BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026174
(242 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O82626|ERG_ANTMA GTP-binding protein ERG OS=Antirrhinum majus GN=ERG PE=2 SV=1
Length = 423
Score = 250 bits (638), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 137/246 (55%), Positives = 176/246 (71%), Gaps = 16/246 (6%)
Query: 1 MKALRALRTLAPFAEKPNKPRLNPLFIHRFYSAQPQQTDNETE-------NDCDSVFDSS 53
MKA+RA L P + +++HRFYSAQPQ TD+E + D+VFDSS
Sbjct: 1 MKAVRAALRLRPLTNSIS----TSVYLHRFYSAQPQHTDDEHHPKPEELLHQSDAVFDSS 56
Query: 54 YFRIPTIDDPQNNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEER-KHRA 112
+F + D N A+ + TWDE+YR+R VF E+ +I + +EE++ K A
Sbjct: 57 HFDL----DLNNLAASGAETTTWDERYRDRVKSRVFDEDDTSSYSKILKRDEEKKYKSAA 112
Query: 113 LAKALLQAALERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTN 172
LAK+LL+AAL+ +E E EVKEEDQKS++VGIIGAPNAGKS++ NY+VGTKV+AVSRKTN
Sbjct: 113 LAKSLLEAALDDEEVEVGEVKEEDQKSLSVGIIGAPNAGKSALTNYIVGTKVSAVSRKTN 172
Query: 173 TTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV 232
TTTHEVLGV+TK DTQIC FDTPGLML KSG + D+KVR ES WS++ L++VL+V+FDV
Sbjct: 173 TTTHEVLGVLTKRDTQICFFDTPGLMLKKSGIPYNDIKVRNESGWSSITLYDVLIVIFDV 232
Query: 233 HRHLTR 238
HRHLTR
Sbjct: 233 HRHLTR 238
>sp|O82653|ERG_ARATH GTP-binding protein ERG OS=Arabidopsis thaliana GN=ERG PE=1 SV=2
Length = 437
Score = 226 bits (575), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 125/250 (50%), Positives = 165/250 (66%), Gaps = 14/250 (5%)
Query: 1 MKALRALRTLAPFAEK-----PNKPRLNPLFIHRFYSAQPQQTDNETENDCDSVFDSSYF 55
MKA R+LR L + P P F+ RFYSAQP + + N+ S DS +
Sbjct: 1 MKAFRSLRILISISRTTTKTTPRNPHQAQNFLRRFYSAQPNLDEPTSINEDGSSSDSVFD 60
Query: 56 RIP-TIDDPQNNNAAKKQEPTWDEKYRERTDRIVFGEEAQKGKLRIFQEEEEERKHRALA 114
IDD ++ K +E TWD+ YRER ++ FG +KGK+++ +EE E ++
Sbjct: 61 SSQYPIDDSNVDSVKKPKEATWDKGYRERVNKAFFGNLTEKGKVKVAEEESSEDDEDSVD 120
Query: 115 KALLQAALER--------QEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAA 166
++ + A +E E EV+EEDQKS+ VGIIG PNAGKSS+ N+MVGTKVAA
Sbjct: 121 RSRILAKALLEAALESPDEELGEGEVREEDQKSLNVGIIGPPNAGKSSLTNFMVGTKVAA 180
Query: 167 VSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVL 226
SRKTNTTTHEVLGV+TK DTQ+C FDTPGLML KSGY +KD+K RV++AW++V+LF+VL
Sbjct: 181 ASRKTNTTTHEVLGVLTKGDTQVCFFDTPGLMLKKSGYGYKDIKARVQNAWTSVDLFDVL 240
Query: 227 MVVFDVHRHL 236
+V+FDVHRHL
Sbjct: 241 IVMFDVHRHL 250
>sp|B5X2B8|ERAL1_SALSA GTPase Era, mitochondrial OS=Salmo salar GN=eral1 PE=2 SV=1
Length = 457
Score = 83.2 bits (204), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 62/98 (63%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ K + V IIGAPNAGKS++ N ++G KV AVS+K +TT LGV+T+ DTQI + DT
Sbjct: 104 ENSKVLRVAIIGAPNAGKSTLSNQLLGRKVFAVSKKVHTTRARALGVLTEDDTQIILLDT 163
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV 232
PGL H+ K +E W+ V +++V+ DV
Sbjct: 164 PGLTTPTKVKRHQLEKSLLEDPWNTVKEAGLVVVMVDV 201
>sp|Q8JIF5|ERAL1_CHICK GTPase Era, mitochondrial OS=Gallus gallus GN=ERAL1 PE=1 SV=1
Length = 461
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
K + + IIGAPN+GKS++ N ++G KV VS+K +TT + GV+T DTQ+ I DTPGL
Sbjct: 89 KVLRISIIGAPNSGKSTLSNQLLGRKVFPVSKKVHTTRCKARGVITHEDTQLIILDTPGL 148
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTR 238
HK + W ++ ++++V+ DV H TR
Sbjct: 149 TSPMKAKRHKLEAAMLTDPWDSMKHADLVLVLVDVSDHWTR 189
>sp|A8GUZ8|ERA_RICB8 GTPase Era OS=Rickettsia bellii (strain OSU 85-389) GN=era PE=3
SV=1
Length = 295
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQI ++DTPG
Sbjct: 6 QKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLNDTQIILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL 236
+ K K V AWS+++ +++M++ D + L
Sbjct: 66 IFEPKGTLE----KAMVRCAWSSLHSADIVMLIIDSLKPL 101
>sp|Q1RHA4|ERA_RICBR GTPase Era OS=Rickettsia bellii (strain RML369-C) GN=era PE=3 SV=1
Length = 295
Score = 78.2 bits (191), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 64/100 (64%), Gaps = 4/100 (4%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQI ++DTPG
Sbjct: 6 QKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLNDTQIILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL 236
+ K K V AWS+++ +++M++ D + L
Sbjct: 66 IFEPKGTLE----KAMVRCAWSSLHSADIVMLIIDSLKPL 101
>sp|Q92JA9|ERA_RICCN GTPase Era OS=Rickettsia conorii (strain ATCC VR-613 / Malish 7)
GN=era PE=3 SV=1
Length = 339
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Query: 133 KEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIF 192
K +QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++
Sbjct: 46 KMSNQKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILY 105
Query: 193 DTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD 231
DTPG+ K K V AWS+++ ++++++ D
Sbjct: 106 DTPGIFEPKGSLE----KAMVRCAWSSLHSADLVLLIID 140
>sp|A8EXI4|ERA_RICCK GTPase Era OS=Rickettsia canadensis (strain McKiel) GN=era PE=3
SV=1
Length = 295
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 62/95 (65%), Gaps = 4/95 (4%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+V+V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++DTPG
Sbjct: 6 QKTVSVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD 231
+ K K V AWS+++ +++M++ D
Sbjct: 66 IFEPKGTLE----KAMVRCAWSSLHSADLVMLIID 96
>sp|A8GM80|ERA_RICAH GTPase Era OS=Rickettsia akari (strain Hartford) GN=era PE=3 SV=1
Length = 293
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 63/96 (65%), Gaps = 4/96 (4%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+Q++++V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++DTP
Sbjct: 3 NQRTISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILYDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD 231
G+ K K V AWS+++ +++M++ D
Sbjct: 63 GIFEPKGSLE----KAMVRCAWSSLHSADLVMLIID 94
>sp|B8J3P9|ERA_DESDA GTPase Era OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM
6949) GN=era PE=3 SV=1
Length = 307
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS+++N ++G KV V+ K TT ++++G++T D Q DTPGL +
Sbjct: 11 VALMGPPNAGKSTLLNALLGQKVTIVTPKPQTTRNQIVGILTDDDAQTIFMDTPGLTQVR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL 236
S K +++ W ++N +++M V D H ++
Sbjct: 71 GRLS----KTMIQAVWQSLNQADIIMPVLDAHLYI 101
>sp|A1VHK4|ERA_DESVV GTPase Era OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4)
GN=era PE=3 SV=1
Length = 308
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N ++G KVA V+ K TT ++++G++++ D Q+ DTPG+ +
Sbjct: 11 VALIGPPNAGKSTLLNALIGQKVAIVTSKPQTTRNQIVGILSRKDAQVVFMDTPGIHQLR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFD 231
+ K+ +++AW ++N + L+V+ D
Sbjct: 71 GRLN----KMLLQTAWQSMNAADALIVMLD 96
>sp|Q72G11|ERA_DESVH GTPase Era OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC
29579 / NCIMB 8303) GN=era PE=3 SV=1
Length = 308
Score = 74.7 bits (182), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IG PNAGKS+++N ++G KVA V+ K TT ++++G++++ D Q+ DTPG+ +
Sbjct: 11 VALIGPPNAGKSTLLNALIGQKVAIVTSKPQTTRNQIVGILSRKDAQVVFMDTPGIHQLR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFD 231
+ K+ +++AW ++N + L+V+ D
Sbjct: 71 GRLN----KMLLQTAWQSMNAADALIVMLD 96
>sp|Q4UKB0|ERA_RICFE GTPase Era OS=Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
GN=era PE=3 SV=1
Length = 293
Score = 74.3 bits (181), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 61/95 (64%), Gaps = 4/95 (4%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+++ IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQ+ ++DTPG
Sbjct: 4 QKTISFCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQVILYDTPG 63
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD 231
+ K K V AWS+++ +++M++ D
Sbjct: 64 IFEPKGTLE----KAMVRCAWSSLHSADLVMLIID 94
>sp|B0S6U7|ERAL1_DANRE GTPase Era, mitochondrial OS=Danio rerio GN=eral1 PE=2 SV=1
Length = 447
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ KS+ V I+G+PNAGKS++ N ++G K+ AVS K +TT +GV+T+ DTQI + DT
Sbjct: 106 ENAKSLKVAIVGSPNAGKSTLTNQLLGRKLFAVSSKVHTTRSRAVGVLTENDTQIVLLDT 165
Query: 195 PGL 197
PGL
Sbjct: 166 PGL 168
>sp|Q9ZE30|ERA_RICPR GTPase Era OS=Rickettsia prowazekii (strain Madrid E) GN=era PE=3
SV=1
Length = 295
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+++V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQI ++DTPG
Sbjct: 6 QKTISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIVTLKDTQIILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD 231
+ K K V AWS+V ++++ + D
Sbjct: 66 IFEPKGMLE----KAMVRCAWSSVYSADLVLSIID 96
>sp|Q68XY6|ERA_RICTY GTPase Era OS=Rickettsia typhi (strain ATCC VR-144 / Wilmington)
GN=era PE=3 SV=1
Length = 295
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 62/100 (62%), Gaps = 4/100 (4%)
Query: 137 QKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPG 196
QK+++V IIG PN+GKS+++N ++G K++ V+ K TT + G++T DTQI ++DTPG
Sbjct: 6 QKTISVCIIGRPNSGKSTLLNRIIGEKLSIVTPKVQTTRSIITGIITLKDTQIILYDTPG 65
Query: 197 LMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL 236
+ K K V AWS++ ++++ + D + L
Sbjct: 66 IFEPKGMLE----KAMVRCAWSSLYSADLVLSIIDSLKPL 101
>sp|B7K414|ERA_CYAP8 GTPase Era OS=Cyanothece sp. (strain PCC 8801) GN=era PE=3 SV=1
Length = 314
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 63/100 (63%), Gaps = 4/100 (4%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E KS VGIIG PN GKS+++N +VG K+A S + TT + + G++T + QI
Sbjct: 15 IAPEGFKSGFVGIIGRPNVGKSTLMNQLVGQKIAITSPVSQTTRNRLRGILTTEEAQIIF 74
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD 231
DTPG ++K H+ K+ V++A +A+N ++++VV D
Sbjct: 75 VDTPG--IHKP--HHQLGKILVQNAEAAINAVDIILVVVD 110
>sp|B6JGG2|ERA_OLICO GTPase Era OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM
1227 / OM5) GN=era PE=3 SV=1
Length = 308
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + + QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVVEGNAQIVLVDTPGIFTPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL 236
+ V +AWS + +++ V+ D L
Sbjct: 78 RRLD----RAMVSTAWSGAHDADMVCVLLDARAGL 108
>sp|A4YWC7|ERA_BRASO GTPase Era OS=Bradyrhizobium sp. (strain ORS278) GN=era PE=3 SV=1
Length = 307
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + +QI + DTPG+ K
Sbjct: 17 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGQSQIILVDTPGIFSPK 76
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL 236
+ V +AWS + +++ V+ D + L
Sbjct: 77 RRLD----RAMVTTAWSGAHDADLVCVLLDAKKGL 107
>sp|A5EKL6|ERA_BRASB GTPase Era OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182)
GN=era PE=3 SV=1
Length = 308
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG+KV VSRK TT + G++ + +QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGSKVTIVSRKVQTTRALIRGIVIEGTSQIILVDTPGIFSPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL 236
+ V +AWS + +++ V+ D + L
Sbjct: 78 RRLD----RAMVTTAWSGAHDADLVCVLLDAKKGL 108
>sp|B8DQN1|ERA_DESVM GTPase Era OS=Desulfovibrio vulgaris (strain Miyazaki F / DSM
19637) GN=era PE=3 SV=1
Length = 307
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V ++G PNAGKS+++N +G KVA V+ + TT ++++G++++ D Q+ DTPG+ +
Sbjct: 11 VALLGPPNAGKSTLLNSALGHKVAIVTPRAQTTRNQIVGILSEPDAQVIFMDTPGIHQQR 70
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTR 238
+ K+ +++AW +++ +V++V+ D ++ +
Sbjct: 71 GRMN----KILLQTAWQSMHSADVILVMLDADLYIKK 103
>sp|Q8YG75|ERA_BRUME GTPase Era OS=Brucella melitensis biotype 1 (strain 16M / ATCC
23456 / NCTC 10094) GN=era PE=3 SV=1
Length = 311
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E + +S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI
Sbjct: 11 ETEATQTRSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIV 70
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH 233
+ DTPG+ K + V +AW ++++V+ D
Sbjct: 71 LVDTPGIFRPKRRLD----RAMVTTAWGGAKDADIILVIIDAQ 109
>sp|Q8G1P9|ERA_BRUSU GTPase Era OS=Brucella suis biovar 1 (strain 1330) GN=era PE=3 SV=1
Length = 311
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 4/103 (3%)
Query: 131 EVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQIC 190
E + +S V +IGAPNAGKS+++N +VGTKV+ V+ K TT V G+ + QI
Sbjct: 11 ETEATQTRSGFVALIGAPNAGKSTLVNQLVGTKVSIVTHKVQTTRALVRGIFIEGPAQIV 70
Query: 191 IFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH 233
+ DTPG+ K + V +AW ++++V+ D
Sbjct: 71 LVDTPGIFRPKRRLD----RAMVTTAWGGAKDADIILVIIDAQ 109
>sp|P58071|ERA_CAUCR GTPase Era OS=Caulobacter crescentus (strain ATCC 19089 / CB15)
GN=era PE=3 SV=1
Length = 316
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
IIGAPNAGKS+++N MVG KV+ V++K TT V GV + DTQI + DTPG+ +
Sbjct: 15 IIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAIEGDTQIVLVDTPGIFSPRRR 74
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL 236
+ V +AW+ E + + DV L
Sbjct: 75 LD----RAMVRAAWAGSEEAEATVHLVDVQAEL 103
>sp|B8H630|ERA_CAUCN GTPase Era OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=era
PE=3 SV=1
Length = 316
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 53/93 (56%), Gaps = 4/93 (4%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
IIGAPNAGKS+++N MVG KV+ V++K TT V GV + DTQI + DTPG+ +
Sbjct: 15 IIGAPNAGKSTLVNRMVGAKVSIVTQKVQTTRFPVRGVAIEGDTQIVLVDTPGIFSPRRR 74
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL 236
+ V +AW+ E + + DV L
Sbjct: 75 LD----RAMVRAAWAGSEEAEATVHLVDVQAEL 103
>sp|A5PK43|ERAL1_BOVIN GTPase Era, mitochondrial OS=Bos taurus GN=ERAL1 PE=2 SV=1
Length = 437
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 54/86 (62%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ + + V ++GAPNAGKS++ N ++G KV VS+K +TT + LGV+T+ +TQ+ + DT
Sbjct: 109 ENPRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSKKVHTTRSQALGVITEKETQVILLDT 168
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAV 220
PGL+ H +E W ++
Sbjct: 169 PGLISPAKQKRHHLELSLLEDPWKSM 194
>sp|O69162|ERA_BRAJA GTPase Era OS=Bradyrhizobium japonicum (strain USDA 110) GN=era
PE=3 SV=3
Length = 308
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V +IGAPN GKS+++N +VG KV VSRK TT + G++ + + QI + DTPG+ K
Sbjct: 18 VALIGAPNVGKSTLVNALVGAKVTIVSRKVQTTRALIRGIVIENNAQIILVDTPGIFSPK 77
Query: 202 SGYSHKDVKVRVESAWSAVNLFEVLMVVFD 231
+ V +AWS + +++ V+ D
Sbjct: 78 RRLD----RAMVSTAWSGAHDADLVCVLLD 103
>sp|O75616|ERAL1_HUMAN GTPase Era, mitochondrial OS=Homo sapiens GN=ERAL1 PE=1 SV=2
Length = 437
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ + + V ++GAPNAGKS++ N ++G KV VSRK +TT + LGV+T+ +TQ+ + DT
Sbjct: 109 ENSRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSRKVHTTRCQALGVITEKETQVILLDT 168
Query: 195 PGLM 198
PG++
Sbjct: 169 PGII 172
>sp|Q9KPB3|ERA_VIBCH GTPase Era OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El
Tor Inaba N16961) GN=era PE=3 SV=3
Length = 325
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 2/99 (2%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q V I+G PN GKS+++N ++G K++ SRK TT H ++GV T + Q DT
Sbjct: 27 ENQHCGFVAIVGRPNVGKSTLLNNLLGQKISITSRKPQTTRHRIMGVETDGNYQAIYVDT 86
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVH 233
PGL + + ++ + S+ S VNL VL VV H
Sbjct: 87 PGLHIEEKRAINRLMNRAASSSLSDVNL--VLFVVEGTH 123
>sp|Q7MHN9|ERA_VIBVY GTPase Era OS=Vibrio vulnificus (strain YJ016) GN=era PE=3 SV=1
Length = 320
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
E++ E+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T D
Sbjct: 15 EKKSTSSENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDY 74
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLM 227
Q DTPGL + + ++ + S+ S VNL L+
Sbjct: 75 QAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLVFFLV 114
>sp|Q8DC75|ERA_VIBVU GTPase Era OS=Vibrio vulnificus (strain CMCP6) GN=era PE=3 SV=1
Length = 320
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%)
Query: 128 EEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADT 187
E++ E+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T D
Sbjct: 15 EKKSTSSENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDY 74
Query: 188 QICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLM 227
Q DTPGL + + ++ + S+ S VNL L+
Sbjct: 75 QAIYVDTPGLHIEEKRAINRLMNRAANSSLSDVNLVFFLV 114
>sp|Q9CZU4|ERAL1_MOUSE GTPase Era, mitochondrial OS=Mus musculus GN=Eral1 PE=2 SV=1
Length = 437
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 56/86 (65%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ + + V ++GAPNAGKS++ N ++G KV VS+K +TT + LGV+T+ +TQ+ + DT
Sbjct: 109 ENPRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSKKVHTTRCQALGVITEKETQVILLDT 168
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAV 220
PG++ H + +E W+++
Sbjct: 169 PGIISPVKQKRHHLERSLLEDPWTSM 194
>sp|Q49Y10|ERA_STAS1 GTPase Era OS=Staphylococcus saprophyticus subsp. saprophyticus
(strain ATCC 15305 / DSM 20229) GN=era PE=3 SV=1
Length = 299
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS + IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFISIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTQEDAQIIFLDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTR 238
G ++K + D +RV A + ++ + +M + +V+ + R
Sbjct: 63 G--IHKPKHKLGDYMMRV--ATNTLSEIDAIMFMVNVNEDIGR 101
>sp|Q0APC5|ERA_MARMM GTPase Era OS=Maricaulis maris (strain MCS10) GN=era PE=3 SV=1
Length = 314
Score = 67.8 bits (164), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 50/88 (56%), Gaps = 4/88 (4%)
Query: 144 IIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNKSG 203
+IG+PNAGKS+++N +VG KV V+ K TT V GV +TQI + DTPG+ K+
Sbjct: 13 VIGSPNAGKSTLVNALVGEKVTIVTHKVQTTRFAVRGVALAGETQIVLVDTPGVFAPKTR 72
Query: 204 YSHKDVKVRVESAWSAVNLFEVLMVVFD 231
K V +AWS + +M V D
Sbjct: 73 LD----KSMVAAAWSGAGEADTIMHVVD 96
>sp|Q985A5|ERA_RHILO GTPase Era OS=Rhizobium loti (strain MAFF303099) GN=era PE=3 SV=1
Length = 310
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 122 LERQEEEEEEVKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGV 181
+ER + E + S V +IGAPNAGKS+++N +VG KV+ V+ K TT V G+
Sbjct: 1 MERGMTDIETAETPATHSGFVALIGAPNAGKSTLVNQLVGAKVSIVTHKVQTTRAIVRGI 60
Query: 182 MTKADTQICIFDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHL 236
T + QI DTPG+ K V +AW ++++++ D R +
Sbjct: 61 ATHDNAQIVFVDTPGIFKPKRRLD----TAMVTTAWGGAKDADIVLLLIDAERGI 111
>sp|Q4L6R7|ERA_STAHJ GTPase Era OS=Staphylococcus haemolyticus (strain JCSC1435) GN=era
PE=3 SV=2
Length = 299
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFMNRVIGHKIAIMSDKAQTTRNKIQGVMTRNDAQIIFLDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTR 238
G ++K + D +RV A + ++ + +M + +V+ + R
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEEIGR 101
>sp|Q5HNY0|ERA_STAEQ GTPase Era OS=Staphylococcus epidermidis (strain ATCC 35984 /
RP62A) GN=era PE=3 SV=1
Length = 299
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTR 238
G ++K + D +RV A + ++ + +M + +V+ + R
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGR 101
>sp|B1WT49|ERA_CYAA5 GTPase Era OS=Cyanothece sp. (strain ATCC 51142) GN=era PE=3 SV=1
Length = 314
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 132 VKEEDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICI 191
+ E KS VGIIG PN GKS+++N ++G K+A S + TT + + G++T QI
Sbjct: 15 IAPEGFKSGFVGIIGRPNVGKSTLMNQLIGQKIAITSPVSQTTRNRLQGILTTDKAQIIF 74
Query: 192 FDTPGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFD 231
DTPG+ H K+ V++A +A+N +++++V D
Sbjct: 75 VDTPGI----HKPHHTLGKIIVKNAKTAINSVDIILLVVD 110
>sp|Q8CP21|ERA_STAES GTPase Era OS=Staphylococcus epidermidis (strain ATCC 12228) GN=era
PE=3 SV=1
Length = 299
Score = 67.8 bits (164), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 136 DQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTP 195
+ KS V IIG PN GKS+ +N ++G K+A +S K TT +++ GVMT+ D QI DTP
Sbjct: 3 EHKSGFVSIIGRPNVGKSTFVNRVIGHKIAIMSDKAQTTRNKIQGVMTRDDAQIIFIDTP 62
Query: 196 GLMLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDVHRHLTR 238
G ++K + D +RV A + ++ + +M + +V+ + R
Sbjct: 63 G--IHKPKHKLGDYMMRV--AKNTLSEIDAIMFMVNVNEDIGR 101
>sp|C1DQS3|ERA_AZOVD GTPase Era OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303)
GN=era PE=3 SV=1
Length = 300
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 39/56 (69%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
V I+G PN GKS+++N+++G K+A SRK TT H +LG+ T+ D Q DTPGL
Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGL 67
>sp|A4VW74|ERA_STRSY GTPase Era OS=Streptococcus suis (strain 05ZYH33) GN=era PE=3 SV=1
Length = 299
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +NY++G K+A +S K TT ++++G+ T + QI DTPG+
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTEEEQIVFIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV 232
K+ VESA+S L EV V+F V
Sbjct: 64 HKPKTALGD----FMVESAYST--LREVDTVLFMV 92
>sp|A4W2H9|ERA_STRS2 GTPase Era OS=Streptococcus suis (strain 98HAH33) GN=era PE=3 SV=1
Length = 299
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 138 KSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
KS V I+G PN GKS+ +NY++G K+A +S K TT ++++G+ T + QI DTPG+
Sbjct: 4 KSGFVAILGRPNVGKSTFLNYVMGQKIAIMSDKAQTTRNKIMGIYTTEEEQIVFIDTPGI 63
Query: 198 MLNKSGYSHKDVKVRVESAWSAVNLFEVLMVVFDV 232
K+ VESA+S L EV V+F V
Sbjct: 64 HKPKTALGD----FMVESAYST--LREVDTVLFMV 92
>sp|Q87LP0|ERA_VIBPA GTPase Era OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD
2210633) GN=era PE=3 SV=1
Length = 320
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 53/93 (56%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+Q + I+G PN GKS+++N ++G K++ SRK TT H ++GV T D Q DT
Sbjct: 22 ENQHCGFIAIVGRPNVGKSTLLNKILGQKISITSRKPQTTRHRIMGVDTDGDYQAIYVDT 81
Query: 195 PGLMLNKSGYSHKDVKVRVESAWSAVNLFEVLM 227
PGL + + ++ + S+ S VNL L+
Sbjct: 82 PGLHIEEKRAINRLMNRAANSSLSDVNLVFFLV 114
>sp|Q5EBA0|ERAL1_RAT GTPase Era, mitochondrial OS=Rattus norvegicus GN=Eral1 PE=2 SV=2
Length = 437
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%)
Query: 135 EDQKSVAVGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDT 194
E+ + + V ++GAPNAGKS++ N ++G KV VS+K +TT + LGV+T+ +TQ+ + DT
Sbjct: 109 ENPRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVSKKVHTTRCQALGVITEKETQVILLDT 168
Query: 195 PGLM 198
PG++
Sbjct: 169 PGII 172
>sp|Q9XCX8|ERA_PSEAE GTPase Era OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C
/ PRS 101 / LMG 12228) GN=era PE=3 SV=2
Length = 305
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N+++G K+A SRK TT H +LG+ T+ + Q DTPG L+K
Sbjct: 17 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGEVQAVYVDTPG--LHK 74
Query: 202 SG 203
SG
Sbjct: 75 SG 76
>sp|Q02HS3|ERA_PSEAB GTPase Era OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=era
PE=3 SV=1
Length = 305
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N+++G K+A SRK TT H +LG+ T+ + Q DTPG L+K
Sbjct: 17 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGEVQAVYVDTPG--LHK 74
Query: 202 SG 203
SG
Sbjct: 75 SG 76
>sp|B7UYX1|ERA_PSEA8 GTPase Era OS=Pseudomonas aeruginosa (strain LESB58) GN=era PE=3
SV=1
Length = 305
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGLMLNK 201
V I+G PN GKS+++N+++G K+A SRK TT H +LG+ T+ + Q DTPG L+K
Sbjct: 17 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGEVQAVYVDTPG--LHK 74
Query: 202 SG 203
SG
Sbjct: 75 SG 76
>sp|A5W8F1|ERA_PSEP1 GTPase Era OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=era
PE=3 SV=1
Length = 300
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
V I+G PN GKS+++N+++G K+A SRK TT H +LG+ T+ D Q DTPG+
Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGM 67
>sp|B0KV26|ERA_PSEPG GTPase Era OS=Pseudomonas putida (strain GB-1) GN=era PE=3 SV=1
Length = 300
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
V I+G PN GKS+++N+++G K+A SRK TT H +LG+ T+ D Q DTPG+
Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGM 67
>sp|Q1I5V9|ERA_PSEE4 GTPase Era OS=Pseudomonas entomophila (strain L48) GN=era PE=3 SV=1
Length = 300
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 142 VGIIGAPNAGKSSIINYMVGTKVAAVSRKTNTTTHEVLGVMTKADTQICIFDTPGL 197
V I+G PN GKS+++N+++G K+A SRK TT H +LG+ T+ D Q DTPG+
Sbjct: 12 VAIVGRPNVGKSTLLNHILGQKLAITSRKPQTTRHNMLGIKTEGDVQAIYVDTPGM 67
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.131 0.371
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,492,681
Number of Sequences: 539616
Number of extensions: 3705497
Number of successful extensions: 42781
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2063
Number of HSP's successfully gapped in prelim test: 1136
Number of HSP's that attempted gapping in prelim test: 34301
Number of HSP's gapped (non-prelim): 7201
length of query: 242
length of database: 191,569,459
effective HSP length: 114
effective length of query: 128
effective length of database: 130,053,235
effective search space: 16646814080
effective search space used: 16646814080
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)