BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026173
(242 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q695T8|RHBL4_TOXGO Rhomboid-like protease 4 OS=Toxoplasma gondii GN=ROM4 PE=2 SV=1
Length = 641
Score = 94.4 bits (233), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 96/171 (56%), Gaps = 16/171 (9%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTN---SLAILFIG 86
+ S P+ L+ LGGL N + E +R F+ M++H +H+L N + IL+I
Sbjct: 313 AATSWDSPNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWI- 371
Query: 87 VKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEII 146
+E D+GFLR LL+ L G G LLS + S I+VG+SG+++ LLGA + +
Sbjct: 372 --IEPDWGFLRTTLLFFLGGISGNLLSAVADPCS-----ITVGSSGSMYALLGALIPYCV 424
Query: 147 TNW-TLYTNKCVSITMLILVIGVNMAI-GFMPGIDNMAHIGGFVAGILLGF 195
W ++ C+ + M++++IG+ + GF DN AH+GG + GIL GF
Sbjct: 425 EYWKSIPRPGCILVFMIVVIIGILTGMAGF---TDNYAHMGGALGGILWGF 472
>sp|C8VCL5|Y0929_EMENI Uncharacterized rhomboid protein AN10929 OS=Emericella nidulans
(strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 /
M139) GN=AN10929 PE=3 SV=1
Length = 503
Score = 90.5 bits (223), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 9/160 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ +RF M+LH+ +H+ N L + +G +E G+ R GL+Y+ SG G +L +
Sbjct: 250 QWFRFIIPMFLHSGFVHIGFNLLVQMTMGADMERMIGWWRYGLVYLSSGIWGFVLGGNYA 309
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ + S G SGALFG+L + +++ W N V + +++L I V+ +G +PG
Sbjct: 310 GQGE----ASCGCSGALFGILALFVLDLLYGWNDRQNPWVELIIMVLGIAVSFVLGLLPG 365
Query: 178 IDNMAHIGGFVAGILLGFILL-----LRPQYGYVSGPYIA 212
+DN +H+GGF G+ LG ++ LR + G PY+A
Sbjct: 366 LDNFSHLGGFTMGLALGLCVMRSPNALRERIGLARSPYVA 405
>sp|Q6GMF8|RHDF1_DANRE Inactive rhomboid protein 1 OS=Danio rerio GN=rhbdf1 PE=2 SV=1
Length = 857
Score = 90.1 bits (222), Expect = 1e-17, Method: Composition-based stats.
Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 15/157 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + I LE+ G+LRI ++Y+LSG G L S +
Sbjct: 654 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 713
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+I +W + + T L+ V+ A G +P
Sbjct: 714 -----PYRAEVGPAGSQFGILACLFVELIQSWQILAQPWRAFTKLLCVVLFLFAFGLLPW 768
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG 214
IDN AHI GF++G L F L PYI+ G
Sbjct: 769 IDNFAHISGFISGFFLSFAFL----------PYISFG 795
>sp|Q6PIX5|RHDF1_MOUSE Inactive rhomboid protein 1 OS=Mus musculus GN=Rhbdf1 PE=1 SV=2
Length = 856
Score = 83.2 bits (204), Expect = 1e-15, Method: Composition-based stats.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GFV+G+ L F L PYI+ G K+ ++K +I
Sbjct: 768 IDNFAHISGFVSGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 809
Query: 238 VLF 240
V+F
Sbjct: 810 VVF 812
>sp|Q499S9|RHDF1_RAT Inactive rhomboid protein 1 OS=Rattus norvegicus GN=Rhbdf1 PE=2
SV=1
Length = 856
Score = 82.8 bits (203), Expect = 2e-15, Method: Composition-based stats.
Identities = 51/165 (30%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ A G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AHI GFV+G+ L F L PYI+ G ++L K+
Sbjct: 768 IDNFAHISGFVSGLFLSFAFL----------PYISFGKFDLYRKR 802
>sp|Q00M95|RHDF2_CANFA Inactive rhomboid protein 2 OS=Canis familiaris GN=RHBDF2 PE=2 SV=1
Length = 827
Score = 81.6 bits (200), Expect = 5e-15, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 684 -----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPW 738
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 739 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 772
>sp|Q6PJF5|RHDF2_HUMAN Inactive rhomboid protein 2 OS=Homo sapiens GN=RHBDF2 PE=1 SV=2
Length = 856
Score = 81.3 bits (199), Expect = 6e-15, Method: Composition-based stats.
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + I LE+ G+ RI ++++LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FGLL E+ +W L + L ++ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 768 IDNIAHIFGFLSGLLLAFAFL----------PYITFGTSDKYRK 801
>sp|A7YWH9|RHDF1_BOVIN Inactive rhomboid protein 1 OS=Bos taurus GN=RHBDF1 PE=2 SV=1
Length = 856
Score = 81.3 bits (199), Expect = 6e-15, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 82/165 (49%), Gaps = 16/165 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA V+H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 653 QFYRLWLSLFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 713 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 767
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPG-YELNHKK 221
IDN AHI GF++G+ L F L PYI+ G ++L K+
Sbjct: 768 IDNFAHISGFISGLFLSFAFL----------PYISFGKFDLYRKR 802
>sp|B1MT31|RHDF1_CALMO Inactive rhomboid protein 1 OS=Callicebus moloch GN=RHBDF1 PE=3
SV=1
Length = 855
Score = 80.9 bits (198), Expect = 8e-15, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>sp|B0VX73|RHDF1_CALJA Inactive rhomboid protein 1 OS=Callithrix jacchus GN=RHBDF1 PE=3
SV=1
Length = 855
Score = 80.9 bits (198), Expect = 8e-15, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIVFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>sp|A9L8T6|RHDF1_PAPAN Inactive rhomboid protein 1 OS=Papio anubis GN=RHBDF1 PE=3 SV=1
Length = 855
Score = 80.5 bits (197), Expect = 9e-15, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>sp|Q96CC6|RHDF1_HUMAN Inactive rhomboid protein 1 OS=Homo sapiens GN=RHBDF1 PE=1 SV=2
Length = 855
Score = 80.5 bits (197), Expect = 9e-15, Method: Composition-based stats.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 23/183 (12%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+ YR + ++LHA ++H L + + + LE+ G+ RI ++Y+LSG G L S +
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPG 177
+ VG +G+ FG+L E+ +W + + L+ V+ G +P
Sbjct: 712 -----PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPW 766
Query: 178 IDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKKPKYQCHQKLLWVISVV 237
IDN AHI GF++G+ L F L PYI+ G K+ ++K +I
Sbjct: 767 IDNFAHISGFISGLFLSFAFL----------PYISFG--------KFDLYRKRCQIIIFQ 808
Query: 238 VLF 240
V+F
Sbjct: 809 VVF 811
>sp|A0JPA1|RHDF2_XENTR Inactive rhomboid protein 2 OS=Xenopus tropicalis GN=rhbdf2 PE=2
SV=1
Length = 826
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 76/144 (52%), Gaps = 5/144 (3%)
Query: 55 YDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
Y + YR + ++LHA VIH + + + + LE+ G+LRI ++Y+LSG G L S
Sbjct: 620 YPDQFYRLWLSLFLHAGVIHCCVSVVFQMTVLRDLEKLAGWLRISIIYILSGITGNLASA 679
Query: 115 LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF 174
L + VG +G+ FGLL E+ +W + + L+ ++ G
Sbjct: 680 LFL-----PYRAEVGPAGSQFGLLACLFVELFQSWQILAKPWKAFLKLLGIVLFLFLFGL 734
Query: 175 MPGIDNMAHIGGFVAGILLGFILL 198
+P IDN+AHI GF++G+LL F L
Sbjct: 735 LPWIDNIAHIFGFLSGLLLSFSFL 758
>sp|Q80WQ6|RHDF2_MOUSE Inactive rhomboid protein 2 OS=Mus musculus GN=Rhbdf2 PE=1 SV=1
Length = 827
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
N V D + YR + ++LHA ++H L + + + I LE+ G+ RI ++++LSG G
Sbjct: 618 NPEVPD-QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGN 676
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
L S + + VG +G+ FGLL E+ +W L + L ++
Sbjct: 677 LASAIFL-----PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLF 731
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGYVSGPYIAPGYELNHKK 221
G +P IDN+AHI GF++G+LL F L PYI G ++K
Sbjct: 732 ICGLLPWIDNIAHIFGFLSGMLLAFAFL----------PYITFGTSDKYRK 772
>sp|P46116|AARA_PROST Rhomboid protease AarA OS=Providencia stuartii GN=aarA PE=1 SV=1
Length = 281
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 18/164 (10%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
G+ +R+ M LH+N HL N LA+ IG+ E +G ++ +Y++SG G L S
Sbjct: 66 GDWWRYPISMMLHSNGTHLAFNCLALFVIGIGCERAYGKFKLLAIYIISGIGAALFSAYW 125
Query: 117 Q----------DESQQTLQISVGASGALFGLLGAS---LSEIITNW-----TLYTNKCVS 158
Q +S + I VGASGA+ G+ AS L +++ N + +
Sbjct: 126 QYYEISNSDLWTDSTVYITIGVGASGAIMGIAAASVIYLIKVVINKPNPHPVIQRRQKYQ 185
Query: 159 ITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFILLLRPQ 202
+ LI +I + + G G+DN AHIGG + G L+ +L P
Sbjct: 186 LYNLIAMIALTLINGLQSGVDNAAHIGGAIIGALISIAYILVPH 229
>sp|Q6IUY1|RHBL3_TOXGO Rhomboid-like protease 3 OS=Toxoplasma gondii GN=ROM3 PE=2 SV=1
Length = 263
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 87/161 (54%), Gaps = 8/161 (4%)
Query: 35 FGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFG 94
+ P+ TL LG + + +++R + ++LHA ++HL+ N + IL I ++LEE +G
Sbjct: 60 YEPNERTLMLLGA-AYAPAFSNFQLWRVVTPLFLHATILHLVLNLVFILHISLRLEERYG 118
Query: 95 FLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTN 154
+ + Y LS G LLS L Q +SVGAS A FG++G +E+ W +
Sbjct: 119 TKKFLVTYFLSAIVGNLLSML-----MQPWALSVGASTAGFGIIGGMAAEVSVVWCKLSE 173
Query: 155 KCVSI-TMLILVIGVNMA-IGFMPGIDNMAHIGGFVAGILL 193
+ I +M I ++ V + + F +D H+GGF+AG+ L
Sbjct: 174 ELKRIYSMDICILAVLIYFLSFGRTVDTFGHLGGFLAGVAL 214
>sp|Q6GV23|RHBL5_TOXGO Rhomboid-like protease 5 OS=Toxoplasma gondii GN=ROM5 PE=1 SV=1
Length = 841
Score = 71.2 bits (173), Expect = 6e-12, Method: Composition-based stats.
Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 19/163 (11%)
Query: 29 RSENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTN---SLAILFI 85
RS + P+ LG L N V GE++R M+LH +HLL N L+I
Sbjct: 434 RSPAAFDSPNPRVFSSLGALDTNKVRNYGEMFRVVWGMFLHGGWMHLLLNVSCQAQTLWI 493
Query: 86 GVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEI 145
LE +GFLR L+++ G G LLS + ++VG+SGA +GLLGA +
Sbjct: 494 ---LEPAWGFLRTLSLWIVGGVSGSLLSAV-----ANPCTVTVGSSGAFYGLLGALVPFS 545
Query: 146 ITNWTLYTNK-----CVSITMLILVIGVNMAIGFMPGIDNMAH 183
I W + CVS+ +++ G NM +G + G+DN AH
Sbjct: 546 IEYWDHIASPAWFLFCVSVLVMVAQFG-NM-VG-VQGVDNNAH 585
>sp|P20350|RHOM_DROME Protein rhomboid OS=Drosophila melanogaster GN=rho PE=1 SV=2
Length = 355
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+++RFFS M+LHAN HL N + LF G+ LE G RIG++Y+ F G L + +
Sbjct: 149 QVWRFFSYMFLHANWFHLGFNIVIQLFFGIPLEVMHGTARIGVIYMAGVFAGSLGTSVVD 208
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM------- 170
E VGASG ++ LL A L+ I N+ + + +++ + ++
Sbjct: 209 SEV-----FLVGASGGVYALLAAHLANITLNYAHMKSASTQLGSVVIFVSCDLGYALYTQ 263
Query: 171 -----AIGFMPGIDNMAHIGGFVAGILLGFILL 198
A P + +AH+ G +AG+ +GF++L
Sbjct: 264 YFDGSAFAKGPQVSYIAHLTGALAGLTIGFLVL 296
>sp|Q695T9|RHBL2_TOXGO Rhomboid-like protease 2 OS=Toxoplasma gondii GN=ROM2 PE=2 SV=1
Length = 283
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 81/168 (48%), Gaps = 5/168 (2%)
Query: 30 SENSLFGPSTATLKKLGGLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKL 89
+ N + P+ TL G L+ GEI+R ++LH N+ H+L N + IG+ +
Sbjct: 82 APNEILAPTPQTLVMFGANIPELIRV-GEIWRLICPLFLHLNLFHILMNLWVQIRIGLTM 140
Query: 90 EEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNW 149
EE +G+ + +Y FG G+L+ + Q+ GAS A+F L+G L+E+ W
Sbjct: 141 EEKYGWKMLLAVY----FGVGVLANMISAAVLFCGQMKAGASTAVFALIGVQLAELALIW 196
Query: 150 TLYTNKCVSITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGILLGFIL 197
++ +I + + + F +D++ HIGG V G G L
Sbjct: 197 HAIQDRNSAIISVCICLFFVFVSSFGSHMDSVGHIGGLVMGFAAGIWL 244
>sp|Q19821|ROM1_CAEEL Rhomboid-related protein 1 OS=Caenorhabditis elegans GN=rom-1 PE=3
SV=2
Length = 356
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 75/150 (50%), Gaps = 13/150 (8%)
Query: 57 GEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLH 116
GE +RF S M+LHA + HLL N + L +G+ LE RIG +Y+L+ G LL
Sbjct: 164 GEAWRFTSYMFLHAGLNHLLGNVIIQLLVGIPLEVAHKIWRIGPIYLLAVTSGSLLQYAI 223
Query: 117 QDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMA----- 171
S + VGAS ++ L+ A ++ +I NW + + + +L + I ++
Sbjct: 224 DPNS-----LLVGASAGVYALIFAHVANVILNWHEMPLRWIRVLVLFVFIFLDFGGAIHR 278
Query: 172 ---IGFMPGIDNMAHIGGFVAGILLGFILL 198
+ ++AHI G V G+ G+++L
Sbjct: 279 RFYTNDCDSVSHLAHIAGAVTGLFFGYVVL 308
>sp|P58872|RHBL3_HUMAN Rhomboid-related protein 3 OS=Homo sapiens GN=RHBDL3 PE=2 SV=1
Length = 404
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 83/166 (50%), Gaps = 22/166 (13%)
Query: 50 RNLVVY----DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
+N +VY +++R+ + +++HA + HL N + L +GV LE G RIGL+YV +
Sbjct: 198 KNSLVYHPQLRAQVWRYLTYIFMHAGIEHLGLNVVLQLLVGVPLEMVHGATRIGLVYV-A 256
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G G L+ D + VG+SG ++ L+ A L+ I+ NW+ + + M + +
Sbjct: 257 GVVAGSLAVSVADMTAPV----VGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVAL 312
Query: 166 IGVNMAIGFM-------------PGIDNMAHIGGFVAGILLGFILL 198
I ++M G P +AH+GG GI LG ++L
Sbjct: 313 ICMSMEFGRAVWLRFHPSAYPPCPHPSFVAHLGGVAVGITLGVVVL 358
>sp|P96617|YDCA_BACSU Putative rhomboid protease YdcA OS=Bacillus subtilis (strain 168)
GN=ydcA PE=3 SV=1
Length = 199
Score = 61.6 bits (148), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 5/155 (3%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGG 110
NL V +GE +R + + LHA HLL NS++I LE G R L+Y G G
Sbjct: 50 NLGVANGEWWRLITPILLHAGFTHLLFNSMSIFLFAPALERMLGKARFLLVYA----GSG 105
Query: 111 LLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNM 170
++ + ++ + VGASGA+FGL G L ++ L + + + +L V M
Sbjct: 106 IIGNIGTYVTEPLDYVHVGASGAIFGLFGVYLFMVLFRNELIGQEHSKMIITLLAFAVLM 165
Query: 171 AIGFMPGIDNMAHIGGFVAGILLGFILLLRPQYGY 205
+ I+ MAH+ G G LL F+ + + + Y
Sbjct: 166 SF-INSNINMMAHLFGLCGGFLLSFLCVQKKERRY 199
>sp|P54493|GLUP_BACSU Rhomboid protease GluP OS=Bacillus subtilis (strain 168) GN=gluP
PE=1 SV=2
Length = 507
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 82/159 (51%), Gaps = 10/159 (6%)
Query: 47 GLSRNLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSG 106
G N ++ GE +R + + LH + HL N+LA+ +G +E +G R L+Y+ +G
Sbjct: 210 GAKENSLIAQGEWWRLLTPIVLHIGIAHLAFNTLALWSVGTAVERMYGSGRFLLIYLAAG 269
Query: 107 FGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVI 166
G + S + + S GASGA+FG LGA L ++N ++ + ++I++
Sbjct: 270 ITGSIASFVF------SPYPSAGASGAIFGCLGALLYVALSNRKMFLRTIGTNIIVIII- 322
Query: 167 GVNMAIGF-MPGIDNMAHIGGFVAGILLGFILLLRPQYG 204
+N+ GF + IDN HIGG + G L L P+ G
Sbjct: 323 -INLGFGFAVSNIDNSGHIGGLIGGFFAAAALGL-PKAG 359
>sp|P58873|RHBL3_MOUSE Rhomboid-related protein 3 OS=Mus musculus GN=Rhbdl3 PE=2 SV=1
Length = 404
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 50 RNLVVYDGEI----YRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLS 105
+N +VY ++ +R+ + +++HA V L N L +GV LE G RIGL+YV +
Sbjct: 198 KNSLVYHPQLRAQAWRYVTYIFMHAGVEQLGLNVALQLLVGVPLEMVHGATRIGLVYV-A 256
Query: 106 GFGGGLLSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILV 165
G G L+ D + VG+SG ++ L+ A L+ I+ NW+ + + M + +
Sbjct: 257 GVVAGSLAVSVADMTAPV----VGSSGGVYALVSAHLANIVMNWSGMKCQFKLLRMAVAL 312
Query: 166 IGVNMAIGFM-------------PGIDNMAHIGGFVAGILLGFILL 198
I ++M G P +AH+GG GI LG ++L
Sbjct: 313 ICMSMEFGRAVWLRFHPSAYPPCPHPSFVAHLGGVAVGITLGVVVL 358
>sp|A2AGA4|RHBL2_MOUSE Rhomboid-related protein 2 OS=Mus musculus GN=Rhbdl2 PE=1 SV=1
Length = 302
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 82/174 (47%), Gaps = 24/174 (13%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E +RF S M +HA V H++ N L + +G+ LE LR+GL+Y+ G L S +
Sbjct: 118 EAWRFISYMLVHAGVQHIVGNLLMQIVLGIPLEMVHKGLRVGLVYLAGVLAGSLASSIFD 177
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWT--LYTNKCVSITMLILVIGVNMAIG-- 173
L+ VGASG ++ L+G +I N+ + V + ++IL++ +M
Sbjct: 178 P-----LKSLVGASGGVYALMGGYFMNVIVNFREMIPAFGIVRLLVIILIVASDMGFALY 232
Query: 174 ---FMPG----IDNMAHIGGFVAGILLGF--------ILLLRPQYGYVSGPYIA 212
F+P + AHI G AG+ +G+ LL P++ Y+A
Sbjct: 233 RRFFVPANGSPVSFAAHIAGGFAGMSIGYTVFSCFDKTLLKDPRFWIAIAAYVA 286
>sp|O75783|RHBL1_HUMAN Rhomboid-related protein 1 OS=Homo sapiens GN=RHBDL1 PE=2 SV=1
Length = 438
Score = 58.9 bits (141), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 24/170 (14%)
Query: 55 YDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
+ +RF + M++H + L N+L L IGV LE G LRI LLY L+G G L+
Sbjct: 241 HRARAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGLLRISLLY-LAGVLAGSLTV 299
Query: 115 LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG- 173
D VG SG ++ L A L+ ++ NW + M++ ++ ++ +G
Sbjct: 300 SITDMRAPV----VGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGR 355
Query: 174 -----FMPGIDN-------MAHIGGFVAGILLGFILL------LRPQYGY 205
F P + MAH+ G V G+ +G +L LR Q G+
Sbjct: 356 AVWLRFSPPLPASGPQPSFMAHLAGAVVGVSMGLTILRSYEERLRDQCGW 405
>sp|Q8VC82|RHBL1_MOUSE Rhomboid-related protein 1 OS=Mus musculus GN=Rhbdl1 PE=2 SV=1
Length = 373
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 24/170 (14%)
Query: 55 YDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSC 114
+ +RF + M++H + L N+L L IGV LE G LRI LLY L+G G L+
Sbjct: 176 HRARAWRFLTYMFMHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLY-LAGVLAGSLTV 234
Query: 115 LHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG- 173
D VG SG ++ L A L+ ++ NW + M++ ++ ++ +G
Sbjct: 235 SITDMRAPV----VGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGR 290
Query: 174 -----FMPGIDN-------MAHIGGFVAGILLGFILL------LRPQYGY 205
F P + MAH+ G V G+ +G +L LR Q G+
Sbjct: 291 AVWLRFSPPLPASGPQPSFMAHLAGAVVGVSMGLTILRSYEERLRDQCGW 340
>sp|P34356|ROM2_CAEEL Rhomboid-related protein 2 OS=Caenorhabditis elegans GN=rom-2 PE=3
SV=2
Length = 435
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 14/149 (9%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E++R F+ ++ + H++ N L L IGV LE + RI +LY + G +LS L
Sbjct: 168 ELWRLFTYCLINVGIFHIIFNILIQLAIGVPLELVHRW-RIYILYFMGVLFGSILS-LAL 225
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG---- 173
D T+ + GA+G+ F L+ + ++ I TN+ N + +LI+ ++ +
Sbjct: 226 DP---TVFLCGGAAGS-FSLIASHITTIATNFKEMENATCRLPILIVFAALDYVLAVYQR 281
Query: 174 -FMPGIDNMA---HIGGFVAGILLGFILL 198
F P ID ++ H+GG VAGIL FIL
Sbjct: 282 FFAPRIDKVSMYGHLGGLVAGILFTFILF 310
>sp|Q76NQ1|RHDF1_DROME Inactive rhomboid protein 1 OS=Drosophila melanogaster GN=rho-5 PE=2
SV=1
Length = 1429
Score = 56.2 bits (134), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/147 (27%), Positives = 77/147 (52%), Gaps = 17/147 (11%)
Query: 58 EIYRFFSCMWLHANVIHL-LTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL- 115
++YR + + +HA ++HL +T LF+ LE G +R ++Y++SGF G L S +
Sbjct: 1092 QLYRLLTSLCMHAGILHLAITLIFQHLFLA-DLERLIGTVRTAIVYIMSGFAGNLTSAIL 1150
Query: 116 --HQDESQQTLQISVGASGALFGLLGASLSEII-TNWTLYTNKCVSITMLILVIGVNMAI 172
H+ E VG S +L G++ + ++ ++ +W +++ L+L+ V + I
Sbjct: 1151 VPHRPE--------VGPSASLSGVVASLIALLVWMHWKYLHKPHIALFKLLLLCSVLVGI 1202
Query: 173 GFMPGIDNMAHIGGFVAGILLGFILLL 199
G +P N G +AG++ G +L +
Sbjct: 1203 GTLPYQLNFL---GLLAGVICGCLLTM 1226
>sp|Q695U0|RHBL1_TOXGO Rhomboid-like protease 1 OS=Toxoplasma gondii GN=ROM1 PE=2 SV=1
Length = 293
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 53 VVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLL 112
++ G+++R ++LHAN H+ N L +G +E +G L+ LY S G LL
Sbjct: 103 LIKQGQVWRLLLPVFLHANFFHVFFNVFFQLRMGFTIERRYGLLKFTGLYFASAIYGNLL 162
Query: 113 SCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNK------CVSITMLILVI 166
S + + VGAS A FGL+G + E+ W ++ VS +L++++
Sbjct: 163 SA----TAFFCNSLKVGASTAGFGLIGIQICEMALTWHRMRHRDRMLTNMVSFVLLMVLL 218
Query: 167 GVNMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+ G ID M H+GG + G +G +
Sbjct: 219 MFTLNGG---SIDQMGHLGGLLCGFSIGML 245
>sp|Q9NX52|RHBL2_HUMAN Rhomboid-related protein 2 OS=Homo sapiens GN=RHBDL2 PE=1 SV=2
Length = 303
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E +RF S M +HA V H+L N L +G+ LE LR+GL+Y+ G L S +
Sbjct: 119 EAWRFISYMLVHAGVQHILGNLCMQLVLGIPLEMVHKGLRVGLVYLAGVIAGSLASSIF- 177
Query: 118 DESQQTLQISVGASGALFGLLGASLSEIITNW 149
L+ VGASG ++ L+G ++ N+
Sbjct: 178 ----DPLRYLVGASGGVYALMGGYFMNVLVNF 205
>sp|O88779|RHBL1_RAT Rhomboid-related protein 1 (Fragment) OS=Rattus norvegicus
GN=Rhbdl1 PE=2 SV=1
Length = 164
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 24/157 (15%)
Query: 68 LHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQQTLQIS 127
+H + L N+L L IGV LE G LRI LLY L+G G L+ D
Sbjct: 2 MHVGLEQLGFNALLQLMIGVPLEMVHGVLRISLLY-LAGVLAGSLTVSITDMRAPV---- 56
Query: 128 VGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIG------FMPGIDN- 180
VG SG ++ L A L+ ++ NW + M++ ++ ++ +G F P +
Sbjct: 57 VGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMVLALVCMSSEVGRAVWLRFSPPLPAS 116
Query: 181 ------MAHIGGFVAGILLGFILL------LRPQYGY 205
MAH+ G V G+ +G +L LR Q G+
Sbjct: 117 GPQPSFMAHLAGAVVGVSMGLTILRSYEERLRDQCGW 153
>sp|P44783|GLPG_HAEIN Rhomboid protease GlpG OS=Haemophilus influenzae (strain ATCC 51907
/ DSM 11121 / KW20 / Rd) GN=glpG PE=1 SV=1
Length = 192
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
D E++R+ S +H + +H+L N G +E FG +++ +LYV++ G +
Sbjct: 47 DSEVWRYISHTLVHLSNLHILFNLSWFFIFGGMIERTFGSVKLLMLYVVASAITGYV--- 103
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM 175
++ + G SG ++ +LG N L+ TML+ V +A+GF+
Sbjct: 104 ---QNYVSGPAFFGLSGVVYAVLGYVFIRDKLNHHLFDLPEGFFTMLL----VGIALGFI 156
Query: 176 P---GID--NMAHIGGFVAGILLGFI 196
G++ N AHI G + G++ GFI
Sbjct: 157 SPLFGVEMGNAAHISGLIVGLIWGFI 182
>sp|Q8RXW0|Y3761_ARATH Uncharacterized protein At3g17611 OS=Arabidopsis thaliana
GN=At3g17611 PE=2 SV=1
Length = 334
Score = 37.7 bits (86), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 69/155 (44%), Gaps = 20/155 (12%)
Query: 51 NLVVYDGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIG-LLYVLSGFGG 109
+L+ ++ R F + H N HL+ N +++L+ G+KLE G +++ L G
Sbjct: 68 HLIFKHKDLKRLFLSAFYHVNEPHLVYNMMSLLWKGIKLETSMGSSEFASMVFTLIGMSQ 127
Query: 110 GL--------LSCLHQDESQQTLQISVGASGALFGLLGASLSEIITNWTLY----TNKCV 157
G+ L D + + +VG SG LF + S+ ++Y K
Sbjct: 128 GVTLLLAKSLLLLFDYDRAYYN-EYAVGFSGVLFAMKVVLNSQAEDYSSVYGILVPTKYA 186
Query: 158 SITMLILVIGVNMAIGFMPGIDNMAHIGGFVAGIL 192
+ LIL V M F+P + H+GG +AGI+
Sbjct: 187 AWAELIL---VQM---FVPNASFLGHLGGILAGII 215
>sp|Q8LB17|Y3846_ARATH Uncharacterized protein At3g58460 OS=Arabidopsis thaliana
GN=At3g58460 PE=1 SV=2
Length = 403
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 32/47 (68%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVL 104
++YRF++ + H +++H+L N +A++ +G +LE G +R+ L VL
Sbjct: 63 QVYRFYTAIIFHGSLLHVLFNMMALVPMGSELERIMGSVRLLYLTVL 109
>sp|A8GKU2|GLPG_SERP5 Rhomboid protease GlpG OS=Serratia proteamaculans (strain 568)
GN=glpG PE=3 SV=1
Length = 278
Score = 37.0 bits (84), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
+++R+ S +LH +++H+ N L ++G LE+ G ++ +L V+S F G L
Sbjct: 135 QLWRWVSHAFLHFSLLHITFNLLWWWYLGGPLEKRLGSGKLFVLAVVSAFFSGWAQSLFS 194
Query: 118 DESQQTLQISVGASGALFGLLG---ASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGF 174
+ G SG ++ L+G S + + ++L LV G +G
Sbjct: 195 GA------LFGGLSGVVYALMGYCWLSGERAPERGLMLPRGLMVFSVLWLVAGYFDILGM 248
Query: 175 MPGIDNMAHIGGFVAGILLGF 195
I N AH+ G V G+L+ F
Sbjct: 249 --SIANAAHVAGLVLGLLMAF 267
>sp|P53259|PCP1_YEAST Rhomboid protein 1, mitochondrial OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCP1 PE=1 SV=1
Length = 346
Score = 35.8 bits (81), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 56/144 (38%), Gaps = 24/144 (16%)
Query: 69 HANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQDESQ-QTLQIS 127
H HL N LA+ G L G LY+ S G L S + ++ + S
Sbjct: 193 HQEFWHLGMNMLALWSFGTSLATMLGASNFFSLYMNSAIAGSLFSLWYPKLARLAIVGPS 252
Query: 128 VGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFMPGI--------- 178
+GASGALFG+LG Y I + + + + F+ +
Sbjct: 253 LGASGALFGVLGC---------FSYLFPHAKILLFVFPVPGGAWVAFLASVAWNAAGCAL 303
Query: 179 -----DNMAHIGGFVAGILLGFIL 197
D AH+GG + G+L G+ +
Sbjct: 304 RWGSFDYAAHLGGSMMGVLYGWYI 327
>sp|B5XTR5|GLPG_KLEP3 Rhomboid protease GlpG OS=Klebsiella pneumoniae (strain 342)
GN=glpG PE=3 SV=1
Length = 276
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E +R+FS ++H +++H+L N L ++G +E+ G ++ ++ V+S G +
Sbjct: 134 EAWRYFSHAFMHFSLMHILFNLLWWWYLGGAVEKRIGSGKLVVITVISALLSGFV----- 188
Query: 118 DESQQTLQISVGASGALFGLLGASL--SEIITNWTLYTNKCVSITMLILVIGVNMAIGFM 175
+ Q + G SG ++ L+G E +Y + + + L+ +I + F
Sbjct: 189 -QHQFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLILFSLVWLIAGWFDV-FG 246
Query: 176 PGIDNMAHIGGFVAGILLGFI 196
I N AH+ G G+ + F+
Sbjct: 247 MAIANGAHVAGLATGLAMAFV 267
>sp|Q5UQ86|RHBDL_MIMIV Putative rhomboid protein L523 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L523 PE=3 SV=1
Length = 171
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 10/135 (7%)
Query: 56 DGEIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCL 115
+ EI + + HAN+ HLL NS + + LE+ G + + +L
Sbjct: 26 NSEIINYLIRTFYHANLQHLLANSFSFYMLSF-LEDVMGHAKFAFCIIFIWILSSMLLLA 84
Query: 116 HQDESQQTLQISVGASGALFGLLGASLSEIITNWTLYTNKCVSITMLILVIGVNMAIGFM 175
+VG SG +FGL+ ++ +L N+ +SI L+L I + F+
Sbjct: 85 EHTAFPSRKVYTVGFSGVIFGLI------VVYLMSLGKNRGLSIAGLVLSI---IPQFFV 135
Query: 176 PGIDNMAHIGGFVAG 190
GI HI G +AG
Sbjct: 136 SGISYEGHICGMIAG 150
>sp|A6TF43|GLPG_KLEP7 Rhomboid protease GlpG OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=glpG PE=3 SV=1
Length = 276
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 9/141 (6%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E +R+FS ++H +++H+L N L ++G +E+ G ++ ++ V+S G +
Sbjct: 134 EAWRYFSHAFMHFSLMHILFNLLWWWYLGGAVEKRIGSGKLVVITVISALLSGFV----- 188
Query: 118 DESQQTLQISVGASGALFGLLGASL--SEIITNWTLYTNKCVSITMLILVIGVNMAIGFM 175
+ Q + G SG ++ L+G E +Y + + + L+ +I + F
Sbjct: 189 -QHQFSGPWFGGLSGVVYALMGYVWLRGERDPQSGIYLQRGLILFSLVWLIAGWFDV-FG 246
Query: 176 PGIDNMAHIGGFVAGILLGFI 196
I N AH+ G G+ + F+
Sbjct: 247 MAIANGAHVAGLATGLAMAFV 267
>sp|B5BHH5|GLPG_SALPK Rhomboid protease GlpG OS=Salmonella paratyphi A (strain AKU_12601)
GN=glpG PE=3 SV=1
Length = 276
Score = 35.0 bits (79), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E++R+F+ +++H +++H+L N L ++G +E+ G ++ ++ V+S G + Q
Sbjct: 134 EVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG---YVQQ 190
Query: 118 DESQQTLQISVGASGALFGLLGASL--SEIITNWTLYTNKCVSITMLILVIGVNMAIGFM 175
S G SG ++ L+G E +Y + + I L+ ++ + F
Sbjct: 191 KFSGPWFG---GLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVA-SWFDWFG 246
Query: 176 PGIDNMAHIGGFVAGILLGFI 196
+ N AHI G + G+ + F+
Sbjct: 247 MSMANGAHIAGLIVGLAMAFV 267
>sp|Q5PLZ8|GLPG_SALPA Rhomboid protease GlpG OS=Salmonella paratyphi A (strain ATCC 9150
/ SARB42) GN=glpG PE=3 SV=1
Length = 276
Score = 35.0 bits (79), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E++R+F+ +++H +++H+L N L ++G +E+ G ++ ++ V+S G + Q
Sbjct: 134 EVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG---YVQQ 190
Query: 118 DESQQTLQISVGASGALFGLLGASL--SEIITNWTLYTNKCVSITMLILVIGVNMAIGFM 175
S G SG ++ L+G E +Y + + I L+ ++ + F
Sbjct: 191 KFSGPWFG---GLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVA-SWFDWFG 246
Query: 176 PGIDNMAHIGGFVAGILLGFI 196
+ N AHI G + G+ + F+
Sbjct: 247 MSMANGAHIAGLIVGLAMAFV 267
>sp|Q8ZLH5|GLPG_SALTY Rhomboid protease GlpG OS=Salmonella typhimurium (strain LT2 /
SGSC1412 / ATCC 700720) GN=glpG PE=3 SV=1
Length = 276
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 23/148 (15%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E++R+F+ +++H +++H+L N L ++G +E+ G ++ ++ V+S G + Q
Sbjct: 134 EVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG---YVQQ 190
Query: 118 DESQQTLQISVGASGALFGLLGASL--SEIITNWTLYTNKCVSITMLILVI-------GV 168
S G SG ++ L+G E +Y + + I L+ ++ G+
Sbjct: 191 KFSGPWFG---GLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFDWFGM 247
Query: 169 NMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+MA N AHI G + G+ + F+
Sbjct: 248 SMA--------NGAHIAGLIVGLAMAFV 267
>sp|B4SVM1|GLPG_SALNS Rhomboid protease GlpG OS=Salmonella newport (strain SL254) GN=glpG
PE=3 SV=2
Length = 276
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 23/148 (15%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E++R+F+ +++H +++H+L N L ++G +E+ G ++ ++ V+S G + Q
Sbjct: 134 EVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG---YVQQ 190
Query: 118 DESQQTLQISVGASGALFGLLGASL--SEIITNWTLYTNKCVSITMLILVI-------GV 168
S G SG ++ L+G E +Y + + I L+ ++ G+
Sbjct: 191 KFSGPWFG---GLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFDWFGM 247
Query: 169 NMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+MA N AHI G + G+ + F+
Sbjct: 248 SMA--------NGAHIAGLIVGLAMAFV 267
>sp|B4TKV0|GLPG_SALHS Rhomboid protease GlpG OS=Salmonella heidelberg (strain SL476)
GN=glpG PE=3 SV=1
Length = 276
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 23/148 (15%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E++R+F+ +++H +++H+L N L ++G +E+ G ++ ++ V+S G + Q
Sbjct: 134 EVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG---YVQQ 190
Query: 118 DESQQTLQISVGASGALFGLLGASL--SEIITNWTLYTNKCVSITMLILVI-------GV 168
S G SG ++ L+G E +Y + + I L+ ++ G+
Sbjct: 191 KFSGPWFG---GLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFDWFGM 247
Query: 169 NMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+MA N AHI G + G+ + F+
Sbjct: 248 SMA--------NGAHIAGLIVGLAMAFV 267
>sp|B5R7J1|GLPG_SALG2 Rhomboid protease GlpG OS=Salmonella gallinarum (strain 287/91 /
NCTC 13346) GN=glpG PE=3 SV=1
Length = 276
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 23/148 (15%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E++R+F+ +++H +++H+L N L ++G +E+ G ++ ++ V+S G + Q
Sbjct: 134 EVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG---YVQQ 190
Query: 118 DESQQTLQISVGASGALFGLLGASL--SEIITNWTLYTNKCVSITMLILVI-------GV 168
S G SG ++ L+G E +Y + + I L+ ++ G+
Sbjct: 191 KFSGPWFG---GLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFDWFGM 247
Query: 169 NMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+MA N AHI G + G+ + F+
Sbjct: 248 SMA--------NGAHIAGLIVGLAMAFV 267
>sp|B5R383|GLPG_SALEP Rhomboid protease GlpG OS=Salmonella enteritidis PT4 (strain
P125109) GN=glpG PE=3 SV=1
Length = 276
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 23/148 (15%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E++R+F+ +++H +++H+L N L ++G +E+ G ++ ++ V+S G + Q
Sbjct: 134 EVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG---YVQQ 190
Query: 118 DESQQTLQISVGASGALFGLLGASL--SEIITNWTLYTNKCVSITMLILVI-------GV 168
S G SG ++ L+G E +Y + + I L+ ++ G+
Sbjct: 191 KFSGPWFG---GLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFDWFGM 247
Query: 169 NMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+MA N AHI G + G+ + F+
Sbjct: 248 SMA--------NGAHIAGLIVGLAMAFV 267
>sp|B5FKE3|GLPG_SALDC Rhomboid protease GlpG OS=Salmonella dublin (strain CT_02021853)
GN=glpG PE=3 SV=1
Length = 276
Score = 34.7 bits (78), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 23/148 (15%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E++R+F+ +++H +++H+L N L ++G +E+ G ++ ++ V+S G + Q
Sbjct: 134 EVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG---YVQQ 190
Query: 118 DESQQTLQISVGASGALFGLLGASL--SEIITNWTLYTNKCVSITMLILVI-------GV 168
S G SG ++ L+G E +Y + + I L+ ++ G+
Sbjct: 191 KFSGPWFG---GLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFDWFGM 247
Query: 169 NMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+MA N AHI G + G+ + F+
Sbjct: 248 SMA--------NGAHIAGLIVGLAMAFV 267
>sp|Q8Z229|GLPG_SALTI Rhomboid protease GlpG OS=Salmonella typhi GN=glpG PE=3 SV=1
Length = 276
Score = 34.7 bits (78), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 23/148 (15%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E++R+F+ +++H +++H+L N L ++G +E+ G ++ ++ V+S G + Q
Sbjct: 134 EVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG---YVQQ 190
Query: 118 DESQQTLQISVGASGALFGLLGASL--SEIITNWTLYTNKCVSITMLILVI-------GV 168
S G SG ++ L+G E +Y + + I L+ ++ G+
Sbjct: 191 KFSGPWFG---GLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFDWFGM 247
Query: 169 NMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+MA N AHI G + G+ + F+
Sbjct: 248 SMA--------NGAHIAGLIVGLAMAFV 267
>sp|B4TY77|GLPG_SALSV Rhomboid protease GlpG OS=Salmonella schwarzengrund (strain
CVM19633) GN=glpG PE=3 SV=1
Length = 276
Score = 34.7 bits (78), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 71/148 (47%), Gaps = 23/148 (15%)
Query: 58 EIYRFFSCMWLHANVIHLLTNSLAILFIGVKLEEDFGFLRIGLLYVLSGFGGGLLSCLHQ 117
E++R+F+ +++H +++H+L N L ++G +E+ G ++ ++ V+S G + Q
Sbjct: 134 EVWRYFTHIFMHFSLMHILFNLLWWWYLGGAVEKRLGSGKLIVITVISALLSG---YVQQ 190
Query: 118 DESQQTLQISVGASGALFGLLGASL--SEIITNWTLYTNKCVSITMLILVI-------GV 168
S G SG ++ L+G E +Y + + I L+ ++ G+
Sbjct: 191 KFSGPWFG---GLSGVVYALMGYVWLRGERDPQSGIYLQRGLIIFALLWIVAGWFDWFGM 247
Query: 169 NMAIGFMPGIDNMAHIGGFVAGILLGFI 196
+MA N AHI G + G+ + F+
Sbjct: 248 SMA--------NGAHIAGLIVGLAMAFV 267
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.145 0.457
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,214,032
Number of Sequences: 539616
Number of extensions: 3793463
Number of successful extensions: 10692
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 10553
Number of HSP's gapped (non-prelim): 165
length of query: 242
length of database: 191,569,459
effective HSP length: 114
effective length of query: 128
effective length of database: 130,053,235
effective search space: 16646814080
effective search space used: 16646814080
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 59 (27.3 bits)