+ ++ +N+AI +P D A IGGFVA +GF+LL RP++G++ +
Sbjct: 132 KVSSCPVIITLLFIVLINLAIXIVPHADXFACIGGFVARFFVGFVLLARPKFGWMKRHEL 191
Query: 212 APGYELNHKKPKYQCHQKLLW 232
++ PKY+ Q +LW
Sbjct: 192 PQ----TNQPPKYKTXQYVLW 208
>gi|299471469|emb|CBN79420.1| Protein secE/sec61-gamma protein; Rhomboid-like protein [Ectocarpus
siliculosus]
Length = 766
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 64/170 (37%), Positives = 104/170 (61%), Gaps = 5/170 (2%)
Query: 31 ENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
EN +GPS TL + G +L+V +G+ +R S M+LHA V+H L N L L +G +E
Sbjct: 447 ENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVGAMVE 506
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
FG+ R+ +Y++SG G ++S + Q+ VGASGA+FG+ GA +++ NW+
Sbjct: 507 RVFGWWRVASIYLVSGVFGTIVSAIFV-----PTQVMVGASGAIFGVFGALWADLWQNWS 561
Query: 151 LYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLR 200
+ ++C T+L ++ VN+ +G MP +DN AH GG + G+ +G LL++
Sbjct: 562 VNQDRCRMFTVLFILTAVNIILGLMPFLDNFAHCGGMLMGLFMGLGLLVQ 611
>gi|414867426|tpg|DAA45983.1| TPA: hypothetical protein ZEAMMB73_979905 [Zea mays]
Length = 184
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 101/148 (68%), Gaps = 8/148 (5%)
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
F +R+G++Y++SG GG +LS L ISVGASGALFGLLGA LSE+ TNWT+Y
Sbjct: 6 FVAVRVGIIYLVSGVGGSVLSSLFIRN-----NISVGASGALFGLLGAMLSELFTNWTIY 60
Query: 153 TNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIA 212
NK ++ L++VI +N+AIG +P +DN AHIGGF+ G LLGF+LL+RP YG++ Y
Sbjct: 61 ANKAAALVTLLVVIAINLAIGILPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWMQ-RYAL 119
Query: 213 PGYELNHKKPKYQCHQ-KLLWVISVVVL 239
P ++ + KY +Q LL V SV+ +
Sbjct: 120 PS-DVKYTTKKYLAYQWALLAVASVLAV 146
>gi|413920155|gb|AFW60087.1| hypothetical protein ZEAMMB73_684125, partial [Zea mays]
Length = 191
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 61/115 (53%), Positives = 82/115 (71%), Gaps = 2/115 (1%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MYVN+CP + C LGRF+FQP EN L GPS+ATL K+G L VV+ + +
Sbjct: 74 MYVNDCPTH--NSNCAAAGFLGRFAFQPLRENPLLGPSSATLVKMGALDVAKVVHGRQGW 131
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
R +CMWLHA V+HLL N L +L +G++LE++FGF+RIGL+Y++SGFGG L+S L
Sbjct: 132 RLITCMWLHAGVVHLLINMLCLLVVGIRLEQEFGFVRIGLVYLISGFGGSLMSAL 186
>gi|328866134|gb|EGG14520.1| beta-lactamase family protein [Dictyostelium fasciculatum]
Length = 490
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 72/174 (41%), Positives = 102/174 (58%), Gaps = 7/174 (4%)
Query: 26 FQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFI 85
F+P N FGPS +TL +G L++Y GE +RFFS ++LH + HLL N L I
Sbjct: 259 FEPWKTNPWFGPSASTLLNVGAKYAPLILY-GEWWRFFSPIFLHVGIFHLLMNLGTQLRI 317
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
G++LE +G RI +Y+L G G L S + L + VGASG++FG LG L+++
Sbjct: 318 GMQLERSYGAHRIVPIYLLCGVMGNLCSSIFLP-----LSVQVGASGSIFGFLGVLLADL 372
Query: 146 ITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILL 198
NW+ + ++ L+ I + A+G F+PG+DN AH GGFV GIL G I L
Sbjct: 373 ARNWSALASPYLNCCSLVFTIITSFAVGLFLPGVDNFAHFGGFVMGILTGLIFL 426
>gi|223998534|ref|XP_002288940.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976048|gb|EED94376.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 239
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/180 (38%), Positives = 104/180 (57%), Gaps = 6/180 (3%)
Query: 21 LGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSL 80
L + +P S N + GPS TL K+G +L+V GE YR FS M LHA +IH N +
Sbjct: 1 LNGWKVEPLSVNPMIGPSAETLIKMGAKQTSLIVNQGEWYRLFSPMVLHAGLIHYFLNMM 60
Query: 81 AILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGA 140
A+ FIG +E+ GF +++V+ GG ++S + E ISVGASG +FGL+GA
Sbjct: 61 ALWFIGKAVEQCHGFAAAAIIFVIPAVGGTIMSAIFLPE-----YISVGASGGIFGLIGA 115
Query: 141 SLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLR 200
+++I NW+L +K V + +L ++ +N +G P +DN H+GG V G L G + R
Sbjct: 116 CIADICINWSLLFSKHVLLWLLFDIV-INCLVGLTPFVDNFTHLGGMVYGFLCGLSTIER 174
>gi|397602203|gb|EJK58107.1| hypothetical protein THAOC_21791 [Thalassiosira oceanica]
Length = 618
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 105/193 (54%), Gaps = 18/193 (9%)
Query: 21 LGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSL 80
L + +P S N + GPS TL K+G +L+V GE YR FS M LHA +IH L N +
Sbjct: 316 LNGWEVEPLSVNPMIGPSAETLLKMGAKQTSLIVNQGEWYRLFSPMVLHAGLIHYLLNMM 375
Query: 81 AILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGA 140
A+ FIG +E+ GF +L+++ GG +LS L E ISVGASG +FGL+GA
Sbjct: 376 ALWFIGKAVEQCHGFAAAAILFIIPAVGGTILSALFLPE-----YISVGASGGIFGLIGA 430
Query: 141 SLSEIITNWTLYTNKCVSITM-------------LILVIGVNMAIGFMPGIDNMAHIGGF 187
+++I+ NW L +K V+ T L+ I +N +G P +DN H+GG
Sbjct: 431 CVADILINWRLLFSKHVNSTKDGTRFRHIKVLMYLLFDIVINCLVGLTPFVDNFTHLGGM 490
Query: 188 VAGILLGFILLLR 200
V G + G + R
Sbjct: 491 VYGFMCGLSTIER 503
>gi|110289434|gb|ABB47903.2| Rhomboid family protein, expressed [Oryza sativa Japonica Group]
Length = 250
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/111 (54%), Positives = 84/111 (75%), Gaps = 5/111 (4%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
+G L + VV++ + +R +C+WLHA V+HLL N L+++ IG++LE+ FG++RIG++Y++
Sbjct: 1 MGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGIIYLV 60
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK 155
SG GG +LS L S ISVGASGALFGLLGA LSE+ TNWT+YTNK
Sbjct: 61 SGIGGSVLSSLFIRNS-----ISVGASGALFGLLGAMLSELFTNWTIYTNK 106
>gi|268637931|ref|XP_002649151.1| rhomboid family protein [Dictyostelium discoideum AX4]
gi|256012943|gb|EEU04099.1| rhomboid family protein [Dictyostelium discoideum AX4]
Length = 489
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 104/174 (59%), Gaps = 7/174 (4%)
Query: 26 FQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFI 85
F+P N FGP++ TL +G L++ +GE +RFF+ ++LH + H L N + L +
Sbjct: 261 FEPWKTNPWFGPNSYTLLDVGAKYSPLIL-NGEWWRFFTPIFLHVGIFHYLMNMVTQLRV 319
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
G++LE +G RI +Y+L G G L S + S Q VGASGA+FG LG L+++
Sbjct: 320 GMQLERAYGGHRIVPIYLLCGVAGNLCSAIMLPNSVQ-----VGASGAIFGFLGVLLTDL 374
Query: 146 ITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILL 198
I NW++ ++ L+ I + A+G F+PG+DN AH+GGF+AGIL I L
Sbjct: 375 IRNWSVLAKPWLNFGSLLFSIITSFAVGLFLPGVDNFAHLGGFIAGILTAAIFL 428
>gi|224008324|ref|XP_002293121.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971247|gb|EED89582.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 257
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 107/193 (55%), Gaps = 18/193 (9%)
Query: 24 FSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAIL 83
+ F+P S N + GPS TL +LG L+V + EI+R S M LHA VIH L N A+
Sbjct: 10 WKFEPLSVNPMIGPSAETLLRLGAKESYLIVQENEIWRLVSPMVLHAGVIHFLLNMFALW 69
Query: 84 FIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLS 143
++G +E+ GF + +V+ GG +LS + E I+VGASG +FGL+GA +S
Sbjct: 70 YVGKAIEQIHGFFPAVVQFVVPAVGGTILSAIFLPE-----YITVGASGGIFGLIGACIS 124
Query: 144 EIITNWTLYTNKCVS-----------ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGIL 192
+I+ NW L N+ V+ + +L L I VN +G P +DN H+GG + G L
Sbjct: 125 DIVMNWNLLFNEFVNERGVRLSHARVLVVLFLDIVVNCLVGLTPFVDNFTHLGGMILGFL 184
Query: 193 LGF--ILLLRPQY 203
G I L+ P++
Sbjct: 185 CGLSTIQLVSPRF 197
>gi|6573780|gb|AAF17700.1|AC009243_27 F28K19.7 [Arabidopsis thaliana]
Length = 735
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 118/221 (53%), Gaps = 29/221 (13%)
Query: 43 KKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLY 102
+ +GGLS + + EI+R + WLH+ + HL N +++F+G+ +E+ FG LRI ++Y
Sbjct: 99 QHMGGLSWKALTENHEIWRILTSPWLHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIY 158
Query: 103 VLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK------- 155
LSG G L + L + IS GA A FGL+GA LS + NW LY +K
Sbjct: 159 FLSGIMGSLFAVLF---VRNIPSISSGA--AFFGLIGAMLSALAKNWNLYNSKVKDFLWF 213
Query: 156 ----CVSITMLILVIG----------VNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
C + + L+I VN IGF+P IDN A+IGGF++G LLGF+LL +P
Sbjct: 214 CFVSCYLLLIAFLIISALAIIFTIFTVNFLIGFLPFIDNFANIGGFISGFLLGFVLLFKP 273
Query: 202 QYGYVSGPYIAPGYELNHKKP---KYQCHQKLLWVISVVVL 239
Q + + +E + + K Q + +L +I ++V
Sbjct: 274 QLRQMPPSHKGKLFEDDMNRSTRLKEQFDRPVLRIICLLVF 314
>gi|297719639|ref|NP_001172181.1| Os01g0147300 [Oryza sativa Japonica Group]
gi|255672873|dbj|BAH90911.1| Os01g0147300 [Oryza sativa Japonica Group]
Length = 121
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 86/115 (74%)
Query: 125 QISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHI 184
ISVGASGALFGLLG+ LSE+ITNWT+Y NK ++ L+++I +N+A+G +P +DN AH+
Sbjct: 4 NISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVIIILINLAVGILPHVDNFAHL 63
Query: 185 GGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
GGF +G LGF+LL+RPQ+GY++ G + K KY+ +Q +LWVI+ ++L
Sbjct: 64 GGFTSGFFLGFVLLVRPQFGYINQKNSPLGLPMGTTKSKYKTYQIILWVIATLIL 118
>gi|215768970|dbj|BAH01199.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 204
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 86/115 (74%)
Query: 125 QISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHI 184
ISVGASGALFGLLG+ LSE+ITNWT+Y NK ++ L+++I +N+A+G +P +DN AH+
Sbjct: 4 NISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVIIILINLAVGILPHVDNFAHL 63
Query: 185 GGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
GGF +G LGF+LL+RPQ+GY++ G + K KY+ +Q +LWVI+ ++L
Sbjct: 64 GGFTSGFFLGFVLLVRPQFGYINQKNSPLGLPMGTTKSKYKTYQIILWVIATLIL 118
>gi|440797932|gb|ELR19006.1| peptidase, S54 family protein [Acanthamoeba castellanii str. Neff]
Length = 459
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 71/168 (42%), Positives = 99/168 (58%), Gaps = 20/168 (11%)
Query: 31 ENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
+N FGP++ TLK LG ++ E +RFF+ M+LH ++HLL N IL +G LE
Sbjct: 243 DNPFFGPTSETLKTLGAKWTLAILEKNEAWRFFTAMFLHVGIVHLLIN---ILRVGWTLE 299
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
GF RIG +Y+LSGF G L SC+ + I+VGASGA FGL G ++++I NW
Sbjct: 300 RQIGFWRIGPIYILSGFAGNLASCIFLPNT-----ITVGASGAAFGLAGVLVADLILNWG 354
Query: 151 LYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
I+ + + +A+G +PG+DN AHIGG V G L G +LL
Sbjct: 355 ------------IVGLALALAVGLLPGLDNFAHIGGLVQGFLAGLVLL 390
>gi|219126391|ref|XP_002183442.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405198|gb|EEC45142.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 253
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 105/191 (54%), Gaps = 15/191 (7%)
Query: 20 HLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNS 79
L + F+P N +FGPS TL K+G L + + E +R F + LHA +IH + N
Sbjct: 6 QLNDWRFEPIRSNPMFGPSAETLIKMGALYAPYIHDEQEWFRIFVPIVLHAGIIHYVINM 65
Query: 80 LAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLG 139
LAI IG +E G+L+ L++++S GG + S L + ISVGASG +FGLLG
Sbjct: 66 LAIGLIGRSVERVHGWLKTALIFLISSVGGNIASALLMPSA-----ISVGASGGIFGLLG 120
Query: 140 ASLSEIITNWTL---------YTNKCVSITM-LILVIGVNMAIGFMPGIDNMAHIGGFVA 189
L+++ NW + Y+ S+ + LI + +N++IG P IDN AH+GGF+
Sbjct: 121 LCLADVCANWHVIQASRDDPSYSFPIRSVVVWLIFEVALNVSIGLTPYIDNFAHMGGFLY 180
Query: 190 GILLGFILLLR 200
G G ++ R
Sbjct: 181 GFTFGLAIVQR 191
>gi|219110511|ref|XP_002177007.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411542|gb|EEC51470.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 261
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 103/197 (52%), Gaps = 17/197 (8%)
Query: 21 LGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSL 80
L + F P N LFGPS L G L+V DG+ +R F+ ++LHA ++H N L
Sbjct: 7 LNGWKFAPLDVNPLFGPSAQALLDAGARQTALIVDDGQWFRIFTPIFLHAGLVHYGINML 66
Query: 81 AILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGA 140
A FIG +EE G + +L+ + G GG +L + + +SVGASG +FGL+G
Sbjct: 67 AFWFIGGAIEETHGIINTIVLFFIPGIGGNILGAIFLPQ-----YVSVGASGGIFGLIGG 121
Query: 141 SLSEIITNWTL------------YTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFV 188
L++I NW + + V+I L+L I +N+ +G P IDN H+GG V
Sbjct: 122 CLADIFLNWNILFIKEYEDDTLTWRKNAVAIAWLVLDIVINVVLGLTPYIDNFTHLGGLV 181
Query: 189 AGILLGFILLLRPQYGY 205
G+L GF ++ G+
Sbjct: 182 YGLLCGFSMIEPLAVGF 198
>gi|84468346|dbj|BAE71256.1| hypothetical protein [Trifolium pratense]
Length = 184
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/100 (49%), Positives = 75/100 (75%)
Query: 142 LSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
LSE+ITNW++Y NK ++ L+++IGVN+AIG +P +DN AHIGGF+ G LLGF+ L+RP
Sbjct: 2 LSELITNWSMYDNKIAALLTLVIIIGVNLAIGILPHVDNFAHIGGFLTGFLLGFVFLIRP 61
Query: 202 QYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLFV 241
Q+G+++ Y Y KPK++ +Q +LWV+S+++L V
Sbjct: 62 QFGWINQRYARVEYSPTRAKPKFKKYQCILWVLSLIILIV 101
>gi|281203068|gb|EFA77269.1| mitochondrial substrate carrier family protein [Polysphondylium
pallidum PN500]
Length = 800
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 100/174 (57%), Gaps = 7/174 (4%)
Query: 26 FQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFI 85
F+P N FGPS AT+ G + GE +RFFS ++LH + HLL N + + +
Sbjct: 571 FEPWKTNPWFGPS-ATVLLNAGAKYTPAMLAGEWWRFFSPIFLHVGIFHLLMNLMTQVRV 629
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
G++LE +G RI +Y+L G G L S + +S Q GASGA+FG LG ++++
Sbjct: 630 GMQLERAYGAHRIVPIYLLCGVMGNLCSAIFLPQSVQ-----AGASGAIFGFLGVLVTDL 684
Query: 146 ITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILL 198
NW+L + ++ L+ I ++ A+G F+PG+DN AH GGFV GI+ I L
Sbjct: 685 FRNWSLLASPFMNCCSLMFTIIISFAVGLFLPGVDNFAHFGGFVMGIMSSLIFL 738
>gi|390343899|ref|XP_003725988.1| PREDICTED: inactive rhomboid protein 1-like isoform 1
[Strongylocentrotus purpuratus]
Length = 888
Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/168 (35%), Positives = 91/168 (54%), Gaps = 16/168 (9%)
Query: 55 YDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
Y +IYR + ++LHA + H + + + + I LE+ G+ RI ++Y+ SG GG L S
Sbjct: 673 YPDQIYRLWLSLFLHAGIFHCVLSFIMHMTILRDLEKLAGWFRIAIIYIFSGIGGNLTSA 732
Query: 115 LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF 174
+ + VG +GA FGLL + E+ NW + N C ++ L+ +I V A+G
Sbjct: 733 I-----LIPYRAEVGPAGAQFGLLACLVVEVFQNWQILRNPCKALLKLLAIIMVLFALGL 787
Query: 175 MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
+P IDN AH+GGF+ GI L FI L PYI G ++ N K+
Sbjct: 788 LPWIDNFAHLGGFICGIFLSFIFL----------PYICFGEFDRNRKR 825
>gi|390343897|ref|XP_783490.3| PREDICTED: inactive rhomboid protein 1-like isoform 2
[Strongylocentrotus purpuratus]
Length = 887
Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats.
Identities = 60/168 (35%), Positives = 91/168 (54%), Gaps = 16/168 (9%)
Query: 55 YDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
Y +IYR + ++LHA + H + + + + I LE+ G+ RI ++Y+ SG GG L S
Sbjct: 672 YPDQIYRLWLSLFLHAGIFHCVLSFIMHMTILRDLEKLAGWFRIAIIYIFSGIGGNLTSA 731
Query: 115 LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF 174
+ + VG +GA FGLL + E+ NW + N C ++ L+ +I V A+G
Sbjct: 732 I-----LIPYRAEVGPAGAQFGLLACLVVEVFQNWQILRNPCKALLKLLAIIMVLFALGL 786
Query: 175 MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
+P IDN AH+GGF+ GI L FI L PYI G ++ N K+
Sbjct: 787 LPWIDNFAHLGGFICGIFLSFIFL----------PYICFGEFDRNRKR 824
>gi|212275536|ref|NP_001130569.1| uncharacterized protein LOC100191668 [Zea mays]
gi|194689512|gb|ACF78840.1| unknown [Zea mays]
gi|414591380|tpg|DAA41951.1| TPA: hypothetical protein ZEAMMB73_621528 [Zea mays]
Length = 173
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 70/98 (71%), Gaps = 5/98 (5%)
Query: 1 MYVNNCPKN---LGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDG 57
MY NNCPKN LG D CV L RFSFQP EN L GPS++TL+K+G L N +V+
Sbjct: 57 MYENNCPKNRSQLGGD-CV-AGFLRRFSFQPLRENPLLGPSSSTLEKMGALDWNKIVHQN 114
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGF 95
+ +R SC+WLHA +IHL+ N L++LFIG++LE+ FGF
Sbjct: 115 QGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGF 152
>gi|116292571|gb|ABJ97617.1| rhomboid-4 [synthetic construct]
Length = 796
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
LGGL+ N + GE+YR F M+LH +H+L N + + I +E D+G +R GLL+ +
Sbjct: 482 LGGLNTNYIRNYGELYRLFWSMYLHGGFMHILFNVICQIQILWMIEPDWGSIRTGLLFFI 541
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SG G LLS + +++G+SG+L+GL+GA + I W C + + L
Sbjct: 542 SGVTGNLLSAV-----CDPCGVTIGSSGSLYGLIGALFAYYIEYWKTIPRPCCVLIFMFL 596
Query: 165 VIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
V+ + +G DN AHIGG + G+L GF
Sbjct: 597 VVMFGIIVGMFGYTDNYAHIGGCLGGVLFGF 627
>gi|124506059|ref|XP_001351627.1| rhomboid protease ROM4 [Plasmodium falciparum 3D7]
gi|23504554|emb|CAD51434.1| rhomboid protease ROM4 [Plasmodium falciparum 3D7]
Length = 759
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 55/151 (36%), Positives = 84/151 (55%), Gaps = 5/151 (3%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
LGGL+ N + GE+YR F M+LH +H+L N + + I +E D+G +R GLL+ +
Sbjct: 445 LGGLNTNYIRNYGELYRLFWSMYLHGGFMHILFNVICQIQILWMIEPDWGSIRTGLLFFI 504
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SG G LLS + +++G+SG+L+GL+GA + I W C + + L
Sbjct: 505 SGVTGNLLSAV-----CDPCGVTIGSSGSLYGLIGALFAYYIEYWKTIPRPCCVLIFMFL 559
Query: 165 VIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
V+ + +G DN AHIGG + G+L GF
Sbjct: 560 VVMFGIIVGMFGYTDNYAHIGGCLGGVLFGF 590
>gi|219109878|ref|XP_002176692.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411227|gb|EEC51155.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 669
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 96/182 (52%), Gaps = 16/182 (8%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
EN + GPS ATL ++G L+V+ GE +R + LHA ++H N LA+ F+G +
Sbjct: 360 DENPMIGPSAATLIRMGAKDSYLIVHAGEGWRLLTSTILHAGLVHYFINMLALWFVGGAI 419
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E G++ +++ S GG +LS + E I+VGASG +FG +GA L++II NW
Sbjct: 420 EMSHGWISAMIIFSSSAIGGIILSAIFLPEF-----ITVGASGGIFGFIGACLADIIMNW 474
Query: 150 TL-------YTNKCVSITMLILV----IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
L K TM+++V I +N IG P +DN H+GG G L G +
Sbjct: 475 KLLFDGLLDENGKKHQHTMVVVVLLFDIALNSIIGLTPYVDNFTHLGGMAYGFLCGLSTI 534
Query: 199 LR 200
R
Sbjct: 535 ER 536
>gi|293334937|ref|NP_001169173.1| hypothetical protein [Zea mays]
gi|223975303|gb|ACN31839.1| unknown [Zea mays]
gi|414864371|tpg|DAA42928.1| TPA: hypothetical protein ZEAMMB73_077306 [Zea mays]
gi|414864372|tpg|DAA42929.1| TPA: hypothetical protein ZEAMMB73_077306 [Zea mays]
Length = 148
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY NNCP ++CV LGRFSFQP +N LFGPS+ATL K+G L VV+ + +
Sbjct: 54 MYANNCPAR-DTNKCVAR-FLGRFSFQPLRQNPLFGPSSATLTKMGALVWEKVVHRHQGW 111
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
R S MWLHA VIHL+ N L +LFIG++LE+ FG+ R
Sbjct: 112 RLLSSMWLHAGVIHLVANMLCLLFIGMRLEQQFGYGR 148
>gi|384495876|gb|EIE86367.1| hypothetical protein RO3G_11078 [Rhizopus delemar RA 99-880]
Length = 396
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/165 (36%), Positives = 93/165 (56%), Gaps = 5/165 (3%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
T TL++L G + +R +++HA +IH L N L L +GV LE+ G R
Sbjct: 175 DTCTLEELCGFGGFSSGTPNQSFRLVLPIFMHAGIIHFLVNMLTHLRLGVDLEKALGTPR 234
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
LLY+ SG G +LS + Q L S G SGALFGL+G +++ NW + +
Sbjct: 235 YALLYMASGIWGFVLSAMLS----QNLSASTGCSGALFGLIGYMFIDVLVNWKILPHPVR 290
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL-LRP 201
++ L++ +++ +G +PG+DN AHIGGF GIL+G ++ +RP
Sbjct: 291 NLMNLLMSTVISLVLGLLPGLDNFAHIGGFTVGILMGMLVAPMRP 335
>gi|413919341|gb|AFW59273.1| hypothetical protein ZEAMMB73_333041 [Zea mays]
Length = 273
Score = 102 bits (254), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
M+ NNCP++ G+ CV L RFSFQP EN L GP+ ATL++ G L VV+ + +
Sbjct: 76 MFYNNCPRSGGD--CVGRGFLRRFSFQPLKENPLLGPTAATLQRYGALDWYKVVHGNQAW 133
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
R SC WLHA +IHLL N ++++FIGV+LE+ FGF +
Sbjct: 134 RLESCTWLHAGLIHLLANMISLIFIGVRLEQQFGFCK 170
>gi|299470381|emb|CBN78430.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 403
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 93/174 (53%), Gaps = 8/174 (4%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
N L GPS TL LG L+ +G+++R + + LH V+H+ N + +G L
Sbjct: 202 DSNPLLGPSIETLMALGAKHLTLI-QEGQVWRLLTPILLHGGVLHIFMNLTSQFRMGTFL 260
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
EE +G ++Y + G GG LLSC+ + ++ VGASGA++ ++GA LS ++ W
Sbjct: 261 EERWGTRNWLIVYWVGGLGGNLLSCVASPD-----KVGVGASGAIYAIMGAWLSHVLCTW 315
Query: 150 TLYTN--KCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
K +T ++L V MA P +D AH+GG V GIL+G+ L +P
Sbjct: 316 NEEDEFAKGAQLTQVVLYTMVGMAASLAPIVDWAAHVGGLVTGILVGWALFHKP 369
>gi|330818784|ref|XP_003291518.1| hypothetical protein DICPUDRAFT_49886 [Dictyostelium purpureum]
gi|325078290|gb|EGC31949.1| hypothetical protein DICPUDRAFT_49886 [Dictyostelium purpureum]
Length = 202
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 85/144 (59%), Gaps = 6/144 (4%)
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
GE +RFFS ++LH + H L N L +G++LE +G RI +Y+L G G L S +
Sbjct: 3 QGEWWRFFSPIFLHVGIFHYLMNMATQLRVGMQLERAYGGHRIVPIYLLCGVMGNLCSAI 62
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG-F 174
+S Q VGASGA+FG LG L+++I NW + ++ L I + A+G F
Sbjct: 63 MLPQSVQ-----VGASGAIFGFLGVLLADLIRNWGVLARPYLNCGTLAFTIITSFAVGLF 117
Query: 175 MPGIDNMAHIGGFVAGILLGFILL 198
+PG+DN AH GGF+ GIL G+I L
Sbjct: 118 LPGVDNYAHFGGFIMGILTGWIFL 141
>gi|290991574|ref|XP_002678410.1| predicted protein [Naegleria gruberi]
gi|284092022|gb|EFC45666.1| predicted protein [Naegleria gruberi]
Length = 365
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 97/172 (56%), Gaps = 6/172 (3%)
Query: 32 NSLFGPSTATLKKLGGLSRNLVVYDG-EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
N + GP + K G +L+ DG + +RF M++H +V+ LL N + +L K+E
Sbjct: 137 NPMIGPKEEIVIKFGAKKNDLMKSDGTQFWRFLVFMFIHQSVLILLFNLMWLLTTVRKIE 196
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
+ R+ ++Y++SG GGGLLS + + IS G++ + G++ ASLSE+I NW
Sbjct: 197 GVWTAPRMFIIYMISGIGGGLLSSVFSFD-----LISTGSTSCIVGIISASLSELILNWD 251
Query: 151 LYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ N S+ +I+ + + IG +P +D AHIGGFV G L G +L R Q
Sbjct: 252 VVFNPFKSLFSVIMQLLIFFVIGLLPTVDQFAHIGGFVCGFLTGIMLCARKQ 303
>gi|260943073|ref|XP_002615835.1| hypothetical protein CLUG_04717 [Clavispora lusitaniae ATCC 42720]
gi|238851125|gb|EEQ40589.1| hypothetical protein CLUG_04717 [Clavispora lusitaniae ATCC 42720]
Length = 596
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/215 (34%), Positives = 110/215 (51%), Gaps = 28/215 (13%)
Query: 42 LKKLGGLSRNLVVYDGEI-----YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
L +L GLS + DGE YR + ++LHA +H+ N L L +G +E G+L
Sbjct: 251 LSELCGLS-GVREVDGEFIPDQWYRVVTPIFLHAGFLHIAFNMLLQLTMGAAVERQIGWL 309
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII----TNWTLY 152
+ G++Y+ SG G LL + S GASGALFG++ ++ I N +Y
Sbjct: 310 KFGVIYMASGIAGFLLGANFSPDGIA----STGASGALFGIIATNMLLFIFSGRKNTNMY 365
Query: 153 TNKCVSITMLILV--IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPY 210
K + M ++V + V+ A+G +PG+DN +HIGGF G+LL +LL P + YV G Y
Sbjct: 366 GTKRYGLFMAVMVFEVLVSFALGLLPGLDNFSHIGGFCMGLLLSVVLLQDPSHVYVDGVY 425
Query: 211 IAPGYE---------LNHKKPKYQCHQKLLWVISV 236
YE LN+ P + H K+ W +V
Sbjct: 426 T---YEPDTRTWQLFLNNWNPMNKWHDKVAWKATV 457
>gi|68071399|ref|XP_677613.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497796|emb|CAH98853.1| conserved hypothetical protein [Plasmodium berghei]
Length = 490
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/152 (38%), Positives = 86/152 (56%), Gaps = 5/152 (3%)
Query: 44 KLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYV 103
+LGGL+ N + GEIYR F M+LH ++H++ N + + I +E D+GFLR L+
Sbjct: 177 QLGGLNTNYIRNYGEIYRLFWSMYLHGGLMHIVFNVICQIQILWMIEPDWGFLRTLFLFF 236
Query: 104 LSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLI 163
+SG G LLS + +++G+SG+L+GL+GA + + W C I +I
Sbjct: 237 ISGITGNLLSAVCD-----PCGVTIGSSGSLYGLIGALFAYYVEYWKTIPRPCCVIIFMI 291
Query: 164 LVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
LV+ + IG DN AHIGG + GIL GF
Sbjct: 292 LVVIFGIFIGMFGYTDNYAHIGGCLGGILYGF 323
>gi|320163557|gb|EFW40456.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1087
Score = 99.0 bits (245), Expect = 2e-18, Method: Composition-based stats.
Identities = 54/155 (34%), Positives = 83/155 (53%), Gaps = 15/155 (9%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
YRF S ++LH +IH + ++ + ++E G+LR L++ +SG GG ++S +
Sbjct: 888 YRFISPIFLHVGIIHFIFVAIFENSVVGQVERSAGWLRTALIFFISGIGGDIISAIFVPN 947
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
Q +VG +GALFG LG E+ +W L V + LIL++ + + IG +P +D
Sbjct: 948 -----QPTVGGTGALFGFLGVLFVELFQSWQLCRRPVVELIKLILLVVIALVIGLLPWVD 1002
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG 214
N AHIGGF G++ G I L PYI G
Sbjct: 1003 NWAHIGGFFFGVVAGIIFL----------PYIVFG 1027
>gi|82540667|ref|XP_724634.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479343|gb|EAA16199.1| Arabidopsis thaliana F6D8.20 [Plasmodium yoelii yoelii]
Length = 659
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/155 (37%), Positives = 87/155 (56%), Gaps = 5/155 (3%)
Query: 44 KLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYV 103
+LGGL+ N + GEIYR F M+LH ++H++ N + + I +E D+GFLR L+
Sbjct: 345 QLGGLNTNYIRNYGEIYRLFWSMYLHGGLMHIIFNVICQIQILWMIEPDWGFLRTLFLFF 404
Query: 104 LSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLI 163
+SG G LLS + +++G+SG+L+GL+GA + + W C I +I
Sbjct: 405 ISGITGNLLSAVC-----DPCGVTIGSSGSLYGLIGALFAYYVEYWKTIPRPCCVIIFMI 459
Query: 164 LVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
LV+ + IG DN AHIGG + GIL GF +
Sbjct: 460 LVVIFGIFIGMFGYTDNYAHIGGCLGGILYGFATI 494
>gi|123479365|ref|XP_001322841.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121905694|gb|EAY10618.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 377
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 7/175 (4%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
SEN +FGPS L +G + V+ G +RFF+ M+LH+ IHL+ + +F ++
Sbjct: 134 SENPMFGPSQEVLLLMGA-KQASVILAGSWWRFFTSMFLHSGAIHLVIILIFAIFTS-RV 191
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E D GF R ++++SG G +LSCL E IS GASGA+FG +G +++ W
Sbjct: 192 ERDTGFWRAFFVFLVSGMYGTILSCLLVPE-----LISCGASGAIFGYIGLLFADLFAGW 246
Query: 150 TLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
K + +L+ + V + +G P IDN +IGGF+ G+L +LL +G
Sbjct: 247 RSNPKKGRDLGILVGLTVVGIILGLTPFIDNFNNIGGFIMGLLFALMLLPNLSFG 301
>gi|387929721|ref|ZP_10132398.1| serine protease of Rhomboid family [Bacillus methanolicus PB1]
gi|387586539|gb|EIJ78863.1| serine protease of Rhomboid family [Bacillus methanolicus PB1]
Length = 518
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/161 (37%), Positives = 102/161 (63%), Gaps = 10/161 (6%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+T+TL + G NL++ +GE +RFF+ ++LH ++HLL N+L++ ++G +E +G +R
Sbjct: 207 NTSTLIRFGA-KFNLLIIEGEWWRFFTPIFLHVGLLHLLMNTLSLYYLGTVVERLYGNVR 265
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
L+Y+ +GF G L S + + +S GASGA+FG GA L + + L+ + +
Sbjct: 266 FLLIYLFAGFAGSLTSFVF------SPSLSAGASGAIFGCFGALLYFGVIHPGLFF-RTM 318
Query: 158 SITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFIL 197
+ +L+ V+G+N+A+GF +PGIDN HIGG + G L IL
Sbjct: 319 GMNILV-VLGINLALGFTLPGIDNAGHIGGLIGGFLAAGIL 358
>gi|415885504|ref|ZP_11547432.1| Serine protease of Rhomboid family [Bacillus methanolicus MGA3]
gi|387591173|gb|EIJ83492.1| Serine protease of Rhomboid family [Bacillus methanolicus MGA3]
Length = 518
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 101/161 (62%), Gaps = 10/161 (6%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+T+TL + G N ++ +GE +RFF+ ++LH ++HLL N+LA+ ++G +E +G +R
Sbjct: 207 NTSTLIRFGA-KFNPLINEGEWWRFFTPIFLHIGLLHLLMNTLALYYLGTVVERIYGNVR 265
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
L+Y+ +GF G L S + + +S GASGA+FG GA L + + L+ + +
Sbjct: 266 FMLIYLAAGFAGSLASFVF------SPSLSAGASGAIFGCFGALLYFGVIHPRLFF-RTM 318
Query: 158 SITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFIL 197
+ +L+ V+G+N+A+GF +PGIDN HIGG + G L +L
Sbjct: 319 GMNILV-VLGINLALGFTLPGIDNAGHIGGLIGGFLAAGVL 358
>gi|115387927|ref|XP_001211469.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195553|gb|EAU37253.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 517
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 9/160 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LH+ +IH+ N L + +G +E G+ R GL+Y SG G +L
Sbjct: 244 QWWRFIIPMFLHSGIIHIGFNLLVQMTMGADMERMVGWWRYGLVYFASGIWGFVLG---- 299
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ S G SGALFG+L + +++ W + V + +++L +G++ +G +PG
Sbjct: 300 GNYAAPFEASCGCSGALFGILALYILDLLYTWKDRASPVVELVIMVLGVGISFVLGLLPG 359
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
+DN +HIGGFV G+ LG L+ LR + G PY+A
Sbjct: 360 LDNFSHIGGFVMGLALGLTLMRSPNALRERIGLARAPYVA 399
>gi|381210355|ref|ZP_09917426.1| hypothetical protein LGrbi_10556 [Lentibacillus sp. Grbi]
Length = 520
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 91/168 (54%), Gaps = 19/168 (11%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
ST TL + G ++ DGE +R + M+LH ++HLL N LA+ ++G +E +G LR
Sbjct: 208 STETLIEFGAKYNPAIIEDGEWWRIVASMFLHIGILHLLMNMLAVYYLGTVVERIYGSLR 267
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASL-----SEIITNWTLY 152
++Y L+G GGGL S T +S GASGALFGL GA L I T+
Sbjct: 268 FLIIYFLAGIGGGLASFAF------TTNVSAGASGALFGLFGALLFFGCIHRRIFFQTMG 321
Query: 153 TNKCVSITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLL 199
N L+ +IG+N+ G +P +DN AH+GG + G + IL L
Sbjct: 322 MN-------LLFIIGINIVFGLSVPQVDNGAHMGGLITGFIASAILFL 362
>gi|219110513|ref|XP_002177008.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411543|gb|EEC51471.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 570
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 94/190 (49%), Gaps = 17/190 (8%)
Query: 21 LGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSL 80
L + F P + N L GPS+ L LG +L++ +G+ +R + ++LHA ++H LTN L
Sbjct: 246 LSGWRFAPLNINPLIGPSSEQLIDLGARQTSLILEEGQWFRIVTPIFLHAGIVHYLTNML 305
Query: 81 AILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGA 140
A FIG +EE G +L+ + G GG +L + ISVGASG FG++G
Sbjct: 306 AFWFIGGAIEEAHGIATAIVLFFIPGVGGNILGATFLPQ-----YISVGASGGTFGMIGG 360
Query: 141 SLSEIITNWTL------------YTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFV 188
++I+ NW + + +I L + I + +G P IDN H+G
Sbjct: 361 YFADIVLNWNILCSRDHDEDVLNWRKNIAAIARLAIGIIALLVLGVTPFIDNFTHLGALC 420
Query: 189 AGILLGFILL 198
G+L G +
Sbjct: 421 YGLLCGLFAI 430
>gi|291002015|ref|XP_002683574.1| predicted protein [Naegleria gruberi]
gi|284097203|gb|EFC50830.1| predicted protein [Naegleria gruberi]
Length = 168
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 93/170 (54%), Gaps = 6/170 (3%)
Query: 32 NSLFGPSTATLKKLGGLSRNLVVY-DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
N L GP ATL +LG L++ + ++YR + ++LH ++HL N + + + + LE
Sbjct: 1 NPLIGPPEATLVQLGAKQGTLIISPNWQVYRLLTPIFLHGGIVHLCLNMMWQMSVMLPLE 60
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
+G + + +Y++SG GG LLS L E ++VGAS +LFG+LG +++ NW
Sbjct: 61 RHWGCIFVCFIYLISGVGGNLLSALFLPEI-----VTVGASSSLFGILGGIYADLWMNWR 115
Query: 151 LYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLR 200
+ ++ + + + +G +P IDN AH+GG + G L I + R
Sbjct: 116 YMPSPKRDFILITIQVVAQVIVGLIPWIDNFAHVGGLLVGFLSTMIFIPR 165
>gi|397645545|gb|EJK76880.1| hypothetical protein THAOC_01334 [Thalassiosira oceanica]
Length = 326
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 99/184 (53%), Gaps = 19/184 (10%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ GPS TL LG L+V + E++R + LHA +IH N A+ ++ +E
Sbjct: 1 MIGPSAETLVALGAKDSFLIVVEQEVWRLVTSGVLHAGLIHYFINMFALFYVAKAVESVH 60
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
GF + L+V+S GG +LS + + I+VGASG + GL+GA LS+II NW L
Sbjct: 61 GFWAVSTLFVISSTGGTILSAIFLPQ-----YITVGASGGILGLIGACLSDIILNWNLLF 115
Query: 154 NKCVS------------ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF--ILLL 199
N V+ + +L+L + VN+ IG P +DN +H+GG + G L G I ++
Sbjct: 116 NDFVNPERRSRFAHAKVLVVLLLDVVVNIIIGMTPFVDNWSHVGGMMYGFLCGLSTIHMV 175
Query: 200 RPQY 203
P++
Sbjct: 176 SPRF 179
>gi|225572886|ref|ZP_03781641.1| hypothetical protein RUMHYD_01077 [Blautia hydrogenotrophica DSM
10507]
gi|225039751|gb|EEG49997.1| peptidase, S54 family [Blautia hydrogenotrophica DSM 10507]
Length = 222
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 94/166 (56%), Gaps = 4/166 (2%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+T + + G + L+V E YR F+ M+LH + HL N L + IG LE G ++
Sbjct: 51 NTEHMLRCGAANAALIVEAKEYYRLFTSMFLHFGMAHLANNMLVLYVIGDNLERAVGKVK 110
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
L+Y+ SG GG +LSC + + + L +S GASGA+FG++GA L ++ N + +
Sbjct: 111 YLLIYLFSGLGGNILSC-YLEYQEGALSVSAGASGAIFGVMGAMLYVLLANHGRLED--L 167
Query: 158 SITMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ ++++ G ++ GF G+DN AH+GG + G L+ +L R +
Sbjct: 168 TARQIVIMAGFSLYFGFTSSGVDNAAHVGGLICGFLVAMLLYHRKR 213
>gi|389584264|dbj|GAB66997.1| rhomboid protease [Plasmodium cynomolgi strain B]
Length = 621
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 91/170 (53%), Gaps = 5/170 (2%)
Query: 29 RSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVK 88
R E+S +T +LGGL+ N + GEIYR F ++LH +H++ N + + I
Sbjct: 291 RGESSWDSVNTRVYNQLGGLNTNYIRNYGEIYRLFWSVYLHGGFMHIIFNVICQIQILWI 350
Query: 89 LEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITN 148
+E D+GF+R +L+ SG G LLS + +++G+SGAL+GL+GA + I
Sbjct: 351 IEPDWGFIRTLILFFTSGVTGNLLSAVC-----DPCGVTIGSSGALYGLIGALFTYYIEY 405
Query: 149 WTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
W C + +++V + IG DN AH+GG + GIL GF +
Sbjct: 406 WKTIPRPCCVVIFMLIVTIFGIFIGMFGYTDNYAHMGGCLGGILYGFATI 455
>gi|237832509|ref|XP_002365552.1| rhomboid-like protease 4 [Toxoplasma gondii ME49]
gi|211963216|gb|EEA98411.1| rhomboid-like protease 4 [Toxoplasma gondii ME49]
Length = 664
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 95/171 (55%), Gaps = 16/171 (9%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTN---SLAILFIG 86
+ S P+ L+ LGGL N + E +R F+ M++H +H+L N + IL+I
Sbjct: 336 AATSWDSPNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWI- 394
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
+E D+GFLR LL+ L G G LLS + I+VG+SG+++ LLGA + +
Sbjct: 395 --IEPDWGFLRTTLLFFLGGISGNLLSAV-----ADPCSITVGSSGSMYALLGALIPYCV 447
Query: 147 TNW-TLYTNKCVSITMLILVIGVNMAI-GFMPGIDNMAHIGGFVAGILLGF 195
W ++ C+ + M++++IG+ + GF DN AH+GG + GIL GF
Sbjct: 448 EYWKSIPRPGCILVFMIVVIIGILTGMAGF---TDNYAHMGGALGGILWGF 495
>gi|74786304|sp|Q695T8.1|RHBL4_TOXGO RecName: Full=Rhomboid-like protease 4
gi|47500379|gb|AAT29067.1| rhomboid-like protease 4 [Toxoplasma gondii]
Length = 641
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 96/171 (56%), Gaps = 16/171 (9%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTN---SLAILFIG 86
+ S P+ L+ LGGL N + E +R F+ M++H +H+L N + IL+I
Sbjct: 313 AATSWDSPNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWI- 371
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
+E D+GFLR LL+ L G G LLS + S I+VG+SG+++ LLGA + +
Sbjct: 372 --IEPDWGFLRTTLLFFLGGISGNLLSAVADPCS-----ITVGSSGSMYALLGALIPYCV 424
Query: 147 TNW-TLYTNKCVSITMLILVIGVNMAI-GFMPGIDNMAHIGGFVAGILLGF 195
W ++ C+ + M++++IG+ + GF DN AH+GG + GIL GF
Sbjct: 425 EYWKSIPRPGCILVFMIVVIIGILTGMAGF---TDNYAHMGGALGGILWGF 472
>gi|311030831|ref|ZP_07708921.1| Serine protease of Rhomboid family, contains TPR repeats [Bacillus
sp. m3-13]
Length = 503
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/163 (38%), Positives = 96/163 (58%), Gaps = 10/163 (6%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
++ TL K G N + +GE +RFF+ + LH +HLL N++AI ++G +E +G +R
Sbjct: 202 NSETLVKYGA-KYNPAILEGEWWRFFTPIVLHIGFLHLLLNTMAIFYLGSAVERIYGNIR 260
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+Y+ +GF G L S + T +S GASGA+FG GA L I + ++ + +
Sbjct: 261 FLAIYLFAGFTGSLASFVF------TSSLSAGASGAIFGCFGALLFVGIIHPKMFF-RTM 313
Query: 158 SITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLL 199
+L+L IG+N+AIGF +PGIDN HIGG + G L ++ L
Sbjct: 314 GANILVL-IGINLAIGFTIPGIDNAGHIGGLIGGFLASAVVHL 355
>gi|288555804|ref|YP_003427739.1| rhomboid protein membrane-associated serine peptidase [Bacillus
pseudofirmus OF4]
gi|288546964|gb|ADC50847.1| rhomboid protein, putative membrane-associated serine peptidase
[Bacillus pseudofirmus OF4]
Length = 512
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 9/159 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N + +GE +RFFS M+LH IHL NSLA+ ++G +E +G R L+Y ++G
Sbjct: 216 GAKYNPAILEGEWWRFFSSMFLHIGFIHLFMNSLALFYLGGAVERMYGTSRFVLIYFIAG 275
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
G + S + Q++ GASGA+FGL GA L L+ + + + +L+ ++
Sbjct: 276 LIGSISSFAFNE------QVAAGASGAIFGLFGALLYFGTAQPKLFF-RTMGMNVLV-IL 327
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
G+N+ GF MP IDN AHIGG V G L ++ L + G
Sbjct: 328 GINLVFGFVMPMIDNGAHIGGLVGGFLAAALVQLPKEKG 366
>gi|319651546|ref|ZP_08005673.1| hypothetical protein HMPREF1013_02285 [Bacillus sp. 2_A_57_CT2]
gi|317396613|gb|EFV77324.1| hypothetical protein HMPREF1013_02285 [Bacillus sp. 2_A_57_CT2]
Length = 506
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 94/156 (60%), Gaps = 10/156 (6%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
T+TL K G N ++ DGE +RF + + LH ++HLL N+LA+ ++G +E +G LR
Sbjct: 204 DTSTLIKYGA-KFNPLILDGEWWRFLTPIVLHIGLLHLLMNTLALFYLGSAVERVYGNLR 262
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+Y+ +GFGG L S + + +S GASGA+FG GA L + +L+ + +
Sbjct: 263 FLFIYLAAGFGGTLASFIF------SPTLSAGASGAIFGCFGALLYFGLIYPSLFF-RTI 315
Query: 158 SITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGIL 192
+I+V+G+N+A GF +PGIDN HIGG + G L
Sbjct: 316 GFN-IIVVLGINLAFGFTIPGIDNAGHIGGLIGGFL 350
>gi|358374890|dbj|GAA91478.1| rhomboid family membrane protein [Aspergillus kawachii IFO 4308]
Length = 516
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 88/160 (55%), Gaps = 9/160 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M++H IH+ N + L +GV +E G+ R L+YV SG G +L +
Sbjct: 244 QWFRFIIPMFIHTGFIHIGFNLIVQLTMGVDMERMIGWWRYFLVYVASGIWGFVLGGNYA 303
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ + S G SGALFG+L + +++ W + V + ++IL I V+ +G +PG
Sbjct: 304 GQGEA----SCGCSGALFGILALFILDLLYTWKDRASPWVELIIMILGIAVSFVLGLLPG 359
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
+DN AHIGGF+ G+ LG LL LR + G PY+A
Sbjct: 360 LDNFAHIGGFIMGLALGLCLLRSPNALRERIGLARNPYVA 399
>gi|149181994|ref|ZP_01860480.1| hypothetical protein BSG1_06322 [Bacillus sp. SG-1]
gi|148850259|gb|EDL64423.1| hypothetical protein BSG1_06322 [Bacillus sp. SG-1]
Length = 485
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/154 (37%), Positives = 86/154 (55%), Gaps = 9/154 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ DGE +RFF+ + +H +H+L N+ A+ F+G +E FG R +Y+ +G
Sbjct: 189 GAKYNPLIVDGEWWRFFTPIVIHIGFLHMLMNTFALYFLGPAVERIFGSARFLFIYLFAG 248
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
F G L S + D +S GASGA+FG GA L + ++ T +++VI
Sbjct: 249 FSGTLASFVFND------SLSAGASGAIFGCFGALLYFGTAHPKIFFRTMG--TNILVVI 300
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLL 199
G+N+A GF +PGIDN HIGG G L I+ L
Sbjct: 301 GINLAFGFTIPGIDNAGHIGGLAGGALSAAIVHL 334
>gi|51860140|gb|AAU11320.1| rhomboid 4 [Toxoplasma gondii]
Length = 634
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 13/170 (7%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTN---SLAILFIG 86
+ S P+ L+ LGGL N + E +R F+ M++H +H+L N + IL+I
Sbjct: 305 AATSWDSPNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWI- 363
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
+E D+GFLR LL+ L G G LLS + S I+VG+SG+++ LLGA + +
Sbjct: 364 --IEPDWGFLRTTLLFFLGGISGNLLSAVADPCS-----ITVGSSGSMYALLGALIPYCV 416
Query: 147 TNW-TLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
W ++ C+ + M+++VI + + G DN AH+GG + GIL GF
Sbjct: 417 EYWKSIPRPGCILVFMIVVVI-IGILTGMAGFTDNYAHMGGALGGILWGF 465
>gi|403237491|ref|ZP_10916077.1| rhomboid protein membrane-associated serine peptidase [Bacillus sp.
10403023]
Length = 515
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 93/177 (52%), Gaps = 10/177 (5%)
Query: 33 SLFGPSTATLKKLG-GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEE 91
L+G ST T L G N + +GE +RFF+ M LH IHLL N+ A+ ++G ++E
Sbjct: 199 ELYGGSTNTETLLKYGAKENFRILNGEWWRFFTPMILHIGFIHLLMNTFALYYLGTEVER 258
Query: 92 DFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTL 151
+G R ++YV +GF G L S + IS GASGA+FG GA L +L
Sbjct: 259 LYGKSRFLMIYVFAGFLGSLASFVF------NANISAGASGAIFGCFGALLFFGTAYPSL 312
Query: 152 YTNKCVSITMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQYGYVS 207
+ + I++I N+ +GFM PGIDN HIGG V G L I+ L + Y
Sbjct: 313 FFRTMGPNVIGIIII--NLVLGFMIPGIDNSGHIGGLVGGFLAASIVHLPKRKDYAK 367
>gi|50547561|ref|XP_501250.1| YALI0B23078p [Yarrowia lipolytica]
gi|49647116|emb|CAG83503.1| YALI0B23078p [Yarrowia lipolytica CLIB122]
Length = 611
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 90/160 (56%), Gaps = 4/160 (2%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
+K+ G + G+ +RF + +++HA +IH+ N L + +G +E+ G +R +
Sbjct: 335 MKQTPGSDGGSITSGGQWWRFITPIFMHAGIIHIGFNMLLQMTLGADIEKQIGIIRYFFI 394
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y G GG L + + S GASG+LFG++ L +++ NW+++ N + +
Sbjct: 395 YFACGIGGFLFGGNYTPDGI----ASTGASGSLFGIIAIDLLDLLFNWSIFRNPVRILII 450
Query: 162 LILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
I+ I V+ +G +PG+DN +HIGGF+ G+LLG +L P
Sbjct: 451 HIIEIVVSFVLGLLPGLDNFSHIGGFIVGVLLGIAILRSP 490
>gi|221488003|gb|EEE26217.1| rhomboid-like protease 4 [Toxoplasma gondii GT1]
Length = 634
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 13/170 (7%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTN---SLAILFIG 86
+ S P+ L+ LGGL N + E +R F+ M++H +H+L N + IL+I
Sbjct: 305 AATSWDSPNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWI- 363
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
+E D+GFLR LL+ L G G LLS + I+VG+SG+++ LLGA + +
Sbjct: 364 --IEPDWGFLRTTLLFFLGGISGNLLSAV-----ADPCSITVGSSGSMYALLGALIPYCV 416
Query: 147 TNW-TLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
W ++ C+ + M+++VI + + G DN AH+GG + GIL GF
Sbjct: 417 EYWKSIPRPGCILVFMIVVVI-IGILTGMAGFTDNYAHMGGALGGILWGF 465
>gi|221508525|gb|EEE34094.1| rhomboid, putative [Toxoplasma gondii VEG]
Length = 634
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 93/170 (54%), Gaps = 13/170 (7%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTN---SLAILFIG 86
+ S P+ L+ LGGL N + E +R F+ M++H +H+L N + IL+I
Sbjct: 305 AATSWDSPNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWI- 363
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
+E D+GFLR LL+ L G G LLS + I+VG+SG+++ LLGA + +
Sbjct: 364 --IEPDWGFLRTTLLFFLGGISGNLLSAV-----ADPCSITVGSSGSMYALLGALIPYCV 416
Query: 147 TNW-TLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
W ++ C+ + M+++VI + + G DN AH+GG + GIL GF
Sbjct: 417 EYWKSIPRPGCILVFMIVVVI-IGILTGMAGFTDNYAHMGGALGGILWGF 465
>gi|238502587|ref|XP_002382527.1| rhomboid family membrane protein [Aspergillus flavus NRRL3357]
gi|220691337|gb|EED47685.1| rhomboid family membrane protein [Aspergillus flavus NRRL3357]
gi|391871078|gb|EIT80244.1| Rhomboid family protein [Aspergillus oryzae 3.042]
Length = 518
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 87/160 (54%), Gaps = 9/160 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YRF ++LH IH+ N L + +GV +E G+ R GL+Y SG G +L +
Sbjct: 246 QWYRFIVPIFLHGGFIHIGFNLLCQMTMGVDMERMVGWWRYGLVYFASGIWGFVLGGNYA 305
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
Q S G SGALFG+L + ++ W + V + +++L +G++ +G +PG
Sbjct: 306 ----APFQPSSGCSGALFGILALFILDLFYTWKERPSPFVELIIMVLGVGISFVLGLLPG 361
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
+DN +HIGGF+ G+ LG ++ LR + G PY+A
Sbjct: 362 LDNFSHIGGFIMGLALGLCIMRSPNALRERIGLARNPYVA 401
>gi|290982897|ref|XP_002674166.1| predicted protein [Naegleria gruberi]
gi|284087754|gb|EFC41422.1| predicted protein [Naegleria gruberi]
Length = 424
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 94/171 (54%), Gaps = 13/171 (7%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
S N GPS++TL LG S + + +++R F+ + +HA +HL N + I +
Sbjct: 218 SSNPSIGPSSSTLLLLGAKSAYKIKKEYQLWRLFTPLIMHAGFLHLFMNLFVQVMICMGY 277
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E+ + + R+ +Y+++G GG LLSC+ +S +SVGASGA+ GL+GA ++ II W
Sbjct: 278 EKTWKWYRVLPIYIIAGVGGNLLSCVALPDS-----VSVGASGAIMGLIGAKVANIIIRW 332
Query: 150 TLYTN-----KCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
+C+S+ +I+ + + F +D H+GG + G ++GF
Sbjct: 333 KKIPTQPKIMQCISVGFIIV---ITLLWSFSDYVDYAGHLGGLMCGFIIGF 380
>gi|169775935|ref|XP_001822434.1| DHHC zinc finger membrane protein [Aspergillus oryzae RIB40]
gi|83771169|dbj|BAE61301.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 518
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 86/160 (53%), Gaps = 9/160 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YRF ++LH IH+ N L + +GV +E G+ R GL+Y SG G +L
Sbjct: 246 QWYRFIVPIFLHGGFIHIGFNLLCQMTMGVDMERMVGWWRYGLVYFASGIWGFVLG---- 301
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
Q S G SGALFG+L + ++ W + V + +++L +G++ +G +PG
Sbjct: 302 GNYAAPFQPSSGCSGALFGILALFILDLFYTWKERPSPFVELIIMVLGVGISFVLGLLPG 361
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
+DN +HIGGF+ G+ LG ++ LR + G PY+A
Sbjct: 362 LDNFSHIGGFIMGLALGLCIMRSPNALRERIGLARNPYVA 401
>gi|326435850|gb|EGD81420.1| hypothetical protein PTSG_02140 [Salpingoeca sp. ATCC 50818]
Length = 1498
Score = 92.4 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 55/155 (35%), Positives = 80/155 (51%), Gaps = 15/155 (9%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
YR + M+LH +HL L V++E+ G+LR+ +Y+L+G GG L+S
Sbjct: 1299 YRLYLAMFLHVGFVHLFFVVLMQHSFAVEIEKLAGWLRMFFIYMLAGIGGYLVSA----- 1353
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+ Q+S GAS AL+GLLG E+ +W L + L L+ V +A+G +P ID
Sbjct: 1354 NFTPYQVSTGASPALYGLLGCLFVELFQSWQLLESPKKEFLKLFLIAIVALAVGLLPYID 1413
Query: 180 NMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG 214
N +H+GGF GIL + L PYI G
Sbjct: 1414 NWSHLGGFAFGILSSIVFL----------PYITFG 1438
>gi|187934985|ref|YP_001884978.1| rhomboid family protein [Clostridium botulinum B str. Eklund 17B]
gi|187723138|gb|ACD24359.1| rhomboid family protein [Clostridium botulinum B str. Eklund 17B]
Length = 321
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 89/159 (55%), Gaps = 14/159 (8%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++Y GEI+R +C +LH + HLL+N ++ +G ++E FG + +Y S
Sbjct: 172 GAKYNPLIYQGEIWRLITCAFLHGGIAHLLSNMYSLYILGPQVERIFGLKKYLCIYFTSA 231
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGA----SLSEIITNWTLYTNKCVSITML 162
LLS L + S +SVGASGA+FGLLGA S+ E Y V I +L
Sbjct: 232 ITSSLLSVLLNENS-----VSVGASGAIFGLLGAILIFSIKERHRIKKGYILNLVGIIIL 286
Query: 163 ILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
IL+ G + GIDN+ HIGGF+ G+++G IL+++
Sbjct: 287 ILMSGFT-----IRGIDNLGHIGGFLGGLIMGRILMIKK 320
>gi|384251749|gb|EIE25226.1| rhomboid-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 278
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/149 (38%), Positives = 81/149 (54%), Gaps = 9/149 (6%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
N V GE YR +C +LHA ++HL N A+ IG ++E G+ +YVLSG G
Sbjct: 118 NEKVASGEFYRLLTCTFLHAGILHLGLNCWALYSIGPEVEGVMGYSTFAAIYVLSGLAGS 177
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
S L D I+VGASGA+FGLLGA+ + N L +T + ++ +N+
Sbjct: 178 TASFLFSD------LITVGASGAIFGLLGATAGYFLRNRAL-QGSTQQLTYIAGIVALNI 230
Query: 171 AIGFMPG--IDNMAHIGGFVAGILLGFIL 197
+G PG IDN H+GG G+ LG+I+
Sbjct: 231 FLGASPGSMIDNSGHLGGLFTGVALGYIM 259
>gi|410460563|ref|ZP_11314238.1| hypothetical protein BAZO_14959 [Bacillus azotoformans LMG 9581]
gi|409926821|gb|EKN63973.1| hypothetical protein BAZO_14959 [Bacillus azotoformans LMG 9581]
Length = 507
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 93/161 (57%), Gaps = 10/161 (6%)
Query: 40 ATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIG 99
+TL K G N + +G+ +RF + M+LH +HLL N+LA+ ++G+ +E +G R
Sbjct: 203 STLIKFGA-KYNPAILEGDWWRFITPMFLHIGFLHLLMNTLALYYLGISVERIYGTWRFL 261
Query: 100 LLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSI 159
+LY +G GG+ S T Q+S GASGA+FG GA L + + +L+
Sbjct: 262 ILYFAAGITGGVASFAF------TTQVSAGASGAIFGCFGALLYFGVVHPSLFLRSMG-- 313
Query: 160 TMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLL 199
+I+V+G+N+A GF+ P +DN AHIGG + G L I+ L
Sbjct: 314 WNIIVVLGINLAFGFLVPMVDNSAHIGGLIGGFLASAIVHL 354
>gi|148657883|ref|YP_001278088.1| rhomboid family protein [Roseiflexus sp. RS-1]
gi|148569993|gb|ABQ92138.1| Rhomboid family protein [Roseiflexus sp. RS-1]
Length = 283
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 86/146 (58%), Gaps = 8/146 (5%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
G+ YRF + M+LH ++ HL NS A+ +G + E FG R LY+++G GGG++S
Sbjct: 97 GQYYRFLTAMFLHGSIAHLFFNSFALYSLGFEAERIFGSQRFLALYLIAGLGGGVMSYAF 156
Query: 117 QDESQQTLQISVGASGALFGLLGASLS-EIITNWTLYTNKCVSITMLILVIGVNMAIGFM 175
SVGASGA+FGL+GA ++ ++ L + LI V+ +N+A+GF
Sbjct: 157 NPNP------SVGASGAIFGLIGALIAFYVVARSVLGGIARQQLGSLIFVVMINLALGFT 210
Query: 176 -PGIDNMAHIGGFVAGILLGFILLLR 200
P IDN AHIGG + G ++G++L R
Sbjct: 211 SPYIDNNAHIGGLLTGAVIGWLLAPR 236
>gi|350636534|gb|EHA24894.1| hypothetical protein ASPNIDRAFT_129525 [Aspergillus niger ATCC
1015]
Length = 891
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 9/160 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M++H +H+ N + + +GV +E G+ R ++YV SG G +L +
Sbjct: 163 QWFRFIIPMFIHTGFVHIGFNLIVQMTMGVDMERMIGWWRYFVVYVASGIWGFVLGGNYA 222
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ + S G SGALFG+L + +++ W + V + ++IL I V+ +G +PG
Sbjct: 223 GQGEA----SCGCSGALFGILALFILDLLYTWKDRPSPWVEMIIMILGIAVSFVLGLLPG 278
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
+DN AHIGGF+ G+ LG LL LR + G PY+A
Sbjct: 279 LDNFAHIGGFIMGLALGLCLLRSPNALRERIGLARNPYVA 318
>gi|145251413|ref|XP_001397220.1| DHHC zinc finger membrane protein [Aspergillus niger CBS 513.88]
gi|134082753|emb|CAK46736.1| unnamed protein product [Aspergillus niger]
Length = 513
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 88/160 (55%), Gaps = 9/160 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M++H +H+ N + + +GV +E G+ R ++YV SG G +L +
Sbjct: 244 QWFRFIIPMFIHTGFVHIGFNLIVQMTMGVDMERMIGWWRYFVVYVASGIWGFVLGGNYA 303
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ + S G SGALFG+L + +++ W + V + ++IL I V+ +G +PG
Sbjct: 304 GQGEA----SCGCSGALFGILALFILDLLYTWKDRPSPWVEMIIMILGIAVSFVLGLLPG 359
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
+DN AHIGGF+ G+ LG LL LR + G PY+A
Sbjct: 360 LDNFAHIGGFIMGLALGLCLLRSPNALRERIGLARNPYVA 399
>gi|197302289|ref|ZP_03167348.1| hypothetical protein RUMLAC_01016 [Ruminococcus lactaris ATCC
29176]
gi|197298720|gb|EDY33261.1| peptidase, S54 family [Ruminococcus lactaris ATCC 29176]
Length = 211
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 94/161 (58%), Gaps = 10/161 (6%)
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
G + +++ + E YRFF+CM+LH + HLL N + + +G +LE G ++ L+Y +S
Sbjct: 40 GAMYEPMILENQEYYRFFTCMFLHFGIQHLLNNMVMLGALGWQLEPVIGKVKYLLIYFIS 99
Query: 106 GFGGGLLS----CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
G GG LS +H+++S +S GASGA+FGL+GA L +I N + M
Sbjct: 100 GLGGSGLSFAWNVMHEEQS-----VSAGASGAIFGLMGALLYVVIANRGRLGDLSGKGMM 154
Query: 162 LILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
L++++G+ + G+DN+AHIGG V G +L IL + +
Sbjct: 155 LMVLLGLYCGM-TSTGVDNLAHIGGLVCGFILALILYRKKK 194
>gi|357580551|sp|C8VCL5.1|Y0929_EMENI RecName: Full=Uncharacterized rhomboid protein AN10929
gi|259483309|tpe|CBF78591.1| TPA: rhomboid family membrane protein (AFU_orthologue;
AFUA_2G16490) [Aspergillus nidulans FGSC A4]
Length = 503
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 9/160 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LH+ +H+ N L + +G +E G+ R GL+Y+ SG G +L +
Sbjct: 250 QWFRFIIPMFLHSGFVHIGFNLLVQMTMGADMERMIGWWRYGLVYLSSGIWGFVLGGNYA 309
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ + S G SGALFG+L + +++ W N V + +++L I V+ +G +PG
Sbjct: 310 GQGE----ASCGCSGALFGILALFVLDLLYGWNDRQNPWVELIIMVLGIAVSFVLGLLPG 365
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
+DN +H+GGF G+ LG ++ LR + G PY+A
Sbjct: 366 LDNFSHLGGFTMGLALGLCVMRSPNALRERIGLARSPYVA 405
>gi|67900700|ref|XP_680606.1| hypothetical protein AN7337.2 [Aspergillus nidulans FGSC A4]
gi|40742518|gb|EAA61708.1| hypothetical protein AN7337.2 [Aspergillus nidulans FGSC A4]
Length = 1070
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 9/160 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LH+ +H+ N L + +G +E G+ R GL+Y+ SG G +L +
Sbjct: 250 QWFRFIIPMFLHSGFVHIGFNLLVQMTMGADMERMIGWWRYGLVYLSSGIWGFVLGGNYA 309
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ + S G SGALFG+L + +++ W N V + +++L I V+ +G +PG
Sbjct: 310 GQGE----ASCGCSGALFGILALFVLDLLYGWNDRQNPWVELIIMVLGIAVSFVLGLLPG 365
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
+DN +H+GGF G+ LG ++ LR + G PY+A
Sbjct: 366 LDNFSHLGGFTMGLALGLCVMRSPNALRERIGLARSPYVA 405
>gi|393788564|ref|ZP_10376691.1| hypothetical protein HMPREF1068_02971 [Bacteroides nordii
CL02T12C05]
gi|392654244|gb|EIY47892.1| hypothetical protein HMPREF1068_02971 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 92/167 (55%), Gaps = 6/167 (3%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
+LF P T L + G L + G +R +C ++H ++H+L N A+++IGV LE
Sbjct: 58 NLFEPKTLELLQWGADFGPLTL-TGSWWRTLTCNFVHIGIVHILMNMYALVYIGVLLEPM 116
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
FG R+ Y+L+G + S E+ IS GASGA+FGL G L+ + +
Sbjct: 117 FGTRRMFAAYLLTGLCSAVSSLFWHAET-----ISAGASGAIFGLYGIFLAFLCFHHIEK 171
Query: 153 TNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLL 199
+ ++ +++ +G N+ G GIDN AHIGG ++G +LGF+ ++
Sbjct: 172 AQRNALLSSILIFVGYNLIYGLKEGIDNAAHIGGLISGFILGFVYVM 218
>gi|376261459|ref|YP_005148179.1| hypothetical protein [Clostridium sp. BNL1100]
gi|373945453|gb|AEY66374.1| putative membrane protein [Clostridium sp. BNL1100]
Length = 519
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/152 (41%), Positives = 88/152 (57%), Gaps = 10/152 (6%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L+ G NL++ +G+ +RFF+ M+LHA+++HL N +I IG ++E+ FG R +
Sbjct: 214 LEPFGAKVNNLIM-EGQYWRFFAPMFLHADIVHLAVNCYSIYIIGSQVEKIFGRGRFLAI 272
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y +SGF G S +L SVGASGA+FGL+GA L + L K
Sbjct: 273 YFVSGFIGSAASFAF------SLNSSVGASGAIFGLVGAMLYFSLRRPALL--KSSYGVN 324
Query: 162 LILVIGVNMAIGFM-PGIDNMAHIGGFVAGIL 192
LI ++ +N+A GFM IDN AHIGGFV G L
Sbjct: 325 LITMLVINLAYGFMNKRIDNHAHIGGFVGGFL 356
>gi|401409155|ref|XP_003884026.1| Rhomboid-6, isoform A, related [Neospora caninum Liverpool]
gi|325118443|emb|CBZ53994.1| Rhomboid-6, isoform A, related [Neospora caninum Liverpool]
Length = 646
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 94/170 (55%), Gaps = 13/170 (7%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTN---SLAILFIG 86
S +S P+ L+ LGGL N + E +R F+ M++H +H+L N + IL+I
Sbjct: 317 SLSSWESPNARILRHLGGLETNYIREYSETFRLFTSMYMHGGWMHILINLSCQIQILWI- 375
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
+E D+GF R LL+ L G G LLS + S I+VG+SG+++ LLGA + +
Sbjct: 376 --IEPDWGFWRTTLLFFLGGISGNLLSAVADPCS-----ITVGSSGSMYALLGALIPYCV 428
Query: 147 TNW-TLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
W ++ C+ + M+++VI + + G DN AH+GG + GIL GF
Sbjct: 429 EYWKSIPRPGCILVFMIVVVI-IGILTGMAGFTDNYAHMGGALGGILWGF 477
>gi|297584599|ref|YP_003700379.1| rhomboid protease [Bacillus selenitireducens MLS10]
gi|297143056|gb|ADH99813.1| Rhomboid protease [Bacillus selenitireducens MLS10]
Length = 526
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 93/165 (56%), Gaps = 12/165 (7%)
Query: 36 GPSTATLKKLG-GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
G +T+TL + G + + DGE +RF S M++H +HL NSLA+ F+G +E FG
Sbjct: 211 GSTTSTLTLVEFGAKYDPAILDGEWWRFVSAMFIHIGPLHLFMNSLALFFLGAAVERIFG 270
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
R +Y L+G G + S + D IS GASGA+FGL GA L + + L+
Sbjct: 271 TGRFFGIYFLAGLFGSVASFVFND------NISAGASGAIFGLFGALLYFGVRHKKLFFR 324
Query: 155 KCVSITMLILVI-GVNMAIGF-MPGIDNMAHIGGFVAGILLGFIL 197
++ M ILVI G+N+ GF +P +DN AHIGG + G + I+
Sbjct: 325 ---TMGMNILVILGINLVFGFVVPMVDNGAHIGGLIGGFIASSIV 366
>gi|50345116|ref|NP_001002228.1| inactive rhomboid protein 1 [Danio rerio]
gi|82184057|sp|Q6GMF8.1|RHDF1_DANRE RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|49257555|gb|AAH74097.1| Zgc:91984 [Danio rerio]
Length = 857
Score = 90.1 bits (222), Expect = 7e-16, Method: Composition-based stats.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + I LE+ G+LRI ++Y+LSG G L S +
Sbjct: 654 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 713
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+I +W + + T L+ V+ A G +P
Sbjct: 714 -----PYRAEVGPAGSQFGILACLFVELIQSWQILAQPWRAFTKLLCVVLFLFAFGLLPW 768
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG 214
IDN AHI GF++G L F L PYI+ G
Sbjct: 769 IDNFAHISGFISGFFLSFAFL----------PYISFG 795
>gi|325090543|gb|EGC43853.1| rhomboid protein [Ajellomyces capsulatus H88]
Length = 530
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF ++LHA +IH+ N +A L IG +E G+ R ++Y SG G +L
Sbjct: 277 QWFRFIVPIFLHAGLIHIGFNMMAQLTIGADMERTIGWWRYAVVYFASGIFGFILGANFA 336
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG+LFG+ + +++ +W+ +N + ++++ + ++ +G +PG
Sbjct: 337 PPGIP----STGASGSLFGIFALTFLDLLYSWSSRSNPVKELLIMLITVAISFVLGLLPG 392
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF+ G++LG +L P
Sbjct: 393 LDNFSHIGGFMVGLVLGISVLRSPD 417
>gi|404370657|ref|ZP_10975977.1| hypothetical protein CSBG_02042 [Clostridium sp. 7_2_43FAA]
gi|226913215|gb|EEH98416.1| hypothetical protein CSBG_02042 [Clostridium sp. 7_2_43FAA]
Length = 325
Score = 90.1 bits (222), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 89/161 (55%), Gaps = 14/161 (8%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N+++ GEIYR + +LH +IH+ N A+ IG ++E +G R +YV+S
Sbjct: 172 GAKVNVLINSGEIYRLLTSAFLHGGIIHIFFNMSALNIIGREVEAVYGSKRYIAIYVISA 231
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVS---ITMLI 163
GG ++S L + S ISVGASGA+FGLLGA L + L + + ++
Sbjct: 232 LGGSVVSYLFKPNS-----ISVGASGAIFGLLGAMLI-----FGLKERDKIGKQYMKNIL 281
Query: 164 LVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQY 203
IG+N+ IG +P IDN AH+GG + G + FIL + +
Sbjct: 282 ETIGLNVIIGITIPNIDNFAHLGGLILGTITSFILFKKKNF 322
>gi|225555969|gb|EEH04259.1| DHHC zinc finger membrane protein [Ajellomyces capsulatus G186AR]
Length = 540
Score = 89.7 bits (221), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF ++LHA +IH+ N +A L IG +E G+ R ++Y SG G +L
Sbjct: 287 QWFRFIVPIFLHAGLIHIGFNMMAQLTIGADMERTIGWWRYAVVYFASGIFGFILGANFA 346
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG+LFG+ + +++ +W+ +N + ++++ + ++ +G +PG
Sbjct: 347 PPGIP----STGASGSLFGIFALAFLDLLYSWSSRSNPVKELLIMLITVAISFVLGLLPG 402
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF+ G++LG +L P
Sbjct: 403 LDNFSHIGGFMVGLVLGISVLRSPD 427
>gi|258566790|ref|XP_002584139.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905585|gb|EEP79986.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 489
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 110/224 (49%), Gaps = 43/224 (19%)
Query: 6 CPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGL-------SRNLVVYDGE 58
CP + +DR P+++ +L + L LGG+ S + +
Sbjct: 188 CPDSQSDDRA-----------DPKNQCTL-----SQLCGLGGVQDPRAGGSIDDKPEPNQ 231
Query: 59 IYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG-----FGGGLLS 113
+RF ++LHA +IH+ N LA + IG +E + G+ R ++Y SG FGG +
Sbjct: 232 WFRFIIPIFLHAGLIHIGVNLLAQMIIGADMERNIGWWRFAIVYYASGIFGFVFGGNFAA 291
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
S GASG+LFG+L + E++ W + + +IL + ++ +G
Sbjct: 292 ---------PGIASTGASGSLFGILALCVLELLYKWNTISRPVTYLLTMILAVVISFVLG 342
Query: 174 FMPGIDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
+PG+DN +HIGGF+ G++LG LL LR + G VS PY++
Sbjct: 343 LLPGLDNFSHIGGFLMGLVLGVCLLRSPDTLRERIG-VSTPYLS 385
>gi|67606699|ref|XP_666769.1| F6D8.20 [Cryptosporidium hominis TU502]
gi|54657827|gb|EAL36541.1| F6D8.20 [Cryptosporidium hominis]
Length = 464
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
LFGP + +G L NLV +G++ R F WLH IHL N + +G+ LE +
Sbjct: 153 LFGPPPQVVFDMGALDTNLV-RNGQLARLFWSFWLHTGFIHLFINLSCQIILGIILETRW 211
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
R +LY+L G G L S + IS G+S F LL + ++ NW
Sbjct: 212 VIWRYAILYLLGGISGNLASAV-----LDPCTISAGSSACFFALLAGIIVLLLENWRNSR 266
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
+ + + ++I+ + +++ FM DN AHIGGFVAG+L F
Sbjct: 267 WQFLYVLLVIIASLIGISLSFMSNTDNWAHIGGFVAGLLWSF 308
>gi|154276072|ref|XP_001538881.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413954|gb|EDN09319.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 548
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 82/145 (56%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF ++LHA +IH+ N +A L IG +E G+ R ++Y SG G +L
Sbjct: 295 QWFRFIVPIFLHAGLIHIGFNMMAQLTIGADMERAIGWWRYAVVYFASGIFGFILGANFA 354
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG+LFG+ + +++ +W+ +N + ++++ I ++ +G +PG
Sbjct: 355 PAGIA----STGASGSLFGIFALAFLDLLYSWSSRSNPVKELLIMLITIAISFVLGLLPG 410
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF+ G++LG +L P
Sbjct: 411 LDNFSHIGGFMVGLVLGISVLRSPD 435
>gi|71908004|ref|YP_285591.1| rhomboid-like protein [Dechloromonas aromatica RCB]
gi|71847625|gb|AAZ47121.1| Rhomboid-like protein [Dechloromonas aromatica RCB]
Length = 358
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 93/166 (56%), Gaps = 22/166 (13%)
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
DGE +R S ++LH ++HLL N A+ +G +E +G LR ++Y+ +G G LLS +
Sbjct: 60 DGEWWRLGSALFLHFGILHLLLNMAALWDVGQWVERMYGTLRFAVIYLTAGLTGNLLSLV 119
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITN----------WTLYTNKCVSITMLILV 165
+ +S GASGA+FG+ GA LS + W + + + ++
Sbjct: 120 ----ANAGAAVSGGASGAIFGIYGALLSYLWLERSSIHRGEFRWLFWA--AIGFSGATII 173
Query: 166 IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYI 211
G+ +PGIDN AH+GG++AG+L+G +LL+R + G V+GP +
Sbjct: 174 FGL-----LVPGIDNAAHVGGWIAGVLMG-VLLIRSEPGIVAGPQL 213
>gi|66363006|ref|XP_628469.1| rhomboid family membrane associated protease, 7 transmembrane
domain [Cryptosporidium parvum Iowa II]
gi|46229491|gb|EAK90309.1| rhomboid family membrane associated protease, 7 transmembrane
domain [Cryptosporidium parvum Iowa II]
gi|323508507|dbj|BAJ77147.1| cgd7_3020 [Cryptosporidium parvum]
gi|323510219|dbj|BAJ78003.1| cgd7_3020 [Cryptosporidium parvum]
Length = 464
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 6/162 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
LFGP + +G L NLV +G++ R F WLH IHL N + +G+ LE +
Sbjct: 153 LFGPPPQVVFDMGALDTNLV-RNGQLARLFWSFWLHTGFIHLFINLSCQIILGIILETRW 211
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
R +LY+L G G L S + IS G+S F LL + ++ NW
Sbjct: 212 VIWRYAILYLLGGISGNLASAV-----LDPCTISAGSSACFFALLAGIIVLLLENWRNSR 266
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
+ + + ++I+ + +++ FM DN AHIGGFVAG+L F
Sbjct: 267 WQFLYVLLVIIASLIGISLSFMSNTDNWAHIGGFVAGLLWSF 308
>gi|407927474|gb|EKG20366.1| Peptidase S54 rhomboid [Macrophomina phaseolina MS6]
Length = 557
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 94/176 (53%), Gaps = 8/176 (4%)
Query: 31 ENSLFGPSTATLKKLGGLS----RNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIG 86
N+ G S +L L G++ N ++ + YRF ++LH +IH+ N L + +G
Sbjct: 258 PNTTTGASECSLSTLCGMTGIPESNGELHPNQWYRFIVPIFLHGGLIHIGFNMLVQVTVG 317
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
+E+ G +R L+Y +G G +L + SVGASGA+FG++ +L +++
Sbjct: 318 RDMEKLIGSIRFFLVYFAAGIFGNVLGANYAPNGSP----SVGASGAIFGIIALTLLDLL 373
Query: 147 TNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+W N + ++L + + +G +PG+DN AHIGGF+ G+ LG +L PQ
Sbjct: 374 YHWKERLNPKRELLFIMLDVVIAFVLGLLPGLDNFAHIGGFIMGLGLGISILHSPQ 429
>gi|345564498|gb|EGX47460.1| hypothetical protein AOL_s00083g396 [Arthrobotrys oligospora ATCC
24927]
Length = 482
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 94/175 (53%), Gaps = 7/175 (4%)
Query: 28 PRSENSLFGPSTA-TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIG 86
P + + P A +L++L G ++ D + +RF M++HA +IH+ N L L +G
Sbjct: 205 PNTTTAEINPLAACSLQQLCGF-QDFSTPD-QWWRFILPMFMHAGLIHIAFNLLIQLRLG 262
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
+E + G +R ++Y+ SG G +L + + Q L S GASGALFG+L L ++
Sbjct: 263 TDMEREIGIIRFAIVYISSGIFGFVLG---GNFAPQGL-ASTGASGALFGILALVLLDLF 318
Query: 147 TNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
W + + LI+ ++ +G +PG+DN AHIGGF+ G+ LG + P
Sbjct: 319 YTWKQRESPVKDLIFLIIDFAISFVLGLLPGVDNFAHIGGFLMGLALGLAFMRSP 373
>gi|327352454|gb|EGE81311.1| rhomboid family membrane protein [Ajellomyces dermatitidis ATCC
18188]
Length = 548
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF ++LH+ +IH+ N +A L IG +E G+ R L+Y SG G +L
Sbjct: 299 QWFRFIVPIFLHSGLIHIGFNMMAQLTIGADMERTIGWWRYALVYFASGIFGFILGANFA 358
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG LFG+L + +++ W + ++++ IG++ +G +PG
Sbjct: 359 PAGI----ASTGASGCLFGILALAFLDLLYTWGTRPKPVTELVVMLITIGISFVLGLLPG 414
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF+ G++LG +L P
Sbjct: 415 LDNFSHIGGFLVGLVLGISVLRSPD 439
>gi|270012402|gb|EFA08850.1| hypothetical protein TcasGA2_TC006551 [Tribolium castaneum]
Length = 1455
Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 23/186 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR ++ ++LHA V+ L L F+ LE+ G LRIG++Y+ SG G L S +
Sbjct: 1247 QFYRLWTSLFLHAGVLQLAVTVLIQYFLMRDLEKLTGSLRIGIIYIGSGVAGNLASAIFV 1306
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL + E++ +W + + ++ L+ + V IG +P
Sbjct: 1307 -----PYRADVGPAGSQFGLLACLIVEVLNSWPMLKHPNQALCKLLSITLVLFLIGLLPW 1361
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWV--IS 235
+DN AH+ GFV G LL + LL P+I+ G KK L+WV +S
Sbjct: 1362 VDNYAHLFGFVFGFLLSYALL----------PFISFGVYERRKKI------VLIWVCLVS 1405
Query: 236 VVVLFV 241
VLF+
Sbjct: 1406 AGVLFI 1411
>gi|91089053|ref|XP_970266.1| PREDICTED: similar to rhomboid [Tribolium castaneum]
Length = 1486
Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats.
Identities = 60/186 (32%), Positives = 94/186 (50%), Gaps = 23/186 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR ++ ++LHA V+ L L F+ LE+ G LRIG++Y+ SG G L S +
Sbjct: 1278 QFYRLWTSLFLHAGVLQLAVTVLIQYFLMRDLEKLTGSLRIGIIYIGSGVAGNLASAIFV 1337
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL + E++ +W + + ++ L+ + V IG +P
Sbjct: 1338 -----PYRADVGPAGSQFGLLACLIVEVLNSWPMLKHPNQALCKLLSITLVLFLIGLLPW 1392
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWV--IS 235
+DN AH+ GFV G LL + LL P+I+ G KK L+WV +S
Sbjct: 1393 VDNYAHLFGFVFGFLLSYALL----------PFISFGVYERRKKI------VLIWVCLVS 1436
Query: 236 VVVLFV 241
VLF+
Sbjct: 1437 AGVLFI 1442
>gi|325289903|ref|YP_004266084.1| rhomboid family protein [Syntrophobotulus glycolicus DSM 8271]
gi|324965304|gb|ADY56083.1| Rhomboid family protein [Syntrophobotulus glycolicus DSM 8271]
Length = 189
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 89/151 (58%), Gaps = 9/151 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ G+ +R + +++H ++HLL NS A++ +G E FG L+ LLY+LSG
Sbjct: 42 GAKVNQLIDLGQYWRLLTSIFIHIGIVHLLLNSYALIAVGQISEAVFGHLKFALLYLLSG 101
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
GG S L + IS GASGA+FGLLGA +S N ++ + ++ L+ VI
Sbjct: 102 IGGATASYLFSEA------ISAGASGAIFGLLGALVSYGWKNAGMWRSGLIA--NLLFVI 153
Query: 167 GVNMAIGFM-PGIDNMAHIGGFVAGILLGFI 196
G N+ G + GIDN AHIGG + G+++G I
Sbjct: 154 GFNILFGLITTGIDNYAHIGGMLTGLIIGII 184
>gi|239607465|gb|EEQ84452.1| rhomboid family membrane protein [Ajellomyces dermatitidis ER-3]
Length = 515
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 79/145 (54%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF ++LH+ +IH+ N +A L IG +E G+ R L+Y SG G +L
Sbjct: 295 QWFRFIVPIFLHSGLIHIGFNMMAQLTIGADMERTIGWWRYALVYFASGIFGFILGANFA 354
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG LFG+L + +++ W + ++++ IG++ +G +PG
Sbjct: 355 PAGI----ASTGASGCLFGILALAFLDLLYTWGTRPKPVTELVVMLITIGISFVLGLLPG 410
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF+ G++LG +L P
Sbjct: 411 LDNFSHIGGFLVGLVLGISVLRSPD 435
>gi|156094408|ref|XP_001613241.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802115|gb|EDL43514.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 593
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 92/170 (54%), Gaps = 5/170 (2%)
Query: 29 RSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVK 88
R E+S +T +LGGL+ N + GE+YR F ++LH +H++ N + + I
Sbjct: 263 RGESSWDSVNTRVYNQLGGLNTNYIRNYGELYRLFWSVYLHGGFMHIIFNVICQIQILWM 322
Query: 89 LEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITN 148
+E D+GFLR +L+ SG G LLS + +++G+SGAL+GL+GA + I
Sbjct: 323 IEPDWGFLRTMMLFFTSGVTGNLLSAVC-----DPCGVTIGSSGALYGLIGALFTYYIEY 377
Query: 149 WTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
W C + +++VI + IG DN AH+GG + GIL GF +
Sbjct: 378 WKTIPRPCCVLIFMVIVIIFGIFIGMFGYTDNYAHMGGCLGGILYGFATI 427
>gi|344302219|gb|EGW32524.1| hypothetical protein SPAPADRAFT_61590 [Spathaspora passalidarum
NRRL Y-27907]
Length = 555
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 116/235 (49%), Gaps = 27/235 (11%)
Query: 28 PRSENSLFGPSTATLKKLGGLS-----RNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAI 82
P + ++ L +L GLS +N + D + YR F ++LHA +H++ N L
Sbjct: 172 PCANSTTVDTYVCNLAELCGLSGIPIEKNAFIPD-QWYRIFIPIFLHAGFLHIIFNLLLQ 230
Query: 83 LFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASL 142
+ +G +E + G L+ ++Y+ SG G LL S GASGALFG++ ++
Sbjct: 231 VTMGGSIERNIGILKYAIIYIASGIAGFLLGA----NFTPVGIASTGASGALFGIVATNM 286
Query: 143 SEII----TNWTLYTNKCVSITMLILV--IGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+ N +Y K ++ + I++ I V+ +G +PG+DN +HIGGF GIL+ +
Sbjct: 287 ILFVYTGKKNTNMYGTKHYTLFIFIMIGEIVVSFVLGLLPGLDNFSHIGGFAMGILMAIV 346
Query: 197 LLLRPQYGYVSGPYI-APGYE-----LNHKKPKYQCHQKL-----LWVISVVVLF 240
L P + YV G + G + ++H P Y K+ +W+ + VV F
Sbjct: 347 FLKDPYWVYVDGIIVYRKGRDTLQQFIDHWNPMYAIEDKIRTRFYIWIGARVVAF 401
>gi|217077443|ref|YP_002335161.1| integral membrane protein, Rhomboid family [Thermosipho africanus
TCF52B]
gi|217037298|gb|ACJ75820.1| integral membrane protein, Rhomboid family [Thermosipho africanus
TCF52B]
Length = 223
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 10/175 (5%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
F P+ A L + G +V G+ +R + M++H IHL+ N A+ F+G +E
Sbjct: 24 KFFIPNEAVLYLMFGAQYGPLVSHGQWFRIVTSMFVHGGFIHLIFNMYALFFLGRIVENV 83
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
+G + Y LSG G L + + S SVGASGA+FGL+G + T Y
Sbjct: 84 YGTEKFLTFYFLSGIVGNLATQIFYYNS-----FSVGASGAIFGLIGVLFAAGFRKDTPY 138
Query: 153 TNKCVSITMLILVIGVNMAIGFMPG--IDNMAHIGGFVAGILLGFILLLRPQYGY 205
+ K ++ + L+ +I +N+ G MPG I+N AHIGGF+ G+LLG+++ P Y Y
Sbjct: 139 SLKPITGSALLPMIVINIIFGIMPGTNINNAAHIGGFLTGMLLGYMI---PLYDY 190
>gi|419760008|ref|ZP_14286293.1| integral membrane protein, Rhomboid family [Thermosipho africanus
H17ap60334]
gi|407515047|gb|EKF49833.1| integral membrane protein, Rhomboid family [Thermosipho africanus
H17ap60334]
Length = 223
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 10/175 (5%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
F P+ A L + G +V G+ +R + M++H IHL+ N A+ F+G +E
Sbjct: 24 KFFIPNEAVLYLMFGAQYGPLVSHGQWFRIVTSMFVHGGFIHLIFNMYALFFLGRIVENV 83
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
+G + Y LSG G L + + S SVGASGA+FGL+G + T Y
Sbjct: 84 YGTEKFLTFYFLSGIVGNLATQIFYYNS-----FSVGASGAIFGLIGVLFAAGFRKDTPY 138
Query: 153 TNKCVSITMLILVIGVNMAIGFMPG--IDNMAHIGGFVAGILLGFILLLRPQYGY 205
+ K ++ + L+ +I +N+ G MPG I+N AHIGGF+ G+LLG+++ P Y Y
Sbjct: 139 SLKPITGSALLPMIVINIIFGIMPGTNINNAAHIGGFLTGMLLGYMI---PLYDY 190
>gi|402298353|ref|ZP_10818053.1| rhomboid protein membrane-associated serine peptidase [Bacillus
alcalophilus ATCC 27647]
gi|401726454|gb|EJS99682.1| rhomboid protein membrane-associated serine peptidase [Bacillus
alcalophilus ATCC 27647]
Length = 519
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 18/176 (10%)
Query: 33 SLFGPSTA--TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
L+G S + TL ++G L++ DGE +R + M++H +HLL NSLA+ F+G +E
Sbjct: 207 ELYGDSESILTLVEVGAKYSPLIL-DGEWWRIITSMFIHIGFLHLLMNSLALYFLGTLVE 265
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
+G R +Y +G G L+S L I GASGA+FGL GA L +
Sbjct: 266 RIYGSFRFVFIYFTAGVIGTLVSFW------MNLSIGAGASGAIFGLFGALLY-----FG 314
Query: 151 LYTNKCVSITM---LILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
L K TM +++V+ +N+A GF+ P +DN AH+GG + G L +++ L Q
Sbjct: 315 LNYRKLFFRTMGANVLIVLAINLAFGFLIPVVDNSAHVGGLIGGFLAAYVIQLPKQ 370
>gi|330924089|ref|XP_003300510.1| hypothetical protein PTT_11758 [Pyrenophora teres f. teres 0-1]
gi|311325347|gb|EFQ91395.1| hypothetical protein PTT_11758 [Pyrenophora teres f. teres 0-1]
Length = 545
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF + ++LHA +IH+ N L +G +E++ G LR L+Y +G G +L +
Sbjct: 267 QWWRFITPIFLHAGIIHIGFNMLLQWTLGRDMEKEIGPLRFLLVYFSAGIFGFVLGGNYA 326
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
E SVG SG+LFG+L ++ +++ NW+ + + L+L + + IG +PG
Sbjct: 327 PEGL----TSVGCSGSLFGILALTMLDLLYNWSTRRSPVKDLLFLLLDMAIAFVIGLLPG 382
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF G++LG ++ PQ
Sbjct: 383 LDNFSHIGGFCMGLVLGICIIHSPQ 407
>gi|448112251|ref|XP_004202049.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
gi|359465038|emb|CCE88743.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
Length = 578
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 108/224 (48%), Gaps = 29/224 (12%)
Query: 41 TLKKLGGLSRNLVVYDG------EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
+L +L GLS V DG + YR + ++LHA IH++ N L +G +E G
Sbjct: 311 SLSQLCGLSG--VPEDGSKYKPHQWYRIVTPIFLHAGFIHIIFNLLLQTTMGATIERHIG 368
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII----TNWT 150
F++ L+Y+ SG G LL + S GASGALFG+L A L I N
Sbjct: 369 FIKYFLIYMPSGIAGFLLGSNFSPDGIA----STGASGALFGILAADLIMFIYCGRKNTN 424
Query: 151 LYTNKCVSI--TMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+Y K + T L+ I ++ +G +PG+DN +HIGGF GIL +L+ P + YV G
Sbjct: 425 IYGTKKFGLFLTFLVAEIIISFVLGLLPGMDNFSHIGGFAMGILTSVVLIPDPFFIYVDG 484
Query: 209 PYIAPGYE------LNHKKPKYQCHQKL-----LWVISVVVLFV 241
++ LN+ P Y K+ LW + +V V
Sbjct: 485 IITYNAHDNTAQQFLNNWNPFYHYEDKIPYRFYLWCVVRIVCLV 528
>gi|119175195|ref|XP_001239866.1| hypothetical protein CIMG_09487 [Coccidioides immitis RS]
gi|392870060|gb|EAS28616.2| DHHC zinc finger membrane protein [Coccidioides immitis RS]
Length = 485
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 14/150 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG-----FGGGLL 112
+ +RF ++LHA +IH+ N LA L IG +E G+ R ++Y SG FGG
Sbjct: 235 QWFRFIIPIFLHAGLIHIGVNLLAQLVIGADMERSIGWWRFAIIYYASGIFGFVFGGNFA 294
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAI 172
+ S GASG+LFG+L + +++ W + M+IL + ++ +
Sbjct: 295 A---------PGIASTGASGSLFGILALCVLDLLYKWNSIRRPMTYLLMMILAVAISFVL 345
Query: 173 GFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
G +PG+DN +HIGGF+ G+ LG L+ P
Sbjct: 346 GLLPGLDNFSHIGGFLMGLALGICLMRSPD 375
>gi|303314767|ref|XP_003067392.1| Rhomboid family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240107060|gb|EER25247.1| Rhomboid family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320037727|gb|EFW19664.1| rhomboid family membrane protein [Coccidioides posadasii str.
Silveira]
Length = 485
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 14/150 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG-----FGGGLL 112
+ +RF ++LHA +IH+ N LA L IG +E G+ R ++Y SG FGG
Sbjct: 235 QWFRFIIPIFLHAGLIHIGVNLLAQLVIGADMERSIGWWRFAIIYYASGIFGFVFGGNFA 294
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAI 172
+ S GASG+LFG+L + +++ W + M+IL + ++ +
Sbjct: 295 A---------PGIASTGASGSLFGILALCVLDLLYKWNSIRRPMTYLLMMILAVAISFVL 345
Query: 173 GFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
G +PG+DN +HIGGF+ G+ LG L+ P
Sbjct: 346 GLLPGLDNFSHIGGFLMGLALGICLMRSPD 375
>gi|317128371|ref|YP_004094653.1| Rhomboid protease [Bacillus cellulosilyticus DSM 2522]
gi|315473319|gb|ADU29922.1| Rhomboid protease [Bacillus cellulosilyticus DSM 2522]
Length = 524
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 97/179 (54%), Gaps = 17/179 (9%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
ST TL G N ++ GE +RFFS M+LH HL+ NSLA+ ++G +E +G R
Sbjct: 212 STETLISFGA-KFNPLILQGEWWRFFSAMFLHIGFFHLMMNSLALFYLGSAVERIYGTGR 270
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
++Y+++G G + S + Q+S GASGA+FG GA L I + L+
Sbjct: 271 FLIIYLIAGLVGSIASFALNE------QVSAGASGAIFGCFGALLYFGIKHKRLFFR--- 321
Query: 158 SITM---LILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIA 212
TM +I+++ +N+A GF+ P IDN AHIGG + G I+ L P+ V IA
Sbjct: 322 --TMGMNVIVILSINLAFGFIVPMIDNGAHIGGLIGGFAASAIVSL-PRNKNVKSQIIA 377
>gi|320162418|ref|YP_004175643.1| rhomboid family protein [Anaerolinea thermophila UNI-1]
gi|319996272|dbj|BAJ65043.1| rhomboid family protein [Anaerolinea thermophila UNI-1]
Length = 258
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 79/145 (54%), Gaps = 7/145 (4%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +R + M+LH ++ H+ N A+ GV LE +G R LLY + G
Sbjct: 69 GAKSNTLIQQGEFWRLITPMFLHVSLPHIAFNMYALYAFGVSLERHYGRRRFLLLYFIGG 128
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVS-ITMLILV 165
GG +LS L E+ S GAS ALFG++ A + N + + VS + + +
Sbjct: 129 LGGVVLSYLLSPEN------SAGASTALFGVVAAEAVFLYYNRRWFGKEAVSALWNTVFI 182
Query: 166 IGVNMAIGFMPGIDNMAHIGGFVAG 190
IG+N+ +G PGIDN H+GG +AG
Sbjct: 183 IGINLVLGLSPGIDNWGHLGGLIAG 207
>gi|317500904|ref|ZP_07959115.1| rhomboid protease GluP [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089196|ref|ZP_08338098.1| hypothetical protein HMPREF1025_01681 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439355|ref|ZP_08618969.1| hypothetical protein HMPREF0990_01363 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316897702|gb|EFV19762.1| rhomboid protease GluP [Lachnospiraceae bacterium 8_1_57FAA]
gi|330405748|gb|EGG85277.1| hypothetical protein HMPREF1025_01681 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336016163|gb|EGN45955.1| hypothetical protein HMPREF0990_01363 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 200
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
A + + G + + E YR F+CM+LH + HL+ N + + +G LE + G L
Sbjct: 31 EDAAFMLQHGAMYEPFITEGQEYYRIFTCMFLHFGITHLMNNMVMLGALGWNLELEIGKL 90
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW----TLY 152
R ++Y LSG GG +LS + + ++ +S GASGA+FGL+GA L +I N L
Sbjct: 91 RFIIIYFLSGIGGNILSLIAAISAGES-AVSAGASGAVFGLMGALLYVVIANRGRLGQLS 149
Query: 153 TNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ + +L L G+ + G+DNMAHIGG + G + ++L RP+
Sbjct: 150 GRGMIFMVVLSLYFGLTSS-----GVDNMAHIGGLICGFIFA-VILYRPK 193
>gi|433462194|ref|ZP_20419783.1| S54 family peptidase [Halobacillus sp. BAB-2008]
gi|432189083|gb|ELK46216.1| S54 family peptidase [Halobacillus sp. BAB-2008]
Length = 510
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 89/160 (55%), Gaps = 15/160 (9%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N + +GE +R + M+LH +IHL+ N LA+ +IG +E +G R ++Y+L+G
Sbjct: 214 GAKFNPAIMEGEWWRLVTSMFLHIGLIHLMMNMLALYYIGTAVERIYGSWRYIIIYLLAG 273
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM---LI 163
G + S + Q+S GASGA+FGL GA L + N L+ TM L+
Sbjct: 274 VFGSVASFMLNP------QVSAGASGAIFGLFGALLYFGVWNRRLFFQ-----TMGWNLL 322
Query: 164 LVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+IG+N+A G F+P IDN AH+GG + G + I L Q
Sbjct: 323 FIIGLNIAFGLFVPQIDNGAHMGGLIGGFIAAAISQLPKQ 362
>gi|91776194|ref|YP_545950.1| rhomboid-like protein [Methylobacillus flagellatus KT]
gi|91710181|gb|ABE50109.1| Rhomboid-like protein [Methylobacillus flagellatus KT]
Length = 356
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 91/179 (50%), Gaps = 25/179 (13%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
P+ L+ G + DGE +R F+ ++LH +HL N +A G +E +G
Sbjct: 50 PNNVQLQLAWGANFGPATQDGEWWRLFTALFLHFGAVHLALNMIAFWDGGQLVERMYGHW 109
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLG----------ASLSEII 146
R ++Y++SG G LLS + Q +S GASGA+FG+ G A L
Sbjct: 110 RYLVIYLVSGLVGNLLSLVWQGNQ----AVSGGASGAIFGIYGALIVFLWQERALLDRRE 165
Query: 147 TNWTLYTNKCVSITMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILL--LRPQ 202
W L+ CV T I A+GFM P IDN AHIGGFVAG+L G +L+ LRPQ
Sbjct: 166 FRW-LFGGACVFATATI-------ALGFMIPAIDNAAHIGGFVAGMLAGLLLMRGLRPQ 216
>gi|326672347|ref|XP_691851.4| PREDICTED: rhomboid family member 1-like [Danio rerio]
Length = 909
Score = 88.2 bits (217), Expect = 2e-15, Method: Composition-based stats.
Identities = 57/184 (30%), Positives = 89/184 (48%), Gaps = 23/184 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + I LE+ G+LRI ++Y+LSG G L S +
Sbjct: 706 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 765
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + T L V+ A G +P
Sbjct: 766 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFTKLSCVVLFLFAFGLLPW 820
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GFV+G L F L PYI+ G + ++K L ++ +
Sbjct: 821 IDNFAHICGFVSGFFLSFAFL----------PYISFG--------RMDMYRKRLQILVAL 862
Query: 238 VLFV 241
LFV
Sbjct: 863 TLFV 866
>gi|153815443|ref|ZP_01968111.1| hypothetical protein RUMTOR_01678 [Ruminococcus torques ATCC 27756]
gi|145847302|gb|EDK24220.1| peptidase, S54 family [Ruminococcus torques ATCC 27756]
Length = 175
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 11/170 (6%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
A + + G + + E YR F+CM+LH + HL+ N + + +G LE + G L
Sbjct: 6 EDAAFMLQHGAMYEPFITEGQEYYRIFTCMFLHFGITHLMNNMVMLGALGWNLELEIGKL 65
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW----TLY 152
R ++Y LSG GG +LS + + ++ +S GASGA+FGL+GA L +I N L
Sbjct: 66 RFIIIYFLSGIGGNILSLIAAISAGES-AVSAGASGAVFGLMGALLYVVIANRGRLGQLS 124
Query: 153 TNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ + +L L G+ + G+DNMAHIGG + G + ++L RP+
Sbjct: 125 GRGMIFMVVLSLYFGLTSS-----GVDNMAHIGGLICGFIFA-VILYRPK 168
>gi|189207869|ref|XP_001940268.1| rhomboid family membrane protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976361|gb|EDU42987.1| rhomboid family membrane protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 542
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF + ++LHA +IH+ N L +G +E++ G LR L+Y +G G +L +
Sbjct: 265 QWWRFITPIFLHAGLIHIGFNMLLQWTLGRDMEKEIGPLRFLLVYFSAGIFGFVLGGNYA 324
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
E SVG SG+LFG+L ++ +++ NW+ + + L+L + + IG +PG
Sbjct: 325 PEGL----TSVGCSGSLFGILALTMLDLLYNWSTRRSPVKDLLFLLLDMAIAFVIGLLPG 380
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF G++LG ++ PQ
Sbjct: 381 LDNFSHIGGFCMGLVLGICIIHSPQ 405
>gi|403331557|gb|EJY64731.1| Rhomboid family protein [Oxytricha trifallax]
Length = 278
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/183 (32%), Positives = 93/183 (50%), Gaps = 11/183 (6%)
Query: 20 HLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNS 79
++ +++ S N L P + L G + Y +++RF ++LHA+ +HL +N
Sbjct: 57 YIASVAYKGISNNGLLAPQSEALFDFGQKYPYYMRYQYQVWRFIMPIFLHADFVHLTSNI 116
Query: 80 LAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLG 139
+ G LE GF +LY LSG GG L S L D + SVGAS A+FGL+G
Sbjct: 117 FSQFVFGSYLESTIGFFNFTILYFLSGIGGILFSSLASDAT------SVGASTAIFGLMG 170
Query: 140 ASLSEIITNW-TLYTNKCVSITMLI-LVIGVNMAIGFMPG---IDNMAHIGGFVAGILLG 194
+ + +I NW L T+ I L+IG+ M + ID++ H+GGF+ G++L
Sbjct: 171 SFAAYLIVNWKNLERQPQQKYTIAIFLIIGLLMNLTQAQSNSKIDSIGHLGGFLTGLILS 230
Query: 195 FIL 197
L
Sbjct: 231 LFL 233
>gi|261200367|ref|XP_002626584.1| rhomboid family membrane protein [Ajellomyces dermatitidis
SLH14081]
gi|239593656|gb|EEQ76237.1| rhomboid family membrane protein [Ajellomyces dermatitidis
SLH14081]
Length = 516
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF ++LH+ +IH+ N +A L IG +E G+ R L+Y SG G +L
Sbjct: 299 QWFRFIVPIFLHSGLIHIGFNMMAQLTIGADMERTIGWWRYALVYFASGIFGFILGANFA 358
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG LFG+ + +++ W + ++++ IG++ +G +PG
Sbjct: 359 PAGI----ASTGASGCLFGIFALAFLDLLYTWGTRPKPVTELVVMLITIGISFVLGLLPG 414
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF+ G++LG +L P
Sbjct: 415 LDNFSHIGGFLVGLVLGISVLRSPD 439
>gi|121716844|ref|XP_001275927.1| DHHC zinc finger membrane protein [Aspergillus clavatus NRRL 1]
gi|119404084|gb|EAW14501.1| DHHC zinc finger membrane protein [Aspergillus clavatus NRRL 1]
Length = 526
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 86/160 (53%), Gaps = 9/160 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LH +IH+ N L + +G +E G+ R +Y+ SG G +L +
Sbjct: 251 QWFRFIIPMFLHTGIIHIGFNLLVQMTMGADMERTVGWWRYAFVYLASGIWGFVLGGNYA 310
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ + S G SG+LFG+L + +++ W + + ++++ IG++ +G +PG
Sbjct: 311 AQGES----SCGCSGSLFGILALYILDLLYTWNERASPLTELIIMVIGIGISFVLGLLPG 366
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
+DN +HIGGFV G+ G ++ LR + G PY+A
Sbjct: 367 LDNFSHIGGFVMGLASGLCIMRSPNALRERIGLARNPYVA 406
>gi|440748391|ref|ZP_20927644.1| Rhomboid family protein [Mariniradius saccharolyticus AK6]
gi|436483215|gb|ELP39283.1| Rhomboid family protein [Mariniradius saccharolyticus AK6]
Length = 517
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 84/154 (54%), Gaps = 7/154 (4%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G +R G+ +R S M+LH ++HL N ++ + +E FG ++ +LY SG
Sbjct: 352 GANRRSETTGGDWWRLVSSMFLHGGIMHLFLNIYGLVIAALFVEPVFGRIKYFILYFASG 411
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLI-LV 165
G L S + + ISVGASGA+FGL GA L ++TN + + I M I
Sbjct: 412 ICGSLASIYWYENT-----ISVGASGAIFGLYGAVLGLLLTN-AFPKDGKIGILMFIGPY 465
Query: 166 IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLL 199
+GVN+ +G GIDN AHIGG V+G + G IL L
Sbjct: 466 VGVNLLVGLTGGIDNAAHIGGLVSGAVFGIILYL 499
>gi|209876404|ref|XP_002139644.1| rhomboid family protein [Cryptosporidium muris RN66]
gi|209555250|gb|EEA05295.1| rhomboid family protein [Cryptosporidium muris RN66]
Length = 469
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
S+NSL GP + +G L NL+ G+I R F WLH ++HL N L+ + +GV L
Sbjct: 141 SDNSLLGPPAQVIFNMGALDTNLI-RQGQISRLFWSFWLHTGLLHLAINVLSQIALGVIL 199
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E + R +LY + G G L S + S IS G+S F LL + ++ NW
Sbjct: 200 ETRWVVWRYIILYYIGGLVGNLASAVLDPCS-----ISAGSSACFFALLAGVIVMLLENW 254
Query: 150 TLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGIL 192
+ + + L + +++ FM DN AHIGGF AG L
Sbjct: 255 KHTNWQFFYVISICLATLLGISLSFMSNTDNWAHIGGFTAGFL 297
>gi|138896022|ref|YP_001126475.1| hypothetical protein GTNG_2385 [Geobacillus thermodenitrificans
NG80-2]
gi|134267535|gb|ABO67730.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
Length = 386
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 15/150 (10%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +RF + M+LH +HLLTN+ A+ ++G+ +E +G LR L+Y +G
Sbjct: 212 GAKFNPLIEMGEWWRFLTPMFLHIGFLHLLTNTFALYYLGITVERLYGSLRFLLIYTTAG 271
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN---KCVSITMLI 163
F G L S L T IS GASGA+FGL GA ++ T+Y + + + + ++
Sbjct: 272 FFGTLASFLF------TPSISAGASGAIFGLFGA----LLYFGTVYRHLFFRTMGMNVVS 321
Query: 164 LVIGVNMAIGFM-PGIDNMAHIGGFVAGIL 192
L++ VN+ G + PGIDN HIGG V G L
Sbjct: 322 LIV-VNLLFGLLVPGIDNAGHIGGLVGGFL 350
>gi|431793836|ref|YP_007220741.1| hypothetical protein Desdi_1896 [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784062|gb|AGA69345.1| putative membrane protein [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 321
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/149 (40%), Positives = 86/149 (57%), Gaps = 9/149 (6%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +R F+ M+LH VIHL N A+ +G LEE FG +R L+Y+ SG
Sbjct: 175 GAKVNSLILQGEYWRLFTSMFLHIGVIHLAFNLYALWALGPILEELFGRIRYLLIYISSG 234
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
G S L D IS GASGA+FG+LGA + + + + K L++++
Sbjct: 235 VMGSAASFLFTDA------ISAGASGAIFGILGALV--VYSRSKPFLWKSGFGKNLVIIV 286
Query: 167 GVNMAIG-FMPGIDNMAHIGGFVAGILLG 194
+N++IG F PGID AHIGG ++G+LL
Sbjct: 287 LINLSIGFFQPGIDVYAHIGGLLSGMLLA 315
>gi|397642301|gb|EJK75152.1| hypothetical protein THAOC_03139 [Thalassiosira oceanica]
Length = 399
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 95/183 (51%), Gaps = 23/183 (12%)
Query: 28 PRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGV 87
P S N + GP TL G + L+V DGE+YR + ++LHA +IHLL N + +G
Sbjct: 136 PLSINPMIGPYPDTLNYWGAKNAVLIVEDGELYRLVTPIFLHAGLIHLLGNVMVQAEVGN 195
Query: 88 KLEEDFGFLRIGLLYVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEII 146
+ E+++G + ++Y+ S G + S C D ISVG+SGA+ GL GA SEI
Sbjct: 196 RWEKEWGSVIWMIIYMGSAVGSSIASTCFMPD------NISVGSSGAVMGLFGAKFSEIF 249
Query: 147 TNWTLYTNKCVSITML----------ILVIG---VNMAIGFMPGIDNMAHIGGFVAGILL 193
L + SI L LV+G + + F+P +D AH+GG VAG +L
Sbjct: 250 ---LLCCERSRSIRDLAAEKARKRQVCLVVGGLIIVSLMSFIPYVDWAAHLGGMVAGFVL 306
Query: 194 GFI 196
G +
Sbjct: 307 GLV 309
>gi|153853648|ref|ZP_01995028.1| hypothetical protein DORLON_01019 [Dorea longicatena DSM 13814]
gi|149753803|gb|EDM63734.1| peptidase, S54 family [Dorea longicatena DSM 13814]
Length = 204
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 100/185 (54%), Gaps = 10/185 (5%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SF +E+ F + K G + ++ GE YR FS M+LH HL+ N + ++
Sbjct: 26 SFLGMTEDGEF------MLKHGAMYVPYLIQRGEYYRLFSSMFLHFGYDHLVNNMIVLVA 79
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G LE D G ++ ++Y +SG G +LS D ++ IS GASGA+FG++GA L
Sbjct: 80 MGWNLELDIGKVKFLIVYFVSGLAGNVLSA-WWDIQTGSMAISAGASGAIFGIIGALLYV 138
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRPQY 203
I N + +S L+ +I + + GF G+DNMAHIGG +AG L G +L + +
Sbjct: 139 AIRNRGRIGD--ISGRGLVFMIVLTLYYGFTSGGVDNMAHIGGLLAGFLSGVLLYRKRKD 196
Query: 204 GYVSG 208
Y +G
Sbjct: 197 KYRTG 201
>gi|196248915|ref|ZP_03147615.1| Rhomboid family protein [Geobacillus sp. G11MC16]
gi|196211791|gb|EDY06550.1| Rhomboid family protein [Geobacillus sp. G11MC16]
Length = 390
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 15/150 (10%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +RF + M+LH +HLLTN+ A+ ++G+ +E +G LR L+Y +G
Sbjct: 216 GAKFNPLIEMGEWWRFLTPMFLHIGFLHLLTNTFALYYLGITVERLYGSLRFLLIYATAG 275
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN---KCVSITMLI 163
F G L S L T IS GASGA+FGL GA ++ T+Y + + + + ++
Sbjct: 276 FFGTLASFLF------TPSISAGASGAIFGLFGA----LLYFGTVYRHLFFRTMGMNVIS 325
Query: 164 LVIGVNMAIGFM-PGIDNMAHIGGFVAGIL 192
L++ VN+ G + PGIDN HIGG V G L
Sbjct: 326 LIV-VNLLFGLLVPGIDNAGHIGGLVGGFL 354
>gi|296416368|ref|XP_002837852.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633736|emb|CAZ82043.1| unnamed protein product [Tuber melanosporum]
Length = 551
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 87/175 (49%), Gaps = 13/175 (7%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YRF + ++LHA +IH+ N L L +G ++E D G LR ++Y F G+ +
Sbjct: 274 QWYRFITPIFLHAGLIHIAFNMLVQLKLGTEMERDIGHLRFAIVY----FAAGIFGFVFG 329
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
Q S G SG+LFG+ L +++ W + + L++ I + IG +PG
Sbjct: 330 GNFAPNGQPSTGCSGSLFGIFALMLLDLLWTWGSRKSPKKDLAFLLVEIIICFVIGLLPG 389
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIAPGYELNHKKPKYQCH 227
+DN +HIGGF+ G+ LG +L +R + G PY + +P Y +
Sbjct: 390 LDNFSHIGGFLMGLFLGLTVLHSPPSIRQKIGAGEPPYT----PMTTNRPPYAAN 440
>gi|212530860|ref|XP_002145587.1| rhomboid family membrane protein [Talaromyces marneffei ATCC 18224]
gi|210074985|gb|EEA29072.1| rhomboid family membrane protein [Talaromyces marneffei ATCC 18224]
Length = 529
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 83/146 (56%), Gaps = 4/146 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LHA ++H+ N L + +G +E G+ R L+Y SG G ++ +
Sbjct: 260 QWFRFIVPMFLHAGLVHIGFNMLMQMTVGADMERRIGWWRYALVYFSSGIFGFVMGGNYA 319
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ S GASGALFGL+ SL +++ W + V + LI+ IGV+ +G +PG
Sbjct: 320 AQGIS----STGASGALFGLVALSLLDLLYTWGERRSPWVELIFLIIEIGVSFVLGLLPG 375
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQY 203
+DN +HIGGF+ G+ +G ++ P Y
Sbjct: 376 LDNFSHIGGFIMGLAMGLCMMRSPNY 401
>gi|297529385|ref|YP_003670660.1| rhomboid family protein [Geobacillus sp. C56-T3]
gi|297252637|gb|ADI26083.1| Rhomboid family protein [Geobacillus sp. C56-T3]
Length = 386
Score = 87.8 bits (216), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 15/150 (10%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +R + M+LH +HLLTN+LA+ ++G+ +E +G LR +YV +G
Sbjct: 212 GAKFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAG 271
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN---KCVSITMLI 163
F G L S L T +S GASGA+FGL GA ++ T+Y + + + + ++
Sbjct: 272 FFGALASFLF------TPSLSAGASGAIFGLFGA----LLYFGTVYRHLFFRTMGMNVIS 321
Query: 164 LVIGVNMAIGFM-PGIDNMAHIGGFVAGIL 192
L+I VN+ G + PGIDN HIGG V G L
Sbjct: 322 LII-VNLLFGLLVPGIDNAGHIGGLVGGFL 350
>gi|56420981|ref|YP_148299.1| hypothetical protein GK2446 [Geobacillus kaustophilus HTA426]
gi|56380823|dbj|BAD76731.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 390
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 15/150 (10%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +R + M+LH +HLLTN+LA+ ++G+ +E +G LR +YV +G
Sbjct: 216 GAKFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAG 275
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN---KCVSITMLI 163
F G L S L T +S GASGA+FGL GA ++ T+Y + + + + ++
Sbjct: 276 FFGALASFLF------TPSLSAGASGAIFGLFGA----LLYFGTVYRHLFFRTMGMNVIS 325
Query: 164 LVIGVNMAIGFM-PGIDNMAHIGGFVAGIL 192
L+I VN+ G + PGIDN HIGG V G L
Sbjct: 326 LII-VNLLFGLLVPGIDNAGHIGGLVGGFL 354
>gi|226289269|gb|EEH44781.1| DHHC zinc finger membrane protein [Paracoccidioides brasiliensis
Pb18]
Length = 519
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 19/190 (10%)
Query: 28 PRSENS--LFGPSTATLKKLGGLSRNLVVYD-------------GEIYRFFSCMWLHANV 72
PRS +S + + TL +L G S+ V D + +RF M+LHA +
Sbjct: 227 PRSTSSDPISPENQCTLSELCGFSKRHRVPDPKPNGSIKQKPEPNQWFRFIVPMFLHAGL 286
Query: 73 IHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASG 132
+H+ N +A L IG +E G+ R ++Y SG G +L + S GASG
Sbjct: 287 VHIGFNMMAQLTIGADMERTIGWWRYAIVYFASGIFGFILGA----NFAASGIASTGASG 342
Query: 133 ALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGIL 192
L G+L + ++ W + ++++ I ++ +G +PG+DN +HIGGF+ G++
Sbjct: 343 CLSGILALACLDLFYTWGSRPKPVTELIIMLITIAISFVLGLLPGLDNFSHIGGFLVGLV 402
Query: 193 LGFILLLRPQ 202
LG LL P
Sbjct: 403 LGISLLRSPD 412
>gi|375009531|ref|YP_004983164.1| Rhomboid [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288380|gb|AEV20064.1| Rhomboid [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 389
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 15/150 (10%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +R + M+LH +HLLTN+LA+ ++G+ +E +G LR +YV +G
Sbjct: 215 GAKFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAG 274
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN---KCVSITMLI 163
F G L S L T +S GASGA+FGL GA ++ T+Y + + + + ++
Sbjct: 275 FFGALASFLF------TPSLSAGASGAIFGLFGA----LLYFGTVYRHLFFRTMGMNVIS 324
Query: 164 LVIGVNMAIGFM-PGIDNMAHIGGFVAGIL 192
L+I VN+ G + PGIDN HIGG V G L
Sbjct: 325 LII-VNLLFGLLVPGIDNAGHIGGLVGGFL 353
>gi|68479117|ref|XP_716364.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
gi|46438031|gb|EAK97368.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
Length = 669
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 22/208 (10%)
Query: 41 TLKKLGGLSRNLVVYDG------EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
+L +L GL++ + DG + YR F ++LHA +H++ N L + +G +E + G
Sbjct: 285 SLSELCGLTKLKLSSDGSAYLPDQWYRIFIPIFLHAGFLHIIFNLLLQVTMGSSIERNIG 344
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII----TNWT 150
++ ++Y+ SG GG LL + + Q + S GASGALFG++ ++ I N
Sbjct: 345 IIKYAIIYISSGIGGFLLGA---NFTPQGIA-STGASGALFGIVATNIILFIYTGKKNTN 400
Query: 151 LYTNKCVSITMLILV--IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+Y K ++ + I++ I +++ +G +PG+DN +HIGGF GIL ++L P + ++ G
Sbjct: 401 MYGTKHYALFICIMIGEIVISLVLGLLPGLDNFSHIGGFAMGILSSIVVLKDPFWVFIDG 460
Query: 209 PYIAPGYE------LNHKKPKYQCHQKL 230
P LN+ P Y K+
Sbjct: 461 IITYPKNPSTWQQFLNNWNPMYSIEDKI 488
>gi|261417690|ref|YP_003251372.1| rhomboid family protein [Geobacillus sp. Y412MC61]
gi|319767503|ref|YP_004133004.1| rhomboid family protein [Geobacillus sp. Y412MC52]
gi|261374147|gb|ACX76890.1| Rhomboid family protein [Geobacillus sp. Y412MC61]
gi|317112369|gb|ADU94861.1| Rhomboid family protein [Geobacillus sp. Y412MC52]
Length = 386
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 59/150 (39%), Positives = 88/150 (58%), Gaps = 15/150 (10%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +R + M+LH +HLLTN+LA+ ++G+ +E +G LR +YV +G
Sbjct: 212 GAKFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAG 271
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN---KCVSITMLI 163
F G L S L T +S GASGA+FGL GA ++ T+Y + + + + ++
Sbjct: 272 FFGALASFLF------TPSLSAGASGAIFGLFGA----LLYFGTVYRHLFFRTMGMNVIS 321
Query: 164 LVIGVNMAIGFM-PGIDNMAHIGGFVAGIL 192
L+I VN+ G + PGIDN HIGG V G L
Sbjct: 322 LII-VNLLFGLLVPGIDNAGHIGGLVGGFL 350
>gi|429327760|gb|AFZ79520.1| hypothetical protein BEWA_023690 [Babesia equi]
Length = 492
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 89/169 (52%), Gaps = 5/169 (2%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
S+ + P+ + +GGLS NL+ GE +R M+LH +H+ N + + I +
Sbjct: 133 SKAAWDSPNFRIFESVGGLSANLIRNYGEWFRLVWSMFLHGGWMHIAFNVCSQVQILWIV 192
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E D+GF R +L+ +SG GG L+S + ++VG+SGAL+GL GA + I W
Sbjct: 193 EPDWGFWRTFILFFISGIGGNLMSAV-----LDPCGVTVGSSGALYGLYGALIPYCIEYW 247
Query: 150 TLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
+ I LI+ I V + G IDN AH+GG + G+L GF +
Sbjct: 248 NTLPHPIFIIIFLIVSIFVGLLTGLSGYIDNYAHLGGCMFGLLWGFTTI 296
>gi|340502629|gb|EGR29302.1| rhomboid family protein, putative [Ichthyophthirius multifiliis]
Length = 255
Score = 87.4 bits (215), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 93/189 (49%), Gaps = 18/189 (9%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
E+ L L K G +L+ + +++RF + +LHAN +H+ N ++ L
Sbjct: 61 EESKLLEQDQQVLIKYGANVPSLIKNENQLWRFVTAAFLHANFLHIFFNMISTFIFVSSL 120
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E +GF + +++LS GG + S D + Q I+VGAS ALFG++G L+ +I NW
Sbjct: 121 EHTYGFFTVFYIWILSAIGGNIFSA---DFATQN-SIAVGASTALFGMIGLYLAYLILNW 176
Query: 150 T----LYTNKCVSITMLILVIGVNMAI-----GFMPG-----IDNMAHIGGFVAGILLGF 195
L +C + M IL++ + + G M G IDN H GGF+ GIL G
Sbjct: 177 NALRFLEDLRCFVLCMAILIVSMVFLLSSGNSGIMGGEKEQNIDNYGHFGGFITGILAGV 236
Query: 196 ILLLRPQYG 204
+YG
Sbjct: 237 AFPKSLEYG 245
>gi|300812773|ref|ZP_07093172.1| peptidase, S54 family [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313124161|ref|YP_004034420.1| membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|422844075|ref|ZP_16890785.1| S54 family peptidase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|300496246|gb|EFK31369.1| peptidase, S54 family [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312280724|gb|ADQ61443.1| Membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|325685831|gb|EGD27902.1| S54 family peptidase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 223
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 14/177 (7%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
ST+ L K+G + VV +G+ +R F+ +LH ++H+ +N++ I +IG E FG
Sbjct: 31 ESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 90
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASL-----SEIITNWTL 151
R L+Y+LSG GG LL+ ++ IS GAS ALFGL GA + T +
Sbjct: 91 RFLLIYLLSGVGGSLLTLAFGNDQ----AISAGASTALFGLFGAMTCTGFKDKDNTLLSF 146
Query: 152 YTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+ +++ ++ LV+ V FMP +D + H+GG + G LL IL GY G
Sbjct: 147 LGRQALALAVINLVLDV-----FMPDVDILGHVGGLITGALLAVILGDATYKGYGKG 198
>gi|50426743|ref|XP_461969.1| DEHA2G09724p [Debaryomyces hansenii CBS767]
gi|49657639|emb|CAG90439.1| DEHA2G09724p [Debaryomyces hansenii CBS767]
Length = 610
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 95/178 (53%), Gaps = 14/178 (7%)
Query: 41 TLKKLGGLS----RNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
+L +L GLS ++ V + YR + M+LHA +H+L N L + +G +E GF+
Sbjct: 267 SLNELCGLSGVPIKDDVYKPHQWYRVITPMFLHAGFLHILFNLLLQVTMGASIERSIGFI 326
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII----TNWTLY 152
+ ++Y++ G G LL S GASGALFG++ ++ + N +Y
Sbjct: 327 KYAIIYLMCGISGFLLGANFSPNGIA----STGASGALFGVVATNIIMFVYCGKKNTNIY 382
Query: 153 TNKCVS--ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
K I ++I+ I +++ +G +PG+DN +HIGGF GIL+ +LL P YV G
Sbjct: 383 GTKKYGLFIFIMIMEIVISLVLGLLPGMDNFSHIGGFAMGILMAILLLPDPFLVYVDG 440
>gi|221057219|ref|XP_002259747.1| rhomboid protease [Plasmodium knowlesi strain H]
gi|193809819|emb|CAQ40523.1| rhomboid protease, putative [Plasmodium knowlesi strain H]
Length = 664
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 93/170 (54%), Gaps = 5/170 (2%)
Query: 29 RSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVK 88
R ++S +T +LGGL+ N + GEIYR F ++LH +H++ N L + I
Sbjct: 334 RGDSSWDSVNTRVYNQLGGLNTNYIRNYGEIYRLFWSVYLHGGFMHIIFNVLCQIQILWM 393
Query: 89 LEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITN 148
+E D+GFLR LL+ +SG G LLS + +++G+SG+L+GL+GA + I
Sbjct: 394 IEPDWGFLRTLLLFFISGVTGNLLSAV-----CDPCGVTIGSSGSLYGLIGALFTYHIEY 448
Query: 149 WTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
W C + +++VI + IG DN AH+GG + GIL GF +
Sbjct: 449 WKTIPRPCSVLIFMVIVIIFGIFIGMFGYTDNYAHMGGCLGGILYGFATI 498
>gi|68479248|ref|XP_716303.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
gi|46437969|gb|EAK97307.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
Length = 669
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 22/208 (10%)
Query: 41 TLKKLGGLSRNLVVYDG------EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
+L +L GL++ + DG + YR F ++LHA +H++ N L + +G +E + G
Sbjct: 285 SLSELCGLTKLKLSSDGSAYLPDQWYRIFIPIFLHAGFLHIIFNLLLQVTMGSSIERNIG 344
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII----TNWT 150
++ ++Y+ SG GG LL + + Q + S GASGALFG++ ++ I N
Sbjct: 345 IIKYAIIYISSGIGGFLLGA---NFTPQGIA-STGASGALFGIVATNIILFIYTGKKNTN 400
Query: 151 LYTNKCVSITMLILV--IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+Y K ++ + I++ I +++ +G +PG+DN +HIGGF GIL ++L P + ++ G
Sbjct: 401 MYGTKHYALFICIMIGEIVISLVLGLLPGLDNFSHIGGFAMGILSSIVVLKDPFWVFIDG 460
Query: 209 PYIAPGYE------LNHKKPKYQCHQKL 230
P LN+ P Y K+
Sbjct: 461 IITYPKNPSTWQQFLNNWNPMYSIEDKI 488
>gi|238878377|gb|EEQ42015.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 669
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/208 (30%), Positives = 110/208 (52%), Gaps = 22/208 (10%)
Query: 41 TLKKLGGLSRNLVVYDG------EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
+L +L GL++ + DG + YR F ++LHA +H++ N L + +G +E + G
Sbjct: 285 SLSELCGLTKLKLSSDGSAYLPDQWYRIFIPIFLHAGFLHIIFNLLLQVTMGSSIERNIG 344
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII----TNWT 150
++ ++Y+ SG GG LL + + Q + S GASGALFG++ ++ I N
Sbjct: 345 IIKYAIIYISSGIGGFLLGA---NFTPQGIA-STGASGALFGIVATNIILFIYTGKKNTN 400
Query: 151 LYTNKCVSITMLILV--IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+Y K ++ + I++ I +++ +G +PG+DN +HIGGF GIL ++L P + ++ G
Sbjct: 401 MYGTKHYALFICIMIGEIVISLVLGLLPGLDNFSHIGGFAMGILSSIVVLKDPFWVFIDG 460
Query: 209 PYIAPGYE------LNHKKPKYQCHQKL 230
P LN+ P Y K+
Sbjct: 461 IITYPKNPSTWQQFLNNWNPMYSIEDKI 488
>gi|302663450|ref|XP_003023367.1| hypothetical protein TRV_02469 [Trichophyton verrucosum HKI 0517]
gi|291187361|gb|EFE42749.1| hypothetical protein TRV_02469 [Trichophyton verrucosum HKI 0517]
Length = 507
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 10/165 (6%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LHA ++H+ N A L IG +E G+ R ++Y SG G +L
Sbjct: 272 QWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSSGIFGFVLG---- 327
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG LFG+ + ++ W V +T +++ + ++ +G +PG
Sbjct: 328 GNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAISFVLGLLPG 387
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIAPGYEL 217
+DN +HIGGF+ G++LG +L LR + G V PY++ G L
Sbjct: 388 LDNFSHIGGFLTGLVLGICILRSPDTLRERIG-VKTPYVSMGGNL 431
>gi|302497075|ref|XP_003010538.1| hypothetical protein ARB_03239 [Arthroderma benhamiae CBS 112371]
gi|291174081|gb|EFE29898.1| hypothetical protein ARB_03239 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 87.4 bits (215), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 10/165 (6%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LHA ++H+ N A L IG +E G+ R ++Y SG G +L
Sbjct: 244 QWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSSGIFGFVLG---- 299
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG LFG+ + ++ W V +T +++ + ++ +G +PG
Sbjct: 300 GNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAISFVLGLLPG 359
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIAPGYEL 217
+DN +HIGGF+ G++LG +L LR + G V PY++ G L
Sbjct: 360 LDNFSHIGGFLTGLVLGICILRSPDTLRERIG-VKTPYVSMGGNL 403
>gi|225682090|gb|EEH20374.1| rhomboid family membrane protein [Paracoccidioides brasiliensis
Pb03]
Length = 735
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 93/190 (48%), Gaps = 19/190 (10%)
Query: 28 PRSENS--LFGPSTATLKKLGGLSRNLVVYD-------------GEIYRFFSCMWLHANV 72
PRS +S + + TL +L G S+ V D + +RF M+LHA +
Sbjct: 488 PRSTSSDPISPENQCTLSELCGFSKRHRVPDPKPNGSIKQKPEPNQWFRFIVPMFLHAGL 547
Query: 73 IHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASG 132
+H+ N +A L IG +E G+ R ++Y SG G +L + S GASG
Sbjct: 548 VHIGFNMMAQLTIGADMERTIGWWRYAIVYFASGIFGFILGA----NFAASGIASTGASG 603
Query: 133 ALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGIL 192
L G+L + ++ W + ++++ I ++ +G +PG+DN +HIGGF+ G++
Sbjct: 604 CLSGILALACLDLFYTWGSRPKPVTELIIMLITIAISFVLGLLPGLDNFSHIGGFLVGLV 663
Query: 193 LGFILLLRPQ 202
LG LL P
Sbjct: 664 LGISLLRSPD 673
>gi|325297592|ref|YP_004257509.1| Peptidase S54, rhomboid domain [Bacteroides salanitronis DSM 18170]
gi|324317145|gb|ADY35036.1| Peptidase S54, rhomboid domain [Bacteroides salanitronis DSM 18170]
Length = 963
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 8/174 (4%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
SL P+ +L K G L + G+ +R +C ++H +IHLL N A+L+IG+ LE+
Sbjct: 560 SLIEPTGISLMKWGADFGPLTL-TGDWWRTVTCNFIHIGIIHLLMNMYALLYIGIFLEQI 618
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
G ++ Y+L+G L S E+ IS GASG++FGL G LS +I N +
Sbjct: 619 IGSRKLMTAYLLTGLFSALASLTAHPET-----ISAGASGSIFGLYGIFLSYLIFNHKIE 673
Query: 153 TNKCVSITMLI-LVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQYG 204
++ S+ I + N+ +G GIDN AHIGG V+G++LG LL +Y
Sbjct: 674 KHQRKSLLFSIGFFVIYNLLLGTKEEGIDNAAHIGGLVSGVILGITYLLADKYS 727
>gi|327300028|ref|XP_003234707.1| rhomboid family membrane protein [Trichophyton rubrum CBS 118892]
gi|326463601|gb|EGD89054.1| rhomboid family membrane protein [Trichophyton rubrum CBS 118892]
Length = 497
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 76/145 (52%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LHA ++H+ N A L IG +E G+ R ++Y SG G +L
Sbjct: 248 QWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSSGIFGFVLG---- 303
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG LFG+ + ++ W V +T +++ + ++ +G +PG
Sbjct: 304 GNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAISFVLGLLPG 363
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF+ G++LG +L P
Sbjct: 364 LDNFSHIGGFLTGLVLGICILRSPD 388
>gi|326473553|gb|EGD97562.1| rhomboid family membrane protein [Trichophyton tonsurans CBS
112818]
gi|326480224|gb|EGE04234.1| rhomboid family membrane protein [Trichophyton equinum CBS 127.97]
Length = 497
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 10/165 (6%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LHA ++H+ N A L IG +E G+ R ++Y SG G +L
Sbjct: 248 QWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSSGIFGFVLG---- 303
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG LFG+ + ++ W V +T +++ + ++ +G +PG
Sbjct: 304 GNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAISFVLGLLPG 363
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIAPGYEL 217
+DN +HIGGF+ G++LG +L LR + G V PY++ G L
Sbjct: 364 LDNFSHIGGFLTGLVLGICILRSPDTLRERIG-VKTPYVSMGGNL 407
>gi|154505636|ref|ZP_02042374.1| hypothetical protein RUMGNA_03175 [Ruminococcus gnavus ATCC 29149]
gi|336431736|ref|ZP_08611578.1| hypothetical protein HMPREF0991_00697 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153794075|gb|EDN76495.1| putative rhomboid protease GluP [Ruminococcus gnavus ATCC 29149]
gi|336019755|gb|EGN49477.1| hypothetical protein HMPREF0991_00697 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 200
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 94/174 (54%), Gaps = 10/174 (5%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SF EN++F + K G + L+ D + YR +C++LH + HL+ N + +
Sbjct: 25 SFLGNPENAVF------MIKYGAMYPPLIFEDAQYYRLITCIFLHFGIDHLMNNMVMLGA 78
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G LE++ G + L+Y +SG G L+S L D L +S GASGA+FGLLGA L
Sbjct: 79 LGWNLEKEIGSFKFLLIYFVSGIGANLIS-LAMDFYTGNLAVSAGASGAIFGLLGALLWV 137
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFIL 197
+I N + ML +V+ +++ GF G+DN AH+GG + G L +L
Sbjct: 138 VIRNRG-KAGRLTGRGMLFMVL-LSLYFGFTSTGVDNAAHVGGLICGFLTAVLL 189
>gi|302911024|ref|XP_003050402.1| hypothetical protein NECHADRAFT_63508 [Nectria haematococca mpVI
77-13-4]
gi|256731339|gb|EEU44689.1| hypothetical protein NECHADRAFT_63508 [Nectria haematococca mpVI
77-13-4]
Length = 569
Score = 87.0 bits (214), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF + ++LHA V+H+L N L L IG +E G +R L+Y+ +G G ++ +
Sbjct: 334 FRFITSIFLHAGVVHILFNLLVQLTIGKDMERAIGPVRFLLVYISAGIFGNIMGGNYAPP 393
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S+GASGA+FG++ +L +++ +W + + + L + + +G +PG+D
Sbjct: 394 GY----ASMGASGAIFGIIALTLLDLLYSWKDRKSPVKDLLFIFLDMAIAFVLGLLPGLD 449
Query: 180 NMAHIGGFVAGILLGFILLLRPQ 202
N AHIGGF+ G+ LG +L P
Sbjct: 450 NFAHIGGFLMGLSLGVCVLHSPN 472
>gi|348509157|ref|XP_003442118.1| PREDICTED: inactive rhomboid protein 1-like [Oreochromis niloticus]
Length = 858
Score = 87.0 bits (214), Expect = 7e-15, Method: Composition-based stats.
Identities = 56/183 (30%), Positives = 92/183 (50%), Gaps = 19/183 (10%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + I LE+ G+LRI ++Y+LSG G L S +
Sbjct: 655 QFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 714
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ W + + T L+ V+ A G +P
Sbjct: 715 -----PYRAEVGPAGSQFGILACLFVELFQCWQILAQPWRAFTKLLCVVLFLFAFGLLPW 769
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G L F L PY++ G ++K +C Q +++++ V
Sbjct: 770 IDNFAHISGFISGFFLSFAFL----------PYVSFGRMDMYRK---RC-QIIIFLLVFV 815
Query: 238 VLF 240
LF
Sbjct: 816 GLF 818
>gi|386714819|ref|YP_006181142.1| S54 family peptidase [Halobacillus halophilus DSM 2266]
gi|384074375|emb|CCG45868.1| S54 family peptidase [Halobacillus halophilus DSM 2266]
Length = 510
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 90/159 (56%), Gaps = 16/159 (10%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S +TL + G N + +GE +R S M+LH ++HLL N LA+ +IG+ +E +G R
Sbjct: 207 SVSTLIEFGA-KYNPAIMEGEWWRIGSSMFLHIGLLHLLMNMLALYYIGIAVERIYGTWR 265
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
++Y+L+G GG+ S + ++ GASGA+FGL GA L + + L+
Sbjct: 266 FSVIYLLAGIFGGVASFM------LNPHVAAGASGAIFGLFGALLYFGVRHRQLFFK--- 316
Query: 158 SITM---LILVIGVNMAIGFM-PGIDNMAHIGGFVAGIL 192
TM LI VI +N+A G M P +DN AH+GG + G +
Sbjct: 317 --TMGWNLIFVIALNIAFGIMVPQVDNGAHMGGLIGGFI 353
>gi|104774327|ref|YP_619307.1| hypothetical protein Ldb1479 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423408|emb|CAI98279.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
Length = 215
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 14/177 (7%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
ST+ L K+G + VV +G+ +R F+ +LH ++H+ +N++ I +IG E FG
Sbjct: 23 ESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 82
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASL-----SEIITNWTL 151
R L+Y+LSG GG LL+ ++ IS GAS ALFGL GA + T +
Sbjct: 83 RFLLIYLLSGVGGSLLTLAFGNDQ----AISAGASTALFGLFGAMTCAGFKDKDNTLLSF 138
Query: 152 YTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+ +++ ++ LV+ V FMP +D + H+GG + G LL IL GY G
Sbjct: 139 LGRQALALAVINLVLDV-----FMPDVDILGHVGGLITGALLAVILGDATYKGYGKG 190
>gi|448114817|ref|XP_004202673.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
gi|359383541|emb|CCE79457.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
Length = 524
Score = 86.7 bits (213), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/199 (33%), Positives = 95/199 (47%), Gaps = 21/199 (10%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
YR + ++LHA IH++ N L +G +E G ++ L+Y+ SG G LL +
Sbjct: 279 YRIITPIFLHAGFIHIIFNLLLQTTMGATIERHIGLIKYFLIYIPSGIAGFLLGANFSPD 338
Query: 120 SQQTLQISVGASGALFGLLGASLSEII----TNWTLYTNKCVSI--TMLILVIGVNMAIG 173
S GASGALFG+L L I N +Y K + T L+ I V+ +G
Sbjct: 339 GIS----STGASGALFGILATDLILFIYCGRKNTNIYGTKKFGLFLTFLVAEIIVSFVLG 394
Query: 174 FMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYE------LNHKKPKYQCH 227
+PG+DN +HIGGF GIL +L+ P + YV G I ++ LN+ P Y
Sbjct: 395 LLPGMDNFSHIGGFAMGILTSVVLIPDPFFVYVDGIIIYNAHDNTLQQFLNNWNPFYNYE 454
Query: 228 QKL-----LWVISVVVLFV 241
K+ LW + V V
Sbjct: 455 DKIPYRFYLWCLVRTVCLV 473
>gi|336266774|ref|XP_003348154.1| hypothetical protein SMAC_03999 [Sordaria macrospora k-hell]
gi|380091090|emb|CCC11296.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 555
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 56/164 (34%), Positives = 88/164 (53%), Gaps = 12/164 (7%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
STAT++ V + +RF + M+LHA VIH+ N L + IG ++E G +R
Sbjct: 269 STATMEN--------VPEPNQWWRFITPMFLHAGVIHIGFNMLLQMTIGREMERSIGSIR 320
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
++YV +G G ++ QT GASGALFG++ L +++ +W +
Sbjct: 321 FFIVYVSAGIFGFVMGGNFAANGMQT----TGASGALFGVIALLLLDLLYSWRDRKSPWK 376
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
+ + L I + +G +PG+DN AHIGGF+AG+ LG +L P
Sbjct: 377 DLLFIALDIVIAFVLGLLPGLDNFAHIGGFLAGLALGICVLQSP 420
>gi|331092038|ref|ZP_08340869.1| hypothetical protein HMPREF9477_01512 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402239|gb|EGG81810.1| hypothetical protein HMPREF9477_01512 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 203
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/158 (38%), Positives = 89/158 (56%), Gaps = 4/158 (2%)
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
G + LV+ + E YR + ++LH HL+ N + + F+G LEE+ G + LLY +S
Sbjct: 40 GAMFVPLVLGNHEYYRLITSIFLHFGFAHLMNNMVMLFFLGSILEEEIGSFKYLLLYFVS 99
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G G +LS D IS GASGA+FG++GA L I+T + M+ +V
Sbjct: 100 GVAGNILSAF-MDLKTGEFVISAGASGAIFGVIGALLI-IVTKNHGHLRTLDGRGMVFMV 157
Query: 166 IGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRPQ 202
+ ++ GF G+DNMAHIGG ++GILL FIL + Q
Sbjct: 158 V-CSLYHGFTSTGVDNMAHIGGLLSGILLAFILYRKRQ 194
>gi|354548360|emb|CCE45096.1| hypothetical protein CPAR2_701000 [Candida parapsilosis]
Length = 664
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/183 (34%), Positives = 100/183 (54%), Gaps = 18/183 (9%)
Query: 39 TATLKKLGGLSRNLVVYD-------GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEE 91
T +L +L GLS L YD + YR F ++LHA +H++ N L L +G +E
Sbjct: 291 TCSLSELCGLS-GLPTYDDGTKYAPNQWYRIFIPIFLHAGFLHIIFNLLLQLTMGASIER 349
Query: 92 DFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII----T 147
+ G L+ ++Y++SG G LL + + Q + S GASGALFG++ ++ I
Sbjct: 350 NIGILKYAIIYIVSGISGFLLGA---NFTPQGI-ASTGASGALFGIVATNIILFIYAGRK 405
Query: 148 NWTLY--TNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGY 205
N +Y T+ + I +I I +++ +G +PG+DN +H+GGF GIL +LL P + Y
Sbjct: 406 NTNMYGTTHYKLFIFFMICEIIISLVLGLLPGLDNFSHLGGFAMGILTAVLLLKDPFWVY 465
Query: 206 VSG 208
G
Sbjct: 466 KDG 468
>gi|260824301|ref|XP_002607106.1| hypothetical protein BRAFLDRAFT_68100 [Branchiostoma floridae]
gi|229292452|gb|EEN63116.1| hypothetical protein BRAFLDRAFT_68100 [Branchiostoma floridae]
Length = 1084
Score = 86.7 bits (213), Expect = 8e-15, Method: Composition-based stats.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR ++ ++LHA ++HLL + + + I LE+ G+ RI ++Y+LSG GG L S +
Sbjct: 876 QFYRLWTSLFLHAGLVHLLLSVIFQMTILRDLEKLAGWGRIAIIYILSGIGGNLASAVFL 935
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
Q VG +GA FG++ E+ +W + +I L +++ V +G +P
Sbjct: 936 -----PYQAEVGPAGAHFGVIACLFVEVFQSWQMLQAPWRAILKLSIIVLVLFLLGLLPW 990
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AHI GF+ GILL F L PYI G ++ N K+
Sbjct: 991 IDNFAHITGFICGILLSFSFL----------PYITFGAFDKNRKR 1025
>gi|378726481|gb|EHY52940.1| hypothetical protein HMPREF1120_01142 [Exophiala dermatitidis
NIH/UT8656]
Length = 524
Score = 86.7 bits (213), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 10/188 (5%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
LK L G S + + +RF M+LHA ++H+ N + L + ++E+ G +R L+
Sbjct: 220 LKALCGFSGFSNEHPNQWFRFIVPMFLHAGLVHIAFNLMLQLTMAREMEKAIGSIRFALV 279
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y SG G +L + S GASG LFG+L +L ++I W + +
Sbjct: 280 YFSSGIFGFVLG----GNFAASAIASTGASGCLFGVLALTLLDLIYGWNERRSPVRELMW 335
Query: 162 LILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL-----LRPQYGYVS-GPYIAPGY 215
+++ + ++ +G +PG+DN +HIGGF+ G+ +G +L LR + G VS PY G
Sbjct: 336 ILVDVLISFVLGLLPGLDNFSHIGGFLMGLAMGICILHSPNILRKRNGEVSAAPYRNVGS 395
Query: 216 ELNHKKPK 223
E + PK
Sbjct: 396 EPDISNPK 403
>gi|365157863|ref|ZP_09354108.1| hypothetical protein HMPREF1015_00268 [Bacillus smithii 7_3_47FAA]
gi|363622533|gb|EHL73692.1| hypothetical protein HMPREF1015_00268 [Bacillus smithii 7_3_47FAA]
Length = 397
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 59/156 (37%), Positives = 95/156 (60%), Gaps = 10/156 (6%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+T TL + G N ++ DGE +RFF+ ++LH V+HLL N++A+ ++G +E+ FG R
Sbjct: 208 NTDTLIRFGA-KFNPLILDGEWWRFFTPIFLHIGVLHLLMNTMALYYLGTMVEKIFGRWR 266
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+Y+ SGF G + S + T +S GASGA+FG GA L N +L+ + +
Sbjct: 267 FLWIYLFSGFLGSVASFVF------TPNLSAGASGAIFGCFGALLFFGFVNRSLFF-RTI 319
Query: 158 SITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGIL 192
+ +++++I +N+ GF +PGIDN HIGG + G L
Sbjct: 320 GMNVIVVII-INLIFGFTVPGIDNSGHIGGLIGGFL 354
>gi|326430116|gb|EGD75686.1| hypothetical protein PTSG_07804 [Salpingoeca sp. ATCC 50818]
Length = 855
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/163 (34%), Positives = 86/163 (52%), Gaps = 5/163 (3%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L+ GLS + YRFF ++LHA IHL L + +E G+ R+ +
Sbjct: 629 LEDKCGLSPFARNAPDQWYRFFLAIFLHAGGIHLFVVLLLQFSLLPDVERIAGWWRVAFI 688
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y++SG GG ++S L Q++VGASGA FG+L A + E++ +W +
Sbjct: 689 YMISGAGGFVISGLFS-----RYQVTVGASGANFGILAALVVELVQSWKFIERPGSELAK 743
Query: 162 LILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
LI++I + AIG +P +DN +HIGGF+ G+L L +G
Sbjct: 744 LIVIIVLAFAIGILPYVDNYSHIGGFLFGMLAALAFLPHITFG 786
>gi|448238728|ref|YP_007402786.1| rhomboid family protein [Geobacillus sp. GHH01]
gi|445207570|gb|AGE23035.1| rhomboid family protein [Geobacillus sp. GHH01]
Length = 389
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/150 (38%), Positives = 87/150 (58%), Gaps = 15/150 (10%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +R + M+LH +HLLTN+LA+ ++G+ +E +G R +YV +G
Sbjct: 215 GAKFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSFRFLFIYVTAG 274
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN---KCVSITMLI 163
F G L S L T +S GASGA+FGL GA ++ T+Y + + + + ++
Sbjct: 275 FFGALASFLF------TPSLSAGASGAIFGLFGA----LLYFGTVYRHLFFRTMGMNVIS 324
Query: 164 LVIGVNMAIGFM-PGIDNMAHIGGFVAGIL 192
L+I VN+ G + PGIDN HIGG V G L
Sbjct: 325 LII-VNLLFGLLVPGIDNAGHIGGLVGGFL 353
>gi|198415237|ref|XP_002121328.1| PREDICTED: similar to C16ORF8, partial [Ciona intestinalis]
Length = 397
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 101/212 (47%), Gaps = 23/212 (10%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
SE +L G + + +IYR + + LHA ++H L + + + + +
Sbjct: 164 SEATLCSQVNCMQDTCGLIPFRVADKPDQIYRLWLPVMLHAGILHCLVSVVFQMTVLRDM 223
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E+ G+LRIG++Y+ SG G S + + VG +G+ FG+L E++ +W
Sbjct: 224 EKLAGWLRIGIIYIFSGITGNFASAIFL-----PYRAEVGPAGSHFGILACLFVEVLQSW 278
Query: 150 TLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGP 209
L + ++ L+ + V G +P IDN AHI GF++G+LL F+LL P
Sbjct: 279 QLLKSPLRALFKLVAITTVLFVFGALPWIDNFAHIFGFISGLLLSFVLL----------P 328
Query: 210 YIAPGYELNHKKPKYQCHQKLLWVISVVVLFV 241
YI ++ H+K + V++ LF+
Sbjct: 329 YITFN--------RFDRHRKRIQVVTCSALFI 352
>gi|342874669|gb|EGU76647.1| hypothetical protein FOXB_12836 [Fusarium oxysporum Fo5176]
Length = 572
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
YRF + +++HA +IH++ N L L I ++E G +R L+Y+ +G G ++ +
Sbjct: 331 YRFITSIFMHAGLIHIIFNLLLQLTIAKEMEMAIGPVRFLLVYMSAGIFGNIMGGNYAPP 390
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
Q SVGASGALFG++ L +++ +W N + +IL + + +G +PG+D
Sbjct: 391 GQP----SVGASGALFGIIALVLLDLLYSWKDRRNPVKDLLFIILDMVIAFVLGLLPGLD 446
Query: 180 NMAHIGGFVAGILLGFILLLRPQ 202
N HIGGF+ G+ LG +L P
Sbjct: 447 NFVHIGGFLMGLSLGVCVLHSPN 469
>gi|241950141|ref|XP_002417793.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641131|emb|CAX45507.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 666
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 109/204 (53%), Gaps = 25/204 (12%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
YR F ++LHA +H++ N L + +G +E + G ++ ++Y+ SG GG LL +
Sbjct: 316 YRIFIPIFLHAGFLHIIFNLLLQVTMGASIERNIGIIKYAIIYISSGIGGFLLGA---NF 372
Query: 120 SQQTLQISVGASGALFGLLGASLSEII----TNWTLYTNKCVSITMLILV--IGVNMAIG 173
+ Q + S GASGALFG++ ++ I N +Y K ++ + I++ I +++ +G
Sbjct: 373 TPQGIA-STGASGALFGIVATNIILFIYTGKKNTNMYGTKHYALFICIMIGEIVISLVLG 431
Query: 174 FMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYE------LNHKKPKYQCH 227
+PG+DN +HIGGF GIL ++L P + ++ G P LN+ P Y
Sbjct: 432 LLPGLDNFSHIGGFAMGILSSIVVLKDPFWVFIDGIITYPKNPSTWQQFLNNWNPMYSIE 491
Query: 228 QKL-----LW----VISVVVLFVW 242
K+ +W VI++V++ ++
Sbjct: 492 DKIPSRFYVWCGVRVIALVLMIIY 515
>gi|15613984|ref|NP_242287.1| hypothetical protein BH1421 [Bacillus halodurans C-125]
gi|10174038|dbj|BAB05140.1| BH1421 [Bacillus halodurans C-125]
Length = 514
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 12/160 (7%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N + DGE +R S M+LH ++H + NSLA+ ++G +E +G R ++Y ++G
Sbjct: 219 GAKYNPAIADGEWWRLLSSMFLHIGILHFMMNSLALFYLGGTVERIYGTSRFFIIYFIAG 278
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
G + S +S GASGA+FG GA L + L+ S +LILV
Sbjct: 279 LAGSIASF------ALNAHVSAGASGAIFGCFGALLYFGTVHKKLFFRTMGSSVLLILVF 332
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLL---RPQ 202
N+A GF +P IDN AHIGG + G L ++ L RP+
Sbjct: 333 --NLAFGFIIPMIDNGAHIGGLIGGFLASAVVHLPNHRPR 370
>gi|385816085|ref|YP_005852476.1| hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|325126122|gb|ADY85452.1| Putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 223
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 14/177 (7%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
ST+ L K+G + VV +G+ +R F+ +LH ++H+ +N++ I +IG E FG
Sbjct: 31 ESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 90
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASL-----SEIITNWTL 151
R L+Y+LSG GG LL+ ++ IS GAS ALFGL GA + T +
Sbjct: 91 RFLLIYLLSGVGGSLLTLAFGNDQ----AISAGASTALFGLFGAMTCAGFKDKDNTLLSF 146
Query: 152 YTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+ ++ ++ LV+ V FMP +D + H+GG + G LL IL GY G
Sbjct: 147 LGRQAWALAVINLVLDV-----FMPDVDILGHVGGLITGALLAVILGDATYKGYGKG 198
>gi|448535206|ref|XP_003870930.1| Rbd1 rhomboid-like protein [Candida orthopsilosis Co 90-125]
gi|380355286|emb|CCG24803.1| Rbd1 rhomboid-like protein [Candida orthopsilosis]
Length = 658
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 96/182 (52%), Gaps = 16/182 (8%)
Query: 39 TATLKKLGGLSRNLVVYDGEIY------RFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
T +L L GLS DGE Y R F ++LHA +H++ N L L +G +E +
Sbjct: 290 TCSLSDLCGLSGLPTYDDGEKYAPNQWYRIFIPIFLHAGFLHIIFNLLLQLTMGASIERN 349
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII------ 146
G L+ ++Y+ SG G LL + + Q + S GASGALFG++ ++ I
Sbjct: 350 IGILKYAIIYIASGISGFLLGA---NFTPQGI-ASTGASGALFGIVATNIILFIYTGRKN 405
Query: 147 TNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYV 206
TN T+ + I +I I +++ +G +PG+DN +H+GGF GIL +LL P + Y
Sbjct: 406 TNMYGTTHYKLFIFFMICEIVISLVLGLLPGLDNFSHLGGFAMGILTAVLLLKDPFWVYK 465
Query: 207 SG 208
G
Sbjct: 466 DG 467
>gi|440634935|gb|ELR04854.1| hypothetical protein GMDG_07079 [Geomyces destructans 20631-21]
Length = 515
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 81/144 (56%), Gaps = 4/144 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF + M+LHA +IH+ N L + IG ++E+ G +R L+Y+ SG G +L
Sbjct: 258 QWFRFITPMFLHAGLIHIGFNLLLQVTIGREMEQSIGHIRFALMYLSSGIFGFVLGGNFA 317
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG+LFG++ L E++ W+ N + + L I ++ +G +PG
Sbjct: 318 ASGIS----STGASGSLFGIIALMLLELLYTWSERPNPWRDLAFVCLDIVISFVLGLLPG 373
Query: 178 IDNMAHIGGFVAGILLGFILLLRP 201
+DN +HIGGF+ G+ +G +L P
Sbjct: 374 LDNFSHIGGFLMGLAIGICILHSP 397
>gi|220929279|ref|YP_002506188.1| rhomboid family protein [Clostridium cellulolyticum H10]
gi|219999607|gb|ACL76208.1| Rhomboid family protein [Clostridium cellulolyticum H10]
Length = 519
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 87/154 (56%), Gaps = 14/154 (9%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L+ G NL++ +G+ +RF S M+LH +++HL N ++ IG ++E+ FG R +
Sbjct: 214 LEPFGAKVNNLIM-EGQYWRFISPMFLHGDIVHLAVNCYSLYIIGSQVEKIFGRGRFLAI 272
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK--CVSI 159
Y +SGF G S +L SVGASGA+FGL+GA L + L + I
Sbjct: 273 YFVSGFIGSAASFAF------SLNSSVGASGAIFGLVGAMLYFSLRRPALLKSSYGVNLI 326
Query: 160 TMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGIL 192
TMLI +N+A GFM IDN AHIGGFV G L
Sbjct: 327 TMLI----INLAYGFMNKRIDNHAHIGGFVGGFL 356
>gi|367037003|ref|XP_003648882.1| hypothetical protein THITE_2106847 [Thielavia terrestris NRRL 8126]
gi|346996143|gb|AEO62546.1| hypothetical protein THITE_2106847 [Thielavia terrestris NRRL 8126]
Length = 516
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 82/143 (57%), Gaps = 4/143 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF + +++HA VIH+ N L L +G +E+ G +R L+Y+ +G G +L
Sbjct: 276 FRFITPIFMHAGVIHIGFNMLLQLTLGRDMEKSIGSIRFFLVYMSAGIFGFVLG----GN 331
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
T S GASGALFG++ +L +++ +W N + ++L + ++ +G +PG+D
Sbjct: 332 FAATGIASTGASGALFGIIALTLLDLLYSWRDRVNPVRDLAFIVLDVVISFVLGLLPGLD 391
Query: 180 NMAHIGGFVAGILLGFILLLRPQ 202
N +HIGGF+ G+ LG +L P
Sbjct: 392 NFSHIGGFLMGLALGICVLHSPN 414
>gi|328857613|gb|EGG06729.1| hypothetical protein MELLADRAFT_43423 [Melampsora larici-populina
98AG31]
Length = 517
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 77/145 (53%), Gaps = 12/145 (8%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG-FG---GGLLS 113
+ +RF M+LHA VIH N L + +E G +R LLY+ SG FG GG S
Sbjct: 270 QTFRFILPMFLHAGVIHYAINILVQMTSSALIERQMGSIRFLLLYIPSGIFGFILGGNFS 329
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
+ Q SVGASGA+F A L +++ +W++ + L+ I +A+G
Sbjct: 330 LVGQP--------SVGASGAIFSTHAAVLVDLVAHWSIEDRPARKLFFLLFEIIAGLALG 381
Query: 174 FMPGIDNMAHIGGFVAGILLGFILL 198
+PGIDN +H+GGF G+LL IL
Sbjct: 382 LIPGIDNFSHLGGFAMGLLLSLILF 406
>gi|212638734|ref|YP_002315254.1| serine protease of Rhomboid family, contains TPR repeats
[Anoxybacillus flavithermus WK1]
gi|212560214|gb|ACJ33269.1| Serine protease of Rhomboid family, contains TPR repeats
[Anoxybacillus flavithermus WK1]
Length = 517
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 90/171 (52%), Gaps = 24/171 (14%)
Query: 36 GPSTATLKKLG-GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
G ST TL + G N ++ GE +RFF+ + LH +HL N+ A+ ++G +E+ +G
Sbjct: 209 GGSTNTLTLIQYGAKFNPLILQGEWWRFFTPIVLHIGFVHLFMNTFALYYLGPLVEKLYG 268
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
LR +Y+ +GF G L S L + +S GASGA+FG GA LY
Sbjct: 269 SLRFLFIYLFAGFAGSLASFLF------SPSVSAGASGAIFGCFGA---------LLYFG 313
Query: 155 KCV------SITM-LILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFIL 197
K +I M +I VIG+N+A G +P IDN HIGG + G L I+
Sbjct: 314 KAKPHIFFRTIGMNVITVIGINLAFGLVVPNIDNAGHIGGLIGGFLAASIV 364
>gi|396485661|ref|XP_003842225.1| similar to rhomboid family membrane protein [Leptosphaeria maculans
JN3]
gi|312218801|emb|CBX98746.1| similar to rhomboid family membrane protein [Leptosphaeria maculans
JN3]
Length = 549
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 92/166 (55%), Gaps = 9/166 (5%)
Query: 50 RNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGG 109
R+ + +RF ++LHA +IH+ N L L +G +E++ G LR L+Y +G G
Sbjct: 263 RDRSREPNQWWRFIVPIFLHAGLIHIGFNMLLQLTLGRDMEKEIGPLRFTLVYFAAGIFG 322
Query: 110 GLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVN 169
+L + + SVGASG+LFG+L +L +++ NW+ + + L+L + +
Sbjct: 323 FVLGGNYAADGL----ASVGASGSLFGILALTLLDLLYNWSTRRSPVKDLLFLLLDVAIA 378
Query: 170 MAIGFMPGIDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPY 210
+G +PG+DN +HIGGF+ G++LG LL LR + G PY
Sbjct: 379 FVLGLLPGLDNFSHIGGFLMGLVLGICLLHSPESLRARTGTDEPPY 424
>gi|395238215|ref|ZP_10416153.1| Possible membrane protein [Lactobacillus gigeriorum CRBIP 24.85]
gi|394477919|emb|CCI86130.1| Possible membrane protein [Lactobacillus gigeriorum CRBIP 24.85]
Length = 230
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/187 (34%), Positives = 101/187 (54%), Gaps = 17/187 (9%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
+TATL +LG ++ V G+ +R F+ +LH ++HL++N++ I ++G+ LE G +
Sbjct: 33 ENTATLIRLGAMNNYTVAAAGQWWRLFTAQFLHIGIMHLVSNAVMIYYLGMFLEPLLGHI 92
Query: 97 RIGLLYVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY--T 153
R +Y++SG GG LLS L D S IS GAS ALFGL GA ++ + N T +
Sbjct: 93 RFLAVYLISGIGGNLLSFALGDDRS-----ISAGASTALFGLFGALIAVGVRNATSVEGS 147
Query: 154 NKCVS------ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVS 207
N +S + ++ IG+++ F+P ID H+GG G +L IL R + +
Sbjct: 148 NSLISYISRQAFVLALINIGLDL---FIPNIDLQGHLGGLFTGAMLTIILGNRATNKFSA 204
Query: 208 GPYIAPG 214
I G
Sbjct: 205 KVRIISG 211
>gi|418029655|ref|ZP_12668189.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
gi|354689534|gb|EHE89520.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
Length = 209
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/177 (34%), Positives = 94/177 (53%), Gaps = 14/177 (7%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
ST+ L K+G + VV +G+ +R F+ +LH ++H+ +N++ I +IG E FG
Sbjct: 17 ESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 76
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASL-----SEIITNWTL 151
R L+Y+LSG GG LL+ ++ IS GAS ALFGL GA + T +
Sbjct: 77 RFLLIYLLSGVGGSLLTLAFGNDQ----AISAGASTALFGLFGAMTCAGFKDKDNTLLSF 132
Query: 152 YTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+ +++ ++ LV+ V FMP +D + H+GG + G LL IL GY G
Sbjct: 133 LGRQALALAVINLVLDV-----FMPDVDILGHLGGLITGALLAVILGDATYKGYGKG 184
>gi|123485562|ref|XP_001324518.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121907402|gb|EAY12295.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 443
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 90/169 (53%), Gaps = 7/169 (4%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
+ N L GPS+ + LG + DGEI+RF + ++LH ++ L+ S +LF+ + +
Sbjct: 205 NSNPLIGPSSDNVVILGA-KYGPSILDGEIWRFITAIFLHLGLVQLVF-SEGLLFVTLPV 262
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E D G+ R ++ ++G G +LS L I G SGA+ GL+ + ++IT+W
Sbjct: 263 EIDGGYWRCFFIFFIAGTYGWILSSLFSPN-----MIGAGTSGAVLGLMMVMMCDLITSW 317
Query: 150 TLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
K + +I+ I + G +P +DN +HIGG + GIL ++L
Sbjct: 318 KTAEKKGFKLGKMIVCIAACIIFGLLPFMDNFSHIGGIIVGILCSIMIL 366
>gi|153811275|ref|ZP_01963943.1| hypothetical protein RUMOBE_01667 [Ruminococcus obeum ATCC 29174]
gi|149832773|gb|EDM87857.1| peptidase, S54 family [Ruminococcus obeum ATCC 29174]
Length = 163
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 87/146 (59%), Gaps = 4/146 (2%)
Query: 52 LVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGL 111
+++ GE YR F+CM+LH + HLL N L + +G +LE+ G ++ L+Y++ G G +
Sbjct: 13 MIIQGGEYYRLFTCMFLHFGIEHLLNNMLVLFVLGSRLEQVIGKIKFLLIYLIGGVFGNV 72
Query: 112 LSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMA 171
+S L + +Q +S GASGA+F ++GA + +I N + +S+ ++++ ++
Sbjct: 73 ISLLIELRTQD-FAVSAGASGAVFAVMGAMIYIVIRNKGWLGD--LSMRQILVMAAFSLY 129
Query: 172 IGFMP-GIDNMAHIGGFVAGILLGFI 196
GF G+DN AH+GG V+G L I
Sbjct: 130 FGFASTGVDNTAHVGGMVSGFFLAVI 155
>gi|429852564|gb|ELA27696.1| rhomboid family membrane protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 606
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 83/143 (58%), Gaps = 4/143 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF + ++LHA +IH+ N L + IG ++E G +R L+YV +G G ++ +
Sbjct: 367 FRFITPIFLHAGLIHIGFNLLLQMTIGKEMEIAIGSIRFFLVYVSAGIFGNVMGANYAG- 425
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+ S GASGALFG++ +L +++ +W + + ++L I ++ +G +PG+D
Sbjct: 426 ---VMTASTGASGALFGVIALTLLDLLYSWKDRRSPVKDLMFIMLDIVISFVLGLLPGLD 482
Query: 180 NMAHIGGFVAGILLGFILLLRPQ 202
N AHIGGF+ G+ LG +L P
Sbjct: 483 NFAHIGGFLMGLALGICVLHSPN 505
>gi|383113335|ref|ZP_09934107.1| hypothetical protein BSGG_3039 [Bacteroides sp. D2]
gi|382948721|gb|EFS32339.2| hypothetical protein BSGG_3039 [Bacteroides sp. D2]
Length = 592
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST +L K G L + G+ +R +C ++H HLL N A +++G+ LEE
Sbjct: 185 IMSPSTLSLLKWGADFGPLTL-TGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G S E+ IS GASG++FGL G L+ ++ +
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGET-----ISTGASGSIFGLYGIFLAFLLFHRIAKE 298
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLL 199
+ +T +++ +G N+ G GIDN AHIGG ++G +LG I ++
Sbjct: 299 QRKALLTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVV 344
>gi|380488088|emb|CCF37613.1| rhomboid family protein [Colletotrichum higginsianum]
Length = 572
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 83/143 (58%), Gaps = 4/143 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF + ++LHA +IH+ N L + IG ++E G +R L+YV +G G ++ +
Sbjct: 335 FRFITPIFLHAGLIHIGFNLLLQMTIGKEMEIAIGSIRFFLVYVSAGIFGNVMGANYAG- 393
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+ S GASGALFG++ +L +++ +W + + ++L I ++ +G +PG+D
Sbjct: 394 ---VMAASTGASGALFGVIALTLLDLLYSWKDRRSPVKDLMFILLDIVISFVLGLLPGLD 450
Query: 180 NMAHIGGFVAGILLGFILLLRPQ 202
N AHIGGF+ G+ LG +L P
Sbjct: 451 NFAHIGGFLMGLALGVCVLHSPN 473
>gi|293373190|ref|ZP_06619552.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CMC
3f]
gi|292631838|gb|EFF50454.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CMC
3f]
Length = 584
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST +L K G L + G+ +R +C ++H HLL N A +++G+ LEE
Sbjct: 177 IMSPSTLSLLKWGADFGPLTL-TGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 235
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G S E+ IS GASG++FGL G L+ ++ +
Sbjct: 236 GGRRMFVSYLLTGLCSAAFSLYMHGET-----ISTGASGSIFGLYGIFLAFLLFHRIAKE 290
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLL 199
+ +T +++ +G N+ G GIDN AHIGG ++G +LG I ++
Sbjct: 291 QRKALLTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVV 336
>gi|295661783|ref|XP_002791446.1| DHHC zinc finger membrane protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280003|gb|EEH35569.1| DHHC zinc finger membrane protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 521
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 81/157 (51%), Gaps = 8/157 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LHA ++H+ N +A L IG +E G+ R ++Y SG G +L
Sbjct: 273 QWFRFIVPMFLHAGLVHIGFNMMAQLTIGADMERTIGWWRYAIVYFASGIFGFILGA--- 329
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ S GASG L G+L + ++ W + ++++ I ++ +G +PG
Sbjct: 330 -NFASSGIASTGASGCLSGILALACLDLFYTWGSRPKPVTELIIMLITIAISFVLGLLPG 388
Query: 178 IDNMAHIGGFVAGILLGFILLLRP----QYGYVSGPY 210
+DN +HIGGF+ G++LG LL P + G PY
Sbjct: 389 LDNFSHIGGFLVGLVLGISLLRSPDRLRRIGAAGDPY 425
>gi|242817342|ref|XP_002486936.1| rhomboid family membrane protein [Talaromyces stipitatus ATCC
10500]
gi|218713401|gb|EED12825.1| rhomboid family membrane protein [Talaromyces stipitatus ATCC
10500]
Length = 526
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 82/146 (56%), Gaps = 4/146 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LHA ++H+ N L + +G +E G+ R L+Y SG G ++ +
Sbjct: 260 QWFRFIVPMFLHAGLVHIGFNMLMQMTVGADMERRIGWWRYALVYFSSGIFGFVMGGNYA 319
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ S GASGALFGL+ +L +++ W + V + LI+ I V+ +G +PG
Sbjct: 320 AQGIS----STGASGALFGLVALTLLDLLYTWGERRSPWVELIFLIIEIAVSFVLGLLPG 375
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQY 203
+DN +HIGGF+ G+ +G ++ P Y
Sbjct: 376 LDNFSHIGGFIMGLAMGLCMMRSPNY 401
>gi|299149420|ref|ZP_07042477.1| putative peptidase, S54 (rhomboid) family [Bacteroides sp. 3_1_23]
gi|298512607|gb|EFI36499.1| putative peptidase, S54 (rhomboid) family [Bacteroides sp. 3_1_23]
Length = 592
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST +L K G L + G+ +R +C ++H HLL N A +++G+ LEE
Sbjct: 185 IMSPSTLSLLKWGADFGPLTL-TGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G S E+ IS GASG++FGL G L+ ++ +
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGET-----ISAGASGSIFGLYGIFLAFLLFHRIAKE 298
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLL 199
+ +T +++ +G N+ G GIDN AHIGG ++G +LG I ++
Sbjct: 299 QRKALLTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVV 344
>gi|423298194|ref|ZP_17276253.1| hypothetical protein HMPREF1070_04918 [Bacteroides ovatus
CL03T12C18]
gi|392663610|gb|EIY57158.1| hypothetical protein HMPREF1070_04918 [Bacteroides ovatus
CL03T12C18]
Length = 592
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST +L K G L + G+ +R +C ++H HLL N A +++G+ LEE
Sbjct: 185 IMSPSTLSLLKWGADFGPLTL-TGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G S E+ IS GASG++FGL G L+ ++ +
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGET-----ISAGASGSIFGLYGIFLAFLLFHRIAKE 298
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLL 199
+ +T +++ +G N+ G GIDN AHIGG ++G +LG I ++
Sbjct: 299 QRKALLTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVV 344
>gi|150020441|ref|YP_001305795.1| rhomboid family protein [Thermosipho melanesiensis BI429]
gi|149792962|gb|ABR30410.1| Rhomboid family protein [Thermosipho melanesiensis BI429]
Length = 223
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
F P+ L L G +V G+ YR + M++H IHL+ N A+ F+G +E
Sbjct: 24 KFFIPNEVMLYLLFGAQYGPLVSSGQWYRIVTAMFVHGGFIHLVFNMYALYFLGRIVENV 83
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
+G + Y +G G L + S SVGASGA+FGL+G + T Y
Sbjct: 84 YGTDKFLFFYFSTGIIGNLATQFFYYNS-----FSVGASGAIFGLVGVLFAAGFRRDTPY 138
Query: 153 TNKCVSITMLILVIGVNMAIGFMPG--IDNMAHIGGFVAGILLGFILLLRPQYGY 205
T K ++ T + +I VN+ +GF+PG I+N AH+GGF++G+ LG+ + P Y Y
Sbjct: 139 TLKPITGTAFLPMILVNIFLGFIPGSNINNAAHLGGFLSGMALGYFI---PIYEY 190
>gi|384485233|gb|EIE77413.1| hypothetical protein RO3G_02117 [Rhizopus delemar RA 99-880]
Length = 358
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
T TL++L G + +R +++HA VIH L N L L +GV LE G R
Sbjct: 197 DTCTLEQLCGYGGFPDGTPHQSFRLILPIFMHAGVIHFLMNMLTHLRLGVDLERALGTPR 256
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+LY+ SG G +LS + Q L S G SGALFGL+G +++ NW + +
Sbjct: 257 YVVLYMASGIYGFVLSAM----LSQNLSASTGCSGALFGLIGYMFIDVLVNWKVLPHPVR 312
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIG 185
+ L++ +++ +G +PG+DN AHIG
Sbjct: 313 DLMSLLVSTIISLVLGLLPGLDNFAHIG 340
>gi|119482167|ref|XP_001261112.1| S54 (rhomboid) family peptidase, putative [Neosartorya fischeri
NRRL 181]
gi|119409266|gb|EAW19215.1| S54 (rhomboid) family peptidase, putative [Neosartorya fischeri
NRRL 181]
Length = 524
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 85/160 (53%), Gaps = 9/160 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LH +IH+ N L + + +E G+ R +Y+ SG G +L +
Sbjct: 256 QWFRFIIPMFLHTGIIHIGFNLLVQMTMAADMERTVGWWRFAFVYLASGIWGFVLGGNYA 315
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ + S G SG+LFG+L + +++ W ++ + +++L I ++ +G +PG
Sbjct: 316 AQGES----SCGCSGSLFGILALYILDLLYTWGERSSPWAELVIMVLGIAISFVLGLLPG 371
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
+DN +HIGGFV G+ G ++ LR + G PY+A
Sbjct: 372 LDNFSHIGGFVMGLASGLCIMRSPNALRERIGLARNPYVA 411
>gi|237723366|ref|ZP_04553847.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229447888|gb|EEO53679.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 584
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST +L K G L + G+ +R +C ++H HLL N A +++G+ LEE
Sbjct: 177 IMSPSTLSLLKWGADFGPLTL-TGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 235
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G S E+ IS GASG++FGL G L+ ++ +
Sbjct: 236 GGRRMFVSYLLTGLCSAAFSLYMHGET-----ISTGASGSIFGLYGIFLAFLLFHRIAKE 290
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLL 199
+ +T +++ +G N+ G GIDN AHIGG ++G +LG I ++
Sbjct: 291 QRKALLTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVV 336
>gi|169615256|ref|XP_001801044.1| hypothetical protein SNOG_10784 [Phaeosphaeria nodorum SN15]
gi|111061058|gb|EAT82178.1| hypothetical protein SNOG_10784 [Phaeosphaeria nodorum SN15]
Length = 521
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 87/153 (56%), Gaps = 4/153 (2%)
Query: 50 RNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGG 109
R+ + +RF ++LHA +IH+ N L L +G +E++ G LR L+Y +G G
Sbjct: 233 RDRSHEPNQWWRFIVPIFLHAGIIHIGFNMLLQLTLGRDMEKEIGPLRFALVYFSAGIFG 292
Query: 110 GLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVN 169
+L + + SVGASG+LFG+L +L +++ W+ + + L+L I +
Sbjct: 293 FVLGGNYAADGLS----SVGASGSLFGILALTLLDLLYTWSTRRSPVKDLLFLLLDIAIA 348
Query: 170 MAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+G +PG+DN +HIGGF+ G++LG LL PQ
Sbjct: 349 FVLGLLPGLDNFSHIGGFLMGLVLGVCLLHSPQ 381
>gi|85102797|ref|XP_961391.1| hypothetical protein NCU01305 [Neurospora crassa OR74A]
gi|16944591|emb|CAC18292.2| related to membrane protein [Neurospora crassa]
gi|28922936|gb|EAA32155.1| predicted protein [Neurospora crassa OR74A]
Length = 548
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 89/164 (54%), Gaps = 12/164 (7%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+TAT++ V + +RF + M+LHA VIH+ N L + IG ++E G +R
Sbjct: 268 ATATMES--------VPEPNQWWRFITPMFLHAGVIHIGFNMLLQMTIGKEMERSIGSIR 319
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
++YV +G G ++ QT GASGALFG++ L +++ +W +
Sbjct: 320 FFIVYVSAGIFGFVMGGNFAANGMQT----TGASGALFGIIALLLLDLLYSWRDRKSPWK 375
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
+ + L I ++ +G +PG+DN AHIGGF+AG+ LG +L P
Sbjct: 376 DLLFIGLDIVISFVLGLLPGLDNFAHIGGFLAGLALGICVLQSP 419
>gi|336417117|ref|ZP_08597446.1| hypothetical protein HMPREF1017_04554 [Bacteroides ovatus
3_8_47FAA]
gi|335936742|gb|EGM98660.1| hypothetical protein HMPREF1017_04554 [Bacteroides ovatus
3_8_47FAA]
Length = 592
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 6/166 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST +L K G L + G+ +R +C ++H HLL N A +++G+ LEE
Sbjct: 185 IMSPSTLSLLKWGADFGPLTL-TGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G S E+ IS GASG++FGL G L+ ++ +
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGET-----ISAGASGSIFGLYGIFLAFLLFHRIAKE 298
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLL 199
+ +T +++ +G N+ G GIDN AHIGG ++G +LG I ++
Sbjct: 299 QRKALLTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVV 344
>gi|328773737|gb|EGF83774.1| hypothetical protein BATDEDRAFT_3368, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 293
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 88/150 (58%), Gaps = 4/150 (2%)
Query: 55 YDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
+ + +RFF + LH ++H+L N L G++LE+D G+ R+ L+Y+ SG GG +
Sbjct: 102 HPDQWFRFFVPIMLHGGIVHILFNMSFQLQTGLQLEKDMGWWRMALIYIGSGVGGFVFGA 161
Query: 115 LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF 174
D SVGASG+L+G++ L ++I NW+L + + ++ I ++ +G
Sbjct: 162 SLSDVRVP----SVGASGSLYGMVACLLLDLIQNWSLIKRPWIELLKMVGNIIFSLLLGM 217
Query: 175 MPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+P IDN+AH+GGF+ GI LG + + + +G
Sbjct: 218 LPYIDNLAHVGGFITGICLGILFMPKIYFG 247
>gi|418635278|ref|ZP_13197657.1| peptidase, S54 family [Staphylococcus lugdunensis VCU139]
gi|374842000|gb|EHS05452.1| peptidase, S54 family [Staphylococcus lugdunensis VCU139]
Length = 485
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 94/159 (59%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH N H+L N L++ G +E G ++
Sbjct: 181 SNIKLLDMGGLVHFNVVH-GEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVEAIIGPMK 239
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +LY++SG G LS S T +S GASGA+FGL+GA + +I + +Y+ K +
Sbjct: 240 MLILYIISGLFGNFLSL-----SFNTDTVSAGASGAIFGLIGAIIVMMIIS-KVYSRKMI 293
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI + ++ + ++ MAH+GGF++G+LL +I
Sbjct: 294 GQLLIALVILIGFSL-LLSNVNIMAHLGGFISGLLLIYI 331
>gi|354557489|ref|ZP_08976747.1| Peptidase S54, rhomboid domain protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353550283|gb|EHC19720.1| Peptidase S54, rhomboid domain protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 325
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/167 (35%), Positives = 91/167 (54%), Gaps = 10/167 (5%)
Query: 33 SLFGPSTATLKK-LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEE 91
+L G ST T L G N ++ G+++R F+ M++H +HL N A+ +G EE
Sbjct: 166 TLAGGSTNTKNLILFGAKVNELILQGQVWRLFTSMFIHIGFLHLAFNIYALWILGSFSEE 225
Query: 92 DFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTL 151
FG R +Y+LSG G + S L D +S GASGA+FG+LGA + N L
Sbjct: 226 RFGRWRFLFIYLLSGLAGSVTSFLFTDA------LSAGASGAIFGILGALVPYSWKNPRL 279
Query: 152 YTNKCVSITMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFIL 197
+ K L+++I +N+ IG + P ID AH+GG + G+ +GF+
Sbjct: 280 W--KSGFGKNLVVIIAINLGIGLIQPQIDIYAHLGGLLIGLAIGFLF 324
>gi|345100279|gb|AEN69415.1| rhomboid-like protease 4 [Eimeria tenella]
Length = 558
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 74/148 (50%), Gaps = 5/148 (3%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
P++ L GGL N + GE++R FS M+LH +H+ N L + LE D+GF
Sbjct: 236 PNSRILTAFGGLETNYIRNYGEVFRVFSAMYLHGGFLHIAINLLCQIQSLWMLEPDWGFW 295
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
R LL+ + G G LLS + I+VG+SGA++ L+GA + + W C
Sbjct: 296 RTALLFFVGGISGNLLSAVADP-----CNITVGSSGAMYSLMGALIPYCVEYWKTIPRPC 350
Query: 157 VSITMLILVIGVNMAIGFMPGIDNMAHI 184
+ I+V+ + + G DN AHI
Sbjct: 351 CILMFFIVVLLIGIVTGLSGFTDNYAHI 378
>gi|325264281|ref|ZP_08131012.1| putative small hydrophobic molecule transporter protein
[Clostridium sp. D5]
gi|324030352|gb|EGB91636.1| putative small hydrophobic molecule transporter protein
[Clostridium sp. D5]
Length = 223
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 99/174 (56%), Gaps = 10/174 (5%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
+E+SLF + + G + VV + YR F+ ++LH + HLL N + + +G L
Sbjct: 52 TEDSLF------MLEHGAMYEPYVVEGHQYYRMFTSLFLHFGIEHLLNNMVLLGALGWNL 105
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E + G ++ ++Y +SG GG +LS L + S + +S GASGA+FGL+GA L ++ N
Sbjct: 106 ELETGRIKFLIIYFISGLGGNMLS-LWMNMSTDKMVVSAGASGAIFGLMGALLCVVLKNH 164
Query: 150 TLYTNKCVSITMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ + +L +V+ +++ GF G+DN AHIGG V G ++ +L RP+
Sbjct: 165 G-RVGRLTNRGLLFMVV-LSLYFGFTSSGVDNAAHIGGLVCGFVMAAVLYRRPK 216
>gi|444727806|gb|ELW68284.1| Inactive rhomboid protein 2 [Tupaia chinensis]
Length = 1213
Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats.
Identities = 61/192 (31%), Positives = 94/192 (48%), Gaps = 22/192 (11%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA VIH L + + + + LE+ G+ RI +++VLSG G L S +
Sbjct: 941 QFYRLWLSLFLHAGVIHCLVSVVFQMTVLRDLEKLAGWHRIAIIFVLSGITGNLASAIFL 1000
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L V+ A G +P
Sbjct: 1001 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLHLSAVMLFLFACGLLPW 1055
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLL---WV- 233
IDN+AHI GF++G+LL F L PYI G ++K +LL W
Sbjct: 1056 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRKRALILSWQLLERPWKA 1105
Query: 234 ---ISVVVLFVW 242
+S V+LF++
Sbjct: 1106 FLHLSAVMLFLF 1117
>gi|116514421|ref|YP_813327.1| membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|116093736|gb|ABJ58889.1| Membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
Length = 223
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 93/176 (52%), Gaps = 14/176 (7%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
ST+ L K+G + VV +G+ +R F+ +LH ++H+ +N++ I +IG E FG R
Sbjct: 32 STSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHWR 91
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASL-----SEIITNWTLY 152
L+Y+LSG GG LL+ ++ IS GAS ALFGL G + T +
Sbjct: 92 FLLIYLLSGVGGSLLTLAFGNDQ----AISAGASTALFGLFGPMTCAGFKDKDNTLLSFL 147
Query: 153 TNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+ +++ ++ LV+ V FMP +D + H+GG + G LL IL GY G
Sbjct: 148 GRQALALAVINLVLDV-----FMPDVDILGHLGGLITGALLAVILGDATYKGYGKG 198
>gi|374581478|ref|ZP_09654572.1| putative membrane protein [Desulfosporosinus youngiae DSM 17734]
gi|374417560|gb|EHQ89995.1| putative membrane protein [Desulfosporosinus youngiae DSM 17734]
Length = 313
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 86/156 (55%), Gaps = 8/156 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GEI+RFF+ M++H +HL+ N A +G +EE FG R +Y LSG
Sbjct: 166 GAKVNSLIQAGEIWRFFTSMFIHIGFMHLIFNLYAFWSLGPFIEERFGHWRFFTIYSLSG 225
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
GG + S +S GASGA+FGLLGA I +L+ + +L+L+I
Sbjct: 226 LGGSIASFFFSPA------LSAGASGAIFGLLGALFYYSIKRPSLWKSGLGMNLVLVLLI 279
Query: 167 GVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ + MPGIDN AH+GG + GI+ ILL +P
Sbjct: 280 NLGFGLT-MPGIDNFAHLGGLLTGIITS-ILLTKPD 313
>gi|432868050|ref|XP_004071386.1| PREDICTED: inactive rhomboid protein 1-like [Oryzias latipes]
Length = 860
Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats.
Identities = 53/184 (28%), Positives = 89/184 (48%), Gaps = 23/184 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + I LE+ G+LRI ++Y+LSG G L S +
Sbjct: 657 QFYRLWLSLFLHAGILHCLVSVVFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 716
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 717 -----PYRAEVGPAGSQFGILACLFVELFQSWQILAEPWRAFIKLLCVVIFLFIFGLLPW 771
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G L F L PYI+ G + ++K +I +
Sbjct: 772 IDNFAHISGFISGFFLSFAFL----------PYISFG--------RMDLYRKRCQIIVFL 813
Query: 238 VLFV 241
++FV
Sbjct: 814 LVFV 817
>gi|420199483|ref|ZP_14705161.1| rhomboid family protein [Staphylococcus epidermidis NIHLM031]
gi|394272265|gb|EJE16734.1| rhomboid family protein [Staphylococcus epidermidis NIHLM031]
Length = 486
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 32/205 (15%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTSTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL 217
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I GY
Sbjct: 295 GQLLIALVVLIGFSL-FMSNINIMAHLGGFISGVLITLI-------GYY----------- 335
Query: 218 NHKKPKYQCHQKLLWVISVVVLFVW 242
++ H+ L W +V L ++
Sbjct: 336 ------FKTHRSLFWAFLIVFLLIF 354
>gi|416125288|ref|ZP_11595886.1| rhomboid family protein [Staphylococcus epidermidis FRI909]
gi|420178246|ref|ZP_14684579.1| rhomboid family protein [Staphylococcus epidermidis NIHLM057]
gi|420180055|ref|ZP_14686315.1| rhomboid family protein [Staphylococcus epidermidis NIHLM053]
gi|319400885|gb|EFV89104.1| rhomboid family protein [Staphylococcus epidermidis FRI909]
gi|394246872|gb|EJD92124.1| rhomboid family protein [Staphylococcus epidermidis NIHLM057]
gi|394251487|gb|EJD96572.1| rhomboid family protein [Staphylococcus epidermidis NIHLM053]
Length = 486
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 32/205 (15%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTSTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL 217
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I GY
Sbjct: 295 GQLLIALVVLIGFSL-FMSNINIMAHLGGFISGVLITLI-------GYY----------- 335
Query: 218 NHKKPKYQCHQKLLWVISVVVLFVW 242
++ H+ L W +V L ++
Sbjct: 336 ------FKTHRSLFWAFLIVFLLIF 354
>gi|326428155|gb|EGD73725.1| hypothetical protein PTSG_05431 [Salpingoeca sp. ATCC 50818]
Length = 745
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 95/193 (49%), Gaps = 6/193 (3%)
Query: 6 CPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSC 65
C ++ G + + DH S +S+ L + LK G S + YRFF+
Sbjct: 494 CTQSNGTCQVLTRDHCTFLSGIWQSDAQLCS-DVSCLKHTCGFSMKDPSEPNQWYRFFTS 552
Query: 66 MWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQ 125
+++HA +IH+ + +E GFLR+ L+Y ++ GG L+S + L
Sbjct: 553 IFVHAGIIHIFIVATFQWTAAAAVERKCGFLRMLLMYTIACVGGNLVSGIFS-----PLY 607
Query: 126 ISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIG 185
VGA+G +FG+LG S+ ++ +W + + L++ I V IG +P IDN AHIG
Sbjct: 608 PQVGAAGGVFGVLGISIVDLFHSWPVIERPMSKLLSLLIEIAVLFFIGTLPWIDNFAHIG 667
Query: 186 GFVAGILLGFILL 198
GFV G + + L
Sbjct: 668 GFVFGAVSAVVFL 680
>gi|418035808|ref|ZP_12674250.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
gi|354689374|gb|EHE89372.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
Length = 215
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 94/177 (53%), Gaps = 14/177 (7%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
ST+ L ++G + VV +G+ +R F+ +LH ++H+ +N++ I +IG E FG
Sbjct: 23 ESTSVLLEMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 82
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASL-----SEIITNWTL 151
R L+Y+LSG GG LL+ ++ IS GAS ALFGL GA + T +
Sbjct: 83 RFLLIYLLSGVGGSLLTLAFGNDQ----AISAGASTALFGLFGAMTCAGFKDKDNTLLSF 138
Query: 152 YTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+ +++ ++ LV+ V FMP +D + H+GG + G LL IL GY G
Sbjct: 139 LGRQALALAVINLVLDV-----FMPDVDILGHLGGLITGALLAVILGDATYKGYGKG 190
>gi|418633195|ref|ZP_13195612.1| peptidase, S54 family [Staphylococcus epidermidis VCU129]
gi|420190163|ref|ZP_14696107.1| rhomboid family protein [Staphylococcus epidermidis NIHLM037]
gi|420204465|ref|ZP_14710023.1| rhomboid family protein [Staphylococcus epidermidis NIHLM015]
gi|374840014|gb|EHS03521.1| peptidase, S54 family [Staphylococcus epidermidis VCU129]
gi|394259054|gb|EJE03924.1| rhomboid family protein [Staphylococcus epidermidis NIHLM037]
gi|394273475|gb|EJE17906.1| rhomboid family protein [Staphylococcus epidermidis NIHLM015]
Length = 486
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 32/205 (15%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTSTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL 217
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I GY
Sbjct: 295 GQLLIALVVLIGFSL-FMSNINIMAHLGGFISGVLITLI-------GYY----------- 335
Query: 218 NHKKPKYQCHQKLLWVISVVVLFVW 242
++ H+ L W +V L ++
Sbjct: 336 ------FKTHRSLFWAFLIVFLLIF 354
>gi|242242821|ref|ZP_04797266.1| rhomboid family protein [Staphylococcus epidermidis W23144]
gi|420174687|ref|ZP_14681135.1| rhomboid family protein [Staphylococcus epidermidis NIHLM061]
gi|420192300|ref|ZP_14698160.1| rhomboid family protein [Staphylococcus epidermidis NIHLM023]
gi|242233722|gb|EES36034.1| rhomboid family protein [Staphylococcus epidermidis W23144]
gi|394244591|gb|EJD89926.1| rhomboid family protein [Staphylococcus epidermidis NIHLM061]
gi|394261511|gb|EJE06308.1| rhomboid family protein [Staphylococcus epidermidis NIHLM023]
Length = 486
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 32/205 (15%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTSTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL 217
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I GY
Sbjct: 295 GQLLIALVVLIGFSL-FMSNINIMAHLGGFISGVLITLI-------GYY----------- 335
Query: 218 NHKKPKYQCHQKLLWVISVVVLFVW 242
++ H+ L W +V L ++
Sbjct: 336 ------FKAHRSLFWAFLIVFLLIF 354
>gi|255952919|ref|XP_002567212.1| Pc21g01420 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588923|emb|CAP95039.1| Pc21g01420 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 10/175 (5%)
Query: 43 KKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLY 102
++GG + + + + YRF +++H IH+ N L + +G +E G R L Y
Sbjct: 232 PRIGGSTDDQPAPN-QWYRFIIPIFMHGGFIHIGFNLLVQMTMGADMERLIGMWRYTLTY 290
Query: 103 VLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITML 162
SG G +L + + L S G SGALFG+L L +++ W + V + ++
Sbjct: 291 FASGIFGFVLGGNYAAQ----LDPSDGCSGALFGILALYLLDLLYEWPQRESPWVELIIM 346
Query: 163 ILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
IL +GV+ +G +PG+DN +HIGGF+ G+ +G ++ LR + G PY+A
Sbjct: 347 ILGVGVSFVLGLLPGLDNFSHIGGFIMGLAIGMTIMRSPNALRERIGLARQPYVA 401
>gi|418630551|ref|ZP_13193032.1| peptidase, S54 family [Staphylococcus epidermidis VCU128]
gi|374837741|gb|EHS01304.1| peptidase, S54 family [Staphylococcus epidermidis VCU128]
Length = 486
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 105/205 (51%), Gaps = 32/205 (15%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTSTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL 217
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I GY
Sbjct: 295 GQLLIALVVLIGFSL-FMSNINIMAHLGGFISGVLITLI-------GYY----------- 335
Query: 218 NHKKPKYQCHQKLLWVISVVVLFVW 242
++ H+ L W +V L ++
Sbjct: 336 ------FKTHRSLFWAFLIVFLLIF 354
>gi|373859031|ref|ZP_09601763.1| Rhomboid family protein [Bacillus sp. 1NLA3E]
gi|372451122|gb|EHP24601.1| Rhomboid family protein [Bacillus sp. 1NLA3E]
Length = 522
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/164 (37%), Positives = 92/164 (56%), Gaps = 16/164 (9%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
++ TL K G L++ +G+ +RF + +++H +HL+ NS+A+ +IG +E +G R
Sbjct: 207 NSTTLIKFGAKFNPLII-EGQWWRFLTPIFIHIGFLHLIMNSIALYYIGPLVERIYGNFR 265
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
L+Y+ +GF G L S + +S GASGA+FG GA L + L K
Sbjct: 266 FILIYLFAGFTGVLASFAF------SANLSAGASGAIFGCFGALLY-----FGLIYPKLF 314
Query: 158 SITM---LILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFIL 197
TM +++VIG+N+A GF M GIDN HIGG + G L IL
Sbjct: 315 FRTMGMNILVVIGLNLAFGFSMQGIDNAGHIGGLIGGFLASGIL 358
>gi|451997902|gb|EMD90367.1| hypothetical protein COCHEDRAFT_1179059 [Cochliobolus
heterostrophus C5]
Length = 535
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/145 (33%), Positives = 85/145 (58%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF + M+LHA VIH+ N L +G +E++ G LR L+Y +G G +L +
Sbjct: 273 QWWRFITPMFLHAGVIHIGFNMLLQWTLGRDMEKEIGPLRFALVYFSAGIFGFVLGGNYA 332
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ SVG SG+LFG+L +L +++ NW+ + + ++L + + IG +PG
Sbjct: 333 PDGI----TSVGCSGSLFGILALTLLDLLYNWSTRRSPVKDLIFILLDMAIAFVIGLLPG 388
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF+ G++LG ++ P+
Sbjct: 389 LDNFSHIGGFLMGLVLGICIIHSPE 413
>gi|408397516|gb|EKJ76658.1| hypothetical protein FPSE_03208 [Fusarium pseudograminearum CS3096]
Length = 570
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 81/142 (57%), Gaps = 4/142 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
YRF + +++HA +IH++ N L L I ++E G +R L+Y+ +G G ++ +
Sbjct: 333 YRFITSIFMHAGIIHIVFNLLLQLTIAKEMEMAIGPVRFLLVYMSAGIFGNIMGGNYAPP 392
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
Q SVGASGALFG++ L +++ +W + + ++L + + +G +PG+D
Sbjct: 393 GQP----SVGASGALFGIIALVLLDLLYSWKDRRSPVKDLLFIVLDMVIAFVLGLLPGLD 448
Query: 180 NMAHIGGFVAGILLGFILLLRP 201
N HIGGF+ G+ LG +L P
Sbjct: 449 NFVHIGGFLMGLSLGVCVLHSP 470
>gi|251778447|ref|ZP_04821367.1| rhomboid family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082762|gb|EES48652.1| rhomboid family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 321
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 8/153 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++Y GE++R +C +LH + HLL N A+ +G ++E+ FG + ++Y +S
Sbjct: 172 GAKYNPLIYQGEVWRLVTCAFLHGGITHLLFNMYALYILGPQVEKIFGIKKYLIIYFVSA 231
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
L + ISVGASGA+FGLLGA L + + + + I LI VI
Sbjct: 232 ITSSSLGVALNKNT-----ISVGASGAIFGLLGAIL--VFSIKQRHKVEKEYILNLIGVI 284
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGILLGFILL 198
+N+ IGF + IDN+ HIGGF+ G+++ IL+
Sbjct: 285 ILNLLIGFNISNIDNLGHIGGFLGGVIMARILI 317
>gi|402074200|gb|EJT69729.1| rhomboid family membrane protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 587
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 87/165 (52%), Gaps = 9/165 (5%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
V + +RF + +++HA +IH+ N L L IG +E G LR L+Y+ +G G ++
Sbjct: 317 VPAPNQWFRFITPIFMHAGLIHIGFNLLLQLTIGRDMEMSIGTLRFFLVYMSAGIFGFVM 376
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAI 172
T S GASG+LFG++ +L +++ +W N + + L + ++ +
Sbjct: 377 G----GNFAATGIASTGASGSLFGIIALTLLDLLYSWKDRKNPTKDLLFIFLDVAISFVL 432
Query: 173 GFMPGIDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
G +PG+DN +HIGGF+ G+ LG LL LR + G PY
Sbjct: 433 GLLPGLDNFSHIGGFLMGLALGVCLLHSPNSLRRRIGTDDPPYTP 477
>gi|418411961|ref|ZP_12985227.1| hypothetical protein HMPREF9281_00831 [Staphylococcus epidermidis
BVS058A4]
gi|410891544|gb|EKS39341.1| hypothetical protein HMPREF9281_00831 [Staphylococcus epidermidis
BVS058A4]
Length = 486
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTTTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I
Sbjct: 295 GQLLIALVVLIVFSL-FMSNINIMAHLGGFISGVLITLI 332
>gi|310792586|gb|EFQ28113.1| rhomboid family protein [Glomerella graminicola M1.001]
Length = 561
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 84/145 (57%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF + ++LHA +IH+ N L + IG ++E G +R L+Y+ +G G ++ +
Sbjct: 322 QWFRFITPIFLHAGLIHIGFNLLLQMTIGKEMEVAIGSIRFFLVYLSAGIFGNVMGANYA 381
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ S GASGALFG++ +L +++ +W + + ++L + ++ +G +PG
Sbjct: 382 G----VMAASTGASGALFGVIALTLLDLLYSWKDRRSPVKDLMFIMLDVVISFVLGLLPG 437
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN AHIGGF+ G+ LG +L P
Sbjct: 438 LDNFAHIGGFLMGLALGVCVLHSPN 462
>gi|418614697|ref|ZP_13177659.1| peptidase, S54 family [Staphylococcus epidermidis VCU118]
gi|374819233|gb|EHR83361.1| peptidase, S54 family [Staphylococcus epidermidis VCU118]
Length = 486
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTSTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I
Sbjct: 295 GQLLIALVVLIGFSL-FMSNINIMAHLGGFISGVLITLI 332
>gi|157363715|ref|YP_001470482.1| rhomboid family protein [Thermotoga lettingae TMO]
gi|157314319|gb|ABV33418.1| Rhomboid family protein [Thermotoga lettingae TMO]
Length = 228
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 7/153 (4%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
+V DGE YR + +++H ++HLL NS A+ + G +E +G + Y+ +G G +
Sbjct: 47 LVSDGEWYRLITAIFVHGGLLHLLFNSYALFYFGTIVESVYGPEKFIFSYLATGVVGNIA 106
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAI 172
+ L + ISVGASG++FGL+G S T + K + L+ +I N+
Sbjct: 107 THLFYYRA-----ISVGASGSIFGLVGILFSLGFRRDTPFFMKQFTGYALLPMILFNIIY 161
Query: 173 GFMP--GIDNMAHIGGFVAGILLGFILLLRPQY 203
GF+P GI+N AH+GGF G+LLG++L RP Y
Sbjct: 162 GFIPGSGINNAAHVGGFALGMLLGYLLSPRPAY 194
>gi|418606637|ref|ZP_13169907.1| peptidase, S54 family [Staphylococcus epidermidis VCU057]
gi|374407413|gb|EHQ78275.1| peptidase, S54 family [Staphylococcus epidermidis VCU057]
Length = 477
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTTTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I
Sbjct: 295 GQLLIALVVLIVFSL-FMSNINIMAHLGGFISGVLITLI 332
>gi|420163079|ref|ZP_14669826.1| rhomboid family protein [Staphylococcus epidermidis NIHLM095]
gi|420167946|ref|ZP_14674598.1| rhomboid family protein [Staphylococcus epidermidis NIHLM087]
gi|394234768|gb|EJD80342.1| rhomboid family protein [Staphylococcus epidermidis NIHLM095]
gi|394237974|gb|EJD83460.1| rhomboid family protein [Staphylococcus epidermidis NIHLM087]
Length = 486
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTTTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I
Sbjct: 295 GQLLIALVVLIVFSL-FMSNINIMAHLGGFISGVLITLI 332
>gi|27468153|ref|NP_764790.1| hypothetical protein SE1235 [Staphylococcus epidermidis ATCC 12228]
gi|57867074|ref|YP_188690.1| rhomboid family protein [Staphylococcus epidermidis RP62A]
gi|251810965|ref|ZP_04825438.1| S54 family peptidase [Staphylococcus epidermidis BCM-HMP0060]
gi|282876025|ref|ZP_06284892.1| peptidase, S54 (rhomboid) family protein [Staphylococcus
epidermidis SK135]
gi|293366490|ref|ZP_06613167.1| rhomboid family protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417646984|ref|ZP_12296833.1| peptidase, S54 family [Staphylococcus epidermidis VCU144]
gi|417656060|ref|ZP_12305751.1| peptidase, S54 family [Staphylococcus epidermidis VCU028]
gi|417659640|ref|ZP_12309240.1| peptidase, S54 family [Staphylococcus epidermidis VCU045]
gi|417908746|ref|ZP_12552503.1| peptidase, S54 family [Staphylococcus epidermidis VCU037]
gi|417912278|ref|ZP_12555973.1| peptidase, S54 family [Staphylococcus epidermidis VCU105]
gi|417913747|ref|ZP_12557410.1| peptidase, S54 family [Staphylococcus epidermidis VCU109]
gi|418609437|ref|ZP_13172589.1| peptidase, S54 family [Staphylococcus epidermidis VCU065]
gi|418612797|ref|ZP_13175821.1| peptidase, S54 family [Staphylococcus epidermidis VCU117]
gi|418616300|ref|ZP_13179225.1| peptidase, S54 family [Staphylococcus epidermidis VCU120]
gi|418625262|ref|ZP_13187915.1| peptidase, S54 family [Staphylococcus epidermidis VCU125]
gi|418626366|ref|ZP_13188978.1| peptidase, S54 family [Staphylococcus epidermidis VCU126]
gi|418629382|ref|ZP_13191890.1| peptidase, S54 family [Staphylococcus epidermidis VCU127]
gi|418665219|ref|ZP_13226669.1| peptidase, S54 family [Staphylococcus epidermidis VCU081]
gi|419771673|ref|ZP_14297719.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-K]
gi|420165544|ref|ZP_14672235.1| rhomboid family protein [Staphylococcus epidermidis NIHLM088]
gi|420170258|ref|ZP_14676819.1| rhomboid family protein [Staphylococcus epidermidis NIHLM070]
gi|420183211|ref|ZP_14689344.1| rhomboid family protein [Staphylococcus epidermidis NIHLM049]
gi|420194847|ref|ZP_14700644.1| rhomboid family protein [Staphylococcus epidermidis NIHLM021]
gi|420197429|ref|ZP_14703153.1| rhomboid family protein [Staphylococcus epidermidis NIHLM020]
gi|420201679|ref|ZP_14707289.1| rhomboid family protein [Staphylococcus epidermidis NIHLM018]
gi|420206132|ref|ZP_14711642.1| rhomboid family protein [Staphylococcus epidermidis NIHLM008]
gi|420209055|ref|ZP_14714493.1| rhomboid family protein [Staphylococcus epidermidis NIHLM003]
gi|420214009|ref|ZP_14719289.1| rhomboid family protein [Staphylococcus epidermidis NIH05005]
gi|420221664|ref|ZP_14726591.1| peptidase, S54 family [Staphylococcus epidermidis NIH08001]
gi|420225746|ref|ZP_14730573.1| peptidase, S54 family [Staphylococcus epidermidis NIH06004]
gi|420227336|ref|ZP_14732107.1| peptidase, S54 family [Staphylococcus epidermidis NIH05003]
gi|420229653|ref|ZP_14734358.1| peptidase, S54 family [Staphylococcus epidermidis NIH04003]
gi|420234711|ref|ZP_14739271.1| peptidase, S54 family [Staphylococcus epidermidis NIH051475]
gi|421606956|ref|ZP_16048207.1| rhomboid family protein [Staphylococcus epidermidis AU12-03]
gi|27315699|gb|AAO04834.1|AE016748_68 conserved hypothetical protein [Staphylococcus epidermidis ATCC
12228]
gi|57637732|gb|AAW54520.1| rhomboid family protein [Staphylococcus epidermidis RP62A]
gi|251805475|gb|EES58132.1| S54 family peptidase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295050|gb|EFA87577.1| peptidase, S54 (rhomboid) family protein [Staphylococcus
epidermidis SK135]
gi|291319259|gb|EFE59628.1| rhomboid family protein [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329725333|gb|EGG61816.1| peptidase, S54 family [Staphylococcus epidermidis VCU144]
gi|329735277|gb|EGG71569.1| peptidase, S54 family [Staphylococcus epidermidis VCU045]
gi|329737310|gb|EGG73564.1| peptidase, S54 family [Staphylococcus epidermidis VCU028]
gi|341651289|gb|EGS75094.1| peptidase, S54 family [Staphylococcus epidermidis VCU105]
gi|341654769|gb|EGS78507.1| peptidase, S54 family [Staphylococcus epidermidis VCU109]
gi|341656107|gb|EGS79830.1| peptidase, S54 family [Staphylococcus epidermidis VCU037]
gi|374407651|gb|EHQ78503.1| peptidase, S54 family [Staphylococcus epidermidis VCU065]
gi|374409194|gb|EHQ79994.1| peptidase, S54 family [Staphylococcus epidermidis VCU081]
gi|374817874|gb|EHR82049.1| peptidase, S54 family [Staphylococcus epidermidis VCU117]
gi|374821126|gb|EHR85193.1| peptidase, S54 family [Staphylococcus epidermidis VCU120]
gi|374825404|gb|EHR89340.1| peptidase, S54 family [Staphylococcus epidermidis VCU125]
gi|374832800|gb|EHR96505.1| peptidase, S54 family [Staphylococcus epidermidis VCU126]
gi|374834085|gb|EHR97745.1| peptidase, S54 family [Staphylococcus epidermidis VCU127]
gi|383360492|gb|EID37887.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-K]
gi|394235345|gb|EJD80917.1| rhomboid family protein [Staphylococcus epidermidis NIHLM088]
gi|394240596|gb|EJD86019.1| rhomboid family protein [Staphylococcus epidermidis NIHLM070]
gi|394249674|gb|EJD94887.1| rhomboid family protein [Staphylococcus epidermidis NIHLM049]
gi|394263907|gb|EJE08628.1| rhomboid family protein [Staphylococcus epidermidis NIHLM021]
gi|394266236|gb|EJE10882.1| rhomboid family protein [Staphylococcus epidermidis NIHLM020]
gi|394271947|gb|EJE16426.1| rhomboid family protein [Staphylococcus epidermidis NIHLM018]
gi|394277971|gb|EJE22288.1| rhomboid family protein [Staphylococcus epidermidis NIHLM008]
gi|394279283|gb|EJE23591.1| rhomboid family protein [Staphylococcus epidermidis NIHLM003]
gi|394283931|gb|EJE28092.1| rhomboid family protein [Staphylococcus epidermidis NIH05005]
gi|394290290|gb|EJE34154.1| peptidase, S54 family [Staphylococcus epidermidis NIH08001]
gi|394293180|gb|EJE36903.1| peptidase, S54 family [Staphylococcus epidermidis NIH06004]
gi|394297267|gb|EJE40870.1| peptidase, S54 family [Staphylococcus epidermidis NIH05003]
gi|394298947|gb|EJE42502.1| peptidase, S54 family [Staphylococcus epidermidis NIH04003]
gi|394303954|gb|EJE47364.1| peptidase, S54 family [Staphylococcus epidermidis NIH051475]
gi|406657425|gb|EKC83813.1| rhomboid family protein [Staphylococcus epidermidis AU12-03]
Length = 486
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTTTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I
Sbjct: 295 GQLLIALVVLIVFSL-FMSNINIMAHLGGFISGVLITLI 332
>gi|160935902|ref|ZP_02083276.1| hypothetical protein CLOBOL_00795 [Clostridium bolteae ATCC
BAA-613]
gi|158441144|gb|EDP18861.1| hypothetical protein CLOBOL_00795 [Clostridium bolteae ATCC
BAA-613]
Length = 206
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/169 (35%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 44 KLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYV 103
K G + V+ GE YR F+ M+LH V HL N L +L +G K+E G ++ + Y+
Sbjct: 41 KHGAVFAPFVILGGEYYRLFTAMFLHFGVSHLANNMLVLLVLGEKMERALGHIKYLIFYL 100
Query: 104 LSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI-ITNWTL--YTNKCVSIT 160
SG +S Q + Q +S GASGA+FG++G + I I + L TN+ +
Sbjct: 101 ASGVAANSISLAVQVRTGQA-SVSAGASGAIFGVVGGLVYVIAIHHGQLDGLTNRQLGFM 159
Query: 161 MLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+L+ + GF G+DNMAHIGG ++G +LG +L R +SG
Sbjct: 160 VLL-----TLYHGFTSAGVDNMAHIGGLISGFILGILLYRRKDAARISG 203
>gi|420211212|ref|ZP_14716586.1| rhomboid family protein [Staphylococcus epidermidis NIHLM001]
gi|394281665|gb|EJE25891.1| rhomboid family protein [Staphylococcus epidermidis NIHLM001]
Length = 486
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTTTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I
Sbjct: 295 GQLLIALVVLIVFSL-FMSNINIMAHLGGFISGVLITLI 332
>gi|420187246|ref|ZP_14693267.1| rhomboid family protein [Staphylococcus epidermidis NIHLM039]
gi|394256225|gb|EJE01158.1| rhomboid family protein [Staphylococcus epidermidis NIHLM039]
Length = 486
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTTTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I
Sbjct: 295 GQLLIALVVLIVFSL-FMSNINIMAHLGGFISGVLITLI 332
>gi|418621400|ref|ZP_13184176.1| peptidase, S54 family [Staphylococcus epidermidis VCU123]
gi|374829344|gb|EHR93148.1| peptidase, S54 family [Staphylococcus epidermidis VCU123]
Length = 394
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTTTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I
Sbjct: 295 GQLLIALVVLIVFSL-FMSNINIMAHLGGFISGVLITLI 332
>gi|315042361|ref|XP_003170557.1| rhomboid family membrane protein [Arthroderma gypseum CBS 118893]
gi|311345591|gb|EFR04794.1| rhomboid family membrane protein [Arthroderma gypseum CBS 118893]
Length = 498
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LHA ++H+ N A L IG +E G+ R ++Y SG G +L
Sbjct: 249 QWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERAIGWWRYAIVYFSSGIFGFVLG---- 304
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG LFG+ + ++ W V + +++ + ++ +G +PG
Sbjct: 305 GNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLMFMLITVAISFVLGLLPG 364
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF+ G++LG +L P
Sbjct: 365 LDNFSHIGGFLTGLVLGICILRSPD 389
>gi|307171848|gb|EFN63503.1| Rhomboid family member 1 [Camponotus floridanus]
Length = 925
Score = 84.0 bits (206), Expect = 5e-14, Method: Composition-based stats.
Identities = 52/184 (28%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR F+ ++LHA ++HL+ L F+ LE+ G LRI L+Y + G L S +
Sbjct: 718 QFYRLFTTIFLHAGIVHLVITLLIQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 777
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +GA F LL + E++ W + + +++ LIL++ + +G +P
Sbjct: 778 -----PYRAEVGPAGAHFALLATLVVEVLHCWPMLKHPRRALSKLILILVGLLMLGILPW 832
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
+DN AH+ GF+ G L + L+ P+I+ G+ Y +K+L + +
Sbjct: 833 VDNYAHLFGFIFGFLAAYALM----------PFISFGH--------YDRRRKILLIWVCL 874
Query: 238 VLFV 241
+L V
Sbjct: 875 ILIV 878
>gi|188589117|ref|YP_001920138.1| rhomboid family protein [Clostridium botulinum E3 str. Alaska E43]
gi|188499398|gb|ACD52534.1| rhomboid family protein [Clostridium botulinum E3 str. Alaska E43]
Length = 321
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 87/153 (56%), Gaps = 8/153 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++Y GE++R +C +LH + HLL N A+ +G ++E+ FG + ++Y +S
Sbjct: 172 GAKYNPLIYQGEVWRLVACAFLHGGITHLLFNMYALYILGPQVEKIFGIKKYLIIYFVSA 231
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
L + ISVGASGA+FGLLGA L + + + + I L+ VI
Sbjct: 232 ITSSSLGVALNKNT-----ISVGASGAIFGLLGAIL--VFSIKQRHKVEKEYILNLLGVI 284
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGILLGFILL 198
+N+ IGF + IDN+ HIGGF+ GI++ IL+
Sbjct: 285 ILNLLIGFNISNIDNLGHIGGFLGGIIMARILI 317
>gi|338730738|ref|YP_004660130.1| Rhomboid family protein [Thermotoga thermarum DSM 5069]
gi|335365089|gb|AEH51034.1| Rhomboid family protein [Thermotoga thermarum DSM 5069]
Length = 230
Score = 84.0 bits (206), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 89/155 (57%), Gaps = 9/155 (5%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
+V GE YR + M++H ++HLL NS A+ + G +E +G + + Y+L+G G L
Sbjct: 47 LVSGGEWYRVITAMFVHGGLLHLLFNSYALFYFGTIVESIYGTEKFVIFYLLAGAVGNLA 106
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT-LYTNKCVSITMLILVIGVNMA 171
+ + S ISVGASGA+FGL+G + T ++ + + +L ++I N+
Sbjct: 107 THVFYYRS-----ISVGASGAIFGLVGILFALGFRRDTPIFMRQFTGMALLPMII-FNVV 160
Query: 172 IGFMPG--IDNMAHIGGFVAGILLGFILLLRPQYG 204
GFMPG I+N AH+GGF+AG+ +G+ RP Y
Sbjct: 161 YGFMPGSNINNAAHLGGFLAGMAIGYFADPRPVYA 195
>gi|440895146|gb|ELR47408.1| Rhomboid family member 2 [Bos grunniens mutus]
Length = 846
Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA VIH L + + + I LE+ G+ RI ++++LSG G L S L
Sbjct: 643 QFYRLWLSLFLHAGVIHCLVSVIFQMTILRDLEKLAGWHRISIIFILSGITGNLASALFL 702
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 703 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPW 757
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN+AHI GF++G+LL F L PYI G ++K + L ++S+V
Sbjct: 758 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK-------RALILVSLV 800
Query: 238 VL 239
V
Sbjct: 801 VF 802
>gi|119912793|ref|XP_596084.3| PREDICTED: inactive rhomboid protein 2 [Bos taurus]
gi|297487396|ref|XP_002696211.1| PREDICTED: inactive rhomboid protein 2 [Bos taurus]
gi|296476011|tpg|DAA18126.1| TPA: rhomboid 5 homolog 2-like [Bos taurus]
Length = 825
Score = 84.0 bits (206), Expect = 6e-14, Method: Composition-based stats.
Identities = 57/182 (31%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA VIH L + + + I LE+ G+ RI ++++LSG G L S L
Sbjct: 622 QFYRLWLSLFLHAGVIHCLVSVIFQMTILRDLEKLAGWHRISIIFILSGITGNLASALFL 681
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 682 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPW 736
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN+AHI GF++G+LL F L PYI G ++K + L ++S+V
Sbjct: 737 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK-------RALILVSLV 779
Query: 238 VL 239
V
Sbjct: 780 VF 781
>gi|336472615|gb|EGO60775.1| hypothetical protein NEUTE1DRAFT_76205 [Neurospora tetrasperma FGSC
2508]
gi|350294152|gb|EGZ75237.1| rhomboid-domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 550
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 12/164 (7%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+TAT++ V + +RF + M+LHA VIH+ N L + IG ++E G +R
Sbjct: 268 ATATMES--------VPEPNQWWRFITPMFLHAGVIHIGFNMLLQMTIGKEMERSIGSIR 319
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
++YV +G G ++ QT GASGALFG++ L +++ +W +
Sbjct: 320 FFIVYVSAGIFGFVMGGNFAANGMQT----TGASGALFGIIALLLLDLLYSWRDRKSPWK 375
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
+ + L I ++ +G +PG+DN AHIGGF+ G+ LG +L P
Sbjct: 376 DLLFIGLDIVISFVLGLLPGLDNFAHIGGFLTGLALGICVLQSP 419
>gi|160886529|ref|ZP_02067532.1| hypothetical protein BACOVA_04540 [Bacteroides ovatus ATCC 8483]
gi|423289697|ref|ZP_17268547.1| hypothetical protein HMPREF1069_03590 [Bacteroides ovatus
CL02T12C04]
gi|156108414|gb|EDO10159.1| peptidase, S54 family [Bacteroides ovatus ATCC 8483]
gi|392667408|gb|EIY60918.1| hypothetical protein HMPREF1069_03590 [Bacteroides ovatus
CL02T12C04]
Length = 592
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 89/166 (53%), Gaps = 6/166 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST +L K G L + G+ +R +C ++H HLL N A +++G+ LEE
Sbjct: 185 IMSPSTLSLLKWGADFGPLTL-TGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G S E+ IS GASG++FGL G L+ ++ +
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGET-----ISAGASGSIFGLYGIFLAFLLFHRIAKE 298
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLL 199
+ + +++ +G N+ G GIDN AHIGG ++G +LG I ++
Sbjct: 299 QRKALLASILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVV 344
>gi|451337929|ref|ZP_21908468.1| rhomboid family serine protease [Amycolatopsis azurea DSM 43854]
gi|449419521|gb|EMD25056.1| rhomboid family serine protease [Amycolatopsis azurea DSM 43854]
Length = 320
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/168 (35%), Positives = 92/168 (54%), Gaps = 11/168 (6%)
Query: 40 ATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIG 99
+ L +LG LS + GE +R F+ +L ++H+ +N+ ++ F+G LE G +
Sbjct: 117 SALFQLGELSNPPTLAAGEWWRIFTSGFLQYGLLHIASNAFSLWFVGRPLETALGRVPFT 176
Query: 100 LLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSI 159
LY +S GG + + D + VGASGA+FGL+GA +I L N
Sbjct: 177 ALYFVSMLGGSAANLVFTDLDAAPV---VGASGAIFGLIGAYTVIVI---KLRLNP---- 226
Query: 160 TMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQYGYV 206
+ L++++G+N+ I F +PGI +AH GGFVAG+L F LL P+ V
Sbjct: 227 SWLLVILGLNVFITFQVPGISILAHAGGFVAGLLATFALLYAPEKNRV 274
>gi|374297549|ref|YP_005047740.1| hypothetical protein [Clostridium clariflavum DSM 19732]
gi|359827043|gb|AEV69816.1| putative membrane protein [Clostridium clariflavum DSM 19732]
Length = 517
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 93/165 (56%), Gaps = 10/165 (6%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N +++ GE +RF + ++LHA++ HL+ N L++ G +E +G + +Y ++G
Sbjct: 220 GAKENSLIFAGEYWRFLTPIFLHADLEHLIMNCLSLFVFGRIVEGMYGHKKFVFIYFMAG 279
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
G + S + S +VGASGA+FGL+GA L + N L+ K ++L++VI
Sbjct: 280 IMGSIASFMFSPHS------AVGASGAIFGLMGALLYFSVENPALFK-KYFGNSILLMVI 332
Query: 167 GVNMAIGFM-PGIDNMAHIGGFVAGILL-GFILLLRPQYGYVSGP 209
+N+ GF+ PGIDN HIGG + G L G + + + +S P
Sbjct: 333 -INLVYGFIRPGIDNYGHIGGLIGGFLASGIVKITKSPNKLLSRP 376
>gi|255728583|ref|XP_002549217.1| hypothetical protein CTRG_03514 [Candida tropicalis MYA-3404]
gi|240133533|gb|EER33089.1| hypothetical protein CTRG_03514 [Candida tropicalis MYA-3404]
Length = 680
Score = 83.6 bits (205), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 97/179 (54%), Gaps = 18/179 (10%)
Query: 42 LKKLGGLSRNLVVYDGEI------YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGF 95
L +L GLS + DG+ YR F ++LHA +H++ N L + +G +E + G
Sbjct: 309 LNELCGLSG--IPQDGDAWLPNQWYRIFIPIFLHAGFLHIIFNLLLQVTMGASIERNIGI 366
Query: 96 LRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII----TNWTL 151
L+ ++Y++SG GG LL + + Q + S GASGALFG++ ++ I N +
Sbjct: 367 LKYAIIYIVSGIGGFLLGA---NFTPQGIA-STGASGALFGIVATNIILFIYTGRKNTNM 422
Query: 152 YTNK--CVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
Y K + I ++I I + +G +PG+DN +H+GGF GIL +LL P + + G
Sbjct: 423 YGTKHYALFICIMIAEIVITFVLGLLPGLDNFSHLGGFAMGILTSILLLKDPFWVFKDG 481
>gi|451847170|gb|EMD60478.1| hypothetical protein COCSADRAFT_40121 [Cochliobolus sativus ND90Pr]
Length = 535
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 85/145 (58%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF + M+LHA VIH+ N L +G +E++ G LR L+Y +G G +L +
Sbjct: 273 QWWRFITPMFLHAGVIHIGFNMLLQWTLGRDMEKEIGPLRFALVYFSAGIFGFVLGGNYA 332
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ SVG SG+LFG+L +L +++ +W+ + + L+L + + IG +PG
Sbjct: 333 PDGI----TSVGCSGSLFGVLALTLLDLLYHWSTRRSPVKDLLFLLLDMAIAFVIGLLPG 388
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF+ G++LG +L P+
Sbjct: 389 LDNFSHIGGFLMGLVLGICILHSPE 413
>gi|331086792|ref|ZP_08335869.1| hypothetical protein HMPREF0987_02172 [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330409958|gb|EGG89393.1| hypothetical protein HMPREF0987_02172 [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 209
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ +E+ +F + G + ++ DGE YR F+ M+LH HL+ N +
Sbjct: 25 SFQGMTEDGIF------MFHHGAMYVPSMLEDGEYYRLFTSMFLHFGFEHLMNNMFILGV 78
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
IG LE + G + +Y+LSG G LLS D IS GASGA+FG++GA
Sbjct: 79 IGWNLELEIGKWKYLTVYLLSGLMGNLLSAW-MDIQTGEYAISAGASGAIFGVIGALFYV 137
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQY 203
+ N N +S L ++ ++ +GF G+DN AHIGG ++GILL IL + +Y
Sbjct: 138 ALRNRGRIGN--ISSRGLAFMVLCSLYLGFTSKGVDNSAHIGGVISGILLAAILYHKKKY 195
>gi|389576264|ref|ZP_10166292.1| putative membrane protein [Eubacterium cellulosolvens 6]
gi|389311749|gb|EIM56682.1| putative membrane protein [Eubacterium cellulosolvens 6]
Length = 215
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 92/163 (56%), Gaps = 4/163 (2%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
T + G + R L++ +GE +R F+ M++H + HL++N++++L IGV LE+ G +R L
Sbjct: 45 TAIRFGAMYRPLLM-EGEWWRLFTSMFVHFGMDHLVSNTISLLLIGVSLEQHCGHIRFLL 103
Query: 101 LYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT 160
+Y+L G G S L + S Q +S GASGA+F +LG ++ + W +++
Sbjct: 104 IYILGGLAGNGFSLLIEGGSPQQ-AVSAGASGAVFAILGGYIALALI-WKRTGVANINLV 161
Query: 161 MLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
+ I+ G G++ AH+GG AG LG +LL RP +
Sbjct: 162 LTIVAAGYMFYRSMGTGVNVEAHLGGLAAGFFLG-LLLCRPAW 203
>gi|398408343|ref|XP_003855637.1| hypothetical protein MYCGRDRAFT_68129 [Zymoseptoria tritici IPO323]
gi|339475521|gb|EGP90613.1| hypothetical protein MYCGRDRAFT_68129 [Zymoseptoria tritici IPO323]
Length = 496
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 5/171 (2%)
Query: 32 NSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEE 91
+ L G S ++GG + D + +RF ++LHA +IH+ N L L +G +E+
Sbjct: 219 SDLCGFSADKNPRVGGSLDDQPAPD-QWWRFIVPIFLHAGIIHIAFNLLLQLTLGRDVEK 277
Query: 92 DFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTL 151
G +R +LY +G G +L T S G SG+LFG+L +L +++ W
Sbjct: 278 LVGSIRFAILYFAAGIFGFVLG----GNFAATGIASTGCSGSLFGILAITLLDLLYTWKE 333
Query: 152 YTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
T+ + +++ + + A+G +PG+DN +HIGGF+ G++LG LL P
Sbjct: 334 RTSPVKDLMFILVDMVIAFALGLLPGLDNFSHIGGFLMGLVLGVCLLRSPS 384
>gi|71002610|ref|XP_755986.1| rhomboid family membrane protein [Aspergillus fumigatus Af293]
gi|66853624|gb|EAL93948.1| rhomboid family membrane protein [Aspergillus fumigatus Af293]
gi|159130040|gb|EDP55154.1| rhomboid family membrane protein [Aspergillus fumigatus A1163]
Length = 524
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 9/159 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LH +IH+ N L + + +E G+ R +Y+ SG G +L +
Sbjct: 256 QWFRFIIPMFLHTGIIHIGFNLLVQMTMAADMERTVGWWRFAFVYLASGIWGFVLGGNYA 315
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ + S G SG+LFG+L + +++ W ++ + +++L I ++ +G +PG
Sbjct: 316 AQGES----SCGCSGSLFGILALYILDLLYTWGERSSPWAELVIMVLGIAISFVLGLLPG 371
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYI 211
+DN +HIGGF+ G+ G ++ LR + G PY+
Sbjct: 372 LDNFSHIGGFIMGLASGLCIMRSPNALRERIGLARNPYV 410
>gi|335284752|ref|XP_003124711.2| PREDICTED: inactive rhomboid protein 1-like [Sus scrofa]
Length = 855
Score = 83.2 bits (204), Expect = 8e-14, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GFV+G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFVSGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>gi|226437617|ref|NP_034247.2| inactive rhomboid protein 1 [Mus musculus]
gi|190360227|sp|Q6PIX5.2|RHDF1_MOUSE RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Epidermal growth factor receptor-related protein;
AltName: Full=Rhomboid family member 1
Length = 856
Score = 83.2 bits (204), Expect = 8e-14, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GFV+G+ L F L PYI+ G K+ ++K +I
Sbjct: 768 IDNFAHISGFVSGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 809
Query: 238 VLF 240
V+F
Sbjct: 810 VVF 812
>gi|359414482|ref|ZP_09206947.1| Rhomboid family protein [Clostridium sp. DL-VIII]
gi|357173366|gb|EHJ01541.1| Rhomboid family protein [Clostridium sp. DL-VIII]
Length = 332
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 94/164 (57%), Gaps = 16/164 (9%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N+++ GEI+R +C +LH+ +IH++ N ++ IG ++E+ +G + ++Y
Sbjct: 177 GAKINILIDHGEIWRLLTCAFLHSGLIHIVCNMYSLYIIGPQIEQIYGIRKYLIIY---- 232
Query: 107 FGGGLLSCLHQDESQQTLQ---ISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLI 163
L+SC+ S L I++GASG +FGL+GA L+ + K +S L+
Sbjct: 233 ----LISCITASISSYFLNPNGIAIGASGGIFGLMGALLAFALIERNRIQKKFLS--SLL 286
Query: 164 LVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFI--LLLRPQYG 204
+I +N+ IG + IDN AHIGG V GI+ G+I +L+R ++
Sbjct: 287 QIIAINLFIGLSIKNIDNFAHIGGLVGGIVSGYISYILVRKRHN 330
>gi|291190666|ref|NP_001167164.1| Rhomboid-like protease 4 [Salmo salar]
gi|223648418|gb|ACN10967.1| Rhomboid-like protease 4 [Salmo salar]
Length = 788
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 76/141 (53%), Gaps = 5/141 (3%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + L + I LE+ G+LRI ++Y++SG G L S +
Sbjct: 585 QFYRLWLSLFLHAGILHCLVSVLFQMTILRDLEKLAGWLRISIIYIVSGITGNLASAIFL 644
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + T L+ V+ + G +P
Sbjct: 645 -----PYRAEVGPAGSQFGILACLFVELFQSWQILERPWRAFTKLLCVVLFLFSFGLLPW 699
Query: 178 IDNMAHIGGFVAGILLGFILL 198
IDN AHI GF++G+ L F L
Sbjct: 700 IDNFAHISGFISGLFLSFAFL 720
>gi|344291132|ref|XP_003417290.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Loxodonta
africana]
Length = 827
Score = 83.2 bits (204), Expect = 8e-14, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+I +W L + L ++ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELIQSWQLLERPWKAFLNLSAIVFFLFICGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 739 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 772
>gi|344291130|ref|XP_003417289.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Loxodonta
africana]
Length = 860
Score = 83.2 bits (204), Expect = 8e-14, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 657 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 716
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+I +W L + L ++ G +P
Sbjct: 717 -----PYRAEVGPAGSQFGLLACLFVELIQSWQLLERPWKAFLNLSAIVFFLFICGLLPW 771
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 772 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 805
>gi|403331813|gb|EJY64875.1| hypothetical protein OXYTRI_14975 [Oxytricha trifallax]
Length = 319
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 82/140 (58%), Gaps = 6/140 (4%)
Query: 28 PRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGV 87
P ++ GPS TL + G + + YD +++RFF+ ++LHA +H+ +N L+ + IG
Sbjct: 100 PLDNDNFLGPSVITLNQFGSNNPFRMRYDIQLWRFFTPIFLHAGFMHIFSNMLSQMIIGF 159
Query: 88 KLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIIT 147
LE G R+GLLY++SG GG L S L + ++SVGAS ++FGLL LS ++
Sbjct: 160 MLESIMGPFRVGLLYLVSGIGGNLFSALCAPD-----KLSVGASTSIFGLLACLLSLVLV 214
Query: 148 NW-TLYTNKCVSITMLILVI 166
NW L + V ++I VI
Sbjct: 215 NWKALDRSPEVRCCLIIFVI 234
>gi|348521001|ref|XP_003448015.1| PREDICTED: inactive rhomboid protein 2-like [Oreochromis niloticus]
Length = 830
Score = 83.2 bits (204), Expect = 9e-14, Method: Composition-based stats.
Identities = 55/185 (29%), Positives = 89/185 (48%), Gaps = 15/185 (8%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
++YR + ++LHA ++H + + + + I LE+ G+LRI ++Y+LSG G L S L
Sbjct: 623 QVYRLWLSLFLHAGLLHCVVSVVFQMTILRDLEKLAGWLRISIIYMLSGITGNLASALFL 682
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ W + + + L ++ G +P
Sbjct: 683 -----PYRAEVGPAGSQFGLLACLFVELFQGWQMLEKPWNAFSKLSCIVLFLFLCGLLPW 737
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN+AHI GF++G+LL F L PY+ G ++K L +V
Sbjct: 738 IDNIAHIFGFLSGLLLSFAFL----------PYVTFGTFDKYRKRILIAVSLLAYVGLFA 787
Query: 238 VLFVW 242
L VW
Sbjct: 788 SLIVW 792
>gi|326202014|ref|ZP_08191884.1| Rhomboid family protein [Clostridium papyrosolvens DSM 2782]
gi|325987809|gb|EGD48635.1| Rhomboid family protein [Clostridium papyrosolvens DSM 2782]
Length = 519
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 85/152 (55%), Gaps = 10/152 (6%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L+ G NL++ +G+ +RFF+ M+LHA+++HL N +I IG ++E+ FG R +
Sbjct: 214 LEPFGAKVNNLIM-EGQYWRFFTPMFLHADIVHLAVNCYSIYIIGAQVEKIFGRGRFLAI 272
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y ++G G S +L SVGASGA+FGL+GA L + L K
Sbjct: 273 YFVAGLIGSAASFAF------SLNSSVGASGAIFGLVGAMLYFSLRRPALL--KSSYGVN 324
Query: 162 LILVIGVNMAIGFM-PGIDNMAHIGGFVAGIL 192
LI +I +N+A G M IDN AHIGG V G L
Sbjct: 325 LITMIVINLAYGVMNKRIDNHAHIGGLVGGFL 356
>gi|296816012|ref|XP_002848343.1| DHHC zinc finger membrane protein [Arthroderma otae CBS 113480]
gi|238841368|gb|EEQ31030.1| DHHC zinc finger membrane protein [Arthroderma otae CBS 113480]
Length = 488
Score = 83.2 bits (204), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LHA ++H+ N A L IG +E G+ R ++Y SG G +L
Sbjct: 248 QWFRFILPMFLHAGLVHIGFNLFAQLSIGADMERAIGWWRYAIVYFSSGIFGFVLG---- 303
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG LFG+ + ++ W V + +++ + ++ +G +PG
Sbjct: 304 GNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLMFMLITVAISFVLGLLPG 363
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF+ G++LG +L P
Sbjct: 364 LDNFSHIGGFLTGLVLGICVLRSPD 388
>gi|20071092|gb|AAH27346.1| Rhomboid family 1 (Drosophila) [Mus musculus]
Length = 856
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GFV+G+ L F L PYI+ G K+ ++K +I
Sbjct: 768 IDNFAHISGFVSGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 809
Query: 238 VLF 240
V+F
Sbjct: 810 VVF 812
>gi|148691816|gb|EDL23763.1| rhomboid family 1 (Drosophila) [Mus musculus]
Length = 856
Score = 83.2 bits (204), Expect = 1e-13, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GFV+G+ L F L PYI+ G K+ ++K +I
Sbjct: 768 IDNFAHISGFVSGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 809
Query: 238 VLF 240
V+F
Sbjct: 810 VVF 812
>gi|326929278|ref|XP_003210794.1| PREDICTED: rhomboid family member 1-like [Meleagris gallopavo]
Length = 769
Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + I LE+ G+ RI ++Y+LSG G L S +
Sbjct: 566 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 625
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 626 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPW 680
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G L F L PYI+ G K+ ++K +I
Sbjct: 681 IDNFAHISGFISGFFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 722
Query: 238 VLFV 241
++F+
Sbjct: 723 LIFI 726
>gi|224069971|ref|XP_002196233.1| PREDICTED: inactive rhomboid protein 1 [Taeniopygia guttata]
Length = 857
Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + I LE+ G+ RI ++Y+LSG G L S +
Sbjct: 654 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 713
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 714 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPW 768
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G L F L PYI+ G K+ ++K +I
Sbjct: 769 IDNFAHISGFISGFFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 810
Query: 238 VLFV 241
++F+
Sbjct: 811 LIFI 814
>gi|118098129|ref|XP_414944.2| PREDICTED: inactive rhomboid protein 1 [Gallus gallus]
Length = 853
Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/184 (28%), Positives = 88/184 (47%), Gaps = 23/184 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + I LE+ G+ RI ++Y+LSG G L S +
Sbjct: 650 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 709
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 710 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPW 764
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G L F L PYI+ G K+ ++K +I
Sbjct: 765 IDNFAHISGFISGFFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 806
Query: 238 VLFV 241
++F+
Sbjct: 807 LIFI 810
>gi|167526511|ref|XP_001747589.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774035|gb|EDQ87669.1| predicted protein [Monosiga brevicollis MX1]
Length = 883
Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 18/190 (9%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
+LFG T+ + RNL + +RF + ++ HA+V H + +A + G K+E
Sbjct: 661 TLFGTGTSIDARKD--FRNLPDNPSQWWRFITPLFFHASVAHAILVLIAQYYYGRKMETH 718
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
G +R L+Y +SG GG ++ + L +SVG + +++G+L L ++ +W L
Sbjct: 719 IGAMRSLLIYFISGIGGTCIAAVFS-----PLDVSVGTNPSVYGILAVHLVDLFQSWQLV 773
Query: 153 TNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIA 212
+S+ L VI V + +G +DN +HIGGF G++ G I + PYI
Sbjct: 774 DRPGLSLAGLGGVIAVLLLVGTTSYVDNWSHIGGFAFGLVSGIIFI----------PYIT 823
Query: 213 PG-YELNHKK 221
G ++L K+
Sbjct: 824 FGKWDLARKR 833
>gi|449669475|ref|XP_002160443.2| PREDICTED: inactive rhomboid protein 1-like [Hydra magnipapillata]
Length = 733
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 93/185 (50%), Gaps = 22/185 (11%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
+IYR + ++LHA ++HL+ + I +E G+LR L+Y+LSG GG L S +
Sbjct: 523 DQIYRLWLSLFLHAGILHLVIVLIFNFTILQDIELMAGWLRTALIYLLSGIGGSLWSSIL 582
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP 176
S + VG SG+ FG++ E I +W LY + L ++ V IG +P
Sbjct: 583 LPYSPE-----VGPSGSCFGIIACLFVEYIQSWQLYKTPWIGFFKLCGLVLVLFLIGLLP 637
Query: 177 GIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISV 236
IDN AHI GFV G LL I L PYI G + + ++ K Q +++
Sbjct: 638 YIDNFAHIFGFVYGFLLSIIFL----------PYITFG-DWDRRRKKIQI------AVAI 680
Query: 237 VVLFV 241
V+LF+
Sbjct: 681 VILFI 685
>gi|420172602|ref|ZP_14679101.1| rhomboid family protein [Staphylococcus epidermidis NIHLM067]
gi|394241763|gb|EJD87172.1| rhomboid family protein [Staphylococcus epidermidis NIHLM067]
Length = 486
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 91/159 (57%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTTTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LV+ + ++ FM I+ MAH+GGF+ G+L+ I
Sbjct: 295 GQLLIALVVLIVFSL-FMSNINIMAHLGGFIIGVLITLI 332
>gi|71795631|ref|NP_001025205.1| inactive rhomboid protein 1 [Rattus norvegicus]
gi|123781648|sp|Q499S9.1|RHDF1_RAT RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|71121786|gb|AAH99777.1| Rhomboid 5 homolog 1 (Drosophila) [Rattus norvegicus]
gi|149052201|gb|EDM04018.1| rhomboid family 1 (Drosophila) [Rattus norvegicus]
Length = 856
Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AHI GFV+G+ L F L PYI+ G ++L K+
Sbjct: 768 IDNFAHISGFVSGLFLSFAFL----------PYISFGKFDLYRKR 802
>gi|408530693|emb|CCK28867.1| integral membrane protein [Streptomyces davawensis JCM 4913]
Length = 296
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 87/163 (53%), Gaps = 20/163 (12%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +G+ YR + M+LH +VIHLL N L++ ++G LE G R LY +SG G L+
Sbjct: 127 VAEGQSYRLLTSMFLHGSVIHLLFNMLSLWWLGGPLEAALGRARYLALYFVSGLAGSALA 186
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L + + TL GASGA+FGL GA+ L + +I ++ +N+
Sbjct: 187 YLLAEPNTATL----GASGAIFGLFGATA-------VLMRRLNYDMRPIIALLAINLIFT 235
Query: 174 FMPG--IDNMAHIGGFVAGILLGFILLLRP-------QYGYVS 207
F PG I AHIGG VAG+++G+ ++ P QYG V+
Sbjct: 236 FSPGFNISWQAHIGGLVAGVVIGYGMVHAPRERRALIQYGTVA 278
>gi|335297303|ref|XP_003131221.2| PREDICTED: inactive rhomboid protein 2-like [Sus scrofa]
Length = 827
Score = 82.8 bits (203), Expect = 1e-13, Method: Composition-based stats.
Identities = 53/164 (32%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI +++VLSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFVLSGITGNLASAIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L V+ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAVVLFLFVCGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 739 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 772
>gi|399217023|emb|CCF73710.1| unnamed protein product [Babesia microti strain RI]
Length = 949
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 81/167 (48%), Gaps = 5/167 (2%)
Query: 29 RSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVK 88
+S P+ + LGGL+ N + E YR M+LH +VIH++ N +
Sbjct: 173 KSSGRFDSPNARIFETLGGLNSNKIRNYKEYYRLVWSMFLHGSVIHMVFNLCCQIQSLWM 232
Query: 89 LEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITN 148
+E D+GF R LY +SG G LLS + +VG+SGA++GL+GA + I
Sbjct: 233 IEPDWGFFRTAGLYFVSGIFGNLLSAI-----LDPCGTTVGSSGAMYGLMGALIPYCIEY 287
Query: 149 WTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
W + + I + + G DN AH+GG +AGIL GF
Sbjct: 288 WKTIPRPFSILIFNCIFIIIGLISGLAGYTDNYAHLGGCIAGILWGF 334
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 86/169 (50%), Gaps = 11/169 (6%)
Query: 29 RSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVK 88
+S P+ + LGGL+ N + E YR M+LH +VIH++ N +
Sbjct: 658 KSSGRFDSPNARIFETLGGLNSNKIRNYKEYYRLVWSMFLHGSVIHMVFNLCCQIQSLWM 717
Query: 89 LEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITN 148
+E D+GF R LY +SG G LLS + +VG+SGA++GL+GA + I
Sbjct: 718 IEPDWGFFRTAGLYFVSGIFGNLLSAI-----LDPCGTTVGSSGAMYGLMGALIPYCIVR 772
Query: 149 WTLYTNKCVSITMLIL--VIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
+ N C S ++L ++ N+ I + I + +GGF+AG+L GF
Sbjct: 773 --ILENDCASKVYIVLCDIVCGNLLIDVVIWI--VDWVGGFIAGVLWGF 817
>gi|418695529|ref|ZP_13256548.1| peptidase, S54 family [Leptospira kirschneri str. H1]
gi|409956614|gb|EKO15536.1| peptidase, S54 family [Leptospira kirschneri str. H1]
Length = 514
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 89/171 (52%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA+ HL N ++ + +E
Sbjct: 350 FFYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHASFPHLFFNGFGLIISAIFVEPIL 408
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ + L
Sbjct: 409 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFLRD 463
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN +HIGG V G +LG IL Q+G
Sbjct: 464 DKKNVLIMIVTFILTGLLWGLFGGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|291561790|emb|CBL40590.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[butyrate-producing bacterium SS3/4]
Length = 206
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 84/150 (56%), Gaps = 5/150 (3%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
V+ DGE YR + M++H + H++ N L + IG LE G ++ + Y+L G G +
Sbjct: 49 VLEDGEYYRLLTAMFMHFGIRHIMNNMLVLFVIGDNLERALGHVKYLIFYLLCGIGSNWV 108
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAI 172
S + + T+ +S GASGA+FG++G L + N + ++ L+++I ++ +
Sbjct: 109 SMMAH--TADTMTVSAGASGAIFGVVGGLLYVVTANRGQLED--LNTRQLVIMIFFSLYL 164
Query: 173 GFMP-GIDNMAHIGGFVAGILLGFILLLRP 201
G+ G+DN+AH+ G V G +L IL RP
Sbjct: 165 GYTSTGVDNIAHLSGLVIGFVLAIILYHRP 194
>gi|403280496|ref|XP_003931753.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 857
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 654 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 713
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ A G +P
Sbjct: 714 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLPW 768
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 769 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 802
>gi|403280494|ref|XP_003931752.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 828
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 625 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 684
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ A G +P
Sbjct: 685 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLPW 739
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 740 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 773
>gi|358061502|ref|ZP_09148156.1| hypothetical protein HMPREF9473_00218 [Clostridium hathewayi
WAL-18680]
gi|356700261|gb|EHI61767.1| hypothetical protein HMPREF9473_00218 [Clostridium hathewayi
WAL-18680]
Length = 206
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 94/174 (54%), Gaps = 10/174 (5%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
SENSLF + + G + LV +GE YR + +++H + H++ N L + +G +
Sbjct: 33 SENSLF------MIQHGAMYEPLVTENGEYYRLLTSIFMHFGINHIVNNMLMLFILGDNM 86
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E G ++ Y++ G G + S + + + L +S GASGA+FG++G L + N
Sbjct: 87 ERALGHIKYLFFYLICGVGANIAS-MTVNVMNKELVVSAGASGAIFGVIGGLLYAVAVNH 145
Query: 150 TLYTNKCVSITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRPQ 202
+ +S L++VI ++ GF G+DN+AHI G + GI++ +L +P+
Sbjct: 146 GRLED--LSTRQLVVVILCSLYFGFTSGGVDNVAHIAGLLIGIVMAMLLYRKPK 197
>gi|296203262|ref|XP_002748805.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Callithrix
jacchus]
Length = 857
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 654 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 713
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ A G +P
Sbjct: 714 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLPW 768
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 769 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 802
>gi|296203260|ref|XP_002748804.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Callithrix
jacchus]
Length = 828
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 625 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 684
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ A G +P
Sbjct: 685 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLPW 739
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 740 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 773
>gi|420216660|ref|ZP_14721861.1| rhomboid family protein, partial [Staphylococcus epidermidis
NIH05001]
gi|394291537|gb|EJE35341.1| rhomboid family protein, partial [Staphylococcus epidermidis
NIH05001]
Length = 326
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 22 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 80
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 81 MLIIYIISGLYGNFVSL-----SFNTTTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 134
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I
Sbjct: 135 GQLLIALVVLIVFSL-FMSNINIMAHLGGFISGVLITLI 172
>gi|302384591|ref|YP_003820413.1| rhomboid family protein [Clostridium saccharolyticum WM1]
gi|302195219|gb|ADL02790.1| Rhomboid family protein [Clostridium saccharolyticum WM1]
Length = 206
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 89/158 (56%), Gaps = 4/158 (2%)
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
G + LV+ +GE +R + +++H + H++ N L + +G LE G ++ L Y+L
Sbjct: 43 GAMYAPLVLEEGEYFRLLTSVFMHFGINHIMNNMLILFILGDNLERALGHIKYLLFYLLC 102
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G G ++S + +++ +S GASGA+FG++G L + N + +S LI++
Sbjct: 103 GVGANVISIILNLGDYRSV-VSAGASGAIFGVIGGLLYAVFINRGRLED--LSARQLIIM 159
Query: 166 IGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRPQ 202
I ++ GF G+DN AHIGG GI+LG +L +P+
Sbjct: 160 IACSLYFGFTSTGVDNAAHIGGLFFGIVLGILLYRKPR 197
>gi|354499596|ref|XP_003511894.1| PREDICTED: inactive rhomboid protein 1-like [Cricetulus griseus]
gi|344254275|gb|EGW10379.1| Rhomboid family member 1 [Cricetulus griseus]
Length = 856
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AHI GF++G+ L F L PYI+ G ++L K+
Sbjct: 768 IDNFAHISGFISGLFLSFAFL----------PYISFGKFDLYRKR 802
>gi|418605748|ref|ZP_13169055.1| peptidase, S54 family [Staphylococcus epidermidis VCU041]
gi|420220495|ref|ZP_14725454.1| rhomboid family protein [Staphylococcus epidermidis NIH04008]
gi|420232065|ref|ZP_14736707.1| peptidase, S54 family [Staphylococcus epidermidis NIH051668]
gi|374401451|gb|EHQ72524.1| peptidase, S54 family [Staphylococcus epidermidis VCU041]
gi|394285848|gb|EJE29914.1| rhomboid family protein [Staphylococcus epidermidis NIH04008]
gi|394301787|gb|EJE45241.1| peptidase, S54 family [Staphylococcus epidermidis NIH051668]
Length = 486
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 91/159 (57%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASG +FGL+G S+ I+ + K +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTTTISVGASGTIFGLIG-SIFVIMYLSKNFNKKMI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I
Sbjct: 295 GQLLIALVVLIVFSL-FMSNINIMAHLGGFISGVLITLI 332
>gi|344292280|ref|XP_003417856.1| PREDICTED: inactive rhomboid protein 1-like [Loxodonta africana]
Length = 856
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + I LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + + L+ V+ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILASPWRAFFKLLAVVLFLFTFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AHI GFV+G+ L F L PYI+ G ++L K+
Sbjct: 768 IDNFAHISGFVSGLFLSFAFL----------PYISFGKFDLYRKR 802
>gi|123446916|ref|XP_001312204.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121894043|gb|EAX99274.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 366
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST+ + K G +S + YD + +R F+ M+LH + IH+L NSL + E+ +
Sbjct: 170 MLEPSTSIVIKYGAMSTQKIRYDYQFWRLFTYMFLHGSWIHILFNSLGQFMFCLGCEKSW 229
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G++R +Y LSG GGL+S + QISVGAS +FG++GA + I+ W+
Sbjct: 230 GYVRYIAIYFLSGILGGLVSAMKSAN-----QISVGASAGIFGIMGAYAALILLLWSQLQ 284
Query: 154 N--KCVSITMLILVIGVNMAIGFMPGID 179
K T LI++ + + + F+P +D
Sbjct: 285 GMAKIQLTTFLIMLPIMFICVSFLPHVD 312
>gi|373471259|ref|ZP_09562320.1| peptidase, S54 family [Lachnospiraceae bacterium oral taxon 082
str. F0431]
gi|371760666|gb|EHO49340.1| peptidase, S54 family [Lachnospiraceae bacterium oral taxon 082
str. F0431]
Length = 210
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 88/145 (60%), Gaps = 10/145 (6%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
GE YR + M++H + H+ N L ++ +G KLE+ G + ++Y+LS G+L+ L
Sbjct: 53 GEYYRLITSMFMHFGIEHIANNMLILVLLGGKLEDIMGHFKFFIIYMLS----GILANLA 108
Query: 117 QDESQQ---TLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
D +Q +S GASGA+FG++GA L+ ++ + N +S+ +++ +G+ + G
Sbjct: 109 SDWAQTMTGDFAVSAGASGAIFGVVGALLASLVLSKGKIKN--LSLYQIVVSLGLMLYAG 166
Query: 174 F-MPGIDNMAHIGGFVAGILLGFIL 197
F G+DN+AH+GG V+G+ +G IL
Sbjct: 167 FKTTGVDNIAHVGGAVSGVFIGLIL 191
>gi|348585385|ref|XP_003478452.1| PREDICTED: inactive rhomboid protein 1-like [Cavia porcellus]
Length = 856
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 54/186 (29%), Positives = 92/186 (49%), Gaps = 18/186 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKKPKYQCHQKLL--WVI 234
IDN AHI GF++G+ L F L PYI+ G ++L K+ + Q + +
Sbjct: 768 IDNFAHISGFISGLFLSFAFL----------PYISFGKFDLYRKRCQIIIFQAVFLGLLA 817
Query: 235 SVVVLF 240
+V+LF
Sbjct: 818 GLVILF 823
>gi|426238434|ref|XP_004013158.1| PREDICTED: inactive rhomboid protein 2 [Ovis aries]
Length = 825
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 55/182 (30%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S L
Sbjct: 622 QFYRLWLSLFLHAGVVHCLVSVIFQMTILRDLEKLAGWHRISIIFILSGITGNLASALFL 681
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W L + L ++ G +P
Sbjct: 682 -----PYRAEVGPAGSQFGILACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPW 736
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN+AHI GF++G+LL F L PYI G ++K + L ++S+V
Sbjct: 737 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK-------RALILVSLV 779
Query: 238 VL 239
V
Sbjct: 780 VF 781
>gi|449551010|gb|EMD41974.1| hypothetical protein CERSUDRAFT_79578 [Ceriporiopsis subvermispora
B]
Length = 460
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF + ++LHA +IH L N LA L ++E + G + +LY+ SG G +L
Sbjct: 255 FRFITPIFLHAGIIHYLLNMLAQLTATAQVEREMGSISFLILYMASGIFGNVLG----GN 310
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
SVGASGA+FG + + ++ +W + +++ + + +A+GF+P +D
Sbjct: 311 FSLVGSPSVGASGAIFGTVAVAWVDLFAHWRYIYQPGRKLVYMLIELVIGIAVGFIPYVD 370
Query: 180 NMAHIGGFVAGILLGFIL 197
N AHIGG V G+L+G +L
Sbjct: 371 NFAHIGGLVMGLLVGMLL 388
>gi|340904956|gb|EGS17324.1| hypothetical protein CTHT_0066450 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 496
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 4/160 (2%)
Query: 43 KKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLY 102
K G S + + +RF +++HA VIH+ N L L +G +E G +R L+Y
Sbjct: 252 KYAPGASMDDKPEPNQWFRFIIPIFMHAGVIHIGFNLLLQLTLGRDMERSIGSIRFFLVY 311
Query: 103 VLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITML 162
+ SG G ++ T S GASG+LFG++ +L ++ +W N ++ +
Sbjct: 312 MCSGIFGFVMG----GNFAATGIASTGASGSLFGIIALTLLDLFYSWKDRMNPVKDLSYI 367
Query: 163 ILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+L + ++ +G +PG+DN +HIGGF+ G+ LG +L P
Sbjct: 368 LLNVIISFVLGLLPGLDNFSHIGGFLMGLALGICVLHSPN 407
>gi|156085260|ref|XP_001610112.1| rhomboid 4 [Babesia bovis]
gi|154797364|gb|EDO06544.1| rhomboid 4 [Babesia bovis]
Length = 641
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 36 GPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGF 95
GP+ +G +S N V E +R S ++LHA HL TN L + + +E D+GF
Sbjct: 309 GPNVRIASIIGAVSANEVRLYNEKFRILSAIFLHAGFTHLFTNCLMNMLLLYVIEPDWGF 368
Query: 96 LRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK 155
R LLY+++G GG L+ S GASG+LFGL GA + I +W +
Sbjct: 369 KRTSLLYLVAGIGGNLVHT-----SMSPCIPCWGASGSLFGLYGAFIPYTIEHWDNLRSP 423
Query: 156 CVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
+ + + + + + F+ G+ AH+GGF G+ GF L
Sbjct: 424 LLLLLISVAFVSIEF-FSFVRGVSKHAHLGGFAFGLCFGFATL 465
>gi|255282943|ref|ZP_05347498.1| putative small hydrophobic molecule transporter protein [Bryantella
formatexigens DSM 14469]
gi|255266482|gb|EET59687.1| peptidase, S54 family [Marvinbryantia formatexigens DSM 14469]
Length = 205
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 83/146 (56%), Gaps = 6/146 (4%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
V GE YR F+CM+LH HL N L + F G LEE G +R ++Y+ G G +L
Sbjct: 54 VTQKGEYYRLFTCMFLHFGWQHLFYNMLLLWFAGDMLEERSGPVRYLVIYLAGGVAGNVL 113
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAI 172
S L E Q +S GASGA+F ++GA + ++ N + + L ++ +++A
Sbjct: 114 SFLTGMERQ---VVSAGASGAVFAVIGALVWLVVKNRG--KVEGIDNRGLCMMAVLSLAQ 168
Query: 173 GFM-PGIDNMAHIGGFVAGILLGFIL 197
GFM G+D+MAH+GGF+ G LL +L
Sbjct: 169 GFMDAGVDHMAHLGGFIGGFLLAAVL 194
>gi|418325502|ref|ZP_12936708.1| peptidase, S54 family [Staphylococcus epidermidis VCU071]
gi|365228104|gb|EHM69289.1| peptidase, S54 family [Staphylococcus epidermidis VCU071]
Length = 486
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G+ +I + NK +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTTTISVGASGAIFGLIGSIF--VIMYLSKNFNKKM 293
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+LI + + + FM I+ MAH+GGF++G+L+ I
Sbjct: 294 IGQLLIALFVLIVFSLFMSNINIMAHLGGFISGVLITLI 332
>gi|449275966|gb|EMC84691.1| Rhomboid family member 1 [Columba livia]
Length = 774
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + I LE+ G+ RI ++Y+LSG G L S +
Sbjct: 571 QFYRLWLSLFLHAGILHCLVSICFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 630
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 631 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPW 685
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AHI GF++G L F L PYI+ G ++L K+
Sbjct: 686 IDNFAHISGFISGFFLSFAFL----------PYISFGKFDLYRKR 720
>gi|420184523|ref|ZP_14690632.1| rhomboid family protein [Staphylococcus epidermidis NIHLM040]
gi|394257174|gb|EJE02096.1| rhomboid family protein [Staphylococcus epidermidis NIHLM040]
Length = 486
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G+ +I + NK +
Sbjct: 241 MLIIYIISGLYGNFVSL-----SFNTTTISVGASGAIFGLIGSIF--VIMYLSKNFNKKM 293
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+LI + + + FM I+ MAH+GGF++G+L+ I
Sbjct: 294 IGQLLIALFVLIVFSLFMSNINIMAHLGGFISGVLITLI 332
>gi|194466614|ref|ZP_03072601.1| Rhomboid family protein [Lactobacillus reuteri 100-23]
gi|194453650|gb|EDX42547.1| Rhomboid family protein [Lactobacillus reuteri 100-23]
Length = 219
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/161 (36%), Positives = 91/161 (56%), Gaps = 8/161 (4%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+T L K+G S +L+ +GE +R S ++LH + HL+ NS+ +L+IG +EE FG R
Sbjct: 34 NTVILLKMGARSTSLI-REGEWWRLVSPVFLHVGLSHLVVNSVTLLYIGRYIEEFFGHWR 92
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y +S G L S + L IS GAS A+FGL GA L + + +
Sbjct: 93 MVVIYFISAIFGNLASAVFMP-----LTISAGASTAIFGLFGAFLMLGVCFHRNIVVRVL 147
Query: 158 SITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
S T L+ VI +N+ + F+PG+D + HIGG G + FI+
Sbjct: 148 SRTFLLFVI-INIVMDFFLPGVDLVGHIGGLFGGFFIAFIV 187
>gi|301769045|ref|XP_002919912.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid family member 2-like
[Ailuropoda melanoleuca]
Length = 823
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI +++VLSG G L S +
Sbjct: 620 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFVLSGITGNLASAIFL 679
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 680 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPW 734
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 735 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 768
>gi|342321566|gb|EGU13499.1| Hypothetical Protein RTG_00227 [Rhodotorula glutinis ATCC 204091]
Length = 690
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 79/141 (56%), Gaps = 4/141 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RFF ++LHA V+HLL N LA ++E G R ++Y+ +G G +L
Sbjct: 463 QSFRFFVPIFLHAGVVHLLLNMLAQCTSSAQVERMMGTPRFLIVYLAAGIFGFVLGA--- 519
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
Q SVGASGA+FG A L +++ +W + + L++ I + + +G++PG
Sbjct: 520 -NFALVGQPSVGASGAIFGTHAALLVDLLAHWKIEYRPLRKLLFLVVEIIIGLGLGWVPG 578
Query: 178 IDNMAHIGGFVAGILLGFILL 198
+DN AH+GGF+ G+L +L
Sbjct: 579 VDNFAHLGGFLMGLLTSVLLF 599
>gi|190195531|gb|ACE73629.1| rhomboid family 1 (predicted) [Sorex araneus]
Length = 868
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 665 QFYRLWLSLFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 724
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 725 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 779
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 780 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 821
Query: 238 VLF 240
V+F
Sbjct: 822 VVF 824
>gi|149239566|ref|XP_001525659.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451152|gb|EDK45408.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 797
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 41 TLKKLGGLSRNLVVYDG------EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
+L L GLS DG + YR F ++LHA +H+ N L L +G +E + G
Sbjct: 386 SLNDLCGLSGIPTFDDGTKFAPNQWYRIFIPIFLHAGFLHIFFNLLLQLTMGASIERNIG 445
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII----TNWT 150
L+ L+Y++SG G LL + + Q + S GASGALFG++ ++ I N
Sbjct: 446 ILKYALIYIMSGIAGFLLGA---NFTPQGI-ASTGASGALFGVVATNIILFIYTGRKNTN 501
Query: 151 LYTNKCVSITMLILV--IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+Y K + + + I ++ +G +PG+DN +H+GGF GIL +LL P + Y G
Sbjct: 502 MYGTKHYKLFIFFMFCEIVISFVLGLLPGLDNFSHLGGFAMGILSAILLLKDPFWIYNDG 561
>gi|301623881|ref|XP_002941242.1| PREDICTED: rhomboid family member 1-like [Xenopus (Silurana)
tropicalis]
Length = 855
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 53/186 (28%), Positives = 87/186 (46%), Gaps = 23/186 (12%)
Query: 55 YDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
+ ++YR + ++LHA V+H L + + I LE+ G+ RI ++Y+LSG G L S
Sbjct: 649 FPDQVYRLWLSLFLHAGVLHCLVSVCFQMTILRDLEKLAGWHRISIIYILSGITGNLTSA 708
Query: 115 LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF 174
+ + VG +G+ FG+L E+ +W + + L V+ G
Sbjct: 709 IFL-----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLFAVVIFLFTFGL 763
Query: 175 MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVI 234
+P IDN AH GFV+G L F L PYI+ G K+ ++K +I
Sbjct: 764 LPWIDNFAHFAGFVSGFFLSFAFL----------PYISFG--------KFDMYRKRCQII 805
Query: 235 SVVVLF 240
+++F
Sbjct: 806 IFLLIF 811
>gi|428183558|gb|EKX52415.1| hypothetical protein GUITHDRAFT_161181 [Guillardia theta CCMP2712]
Length = 352
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 89/168 (52%), Gaps = 8/168 (4%)
Query: 29 RSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVK 88
S +++ + L +GG L+ GE +R + + LHA + HLL N+ G++
Sbjct: 141 NSWSAILDVPSPVLAVMGGKVAPLIA-AGEYWRLITPIMLHAGLFHLLINAFTQCMFGIQ 199
Query: 89 LEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITN 148
LE ++G +I ++YV +G G +LS L ++ +S+G SGA+FGL GA ++ I
Sbjct: 200 LEREWGAAQIAIIYVCAGIYGNILSVLFAPQA-----LSIGCSGAIFGLFGAQVAYITGM 254
Query: 149 WTLYTN--KCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLG 194
W + K + I L L F G+D AH+GGFVAG+++G
Sbjct: 255 WRQLGDLQKKMLILSLSLSFIFIFVFSFSVGVDMSAHMGGFVAGMVMG 302
>gi|111278466|gb|ABH09088.1| putative membrane protein [Artemisia annua]
Length = 140
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 72/105 (68%), Gaps = 3/105 (2%)
Query: 137 LLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
LLGA LSE++TNWT+Y NK ++ L+++I VN+A+G +P +DN AHIGGF+ G LLGF+
Sbjct: 1 LLGAMLSELLTNWTIYANKAAALFTLLIIILVNLAVGMLPHVDNFAHIGGFLTGFLLGFV 60
Query: 197 LLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVLFV 241
LLLRPQ+ + + + KY +Q + W++S+++L V
Sbjct: 61 LLLRPQFAWQERHNLPVEAR---SRSKYTVYQYVFWLLSLILLVV 102
>gi|402572950|ref|YP_006622293.1| hypothetical protein Desmer_2505 [Desulfosporosinus meridiei DSM
13257]
gi|402254147|gb|AFQ44422.1| putative membrane protein [Desulfosporosinus meridiei DSM 13257]
Length = 314
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 84/152 (55%), Gaps = 9/152 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE++RF + +++H +HLL N A+ +G E +FG R ++Y++SG
Sbjct: 165 GAKVNPLIQAGELWRFLTSVFIHIGFLHLLFNLYALWSLGPISERNFGHWRFLVIYIMSG 224
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
GG + S + +S GASGA+FGLLGA L + +L+ K L++VI
Sbjct: 225 LGGSIASYFF------STALSAGASGAIFGLLGALLYYSLKRPSLW--KSGLGMNLVIVI 276
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGILLGFIL 197
+N G PGIDN AH+GG + G L +L
Sbjct: 277 IINFGFGLTQPGIDNYAHLGGLIIGFLTTMLL 308
>gi|156085262|ref|XP_001610113.1| rhomboid 4 [Babesia bovis]
gi|154797365|gb|EDO06545.1| rhomboid 4 [Babesia bovis]
Length = 629
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 6/163 (3%)
Query: 36 GPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGF 95
GP+ +G +S N V E +R S ++LHA HL TN L + + +E D+GF
Sbjct: 309 GPNVRIASIIGAVSANEVRLYNEKFRILSAIFLHAGFTHLFTNCLMNMLLLYVIEPDWGF 368
Query: 96 LRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK 155
R LLY+++G GG L+ S GASG+LFGL GA + I +W +
Sbjct: 369 KRTSLLYLVAGIGGNLVHT-----SMSPCIPCWGASGSLFGLYGAFIPYTIEHWDNLRSP 423
Query: 156 CVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
+ + + + + + F+ G+ AH+GGF G+ GF L
Sbjct: 424 LLLLLISVAFVSIEF-FSFVRGVSKHAHLGGFAFGLCFGFATL 465
>gi|15894241|ref|NP_347590.1| hypothetical protein CA_C0954 [Clostridium acetobutylicum ATCC 824]
gi|337736171|ref|YP_004635618.1| hypothetical protein SMB_G0971 [Clostridium acetobutylicum DSM
1731]
gi|384457680|ref|YP_005670100.1| hypothetical protein CEA_G0966 [Clostridium acetobutylicum EA 2018]
gi|15023857|gb|AAK78930.1|AE007610_10 Uncharacterized membrane protein [Clostridium acetobutylicum ATCC
824]
gi|325508369|gb|ADZ20005.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
gi|336291944|gb|AEI33078.1| hypothetical protein SMB_G0971 [Clostridium acetobutylicum DSM
1731]
Length = 328
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 14/155 (9%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G ++++ +G+ YR +CM+LHA + H+ N ++ +G LE +G LR +Y +SG
Sbjct: 177 GAKNSVLIDNGQYYRLITCMFLHAGITHIGANMYSLYSMGYMLENIYGKLRYTAIYFISG 236
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
S + ES +SVGASGA+FGLLGA+ I+ + L K + ++
Sbjct: 237 ITASFFSYIFSRES-----LSVGASGAIFGLLGAA---IVFGFKL--RKRIGKAFFANMV 286
Query: 167 GV---NMAIGF-MPGIDNMAHIGGFVAGILLGFIL 197
GV N+ I F +P ID AH GGF+ G+++ IL
Sbjct: 287 GVFALNIFISFTIPNIDIFAHFGGFLGGVVVSVIL 321
>gi|334131953|ref|ZP_08505715.1| Rhomboid-like protein [Methyloversatilis universalis FAM5]
gi|333443426|gb|EGK71391.1| Rhomboid-like protein [Methyloversatilis universalis FAM5]
Length = 383
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 90/158 (56%), Gaps = 20/158 (12%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL-EEDFGFLRIGLLYVLSGFGGGL 111
DG+ +R S M+LH ++HL N +A LF G +L E FG LR +YVLSG G L
Sbjct: 61 ATKDGQWWRLGSAMFLHFGLLHLGMN-MASLFDGGRLVERMFGPLRFLAIYVLSGLTGNL 119
Query: 112 LSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW-TLYTNKCVSI-------TMLI 163
LS + Q + +S GASGA+FG+ GA L+ + TL + V + +
Sbjct: 120 LSLIVQGDR----AVSGGASGAIFGVYGALLAFLWQQRDTLDRREFVRLFWGAGLFAAIT 175
Query: 164 LVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
+V+G+N +PGIDN AHIGGF++G+L G L+RP
Sbjct: 176 IVLGLN-----IPGIDNGAHIGGFISGLLAG-AALVRP 207
>gi|340502586|gb|EGR29263.1| rhomboid family protein, putative [Ichthyophthirius multifiliis]
Length = 305
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 93/187 (49%), Gaps = 21/187 (11%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L + G + + +++R F+ M+LH N IH+L NS++ + +E +G L + ++
Sbjct: 108 LDEFGANNAQKIQQKYQLWRLFTAMFLHLNFIHILFNSVSAFILVSVMEYTYGTLYVIII 167
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTL--YTNK---- 155
Y+LSG GG L + D + IS GAS +L G+L +S ++ NW +T +
Sbjct: 168 YILSGIGGNLFT----DMFSSVIIISAGASTSLMGMLALFVSYMVLNWKSLEFTGQLRCM 223
Query: 156 --CVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAP 213
C++ ++I V ++ G+DN H+GGF+ G+L G + P+
Sbjct: 224 FVCITTIIIIWVFLLSSGFSTKSGVDNFGHLGGFITGLLAGIC---------IPKPFQQT 274
Query: 214 GYELNHK 220
YE+ K
Sbjct: 275 DYEMKAK 281
>gi|331217798|ref|XP_003321577.1| hypothetical protein PGTG_03114 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300567|gb|EFP77158.1| hypothetical protein PGTG_03114 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 468
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 76/145 (52%), Gaps = 12/145 (8%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG-FG---GGLLS 113
+ +RF ++LHA +IH L N + +E G LR LLY+ SG FG GG S
Sbjct: 219 QKFRFVLPLFLHAGLIHYLLNIAVQMTSSALIERQMGSLRFILLYLPSGIFGFILGGNFS 278
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
+ Q SVGASGA+F A L ++I +W++ + L+ I + +G
Sbjct: 279 LVGQP--------SVGASGAIFSTYAAVLVDLIAHWSIEYRPTRKLVFLVFEIVAGLLLG 330
Query: 174 FMPGIDNMAHIGGFVAGILLGFILL 198
+PGIDN +HIGGF GILL +L
Sbjct: 331 LIPGIDNFSHIGGFSMGILLAILLF 355
>gi|325663211|ref|ZP_08151661.1| hypothetical protein HMPREF0490_02402 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325470665|gb|EGC73895.1| hypothetical protein HMPREF0490_02402 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 209
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 94/180 (52%), Gaps = 10/180 (5%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ +E+ +F + G + ++ +GE YR F+ M+LH HL+ N +
Sbjct: 25 SFQGMTEDGIF------MFHHGAMYVPSMLEEGEYYRLFTSMFLHFGFEHLMNNMFILGV 78
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
IG LE + G + +Y+LSG G LLS D IS GASGA+FG++GA
Sbjct: 79 IGWNLELEIGKWKYLAVYLLSGLMGNLLSAW-MDIQTGEYAISAGASGAIFGVIGALFYV 137
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQY 203
+ N N +S L ++ ++ +GF G+DN AHIGG ++GILL IL + +Y
Sbjct: 138 ALRNRGRIGN--ISSRGLAFMVLCSLYLGFTSKGVDNSAHIGGVISGILLAAILYHKKKY 195
>gi|346974557|gb|EGY18009.1| rhomboid family membrane protein [Verticillium dahliae VdLs.17]
Length = 567
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 81/145 (55%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF + ++LHA +IH+ N L + IG ++E G +R L+Y +G G ++ +
Sbjct: 313 QWFRFITPIFLHAGLIHIGVNMLLQMTIGKEMEMAIGPVRFFLVYFSAGIFGNVMGANYA 372
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
T + S GASGALFG++ + ++ +W + + ++L + + +G +PG
Sbjct: 373 G----TGEASTGASGALFGIIALTALDLAYSWKDRRHPVKDLMFVLLDVVICFVLGLLPG 428
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN AHIGGF+ G+ LG +L P
Sbjct: 429 LDNFAHIGGFLMGLCLGICVLHSPN 453
>gi|410981852|ref|XP_003997280.1| PREDICTED: inactive rhomboid protein 2 [Felis catus]
Length = 824
Score = 81.6 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H + + + I LE+ G+ RI ++++LSG G L S L
Sbjct: 621 QFYRLWLSLFLHAGVVHCFVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASALFL 680
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 681 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFVCGLLPW 735
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 736 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 769
>gi|418327645|ref|ZP_12938790.1| peptidase, S54 family [Staphylococcus epidermidis 14.1.R1.SE]
gi|365232769|gb|EHM73752.1| peptidase, S54 family [Staphylococcus epidermidis 14.1.R1.SE]
Length = 234
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 92/159 (57%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 57 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIIGSWR 115
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y++SG G +S S T ISVGASGA+FGL+G S+ I+ + K +
Sbjct: 116 MLIIYIISGLYGNFVSL-----SFNTSTISVGASGAIFGLIG-SIFVIMYLSKNFNKKMI 169
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LV+ + ++ FM I+ MAH+GGF++G+L+ I
Sbjct: 170 GQLLIALVVLIGFSL-FMSNINIMAHLGGFISGVLITLI 207
>gi|149723286|ref|XP_001493344.1| PREDICTED: inactive rhomboid protein 2-like [Equus caballus]
Length = 827
Score = 81.6 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 739 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 772
>gi|116829774|ref|NP_001070906.1| inactive rhomboid protein 2 [Canis lupus familiaris]
gi|122131675|sp|Q00M95.1|RHDF2_CANFA RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid family member 2; AltName: Full=Rhomboid
veinlet-like protein 6
gi|85717756|gb|ABC74872.1| rhomboid veinlet-like 6 isoform 1 [Canis lupus familiaris]
Length = 827
Score = 81.6 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 739 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 772
>gi|399889571|ref|ZP_10775448.1| hypothetical protein CarbS_13682 [Clostridium arbusti SL206]
Length = 323
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 9/156 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE YR F+CM+LH+ ++H+ +N ++ IG +E FG + ++Y+LSG
Sbjct: 172 GAKDNTLINSGEYYRLFTCMFLHSGIVHIASNMYSLYSIGGLVESIFGRKKYIIMYLLSG 231
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
L S + ISVGASGA+FG+LG L +I++ + +I VI
Sbjct: 232 LIASLFSYVFSS------GISVGASGAIFGVLGGVL--VISHKLKHRIGKGLFRNIIFVI 283
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRP 201
+N+ I F +P ID AH+GG ++GI++ + + +
Sbjct: 284 AINLFISFTIPNIDISAHLGGLISGIIISWFIFPKE 319
>gi|223994881|ref|XP_002287124.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976240|gb|EED94567.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 866
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 83/148 (56%), Gaps = 8/148 (5%)
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
G +L++ +++R + ++LH + HL+ NS ++ +G+ +E FG R Y+LS
Sbjct: 559 GAKRSDLLLEGRQLHRLITPIFLHGGIGHLMANSYSLKSMGMNIERSFGRSRFVATYLLS 618
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT-NKCVSITMLIL 164
G G ++S + Q+ +VGASGA+FGL+GA + + N L+ + + LI
Sbjct: 619 GIMGNVVSAI------QSPNPAVGASGAIFGLVGAYYTFLSRNQDLFGYSGQRQKSALIE 672
Query: 165 VIGVNMAIGFM-PGIDNMAHIGGFVAGI 191
IG N+ +G P IDN HIGGF+ G+
Sbjct: 673 TIGFNLLLGMTNPMIDNWGHIGGFIGGV 700
>gi|148269479|ref|YP_001243939.1| rhomboid family protein [Thermotoga petrophila RKU-1]
gi|170288153|ref|YP_001738391.1| rhomboid family protein [Thermotoga sp. RQ2]
gi|281411803|ref|YP_003345882.1| Rhomboid family protein [Thermotoga naphthophila RKU-10]
gi|147735023|gb|ABQ46363.1| Rhomboid family protein [Thermotoga petrophila RKU-1]
gi|170175656|gb|ACB08708.1| Rhomboid family protein [Thermotoga sp. RQ2]
gi|281372906|gb|ADA66468.1| Rhomboid family protein [Thermotoga naphthophila RKU-10]
Length = 235
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 89/147 (60%), Gaps = 9/147 (6%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
G+ +R + +++H ++H+L NS A+ + G+ +E+ +G + + Y +G G L + +
Sbjct: 52 GDWFRLITALFVHGGILHILFNSYALYYFGLIVEDIYGTEKFLVGYFFTGIVGNLATHVF 111
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP 176
++ ISVGASGA+FGL+G + T + K V+ L+ +I +N+ GF+P
Sbjct: 112 YHDT-----ISVGASGAIFGLIGILFAAGFRKDTPFFMKPVTGMSLLPIILINVVYGFLP 166
Query: 177 G--IDNMAHIGGFVAGILLGFILLLRP 201
G I+N AH+GGF++G+LLG+ +RP
Sbjct: 167 GTNINNAAHLGGFLSGMLLGYT--MRP 191
>gi|146181679|ref|XP_001023246.2| Rhomboid family protein [Tetrahymena thermophila]
gi|146144109|gb|EAS03001.2| Rhomboid family protein [Tetrahymena thermophila SB210]
Length = 324
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 81/161 (50%), Gaps = 22/161 (13%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
+ Y+ E +R+F ++LH H+++N+ + F LE+ FGF + LLY+LSG GG L
Sbjct: 119 ITYNYEFHRYFVPIYLHGGFPHIISNTFGLFFYAFTLEKQFGFKKFVLLYILSGLGGNLF 178
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI------ 166
S +Q E Q+SVGAS +LFGL + +I N + N+ + + IL++
Sbjct: 179 SGYNQPE-----QMSVGASSSLFGLFPLMILFLIENQDMNKNQKLFYVVYILIMIFANFF 233
Query: 167 -----------GVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
N + ID AH+GGF+ G+ + I
Sbjct: 234 GSSSSPDQGQKKDNQDESDVRIIDTAAHLGGFLTGLCITII 274
>gi|47214956|emb|CAG10778.1| unnamed protein product [Tetraodon nigroviridis]
Length = 903
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/189 (26%), Positives = 88/189 (46%), Gaps = 14/189 (7%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL-- 115
+ YR + ++LHA ++H + + + LE+ G++RI ++YV SG G L S L
Sbjct: 694 QFYRLWLSLFLHAGLLHCAVTVVFQMTVLRDLEKLAGWVRISIIYVFSGITGNLASALFL 753
Query: 116 --HQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
+ + + + VG +G+ FGLL E+ W + + L+ ++ G
Sbjct: 754 PYRAESTLGVVSLQVGPAGSQFGLLACLFVELFQAWQMLEKPWKAFLKLLTIVLFLFLCG 813
Query: 174 FMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWV 233
+P +DN+AHI GF++G+LL F L PY+ G ++K L ++
Sbjct: 814 LLPWMDNIAHIFGFLSGLLLSFAFL----------PYLTFGTSDKYRKRVLIALSLLAYI 863
Query: 234 ISVVVLFVW 242
L VW
Sbjct: 864 GLFASLIVW 872
>gi|146418118|ref|XP_001485025.1| hypothetical protein PGUG_02754 [Meyerozyma guilliermondii ATCC
6260]
Length = 648
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 14/178 (7%)
Query: 41 TLKKLGGLSRNLVVYD----GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
+L +L GLS + Y+ + YR + ++LHA +H++ N L + +G +E G +
Sbjct: 287 SLSELCGLSGIPIEYNRYEPDQWYRIITPIFLHAGFLHIIFNLLLQVTMGASIERQIGVI 346
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII----TNWTLY 152
+ ++Y++SG GG +L S G SGALFG++ ++ + N LY
Sbjct: 347 KFAIIYLMSGIGGFVLGANFSPNGI----ASTGCSGALFGIVATNIIMFVYCGRKNTNLY 402
Query: 153 TNKCVSITMLILV--IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
K + + I++ I V+ +G +PG+DN +H+GGF G+L +LL P + YV G
Sbjct: 403 GTKHYVLFIFIMLTEIVVSFVLGLLPGLDNFSHLGGFAMGLLTSILLLQDPFFVYVDG 460
>gi|426346562|ref|XP_004040945.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Gorilla gorilla
gorilla]
Length = 856
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 768 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 801
>gi|426346560|ref|XP_004040944.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Gorilla gorilla
gorilla]
Length = 827
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 739 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 772
>gi|402901170|ref|XP_003913529.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 2 [Papio
anubis]
Length = 828
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 625 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 684
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 685 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 739
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 740 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 773
>gi|397484236|ref|XP_003813283.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Pan paniscus]
Length = 856
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 768 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 801
>gi|397484234|ref|XP_003813282.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Pan paniscus]
Length = 827
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 739 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 772
>gi|395749487|ref|XP_003778952.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 2 [Pongo
abelii]
Length = 833
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 630 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 689
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 690 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 744
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 745 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 778
>gi|355568950|gb|EHH25231.1| hypothetical protein EGK_09013 [Macaca mulatta]
gi|355754404|gb|EHH58369.1| hypothetical protein EGM_08200 [Macaca fascicularis]
Length = 856
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 768 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 801
>gi|301069362|ref|NP_078875.4| inactive rhomboid protein 2 isoform 1 [Homo sapiens]
gi|193806488|sp|Q6PJF5.2|RHDF2_HUMAN RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid 5 homolog 2; AltName: Full=Rhomboid family
member 2; AltName: Full=Rhomboid veinlet-like protein 5;
AltName: Full=Rhomboid veinlet-like protein 6
Length = 856
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 768 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 801
>gi|119609810|gb|EAW89404.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_d [Homo sapiens]
Length = 827
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 739 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 772
>gi|119609807|gb|EAW89401.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 851
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 648 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 707
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 708 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 762
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 763 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 796
>gi|114670631|ref|XP_511699.2| PREDICTED: inactive rhomboid protein 2 isoform 6 [Pan troglodytes]
Length = 856
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 768 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 801
>gi|114670635|ref|XP_001152047.1| PREDICTED: inactive rhomboid protein 2 isoform 3 [Pan troglodytes]
Length = 827
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 739 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 772
>gi|109118388|ref|XP_001104817.1| PREDICTED: rhomboid family member 2-like isoform 2 [Macaca mulatta]
Length = 856
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 768 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 801
>gi|109118386|ref|XP_001104742.1| PREDICTED: rhomboid family member 2-like isoform 1 [Macaca mulatta]
Length = 827
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 739 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 772
>gi|93352558|ref|NP_001005498.2| inactive rhomboid protein 2 isoform 2 [Homo sapiens]
Length = 827
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 739 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 772
>gi|54311128|gb|AAH16034.2| Rhomboid 5 homolog 2 (Drosophila) [Homo sapiens]
gi|158257702|dbj|BAF84824.1| unnamed protein product [Homo sapiens]
Length = 856
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 768 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 801
>gi|45825436|gb|AAS77567.1| rhomboid veinlet-like 5 [Homo sapiens]
Length = 827
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 739 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 772
>gi|395515582|ref|XP_003761980.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1
[Sarcophilus harrisii]
Length = 858
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + I LE+ G+ RI ++Y+LSG G L S +
Sbjct: 655 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 714
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 715 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 769
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G L F L PYI+ G K+ ++K +I
Sbjct: 770 IDNFAHISGFISGFFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 811
Query: 238 VLFV 241
++F+
Sbjct: 812 IIFL 815
>gi|302421084|ref|XP_003008372.1| rhomboid family membrane protein [Verticillium albo-atrum VaMs.102]
gi|261351518|gb|EEY13946.1| rhomboid family membrane protein [Verticillium albo-atrum VaMs.102]
Length = 524
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF + ++LHA +IH+ N L + IG ++E G +R L+Y +G G ++ +
Sbjct: 272 FRFITPIFLHAGLIHIGVNMLLQMTIGKEMEMAIGPVRFFLVYFSAGIFGNVMGANYAG- 330
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
T + S GASGALFG++ + ++ +W + + ++L + + +G +PG+D
Sbjct: 331 ---TGEASTGASGALFGIIALTALDLAYSWKDRRHPVKDLMFVLLDVVICFVLGLLPGLD 387
Query: 180 NMAHIGGFVAGILLGFILLLRPQ 202
N AHIGGF+ G+ LG +L P
Sbjct: 388 NFAHIGGFLMGLCLGICVLHSPN 410
>gi|190346548|gb|EDK38656.2| hypothetical protein PGUG_02754 [Meyerozyma guilliermondii ATCC
6260]
Length = 648
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 94/178 (52%), Gaps = 14/178 (7%)
Query: 41 TLKKLGGLSRNLVVYD----GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
+L +L GLS + Y+ + YR + ++LHA +H++ N L + +G +E G +
Sbjct: 287 SLSELCGLSGIPIEYNRYEPDQWYRIITPIFLHAGFLHIIFNLLLQVTMGASIERQIGVI 346
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII----TNWTLY 152
+ ++Y++SG GG +L S G SGALFG++ ++ + N LY
Sbjct: 347 KFAIIYLMSGIGGFVLGANFSPNGI----ASTGCSGALFGIVATNIIMFVYCGRKNTNLY 402
Query: 153 TNKCVSITMLILV--IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
K + + I++ I V+ +G +PG+DN +H+GGF G+L +LL P + YV G
Sbjct: 403 GTKHYVLFIFIMLTEIVVSFVLGLLPGLDNFSHLGGFAMGLLTSILLLQDPFFVYVDG 460
>gi|94968908|ref|YP_590956.1| rhomboid-like protein [Candidatus Koribacter versatilis Ellin345]
gi|94550958|gb|ABF40882.1| Rhomboid-like protein [Candidatus Koribacter versatilis Ellin345]
Length = 365
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 92/167 (55%), Gaps = 25/167 (14%)
Query: 35 FGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
+GP+TA+ GE +R + M+LH ++H+L N A+ +G E +G
Sbjct: 97 YGPATAS---------------GEWWRMLTSMFLHGGILHILVNMFALRNLGYTAELFYG 141
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
++Y+LSGFGG + L + +S +SVGASGA+FG+ GA L+ ++ L +
Sbjct: 142 RKNFLIIYMLSGFGGSAATLLWRPDS-----VSVGASGAIFGVAGA-LAAMVYFKKLPVD 195
Query: 155 KCV---SITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
+ + I + VI N+ IG +P I+N AH+GG VAG +LGF L
Sbjct: 196 RALLKRDIGSIGAVIFYNLLIGAALPIINNAAHVGGLVAGAILGFTL 242
>gi|156404290|ref|XP_001640340.1| predicted protein [Nematostella vectensis]
gi|156227474|gb|EDO48277.1| predicted protein [Nematostella vectensis]
Length = 500
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+IYR + ++LHA +IHLL + I LE G++RI ++Y+ SG GG L+S +
Sbjct: 292 QIYRLWMAIFLHAGIIHLLCTLVFNFTILRDLERMAGWIRISIIYIFSGIGGYLISAI-- 349
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
Q+ VG SG++FG++ E+I +W + +++ L V+ + + +G +P
Sbjct: 350 ---LIPYQVEVGPSGSMFGIIACLFVELIQSWQMVAQPILALLKLCGVVFLLLVVGLLPY 406
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
+DN AH+ GF G L FI L PY+ G ++ N K+
Sbjct: 407 VDNFAHMAGFCFGFCLAFIFL----------PYVTFGRFDRNRKR 441
>gi|166033079|ref|ZP_02235908.1| hypothetical protein DORFOR_02801 [Dorea formicigenerans ATCC
27755]
gi|166027436|gb|EDR46193.1| peptidase, S54 family [Dorea formicigenerans ATCC 27755]
Length = 199
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 91/170 (53%), Gaps = 10/170 (5%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SF +E+S F + + G + ++ Y + M+LH HL+ N + +L
Sbjct: 26 SFMGMTEDSAF------MMEHGAMYVPYLMNGERYYTLITSMFLHFGFSHLMNNMVMLLV 79
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
IG LE + G +R L+Y+ SG G L+S D SQ + +S GASGA+FG++GA L
Sbjct: 80 IGYSLEPEIGKIRFLLIYLGSGLMGNLVSAWF-DVSQGSYAVSAGASGAIFGIVGALLYV 138
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILL 193
I N +S L+L+ G+++ GF G+DN AHIGG V+G LL
Sbjct: 139 AIRNHGRVGE--ISTRGLVLMAGLSLYYGFTAQGVDNAAHIGGLVSGFLL 186
>gi|157427926|ref|NP_001098870.1| inactive rhomboid protein 1 [Bos taurus]
gi|190360184|sp|A7YWH9.1|RHDF1_BOVIN RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|157279163|gb|AAI34589.1| RHBDF1 protein [Bos taurus]
gi|296473636|tpg|DAA15751.1| TPA: rhomboid family 1 [Bos taurus]
Length = 856
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AHI GF++G+ L F L PYI+ G ++L K+
Sbjct: 768 IDNFAHISGFISGLFLSFAFL----------PYISFGKFDLYRKR 802
>gi|419758894|ref|ZP_14285206.1| membrane-associated serine protease [Oenococcus oeni AWRIB304]
gi|419857800|ref|ZP_14380503.1| membrane-associated serine protease [Oenococcus oeni AWRIB202]
gi|421185357|ref|ZP_15642768.1| membrane-associated serine protease [Oenococcus oeni AWRIB318]
gi|421188834|ref|ZP_15646166.1| membrane-associated serine protease [Oenococcus oeni AWRIB419]
gi|421189623|ref|ZP_15646937.1| membrane-associated serine protease [Oenococcus oeni AWRIB422]
gi|421190919|ref|ZP_15648203.1| membrane-associated serine protease [Oenococcus oeni AWRIB548]
gi|421193560|ref|ZP_15650806.1| membrane-associated serine protease [Oenococcus oeni AWRIB553]
gi|421195397|ref|ZP_15652605.1| membrane-associated serine protease [Oenococcus oeni AWRIB568]
gi|421197510|ref|ZP_15654685.1| membrane-associated serine protease [Oenococcus oeni AWRIB576]
gi|399904349|gb|EJN91805.1| membrane-associated serine protease [Oenococcus oeni AWRIB304]
gi|399964167|gb|EJN98821.1| membrane-associated serine protease [Oenococcus oeni AWRIB419]
gi|399964538|gb|EJN99179.1| membrane-associated serine protease [Oenococcus oeni AWRIB318]
gi|399971719|gb|EJO05958.1| membrane-associated serine protease [Oenococcus oeni AWRIB553]
gi|399972713|gb|EJO06912.1| membrane-associated serine protease [Oenococcus oeni AWRIB422]
gi|399973615|gb|EJO07780.1| membrane-associated serine protease [Oenococcus oeni AWRIB548]
gi|399975119|gb|EJO09187.1| membrane-associated serine protease [Oenococcus oeni AWRIB576]
gi|399975822|gb|EJO09857.1| membrane-associated serine protease [Oenococcus oeni AWRIB568]
gi|410497271|gb|EKP88746.1| membrane-associated serine protease [Oenococcus oeni AWRIB202]
Length = 241
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 13 DRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANV 72
D +FH G FS R N GPS +L LGG +L++ G+ YR F+ ++LH+++
Sbjct: 31 DAYLFHS-FGLFSLINRFIN---GPSIQSLILLGGQVSSLIL-KGQWYRLFTPIFLHSSL 85
Query: 73 IHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASG 132
+H+ +N ++ G +E+ FG + L+Y+LSG G LL+ + +SVGASG
Sbjct: 86 MHIFSNMFTLIIFGPFVEKLFGKTKYLLIYLLSGLWGNLLTLIFDPNPN---IVSVGASG 142
Query: 133 ALFGLLGA--SLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAG 190
ALFGL GA S++ N ++ + V L L + IG +D AHIGG ++G
Sbjct: 143 ALFGLFGAMISIAWFNRNNPIFKRQLVVFAALAL-FNLISNIG-DQSVDIWAHIGGLISG 200
Query: 191 ILLGFIL-LLRPQYGYVS 207
IL + QYG V
Sbjct: 201 ILTSLVCNFPSAQYGKVK 218
>gi|299755411|ref|XP_001828645.2| hypothetical protein CC1G_10517 [Coprinopsis cinerea okayama7#130]
gi|298411214|gb|EAU93149.2| hypothetical protein CC1G_10517 [Coprinopsis cinerea okayama7#130]
Length = 502
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 77/140 (55%), Gaps = 6/140 (4%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF + ++LHA +IHLL N LA + ++E D G ++Y +G G +L
Sbjct: 284 FRFITAIFLHAGIIHLLLNMLAQFTLSAQIERDMGSTGFLIVYFAAGIFGNVLG----GN 339
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI--GVNMAIGFMPG 177
SVGASGA+FG L + +++ +W + ++ + I + +AIGF+P
Sbjct: 340 FSLVGIPSVGASGAIFGTLAVTWVDLLAHWKYQYRPVRKVGLVFMTIELAIGVAIGFIPY 399
Query: 178 IDNMAHIGGFVAGILLGFIL 197
+DN AH+GGF+ G+L+G I
Sbjct: 400 VDNFAHLGGFLMGLLVGTIF 419
>gi|162449650|ref|YP_001612017.1| hypothetical protein sce1379 [Sorangium cellulosum So ce56]
gi|161160232|emb|CAN91537.1| hypothetical protein sce1379 [Sorangium cellulosum So ce56]
Length = 565
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 88/170 (51%), Gaps = 11/170 (6%)
Query: 35 FGPST--ATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
FG T A L ++G S V + GE+YR + +LHA+ +HL N LA+ G LE
Sbjct: 199 FGSGTHEAALWRMGANSGEAVRH-GELYRLLASAFLHADPMHLFVNMLALWSFGPMLEAL 257
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
G R LLY S GG L S + +D + SVGASGA++GL+ A + + L
Sbjct: 258 LGPRRFLLLYGASALGGSLASAMLED------RWSVGASGAIWGLMTAGIGVALRPHGLL 311
Query: 153 TNKCVS--ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLR 200
++ + L +G+N+ F PG+D +AH+GG V G L +L R
Sbjct: 312 PPAMIAQMRSRAWLPLGLNLVYSFQPGVDLLAHLGGGVVGFALVVTVLPR 361
>gi|116490957|ref|YP_810501.1| membrane-associated serine protease [Oenococcus oeni PSU-1]
gi|290890431|ref|ZP_06553506.1| hypothetical protein AWRIB429_0896 [Oenococcus oeni AWRIB429]
gi|419859592|ref|ZP_14382246.1| membrane-associated serine protease [Oenococcus oeni DSM 20252 =
AWRIB129]
gi|116091682|gb|ABJ56836.1| Membrane-associated serine protease [Oenococcus oeni PSU-1]
gi|290479827|gb|EFD88476.1| hypothetical protein AWRIB429_0896 [Oenococcus oeni AWRIB429]
gi|410496609|gb|EKP88092.1| membrane-associated serine protease [Oenococcus oeni DSM 20252 =
AWRIB129]
Length = 236
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 13/198 (6%)
Query: 13 DRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANV 72
D +FH G FS R N GPS +L LGG +L++ G+ YR F+ ++LH+++
Sbjct: 26 DAYLFHS-FGLFSLINRFIN---GPSIQSLILLGGQVSSLIL-KGQWYRLFTPIFLHSSL 80
Query: 73 IHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASG 132
+H+ +N ++ G +E+ FG + L+Y+LSG G LL+ + +SVGASG
Sbjct: 81 MHIFSNMFTLIIFGPFVEKLFGKTKYLLIYLLSGLWGNLLTLIFDPNPN---IVSVGASG 137
Query: 133 ALFGLLGA--SLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAG 190
ALFGL GA S++ N ++ + V L L + IG +D AHIGG ++G
Sbjct: 138 ALFGLFGAMISIAWFNRNNPIFKRQLVVFAALAL-FNLISNIG-DQSVDIWAHIGGLISG 195
Query: 191 ILLGFIL-LLRPQYGYVS 207
IL + QYG V
Sbjct: 196 ILTSLVCNFPSAQYGKVK 213
>gi|226822866|gb|ACO83098.1| rhomboid family 1 (predicted) [Dasypus novemcinctus]
Length = 856
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + I LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSICFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLLAVVLSLFTFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AHI GFV+G+ L F L PYI+ G ++L K+
Sbjct: 768 IDNFAHISGFVSGLFLSFAFL----------PYISFGKFDLYRKR 802
>gi|351696488|gb|EHA99406.1| Rhomboid family member 2 [Heterocephalus glaber]
Length = 855
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + I LE+ G+ RI +++VLSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGLVHCLVSVIFQMTILRDLEKLAGWHRIAIIFVLSGITGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFVCGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 767 IDNIAHIFGFLSGMLLAFAFL----------PYITFGTSDKYRK 800
>gi|295425277|ref|ZP_06817980.1| rhomboid protease GluP [Lactobacillus amylolyticus DSM 11664]
gi|295065053|gb|EFG55958.1| rhomboid protease GluP [Lactobacillus amylolyticus DSM 11664]
Length = 226
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 96/183 (52%), Gaps = 14/183 (7%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
+F SEN TATL KLG ++ VV + +R + +LH + HL++N + I +
Sbjct: 28 TFMGGSEN------TATLVKLGAMNNYAVVAGHQWWRLITAQFLHIGIWHLVSNIVMIYY 81
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLS 143
+G+ +E G R L+Y+LSG GG LLS D+S I GAS ALFGL GA ++
Sbjct: 82 MGLIIEPMLGHWRFLLIYLLSGVGGNLLSLAFGSDKS-----IGAGASTALFGLFGAVIA 136
Query: 144 EIITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
I + V L+L + +N+ I F+P ID HIGG ++G LL + R
Sbjct: 137 LGIRHRANPVVAYVGRQALVLAV-LNLIIDIFLPNIDIYGHIGGLISGFLLAMMSGDRLG 195
Query: 203 YGY 205
GY
Sbjct: 196 KGY 198
>gi|312110225|ref|YP_003988541.1| Rhomboid protease [Geobacillus sp. Y4.1MC1]
gi|311215326|gb|ADP73930.1| Rhomboid protease [Geobacillus sp. Y4.1MC1]
Length = 389
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 84/149 (56%), Gaps = 13/149 (8%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +RFF+ ++LH +HLL N+ A+ ++G+ +E +G R +Y +G
Sbjct: 216 GAKFNPLIQAGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWRFFFIYFTAG 275
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSI--TMLIL 164
F G L S L T +S GASGA+FGL GA ++ T+Y + + T +I
Sbjct: 276 FFGTLGSFLF------TASLSAGASGAIFGLFGA----LLYFGTVYRHLFLQTIGTNIIG 325
Query: 165 VIGVNMAIGFM-PGIDNMAHIGGFVAGIL 192
+I +N+ G + PGIDN HIGG + G L
Sbjct: 326 LIVINLVFGMIVPGIDNAGHIGGLIGGYL 354
>gi|158257764|dbj|BAF84855.1| unnamed protein product [Homo sapiens]
Length = 827
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGDLASAIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 739 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 772
>gi|307192271|gb|EFN75561.1| Rhomboid family member 1 [Harpegnathos saltator]
Length = 872
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 5/148 (3%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR F+ +LHA ++HL L F+ LE+ G LRI +Y + G L S +
Sbjct: 665 QFYRLFTTTFLHAGIVHLAITLLIQYFLMRDLEKLTGSLRIAFIYFIGALAGNLASAIFV 724
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +GA F LL + E++ W + + +++ LIL++ + +G +P
Sbjct: 725 -----PYRAEVGPAGAHFALLATLVVEVLHCWPMLKHPRRALSKLILILMGLLVLGILPW 779
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGY 205
+DN AH+ GF+ G L + L+ +G+
Sbjct: 780 VDNYAHLFGFIFGFLAAYALMPFISFGH 807
>gi|403252324|ref|ZP_10918634.1| Rhomboid family protein [Thermotoga sp. EMP]
gi|402812337|gb|EJX26816.1| Rhomboid family protein [Thermotoga sp. EMP]
Length = 235
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 89/147 (60%), Gaps = 9/147 (6%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
G+ +R + +++H ++H+L NS A+ + G+ +E+ +G + + Y +G G L + +
Sbjct: 52 GDWFRLITALFVHGGILHILFNSYALYYFGLIVEDIYGTEKFLVGYFFTGIVGNLATHVF 111
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP 176
++ ISVGASGA+FGL+G + T + K V+ L+ +I +N+ GF+P
Sbjct: 112 YHDT-----ISVGASGAIFGLIGILFAAGFRKDTPFFMKPVTGMSLLPIILINVVYGFLP 166
Query: 177 G--IDNMAHIGGFVAGILLGFILLLRP 201
G I+N AH+GGF++G+LLG+ +RP
Sbjct: 167 GTNINNAAHLGGFLSGMLLGYT--MRP 191
>gi|323694355|ref|ZP_08108528.1| rhomboid protease GluP [Clostridium symbiosum WAL-14673]
gi|323501595|gb|EGB17484.1| rhomboid protease GluP [Clostridium symbiosum WAL-14673]
Length = 209
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 90/165 (54%), Gaps = 4/165 (2%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+T + K G + L++ GE YR + +++H + HL+ N L + +G LE G ++
Sbjct: 33 NTGFMVKRGAMYAPLILQYGEYYRLLTSVFMHFGIGHLINNMLVLFVLGDNLERALGKVK 92
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ Y+L G G ++S L + + +S GASGA+FG++G + + N + +
Sbjct: 93 YLIFYLLCGIGANIIS-LAVNMGRGYYVVSAGASGAIFGVVGGLVYAVAVNRGRLED--L 149
Query: 158 SITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRP 201
S L++++ V + GF G+DN+AH+GG + GI LG I +P
Sbjct: 150 STQQLMILVAVTLYHGFTSTGVDNVAHVGGLLIGIFLGMIFYRKP 194
>gi|315652544|ref|ZP_07905527.1| rhomboid family protein [Lachnoanaerobaculum saburreum DSM 3986]
gi|419718196|ref|ZP_14245528.1| peptidase, S54 family [Lachnoanaerobaculum saburreum F0468]
gi|315485201|gb|EFU75600.1| rhomboid family protein [Lachnoanaerobaculum saburreum DSM 3986]
gi|383305641|gb|EIC96994.1| peptidase, S54 family [Lachnoanaerobaculum saburreum F0468]
Length = 205
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 88/145 (60%), Gaps = 4/145 (2%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
+ +GE YR + M++H + H++ N L ++ +G KLE+ G + ++Y+LSG + S
Sbjct: 50 IKNGEYYRLATSMFMHFGIEHIVNNMLILVLLGGKLEDIMGHFKFFIIYMLSGILANIAS 109
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L Q + +S GASGA+FG++GA L+ ++ + N +++ + + +G+ + G
Sbjct: 110 DLAQTMTGD-FAVSAGASGAIFGVVGALLASLVLSKGKIKN--LNLYQIAVSLGLMLYAG 166
Query: 174 F-MPGIDNMAHIGGFVAGILLGFIL 197
F G+DN+AH+GG V+G+ +G IL
Sbjct: 167 FKTTGVDNIAHVGGAVSGVFIGLIL 191
>gi|167517132|ref|XP_001742907.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779531|gb|EDQ93145.1| predicted protein [Monosiga brevicollis MX1]
Length = 323
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 72/125 (57%), Gaps = 5/125 (4%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R + +++HA IHLL L +GV LE G+LRI L+Y++SG GG L+S L
Sbjct: 122 WRILTALFMHAGAIHLLVMLYVQLSVGVPLERKAGWLRIALIYLISGCGGNLVSALFVPN 181
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S Q VGASGA++GL+ +L +++ W L + V + ++ V + +G P +D
Sbjct: 182 SAQ-----VGASGAVYGLVATALVDLMHCWRLLKSPWVQLGTYLIQTAVLLLLGTTPWLD 236
Query: 180 NMAHI 184
N AH+
Sbjct: 237 NFAHV 241
>gi|441659440|ref|XP_004091347.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1
[Nomascus leucogenys]
Length = 855
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>gi|403273152|ref|XP_003928385.1| PREDICTED: inactive rhomboid protein 1 [Saimiri boliviensis
boliviensis]
Length = 852
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 649 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 708
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 709 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 763
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 764 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 805
Query: 238 VLF 240
V+F
Sbjct: 806 VVF 808
>gi|395835625|ref|XP_003790777.1| PREDICTED: inactive rhomboid protein 1 [Otolemur garnettii]
Length = 856
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILVRPWRAFFKLLAVVLFLFTFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 768 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 809
Query: 238 VLF 240
V+F
Sbjct: 810 VVF 812
>gi|390471022|ref|XP_003734416.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1-like
[Callithrix jacchus]
Length = 836
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 633 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 692
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 693 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 747
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 748 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 789
Query: 238 VLF 240
V+F
Sbjct: 790 VVF 792
>gi|190360186|sp|B1MT31.1|RHDF1_CALMO RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|169246092|gb|ACA51068.1| rhomboid family 1 (predicted) [Callicebus moloch]
Length = 855
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>gi|190360185|sp|B0VX73.1|RHDF1_CALJA RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|167427357|gb|ABZ80332.1| rhomboid family 1 (predicted) [Callithrix jacchus]
Length = 855
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>gi|66475270|ref|XP_627451.1| conserved protein with 6 transmembrane domain [Cryptosporidium
parvum Iowa II]
gi|46228919|gb|EAK89768.1| conserved protein with 6 transmembrane domain [Cryptosporidium
parvum Iowa II]
Length = 990
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 89/174 (51%), Gaps = 16/174 (9%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
S NS+ GP + TL LGGL N + GE+ R F MW+H IH+ N ++ +G +
Sbjct: 607 SMNSMLGPCSKTLSALGGLVVN-ELRQGEMIRMFWAMWMHTGFIHIGFNVISQAQLGYMI 665
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E D+G LR LL+ LSG GG L + ++VG+SG LFG+ AS+ NW
Sbjct: 666 EPDWGILRFFLLFFLSGVGGNLAVAVI-----SPCSLTVGSSGGLFGITAASIPYTFENW 720
Query: 150 TLYTNKCVSITMLI-----LVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
N + M I L+IG M + F + AHIGGFV GIL F +
Sbjct: 721 ---NNLPAPMFMFIFSLFSLIIG--MILSFTGVTNPWAHIGGFVVGILYTFATM 769
>gi|393218506|gb|EJD03994.1| rhomboid-domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 528
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 4/138 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF + ++LHA IH++ N LA L++ +LE + G L+Y +G G +L
Sbjct: 309 FRFITPIFLHAGFIHIILNMLAQLYVSAQLEREMGTGGFFLVYFAAGIFGNILG----GN 364
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
SVGASGA+FG + S ++ +W + + +I+ + + + +GF+P +D
Sbjct: 365 FSLVGVPSVGASGAIFGTVAVSWVDLFAHWKYHYRPSTRLIYMIIELILGIGMGFIPYVD 424
Query: 180 NMAHIGGFVAGILLGFIL 197
N AH+GGF+ G+L+G I
Sbjct: 425 NFAHLGGFLMGLLVGMIF 442
>gi|67608816|ref|XP_666907.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657985|gb|EAL36682.1| hypothetical protein Chro.60098 [Cryptosporidium hominis]
Length = 985
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 89/174 (51%), Gaps = 16/174 (9%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
S NS+ GP + TL LGGL N + GE+ R F MW+H IH+ N ++ +G +
Sbjct: 602 SMNSMLGPCSKTLSALGGLVVN-ELRQGEMIRMFWAMWMHTGFIHIGFNVISQAQLGYMI 660
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E D+G LR LL+ LSG GG L + ++VG+SG LFG+ AS+ NW
Sbjct: 661 EPDWGILRFFLLFFLSGVGGNLAVAVI-----SPCSLTVGSSGGLFGITAASIPYTFENW 715
Query: 150 TLYTNKCVSITMLI-----LVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
N + M I L+IG M + F + AHIGGFV GIL F +
Sbjct: 716 ---NNLPAPMFMFIFSLFSLIIG--MILSFTGVTNPWAHIGGFVVGILYTFATM 764
>gi|205374009|ref|ZP_03226809.1| hypothetical protein Bcoam_12572 [Bacillus coahuilensis m4-4]
Length = 392
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 99/186 (53%), Gaps = 14/186 (7%)
Query: 33 SLFGPST--ATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
LFG ST TL G N ++ +GE +RF + ++LH HLL N+ A++ IG ++E
Sbjct: 199 QLFGGSTNPETLVFFGA-KFNPLILEGEWWRFITPIFLHIGFFHLLMNTFALVLIGREVE 257
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
+ FG R +Y+L+G G + S + +S GASGA+FG GA L +T
Sbjct: 258 KIFGKWRFLFIYLLAGIIGCIASFYF-----NPVGLSAGASGAIFGCFGALLY---FGYT 309
Query: 151 LYTNKCVSITMLILVI-GVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
++ M ILVI G+N+ +GF +PGIDN HIGG V G + I+ P+ VS
Sbjct: 310 FPQVFFRTMGMNILVIVGLNLVLGFTVPGIDNAGHIGGLVGGFIATGIVYF-PRKKSVSQ 368
Query: 209 PYIAPG 214
Y G
Sbjct: 369 LYYVTG 374
>gi|239617958|ref|YP_002941280.1| Rhomboid family protein [Kosmotoga olearia TBF 19.5.1]
gi|239506789|gb|ACR80276.1| Rhomboid family protein [Kosmotoga olearia TBF 19.5.1]
Length = 285
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 100/193 (51%), Gaps = 13/193 (6%)
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
GG+SR ++ G Y + ++LH N++H+L N A+ +G +E +G + + Y +S
Sbjct: 44 GGISRGALL-RGLFYTPLTALFLHGNMLHILFNMYALFQLGYLVEGIYGMRKFLIFYFVS 102
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G G L + + T I++G+S A+FGL+G + T K V+ L+ +
Sbjct: 103 GIIGNLTA------ATMTPYITIGSSSAIFGLVGVLFALGFKKDTPVVLKSVTGLSLLPI 156
Query: 166 IGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKY 224
I +N+ G M P I N AH+GG +AG LLG+ +L PQY V P ++ + K P+
Sbjct: 157 ILLNLMFGLMIPNISNSAHVGGLIAGSLLGWFVL--PQYAIVRKPRVS---RVKQKSPEE 211
Query: 225 QCHQKLLWVISVV 237
LL + ++
Sbjct: 212 IARDILLKYVPIL 224
>gi|297539145|ref|YP_003674914.1| Rhomboid family protein [Methylotenera versatilis 301]
gi|297258492|gb|ADI30337.1| Rhomboid family protein [Methylotenera versatilis 301]
Length = 346
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 94/197 (47%), Gaps = 33/197 (16%)
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
DGE +R + M+LH +IHLL N ++ G +E +G LR +YVLSG G L+S +
Sbjct: 60 DGEWWRLGTAMFLHFGIIHLLVNVWSLWDAGQLVERMYGHLRFAGIYVLSGLTGNLVSLV 119
Query: 116 HQDESQQTLQISVGASGALFGLLGA----------SLSEIITNWTLYTNKCVSITMLILV 165
Q + +S GASGA+FG+ GA S++ W + S+ ++
Sbjct: 120 IQGNA----AVSGGASGAIFGVYGALLTFLWRERQSIARHEFRWLFWGASVFSVATIVF- 174
Query: 166 IGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQYGYVS--GPYIAPGY------- 215
GF+ PGIDN AHIGGF+ GI +L + VS +A G
Sbjct: 175 -------GFIVPGIDNSAHIGGFLTGIFSSILLSQSIEVKPVSRNTKLLAAGVIVLACVV 227
Query: 216 -ELNHKKPKYQCHQKLL 231
LN PKY+ +LL
Sbjct: 228 LVLNIPAPKYRWSDELL 244
>gi|149750980|ref|XP_001494786.1| PREDICTED: inactive rhomboid protein 1-like [Equus caballus]
Length = 856
Score = 80.9 bits (198), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AHI GF++G+ L F L PYI+ G ++L K+
Sbjct: 768 IDNFAHISGFISGLFLSFAFL----------PYISFGKFDLYRKR 802
>gi|300823026|ref|ZP_07103160.1| peptidase, S54 family protein [Escherichia coli MS 119-7]
gi|417224822|ref|ZP_12028113.1| peptidase, S54 family [Escherichia coli 96.154]
gi|417268148|ref|ZP_12055509.1| peptidase, S54 family [Escherichia coli 3.3884]
gi|423708594|ref|ZP_17682972.1| 40-residue YVTN family beta-propeller [Escherichia coli B799]
gi|432375777|ref|ZP_19618789.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE12]
gi|432833688|ref|ZP_20067234.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE136]
gi|300524375|gb|EFK45444.1| peptidase, S54 family protein [Escherichia coli MS 119-7]
gi|385707931|gb|EIG44956.1| 40-residue YVTN family beta-propeller [Escherichia coli B799]
gi|386199870|gb|EIH98861.1| peptidase, S54 family [Escherichia coli 96.154]
gi|386230506|gb|EII57861.1| peptidase, S54 family [Escherichia coli 3.3884]
gi|430901150|gb|ELC23133.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE12]
gi|431388187|gb|ELG71925.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE136]
Length = 625
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 2/141 (1%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
GE +R FS ++LH++ HLL N A+L +G E G R+ ++++ SG GGL+S +
Sbjct: 59 GESWRLFSSVFLHSSFSHLLMNMFALLVVGAVAERILGKWRLLIIWLFSGVFGGLISACY 118
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITN--WTLYTNKCVSITMLILVIGVNMAIGF 174
+ ISVGASGA+ G+ GA+L+ + + T + N+ ++L +V +
Sbjct: 119 ALRDSDQIVISVGASGAIMGIAGAALATQLASGAGTYHKNQRRVFSLLGMVALTLLYGAR 178
Query: 175 MPGIDNMAHIGGFVAGILLGF 195
GIDN HIGG +AG +G+
Sbjct: 179 QAGIDNACHIGGLIAGGAMGW 199
>gi|284005108|ref|NP_001164883.1| rhomboid family member 1 [Oryctolagus cuniculus]
gi|218157236|gb|ACK58461.1| rhomboid family 1 (predicted) [Oryctolagus cuniculus]
Length = 856
Score = 80.5 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AH+ GFV+G+ L F L PYI+ G ++L K+
Sbjct: 768 IDNFAHVSGFVSGLFLSFAFL----------PYISFGKFDLYRKR 802
>gi|183396440|gb|ACC62115.1| rhomboid family 1 (predicted) [Rhinolophus ferrumequinum]
Length = 856
Score = 80.5 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AHI GFV+G+ L F L PY++ G ++L K+
Sbjct: 768 IDNFAHISGFVSGLFLSFAFL----------PYVSFGRFDLYRKR 802
>gi|426380485|ref|XP_004056893.1| PREDICTED: inactive rhomboid protein 1-like [Gorilla gorilla
gorilla]
Length = 876
Score = 80.5 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 673 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 732
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 733 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 787
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 788 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 829
Query: 238 VLF 240
V+F
Sbjct: 830 VVF 832
>gi|15680161|gb|AAH14425.1| Rhomboid 5 homolog 1 (Drosophila) [Homo sapiens]
Length = 855
Score = 80.5 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>gi|10438710|dbj|BAB15318.1| unnamed protein product [Homo sapiens]
Length = 855
Score = 80.5 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>gi|397476068|ref|XP_003809433.1| PREDICTED: inactive rhomboid protein 1 [Pan paniscus]
Length = 876
Score = 80.5 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 673 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 732
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 733 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 787
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 788 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 829
Query: 238 VLF 240
V+F
Sbjct: 830 VVF 832
>gi|332844857|ref|XP_510701.3| PREDICTED: inactive rhomboid protein 1 [Pan troglodytes]
gi|410226938|gb|JAA10688.1| rhomboid 5 homolog 1 [Pan troglodytes]
gi|410253062|gb|JAA14498.1| rhomboid 5 homolog 1 [Pan troglodytes]
gi|410292752|gb|JAA24976.1| rhomboid 5 homolog 1 [Pan troglodytes]
gi|410338761|gb|JAA38327.1| rhomboid 5 homolog 1 [Pan troglodytes]
Length = 855
Score = 80.5 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>gi|297697614|ref|XP_002825944.1| PREDICTED: inactive rhomboid protein 1 [Pongo abelii]
Length = 855
Score = 80.5 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>gi|281183140|ref|NP_001162285.1| inactive rhomboid protein 1 [Papio anubis]
gi|190360187|sp|A9L8T6.1|RHDF1_PAPAN RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|160904112|gb|ABX52099.1| rhomboid 5 homolog 1 (predicted) [Papio anubis]
Length = 855
Score = 80.5 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>gi|190341097|ref|NP_071895.3| inactive rhomboid protein 1 [Homo sapiens]
gi|426380501|ref|XP_004056901.1| PREDICTED: inactive rhomboid protein 1-like [Gorilla gorilla
gorilla]
gi|190360226|sp|Q96CC6.2|RHDF1_HUMAN RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Epidermal growth factor receptor-related protein;
AltName: Full=Rhomboid 5 homolog 1; AltName:
Full=Rhomboid family member 1; AltName: Full=p100hRho
gi|66350797|emb|CAI95608.1| rhomboid 5 homolog 1 (Drosophila) [Homo sapiens]
gi|119606282|gb|EAW85876.1| rhomboid 5 homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|158255790|dbj|BAF83866.1| unnamed protein product [Homo sapiens]
Length = 855
Score = 80.5 bits (197), Expect = 5e-13, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>gi|291521749|emb|CBK80042.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Coprococcus catus GD/7]
Length = 211
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 85/155 (54%), Gaps = 10/155 (6%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
++ + E YR +C ++H + HL N L + +IG LE G + ++Y+ +G G +
Sbjct: 57 IIEEHEYYRLLTCTFIHFGISHLFNNMLVLAYIGDNLERALGKFKYLIVYLAAGVGSSAV 116
Query: 113 SC---LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVN 169
S + +DE +S GASGA+FG++GA L +I N + ++ L+L G +
Sbjct: 117 SAVWSMIKDE----YSVSGGASGAIFGVVGALLVIVIRNRGQLED--LNSRQLMLFAGFS 170
Query: 170 MAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQY 203
+ G GIDNMAHI GFV G LLG +L R +Y
Sbjct: 171 IYHGVTSAGIDNMAHISGFVIGALLGGLLYRRKRY 205
>gi|295107889|emb|CBL21842.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Ruminococcus obeum A2-162]
Length = 200
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 95/170 (55%), Gaps = 7/170 (4%)
Query: 36 GPSTATLKKL--GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
G S T+ L G +++ GE YR F+CM+LH + HLL N L + +G +LE
Sbjct: 31 GSSQNTIHMLDCGAAYTPMIIEGGEYYRLFTCMFLHFGIEHLLNNMLVLFVLGSRLERVI 90
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G ++ ++Y++ G G ++S L + +S +S GASGA+F ++GA + ++ N
Sbjct: 91 GKIKFLIIYLVGGLLGNVISVLVELKSMD-FAVSAGASGAVFAVMGAMIYIVVRNKGWLG 149
Query: 154 NKCVSITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRPQ 202
+ +S ++++ ++ GF G+DN AH+ G V G+++ ILL P+
Sbjct: 150 D--LSARQILVMAFFSLYYGFTSTGVDNTAHVAGLVCGMMIS-ILLYHPR 196
>gi|222099054|ref|YP_002533622.1| Rhomboid family protein precursor [Thermotoga neapolitana DSM 4359]
gi|221571444|gb|ACM22256.1| Rhomboid family protein precursor [Thermotoga neapolitana DSM 4359]
Length = 236
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 86/143 (60%), Gaps = 7/143 (4%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
G+ +R + +++H ++H+L NS A+ + G+ +E+ +G + Y +G G + + +
Sbjct: 53 GDWFRLITALFVHGGILHILFNSYALYYFGLIVEDIYGSEKFLFSYFFTGVVGNIATHIF 112
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP 176
++ ISVGASGA+FGL+G + T + K V+ L+ +I +N+ GF+P
Sbjct: 113 YHDT-----ISVGASGAIFGLIGVLFAAGFRKDTPFFMKPVTGVSLLPIILINVVYGFLP 167
Query: 177 G--IDNMAHIGGFVAGILLGFIL 197
G I+N AH+GGF++G+LLG+ +
Sbjct: 168 GTNINNAAHLGGFLSGMLLGYTM 190
>gi|328776234|ref|XP_395087.4| PREDICTED: rhomboid family member 1 [Apis mellifera]
Length = 894
Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 27/187 (14%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR F+ M+LHA ++HL L F+ LE+ G LRI L+Y + G L S +
Sbjct: 687 QFYRLFTTMFLHAGILHLSITLLVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 746
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +GA F LL + E++ W + + +++ LI V+ + +G +P
Sbjct: 747 -----PYRAEVGPAGAHFALLATLIVEVLHCWPMLKHPRRALSKLIFVLIGLLILGILPW 801
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQK--LLWV-- 233
+DN AH+ GF+ G L + LL P+I+ G +Y +K L+W+
Sbjct: 802 VDNYAHLFGFIFGFLAAYALL----------PFISFG--------QYDRRRKIWLIWICM 843
Query: 234 ISVVVLF 240
I +VVLF
Sbjct: 844 ILIVVLF 850
>gi|380027526|ref|XP_003697473.1| PREDICTED: inactive rhomboid protein 1-like [Apis florea]
Length = 1022
Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats.
Identities = 58/187 (31%), Positives = 93/187 (49%), Gaps = 27/187 (14%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR F+ M+LHA ++HL L F+ LE+ G LRI L+Y + G L S +
Sbjct: 815 QFYRLFTTMFLHAGILHLSITLLVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 874
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +GA F LL + E++ W + + +++ LI V+ + +G +P
Sbjct: 875 -----PYRAEVGPAGAHFALLATLIVEVLHCWPMLKHPRRALSKLIFVLIGLLILGILPW 929
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQK--LLWV-- 233
+DN AH+ GF+ G L + LL P+I+ G +Y +K L+W+
Sbjct: 930 VDNYAHLFGFIFGFLAAYALL----------PFISFG--------QYDRRRKIWLIWICM 971
Query: 234 ISVVVLF 240
I +VVLF
Sbjct: 972 ILIVVLF 978
>gi|320592945|gb|EFX05354.1| rhomboid family membrane protein [Grosmannia clavigera kw1407]
Length = 734
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 80/145 (55%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M++HA +IH+ N + L +G +E G +R ++Y+ SG G +L +
Sbjct: 475 QWFRFIVPMFMHAGLIHIGFNMMLQLTMGRDMERAIGSIRFFIVYICSGIFGFVLGGNYA 534
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
T S GASGALFG++ +L +++ +W N + + L + ++ +G +PG
Sbjct: 535 ----ATGISSTGASGALFGVIALTLLDLLYSWRDRRNPVKDLMFIFLDVLISFVLGLLPG 590
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF G+ LG +L P
Sbjct: 591 LDNFSHIGGFFMGLALGVSVLHSPN 615
>gi|15643350|ref|NP_228394.1| hypothetical protein TM0584 [Thermotoga maritima MSB8]
gi|418045242|ref|ZP_12683338.1| Rhomboid family protein [Thermotoga maritima MSB8]
gi|4981102|gb|AAD35669.1|AE001733_6 conserved hypothetical protein [Thermotoga maritima MSB8]
gi|351678324|gb|EHA61471.1| Rhomboid family protein [Thermotoga maritima MSB8]
Length = 235
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 87/143 (60%), Gaps = 7/143 (4%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
G+ +R + +++H ++H+L NS A+ + G+ +E+ +G + + Y +G G L + +
Sbjct: 52 GDWFRLITALFVHGGILHILFNSYALYYFGLIVEDIYGTEKFLVGYFFTGIVGNLATHVF 111
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP 176
++ ISVGASGA+FGL+G + T + K V+ L+ +I +N+ GF+P
Sbjct: 112 YHDT-----ISVGASGAIFGLIGILFAAGFRKDTPFFMKPVTGVSLLPIILINVVYGFLP 166
Query: 177 G--IDNMAHIGGFVAGILLGFIL 197
G I+N AH+GGF++G+LLG+ +
Sbjct: 167 GTNINNAAHLGGFLSGMLLGYTM 189
>gi|157273306|gb|ABV27205.1| integral membrane protein Rhomboid family protein [Candidatus
Chloracidobacterium thermophilum]
Length = 386
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 63/186 (33%), Positives = 86/186 (46%), Gaps = 24/186 (12%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
L G +R L+ GE++R M+LH VIHL+ N A+ +G +LE +G R +
Sbjct: 60 VLTAFGACNRKLIA-QGELWRLVVPMFLHIGVIHLVANMYALWVVGPQLESLYGSARFTI 118
Query: 101 LYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT 160
LYVLSG GG + S I GASGALFG+ GA L + + V T
Sbjct: 119 LYVLSGIGGFVASYFFAHPE----SIGAGASGALFGMFGALLV-FVYKYRSEIPPLVRAT 173
Query: 161 M---LILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYE 216
M + L + +N+ I F +P I H+GG + GI L + PY P
Sbjct: 174 MRRGVWLTLALNLIITFSIPFISRSGHVGGLLTGICLALFI-----------PYSPPS-- 220
Query: 217 LNHKKP 222
HK P
Sbjct: 221 -EHKTP 225
>gi|366164287|ref|ZP_09464042.1| rhomboid family protein [Acetivibrio cellulolyticus CD2]
Length = 519
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 84/155 (54%), Gaps = 9/155 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N + GE +RF + ++LHA++ HL NSL++ G +E +G + +Y+ +G
Sbjct: 215 GAKENFSIMSGEYWRFITPIFLHADLEHLFANSLSLFVFGRIVEGMYGHKKFTFIYLAAG 274
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
G + S + S VGASG++FG GA L + N + + +LI+++
Sbjct: 275 VIGNVASFMFSTYS------GVGASGSIFGFFGALLYLWVENPAAFR-RYFGNNILIMIV 327
Query: 167 GVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLR 200
+N+A GF PGIDN AH+GG + G L I+ L+
Sbjct: 328 -INLAYGFASPGIDNFAHVGGLIGGFLTSGIVKLK 361
>gi|58337771|ref|YP_194356.1| hypothetical protein LBA1506 [Lactobacillus acidophilus NCFM]
gi|58255088|gb|AAV43325.1| putative membrane protein [Lactobacillus acidophilus NCFM]
Length = 226
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/161 (36%), Positives = 90/161 (55%), Gaps = 12/161 (7%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
L K+G ++ VV + +R F+ +LH V+HL++N++ I ++G +E G R +
Sbjct: 38 VLMKMGAMNNFAVVAGHQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYMEPIMGHTRFLV 97
Query: 101 LYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSI- 159
Y+L+G GG L+S + +S GAS ALFGL GA + + N + N +S
Sbjct: 98 TYLLAGIGGNLMSLAFSADR----GLSAGASTALFGLFGAMTAIGLRN---FRNPMISYL 150
Query: 160 --TMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
L+L + +N+A+ F+PGID HIGG +AG LL IL
Sbjct: 151 GRQALVLAL-INLALDIFVPGIDIWGHIGGLIAGFLLAIIL 190
>gi|323486504|ref|ZP_08091827.1| rhomboid protease GluP [Clostridium symbiosum WAL-14163]
gi|355629057|ref|ZP_09050194.1| hypothetical protein HMPREF1020_04273 [Clostridium sp. 7_3_54FAA]
gi|323400207|gb|EGA92582.1| rhomboid protease GluP [Clostridium symbiosum WAL-14163]
gi|354819380|gb|EHF03825.1| hypothetical protein HMPREF1020_04273 [Clostridium sp. 7_3_54FAA]
Length = 209
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 89/165 (53%), Gaps = 4/165 (2%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+T + K G + L++ GE YR + +++H + HL+ N L + +G LE G ++
Sbjct: 33 NTGFMVKRGAMYAPLILQYGEYYRLLTSVFMHFGIGHLINNMLVLFVLGDNLERALGKVK 92
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ Y+L G G ++S L + + +S GASGA+FG++G + + N + +
Sbjct: 93 YLIFYLLCGIGANIIS-LAVNMGRGYYVVSAGASGAIFGVVGGLVYAVAVNRGRLED--L 149
Query: 158 SITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRP 201
S L++++ V + GF G+DN AH+GG + GI LG I +P
Sbjct: 150 STQQLMILVAVTLYHGFTSTGVDNAAHVGGLLIGIFLGMIFYRKP 194
>gi|379795908|ref|YP_005325906.1| putative serine protease [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872898|emb|CCE59237.1| putative serine protease [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 487
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 34/206 (16%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIITSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+GA + + + T + K +
Sbjct: 241 MLGIYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGAIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL 217
M+ LVI + +++ FM I+ +AHIGGFV G+L+ I GY
Sbjct: 295 GQLMIALVILIGVSL-FMSNINIVAHIGGFVGGLLITLI-----------------GYYF 336
Query: 218 NHKKPKYQCHQKLLWV--ISVVVLFV 241
N ++KL W+ I+++V+F+
Sbjct: 337 N-------VNRKLFWILLIALLVIFI 355
>gi|398784354|ref|ZP_10547618.1| hypothetical protein SU9_14461 [Streptomyces auratus AGR0001]
gi|396995277|gb|EJJ06295.1| hypothetical protein SU9_14461 [Streptomyces auratus AGR0001]
Length = 303
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 12/150 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +GE YR + M+LH V H+ N L++ ++G LE G R LY+L+G GG LS
Sbjct: 134 VAEGEWYRLLTAMFLHQQVAHIAFNMLSLWWLGPPLEAALGRARFIALYLLAGLGGSALS 193
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
++Q +L GASGA+FGLLGA + ++ Y K V ++++G+N+
Sbjct: 194 YFLAAQNQPSL----GASGAIFGLLGA--TAVLLRRLRYDMKPV-----LILLGLNLVFT 242
Query: 174 FM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
F+ P I AH+GG V G + F ++ P+
Sbjct: 243 FLWPNIAWQAHVGGLVVGAAVAFGMVHAPR 272
>gi|255526224|ref|ZP_05393142.1| Rhomboid family protein [Clostridium carboxidivorans P7]
gi|296185575|ref|ZP_06853984.1| peptidase, S54 (rhomboid) family protein [Clostridium
carboxidivorans P7]
gi|255510064|gb|EET86386.1| Rhomboid family protein [Clostridium carboxidivorans P7]
gi|296049703|gb|EFG89128.1| peptidase, S54 (rhomboid) family protein [Clostridium
carboxidivorans P7]
Length = 323
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 88/164 (53%), Gaps = 21/164 (12%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE YR +CM+LH ++HLL N A+ +G +E+ +G R ++Y LSG
Sbjct: 174 GAKVNYLIARGEYYRLITCMFLHGGIMHLLLNMFALYSLGPFIEKIYGKTRYLIIYFLSG 233
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVS------IT 160
+ S + + +S+GASGA+FGLLGA+L ++ K IT
Sbjct: 234 IVSSIFSYMF------STAVSIGASGAIFGLLGAAL--------IFAMKMKDRIGRGFIT 279
Query: 161 MLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ VI +N+ +GF M +DN H+GG + G + +L + +Y
Sbjct: 280 NIVSVIFINLFMGFSMSNVDNFGHLGGLIGGSAITLLLGIGKRY 323
>gi|326430143|gb|EGD75713.1| hypothetical protein PTSG_07830 [Salpingoeca sp. ATCC 50818]
Length = 628
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 88/172 (51%), Gaps = 16/172 (9%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
NL + +R F+ +++HA I L+ + G ++E GFLR L+Y +SG GG
Sbjct: 423 NLPKNPNQWFRLFTSLFIHAGAIQLVIIMSIQWYAGRQIETQAGFLRTFLVYFISGVGGT 482
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
++ + ++ GA+ A++GLLG L E++ W L + + L+ +I +
Sbjct: 483 TIAAIFSPNL-----VTTGANPAVYGLLGCVLVELLQTWQLLEKPWLQLLKLVAIIAFLL 537
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
+G +P +DN +H+GGF G++ G + L PYI G +++ K+
Sbjct: 538 LVGTLPFLDNWSHVGGFAFGVVAGIVFL----------PYITFGEWDVARKR 579
>gi|84994850|ref|XP_952147.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302308|emb|CAI74415.1| hypothetical protein, conserved [Theileria annulata]
Length = 606
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 87/170 (51%), Gaps = 26/170 (15%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
GGL N + E +R F M++H V HLL N L+ + I +E D+GF+R LLY +
Sbjct: 200 FGGLETNYIRNYKEYFRLFWSMFMHKGVAHLLINLLSQIQILWIIEPDWGFIRTFLLYFI 259
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIIT--NWTL----------- 151
SG G + S S I++G+SGAL+GL G L II N T+
Sbjct: 260 SGLGSSITSA-----SLDPCFITIGSSGALYGLYGGLLPYIIVLGNITISNFLDNFPHYF 314
Query: 152 -----YTNKCVS-ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
YT + + I LI +IGV M GF IDN AH+GG + G+L GF
Sbjct: 315 HCKNFYTIRQLDYIIKLIGIIGVLM--GFTQNIDNYAHLGGCIFGLLWGF 362
>gi|335041089|ref|ZP_08534206.1| Rhomboid family protein [Caldalkalibacillus thermarum TA2.A1]
gi|334179066|gb|EGL81714.1| Rhomboid family protein [Caldalkalibacillus thermarum TA2.A1]
Length = 577
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 82/147 (55%), Gaps = 9/147 (6%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ +GE +R + M+LH + HL+ NSLA+ F+G +E FG R +Y+ +G
Sbjct: 237 GAKWNPLIIEGEYWRLVTPMFLHIGIWHLMFNSLALYFLGGAVERIFGSFRFLWIYMFAG 296
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
G L S T ++ GASGA+FG GA L + L+ + + + ++ ++I
Sbjct: 297 ISGTLASFAF------TPNLAAGASGAIFGCFGALLYFGLKRRNLFF-RTIGMDIIFILI 349
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGIL 192
N+AIGF +P IDN HIGG + G L
Sbjct: 350 -FNLAIGFIIPMIDNYGHIGGLIGGFL 375
>gi|354489445|ref|XP_003506873.1| PREDICTED: inactive rhomboid protein 2 [Cricetulus griseus]
Length = 825
Score = 80.1 bits (196), Expect = 8e-13, Method: Composition-based stats.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 622 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 681
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 682 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPW 736
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 737 IDNIAHIFGFLSGMLLAFAFL----------PYITFGTSDKYRK 770
>gi|331676317|ref|ZP_08377029.1| outer membrane protein [Escherichia coli H591]
gi|417600998|ref|ZP_12251581.1| rhomboid family protein [Escherichia coli STEC_94C]
gi|331076375|gb|EGI47657.1| outer membrane protein [Escherichia coli H591]
gi|345353483|gb|EGW85716.1| rhomboid family protein [Escherichia coli STEC_94C]
Length = 265
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 80/142 (56%), Gaps = 2/142 (1%)
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
GE +R FS ++LH++ HLL N A+L +G E G R+ ++++ SG GGL+S
Sbjct: 58 SGESWRLFSSVFLHSSFSHLLMNMFALLVVGAVAERILGKWRLLIIWLFSGVFGGLISAC 117
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITN--WTLYTNKCVSITMLILVIGVNMAIG 173
+ + ISVGASGA+ G+ GA+L+ + + T + N+ ++L +V +
Sbjct: 118 YALRDSDQIVISVGASGAIMGIAGAALATQLASGAGTYHKNQRRVFSLLGMVALTLLYGA 177
Query: 174 FMPGIDNMAHIGGFVAGILLGF 195
GIDN HIGG +AG +G+
Sbjct: 178 RQAGIDNACHIGGLIAGGAMGW 199
>gi|336234689|ref|YP_004587305.1| rhomboid protease [Geobacillus thermoglucosidasius C56-YS93]
gi|335361544|gb|AEH47224.1| Rhomboid protease [Geobacillus thermoglucosidasius C56-YS93]
Length = 389
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +RFF+ ++LH +HLL N+ A+ ++G+ +E +G R +Y +G
Sbjct: 216 GAKFNPLIQAGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWRFFFIYFTAG 275
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
F G L S L T +S GASGA+FGL GA L L+ T +I +I
Sbjct: 276 FFGTLGSFLF------TASLSAGASGAIFGLFGALLYFGTVYRHLFWQTIG--TNIIGLI 327
Query: 167 GVNMAIGFM-PGIDNMAHIGGFVAGIL 192
+N+ G + PGIDN HIGG + G L
Sbjct: 328 VINLVFGMIVPGIDNAGHIGGLIGGYL 354
>gi|167763036|ref|ZP_02435163.1| hypothetical protein BACSTE_01401 [Bacteroides stercoris ATCC
43183]
gi|167699376|gb|EDS15955.1| peptidase, S54 family [Bacteroides stercoris ATCC 43183]
Length = 771
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 92/174 (52%), Gaps = 8/174 (4%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
SL P+ ++ K G L + G+ +R +C ++H VIH+L N A+L+IG+ LE+
Sbjct: 373 SLLAPTGISIIKWGADFGPLTL-TGDWWRTITCNFIHIGVIHVLMNMYALLYIGIFLEQL 431
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
G R+ Y L+G L S E+ IS GASG++FGL G LS ++ + +
Sbjct: 432 IGGRRLISAYFLTGLFSALASLAMHPET-----ISAGASGSIFGLYGIFLSYLVFHHRIE 486
Query: 153 TNKCVSITMLI--LVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+ S+ I V M+ GIDN AHIGG V+GI+LG I LL ++
Sbjct: 487 KGQRKSLLYSIGFFVFYNLMSGARAEGIDNAAHIGGLVSGIILGIIYLLTDRFA 540
>gi|308198230|ref|XP_001386926.2| Rhomboid-related protein 1 (RRP) (Rhomboid-like protein 1)
[Scheffersomyces stipitis CBS 6054]
gi|149388924|gb|EAZ62903.2| Rhomboid-related protein 1 (RRP) (Rhomboid-like protein 1)
[Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 86/155 (55%), Gaps = 10/155 (6%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
YR + ++LHA +H++ N L + +G +E G L+ ++Y+ SG G LL +
Sbjct: 300 YRVITPIFLHAGFLHIIFNLLLQITMGSSIERHIGVLKYAIIYLSSGIAGFLLGA---NF 356
Query: 120 SQQTLQISVGASGALFGLLGASLSEII----TNWTLYTNKCVSITMLILV--IGVNMAIG 173
+ Q + S GASGALFG++ ++ I N LY + + + I+V I +++ +G
Sbjct: 357 TPQGIA-STGASGALFGIVATNILLFIYCGRKNTNLYGTRHYVLFICIMVGEIIISLVLG 415
Query: 174 FMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+PG+DN +HIGGF G+L + L P + Y+ G
Sbjct: 416 LLPGLDNFSHIGGFAMGVLTAVVFLPDPFFVYIDG 450
>gi|423719255|ref|ZP_17693437.1| rhomboid family protein [Geobacillus thermoglucosidans TNO-09.020]
gi|383368158|gb|EID45433.1| rhomboid family protein [Geobacillus thermoglucosidans TNO-09.020]
Length = 389
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +RFF+ ++LH +HLL N+ A+ ++G+ +E +G R +Y +G
Sbjct: 216 GAKFNPLIQAGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWRFFFIYFTAG 275
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
F G L S L T +S GASGA+FGL GA L L+ T +I +I
Sbjct: 276 FFGTLGSFLF------TASLSAGASGAIFGLFGALLYFGTVYRHLFWQTIG--TNIIGLI 327
Query: 167 GVNMAIGFM-PGIDNMAHIGGFVAGIL 192
+N+ G + PGIDN HIGG + G L
Sbjct: 328 VINLVFGMIVPGIDNAGHIGGLIGGYL 354
>gi|110803398|ref|YP_698757.1| rhomboid family protein [Clostridium perfringens SM101]
gi|110683899|gb|ABG87269.1| rhomboid family protein [Clostridium perfringens SM101]
Length = 342
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 85/151 (56%), Gaps = 9/151 (5%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
+G N +++ GE YR + M+LH+ ++HLL N A+ +G +E +G + ++Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHSGIVHLLFNMYALYILGDFIERIYGAKKYLVIYFV 248
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SG + S + + VGASGA+FGLLGA+L N K + +T +I+
Sbjct: 249 SGIVASIFSLYF------SPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKAL-VTNIIV 300
Query: 165 VIGVNMAIGF-MPGIDNMAHIGGFVAGILLG 194
+I +N+ IG M ID AH GGF+AG +LG
Sbjct: 301 IILLNVFIGLSMSNIDISAHFGGFIAGAILG 331
>gi|417009713|ref|ZP_11945885.1| hypothetical protein AAULH_09078 [Lactobacillus helveticus MTCC
5463]
gi|328464817|gb|EGF36130.1| hypothetical protein AAULH_09078 [Lactobacillus helveticus MTCC
5463]
Length = 226
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
L K+G ++ VV + +R F+ +LH V+HL++N++ I ++G +E G +R +
Sbjct: 38 VLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHVRFLV 97
Query: 101 LYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT 160
Y+L+G GG L S + +S GAS ALFGL GA ++ + N LY +
Sbjct: 98 TYLLAGIGGNLFSLAFSSDR----GLSAGASTALFGLFGAMVAIGLRN--LYNPMISFLG 151
Query: 161 MLILVIG-VNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
LV+ +N+A+ F+PGID HIGG + G LL IL
Sbjct: 152 RQALVLALINLALDIFVPGIDIWGHIGGLITGFLLAIIL 190
>gi|425778005|gb|EKV16152.1| Rhomboid family membrane protein [Penicillium digitatum Pd1]
gi|425780641|gb|EKV18647.1| Rhomboid family membrane protein [Penicillium digitatum PHI26]
Length = 507
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 85/160 (53%), Gaps = 9/160 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YRF +++H IH+ N + +G +E G R + Y SG G +L +
Sbjct: 246 QWYRFIIPIFMHGGFIHIGFNLWVQVTMGADMERMVGMWRYTVTYFASGIFGFVLGGNYA 305
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ L S G SGALFG+L L +++ +W + V + +++L +GV+ +G +PG
Sbjct: 306 AQ----LNPSDGCSGALFGILALFLLDLLYDWPQRESPWVELIIMLLGVGVSFVLGLLPG 361
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
+DN +HIGGF+ G+ +G ++ LR + G PY+A
Sbjct: 362 LDNFSHIGGFIMGLAIGLTIMRSPNALRERIGLARQPYVA 401
>gi|329938622|ref|ZP_08288018.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329302113|gb|EGG46005.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 303
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +G+ YR + M+LH H++ N L++ ++G LE+ G R LY++SG G LS
Sbjct: 135 VAEGQYYRLLTAMFLHGGYAHIIFNMLSLWWLGAPLEKALGRARFLALYLVSGLAGSALS 194
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L +Q +L GASGA+FGL GA + ++ Y + V + +LVI + + G
Sbjct: 195 YLLAAANQPSL----GASGAIFGLFGA--TAVLVRRLNYDMRPV---IALLVINLVLTFG 245
Query: 174 FMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ GI AHIGG VAG+++G+ ++ P+
Sbjct: 246 WS-GIAWEAHIGGLVAGVMIGYAMVHAPR 273
>gi|322693699|gb|EFY85550.1| Rhomboid family protein [Metarhizium acridum CQMa 102]
Length = 500
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 80/143 (55%), Gaps = 4/143 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF ++LHA +IH+ N L + + ++E+ G +R L+Y+ +G G ++
Sbjct: 275 FRFIVPIFLHAGLIHIGFNMLLQMTLAKEMEQAIGSVRFFLVYLSAGIFGFVMG----GN 330
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S GASG+LFG++ +L ++ +WT N + +IL I ++ +G +PG+D
Sbjct: 331 FAAPGIASTGASGSLFGVIALTLLDLFYSWTERRNPVKDLMFIILDIVISFVLGLLPGLD 390
Query: 180 NMAHIGGFVAGILLGFILLLRPQ 202
N +HIGGF+ G+ LG LL P
Sbjct: 391 NFSHIGGFLMGLALGVCLLHSPN 413
>gi|421128003|ref|ZP_15588221.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421133348|ref|ZP_15593496.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410022356|gb|EKO89133.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410434470|gb|EKP83608.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 514
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 350 FFYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 408
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 409 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 463
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN AHIGG V+G L G IL Q+G
Sbjct: 464 DKKNVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|57088635|ref|XP_547222.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Canis lupus
familiaris]
Length = 856
Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/184 (28%), Positives = 87/184 (47%), Gaps = 23/184 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L V+ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 768 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 809
Query: 238 VLFV 241
V+F+
Sbjct: 810 VVFL 813
>gi|431908742|gb|ELK12334.1| Rhomboid family member 2 [Pteropus alecto]
Length = 847
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H + + + + LE+ G+ RI ++++LSG G L S +
Sbjct: 644 QFYRLWLSLFLHAGVVHCFVSIIFQMTVLRDLEKLAGWHRISIIFILSGITGNLASAIFL 703
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 704 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFVCGLLPW 758
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 759 IDNIAHIFGFLSGMLLAFAFL----------PYITFGTSDKYRK 792
>gi|388581677|gb|EIM21984.1| rhomboid-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 476
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 88/165 (53%), Gaps = 6/165 (3%)
Query: 39 TATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRI 98
T L +L G + + +RF ++LH+ ++HL N A+L +G E G L
Sbjct: 260 TMPLYELCGFGMSSTEEPSQSFRFVLPIFLHSGILHLCINLFALLVLGAYAERVLGSLAF 319
Query: 99 GLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVS 158
+++ +G G +L Q SVGASGA+ GL+ SL +++ +W L +
Sbjct: 320 IIVFGAAGIFGNILG----GNFAQVTTPSVGASGAILGLIAVSLVDLLFHWKLERRPGLL 375
Query: 159 ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLG--FILLLRP 201
+T+ I+ + V IG++P +DN AHIGG++ G+LL FI ++ P
Sbjct: 376 LTIHIIELIVMFFIGYIPNLDNFAHIGGWLQGLLLSVFFIPVISP 420
>gi|395768820|ref|ZP_10449335.1| hypothetical protein Saci8_03541 [Streptomyces acidiscabies 84-104]
Length = 298
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 85/150 (56%), Gaps = 12/150 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +G+ YR + M+LH ++IH+L+N+L++ +IG LE G R L+ +SG G L+
Sbjct: 130 VAEGQWYRLLTSMFLHGSIIHILSNALSLWWIGGPLEAALGRARYLALFFVSGLAGSALT 189
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L + +Q +L GASGA+FG+ GA L + + +I ++ +N+ I
Sbjct: 190 YLVAEPNQASL----GASGAIFGVFGAMA-------VLMRRQRYDMRPMIAILVINLIIT 238
Query: 174 F-MPGIDNMAHIGGFVAGILLGFILLLRPQ 202
F GI AH+GG VAG+++G ++ P+
Sbjct: 239 FGWSGIAWQAHVGGLVAGVIIGAGMVYAPR 268
>gi|344232848|gb|EGV64721.1| rhomboid-domain-containing protein [Candida tenuis ATCC 10573]
Length = 535
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 14/178 (7%)
Query: 41 TLKKLGGLSRNLVVYDG----EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
+L +L GLS +V D + YR + +++HA +H+L N L + +G +E G +
Sbjct: 177 SLNQLCGLSGIPIVDDAYDPHQWYRIITPIFIHAGFLHILFNLLLQVTMGFSIERAIGSV 236
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII----TNWTLY 152
+ ++Y+LSG G LL S GASG+LFG++ ++ I N +Y
Sbjct: 237 KYAIIYLLSGVSGFLLGANFTPNGVA----SSGASGSLFGIVATNIVMFIYCGKKNTNMY 292
Query: 153 TNKCVSITMLILV--IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
K + + I+ I V+ +G +PG+DN +HIGGF G+L +LL P + Y G
Sbjct: 293 GTKKFGLFLCIMFGEIVVSFVLGLLPGLDNFSHIGGFAIGVLSSILLLKDPFFVYEDG 350
>gi|346306942|ref|ZP_08849090.1| hypothetical protein HMPREF9457_00799 [Dorea formicigenerans
4_6_53AFAA]
gi|345907306|gb|EGX77017.1| hypothetical protein HMPREF9457_00799 [Dorea formicigenerans
4_6_53AFAA]
Length = 199
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 90/170 (52%), Gaps = 10/170 (5%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SF +E+S F + + G + ++ Y + M+LH HL+ N + +L
Sbjct: 26 SFMGMTEDSAF------MMEHGAMYVPYLMNGERYYTLITSMFLHFGFSHLMNNMVMLLV 79
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
IG LE + G +R +Y+ SG G L+S D SQ + +S GASGA+FG++GA L
Sbjct: 80 IGYSLEPEIGKIRFLFIYLGSGLMGNLVSAWF-DVSQGSYAVSAGASGAIFGIVGALLYV 138
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILL 193
I N +S L+L+ G+++ GF G+DN AHIGG ++G LL
Sbjct: 139 AIRNHGRVGE--ISTRGLVLMAGLSLYYGFTAQGVDNAAHIGGLISGFLL 186
>gi|266621088|ref|ZP_06114023.1| rhomboid protease GluP [Clostridium hathewayi DSM 13479]
gi|288867244|gb|EFC99542.1| rhomboid protease GluP [Clostridium hathewayi DSM 13479]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 91/167 (54%), Gaps = 4/167 (2%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
+T+ + G + LV+ GE YR + +++H + H++ N L + +G LE G +
Sbjct: 34 ENTSFMVAHGAMYAPLVIERGEYYRLITSVFMHFGISHIMNNMLILFILGDNLERALGHI 93
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
+ Y++ G G ++S + + + +S GASGA+FG++G L +I N +
Sbjct: 94 KYLFFYLICGVGANIVSMIVNLGEYRNV-VSAGASGAIFGVIGGLLYAVIINRGRLED-- 150
Query: 157 VSITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRPQ 202
+S L+++I ++ GF G+DN AHI G + GI++G +L +P+
Sbjct: 151 LSTRQLVVMIVCSLYFGFTSTGVDNAAHIAGLLIGIVMGILLYRKPR 197
>gi|421107208|ref|ZP_15567763.1| peptidase, S54 family [Leptospira kirschneri str. H2]
gi|410007727|gb|EKO61413.1| peptidase, S54 family [Leptospira kirschneri str. H2]
Length = 514
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 350 FFYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 408
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 409 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 463
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN +HIGG V G +LG IL Q+G
Sbjct: 464 DKKNVLIMIVTFILTGLLWGLFGGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|417784544|ref|ZP_12432250.1| peptidase, S54 family [Leptospira interrogans str. C10069]
gi|409952361|gb|EKO06874.1| peptidase, S54 family [Leptospira interrogans str. C10069]
Length = 514
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 350 FFYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 408
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 409 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 463
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN AHIGG V+G L G IL Q+G
Sbjct: 464 DKKNVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|417772121|ref|ZP_12420011.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418680537|ref|ZP_13241786.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418703562|ref|ZP_13264446.1| peptidase, S54 family [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|418715819|ref|ZP_13275930.1| peptidase, S54 family [Leptospira interrogans str. UI 08452]
gi|421118289|ref|ZP_15578634.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|400327895|gb|EJO80135.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409946078|gb|EKN96092.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410010137|gb|EKO68283.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410766698|gb|EKR37381.1| peptidase, S54 family [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|410788320|gb|EKR82042.1| peptidase, S54 family [Leptospira interrogans str. UI 08452]
gi|455668108|gb|EMF33357.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Fox 32256]
Length = 514
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 350 FFYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 408
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 409 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 463
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN AHIGG V+G L G IL Q+G
Sbjct: 464 DKKNVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|418679207|ref|ZP_13240471.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418686873|ref|ZP_13248037.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|421090060|ref|ZP_15550861.1| peptidase, S54 family [Leptospira kirschneri str. 200802841]
gi|400320332|gb|EJO68202.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410001323|gb|EKO51937.1| peptidase, S54 family [Leptospira kirschneri str. 200802841]
gi|410738580|gb|EKQ83314.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
Length = 514
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 350 FFYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 408
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 409 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 463
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN +HIGG V G +LG IL Q+G
Sbjct: 464 DKKNVLIMIVTFILTGLLWGLFGGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|357053297|ref|ZP_09114395.1| hypothetical protein HMPREF9467_01367 [Clostridium clostridioforme
2_1_49FAA]
gi|355385874|gb|EHG32920.1| hypothetical protein HMPREF9467_01367 [Clostridium clostridioforme
2_1_49FAA]
Length = 206
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 10/169 (5%)
Query: 44 KLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYV 103
K G + V+ GE YR F+ M+LH V HL N L +L +G K+E+ G ++ + Y+
Sbjct: 41 KHGAVFAPFVILGGEYYRLFTAMFLHFGVSHLANNMLVLLVLGEKMEKALGHIKYLIFYL 100
Query: 104 LSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI-ITNWTL--YTNKCVSIT 160
SG +S Q + +S GASGA+FG++G + I I + L TN+ +
Sbjct: 101 ASGVAANGISLAVQVRTGAA-SVSAGASGAIFGVVGGLVYVIAIHHGQLDGLTNRQLGFM 159
Query: 161 MLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
+L+ + GF G+DN+AHIGG ++G +LG +L R +SG
Sbjct: 160 VLL-----TLYHGFTSTGVDNVAHIGGLISGFILGILLYRRKHAARISG 203
>gi|300361225|ref|ZP_07057402.1| S54 family peptidase [Lactobacillus gasseri JV-V03]
gi|300353844|gb|EFJ69715.1| S54 family peptidase [Lactobacillus gasseri JV-V03]
Length = 228
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 92/168 (54%), Gaps = 8/168 (4%)
Query: 32 NSLFGPSTA--TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
++ G ST TL +LG ++ LV + + +R F+ +LH +H+ +N++ I +IG +
Sbjct: 29 ETIMGGSTNINTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYIGQFM 88
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E G R +Y+LSG GG LLS + +S +S GAS ALFGL G ++ + N
Sbjct: 89 EPLLGHWRFLSVYLLSGIGGNLLSYAYGSDS----VVSAGASTALFGLFGVVIALYLANR 144
Query: 150 TLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFI 196
+ + L L I +N+A+ F ID + H+GG ++G LLG I
Sbjct: 145 AIPAINYLGKQALALAI-INLALDLFASHIDILGHLGGLISGFLLGII 191
>gi|398339922|ref|ZP_10524625.1| hypothetical protein LkirsB1_10989 [Leptospira kirschneri serovar
Bim str. 1051]
Length = 514
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 350 FFYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 408
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 409 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 463
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN +HIGG V G +LG IL Q+G
Sbjct: 464 DKKNVLIMIVTFILTGLLWGLFGGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|418741786|ref|ZP_13298160.1| peptidase, S54 family [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410751234|gb|EKR08213.1| peptidase, S54 family [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 514
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 350 FFYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 408
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 409 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 463
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN +HIGG V G +LG IL Q+G
Sbjct: 464 DKKNVLIMIVTFILTGLLWGLFGGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|148234897|ref|NP_001090673.1| inactive rhomboid protein 2 [Xenopus (Silurana) tropicalis]
gi|193806414|sp|A0JPA1.1|RHDF2_XENTR RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid family member 2
gi|117558553|gb|AAI27322.1| rhbdf2 protein [Xenopus (Silurana) tropicalis]
Length = 826
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 55 YDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
Y + YR + ++LHA VIH + + + + LE+ G+LRI ++Y+LSG G L S
Sbjct: 620 YPDQFYRLWLSLFLHAGVIHCCVSVVFQMTVLRDLEKLAGWLRISIIYILSGITGNLASA 679
Query: 115 LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF 174
L + VG +G+ FGLL E+ +W + + L+ ++ G
Sbjct: 680 LFL-----PYRAEVGPAGSQFGLLACLFVELFQSWQILAKPWKAFLKLLGIVLFLFLFGL 734
Query: 175 MPGIDNMAHIGGFVAGILLGFILL 198
+P IDN+AHI GF++G+LL F L
Sbjct: 735 LPWIDNIAHIFGFLSGLLLSFSFL 758
>gi|392393767|ref|YP_006430369.1| hypothetical protein Desde_2230 [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390524845|gb|AFM00576.1| putative membrane protein [Desulfitobacterium dehalogenans ATCC
51507]
Length = 275
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 94/170 (55%), Gaps = 10/170 (5%)
Query: 33 SLFGPSTAT-LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEE 91
+L G ST T + L G N ++ GE +R F+ M+LH +HL N A+ +G EE
Sbjct: 114 TLAGGSTRTGVLILFGAKVNALIIQGEYWRLFTSMFLHIGFLHLAFNLYALWALGPIAEE 173
Query: 92 DFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTL 151
G +R +Y+LSG G + S L D IS GASGA+FG+LGA + + +
Sbjct: 174 LLGRIRYITVYILSGILGSVASFLFTDA------ISAGASGAIFGILGALV--VYSRRKP 225
Query: 152 YTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLR 200
+ K L +VI +N+++G F GID AH+GG V+G+LL +I ++
Sbjct: 226 FLWKSGFGKSLAVVILINLSLGFFQTGIDVYAHMGGLVSGMLLTWIFSMK 275
>gi|282851375|ref|ZP_06260740.1| peptidase, S54 (rhomboid) family protein [Lactobacillus gasseri
224-1]
gi|282557343|gb|EFB62940.1| peptidase, S54 (rhomboid) family protein [Lactobacillus gasseri
224-1]
Length = 241
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 92/168 (54%), Gaps = 8/168 (4%)
Query: 32 NSLFGPSTA--TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
++ G ST TL +LG ++ LV + + +R F+ +LH +H+ +N++ I ++G +
Sbjct: 29 ETIMGGSTNINTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYVGQFM 88
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E G R +Y+LSG GG LLS + +S +S GAS ALFGL G ++ + N
Sbjct: 89 EPLLGHWRFLSVYLLSGIGGNLLSYAYGSDS----VVSAGASTALFGLFGVVIALYLANR 144
Query: 150 TLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFI 196
+ + L L I +N+A+ F ID + H+GG ++G LLG I
Sbjct: 145 AIPAINYLGKQALALAI-INLALDLFASHIDILGHLGGLISGFLLGII 191
>gi|239637639|ref|ZP_04678611.1| rhomboid family protein [Staphylococcus warneri L37603]
gi|239596857|gb|EEQ79382.1| rhomboid family protein [Staphylococcus warneri L37603]
Length = 484
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH N H+L N L++ G +E G +
Sbjct: 182 SDIKLLDVGGLVHFNVVH-GEWYRLVTSMFLHYNFEHILMNMLSLYIFGKIVESVLGSWK 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y+ +G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLAIYLFAGIFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAILYLSKT-FDKKVI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI + +++ FM I+ MAH+GGFV G+L+ I
Sbjct: 295 GQLLIALVILIGLSL-FMSNINVMAHLGGFVGGLLITLI 332
>gi|410985425|ref|XP_003999023.1| PREDICTED: inactive rhomboid protein 1 [Felis catus]
Length = 856
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L V+ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 768 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 809
Query: 238 VLF 240
V+F
Sbjct: 810 VVF 812
>gi|418701499|ref|ZP_13262424.1| peptidase, S54 family [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410759581|gb|EKR25793.1| peptidase, S54 family [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 514
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 350 FFYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 408
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 409 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 463
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN AHIGG V+G L G IL Q+G
Sbjct: 464 DKKNVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|418689558|ref|ZP_13250679.1| peptidase, S54 family [Leptospira interrogans str. FPW2026]
gi|418729718|ref|ZP_13288265.1| peptidase, S54 family [Leptospira interrogans str. UI 12758]
gi|400361237|gb|EJP17204.1| peptidase, S54 family [Leptospira interrogans str. FPW2026]
gi|410775896|gb|EKR55887.1| peptidase, S54 family [Leptospira interrogans str. UI 12758]
Length = 514
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 350 FFYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 408
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 409 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 463
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN AHIGG V+G L G IL Q+G
Sbjct: 464 DKKNVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|417766158|ref|ZP_12414112.1| peptidase, S54 family [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|400351612|gb|EJP03831.1| peptidase, S54 family [Leptospira interrogans serovar Bulgarica
str. Mallika]
Length = 514
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 350 FFYPDGPSLLEWGA-NRRIETLAGQWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 408
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 409 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 463
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN AHIGG V+G L G IL Q+G
Sbjct: 464 DKKNVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|340380008|ref|XP_003388516.1| PREDICTED: inactive rhomboid protein 1-like [Amphimedon
queenslandica]
Length = 524
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 74/127 (58%), Gaps = 15/127 (11%)
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
+LR+ L+YV+SG GG L+S + E+ +SVGASG+LFGLLG L E++ W N
Sbjct: 350 WLRVILIYVISGVGGLLISGIFIPET-----VSVGASGSLFGLLGVQLVELLQGWKWVKN 404
Query: 155 KCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG 214
CV +T L++ + + +G +P IDN A+IGGF+ G + F+ + PYI+ G
Sbjct: 405 PCVQLTKLLIFDIILLVLGTLPYIDNYANIGGFLFGTVSAFVFV----------PYISVG 454
Query: 215 YELNHKK 221
KK
Sbjct: 455 KWDKVKK 461
>gi|42519493|ref|NP_965423.1| hypothetical protein LJ1618 [Lactobacillus johnsonii NCC 533]
gi|385826288|ref|YP_005862630.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|417837977|ref|ZP_12484215.1| GlpG protein [Lactobacillus johnsonii pf01]
gi|41583781|gb|AAS09389.1| hypothetical protein LJ_1618 [Lactobacillus johnsonii NCC 533]
gi|329667732|gb|AEB93680.1| hypothetical protein LJP_1358c [Lactobacillus johnsonii DPC 6026]
gi|338761520|gb|EGP12789.1| GlpG protein [Lactobacillus johnsonii pf01]
Length = 228
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 92/167 (55%), Gaps = 8/167 (4%)
Query: 33 SLFGPSTA--TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
++ G ST TL +LG ++ LV + + +R F+ +LH +H+ +N++ I ++G +E
Sbjct: 30 TIMGGSTNINTLVRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYMGQFME 89
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
G R +Y+LSG GG LLS + +S +S GAS ALFGL G ++ + N
Sbjct: 90 PLLGHWRFLTVYLLSGIGGNLLSYAYGSDS----VVSAGASTALFGLFGVVIALYLANRA 145
Query: 151 LYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFI 196
+ + L L I +N+A+ F ID + H+GG ++G LLG I
Sbjct: 146 IPAINYLGRQALALAI-INLALDLFASHIDILGHLGGLISGFLLGII 191
>gi|19483909|gb|AAH23469.1| Rhbdf1 protein, partial [Mus musculus]
Length = 621
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 83/166 (50%), Gaps = 16/166 (9%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 417 DQFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIF 476
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP 176
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 477 L-----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP 531
Query: 177 GIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AHI GFV+G+ L F L PYI+ G ++L K+
Sbjct: 532 WIDNFAHISGFVSGLFLSFAFL----------PYISFGKFDLYRKR 567
>gi|421131221|ref|ZP_15591405.1| peptidase, S54 family [Leptospira kirschneri str. 2008720114]
gi|410357472|gb|EKP04727.1| peptidase, S54 family [Leptospira kirschneri str. 2008720114]
Length = 447
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 6/165 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 283 FFYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 341
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 342 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 396
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
+K + M++ I + G GIDN +HIGG V G +LG IL
Sbjct: 397 DKKNVLIMIVTFILTGLLWGLFGGIDNASHIGGLVGGTILGIILF 441
>gi|452975048|gb|EME74867.1| rhomboid protease YggP [Bacillus sonorensis L12]
Length = 512
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 86/156 (55%), Gaps = 10/156 (6%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+T TL + G N ++ GE +RF + + LH +IHL+ N+ A+L +G E FG R
Sbjct: 207 NTETLIRFGA-KENSLILAGEWWRFVTPIILHIGLIHLMFNTFALLSVGAAAERVFGSFR 265
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
++Y+ +G G + S L S GASGA+FG LGA L +N + K +
Sbjct: 266 FLIIYITAGVFGSIGSFLFSPYP------SAGASGAIFGCLGALLFLAFSNRKAFL-KTI 318
Query: 158 SITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGIL 192
+++++I +N+ +GF + IDN HIGG V G+L
Sbjct: 319 GTNIMVMII-LNLGLGFAVSNIDNAGHIGGLVGGLL 353
>gi|372325402|ref|ZP_09519991.1| GlpG-like protein [Oenococcus kitaharae DSM 17330]
gi|366984210|gb|EHN59609.1| GlpG-like protein [Oenococcus kitaharae DSM 17330]
Length = 234
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 96/178 (53%), Gaps = 11/178 (6%)
Query: 36 GPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGF 95
GPS +L LGG +L + GE YR F+ ++LHA+++H+ +N L ++ +G +E+ FG
Sbjct: 41 GPSIQSLVLLGGGVDSLFM-SGEWYRAFTPIFLHASLMHIFSNMLTLVIVGPFVEKLFGK 99
Query: 96 LRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK 155
+ L+Y+++G G LL+ + +SVGASGALFGL G I++ W N
Sbjct: 100 GKFLLIYLITGVWGNLLTFIFDPNPN---VVSVGASGALFGLFGV---MIVSGWYNRNNF 153
Query: 156 CVSITMLIL-VIGVNMAIGFM--PGIDNMAHIGGFVAGILLGFILLLRPQ-YGYVSGP 209
++I + V IG + P +D AHIGG ++G LL I YG + P
Sbjct: 154 VFRRQLIIFAALAVFNLIGNLNDPSVDIWAHIGGLISGSLLAIIFDFPTSVYGRIKQP 211
>gi|312085649|ref|XP_003144763.1| hypothetical protein LOAG_09187 [Loa loa]
gi|307760073|gb|EFO19307.1| hypothetical protein LOAG_09187 [Loa loa]
Length = 219
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 98/186 (52%), Gaps = 30/186 (16%)
Query: 27 QPRSENSLFGPSTATLKKLGGLSRNLVVYD----GEIYRFFSCMWLHANVIHLLTNSLAI 82
Q RS L+GP +++++++ E++R+F+ M++H +IHL N L
Sbjct: 14 QLRSGIELYGPVP---------QKSILIFNPYKTSEVWRYFTYMFIHIGIIHLAFNVLTQ 64
Query: 83 LFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASL 142
+ +G+ LE F RI L+Y+ G LL D + GASG ++ LL A +
Sbjct: 65 IILGIPLELVHKFWRIALVYLSGVLAGSLL-----DYAIDPRTYLAGASGGVYALLAAHI 119
Query: 143 SEIITNWT-----LYTNKCVSITMLI-----LVIGVNMAIGFMPGIDNMAHIGGFVAGIL 192
+E++ NWT LY + +++T+L+ LVI + I +++H+ GFVAG+L
Sbjct: 120 AELLINWTEMEFALY--RALALTVLVSSDVSLVIYHRYYLSTTDKISHVSHLAGFVAGVL 177
Query: 193 LGFILL 198
+G I+L
Sbjct: 178 MGTIVL 183
>gi|417761549|ref|ZP_12409558.1| peptidase, S54 family [Leptospira interrogans str. 2002000624]
gi|417776479|ref|ZP_12424317.1| peptidase, S54 family [Leptospira interrogans str. 2002000621]
gi|418671929|ref|ZP_13233275.1| peptidase, S54 family [Leptospira interrogans str. 2002000623]
gi|409942630|gb|EKN88238.1| peptidase, S54 family [Leptospira interrogans str. 2002000624]
gi|410573846|gb|EKQ36890.1| peptidase, S54 family [Leptospira interrogans str. 2002000621]
gi|410581051|gb|EKQ48866.1| peptidase, S54 family [Leptospira interrogans str. 2002000623]
Length = 514
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 6/165 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 350 FFYPDGPSLLEWGA-NRRIETLAGQWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 408
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 409 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 463
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
+K + M++ I + G GIDN AHIGG V+G L G IL
Sbjct: 464 DKKNVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF 508
>gi|385813424|ref|YP_005849817.1| S54 family peptidase [Lactobacillus helveticus H10]
gi|323466143|gb|ADX69830.1| S54 family peptidase [Lactobacillus helveticus H10]
Length = 226
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
L K+G ++ VV + +R F+ +LH V+HL++N++ I ++G +E G +R +
Sbjct: 38 VLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHVRFLV 97
Query: 101 LYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSI- 159
Y+L+G GG L S + +S GAS ALFGL GA ++ + N N +S
Sbjct: 98 TYLLAGIGGNLFSLAFSSDR----GLSAGASTALFGLFGAMVAIGLRN---LHNPMISFL 150
Query: 160 --TMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
L+L + +N+A+ F+PGID HIGG + G LL IL
Sbjct: 151 GRQALVLAL-INLALDIFVPGIDIWGHIGGLITGFLLAIIL 190
>gi|421186400|ref|ZP_15643793.1| membrane-associated serine protease [Oenococcus oeni AWRIB418]
gi|399967353|gb|EJO01835.1| membrane-associated serine protease [Oenococcus oeni AWRIB418]
Length = 241
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 103/198 (52%), Gaps = 13/198 (6%)
Query: 13 DRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANV 72
D +FH G FS R N GPS + LGG +L++ G+ YR F+ ++LH+++
Sbjct: 31 DAYLFHS-FGLFSLINRFIN---GPSIQSSILLGGQVSSLIL-KGQWYRLFTPIFLHSSL 85
Query: 73 IHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASG 132
+H+ +N ++ G +E+ FG + L+Y+LSG G LL+ + +SVGASG
Sbjct: 86 MHIFSNMFTLIIFGPFVEKLFGKTKYLLIYLLSGLWGNLLTLIFDPNPN---IVSVGASG 142
Query: 133 ALFGLLGA--SLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAG 190
ALFGL GA S++ N ++ + V L L + IG +D AHIGG ++G
Sbjct: 143 ALFGLFGAMISIAWFNRNNPIFKRQLVVFAALAL-FNLISNIG-DQSVDIWAHIGGLISG 200
Query: 191 ILLGFIL-LLRPQYGYVS 207
IL + QYG V
Sbjct: 201 ILTSLVCNFPSAQYGKVK 218
>gi|116630012|ref|YP_815184.1| membrane-associated serine protease [Lactobacillus gasseri ATCC
33323]
gi|311110357|ref|ZP_07711754.1| putative small hydrophobic molecule transporter protein
[Lactobacillus gasseri MV-22]
gi|116095594|gb|ABJ60746.1| Membrane-associated serine protease [Lactobacillus gasseri ATCC
33323]
gi|311065511|gb|EFQ45851.1| putative small hydrophobic molecule transporter protein
[Lactobacillus gasseri MV-22]
Length = 228
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 92/168 (54%), Gaps = 8/168 (4%)
Query: 32 NSLFGPSTA--TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
++ G ST TL +LG ++ LV + + +R F+ +LH +H+ +N++ I ++G +
Sbjct: 29 ETIMGGSTNINTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYVGQFM 88
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E G R +Y+LSG GG LLS + +S +S GAS ALFGL G ++ + N
Sbjct: 89 EPLLGHWRFLSVYLLSGIGGNLLSYAYGSDS----VVSAGASTALFGLFGVVIALYLANR 144
Query: 150 TLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFI 196
+ + L L I +N+A+ F ID + H+GG ++G LLG I
Sbjct: 145 AIPAINYLGKQALALAI-INLALDLFASHIDILGHLGGLISGFLLGII 191
>gi|418619999|ref|ZP_13182810.1| peptidase, S54 family [Staphylococcus hominis VCU122]
gi|374823562|gb|EHR87557.1| peptidase, S54 family [Staphylococcus hominis VCU122]
Length = 485
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH N H+L N L++ G +E G +
Sbjct: 181 SDIKLLDVGGLVHFNVVH-GEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVETIVGPYK 239
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y++SG G S S ISVGASGA+FGL+GA L+ + + T NK +
Sbjct: 240 MLGIYLISGLFGNFASL-----SFNISTISVGASGAIFGLIGAILTMMYLSKTF--NKKM 292
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
I +L++V+ + FM I+ MAH+GGF+ G L+ I
Sbjct: 293 IIQLLVVVLILIFVSLFMSNINLMAHLGGFIGGFLITLI 331
>gi|239827720|ref|YP_002950344.1| rhomboid family protein [Geobacillus sp. WCH70]
gi|239808013|gb|ACS25078.1| Rhomboid family protein [Geobacillus sp. WCH70]
Length = 389
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 82/146 (56%), Gaps = 7/146 (4%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ +GE +RFF+ ++LH +HLL N+ A+ ++G+ +E +G R +Y+++G
Sbjct: 216 GAKFNPLIQEGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWRFFFIYLIAG 275
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
F G L S L T +S GASGA+FGL GA L L+ + + +++I
Sbjct: 276 FFGTLGSFLF------TTSLSAGASGAIFGLFGALLYFGTVYRHLFFQTIGTNIIGLIII 329
Query: 167 GVNMAIGFMPGIDNMAHIGGFVAGIL 192
+ I +PGIDN HIGG + G L
Sbjct: 330 NLLFGI-MVPGIDNAGHIGGLIGGFL 354
>gi|260103121|ref|ZP_05753358.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260083068|gb|EEW67188.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 227
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 88/161 (54%), Gaps = 12/161 (7%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
L K+G ++ VV + +R F+ +LH V+HL++N++ I ++G +E G R +
Sbjct: 38 VLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHFRFLV 97
Query: 101 LYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSI- 159
Y+L+G GG L S + +S GAS ALFGL GA ++ + N N +S
Sbjct: 98 TYLLAGIGGNLFSLAFSSDR----GLSAGASTALFGLFGAMVAIGLRN---LHNPMISFL 150
Query: 160 --TMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
L+L + +N+A+ F+PGID HIGG + G LL IL
Sbjct: 151 GRQALVLAL-INLALDIFVPGIDIWGHIGGLITGFLLAIIL 190
>gi|418710371|ref|ZP_13271142.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418725109|ref|ZP_13283785.1| peptidase, S54 family [Leptospira interrogans str. UI 12621]
gi|409961491|gb|EKO25236.1| peptidase, S54 family [Leptospira interrogans str. UI 12621]
gi|410769307|gb|EKR44549.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
Length = 514
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 84/165 (50%), Gaps = 6/165 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 350 FFYPDGPSLLEWGA-NRRIETLAGQWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 408
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 409 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 463
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
+K + M++ I + G GIDN AHIGG V+G L G IL
Sbjct: 464 DKKNVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGALSGIILF 508
>gi|393248033|gb|EJD55540.1| rhomboid-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 325
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF + ++LHA +IH+L N A + ++E + G LLY F G+ CL +
Sbjct: 128 FRFITPIFLHAGIIHILLNMFAQFMLAAQIEREMGSGGFVLLY----FAAGIFGCLGANF 183
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+ SVGASGA+FG + ++ +W + L++ + + + +G++PG+D
Sbjct: 184 ALIG-SPSVGASGAIFGTIAVLWVDLFAHWQFEQQPKKKLVFLLIDLLIGIGLGYIPGVD 242
Query: 180 NMAHIGGFVAGILLGFILL 198
N AH+GGF G+L I L
Sbjct: 243 NFAHLGGFFMGLLFAIIFL 261
>gi|314936330|ref|ZP_07843677.1| rhomboid family protein [Staphylococcus hominis subsp. hominis C80]
gi|313654949|gb|EFS18694.1| rhomboid family protein [Staphylococcus hominis subsp. hominis C80]
Length = 485
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH N H+L N L++ G +E G +
Sbjct: 181 SDIKLLDVGGLVHFNVVH-GEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVETIVGPYK 239
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y++SG G S S ISVGASGA+FGL+GA L+ + + T NK +
Sbjct: 240 MLGIYLISGLFGNFASL-----SFNISTISVGASGAIFGLIGAILTMMYLSKTF--NKKM 292
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
I +L++V+ + FM I+ MAH+GGF+ G L+ I
Sbjct: 293 IIQLLVVVLILIFVSLFMSNINLMAHLGGFIGGFLITLI 331
>gi|228476169|ref|ZP_04060877.1| rhomboid family protein [Staphylococcus hominis SK119]
gi|228269992|gb|EEK11472.1| rhomboid family protein [Staphylococcus hominis SK119]
Length = 485
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 88/159 (55%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH N H+L N L++ G +E G +
Sbjct: 181 SDIKLLDVGGLVHFNVVH-GEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVETIVGPYK 239
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y++SG G S S ISVGASGA+FGL+GA L+ + + T NK +
Sbjct: 240 MLGIYLISGLFGNFASL-----SFNISTISVGASGAIFGLIGAILTMMYLSKTF--NKKM 292
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
I +L++V+ + FM I+ MAH+GGF+ G L+ I
Sbjct: 293 IIQLLVVVLILIFVSLFMSNINLMAHLGGFIGGFLITLI 331
>gi|256843575|ref|ZP_05549063.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256850051|ref|ZP_05555481.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|262047339|ref|ZP_06020296.1| membrane-associated serine protease [Lactobacillus crispatus
MV-3A-US]
gi|293381863|ref|ZP_06627832.1| peptidase, S54 (rhomboid) family protein [Lactobacillus crispatus
214-1]
gi|423319243|ref|ZP_17297119.1| hypothetical protein HMPREF9250_00309 [Lactobacillus crispatus
FB049-03]
gi|423320787|ref|ZP_17298659.1| hypothetical protein HMPREF9249_00659 [Lactobacillus crispatus
FB077-07]
gi|256614995|gb|EEU20196.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256713023|gb|EEU28014.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|260572313|gb|EEX28876.1| membrane-associated serine protease [Lactobacillus crispatus
MV-3A-US]
gi|290921584|gb|EFD98617.1| peptidase, S54 (rhomboid) family protein [Lactobacillus crispatus
214-1]
gi|405589376|gb|EKB62943.1| hypothetical protein HMPREF9250_00309 [Lactobacillus crispatus
FB049-03]
gi|405599039|gb|EKB72221.1| hypothetical protein HMPREF9249_00659 [Lactobacillus crispatus
FB077-07]
Length = 228
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 89/162 (54%), Gaps = 6/162 (3%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
+T L K+G ++ VV + +R F+ +LH ++HL++N++ I ++G +E G +
Sbjct: 36 ENTNVLMKMGAMNNFAVVAGHQWWRLFTAQFLHIGIMHLVSNAIIIYYMGQYMEPLMGHV 95
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
R + Y+L+G GG L+S + +S GAS ALFGL GA + + N
Sbjct: 96 RFLVTYLLAGVGGNLMSLAFSADR----GLSAGASTALFGLFGAMTAIGLRNLHNPMIAF 151
Query: 157 VSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
+ +L + +N+A+ F+PGID HIGG +AG LL IL
Sbjct: 152 LGRQAFVLAL-INLALDIFVPGIDIWGHIGGLIAGFLLAIIL 192
>gi|336430826|ref|ZP_08610764.1| hypothetical protein HMPREF0994_06770 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336016582|gb|EGN46362.1| hypothetical protein HMPREF0994_06770 [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 209
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 84/141 (59%), Gaps = 4/141 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E YR + M+LHA++ HL+ N + + F G +E+ G +R +L+ +SG G LL+ + +
Sbjct: 58 EYYRLVTAMFLHADISHLVNNMILLYFGGEIVEKTIGSVRYLVLFFVSGICGNLLTAIFE 117
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP- 176
+ S+GASGA+FGL+G L +IT +S+ +IL+I +++ GF
Sbjct: 118 VSTGMYFN-SIGASGAVFGLIGGLLYLVITRKGYAAQ--ISVRRMILMIALSLYSGFQSV 174
Query: 177 GIDNMAHIGGFVAGILLGFIL 197
++N AH+GG ++G L+ FIL
Sbjct: 175 RVNNAAHLGGLLSGFLITFIL 195
>gi|161507831|ref|YP_001577795.1| hypothetical protein lhv_1567 [Lactobacillus helveticus DPC 4571]
gi|160348820|gb|ABX27494.1| putative membrane protein [Lactobacillus helveticus DPC 4571]
Length = 226
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
L K+G ++ VV + +R F+ +LH V+HL++N++ I ++G +E G +R +
Sbjct: 38 VLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHVRFLV 97
Query: 101 LYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSI- 159
Y+L+G GG L S + +S GAS ALFGL GA ++ + N N +S
Sbjct: 98 TYLLAGIGGNLFSLAFSSDR----GLSAGASTALFGLFGAMVAIGLRN---LHNPMISFL 150
Query: 160 --TMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
L+L + +N+A+ F+PGID HIGG + G LL IL
Sbjct: 151 GRQALVLAL-INLALDIFVPGIDIWGHIGGLITGFLLAIIL 190
>gi|227544150|ref|ZP_03974199.1| S54 family peptidase [Lactobacillus reuteri CF48-3A]
gi|338202576|ref|YP_004648721.1| rhomboid family integral membrane protein [Lactobacillus reuteri
SD2112]
gi|154705524|gb|ABS84188.1| rhomboid family protein [Lactobacillus reuteri]
gi|227185866|gb|EEI65937.1| S54 family peptidase [Lactobacillus reuteri CF48-3A]
gi|336447816|gb|AEI56431.1| rhomboid family integral membrane protein [Lactobacillus reuteri
SD2112]
Length = 219
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 90/161 (55%), Gaps = 8/161 (4%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+T TL +G S L+ +GE +R S ++LH + HL+ NS+ +L+IG +EE FG R
Sbjct: 34 NTVTLLNMGARSTPLI-REGEWWRLVSPVFLHVGLSHLVVNSVTLLYIGRYIEEFFGHWR 92
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y +S F G L S + + +S GAS A+FGL GA L + + +
Sbjct: 93 MVIIYFVSAFFGNLTSAVFMPST-----VSAGASTAIFGLFGAFLMLGVCFHHNVIVRVL 147
Query: 158 SITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
S T L+ VI +N+ + F+ G+D + HIGG G + FI+
Sbjct: 148 SRTFLLFVI-INIVMDFFLSGVDLVGHIGGLFGGFFIAFIV 187
>gi|299538296|ref|ZP_07051581.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|424736343|ref|ZP_18164803.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
gi|298726498|gb|EFI67088.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|422949946|gb|EKU44319.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
Length = 207
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
PS TL G+ N ++ GE +R FS ++LHA +H+ N ++ G +LE+ G
Sbjct: 35 PSIGTLLWNYGIQANFLIQSGEWWRVFSAIFLHAGFMHVFFNMFSLYLFGPELEKIAGKA 94
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
R +Y++SG G + + + D S +L GASGA+FG+ GA + + YT +
Sbjct: 95 RFITIYLVSGIVGNMATYIFYDSSYASL----GASGAIFGIFGAFGALV-----YYTRRT 145
Query: 157 V----SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
+ + + I+VI V M P ++ AH+GG V G +LG + L
Sbjct: 146 MPMLRKLILPIIVISVIMTF-LQPNVNVFAHLGGLVTGFILGLVYL 190
>gi|358401351|gb|EHK50657.1| hypothetical protein TRIATDRAFT_52595 [Trichoderma atroviride IMI
206040]
Length = 510
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 94/177 (53%), Gaps = 6/177 (3%)
Query: 26 FQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFI 85
F P SE FG K G +++ + +RF +++HA +IH+ N L L I
Sbjct: 244 FCPLSELCGFGGDVPNPKFDGNANQSPA--PNQWFRFIIPIFMHAGLIHIGFNLLMQLTI 301
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
G ++E G +R L+Y+ +G G ++ + S GASG+LFG++ +L ++
Sbjct: 302 GKEMEIAIGSIRFFLVYMSAGIFGFVMGGNYAAPGI----ASTGASGSLFGIIALTLIDL 357
Query: 146 ITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ +W + + +I+ + ++ +G +PG+DN +HIGGF+ G++LG LL P
Sbjct: 358 LYSWKDRRSPVKDLLFIIIDMVISFVLGLLPGLDNFSHIGGFLMGLVLGICLLHSPN 414
>gi|355709783|gb|EHH31247.1| p100hRho [Macaca mulatta]
Length = 855
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/183 (27%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AH GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHTSGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>gi|345022776|ref|ZP_08786389.1| hypothetical protein OTW25_15910 [Ornithinibacillus scapharcae
TW25]
Length = 254
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 92/174 (52%), Gaps = 12/174 (6%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G+ + +++ GE +RF + ++LH ++H+L NS +++ G LE G +++++
Sbjct: 48 GVGHHYMIHQGEYWRFITPIFLHGGLMHMLFNSFSLVLFGPALERMIG----KSMFLIAY 103
Query: 107 FGGGLLSCLHQDESQQTLQIS-VGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G G+L+ + + VGASGA+FGL G + ++ +L ++ I +I +
Sbjct: 104 LGAGVLANITTFFINPSFMFPHVGASGAIFGLFGIYIFMVVFRKSLIDSQNAQIVTVIFL 163
Query: 166 IGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNH 219
IG+ M PGI+ AHI GF AG L+ ++L+R + P+ A Y H
Sbjct: 164 IGLIMTF-IRPGINQYAHILGFAAGFLIAPLVLVRAK------PFYASQYRRTH 210
>gi|348502086|ref|XP_003438600.1| PREDICTED: inactive rhomboid protein 1-like [Oreochromis niloticus]
Length = 865
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 15/161 (9%)
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R + ++LHA ++H L + L + + +E+ G+LRI ++Y+LSG G L S +
Sbjct: 665 RLWLSLFLHAGILHCLVSVLFQMTVLRDIEKLAGWLRISIIYMLSGITGNLASAIFL--- 721
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
+ VG +G+ FG+L E+ +W + + L+ + + G +P IDN
Sbjct: 722 --PYRAEVGPAGSQFGILACLFVELFQSWQILERPWRAFAKLLAISVFFFSFGLLPWIDN 779
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
AHI GFV+G L F L PYI+ G ++K
Sbjct: 780 FAHICGFVSGFFLSFAFL----------PYISFGRSDMYRK 810
>gi|73662516|ref|YP_301297.1| hypothetical protein SSP1207 [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|72495031|dbj|BAE18352.1| conserved hypothetical protein [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 485
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 93/162 (57%), Gaps = 10/162 (6%)
Query: 34 LFGPSTATLK--KLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEE 91
LF ++ LK +GGL VV+ GE YR + ++LH N H+L N L++ G +E
Sbjct: 175 LFLNRSSDLKLLDIGGLVHFNVVH-GEWYRLITSIFLHYNFEHILMNMLSLFIFGKIVES 233
Query: 92 DFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTL 151
G R+ ++Y+++G G S S T +SVGASGA+FGL+GA + +
Sbjct: 234 IVGHWRMFVIYLVAGLFGNFASL-----SFNTDTVSVGASGAIFGLIGAIFTFMYIG-KQ 287
Query: 152 YTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
+ K + +++LVI + +++ FM I+ +AHIGGF+ G+L+
Sbjct: 288 FNRKLIGQLLIVLVIMIGLSL-FMQNINIVAHIGGFIGGLLI 328
>gi|319654680|ref|ZP_08008759.1| hypothetical protein HMPREF1013_05381 [Bacillus sp. 2_A_57_CT2]
gi|317393596|gb|EFV74355.1| hypothetical protein HMPREF1013_05381 [Bacillus sp. 2_A_57_CT2]
Length = 241
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 103/205 (50%), Gaps = 12/205 (5%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
P+T +KL G+ NL + GE +R S + LH+ H+L NS +++ G LE G
Sbjct: 38 PNTLIFEKLAGV--NLYIVQGEYWRLLSPIILHSGFPHVLFNSFSLVLFGPVLERMLGKT 95
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
R LLY+ +G + + L + + I VGASGA+FGL G + I+ L + +
Sbjct: 96 RFILLYITAGAAANIATLLLEPLT----YIHVGASGAIFGLFGYFAAIIVFRKELLSREN 151
Query: 157 VSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYE 216
I + I +IGV M P I+ AH+ G +AG L+G L + + SG I PG
Sbjct: 152 SQIILTITIIGVIMTF-LQPNINVTAHLFGLLAGFLIGAASLAKGRTSSSSG-IIRPG-G 208
Query: 217 LNHKKPKYQ---CHQKLLWVISVVV 238
L +P + + +LW I +++
Sbjct: 209 LAGIRPSLKGVPASRLVLWGIIIIL 233
>gi|295693318|ref|YP_003601928.1| hypothetical protein LCRIS_01456 [Lactobacillus crispatus ST1]
gi|295031424|emb|CBL50903.1| Membrane protein [Lactobacillus crispatus ST1]
Length = 228
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
+T L K+G ++ VV + +R F +LH ++HL++N++ I ++G +E G +
Sbjct: 36 ENTNVLMKMGAMNNFAVVAGHQWWRLFMAQFLHIGIMHLVSNAIIIYYMGQYMEPLMGHV 95
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
R + Y+L+G GG L+S + +S GAS ALFGL GA + + N
Sbjct: 96 RFLVTYLLAGVGGNLMSLAFSADR----GLSAGASTALFGLFGAMTAIGLRNLHNPMIAF 151
Query: 157 VSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
+ +L + +N+A+ F+PGID HIGG +AG LL IL
Sbjct: 152 LGRQAFVLAL-INLALDIFVPGIDIWGHIGGLIAGFLLAIIL 192
>gi|351711230|gb|EHB14149.1| Rhomboid family member 1 [Heterocephalus glaber]
Length = 857
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 19/187 (10%)
Query: 58 EIYRFFSCMWLHA-NVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGQILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIF 712
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP 176
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 713 L-----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLP 767
Query: 177 GIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKKPKYQCHQKLL--WV 233
IDN AHI GF++G+ L F L PYI+ G ++L K+ + Q + +
Sbjct: 768 WIDNFAHISGFISGLFLSFAFL----------PYISFGKFDLYRKRCQIIIFQAVFLGLL 817
Query: 234 ISVVVLF 240
+V+LF
Sbjct: 818 AGLVILF 824
>gi|70726368|ref|YP_253282.1| hypothetical protein SH1367 [Staphylococcus haemolyticus JCSC1435]
gi|68447092|dbj|BAE04676.1| unnamed protein product [Staphylococcus haemolyticus JCSC1435]
Length = 485
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/159 (38%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L LGGL VV+ GE YR + M+LH N H+L N L++ G +E G LR
Sbjct: 181 SDVKLLDLGGLVHFNVVH-GEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVESIVGPLR 239
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +YV+SG G +S S +SVGASGA+FGL+G+ + + + T Y+ K +
Sbjct: 240 MLGIYVISGLLGNFISL-----SFNLHTVSVGASGAIFGLIGSIFAMMFVSKT-YSKKTI 293
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
MLI ++ + + FM I+ MAH+GGF+ G+L+ I
Sbjct: 294 G-QMLIALLVLIVLSLFMSNINIMAHLGGFIGGVLITLI 331
>gi|422874373|ref|ZP_16920858.1| rhomboid family protein [Clostridium perfringens F262]
gi|380304681|gb|EIA16968.1| rhomboid family protein [Clostridium perfringens F262]
Length = 342
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
+G N +++ GE YR + M+LH ++HLL N A+ +G +E +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SG + S + + VGASGA+FGLLGA+L N K + +T +I+
Sbjct: 249 SGIVASIFSLYF------SPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKAL-VTNIIV 300
Query: 165 VIGVNMAIGF-MPGIDNMAHIGGFVAGILLG 194
+I +N+ IG M ID AH GGF+AG +LG
Sbjct: 301 IILLNVFIGLSMSNIDISAHFGGFIAGAILG 331
>gi|456824612|gb|EMF73038.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 226
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 62 FFYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 120
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 121 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 175
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN AHIGG V+G L G IL Q+G
Sbjct: 176 DKKNVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 223
>gi|315658175|ref|ZP_07911047.1| rhomboid family protein [Staphylococcus lugdunensis M23590]
gi|315496504|gb|EFU84827.1| rhomboid family protein [Staphylococcus lugdunensis M23590]
Length = 489
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 96/159 (60%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR + M+LH N H+L N L++ G +E G ++
Sbjct: 185 SNIKLLEMGGLVHFNVVH-GEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVEAIIGPMK 243
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +LY++SG G LS S T +S GASGA+FGL+GA ++ +I + +Y+ K +
Sbjct: 244 MLILYIISGLFGNFLSL-----SFNTDTVSAGASGAIFGLIGAIIAMMIIS-KVYSRKMI 297
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI + ++ + ++ MAH+GGF++G+LL +I
Sbjct: 298 GQLLIALVILIGFSL-LLSNVNIMAHLGGFISGLLLIYI 335
>gi|227877719|ref|ZP_03995755.1| S54 family peptidase [Lactobacillus crispatus JV-V01]
gi|312984383|ref|ZP_07791722.1| putative small hydrophobic molecule transporter protein
[Lactobacillus crispatus CTV-05]
gi|227862707|gb|EEJ70190.1| S54 family peptidase [Lactobacillus crispatus JV-V01]
gi|310894227|gb|EFQ43310.1| putative small hydrophobic molecule transporter protein
[Lactobacillus crispatus CTV-05]
Length = 228
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
+T L K+G ++ VV + +R F +LH ++HL++N++ I ++G +E G +
Sbjct: 36 ENTNVLMKMGAMNNFAVVAGHQWWRLFMAQFLHIGIMHLVSNAIIIYYMGQYMEPLMGHV 95
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
R + Y+L+G GG L+S + +S GAS ALFGL GA + + N
Sbjct: 96 RFLVTYLLAGVGGNLMSLAFSADR----GLSAGASTALFGLFGAMTAIGLRNLHNPMIAF 151
Query: 157 VSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
+ +L + +N+A+ F+PGID HIGG +AG LL IL
Sbjct: 152 LGRQAFVLAL-INLALDIFVPGIDIWGHIGGLIAGFLLAIIL 192
>gi|110799144|ref|YP_696141.1| rhomboid family protein [Clostridium perfringens ATCC 13124]
gi|168206356|ref|ZP_02632361.1| rhomboid family protein [Clostridium perfringens E str. JGS1987]
gi|169347261|ref|ZP_02866200.1| rhomboid family protein [Clostridium perfringens C str. JGS1495]
gi|110673791|gb|ABG82778.1| rhomboid family protein [Clostridium perfringens ATCC 13124]
gi|169296657|gb|EDS78788.1| rhomboid family protein [Clostridium perfringens C str. JGS1495]
gi|170662212|gb|EDT14895.1| rhomboid family protein [Clostridium perfringens E str. JGS1987]
Length = 342
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
+G N +++ GE YR + M+LH ++HLL N A+ +G +E +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SG + S + + VGASGA+FGLLGA+L N K + +T +I+
Sbjct: 249 SGIVASIFSLYF------SPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKAL-VTNIIV 300
Query: 165 VIGVNMAIGF-MPGIDNMAHIGGFVAGILLG 194
+I +N+ IG M ID AH GGF+AG +LG
Sbjct: 301 IILLNVFIGLSMSNIDISAHFGGFIAGAILG 331
>gi|168214465|ref|ZP_02640090.1| rhomboid family protein [Clostridium perfringens CPE str. F4969]
gi|168216839|ref|ZP_02642464.1| rhomboid family protein [Clostridium perfringens NCTC 8239]
gi|422346116|ref|ZP_16427030.1| hypothetical protein HMPREF9476_01103 [Clostridium perfringens
WAL-14572]
gi|170714094|gb|EDT26276.1| rhomboid family protein [Clostridium perfringens CPE str. F4969]
gi|182381088|gb|EDT78567.1| rhomboid family protein [Clostridium perfringens NCTC 8239]
gi|373226738|gb|EHP49060.1| hypothetical protein HMPREF9476_01103 [Clostridium perfringens
WAL-14572]
Length = 342
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 83/151 (54%), Gaps = 9/151 (5%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
+G N +++ GE YR + M+LH ++HLL N A+ +G +E +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SG + S + + VGASGA+FGLLGA+L N K + +T +I+
Sbjct: 249 SGIVASIFSLYF------SPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKAL-VTNIIV 300
Query: 165 VIGVNMAIGF-MPGIDNMAHIGGFVAGILLG 194
+I +N+ IG M ID AH GGF+AG +LG
Sbjct: 301 IILLNVFIGLSMSNIDISAHFGGFIAGAILG 331
>gi|89099189|ref|ZP_01172067.1| hypothetical protein B14911_07900 [Bacillus sp. NRRL B-14911]
gi|89086035|gb|EAR65158.1| hypothetical protein B14911_07900 [Bacillus sp. NRRL B-14911]
Length = 522
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 79/138 (57%), Gaps = 15/138 (10%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ +GE +RFF+ + LH ++HL+ N+LA+ ++G +E +G R +Y+L+G
Sbjct: 221 GAKYNPLILEGEWWRFFTPIVLHIGLLHLIMNTLALYYLGTAVERIYGSTRFLFIYILAG 280
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM---LI 163
F G L S L +S GASGA+FG GA L + L K TM ++
Sbjct: 281 FMGALASFLFNS------SVSAGASGAIFGCFGALLY-----FGLIQPKLFFRTMGLNIL 329
Query: 164 LVIGVNMAIGF-MPGIDN 180
+V+G+N+ GF +PGIDN
Sbjct: 330 IVLGINLLFGFSVPGIDN 347
>gi|403514649|ref|YP_006655469.1| S54 family peptidase [Lactobacillus helveticus R0052]
gi|403080087|gb|AFR21665.1| S54 family peptidase [Lactobacillus helveticus R0052]
Length = 226
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
L K+G ++ VV + +R F+ +LH V+HL++N++ I ++G +E G +R +
Sbjct: 38 VLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHVRFLV 97
Query: 101 LYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSI- 159
Y+L+G GG L S + +S GAS ALFGL GA ++ + N N +S
Sbjct: 98 TYLLAGIGGNLFSLAFSSDR----GLSAGASTALFGLFGAMVAIGLRN---LHNPMISFL 150
Query: 160 --TMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
L+L + +N+A+ F+PGID HIGG + G LL IL
Sbjct: 151 GRQALVLAL-INLALDIFVPGIDIWGHIGGLITGFLLAIIL 190
>gi|388506462|gb|AFK41297.1| unknown [Lotus japonicus]
Length = 136
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 74/98 (75%), Gaps = 3/98 (3%)
Query: 142 LSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
L+E+ITNWT+Y+NK +++ L+++I +N+AIG +P +DN AHIGGF+ G+LLGFILL RP
Sbjct: 2 LAELITNWTIYSNKVMALLTLLVIIVINLAIGILPHVDNFAHIGGFLVGLLLGFILLPRP 61
Query: 202 QYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVVVL 239
Q+G++ ++ G L K KY+ +Q +L + S+++L
Sbjct: 62 QFGWLEQRHLPAGVRL---KSKYKAYQYVLLIASLILL 96
>gi|336053788|ref|YP_004562075.1| hypothetical protein WANG_0278 [Lactobacillus kefiranofaciens ZW3]
gi|333957165|gb|AEG39973.1| possible membrane protein [Lactobacillus kefiranofaciens ZW3]
Length = 226
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 88/162 (54%), Gaps = 6/162 (3%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
+T L K+G +S VV + +R F+ +LH V+HL++N++ I ++G+ +E G
Sbjct: 34 ENTNVLMKMGAMSNFAVVVGQQWWRLFTAQFLHIGVMHLVSNAVIIYYMGLYMEPLMGHW 93
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
R Y+L+G GG LLS + +S GAS ALFGL GA + + N
Sbjct: 94 RFLATYLLAGIGGNLLSLAFGSDR----GLSAGASTALFGLFGAMTAIGLRNMRNPMISY 149
Query: 157 VSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
+ +L + +N+A+ F+PGID H+GG ++G LL I+
Sbjct: 150 LGRQAFVLAL-INLALDLFVPGIDIWGHLGGLISGFLLAIIM 190
>gi|298245593|ref|ZP_06969399.1| Rhomboid family protein [Ktedonobacter racemifer DSM 44963]
gi|297553074|gb|EFH86939.1| Rhomboid family protein [Ktedonobacter racemifer DSM 44963]
Length = 294
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
S QP + SL T L G +V E +RF + M+LHAN++HL N L +L
Sbjct: 82 SIQPADDASL----TQVLIDYGAKYNPAIVQQHEYWRFLTPMFLHANLLHLGLNMLNLLM 137
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G+ LE G R LY+++G L S E ++S+GASGA+FGL+G
Sbjct: 138 LGIFLERLLGHTRYLFLYIITGIISILASFYFAPE-----EVSLGASGAIFGLVGVFSIF 192
Query: 145 IITNWTLYT-NKCVSITMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
+IT+ + SI LI++IG+N+ +GFM +DN AH GG ++G LLG L P
Sbjct: 193 VITHRRAFPFGGLFSILYLIVIIGINLGVGFMIANVDNYAHFGGLISGCLLG--LCYSPL 250
Query: 203 YGYVSGPYIAPGYELNHKKP 222
Y S + + L + P
Sbjct: 251 YRSSSPYTVVDRHSLTKRWP 270
>gi|171692185|ref|XP_001911017.1| hypothetical protein [Podospora anserina S mat+]
gi|170946041|emb|CAP72842.1| unnamed protein product [Podospora anserina S mat+]
Length = 523
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 4/142 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF ++LHA +IH+ N L L +G +E+ G +R ++Y+ +G G ++
Sbjct: 255 FRFIVPIFLHAGLIHIGFNMLLQLTLGRDMEKHIGSIRFFIVYMSAGIFGFVMG----GN 310
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
T S GASG+LFG++ + +++ +W N + L + I ++ +G +PG+D
Sbjct: 311 FAATGIASTGASGSLFGIIALTFLDLLYSWKDRVNPTKDLMYLFIDIIISFVLGLLPGLD 370
Query: 180 NMAHIGGFVAGILLGFILLLRP 201
N +HIGGF+ G+ LG +L P
Sbjct: 371 NFSHIGGFLMGLALGICILHSP 392
>gi|418670564|ref|ZP_13231935.1| peptidase, S54 family [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|421121687|ref|ZP_15581980.1| peptidase, S54 family [Leptospira interrogans str. Brem 329]
gi|410345538|gb|EKO96634.1| peptidase, S54 family [Leptospira interrogans str. Brem 329]
gi|410753946|gb|EKR15604.1| peptidase, S54 family [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
Length = 226
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 62 FFYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 120
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 121 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 175
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN AHIGG V+G L G IL Q+G
Sbjct: 176 DKKNVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 223
>gi|88195357|ref|YP_500161.1| rhomboid family protein, partial [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|87202915|gb|ABD30725.1| rhomboid family protein [Staphylococcus aureus subsp. aureus NCTC
8325]
Length = 336
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|453087192|gb|EMF15233.1| rhomboid-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 503
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 79/144 (54%), Gaps = 4/144 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF +++HA +IH+ N L + +G +E G +R +LY SG G +L
Sbjct: 249 QWWRFIVPIFIHAGIIHIGFNLLLQVTLGRDVELLIGSVRFAILYFASGIFGFILG---- 304
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
T S GASG+LFG+L +L +++ W + + +I+ I + +G +PG
Sbjct: 305 GNFAATGIASCGASGSLFGILAITLLDLLYTWKDRRSPIKDLMFIIIDILIAFVLGLLPG 364
Query: 178 IDNMAHIGGFVAGILLGFILLLRP 201
+DN +HIGGF+ G++LG LL P
Sbjct: 365 LDNFSHIGGFLMGLVLGVCLLRSP 388
>gi|261343422|ref|ZP_05971067.1| rhomboid protease AarA [Providencia rustigianii DSM 4541]
gi|282568565|gb|EFB74100.1| rhomboid protease AarA [Providencia rustigianii DSM 4541]
Length = 672
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 88/179 (49%), Gaps = 29/179 (16%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC-- 114
G+ +R+ M LH+ +HL N+LA+L IG++ E FG R +Y+ +G G +S
Sbjct: 68 GDWWRYPISMVLHSGWVHLGLNTLALLVIGIECERAFGKFRYLAIYLFAGIVGAFVSAAW 127
Query: 115 --------------------LHQDESQQTLQISVGASGALFGLLGASLSEIIT-----NW 149
L Q+++ + +S+GASGA+ GL AS+ E++
Sbjct: 128 QYQEALNSVMRRFDMMSWGSLLQNDNTVYITVSLGASGAIMGLAAASVIELLKRLSKPEL 187
Query: 150 TLYTNKCVSITM--LILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYV 206
T + + +I +I + + G G+DN AHIGG VAG ++GF +L P Y+
Sbjct: 188 TKEARDALKRPLYNIIAMIALTLINGLQSGVDNAAHIGGAVAGAVIGFTFVLIPAKKYL 246
>gi|418576075|ref|ZP_13140221.1| hypothetical protein SSME_12770 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
gi|379325137|gb|EHY92269.1| hypothetical protein SSME_12770 [Staphylococcus saprophyticus
subsp. saprophyticus KACC 16562]
Length = 489
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 93/162 (57%), Gaps = 10/162 (6%)
Query: 34 LFGPSTATLK--KLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEE 91
LF ++ LK +GGL VV+ GE YR + ++LH N H+L N L++ G +E
Sbjct: 179 LFLNRSSDLKLLDVGGLVHFNVVH-GEWYRLITSIFLHYNFEHILMNMLSLFIFGKIVES 237
Query: 92 DFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTL 151
G R+ ++Y+++G G S S T +SVGASGA+FGL+GA + +
Sbjct: 238 IVGHWRMFVIYLVAGLFGNFASL-----SFNTDTVSVGASGAIFGLIGAIFTFMYIG-KQ 291
Query: 152 YTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
+ K + +++LVI + +++ FM I+ +AHIGGF+ G+L+
Sbjct: 292 FNRKLIGQLLIVLVIMIGLSL-FMQNINIVAHIGGFIGGLLI 332
>gi|260587072|ref|ZP_05852985.1| rhomboid protease GluP [Blautia hansenii DSM 20583]
gi|331082843|ref|ZP_08331965.1| hypothetical protein HMPREF0992_00889 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542562|gb|EEX23131.1| rhomboid protease GluP [Blautia hansenii DSM 20583]
gi|330400172|gb|EGG79821.1| hypothetical protein HMPREF0992_00889 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 220
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 4/164 (2%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
T + + GG V+ E YR S M+LH + HL N L +LF+G LE + G ++
Sbjct: 54 DTYHILRWGGCYTPAVLQSHEYYRLISSMFLHFGIQHLGNNMLVLLFLGDCLERNIGKIK 113
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
L+Y L G G +LS + ++ + IS GASGA+F ++GA + +I N N
Sbjct: 114 YLLIYFLGGIGANVLSIYLEIKNGKYF-ISAGASGAVFAVIGALIYIVIANRGRIEN--F 170
Query: 158 SITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLR 200
+ LI++ G+++ G G+DN AH GG ++G +L + R
Sbjct: 171 TTRQLIVMAGLSLYFGMTSTGVDNAAHFGGLISGFILAVLCYRR 214
>gi|406862658|gb|EKD15708.1| rhomboid family protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 570
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 98/194 (50%), Gaps = 25/194 (12%)
Query: 28 PRSENSLF-GPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIG 86
P S+N ++ G +T L ++ + +RF ++LHA +IH+ N L L +G
Sbjct: 272 PDSQNPVYPGSTTDALNEIANQPN-------QWFRFIVPIFLHAGLIHIGFNMLLQLTLG 324
Query: 87 VKLEEDFGFLRIGLLYVLSG-FG---GGLLSCLHQDESQQTLQISVGASGALFGLLGASL 142
+E G +R L+Y SG FG GG + + S GASGALFG++ +L
Sbjct: 325 KDMEIAIGPIRYFLVYFSSGIFGFVLGGNFAAVGI--------ASTGASGALFGVIALNL 376
Query: 143 SEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL---- 198
+++ W+ + ++L ++ +G +PG+DN +HIGGF+ G+ LG +L
Sbjct: 377 LDLLYTWSERRSPWKDFAFIMLDCVISFGLGLLPGLDNFSHIGGFLMGLALGICILHSPN 436
Query: 199 -LRPQYGYVSGPYI 211
LR + G PY+
Sbjct: 437 ALRKRIGQDDPPYV 450
>gi|330997596|ref|ZP_08321442.1| peptidase, S54 family [Paraprevotella xylaniphila YIT 11841]
gi|329570307|gb|EGG52042.1| peptidase, S54 family [Paraprevotella xylaniphila YIT 11841]
Length = 478
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 81/146 (55%), Gaps = 16/146 (10%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL- 115
G+ +R ++C ++H+ +IHL+ N A+LF+G+ LE G LR+ ++Y L+G +
Sbjct: 104 GDYWRVWTCNFVHSGLIHLIMNVYALLFVGLFLEPMLGSLRVVMVYSLAGLYSSVAGLFC 163
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM 175
H D ISVGASGA+FGL GA + ++ Y + +L++ IG + +
Sbjct: 164 HAD------WISVGASGAIFGLYGALFARLL----FYKGQSSWRKILLIAIGGFILYNLL 213
Query: 176 PGI-----DNMAHIGGFVAGILLGFI 196
GI DN AH GG VAG LLG +
Sbjct: 214 YGIGDNNVDNAAHTGGLVAGFLLGVV 239
>gi|456972143|gb|EMG12595.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 226
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 87/171 (50%), Gaps = 9/171 (5%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
F P +L + G +R + G+ +R + +++HA HL N ++ + +E
Sbjct: 62 FFYPDGPSLLEWGA-NRRIETLAGQWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEPIL 120
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G +R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ +
Sbjct: 121 GRIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRD 175
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+K + M++ I + G GIDN AHIGG V+G L G IL Q+G
Sbjct: 176 DKKNVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGALSGIILF---QFG 223
>gi|357448921|ref|XP_003594736.1| Rhomboid family member [Medicago truncatula]
gi|355483784|gb|AES64987.1| Rhomboid family member [Medicago truncatula]
Length = 190
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 73/138 (52%), Gaps = 13/138 (9%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIY 60
MY NNCP ++ C+ L +FSF+ +N L L K+G + IY
Sbjct: 66 MYENNCP-SIAPHSCL-ASLLDKFSFESIKQNPL-------LVKMGAMYFTKSDRLQHIY 116
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R F+ +WLHA + LL N IL+ G+ LE +G ++I +L+ +SG GG L S L +
Sbjct: 117 RLFTSLWLHAGAVDLLINMFNILYYGISLERKYGSVQIAILHNISGIGGSLFSALFIIPA 176
Query: 121 QQTLQISVGASGALFGLL 138
+SVGASGA+ L+
Sbjct: 177 ----NVSVGASGAIMSLV 190
>gi|82751152|ref|YP_416893.1| hypothetical protein SAB1421c [Staphylococcus aureus RF122]
gi|82656683|emb|CAI81110.1| probable membrane protein [Staphylococcus aureus RF122]
Length = 487
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|331268929|ref|YP_004395421.1| rhomboid family membrane protein [Clostridium botulinum BKT015925]
gi|329125479|gb|AEB75424.1| rhomboid family membrane protein [Clostridium botulinum BKT015925]
Length = 335
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 85/152 (55%), Gaps = 9/152 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ G+ YR +CM+LH ++HL+ N A+ +G +E+ +G ++ ++Y++ G
Sbjct: 185 GAKENTLIASGQYYRLITCMFLHGGLMHLILNMYALKALGPMIEKSYGKMKYVIIYLVGG 244
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
+ S + + +S+GASGA+F LLGA L I ++ I ++ VI
Sbjct: 245 LISSISSYIFSN------GVSIGASGAIFSLLGAILVLTIKMRSVAGKDV--IKNVVSVI 296
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGILLGFIL 197
+N+ IG +P IDN AHIGG + G+ L IL
Sbjct: 297 VINIFIGLAIPNIDNFAHIGGLLGGVFLSIIL 328
>gi|291438500|ref|ZP_06577890.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
gi|291341395|gb|EFE68351.1| conserved hypothetical protein [Streptomyces ghanaensis ATCC 14672]
Length = 296
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V DGE YR F+ M+ H + H+ N L + ++G LE+ G R LY++SG G L+
Sbjct: 127 VADGEWYRLFTSMFTHEAIWHIAFNMLGLWWLGGPLEQALGRARYLALYLISGLAGSALT 186
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L + TL GASGA+FGL GA L + +I ++ +N+
Sbjct: 187 YLLASGTTATL----GASGAIFGLFGAMA-------VLMRRLDYDMRPIIALLVINLIFT 235
Query: 174 FMPG--IDNMAHIGGFVAGILLGFILLLRPQ 202
F PG I AHIGG VAG+++G+ ++ P+
Sbjct: 236 FSPGFNIAWQAHIGGLVAGVVIGYAMVHAPR 266
>gi|417643203|ref|ZP_12293263.1| peptidase, S54 family [Staphylococcus warneri VCU121]
gi|330685982|gb|EGG97605.1| peptidase, S54 family [Staphylococcus epidermidis VCU121]
Length = 405
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH N H+L N L++ G +E G +
Sbjct: 182 SDIKLLDVGGLVHFNVVH-GEWYRLVTSMFLHFNFEHILMNMLSLYIFGKIVESVLGSWK 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y+ +G G +S S T ISVGASGA+FGL+G+ + + + T + + +
Sbjct: 241 MLAIYLFAGIFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAILYLSKT-FDKRVI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI + +++ FM I+ MAH+GGF+ G+L+ I
Sbjct: 295 GQLLIALVILIGLSL-FMSNINVMAHLGGFIGGLLITLI 332
>gi|340370736|ref|XP_003383902.1| PREDICTED: inactive rhomboid protein 1-like [Amphimedon
queenslandica]
Length = 399
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 83/151 (54%), Gaps = 5/151 (3%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +R +++H VI ++ + L++G+K+E GFLRI L+Y +SG GG L+S +
Sbjct: 190 QTWRLVLSLFIHLGVIDVIVIGIIQLYLGIKIERTAGFLRIALIYFISGIGGNLVSAIFI 249
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
Q++ GAS A+FGL + E+ W + + + L+ ++ V +AIG +P
Sbjct: 250 -----PYQVTGGASAAVFGLASVLIVELFQVWQIIDKAWLELLKLLSIMLVLLAIGTLPF 304
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
IDN+A+IGG + G+ I L +G V
Sbjct: 305 IDNLANIGGIIFGVPAAIIFLPYITFGKVDA 335
>gi|451821413|ref|YP_007457614.1| rhomboid protease GluP [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451787392|gb|AGF58360.1| rhomboid protease GluP [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 332
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
SLF T L G N ++ G+++R +C +LH+ +IH+ N ++ IG ++E+
Sbjct: 164 SLFDIDTKVLLDYGA-KYNALIDKGQVWRLLTCAFLHSGLIHIACNMYSLYIIGPQIEQI 222
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
+G L+ ++Y++S LS +S ISVGASGA+FGL+GA L+
Sbjct: 223 YGTLKYLIIYIVSSITASALSYFMSPDS-----ISVGASGAIFGLMGALLAFAFIERNKI 277
Query: 153 TNKCVSITMLILVIGVNMAIGF-MPGIDNMAHI 184
K +S M +++I N+ IG + IDN AHI
Sbjct: 278 QKKYMSSLMQVIII--NLFIGLSISNIDNFAHI 308
>gi|418309099|ref|ZP_12920674.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21194]
gi|365235250|gb|EHM76170.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21194]
Length = 364
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|422746158|ref|ZP_16800091.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320140566|gb|EFW32420.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA131]
Length = 487
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|418430534|ref|ZP_13003445.1| hypothetical protein MQE_01426 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387718274|gb|EIK06258.1| hypothetical protein MQE_01426 [Staphylococcus aureus subsp. aureus
VRS3a]
Length = 487
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|379014757|ref|YP_005290993.1| putative rhomboid family protein, truncated, partial
[Staphylococcus aureus subsp. aureus VC40]
gi|374363454|gb|AEZ37559.1| putative rhomboid family protein, truncated [Staphylococcus aureus
subsp. aureus VC40]
Length = 423
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|417649370|ref|ZP_12299174.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21189]
gi|440735000|ref|ZP_20914611.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus DSM
20231]
gi|329728476|gb|EGG64913.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21189]
gi|436431095|gb|ELP28449.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus DSM
20231]
Length = 487
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|258443587|ref|ZP_05691926.1| rhomboid family protein [Staphylococcus aureus A8115]
gi|282893050|ref|ZP_06301284.1| peptidase [Staphylococcus aureus A8117]
gi|443635576|ref|ZP_21119704.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21236]
gi|257850993|gb|EEV74936.1| rhomboid family protein [Staphylococcus aureus A8115]
gi|282764368|gb|EFC04494.1| peptidase [Staphylococcus aureus A8117]
gi|443409217|gb|ELS67715.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21236]
Length = 487
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|221140031|ref|ZP_03564524.1| peptidase [Staphylococcus aureus subsp. aureus str. JKD6009]
gi|384862151|ref|YP_005744871.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|302751380|gb|ADL65557.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. JKD6008]
Length = 487
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|386831159|ref|YP_006237813.1| hypothetical protein SAEMRSA15_14690 [Staphylococcus aureus subsp.
aureus HO 5096 0412]
gi|417798923|ref|ZP_12446077.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21310]
gi|418654972|ref|ZP_13216857.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-105]
gi|334275085|gb|EGL93386.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21310]
gi|375038535|gb|EHS31510.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-105]
gi|385196551|emb|CCG16180.1| putative membrane protein [Staphylococcus aureus subsp. aureus HO
5096 0412]
Length = 487
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|418313141|ref|ZP_12924635.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21334]
gi|365236412|gb|EHM77301.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21334]
Length = 487
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|367024201|ref|XP_003661385.1| hypothetical protein MYCTH_2300708 [Myceliophthora thermophila ATCC
42464]
gi|347008653|gb|AEO56140.1| hypothetical protein MYCTH_2300708 [Myceliophthora thermophila ATCC
42464]
Length = 551
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF +++HA VIH+ N L L + +E+ G +R L+Y+ +G G ++ +
Sbjct: 314 FRFIIPIFMHAGVIHIGFNMLLQLTLARDMEKSIGSIRFFLVYMSAGIFGFVMGGNYAGN 373
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+ S GASG+LFG++ +L +++ +W + + ++L + ++ +G +PG+D
Sbjct: 374 AVA----STGASGSLFGIIALTLLDLLYSWKDRVSPVKDLVFILLDVIISFVLGLLPGLD 429
Query: 180 NMAHIGGFVAGILLGFILLLRPQ 202
N +HIGGF+ G+ LG +L P
Sbjct: 430 NFSHIGGFLMGLALGICVLHSPN 452
>gi|417897083|ref|ZP_12541026.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21235]
gi|341840349|gb|EGS81869.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21235]
Length = 372
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|289550680|ref|YP_003471584.1| membrane peptidase [Staphylococcus lugdunensis HKU09-01]
gi|385784306|ref|YP_005760479.1| rhomboid family protein [Staphylococcus lugdunensis N920143]
gi|418413982|ref|ZP_12987198.1| hypothetical protein HMPREF9308_00363 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
gi|289180212|gb|ADC87457.1| Putative membrane peptidase [Staphylococcus lugdunensis HKU09-01]
gi|339894562|emb|CCB53844.1| rhomboid family protein [Staphylococcus lugdunensis N920143]
gi|410877620|gb|EKS25512.1| hypothetical protein HMPREF9308_00363 [Staphylococcus lugdunensis
ACS-027-V-Sch2]
Length = 485
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 95/159 (59%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH N H+L N L++ G +E G ++
Sbjct: 181 SNIKLLDMGGLVHFNVVH-GEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVEAIIGPMK 239
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +LY++SG G LS S T +S GASGA+FGL+GA ++ +I + +Y+ K +
Sbjct: 240 MLILYIISGLFGNFLSL-----SFNTDTVSAGASGAIFGLIGAIIAMMIIS-KVYSRKMI 293
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI + ++ + ++ MAH+GGF++G+LL +I
Sbjct: 294 GQLLIALVILIGFSL-LLSNVNIMAHLGGFISGLLLIYI 331
>gi|386729250|ref|YP_006195633.1| integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus 71193]
gi|387602889|ref|YP_005734410.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ST398]
gi|404478900|ref|YP_006710330.1| hypothetical protein C248_1592 [Staphylococcus aureus 08BA02176]
gi|418309989|ref|ZP_12921539.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21331]
gi|418978272|ref|ZP_13526073.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus DR10]
gi|283470827|emb|CAQ50038.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ST398]
gi|365237446|gb|EHM78292.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21331]
gi|379993888|gb|EIA15333.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus DR10]
gi|384230543|gb|AFH69790.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
subsp. aureus 71193]
gi|404440389|gb|AFR73582.1| putative membrane protein [Staphylococcus aureus 08BA02176]
Length = 487
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|340522831|gb|EGR53064.1| predicted protein [Trichoderma reesei QM6a]
Length = 515
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 94/176 (53%), Gaps = 6/176 (3%)
Query: 26 FQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFI 85
F P SE FG K G ++ + + +RF +++HA +IH+ N L L I
Sbjct: 249 FCPLSELCGFGGDVPNPKFDGDANQTPI--PNQWFRFIIPIFMHAGLIHIGFNLLMQLTI 306
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
G ++E G +R L+Y+ +G G ++ + S GASG+LFG++ +L ++
Sbjct: 307 GKEMEIAIGSIRFFLVYMSAGIFGFVMGGNYAAPGI----ASTGASGSLFGIIALTLLDL 362
Query: 146 ITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
+ +W + + +I+ + ++ +G +PG+DN +HIGGF+ G++LG +L P
Sbjct: 363 LYSWKDRRSPVKDLLFIIIDMVISFVLGLLPGLDNFSHIGGFLMGLVLGICVLHSP 418
>gi|253733201|ref|ZP_04867366.1| S54 family peptidase [Staphylococcus aureus subsp. aureus TCH130]
gi|417897863|ref|ZP_12541789.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21259]
gi|253728741|gb|EES97470.1| S54 family peptidase [Staphylococcus aureus subsp. aureus TCH130]
gi|341849365|gb|EGS90508.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21259]
Length = 487
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|408679359|ref|YP_006879186.1| putative membrane protein [Streptomyces venezuelae ATCC 10712]
gi|328883688|emb|CCA56927.1| putative membrane protein [Streptomyces venezuelae ATCC 10712]
Length = 294
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V DGE YR + LH V H+L N L + IG +E + G +R L +LSG G +L+
Sbjct: 126 VADGEWYRLLTSTVLHQEVWHILFNVLGLWVIGGIVEPELGRIRYAALCLLSGLSGSVLA 185
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
+ + +Q +L GASG ++GL+GA + L + + +IL + +++ I
Sbjct: 186 YVVAEPNQPSL----GASGVVYGLIGAWV-------VLARRRRHDMRPVILFVALSLLIT 234
Query: 174 FM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
F PGI AH+GG VAG+L+ + L+ P+
Sbjct: 235 FTRPGISWEAHVGGLVAGVLVTYALVHAPR 264
>gi|15924539|ref|NP_372073.1| hypothetical protein SAV1549 [Staphylococcus aureus subsp. aureus
Mu50]
gi|15927129|ref|NP_374662.1| hypothetical protein SA1379 [Staphylococcus aureus subsp. aureus
N315]
gi|57651942|ref|YP_186446.1| rhomboid family protein [Staphylococcus aureus subsp. aureus COL]
gi|87160848|ref|YP_494204.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|151221664|ref|YP_001332486.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156979867|ref|YP_001442126.1| hypothetical protein SAHV_1536 [Staphylococcus aureus subsp. aureus
Mu3]
gi|161509778|ref|YP_001575437.1| peptidase [Staphylococcus aureus subsp. aureus USA300_TCH1516]
gi|253314920|ref|ZP_04838133.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255006335|ref|ZP_05144936.2| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257425674|ref|ZP_05602098.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257428335|ref|ZP_05604733.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257430972|ref|ZP_05607352.1| peptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257433660|ref|ZP_05610018.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
E1410]
gi|257436574|ref|ZP_05612618.1| peptidase [Staphylococcus aureus subsp. aureus M876]
gi|258437381|ref|ZP_05689365.1| peptidase [Staphylococcus aureus A9299]
gi|258450622|ref|ZP_05698684.1| peptidase [Staphylococcus aureus A5948]
gi|262049127|ref|ZP_06022004.1| hypothetical protein SAD30_0284 [Staphylococcus aureus D30]
gi|262051211|ref|ZP_06023435.1| hypothetical protein SA930_1642 [Staphylococcus aureus 930918-3]
gi|269203177|ref|YP_003282446.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ED98]
gi|282911187|ref|ZP_06318989.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282914356|ref|ZP_06322142.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M899]
gi|282916819|ref|ZP_06324577.1| peptidase [Staphylococcus aureus subsp. aureus D139]
gi|282919325|ref|ZP_06327060.1| peptidase [Staphylococcus aureus subsp. aureus C427]
gi|282920098|ref|ZP_06327823.1| peptidase [Staphylococcus aureus A9765]
gi|282924650|ref|ZP_06332318.1| peptidase [Staphylococcus aureus subsp. aureus C101]
gi|283770625|ref|ZP_06343517.1| peptidase [Staphylococcus aureus subsp. aureus H19]
gi|284024608|ref|ZP_06379006.1| rhomboid family protein [Staphylococcus aureus subsp. aureus 132]
gi|293503430|ref|ZP_06667277.1| peptidase [Staphylococcus aureus subsp. aureus 58-424]
gi|293510447|ref|ZP_06669153.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M809]
gi|293530987|ref|ZP_06671669.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M1015]
gi|294848580|ref|ZP_06789326.1| peptidase [Staphylococcus aureus A9754]
gi|304380862|ref|ZP_07363522.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|384547782|ref|YP_005737035.1| membrane protein [Staphylococcus aureus subsp. aureus ED133]
gi|384870090|ref|YP_005752804.1| Peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus T0131]
gi|385781834|ref|YP_005758005.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
11819-97]
gi|387143156|ref|YP_005731549.1| hypothetical protein SATW20_15450 [Staphylococcus aureus subsp.
aureus TW20]
gi|415686263|ref|ZP_11450400.1| S54 family peptidase [Staphylococcus aureus subsp. aureus CGS01]
gi|416840018|ref|ZP_11903337.1| rhomboid family peptidase [Staphylococcus aureus O11]
gi|416845827|ref|ZP_11906228.1| rhomboid family peptidase [Staphylococcus aureus O46]
gi|417654442|ref|ZP_12304161.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21193]
gi|417797331|ref|ZP_12444527.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21305]
gi|417892437|ref|ZP_12536486.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21201]
gi|417905331|ref|ZP_12549142.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21269]
gi|418277349|ref|ZP_12891936.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21178]
gi|418285050|ref|ZP_12897750.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21209]
gi|418316423|ref|ZP_12927861.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21340]
gi|418319401|ref|ZP_12930781.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21232]
gi|418321319|ref|ZP_12932665.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus VCU006]
gi|418569512|ref|ZP_13133838.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21283]
gi|418574454|ref|ZP_13138623.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21333]
gi|418579474|ref|ZP_13143569.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1114]
gi|418599967|ref|ZP_13163441.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21343]
gi|418641900|ref|ZP_13204105.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-24]
gi|418645086|ref|ZP_13207214.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-55]
gi|418646803|ref|ZP_13208896.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-88]
gi|418650585|ref|ZP_13212603.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-91]
gi|418658392|ref|ZP_13220120.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-111]
gi|418875489|ref|ZP_13429745.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC93]
gi|418903856|ref|ZP_13457897.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1770]
gi|418912160|ref|ZP_13466141.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG547]
gi|418914647|ref|ZP_13468619.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|418925809|ref|ZP_13479711.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG2018]
gi|418948536|ref|ZP_13500834.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-157]
gi|419773145|ref|ZP_14299156.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CO-23]
gi|421148571|ref|ZP_15608231.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|422742667|ref|ZP_16796670.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|424768990|ref|ZP_18196227.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CM05]
gi|424785384|ref|ZP_18212187.1| rhomboid family serine protease [Staphylococcus aureus CN79]
gi|440707269|ref|ZP_20887968.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21282]
gi|443640018|ref|ZP_21124018.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21196]
gi|448743065|ref|ZP_21724979.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/Y21]
gi|13701347|dbj|BAB42641.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
N315]
gi|14247320|dbj|BAB57711.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu50]
gi|57286128|gb|AAW38222.1| rhomboid family protein [Staphylococcus aureus subsp. aureus COL]
gi|87126822|gb|ABD21336.1| peptidase, rhomboid family [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|150374464|dbj|BAF67724.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newman]
gi|156722002|dbj|BAF78419.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
Mu3]
gi|160368587|gb|ABX29558.1| S54 family peptidase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|257271368|gb|EEV03514.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275176|gb|EEV06663.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
65-1322]
gi|257278402|gb|EEV09038.1| peptidase [Staphylococcus aureus subsp. aureus 68-397]
gi|257281753|gb|EEV11890.1| rhomboid family peptidase [Staphylococcus aureus subsp. aureus
E1410]
gi|257283925|gb|EEV14048.1| peptidase [Staphylococcus aureus subsp. aureus M876]
gi|257848586|gb|EEV72574.1| peptidase [Staphylococcus aureus A9299]
gi|257861780|gb|EEV84579.1| peptidase [Staphylococcus aureus A5948]
gi|259160848|gb|EEW45868.1| hypothetical protein SA930_1642 [Staphylococcus aureus 930918-3]
gi|259162796|gb|EEW47361.1| hypothetical protein SAD30_0284 [Staphylococcus aureus D30]
gi|262075467|gb|ACY11440.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ED98]
gi|269941039|emb|CBI49423.1| putative membrane protein [Staphylococcus aureus subsp. aureus
TW20]
gi|282313485|gb|EFB43880.1| peptidase [Staphylococcus aureus subsp. aureus C101]
gi|282317135|gb|EFB47509.1| peptidase [Staphylococcus aureus subsp. aureus C427]
gi|282319306|gb|EFB49658.1| peptidase [Staphylococcus aureus subsp. aureus D139]
gi|282321537|gb|EFB51862.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M899]
gi|282324882|gb|EFB55192.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282594446|gb|EFB99431.1| peptidase [Staphylococcus aureus A9765]
gi|283460772|gb|EFC07862.1| peptidase [Staphylococcus aureus subsp. aureus H19]
gi|290920255|gb|EFD97321.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M1015]
gi|291095096|gb|EFE25361.1| peptidase [Staphylococcus aureus subsp. aureus 58-424]
gi|291466811|gb|EFF09331.1| rhomboid family protein [Staphylococcus aureus subsp. aureus M809]
gi|294824606|gb|EFG41029.1| peptidase [Staphylococcus aureus A9754]
gi|298694831|gb|ADI98053.1| probable membrane protein [Staphylococcus aureus subsp. aureus
ED133]
gi|304340589|gb|EFM06523.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|315198756|gb|EFU29084.1| S54 family peptidase [Staphylococcus aureus subsp. aureus CGS01]
gi|320144103|gb|EFW35872.1| peptidase, S54 family protein [Staphylococcus aureus subsp. aureus
MRSA177]
gi|323440447|gb|EGA98159.1| rhomboid family peptidase [Staphylococcus aureus O11]
gi|323443221|gb|EGB00839.1| rhomboid family peptidase [Staphylococcus aureus O46]
gi|329314225|gb|AEB88638.1| Peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus T0131]
gi|329730828|gb|EGG67206.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21193]
gi|334266823|gb|EGL85293.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21305]
gi|341843607|gb|EGS84829.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21269]
gi|341857602|gb|EGS98414.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21201]
gi|364522823|gb|AEW65573.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
11819-97]
gi|365172061|gb|EHM62806.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21209]
gi|365173639|gb|EHM64128.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21178]
gi|365225551|gb|EHM66794.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus VCU006]
gi|365240520|gb|EHM81292.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21232]
gi|365241107|gb|EHM81862.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21340]
gi|371979181|gb|EHO96416.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21333]
gi|371985641|gb|EHP02702.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21283]
gi|374395556|gb|EHQ66819.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21343]
gi|375018355|gb|EHS11935.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-24]
gi|375023919|gb|EHS17364.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-55]
gi|375027871|gb|EHS21229.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-91]
gi|375032097|gb|EHS25352.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-88]
gi|375038662|gb|EHS31625.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-111]
gi|375371869|gb|EHS75629.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-157]
gi|377697501|gb|EHT21856.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1114]
gi|377722417|gb|EHT46543.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG547]
gi|377742871|gb|EHT66856.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1770]
gi|377744878|gb|EHT68855.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG2018]
gi|377758149|gb|EHT82037.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC340D]
gi|377769561|gb|EHT93329.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC93]
gi|383972969|gb|EID88990.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CO-23]
gi|394331714|gb|EJE57797.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus str. Newbould 305]
gi|402348381|gb|EJU83373.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus CM05]
gi|408423672|emb|CCJ11083.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408425662|emb|CCJ13049.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408427649|emb|CCJ15012.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408429638|emb|CCJ26803.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408431625|emb|CCJ18940.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408433619|emb|CCJ20904.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408435611|emb|CCJ22871.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|408437595|emb|CCJ24838.1| Putative uncharacterized protein [Staphylococcus aureus subsp.
aureus ST228]
gi|421956794|gb|EKU09123.1| rhomboid family serine protease [Staphylococcus aureus CN79]
gi|436506025|gb|ELP41864.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21282]
gi|443406293|gb|ELS64877.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21196]
gi|445563752|gb|ELY19909.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/Y21]
Length = 487
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|21283230|ref|NP_646318.1| hypothetical protein MW1501 [Staphylococcus aureus subsp. aureus
MW2]
gi|49486385|ref|YP_043606.1| hypothetical protein SAS1487 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253732202|ref|ZP_04866367.1| S54 family peptidase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|297207732|ref|ZP_06924167.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300911813|ref|ZP_07129256.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH70]
gi|418934519|ref|ZP_13488341.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC128]
gi|418988616|ref|ZP_13536288.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1835]
gi|448740624|ref|ZP_21722600.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/314250]
gi|21204670|dbj|BAB95366.1| conserved hypothetical protein [Staphylococcus aureus subsp. aureus
MW2]
gi|49244828|emb|CAG43288.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MSSA476]
gi|253723991|gb|EES92720.1| S54 family peptidase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|296887749|gb|EFH26647.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300886059|gb|EFK81261.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH70]
gi|377717709|gb|EHT41884.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1835]
gi|377770613|gb|EHT94374.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC128]
gi|445548591|gb|ELY16841.1| Integral membrane protein (Rhomboid family) [Staphylococcus aureus
KT/314250]
Length = 487
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|315038824|ref|YP_004032392.1| hypothetical protein LA2_08440 [Lactobacillus amylovorus GRL 1112]
gi|325957263|ref|YP_004292675.1| hypothetical protein LAC30SC_08175 [Lactobacillus acidophilus 30SC]
gi|385818055|ref|YP_005854445.1| hypothetical protein LAB52_07605 [Lactobacillus amylovorus GRL1118]
gi|312276957|gb|ADQ59597.1| hypothetical protein LA2_08440 [Lactobacillus amylovorus GRL 1112]
gi|325333828|gb|ADZ07736.1| hypothetical protein LAC30SC_08175 [Lactobacillus acidophilus 30SC]
gi|327183993|gb|AEA32440.1| hypothetical protein LAB52_07605 [Lactobacillus amylovorus GRL1118]
Length = 226
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 88/167 (52%), Gaps = 16/167 (9%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
+T L K+G +S VV + +R F+ +LH V+HL++N++ I ++G +E G
Sbjct: 34 ENTNVLMKMGAMSNYAVVVGNQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYIEPIMGHA 93
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
R + Y+L+G GG L+S + +S GAS ALFGL GA + + N N
Sbjct: 94 RFLVTYLLAGIGGNLMSLAFSSDR----GLSAGASTALFGLFGAMTAIGLRN---IHNPM 146
Query: 157 VS------ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
+S + ++ +G+++ F PGID H+GG + G LL IL
Sbjct: 147 ISFLGRQAFVLALINLGIDI---FAPGIDIWGHLGGLIVGFLLAVIL 190
>gi|418931854|ref|ZP_13485689.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1750]
gi|377713032|gb|EHT37245.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1750]
Length = 470
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 165 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 223
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 224 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 277
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 278 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 315
>gi|384550376|ref|YP_005739628.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus JKD6159]
gi|302333225|gb|ADL23418.1| peptidase, rhomboid family protein [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 487
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|258423202|ref|ZP_05686095.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|417889989|ref|ZP_12534068.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21200]
gi|418284049|ref|ZP_12896781.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21202]
gi|418558986|ref|ZP_13123533.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21252]
gi|418889364|ref|ZP_13443497.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1524]
gi|257846652|gb|EEV70673.1| conserved hypothetical protein [Staphylococcus aureus A9635]
gi|341855682|gb|EGS96526.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21200]
gi|365164913|gb|EHM56743.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21202]
gi|371976336|gb|EHO93626.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21252]
gi|377752872|gb|EHT76790.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1524]
Length = 487
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|45658531|ref|YP_002617.1| hypothetical protein LIC12696 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421085386|ref|ZP_15546239.1| peptidase, S54 family [Leptospira santarosai str. HAI1594]
gi|421103683|ref|ZP_15564280.1| peptidase, S54 family [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45601774|gb|AAS71254.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410366646|gb|EKP22037.1| peptidase, S54 family [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410432022|gb|EKP76380.1| peptidase, S54 family [Leptospira santarosai str. HAI1594]
gi|456984467|gb|EMG20522.1| peptidase, S54 family [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 239
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 87/170 (51%), Gaps = 9/170 (5%)
Query: 35 FGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
F P +L + G +R + G+ +R + +++HA HL N ++ + +E G
Sbjct: 76 FYPDGPSLLEWGA-NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILG 134
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
+R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ + +
Sbjct: 135 RIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRDD 189
Query: 155 KCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
K + M++ I + G GIDN AHIGG V+G L G IL Q+G
Sbjct: 190 KKNVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 236
>gi|387780641|ref|YP_005755439.1| hypothetical protein SARLGA251_14550 [Staphylococcus aureus subsp.
aureus LGA251]
gi|344177743|emb|CCC88222.1| putative membrane protein [Staphylococcus aureus subsp. aureus
LGA251]
Length = 487
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|409083166|gb|EKM83523.1| hypothetical protein AGABI1DRAFT_110173 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 493
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 74/138 (53%), Gaps = 4/138 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF + ++LHA +IH L N L F+ ++E + G + Y +G G +L
Sbjct: 285 FRFITPIFLHAGIIHFLLNMLGQWFLSAQIEREMGSAGFIITYFAAGIFGNVLG----GN 340
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
SVGASGA+ G L + ++I +W + + + + + +++AIG++P +D
Sbjct: 341 FALVGIPSVGASGAIMGTLAVTWVDLIAHWKYHYRPVRQLIFMFIELLISIAIGYIPYVD 400
Query: 180 NMAHIGGFVAGILLGFIL 197
N AHIGGFV G+ +G +
Sbjct: 401 NFAHIGGFVMGLFVGIVF 418
>gi|148268033|ref|YP_001246976.1| rhomboid family protein [Staphylococcus aureus subsp. aureus JH9]
gi|150394101|ref|YP_001316776.1| rhomboid family protein [Staphylococcus aureus subsp. aureus JH1]
gi|257793625|ref|ZP_05642604.1| rhomboid family protein [Staphylococcus aureus A9781]
gi|258411075|ref|ZP_05681355.1| rhomboid family protein [Staphylococcus aureus A9763]
gi|258420121|ref|ZP_05683076.1| rhomboid family protein [Staphylococcus aureus A9719]
gi|258446794|ref|ZP_05694948.1| rhomboid family protein [Staphylococcus aureus A6300]
gi|258448708|ref|ZP_05696820.1| rhomboid family protein [Staphylococcus aureus A6224]
gi|258453525|ref|ZP_05701503.1| rhomboid family protein [Staphylococcus aureus A5937]
gi|282928182|ref|ZP_06335787.1| rhomboid family protein [Staphylococcus aureus A10102]
gi|295406672|ref|ZP_06816477.1| rhomboid family protein [Staphylococcus aureus A8819]
gi|297245746|ref|ZP_06929611.1| rhomboid family protein [Staphylococcus aureus A8796]
gi|384864770|ref|YP_005750129.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|387150692|ref|YP_005742256.1| Putative membrane peptidase, contains TPR repeat domain
[Staphylococcus aureus 04-02981]
gi|415692667|ref|ZP_11454587.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus CGS03]
gi|417651337|ref|ZP_12301100.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21172]
gi|418424698|ref|ZP_12997812.1| hypothetical protein MQA_00546 [Staphylococcus aureus subsp. aureus
VRS1]
gi|418427692|ref|ZP_13000697.1| hypothetical protein MQC_00501 [Staphylococcus aureus subsp. aureus
VRS2]
gi|418433677|ref|ZP_13006269.1| hypothetical protein MQG_01236 [Staphylococcus aureus subsp. aureus
VRS4]
gi|418437172|ref|ZP_13008968.1| hypothetical protein MQI_01256 [Staphylococcus aureus subsp. aureus
VRS5]
gi|418440072|ref|ZP_13011773.1| hypothetical protein MQK_01111 [Staphylococcus aureus subsp. aureus
VRS6]
gi|418443090|ref|ZP_13014689.1| hypothetical protein MQM_01203 [Staphylococcus aureus subsp. aureus
VRS7]
gi|418446152|ref|ZP_13017626.1| hypothetical protein MQO_01783 [Staphylococcus aureus subsp. aureus
VRS8]
gi|418449166|ref|ZP_13020552.1| hypothetical protein MQQ_01563 [Staphylococcus aureus subsp. aureus
VRS9]
gi|418451979|ref|ZP_13023313.1| hypothetical protein MQS_00457 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418454973|ref|ZP_13026232.1| hypothetical protein MQU_01088 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418457851|ref|ZP_13029050.1| hypothetical protein MQW_01368 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418640342|ref|ZP_13202574.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-3]
gi|418878467|ref|ZP_13432702.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1165]
gi|418881233|ref|ZP_13435450.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1213]
gi|418884081|ref|ZP_13438274.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1769]
gi|418895312|ref|ZP_13449407.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1057]
gi|418991477|ref|ZP_13539138.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1096]
gi|419784633|ref|ZP_14310396.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-M]
gi|147741102|gb|ABQ49400.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus JH9]
gi|149946553|gb|ABR52489.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus JH1]
gi|257787597|gb|EEV25937.1| rhomboid family protein [Staphylococcus aureus A9781]
gi|257840225|gb|EEV64689.1| rhomboid family protein [Staphylococcus aureus A9763]
gi|257843832|gb|EEV68226.1| rhomboid family protein [Staphylococcus aureus A9719]
gi|257854369|gb|EEV77318.1| rhomboid family protein [Staphylococcus aureus A6300]
gi|257857986|gb|EEV80875.1| rhomboid family protein [Staphylococcus aureus A6224]
gi|257864256|gb|EEV87006.1| rhomboid family protein [Staphylococcus aureus A5937]
gi|282589989|gb|EFB95071.1| rhomboid family protein [Staphylococcus aureus A10102]
gi|285817231|gb|ADC37718.1| Putative membrane peptidase, contains TPR repeat domain
[Staphylococcus aureus 04-02981]
gi|294968419|gb|EFG44443.1| rhomboid family protein [Staphylococcus aureus A8819]
gi|297177397|gb|EFH36649.1| rhomboid family protein [Staphylococcus aureus A8796]
gi|312829937|emb|CBX34779.1| rhomboid family protein [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|315129827|gb|EFT85817.1| Rhomboid family protein [Staphylococcus aureus subsp. aureus CGS03]
gi|329727521|gb|EGG63977.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21172]
gi|375014906|gb|EHS08577.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-3]
gi|377694589|gb|EHT18954.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1165]
gi|377695118|gb|EHT19482.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1057]
gi|377714416|gb|EHT38617.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1769]
gi|377723599|gb|EHT47724.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1096]
gi|377730976|gb|EHT55034.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1213]
gi|383363843|gb|EID41169.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-M]
gi|387717980|gb|EIK05975.1| hypothetical protein MQC_00501 [Staphylococcus aureus subsp. aureus
VRS2]
gi|387719477|gb|EIK07422.1| hypothetical protein MQA_00546 [Staphylococcus aureus subsp. aureus
VRS1]
gi|387724901|gb|EIK12532.1| hypothetical protein MQG_01236 [Staphylococcus aureus subsp. aureus
VRS4]
gi|387727160|gb|EIK14692.1| hypothetical protein MQI_01256 [Staphylococcus aureus subsp. aureus
VRS5]
gi|387730222|gb|EIK17629.1| hypothetical protein MQK_01111 [Staphylococcus aureus subsp. aureus
VRS6]
gi|387735290|gb|EIK22419.1| hypothetical protein MQO_01783 [Staphylococcus aureus subsp. aureus
VRS8]
gi|387736766|gb|EIK23854.1| hypothetical protein MQM_01203 [Staphylococcus aureus subsp. aureus
VRS7]
gi|387736929|gb|EIK24015.1| hypothetical protein MQQ_01563 [Staphylococcus aureus subsp. aureus
VRS9]
gi|387744860|gb|EIK31624.1| hypothetical protein MQS_00457 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387745026|gb|EIK31788.1| hypothetical protein MQU_01088 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387746619|gb|EIK33348.1| hypothetical protein MQW_01368 [Staphylococcus aureus subsp. aureus
VRS11b]
Length = 487
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|432952307|ref|XP_004085050.1| PREDICTED: inactive rhomboid protein 1-like, partial [Oryzias
latipes]
Length = 627
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 22/195 (11%)
Query: 31 ENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWL----HANVIHLLTNSLAILFIG 86
E ++ A + + GL L + E+ FS +WL HA ++H L + + +
Sbjct: 393 EEAILCSQVACMDDVCGL---LPFLNPEVPDQFSRLWLALFLHAGILHCLVSMFFQMTVL 449
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
LE+ G+LRI ++Y+LSG G L S + + VG +G+ FG+L E+
Sbjct: 450 RDLEKLAGWLRISIIYMLSGITGNLASAIFL-----PYRAEVGPAGSQFGILACLFVELF 504
Query: 147 TNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYV 206
+W + + L+ + + G +P IDN AHI GFV+G L F L
Sbjct: 505 QSWQILERPWRAFAKLLAISVFFFSFGLLPWIDNFAHICGFVSGFFLSFAFL-------- 556
Query: 207 SGPYIAPGYELNHKK 221
PYI+ G+ +K
Sbjct: 557 --PYISFGHSDAFRK 569
>gi|355716411|gb|AES05601.1| rhomboid 5-like protein 2 [Mustela putorius furo]
Length = 646
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 444 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 503
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L V+ G +P
Sbjct: 504 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAVVLFLFICGLLPW 558
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 559 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 592
>gi|443925758|gb|ELU44527.1| rhomboid family protein [Rhizoctonia solani AG-1 IA]
Length = 1236
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 75/138 (54%), Gaps = 4/138 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF + ++LHA +IH N A L + ++E + G +LY +G G +L
Sbjct: 605 FRFITPIFLHAGIIHFALNMFAQLTLSAQVEREMGSGAFLILYASAGIFGNVLG----GN 660
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
SVGASGA+FG + +++ +W + + ML + + + +A+GF+PG+D
Sbjct: 661 FALVGVPSVGASGAIFGTVAVMWVDLLAHWKIEYRPGRKLAMLCVDLIIGVALGFVPGVD 720
Query: 180 NMAHIGGFVAGILLGFIL 197
N AH+GGF+ G+L +L
Sbjct: 721 NFAHLGGFLMGLLTAIVL 738
>gi|49483798|ref|YP_041022.1| hypothetical protein SAR1626 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282904131|ref|ZP_06312019.1| rhomboid family protein [Staphylococcus aureus subsp. aureus C160]
gi|282905958|ref|ZP_06313813.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282908868|ref|ZP_06316686.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|283958313|ref|ZP_06375764.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295428127|ref|ZP_06820759.1| hypothetical protein SIAG_00655 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297590907|ref|ZP_06949545.1| rhomboid family protein [Staphylococcus aureus subsp. aureus MN8]
gi|415682351|ref|ZP_11447667.1| hypothetical protein CGSSa00_07270 [Staphylococcus aureus subsp.
aureus CGS00]
gi|417887902|ref|ZP_12532021.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21195]
gi|418564826|ref|ZP_13129247.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21264]
gi|418582476|ref|ZP_13146554.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1605]
gi|418597192|ref|ZP_13160725.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21342]
gi|418601009|ref|ZP_13164457.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21345]
gi|418901054|ref|ZP_13455110.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1214]
gi|418909401|ref|ZP_13463397.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG149]
gi|418923231|ref|ZP_13477147.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1233]
gi|418982555|ref|ZP_13530263.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1242]
gi|418986221|ref|ZP_13533906.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1500]
gi|49241927|emb|CAG40621.1| putative membrane protein [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282327132|gb|EFB57427.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331250|gb|EFB60764.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282595749|gb|EFC00713.1| rhomboid family protein [Staphylococcus aureus subsp. aureus C160]
gi|283790462|gb|EFC29279.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295128485|gb|EFG58119.1| hypothetical protein SIAG_00655 [Staphylococcus aureus subsp.
aureus EMRSA16]
gi|297575793|gb|EFH94509.1| rhomboid family protein [Staphylococcus aureus subsp. aureus MN8]
gi|315195451|gb|EFU25838.1| hypothetical protein CGSSa00_07270 [Staphylococcus aureus subsp.
aureus CGS00]
gi|341856931|gb|EGS97758.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21195]
gi|371975963|gb|EHO93255.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21264]
gi|374395428|gb|EHQ66695.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21342]
gi|374400256|gb|EHQ71375.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21345]
gi|377702451|gb|EHT26773.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1214]
gi|377704265|gb|EHT28575.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1500]
gi|377704836|gb|EHT29145.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1242]
gi|377710886|gb|EHT35124.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1605]
gi|377735190|gb|EHT59226.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1233]
gi|377752048|gb|EHT75972.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG149]
Length = 487
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|296275094|ref|ZP_06857601.1| rhomboid family protein [Staphylococcus aureus subsp. aureus MR1]
Length = 487
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|227904420|ref|ZP_04022225.1| Rhomboid family protein [Lactobacillus acidophilus ATCC 4796]
gi|227867795|gb|EEJ75216.1| Rhomboid family protein [Lactobacillus acidophilus ATCC 4796]
Length = 226
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 89/161 (55%), Gaps = 12/161 (7%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
L K+G ++ VV + +R F+ +LH V+HL++N++ I ++G +E G R +
Sbjct: 38 VLMKMGAMNNFAVVAGHQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYMEPIMGHTRFLV 97
Query: 101 LYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSI- 159
Y+L+ GG L+S + +S GAS ALFGL GA + + N + N +S
Sbjct: 98 TYLLAEIGGNLMSLAFSADR----GLSAGASTALFGLFGAMTAIGLRN---FRNPMISYL 150
Query: 160 --TMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
L+L + +N+A+ F+PGID HIGG +AG LL IL
Sbjct: 151 GRQALVLAL-INLALDIFVPGIDIWGHIGGLIAGFLLAIIL 190
>gi|418906494|ref|ZP_13460520.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC345D]
gi|418928899|ref|ZP_13482785.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377738811|gb|EHT62820.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1612]
gi|377763399|gb|EHT87255.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC345D]
Length = 470
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 165 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 223
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 224 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 277
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 278 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 315
>gi|418892279|ref|ZP_13446392.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1176]
gi|377730573|gb|EHT54640.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1176]
Length = 487
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 295 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 332
>gi|441142545|ref|ZP_20962413.1| hypothetical protein SRIM_00110 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440622490|gb|ELQ85269.1| hypothetical protein SRIM_00110 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 303
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 88/162 (54%), Gaps = 14/162 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +GE YR + ++LH +H++ N L++ ++G LE FG +R LY+LSG GG LS
Sbjct: 134 VAEGEWYRLLTAVFLHQAPMHIIFNMLSLWWLGPPLEAAFGRVRFLALYLLSGLGGSALS 193
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L ++Q +L GASGA+FGLLGA++ I+ Y + V ++++ +N+
Sbjct: 194 YLLAAQNQPSL----GASGAIFGLLGATV--ILMRRLNYDMRPV-----LILLALNLVFT 242
Query: 174 FM-PGIDNMAHIGGFV--AGILLGFILLLRPQYGYVSGPYIA 212
F P I AH+GG V A + G + R + V G A
Sbjct: 243 FAWPDIAWQAHVGGLVMGAAVTYGMVHAPRARRALVQGATCA 284
>gi|386284983|ref|ZP_10062202.1| hypothetical protein SULAR_07038 [Sulfurovum sp. AR]
gi|385344386|gb|EIF51103.1| hypothetical protein SULAR_07038 [Sulfurovum sp. AR]
Length = 226
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/192 (34%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 26 FQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFI 85
F SL L +G L L V GE +R + M+LH + HLL N ++ +
Sbjct: 24 FSALLSQSLSDMDMQVLVDMGALFGPLTVLKGEWWRLLTAMFLHGGMTHLLMNMFSLYLV 83
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGA----- 140
G E F +Y SG GGL+S S + VGASGA+FG+ GA
Sbjct: 84 GRGAEMYFDTKSYLSIYFFSGIIGGLVSLYIHPVS-----VGVGASGAIFGVFGALAGFF 138
Query: 141 -SLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILL 198
+ E I + T K SI +I +N+ IGF +P ID AHIGG + G + GF+L
Sbjct: 139 LAHREKIASHTKAFMKDFSI-----IIAINLVIGFSIPSIDVSAHIGGLIVGFIGGFVLS 193
Query: 199 LRPQ--YGYVSG 208
P+ +GY S
Sbjct: 194 KDPKWIWGYSSA 205
>gi|310641361|ref|YP_003946119.1| rhomboid family protein [Paenibacillus polymyxa SC2]
gi|386040403|ref|YP_005959357.1| rhomboid protease gluP Intramembrane serine protease [Paenibacillus
polymyxa M1]
gi|309246311|gb|ADO55878.1| Rhomboid family protein [Paenibacillus polymyxa SC2]
gi|343096441|emb|CCC84650.1| rhomboid protease gluP Intramembrane serine protease [Paenibacillus
polymyxa M1]
Length = 207
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 88/169 (52%), Gaps = 9/169 (5%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
+ Q SENSL TL + G L N + +++R+ S M+LHA HLL NS AIL
Sbjct: 34 TVQGGSENSL------TLIRYGALI-NEAPFTDQLWRYVSAMFLHAGFDHLLFNSFAILV 86
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
LE G LR LLY+++G G +LS H + +T +SVGASGA++G+ GA L
Sbjct: 87 FAPPLERLLGSLRYVLLYLVTGVVGNILSIAHYNMVAET-TVSVGASGAIYGIYGAFLYV 145
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
+ +L + +L G+ + + I+ AH GG ++G +
Sbjct: 146 ALFQRSLMDDASRKTLYTLLGFGILFSFA-VANINWTAHFGGLLSGFFM 193
>gi|445059551|ref|YP_007384955.1| hypothetical protein A284_05970 [Staphylococcus warneri SG1]
gi|443425608|gb|AGC90511.1| hypothetical protein A284_05970 [Staphylococcus warneri SG1]
Length = 484
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH N H+L N L++ G +E G +
Sbjct: 182 SDIKLLDVGGLVHFNVVH-GEWYRLVTSMFLHFNFEHILMNMLSLYIFGKIVESVLGSWK 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y+ +G G +S S T ISVGASGA+FGL+G+ + + + T + + +
Sbjct: 241 MLAIYLFAGIFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAILYLSKT-FDKRVI 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI + +++ FM I+ MAH+GGF+ G+L+ I
Sbjct: 295 GQLLIALVILIGLSL-FMSNINVMAHLGGFIGGLLITLI 332
>gi|384867478|ref|YP_005747674.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH60]
gi|417901080|ref|ZP_12544957.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21266]
gi|418652792|ref|ZP_13214755.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-99]
gi|418955633|ref|ZP_13507570.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-189]
gi|312437983|gb|ADQ77054.1| rhomboid family protein [Staphylococcus aureus subsp. aureus TCH60]
gi|341846239|gb|EGS87436.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21266]
gi|375020960|gb|EHS14467.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-99]
gi|375370719|gb|EHS74517.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-189]
Length = 426
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 121 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 179
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 180 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 233
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 234 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 271
>gi|366089319|ref|ZP_09455792.1| membrane-associated serine protease [Lactobacillus acidipiscis KCTC
13900]
Length = 217
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 14/154 (9%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +R F+ M++H + H++ N + + FIG+++E FG R +LY++SG
Sbjct: 40 GAKVNQLIGQGEWWRLFTPMFIHIGLQHIVLNMVTLYFIGIQIEAVFGKWRFVILYLISG 99
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT---MLI 163
GG + S + IS GAS ++FGL GA L + + N + T LI
Sbjct: 100 LGGNIASFVFSPS------ISAGASTSIFGLFGAFL---MLGESYRQNPYIRATAKQFLI 150
Query: 164 LVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
LVI +N+ +GF GID HIGG +AG L ++L
Sbjct: 151 LVI-LNLGLGF-TGIDIAGHIGGLLAGFLTAYVL 182
>gi|212712139|ref|ZP_03320267.1| hypothetical protein PROVALCAL_03221 [Providencia alcalifaciens DSM
30120]
gi|212685186|gb|EEB44714.1| hypothetical protein PROVALCAL_03221 [Providencia alcalifaciens DSM
30120]
Length = 680
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 29/175 (16%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC-- 114
G+ +R+ M LH+ +HL N+LA+L IG++ E FG LR +Y+ +G G +S
Sbjct: 76 GDWWRYPISMVLHSGWLHLGLNTLALLVIGIECERAFGKLRYLAIYLFAGIVGAFVSAAW 135
Query: 115 --------------------LHQDESQQTLQISVGASGALFGLLGAS---LSEIITNWTL 151
L Q+++ + +S+GASGA+ GL AS L + + N L
Sbjct: 136 QYQEALNSAMRRFDMMSWSSLLQNDNTVYITVSLGASGAIMGLAAASVIALLKQLNNPDL 195
Query: 152 YTNKCVSITM----LILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
N ++ +I +I + + G G+DN AHIGG V G ++GF +L P+
Sbjct: 196 TKNARDTLKRPLYNIIAMIALTLINGIQSGVDNAAHIGGAVTGAIIGFTFVLIPK 250
>gi|154305263|ref|XP_001553034.1| hypothetical protein BC1G_08926 [Botryotinia fuckeliana B05.10]
Length = 547
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
YRF M+LHA +IH+ N L + +G ++E G +R L+Y+ SG G +L
Sbjct: 289 YRFILPMFLHAGIIHIGFNMLLQMTMGKEMEILIGPIRYFLVYISSGIFGFILG----GN 344
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
T S GASGALFGL+ +L +++ W + + ++L I ++ +G +PG+D
Sbjct: 345 FAATGISSTGASGALFGLIALTLLDLLYKWKERVSPMKELAFIMLDIVISFVLGLLPGLD 404
Query: 180 NMAHIGGFVAGILLGFILLLRPQ 202
N +HIGGF+ G++LG +L P
Sbjct: 405 NFSHIGGFLMGLVLGLSILRSPN 427
>gi|347826752|emb|CCD42449.1| similar to rhomboid family membrane protein [Botryotinia
fuckeliana]
Length = 547
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 4/143 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
YRF M+LHA +IH+ N L + +G ++E G +R L+Y+ SG G +L
Sbjct: 289 YRFILPMFLHAGIIHIGFNMLLQMTMGKEMEILIGPIRYFLVYISSGIFGFILG----GN 344
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
T S GASGALFGL+ +L +++ W + + ++L I ++ +G +PG+D
Sbjct: 345 FAATGISSTGASGALFGLIALTLLDLLYKWKERVSPMKELAFIMLDIVISFVLGLLPGLD 404
Query: 180 NMAHIGGFVAGILLGFILLLRPQ 202
N +HIGGF+ G++LG +L P
Sbjct: 405 NFSHIGGFLMGLVLGLSILRSPN 427
>gi|297205734|ref|ZP_06923129.1| S54 family peptidase [Lactobacillus jensenii JV-V16]
gi|297148860|gb|EFH29158.1| S54 family peptidase [Lactobacillus jensenii JV-V16]
Length = 229
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 12/182 (6%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
+F SE+S A L KLG V+ G+ +R F+ +LH ++HL+ N + + +
Sbjct: 31 TFNGGSEDS------AVLFKLGAQFNPAVIILGQWWRLFTAQFLHIGLLHLVVNCVTLFY 84
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G LE G +R ++Y+L+G GG L++ ++ +S GAS ALFGL GA ++
Sbjct: 85 MGQYLEPMLGHVRFLIIYLLAGVGGNLMTLAFGSDN----AVSAGASTALFGLFGAMIAL 140
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQY 203
I N T + +L + +N+ +P ID H+GG +AG LL IL +
Sbjct: 141 GIANRTHEGMAYLGRQSFVLAV-INLLFDINVPQIDTWGHVGGLIAGFLLTVILGDQNLR 199
Query: 204 GY 205
GY
Sbjct: 200 GY 201
>gi|379021331|ref|YP_005297993.1| putative membrane peptidase, contains TPRrepeat domain
[Staphylococcus aureus subsp. aureus M013]
gi|418562599|ref|ZP_13127056.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21262]
gi|359830640|gb|AEV78618.1| Putative membrane peptidase, contains TPRrepeat domain
[Staphylococcus aureus subsp. aureus M013]
gi|371973703|gb|EHO91051.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus 21262]
Length = 487
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 90/166 (54%), Gaps = 22/166 (13%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 182 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + +Y +K
Sbjct: 241 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFA------MMYVSKTF 289
Query: 158 SITM-------LILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+ M L++++GV++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 290 NKKMLGQLLISLVILVGVSL---FMSNINIVAHIGGFIGGLLITLI 332
>gi|444429847|ref|ZP_21225028.1| rhomboid family protein [Gordonia soli NBRC 108243]
gi|443889267|dbj|GAC66749.1| rhomboid family protein [Gordonia soli NBRC 108243]
Length = 268
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 111/266 (41%), Gaps = 56/266 (21%)
Query: 6 CPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVY---------- 55
C +N G DR G +P L L ++ N+VV+
Sbjct: 8 CLQNDGVDRATVRPQFGDRGIRPMVARPLVASRPIATYAL--IAINVVVFAICIAEAGGL 65
Query: 56 -------------------DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
DG+ +R F+ +LH +VIH+ N LA+ +G LE G
Sbjct: 66 QVLNSPLFLDWSLYKPAIADGQYWRLFTSGFLHLSVIHIAGNMLALYILGRDLELALGIP 125
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
R +YV S FGG L + ++ ++ GASGA++GL+GA L ++
Sbjct: 126 RYVAVYVTSLFGGSAFVMLFESDT----AVTAGASGAIYGLMGAILVVLL-------KAR 174
Query: 157 VSITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGY 215
+S ++ +IG+N+ + +PGI AHIGG V G + +G APG
Sbjct: 175 LSPVPVLSIIGLNIVLSIAIPGISIWAHIGGLVFGAV------------ATAGIVFAPGL 222
Query: 216 ELNHKKPKYQCHQKLLWVISVVVLFV 241
+P + + WV ++ VLFV
Sbjct: 223 LGGSSRPSAKTASIIGWV-TIAVLFV 247
>gi|422018892|ref|ZP_16365443.1| hypothetical protein OO9_09318 [Providencia alcalifaciens Dmel2]
gi|414104078|gb|EKT65650.1| hypothetical protein OO9_09318 [Providencia alcalifaciens Dmel2]
Length = 680
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 88/175 (50%), Gaps = 29/175 (16%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC-- 114
G+ +R+ M LH+ +HL N+LA+L IG++ E FG LR +Y+ +G G +S
Sbjct: 76 GDWWRYPISMVLHSGWLHLGLNTLALLVIGIECERAFGKLRYLAIYLFAGIVGAFVSAAW 135
Query: 115 --------------------LHQDESQQTLQISVGASGALFGLLGAS---LSEIITNWTL 151
L Q+++ + +S+GASGA+ GL AS L + + N L
Sbjct: 136 QYQEALNSATRRFDMMSWSSLLQNDNTVYITVSLGASGAIMGLAAASVIALLKQLNNPDL 195
Query: 152 YTNKCVSITM----LILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
N ++ +I +I + + G G+DN AHIGG V G ++GF +L P+
Sbjct: 196 TKNARDTLKRPLYNIIAMIALTLINGIQSGVDNAAHIGGAVTGAIIGFAFVLIPK 250
>gi|291548753|emb|CBL25015.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Ruminococcus torques L2-14]
Length = 206
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 94/180 (52%), Gaps = 20/180 (11%)
Query: 29 RSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVK 88
R+E+ F + + G + ++ + E YR F+ ++LH + HLL N + + +G
Sbjct: 29 RTEDGYF------MLQHGAMYEPYIIENQEYYRLFTSLFLHFGISHLLNNMVLLWALGSI 82
Query: 89 LEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITN 148
E++ G +R Y +SG GG LLS L+ + +S GASGA+FGL+G L
Sbjct: 83 FEKEAGKIRFLFCYFISGIGGNLLS-LYWNIMHDRQIVSAGASGAIFGLMGGLL------ 135
Query: 149 WTLYTNKCVSIT-----MLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRPQ 202
W ++ N+ T MLI+V+ +++ GF G+DN+AH+GG + G L + R
Sbjct: 136 WIVFANRGRLGTLSGRGMLIMVV-LSLYFGFTSTGVDNLAHVGGLICGFLTALLTYRRKN 194
>gi|346327128|gb|EGX96724.1| rhomboid family membrane protein [Cordyceps militaris CM01]
Length = 601
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 91/171 (53%), Gaps = 15/171 (8%)
Query: 40 ATLKKLGGLSRNLVVYDG---------EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
+TL GG+ V+DG + YRF +++HA +IH+ N L L + ++E
Sbjct: 340 STLCGFGGVPDP--VFDGNADQHPAPDQWYRFIIPIFMHAGIIHIGFNLLLQLTVAKEME 397
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
+ G +R L+Y+ +G G ++ S GASG+LFG++ +L +++ +W+
Sbjct: 398 QAIGSVRFFLVYMSAGIFGFVMGGNFAAPGI----ASTGASGSLFGIIALTLLDLLYSWS 453
Query: 151 LYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
+ + +IL + + +G +PG+DN +HIGGF+ G+ LG +L P
Sbjct: 454 ERRSPVKDLMFIILDMVIAFVLGLLPGLDNFSHIGGFLMGLALGICVLHSP 504
>gi|392426192|ref|YP_006467186.1| putative membrane protein [Desulfosporosinus acidiphilus SJ4]
gi|391356155|gb|AFM41854.1| putative membrane protein [Desulfosporosinus acidiphilus SJ4]
Length = 322
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 13/166 (7%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ G+++R + M++H HL N A+ +G E +G + +Y+LSG
Sbjct: 165 GAKVNSLIQAGQVWRLLTSMFIHIGYFHLAFNLYALWALGPLTELSYGHGKYFAIYMLSG 224
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
GG + S L +S GASGA+ GLLGA L I L+ + L++VI
Sbjct: 225 LGGAMASFLFSPF------LSAGASGAIMGLLGAQLFFIYKRPYLWKSGLG--MNLVIVI 276
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGILLGFIL----LLRPQYGYVS 207
VN+ GF PGIDN AH+GG G+ +G +L ++P+ +S
Sbjct: 277 LVNLGFGFWQPGIDNFAHLGGLFTGMFMGALLSWKNFIKPKSAKLS 322
>gi|257064883|ref|YP_003144555.1| membrane protein [Slackia heliotrinireducens DSM 20476]
gi|256792536|gb|ACV23206.1| uncharacterized membrane protein [Slackia heliotrinireducens DSM
20476]
Length = 267
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 87/176 (49%), Gaps = 17/176 (9%)
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
DG+ Y + M+LH ++HLL N + + +IG +E+ FG +R ++Y LSG GGL S
Sbjct: 49 DGQYYTLITSMFLHGGLMHLLCNMITMYYIGTVIEDVFGPVRFLIIYFLSGIAGGLTSMA 108
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITNWT-----LYTNKCVSITMLILVIGVNM 170
+ + + VGASGALFGL GA ++ + + + +N+
Sbjct: 109 VMIAAGENGGV-VGASGALFGLFGAYGYLLVREHRKPVVFMRPTSSSDLKGFFGFLVLNI 167
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFIL--LLRP------QYGYVSGPYIA---PGY 215
IG PGI AHIGG + G+L + L+R G++ PYI PGY
Sbjct: 168 IIGLTPGIAMEAHIGGMICGLLASIPMYELMRVAVQREIDAGHIPAPYIPKPNPGY 223
>gi|156085258|ref|XP_001610111.1| rhomboid 4 [Babesia bovis]
gi|154797363|gb|EDO06543.1| rhomboid 4 [Babesia bovis]
Length = 783
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 10/165 (6%)
Query: 36 GPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGF 95
GP+ +G LS N + GE R + ++LH HLL N L + + +E D+GF
Sbjct: 462 GPNYRIGTIVGALSANTIRIYGESSRLLTSIFLHGGRWHLLCNCLMNMLLLYVIEPDWGF 521
Query: 96 LRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK 155
R LY+ G+ L+ S GASG+LF L GA + + +W N
Sbjct: 522 KRTLALYIFGGYSANLVHA-----SMSPCIPCWGASGSLFSLYGAFIPYTVEHW---DNL 573
Query: 156 CVSITMLILVIGVNMAIGFMP--GIDNMAHIGGFVAGILLGFILL 198
+ ++++ I +++ +P G+ N AH+GGF G+ GF L
Sbjct: 574 RSPMALIVIAITISLLEIILPGVGVSNHAHLGGFAFGLCFGFATL 618
>gi|414160916|ref|ZP_11417179.1| hypothetical protein HMPREF9310_01553 [Staphylococcus simulans
ACS-120-V-Sch1]
gi|410876595|gb|EKS24493.1| hypothetical protein HMPREF9310_01553 [Staphylococcus simulans
ACS-120-V-Sch1]
Length = 485
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 89/163 (54%), Gaps = 16/163 (9%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+ +L GGL VV+ GEIYR S M++H N H+L N L++ G +E G +
Sbjct: 181 TNRSLLDWGGLVHFNVVH-GEIYRLISSMFIHFNFEHILMNMLSLFIFGKLVEAIAGHWK 239
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y +SG G ++S + T ISVGASGA+FGL+G+ + +Y +K
Sbjct: 240 MLGIYFISGIFGNIVSL-----ALDTNSISVGASGAIFGLIGSLFA------IMYLSKQY 288
Query: 158 SITMLILVIGVNMAIG----FMPGIDNMAHIGGFVAGILLGFI 196
+ ML+ ++GV + FM ++ AH+GGF+ G+L FI
Sbjct: 289 TPKMLLQLVGVLALLTVFSLFMANVNIYAHLGGFIGGLLATFI 331
>gi|443626016|ref|ZP_21110448.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
gi|443340440|gb|ELS54650.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
Length = 313
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 85/149 (57%), Gaps = 10/149 (6%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +G+ YR + M+LH + IH+L N L++ +IG LE G +R LY++SG G L+
Sbjct: 145 VAEGQWYRLLTSMFLHGSYIHILFNMLSLWWIGGPLEAALGRVRYIALYLVSGLAGSALT 204
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L +Q +L GASGA+FGL GA + ++ Y + V + +LVI + G
Sbjct: 205 YLIAAANQPSL----GASGAIFGLFGA--TAVLMRRLQYDMRPV---IALLVINLIFTFG 255
Query: 174 FMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ I AHIGG VAG+L+G+ ++ P+
Sbjct: 256 -LAQIAWQAHIGGLVAGLLVGYAMVHAPR 283
>gi|432601198|ref|ZP_19837451.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE66]
gi|431143593|gb|ELE45316.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE66]
Length = 625
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 81/141 (57%), Gaps = 4/141 (2%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS-CL 115
GE +R S ++LH++ HLL N A+L +G E G R+ ++++ SG GGL S C
Sbjct: 59 GESWRLLSSVFLHSSFPHLLMNMFALLVVGAVAERILGKWRLLIIWLFSGVFGGLTSACY 118
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITN--WTLYTNKCVSITMLILVIGVNMAIG 173
ES+Q + ISVGASGA+ G+ GA+++ + + T + N+ ++L +V +
Sbjct: 119 ALRESEQIV-ISVGASGAIMGIAGAAIATQLASGAGTYHKNQRRVFSLLGMVALTLLYGA 177
Query: 174 FMPGIDNMAHIGGFVAGILLG 194
GIDN HIGG +AG +G
Sbjct: 178 RQTGIDNACHIGGLIAGGAMG 198
>gi|10438686|dbj|BAB15310.1| unnamed protein product [Homo sapiens]
Length = 619
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 416 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 475
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 476 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 530
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 531 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 564
>gi|311112557|ref|YP_003983779.1| rhomboid family protein [Rothia dentocariosa ATCC 17931]
gi|310944051|gb|ADP40345.1| rhomboid family protein [Rothia dentocariosa ATCC 17931]
Length = 261
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/159 (35%), Positives = 86/159 (54%), Gaps = 13/159 (8%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHA--NVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
L + + GE YR + +LH+ + H++ N L++ G+ LE+ G+ R L+Y+L
Sbjct: 103 ALKWDYTEFTGEYYRVLTSGFLHSQNDYSHIVMNMLSLYIFGIALEQMMGWWRYLLVYLL 162
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
S GG L D + + VGASG +FGL+GA L ++ + +I L++
Sbjct: 163 SIVGGSFGVLLLDDPTAEV----VGASGGIFGLIGAYLVIMVV-----LRERDNIRALMI 213
Query: 165 VIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
+I VN+A GF+ PGI AH GGFV G L +LL PQ
Sbjct: 214 MIAVNVAFGFLVPGISWQAHAGGFVIGALATAVLLA-PQ 251
>gi|158311990|ref|YP_001504498.1| rhomboid family protein [Frankia sp. EAN1pec]
gi|158107395|gb|ABW09592.1| Rhomboid family protein [Frankia sp. EAN1pec]
Length = 381
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
+ +D + YR + +LH N +H+L N A+ +G +LE G LR+ L+V GG L
Sbjct: 209 LAWDDQYYRLLTAAFLHVNYLHVLVNLYALFVLGYQLEAILGRLRLVALFVACAVGGNTL 268
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAI 172
S L S SVGAS A+FG GA + + T ++++IG+N A+
Sbjct: 269 SYLVNGVSVN----SVGASTAIFGFFGA-------YYVIARRLRADTTQILILIGINFAL 317
Query: 173 GF-MPGIDNMAHIGGFVAGILLGFILLLRP 201
F + ID H+GG VAG+L+G + P
Sbjct: 318 TFTLSFIDRWGHVGGLVAGVLVGLLYAYVP 347
>gi|418920630|ref|ZP_13474562.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC348]
gi|377764356|gb|EHT88209.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIGC348]
Length = 370
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 65 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 123
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 124 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 177
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 178 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 215
>gi|160878203|ref|YP_001557171.1| rhomboid family protein [Clostridium phytofermentans ISDg]
gi|160426869|gb|ABX40432.1| Rhomboid family protein [Clostridium phytofermentans ISDg]
Length = 396
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 88/157 (56%), Gaps = 7/157 (4%)
Query: 52 LVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGL 111
L+ ++ E YR + +LHAN+ HL+ N L + +G LE G + L+Y LSG G+
Sbjct: 242 LIKFNNEYYRLLTYQFLHANISHLVNNMLILAIMGSTLERHVGKFKYLLIYFLSGIVAGI 301
Query: 112 LSCLHQDESQQTLQISVGASGALFGLLGA-SLSEIITNWTLYTNKCVSITMLILVIGVNM 170
S + + + S+GASGA+FG++GA +L ++ L T + +I+ I +++
Sbjct: 302 AS-MSYNMWKGLFSNSIGASGAVFGVIGAIALIVVVNKGRLET---IGTRQIIIFIALSL 357
Query: 171 AIGFMP-GIDNMAHIGGFVAGILLGFILLLRPQYGYV 206
GF G+DN AH+GG +AG + +L+ R + G +
Sbjct: 358 YGGFTSQGVDNAAHVGGLLAGFFIA-MLVYRKKRGRI 393
>gi|374323241|ref|YP_005076370.1| rhomboid family protein [Paenibacillus terrae HPL-003]
gi|357202250|gb|AET60147.1| rhomboid family protein [Paenibacillus terrae HPL-003]
Length = 207
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 83/164 (50%), Gaps = 9/164 (5%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
SENSL TL + G L N + +++R+ S M+LHA HL NS AIL L
Sbjct: 39 SENSL------TLIRYGALI-NEEPFTAQLWRYVSAMFLHAGFDHLFFNSFAILVFAPPL 91
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E G R LLY+ +G G ++S H + + +T +SVGASGA++G+ GA L +
Sbjct: 92 ERLLGSFRYALLYLATGIVGNVMSIAHYNMAAET-TVSVGASGAIYGIYGAFLYVALFQR 150
Query: 150 TLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
TL +L G+ + + I+ AH GG ++G L
Sbjct: 151 TLMDEASRKTLYTLLGFGILFSFA-VANINWTAHFGGLLSGFFL 193
>gi|227892800|ref|ZP_04010605.1| S54 family peptidase [Lactobacillus ultunensis DSM 16047]
gi|227865441|gb|EEJ72862.1| S54 family peptidase [Lactobacillus ultunensis DSM 16047]
Length = 226
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 87/164 (53%), Gaps = 12/164 (7%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
ST L K+G ++ VV + +R F+ +LH V+HL++N++ I ++G +E G R
Sbjct: 35 STNVLMKMGAMNNLAVVAGHQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYIEPIMGHYR 94
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
Y+L+G GG L S + +S GAS ALFGL GA + + N N +
Sbjct: 95 YLATYLLAGIGGNLFSLAFSADR----GLSAGASTALFGLFGAMTAIGLRN---IHNPMI 147
Query: 158 SI---TMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
S +L I +N+A+ F+PGID H+GG + G LL +L
Sbjct: 148 SFLGRQAFVLAI-INLALDIFIPGIDIWGHVGGLITGFLLAIVL 190
>gi|224011189|ref|XP_002295369.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583400|gb|ACI64086.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 148
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 86/158 (54%), Gaps = 25/158 (15%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
+ DGE +R F+ ++LHA +IHL+ N + + G + E+++G L ++Y+ S FG +LS
Sbjct: 1 IDDGEWWRLFTPIFLHAGLIHLVGNVMVQIESGNRWEKEWGSLIWLVVYIGSAFGSSILS 60
Query: 114 -CLHQDESQQTLQISVGASGALFGLLGASLSEIIT--------------NWTLYTNKCVS 158
C+ D QI VG+SGA+ GL GA +EI+ + C+
Sbjct: 61 VCVMPD------QIGVGSSGAVMGLFGAKFAEILLMCCERSETRAERAGERSRKEQACLV 114
Query: 159 ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
I +I+V MA+ F+P +D AH+GG AG ++G +
Sbjct: 115 IGGIIIV----MAMSFIPYVDWAAHLGGLCAGFVIGMV 148
>gi|345007980|ref|YP_004810334.1| rhomboid family protein [Streptomyces violaceusniger Tu 4113]
gi|344034329|gb|AEM80054.1| Rhomboid family protein [Streptomyces violaceusniger Tu 4113]
Length = 294
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 88/157 (56%), Gaps = 12/157 (7%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G ++ + V +G+ +R + ++LH +IH+ N L++ +IG LE G +R +LY+LSG
Sbjct: 118 GAAQIVGVAEGQWWRLVTSIFLHQQLIHIAFNMLSLWWIGGPLEAALGRVRFIVLYILSG 177
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
GG LS L ++Q +L GASGA+FGLLGA+ L + +I ++
Sbjct: 178 LGGSALSYLLAAQNQPSL----GASGAIFGLLGATA-------VLMRRLNYDMRPVIALL 226
Query: 167 GVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
+N+ F GI AH+GG VAG ++ + ++ P+
Sbjct: 227 ALNLLFTFTWSGIAWQAHVGGLVAGTVVAYGMVHAPR 263
>gi|26324818|dbj|BAC26163.1| unnamed protein product [Mus musculus]
Length = 827
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
N V D + YR + ++LHA ++H L + + + I LE+ G+ RI ++++LSG G
Sbjct: 618 NPEVPD-QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGN 676
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
L S + + VG +G+ FGLL E+ +W L + L ++
Sbjct: 677 LASAIFL-----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVPFLF 731
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
G +P IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 732 ICGLLPWIDNIAHIFGFLSGMLLAFAFL----------PYITFGTSDKYRK 772
>gi|54311162|gb|AAH35829.1| RHBDF2 protein [Homo sapiens]
Length = 649
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 446 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 505
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 506 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 560
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 561 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 594
>gi|93006714|ref|YP_581151.1| rhomboid-like protein [Psychrobacter cryohalolentis K5]
gi|92394392|gb|ABE75667.1| Rhomboid-like protein [Psychrobacter cryohalolentis K5]
Length = 348
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 105/220 (47%), Gaps = 20/220 (9%)
Query: 21 LGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSL 80
+G F Q + PST L K G + + D E +R S +LH ++HLL N
Sbjct: 21 IGLFIMQVLTGVDANNPSTEALIKWGANALPFTM-DNEPWRLVSSAFLHIGLMHLLFNGF 79
Query: 81 AILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS--CLHQDESQQTLQ--ISVGASGALFG 136
A+ F G E FG + L++L+ GG LL+ Q T Q +S GASG + G
Sbjct: 80 AMYFFGQIAEPMFGSAKFLALFLLAAIGGNLLNNYVTWQGIVDGTGQAGLSAGASGGIMG 139
Query: 137 ----LLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGI 191
LL A+L +I N +++ LI ++G+N+ GF +PGIDN HIGG + G+
Sbjct: 140 IGAALLIAALFKISVN-----GMVLNLKSLIFIMGINLVYGFAVPGIDNAGHIGGAITGL 194
Query: 192 L--LGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQK 229
+ L F + R + V YE N P YQ Q+
Sbjct: 195 IISLPFAIAYRQRMAAVIQNIAT--YE-NDYLPHYQSEQQ 231
>gi|455791418|gb|EMF43234.1| peptidase, S54 family [Leptospira interrogans serovar Lora str. TE
1992]
Length = 156
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 82/158 (51%), Gaps = 8/158 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G +R + G+ +R + +++HA HL N ++ + +E G +R +LY+ SG
Sbjct: 4 GANRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPILGRIRFLILYIFSG 63
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
G L S + + ISVGASGA+FGL GA L ++ + +K + M++ I
Sbjct: 64 LCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRDDKKNVLIMIVTFI 118
Query: 167 GVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+ G GIDN AHIGG V+G L G IL Q+G
Sbjct: 119 LTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 153
>gi|407796208|ref|ZP_11143164.1| S54 family peptidase [Salimicrobium sp. MJ3]
gi|407019562|gb|EKE32278.1| S54 family peptidase [Salimicrobium sp. MJ3]
Length = 507
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 15/150 (10%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N + +GE +R S M+LH V+HLL N LA+ ++G +E+ +G R ++Y L+G
Sbjct: 214 GAKYNPGIIEGEWWRLISSMFLHIGVLHLLMNMLALFYLGTAVEQIYGSFRFTMIYFLAG 273
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM---LI 163
G S ++ GASGA+FGL GA L +L+ TM LI
Sbjct: 274 ILGSAASFYF------NTSVAAGASGAIFGLFGALLYFAWRYPSLFFR-----TMGWNLI 322
Query: 164 LVIGVNMAIGF-MPGIDNMAHIGGFVAGIL 192
+++ +N+ G +P +DN H+GG + G L
Sbjct: 323 ILVAINIVFGITVPQVDNSGHMGGLIGGFL 352
>gi|418952134|ref|ZP_13504176.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-160]
gi|375369792|gb|EHS73653.1| peptidase, S54 family [Staphylococcus aureus subsp. aureus IS-160]
Length = 303
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 121 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 179
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 180 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 233
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 234 GQLLISLVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 271
>gi|449710524|gb|EMD49581.1| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
KU27]
Length = 334
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 7/172 (4%)
Query: 26 FQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFI 85
F+ S N + GP++ + LG + + + +++R + ++LH +IHLL N L +
Sbjct: 118 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLLCNLTMQLRL 177
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
G+ +E + R ++Y +SG G S + Q S I VGASG+L G+ G + +I
Sbjct: 178 GMIIERRWNSFRFLIVYFVSGIIGNCFSIICQPTS-----IGVGASGSLLGIFGGFVVDI 232
Query: 146 ITNWTLYTNKC--VSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
I N + N+ I L++ I + F PGID AH+ GF+ G + F
Sbjct: 233 IINKKKFENRVWLSLIGRLMISIIIIFVFSFAPGIDYSAHVFGFIGGAICAF 284
>gi|441644013|ref|XP_003279183.2| PREDICTED: inactive rhomboid protein 2 [Nomascus leucogenys]
Length = 736
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
N V D + YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G
Sbjct: 527 NPEVPD-QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGN 585
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
L S + + VG +G+ FGLL E+ +W L + L ++
Sbjct: 586 LASTIFL-----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLF 640
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
G +P IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 641 ICGLLPWIDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 681
>gi|256850860|ref|ZP_05556249.1| membrane-associated serine protease [Lactobacillus jensenii
27-2-CHN]
gi|260661071|ref|ZP_05861985.1| membrane-associated serine protease [Lactobacillus jensenii
115-3-CHN]
gi|256615922|gb|EEU21110.1| membrane-associated serine protease [Lactobacillus jensenii
27-2-CHN]
gi|260548008|gb|EEX23984.1| membrane-associated serine protease [Lactobacillus jensenii
115-3-CHN]
Length = 215
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 20/186 (10%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
+F SE+S A L KLG V+ G+ +R F+ +LH ++HL+ N + + +
Sbjct: 17 TFNGGSEDS------AVLFKLGAQFNPAVIILGQWWRLFTAQFLHIGLLHLVVNCVTLFY 70
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G LE G +R ++Y+L+G GG L++ ++ +S GAS ALFGL GA ++
Sbjct: 71 MGQYLEPMLGHVRFLIIYLLAGVGGNLMTMAFGSDN----AVSAGASTALFGLFGAMIAL 126
Query: 145 IITNWT-----LYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLL 199
I N T + + ++ L+ +N +P ID H+GG +AG LL IL
Sbjct: 127 GIANRTHEGMAYLGRQSFVLAVINLLFDIN-----VPQIDTWGHVGGLIAGFLLTVILGD 181
Query: 200 RPQYGY 205
+ GY
Sbjct: 182 QNLRGY 187
>gi|238853801|ref|ZP_04644167.1| membrane-associated serine protease [Lactobacillus gasseri 202-4]
gi|238833610|gb|EEQ25881.1| membrane-associated serine protease [Lactobacillus gasseri 202-4]
Length = 228
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 91/168 (54%), Gaps = 8/168 (4%)
Query: 32 NSLFGPSTA--TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
++ G ST TL +LG ++ LV + + +R F+ +LH +H+ +N++ I ++G +
Sbjct: 29 ETIMGGSTNINTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYVGQFM 88
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E G R +Y+LSG GG LLS + +S +S GAS ALFGL G ++ + N
Sbjct: 89 EPLLGHWRFLSVYLLSGIGGNLLSYAYGSDS----VVSAGASTALFGLFGVVIALYLANR 144
Query: 150 TLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFI 196
+ + L L I +N+A+ F ID + H+G ++G LLG I
Sbjct: 145 AIPAINYLGKQALALAI-INLALDLFASHIDILGHLGDLISGFLLGII 191
>gi|302552712|ref|ZP_07305054.1| rhomboid family protein [Streptomyces viridochromogenes DSM 40736]
gi|302470330|gb|EFL33423.1| rhomboid family protein [Streptomyces viridochromogenes DSM 40736]
Length = 296
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V GE YR + M+ H + H+ N L++ ++G LE G +R LY++SG G L+
Sbjct: 127 VAGGEWYRMVTSMFTHQEIWHIAFNMLSLWWLGGPLEAALGRVRYLALYLVSGLAGSALA 186
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L + TL GASGA+FGL GA+ L + +I ++ +N+
Sbjct: 187 YLLASPNTATL----GASGAIFGLFGATA-------VLMRRLNYDMRPIIALLAINLIFT 235
Query: 174 FMPG--IDNMAHIGGFVAGILLGFILLLRPQ 202
F PG I AHIGG VAG+++G+ ++ P+
Sbjct: 236 FSPGFNISWQAHIGGLVAGVVIGYAMVHAPR 266
>gi|328714292|ref|XP_003245324.1| PREDICTED: rhomboid family member 1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1358
Score = 76.6 bits (187), Expect = 9e-12, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + +++HA ++HL T + F+ LE+ G LRI L+Y+ SG G L S +
Sbjct: 1150 QFYRLWISLFIHAGILHLATTIVIQYFLMRDLEKLTGSLRIALIYLGSGVAGNLGSAIFV 1209
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL + E++ W + +++ L+ + + +G +P
Sbjct: 1210 -----PYRADVGPAGSQFGLLACLIVEVLNCWPMLKRPEQALSKLLAITFLLFLLGLLPW 1264
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVS-GPY 210
+DN AH+ GF+ G LL + LL +VS GPY
Sbjct: 1265 VDNFAHLFGFIFGFLLSYALL-----PFVSFGPY 1293
>gi|328714294|ref|XP_001950020.2| PREDICTED: rhomboid family member 1-like isoform 1 [Acyrthosiphon
pisum]
Length = 1386
Score = 76.3 bits (186), Expect = 9e-12, Method: Composition-based stats.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 11/154 (7%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + +++HA ++HL T + F+ LE+ G LRI L+Y+ SG G L S +
Sbjct: 1178 QFYRLWISLFIHAGILHLATTIVIQYFLMRDLEKLTGSLRIALIYLGSGVAGNLGSAIFV 1237
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL + E++ W + +++ L+ + + +G +P
Sbjct: 1238 -----PYRADVGPAGSQFGLLACLIVEVLNCWPMLKRPEQALSKLLAITFLLFLLGLLPW 1292
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVS-GPY 210
+DN AH+ GF+ G LL + LL +VS GPY
Sbjct: 1293 VDNFAHLFGFIFGFLLSYALL-----PFVSFGPY 1321
>gi|227530504|ref|ZP_03960553.1| S54 family peptidase [Lactobacillus vaginalis ATCC 49540]
gi|227349609|gb|EEJ39900.1| S54 family peptidase [Lactobacillus vaginalis ATCC 49540]
Length = 220
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 98/171 (57%), Gaps = 16/171 (9%)
Query: 33 SLFGPST--ATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
+L G ST + L + G +L+ ++G+ +R + ++LH + HL+ NS+ + F+G+ +E
Sbjct: 27 TLLGGSTNFSVLIECGARVTSLI-HEGQWWRLITPVFLHIGIAHLIINSITLYFLGMYIE 85
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
E F R+ ++Y++S F G L S + IS GAS ALFGL GA L + +
Sbjct: 86 ELFSHWRMLVIYLVSAFTGNLASAYFLPNT-----ISAGASTALFGLFGAFL---MLGES 137
Query: 151 LYTNKCV---SITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
+ N+ + S LILV G+N+ + F+PG+D HIGG + G L+ +++
Sbjct: 138 FHDNELIQDLSRQFLILV-GINIVMDFFLPGVDLAGHIGGLLGGFLISYVV 187
>gi|418886814|ref|ZP_13440962.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1150]
gi|377725767|gb|EHT49880.1| rhomboid family protein [Staphylococcus aureus subsp. aureus
CIG1150]
Length = 314
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/159 (36%), Positives = 90/159 (56%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR + M+LH + H+L N L++ G +E G R
Sbjct: 9 SDVKLLDVGGLVHFNVVH-GEWYRIVTSMFLHFSFEHILMNMLSLFIFGKIVEAIIGSWR 67
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ +Y ++G G +S S T ISVGASGA+FGL+G+ + + + T + K +
Sbjct: 68 MLTVYFIAGLFGNFVSL-----SFNTTTISVGASGAIFGLIGSIFAMMYVSKT-FNKKML 121
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
++ LVI V +++ FM I+ +AHIGGF+ G+L+ I
Sbjct: 122 GQLLIALVILVGVSL-FMSNINIVAHIGGFIGGLLITLI 159
>gi|361127409|gb|EHK99378.1| putative Inactive rhomboid protein 1 [Glarea lozoyensis 74030]
Length = 302
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF ++LHA +IH+ N L + +G ++E G +R L+Y+ SG G +L E
Sbjct: 105 FRFIVPIFLHAGIIHIGFNMLLQMTLGREMEMIIGSIRYFLVYIASGIFGFVLGGNFAAE 164
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S GASG+LFG+L +L +++ +W + ++L I ++ +G +PG+D
Sbjct: 165 GIA----STGASGSLFGILALTLLDLLYHWAERISPWKDFAFIMLDIAISFVLGLLPGLD 220
Query: 180 NMAHIGGFVAGILLGFILLLRP 201
N +HIGGF+ GI LG +L P
Sbjct: 221 NFSHIGGFIMGIALGICILHSP 242
>gi|358389732|gb|EHK27324.1| hypothetical protein TRIVIDRAFT_34861 [Trichoderma virens Gv29-8]
Length = 510
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 83/145 (57%), Gaps = 4/145 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF +++HA +IH+ N L L IG ++E G +R L+Y+ +G G ++ +
Sbjct: 274 QWFRFIIPIFMHAGLIHIGFNLLMQLTIGKEMEMAIGSIRFFLVYMSAGIFGFVMGGNYA 333
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S GASG+LFG++ +L +++ +W + + +I+ + ++ +G +PG
Sbjct: 334 APGIA----STGASGSLFGIIALTLLDLLYSWKDRRSPVKDLLFIIIDMVISFVLGLLPG 389
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQ 202
+DN +HIGGF+ G++LG +L P
Sbjct: 390 LDNFSHIGGFLMGLVLGICVLHSPN 414
>gi|167387754|ref|XP_001738294.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898583|gb|EDR25416.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 334
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Query: 26 FQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFI 85
F+ S N + GP++ + LG + + + +++R + ++LH +IHL+ N L +
Sbjct: 118 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLICNLTMQLRL 177
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
G+ +E + R ++Y +SG G S + Q S I VGASG+L G+ G + +I
Sbjct: 178 GMIIERRWNSFRFLVVYFVSGIIGNCFSIICQPTS-----IGVGASGSLLGIFGGFVIDI 232
Query: 146 ITNWTLYTNKCV--SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
I N + N+ I L++ I + F PGID AHI GF+ G + F LL
Sbjct: 233 IINKNKFENRVWLNLIGRLMISIIIIFVFSFAPGIDYSAHIFGFIGGAICAFGLL 287
>gi|302559651|ref|ZP_07311993.1| rhomboid family protein [Streptomyces griseoflavus Tu4000]
gi|302477269|gb|EFL40362.1| rhomboid family protein [Streptomyces griseoflavus Tu4000]
Length = 295
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +GE YR F+ M+ H + H+ N L++ ++G LE+ G +R LY++SG GG L+
Sbjct: 127 VAEGEWYRLFTSMFTHQEIWHIAFNMLSLWWLGGPLEQALGRVRYLTLYLISGLAGGALT 186
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L + +L GASGA+FGL GA + ++ Y + V + +LVI + G
Sbjct: 187 YLLASGTTASL----GASGAIFGLFGA--TAVLMRRLNYDMRPV---IALLVINLIFTFG 237
Query: 174 FMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ I AHIGG VAG+++G+ ++ P+
Sbjct: 238 WS-NIAWQAHIGGLVAGVVIGYAMVHAPR 265
>gi|238854484|ref|ZP_04644823.1| rhomboid protease GluP [Lactobacillus jensenii 269-3]
gi|313471846|ref|ZP_07812338.1| rhomboid family protein [Lactobacillus jensenii 1153]
gi|238832911|gb|EEQ25209.1| rhomboid protease GluP [Lactobacillus jensenii 269-3]
gi|313449012|gb|EEQ68240.2| rhomboid family protein [Lactobacillus jensenii 1153]
Length = 229
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 8/182 (4%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+A L KLG ++ G+ +R F+ +LH ++HL+ N + + ++G LE G +R
Sbjct: 38 ESAVLFKLGAQFNPAIIILGQWWRLFTAQFLHIGLLHLVVNCVTLFYMGQYLEPMLGHVR 97
Query: 98 IGLLYVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
++Y+L+G GG L++ L D + +S GAS ALFGL GA ++ I N T
Sbjct: 98 FLIIYLLAGVGGNLMTLALGSDNA-----VSAGASTALFGLFGAMIALGIANRTHEGMAY 152
Query: 157 VSITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGY 215
+ +L + +N+ +P ID H+GG +AG LL IL + GY I G+
Sbjct: 153 LGRQSFVLAV-INLLFDINIPQIDTWGHVGGLLAGFLLTVILGDQNLRGYKLPIKILAGF 211
Query: 216 EL 217
L
Sbjct: 212 AL 213
>gi|317472135|ref|ZP_07931467.1| rhomboid family protein [Anaerostipes sp. 3_2_56FAA]
gi|316900539|gb|EFV22521.1| rhomboid family protein [Anaerostipes sp. 3_2_56FAA]
Length = 309
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
L+ ++ + G L+ GE+YR + +LH HL N + + IG +LE F
Sbjct: 141 LWSAASTEILNWGALTWMHAFKQGELYRLVTSNFLHNGFDHLFNNMIVFVLIGSRLEPIF 200
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R LY+ +G G ++S ++ + + SVGASGA+FGL+GA L W L
Sbjct: 201 GRARYVALYMGAGLCGSIVSAVYYMNMGEMVA-SVGASGAIFGLIGAML------WILIK 253
Query: 154 NKCVSITM----LILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRPQYG 204
N+ + L+I ++ GF G+DN AHIGG + G LL ILL R G
Sbjct: 254 NRGYQKEFYGGGVALMIAGSLYHGFSTMGVDNAAHIGGCIGGFLLA-ILLYRQDRG 308
>gi|345000844|ref|YP_004803698.1| Rhomboid family protein [Streptomyces sp. SirexAA-E]
gi|344316470|gb|AEN11158.1| Rhomboid family protein [Streptomyces sp. SirexAA-E]
Length = 299
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 80/151 (52%), Gaps = 13/151 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +G+ YR F+ M+LH V H+ N L + ++G LE G +R LY+LSG G L+
Sbjct: 130 VAEGQWYRLFTSMFLHQEVWHIAFNMLGLWWLGGPLEAALGRVRYLALYLLSGLAGSALT 189
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
D +Q +L GASGA+FGLLGA+ L + +I ++ VN+
Sbjct: 190 YAVSDPAQGSL----GASGAVFGLLGATA-------VLMRRMNYDMRPVIALLVVNLIFT 238
Query: 174 FMP--GIDNMAHIGGFVAGILLGFILLLRPQ 202
F P I AH+GG VAG+++ ++ P+
Sbjct: 239 FNPWGSIAWQAHLGGLVAGVVMAIAMVHAPR 269
>gi|357453415|ref|XP_003596984.1| Rhomboid family member [Medicago truncatula]
gi|355486032|gb|AES67235.1| Rhomboid family member [Medicago truncatula]
Length = 221
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Query: 28 PRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGV 87
P + N L G S TL K+G + YR F+C+WLHA VI LL N L IL+ +
Sbjct: 122 PITHNPLMGSSPLTLVKMGAMYFQKSDRLHHAYRLFTCLWLHAGVIDLLLNMLNILYYYI 181
Query: 88 KLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASG 132
LE+ FG++RI +L+ +SG G L S L S +SVGASG
Sbjct: 182 YLEKKFGYIRIAILHTMSGMGSNLFSALCIPTS-----VSVGASG 221
>gi|183230651|ref|XP_651687.2| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
HM-1:IMSS]
gi|169802835|gb|EAL46300.2| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
HM-1:IMSS]
Length = 304
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 7/172 (4%)
Query: 26 FQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFI 85
F+ S N + GP++ + LG + + + +++R + ++LH +IHLL N L +
Sbjct: 88 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLLCNLTMQLRL 147
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
G+ +E + R ++Y +SG G S + Q S I VGASG+L G+ G + +I
Sbjct: 148 GMIIERRWNSFRFLIVYFVSGIIGNCFSIICQPTS-----IGVGASGSLLGIFGGFVVDI 202
Query: 146 ITNWTLYTNKC--VSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
I N + N+ I L++ I + F PGID AH+ GF+ G + F
Sbjct: 203 IINKKKFENRVWLSLIGRLMISIIIIFVFSFAPGIDYSAHVFGFIGGAICAF 254
>gi|168210042|ref|ZP_02635667.1| rhomboid family protein [Clostridium perfringens B str. ATCC 3626]
gi|170711841|gb|EDT24023.1| rhomboid family protein [Clostridium perfringens B str. ATCC 3626]
Length = 342
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
+G N +++ GE YR + M+LH ++HLL N A+ +G +E +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SG + S + + VGASGA+FGLLGA+L N K + +T +I+
Sbjct: 249 SGIVASIFSLYF------SPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKAL-VTNIIV 300
Query: 165 VIGVNMAIGF-MPGIDNMAHIGGFVAGILLG 194
+I +N+ I M ID AH GGF+AG +LG
Sbjct: 301 IILLNVFISLSMSNIDISAHFGGFIAGAILG 331
>gi|397612848|gb|EJK61912.1| hypothetical protein THAOC_17510, partial [Thalassiosira oceanica]
Length = 434
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 87/158 (55%), Gaps = 8/158 (5%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L G +L++ +++R + ++LH + HL+ NS ++ +G +E FG R
Sbjct: 239 LTAWGAKRSDLLLEGRQLHRLITPVFLHGGIGHLVANSYSLKSMGNNVEGAFGPARTLAT 298
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT- 160
Y++SG G + S ++ + +VGASGA+FGL+GA + + N ++ + +
Sbjct: 299 YLVSGVAGNIFSAVN------SPNPAVGASGAIFGLVGAYYTFLARNSEIFGHSGRAQKG 352
Query: 161 MLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFIL 197
L+ IG+N+ +G P IDN HIGGF+ G+ + +++
Sbjct: 353 ALLETIGINLVLGMTNPVIDNWGHIGGFIGGVGMSWLI 390
>gi|163815124|ref|ZP_02206505.1| hypothetical protein COPEUT_01280 [Coprococcus eutactus ATCC 27759]
gi|158449533|gb|EDP26528.1| peptidase, S54 family [Coprococcus eutactus ATCC 27759]
Length = 333
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 81/146 (55%), Gaps = 4/146 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YRF + M+ H + HLL N + ++ +G ++E G L ++Y+++G S ++
Sbjct: 183 QYYRFLTSMFTHFGITHLLGNMVILIALGARIENIIGRLNYVIVYIVTGLAAAFASYINF 242
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM-P 176
S GASGA+FGLLG + +I + K +S+ +I++ + + G M
Sbjct: 243 -FCNDIYDYSAGASGAIFGLLGVLV--VIAFYNKGRVKDLSLMNMIILFILTLVDGLMSE 299
Query: 177 GIDNMAHIGGFVAGILLGFILLLRPQ 202
GIDN+AH GF+AGIL G +LLL Q
Sbjct: 300 GIDNVAHAAGFMAGILAGIVLLLVNQ 325
>gi|47226109|emb|CAG04483.1| unnamed protein product [Tetraodon nigroviridis]
Length = 626
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 12/172 (6%)
Query: 31 ENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWL----HANVIHLLTNSLAILFIG 86
E + A + + GL L + E+ FS +WL HA V+H L + + + +
Sbjct: 395 EEATLCSQVACMDDICGL---LPFLNPEVPDQFSRLWLSLFLHAGVLHCLVSVVFQMTVL 451
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
+E+ G+LR+ ++Y+LSG G L S + + VG +G+ FG+L E+
Sbjct: 452 RDIEKLVGWLRVSIIYMLSGITGNLASAIFL-----PYRAEVGPAGSQFGILACLFVELF 506
Query: 147 TNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
+W + + L+ + + G +P IDN AHI GFV+G L F L
Sbjct: 507 QSWPILERPWRAFAKLLAISTFFFSFGLLPWIDNFAHICGFVSGFFLSFAFL 558
>gi|294501246|ref|YP_003564946.1| membrane endopeptidase [Bacillus megaterium QM B1551]
gi|294351183|gb|ADE71512.1| membrane endopeptidase [Bacillus megaterium QM B1551]
Length = 506
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ +GE +RFF+ + LH ++HLL NS+A+ ++G +E +G R +Y+ +G
Sbjct: 211 GAKYNPLIMEGEWWRFFTPVILHIGLLHLLMNSVALYYLGTLVERIYGSGRFVFIYIFAG 270
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
F G L S + IS GASGA+FG GA L TN + S ++I+VI
Sbjct: 271 FAGSLGSFIW------NTSISAGASGAIFGCFGALLFIARTNPRFFFRTMGSSFIVIIVI 324
Query: 167 GVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
N+ GF+ P +DN HIGG V G L I+ L Q
Sbjct: 325 --NLIFGFVAPNVDNAGHIGGLVGGFLAASIVSLPKQ 359
>gi|253682458|ref|ZP_04863255.1| putative rhomboid protease GluP [Clostridium botulinum D str. 1873]
gi|253562170|gb|EES91622.1| putative rhomboid protease GluP [Clostridium botulinum D str. 1873]
Length = 200
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G + N +V G+ YR +CM+LH ++HL+ N A+ +G +E+ +G + ++Y+L G
Sbjct: 50 GANENTLVASGQYYRLITCMFLHGGLMHLILNMYALNALGPIIEKSYGKNKYIIIYLLGG 109
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
+ S + + +S+GASGA+F LLGA L I ++ +I +I VI
Sbjct: 110 LISSISSFIFSN------GVSIGASGAIFSLLGAILVLTIKMRSVVGKD--TIKNVISVI 161
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGILLGFIL 197
VN+ IG +P IDN AH+GG + G+ L +L
Sbjct: 162 VVNIFIGLAIPNIDNFAHVGGLLGGVFLSILL 193
>gi|348551344|ref|XP_003461490.1| PREDICTED: inactive rhomboid protein 2-like [Cavia porcellus]
Length = 824
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 621 QFYRLWLSLFLHAGLVHCLVSVIFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 680
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 681 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLFAIVLFLFICGLLPW 735
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 736 IDNIAHIFGFLSGMLLAFAFL----------PYITFGTSDKYRK 769
>gi|347755936|ref|YP_004863500.1| hypothetical protein [Candidatus Chloracidobacterium thermophilum
B]
gi|347588454|gb|AEP12984.1| putative membrane protein [Candidatus Chloracidobacterium
thermophilum B]
Length = 424
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 81/164 (49%), Gaps = 10/164 (6%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L G +R L+ GE++R M+LH +IHLL N A+ +G +LE +G R +L
Sbjct: 87 LTAFGACNRKLI-DQGEVWRLVVPMFLHIGMIHLLANMYALWVLGPQLESLYGSARFTIL 145
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y+LSG GG + S I GASGALFG+ GA L + + V TM
Sbjct: 146 YLLSGIGGFVASYFFAHPE----SIGAGASGALFGMFGALLV-FVYKYRAEIPPMVRATM 200
Query: 162 ---LILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRP 201
+ L + +N+ I F +P I H+GG + GI L + P
Sbjct: 201 QRGVWLTLIINLVITFSIPFISRSGHVGGLLTGIGLALFIPYSP 244
>gi|156741085|ref|YP_001431214.1| rhomboid family protein [Roseiflexus castenholzii DSM 13941]
gi|156232413|gb|ABU57196.1| Rhomboid family protein [Roseiflexus castenholzii DSM 13941]
Length = 281
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 75/131 (57%), Gaps = 10/131 (7%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS-CL 115
G+ YRF + M+LH + HL NS A+ +G + E FG R +Y+L+G GGG+ S L
Sbjct: 100 GQYYRFLTAMFLHGGLAHLFFNSFALYSLGFETERLFGAQRFLAIYMLAGLGGGVASYAL 159
Query: 116 HQDESQQTLQISVGASGALFGLLGASLS-EIITNWTLYTNKCVSITMLILVIGVNMAIGF 174
+ + SVGASGA+FGL+GA ++ ++ L + LI + +N+A+GF
Sbjct: 160 NPNP-------SVGASGAIFGLIGALIAFYLVARRVLGGIARQQLGSLIFITLINLALGF 212
Query: 175 -MPGIDNMAHI 184
P IDN AHI
Sbjct: 213 TTPYIDNNAHI 223
>gi|416361193|ref|ZP_11682501.1| rhomboid family membrane protein [Clostridium botulinum C str.
Stockholm]
gi|338194390|gb|EGO86853.1| rhomboid family membrane protein [Clostridium botulinum C str.
Stockholm]
Length = 200
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G + N +V G+ YR +CM+LH ++HL+ N A+ +G +E+ +G + ++Y+L G
Sbjct: 50 GANENTLVASGQYYRLITCMFLHGGLMHLILNMYALNALGPIIEKSYGKNKYIIIYLLGG 109
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
+ S + + +S+GASGA+F LLGA L I ++ +I +I VI
Sbjct: 110 LISSISSFIFSN------GVSIGASGAIFSLLGAILVLTIKMRSVVGKD--TIKNVISVI 161
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGILLGFIL 197
VN+ IG +P IDN AH+GG + G+ L +L
Sbjct: 162 VVNIFIGLAIPNIDNFAHVGGLLGGVFLSILL 193
>gi|313235558|emb|CBY11013.1| unnamed protein product [Oikopleura dioica]
Length = 840
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 5/141 (3%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+IYR +++HA ++HL + + LE+ G+ RI +Y+LSG G L S +
Sbjct: 606 QIYRLHLSLFIHAGILHLCITLFFQMVVLRDLEKLAGWWRIASIYILSGMVGNLASAIFV 665
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG SGA +GL+ E I +W L ++ L ++ G +P
Sbjct: 666 -----PYKPDVGPSGAQYGLIACLFVEFIQSWQLLDQPWHAVLKLAVIAIFLFLFGLLPW 720
Query: 178 IDNMAHIGGFVAGILLGFILL 198
+DN AHI GF++GILL F LL
Sbjct: 721 VDNYAHIFGFISGILLSFALL 741
>gi|268319881|ref|YP_003293537.1| hypothetical protein FI9785_1410 [Lactobacillus johnsonii FI9785]
gi|262398256|emb|CAX67270.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
Length = 228
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 90/167 (53%), Gaps = 8/167 (4%)
Query: 33 SLFGPSTAT--LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
++ G ST L +LG ++ LV + +R F+ +LH +H+ +N++ I ++G +E
Sbjct: 30 TMMGGSTNINILVRLGAMNNQLVTVGHQWWRLFTAQFLHIGWLHIASNAVMIYYMGQFME 89
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
G R +Y+LSG GG LLS + +S +S GAS ALFGL G ++ + N
Sbjct: 90 PLLGHWRFLTVYLLSGIGGNLLSYAYVSDS----VVSAGASTALFGLFGVVIALYLANRA 145
Query: 151 LYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFI 196
+ + L L I +N+A+ F ID + H+GG ++G LLG I
Sbjct: 146 IPAINYLGRQALALAI-INLALDLFASHIDILGHLGGLISGFLLGII 191
>gi|149054866|gb|EDM06683.1| rhomboid, veinlet-like 6 (Drosophila) (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 595
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 392 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 451
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 452 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPW 506
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 507 IDNIAHIFGFLSGMLLAFAFL----------PYITFGTSDRYRK 540
>gi|400602302|gb|EJP69904.1| rhomboid family protein [Beauveria bassiana ARSEF 2860]
Length = 517
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
YRF +++HA +IH+ N L L + ++E+ G +R L+Y+ +G G ++
Sbjct: 283 YRFIIPIFMHAGIIHIGFNLLLQLTVAKEMEQAIGSIRFFLVYMSAGIFGFVMG----GN 338
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
S GASG+LFG++ +L +++ +W+ + + +I+ + + +G +PG+D
Sbjct: 339 FAAPGIASTGASGSLFGIIALTLLDLLYSWSERRSPVKDLMFIIVDMVIAFVLGLLPGLD 398
Query: 180 NMAHIGGFVAGILLGFILLLRP 201
N +HIGGF+ G+ LG +L P
Sbjct: 399 NFSHIGGFLMGLALGICVLHSP 420
>gi|163846340|ref|YP_001634384.1| rhomboid family protein [Chloroflexus aurantiacus J-10-fl]
gi|222524105|ref|YP_002568576.1| rhomboid family protein [Chloroflexus sp. Y-400-fl]
gi|163667629|gb|ABY33995.1| Rhomboid family protein [Chloroflexus aurantiacus J-10-fl]
gi|222447984|gb|ACM52250.1| Rhomboid family protein [Chloroflexus sp. Y-400-fl]
Length = 271
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 89/179 (49%), Gaps = 22/179 (12%)
Query: 31 ENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
S F P+ L LG N + DGE++R + ++LHAN+IH+ N A+ +G + E
Sbjct: 65 SGSFFQPAFPVLAVLGA-KINERIADGELWRLLTAVFLHANLIHIFFNGYALSVLGPETE 123
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
+G R LY++SG GG + S +VGASGA+FGL+G
Sbjct: 124 RFYGHGRFLALYLISGLGGSIASYALSPAP------AVGASGAIFGLIGG------LGVF 171
Query: 151 LYTNKCV-------SITMLILVIGVNMAIGFMPG--IDNMAHIGGFVAGILLGFILLLR 200
Y N+ V + ++ + +N+ IGF IDN H+GG ++GI++G L R
Sbjct: 172 YYLNRRVLGEFGQNQVRGIVAIALINLLIGFAAQGVIDNWGHLGGLLSGIVIGVALAPR 230
>gi|223043140|ref|ZP_03613187.1| rhomboid family protein [Staphylococcus capitis SK14]
gi|417907800|ref|ZP_12551567.1| peptidase, S54 family [Staphylococcus capitis VCU116]
gi|222443351|gb|EEE49449.1| rhomboid family protein [Staphylococcus capitis SK14]
gi|341594887|gb|EGS37565.1| peptidase, S54 family [Staphylococcus capitis VCU116]
Length = 487
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIVGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y +SG G +S S T ISVGASGA+FGL+G+ + + + T ++ V
Sbjct: 241 MLVIYFVSGLFGNFVSL-----SFNTSTISVGASGAIFGLIGSIFAIMYLSKTF--DRKV 293
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+LI ++ + FM I+ MAH+GGF+ G+L+ I
Sbjct: 294 IGQLLIALLILICLSLFMSNINIMAHLGGFIGGLLITLI 332
>gi|148544432|ref|YP_001271802.1| rhomboid family protein [Lactobacillus reuteri DSM 20016]
gi|184153796|ref|YP_001842137.1| hypothetical protein LAR_1141 [Lactobacillus reuteri JCM 1112]
gi|227363140|ref|ZP_03847275.1| S54 family peptidase [Lactobacillus reuteri MM2-3]
gi|325682754|ref|ZP_08162270.1| S54 family peptidase [Lactobacillus reuteri MM4-1A]
gi|148531466|gb|ABQ83465.1| Rhomboid family protein [Lactobacillus reuteri DSM 20016]
gi|183225140|dbj|BAG25657.1| conserved hypothetical protein [Lactobacillus reuteri JCM 1112]
gi|227071858|gb|EEI10146.1| S54 family peptidase [Lactobacillus reuteri MM2-3]
gi|324977104|gb|EGC14055.1| S54 family peptidase [Lactobacillus reuteri MM4-1A]
Length = 219
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/161 (34%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+T TL +G S L+ +GE +R S ++LH + HL+ NS+ +L+IG +EE FG R
Sbjct: 34 NTVTLLNMGARSTPLI-REGEWWRLVSPVFLHVGLSHLVVNSVTLLYIGRYIEEFFGHWR 92
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y +S G S + + IS GAS A+FGL GA L + + +
Sbjct: 93 MVVIYFVSALFGNFTSAVFMPST-----ISAGASTAIFGLFGAFLMLGVCFRHNVIVRVL 147
Query: 158 SITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFIL 197
S T L+ VI +N+ + F+ G+D + HIGG G + FI+
Sbjct: 148 SRTFLLFVI-INIVMDFFLSGVDLIGHIGGLFGGFFIAFIV 187
>gi|407045142|gb|EKE43034.1| peptidase S54 (rhomboid) family protein, partial [Entamoeba
nuttalli P19]
Length = 330
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 7/172 (4%)
Query: 26 FQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFI 85
F+ S N + GP++ + LG + + + +++R + ++LH +IHLL N L +
Sbjct: 114 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLLCNLTMQLRL 173
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
G+ +E + R ++Y +SG G S + Q S I VGASG+L G+ G + +I
Sbjct: 174 GMIIERRWNSFRFLIVYFVSGIIGNCFSIICQPTS-----IGVGASGSLLGIFGGFVVDI 228
Query: 146 ITNWTLYTNKC--VSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGF 195
I N + N+ I L++ I + F PGID AH+ GF+ G + F
Sbjct: 229 IINKNKFENRVWLSLIGRLMISIIIIFVFSFAPGIDYSAHVFGFMGGAICAF 280
>gi|314933721|ref|ZP_07841086.1| rhomboid family protein [Staphylococcus caprae C87]
gi|313653871|gb|EFS17628.1| rhomboid family protein [Staphylococcus caprae C87]
Length = 487
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 89/159 (55%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L ++GGL VV+ GE YR S M+LH N H+L N L++ G +E G R
Sbjct: 182 SDVKLLEVGGLVHFNVVH-GEWYRLISSMFLHFNFEHILMNMLSLFIFGKIVESIVGSWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y +SG G +S S T ISVGASGA+FGL+G+ + + + T ++ V
Sbjct: 241 MLVIYFVSGLFGNFVSL-----SFNTSTISVGASGAIFGLIGSIFAIMYLSKTF--DRKV 293
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+LI ++ + FM I+ MAH+GGF+ G+L+ I
Sbjct: 294 IGQLLIALLILICLSLFMSNINIMAHLGGFIGGLLITLI 332
>gi|295706593|ref|YP_003599668.1| membrane endopeptidase [Bacillus megaterium DSM 319]
gi|294804252|gb|ADF41318.1| membrane endopeptidase [Bacillus megaterium DSM 319]
Length = 506
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ +GE +RFF+ + LH ++HLL NS+A+ ++G +E +G R +Y+ +G
Sbjct: 211 GAKYNPLIMEGEWWRFFTPIILHIGLLHLLMNSVALYYLGTLVERIYGSGRFVFIYIFAG 270
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
F G L S + IS GASGA+FG GA L TN + S ++I+VI
Sbjct: 271 FAGSLGSFIW------NTSISAGASGAIFGCFGALLFLARTNPRFFFRTMGSSFIVIIVI 324
Query: 167 GVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
N+ GF+ P +DN HIGG V G L I+ L Q
Sbjct: 325 --NLIFGFVAPNVDNAGHIGGLVGGFLAASIVSLPKQ 359
>gi|21595108|gb|AAH31398.1| Rhbdf2 protein, partial [Mus musculus]
Length = 607
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 92/193 (47%), Gaps = 18/193 (9%)
Query: 31 ENSLFGPSTATLKKLGGLSR--NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVK 88
E++ L K+ GL N V D + YR + ++LHA ++H L + + + I
Sbjct: 376 EDATLCSQVHCLDKVCGLLPFLNPEVPD-QFYRIWLSLFLHAGIVHCLVSVVFQMTILRD 434
Query: 89 LEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITN 148
LE+ G+ RI ++++LSG G L S + + VG +G+ FGLL E+ +
Sbjct: 435 LEKLAGWHRISIIFILSGITGNLASAIFL-----PYRAEVGPAGSQFGLLACLFVELFQS 489
Query: 149 WTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSG 208
W L + L ++ G +P IDN+AHI GF++G+LL F L
Sbjct: 490 WQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIAHIFGFLSGMLLAFAFL---------- 539
Query: 209 PYIAPGYELNHKK 221
PYI G ++K
Sbjct: 540 PYITFGTSDKYRK 552
>gi|374374022|ref|ZP_09631681.1| Peptidase S54, rhomboid domain [Niabella soli DSM 19437]
gi|373233464|gb|EHP53258.1| Peptidase S54, rhomboid domain [Niabella soli DSM 19437]
Length = 490
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 6/147 (4%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
P +L G R + + +G+ +R + +LH + HLL N A+L+IGV LE G
Sbjct: 180 PDNESLLNWGANFRPITL-EGQWWRLLTNCFLHVGIFHLLLNMYALLYIGVLLEPLLGRT 238
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
R Y+L+G + S D L IS GASGA+FG+ G L+ + TN T +
Sbjct: 239 RFISAYLLTGITASITSLWWHD-----LTISAGASGAIFGMYGVFLAMLTTNLIEKTARK 293
Query: 157 VSITMLILVIGVNMAIGFMPGIDNMAH 183
+T + + +G N+ G GIDN AH
Sbjct: 294 PLLTSIAVFVGYNLIYGLKGGIDNAAH 320
>gi|241859201|ref|XP_002416189.1| rhomboid, putative [Ixodes scapularis]
gi|215510403|gb|EEC19856.1| rhomboid, putative [Ixodes scapularis]
Length = 496
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR ++ ++LHA + HL + LF+ LE+ G +R ++Y+ SG G L S +
Sbjct: 290 QFYRLWTSLFLHAGIFHLCITVIVQLFVMRDLEKLAGPVRTAVIYMCSGVAGNLASAIFV 349
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +GA FGLL E+I W + ++ L V +G +P
Sbjct: 350 -----PYRAEVGPAGAQFGLLACLFVEVIHCWQMLRRPSSALLKLGGGAAVLFLLGLLPW 404
Query: 178 IDNMAHIGGFVAGILLGFILL 198
+DN AH+ GFV G LL + LL
Sbjct: 405 VDNYAHVFGFVFGFLLSYALL 425
>gi|71066210|ref|YP_264937.1| rhomboid family protein [Psychrobacter arcticus 273-4]
gi|71039195|gb|AAZ19503.1| possible rhomboid family protein [Psychrobacter arcticus 273-4]
Length = 376
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 20/204 (9%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
PST L K G + + D E +R S +LH ++HLL N A+ F G E FG L
Sbjct: 37 PSTEALIKWGANALPFTM-DNEPWRLVSSAFLHIGLMHLLFNGFAMYFFGQIAEPMFGSL 95
Query: 97 RIGLLYVLSGFGGGLLS--CLHQDESQQTLQ--ISVGASGALFG----LLGASLSEIITN 148
+ L++L+ GG LL+ Q T Q +S GASG + G LL A+L +I N
Sbjct: 96 KFLTLFLLAAIGGNLLNNYVTWQGIVDGTGQAGLSAGASGGIMGIGAALLIAALFKISVN 155
Query: 149 WTLYTNKCVSITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVS 207
+++ LI ++G+N+ GF +PGIDN HIGG + G+++ + + +
Sbjct: 156 -----GMVLNLKSLIFIMGINLVYGFAVPGIDNAGHIGGAITGLIIALAFAIAHRQSMAA 210
Query: 208 GPYIAPGYELNHKK--PKYQCHQK 229
+ +N P YQ Q+
Sbjct: 211 ---VIQNTAINQIDYLPHYQSEQQ 231
>gi|440302909|gb|ELP95215.1| hypothetical protein EIN_430110 [Entamoeba invadens IP1]
Length = 335
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 86/175 (49%), Gaps = 7/175 (4%)
Query: 26 FQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFI 85
F+ S N + GP++ + LG + E++R + ++LHA +IHL+ N L +
Sbjct: 123 FEKPSINWMLGPTSDAMDILGAKDAKKMKEQYELWRLITPIFLHAGIIHLVCNLSMQLRL 182
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
G+ +E LR ++Y + G G S + +Q VGASGAL + G L +I
Sbjct: 183 GMIIERRMNTLRFLIVYFVGGIIGNCFSVMIFPTTQ-----GVGASGALLAVFGGFLIDI 237
Query: 146 ITNWTLYTNK--CVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
I N + ++ I L++ + + FMPGID AHI GF+ G + LL
Sbjct: 238 ILNKNKFPSRQWISLIGQLLISTIIIFVLSFMPGIDYAAHIFGFIGGAVAALGLL 292
>gi|227889556|ref|ZP_04007361.1| S54 family peptidase [Lactobacillus johnsonii ATCC 33200]
gi|227849858|gb|EEJ59944.1| S54 family peptidase [Lactobacillus johnsonii ATCC 33200]
Length = 228
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 8/167 (4%)
Query: 33 SLFGPSTAT--LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
++ G ST L +LG ++ LV + + +R F+ +LH +H+ +N++ I ++G +E
Sbjct: 30 TMMGGSTNINILVRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYMGQFME 89
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
G R +Y+LSG GG LLS + +S +S GAS ALFGL G ++ + N
Sbjct: 90 PLLGHWRFLTVYLLSGIGGNLLSYAYGSDS----VVSAGASTALFGLFGVVIALYLANRA 145
Query: 151 LYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFI 196
+ + L L I +N+A+ F+ I+ + H+GG ++G LLG I
Sbjct: 146 IPAINYLGKQALTLAI-INLALDLFVSHINILGHLGGLISGFLLGII 191
>gi|345312945|ref|XP_003429322.1| PREDICTED: inactive rhomboid protein 1-like, partial
[Ornithorhynchus anatinus]
Length = 599
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 396 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRISIIYLLSGVTGNLASAIFL 455
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 456 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 510
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AHI GF++G L F L PYI+ G ++L K+
Sbjct: 511 IDNFAHISGFISGFFLSFAFL----------PYISFGRFDLYRKR 545
>gi|397576168|gb|EJK50102.1| hypothetical protein THAOC_30966 [Thalassiosira oceanica]
Length = 527
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 88/158 (55%), Gaps = 8/158 (5%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L G +L++ +++R + ++LH + HL++NS ++ +G +E FG R
Sbjct: 228 LTAWGAKRSDLLLEGRQLHRLITPVFLHGGIGHLVSNSYSLKSMGNNVEGAFGPARTLAT 287
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT- 160
Y++SG G + S ++ + +VGASGA+FGL+GA + + N ++ + +
Sbjct: 288 YLVSGVAGNIFSAVN------SPNPAVGASGAIFGLVGAYYTFLARNSEIFGHSGRAQKG 341
Query: 161 MLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFIL 197
L+ IG+N+ +G P IDN H+GGF+ G+ + +++
Sbjct: 342 ALLETIGINLVLGMTNPVIDNWGHLGGFIGGVGMSWLI 379
>gi|167748326|ref|ZP_02420453.1| hypothetical protein ANACAC_03070 [Anaerostipes caccae DSM 14662]
gi|167652318|gb|EDR96447.1| peptidase, S54 family [Anaerostipes caccae DSM 14662]
Length = 280
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 88/176 (50%), Gaps = 13/176 (7%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
L+ ++ + G L+ GE+YR + +LH HL N + + IG +LE F
Sbjct: 112 LWSAASTEILNWGALTWMHAFKQGELYRLVTSNFLHNGFDHLFNNMIVFVLIGSRLEPIF 171
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R LY+ +G G ++S ++ + + SVGASGA+FGL+GA L W L
Sbjct: 172 GRARYVALYMGAGLCGSIVSAVYYMNMGEMVA-SVGASGAIFGLIGAML------WILIK 224
Query: 154 NKCVSITM----LILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRPQYG 204
N+ + L+I ++ GF G+DN AHIGG + G LL ILL R G
Sbjct: 225 NRGYQKEFYGGGVALMIAGSLYHGFSTMGVDNAAHIGGCIGGFLLA-ILLYRQDRG 279
>gi|291540429|emb|CBL13540.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Roseburia intestinalis XB6B4]
Length = 348
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 86/153 (56%), Gaps = 4/153 (2%)
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
GG+ + + + +R F+ M++H + HL+ N + +G +LE G ++ ++Y+LS
Sbjct: 191 GGMYPEFIQINHQWWRIFTAMFIHFGLPHLVNNMVIFCCVGSRLERAAGHFKMFVIYMLS 250
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G GGGLLS S +S GASGA+FG +G + +I + + K +++ +IL+
Sbjct: 251 GIGGGLLSYFMMLYSGD-YAVSAGASGAVFGTIGGLIWVVIRHRGRF--KGLTVKGMILM 307
Query: 166 IGVNMAIGFMP-GIDNMAHIGGFVAGILLGFIL 197
+++ GF GIDN H+GG + G L+ IL
Sbjct: 308 AVLSLYYGFSTIGIDNWCHVGGILTGFLVAMIL 340
>gi|429764176|ref|ZP_19296501.1| peptidase, S54 family [Clostridium celatum DSM 1785]
gi|429188574|gb|EKY29452.1| peptidase, S54 family [Clostridium celatum DSM 1785]
Length = 324
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 83/154 (53%), Gaps = 11/154 (7%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ G+++R +C +LH + H+ N A+ IG ++E +G ++ L+Y+ S
Sbjct: 173 GAKVNELINHGQVWRLITCTFLHGGLAHIAFNMYALKIIGSEVEFAYGKIKYILIYLFSA 232
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
GG + S + S ISVGASGA+FGL GA L + N K I + +VI
Sbjct: 233 LGGSIFSYIFSPNS-----ISVGASGAIFGLFGAMLVFGVKNRHR-IGKNYVINLFKVVI 286
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLL 199
+N+ IG + IDN HIGG VAG G I LL
Sbjct: 287 -INIFIGVTISNIDNAGHIGGLVAG---GIIALL 316
>gi|195386234|ref|XP_002051809.1| GJ10319 [Drosophila virilis]
gi|194148266|gb|EDW63964.1| GJ10319 [Drosophila virilis]
Length = 246
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 85/163 (52%), Gaps = 14/163 (8%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E +RFF+ M LHA+ HL N FIGV LE + G R+G++Y+ G G L + Q
Sbjct: 86 EYWRFFTYMLLHADTWHLWINMCLQCFIGVWLELEQGHWRVGVVYITGGICGALANAWLQ 145
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM-- 175
E +GAS ++ LL + + ++ N++ +++ + I +L+++ N+A
Sbjct: 146 PELSL-----LGASAGVYALLCSHVPHLVLNFSQLSHRFLRIAILLILFVSNVAFTIFHY 200
Query: 176 -------PGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYI 211
P I AH+GG VAG+L GF++ R Q GP++
Sbjct: 201 CINHNLNPRISLEAHLGGGVAGLLSGFLVYRRWQRLDSLGPHM 243
>gi|418476663|ref|ZP_13045815.1| hypothetical protein SMCF_8893 [Streptomyces coelicoflavus ZG0656]
gi|371542672|gb|EHN71698.1| hypothetical protein SMCF_8893 [Streptomyces coelicoflavus ZG0656]
Length = 297
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 12/150 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +G+ YR + M+LH +H+L N L++ ++G LE G R LY SG G L+
Sbjct: 129 VAEGQWYRLLTAMFLHTGYMHILFNMLSLWWLGGPLEGALGRARYLALYFCSGLAGSALT 188
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L + +Q +L GASGA+FGL GA+ TL + +++++ +N+
Sbjct: 189 YLIAEPNQPSL----GASGAIFGLFGATA-------TLVRRLNADMRPVVILLAINLVFT 237
Query: 174 FM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
F I AH+GG VAG ++G+ +L P+
Sbjct: 238 FTWANIAWQAHVGGLVAGAVIGYAMLHAPR 267
>gi|358055893|dbj|GAA98238.1| hypothetical protein E5Q_04921 [Mixia osmundae IAM 14324]
Length = 1646
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Query: 32 NSLFGPSTA--TLKKLGGLSRNLVVYDGEI----YRFFSCMWLHANVIHLLTNSLAILFI 85
N+ P+T+ +L+++ G +DG++ +RF +++HA ++H+ N L +
Sbjct: 1382 NNTANPATSLCSLEQICGFGG----FDGKVPNQGFRFVLPIFVHAGLVHIALNLLVQVTS 1437
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
++E G LR LLY +G G +L SVGASGA++G + ++
Sbjct: 1438 SAEVERQMGSLRFFLLYFPAGIFGFILG----GNFALVGLPSVGASGAIYGTHASVFVDL 1493
Query: 146 ITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
+ +W L + + L++ I + +G++PG+DN +HIGGF G+ +L
Sbjct: 1494 VAHWRLEPSPRKKLFFLLIEIILGFGLGYVPGVDNFSHIGGFAMGLTCSILL 1545
>gi|358055892|dbj|GAA98237.1| hypothetical protein E5Q_04920 [Mixia osmundae IAM 14324]
Length = 1648
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/172 (27%), Positives = 89/172 (51%), Gaps = 14/172 (8%)
Query: 32 NSLFGPSTA--TLKKLGGLSRNLVVYDGEI----YRFFSCMWLHANVIHLLTNSLAILFI 85
N+ P+T+ +L+++ G +DG++ +RF +++HA ++H+ N L +
Sbjct: 1384 NNTANPATSLCSLEQICGFGG----FDGKVPNQGFRFVLPIFVHAGLVHIALNLLVQVTS 1439
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
++E G LR LLY +G G +L SVGASGA++G + ++
Sbjct: 1440 SAEVERQMGSLRFFLLYFPAGIFGFILG----GNFALVGLPSVGASGAIYGTHASVFVDL 1495
Query: 146 ITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
+ +W L + + L++ I + +G++PG+DN +HIGGF G+ +L
Sbjct: 1496 VAHWRLEPSPRKKLFFLLIEIILGFGLGYVPGVDNFSHIGGFAMGLTCSILL 1547
>gi|384044908|ref|YP_005492925.1| serine protease of Rhomboid family, contains TPR repeats [Bacillus
megaterium WSH-002]
gi|345442599|gb|AEN87616.1| Serine protease of Rhomboid family, contains TPR repeats [Bacillus
megaterium WSH-002]
Length = 481
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 86/157 (54%), Gaps = 9/157 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ +GE +RFF+ + LH ++HLL NS+A+ ++G +E +G R +Y+ +G
Sbjct: 186 GAKYNPLIMEGEWWRFFTPIILHIGLLHLLMNSVALYYLGTLVERIYGSGRFVFIYIFAG 245
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
F G L S + IS GASGA+FG GA L TN + S ++I+VI
Sbjct: 246 FAGSLGSFIW------NTSISAGASGAIFGCFGALLFIARTNPRFFFRTMGSSFIVIIVI 299
Query: 167 GVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
N+ GF+ P +DN HIGG V G L I+ L Q
Sbjct: 300 --NLIFGFVAPNVDNAGHIGGLVGGFLAASIVSLPKQ 334
>gi|345022094|ref|ZP_08785707.1| hypothetical protein OTW25_12319 [Ornithinibacillus scapharcae
TW25]
Length = 517
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 16/161 (9%)
Query: 36 GPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGF 95
S TL + G N ++ DGE +R + M+LH + H ++N L + + G E+ +G
Sbjct: 207 SESNETLIEYGA-KFNPLILDGEWWRVVTSMFLHIGLFHFISNMLFLYYFGSLAEKIYGS 265
Query: 96 LRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK 155
LR +Y+L+G G + S +S GASGAL+GL GA + + L+ K
Sbjct: 266 LRFFFIYMLAGIAGSVASFAF------VTNLSAGASGALYGLFGAFIY-----FGLFHKK 314
Query: 156 CVSITM---LILVIGVNMAIGF-MPGIDNMAHIGGFVAGIL 192
T+ +++++G+N+ +GF +P +D AH+GG VAG +
Sbjct: 315 IFFRTIGKDILMLLGINIVLGFVLPQLDVTAHMGGLVAGFI 355
>gi|225386984|ref|ZP_03756748.1| hypothetical protein CLOSTASPAR_00734 [Clostridium asparagiforme
DSM 15981]
gi|225046996|gb|EEG57242.1| hypothetical protein CLOSTASPAR_00734 [Clostridium asparagiforme
DSM 15981]
Length = 193
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 93/180 (51%), Gaps = 10/180 (5%)
Query: 24 FSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAIL 83
Q +EN+ F + G + LVV G+ YR + +++H V HLL N L +
Sbjct: 16 LELQGSTENAGF------MLAHGAMFAPLVVDHGQYYRLVTSVFMHFGVSHLLNNMLVLF 69
Query: 84 FIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLS 143
+G LE G ++ + Y+L G G L+S + + +L + GASGA+FG++G +
Sbjct: 70 VLGDNLERALGHVKYLIFYLLCGVGANLVS-MTVNLMTGSLSVGAGASGAIFGVVGGLVY 128
Query: 144 EIITNWTLYTNKCVSITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRPQ 202
+ N + ++ L ++I + + GF IDN AHIGG AGILLG +L +P+
Sbjct: 129 AVGVNRGRLED--LTSRQLGVMILLTLYHGFTSMNIDNAAHIGGLAAGILLGILLYRKPR 186
>gi|198419227|ref|XP_002124734.1| PREDICTED: similar to rhomboid-related protein 2 [Ciona
intestinalis]
Length = 295
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 19/165 (11%)
Query: 46 GGLSRNLVVYD----GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
GL+++ ++YD E++RF S M+LHA + H+L N + L G+ LE R+ ++
Sbjct: 94 SGLTKSPLIYDPMHREEVWRFISYMFLHAGIEHILGNVVLQLLFGLPLEMVHKSYRVAIV 153
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y+ G L S + VGASG ++ LLG LS +ITNW+ + + +
Sbjct: 154 YISGVLAGSLASSIFD-----PFVYLVGASGGVYALLGGYLSNVITNWSRLAFNGLHLLL 208
Query: 162 LILVIGVNMAI----------GFMPGIDNMAHIGGFVAGILLGFI 196
+++++GV++ G P + +AH+ G +AG+ +G++
Sbjct: 209 VVIIVGVDLGFSIYRRVVVVEGGSPPVSLVAHLAGGLAGVTIGYV 253
>gi|399220330|ref|NP_001100537.2| rhomboid family member 2 [Rattus norvegicus]
gi|399220332|ref|NP_001257763.1| rhomboid family member 2 [Rattus norvegicus]
Length = 825
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 622 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 681
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 682 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPW 736
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 737 IDNIAHIFGFLSGMLLAFAFL----------PYITFGTSDRYRK 770
>gi|308068481|ref|YP_003870086.1| hypothetical protein PPE_01711 [Paenibacillus polymyxa E681]
gi|305857760|gb|ADM69548.1| Uncharacterized membrane protein [Paenibacillus polymyxa E681]
Length = 207
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 82/157 (52%), Gaps = 3/157 (1%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
S+ TL + G L N + +++R+ S M+LHA HLL NS AIL LE G
Sbjct: 40 ESSLTLIRYGALI-NEAPFTDQLWRYVSAMFLHAGFDHLLFNSFAILVFAPPLERLLGSF 98
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
R LLY+++G G +LS H + +T +SVGASGA++G+ GA L + +L +
Sbjct: 99 RYVLLYLVTGIVGNILSIAHYNMMTET-TVSVGASGAIYGIYGAFLYVALFQRSLMDDAS 157
Query: 157 VSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
+L G+ + + I+ AH GG ++G L
Sbjct: 158 RKTLYTLLGFGILFSFA-VANINWTAHFGGLLSGFFL 193
>gi|264681541|ref|NP_766160.2| inactive rhomboid protein 2 [Mus musculus]
gi|264681547|ref|NP_001161152.1| inactive rhomboid protein 2 [Mus musculus]
gi|81873327|sp|Q80WQ6.1|RHDF2_MOUSE RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid family member 2; AltName: Full=Rhomboid
veinlet-like protein 6; AltName: Full=Rhomboid-related
protein
gi|30354647|gb|AAH52182.1| Rhomboid 5 homolog 2 (Drosophila) [Mus musculus]
gi|37726547|gb|AAO34122.1| rhomboid-related protein [Mus musculus]
gi|148702639|gb|EDL34586.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_a [Mus musculus]
Length = 827
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
N V D + YR + ++LHA ++H L + + + I LE+ G+ RI ++++LSG G
Sbjct: 618 NPEVPD-QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGN 676
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
L S + + VG +G+ FGLL E+ +W L + L ++
Sbjct: 677 LASAIFL-----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLF 731
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
G +P IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 732 ICGLLPWIDNIAHIFGFLSGMLLAFAFL----------PYITFGTSDKYRK 772
>gi|18310434|ref|NP_562368.1| rhomboid family protein [Clostridium perfringens str. 13]
gi|18145114|dbj|BAB81158.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 342
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
+G N +++ GE YR + M+LH ++HLL N A+ +G +E +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SG + S + + VGASGA+FGLLGA+L N K + +T +I+
Sbjct: 249 SGIVASIFSLYF------SPVMGVGASGAIFGLLGAALV-FAYNEKDRIGKAL-VTNIIV 300
Query: 165 VIGVNMAIGF-MPGIDNMAHIGGFVAGILLG 194
+I +N+ IG M ID A GGF+AG +LG
Sbjct: 301 IILLNVFIGLSMSNIDISARFGGFIAGAILG 331
>gi|82703577|ref|YP_413143.1| rhomboid-like protein [Nitrosospira multiformis ATCC 25196]
gi|82411642|gb|ABB75751.1| Rhomboid-like protein [Nitrosospira multiformis ATCC 25196]
Length = 371
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 78/160 (48%), Gaps = 22/160 (13%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
DGE +R + M+LH ++HL N A+ G +E +G R LY SG G LL
Sbjct: 57 ATQDGEWWRLGTAMFLHFGLVHLTLNLWALWDAGQLVERMYGHARFTALYFASGLAGNLL 116
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGA----------SLSEIITNWTLYTNKCVSITML 162
S + + + L IS GASGA+FGL GA L W + +I L
Sbjct: 117 SLV----AHKGLAISGGASGAIFGLYGALLVFLWRERGRLHPHEFRWFFWGATAFAIVSL 172
Query: 163 ILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
G+ +AI GIDN AHIGGFV G LLG I+ P+
Sbjct: 173 ----GLGLAIT---GIDNAAHIGGFVTG-LLGGIVFANPR 204
>gi|260665468|ref|ZP_05866315.1| membrane-associated serine protease [Lactobacillus jensenii
SJ-7A-US]
gi|260560736|gb|EEX26713.1| membrane-associated serine protease [Lactobacillus jensenii
SJ-7A-US]
Length = 215
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 94/182 (51%), Gaps = 8/182 (4%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+A L KLG ++ G+ +R F+ +LH ++HL+ N + + ++G LE G +R
Sbjct: 24 ESAVLFKLGAQFNPAIIILGQWWRLFTAQFLHIGLLHLVVNCVTLFYMGQYLEPMLGHVR 83
Query: 98 IGLLYVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
++Y+L+G GG L++ L D + +S GAS ALFGL GA ++ I N T
Sbjct: 84 FLIIYLLAGVGGNLMTLALGSDNA-----VSAGASTALFGLFGAMIALGIANRTHEGMAY 138
Query: 157 VSITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGY 215
+ +L + +N+ +P ID H+GG +AG LL IL + GY I G+
Sbjct: 139 LGRQSFVLAV-INLLFDINIPQIDTWGHVGGLLAGFLLTVILGDQNLRGYKLPIKILAGF 197
Query: 216 EL 217
L
Sbjct: 198 AL 199
>gi|126308402|ref|XP_001368925.1| PREDICTED: rhomboid family member 2-like isoform 1 [Monodelphis
domestica]
Length = 827
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA + H L + L + I LE+ G+ RI ++++LSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGLGHCLVSVLFQMTILRDLEKLAGWHRIAIIFILSGITGNLASTIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+I +W L N + L ++ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELIQSWQLLENPWKAFLNLSGIVFFLFICGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILL 198
IDN+AHI GF++G+LL F L
Sbjct: 739 IDNIAHIFGFLSGLLLSFAFL 759
>gi|395825880|ref|XP_003786148.1| PREDICTED: inactive rhomboid protein 2 [Otolemur garnettii]
Length = 829
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 80/164 (48%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 626 QFYRLWLSLFLHAGVVHCFVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 685
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 686 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPW 740
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 741 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 774
>gi|301769557|ref|XP_002920196.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid family member 1-like
[Ailuropoda melanoleuca]
Length = 855
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 655 RLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL--- 711
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
+ VG +G+ FG+L E+ +W + + L V+ G +P IDN
Sbjct: 712 --PYRAEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLPWIDN 769
Query: 181 MAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
AHI GF++G+ L F L PYI+ G ++L K+
Sbjct: 770 FAHISGFISGLFLSFAFL----------PYISFGKFDLYRKR 801
>gi|432843050|ref|XP_004065559.1| PREDICTED: inactive rhomboid protein 2-like [Oryzias latipes]
Length = 821
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 79/148 (53%), Gaps = 6/148 (4%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
N + D ++YR + ++LHA ++H + + + + I LE+ G+ RI ++Y+LSG G
Sbjct: 608 NPAIPD-QVYRLWLSLFLHAGLLHCVVSVVFQMTILRDLEKLAGWGRISVIYILSGITGN 666
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
L S L + VG +G+ FGLL E+I W + + L+ ++
Sbjct: 667 LASALFL-----PYRAEVGPAGSQFGLLACLFVELIQGWQILEKPWKAFLKLLGIVVFLF 721
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFILL 198
G +P IDN+AHI GF++G+LL F L
Sbjct: 722 LCGLLPWIDNIAHIFGFLSGLLLSFAFL 749
>gi|294827768|ref|NP_711133.2| intramembrane serine protease [Leptospira interrogans serovar Lai
str. 56601]
gi|386073248|ref|YP_005987565.1| intramembrane serine protease [Leptospira interrogans serovar Lai
str. IPAV]
gi|293385613|gb|AAN48151.2| intramembrane serine protease [Leptospira interrogans serovar Lai
str. 56601]
gi|353457037|gb|AER01582.1| intramembrane serine protease [Leptospira interrogans serovar Lai
str. IPAV]
Length = 226
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/170 (33%), Positives = 86/170 (50%), Gaps = 9/170 (5%)
Query: 35 FGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
F P +L + G +R + G+ +R +++HA HL N ++ + +E G
Sbjct: 63 FYPDGPSLLEWGA-NRRIETLAGQWWRLLINVFVHAGFPHLFFNGFGLIISAIFVELILG 121
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
+R +LY+ SG G L S + + ISVGASGA+FGL GA L ++ + +
Sbjct: 122 RIRFLILYIFSGLCGSLASIVWYPNT-----ISVGASGAIFGLYGAILGLVLMDAFPRDD 176
Query: 155 KCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
K + M++ I + G GIDN AHIGG V+G L G IL Q+G
Sbjct: 177 KKNVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 223
>gi|156041048|ref|XP_001587510.1| hypothetical protein SS1G_11502 [Sclerotinia sclerotiorum 1980]
gi|154695886|gb|EDN95624.1| hypothetical protein SS1G_11502 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 469
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 80/142 (56%), Gaps = 4/142 (2%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
YRF M+LHA +IH+ N L + +G ++E G +R L+Y+ SG G +L
Sbjct: 287 YRFILPMFLHAGIIHIGFNMLLQMTMGKEMEILIGPIRYFLVYISSGIFGFILGG----N 342
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
T S GASGALFGL+ +L +++ W + + ++L + ++ +G +PG+D
Sbjct: 343 FAATGISSTGASGALFGLIALTLLDLLYKWKERVSPMKELAFILLDVIISFVLGLLPGLD 402
Query: 180 NMAHIGGFVAGILLGFILLLRP 201
N +HIGGF+ G +LG +L P
Sbjct: 403 NFSHIGGFLMGFVLGLSILRSP 424
>gi|240103462|ref|YP_002959771.1| peptidase [Thermococcus gammatolerans EJ3]
gi|239911016|gb|ACS33907.1| Peptidase, putative, Rhomboid-like protein protein [Thermococcus
gammatolerans EJ3]
Length = 207
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 11/173 (6%)
Query: 24 FSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAIL 83
+ ++ +S+ GPS L KL L LV E +R F+ M++H + IHL N+ ++
Sbjct: 27 YLYELHLSDSIAGPSVYALLKLA-LVNVLVTQHHEWWRLFTAMFVHLSWIHLAMNTFFLI 85
Query: 84 FIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLS 143
++G +LE G R +LY+ +G G +LS D IS GASGALFG+ GA
Sbjct: 86 YLGSQLELFVGRWRYLILYITAGLFGNVLSVALMDPY----TISGGASGALFGIAGAL-- 139
Query: 144 EIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
I+ L N ++ + +N +MP ++ +AH+GG + GI G+I
Sbjct: 140 -IMIEGILKKNIQSALANAFFLFLIN---SWMPHVNAIAHLGGLLVGIAFGYI 188
>gi|445423375|ref|ZP_21436613.1| peptidase, S54 family [Acinetobacter sp. WC-743]
gi|444755755|gb|ELW80330.1| peptidase, S54 family [Acinetobacter sp. WC-743]
Length = 269
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 3 VNNCPKNLGE-DRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYR 61
+ N P +G+ + ++G F+ Q S ++ P+T + G L + E YR
Sbjct: 9 IYNSPNTIGKITLLLIAINVGLFAIQVLSGVNITDPTTLDALRWGADYAPLTFLE-EPYR 67
Query: 62 FFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC-LHQDES 120
FS M+ H ++HLL N A+ G E+ FG LY+L+G G LLS L S
Sbjct: 68 LFSSMFFHFGILHLLMNMWALYIFGDVAEKTFGKFYFLGLYLLAGLMGSLLSSYLDIRNS 127
Query: 121 QQTLQ---------ISVGASGALFGLLGA----SLSEIITNWTLYTNKCVSITMLILVIG 167
+ LQ +S GASGA+ GL GA SL N +K L+ V+
Sbjct: 128 YEFLQHFDQKLIPHVSAGASGAVMGLGGALTLLSLFPPTPNQRFILDK----RSLLTVLA 183
Query: 168 VNMAIGFMP-GIDNMAHIGGFVAGILLG 194
+N+A GF+ GI+N AHIGG + G ++
Sbjct: 184 INLAFGFLASGINNAAHIGGMLMGAVMA 211
>gi|298706212|emb|CBJ29253.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 269
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
+ G+ YR + + LH + HL NS++ +G +E G + +Y L+G G +L
Sbjct: 91 ITQQGQWYRLLTPIVLHGSFTHLAVNSMSFSSVGPVVERVMGKAKFVTVYTLAGIAGNVL 150
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTL--YTNKCVSITMLILVIGVNM 170
SC+ + SVGASGA+FG++GA + + N T+ N ++ + + +N+
Sbjct: 151 SCIVNPRTP-----SVGASGAIFGMVGAWGAFCLMNETVLGRNNSQRALRNVAQTVMINV 205
Query: 171 AIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHK 220
G IDNM H+GGF+ G + F L+ P++ PY Y ++
Sbjct: 206 VYGMGSSQIDNMGHLGGFLGGAAMTF--LIGPRFKRRLNPYTGQPYIVDES 254
>gi|428216600|ref|YP_007101065.1| Peptidase S54, rhomboid domain-containing protein [Pseudanabaena
sp. PCC 7367]
gi|427988382|gb|AFY68637.1| Peptidase S54, rhomboid domain protein [Pseudanabaena sp. PCC 7367]
Length = 530
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 6/172 (3%)
Query: 35 FGPST--ATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
FG ST TL +LG L V + GE +R + M+LH IHL N + + F+G +E
Sbjct: 351 FGGSTDLGTLYQLGALDPIAVRHQGEWWRLVNAMFLHYGYIHLFMNMIGLYFLGGFVETS 410
Query: 93 FGFLRIGLLYVLSGFGGGL-LSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTL 151
G+ R L+Y+ SG G L ++ + S + QI+VGASGA+ G++GA+ + + W
Sbjct: 411 LGWWRYLLVYLFSGIGSMLTVTIVAFFVSPELPQITVGASGAIMGMVGATGALLWLAWQR 470
Query: 152 YTNKCVS--ITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLR 200
K + + ++ +IG+ + F +P + + H G + G + G+++ R
Sbjct: 471 ERAKVAARRLRTVLFIIGLQVFFDFAVPNVSFVGHTSGLILGAIAGWLVAPR 522
>gi|218557587|ref|YP_002390500.1| hypothetical protein ECS88_0691 [Escherichia coli S88]
gi|432361433|ref|ZP_19604618.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE5]
gi|218364356|emb|CAR02031.1| conserved hypothetical protein; putative membrane protein
[Escherichia coli S88]
gi|430889951|gb|ELC12598.1| 40-residue YVTN family beta-propeller [Escherichia coli KTE5]
Length = 625
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 90/160 (56%), Gaps = 5/160 (3%)
Query: 40 ATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIG 99
+ L LG +L + D E +R S ++LH++ HLL N A+L +G E G R+
Sbjct: 43 SALIHLGANVASLTLSD-ESWRLLSSVFLHSSFSHLLMNMFALLVVGTVAERILGKWRLL 101
Query: 100 LLYVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITN--WTLYTNKC 156
++++ SG GGL+S C ES+Q + IS+GASGA+ G+ GA+++ + + T + N+
Sbjct: 102 IIWLFSGIFGGLISACYTLRESEQIV-ISIGASGAIMGIAGAAIATQLASGAGTHHKNQR 160
Query: 157 VSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+L +V + GIDN HIGG +AG LG++
Sbjct: 161 RVFPLLGMVALTLLYGTRQTGIDNACHIGGLIAGGTLGWL 200
>gi|291537195|emb|CBL10307.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Roseburia intestinalis M50/1]
Length = 348
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 85/153 (55%), Gaps = 4/153 (2%)
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
GG+ + + + +R F+ M++H + HL+ N + +G +LE G ++ ++Y+LS
Sbjct: 191 GGMYPEFIQINHQWWRIFTAMFIHFGLPHLVNNMVIFCCVGSRLERAAGHFKMFVIYMLS 250
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G GGGLLS S +S GASGA+FG +G + +I + + K +++ +IL+
Sbjct: 251 GIGGGLLSYFMMLYSGD-YAVSAGASGAVFGTIGGLIWVVIRHRGRF--KGLTVKGMILM 307
Query: 166 IGVNMAIGFMP-GIDNMAHIGGFVAGILLGFIL 197
+++ GF GIDN H+GG + G L IL
Sbjct: 308 AVLSLYYGFSTIGIDNWCHVGGILTGFLAAMIL 340
>gi|148702640|gb|EDL34587.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_b [Mus musculus]
Length = 888
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
N V D + YR + ++LHA ++H L + + + I LE+ G+ RI ++++LSG G
Sbjct: 679 NPEVPD-QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGN 737
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
L S + + VG +G+ FGLL E+ +W L + L ++
Sbjct: 738 LASAIFL-----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLF 792
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
G +P IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 793 ICGLLPWIDNIAHIFGFLSGMLLAFAFL----------PYITFGTSDKYRK 833
>gi|297193265|ref|ZP_06910663.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
gi|297151714|gb|EFH31321.1| conserved hypothetical protein [Streptomyces pristinaespiralis ATCC
25486]
Length = 299
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 86/156 (55%), Gaps = 12/156 (7%)
Query: 48 LSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGF 107
L+ + V DGE YR + M+LH H+ N L + ++G LEE G +R LY++SG
Sbjct: 124 LAEVVGVADGEWYRLATAMFLHETTWHIFFNMLLLWWLGGPLEEALGRVRYLALYLISGL 183
Query: 108 GGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIG 167
G + L + +Q +L GASGA++GLLGA++ L + ++++I
Sbjct: 184 AGSAFTYLIESPAQGSL----GASGAIYGLLGATV-------VLMRRMRQDLRPIMVLIA 232
Query: 168 VNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
+N+ I F GI AHIGG VAG+++ + L+ PQ
Sbjct: 233 INLVITFYWAGIAWQAHIGGLVAGVVIAYGLVHAPQ 268
>gi|431798600|ref|YP_007225504.1| hypothetical protein Echvi_3269 [Echinicola vietnamensis DSM 17526]
gi|430789365|gb|AGA79494.1| putative membrane protein [Echinicola vietnamensis DSM 17526]
Length = 516
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 92/169 (54%), Gaps = 10/169 (5%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
++ P+ L ++GG +R V +GE +R F+ +++H ++HL N + LE
Sbjct: 341 NIVSPTPKELLEIGG-NRRFEVVNGEYWRLFTSIFIHGGLMHLFMNLFGLGLGASLLEGI 399
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
G ++ + +++ G + S + + +SVGASGA+FGL G L+ T + +Y
Sbjct: 400 LGRTQLIISFIVCGILASIASIYWHENT-----VSVGASGAIFGLYGLILA--FTVFKIY 452
Query: 153 TNKCVSITMLIL--VIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLL 199
+T ++L G+++ GF+ GIDN AH GG ++G +LG IL+L
Sbjct: 453 PTHMRGMTWMLLGLYAGLSLLFGFLGGIDNAAHFGGLISGFILGGILIL 501
>gi|309803097|ref|ZP_07697194.1| peptidase, S54 family [Lactobacillus iners LactinV 11V1-d]
gi|309806110|ref|ZP_07700129.1| peptidase, S54 family [Lactobacillus iners LactinV 03V1-b]
gi|329920170|ref|ZP_08277001.1| peptidase, S54 family [Lactobacillus iners SPIN 1401G]
gi|349611504|ref|ZP_08890739.1| hypothetical protein HMPREF1027_00166 [Lactobacillus sp. 7_1_47FAA]
gi|308164605|gb|EFO66855.1| peptidase, S54 family [Lactobacillus iners LactinV 11V1-d]
gi|308167465|gb|EFO69625.1| peptidase, S54 family [Lactobacillus iners LactinV 03V1-b]
gi|328936624|gb|EGG33068.1| peptidase, S54 family [Lactobacillus iners SPIN 1401G]
gi|348608597|gb|EGY58577.1| hypothetical protein HMPREF1027_00166 [Lactobacillus sp. 7_1_47FAA]
Length = 232
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L G ++ VV + +R F+ ++HA H++ N + I F G+ LE+ G +R +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFLEQFLGHIRYLTI 104
Query: 102 YVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT 160
Y+LSG GG LLS L QD IS GAS A+FGL+G+ L+ N +
Sbjct: 105 YLLSGVGGNLLSFALGQDNV-----ISCGASTAVFGLMGSVLALYFLNNDNIIAVIIGRQ 159
Query: 161 MLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
+L+I + FMP +D + HIGG + G LL IL
Sbjct: 160 AFLLLICNIVVDFFMPSVDIIGHIGGTITGFLLTIIL 196
>gi|89894371|ref|YP_517858.1| hypothetical protein DSY1625 [Desulfitobacterium hafniense Y51]
gi|219668797|ref|YP_002459232.1| rhomboid family protein [Desulfitobacterium hafniense DCB-2]
gi|423073963|ref|ZP_17062698.1| peptidase, S54 family [Desulfitobacterium hafniense DP7]
gi|89333819|dbj|BAE83414.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539057|gb|ACL20796.1| Rhomboid family protein [Desulfitobacterium hafniense DCB-2]
gi|361855174|gb|EHL07168.1| peptidase, S54 family [Desulfitobacterium hafniense DP7]
Length = 327
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 10/170 (5%)
Query: 33 SLFGPSTAT-LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEE 91
+L G ST T + L G N ++ GE +R F+ M+LH +HL N A+ +G EE
Sbjct: 166 TLAGGSTRTGVLILFGAKVNALIIQGEYWRLFTSMFLHIGFLHLAFNLYALWALGAIAEE 225
Query: 92 DFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTL 151
G +R +Y+LSG G + S D IS GASGA+FG+LGA + + +
Sbjct: 226 LLGRVRYITVYILSGILGSVASFFFTD------AISAGASGAIFGILGALV--VYSRRKP 277
Query: 152 YTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLR 200
+ K L +V+ +N+ +G F GID AH+GG V G+L +++ ++
Sbjct: 278 FLWKSGFGKSLAVVVLINLGLGFFQTGIDVYAHLGGLVTGMLFTWLISMK 327
>gi|219849715|ref|YP_002464148.1| rhomboid family protein [Chloroflexus aggregans DSM 9485]
gi|219543974|gb|ACL25712.1| Rhomboid family protein [Chloroflexus aggregans DSM 9485]
Length = 271
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 22/177 (12%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
S F P+ + L LG N + GE++R + LHAN+IH+ N A+ +G + E
Sbjct: 67 SFFQPTLSVLVVLGA-KVNERIAAGEVWRLLTATVLHANLIHIFFNGYALSVLGPETERF 125
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
+G +R +LY+LSG GG + S +VGASGA+FGL+G Y
Sbjct: 126 YGHVRFLVLYLLSGVGGSIASYALSSAP------AVGASGAIFGLIGG------LGMFYY 173
Query: 153 TNKCV-------SITMLILVIGVNMAIGFMPG--IDNMAHIGGFVAGILLGFILLLR 200
N+ V + ++ + +N+ IGF IDN H+GG V+G+++ L R
Sbjct: 174 LNRQVLGQFGQDQVRGIVAIAVINLLIGFAAQGVIDNWGHLGGLVSGVVVSLALSPR 230
>gi|187776993|ref|ZP_02993466.1| hypothetical protein CLOSPO_00538 [Clostridium sporogenes ATCC
15579]
gi|187773921|gb|EDU37723.1| peptidase, S54 family [Clostridium sporogenes ATCC 15579]
Length = 344
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 90/175 (51%), Gaps = 18/175 (10%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
S+F L LG N + +GE YR + M+LH +IHL N A+ IG +E
Sbjct: 177 SIFTSDIRVLIFLGA-KVNSFINNGEYYRLITAMFLHGGLIHLALNMYALNSIGPLVEIY 235
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
FG ++ ++Y +SG + +S+GASGA+FG LGA+ II Y
Sbjct: 236 FGKVKYLIIYFISGI------LSSYFSYLFSSSVSIGASGAIFGTLGATF--IIA----Y 283
Query: 153 TNKCVS----ITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQ 202
N+ + +I VI +N+ +GF +P +DN HIGG + G+++ +L+ R Q
Sbjct: 284 KNRKRGGKEFLNNIISVIVINLILGFSIPNVDNFGHIGGLIGGVIVTLLLMNRAQ 338
>gi|427390838|ref|ZP_18885244.1| hypothetical protein HMPREF9233_00747 [Actinobaculum massiliae
ACS-171-V-Col2]
gi|425732574|gb|EKU95382.1| hypothetical protein HMPREF9233_00747 [Actinobaculum massiliae
ACS-171-V-Col2]
Length = 221
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/162 (35%), Positives = 82/162 (50%), Gaps = 15/162 (9%)
Query: 47 GLSRNLV----VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLY 102
GLS+ L+ + + + YRF S + H+ HL+ N A+ +G+ LE G R +LY
Sbjct: 36 GLSQALLFAPGIAEDQPYRFISSAFAHSGFWHLIFNMYALWLMGMFLERAIGRWRFVMLY 95
Query: 103 VLSGFGGGLLSCLHQDESQQTLQIS-VGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
L+ GG + L E VGASGA+FGL GA + L N
Sbjct: 96 ALAAIGGNVFVLLTASEDTMGWWTGVVGASGAVFGLFGALF---VVQRHLGRNDV----Q 148
Query: 162 LILVIGVNMAIGFMPG--IDNMAHIGGFVAGILLGFILLLRP 201
L+++IG+N+ IGFMPG I +H+GG + G +L LRP
Sbjct: 149 LLVIIGINLVIGFMPGMNISWQSHVGGLIVGAIL-MAATLRP 189
>gi|390456491|ref|ZP_10242019.1| rhomboid protease gluP Intramembrane serine protease [Paenibacillus
peoriae KCTC 3763]
Length = 207
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Query: 27 QPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIG 86
Q S+NSL TL + G L N + +++R+ S M+LHA HLL NS AIL
Sbjct: 36 QGGSQNSL------TLIRYGALI-NEAPFTDQLWRYVSAMFLHAGFDHLLFNSFAILVFA 88
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
LE G LR LLY+++G G ++S H + +T +SVGASGA++G+ GA L +
Sbjct: 89 PPLERLLGSLRYVLLYLVTGIVGNVMSIAHYNMVAET-TVSVGASGAIYGIYGAFLYVAL 147
Query: 147 TNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
+ + +L G+ + + I+ AH GG ++G L
Sbjct: 148 FQRSFMDDASRKTLYTLLGFGILFSFA-VANINWTAHFGGLLSGFFL 193
>gi|403380902|ref|ZP_10922959.1| rhomboid family protein [Paenibacillus sp. JC66]
Length = 201
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 7/154 (4%)
Query: 40 ATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIG 99
AT+ G + R L + E +R+F+ M+LH +HLL N A+ LE G R
Sbjct: 43 ATMINFGAMFR-LSGFSPEWWRYFASMFLHFGFMHLLMNCFALYVFAPPLERMIGSFRYL 101
Query: 100 LLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSI 159
L Y+LSGF G L+S L E +S GASGA++G+ A L I + +
Sbjct: 102 LFYLLSGFSGSLISYLLMSER----TVSAGASGAVYGVFAAYLFLAIFRKDVLDAQSGQT 157
Query: 160 TMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
IL++G+ ++ +PG+ H+GGF+ G L
Sbjct: 158 IKTILIVGLIYSL--LPGVSFFGHLGGFIGGFAL 189
>gi|336406188|ref|ZP_08586849.1| hypothetical protein HMPREF0127_04162 [Bacteroides sp. 1_1_30]
gi|335935437|gb|EGM97389.1| hypothetical protein HMPREF0127_04162 [Bacteroides sp. 1_1_30]
Length = 584
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST +L K G L + G+ +R +C ++H HLL N A +++G+ LE+
Sbjct: 177 IMSPSTLSLLKWGADFGPLTL-TGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEDLI 235
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G + S E+ IS GASGA+FGL G L+ + +
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGET-----ISAGASGAIFGLYGIFLAFLFFHRIAKE 290
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHI 184
+ +T +++ +G N+ G GIDN AHI
Sbjct: 291 QRKALLTSILIFVGYNLVYGMKAGIDNAAHI 321
>gi|298480750|ref|ZP_06998946.1| S54 family peptidase [Bacteroides sp. D22]
gi|298273184|gb|EFI14749.1| S54 family peptidase [Bacteroides sp. D22]
Length = 584
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST +L K G L + G+ +R +C ++H HLL N A +++G+ LE+
Sbjct: 177 IMSPSTLSLLKWGADFGPLTL-TGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEDLI 235
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G + S E+ IS GASGA+FGL G L+ + +
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGET-----ISAGASGAIFGLYGIFLAFLFFHRIAKE 290
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHI 184
+ +T +++ +G N+ G GIDN AHI
Sbjct: 291 QRKALLTSILIFVGYNLVYGMKAGIDNAAHI 321
>gi|429205379|ref|ZP_19196656.1| Integral membrane protein, Rhomboid family [Lactobacillus
saerimneri 30a]
gi|428146451|gb|EKW98690.1| Integral membrane protein, Rhomboid family [Lactobacillus
saerimneri 30a]
Length = 224
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 76/138 (55%), Gaps = 7/138 (5%)
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
GE +R + M+LH + HL N + + FIG ++E+ +G R+ ++Y+LSG G LLS
Sbjct: 63 QGEWWRLIAAMFLHDGIGHLFINMITLYFIGPEIEDHYGHARMLVIYLLSGLYGNLLSAF 122
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM 175
+ ++VGASGALFGL GA L I+ + + +L + +N+ +GF
Sbjct: 123 WAPTT-----LAVGASGALFGLFGAYL--ILGHQSTDAQIQAQARQFLLFVILNVVLGFS 175
Query: 176 PGIDNMAHIGGFVAGILL 193
D H+GG +AG L+
Sbjct: 176 GNTDLAGHVGGLIAGCLV 193
>gi|395532997|ref|XP_003768550.1| PREDICTED: inactive rhomboid protein 2 [Sarcophilus harrisii]
Length = 827
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 5/141 (3%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA + H L + L + I LE+ G+LRI ++++LSG G L S +
Sbjct: 623 QFYRLWLSLFLHAGLGHCLVSVLFQMTILRDLEKLAGWLRIAIIFILSGITGNLASAIFL 682
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+I +W L + L ++ G +P
Sbjct: 683 -----PYRAEVGPAGSQFGILACLFVELIQSWQLLEKPWKAFLNLSGIVFFLFICGLLPW 737
Query: 178 IDNMAHIGGFVAGILLGFILL 198
IDN+AHI GF++G+LL F L
Sbjct: 738 IDNIAHIFGFLSGLLLSFAFL 758
>gi|295085069|emb|CBK66592.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Bacteroides xylanisolvens XB1A]
Length = 584
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST +L K G L + G+ +R +C ++H HLL N A +++G+ LE+
Sbjct: 177 IMSPSTLSLLKWGADFGPLTL-TGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEDLI 235
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G + S E+ IS GASGA+FGL G L+ + +
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGET-----ISAGASGAIFGLYGIFLAFLFFHRIAKE 290
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHI 184
+ +T +++ +G N+ G GIDN AHI
Sbjct: 291 QRKALLTSILIFVGYNLVYGMKAGIDNAAHI 321
>gi|391344354|ref|XP_003746466.1| PREDICTED: inactive rhomboid protein 1-like [Metaseiulus
occidentalis]
Length = 692
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 87/188 (46%), Gaps = 11/188 (5%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
+IYR + ++LHA ++H ++ +++ LE +G RIG +Y++SG GG L S +
Sbjct: 473 DQIYRLLTSLFLHAGLLHFALTAIVQMWLMRDLERIYGPHRIGAIYMMSGIGGNLASAIF 532
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP 176
+ VG S ALFG++ ++E++ W ++ + +L I + + G P
Sbjct: 533 -----VPYRADVGPSAALFGIMAIFIAELVKLWDRLLDRKRATLHAVLPILIGIVCGLTP 587
Query: 177 GIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGY--ELNHKKPKYQCHQKLLWVI 234
DN H+ G+++GF+L + P + E K + C VI
Sbjct: 588 WTDNFGHL----FGLIIGFVLAMVPHNSEKQNADLDESQMIEYRRKARRRWCLCAASLVI 643
Query: 235 SVVVLFVW 242
V L VW
Sbjct: 644 VFVGLLVW 651
>gi|403050890|ref|ZP_10905374.1| hypothetical protein AberL1_04958 [Acinetobacter bereziniae LMG
1003]
Length = 269
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 100/208 (48%), Gaps = 21/208 (10%)
Query: 3 VNNCPKNLGE-DRCVFHDHLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYR 61
+ N P +G+ + ++G F+ Q S ++ P+T + G L + E YR
Sbjct: 9 IYNSPNTIGKITLLLIAINVGLFAIQVLSGVNITDPTTLDALRWGADYAPLTFLE-EPYR 67
Query: 62 FFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS-CLHQDES 120
FS M+ H ++HLL N A+ G E+ FG LY+L+G G LLS L S
Sbjct: 68 LFSSMFFHFGILHLLMNMWALYIFGDVAEKTFGKFYFLGLYLLAGLMGSLLSGYLDIRNS 127
Query: 121 QQTLQ---------ISVGASGALFGLLGA----SLSEIITNWTLYTNKCVSITMLILVIG 167
+ LQ +S GASGA+ GL GA SL N +K L+ V+
Sbjct: 128 YEFLQHFDQKLIPHVSAGASGAVMGLGGALTLLSLFPPTPNQRFVLDK----RSLLTVLA 183
Query: 168 VNMAIGFMP-GIDNMAHIGGFVAGILLG 194
+N+A GF+ GI+N AHIGG + G ++
Sbjct: 184 INLAFGFLASGINNAAHIGGMLMGAVMA 211
>gi|209877288|ref|XP_002140086.1| rhomboid family protein [Cryptosporidium muris RN66]
gi|209555692|gb|EEA05737.1| rhomboid family protein [Cryptosporidium muris RN66]
Length = 892
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 77/166 (46%), Gaps = 6/166 (3%)
Query: 27 QPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIG 86
+P N + G L LGGL N + +G + R F MW+HA IH+ N L+ +G
Sbjct: 512 EPFKTNPMLGACPEALNVLGGLVVN-ELRNGGVIRLFWAMWMHAGFIHIGFNVLSQAQLG 570
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
+E D+G R L+ LS GG L + S ++VG+SG LFG+ A L
Sbjct: 571 YMMEPDWGMTRFFFLFFLSAIGGNLTVSVISPCS-----LTVGSSGGLFGITAAGLVYTF 625
Query: 147 TNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGIL 192
+W N I + + M + F + AH+GGF G+L
Sbjct: 626 EHWKNLPNPLFLFVFDIFSVIIGMVLSFTGVTNPWAHVGGFSVGLL 671
>gi|344248590|gb|EGW04694.1| Rhomboid family member 2 [Cricetulus griseus]
Length = 238
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 35 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 94
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 95 PYRAE-----VGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPW 149
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 150 IDNIAHIFGFLSGMLLAFAFL----------PYITFGTSDKYRK 183
>gi|443287776|ref|ZP_21026871.1| Rhomboid family protein [Micromonospora lupini str. Lupac 08]
gi|385882192|emb|CCH21804.1| Rhomboid family protein [Micromonospora lupini str. Lupac 08]
Length = 303
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 10/149 (6%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
+ +G+ YR + M+LH VIHLL N A+ +G LE + G LR G LY+++G GG + +
Sbjct: 134 IAEGQWYRLVTAMFLHYGVIHLLLNMWALWVLGRSLEANLGPLRFGALYLIAGLGGNVAA 193
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L ++ T GAS A+FGL A II L + +S + ILVI + +
Sbjct: 194 YLFSAQNSAT----AGASTAVFGLFAA---LIIIERKL--GRDISQVIPILVINLVFTL- 243
Query: 174 FMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+PGI H+GG V G + +L P+
Sbjct: 244 TVPGISIPGHLGGLVVGAAMSLVLAYAPR 272
>gi|321259830|ref|XP_003194635.1| hypothetical protein CGB_F1590W [Cryptococcus gattii WM276]
gi|317461107|gb|ADV22848.1| hypothetical protein CNBF1190 [Cryptococcus gattii WM276]
Length = 530
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 76/139 (54%), Gaps = 5/139 (3%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF ++LH +IHL+ N L + ++E + G + ++Y+L G G +L
Sbjct: 314 WRFILPIFLHVGIIHLIINMLVQITASAQVEREMGTIPFLIVYMLGGIYGFVLG----GN 369
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP-GI 178
+T SVGASGALF L +++ +W + +L+L +G+ A+G++P +
Sbjct: 370 FTRTGIPSVGASGALFATNACVLVDLVLHWKYEERPKLKACLLVLELGIGFAMGYIPNAV 429
Query: 179 DNMAHIGGFVAGILLGFIL 197
D +AH+GG+ GIL G IL
Sbjct: 430 DGLAHLGGWAMGILCGIIL 448
>gi|262200065|ref|YP_003271273.1| rhomboid family protein [Gordonia bronchialis DSM 43247]
gi|262083412|gb|ACY19380.1| Rhomboid family protein [Gordonia bronchialis DSM 43247]
Length = 303
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 86/163 (52%), Gaps = 13/163 (7%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
+E + P A L G L + +V +GE +R + +LH +V+H+ N +++ IG L
Sbjct: 96 AEAGITNPGNAALMSDGSLVKG-IVGEGEYWRLLTAGFLHFSVMHVAVNMISLYIIGRDL 154
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E G R +Y++S GG L + ++ QT GASGA++GL+GA L ++
Sbjct: 155 ERALGTYRYLAVYLISLLGGSAAVMLFEADNVQT----AGASGAIYGLIGAMLVIVL--- 207
Query: 150 TLYTNKCVSITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGI 191
V T ++++IG N+ + +PGI MAH+GG G+
Sbjct: 208 ----KARVPATPVLVIIGFNVVLSVSLPGISLMAHLGGLAFGV 246
>gi|163815032|ref|ZP_02206419.1| hypothetical protein COPEUT_01188 [Coprococcus eutactus ATCC 27759]
gi|158449715|gb|EDP26710.1| peptidase, S54 family [Coprococcus eutactus ATCC 27759]
Length = 377
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 86/160 (53%), Gaps = 5/160 (3%)
Query: 44 KLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYV 103
+ GGL+ V + E R S M+LH+ HL+ N A+ G +E+ G LR+ ++Y
Sbjct: 78 RTGGLNYEYVKLNKEYGRLLSSMFLHSGFDHLVGNMFALFMFGSTVEKKLGSLRMTIIYF 137
Query: 104 LSGFGGGLLSC-LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITML 162
+SG GL+S L + S+GASGA+FG++ A++ + + + ++I ++
Sbjct: 138 VSGIVSGLISMNLSHVMDPSRMHFSIGASGAVFGVMCAAVFLSVMGSKKASRRDMTIAIV 197
Query: 163 ILVIGVNMAI-GFMPGIDNMAHIGGFVAGILLGFILLLRP 201
++VI AI + ID AHIGG V G +L F L +R
Sbjct: 198 LVVI---YAIYTYEENIDIYAHIGGAVVGGILAFALNVRK 234
>gi|419012186|ref|ZP_13559551.1| rhomboid family protein [Escherichia coli DEC1D]
gi|377862951|gb|EHU27758.1| rhomboid family protein [Escherichia coli DEC1D]
Length = 625
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 82/143 (57%), Gaps = 4/143 (2%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS-CL 115
GE +R S ++LH++ HLL N A+L +G E G R+ ++++ SG GGL+S C
Sbjct: 59 GEPWRLLSSVFLHSSFSHLLMNMFALLAVGTVAERILGKWRLLIIWLFSGIFGGLISACY 118
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITN--WTLYTNKCVSITMLILVIGVNMAIG 173
ES+Q + ISVGASGA+ G+ GA+++ + + T + N+ +L +V +
Sbjct: 119 ALRESEQIV-ISVGASGAIMGIAGAAIATQLASGAGTHHKNQRRVFPLLGMVALTLLYGT 177
Query: 174 FMPGIDNMAHIGGFVAGILLGFI 196
GIDN HIG +AG LG++
Sbjct: 178 RQTGIDNACHIGDLIAGGALGWL 200
>gi|410657229|ref|YP_006909600.1| GlpG protein (membrane protein of glp regulon) [Dehalobacter sp.
DCA]
gi|410660265|ref|YP_006912636.1| Rhomboid-like protein [Dehalobacter sp. CF]
gi|409019584|gb|AFV01615.1| GlpG protein (membrane protein of glp regulon) [Dehalobacter sp.
DCA]
gi|409022621|gb|AFV04651.1| Rhomboid-like protein [Dehalobacter sp. CF]
Length = 203
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 76/145 (52%), Gaps = 9/145 (6%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ G+ +R + M++H HLL N A++ +G E FG R L+Y+ SG
Sbjct: 49 GAKMNTLIDAGQYWRLLTSMFIHIGFTHLLFNVYALIVLGKLAERLFGHGRFLLIYLFSG 108
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
G L+S L E +S GASGA+FGLLGA + + IT L +V+
Sbjct: 109 LAGSLISYLWGPE------LSAGASGAIFGLLGAIIIYGCRKPAFWRTGL--ITNLAIVL 160
Query: 167 GVNMAIGFM-PGIDNMAHIGGFVAG 190
G+N+ G + GIDN AH+GG G
Sbjct: 161 GINLVFGVVFSGIDNFAHLGGLFGG 185
>gi|299823020|ref|ZP_07054906.1| possible Rhomboid protease [Listeria grayi DSM 20601]
gi|299816549|gb|EFI83787.1| possible Rhomboid protease [Listeria grayi DSM 20601]
Length = 512
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
N ++Y GE +R + M+LH +H+ N++ + +G E+ +G R L+ ++ GF G
Sbjct: 219 NPLIYAGEWWRLITPMFLHNGWMHIAANAVMLYIVGPWAEKIYGKWRFALILLIGGFAGN 278
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
L S + + +SVGAS ++F + GA L ++ LY K + + LV+ VN+
Sbjct: 279 LASFVLNN------HLSVGASTSVFAVFGALLYLVVLKPNLYA-KTIGTNVATLVV-VNI 330
Query: 171 AIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
IG F ID M HIGG V G L+ + L QY
Sbjct: 331 LIGLFSAEIDMMGHIGGLVGGFLIAGSISLPNQY 364
>gi|223478122|ref|YP_002582479.1| hypothetical protein [Thermococcus sp. AM4]
gi|214033348|gb|EEB74175.1| hypothetical protein TAM4_1542 [Thermococcus sp. AM4]
Length = 207
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 87/164 (53%), Gaps = 11/164 (6%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
S+ GPS L KL L LV E +R F+ M++H + IHL N+ ++++G +LE
Sbjct: 36 SIAGPSLYALLKLA-LVNVLVTQYHEWWRLFTAMFVHLSWIHLAMNTFFLIYLGSQLELF 94
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
G R +LY+ +G G +LS D IS GASGALFG+ GA I+ L
Sbjct: 95 VGRWRYLVLYITAGLFGNVLSVALMDPY----TISGGASGALFGIAGAL---IMIEGILK 147
Query: 153 TNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
N ++ + +N +MP ++ +AH+GG + GI LG+I
Sbjct: 148 KNIQSALANAFFLFLIN---SWMPHVNAIAHLGGLIVGIALGYI 188
>gi|255690223|ref|ZP_05413898.1| peptidase, S54 family [Bacteroides finegoldii DSM 17565]
gi|260624242|gb|EEX47113.1| peptidase, S54 family [Bacteroides finegoldii DSM 17565]
Length = 584
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 79/152 (51%), Gaps = 6/152 (3%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
+ PST +L K G L + G+ +R +C ++H HLL N A +++G+ LE+
Sbjct: 176 EIMSPSTLSLLKWGADFGPLTL-TGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEDL 234
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
G R+ + Y+L+G + S E+ IS GASGA+FGL G L+ + +
Sbjct: 235 IGSRRMFMSYLLTGLCSAVFSLYMHGET-----ISAGASGAIFGLYGIFLAFLFFHRIAK 289
Query: 153 TNKCVSITMLILVIGVNMAIGFMPGIDNMAHI 184
+ +T +++ +G N+ G GIDN AHI
Sbjct: 290 EQRKALLTSILIFVGYNLVYGMKAGIDNAAHI 321
>gi|424826465|ref|ZP_18251350.1| S54 family peptidase [Clostridium sporogenes PA 3679]
gi|365980910|gb|EHN16927.1| S54 family peptidase [Clostridium sporogenes PA 3679]
Length = 343
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 91/175 (52%), Gaps = 18/175 (10%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
S+F L LG N + +GE YR + M+LH +IHL N A+ IG +E
Sbjct: 177 SIFTSDIRVLIFLGA-KVNSFINNGEYYRLITAMFLHGGLIHLALNMYALNSIGPLVEIY 235
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY 152
FG ++ ++Y +SG + +S+GASGA+FG LGA+L II Y
Sbjct: 236 FGKVKYLIIYFISGI------LSSYFSYLFSSSVSIGASGAIFGTLGATL--IIA----Y 283
Query: 153 TNKCVS----ITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQ 202
N+ + +I VI +N+ +GF +P +DN HIGG + G+++ +L+ R +
Sbjct: 284 KNRKKGGKEFLNNIISVIVINLILGFSIPNVDNFGHIGGLIGGVIVTLLLMNRTK 338
>gi|395242536|ref|ZP_10419533.1| Putative membrane protein [Lactobacillus pasteurii CRBIP 24.76]
gi|394480268|emb|CCI85773.1| Putative membrane protein [Lactobacillus pasteurii CRBIP 24.76]
Length = 240
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/182 (31%), Positives = 91/182 (50%), Gaps = 21/182 (11%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
+F SEN ATL KLG ++ V + +R F+ +LH ++HL++N++ I +
Sbjct: 30 TFMGGSENP------ATLMKLGAMNNYAVAAGHQWWRLFTAQFLHIGIMHLVSNAVMIFY 83
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E G R ++Y+LSG GG L+S ++ +S GAS ALFGLLGA ++
Sbjct: 84 LGNYFESIIGHWRFWVIYLLSGVGGNLMSFAFGSDN----SLSAGASTALFGLLGAVIA- 138
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG---------FMPGIDNMAHIGGFVAGILLGF 195
I+ + S++ ++ G A FMP +D HIGG + G +
Sbjct: 139 -ISRRRASASPNSSLSAMLNYFGRQAAALAIINLAIDIFMPNVDIQGHIGGLLMGFMATA 197
Query: 196 IL 197
+L
Sbjct: 198 VL 199
>gi|300742642|ref|ZP_07072663.1| rhomboid family protein [Rothia dentocariosa M567]
gi|300381827|gb|EFJ78389.1| rhomboid family protein [Rothia dentocariosa M567]
Length = 261
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 80/147 (54%), Gaps = 12/147 (8%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHA--NVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
L + + GE YR + +LH+ + H++ N L++ G+ LE+ G+ R L+Y+L
Sbjct: 103 ALKWDYTEFTGEYYRVLTSGFLHSQNDYSHIVMNMLSLYIFGIALEQMMGWWRYLLVYLL 162
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
S GG L D + + VGASG +FGL+GA L ++ + +I L++
Sbjct: 163 SIVGGSFGVLLLDDPTAEV----VGASGGIFGLIGAYLVIMVI-----LRERDNIRALMI 213
Query: 165 VIGVNMAIGFM-PGIDNMAHIGGFVAG 190
+I VN+A GF+ PGI AH GGFV G
Sbjct: 214 MIAVNVAFGFLVPGISWQAHAGGFVVG 240
>gi|197123290|ref|YP_002135241.1| rhomboid family protein [Anaeromyxobacter sp. K]
gi|196173139|gb|ACG74112.1| Rhomboid family protein [Anaeromyxobacter sp. K]
Length = 360
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/162 (35%), Positives = 80/162 (49%), Gaps = 19/162 (11%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL----EEDFGFLR 97
L ++G L + V+DGE +R + +LH +HLL N L GV L E G R
Sbjct: 48 LARMGALD-HARVWDGEPWRLLTAAFLHVGPVHLLWN----LAFGVPLCAVVERAIGTRR 102
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLS---EIITNWTLYTN 154
+Y+ S GG S L + +S GASGALFG+ GA L+ + +W +
Sbjct: 103 FLAVYLASALGGSAASLL------AAMPMSAGASGALFGVAGAMLALYRRAVGSWRAFLA 156
Query: 155 KCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
I IL++G +A F+P ID AH GG V G LG+I
Sbjct: 157 SRDIILNGILLVGFALAGLFLP-IDGWAHAGGLVTGAWLGWI 197
>gi|354580522|ref|ZP_08999427.1| Rhomboid family protein [Paenibacillus lactis 154]
gi|353202953|gb|EHB68402.1| Rhomboid family protein [Paenibacillus lactis 154]
Length = 204
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 83/155 (53%), Gaps = 8/155 (5%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
TL K G L+ +L + GE +R+ + M+LH HLL NS A+L LE G + GL
Sbjct: 44 TLLKYGALT-DLPQFTGEPWRYVTAMFLHNGFDHLLFNSFALLVFVPPLERIMGSWKFGL 102
Query: 101 LYVLSGFGGGLLSCLH--QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVS 158
LY+LSG G +++ + + E +TL VGASGA++G GA L I + + S
Sbjct: 103 LYLLSGILGNVIALAYYGRMEGYETL---VGASGAIYGAYGAYLY--IALFQRHVMDMAS 157
Query: 159 ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
L ++ + + + F PGI +AH GG + G L
Sbjct: 158 RRTLFTLLILGIVLSFTPGISLVAHFGGLIGGFFL 192
>gi|225026638|ref|ZP_03715830.1| hypothetical protein EUBHAL_00889 [Eubacterium hallii DSM 3353]
gi|224956008|gb|EEG37217.1| peptidase, S54 family [Eubacterium hallii DSM 3353]
Length = 343
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 80/148 (54%), Gaps = 5/148 (3%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
VV + YR F+ M+LH HLL N L +L IG +LE G L L+Y+ +G G
Sbjct: 192 VVEKHQYYRLFTSMFLHFGADHLLQNMLILLVIGCRLERITGKLSYLLIYIGAGLIGAGT 251
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITN---WTLYTNKCVSITMLILVIGVN 169
S + + +S GASGA+FG++G L II++ + + + +T +I ++
Sbjct: 252 SIIFTLGNNPN-TVSAGASGAIFGVMGGLLYCIISDIIQKKRHRVEEIGLTGMIFMVASA 310
Query: 170 MAIGFMP-GIDNMAHIGGFVAGILLGFI 196
++ GF GIDN AHIGG V G L+ I
Sbjct: 311 LSYGFFSTGIDNAAHIGGLVGGFLITMI 338
>gi|452991452|emb|CCQ97320.1| putative Rhomboid protease [Clostridium ultunense Esp]
Length = 400
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 9/147 (6%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N + GE +R + ++LH+ H+ NS+A+ ++G+ +E +G R L+Y ++G
Sbjct: 225 GAKYNPAIKAGEWWRLITSIFLHSGFFHVALNSIALYYLGLLVERMYGRARFLLIYFMAG 284
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
G + S L+ D +SVG+SGA++GL GA L + L+ L+ +I
Sbjct: 285 LLGSVASFLYSD------TVSVGSSGAIYGLFGALLFFGMRRRDLFFRSFGK--DLLFII 336
Query: 167 GVNMAIGFM-PGIDNMAHIGGFVAGIL 192
G+N+ I + P ID AH+GG V G L
Sbjct: 337 GLNLLISVLVPSIDLYAHLGGLVGGFL 363
>gi|374995763|ref|YP_004971262.1| hypothetical protein Desor_3244 [Desulfosporosinus orientis DSM
765]
gi|357214129|gb|AET68747.1| putative membrane protein [Desulfosporosinus orientis DSM 765]
Length = 316
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 9/138 (6%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE++RFF+ M++H +HL N A+ +G E+ FG R ++Y+LSG
Sbjct: 166 GAKVNSLILAGEVWRFFTSMFIHIGYLHLGFNLYALWVLGPFTEKLFGHWRFLVIYLLSG 225
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
GG + S T +S GASGA+FGLLGA L + L+ + +L+LVI
Sbjct: 226 LGGSIASFFF------TSGLSAGASGAIFGLLGALLYYSLKRPWLWKSGLGMNLVLVLVI 279
Query: 167 GVNMAIGF-MPGIDNMAH 183
N G PGIDN AH
Sbjct: 280 --NFGFGLTQPGIDNFAH 295
>gi|440913469|gb|ELR62919.1| Rhomboid family member 1 [Bos grunniens mutus]
Length = 861
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 50/172 (29%), Positives = 82/172 (47%), Gaps = 23/172 (13%)
Query: 58 EIYRFFSCMWLHAN-------VIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
+ YR + ++LHA V+H L + + + LE+ G+ RI ++Y+LSG G
Sbjct: 651 QFYRLWLSLFLHAGQVTPRGLVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGN 710
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
L S + + VG +G+ FG+L E+ +W + + L+ V+
Sbjct: 711 LASAIFL-----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLF 765
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
G +P IDN AHI GF++G+ L F L PYI+ G ++L K+
Sbjct: 766 TFGLLPWIDNFAHISGFISGLFLSFAFL----------PYISFGKFDLYRKR 807
>gi|339235851|ref|XP_003379480.1| peptidase, S54 family [Trichinella spiralis]
gi|316977860|gb|EFV60908.1| peptidase, S54 family [Trichinella spiralis]
Length = 966
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 61 RFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDES 120
R ++LHA +IH + F+ LE+ G+ R+ ++Y++SG GG L S +
Sbjct: 546 RLIIPLFLHAGIIHCFITVVIQYFLLRDLEKLVGWSRVAVIYMISGVGGYLGSAVFV--- 602
Query: 121 QQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDN 180
Q VG +G+ FGLL + +++ +W + ++ L+ I +G +P IDN
Sbjct: 603 --PYQAEVGPAGSQFGLLAGLVVDVVYSWEMIARPWKALGQLLAFIVFLFILGLLPWIDN 660
Query: 181 MAHIGGFVAGILLGFILLLRPQY 203
AH GFV G+LL L Q+
Sbjct: 661 YAHAFGFVFGLLLSLALFPYIQF 683
>gi|410896139|ref|XP_003961557.1| PREDICTED: inactive rhomboid protein 1-like [Takifugu rubripes]
Length = 847
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 19/170 (11%)
Query: 56 DGEIYRFFSCMWL----HANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGL 111
+ E+ FS +WL HA ++H L + + + +E+ G+LR+ ++Y+LSG G L
Sbjct: 638 NPEVPDQFSRLWLSLFLHAGILHCLVSVFFQMTVLRDIEKLAGWLRVSIIYMLSGITGNL 697
Query: 112 LSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMA 171
S + + VG +G+ FG+L E+ +W + ++ L+ + +
Sbjct: 698 ASSIFL-----PYRAEVGPAGSQFGILACLFVELFQSWQILERPWRALGKLLAISTFLFS 752
Query: 172 IGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
G +P IDN AHI GFV+G L F L PYI+ G ++K
Sbjct: 753 FGLLPWIDNFAHICGFVSGFFLSFTFL----------PYISFGRSDMYRK 792
>gi|253573307|ref|ZP_04850650.1| rhomboid family protein [Paenibacillus sp. oral taxon 786 str. D14]
gi|251846835|gb|EES74840.1| rhomboid family protein [Paenibacillus sp. oral taxon 786 str. D14]
Length = 204
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 5/154 (3%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
TL + G +S ++ + G+ +R F+ M+LH HL +NS AIL LE G+ R L
Sbjct: 44 TLLRFGAMS-DIEPFAGQSWRLFTAMFLHNGFDHLFSNSFAILVFAPPLERLLGWWRYAL 102
Query: 101 LYVLSGFGGGLLSC-LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSI 159
+Y+ SG G L+S ++Q S ISVGASGA++G+ GA L + L
Sbjct: 103 VYLGSGLVGNLISMGVYQFSSVP--HISVGASGAVYGVYGAFLYIALLQRHLMDESSRKT 160
Query: 160 TMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
+L+IGV ++ +P I+ AH GG V G +
Sbjct: 161 LYSLLIIGVIYSV-LVPKINLAAHFGGLVGGFFI 193
>gi|335357178|ref|ZP_08549048.1| rhomboid family integral membrane protein [Lactobacillus animalis
KCTC 3501]
Length = 224
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 80/149 (53%), Gaps = 12/149 (8%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE++R F+ M++H + HL N L + F+GV+LE+ FG R LY++SG
Sbjct: 41 GAKYNPLIIQGELWRLFTPMFIHIGLEHLALNLLTLYFLGVQLEQLFGKWRFLALYLISG 100
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASL---SEIITNWTLYTNKCVSITMLI 163
GG +LS + IS GAS +LFGL GA L N + + +++
Sbjct: 101 VGGNILSFALSNN------ISAGASTSLFGLFGAYLMLGESFRQNQYIRMISRQFLVLIV 154
Query: 164 LVIGVNMAIGFMPGIDNMAHIGGFVAGIL 192
L +G ++ F GID H+GG +AG L
Sbjct: 155 LNLGFDL---FAGGIDIWGHLGGLLAGFL 180
>gi|260222883|emb|CBA32895.1| hypothetical protein Csp_B16320 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 364
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 93/204 (45%), Gaps = 37/204 (18%)
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
DG+ +R S M++H V HL N A+ IG LE G R LY+ +G G LLS +
Sbjct: 69 DGQWWRLLSAMFIHFGVWHLAVNMWALWDIGRLLETLLGRWRFAALYLGAGVCGNLLSLV 128
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIIT--------NWTLYTNKCVSITMLILVIG 167
Q +S GASGA+FGL GA L + + + ++L+L +G
Sbjct: 129 VQGNR----AVSGGASGAVFGLYGALLVFLWVERKQVEAGEFRWLFGGALGFSVLMLALG 184
Query: 168 VNMAIGFMPGIDNMAHIGGFVAGILL-GFILLLRPQYGYVSG--PYIA------------ 212
FMPGIDN AH GG VAG+L GF+L + V+G P+++
Sbjct: 185 W-----FMPGIDNAAHGGGLVAGMLWAGFLLQPWTAFSPVAGVRPWLSAVVLISSIALLG 239
Query: 213 -----PGYELNHKKPKYQCHQKLL 231
P Y L + Q Q+ +
Sbjct: 240 LVLPEPAYRLGEEVKVRQSIQRFM 263
>gi|169829737|ref|YP_001699895.1| hypothetical protein Bsph_4306 [Lysinibacillus sphaericus C3-41]
gi|168994225|gb|ACA41765.1| conserved hypothetical protein [Lysinibacillus sphaericus C3-41]
Length = 167
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 88/155 (56%), Gaps = 12/155 (7%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G+ N ++ GE +R FS M+LHA +H+ N+ ++ G +LE+ G R +Y++SG
Sbjct: 5 GIQANFLIQKGEWWRVFSAMFLHAGFMHMFFNTFSLYLFGPELEKIAGKARFITIYLVSG 64
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSI--TMLIL 164
G + + + D S +L GASGA+FG+ GA + + YT K + + +++
Sbjct: 65 IVGNMATYIFYDSSYASL----GASGAIFGIFGAFGALV-----YYTRKTMPMLRKLILP 115
Query: 165 VIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILL 198
+I +++ + F+ P ++ AH+GG V G +LG I L
Sbjct: 116 IIIISVIMTFLQPNVNVFAHLGGLVTGFILGLIYL 150
>gi|238922477|ref|YP_002935990.1| hypothetical protein EUBREC_0051 [Eubacterium rectale ATCC 33656]
gi|238874149|gb|ACR73856.1| hypothetical protein EUBREC_0051 [Eubacterium rectale ATCC 33656]
Length = 192
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 90/153 (58%), Gaps = 12/153 (7%)
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS-- 113
DG+ +R F+ M++H ++H+L N + + +G +E+ G +++ + +++SG G +LS
Sbjct: 41 DGQYWRLFTSMFMHFGLMHILNNMVVLGAVGQIVEKAMGHVKLLITFLVSGMCGSVLSYI 100
Query: 114 -CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY--TNKCVSITMLILVIGVNM 170
L+ ++ +S GASGA+FGL+GA + +I N Y ++ ++ M+IL+I +
Sbjct: 101 VMLYNND----YAVSAGASGAIFGLVGALVWIVIANRGFYEGVSRKQAVFMVILMIYYGV 156
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
+ G+DN AH GG V G ++ +L + +Y
Sbjct: 157 ST---QGVDNWAHGGGLVGGFVISIVLYRKKRY 186
>gi|395243825|ref|ZP_10420804.1| Putative uncharacterized protein [Lactobacillus hominis CRBIP
24.179]
gi|394483875|emb|CCI81812.1| Putative uncharacterized protein [Lactobacillus hominis CRBIP
24.179]
Length = 227
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 83/159 (52%), Gaps = 8/159 (5%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
+ A L +LG ++ +V + +R F+ +LH +HL +N++ I ++G LE G
Sbjct: 35 TNAAVLLRLGAMNNLIVASQDQFWRLFTAQFLHIGWLHLASNAVMIYYVGQYLEPIIGSW 94
Query: 97 RIGLLYVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK 155
R L+Y+LSG GG LLS D S ++ GAS ALFGL GA ++ N +
Sbjct: 95 RFLLIYLLSGVGGNLLSFACGSDYS-----VAAGASTALFGLFGAIIAIYFKNKQIPAIF 149
Query: 156 CVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILL 193
+ L L I +N+ + FM ID + HIGG AG L
Sbjct: 150 ALGRQALALAI-INLFLDLFMKDIDILGHIGGLAAGFFL 187
>gi|220918079|ref|YP_002493383.1| rhomboid family protein [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955933|gb|ACL66317.1| Rhomboid family protein [Anaeromyxobacter dehalogenans 2CP-1]
Length = 360
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL----EEDF 93
A L ++G L + V+DGE +R + +LH +HL+ N L GV L E
Sbjct: 44 DPALLARMGALD-HARVWDGEPWRLLTAAFLHVGPVHLVWN----LAFGVPLCALVERAI 98
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLS---EIITNWT 150
G R +YV S GG S L + +S GASGALFG+ GA L+ + +W
Sbjct: 99 GTRRFLAVYVASALGGSAASML------AAMPMSAGASGALFGVAGAMLALYRRAVGSWR 152
Query: 151 LYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+ I IL++G +A F+P ID AH GG G LG+I
Sbjct: 153 AFLASRDIILNGILLVGFALAGLFLP-IDGWAHAGGLATGAWLGWI 197
>gi|257413126|ref|ZP_04742087.2| integral membrane protein [Roseburia intestinalis L1-82]
gi|257204520|gb|EEV02805.1| integral membrane protein [Roseburia intestinalis L1-82]
Length = 366
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 84/153 (54%), Gaps = 4/153 (2%)
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
GG+ + + + +R F+ M++H + HL+ N + +G +LE G ++ ++Y+LS
Sbjct: 209 GGMYPEFIQINHQWWRIFTAMFIHFGLPHLVNNMVIFFCVGSRLERAAGHFKMFVIYMLS 268
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G GGGLLS S +S GASGA+FG +G + +I + + +++ +IL+
Sbjct: 269 GIGGGLLSYFMMLYSGD-YAVSAGASGAVFGTIGGLIWVVIRHRGRFEG--LTVKGMILM 325
Query: 166 IGVNMAIGFMP-GIDNMAHIGGFVAGILLGFIL 197
+++ GF GIDN H+GG + G L IL
Sbjct: 326 AVLSLYYGFSTIGIDNWCHVGGILTGFLAAMIL 358
>gi|160901697|ref|YP_001567278.1| rhomboid family protein [Petrotoga mobilis SJ95]
gi|160359341|gb|ABX30955.1| Rhomboid family protein [Petrotoga mobilis SJ95]
Length = 226
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 84/150 (56%), Gaps = 7/150 (4%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
++ GE +R + M++H + H+ N +A+ ++G +E +G R +Y+LSG G LL
Sbjct: 45 LITAGEWFRLITSMFVHGGLFHIFFNMIALFYVGNIVERAYGKERFISIYMLSGIFGNLL 104
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAI 172
+ L + ISVGASGA+FGL+G + T + V+ T L+ +I +N+
Sbjct: 105 THLFLPNA-----ISVGASGAIFGLIGLLFGAGFRHDTPTILRPVTGTALLPIILINVIW 159
Query: 173 GFMPG--IDNMAHIGGFVAGILLGFILLLR 200
GF+PG I+N AH+GG G G++ +R
Sbjct: 160 GFLPGANINNFAHLGGLGIGFTFGWLTSIR 189
>gi|403387738|ref|ZP_10929795.1| membrane associated peptidase [Clostridium sp. JC122]
Length = 216
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 15/159 (9%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
T + LGG+ NL+V +GE YR F+ +LHA+V+HL N +A+ IG +E+ G +
Sbjct: 49 DTRAIIVLGGMV-NLLVKNGEYYRLFTAGFLHASVLHLTLNMIALNAIGSIVEKVLGKGK 107
Query: 98 IGLLYVLS----GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
++Y+LS +G +++ + + + ISVGASGA+FGLLG+ L + N ++
Sbjct: 108 FIIVYILSLIFASYGSYVVANV-----KLGIGISVGASGAIFGLLGSLLIIVFLNKKVFG 162
Query: 154 NKCVS-ITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAG 190
+ IT +I+ VN+ IG F+P ID AH+ G +AG
Sbjct: 163 KTVLRGITEVIV---VNLLIGFFVPNIDITAHVTGGIAG 198
>gi|256072025|ref|XP_002572338.1| RHBDF1 protein (S54 family) [Schistosoma mansoni]
Length = 471
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
Query: 55 YDGEIYRFFSCMWLHANVIHL-LTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
Y ++YR F+ ++LHA V+HL LT + ++F+ LE+ G+ RI L+Y+LSG G L S
Sbjct: 341 YPNQMYRIFTSLFLHAGVLHLILTLGVQMIFMR-DLEKMIGWHRITLVYILSGCIGSLTS 399
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
+ Q+ G +GA F LLG SL ++I W + ++ IL++ + G
Sbjct: 400 GIFLP-----YQVETGPTGAQFALLGISLVDLIHCWQFLAHPWYALLRNILLVFILFTFG 454
Query: 174 FMPGIDNMAHIGGFVAG 190
+P IDN A+ G F++
Sbjct: 455 LLPWIDNYANAGSFLSA 471
>gi|393912104|gb|EFO22618.2| rhomboid family protein [Loa loa]
Length = 1003
Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 60 YRFFSCMWLHANVIH-LLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
YR F ++LHA +IH +LT + +L++ LE+ G+ R+ LLY++ G GG L +
Sbjct: 798 YRLFIPLFLHAGIIHCILTVFIQMLYMR-DLEKLLGWARVALLYMVPGIGGYLAGAIFVP 856
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
+ VG +G+ G+ A +++ +W L +I L L A+G +P +
Sbjct: 857 YKPE-----VGPAGSHVGMFAAMYVDVVYSWNLLERPWHAIMQLSLFTVAVFAVGTLPWV 911
Query: 179 DNMAHIGGFVAGILLGFILL 198
DN AH GF+ GIL+ +L
Sbjct: 912 DNWAHFFGFIFGILVSLAVL 931
>gi|312077777|ref|XP_003141452.1| rhomboid family protein [Loa loa]
Length = 989
Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/140 (32%), Positives = 74/140 (52%), Gaps = 7/140 (5%)
Query: 60 YRFFSCMWLHANVIH-LLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
YR F ++LHA +IH +LT + +L++ LE+ G+ R+ LLY++ G GG L +
Sbjct: 784 YRLFIPLFLHAGIIHCILTVFIQMLYMR-DLEKLLGWARVALLYMVPGIGGYLAGAIFVP 842
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
+ VG +G+ G+ A +++ +W L +I L L A+G +P +
Sbjct: 843 YKPE-----VGPAGSHVGMFAAMYVDVVYSWNLLERPWHAIMQLSLFTVAVFAVGTLPWV 897
Query: 179 DNMAHIGGFVAGILLGFILL 198
DN AH GF+ GIL+ +L
Sbjct: 898 DNWAHFFGFIFGILVSLAVL 917
>gi|444727239|gb|ELW67740.1| Inactive rhomboid protein 1 [Tupaia chinensis]
Length = 857
Score = 73.9 bits (180), Expect = 6e-11, Method: Composition-based stats.
Identities = 54/197 (27%), Positives = 89/197 (45%), Gaps = 36/197 (18%)
Query: 58 EIYRFFSCMWLHAN-------------VIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
+ YR + ++LHA V+H L + + + LE+ G+ RI ++Y+L
Sbjct: 641 QFYRLWLSLFLHAGQVTPSGLGGWSWGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLL 700
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SG G L S + + VG +G+ FG+L E+ +W + + L+
Sbjct: 701 SGVTGNLASAIFL-----PYRAEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLLA 755
Query: 165 VIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKY 224
V+ A G +P IDN AHI GF++G+ L F L PYI+ G K+
Sbjct: 756 VVLSLFAFGLLPWIDNFAHISGFISGLFLSFAFL----------PYISFG--------KF 797
Query: 225 QCHQKLLWVISVVVLFV 241
++K +I V+F+
Sbjct: 798 DLYRKRCQIIVFQVVFL 814
>gi|433629203|ref|YP_007262831.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070010]
gi|432160796|emb|CCK58126.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070010]
Length = 249
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 47 GLSRNLVVY-----DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
GL R L ++ G+ YR + +LH +HLL N A+ +G LE G LR G L
Sbjct: 59 GLERQLALWPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGAL 118
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y +S GG +L L + T GASGA+FGL GA+ + + +
Sbjct: 119 YAVSALGGSVLVYLIAPLNTAT----AGASGAVFGLFGATF-------MVARRLHLDVRW 167
Query: 162 LILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
++ +I +N+A F+ P I H+GG V G L+G + P+
Sbjct: 168 VVALIVINLAFTFLAPAISWQGHVGGLVTGALVGATYVYAPR 209
>gi|116333635|ref|YP_795162.1| membrane-associated serine protease [Lactobacillus brevis ATCC 367]
gi|116098982|gb|ABJ64131.1| Membrane-associated serine protease [Lactobacillus brevis ATCC 367]
Length = 226
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 87/162 (53%), Gaps = 9/162 (5%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ G+ +R + M+LH H+ N + + F+G +LE FG R ++++++G
Sbjct: 48 GAKVNPLIQQGQWWRLITPMFLHIGFTHIFLNMVTLYFVGTQLEAAFGHARFLIIFLVAG 107
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
GG + S + +S GAS A+FGL GA + + W + ++ T L V+
Sbjct: 108 IGGNVASFCFLNS------LSAGASTAIFGLFGAFMMLGESFWQNPIIRQLARTFLAFVV 161
Query: 167 GVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVS 207
+N+A F PGID H+GG +AG L+ + + + PQ G VS
Sbjct: 162 -MNIAFDLFTPGIDLAGHLGGLIAGFLVAYTVGV-PQIGRVS 201
>gi|449302177|gb|EMC98186.1| hypothetical protein BAUCODRAFT_121073 [Baudoinia compniacensis
UAMH 10762]
Length = 520
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 77/144 (53%), Gaps = 4/144 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF ++LHA +IH+ N L L +G +E+ G +R ++Y +G G +L
Sbjct: 247 QWWRFIVPIFLHAGIIHIAFNLLLQLTLGADVEKLIGSIRFTIVYFAAGIFGFVLG---- 302
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
S G SG+LFG+L +L +++ W + +++ + + +G +PG
Sbjct: 303 GNFAANGIASCGCSGSLFGILAITLLDLLYTWHQREGPIKDLLFILIDVIIAFVLGLLPG 362
Query: 178 IDNMAHIGGFVAGILLGFILLLRP 201
+DN +HIGGF+ G++LG +L P
Sbjct: 363 LDNFSHIGGFLMGLVLGVCILRSP 386
>gi|403046456|ref|ZP_10901925.1| hypothetical protein SOJ_15340 [Staphylococcus sp. OJ82]
gi|402763152|gb|EJX17245.1| hypothetical protein SOJ_15340 [Staphylococcus sp. OJ82]
Length = 485
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 87/159 (54%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S + +GGL VV+ GE YR S ++LH + H+L N L++ G +E G R
Sbjct: 181 SDLKMLDVGGLVHFNVVH-GEWYRLISSIFLHYDFEHILMNMLSLFIFGKIVESIVGHWR 239
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y+++G G S S +S GASGA+FGL+GA + + K +
Sbjct: 240 MIVIYIVAGLFGNFASL-----SFNIDTVSAGASGAIFGLIGAIFGFMYVG-KQFNRKLI 293
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+++LVI + +++ FM I+ +AHIGGFV G+L+ I
Sbjct: 294 GQLLIVLVIMIGLSL-FMQNINIVAHIGGFVGGLLITLI 331
>gi|315653611|ref|ZP_07906531.1| membrane-associated serine protease [Lactobacillus iners ATCC
55195]
gi|315488973|gb|EFU78615.1| membrane-associated serine protease [Lactobacillus iners ATCC
55195]
Length = 232
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L G ++ VV + +R F+ ++HA H++ N + I F G+ LE+ G +R +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIRYLTI 104
Query: 102 YVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT 160
Y+LSG GG LLS L QD IS GAS A+FGL+G+ L+ N +
Sbjct: 105 YLLSGVGGNLLSFALGQDNV-----ISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQ 159
Query: 161 MLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
+L+I + FMP +D + HIGG + G LL IL
Sbjct: 160 AFLLLICNIVVDFFMPSVDIIGHIGGTITGFLLTIIL 196
>gi|400286679|ref|ZP_10788711.1| rhomboid-like protein [Psychrobacter sp. PAMC 21119]
Length = 326
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 64/181 (35%), Positives = 95/181 (52%), Gaps = 9/181 (4%)
Query: 21 LGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSL 80
+G F Q + PST L K G + + D + +R S +LH ++HLL N
Sbjct: 21 IGLFIMQVLTGVDANNPSTEALLKWGANALPFTMGD-DPWRLVSSAFLHIGLMHLLFNGF 79
Query: 81 AILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC--LHQDESQQTLQ--ISVGASGALFG 136
A+ F G E FG + L++L+ GG LL+ Q + T Q IS GASG + G
Sbjct: 80 AMYFFGQVAEPMFGSAKFLALFLLAAIGGNLLNSYVTWQGILEGTGQPGISAGASGGIMG 139
Query: 137 LLGASLSEIITNWTLYTNKCV-SITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLG 194
+GA+L I + + N V ++ LIL++G+N+ GF +PGIDN HIGG V G+++
Sbjct: 140 -IGAAL-LIAAVFKISVNGLVLNLKSLILIMGINLVYGFAVPGIDNAGHIGGAVTGLIIA 197
Query: 195 F 195
Sbjct: 198 L 198
>gi|309805213|ref|ZP_07699265.1| peptidase, S54 family [Lactobacillus iners LactinV 09V1-c]
gi|308165447|gb|EFO67678.1| peptidase, S54 family [Lactobacillus iners LactinV 09V1-c]
Length = 232
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L G ++ VV + +R F+ ++HA H++ N + I F G+ LE+ G +R +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIRYLTI 104
Query: 102 YVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT 160
Y+LSG GG LLS L QD IS GAS A+FGL+G+ L+ N +
Sbjct: 105 YLLSGVGGNLLSFALGQDNV-----ISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQ 159
Query: 161 MLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
+L+I + FMP +D + HIGG + G LL IL
Sbjct: 160 AFLLLICNIVVDFFMPSVDIIGHIGGTITGFLLTIIL 196
>gi|410728950|ref|ZP_11367038.1| putative membrane protein [Clostridium sp. Maddingley MBC34-26]
gi|410596504|gb|EKQ51173.1| putative membrane protein [Clostridium sp. Maddingley MBC34-26]
Length = 332
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 10/139 (7%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N+++ G+I+R F+C +LH+ +IH+ N ++ IG ++++ FG ++ ++Y S
Sbjct: 180 GAKVNILINQGQIWRLFTCAFLHSGLIHIACNMYSLYIIGPQIQQIFGTVKYLIIYACSC 239
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLS-EIITNWTLYTNKCVSITMLILV 165
LLS S ISVGASGA+FGL+GA L+ II + SI V
Sbjct: 240 LTASLLSYYMSPNS-----ISVGASGAIFGLMGALLAFAIIERNRIQKRFLFSIMQ---V 291
Query: 166 IGVNMAIGF-MPGIDNMAH 183
I +N+ IG + IDN AH
Sbjct: 292 ISINLFIGLSIKNIDNFAH 310
>gi|365902867|ref|ZP_09440690.1| membrane-associated serine protease [Lactobacillus malefermentans
KCTC 3548]
Length = 226
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 107/213 (50%), Gaps = 27/213 (12%)
Query: 33 SLFGPSTAT--LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
++ G ST T L + G +L+ G+ +R F+ ++LH H+L N + + F+G+++E
Sbjct: 30 TVMGGSTNTYVLIQFGAKVSSLI-QAGQWWRLFTPVFLHIGFEHILLNGITLYFLGLQIE 88
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW- 149
FG R +++V++ GG L S + S +S GAS A+FGL GA L + W
Sbjct: 89 RIFGHWRYFIIFVVTAIGGNLASFVFSPNS-----LSAGASTAIFGLFGAFLMLGESFWE 143
Query: 150 TLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGP 209
Y + L +V+ + + PGID HIGG VAG L+G+++ L P+
Sbjct: 144 NPYIRQMTKTFALFIVLNLGFDL-LSPGIDLSGHIGGLVAGFLIGYVVAL-PK------- 194
Query: 210 YIAPGYELNHKKPKYQCHQKLLWVISVVVLFVW 242
+ K ++++ V+ ++V FVW
Sbjct: 195 ---------NILGKVSVAKRVIAVVVLIVGFVW 218
>gi|325912121|ref|ZP_08174519.1| peptidase, S54 family [Lactobacillus iners UPII 143-D]
gi|325476071|gb|EGC79239.1| peptidase, S54 family [Lactobacillus iners UPII 143-D]
Length = 232
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L G ++ VV + +R F+ ++HA H++ N + I F G+ LE+ G +R +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIRYLTI 104
Query: 102 YVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT 160
Y+LSG GG LLS L QD IS GAS A+FGL+G+ L+ N +
Sbjct: 105 YLLSGVGGNLLSFALGQDNV-----ISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQ 159
Query: 161 MLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
+L+I + FMP +D + HIGG + G LL IL
Sbjct: 160 AFLLLICNIVVDFFMPSVDIIGHIGGTITGFLLTIIL 196
>gi|90653004|gb|ABD95905.1| RHBDG1 [Homo sapiens]
Length = 862
Score = 73.6 bits (179), Expect = 6e-11, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 30/190 (15%)
Query: 58 EIYRFFSCMWLHAN-------VIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G
Sbjct: 652 QFYRLWLSLFLHAGQVTLWAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGN 711
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
L S + + VG +G+ FG+L E+ +W + + L+ V+
Sbjct: 712 LASAIFL-----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLF 766
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKL 230
G +P IDN AHI GF++G+ L F L PYI+ G K+ ++K
Sbjct: 767 TFGLLPWIDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKR 808
Query: 231 LWVISVVVLF 240
+I V+F
Sbjct: 809 CQIIIFQVVF 818
>gi|14336678|gb|AAK61212.1|AE006462_4 unknown [Homo sapiens]
gi|119606279|gb|EAW85873.1| rhomboid 5 homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 862
Score = 73.6 bits (179), Expect = 6e-11, Method: Composition-based stats.
Identities = 52/190 (27%), Positives = 87/190 (45%), Gaps = 30/190 (15%)
Query: 58 EIYRFFSCMWLHAN-------VIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G
Sbjct: 652 QFYRLWLSLFLHAGQVTLWAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGN 711
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
L S + + VG +G+ FG+L E+ +W + + L+ V+
Sbjct: 712 LASAIFL-----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLF 766
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKL 230
G +P IDN AHI GF++G+ L F L PYI+ G K+ ++K
Sbjct: 767 TFGLLPWIDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKR 808
Query: 231 LWVISVVVLF 240
+I V+F
Sbjct: 809 CQIIIFQVVF 818
>gi|312872929|ref|ZP_07732989.1| peptidase, S54 family [Lactobacillus iners LEAF 2062A-h1]
gi|311091451|gb|EFQ49835.1| peptidase, S54 family [Lactobacillus iners LEAF 2062A-h1]
Length = 232
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L G ++ VV + +R F+ ++HA H++ N + I F G+ LE+ G +R +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIRYLTI 104
Query: 102 YVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT 160
Y+LSG GG LLS L QD IS GAS A+FGL+G+ L+ N +
Sbjct: 105 YLLSGVGGNLLSFALGQDNV-----ISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQ 159
Query: 161 MLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
+L+I + FMP +D + HIGG + G LL IL
Sbjct: 160 AFLLLICNIVVDFFMPSVDIIGHIGGTITGFLLTIIL 196
>gi|259503580|ref|ZP_05746482.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
gi|259168453|gb|EEW52948.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
Length = 219
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/181 (37%), Positives = 97/181 (53%), Gaps = 17/181 (9%)
Query: 33 SLFGPST--ATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
+L G ST A L + G L + V GE +R + +++H HLL NS+ + FIG+ +E
Sbjct: 27 TLAGGSTTPAVLIRFGAL-QAAAVQAGEWWRLLTPVFVHIGFAHLLINSITLYFIGMYIE 85
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
+ FG R+ ++Y+ S G LLS IS GAS +FGL GA I+ T
Sbjct: 86 QLFGHWRMLVIYLGSAIVGNLLSAYWLPAG-----ISAGASTGIFGLFGAF---IMLGAT 137
Query: 151 LYTNKC---VSITMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQYGYV 206
N+ +S LILV+ +N+A M PGID H+GGF+ G LL + L+ P+ G V
Sbjct: 138 FRENQALRMLSRQFLILVV-LNIATDLMVPGIDLAGHLGGFIGGFLLAY-LVGAPRLGRV 195
Query: 207 S 207
+
Sbjct: 196 N 196
>gi|324503187|gb|ADY41389.1| Rhomboid family member 1 [Ascaris suum]
Length = 952
Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 68/138 (49%), Gaps = 5/138 (3%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR F ++LHA +IH L + LE+ G+ R+ ++Y+ +G GG L S +
Sbjct: 745 QFYRLFIPIFLHAGIIHCAITVLVQWYYMRDLEKLIGWARMAIVYMGAGIGGSLASAIFL 804
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ G+ A ++II NW L ++ L + V G +P
Sbjct: 805 PYRPE-----VGPAGSHIGIFAAMYTDIIYNWRLIQRPWSALRELAMFTLVLFICGLLPW 859
Query: 178 IDNMAHIGGFVAGILLGF 195
IDN AH+ GF+ G LL
Sbjct: 860 IDNWAHLFGFIFGFLLSL 877
>gi|392972219|ref|ZP_10337611.1| rhomboid family protein [Staphylococcus equorum subsp. equorum Mu2]
gi|392509932|emb|CCI60913.1| rhomboid family protein [Staphylococcus equorum subsp. equorum Mu2]
Length = 391
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 87/159 (54%), Gaps = 8/159 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S + +GGL VV+ GE YR S ++LH + H+L N L++ G +E G R
Sbjct: 87 SDLKMLDVGGLVHFNVVH-GEWYRLISSIFLHYDFEHILMNMLSLFIFGKIVESIVGHWR 145
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++Y+++G G S S +S GASGA+FGL+GA + + K +
Sbjct: 146 MIVIYIVAGLFGNFASL-----SFNIDTVSAGASGAIFGLIGAIFGFMYVG-KQFNRKLI 199
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+++LVI + +++ FM I+ +AHIGGFV G+L+ I
Sbjct: 200 GQLLIVLVIMIGLSL-FMQNINIVAHIGGFVGGLLITLI 237
>gi|418995635|ref|ZP_13543249.1| rhomboid family protein [Escherichia coli DEC1A]
gi|377849025|gb|EHU14001.1| rhomboid family protein [Escherichia coli DEC1A]
Length = 199
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
GE +R S ++LH++ HLL N A+L +G E G R+ ++++ SG GGL+S
Sbjct: 58 SGEPWRLLSSVFLHSSFSHLLMNMFALLAVGTVAERILGKWRLLIIWLFSGIFGGLISAC 117
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITN--WTLYTNKCVSITMLILVIGVNMAIG 173
+ + + ISVGASGA+ G+ GA+++ + + T + N+ +L +V +
Sbjct: 118 YALRESEQIVISVGASGAIMGIAGAAIATQLASGAGTHHKNQRRVFPLLGMVALTLLYGT 177
Query: 174 FMPGIDNMAHIGGFVAG 190
GIDN HIGG +AG
Sbjct: 178 RQTGIDNACHIGGLIAG 194
>gi|336435773|ref|ZP_08615487.1| hypothetical protein HMPREF0988_01072 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336000268|gb|EGN30420.1| hypothetical protein HMPREF0988_01072 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 207
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E YR + M+LH + HLL N + + +G LE G +R L+Y+ SG GG LLS L
Sbjct: 52 EDYRLVTSMFLHFGMQHLLNNMVMLGALGWNLEAVTGKIRFILIYMFSGIGGNLLS-LFL 110
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF-MP 176
+ + +S GASGA+FGL+GA L I N VS L ++ +++ G
Sbjct: 111 NRNSGVYVVSAGASGAVFGLMGALLFAAIRNRGHVGR--VSRRGLFFMVALSLYFGLSSS 168
Query: 177 GIDNMAHIGGFVAGILLGFIL 197
G+DN AHIGG + G LL +L
Sbjct: 169 GVDNAAHIGGLICGFLLEAVL 189
>gi|167760294|ref|ZP_02432421.1| hypothetical protein CLOSCI_02667 [Clostridium scindens ATCC 35704]
gi|336421421|ref|ZP_08601579.1| hypothetical protein HMPREF0993_00956 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167662177|gb|EDS06307.1| peptidase, S54 family [Clostridium scindens ATCC 35704]
gi|336000700|gb|EGN30847.1| hypothetical protein HMPREF0993_00956 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 204
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 10/179 (5%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ +E+ LF + + G + + GE YR F+ M+LH HL N + ++
Sbjct: 26 SFQGATEDGLF------MLEHGAMYVPFITEQGEYYRMFTSMFLHFGFEHLFNNMITLVL 79
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
IG LE + G +R ++Y+LSG GG +LS D I+ GASGA+FG++GA L
Sbjct: 80 IGWNLEVEIGSIRFLVIYILSGLGGNILSSW-WDIRLADYAIAAGASGAIFGIIGALLYV 138
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLRPQ 202
I N + +S ++ +I + + G+ G+DNMAHIGG G LL +L + +
Sbjct: 139 AIRNRGRIGD--ISGRGIVFMIFITLYYGYSSGGVDNMAHIGGLTTGFLLCILLYWKRK 195
>gi|183598259|ref|ZP_02959752.1| hypothetical protein PROSTU_01644 [Providencia stuartii ATCC 25827]
gi|386744560|ref|YP_006217739.1| hypothetical protein S70_16165 [Providencia stuartii MRSN 2154]
gi|1168254|sp|P46116.1|AARA_PROST RecName: Full=Rhomboid protease AarA; AltName: Full=Intramembrane
serine protease
gi|453686|gb|AAA61597.1| 2'-N-acetyltransferase [Providencia stuartii]
gi|188020429|gb|EDU58469.1| rhomboid protease AarA [Providencia stuartii ATCC 25827]
gi|384481253|gb|AFH95048.1| hypothetical protein S70_16165 [Providencia stuartii MRSN 2154]
Length = 281
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
G+ +R+ M LH+N HL N LA+ IG+ E +G ++ +Y++SG G L S
Sbjct: 66 GDWWRYPISMMLHSNGTHLAFNCLALFVIGIGCERAYGKFKLLAIYIISGIGAALFSAYW 125
Query: 117 Q----------DESQQTLQISVGASGALFGLLGAS---LSEIITNW-----TLYTNKCVS 158
Q +S + I VGASGA+ G+ AS L +++ N + +
Sbjct: 126 QYYEISNSDLWTDSTVYITIGVGASGAIMGIAAASVIYLIKVVINKPNPHPVIQRRQKYQ 185
Query: 159 ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ LI +I + + G G+DN AHIGG + G L+ +L P
Sbjct: 186 LYNLIAMIALTLINGLQSGVDNAAHIGGAIIGALISIAYILVPH 229
>gi|302531387|ref|ZP_07283729.1| predicted protein [Streptomyces sp. AA4]
gi|302440282|gb|EFL12098.1| predicted protein [Streptomyces sp. AA4]
Length = 320
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/177 (32%), Positives = 88/177 (49%), Gaps = 12/177 (6%)
Query: 31 ENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
SLF A ++ LG L + GE +R F+ +LH IH+ N+ ++ +G LE
Sbjct: 106 AKSLFDNGAARIEMLGELWTYPALGGGEWWRIFTSGFLHYGPIHIAANAFSLWMMGRALE 165
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
+ FG R LY +S FG L ++ S GASGA+FGLLG S + I+
Sbjct: 166 QVFGKSRFLALYFVSMFGASTAVLLFDAPNRP----SAGASGAIFGLLG-SYAVIVLKLR 220
Query: 151 LYTNKCVSITMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQYGYV 206
L + T L++ + +N + F +P I +AH+GG V G L+ +L P+ V
Sbjct: 221 L------NPTALLINLVINAYVTFTIPQISILAHVGGLVTGALVAAAILYAPERNRV 271
>gi|116872768|ref|YP_849549.1| rhomboid family membrane protein [Listeria welshimeri serovar 6b
str. SLCC5334]
gi|116741646|emb|CAK20770.1| rhomboid family membrane protein [Listeria welshimeri serovar 6b
str. SLCC5334]
Length = 512
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 93/174 (53%), Gaps = 12/174 (6%)
Query: 33 SLFGPSTAT--LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
+L G ST T L K GG N ++Y GE +RF S ++LH+ ++HL +N++ + +G E
Sbjct: 200 ALQGGSTNTFNLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAE 258
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
+G R L+ +L G G + S + +SVGAS A+F ++GA L ++
Sbjct: 259 RIYGKWRYILILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYLVVLKPN 312
Query: 151 LYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
LY K + +++ LV VN+ I F ID HIGG V G LL L L Q+
Sbjct: 313 LYA-KTIGVSIASLV-AVNLFIDLFSTQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|452845449|gb|EME47382.1| hypothetical protein DOTSEDRAFT_166397 [Dothistroma septosporum
NZE10]
Length = 505
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 82/158 (51%), Gaps = 4/158 (2%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF ++LHA +IH+ N L + +G +E G +R +LY SG G +L
Sbjct: 241 QWWRFIVPIFLHAGIIHIGFNLLLQMTLGRDVELQIGSIRFAILYFASGIFGFVLG---- 296
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
T S G SG+LFG+L +L +++ +W + + +++ + + +G +PG
Sbjct: 297 GNFAATGIASTGCSGSLFGILALTLLDLLYHWRERNSPIKDLLFILVDVIIAFVLGLLPG 356
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGY 215
+DN +HIGGF+ G++LG LL P + P Y
Sbjct: 357 LDNFSHIGGFLMGLVLGVFLLRSPHAVARRTSQVPPDY 394
>gi|309810248|ref|ZP_07704093.1| peptidase, S54 family [Lactobacillus iners SPIN 2503V10-D]
gi|312874222|ref|ZP_07734256.1| peptidase, S54 family [Lactobacillus iners LEAF 2052A-d]
gi|308169520|gb|EFO71568.1| peptidase, S54 family [Lactobacillus iners SPIN 2503V10-D]
gi|311090292|gb|EFQ48702.1| peptidase, S54 family [Lactobacillus iners LEAF 2052A-d]
Length = 232
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L G ++ VV + +R F+ ++HA H++ N + I F G+ LE+ G +R +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHVICNIVMIYFFGMYLEQFLGHIRYLTI 104
Query: 102 YVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT 160
Y+LSG GG LLS L QD IS GAS A+FGL+G+ L+ N +
Sbjct: 105 YLLSGVGGNLLSFALGQDNV-----ISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQ 159
Query: 161 MLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
+L+I + FMP +D + HIGG + G LL IL
Sbjct: 160 AFLLLICNIVVDFFMPSVDIIGHIGGTITGFLLTIIL 196
>gi|290893553|ref|ZP_06556536.1| rhomboid family protein [Listeria monocytogenes FSL J2-071]
gi|290556898|gb|EFD90429.1| rhomboid family protein [Listeria monocytogenes FSL J2-071]
Length = 518
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++HL +N++ +
Sbjct: 206 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYI 258
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 259 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 312
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 313 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|309792360|ref|ZP_07686828.1| Rhomboid family protein [Oscillochloris trichoides DG-6]
gi|308225581|gb|EFO79341.1| Rhomboid family protein [Oscillochloris trichoides DG6]
Length = 240
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 30/204 (14%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ G +R S +LH ++IH+L N A+ +G + E +G R LY L+G
Sbjct: 49 GAKVNELIAAGAYWRLLSATFLHGSLIHILFNGYALYALGPETERIYGTRRFLALYFLAG 108
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV-------SI 159
GG L S L +SVGASGA+FGL+G Y N+ V +
Sbjct: 109 LGGSLASYLLSPS------VSVGASGAIFGLIGG------LGIFYYLNRAVLGNFGKAQV 156
Query: 160 TMLILVIGVNMAIGF-MPG-IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYEL 217
+ V +N+ IGF P IDN H+GG V GI+ G+ L P++ + PG+
Sbjct: 157 QNMATVALINLFIGFSAPSIIDNWGHLGGLVGGIVAGWA--LAPRF------MVDPGFYP 208
Query: 218 NHKKPKYQCHQKLLWVISVVVLFV 241
+ Y Q +W +++V++ +
Sbjct: 209 PLMRRTYPA-QGWMWAVALVLVML 231
>gi|226223938|ref|YP_002758045.1| hypothetical protein Lm4b_01345 [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|386732075|ref|YP_006205571.1| rhomboid family protein [Listeria monocytogenes 07PF0776]
gi|405752554|ref|YP_006676019.1| rhomboid family protein [Listeria monocytogenes SLCC2378]
gi|406704108|ref|YP_006754462.1| rhomboid family protein [Listeria monocytogenes L312]
gi|225876400|emb|CAS05109.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|384390833|gb|AFH79903.1| rhomboid family protein [Listeria monocytogenes 07PF0776]
gi|404221754|emb|CBY73117.1| rhomboid family protein [Listeria monocytogenes SLCC2378]
gi|406361138|emb|CBY67411.1| rhomboid family protein [Listeria monocytogenes L312]
Length = 512
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++HL +N++ +
Sbjct: 200 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYI 252
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 253 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 306
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 307 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|404280891|ref|YP_006681789.1| rhomboid family protein [Listeria monocytogenes SLCC2755]
gi|404286756|ref|YP_006693342.1| rhomboid family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405749679|ref|YP_006673145.1| rhomboid family protein [Listeria monocytogenes ATCC 19117]
gi|405755466|ref|YP_006678930.1| rhomboid family protein [Listeria monocytogenes SLCC2540]
gi|417317486|ref|ZP_12104103.1| rhomboid family protein [Listeria monocytogenes J1-220]
gi|328475056|gb|EGF45844.1| rhomboid family protein [Listeria monocytogenes J1-220]
gi|404218879|emb|CBY70243.1| rhomboid family protein [Listeria monocytogenes ATCC 19117]
gi|404224666|emb|CBY76028.1| rhomboid family protein [Listeria monocytogenes SLCC2540]
gi|404227526|emb|CBY48931.1| rhomboid family protein [Listeria monocytogenes SLCC2755]
gi|404245685|emb|CBY03910.1| rhomboid family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 512
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++HL +N++ +
Sbjct: 200 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYI 252
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 253 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 306
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 307 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|375088668|ref|ZP_09735006.1| hypothetical protein HMPREF9703_01088 [Dolosigranulum pigrum ATCC
51524]
gi|374561633|gb|EHR32972.1| hypothetical protein HMPREF9703_01088 [Dolosigranulum pigrum ATCC
51524]
Length = 232
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 12/163 (7%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
+L +G L++Y+ E +R + ++LH V HLL N L + F+G ++E FG +R L
Sbjct: 42 SLIIMGAKFNELIIYNNEWWRLITPIFLHIGVPHLLFNMLVVYFLGQQIEFIFGHVRFAL 101
Query: 101 LYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGAS--LSEIITNWTLYTNKCVS 158
LY+ SG G S +S GAS A+FGL ++ LS++ +
Sbjct: 102 LYLFSGLMGNAFSFAFNTS------LSAGASTAIFGLFVSTIVLSKLFPHVRELGMLARQ 155
Query: 159 ITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFILLLR 200
MLI +N+ FM G+DNM HIGG V G L+ + + ++
Sbjct: 156 YGMLIF---LNIVFSFMSGGVDNMGHIGGLVGGYLISYAISVK 195
>gi|422809417|ref|ZP_16857828.1| rhomboid family protein [Listeria monocytogenes FSL J1-208]
gi|378753031|gb|EHY63616.1| rhomboid family protein [Listeria monocytogenes FSL J1-208]
Length = 518
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++HL +N++ +
Sbjct: 206 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYI 258
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 259 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 312
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 313 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|375308022|ref|ZP_09773309.1| rhomboid family protein [Paenibacillus sp. Aloe-11]
gi|375080353|gb|EHS58574.1| rhomboid family protein [Paenibacillus sp. Aloe-11]
Length = 207
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/167 (33%), Positives = 86/167 (51%), Gaps = 9/167 (5%)
Query: 27 QPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIG 86
Q S+NSL TL + G L N + +++R+ S ++LHA HLL NS AIL
Sbjct: 36 QGGSQNSL------TLIRYGALI-NEAPFTDQLWRYVSAIFLHAGFDHLLFNSFAILVFA 88
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
LE G LR LLY+++G G ++S H + +T +SVGASGA++G+ GA L +
Sbjct: 89 PPLERLLGSLRYVLLYLVTGIVGNVMSIAHYNMVAET-TVSVGASGAIYGIYGAFLYVAL 147
Query: 147 TNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
+ + +L G+ + + I+ AH GG ++G L
Sbjct: 148 FQRSFMDDASRKTLYTLLGFGILFSFA-VANINWTAHFGGLLSGFFL 193
>gi|422409553|ref|ZP_16486514.1| rhomboid family protein [Listeria monocytogenes FSL F2-208]
gi|313608952|gb|EFR84701.1| rhomboid family protein [Listeria monocytogenes FSL F2-208]
Length = 518
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++HL +N++ +
Sbjct: 206 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYI 258
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 259 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 312
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 313 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|217964517|ref|YP_002350195.1| rhomboid family protein [Listeria monocytogenes HCC23]
gi|386026709|ref|YP_005947485.1| hypothetical protein LMM7_1422 [Listeria monocytogenes M7]
gi|217333787|gb|ACK39581.1| rhomboid family protein [Listeria monocytogenes HCC23]
gi|336023290|gb|AEH92427.1| hypothetical protein LMM7_1422 [Listeria monocytogenes M7]
Length = 518
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++HL +N++ +
Sbjct: 206 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYI 258
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 259 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 312
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 313 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|156098458|ref|XP_001615261.1| rhomboid-like protease 1 [Plasmodium vivax Sal-1]
gi|148804135|gb|EDL45534.1| rhomboid-like protease 1, putative [Plasmodium vivax]
Length = 276
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 101/209 (48%), Gaps = 22/209 (10%)
Query: 37 PSTATLKKLGG--LSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
PS + L LG SR + GEI+R ++LHAN+ H N L +G LE+++G
Sbjct: 79 PSDSLLITLGANVASR---IKQGEIHRLILPIFLHANIFHTFFNVFFQLRMGFTLEKNYG 135
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
+++ +LY L+G G +LS S I VGAS + GLLG SE+I W + +
Sbjct: 136 IVKVIILYFLTGIYGNILS-----SSVTYCPIKVGASTSGMGLLGVVTSELILLWHVIRH 190
Query: 155 KCVSITMLILVIGVNMAIGFM---PGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYI 211
+ + +I ++ F ID++ H+GG ++GI +G + Y S
Sbjct: 191 RERVVFNIIFFSLISFFYYFTFNGSNIDHVGHLGGLLSGISMGIL--------YNSQMEN 242
Query: 212 APGYELNHKKPKYQCHQKLLWVISVVVLF 240
P + + K Y C LL ++ +VLF
Sbjct: 243 KPSWYDHMKMASYAC-LALLAIVPPIVLF 270
>gi|312871798|ref|ZP_07731886.1| peptidase, S54 family [Lactobacillus iners LEAF 3008A-a]
gi|312875588|ref|ZP_07735589.1| peptidase, S54 family [Lactobacillus iners LEAF 2053A-b]
gi|311088842|gb|EFQ47285.1| peptidase, S54 family [Lactobacillus iners LEAF 2053A-b]
gi|311092740|gb|EFQ51096.1| peptidase, S54 family [Lactobacillus iners LEAF 3008A-a]
Length = 232
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L G ++ VV + +R F+ ++HA H++ N + I F G+ LE+ G +R +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFLEQFLGHIRYLTI 104
Query: 102 YVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT 160
Y+LSG GG LLS L QD IS GAS A+FGL+G+ L+ N +
Sbjct: 105 YLLSGVGGNLLSFALGQDNV-----ISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQ 159
Query: 161 MLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
+L+I + FMP +D + HIGG + G LL IL
Sbjct: 160 AFLLLICNIVVDFFMPSVDIIGHIGGTITGFLLTIIL 196
>gi|294953649|ref|XP_002787869.1| rhomboid protease, putative [Perkinsus marinus ATCC 50983]
gi|239902893|gb|EER19665.1| rhomboid protease, putative [Perkinsus marinus ATCC 50983]
Length = 403
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/172 (32%), Positives = 88/172 (51%), Gaps = 11/172 (6%)
Query: 36 GPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGF 95
P+T TL +G S + G I+R + M LHAN++HL N L +G +E FGF
Sbjct: 191 APATCTLYLMGA-SWGPSIAKGGIWRLLAPMGLHANMLHLFFNIFFQLRMGFGMERQFGF 249
Query: 96 LRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTL---Y 152
+ LY+L G G L+S + +++VGAS A FGL+G L+EI +W + +
Sbjct: 250 KKFMGLYMLCGLVGNLISV-----AVDPFKLAVGASTAGFGLVGVWLAEIFLSWHVLGPH 304
Query: 153 TNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP-QY 203
++ + + + + +G + P ID H GG +AG L ++ P QY
Sbjct: 305 RDRTM-VWVAFVTVGCIVMSTMQPNIDMFGHFGGALAGFLAATMISDMPDQY 355
>gi|374340237|ref|YP_005096973.1| hypothetical protein Marpi_1272 [Marinitoga piezophila KA3]
gi|372101771|gb|AEX85675.1| putative membrane protein [Marinitoga piezophila KA3]
Length = 235
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 90/167 (53%), Gaps = 6/167 (3%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
++ TL G L+ + +RF + +++H ++H+ N A+ ++G +E +G +
Sbjct: 40 NSYTLIVAGAQYGKLITIYHQYFRFITALFVHGGILHISFNLYALYYLGNIVERVYGPYK 99
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+Y+ SG GGG+L+ + + SVGASGA+FGL+G + T K +
Sbjct: 100 FLTIYLASGIGGGILTQIFIPNA-----FSVGASGAIFGLIGLLFGAGFRDDTPPMLKPM 154
Query: 158 SITMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQY 203
+ T L+ VI +N+ +GF GI+N AHIGG + G G++ +R Y
Sbjct: 155 TGTALLPVILINLFLGFTSSGINNFAHIGGLLVGFTFGWLTSVRDTY 201
>gi|259500554|ref|ZP_05743456.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
gi|302191244|ref|ZP_07267498.1| membrane-associated serine protease [Lactobacillus iners AB-1]
gi|259167938|gb|EEW52433.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
Length = 232
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L G ++ VV + +R F+ ++HA H++ N + I F G+ LE+ G +R +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFLEQFLGHIRYLTI 104
Query: 102 YVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT 160
Y+LSG GG LLS L QD IS GAS A+FGL+G+ L+ N +
Sbjct: 105 YLLSGVGGNLLSFALGQDNV-----ISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQ 159
Query: 161 MLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
+L+I + FMP +D + HIGG + G LL IL
Sbjct: 160 AFLLLICNIVVDFFMPSVDIIGHIGGTITGFLLTIIL 196
>gi|159475074|ref|XP_001695648.1| rhomboid-like protease [Chlamydomonas reinhardtii]
gi|158275659|gb|EDP01435.1| rhomboid-like protease [Chlamydomonas reinhardtii]
Length = 584
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 83/150 (55%), Gaps = 12/150 (8%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
G+ +R+ + + LH + +HL++N+ +L + LE +G R+ ++ ++G G ++S
Sbjct: 357 GQWWRWLTGLLLHQSALHLVSNTALLLVLATYLESLYGCWRVLPVFFVAGIAGNMVSSWL 416
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAI---- 172
+D + VGASGA+FGLLGA ++ NW + + + LV+G +A+
Sbjct: 417 EDPC----TLVVGASGAVFGLLGAYTADAGLNWESIPLLWLRLAGMGLVVGFMLALQLAD 472
Query: 173 ----GFMPGIDNMAHIGGFVAGILLGFILL 198
G + + +H GGFVAG+L+ ++LL
Sbjct: 473 HSRSGSAGAVSHASHAGGFVAGLLMAWLLL 502
>gi|46907563|ref|YP_013952.1| rhomboid family protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|424714211|ref|YP_007014926.1| Rhomboid family protein [Listeria monocytogenes serotype 4b str.
LL195]
gi|46880831|gb|AAT04129.1| rhomboid family protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|424013395|emb|CCO63935.1| Rhomboid family protein [Listeria monocytogenes serotype 4b str.
LL195]
Length = 518
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++HL +N++ +
Sbjct: 206 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYI 258
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 259 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 312
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 313 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|325912656|ref|ZP_08175039.1| peptidase, S54 family [Lactobacillus iners UPII 60-B]
gi|325478077|gb|EGC81206.1| peptidase, S54 family [Lactobacillus iners UPII 60-B]
Length = 232
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 82/157 (52%), Gaps = 6/157 (3%)
Query: 42 LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
L G ++ VV + +R F+ ++HA H++ N + I F G+ LE+ G +R +
Sbjct: 45 LLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFLEQFLGHIRYLTI 104
Query: 102 YVLSGFGGGLLS-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT 160
Y+LSG GG LLS L QD IS GAS A+FGL+G+ L+ N +
Sbjct: 105 YLLSGVGGNLLSFALGQDNV-----ISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQ 159
Query: 161 MLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
+L+I + FMP +D + HIGG + G LL IL
Sbjct: 160 AFLLLICNIVVDFFMPSVDIIGHIGGTITGFLLTIIL 196
>gi|47093617|ref|ZP_00231374.1| rhomboid family protein [Listeria monocytogenes str. 4b H7858]
gi|254932348|ref|ZP_05265707.1| rhomboid family protein [Listeria monocytogenes HPB2262]
gi|258611754|ref|ZP_05241962.2| rhomboid family protein [Listeria monocytogenes FSL R2-503]
gi|300765423|ref|ZP_07075405.1| rhomboid family protein [Listeria monocytogenes FSL N1-017]
gi|424823099|ref|ZP_18248112.1| Rhomboid family protein [Listeria monocytogenes str. Scott A]
gi|47017993|gb|EAL08769.1| rhomboid family protein [Listeria monocytogenes str. 4b H7858]
gi|258605928|gb|EEW18536.1| rhomboid family protein [Listeria monocytogenes FSL R2-503]
gi|293583904|gb|EFF95936.1| rhomboid family protein [Listeria monocytogenes HPB2262]
gi|300513860|gb|EFK40925.1| rhomboid family protein [Listeria monocytogenes FSL N1-017]
gi|332311779|gb|EGJ24874.1| Rhomboid family protein [Listeria monocytogenes str. Scott A]
Length = 518
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++HL +N++ +
Sbjct: 206 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYI 258
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 259 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 312
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 313 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|404407774|ref|YP_006690489.1| rhomboid family protein [Listeria monocytogenes SLCC2376]
gi|404241923|emb|CBY63323.1| rhomboid family protein [Listeria monocytogenes SLCC2376]
Length = 512
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++HL +N++ +
Sbjct: 200 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYI 252
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 253 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 306
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 307 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|358012853|ref|ZP_09144663.1| hypothetical protein AP8-3_15163 [Acinetobacter sp. P8-3-8]
Length = 270
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/190 (34%), Positives = 92/190 (48%), Gaps = 20/190 (10%)
Query: 20 HLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNS 79
++G F+ Q S ++ PST + G L + E YR FS M+ H ++HL+ N
Sbjct: 28 NVGLFAVQVLSGVNITDPSTLDALRWGADYAPLTFLE-EPYRLFSSMFFHFGILHLMMNM 86
Query: 80 LAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS-CLHQDESQQTLQ---------ISVG 129
A+ G E+ FG LY+++G G LLS L S LQ +S G
Sbjct: 87 WALFVFGNVAEQTFGRAYYLGLYIIAGLMGSLLSGYLDIRNSYALLQSFDVKLLPHVSAG 146
Query: 130 ASGALFGLLGA----SLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP-GIDNMAHI 184
ASGA+ GL GA SL + N +K L+ ++ +N+A GF GI+N AHI
Sbjct: 147 ASGAVMGLGGALAMLSLFPPVPNQRFILDK----KSLLSILAINLAFGFFATGINNAAHI 202
Query: 185 GGFVAGILLG 194
GG V G +L
Sbjct: 203 GGMVMGAILA 212
>gi|386008108|ref|YP_005926386.1| rhomboid family protein [Listeria monocytogenes L99]
gi|307570918|emb|CAR84097.1| rhomboid family protein [Listeria monocytogenes L99]
Length = 512
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++HL +N++ +
Sbjct: 200 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYI 252
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 253 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 306
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 307 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|254824604|ref|ZP_05229605.1| rhomboid family protein [Listeria monocytogenes FSL J1-194]
gi|255520229|ref|ZP_05387466.1| rhomboid family protein [Listeria monocytogenes FSL J1-175]
gi|293593842|gb|EFG01603.1| rhomboid family protein [Listeria monocytogenes FSL J1-194]
Length = 518
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++HL +N++ +
Sbjct: 206 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYI 258
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 259 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 312
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 313 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|350645981|emb|CCD59258.1| RHBDF1 protein (S54 family) [Schistosoma mansoni]
Length = 349
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 7/137 (5%)
Query: 55 YDGEIYRFFSCMWLHANVIHL-LTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
Y ++YR F+ ++LHA V+HL LT + ++F+ LE+ G+ RI L+Y+LSG G L S
Sbjct: 219 YPNQMYRIFTSLFLHAGVLHLILTLGVQMIFMR-DLEKMIGWHRITLVYILSGCIGSLTS 277
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
+ Q+ G +GA F LLG SL ++I W + ++ IL++ + G
Sbjct: 278 GIFLP-----YQVETGPTGAQFALLGISLVDLIHCWQFLAHPWYALLRNILLVFILFTFG 332
Query: 174 FMPGIDNMAHIGGFVAG 190
+P IDN A+ G F++
Sbjct: 333 LLPWIDNYANAGSFLSA 349
>gi|152993649|ref|YP_001359370.1| hypothetical protein SUN_2072 [Sulfurovum sp. NBC37-1]
gi|151425510|dbj|BAF73013.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 192
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 7/165 (4%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
L +G L L V GE +R F+ M+LH + H+L N +++ IG +E F
Sbjct: 5 VLVDMGALYGPLTVLKGEWWRLFTAMFLHGGMTHILMNMVSLYIIGRGMEMYFDTKSYLS 64
Query: 101 LYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT-LYTNKCVSI 159
+Y+ SG GGL+S S + +GASGA+FG+ GA I + L + +
Sbjct: 65 IYLFSGLLGGLVSLYIHPAS-----VGIGASGAIFGVFGALAGFFIAHRKHLGKHTKAFM 119
Query: 160 TMLILVIGVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++I +N+ IGF +P +D AH+ G V G + G++L P++
Sbjct: 120 KEFTVIIVINLVIGFSIPNVDVSAHVAGTVVGFIGGYLLSKDPKF 164
>gi|402594299|gb|EJW88225.1| rhomboid family protein [Wuchereria bancrofti]
Length = 368
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 82/152 (53%), Gaps = 17/152 (11%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
E++R+F+ M++H +IHL N L + +G+ LE F RI L+Y+ G LL
Sbjct: 188 NEVWRYFTYMFIHIGIIHLAFNVLTQIVLGIPLELVHKFWRIALVYLSGVLAGSLL---- 243
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNW-----TLYTNKCVSITMLI-----LVI 166
D + GASG ++ LL A ++E++ NW LY + +++ +LI LVI
Sbjct: 244 -DYAIDPRTHLAGASGGVYALLAAHIAELLINWAEMEFALY--RALALVVLISSDVSLVI 300
Query: 167 GVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
+ + +++H+ GFVAG+L+G ++L
Sbjct: 301 YHRYYLNTADKVSHVSHLAGFVAGVLMGTVVL 332
>gi|357400681|ref|YP_004912606.1| hypothetical protein SCAT_3097 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386356736|ref|YP_006054982.1| hypothetical protein SCATT_30890 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337767090|emb|CCB75801.1| conserved membrane protein of unknown function [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365807244|gb|AEW95460.1| hypothetical protein SCATT_30890 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 282
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 9/149 (6%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +G+ YR + +LH NV+H+ N L++ +IG LE G +R +Y+LS GG LS
Sbjct: 112 VAEGQWYRLLTATFLHQNVMHIGFNMLSLWWIGPGLEVALGRVRFLAVYLLSALGGSALS 171
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L + + +L GASGA+FGLLGA+ ++ Y ++ + + I+V+ +
Sbjct: 172 FLLANPNAGSL----GASGAVFGLLGATF--VLMRRLRYDSRPI---VAIIVLNLFFTFA 222
Query: 174 FMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
ID AHIGG V G ++ F ++ P+
Sbjct: 223 QTGTIDWRAHIGGLVTGAVVAFGMVHAPR 251
>gi|411003693|ref|ZP_11380022.1| hypothetical protein SgloC_12861 [Streptomyces globisporus C-1027]
Length = 301
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 13/151 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +G+ YR + M+LH V+HL N L + ++G +LE G R LY+LSG G L+
Sbjct: 132 VAEGQWYRLVTSMFLHQEVVHLGFNMLGLWWLGGQLEAALGRSRYLALYLLSGLAGSALT 191
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L ++Q +L GASGA++GL GA + ++ Y + V ++++ VN+A
Sbjct: 192 YLLAAQNQPSL----GASGAVYGLFGA--TAVLMRRMNYDMRPV-----LILLAVNLAFT 240
Query: 174 F--MPGIDNMAHIGGFVAGILLGFILLLRPQ 202
F GI AH+GG +AG+ + ++ P+
Sbjct: 241 FFNRDGIAWQAHVGGLIAGVAIAIGMVHAPR 271
>gi|258650339|ref|YP_003199495.1| rhomboid family protein [Nakamurella multipartita DSM 44233]
gi|258553564|gb|ACV76506.1| Rhomboid family protein [Nakamurella multipartita DSM 44233]
Length = 292
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 85/150 (56%), Gaps = 12/150 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V GE +R + +LH N++HL TN L++ ++G+ LE G R+ +Y++S G +
Sbjct: 106 VASGEYWRLLTSGFLHGNLVHLATNMLSLYWLGIPLERILGRGRMLTIYLISLLGASVSV 165
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L + +++GASGA++GL+GA L+ + + + L++++ +N+ I
Sbjct: 166 LLFSAP----VSLTIGASGAVYGLMGALLAT-------FRRLRLDLRPLVVILALNVFIT 214
Query: 174 F-MPGIDNMAHIGGFVAGILLGFILLLRPQ 202
F PG+ H+GGFVAG ++G ++ P+
Sbjct: 215 FSYPGLSWQGHLGGFVAGAIVGAAMVFPPR 244
>gi|431906772|gb|ELK10893.1| Rhomboid family member 1 [Pteropus alecto]
Length = 867
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/176 (28%), Positives = 82/176 (46%), Gaps = 27/176 (15%)
Query: 58 EIYRFFSCMWLHAN-----------VIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG
Sbjct: 653 QFYRLWLSLFLHAGQVTPYGLSRAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSG 712
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
G L S + + VG +G+ FG+L E+ +W + + L+ V+
Sbjct: 713 VTGNLASAIFL-----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVV 767
Query: 167 GVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
G +P IDN AHI GFV+G+ L F L PYI+ G ++L K+
Sbjct: 768 LFLFTFGLLPWIDNFAHISGFVSGLFLSFAFL----------PYISFGRFDLYRKR 813
>gi|423216154|ref|ZP_17202679.1| hypothetical protein HMPREF1074_04211 [Bacteroides xylanisolvens
CL03T12C04]
gi|392691005|gb|EIY84256.1| hypothetical protein HMPREF1074_04211 [Bacteroides xylanisolvens
CL03T12C04]
Length = 584
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST +L K G L + G+ +R +C ++H HLL N A +++G+ LE
Sbjct: 177 IMSPSTLSLLKWGADFGPLTL-TGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEGLI 235
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G + S E+ IS GASGA+FGL G L+ + +
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGET-----ISAGASGAIFGLYGIFLAFLFFHRIAKE 290
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHI 184
+ +T +++ +G N+ G GIDN AHI
Sbjct: 291 QRKALLTSILIFVGYNLVYGMKAGIDNAAHI 321
>gi|16800442|ref|NP_470710.1| hypothetical protein lin1374 [Listeria innocua Clip11262]
gi|422415832|ref|ZP_16492789.1| rhomboid family protein [Listeria innocua FSL J1-023]
gi|16413847|emb|CAC96605.1| lin1374 [Listeria innocua Clip11262]
gi|313623901|gb|EFR94013.1| rhomboid family protein [Listeria innocua FSL J1-023]
Length = 512
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 36 GPSTAT--LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
G ST T L K GG N ++Y GE +RF S ++LH+ +IHL +N++ + +G E +
Sbjct: 203 GGSTDTFNLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLIHLASNAVMLYIVGAWAERIY 261
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R L+ +L G G + S + +SVGAS A+F ++GA L ++ LY
Sbjct: 262 GKWRYILILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYLVVLKPNLYA 315
Query: 154 NKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
K + ++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 316 -KTIGTSIASLV-AINLLIDVFSTQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|86159216|ref|YP_466001.1| rhomboid-like protein [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775727|gb|ABC82564.1| Rhomboid-like protein [Anaeromyxobacter dehalogenans 2CP-C]
Length = 360
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 19/166 (11%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL----EEDF 93
A L ++G L + V+DGE +R + +LH +HL+ N L GV L E
Sbjct: 44 DPALLARMGALD-HARVWDGEPWRLLTAAFLHVGPVHLVWN----LAFGVPLCALVERAI 98
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLS---EIITNWT 150
G R ++Y+ S GG S L + +S GASGALFG+ GA L+ + +W
Sbjct: 99 GTRRFLVVYLASALGGSAASML------AAMPMSAGASGALFGVAGAMLALYRRAVGSWR 152
Query: 151 LYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+ + I I+++ +A F+P ID AH GG V G LG++
Sbjct: 153 AFLSSRDIILNGIMLVAFALAGLFLP-IDGWAHAGGLVTGAWLGWV 197
>gi|403222163|dbj|BAM40295.1| uncharacterized protein TOT_020000554 [Theileria orientalis strain
Shintoku]
Length = 691
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 29 RSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVK 88
S S P+ G L N + E +R F M +H ++H+L N LA I
Sbjct: 369 ESTASFDAPNNRVFNLFGSLDANYIRNYNETFRLFWSMVMHKGLVHVLFNLLAQSQILWI 428
Query: 89 LEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITN 148
+E D+GF R + LSG G L + + + + + +G+SG LFGL+ + + I N
Sbjct: 429 IEPDWGFCRTASTFFLSGLVGNLAAAVF----EPSFNV-LGSSGCLFGLIASLIPYCIEN 483
Query: 149 WTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILL 198
WTL + + I L I + + F + AH GG+V G L GF L
Sbjct: 484 WTLLASP-IYIFFFTLCITIISLLAFNDTVSVYAHFGGWVGGFLWGFATL 532
>gi|401395890|ref|XP_003879705.1| putative rhomboid-like protease 5 [Neospora caninum Liverpool]
gi|325114112|emb|CBZ49670.1| putative rhomboid-like protease 5 [Neospora caninum Liverpool]
Length = 937
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 50/152 (32%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
P+ GGL N + GE++R F M LH +HL N L LE +GF
Sbjct: 472 PNPRIFGAAGGLDTNKIRNYGEVFRVFWAMNLHGGRLHLANNIACQLHAFWILEPCWGFF 531
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK- 155
R LL+++ G G L S + +++G+SGA FG+LGA + I W T+
Sbjct: 532 RTLLLWLVGGVTGNLFSAV-----VDPCTVTIGSSGAFFGMLGALIPFSIEYWDHITSPA 586
Query: 156 ----CVSITMLILVIGVNMAIGFMPGIDNMAH 183
CV+I + + +G + +G GIDN AH
Sbjct: 587 WFLFCVAILVTVAQLGSMIGLG---GIDNNAH 615
>gi|423100417|ref|ZP_17088124.1| peptidase, S54 family [Listeria innocua ATCC 33091]
gi|370793418|gb|EHN61256.1| peptidase, S54 family [Listeria innocua ATCC 33091]
Length = 518
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 90/171 (52%), Gaps = 12/171 (7%)
Query: 36 GPSTAT--LKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
G ST T L K GG N ++Y GE +RF S ++LH+ +IHL +N++ + +G E +
Sbjct: 209 GGSTDTFNLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLIHLASNAVMLYIVGAWAERIY 267
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R L+ +L G G + S + +SVGAS A+F ++GA L ++ LY
Sbjct: 268 GKWRYILILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYLVVLKPNLYA 321
Query: 154 NKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
K + ++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 322 -KTIGTSIASLV-AINLLIDVFSTQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|422412807|ref|ZP_16489766.1| rhomboid family protein, partial [Listeria innocua FSL S4-378]
gi|313619110|gb|EFR90907.1| rhomboid family protein [Listeria innocua FSL S4-378]
Length = 472
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 87/167 (52%), Gaps = 10/167 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
T L K GG N ++Y GE +RF S ++LH+ +IHL +N++ + +G E +G R
Sbjct: 207 DTFNLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWR 265
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
L+ +L G G + S + +SVGAS A+F ++GA L ++ LY K +
Sbjct: 266 YILILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYLVVLKPNLYA-KTI 318
Query: 158 SITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 319 GTSIASLV-AINLLIDVFSTQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|302669450|ref|YP_003829410.1| peptidase [Butyrivibrio proteoclasticus B316]
gi|302393923|gb|ADL32828.1| membrane-associated peptidase rhomboid family [Butyrivibrio
proteoclasticus B316]
Length = 216
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 92/158 (58%), Gaps = 5/158 (3%)
Query: 33 SLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEED 92
S+F P T+ G + V+ DGE +R + M+LH ++ HL N + +L +G +E
Sbjct: 41 SMFFPFIYTI---GVMYTPSVLQDGEYHRLVTAMFLHQDINHLFNNMMILLLVGAIIENY 97
Query: 93 FGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW-TL 151
G + G++Y+ +G G LLS ++ ++ T +S+GASGA+ G++G + ++ N +L
Sbjct: 98 LGHVAYGIMYMAAGIFGNLLSMAYEVRNEVTW-VSLGASGAVMGIVGFLVVWLVINRKSL 156
Query: 152 YTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVA 189
+K + + +L L++ V A F G + +AH+GGF+A
Sbjct: 157 AQDKSMLVRLLFLLLFVVEACFFQQGANTIAHLGGFIA 194
>gi|70946992|ref|XP_743154.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56522517|emb|CAH75506.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 220
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 92/190 (48%), Gaps = 17/190 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
+ GEI+R ++LHAN+ H N L +G LE+++G L++ +LY L+G G +LS
Sbjct: 39 IKSGEIHRLILPIFLHANIFHAFFNVFFQLRMGFTLEKNYGILKVAILYFLTGIYGNILS 98
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
S VGAS + GLLG SE+I W + ++ + ++ +++
Sbjct: 99 -----SSVTYCTTKVGASTSGMGLLGIVTSELILLWHIIRHRERVVFNILFFTSISILYY 153
Query: 174 FM---PGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKL 230
F ID++ H+GG ++GI +G + Y P + N + Y C L
Sbjct: 154 FTFNGSNIDHVGHLGGLLSGISIGML--------YNEKMENKPTWYNNARIASYVC-LAL 204
Query: 231 LWVISVVVLF 240
L +I VVLF
Sbjct: 205 LAIIPTVVLF 214
>gi|320108412|ref|YP_004184002.1| rhomboid family protein [Terriglobus saanensis SP1PR4]
gi|319926933|gb|ADV84008.1| Rhomboid family protein [Terriglobus saanensis SP1PR4]
Length = 280
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 93/194 (47%), Gaps = 30/194 (15%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
PS A L + G + +LV+ G+ +R S M++H +IHL TN + +G+ E GF
Sbjct: 68 PSLADLIRFGANNSDLVIVHGQWWRIISAMFVHVGLIHLATNMWCLWNLGLLGEPLLGFF 127
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
+ +Y+LSG G LLS +Q Q+ GASGA+FG+ G + L +NK
Sbjct: 128 GMISVYLLSGAAGNLLSIAWDVIWKQHGQVGAGASGAVFGIAGILI-------VLLSNKR 180
Query: 157 VSITM-----------------LILVIGVNMAIGFMP------GIDNMAHIGGFVAGILL 193
+S + +I G+N+AIG IDN AHIGGFV G+ +
Sbjct: 181 LSESRGGRPGIPWMELRALRKSVIQFAGLNLAIGLASIFFDVVRIDNSAHIGGFVCGLAM 240
Query: 194 GFILLLRPQYGYVS 207
G LL G V
Sbjct: 241 GVPLLPEMTSGRVK 254
>gi|296005098|ref|XP_002808884.1| rhomboid protease ROM3, putative [Plasmodium falciparum 3D7]
gi|225632283|emb|CAX64162.1| rhomboid protease ROM3, putative [Plasmodium falciparum 3D7]
Length = 267
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 88/166 (53%), Gaps = 9/166 (5%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
SEN L P+ L LG + ++ +G+ +R ++LHAN+ HL+ N L IL +G+ +
Sbjct: 62 SEN-LSTPNVHILILLGA-TYGPLIKEGQYWRLVLPIFLHANLWHLIINILCILNLGLII 119
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
E + + L+Y LSG G +L+ + Q++VGAS + FGL+G S+ EI W
Sbjct: 120 ESKYKKSKFLLIYFLSGATGNILTTI-----CNPCQLAVGASTSGFGLIGCSIFEIFLAW 174
Query: 150 TLYTNKCVS--ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
T K + I + L + M + F P +D HIGGF+ G L
Sbjct: 175 KNLTRKAKNYYILNIFLFLLFFMFVSFSPSVDLFGHIGGFLCGAFL 220
>gi|384245835|gb|EIE19327.1| rhomboid-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 433
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
+ YR+F+ +LH + H+L+N L L I ++EE +G RI ++++ + GG S
Sbjct: 244 AQPYRWFTSWFLHQSFTHVLSNMLLFLVIACQMEEKYGSGRILIVWLFAAVGGNFFSAAF 303
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLI--LVIGVNMAIGF 174
+D T VGASG +FG++G ++++I N++ + M+I L+ + +
Sbjct: 304 ED----TCLALVGASGGVFGMVGLFIADMIVNFSTIKRPIIRSVMMIAFLIYFIVTVVTS 359
Query: 175 MPGIDNMAHIGGFVAGILLGFILL 198
G +++H+GGF++G+ + L
Sbjct: 360 PVGTSHLSHVGGFLSGLFPALLFL 383
>gi|262409313|ref|ZP_06085856.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294644959|ref|ZP_06722693.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CC
2a]
gi|294805963|ref|ZP_06764830.1| peptidase, S54 (rhomboid) family protein [Bacteroides xylanisolvens
SD CC 1b]
gi|345509393|ref|ZP_08788992.1| hypothetical protein BSAG_03733 [Bacteroides sp. D1]
gi|229446228|gb|EEO52019.1| hypothetical protein BSAG_03733 [Bacteroides sp. D1]
gi|262352765|gb|EEZ01862.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639680|gb|EFF57964.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CC
2a]
gi|294446845|gb|EFG15445.1| peptidase, S54 (rhomboid) family protein [Bacteroides xylanisolvens
SD CC 1b]
Length = 584
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST +L K G L + G+ +R +C ++H HLL N A +++G+ LE
Sbjct: 177 IMSPSTLSLLKWGADFGPLTL-TGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEGLI 235
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G + S E+ IS GASGA+FGL G L+ + +
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGET-----ISAGASGAIFGLYGIFLAFLFFHRIAKE 290
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHI 184
+ +T +++ +G N+ G GIDN AHI
Sbjct: 291 QRKALLTSILIFVGYNLVYGMKAGIDNAAHI 321
>gi|16803377|ref|NP_464862.1| hypothetical protein lmo1337 [Listeria monocytogenes EGD-e]
gi|284801722|ref|YP_003413587.1| hypothetical protein LM5578_1476 [Listeria monocytogenes 08-5578]
gi|284994864|ref|YP_003416632.1| hypothetical protein LM5923_1429 [Listeria monocytogenes 08-5923]
gi|404283828|ref|YP_006684725.1| rhomboid family protein [Listeria monocytogenes SLCC2372]
gi|404410635|ref|YP_006696223.1| rhomboid family protein [Listeria monocytogenes SLCC5850]
gi|405758384|ref|YP_006687660.1| rhomboid family protein [Listeria monocytogenes SLCC2479]
gi|16410753|emb|CAC99415.1| lmo1337 [Listeria monocytogenes EGD-e]
gi|284057284|gb|ADB68225.1| hypothetical protein LM5578_1476 [Listeria monocytogenes 08-5578]
gi|284060331|gb|ADB71270.1| hypothetical protein LM5923_1429 [Listeria monocytogenes 08-5923]
gi|404230461|emb|CBY51865.1| rhomboid family protein [Listeria monocytogenes SLCC5850]
gi|404233330|emb|CBY54733.1| rhomboid family protein [Listeria monocytogenes SLCC2372]
gi|404236266|emb|CBY57668.1| rhomboid family protein [Listeria monocytogenes SLCC2479]
gi|441471011|emb|CCQ20766.1| Rhomboid protease gluP [Listeria monocytogenes]
gi|441474138|emb|CCQ23892.1| Rhomboid protease gluP [Listeria monocytogenes N53-1]
Length = 512
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++H+ +N++ +
Sbjct: 200 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHIASNAVMLYI 252
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 253 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 306
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 307 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|47095921|ref|ZP_00233524.1| rhomboid family protein [Listeria monocytogenes str. 1/2a F6854]
gi|254912011|ref|ZP_05262023.1| rhomboid family protein [Listeria monocytogenes J2818]
gi|254936338|ref|ZP_05268035.1| rhomboid family protein [Listeria monocytogenes F6900]
gi|258611432|ref|ZP_05232285.2| rhomboid family protein [Listeria monocytogenes FSL N3-165]
gi|386043648|ref|YP_005962453.1| rhomboid family protein [Listeria monocytogenes 10403S]
gi|386046989|ref|YP_005965321.1| rhomboid family protein [Listeria monocytogenes J0161]
gi|386050313|ref|YP_005968304.1| rhomboid family protein [Listeria monocytogenes FSL R2-561]
gi|386053590|ref|YP_005971148.1| rhomboid family protein [Listeria monocytogenes Finland 1998]
gi|47015667|gb|EAL06597.1| rhomboid family protein [Listeria monocytogenes str. 1/2a F6854]
gi|258599975|gb|EEW13300.1| rhomboid family protein [Listeria monocytogenes FSL N3-165]
gi|258608928|gb|EEW21536.1| rhomboid family protein [Listeria monocytogenes F6900]
gi|293589976|gb|EFF98310.1| rhomboid family protein [Listeria monocytogenes J2818]
gi|345533980|gb|AEO03421.1| rhomboid family protein [Listeria monocytogenes J0161]
gi|345536882|gb|AEO06322.1| rhomboid family protein [Listeria monocytogenes 10403S]
gi|346424159|gb|AEO25684.1| rhomboid family protein [Listeria monocytogenes FSL R2-561]
gi|346646241|gb|AEO38866.1| rhomboid family protein [Listeria monocytogenes Finland 1998]
Length = 518
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++H+ +N++ +
Sbjct: 206 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHIASNAVMLYI 258
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 259 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 312
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 313 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|430805416|ref|ZP_19432531.1| intramembrane serine protease [Cupriavidus sp. HMR-1]
gi|429502334|gb|ELA00646.1| intramembrane serine protease [Cupriavidus sp. HMR-1]
Length = 533
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 83/156 (53%), Gaps = 17/156 (10%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
+ DG+ +R + +LH ++ HL N + + +G +E FG L+YV +G G L
Sbjct: 214 LTQDGQWWRLLTATFLHGSLKHLAANMVVLYLLGKHVERFFGTRSFLLIYVGAGLLGSAL 273
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASL-------SEIITNWTLYTNKCVSITMLILV 165
S ++ +SVGASGA+FG+ GA L E+ N N+ VS +++
Sbjct: 274 SLYFAAQT----SVSVGASGAVFGIGGALLVAALLHRRELPQN---IRNRLVSDA--VIM 324
Query: 166 IGVNMAIGFMPG-IDNMAHIGGFVAGILLGFILLLR 200
IG ++A GF+ +DN AH+GG + G+LL L +R
Sbjct: 325 IGYSLAQGFLSTRVDNAAHVGGLIGGVLLALCLPVR 360
>gi|404413413|ref|YP_006699000.1| rhomboid family protein [Listeria monocytogenes SLCC7179]
gi|404239112|emb|CBY60513.1| rhomboid family protein [Listeria monocytogenes SLCC7179]
Length = 512
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SFQ + NS L K GG N ++Y GE +RF S ++LH+ ++H+ +N++ +
Sbjct: 200 SFQGGTTNSF------NLIKWGG-KFNPLIYAGEWWRFISPIFLHSGLMHIASNAVMLYI 252
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G E +G R L+ +L G G + S + +SVGAS A+F ++GA L
Sbjct: 253 VGAWAERIYGKWRYVLILLLGGICGNIASF------ALNMNLSVGASTAVFAVMGALLYL 306
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
++ LY K + +++ LV +N+ I F ID HIGG V G LL L L Q+
Sbjct: 307 VVLKPNLYA-KTIGVSIASLV-AINLLIDVFSSQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|392553138|ref|ZP_10300275.1| rhomboid-like protein [Pseudoalteromonas spongiae UST010723-006]
Length = 360
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 78/147 (53%), Gaps = 10/147 (6%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
EI+ +C++LH +V+HL+ N + IG LE+ G + + Y++ G G L S +
Sbjct: 194 EIWTLLTCVFLHGSVMHLVGNMYFLYIIGDNLEDALGHKKYLMYYLICGIGASLFSLVM- 252
Query: 118 DESQQTLQISVGASGALFGLLGASL-----SEIITNWTLYTNKCVSITMLILVIGVNM-- 170
SQ SVGASGA+ GL G L + + + +Y K ++ + I +N+
Sbjct: 253 --SQDPNIPSVGASGAIAGLFGMYLMWFRHASLTFMFVIYQKKLSAVWFFAIWIAINIFG 310
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFIL 197
I G+D AHIGGFV G+++G+ L
Sbjct: 311 LIVLQDGVDYGAHIGGFVVGLVIGYFL 337
>gi|334135017|ref|ZP_08508518.1| peptidase, S54 family [Paenibacillus sp. HGF7]
gi|333607519|gb|EGL18832.1| peptidase, S54 family [Paenibacillus sp. HGF7]
Length = 204
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 8/157 (5%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
ST TL + G L + + E +RFF+ M+LH + HLL NS A++ LE G +R
Sbjct: 41 STRTLIEYGALF-SAPGFVPEWWRFFTAMFLHIGLSHLLFNSFALVIFAPPLERLLGSVR 99
Query: 98 IGLLYVLSGFGGGLLSC-LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
+ Y+ SG G S LH D ++ GASGA++G+ A L + L +
Sbjct: 100 YAVFYLASGALGSAFSYWLHTDA-----YVAAGASGAIYGIYAAYLYLALFRRQLLDQQS 154
Query: 157 VSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
++ILV G+ ++ +P +D H+GGF+AG +L
Sbjct: 155 RQTVIIILVSGLLFSV-IVPNVDLYTHLGGFLAGFIL 190
>gi|309808584|ref|ZP_07702478.1| peptidase, S54 family [Lactobacillus iners LactinV 01V1-a]
gi|308168180|gb|EFO70304.1| peptidase, S54 family [Lactobacillus iners LactinV 01V1-a]
Length = 182
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 78/146 (53%), Gaps = 6/146 (4%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
VV + +R F+ ++HA H++ N + I F G+ LE+ G +R +Y+LSG GG LL
Sbjct: 6 VVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIRYLTIYLLSGVGGNLL 65
Query: 113 S-CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMA 171
S L QD IS GAS A+FGL+G+ L+ N + +L+I +
Sbjct: 66 SFALGQDNV-----ISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQAFLLLICNIVV 120
Query: 172 IGFMPGIDNMAHIGGFVAGILLGFIL 197
FMP +D + HIGG + G LL IL
Sbjct: 121 DFFMPSVDIIGHIGGTITGFLLTIIL 146
>gi|262368785|ref|ZP_06062114.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
gi|381197595|ref|ZP_09904935.1| hypothetical protein AlwoW_10058 [Acinetobacter lwoffii WJ10621]
gi|262316463|gb|EEY97501.1| conserved hypothetical protein [Acinetobacter johnsonii SH046]
Length = 271
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 94/189 (49%), Gaps = 16/189 (8%)
Query: 20 HLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNS 79
++G F +Q + PSTA + G L + E R S M+ H ++HL+ N
Sbjct: 28 NVGLFFWQVLHGMDVSNPSTADAIRWGADYAPLT-FLAEPMRLLSSMFFHFGLVHLMLNM 86
Query: 80 LAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTL------------QIS 127
A+ G LE+ FG + LYVL+G G LLS + L ++
Sbjct: 87 WALYIFGSVLEQMFGRVYFLALYVLAGLMGSLLSGYIAIQDSYELIRVGLANPELLPRVG 146
Query: 128 VGASGALFGLLGASLSEIITNWTLYTNKCV-SITMLILVIGVNMAIGFM-PGIDNMAHIG 185
GASGA+ G LGA+L+ + L + + L++V+G+N+A+GFM GI+N AHIG
Sbjct: 147 AGASGAVMG-LGAALTVLSLLPMLPQQRFILDKKTLLIVMGINLAMGFMISGINNAAHIG 205
Query: 186 GFVAGILLG 194
G + G +L
Sbjct: 206 GMLMGAVLA 214
>gi|373859824|ref|ZP_09602547.1| Rhomboid family protein [Bacillus sp. 1NLA3E]
gi|372450467|gb|EHP23955.1| Rhomboid family protein [Bacillus sp. 1NLA3E]
Length = 244
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 84/161 (52%), Gaps = 7/161 (4%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
PS + L G+ NL + +GE +RF + ++LH+ H+L NS +++ G LE+ G
Sbjct: 38 PSRLIFETLAGV--NLYIAEGEYWRFITPIFLHSGFAHMLFNSFSLVLFGPALEKMLGKT 95
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
+ LLY+ GG L+ + VG+SGA+F L G L+ I+ L + +
Sbjct: 96 KFTLLYL----AGGTLANVATYLVNPLSYSHVGSSGAIFALFGFYLAIILFKKHLLSRQN 151
Query: 157 VSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
I + I VIG+ M P ++ AH+ G ++G L+G I+
Sbjct: 152 SQIVLTITVIGLVMTF-IQPNVNVAAHVFGLISGFLIGSIV 191
>gi|345851676|ref|ZP_08804644.1| hypothetical protein SZN_17977 [Streptomyces zinciresistens K42]
gi|345636882|gb|EGX58421.1| hypothetical protein SZN_17977 [Streptomyces zinciresistens K42]
Length = 295
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 75/151 (49%), Gaps = 13/151 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +GE +R + M+ H V H N L++ ++G LE G R LY SG G +
Sbjct: 126 VAEGEWWRLVTSMFTHEAVWHFAFNMLSLWWLGGPLEAALGRARYLALYFCSGLAGSAFT 185
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L D +L GASGA+FGL GA+ L + +I ++ +N+
Sbjct: 186 YLLADPHTASL----GASGAIFGLFGATA-------VLLRRLQYDMRPIIALLVINLIFT 234
Query: 174 FMPG--IDNMAHIGGFVAGILLGFILLLRPQ 202
F PG I AHIGG VAG+++G+ ++ P+
Sbjct: 235 FAPGFNISWQAHIGGLVAGVIIGYAMVHAPR 265
>gi|422015063|ref|ZP_16361669.1| hypothetical protein OOA_09928 [Providencia burhodogranariea DSM
19968]
gi|414100115|gb|EKT61738.1| hypothetical protein OOA_09928 [Providencia burhodogranariea DSM
19968]
Length = 291
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/169 (31%), Positives = 84/169 (49%), Gaps = 23/169 (13%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC-- 114
G+ +R+ M LH+N +HL N LA+ IG++ E +G R+ +Y++SG G L S
Sbjct: 67 GDWWRYPISMVLHSNSVHLGFNCLALFVIGIECERAYGKFRLLAIYIISGIGAALFSAYW 126
Query: 115 --------------LHQDESQQTLQISVGASGALFGLLGAS---LSEIITNWT----LYT 153
+ Q +S + I VGASGA+ GL AS L + I + T +
Sbjct: 127 QYYETLNAANSSNNVWQMDSTIYITIGVGASGAIMGLAAASVIYLLKAINSPTILPAIRE 186
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ + +I +I + + G G+DN AHIGG + G L+ +L P+
Sbjct: 187 KQKRQLYNIIAMIALTLINGLQSGVDNAAHIGGAIIGALVSIGYVLMPE 235
>gi|329929395|ref|ZP_08283143.1| peptidase, S54 family [Paenibacillus sp. HGF5]
gi|328936482|gb|EGG32927.1| peptidase, S54 family [Paenibacillus sp. HGF5]
Length = 204
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 10/169 (5%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SF S N + TL K G LS +L + + +R+F+ M+LH HLL NS A+L
Sbjct: 34 SFDGGSRNPM------TLLKYGALS-DLPQFVDQAWRYFTAMFLHNGFDHLLFNSFALLV 86
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
LE G + +LY+LSG G ++ + E + VGASGA++G GA L
Sbjct: 87 FVPPLERIMGSWKFAILYLLSGVLGNVIGLAYY-ERMEDYTFLVGASGAIYGAYGAYLYI 145
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
+ + +L++G+ F PG+ +AH+GG V G L
Sbjct: 146 ALFQRHVIDESSRKTLFTLLILGI--LFSFTPGVSLVAHVGGLVGGFFL 192
>gi|357412396|ref|YP_004924132.1| rhomboid family protein [Streptomyces flavogriseus ATCC 33331]
gi|320009765|gb|ADW04615.1| Rhomboid family protein [Streptomyces flavogriseus ATCC 33331]
Length = 300
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 77/151 (50%), Gaps = 13/151 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +G+ YR + +LH V H+ N L + ++G LE G R LY+LSG G L+
Sbjct: 131 VAEGQWYRLVTSTFLHQEVWHIAFNMLGLWWLGGPLESALGRARYLALYLLSGLAGSALT 190
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L D +Q TL GASG++FGLLGA+ L + +I ++ VN+
Sbjct: 191 YLIADPAQGTL----GASGSVFGLLGATA-------VLMRRMNYDMRPVIALLVVNLIFT 239
Query: 174 FMP--GIDNMAHIGGFVAGILLGFILLLRPQ 202
F P GI AH+ G +AG L+ ++ P+
Sbjct: 240 FNPWGGIAWQAHVEGLIAGALIAVAMVHPPR 270
>gi|182418411|ref|ZP_02949705.1| rhomboid family protein [Clostridium butyricum 5521]
gi|237666444|ref|ZP_04526429.1| rhomboid family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377793|gb|EDT75337.1| rhomboid family protein [Clostridium butyricum 5521]
gi|237657643|gb|EEP55198.1| rhomboid family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 354
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 14/135 (10%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
++YDGEI+R SC +LH + +H+ N + IG ++E +G ++ +Y++S L
Sbjct: 206 LIYDGEIWRLISCAFLHGSFLHIACNMYMLYIIGPQIERIYGKVKYIFIYLISCITSSTL 265
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVS---ITMLILVIGVN 169
S + +S ISVGASG +FGL+GA L+ + L K + LI IG+N
Sbjct: 266 SLIINPDS-----ISVGASGGIFGLMGALLA-----FALIERKNIDREYTVGLIKTIGIN 315
Query: 170 MAIGF-MPGIDNMAH 183
+ IG + IDN AH
Sbjct: 316 LVIGLIIINIDNAAH 330
>gi|402594966|gb|EJW88892.1| hypothetical protein WUBG_00197 [Wuchereria bancrofti]
Length = 983
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 60 YRFFSCMWLHANVIH-LLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
YR F ++LHA +IH +LT + IL++ LE+ G+ R+ LLY++SG GG L +
Sbjct: 778 YRLFIPLFLHAGIIHCILTVFIQILYMR-DLEKLLGWARVALLYMVSGIGGYLAGAIFV- 835
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
+ VG +G+ G+ A +++ +W L ++ L L AIG +P +
Sbjct: 836 ----PYRPEVGPAGSHVGMFAAMYVDVLYSWNLLERPWHAVVQLSLFTLALFAIGTLPWV 891
Query: 179 DNMAHIGGFVAGILLGFILL 198
DN AH+ GF+ GIL+ +L
Sbjct: 892 DNWAHLFGFIFGILISLAVL 911
>gi|154420777|ref|XP_001583403.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121917644|gb|EAY22417.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 473
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 87/160 (54%), Gaps = 12/160 (7%)
Query: 31 ENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGV--K 88
EN +GPS L ++G L + YDGE +R + L V L ++ I+++G+ +
Sbjct: 225 ENLYYGPSAKLLMRVGALYPPWI-YDGEWWRLLVAISLQPGVAIL---AIDIVYMGLLYE 280
Query: 89 LEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITN 148
+E GF L+++L G G +LS ES + GA+GA+ G LG SL+ +I +
Sbjct: 281 IERYNGFWSALLIFLLCGLYGNVLSSYIISES-----VICGATGAICGWLGFSLTRLIAS 335
Query: 149 WTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFV 188
+ + C IT + ++I + A+G +P +DN H+GGFV
Sbjct: 336 FHIKKRVCYLITEIFMIIFIG-AVGILPYVDNFQHVGGFV 374
>gi|421465554|ref|ZP_15914241.1| peptidase, S54 family [Acinetobacter radioresistens WC-A-157]
gi|421854845|ref|ZP_16287230.1| hypothetical protein ACRAD_02_02040 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
gi|400203821|gb|EJO34806.1| peptidase, S54 family [Acinetobacter radioresistens WC-A-157]
gi|403189860|dbj|GAB73431.1| hypothetical protein ACRAD_02_02040 [Acinetobacter radioresistens
DSM 6976 = NBRC 102413]
Length = 268
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 84/156 (53%), Gaps = 13/156 (8%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
+ Y E R F+ M+ H +IHL+ N A+ G E+ FG LYVL+G G LL
Sbjct: 58 LTYLEEPQRLFTSMFFHFGLIHLMLNMWALYIFGSVAEQLFGRSYFIGLYVLAGLMGSLL 117
Query: 113 ----------SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV-SITM 161
S L+Q E + ++ GASGA+ G LGA+L+ + L + +
Sbjct: 118 SGYIDVQNTYSLLNQFEPELLPRVGAGASGAVMG-LGAALAILSLLPVLPRQQFILDRKS 176
Query: 162 LILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFI 196
L+LV+G+N+ +GFM GI+N AHIGG + GILL +
Sbjct: 177 LLLVMGLNLGMGFMISGINNAAHIGGMLMGILLALL 212
>gi|21222264|ref|NP_628043.1| hypothetical protein SCO3855 [Streptomyces coelicolor A3(2)]
gi|289770532|ref|ZP_06529910.1| conserved hypothetical protein [Streptomyces lividans TK24]
gi|5102807|emb|CAB45222.1| putative membrane protein [Streptomyces coelicolor A3(2)]
gi|289700731|gb|EFD68160.1| conserved hypothetical protein [Streptomyces lividans TK24]
Length = 297
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 12/150 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +GE YR + M+ H + H+ N +++ F+G LE G R LY++SG G +L+
Sbjct: 129 VAEGEWYRLVTTMFTHEEIWHIGFNMISLWFLGGPLEAALGRARYLALYLVSGLAGSVLA 188
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L + TL GASGA+FGL GA+ + L + +++++ +++
Sbjct: 189 YLLASPTTATL----GASGAIFGLFGATAA-------LVRRLNADMRPVVILLVISLIFT 237
Query: 174 FMPG-IDNMAHIGGFVAGILLGFILLLRPQ 202
F G I AH+GG VAG ++G+ +L P+
Sbjct: 238 FTRGNISWQAHVGGLVAGAVIGYAMLHAPR 267
>gi|126651489|ref|ZP_01723693.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
gi|126591742|gb|EAZ85838.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
Length = 207
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 90/165 (54%), Gaps = 12/165 (7%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
P TL G+ N +V GE +R FS ++LHA +H+ N ++ G +LE+ G
Sbjct: 35 PGVGTLLWNYGIQANFLVQKGEWWRVFSAIFLHAGFMHVFFNMFSLYLFGPELEKIAGKA 94
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
R +Y++SG G + + + D S +L GASGA+FG+ GA + + YT +
Sbjct: 95 RFITIYLVSGIVGNMATYIFYDSSYASL----GASGAIFGIFGAFGALV-----YYTRRT 145
Query: 157 VSI--TMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILL 198
+ + +++ +I +++ + F+ P ++ AH+GG V G +LG I L
Sbjct: 146 MPMLRKLILPIIIISVIMTFLQPNVNVFAHLGGLVTGFILGLIYL 190
>gi|262375829|ref|ZP_06069061.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
gi|262309432|gb|EEY90563.1| conserved hypothetical protein [Acinetobacter lwoffii SH145]
Length = 272
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 97/188 (51%), Gaps = 16/188 (8%)
Query: 20 HLGRFSFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNS 79
++G F +Q + + PST L G + Y E R FS M+ H +IHL+ N
Sbjct: 28 NVGLFGWQAINGMDVSQPSTRD-AILWGADYAPLTYLAEPMRLFSSMFFHFGLIHLMLNM 86
Query: 80 LAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS-CLHQDESQQTLQ-----------IS 127
A+ G E+ FG + LY+ +G G LLS ++ +S + ++ +S
Sbjct: 87 WALYIFGSVAEQLFGRMYFIGLYMCAGLMGSLLSGYMNIQDSYRLIEGGVANPDLLPAVS 146
Query: 128 VGASGALFGLLGASLSEIITNWTLYTNKCV-SITMLILVIGVNMAIGFM-PGIDNMAHIG 185
GASGA+ G LGASL+ + L + + L++V+G+N+A+GFM GI+N AHIG
Sbjct: 147 AGASGAVMG-LGASLTVLALLPMLPQQRFILDKKTLVMVMGLNLALGFMISGINNAAHIG 205
Query: 186 GFVAGILL 193
G + G L
Sbjct: 206 GMLMGAFL 213
>gi|15839491|ref|NP_334528.1| rhomboid family protein [Mycobacterium tuberculosis CDC1551]
gi|148821302|ref|YP_001286056.1| integral membrane protein [Mycobacterium tuberculosis F11]
gi|253797028|ref|YP_003030029.1| hypothetical protein TBMG_00111 [Mycobacterium tuberculosis KZN
1435]
gi|254233504|ref|ZP_04926830.1| hypothetical protein TBCG_00110 [Mycobacterium tuberculosis C]
gi|289445640|ref|ZP_06435384.1| rhomboid family protein [Mycobacterium tuberculosis CPHL_A]
gi|289747877|ref|ZP_06507255.1| rhomboid family protein [Mycobacterium tuberculosis 02_1987]
gi|308378549|ref|ZP_07482957.2| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|308394636|ref|ZP_07491694.2| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|375294312|ref|YP_005098579.1| hypothetical protein TBSG_00111 [Mycobacterium tuberculosis KZN
4207]
gi|392430521|ref|YP_006471565.1| hypothetical protein TBXG_000111 [Mycobacterium tuberculosis KZN
605]
gi|422815296|ref|ZP_16863514.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|13879598|gb|AAK44342.1| Rhomboid family protein [Mycobacterium tuberculosis CDC1551]
gi|124603297|gb|EAY61572.1| hypothetical protein TBCG_00110 [Mycobacterium tuberculosis C]
gi|148719829|gb|ABR04454.1| conserved integral membrane protein [Mycobacterium tuberculosis
F11]
gi|253318531|gb|ACT23134.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
gi|289418598|gb|EFD15799.1| rhomboid family protein [Mycobacterium tuberculosis CPHL_A]
gi|289688405|gb|EFD55893.1| rhomboid family protein [Mycobacterium tuberculosis 02_1987]
gi|308197784|gb|ADO17908.1| rhomboid protease 1 [Mycobacterium tuberculosis H37Rv]
gi|308197788|gb|ADO17910.1| rhomboid protease 1 [Mycobacterium tuberculosis]
gi|308197792|gb|ADO17912.1| rhomboid protease 1 [Mycobacterium bovis BCG]
gi|308197796|gb|ADO17914.1| rhomboid protease 1 [Mycobacterium bovis]
gi|308352202|gb|EFP41053.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|308367674|gb|EFP56525.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|323717250|gb|EGB26458.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|328456817|gb|AEB02240.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
gi|392051930|gb|AFM47488.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
Length = 284
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 17/162 (10%)
Query: 47 GLSRNLVVY-----DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
GL R L ++ G+ YR + +LH +HLL N A+ +G LE G LR G L
Sbjct: 94 GLERQLALWPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGAL 153
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y +S GG +L L + T GASGA+FGL GA+ + + + +
Sbjct: 154 YAVSALGGSVLVYLIAPLNTAT----AGASGAVFGLFGAT-------FMVARRLHLDVRW 202
Query: 162 LILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
++ +I +N+A F+ P I H+GG V G L+ + P+
Sbjct: 203 VVALIVINLAFTFLAPAISWQGHVGGLVTGALVAATYVYAPR 244
>gi|455648311|gb|EMF27191.1| hypothetical protein H114_20747 [Streptomyces gancidicus BKS 13-15]
Length = 295
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 81/149 (54%), Gaps = 10/149 (6%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V DGE YR + M+ H + H+ N L++ +G LE+ G R LY++SG G L+
Sbjct: 127 VADGEWYRLVTSMFTHEEIWHIGFNMLSLWLLGGPLEQHLGRARYLALYLISGLAGSALT 186
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L +L GASGA+FGL GA + ++ Y + + + +LVI + + G
Sbjct: 187 YLLAGGGTASL----GASGAVFGLFGA--TAVLMRRLRYDMRPI---VALLVINLVITFG 237
Query: 174 FMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ GI AHIGG VAG+++G+ ++ P+
Sbjct: 238 WS-GIAWQAHIGGLVAGVVIGYAMVHAPR 265
>gi|56963491|ref|YP_175222.1| hypothetical protein ABC1726 [Bacillus clausii KSM-K16]
gi|56909734|dbj|BAD64261.1| conserved hypothetical protein [Bacillus clausii KSM-K16]
Length = 523
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 77/134 (57%), Gaps = 9/134 (6%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ +GE +R FS M+LH HL N +A+ F+G +E+ FG +R ++Y ++G
Sbjct: 215 GAKYNPLIVEGEWWRLFSAMFLHIGFFHLFMNGMALYFLGSAVEQLFGSIRFLVIYFMAG 274
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
G +S D +S GASGALFG GA L I +L+ + + ++++L+I
Sbjct: 275 LFGSAVSFAFTD------SLSAGASGALFGCFGALLYFGIKQPSLFF-RTLGRSVIVLLI 327
Query: 167 GVNMAIGFM-PGID 179
+N +GF+ PGID
Sbjct: 328 -INFFLGFIVPGID 340
>gi|392573734|gb|EIW66872.1| hypothetical protein TREMEDRAFT_34153 [Tremella mesenterica DSM
1558]
Length = 528
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 77/141 (54%), Gaps = 5/141 (3%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF ++LH +IHLL N A + IG ++E + G + ++Y+ G G +L
Sbjct: 308 QSWRFVLPIFLHVGIIHLLLNMAAQVTIGAQIEREMGTIPFLMVYMAGGIYGFVLG---- 363
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP- 176
+T SVGASGALF + ++ +W + +L++ V +AIG++P
Sbjct: 364 GNFSRTGIPSVGASGALFAINACVTVDLGLHWKYEPRPKLKAFLLLIEFCVGIAIGYIPN 423
Query: 177 GIDNMAHIGGFVAGILLGFIL 197
+D +AH+GGF G+L+G IL
Sbjct: 424 AVDGLAHLGGFAMGLLMGIIL 444
>gi|229818522|ref|YP_002880048.1| rhomboid family protein [Beutenbergia cavernae DSM 12333]
gi|229564435|gb|ACQ78286.1| Rhomboid family protein [Beutenbergia cavernae DSM 12333]
Length = 315
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 78/149 (52%), Gaps = 11/149 (7%)
Query: 57 GEI--YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
GE+ YRF S +LH ++HL N A+ +G LE+ G R L++LS GG +
Sbjct: 144 GEVQPYRFLSAAFLHGGLLHLAFNMYALWIVGGFLEQMLGRWRYAALFLLSAIGGSVGYL 203
Query: 115 LHQDESQQTLQIS-VGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L D + I VGASGA+FGL A I T + + + ++++I +N+ IG
Sbjct: 204 LLADPLSRAWTIPVVGASGAVFGLFAA-----IVFVLRSTGR--NASQILVLIAINVVIG 256
Query: 174 F-MPGIDNMAHIGGFVAGILLGFILLLRP 201
F +PGI AH+GG V G LL + P
Sbjct: 257 FVVPGIAWQAHLGGMVTGALLAVAFVYAP 285
>gi|68073903|ref|XP_678866.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56499464|emb|CAH94007.1| conserved hypothetical protein [Plasmodium berghei]
Length = 197
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 94/190 (49%), Gaps = 17/190 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
+ +GEI+R ++LHAN+ H N L +G LE+++G L++ +LY +SG G +LS
Sbjct: 16 IKNGEIHRLILPIFLHANIFHTFFNVFFQLRMGFTLEKNYGILKVAILYFVSGIYGNILS 75
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
S I VGAS + G+LG SE+I W + ++ + ++ +++
Sbjct: 76 -----SSVTYCTIKVGASTSGMGILGIVASELILLWHIIRHRERVVFNILFFTLISILYY 130
Query: 174 FM---PGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKL 230
F ID++ H+GG ++GI +G + Y P + N K Y C L
Sbjct: 131 FTFNGSNIDHIGHLGGLLSGISIGML--------YNEKMENKPTWYNNVKIASYAC-LVL 181
Query: 231 LWVISVVVLF 240
L ++ VVLF
Sbjct: 182 LAIVPTVVLF 191
>gi|408411064|ref|ZP_11182247.1| Membrane-associated serine protease [Lactobacillus sp. 66c]
gi|407874727|emb|CCK84053.1| Membrane-associated serine protease [Lactobacillus sp. 66c]
Length = 224
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
ST+ L K+G + VV +G+ +R F+ +LH ++H+ +N++ I +IG E FG
Sbjct: 32 ESTSVLLKMGAMYNPAVVVEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPIFGHW 91
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGA 140
R +LY+LSG GG LL+ + IS GAS ALFG+LGA
Sbjct: 92 RFLVLYLLSGTGGSLLTLAFGSDQ----AISAGASTALFGILGA 131
>gi|409350266|ref|ZP_11233445.1| Membrane-associated serine protease [Lactobacillus equicursoris CIP
110162]
gi|407877534|emb|CCK85503.1| Membrane-associated serine protease [Lactobacillus equicursoris CIP
110162]
Length = 224
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
ST+ L K+G + VV +G+ +R F+ +LH ++H+ +N++ I +IG E FG
Sbjct: 32 ESTSVLLKMGAMYNPAVVVEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPIFGHW 91
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGA 140
R +LY+LSG GG LL+ + IS GAS ALFG+LGA
Sbjct: 92 RFLVLYLLSGTGGSLLTLAFGSDQ----AISAGASTALFGILGA 131
>gi|15607252|ref|NP_214624.1| Probable conserved integral membrane protein [Mycobacterium
tuberculosis H37Rv]
gi|31791288|ref|NP_853781.1| hypothetical protein Mb0114 [Mycobacterium bovis AF2122/97]
gi|121636023|ref|YP_976246.1| integral membrane protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148659873|ref|YP_001281396.1| rhomboid family protein [Mycobacterium tuberculosis H37Ra]
gi|167967299|ref|ZP_02549576.1| conserved integral membrane protein [Mycobacterium tuberculosis
H37Ra]
gi|224988496|ref|YP_002643183.1| integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|254366565|ref|ZP_04982609.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|289441479|ref|ZP_06431223.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289568003|ref|ZP_06448230.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289572690|ref|ZP_06452917.1| rhomboid family protein [Mycobacterium tuberculosis K85]
gi|289748582|ref|ZP_06507960.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289756172|ref|ZP_06515550.1| rhomboid family protein [Mycobacterium tuberculosis EAS054]
gi|289760210|ref|ZP_06519588.1| rhomboid family protein [Mycobacterium tuberculosis T85]
gi|289764227|ref|ZP_06523605.1| rhomboid family protein [Mycobacterium tuberculosis GM 1503]
gi|294992953|ref|ZP_06798644.1| putative integral membrane protein [Mycobacterium tuberculosis 210]
gi|297632583|ref|ZP_06950363.1| putative integral membrane protein [Mycobacterium tuberculosis KZN
4207]
gi|297729557|ref|ZP_06958675.1| putative integral membrane protein [Mycobacterium tuberculosis KZN
R506]
gi|298527502|ref|ZP_07014911.1| rhomboid family serine protease [Mycobacterium tuberculosis
94_M4241A]
gi|306774194|ref|ZP_07412531.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|306778939|ref|ZP_07417276.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|306782726|ref|ZP_07421048.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|306787094|ref|ZP_07425416.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|306791651|ref|ZP_07429953.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|306798472|ref|ZP_07436774.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
gi|306801688|ref|ZP_07438356.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
gi|306805900|ref|ZP_07442568.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|306974529|ref|ZP_07487190.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|307082237|ref|ZP_07491407.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
gi|313656884|ref|ZP_07813764.1| putative integral membrane protein [Mycobacterium tuberculosis KZN
V2475]
gi|339630194|ref|YP_004721836.1| hypothetical protein MAF_01110 [Mycobacterium africanum GM041182]
gi|340625145|ref|YP_004743597.1| putative integral membrane protein [Mycobacterium canettii CIPT
140010059]
gi|378769856|ref|YP_005169589.1| hypothetical protein BCGMEX_0114 [Mycobacterium bovis BCG str.
Mexico]
gi|385996882|ref|YP_005915180.1| integral membrane protein [Mycobacterium tuberculosis CTRI-2]
gi|386003192|ref|YP_005921471.1| hypothetical protein MRGA423_00715 [Mycobacterium tuberculosis
RGTB423]
gi|392384830|ref|YP_005306459.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|397671894|ref|YP_006513428.1| hypothetical protein RVBD_0110 [Mycobacterium tuberculosis H37Rv]
gi|424806593|ref|ZP_18232024.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
gi|433625211|ref|YP_007258840.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140060008]
gi|31616873|emb|CAD92975.1| PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium bovis
AF2122/97]
gi|121491670|emb|CAL70128.1| Probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|134152077|gb|EBA44122.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|148504025|gb|ABQ71834.1| Rhomboid family protein [Mycobacterium tuberculosis H37Ra]
gi|224771609|dbj|BAH24415.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|289414398|gb|EFD11638.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289537121|gb|EFD41699.1| rhomboid family protein [Mycobacterium tuberculosis K85]
gi|289541756|gb|EFD45405.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289689169|gb|EFD56598.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289696759|gb|EFD64188.1| rhomboid family protein [Mycobacterium tuberculosis EAS054]
gi|289711733|gb|EFD75749.1| rhomboid family protein [Mycobacterium tuberculosis GM 1503]
gi|289715774|gb|EFD79786.1| rhomboid family protein [Mycobacterium tuberculosis T85]
gi|298497296|gb|EFI32590.1| rhomboid family serine protease [Mycobacterium tuberculosis
94_M4241A]
gi|308217202|gb|EFO76601.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308328061|gb|EFP16912.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|308332433|gb|EFP21284.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|308336197|gb|EFP25048.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|308339800|gb|EFP28651.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|308341295|gb|EFP30146.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
gi|308347577|gb|EFP36428.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|308351519|gb|EFP40370.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
gi|308356167|gb|EFP45018.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|308360107|gb|EFP48958.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
gi|326905869|gb|EGE52802.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
gi|339329550|emb|CCC25185.1| putative conserved integral membrane protein [Mycobacterium
africanum GM041182]
gi|340003335|emb|CCC42454.1| putative conserved integral membrane protein [Mycobacterium
canettii CIPT 140010059]
gi|341600039|emb|CCC62707.1| probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Moreau RDJ]
gi|344217928|gb|AEM98558.1| integral membrane protein [Mycobacterium tuberculosis CTRI-2]
gi|356592177|gb|AET17406.1| Conserved integral membrane protein [Mycobacterium bovis BCG str.
Mexico]
gi|378543381|emb|CCE35652.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|380723680|gb|AFE11475.1| putative integral membrane protein [Mycobacterium tuberculosis
RGTB423]
gi|395136798|gb|AFN47957.1| hypothetical protein RVBD_0110 [Mycobacterium tuberculosis H37Rv]
gi|432152817|emb|CCK50026.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140060008]
gi|440579558|emb|CCG09961.1| putative CONSERVED INTEGRAL membrane protein [Mycobacterium
tuberculosis 7199-99]
gi|444893582|emb|CCP42835.1| Probable conserved integral membrane protein [Mycobacterium
tuberculosis H37Rv]
Length = 249
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 47 GLSRNLVVY-----DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
GL R L ++ G+ YR + +LH +HLL N A+ +G LE G LR G L
Sbjct: 59 GLERQLALWPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGAL 118
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y +S GG +L L + T GASGA+FGL GA+ + + +
Sbjct: 119 YAVSALGGSVLVYLIAPLNTAT----AGASGAVFGLFGATF-------MVARRLHLDVRW 167
Query: 162 LILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
++ +I +N+A F+ P I H+GG V G L+ + P+
Sbjct: 168 VVALIVINLAFTFLAPAISWQGHVGGLVTGALVAATYVYAPR 209
>gi|433640241|ref|YP_007286000.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070008]
gi|432156789|emb|CCK54054.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070008]
Length = 249
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 47 GLSRNLVVY-----DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
GL R L ++ G+ YR + +LH +HLL N A+ +G LE G LR G L
Sbjct: 59 GLERQLALWPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGAL 118
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y +S GG +L L + T GASGA+FGL GA+ + + +
Sbjct: 119 YAVSALGGSVLVYLIAPLNTAT----AGASGAVFGLFGATF-------MVARRLHLDVRW 167
Query: 162 LILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
++ +I +N+A F+ P I H+GG V G L+ + P+
Sbjct: 168 VVALIVINLAFTFLAPAISWQGHVGGLVTGALVAATYVYAPR 209
>gi|298706194|emb|CBJ29235.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 256
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 16/150 (10%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
GE YR + + LH HL NS+A+ IG E G + LYV SG G +LSC+
Sbjct: 115 GEWYRLVTAVMLHGGWGHLAGNSMALFNIGRGTETYMGTEKFVALYVCSGVSGNVLSCI- 173
Query: 117 QDESQQTLQISVGASGALFGLLGAS----LSEIITNWTLYTNKCVSITMLILVIGVNMAI 172
L S+GASGA+FGLLGA L+ + L+ + +++G+
Sbjct: 174 ----VDPLTPSLGASGAIFGLLGAEAMIHLAGPKASMPLFVSSVGQTAFFAVLVGL---- 225
Query: 173 GFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+P ID+ H+GGFV G L LL++P+
Sbjct: 226 -LVPNIDHWGHLGGFVGGAAL--TLLIQPR 252
>gi|384250948|gb|EIE24426.1| U-box-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 578
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
++N L GPS A L+ LG LS + +V + +R + ++L + +I L+ + + GV +
Sbjct: 294 AQNPLVGPSEAALRALGSLSTSDIVDRRQYWRLITSIFLCSGIIELVLAVMTLWAFGVHV 353
Query: 90 EE--DFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIIT 147
F + + LY+L G G L+S + T SVGA A+ GL+GA+L++ I
Sbjct: 354 SRALRFSAVSVAALYILPGIVGALVSV-----NLSTDVPSVGAPAAVCGLIGAALADQIV 408
Query: 148 NWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHI-GGFVAGILLGFILLLRPQYGYV 206
Y N ++ ML + I G +P ++ I G VAG L ++ L P V
Sbjct: 409 GSKAYRNHACTLIMLAVAIAQFTITGLLPLSSDLFFIVGSMVAGAL---VMCLLPSVEAV 465
Query: 207 SGPYI 211
P I
Sbjct: 466 QRPLI 470
>gi|238061764|ref|ZP_04606473.1| rhomboid family protein [Micromonospora sp. ATCC 39149]
gi|237883575|gb|EEP72403.1| rhomboid family protein [Micromonospora sp. ATCC 39149]
Length = 303
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 78/149 (52%), Gaps = 10/149 (6%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
+ GE YR + M+LH V+HLL N A+ +G LE + G LR LY+++GFGG + +
Sbjct: 134 IVQGEWYRLVTAMFLHYGVVHLLLNMWALWVLGRSLEANLGPLRFLALYLIAGFGGNVAA 193
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L E+ T GAS A+FGL A + +I + +S + +LVI + +
Sbjct: 194 YLFSAENATT----AGASTAIFGLFAALI--VIER---RMGRDISSVLPVLVINLVFTL- 243
Query: 174 FMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+PGI H+GG V G + +L P+
Sbjct: 244 TVPGISIPGHLGGLVTGGAMALMLAYAPR 272
>gi|254549044|ref|ZP_05139491.1| putative integral membrane protein [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length = 247
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 47 GLSRNLVVY-----DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
GL R L ++ G+ YR + +LH +HLL N A+ +G LE G LR G L
Sbjct: 57 GLERQLALWPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGAL 116
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y +S GG +L L + T GASGA+FGL GA+ + + +
Sbjct: 117 YAVSALGGSVLVYLIAPLNTAT----AGASGAVFGLFGATF-------MVARRLHLDVRW 165
Query: 162 LILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
++ +I +N+A F+ P I H+GG V G L+ + P+
Sbjct: 166 VVALIVINLAFTFLAPAISWQGHVGGLVTGALVAATYVYAPR 207
>gi|324510125|gb|ADY44240.1| Rhomboid-related protein 2 [Ascaris suum]
Length = 344
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 34/190 (17%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E++R+ + M++H HL+ N L + +GV LE RI L+Y+ G LL +
Sbjct: 164 EVWRYLTYMFIHIGFYHLIFNVLTQILLGVPLELVHKQWRIALVYLSGVLAGSLLVAVVD 223
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAI----- 172
+ GASG ++ LL A ++E++ NW+ + +L ++I + A+
Sbjct: 224 PRTYLA-----GASGGVYALLAAHIAELLLNWSEMEFALLRTIVLAILISSDAAVAVYQR 278
Query: 173 ---GFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQK 229
G + I ++HIGGFVAG+L+G I +LR N +K ++ ++
Sbjct: 279 YYAGMINKISYVSHIGGFVAGVLMG-ITVLR-----------------NFRKKRW---ER 317
Query: 230 LLWVISVVVL 239
++W ++V+L
Sbjct: 318 VMWWTAIVIL 327
>gi|261408389|ref|YP_003244630.1| Rhomboid family protein [Paenibacillus sp. Y412MC10]
gi|261284852|gb|ACX66823.1| Rhomboid family protein [Paenibacillus sp. Y412MC10]
Length = 204
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 77/153 (50%), Gaps = 4/153 (2%)
Query: 41 TLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGL 100
TL K G LS +L + + +R+F+ M+LH HLL NS A+L LE G + +
Sbjct: 44 TLLKYGALS-DLPQFVDQAWRYFTAMFLHNGFDHLLFNSFALLVFVPPLERIMGSWKFAI 102
Query: 101 LYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSIT 160
LY+LSG G ++ + E + VGASGA++G GA L + +
Sbjct: 103 LYLLSGVLGNVIGLAYY-ERMDSYTFLVGASGAIYGAYGAYLYIALFQQHVIDESSRKTL 161
Query: 161 MLILVIGVNMAIGFMPGIDNMAHIGGFVAGILL 193
+L++G+ F PG+ +AH+GG V G L
Sbjct: 162 FTLLILGI--LFSFTPGVSLVAHVGGLVGGFFL 192
>gi|427392549|ref|ZP_18886554.1| hypothetical protein HMPREF9698_00360 [Alloiococcus otitis ATCC
51267]
gi|425731229|gb|EKU94048.1| hypothetical protein HMPREF9698_00360 [Alloiococcus otitis ATCC
51267]
Length = 228
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 12/163 (7%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
+T L + G ++Y + +R + M+LH + H+L N L + ++G LE FG +
Sbjct: 39 NTEVLIQYGAKFNFAIIYFNQWWRLITPMFLHIGLAHILFNLLIVYYLGSNLEYFFGHFK 98
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGAS--LSEIITNWTLYTNK 155
LLY+L G G + S + IS GAS A+FGL ++ LS I N N
Sbjct: 99 YALLYLLGGIMGNIFSFAFN------ISISAGASTAIFGLFMSTIALSRIYPNRIQIQNI 152
Query: 156 CVSITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFIL 197
+L IG+N+ IG + GIDNM H+GG V G L +++
Sbjct: 153 ASQYGLL---IGLNIFIGILSTGIDNMGHLGGLVGGYLATYMI 192
>gi|237843485|ref|XP_002371040.1| rhomboid family domain-containing protein [Toxoplasma gondii ME49]
gi|50845220|gb|AAT84607.1| rhomboid protease 3 [Toxoplasma gondii]
gi|211968704|gb|EEB03900.1| rhomboid family domain-containing protein [Toxoplasma gondii ME49]
Length = 263
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 35 FGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
+ P+ TL LG + + +++R + ++LHA ++HL+ N + IL I ++LEE +G
Sbjct: 60 YEPNERTLMLLGA-AYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYG 118
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
+ + Y LS G LLS L Q +SVGAS A FG++G +E+ W +
Sbjct: 119 TKKFLVTYFLSAIVGNLLSML-----MQPWALSVGASTAGFGIIGGMAAEVSVVWCKLSE 173
Query: 155 KCVSI-TMLILVIGVNMA-IGFMPGIDNMAHIGGFVAGILL 193
+ I +M I ++ V + + F +D H+GGF+AG+ L
Sbjct: 174 ELKRIYSMDICILAVLIYFLSFGRTVDTFGHLGGFLAGVAL 214
>gi|120406695|ref|YP_956524.1| rhomboid family protein [Mycobacterium vanbaalenii PYR-1]
gi|119959513|gb|ABM16518.1| Rhomboid family protein [Mycobacterium vanbaalenii PYR-1]
Length = 290
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 18/141 (12%)
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
DGE+YR + +LH +V H+ N LA+ F+G LE G LR LY+ S GG +L L
Sbjct: 114 DGELYRLLTSAFLHFSVTHIAFNMLALYFVGAPLEFALGRLRFVALYLFSALGGSVLVYL 173
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM 175
+ ++ GASGA+FGL GA+ + + + + ++++IG+N+A F+
Sbjct: 174 LTFNA-----LTAGASGAVFGLFGAT-------FVVGKRLNMDVRSVVMIIGLNLAFTFL 221
Query: 176 ------PGIDNMAHIGGFVAG 190
I HIGG V G
Sbjct: 222 IPLFTSQNISWQGHIGGLVTG 242
>gi|210613903|ref|ZP_03289967.1| hypothetical protein CLONEX_02180 [Clostridium nexile DSM 1787]
gi|210150928|gb|EEA81936.1| hypothetical protein CLONEX_02180 [Clostridium nexile DSM 1787]
Length = 197
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 95/174 (54%), Gaps = 10/174 (5%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILF 84
SF R+E+ ++ + + G + VV E YR F+C++LH HL+ N L ++
Sbjct: 25 SFGGRTEDGMY------MLEHGAMYVPYVVEYKEYYRLFTCIFLHFGFSHLMNNMLTLVV 78
Query: 85 IGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSE 144
+G +E G R +Y+LS GG L + D +Q +S GASGA+FGL GA L
Sbjct: 79 VGWNVEMFVGKARFLTIYLLS-GLGGNLLSMAADIWRQDYSVSAGASGAIFGLTGALLCL 137
Query: 145 IITNWTLYTNKCVSITMLILVIGVNMAIGFMP-GIDNMAHIGGFVAGILLGFIL 197
I N N ++ +I++I +++ GF G+DN+AH+GG + GIL+ +L
Sbjct: 138 AILNHGRVGN--ITKQGMIVMILISLYTGFTSGGVDNLAHVGGLLTGILVTALL 189
>gi|389583684|dbj|GAB66418.1| rhomboid-like protease 1 [Plasmodium cynomolgi strain B]
Length = 278
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 22/210 (10%)
Query: 37 PSTATLKKLGG--LSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
PS + L LG SR + GEI+R ++LHAN+ H N L +G LE+++G
Sbjct: 81 PSDSLLITLGANVASR---IKQGEIHRLILPIFLHANIFHTFFNVFFQLRMGFTLEKNYG 137
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
+++ +LY L+G G +LS S I VGAS + GLLG SE++ W + +
Sbjct: 138 IVKVIILYFLTGIYGNILS-----SSVTYCPIKVGASTSGMGLLGVVTSELLLLWHIIRH 192
Query: 155 KCVSITMLILVIGVNMAIGFM---PGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYI 211
+ I +I ++ F ID++ H+GG ++GI +G + Y S
Sbjct: 193 RERVIFNVIFFSLISFFYYFTFNGSNIDHVGHLGGLLSGISMGIL--------YNSQMEN 244
Query: 212 APGYELNHKKPKYQCHQKLLWVISVVVLFV 241
P + + K Y C LL ++ +VLF
Sbjct: 245 KPSWYDHMKIVSYSC-LALLAIVPPIVLFT 273
>gi|320102859|ref|YP_004178450.1| rhomboid family protein [Isosphaera pallida ATCC 43644]
gi|319750141|gb|ADV61901.1| Rhomboid family protein [Isosphaera pallida ATCC 43644]
Length = 694
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 76/144 (52%), Gaps = 10/144 (6%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E +R + M+LH ++HL N+ + +G +E FG +Y+++G GG S
Sbjct: 338 ESWRALTMMFLHVGILHLAMNAWCLWVVGPLIERMFGHGSFLAIYLIAGLGGATASL--- 394
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV---IGVNMAIGF 174
+ + +S GASGA+FGL+GA L + V+ T+ V + +N+AIG
Sbjct: 395 --AWHPINLSAGASGAVFGLIGA-LGAASLHRPQSIPPLVARTLSRAVWGFVALNLAIGL 451
Query: 175 -MPGIDNMAHIGGFVAGILLGFIL 197
+P IDN AH+GG V G L G IL
Sbjct: 452 SLPMIDNAAHLGGLVCGFLAGAIL 475
>gi|221484805|gb|EEE23099.1| peptidase S54 family protein [Toxoplasma gondii GT1]
Length = 263
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 35 FGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
+ P+ TL LG + + +++R + ++LHA ++HL+ N + IL I ++LEE +G
Sbjct: 60 YEPNERTLMLLGA-AYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYG 118
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
+ + Y LS G LLS L Q + +SVGAS A FG++G +E+ W +
Sbjct: 119 TKKFLVTYFLSAIVGNLLSMLMQPWA-----LSVGASTAGFGIIGGMAAEVSVVWCKLSE 173
Query: 155 KCVSI-TMLILVIGVNMA-IGFMPGIDNMAHIGGFVAGILL 193
+ I +M I ++ V + + F +D H+GGF+AG+ L
Sbjct: 174 ELKRIYSMDICILAVLIYFLSFGRTVDTFGHLGGFLAGVAL 214
>gi|423219507|ref|ZP_17206003.1| hypothetical protein HMPREF1061_02776 [Bacteroides caccae
CL03T12C61]
gi|392625402|gb|EIY19471.1| hypothetical protein HMPREF1061_02776 [Bacteroides caccae
CL03T12C61]
Length = 584
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST L K G L + G+ +R +C ++H HLL N A ++IG+ LE+
Sbjct: 179 ILEPSTLALLKWGADFGPLTL-TGDWWRAITCNFIHIGAFHLLMNMYAFMYIGLWLEDLI 237
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G S E+ IS GASGA+FGL G L+ ++ +
Sbjct: 238 GTRRMFISYLLTGVCSAAFSLYMHAET-----ISAGASGAIFGLYGIFLAFLLFHHIPRA 292
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHI 184
+ + ++L +G N+ G GIDN AHI
Sbjct: 293 QRKALLISILLFVGYNLVYGMKAGIDNAAHI 323
>gi|195135164|ref|XP_002012004.1| GI16668 [Drosophila mojavensis]
gi|193918268|gb|EDW17135.1| GI16668 [Drosophila mojavensis]
Length = 398
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 20/156 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E++RFFS M+LHAN HL N + LF GV LE G RIG++Y+ F G L + +
Sbjct: 189 EVWRFFSYMFLHANWFHLGFNIIIQLFFGVPLEVMHGTARIGVIYLAGVFAGSLGTSVVD 248
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM------- 170
E VGASG ++ LL A L+ I N+ + + +++ + ++
Sbjct: 249 SEV-----FLVGASGGVYALLAAHLANITLNYAHMKSASTQLGSVVIFVSCDLGYALYTQ 303
Query: 171 --------AIGFMPGIDNMAHIGGFVAGILLGFILL 198
A P + +AH+ G +AG+ +GF++L
Sbjct: 304 YFDGAATPAFAKGPQVSYIAHLTGALAGLTIGFLVL 339
>gi|74793159|sp|Q6IUY1.1|RHBL3_TOXGO RecName: Full=Rhomboid-like protease 3
gi|48093077|gb|AAT39987.1| rhomboid-like protease ROM3 [Toxoplasma gondii]
Length = 263
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 35 FGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
+ P+ TL LG + + +++R + ++LHA ++HL+ N + IL I ++LEE +G
Sbjct: 60 YEPNERTLMLLGA-AYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYG 118
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
+ + Y LS G LLS L Q +SVGAS A FG++G +E+ W +
Sbjct: 119 TKKFLVTYFLSAIVGNLLSML-----MQPWALSVGASTAGFGIIGGMAAEVSVVWCKLSE 173
Query: 155 KCVSI-TMLILVIGVNMA-IGFMPGIDNMAHIGGFVAGILL 193
+ I +M I ++ V + + F +D H+GGF+AG+ L
Sbjct: 174 ELKRIYSMDICILAVLIYFLSFGRTVDTFGHLGGFLAGVAL 214
>gi|153808412|ref|ZP_01961080.1| hypothetical protein BACCAC_02706 [Bacteroides caccae ATCC 43185]
gi|149128734|gb|EDM19951.1| peptidase, S54 family [Bacteroides caccae ATCC 43185]
Length = 584
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 34 LFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDF 93
+ PST L K G L + G+ +R +C ++H HLL N A ++IG+ LE+
Sbjct: 179 ILEPSTLALLKWGADFGPLTL-TGDWWRAITCNFIHIGAFHLLMNMYAFMYIGLWLEDLI 237
Query: 94 GFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYT 153
G R+ + Y+L+G S E+ IS GASGA+FGL G L+ ++ +
Sbjct: 238 GTRRMFISYLLTGVCSAAFSLYMHAET-----ISAGASGAIFGLYGIFLAFLLFHHIPRA 292
Query: 154 NKCVSITMLILVIGVNMAIGFMPGIDNMAHI 184
+ + ++L +G N+ G GIDN AHI
Sbjct: 293 QRKALLISILLFVGYNLVYGMKAGIDNAAHI 323
>gi|168186765|ref|ZP_02621400.1| conserved membrane protein [Clostridium botulinum C str. Eklund]
gi|169295367|gb|EDS77500.1| conserved membrane protein [Clostridium botulinum C str. Eklund]
Length = 202
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 21/195 (10%)
Query: 1 MYVNNCPKNLGEDRCVFHDHLGRFSFQPRSENSLFGPSTATLKK-----------LGGLS 49
M N+ K++G R + + R +F + N L TA L + G +
Sbjct: 1 MEQNSKIKSIGS-RIRYTKNTSRVTFILITINVLVYIITAILSENILDSDIRVLLFLGAN 59
Query: 50 RNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGG 109
N +V G+ YR +CM+LH ++HL N A+ IG +E +G ++ ++Y++ G
Sbjct: 60 ENTLVSSGQYYRLITCMFLHGGLVHLALNMYALEAIGPIVERIYGKMKYIIIYLV----G 115
Query: 110 GLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVN 169
GL+S L + +S+GASGA+F LLGA I + K V I ++ VIG+N
Sbjct: 116 GLISSL--SSYVFSTGVSIGASGAIFALLGAMFVLTIKMRDV-VGKAV-IKNIVSVIGIN 171
Query: 170 MAIGF-MPGIDNMAH 183
+ IG +P IDN AH
Sbjct: 172 IFIGLAIPNIDNFAH 186
>gi|254572129|ref|XP_002493174.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032972|emb|CAY70995.1| Hypothetical protein PAS_chr3_0934 [Komagataella pastoris GS115]
gi|328352810|emb|CCA39208.1| Rhomboid family member 1 [Komagataella pastoris CBS 7435]
Length = 562
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+R + M+LHA IH++ N L + + +E G +R G +Y+ SG G +L
Sbjct: 267 WRMITPMFLHAGFIHIIFNLLLQMTLAYNIERVIGPIRYGTIYLASGVAGFVLGSNFSPV 326
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTL-----YTNKCVSITMLILVIGVNMA--- 171
S GASGAL G++ ++ +IT + K V + +++ V++
Sbjct: 327 GVS----STGASGALLGVMAVNILLLITTKSTAHFGGVKGKQVPVRNFKVILIVSIVELV 382
Query: 172 ----IGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPK 223
+G +PG+DN AHIGGF G+LLG L+ P + Y G Y E +K K
Sbjct: 383 IIFFLGLLPGLDNFAHIGGFAMGLLLGLTLIDDPFFVYDKGYYNKIYTERTSQKEK 438
>gi|333395939|ref|ZP_08477756.1| membrane-associated serine protease [Lactobacillus coryniformis
subsp. coryniformis KCTC 3167]
gi|420145094|ref|ZP_14652570.1| Membrane-associated serine protease [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
gi|398403329|gb|EJN56584.1| Membrane-associated serine protease [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
Length = 223
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 87/164 (53%), Gaps = 9/164 (5%)
Query: 33 SLFGPS-TATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEE 91
+LFG S + + G N+++ G+ +R ++LH+ ++H+ NS+ + FIG+++E
Sbjct: 30 TLFGGSQNSNVLVFFGAKVNILIQQGQWWRLIMPIFLHSGLMHIAVNSVTLYFIGMQIES 89
Query: 92 DFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTL 151
FG R L+Y+LSG G + S + + ISVGAS ALFGL GA ++ +
Sbjct: 90 LFGHWRFTLIYLLSGIVGNIASFVF------NMGISVGASTALFGLFGA-FFMLVEAFRQ 142
Query: 152 YTNKCVSITMLILVIGVNMAIG-FMPGIDNMAHIGGFVAGILLG 194
T L I +N+A F PGID H+GG + G L+
Sbjct: 143 NTAIRAMGQQFALFIVLNLAFDLFNPGIDLAGHVGGLLGGFLVA 186
>gi|449015504|dbj|BAM78906.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 364
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/181 (34%), Positives = 98/181 (54%), Gaps = 14/181 (7%)
Query: 31 ENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLE 90
E L G ++ L LG N + G+++R F+ ++LH ++HLL+N+ A+ I + E
Sbjct: 130 EGKLSGANSNILLALGA-KINSAIAAGQLWRLFTPIFLHGGLLHLLSNTYALYAISYECE 188
Query: 91 EDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWT 150
+G L ++Y+ SG G LLS T +SVGAS ++FGL A + ++ N+
Sbjct: 189 MAYGPLAFAVIYLASGAWGNLLSYWF------TPYLSVGASSSIFGLFSAYIVYLVNNYA 242
Query: 151 LYTNKCV-SITMLILVIGVNMAIGFMPG--IDNMAHIGGFVAGILLGFI----LLLRPQY 203
+ + IT+L+ ++ N A G PG IDN AH+GG +AG LL I L+LR
Sbjct: 243 ILGRQARRQITVLVALVVFNFAFGSTPGDAIDNSAHLGGAIAGALLSEIVVPELILRDAN 302
Query: 204 G 204
G
Sbjct: 303 G 303
>gi|83745575|ref|ZP_00942633.1| transmembrane hypothetical [Ralstonia solanacearum UW551]
gi|83727652|gb|EAP74772.1| transmembrane hypothetical [Ralstonia solanacearum UW551]
Length = 569
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V GE +R S +LHA V+HL N + + G+ +E +G L+Y+ +G G LS
Sbjct: 248 VQHGEWWRLLSATFLHAGVLHLAINMVGLYATGIAVERIYGPAAYLLIYLGAGLLGSALS 307
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVS--ITMLILVIGVNMA 171
+ I VGASGA+FG+ GA L I L +T L L + ++A
Sbjct: 308 LSFAAQH----AIGVGASGAVFGVAGAWLVAIGRYRGLMPQTLSKRLLTQLGLFVLYSLA 363
Query: 172 IGFM-PGIDNMAHIGGFVAGILLGFILLLR 200
G PG+DN AHIGG V G +L IL R
Sbjct: 364 QGLTKPGVDNAAHIGGLVGGCMLAMILPAR 393
>gi|297564157|ref|YP_003683130.1| rhomboid family protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296848606|gb|ADH70624.1| Rhomboid family protein [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 306
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 11/150 (7%)
Query: 52 LVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGL 111
L V GE YR + +LH ++ HLL N A+ +G +LE G +R L+VL F G +
Sbjct: 131 LGVLPGEWYRLLTAAFLHGSIFHLLFNGYAMYLLGTQLERWLGHVRFLTLWVLGAFAGSV 190
Query: 112 LSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMA 171
LS L + Q SVGASGA+F L GA L +I + + + +++ ++ +
Sbjct: 191 LSLLAEPN-----QFSVGASGAIFALFGAVL--VIGRRLRLDLRMIGVLLVVNLVLTFV- 242
Query: 172 IGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
+P I AHIGG VAG+ LG + P
Sbjct: 243 ---VPNISWTAHIGGLVAGLALGAVFAYLP 269
>gi|366053016|ref|ZP_09450738.1| membrane-associated serine protease [Lactobacillus suebicus KCTC
3549]
Length = 223
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 86/158 (54%), Gaps = 12/158 (7%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
++ +G+ +R + ++LH ++HL+ NS+ + +IG ++E FG R +Y +S G L
Sbjct: 49 LIQEGQWWRLITPVFLHIGLMHLVVNSVTVYYIGTQIENMFGHARFLSIYFVSALTGNLA 108
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSI--TMLILVIGVNM 170
S + S +S GAS A+FGL GA L + + + N + + + + +N+
Sbjct: 109 SFVFLPNS-----LSAGASTAIFGLFGAFL---MLGESFHHNPYIRLLSRQFLTFVAINL 160
Query: 171 AIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVS 207
FMPGID H+GG V G L+G++ + PQ G ++
Sbjct: 161 VFDLFMPGIDIYGHLGGLVGGFLMGYV-VGTPQIGKIN 197
>gi|350416907|ref|XP_003491162.1| PREDICTED: inactive rhomboid protein 1-like, partial [Bombus
impatiens]
Length = 888
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 23/185 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR F+ M+LHA V+HL + F+ LE+ G LRI L+Y + G L S +
Sbjct: 681 QFYRLFTTMFLHAGVLHLSITLMVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 740
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +GA F LL + E++ W + + ++ LI V+ + +G +P
Sbjct: 741 -----PYRAEVGPAGAHFALLATLIVEVLHCWPMLKHPRRVLSKLIFVLLGLLILGMLPW 795
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWV--IS 235
+DN AH+ GF+ G L + L+ P+I+ G+ +K L+W+ I
Sbjct: 796 VDNYAHLFGFIFGFLAAYALM----------PFISFGHYDRRRKI------WLIWICLIL 839
Query: 236 VVVLF 240
+VVLF
Sbjct: 840 IVVLF 844
>gi|345857374|ref|ZP_08809813.1| rhomboid family protein [Desulfosporosinus sp. OT]
gi|344329492|gb|EGW40831.1| rhomboid family protein [Desulfosporosinus sp. OT]
Length = 328
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 73/138 (52%), Gaps = 9/138 (6%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE++R + +++H +IHL N A+ +G EE FG + ++Y+ SG
Sbjct: 175 GAKVNDLIQAGEVWRLLTSIFIHIGIIHLAFNLYALRALGPLTEEFFGHPKFLMIYMFSG 234
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
GG + S L +S GASGA+FGLLGA L I L+ K L++VI
Sbjct: 235 LGGSIASYLFSPA------LSAGASGAIFGLLGALLYYCIKRPYLW--KSGLGMNLVVVI 286
Query: 167 GVNMAIGF-MPGIDNMAH 183
VN G PGIDN AH
Sbjct: 287 LVNFGFGISQPGIDNYAH 304
>gi|422421998|ref|ZP_16498951.1| rhomboid family protein, partial [Listeria seeligeri FSL S4-171]
gi|313638066|gb|EFS03339.1| rhomboid family protein [Listeria seeligeri FSL S4-171]
Length = 424
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
N ++Y GE +RF S ++LH+ +IHL +N++ + +G E +G R L+ ++ G G
Sbjct: 134 NPLIYAGEWWRFISPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYALILIIGGICGN 193
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
+ S + +S+GAS A+F ++GA L ++ +Y K + +++ LV VN+
Sbjct: 194 IASF------ALNMNLSIGASTAVFAVMGALLYLVVLKPNVYA-KTIGVSIASLV-AVNL 245
Query: 171 AIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
+ F ID HIGG V G LL L L Q+
Sbjct: 246 LLDVFSSQIDIAGHIGGLVGGFLLAGALSLPNQF 279
>gi|221504981|gb|EEE30646.1| rhomboid, putative [Toxoplasma gondii VEG]
Length = 263
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 8/161 (4%)
Query: 35 FGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
+ P+ TL LG + + +++R + ++LHA ++HL+ N + IL I ++LEE +G
Sbjct: 60 YEPNERTLMLLGA-AYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYG 118
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
+ + Y LS G LLS L Q + +SVGAS A FG++G +E+ W +
Sbjct: 119 TKKFLVTYFLSAIVGNLLSMLMQPWA-----LSVGASTAGFGIIGGMAAEVSVVWCKLSE 173
Query: 155 KCVSI-TMLILVIGVNMA-IGFMPGIDNMAHIGGFVAGILL 193
+ I +M I ++ V + + F +D H+GGF+AG+ L
Sbjct: 174 ELKRIYSMDICILAVLIYFLSFGRTVDTFGHLGGFLAGVAL 214
>gi|404443258|ref|ZP_11008430.1| rhomboid family protein [Mycobacterium vaccae ATCC 25954]
gi|403655930|gb|EJZ10759.1| rhomboid family protein [Mycobacterium vaccae ATCC 25954]
Length = 289
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 18/141 (12%)
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
DGE+YR + +LH +V H+ N LA+ F+G LE G LR LY+LS GG +L L
Sbjct: 113 DGELYRLVTSAFLHFSVTHIAFNMLALYFVGPPLEHALGRLRFVALYLLSALGGSVLVYL 172
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM 175
+ ++ GASGA+FGL GA+ + + + + ++ +IG+N+A F+
Sbjct: 173 LTFNA-----LTAGASGAVFGLFGAT-------FVVGRKLNMDVRSVLAIIGLNLAFTFL 220
Query: 176 ------PGIDNMAHIGGFVAG 190
I HIGG V G
Sbjct: 221 IPLFTSQNISWQGHIGGLVTG 241
>gi|162956852|gb|ABY25840.1| rhomboid [Drosophila melanica]
Length = 294
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/158 (34%), Positives = 81/158 (51%), Gaps = 24/158 (15%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+++RFFS M+LHAN HL N + LF GV LE G LRIG++Y+ F G L + +
Sbjct: 85 QVWRFFSYMFLHANWFHLGFNIIIQLFFGVPLEVMHGTLRIGVIYLAGVFAGSLGTSVVD 144
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM-- 175
E VGASG ++ LL A L+ I N+ K S + +VI V+ +G+
Sbjct: 145 SEV-----FLVGASGGVYALLAAHLANITLNYA--HMKSASTQLGSVVIFVSCDLGYALY 197
Query: 176 ---------------PGIDNMAHIGGFVAGILLGFILL 198
P + +AH+ G +AG+ +GF++L
Sbjct: 198 TQYFDGAATPTFAKGPQVSYIAHLTGALAGLTIGFLVL 235
>gi|237841881|ref|XP_002370238.1| rhomboid-like protease 5 [Toxoplasma gondii ME49]
gi|74787537|sp|Q6GV23.1|RHBL5_TOXGO RecName: Full=Rhomboid-like protease 5; AltName: Full=Microneme
protein protease 1; Short=MPP-1
gi|48927994|gb|AAT47708.1| rhomboid-like protease 5 [Toxoplasma gondii]
gi|95007124|emb|CAJ20345.1| rhomboid-like protease 5 [Toxoplasma gondii RH]
gi|211967902|gb|EEB03098.1| rhomboid-like protease 5 [Toxoplasma gondii ME49]
gi|221482707|gb|EEE21045.1| rhomboid-like protease 5 [Toxoplasma gondii GT1]
Length = 841
Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
Query: 29 RSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTN---SLAILFI 85
RS + P+ LG L N V GE++R M+LH +HLL N L+I
Sbjct: 434 RSPAAFDSPNPRVFSSLGALDTNKVRNYGEMFRVVWGMFLHGGWMHLLLNVSCQAQTLWI 493
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
LE +GFLR L+++ G G LLS + ++VG+SGA +GLLGA +
Sbjct: 494 ---LEPAWGFLRTLSLWIVGGVSGSLLSAV-----ANPCTVTVGSSGAFYGLLGALVPFS 545
Query: 146 ITNWTLYTNK-----CVSITMLILVIGVNMAIGFMPGIDNMAH 183
I W + CVS+ +++ G NM +G + G+DN AH
Sbjct: 546 IEYWDHIASPAWFLFCVSVLVMVAQFG-NM-VG-VQGVDNNAH 585
>gi|94312789|ref|YP_585998.1| intramembrane serine protease [Cupriavidus metallidurans CH34]
gi|93356641|gb|ABF10729.1| putative intramembrane serine protease [Cupriavidus metallidurans
CH34]
Length = 554
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 83/153 (54%), Gaps = 11/153 (7%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
+ DG+ +R + +LH ++ HL N + + +G +E FG L+YV +G G L
Sbjct: 235 LTQDGQWWRLLTATFLHGSLKHLAANMVVLYLLGTHVERFFGTRSFLLIYVGAGLLGSAL 294
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASL-SEIITNWTL---YTNKCVSITMLILVIGV 168
S ++ +SVGASGA+FG+ GA L + ++ L N+ VS +++IG
Sbjct: 295 SLYFAAQA----SVSVGASGAVFGIGGALLVAALLHRRELPQSIRNRLVSDA--VIMIGY 348
Query: 169 NMAIGFMPG-IDNMAHIGGFVAGILLGFILLLR 200
++A GF+ +DN AH+GG + G LL L +R
Sbjct: 349 SLAQGFLSTRVDNAAHVGGLIGGALLALCLPVR 381
>gi|422418937|ref|ZP_16495892.1| rhomboid family protein [Listeria seeligeri FSL N1-067]
gi|313633378|gb|EFS00218.1| rhomboid family protein [Listeria seeligeri FSL N1-067]
Length = 414
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
N ++Y GE +RF S ++LH+ +IHL +N++ + +G E +G R L+ ++ G G
Sbjct: 124 NPLIYAGEWWRFISPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYALILIIGGICGN 183
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
+ S + +S+GAS A+F ++GA L ++ +Y K + +++ LV VN+
Sbjct: 184 IASF------ALNMNLSIGASTAVFAVMGALLYLVVLKPNVYA-KTIGVSIASLV-AVNL 235
Query: 171 AIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
+ F ID HIGG V G LL L L Q+
Sbjct: 236 LLDVFSSQIDIAGHIGGLVGGFLLAGALSLPNQF 269
>gi|194747312|ref|XP_001956096.1| GF24766 [Drosophila ananassae]
gi|190623378|gb|EDV38902.1| GF24766 [Drosophila ananassae]
Length = 365
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 21/155 (13%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+++RFFS M+LHAN HL N + LF G+ LE G RIG++Y+ F G L + +
Sbjct: 159 QVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVD 218
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM-- 175
E VGASG ++ LL A L+ I N+ K S + +VI V+ +G+
Sbjct: 219 SEV-----FLVGASGGVYALLAAHLANITLNYA--HMKSASTQLGSVVIFVSCDLGYALY 271
Query: 176 ------------PGIDNMAHIGGFVAGILLGFILL 198
P + +AH+ G +AG+ +GF++L
Sbjct: 272 TQYFDGGAFVKGPQVSYIAHLTGALAGLTIGFLVL 306
>gi|425737376|ref|ZP_18855649.1| hypothetical protein C273_03260 [Staphylococcus massiliensis S46]
gi|425482724|gb|EKU49880.1| hypothetical protein C273_03260 [Staphylococcus massiliensis S46]
Length = 484
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 90/152 (59%), Gaps = 8/152 (5%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
LG L+ VV+ GE +R + M+LH N H+L N L++ G LE G R+ +Y+L
Sbjct: 189 LGALAHFNVVH-GEWHRLITSMFLHLNFEHILFNMLSLFIFGKLLESILGSWRMFGVYML 247
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL 164
SG G L++ ++ S+GASGA+FGL+G+ ++ +I + + + + +L L
Sbjct: 248 SGIIGNLVTLAFSPDT-----FSLGASGAIFGLIGSLIACMIISQK-FDQRTIGQLLLAL 301
Query: 165 VIGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+I V +++ F+ I+ +AHIGG + G+L+ F+
Sbjct: 302 LIMVVISL-FISNINVLAHIGGLLGGVLVTFL 332
>gi|430376422|ref|ZP_19430825.1| rhomboid-like protein [Moraxella macacae 0408225]
gi|429541653|gb|ELA09681.1| rhomboid-like protein [Moraxella macacae 0408225]
Length = 265
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 82/148 (55%), Gaps = 10/148 (6%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS---- 113
E +R + + LH ++HL+ N A+ + G E+ G + + +L+VLSG GG LL+
Sbjct: 71 EPFRLITSLVLHIGLLHLMFNMYALYYFGQVAEQMIGSINLLILFVLSGIGGNLLNNFLA 130
Query: 114 --CLHQDESQQTLQI--SVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVN 169
L +ES QI S GASG + G +GA+L T ++ L+LV+ +N
Sbjct: 131 LQTLLNNESINRGQIGVSAGASGGIMG-IGAALLMTALLRTPINQIGLNFRSLLLVMAIN 189
Query: 170 MAIGFM-PGIDNMAHIGGFVAGILLGFI 196
++ GF+ GIDN HIGG + G +LGF+
Sbjct: 190 LSYGFLVSGIDNAGHIGGALTGAMLGFV 217
>gi|195375397|ref|XP_002046488.1| rho [Drosophila virilis]
gi|194153646|gb|EDW68830.1| rho [Drosophila virilis]
Length = 401
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 20/156 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+++RFFS M+LHAN HL N + LF GV LE G RIG++Y+ F G L + +
Sbjct: 192 QVWRFFSYMFLHANWFHLGFNIIIQLFFGVPLEVMHGTARIGVIYLAGVFAGSLGTSVVD 251
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM------- 170
E VGASG ++ LL A L+ I N+ + + +I+ + ++
Sbjct: 252 SEV-----FLVGASGGVYALLAAHLANITLNYAHMKSASTQLGSVIIFVSCDLGYAVYTQ 306
Query: 171 --------AIGFMPGIDNMAHIGGFVAGILLGFILL 198
A P + +AH+ G +AG+ +GF++L
Sbjct: 307 YFDGAATPAFAKGPQVSYIAHLTGALAGLTIGFLVL 342
>gi|117927224|ref|YP_871775.1| rhomboid family protein [Acidothermus cellulolyticus 11B]
gi|117647687|gb|ABK51789.1| Rhomboid family protein [Acidothermus cellulolyticus 11B]
Length = 287
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 71/138 (51%), Gaps = 12/138 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V GE YR + M+LHA+V+H++ N A+L +G LE G LR +LY L+G GG
Sbjct: 118 VAGGEFYRLITAMFLHASVLHIVFNMWALLVVGAPLEALLGRLRFLVLYFLAGLGGSTAV 177
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L TL GASGA+FGL A + I + LVI +N+A+
Sbjct: 178 YLFAPRGSATL----GASGAIFGLFAAL-------FVFGRRLNFDIRPIGLVIVINLALT 226
Query: 174 F-MPGIDNMAHIGGFVAG 190
F + G+ HIGG ++G
Sbjct: 227 FVLSGVSWQGHIGGLLSG 244
>gi|207738893|ref|YP_002257286.1| membrane protein [Ralstonia solanacearum IPO1609]
gi|206592264|emb|CAQ59170.1| membrane protein [Ralstonia solanacearum IPO1609]
Length = 543
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V GE +R S +LHA V+HL N + + G+ +E +G L+Y+ +G G LS
Sbjct: 222 VQHGEWWRLLSATFLHAGVLHLAINMVGLYATGIAVERIYGPAAYLLIYLGAGLLGSALS 281
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVS--ITMLILVIGVNMA 171
+ I VGASGA+FG+ GA L I L +T L L + ++A
Sbjct: 282 LSFAAQH----AIGVGASGAVFGVAGAWLVAIGRYRGLMPQTLSKRLLTQLGLFVLYSLA 337
Query: 172 IGFM-PGIDNMAHIGGFVAGILLGFILLLR 200
G PG+DN AHIGG V G +L IL R
Sbjct: 338 QGLTKPGVDNAAHIGGLVGGCMLAMILPAR 367
>gi|29568120|gb|AAO61491.1| C16orf8-like protein [Takifugu rubripes]
Length = 855
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 56 DGEIYRFFSCMWL----HANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGL 111
+ E+ FS +WL HA ++H L + + + +E+ G+LR+ ++Y+LSG G L
Sbjct: 646 NPEVPDQFSRLWLSLFLHAGILHCLVSVFFQMTVLRDIEKLAGWLRVSIIYMLSGITGNL 705
Query: 112 LSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMA 171
S + + VG +G FG+L E+ NW + L+ + +
Sbjct: 706 ASSIFL-----PYRAEVGPAGNQFGILACLKEELFQNWQNLERPWRAFGKLLAISTFLFS 760
Query: 172 IGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
G +P IDN HI GFV+G L F L PYI+ G ++K
Sbjct: 761 FGLLPWIDNFGHICGFVSGFFLSFTFL----------PYISFGRSDMYRK 800
>gi|294813767|ref|ZP_06772410.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
gi|326442188|ref|ZP_08216922.1| hypothetical protein SclaA2_14039 [Streptomyces clavuligerus ATCC
27064]
gi|294326366|gb|EFG08009.1| Putative membrane protein [Streptomyces clavuligerus ATCC 27064]
Length = 301
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 82/151 (54%), Gaps = 13/151 (8%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
V +D + YR + ++LH + H+L N L + F+G +E G R LY+LSG GG L
Sbjct: 133 VAHD-QWYRLLTAVFLHQELSHILFNLLGLWFLGRMVEPALGRRRFLALYLLSGLGGSTL 191
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAI 172
+ L + +Q +L GASGA+FGL+GA + L + + ++L++GV++ +
Sbjct: 192 AYLVAEPNQPSL----GASGAIFGLMGAFV-------VLARRVQLDMRPVVLILGVSLVL 240
Query: 173 GFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
F P I HIGG V G ++ ++ P+
Sbjct: 241 TFTRPDISWEGHIGGLVTGAVIAAGMVYAPR 271
>gi|10879|emb|CAA36692.1| rho [Drosophila melanogaster]
Length = 355
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+++RFFS M+LHAN HL N + LF G+ LE G RIG++Y+ F G L + +
Sbjct: 149 QVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVD 208
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM------- 170
E VGASG ++ LL A L+ I N+ + + +++ + ++
Sbjct: 209 SEV-----FLVGASGGVYALLAAHLANITLNYAHMKSASTQLGSVVIFVSCDLGYALYTQ 263
Query: 171 -----AIGFMPGIDNMAHIGGFVAGILLGFILL 198
A P + +AH+ G +AG+ +GF++L
Sbjct: 264 YFDGSAFAKGPQVSYIAHLTGALAGLTIGFLVL 296
>gi|289434618|ref|YP_003464490.1| rhomboid family membrane protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
gi|289170862|emb|CBH27404.1| rhomboid family membrane protein [Listeria seeligeri serovar 1/2b
str. SLCC3954]
Length = 509
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 83/154 (53%), Gaps = 9/154 (5%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
N ++Y GE +RF S ++LH+ +IHL +N++ + +G E +G R L+ ++ G G
Sbjct: 219 NPLIYAGEWWRFISPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYTLILIIGGICGN 278
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
+ S + +S+GAS A+F ++GA L ++ +Y K + +++ LV VN+
Sbjct: 279 IASF------ALNMNLSIGASTAVFAVMGALLYLVVLKPNVYA-KTIGVSIASLV-AVNL 330
Query: 171 AIG-FMPGIDNMAHIGGFVAGILLGFILLLRPQY 203
+ F ID HIGG V G LL L L Q+
Sbjct: 331 LLDVFSSQIDIAGHIGGLVGGFLLAGALSLPNQF 364
>gi|422022178|ref|ZP_16368686.1| hypothetical protein OO7_06384 [Providencia sneebia DSM 19967]
gi|414096671|gb|EKT58327.1| hypothetical protein OO7_06384 [Providencia sneebia DSM 19967]
Length = 287
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 86/161 (53%), Gaps = 19/161 (11%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC-- 114
G+ +R+ M LH+N +HL NSLA+ IG++ E ++G ++ +Y +SG G L S
Sbjct: 69 GDWWRYPISMLLHSNGVHLAFNSLALFVIGIECERNYGKSKLLAIYFISGIGAALFSAYW 128
Query: 115 -LHQDESQQTL-------QISVGASGALFGLLGAS---LSEIIT----NWTLYTNKCVSI 159
++D + TL + VGASGA+ GL AS L + I N T++ + +
Sbjct: 129 QYYEDINDPTLTDNMVYITVGVGASGAIMGLAAASVIYLYQAIRVPNINPTIHAQQKRLL 188
Query: 160 TMLILVIGVNMAIGFMPGIDNMAHIGGFVAGIL--LGFILL 198
++ +I + + G G+DN AHIGG G L LG+I +
Sbjct: 189 YNILGMIVLTLISGLQAGVDNAAHIGGASIGALISLGYIFI 229
>gi|410902671|ref|XP_003964817.1| PREDICTED: inactive rhomboid protein 1-like [Takifugu rubripes]
Length = 858
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 15/157 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + I LE+ G+LRI ++Y++SG G L S +
Sbjct: 655 QFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYIISGITGNLASAIFL 714
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + T L+ V+ A G +P
Sbjct: 715 -----PYRAEVGPAGSQFGILACLFVELFQSWQILAQPWRAFTKLLCVVLFLFAFGLLPW 769
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG 214
IDN AHI GF++G L F L PYI+ G
Sbjct: 770 IDNFAHISGFISGFFLSFAFL----------PYISFG 796
>gi|89099491|ref|ZP_01172367.1| hypothetical protein B14911_19975 [Bacillus sp. NRRL B-14911]
gi|89085877|gb|EAR65002.1| hypothetical protein B14911_19975 [Bacillus sp. NRRL B-14911]
Length = 196
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 7/164 (4%)
Query: 37 PSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFL 96
P++ ++L G+ NL + +GE++R + +++H+ H+L NS +++ G LE G
Sbjct: 38 PNSYIFERLAGV--NLFIREGEVWRLATPIFMHSGFTHVLFNSFSLVLFGPALERIAGKA 95
Query: 97 RIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKC 156
+ +Y+++G + + L + + VG+SGA+FGL G + L + +
Sbjct: 96 KFAGIYLITGISANVATLLLEPLTYT----HVGSSGAIFGLFGFFAAVAYFRKDLMSREN 151
Query: 157 VSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLR 200
I + I VIG+ M P I+ AHI GF++G L+G + L R
Sbjct: 152 SQIIITIAVIGLIMTF-IQPNINISAHIFGFISGFLIGALSLKR 194
>gi|357019099|ref|ZP_09081357.1| rhomboid family protein [Mycobacterium thermoresistibile ATCC
19527]
gi|356481160|gb|EHI14270.1| rhomboid family protein [Mycobacterium thermoresistibile ATCC
19527]
Length = 281
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 14/141 (9%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V GE YR + +LH ++HLL N A+ IG LE G LR GLLY LS GG +L
Sbjct: 108 VAAGEYYRLVTSAFLHFGLMHLLFNMFALYVIGGPLEAALGRLRFGLLYALSALGGSVLV 167
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L + + GASGA+FGL A+ + + + + + +I VN+ I
Sbjct: 168 YL------LAMNPTAGASGAVFGLFAAT-------YVVAKRLNLDVRFVTGLIVVNLVIT 214
Query: 174 F-MPGIDNMAHIGGFVAGILL 193
F +PGI H+GG + G L+
Sbjct: 215 FVVPGISWQGHLGGLLTGALV 235
>gi|255319136|ref|ZP_05360354.1| peptidase, S54 family [Acinetobacter radioresistens SK82]
gi|262379268|ref|ZP_06072424.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
gi|255303782|gb|EET82981.1| peptidase, S54 family [Acinetobacter radioresistens SK82]
gi|262298725|gb|EEY86638.1| conserved hypothetical protein [Acinetobacter radioresistens SH164]
Length = 268
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/156 (36%), Positives = 84/156 (53%), Gaps = 13/156 (8%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
+ Y E R F+ M+ H +IHL+ N A+ G E+ FG LYVL+G G LL
Sbjct: 58 LTYLEEPQRLFTSMFFHFGLIHLMLNMWALYIFGSVAEQLFGRSYFIGLYVLAGLMGSLL 117
Query: 113 ----------SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV-SITM 161
S L+Q + + ++ GASGA+ G LGA+L+ + L + +
Sbjct: 118 SGYIDVQNTYSLLNQFDPELLPRVGAGASGAVMG-LGAALAILSLLPVLPRQQFILDRKS 176
Query: 162 LILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFI 196
L+LV+G+N+ +GFM GI+N AHIGG + GILL +
Sbjct: 177 LLLVMGLNLGMGFMISGINNAAHIGGMMMGILLALL 212
>gi|24655197|ref|NP_523883.2| rhomboid, isoform A [Drosophila melanogaster]
gi|442629406|ref|NP_001261255.1| rhomboid, isoform B [Drosophila melanogaster]
gi|20141697|sp|P20350.2|RHOM_DROME RecName: Full=Protein rhomboid; AltName: Full=Protein veinlet
gi|7292083|gb|AAF47496.1| rhomboid, isoform A [Drosophila melanogaster]
gi|21464330|gb|AAM51968.1| LD06131p [Drosophila melanogaster]
gi|220943014|gb|ACL84050.1| rho-PA [synthetic construct]
gi|220953098|gb|ACL89092.1| rho-PA [synthetic construct]
gi|440215122|gb|AGB93950.1| rhomboid, isoform B [Drosophila melanogaster]
Length = 355
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+++RFFS M+LHAN HL N + LF G+ LE G RIG++Y+ F G L + +
Sbjct: 149 QVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVD 208
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM------- 170
E VGASG ++ LL A L+ I N+ + + +++ + ++
Sbjct: 209 SEV-----FLVGASGGVYALLAAHLANITLNYAHMKSASTQLGSVVIFVSCDLGYALYTQ 263
Query: 171 -----AIGFMPGIDNMAHIGGFVAGILLGFILL 198
A P + +AH+ G +AG+ +GF++L
Sbjct: 264 YFDGSAFAKGPQVSYIAHLTGALAGLTIGFLVL 296
>gi|340724954|ref|XP_003400842.1| PREDICTED: hypothetical protein LOC100644578 [Bombus terrestris]
Length = 1834
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 23/185 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR F+ M+LHA V+HL + F+ LE+ G LRI L+Y + G L S +
Sbjct: 1627 QFYRLFTTMFLHAGVLHLSITLMVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 1686
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +GA F LL + E++ W + + ++ LI V+ + +G +P
Sbjct: 1687 -----PYRAEVGPAGAHFALLATLIVEVLHCWPMLKHPRRVLSKLIFVLLGLLILGMLPW 1741
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWV--IS 235
+DN AH+ GF+ G L + L+ P+I+ G+ +K L+W+ I
Sbjct: 1742 VDNYAHLFGFIFGFLAAYALM----------PFISFGHYDRRRKI------WLIWICLIL 1785
Query: 236 VVVLF 240
+VVLF
Sbjct: 1786 IVVLF 1790
>gi|255533925|ref|YP_003094297.1| rhomboid family protein [Pedobacter heparinus DSM 2366]
gi|255346909|gb|ACU06235.1| Rhomboid family protein [Pedobacter heparinus DSM 2366]
Length = 513
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 82/150 (54%), Gaps = 7/150 (4%)
Query: 49 SRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFG 108
SR+L + G+ +R S + H +++HL N A+++IG+ E G+ + ++Y+LSG
Sbjct: 210 SRDLTL-SGQWWRLLSSQFYHFSLLHLFFNMYALIYIGLMTENKLGWAKTLIVYILSGTC 268
Query: 109 GGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGV 168
G LLS + GASGA+ G+ GA L+ +++N T + ++V+
Sbjct: 269 GALLSVYG-----HKIGFMGGASGAIMGMFGAFLALLLSNAFEKTAARALLISTVIVVAY 323
Query: 169 NMAIGFMPGI-DNMAHIGGFVAGILLGFIL 197
+ G + DN AH+GG V+G L+G++L
Sbjct: 324 MLLNGLLSETADNSAHLGGLVSGFLIGYLL 353
>gi|421896459|ref|ZP_16326856.1| membrane protein [Ralstonia solanacearum MolK2]
gi|206587624|emb|CAQ18206.1| membrane protein [Ralstonia solanacearum MolK2]
Length = 458
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 75/150 (50%), Gaps = 7/150 (4%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V GE +R S +LHA V+HL N + + G+ +E +G L+Y+ +G G LS
Sbjct: 137 VQHGEWWRLLSATFLHAGVLHLAINMVGLYATGITVERIYGPAAYLLIYLGAGLLGSALS 196
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVS--ITMLILVIGVNMA 171
+ I VGASGA+FG+ GA L I L +T L L + ++A
Sbjct: 197 LSFAAQH----AIGVGASGAVFGVAGAWLVAIGRYRGLMPQTLSKRLLTQLGLFVLYSLA 252
Query: 172 IGFM-PGIDNMAHIGGFVAGILLGFILLLR 200
G PG+DN AHIGG V G +L IL R
Sbjct: 253 QGLTKPGVDNAAHIGGLVGGCVLAMILPAR 282
>gi|415722834|ref|ZP_11469227.1| rhomboid family membrane protein [Gardnerella vaginalis
00703C2mash]
gi|388064306|gb|EIK86863.1| rhomboid family membrane protein [Gardnerella vaginalis
00703C2mash]
Length = 233
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 89/175 (50%), Gaps = 24/175 (13%)
Query: 25 SFQPRSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHA-NVIHLLTNSLAIL 83
++Q EN+ F P T + +F+ M++HA + H+L N + +
Sbjct: 45 AYQLFVENTAFAPFLITKAS---------------WTWFTSMFVHAPELTHILFNMICLY 89
Query: 84 FIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLS 143
+GV+LE FG + LY +SG GG + + L+ +Q + + GASGA+ GL+GA L
Sbjct: 90 SLGVELERFFGKWKFFFLYAISGLGGCVATLLYSKLTQDWVIAAYGASGAIMGLIGALL- 148
Query: 144 EIITNWTLYTNKCVSITMLILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFIL 197
+ W L S+ ++ IG+ +A+ + P I AHIGG V GI+L +L
Sbjct: 149 --VAQWRLGE----SVNGTLIWIGLTLAMPLLVPNIAWQAHIGGIVTGIVLSALL 197
>gi|284028038|ref|YP_003377969.1| Rhomboid family protein [Kribbella flavida DSM 17836]
gi|283807331|gb|ADB29170.1| Rhomboid family protein [Kribbella flavida DSM 17836]
Length = 246
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 12/152 (7%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
V+ D E +R F+ + H + H+ +N + +G LE+ G LR LLY LS GG +
Sbjct: 99 VLVDSEPWRLFTSAFTHLQIFHIFSNLFMLYQVGPLLEQMLGRLRFVLLYFLSALGGSIA 158
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAI 172
L + TL GASGA+ GL+GA L + + + +T ++ + + I
Sbjct: 159 VWLLANPVSSTL----GASGAVLGLVGALL-------VISRARGMDVTWILAYVAITAVI 207
Query: 173 GFM-PGIDNMAHIGGFVAGILLGFILLLRPQY 203
F+ P I H+GGF+AG + ++ L ++
Sbjct: 208 SFLFPNISWQGHLGGFLAGAAIAWLFLRETKW 239
>gi|297200957|ref|ZP_06918354.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
gi|197712264|gb|EDY56298.1| conserved hypothetical protein [Streptomyces sviceus ATCC 29083]
Length = 294
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 12/150 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V DG+ YR + M+ H + H+ N +++ ++G LE G R +Y +SG GG L+
Sbjct: 126 VADGQYYRLVTSMFAHQEIWHIGFNMMSLWWLGGPLEAALGRARYLTVYFVSGLAGGALA 185
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L S TL GASGA+FGL GA+ L + +I ++ +N+
Sbjct: 186 YLLASPSTATL----GASGAIFGLFGATA-------VLMRRLNYDLRPIIALLVINLIFT 234
Query: 174 FM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
F GI AHIGG VAG++ G+ ++ P+
Sbjct: 235 FSWSGISWQAHIGGLVAGLITGYGMVHAPR 264
>gi|385989630|ref|YP_005907928.1| integral membrane protein [Mycobacterium tuberculosis CCDC5180]
gi|385993221|ref|YP_005911519.1| integral membrane protein [Mycobacterium tuberculosis CCDC5079]
gi|424945902|ref|ZP_18361598.1| integral membrane protein [Mycobacterium tuberculosis NCGM2209]
gi|449062098|ref|YP_007429181.1| integral membrane protein [Mycobacterium bovis BCG str. Korea
1168P]
gi|339293175|gb|AEJ45286.1| integral membrane protein [Mycobacterium tuberculosis CCDC5079]
gi|339296823|gb|AEJ48933.1| integral membrane protein [Mycobacterium tuberculosis CCDC5180]
gi|358230417|dbj|GAA43909.1| integral membrane protein [Mycobacterium tuberculosis NCGM2209]
gi|379026212|dbj|BAL63945.1| integral membrane protein [Mycobacterium tuberculosis str. Erdman =
ATCC 35801]
gi|449030606|gb|AGE66033.1| integral membrane protein [Mycobacterium bovis BCG str. Korea
1168P]
Length = 212
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 17/162 (10%)
Query: 47 GLSRNLVVY-----DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLL 101
GL R L ++ G+ YR + +LH +HLL N A+ +G LE G LR G L
Sbjct: 22 GLERQLALWPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGAL 81
Query: 102 YVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM 161
Y +S GG +L L + T GASGA+FGL GA+ + + +
Sbjct: 82 YAVSALGGSVLVYLIAPLNTAT----AGASGAVFGLFGATF-------MVARRLHLDVRW 130
Query: 162 LILVIGVNMAIGFM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
++ +I +N+A F+ P I H+GG V G L+ + P+
Sbjct: 131 VVALIVINLAFTFLAPAISWQGHVGGLVTGALVAATYVYAPR 172
>gi|195586929|ref|XP_002083220.1| GD13619 [Drosophila simulans]
gi|194195229|gb|EDX08805.1| GD13619 [Drosophila simulans]
Length = 355
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+++RFFS M+LHAN HL N + LF G+ LE G RIG++Y+ F G L + +
Sbjct: 149 QVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVD 208
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM------- 170
E VGASG ++ LL A L+ I N+ + + +++ + ++
Sbjct: 209 SEV-----FLVGASGGVYALLAAHLANITLNYAHMKSASTQLGSVVIFVSCDLGYALYTQ 263
Query: 171 -----AIGFMPGIDNMAHIGGFVAGILLGFILL 198
A P + +AH+ G +AG+ +GF++L
Sbjct: 264 YFDGSAFAKGPQVSYIAHLTGALAGLTIGFLVL 296
>gi|195490405|ref|XP_002093126.1| GE21154 [Drosophila yakuba]
gi|194179227|gb|EDW92838.1| GE21154 [Drosophila yakuba]
Length = 355
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+++RFFS M+LHAN HL N + LF G+ LE G RIG++Y+ F G L + +
Sbjct: 149 QVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVD 208
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM------- 170
E VGASG ++ LL A L+ I N+ + + +++ + ++
Sbjct: 209 SEV-----FLVGASGGVYALLAAHLANITLNYAHMKSASTQLGSVVIFVSCDLGYALYTQ 263
Query: 171 -----AIGFMPGIDNMAHIGGFVAGILLGFILL 198
A P + +AH+ G +AG+ +GF++L
Sbjct: 264 YFDGSAFAKGPQVSYIAHLTGALAGLTIGFLVL 296
>gi|28201137|dbj|BAC56701.1| rhomboid [Drosophila virilis]
Length = 404
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 78/156 (50%), Gaps = 20/156 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+++RFFS M+LHAN HL N + LF GV LE G RIG++Y+ F G L + +
Sbjct: 195 QVWRFFSYMFLHANWFHLGFNIIIQLFFGVPLEVMHGTARIGVIYLAGVFAGSLGTSVVD 254
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM------- 170
E VGASG ++ LL A L+ I N+ + + +++ + ++
Sbjct: 255 SEV-----FLVGASGGVYALLAAHLANITLNYAHMKSASTQLGSVVIFVSCDLGYAVYTQ 309
Query: 171 --------AIGFMPGIDNMAHIGGFVAGILLGFILL 198
A P + +AH+ G +AG+ +GF++L
Sbjct: 310 YFDGAATPAFAKGPQVSYIAHLTGALAGLTIGFLVL 345
>gi|194864847|ref|XP_001971137.1| GG14792 [Drosophila erecta]
gi|190652920|gb|EDV50163.1| GG14792 [Drosophila erecta]
Length = 353
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 21/155 (13%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+++RFFS M+LHAN HL N + LF G+ LE G RIG++Y+ F G L + +
Sbjct: 147 QVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVD 206
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM-- 175
E VGASG ++ LL A L+ I N+ K S + +VI V+ +G+
Sbjct: 207 SEV-----FLVGASGGVYALLAAHLANITLNYA--HMKSASTQLGSVVIFVSCDLGYALY 259
Query: 176 ------------PGIDNMAHIGGFVAGILLGFILL 198
P + +AH+ G +AG+ +GF++L
Sbjct: 260 TQYFDGSAFTKGPQVSYIAHLTGALAGLTIGFLVL 294
>gi|393199141|ref|YP_006460983.1| membrane protein [Solibacillus silvestris StLB046]
gi|406666244|ref|ZP_11074012.1| Rhomboid protease gluP [Bacillus isronensis B3W22]
gi|327438472|dbj|BAK14837.1| uncharacterized membrane protein [Solibacillus silvestris StLB046]
gi|405385783|gb|EKB45214.1| Rhomboid protease gluP [Bacillus isronensis B3W22]
Length = 207
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 80/151 (52%), Gaps = 6/151 (3%)
Query: 46 GGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
G+S N ++ GE +R + M+LHA +H+L N ++ G +LE+ G +R +Y L+
Sbjct: 44 AGMSVNGLIAAGEWWRIITSMFLHAGFMHVLFNMFSLFLFGPELEKIAGKMRFLTIYFLA 103
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G G + QD SVGASGAL+G+ GA + + L+ + I + ++V
Sbjct: 104 GIFGVAATYATQDAYYA----SVGASGALYGIFGAFGALVYYTRHLFP-QLRQIILPLIV 158
Query: 166 IGVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
I + M P I+ AH+GG V G +LG +
Sbjct: 159 ISIIMTF-LTPNINIAAHLGGLVTGFILGVV 188
>gi|353234818|emb|CCA66839.1| related to membrane protein [Piriformospora indica DSM 11827]
Length = 577
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 75/143 (52%), Gaps = 12/143 (8%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF + ++LHA +IH L N A + ++E + G + +LY G G +L
Sbjct: 370 FRFITPIFLHAGIIHFLLNMFAQWVLSGQVEREMGSIGFFILYFACGVFGNILG----GN 425
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVS----ITMLILVIGVNMAIGFM 175
Q SVGASGA+ G L ++I +W + I L+LV+G +G++
Sbjct: 426 FALVGQPSVGASGAIVGTLAVLWVDLIAHWGIEYKPVQKLIGHIINLVLVVG----MGYI 481
Query: 176 PGIDNMAHIGGFVAGILLGFILL 198
PG+DN +H+GG + G++ G ILL
Sbjct: 482 PGVDNFSHLGGLLMGLITGIILL 504
>gi|167525860|ref|XP_001747264.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774099|gb|EDQ87731.1| predicted protein [Monosiga brevicollis MX1]
Length = 511
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 5/139 (3%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
YR + + L I+LL + L+I V +E+ G+ R G+L + SG GG ++S +
Sbjct: 311 YRLITTLVLPPGTIYLLAVLVGQLYISVPIEQSIGWKRFGVLALSSGVGGYIISGIFV-- 368
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGID 179
+I G S L+G LGA E+ +W + L+L+ + A+G + ID
Sbjct: 369 ---PYEIKSGISPVLYGCLGALYIELFQSWKRVLRPARYLLWLVLITALAFAVGTLKYID 425
Query: 180 NMAHIGGFVAGILLGFILL 198
N H+GGFV G++ I+L
Sbjct: 426 NFGHVGGFVFGVVTALIVL 444
>gi|413920157|gb|AFW60089.1| hypothetical protein ZEAMMB73_222778 [Zea mays]
Length = 194
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 50/66 (75%)
Query: 142 LSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRP 201
LSE+ITNW+LY NK ++ L+LVI N+A+G +P +DN AHIGG V+G LLGF++ +RP
Sbjct: 2 LSELITNWSLYANKVAALLTLLLVILSNLALGLLPRVDNFAHIGGLVSGFLLGFVVFVRP 61
Query: 202 QYGYVS 207
+++
Sbjct: 62 HLDWLT 67
>gi|195032266|ref|XP_001988467.1| GH11182 [Drosophila grimshawi]
gi|193904467|gb|EDW03334.1| GH11182 [Drosophila grimshawi]
Length = 229
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 14/152 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E +RFF+ M LHA+ HL N FIGV LE + G R+G++YV G G L + Q
Sbjct: 82 EYWRFFTYMLLHADHWHLWINICLQCFIGVWLELEQGHWRVGVVYVAGGICGALANAWLQ 141
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM-- 175
+ +GAS ++ LL + + ++ N++ +++ + I L++++ N+A
Sbjct: 142 PKLS-----LLGASAGVYALLCSHVPHLVLNFSQLSHRFIRIAALLILLVSNVAYTAFHF 196
Query: 176 -------PGIDNMAHIGGFVAGILLGFILLLR 200
P I AH+GG AG+L+GF++ R
Sbjct: 197 CINHNRDPRISLEAHLGGGAAGVLIGFLVYRR 228
>gi|337749843|ref|YP_004644005.1| hypothetical protein KNP414_05611 [Paenibacillus mucilaginosus
KNP414]
gi|336301032|gb|AEI44135.1| hypothetical protein KNP414_05611 [Paenibacillus mucilaginosus
KNP414]
Length = 383
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 11/139 (7%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N + GE +R+ + ++LH +HL NS A+L +G +LE G LR L Y+L+G
Sbjct: 229 GAKYNPYIDRGEYWRWITPIFLHIGGLHLWFNSTALLSLGGRLERGIGSLRFALFYLLAG 288
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL-V 165
G + S IS GASGA+FGL+G L I + L+ S M I
Sbjct: 289 IAGNIASYTFSP------SISAGASGAIFGLMGVLLVLSIMDPDLWGE---SGGMAIWGG 339
Query: 166 IGVNMAIGFM-PGIDNMAH 183
+G+N+ +GF+ PGIDN AH
Sbjct: 340 LGMNVVLGFIVPGIDNYAH 358
>gi|23099378|ref|NP_692844.1| hypothetical protein OB1923 [Oceanobacillus iheyensis HTE831]
gi|22777607|dbj|BAC13879.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 518
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 74/141 (52%), Gaps = 15/141 (10%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ +GE +R + M+LH +H+L N +A+ ++G +E FG R ++Y L G
Sbjct: 218 GAKYNPLIMEGEWWRLLTSMFLHIGFVHILMNMVALFYLGTAVERIFGRTRFLVIYFLGG 277
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITM---LI 163
G + S ++ IS GASGA+FGL GA L + L TM ++
Sbjct: 278 IAGSIASF------ATSISISAGASGAIFGLFGALLF-----FGLIYKDVFKDTMGMNIV 326
Query: 164 LVIGVNMAIGF-MPGIDNMAH 183
++ VN+ IGF +P ID AH
Sbjct: 327 FILVVNLVIGFSIPEIDMGAH 347
>gi|379722713|ref|YP_005314844.1| hypothetical protein PM3016_4963 [Paenibacillus mucilaginosus 3016]
gi|378571385|gb|AFC31695.1| hypothetical protein PM3016_4963 [Paenibacillus mucilaginosus 3016]
Length = 383
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/139 (38%), Positives = 75/139 (53%), Gaps = 11/139 (7%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N + GE +R+ + ++LH +HL NS A+L +G +LE G LR L Y+L+G
Sbjct: 229 GAKYNPYIDRGEYWRWITPIFLHIGGLHLWFNSTALLSLGGRLERGIGSLRFALFYLLAG 288
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLIL-V 165
G + S IS GASGA+FGL+G L I + L+ S M I
Sbjct: 289 IAGNIASYTFSP------SISAGASGAIFGLMGVLLVLSIMDPDLWGE---SGGMAIWGG 339
Query: 166 IGVNMAIGFM-PGIDNMAH 183
+G+N+ +GF+ PGIDN AH
Sbjct: 340 LGMNVVLGFIVPGIDNYAH 358
>gi|410452631|ref|ZP_11306595.1| hypothetical protein BABA_02602 [Bacillus bataviensis LMG 21833]
gi|409934113|gb|EKN71029.1| hypothetical protein BABA_02602 [Bacillus bataviensis LMG 21833]
Length = 193
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 79/145 (54%), Gaps = 5/145 (3%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
NL + +GE++R + ++H+ H+L NS +++ G LE G R +Y+LSG
Sbjct: 50 NLYIMEGEVWRLITPTFMHSGFAHMLFNSFSLVLFGPALERMLGGGRFLFVYLLSGLIAN 109
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
+ + L + + VG+SGA+FGL G ++ II + + + I +++ V+ + M
Sbjct: 110 VATLLLEPLTYT----HVGSSGAIFGLFGYYIAIIIFRKHMLSKQNSQIILVLCVVSLIM 165
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGF 195
F P I+ AH+ G ++G LLGF
Sbjct: 166 TF-FQPNINITAHLFGLISGFLLGF 189
>gi|170593681|ref|XP_001901592.1| Rhomboid family protein [Brugia malayi]
gi|158590536|gb|EDP29151.1| Rhomboid family protein [Brugia malayi]
Length = 1013
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 60 YRFFSCMWLHANVIH-LLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQD 118
YR F ++LHA +IH +LT + IL++ LE+ G+ RI LLY++SG GG L +
Sbjct: 808 YRLFIPLFLHAGIIHCILTIFIQILYMR-DLEKLLGWARIALLYMVSGVGGYLAGAIFV- 865
Query: 119 ESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI 178
+ VG +G+ G+ A +++ +W L ++ L L IG +P +
Sbjct: 866 ----PYRPEVGPAGSHVGMFAAMYVDVLYSWNLLERPWHAVVQLSLFTLALFTIGTLPWV 921
Query: 179 DNMAHIGGFVAGILLGFILL 198
DN AH+ GF+ GIL+ +L
Sbjct: 922 DNWAHLFGFIFGILISLAVL 941
>gi|344175988|emb|CCA87141.1| putative rhomboid protease [Ralstonia syzygii R24]
Length = 543
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 80/165 (48%), Gaps = 18/165 (10%)
Query: 44 KLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYV 103
KLGG + V GE +R S +LHA V+HL+ N + + G+ +E +G L+Y+
Sbjct: 213 KLGG-NAAFEVQHGEWWRLLSATFLHAGVLHLVINVIGLYATGIAVERIYGPAAYLLIYL 271
Query: 104 LSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIIT-----NWTLYTNKCVS 158
+G G LS + I VGASGA+FG+ GA L I TL
Sbjct: 272 GAGLLGSALSLSFAAQH----AIGVGASGAVFGVAGAWLVAICRYRGQMPATLSKRLLTQ 327
Query: 159 ITMLI---LVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLR 200
+ M + LV G+ PG+DN AHIGG V G +L IL R
Sbjct: 328 LGMFVLYSLVQGLT-----KPGVDNAAHIGGLVGGCMLALILPAR 367
>gi|195336579|ref|XP_002034913.1| ve [Drosophila sechellia]
gi|194128006|gb|EDW50049.1| ve [Drosophila sechellia]
Length = 364
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+++RFFS M+LHAN HL N + LF G+ LE G RIG++Y+ F G L + +
Sbjct: 158 QVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVD 217
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM------- 170
E VGASG ++ LL A L+ I N+ + + +++ + ++
Sbjct: 218 SEV-----FLVGASGGVYALLAAHLANITLNYAHMKSASTQLGSVVIFVSCDLGYALYTQ 272
Query: 171 -----AIGFMPGIDNMAHIGGFVAGILLGFILL 198
A P + +AH+ G +AG+ +GF++L
Sbjct: 273 YFDGSAFAKGPQVSYIAHLTGALAGLTIGFLVL 305
>gi|449017499|dbj|BAM80901.1| unknown rhomboid family protein [Cyanidioschyzon merolae strain
10D]
Length = 458
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 14/166 (8%)
Query: 45 LGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
+ G N + GE YR F+ ++LH N +HL+ N ++ +G ++E +G R LY+L
Sbjct: 277 MAGAKVNAAIRTGEWYRLFTPLFLHGNTLHLIVNLSSLKSLGPQIEATYGHRRYAALYLL 336
Query: 105 SGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITN--WTLYTNKCVSITML 162
SG G L S SVGAS A+FGL+GA + ++N W + + +
Sbjct: 337 SGLTGNLFSFFFNTAP------SVGASSAIFGLIGAMAAFYVSNTDWFGREHSHRVLRNI 390
Query: 163 ILVIGVNMAIGFMPG--IDNMAHIGGF----VAGILLGFILLLRPQ 202
V +N+ G P IDN H+GG V G+L G L L P+
Sbjct: 391 AWVTLLNLGQGLAPASRIDNFGHLGGLLGGAVFGVLFGPRLYLDPK 436
>gi|195427519|ref|XP_002061824.1| GK16984 [Drosophila willistoni]
gi|194157909|gb|EDW72810.1| GK16984 [Drosophila willistoni]
Length = 391
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 80/156 (51%), Gaps = 22/156 (14%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+++RFFS M+LHAN HL N + LF G+ LE G RIG++Y+ F G L + +
Sbjct: 184 QVWRFFSYMFLHANWFHLGFNIIIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVD 243
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM-- 175
E VGASG ++ LL A L+ I N+ K S + +VI V+ +G+
Sbjct: 244 SEV-----FLVGASGGVYALLAAHLANITLNYAHM--KSASTQLGSVVIFVSCDLGYALY 296
Query: 176 -------------PGIDNMAHIGGFVAGILLGFILL 198
P + +AH+ G +AG+ +GF++L
Sbjct: 297 TQYFDGGATFTKGPQVSYIAHLTGALAGLTIGFLVL 332
>gi|404417227|ref|ZP_10999031.1| hypothetical protein SARL_05123 [Staphylococcus arlettae CVD059]
gi|403490425|gb|EJY95966.1| hypothetical protein SARL_05123 [Staphylococcus arlettae CVD059]
Length = 480
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 87/162 (53%), Gaps = 11/162 (6%)
Query: 38 STATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLR 97
S L +GGL VV+ GE YR S ++LH N H+L N L++ G +E G R
Sbjct: 182 SELKLLDVGGLVHFNVVH-GEWYRLISSIFLHYNFEHILMNMLSLFIFGKIVESIVGHWR 240
Query: 98 IGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCV 157
+ ++++ SG S S ISVGASGA+FGL+G SL + ++ K V
Sbjct: 241 MLVIFLFSGLFANFASL-----SFNIDTISVGASGAIFGLIG-SLFGFMYISKIFERKLV 294
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLL 199
++ LVI + +++ FM I+ AHIGGF+ G+ FI LL
Sbjct: 295 GQLLIALVILIGISL-FMDNINVWAHIGGFIGGL---FITLL 332
>gi|134112822|ref|XP_774954.1| hypothetical protein CNBF1190 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257602|gb|EAL20307.1| hypothetical protein CNBF1190 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 532
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 60 YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDE 119
+RF ++LH +IHL+ N L + + ++E + G + ++Y+L G G +L
Sbjct: 316 WRFILPIFLHVGIIHLIVNMLVQIIVSAQVEREMGTIPFLIVYMLGGIYGFVLG----GN 371
Query: 120 SQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMP-GI 178
+T SVGASGALF L +++ +W + +L L + A+G++P +
Sbjct: 372 FTRTGIPSVGASGALFATNACVLVDLVLHWKYEERPKLKAFLLFLEFVIGFAMGYIPNAV 431
Query: 179 DNMAHIGGFVAGILLGFIL 197
D +AH+GG+ GIL G IL
Sbjct: 432 DGLAHLGGWAMGILCGTIL 450
>gi|326778165|ref|ZP_08237430.1| Peptidase S54, rhomboid domain protein [Streptomyces griseus
XylebKG-1]
gi|326658498|gb|EGE43344.1| Peptidase S54, rhomboid domain protein [Streptomyces griseus
XylebKG-1]
Length = 300
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 80/150 (53%), Gaps = 12/150 (8%)
Query: 54 VYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLS 113
V +G+ YR + M+LH V+H+ N L + ++G +LE G R LY+LSG G L+
Sbjct: 132 VAEGQWYRLVTSMFLHQEVVHIAFNMLGLWWLGGQLEAALGRSRYLALYLLSGLAGSALT 191
Query: 114 CLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG 173
L +Q +L GASGA++GL GA+ L + +++++ +NM
Sbjct: 192 YLIAAPNQGSL----GASGAVYGLFGATA-------VLMRRMNYDMRPVLVLLAINMVFT 240
Query: 174 FM-PGIDNMAHIGGFVAGILLGFILLLRPQ 202
F GI AH+GG +AG+++ ++ P+
Sbjct: 241 FTWGGIAWEAHVGGLIAGVVIAVGMVHAPR 270
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.145 0.457
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,957,739,616
Number of Sequences: 23463169
Number of extensions: 165872652
Number of successful extensions: 509739
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2904
Number of HSP's successfully gapped in prelim test: 2895
Number of HSP's that attempted gapping in prelim test: 498758
Number of HSP's gapped (non-prelim): 6405
length of query: 242
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 104
effective length of database: 9,121,278,045
effective search space: 948612916680
effective search space used: 948612916680
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 75 (33.5 bits)