BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026175
(242 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449463653|ref|XP_004149546.1| PREDICTED: proteasome subunit beta type-4-like [Cucumis sativus]
Length = 245
Score = 434 bits (1115), Expect = e-119, Method: Compositional matrix adjust.
Identities = 202/241 (83%), Positives = 225/241 (93%)
Query: 2 ESIQAKQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERI 61
+S QA GL+ P PIQRTQ PYVTGTSVVA+KYKDGILM +D+GGSYGST+RYKSVERI
Sbjct: 5 DSNQANHGLLCPEAPIQRTQYPYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERI 64
Query: 62 KPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNK 121
K IGKHSLLGASGEISDFQ+LLR+LD+LILYDNMWDDGN+LGPKE+HSYLTRVMYNRRNK
Sbjct: 65 KAIGKHSLLGASGEISDFQQLLRDLDQLILYDNMWDDGNALGPKEIHSYLTRVMYNRRNK 124
Query: 122 FDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYED 181
FDP WN+LVLGGVKNGQKYLG V+MIGV FED+HV TGFGNHLARPILRDEW E+L++E+
Sbjct: 125 FDPYWNALVLGGVKNGQKYLGTVNMIGVTFEDNHVTTGFGNHLARPILRDEWREDLTFEE 184
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGS 241
GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEG TISQPY+LKTFW ++AF+NPT+GAEGS
Sbjct: 185 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLKTFWNYSAFENPTSGAEGS 244
Query: 242 W 242
W
Sbjct: 245 W 245
>gi|225435249|ref|XP_002284989.1| PREDICTED: proteasome subunit beta type-4 isoform 1 [Vitis
vinifera]
gi|297746225|emb|CBI16281.3| unnamed protein product [Vitis vinifera]
Length = 245
Score = 433 bits (1114), Expect = e-119, Method: Compositional matrix adjust.
Identities = 204/225 (90%), Positives = 217/225 (96%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT PYVTGTSV+ +KYKDGILMAADMGGSYGST+RYKSVER+KPIGKHSLLGASGEIS
Sbjct: 21 QRTLYPYVTGTSVIGVKYKDGILMAADMGGSYGSTLRYKSVERMKPIGKHSLLGASGEIS 80
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+L LDELILYDNMWDDGNSLGPKE+HSYLTRVMYNRRNKF+PLWNSLVLGGVKNG
Sbjct: 81 DFQEILHYLDELILYDNMWDDGNSLGPKEVHSYLTRVMYNRRNKFNPLWNSLVLGGVKNG 140
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
QKYLG VSMIGV+FED+HVATGFGNHLARPILRDEWHE+LS+EDGVKLLEKCMRVLLYRD
Sbjct: 141 QKYLGTVSMIGVHFEDNHVATGFGNHLARPILRDEWHEDLSFEDGVKLLEKCMRVLLYRD 200
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
RSAVNKLQIAKITEEG TISQPY+LKTFWGF+AFQNPT GAEGSW
Sbjct: 201 RSAVNKLQIAKITEEGVTISQPYSLKTFWGFSAFQNPTVGAEGSW 245
>gi|224141787|ref|XP_002324245.1| predicted protein [Populus trichocarpa]
gi|222865679|gb|EEF02810.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 428 bits (1101), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/241 (82%), Positives = 224/241 (92%), Gaps = 1/241 (0%)
Query: 3 SIQAKQGLVGPNDP-IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERI 61
S + KQ + ++P IQRTQ PYVTG+SVVALKYKDGILMAADMGGSYGST+RYKSVERI
Sbjct: 4 SSETKQNSLLSSEPGIQRTQYPYVTGSSVVALKYKDGILMAADMGGSYGSTLRYKSVERI 63
Query: 62 KPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNK 121
KP+GKHSL+GASGEISDFQE++R LDE +L DNMWDDGNSLGPKE+HSYLTRVMYNRRNK
Sbjct: 64 KPVGKHSLIGASGEISDFQEIMRYLDEQVLNDNMWDDGNSLGPKEIHSYLTRVMYNRRNK 123
Query: 122 FDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYED 181
FDPLWN+L+LGGVK GQK+LGMV+MIGVNFE++HVATGFGNH+A+PILR EWHENL++E+
Sbjct: 124 FDPLWNTLLLGGVKKGQKFLGMVTMIGVNFEENHVATGFGNHMAQPILRSEWHENLTFEE 183
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGS 241
GV LLEKCMRVLLYRDRSAVNK QIAKITEEG TISQPYALKTFWGF AF+NPTAGAEGS
Sbjct: 184 GVALLEKCMRVLLYRDRSAVNKFQIAKITEEGVTISQPYALKTFWGFKAFENPTAGAEGS 243
Query: 242 W 242
W
Sbjct: 244 W 244
>gi|224089062|ref|XP_002308619.1| predicted protein [Populus trichocarpa]
gi|222854595|gb|EEE92142.1| predicted protein [Populus trichocarpa]
Length = 244
Score = 419 bits (1077), Expect = e-115, Method: Compositional matrix adjust.
Identities = 192/236 (81%), Positives = 218/236 (92%)
Query: 7 KQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGK 66
+ L+ + IQRTQ PYVTGTSVVALKYKDGILMAADMGGSYGST+RYKSVERIKP+GK
Sbjct: 9 QHTLLSSDYGIQRTQYPYVTGTSVVALKYKDGILMAADMGGSYGSTLRYKSVERIKPVGK 68
Query: 67 HSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLW 126
HS++GASGEISDFQE++R LDE +L DNMWDD NSLGPKE+HSYLTRVMYNRRNKFDPLW
Sbjct: 69 HSIIGASGEISDFQEIMRYLDEQVLNDNMWDDRNSLGPKEIHSYLTRVMYNRRNKFDPLW 128
Query: 127 NSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
N+L+LGGVK GQK+LGMV+MIGVNFE++H+ATGFGNH+A+P+LR EWHENL++E+GV LL
Sbjct: 129 NTLILGGVKKGQKFLGMVTMIGVNFEENHIATGFGNHMAQPLLRAEWHENLTFEEGVTLL 188
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
EKCMRVLLYRDRSAVNK QIAKITEEG TISQPYALKTFWG+ AF+NPT GAEGSW
Sbjct: 189 EKCMRVLLYRDRSAVNKFQIAKITEEGVTISQPYALKTFWGYKAFENPTVGAEGSW 244
>gi|297848158|ref|XP_002891960.1| hypothetical protein ARALYDRAFT_474808 [Arabidopsis lyrata subsp.
lyrata]
gi|297337802|gb|EFH68219.1| hypothetical protein ARALYDRAFT_474808 [Arabidopsis lyrata subsp.
lyrata]
Length = 246
Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust.
Identities = 191/225 (84%), Positives = 213/225 (94%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT PYVTGTS+VA+KYKDG+LMA+DMGGSYGST+RYK++ER+K IGKHSLLGASGEIS
Sbjct: 22 QRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEIS 81
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L DNMWDDGNSLGPKE+H+YLTRVMYNRRNKF+PLWN+LVLGGVKNG
Sbjct: 82 DFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGGVKNG 141
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+ YLGMVSMIGV+FED HVATGFGNHLARPILRDEWH +LS+EDGVKLLEKCMRVLLYRD
Sbjct: 142 KSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRD 201
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
RSA+NKLQIAKITEEG T+SQPY+LKTFW F++F NPTAGAEGSW
Sbjct: 202 RSAINKLQIAKITEEGVTVSQPYSLKTFWEFSSFHNPTAGAEGSW 246
>gi|3421123|gb|AAC32074.1| 20S proteasome beta subunit PBG1 [Arabidopsis thaliana]
Length = 246
Score = 412 bits (1060), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/225 (84%), Positives = 212/225 (94%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT PYVTGTSVVA+KYKDG+LMA+DMGGSYGST+RYK++ER+K IGKHSLLGASGEIS
Sbjct: 22 QRTLYPYVTGTSVVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEIS 81
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L DNMWDDGNSLGPKE+H+YLTRVMYNRRNKF+PLWN+LVLGGVKNG
Sbjct: 82 DFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGGVKNG 141
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+ YLGMVSMIGV+FED HVATGFGNHLARPILRDEWH +LS+EDGVKLLEKCMRVLLYRD
Sbjct: 142 KSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRD 201
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
RSA+NKLQIAKITEEG T+SQPY+LKT+W F++F NPTAGA GSW
Sbjct: 202 RSAINKLQIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246
>gi|15223537|ref|NP_176040.1| proteasome subunit beta type-4 [Arabidopsis thaliana]
gi|82581521|sp|Q7DLR9.2|PSB4_ARATH RecName: Full=Proteasome subunit beta type-4; AltName: Full=20S
proteasome beta subunit G-1; AltName: Full=Proteasome
component H; AltName: Full=Proteasome subunit beta
type-7; Flags: Precursor
gi|12323023|gb|AAG51500.1|AC058785_3 20S proteasome beta subunit (PBG1) [Arabidopsis thaliana]
gi|14190405|gb|AAK55683.1|AF378880_1 At1g56450/F13N6_3 [Arabidopsis thaliana]
gi|15010590|gb|AAK73954.1| At1g56450/F13N6_3 [Arabidopsis thaliana]
gi|15450551|gb|AAK96453.1| At1g56450/F13N6_3 [Arabidopsis thaliana]
gi|62320870|dbj|BAD93840.1| putative protein [Arabidopsis thaliana]
gi|332195276|gb|AEE33397.1| proteasome subunit beta type-4 [Arabidopsis thaliana]
Length = 246
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 189/225 (84%), Positives = 212/225 (94%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT PYVTGTS+VA+KYKDG+LMA+DMGGSYGST+RYK++ER+K IGKHSLLGASGEIS
Sbjct: 22 QRTLYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEIS 81
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L DNMWDDGNSLGPKE+H+YLTRVMYNRRNKF+PLWN+LVLGGVKNG
Sbjct: 82 DFQEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFNPLWNTLVLGGVKNG 141
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+ YLGMVSMIGV+FED HVATGFGNHLARPILRDEWH +LS+EDGVKLLEKCMRVLLYRD
Sbjct: 142 KSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRD 201
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
RSA+NKLQIAKITEEG T+SQPY+LKT+W F++F NPTAGA GSW
Sbjct: 202 RSAINKLQIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGSW 246
>gi|351722547|ref|NP_001235968.1| uncharacterized protein LOC100527174 [Glycine max]
gi|255631716|gb|ACU16225.1| unknown [Glycine max]
Length = 232
Score = 412 bits (1059), Expect = e-113, Method: Compositional matrix adjust.
Identities = 190/225 (84%), Positives = 214/225 (95%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
+RT PYVTG+SVVA+KYKDGILMAADMGGSYGST+RYKSVERIKPIGKHSLLGASGEIS
Sbjct: 8 ERTLYPYVTGSSVVAIKYKDGILMAADMGGSYGSTLRYKSVERIKPIGKHSLLGASGEIS 67
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDELILYDNMWDDGNSLGPKE+H+YLTRVMYNRRN+F+PLWN+LVLGGVKNG
Sbjct: 68 DFQEILRYLDELILYDNMWDDGNSLGPKEVHNYLTRVMYNRRNEFNPLWNALVLGGVKNG 127
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
QKYLGMV+MIG+NFED HVATG GNHLARPILRDEWHENL++E+GVKLLEKCMRVLLYRD
Sbjct: 128 QKYLGMVNMIGINFEDDHVATGLGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRD 187
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
RSAVNK+QI+KIT+EG T+ P++LKT+W F+AF+NPT GAE SW
Sbjct: 188 RSAVNKIQISKITDEGATVFPPFSLKTYWEFSAFKNPTVGAECSW 232
>gi|449531344|ref|XP_004172646.1| PREDICTED: proteasome subunit beta type-4-like, partial [Cucumis
sativus]
Length = 221
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/220 (86%), Positives = 211/220 (95%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
PYVTGTSVVA+KYKDGILM +D+GGSYGST+RYKSVERIK IGKHSLLGASGEISDFQ+L
Sbjct: 2 PYVTGTSVVAIKYKDGILMVSDLGGSYGSTLRYKSVERIKAIGKHSLLGASGEISDFQQL 61
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
LR+LD+LILYDNMWDDGN+LGPKE+HSYLTRVMYNRRNKFDP WN+LVLGGVKNGQKYLG
Sbjct: 62 LRDLDQLILYDNMWDDGNALGPKEIHSYLTRVMYNRRNKFDPYWNALVLGGVKNGQKYLG 121
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
V+MIGV FED+HV TGFGNHLARPILRDEW E+L++E+GVKLLEKCMRVLLYRDRSAVN
Sbjct: 122 TVNMIGVTFEDNHVTTGFGNHLARPILRDEWREDLTFEEGVKLLEKCMRVLLYRDRSAVN 181
Query: 203 KLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
KLQIAKITEEG TISQPY+LKTFW ++AF+NPT+GAEGSW
Sbjct: 182 KLQIAKITEEGVTISQPYSLKTFWNYSAFENPTSGAEGSW 221
>gi|357500387|ref|XP_003620482.1| Proteasome subunit beta type [Medicago truncatula]
gi|355495497|gb|AES76700.1| Proteasome subunit beta type [Medicago truncatula]
gi|388498504|gb|AFK37318.1| unknown [Medicago truncatula]
Length = 232
Score = 409 bits (1051), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/225 (84%), Positives = 213/225 (94%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT PYVTG+SVVA+KYKDGILMAADMGGSYGST+RYKSVER+KPIGKHSLLGASGEIS
Sbjct: 8 QRTLYPYVTGSSVVAIKYKDGILMAADMGGSYGSTLRYKSVERLKPIGKHSLLGASGEIS 67
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE++R LDELIL DNMWDDGNSLGPKE+H+YLTRVMYNRRNKF+PLWNSLVLGGVK G
Sbjct: 68 DFQEIMRYLDELILIDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLVLGGVKKG 127
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
QKYLG VSMIGVN+ED+HVATG GNHLARPILRDEW+ENL++E+GVKLLEKCMRVLLYRD
Sbjct: 128 QKYLGTVSMIGVNYEDNHVATGLGNHLARPILRDEWNENLTFEEGVKLLEKCMRVLLYRD 187
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
RSAVNK+QI+KITEEG T+ P++LKT+W F+AF+NPT GAEGSW
Sbjct: 188 RSAVNKIQISKITEEGATVYPPFSLKTYWEFSAFKNPTVGAEGSW 232
>gi|388494400|gb|AFK35266.1| unknown [Medicago truncatula]
Length = 232
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/225 (83%), Positives = 212/225 (94%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT PYVTG+SVVA+KYKDGILMA+DMGGSYGST+RYKSVER+KPIGKHSL+GASGEIS
Sbjct: 8 QRTLYPYVTGSSVVAIKYKDGILMASDMGGSYGSTLRYKSVERVKPIGKHSLIGASGEIS 67
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+ R LDELIL DNMWDDGNSLGPKE+H+YLTRVMYNRRNKF+PLWNSLVLGGVKNG
Sbjct: 68 DFQEIQRYLDELILTDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLVLGGVKNG 127
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
QKYLG V+MIG+N+ED H+ATG GNHLARPILRDEWHENLS+E+GVKLLEKCMRVLLYRD
Sbjct: 128 QKYLGTVNMIGINYEDDHIATGLGNHLARPILRDEWHENLSFEEGVKLLEKCMRVLLYRD 187
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
RSAVNK+QIAK+TEEG T+ P++LKT+W F+AF+NPT GAEGSW
Sbjct: 188 RSAVNKIQIAKMTEEGATMFPPFSLKTYWEFSAFKNPTVGAEGSW 232
>gi|383100954|emb|CCD74498.1| proteasome subunit beta type-4 [Arabidopsis halleri subsp. halleri]
Length = 289
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/222 (84%), Positives = 210/222 (94%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
+ PYVTGTS+VA+KYKDG+LMA+DMGGSYGST+RYK++ER+K IGKHSLLGASGEISDF
Sbjct: 49 VRYPYVTGTSIVAIKYKDGVLMASDMGGSYGSTLRYKNIERVKAIGKHSLLGASGEISDF 108
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
QE+LR LDEL L DNMWDDGNSLGPKE+H+YLTRVMYNRRNKFDPLWN+LVLGGVKNG+
Sbjct: 109 QEILRYLDELTLNDNMWDDGNSLGPKEIHNYLTRVMYNRRNKFDPLWNTLVLGGVKNGKS 168
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
YLGMVSMIGV+FED HVATGFGNHLARPILRDEWH +LS+EDGVKLLEKCMRVLLYRDRS
Sbjct: 169 YLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFEDGVKLLEKCMRVLLYRDRS 228
Query: 200 AVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGS 241
A+NKLQIAKITEEG T+SQPY+LKTFW F++F NPTAGAEGS
Sbjct: 229 AINKLQIAKITEEGVTVSQPYSLKTFWEFSSFHNPTAGAEGS 270
>gi|351727967|ref|NP_001236155.1| uncharacterized protein LOC100499795 [Glycine max]
gi|255626665|gb|ACU13677.1| unknown [Glycine max]
Length = 233
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 188/222 (84%), Positives = 212/222 (95%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
+RT PYVTG+SVVA+KYKDGILMAADMGGSYGST+RYKSVERIKPIGKHSLLGASGEIS
Sbjct: 8 ERTLYPYVTGSSVVAIKYKDGILMAADMGGSYGSTLRYKSVERIKPIGKHSLLGASGEIS 67
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDELILYDNMW+DGNSLGPKE+H+YLTRVMYNRRNKF+PLWN+LVLGGVKNG
Sbjct: 68 DFQEILRYLDELILYDNMWEDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNALVLGGVKNG 127
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
QKYLGMV+MIG+NFED+HVATG GNHLARPILRDEWHENL++E+GVKLLEKCMRVLLYRD
Sbjct: 128 QKYLGMVNMIGINFEDNHVATGLGNHLARPILRDEWHENLTFEEGVKLLEKCMRVLLYRD 187
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAE 239
RSAVNK+QI+KIT+EG T+ P++LKT+W F AF+NPT GAE
Sbjct: 188 RSAVNKIQISKITDEGATVFPPFSLKTYWEFAAFKNPTVGAE 229
>gi|297843714|ref|XP_002889738.1| 20S proteasome beta subunit PBG1 [Arabidopsis lyrata subsp. lyrata]
gi|297335580|gb|EFH65997.1| 20S proteasome beta subunit PBG1 [Arabidopsis lyrata subsp. lyrata]
Length = 245
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/242 (78%), Positives = 217/242 (89%)
Query: 1 MESIQAKQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVER 60
M I+ G+ QRT PYVTGTSVVA+KYKDGILMA+DMGGSYGST+RYK++ER
Sbjct: 4 MIPIENGNGVKNAEADSQRTLYPYVTGTSVVAIKYKDGILMASDMGGSYGSTLRYKNIER 63
Query: 61 IKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRN 120
+K IGKHSLLGASGEISDFQE+LR LDEL+L DNMWDDGNSLGPKE+ +YLTRV+YNRRN
Sbjct: 64 MKAIGKHSLLGASGEISDFQEILRYLDELMLNDNMWDDGNSLGPKEVLNYLTRVVYNRRN 123
Query: 121 KFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYE 180
KF+PLWN+LV+GGVK G+KYLGMVSMIGV+FED+HVATGFGNHLARPILRDEW E+LS+E
Sbjct: 124 KFNPLWNTLVVGGVKYGEKYLGMVSMIGVSFEDNHVATGFGNHLARPILRDEWREDLSFE 183
Query: 181 DGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEG 240
+GVKLLEKCMRVLLYRDRSA+NKLQIAK+TEEG T+S+PY+LKTFW F AF NPT GAEG
Sbjct: 184 EGVKLLEKCMRVLLYRDRSAINKLQIAKMTEEGVTVSEPYSLKTFWDFKAFTNPTVGAEG 243
Query: 241 SW 242
SW
Sbjct: 244 SW 245
>gi|217072746|gb|ACJ84733.1| unknown [Medicago truncatula]
Length = 249
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 187/222 (84%), Positives = 210/222 (94%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT PYVTG+SVVA+KYKDGILMAADMGGSYGST+RYKSVER+KPIGKHSLLGASGEIS
Sbjct: 8 QRTLYPYVTGSSVVAIKYKDGILMAADMGGSYGSTLRYKSVERLKPIGKHSLLGASGEIS 67
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE++R LDELIL DNMWDDGNSLGPKE+H+YLTRVMYNRRNKF+PLWNSLVLGGVK G
Sbjct: 68 DFQEIMRYLDELILIDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLVLGGVKKG 127
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
QKYLG VSMIGVN+ED+HVATG GNHLARPILRDEW+ENL++E+GVKLLEKCMRVLLYRD
Sbjct: 128 QKYLGTVSMIGVNYEDNHVATGLGNHLARPILRDEWNENLTFEEGVKLLEKCMRVLLYRD 187
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAE 239
RSAVNK+QI+KITEEG T+ P++LKT+W F+AF+NPT GAE
Sbjct: 188 RSAVNKIQISKITEEGATVYPPFSLKTYWEFSAFKNPTVGAE 229
>gi|224284230|gb|ACN39851.1| unknown [Picea sitchensis]
Length = 262
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/229 (79%), Positives = 210/229 (91%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N PI TQ PYVTGTSV+ +KYKDG+L+A+DMGGSYGST+RYKSV+R+KPIGKH+LLGA
Sbjct: 34 NSPISHTQYPYVTGTSVLGIKYKDGVLLASDMGGSYGSTLRYKSVQRLKPIGKHTLLGAG 93
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
GEISDFQE++R LDELILYDNMWDDGNSLGPKE+H+YL R+MYNRRNKF+PLWN+LVLGG
Sbjct: 94 GEISDFQEIVRYLDELILYDNMWDDGNSLGPKEVHNYLNRLMYNRRNKFNPLWNTLVLGG 153
Query: 134 VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL 193
VKNGQKYLG V+MIGV++E++HVATGFGNHLARPI RDEWHE++++E+GVKLLEKCM VL
Sbjct: 154 VKNGQKYLGTVNMIGVHYEENHVATGFGNHLARPIFRDEWHEDMTFEEGVKLLEKCMLVL 213
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRDRSAVNKLQIAKITEEG TIS+PYA+KT W AF+NP GA GSW
Sbjct: 214 LYRDRSAVNKLQIAKITEEGATISEPYAIKTHWELEAFKNPATGAVGSW 262
>gi|116779331|gb|ABK21241.1| unknown [Picea sitchensis]
gi|116786508|gb|ABK24134.1| unknown [Picea sitchensis]
gi|224284030|gb|ACN39753.1| unknown [Picea sitchensis]
Length = 262
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/229 (79%), Positives = 210/229 (91%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N PI TQ PYVTGTSV+ +KYKDG+L+A+DMGGSYGST+RYKSV+R+KPIGKH+LLGA
Sbjct: 34 NSPISHTQYPYVTGTSVLGIKYKDGVLLASDMGGSYGSTLRYKSVQRLKPIGKHTLLGAG 93
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
GEISDFQE++R LDELILYDNMWDDGNSLGPKE+H+YL R+MYNRRNKF+PLWN+LVLGG
Sbjct: 94 GEISDFQEIVRYLDELILYDNMWDDGNSLGPKEVHNYLNRLMYNRRNKFNPLWNTLVLGG 153
Query: 134 VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL 193
VKNGQKYLG V+MIGV++E++HVATGFGNHLARPI RDEWHE++++E+GVKLLEKCM VL
Sbjct: 154 VKNGQKYLGTVNMIGVHYEENHVATGFGNHLARPIFRDEWHEDMTFEEGVKLLEKCMLVL 213
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRDRSAVNKLQIAKITEEG TIS+PYA+KT W AF+NP GA GSW
Sbjct: 214 LYRDRSAVNKLQIAKITEEGATISEPYAIKTHWELEAFKNPATGAVGSW 262
>gi|357472345|ref|XP_003606457.1| Proteasome subunit beta type [Medicago truncatula]
gi|355507512|gb|AES88654.1| Proteasome subunit beta type [Medicago truncatula]
Length = 267
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 188/260 (72%), Positives = 212/260 (81%), Gaps = 35/260 (13%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT PYVTG+SVVA+KYKDGILMA+DMGGSYGST+RYKSVER+KPIGKHSL+GASGEIS
Sbjct: 8 QRTLYPYVTGSSVVAIKYKDGILMASDMGGSYGSTLRYKSVERVKPIGKHSLIGASGEIS 67
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+ R LDELIL DNMWDDGNSLGPKE+H+YLTRVMYNRRNKF+PLWNSLVLGGVKNG
Sbjct: 68 DFQEIQRYLDELILTDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLVLGGVKNG 127
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
QKYLG V+MIG+N+ED H+ATG GNHLARPILRDEWHENLS+E+GVKLLEKCMRVLLYRD
Sbjct: 128 QKYLGTVNMIGINYEDDHIATGLGNHLARPILRDEWHENLSFEEGVKLLEKCMRVLLYRD 187
Query: 198 RSAVNKLQ-----------------------------------IAKITEEGTTISQPYAL 222
RSAVNK+Q IAK+TEEG T+ P++L
Sbjct: 188 RSAVNKIQKDWILNPLRTGKSPILVATNVTARSLEPTYAHIFTIAKMTEEGATMFPPFSL 247
Query: 223 KTFWGFTAFQNPTAGAEGSW 242
KT+W F+AF+NPT GAEGSW
Sbjct: 248 KTYWEFSAFKNPTVGAEGSW 267
>gi|242049832|ref|XP_002462660.1| hypothetical protein SORBIDRAFT_02g029840 [Sorghum bicolor]
gi|241926037|gb|EER99181.1| hypothetical protein SORBIDRAFT_02g029840 [Sorghum bicolor]
Length = 263
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 173/229 (75%), Positives = 201/229 (87%), Gaps = 4/229 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRTQ PYVTGTSV+ALKYKDG++MA D G SYGST+RYKSVERIK +GKHS++GASGE S
Sbjct: 35 QRTQYPYVTGTSVIALKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSIIGASGEYS 94
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L D+MWDDGNSLGPKE+HSYLTRVMYNRRNKFDPLWNSLVLGGVK G
Sbjct: 95 DFQEILRYLDELTLSDHMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKG 154
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL 193
+KYLGMV+MIG +FE++HVATGFGNHLA PILR EW E++++E+ VKL+EKC+ VL
Sbjct: 155 PKGDEKYLGMVNMIGTHFEENHVATGFGNHLAIPILRAEWREDMTFEEAVKLVEKCLLVL 214
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRDRS++NK QIAKIT EG+TI PY+LKT+WGFT F+NP GA GSW
Sbjct: 215 LYRDRSSINKFQIAKITTEGSTIYPPYSLKTYWGFTHFENPAQGAVGSW 263
>gi|115480143|ref|NP_001063665.1| Os09g0515200 [Oryza sativa Japonica Group]
gi|8671512|dbj|BAA96839.1| beta 7 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|50725360|dbj|BAD34432.1| beta 7 subunit of 20S proteasome [Oryza sativa Japonica Group]
gi|113631898|dbj|BAF25579.1| Os09g0515200 [Oryza sativa Japonica Group]
gi|215678922|dbj|BAG96352.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215679368|dbj|BAG96508.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215701038|dbj|BAG92462.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 256
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/229 (73%), Positives = 201/229 (87%), Gaps = 4/229 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRTQ PYVTG+S++ALKYKDG++MA+D G SYGST+RYKSVERIK +GKHSL+GASGE S
Sbjct: 28 QRTQYPYVTGSSIIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHSLIGASGEFS 87
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L D+MWDDGNSLGPKE+HSYLTRVMYNRRNKFDPLWNSLV+GGVK G
Sbjct: 88 DFQEILRYLDELTLSDHMWDDGNSLGPKEVHSYLTRVMYNRRNKFDPLWNSLVIGGVKKG 147
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL 193
+KYLGMV+MIG +FE++H+ATGFGNH+A PILR EW E++++E+ VKL+EKC+ VL
Sbjct: 148 PKGEEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRTEWREDMTFEEAVKLVEKCLLVL 207
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRDRS++NK QIAKIT EG TI PY+LKT+WGF AF+NP GA GSW
Sbjct: 208 LYRDRSSINKFQIAKITTEGATIYPPYSLKTYWGFAAFENPAQGAVGSW 256
>gi|222641915|gb|EEE70047.1| hypothetical protein OsJ_30005 [Oryza sativa Japonica Group]
Length = 265
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/229 (73%), Positives = 201/229 (87%), Gaps = 4/229 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRTQ PYVTG+S++ALKYKDG++MA+D G SYGST+RYKSVERIK +GKHSL+GASGE S
Sbjct: 37 QRTQYPYVTGSSIIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHSLIGASGEFS 96
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L D+MWDDGNSLGPKE+HSYLTRVMYNRRNKFDPLWNSLV+GGVK G
Sbjct: 97 DFQEILRYLDELTLSDHMWDDGNSLGPKEVHSYLTRVMYNRRNKFDPLWNSLVIGGVKKG 156
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL 193
+KYLGMV+MIG +FE++H+ATGFGNH+A PILR EW E++++E+ VKL+EKC+ VL
Sbjct: 157 PKGEEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRTEWREDMTFEEAVKLVEKCLLVL 216
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRDRS++NK QIAKIT EG TI PY+LKT+WGF AF+NP GA GSW
Sbjct: 217 LYRDRSSINKFQIAKITTEGATIYPPYSLKTYWGFAAFENPAQGAVGSW 265
>gi|218202454|gb|EEC84881.1| hypothetical protein OsI_32035 [Oryza sativa Indica Group]
Length = 262
Score = 370 bits (949), Expect = e-100, Method: Compositional matrix adjust.
Identities = 169/229 (73%), Positives = 201/229 (87%), Gaps = 4/229 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRTQ PYVTG+S++ALKYKDG++MA+D G SYGST+RYKSVERIK +GKHSL+GASGE S
Sbjct: 34 QRTQYPYVTGSSIIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHSLIGASGEFS 93
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L D+MWDDGNSLGPKE+HSYLTRVMYNRRNKFDPLWNSLV+GGVK G
Sbjct: 94 DFQEILRYLDELTLSDHMWDDGNSLGPKEVHSYLTRVMYNRRNKFDPLWNSLVIGGVKKG 153
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL 193
+KYLGMV+MIG +FE++H+ATGFGNH+A PILR EW E++++E+ VKL+EKC+ VL
Sbjct: 154 PKGEEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRTEWREDMTFEEAVKLVEKCLLVL 213
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRDRS++NK QIAKIT EG TI PY+LKT+WGF AF+NP GA GSW
Sbjct: 214 LYRDRSSINKFQIAKITTEGATIYPPYSLKTYWGFAAFENPAQGAVGSW 262
>gi|212723668|ref|NP_001131526.1| proteasome subunit beta type [Zea mays]
gi|194691764|gb|ACF79966.1| unknown [Zea mays]
gi|414589967|tpg|DAA40538.1| TPA: proteasome subunit beta type [Zea mays]
Length = 263
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/229 (74%), Positives = 200/229 (87%), Gaps = 4/229 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRTQ PYVTGTSV+ALKYKDG++MA D G SYGST+RYKSVERIK +GKHS++GASGE S
Sbjct: 35 QRTQYPYVTGTSVIALKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSIIGASGEFS 94
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L D+MWDDGNSLGPKE+HSYLTRVMYNRRNKFDPLWNSLVLGGVK G
Sbjct: 95 DFQEILRYLDELTLSDHMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKG 154
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL 193
+KYLGMV+MIG +FE++HVATGF NHLA PILR EW E++++E+ VKL+EKC+ VL
Sbjct: 155 PKGDEKYLGMVNMIGTHFEENHVATGFANHLAIPILRAEWREDMTFEEAVKLVEKCLLVL 214
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRDRS++NK QIAKIT EG+TI PY+LKT+WGF+ F+NP GA GSW
Sbjct: 215 LYRDRSSINKFQIAKITTEGSTIYPPYSLKTYWGFSHFENPAQGAVGSW 263
>gi|195639560|gb|ACG39248.1| proteasome subunit beta type 4 precursor [Zea mays]
Length = 263
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 171/229 (74%), Positives = 200/229 (87%), Gaps = 4/229 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRTQ PYVTGTSV+ALKYKDG++MA D G SYGST+RYKSVERIK +GKHS++GASGE S
Sbjct: 35 QRTQYPYVTGTSVIALKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSIIGASGEFS 94
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L D+MWDDGNSLGPKE+HSYLTRVMYNRRNKFDPLWNSLVLGGVK G
Sbjct: 95 DFQEILRYLDELTLSDHMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKG 154
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL 193
+KYLGMV+MIG +FE++HVATGF NHLA PILR EW E++++E+ VKL+EKC+ VL
Sbjct: 155 PKGDEKYLGMVNMIGTHFEENHVATGFANHLAIPILRAEWREDMTFEEAVKLVEKCLLVL 214
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRDRS++NK QIAKIT EG+TI PY+LKT+WGF+ F+NP GA GSW
Sbjct: 215 LYRDRSSINKFQIAKITTEGSTIYPPYSLKTYWGFSHFENPAQGAVGSW 263
>gi|195623820|gb|ACG33740.1| proteasome subunit beta type 4 precursor [Zea mays]
Length = 263
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 170/229 (74%), Positives = 200/229 (87%), Gaps = 4/229 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRTQ PYVTG SV+ALKYKDG++MA D G SYGST+RYKSVERIK +GKHS++GASGE S
Sbjct: 35 QRTQYPYVTGNSVIALKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSIIGASGEFS 94
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L D+MWDDGNSLGPKE+HSYLTRVMYNRRNKFDPLWNSLVLGGVK G
Sbjct: 95 DFQEILRYLDELTLSDHMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKG 154
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL 193
+KYLGMV+MIG +FE++HVATGFGNH+A PILR EW +++++E+ VKL+EKC+ VL
Sbjct: 155 PKGDEKYLGMVNMIGTHFEENHVATGFGNHMAIPILRAEWRDDMTFEEAVKLVEKCLVVL 214
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRDRS++NK QIAKIT EG+TI PY+LKT+WGFT F+NP GA GSW
Sbjct: 215 LYRDRSSINKFQIAKITSEGSTIYPPYSLKTYWGFTHFENPAQGAVGSW 263
>gi|226502132|ref|NP_001150351.1| proteasome subunit beta type 4 [Zea mays]
gi|194698860|gb|ACF83514.1| unknown [Zea mays]
gi|195638598|gb|ACG38767.1| proteasome subunit beta type 4 precursor [Zea mays]
gi|414886263|tpg|DAA62277.1| TPA: proteasome subunit beta type isoform 1 [Zea mays]
gi|414886264|tpg|DAA62278.1| TPA: proteasome subunit beta type isoform 2 [Zea mays]
Length = 263
Score = 367 bits (943), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 170/229 (74%), Positives = 200/229 (87%), Gaps = 4/229 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRTQ PYVTG SV+ALKYKDG++MA D G SYGST+RYKSVERIK +GKHS++GASGE S
Sbjct: 35 QRTQYPYVTGNSVIALKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSIIGASGEFS 94
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L D+MWDDGNSLGPKE+HSYLTRVMYNRRNKFDPLWNSLVLGGVK G
Sbjct: 95 DFQEILRYLDELTLSDHMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKG 154
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL 193
+KYLGMV+MIG +FE++HVATGFGNH+A PILR EW +++++E+ VKL+EKC+ VL
Sbjct: 155 PKGDEKYLGMVNMIGTHFEENHVATGFGNHMAIPILRAEWRDDMTFEEAVKLVEKCLVVL 214
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRDRS++NK QIAKIT EG+TI PY+LKT+WGFT F+NP GA GSW
Sbjct: 215 LYRDRSSINKFQIAKITSEGSTIYPPYSLKTYWGFTHFENPAQGAVGSW 263
>gi|194699980|gb|ACF84074.1| unknown [Zea mays]
Length = 263
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 170/229 (74%), Positives = 199/229 (86%), Gaps = 4/229 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRTQ PYVTG SV+ALKYKDG++MA D G SYGST+RYKSVERIK +GKHS++GASGE S
Sbjct: 35 QRTQYPYVTGNSVIALKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSIIGASGEFS 94
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L D+MWDDGNSLGPKE+HSYLTRVMYNRRNKFDPLWNSLVLGGVK G
Sbjct: 95 DFQEILRYLDELTLSDHMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKG 154
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL 193
+KYLGMV+MIG +FE+ HVATGFGNH+A PILR EW +++++E+ VKL+EKC+ VL
Sbjct: 155 PKGDEKYLGMVNMIGTHFEEDHVATGFGNHMAIPILRAEWRDDMTFEEAVKLVEKCLVVL 214
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRDRS++NK QIAKIT EG+TI PY+LKT+WGFT F+NP GA GSW
Sbjct: 215 LYRDRSSINKFQIAKITSEGSTIYPPYSLKTYWGFTHFENPAQGAVGSW 263
>gi|357159415|ref|XP_003578440.1| PREDICTED: proteasome subunit beta type-4-like [Brachypodium
distachyon]
Length = 247
Score = 363 bits (932), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 167/229 (72%), Positives = 199/229 (86%), Gaps = 4/229 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT PYVTG SV+A+KYKDG++MA D G SYGST+RYKSVERIK +GKHSL+G SGE S
Sbjct: 19 QRTLYPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSLIGGSGEFS 78
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L D+MWDDGNSLGPKE+H+YLTRVMYNRRNKFDPLWNSLVLGGVK G
Sbjct: 79 DFQEILRYLDELTLSDHMWDDGNSLGPKEIHAYLTRVMYNRRNKFDPLWNSLVLGGVKKG 138
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL 193
+KYLGMV+MIG +FED+H+ATGFGNH+A PILR EW E++++E+ +KL+EKC+ VL
Sbjct: 139 PKGDEKYLGMVNMIGTHFEDNHLATGFGNHMAIPILRAEWREDMTFEEAIKLIEKCLLVL 198
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRDRS++NK QIAKIT EG+TI PYALKT WGF+AF+NP+ GA G+W
Sbjct: 199 LYRDRSSINKFQIAKITTEGSTIYPPYALKTNWGFSAFENPSKGAVGTW 247
>gi|357500389|ref|XP_003620483.1| Proteasome subunit beta type [Medicago truncatula]
gi|355495498|gb|AES76701.1| Proteasome subunit beta type [Medicago truncatula]
Length = 206
Score = 352 bits (904), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 168/199 (84%), Positives = 184/199 (92%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT PYVTG+SVVA+KYKDGILMAADMGGSYGST+RYKSVER+KPIGKHSLLGASGEIS
Sbjct: 8 QRTLYPYVTGSSVVAIKYKDGILMAADMGGSYGSTLRYKSVERLKPIGKHSLLGASGEIS 67
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE++R LDELIL DNMWDDGNSLGPKE+H+YLTRVMYNRRNKF+PLWNSLVLGGVK G
Sbjct: 68 DFQEIMRYLDELILIDNMWDDGNSLGPKEVHNYLTRVMYNRRNKFNPLWNSLVLGGVKKG 127
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
QKYLG VSMIGVN+ED+HVATG GNHLARPILRDEW+ENL++E+GVKLLEKCMRVLLYRD
Sbjct: 128 QKYLGTVSMIGVNYEDNHVATGLGNHLARPILRDEWNENLTFEEGVKLLEKCMRVLLYRD 187
Query: 198 RSAVNKLQIAKITEEGTTI 216
RSAVNK+Q T G I
Sbjct: 188 RSAVNKIQGWACTHRGKVI 206
>gi|302817682|ref|XP_002990516.1| hypothetical protein SELMODRAFT_272144 [Selaginella moellendorffii]
gi|300141684|gb|EFJ08393.1| hypothetical protein SELMODRAFT_272144 [Selaginella moellendorffii]
Length = 256
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 156/226 (69%), Positives = 192/226 (84%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
I+RTQ PYVTG+SV+ +KYKDGIL+AADM SYGST RYKS +R+KP+GKH+++GASGE+
Sbjct: 31 IERTQYPYVTGSSVLGIKYKDGILLAADMAASYGSTKRYKSFQRLKPVGKHAVIGASGEM 90
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
SDFQ++ LDEL L D MWDD N+LGP E+HSYL R+MY RRNKFDPLWN+++LGGVKN
Sbjct: 91 SDFQQISTMLDELTLRDQMWDDSNTLGPHEIHSYLNRIMYQRRNKFDPLWNNIILGGVKN 150
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
G+KYLG+VSMIGV+FED HVATGFG HLARP LR +W +++ E+GV+LLEKC+ VL YR
Sbjct: 151 GKKYLGVVSMIGVHFEDDHVATGFGQHLARPELRKQWRADMTLEEGVRLLEKCLLVLYYR 210
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
DRS++NK QIAK+TEEG TIS P+A++T W AFQNPT AEGSW
Sbjct: 211 DRSSINKYQIAKVTEEGVTISSPFAIETNWDLEAFQNPTKNAEGSW 256
>gi|302803979|ref|XP_002983742.1| hypothetical protein SELMODRAFT_271646 [Selaginella moellendorffii]
gi|300148579|gb|EFJ15238.1| hypothetical protein SELMODRAFT_271646 [Selaginella moellendorffii]
Length = 256
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 156/226 (69%), Positives = 192/226 (84%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
I+RTQ PYVTG+SV+ +KYKDGIL+AADM SYGST RYKS +R+KP+GKH+++GASGE+
Sbjct: 31 IERTQYPYVTGSSVLGIKYKDGILLAADMAASYGSTKRYKSFQRLKPVGKHAVIGASGEM 90
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
SDFQ++ LDEL L D MWDD N+LGP E+HSYL R+MY RRNKFDPLWN+++LGGVKN
Sbjct: 91 SDFQQISTMLDELTLRDQMWDDSNTLGPHEIHSYLNRIMYQRRNKFDPLWNNIILGGVKN 150
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
G+KYLG+VSMIGV+FED HVATGFG HLARP LR +W +++ E+GV+LLEKC+ VL YR
Sbjct: 151 GKKYLGVVSMIGVHFEDDHVATGFGQHLARPELRKQWRADMTLEEGVRLLEKCLLVLYYR 210
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
DRS++NK QIAK+TEEG TIS P+A++T W AFQNPT AEGSW
Sbjct: 211 DRSSINKYQIAKVTEEGVTISSPFAIETNWELEAFQNPTKNAEGSW 256
>gi|116787838|gb|ABK24661.1| unknown [Picea sitchensis]
Length = 198
Score = 350 bits (897), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 160/198 (80%), Positives = 184/198 (92%)
Query: 45 MGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGP 104
MGGSYGST+RYKSV+R+KPIGKH+LLGA GEISDFQE++R LDELILYDNMWDDGNSLGP
Sbjct: 1 MGGSYGSTLRYKSVQRLKPIGKHTLLGAGGEISDFQEIVRYLDELILYDNMWDDGNSLGP 60
Query: 105 KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHL 164
KE+H+YL R+MYNRRNKF+PLWN+LVLGGVKNGQKYLG V+MIGV++E++HVATGFGNHL
Sbjct: 61 KEVHNYLNRLMYNRRNKFNPLWNTLVLGGVKNGQKYLGTVNMIGVHYEENHVATGFGNHL 120
Query: 165 ARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT 224
ARPI RDEWHE++++E+GVKLLEKCM VLLYRDRSAVNKLQIAKITEEG TIS+PYA+KT
Sbjct: 121 ARPIFRDEWHEDMTFEEGVKLLEKCMLVLLYRDRSAVNKLQIAKITEEGATISEPYAIKT 180
Query: 225 FWGFTAFQNPTAGAEGSW 242
W AF+NP GA GSW
Sbjct: 181 HWELEAFKNPATGAVGSW 198
>gi|167998983|ref|XP_001752197.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696592|gb|EDQ82930.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 273
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 156/230 (67%), Positives = 190/230 (82%)
Query: 13 PNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGA 72
P P + T+ PYVTGTSV+ +KYKDG+L+A+D SYGST+RYKSV+R+K +GK + LGA
Sbjct: 44 PEAPSKHTKYPYVTGTSVLGVKYKDGVLLASDTAASYGSTVRYKSVQRLKAVGKTTALGA 103
Query: 73 SGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
SGEISDFQ + LD+LI D MWDDGN+LGP E+H+YL R+MY RRNKFDPLWNSLVLG
Sbjct: 104 SGEISDFQAINELLDQLITNDYMWDDGNNLGPVEIHNYLNRLMYGRRNKFDPLWNSLVLG 163
Query: 133 GVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRV 192
GVKNGQ+YLG+V+MIGV++ D HVATGFGNHLARPI RDEW ++++E+ V LLEKCM V
Sbjct: 164 GVKNGQQYLGVVTMIGVHYVDDHVATGFGNHLARPIFRDEWRADMTHEEAVALLEKCMLV 223
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
L YRDRSA+NK QIA +TE G IS+PYAL+T W + AF+NPTAGA GSW
Sbjct: 224 LFYRDRSAINKFQIANVTEAGVHISEPYALQTNWSYKAFENPTAGAVGSW 273
>gi|255570823|ref|XP_002526364.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223534323|gb|EEF36035.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 290
Score = 329 bits (844), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 171/261 (65%), Positives = 188/261 (72%), Gaps = 55/261 (21%)
Query: 1 MESIQAKQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVER 60
ME+ + Q L GP +RT PYVTGTSVVALKYKDGILMAADMG SYGST+RYKSVER
Sbjct: 5 METSEPAQ-LSGPESASERTLYPYVTGTSVVALKYKDGILMAADMGASYGSTLRYKSVER 63
Query: 61 IKPIGKHSLLGASGEISDFQELLRNLD--------------------------------- 87
IKPIGKHSLLGASGEISDFQE+LR LD
Sbjct: 64 IKPIGKHSLLGASGEISDFQEILRYLDELIFYCIMKLPASYGSTLRYKSVERIKPIGKHS 123
Query: 88 ------------ELILY---------DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLW 126
E++ Y DNMWDDGNSLGPKE+H+YL RVMYNRRNKF+PLW
Sbjct: 124 LLGASGEISDFQEILRYLDELIPKPDDNMWDDGNSLGPKEVHNYLKRVMYNRRNKFNPLW 183
Query: 127 NSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
NS+VLGGVKNGQKYLG VSMIGVN+ED+HVATGFGNH A P+LRDEWHENLS+EDGVKLL
Sbjct: 184 NSVVLGGVKNGQKYLGTVSMIGVNYEDNHVATGFGNHFAWPLLRDEWHENLSFEDGVKLL 243
Query: 187 EKCMRVLLYRDRSAVNKLQIA 207
E CMRVLLYRDRSAVNKLQ++
Sbjct: 244 ENCMRVLLYRDRSAVNKLQVS 264
>gi|168000352|ref|XP_001752880.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696043|gb|EDQ82384.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 224
Score = 323 bits (828), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 147/220 (66%), Positives = 183/220 (83%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
PYVTGTSV+ L Y+ G+L+AAD GSYGST R+KSVER+K + ++LLGASGEISDFQ +
Sbjct: 5 PYVTGTSVLGLIYEGGVLIAADTAGSYGSTTRFKSVERMKAVSNNTLLGASGEISDFQAI 64
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
+ LD LI+ D MWDDGN LGP ++H+YLTRVMYNRRNKFDPLWN+L+LGGVKNG K+LG
Sbjct: 65 TQLLDRLIVADAMWDDGNDLGPLDIHNYLTRVMYNRRNKFDPLWNTLILGGVKNGVKHLG 124
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
VSMIGV++ D+H+ATGFG HLA+PI R+EW EN++ E+G +LLEK + VL YRDRSA+N
Sbjct: 125 SVSMIGVHYVDNHIATGFGIHLAQPIFREEWKENMTLEEGTRLLEKALLVLFYRDRSAIN 184
Query: 203 KLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
K+Q+A +TE+G ISQPYALK+ W AF+NPTA A GSW
Sbjct: 185 KIQVANVTEDGVHISQPYALKSEWNLEAFKNPTASAAGSW 224
>gi|52548242|gb|AAU82108.1| 20S proteasome beta 7 subunit [Triticum aestivum]
Length = 215
Score = 293 bits (749), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 143/229 (62%), Positives = 171/229 (74%), Gaps = 32/229 (13%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT PYVTG SV+A+KYKDG++MA D G SYGST+RYKSVERIK +GKHSL+G SGE S
Sbjct: 15 QRTLNPYVTGNSVIAMKYKDGVIMACDTGASYGSTLRYKSVERIKEVGKHSLIGGSGEFS 74
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL RNKFDPLWNSLVLGGVK G
Sbjct: 75 DFQEILRYLDELT----------------------------RNKFDPLWNSLVLGGVKKG 106
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL 193
+KYLGMV+MIG +FE++H+ATGFGNH+A PILR EW E++++E+ VKL+EKC+ VL
Sbjct: 107 PKGDEKYLGMVNMIGTHFEENHIATGFGNHMAIPILRGEWREDMTFEEAVKLIEKCLLVL 166
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRDRS++NK QIAKIT EG+TI PYALKT WGF AF+NP+ GA G+W
Sbjct: 167 LYRDRSSINKFQIAKITTEGSTIYPPYALKTNWGFAAFENPSKGAVGTW 215
>gi|255570811|ref|XP_002526358.1| proteasome subunit beta type, putative [Ricinus communis]
gi|223534317|gb|EEF36029.1| proteasome subunit beta type, putative [Ricinus communis]
Length = 193
Score = 291 bits (746), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 146/190 (76%), Positives = 158/190 (83%), Gaps = 14/190 (7%)
Query: 1 MESIQAKQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVER 60
ME+ + Q L GP +RT PYVTGTSVVALKYKDGILMAADMG SYGST+RYKSVER
Sbjct: 5 METSEPAQ-LSGPESASERTLYPYVTGTSVVALKYKDGILMAADMGASYGSTLRYKSVER 63
Query: 61 IKPIGKHSLLGASGEISDFQELLRNLDELILY-------------DNMWDDGNSLGPKEL 107
IKPIGKHSLLGASGEISDFQE+LR LDELI DNMWDDGNSLGPKE+
Sbjct: 64 IKPIGKHSLLGASGEISDFQEILRYLDELIWEVVLICIACSPKPDDNMWDDGNSLGPKEV 123
Query: 108 HSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARP 167
H+YL RVMYNRRNKF+PLWNS+VLGGVKNGQKYLG VSMIGVN+ED+HVATGFGNH A P
Sbjct: 124 HNYLKRVMYNRRNKFNPLWNSVVLGGVKNGQKYLGTVSMIGVNYEDNHVATGFGNHFAWP 183
Query: 168 ILRDEWHENL 177
+LRDEWHENL
Sbjct: 184 LLRDEWHENL 193
>gi|343172914|gb|AEL99160.1| proteasome subunit beta, partial [Silene latifolia]
Length = 154
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 129/154 (83%), Positives = 143/154 (92%)
Query: 89 LILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIG 148
L+L DNMWDDGNSLGPKE+HSYLTRVMYNRRNKF+PLWNSLVLGGVKNGQKYLG V+MIG
Sbjct: 1 LVLNDNMWDDGNSLGPKEVHSYLTRVMYNRRNKFNPLWNSLVLGGVKNGQKYLGTVNMIG 60
Query: 149 VNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAK 208
V+++D+HVATGFGNHLA PILRDEW E+LS+EDGV+LLEKCMRVLLYRDRSAVNKLQIAK
Sbjct: 61 VHYQDNHVATGFGNHLAVPILRDEWKEDLSFEDGVRLLEKCMRVLLYRDRSAVNKLQIAK 120
Query: 209 ITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
IT+ G IS PY+LKTFW F AF+NPTA AEGSW
Sbjct: 121 ITDAGVEISPPYSLKTFWDFGAFKNPTASAEGSW 154
>gi|343172912|gb|AEL99159.1| proteasome subunit beta, partial [Silene latifolia]
Length = 154
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 128/154 (83%), Positives = 143/154 (92%)
Query: 89 LILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIG 148
L+L DNMWDDGNSLGPKE+HSYLTRVMYNRRNKF+PLWNSLVLGGVKNG+KYLG V+MIG
Sbjct: 1 LVLNDNMWDDGNSLGPKEVHSYLTRVMYNRRNKFNPLWNSLVLGGVKNGEKYLGTVNMIG 60
Query: 149 VNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAK 208
V+++D+HVATGFGNHLA PILRDEW E+LS+EDGV+LLEKCMRVLLYRDRSAVNKLQIAK
Sbjct: 61 VHYQDNHVATGFGNHLAVPILRDEWKEDLSFEDGVRLLEKCMRVLLYRDRSAVNKLQIAK 120
Query: 209 ITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
IT+ G IS PY+LKTFW F AF+NPTA AEGSW
Sbjct: 121 ITDAGVEISPPYSLKTFWDFGAFKNPTASAEGSW 154
>gi|307105231|gb|EFN53481.1| hypothetical protein CHLNCDRAFT_25653 [Chlorella variabilis]
Length = 225
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 123/223 (55%), Positives = 170/223 (76%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
+ PYVTGTS++ + YKDG+L+A+D G+YGST RYKS ERI+ + +LGASGE+SDF
Sbjct: 3 CRYPYVTGTSMLGITYKDGVLLASDTLGAYGSTKRYKSFERIRKVNDVCVLGASGELSDF 62
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
Q ++R L+EL D DDG+ L P E+HSYL RV+YNRRNKFDPLWNSLV+GG GQ
Sbjct: 63 QYIMRLLEELSDDDFCMDDGHHLKPAEVHSYLCRVLYNRRNKFDPLWNSLVVGGFYAGQP 122
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
+LG V MIG N+ D H+ATGFGNHLARP++R++ ++S E+ +L+ +C++V YRD++
Sbjct: 123 FLGTVGMIGTNYTDVHLATGFGNHLARPLMREKHRPDMSEEEATELMRECLKVCYYRDKN 182
Query: 200 AVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
++NK Q+AK++ EG TIS+P+AL+T W + F+NP A A G+W
Sbjct: 183 SINKFQMAKVSAEGVTISEPFALETDWKYKLFENPAANAAGAW 225
>gi|321149999|gb|ADW66147.1| proteasome subunit beta type-4 [Solanum nigrum]
Length = 139
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 126/139 (90%), Positives = 134/139 (96%)
Query: 104 PKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNH 163
PKE+H+YLTRVMYNRRNKF+PLWNSLVLGGVKNGQKYLG VSMIGV++ED HVATGFGNH
Sbjct: 1 PKEVHNYLTRVMYNRRNKFNPLWNSLVLGGVKNGQKYLGTVSMIGVHYEDDHVATGFGNH 60
Query: 164 LARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK 223
LARPILRDEWHENLSYE+GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEG TISQPY+LK
Sbjct: 61 LARPILRDEWHENLSYEEGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGVTISQPYSLK 120
Query: 224 TFWGFTAFQNPTAGAEGSW 242
TFW F+AFQNPT GAEGSW
Sbjct: 121 TFWNFSAFQNPTVGAEGSW 139
>gi|384245303|gb|EIE18798.1| 20S proteasome beta subunit, type 4 [Coccomyxa subellipsoidea
C-169]
Length = 289
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 125/242 (51%), Positives = 177/242 (73%)
Query: 1 MESIQAKQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVER 60
M +A +G +DP + T PYVTGTSV+ + Y+DG+L+AAD GSYGST RYKS ER
Sbjct: 48 MVDPKAVAASIGGHDPTKHTTSPYVTGTSVLGVTYRDGVLLAADTLGSYGSTKRYKSFER 107
Query: 61 IKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRN 120
++ + + +++GA GE+SDFQ +L LDEL D DDG L PKE+++YL+RV+YNRR+
Sbjct: 108 LRKVNEQTIIGAGGELSDFQYILTLLDELSNEDFCADDGAKLSPKEIYAYLSRVLYNRRS 167
Query: 121 KFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYE 180
K DPLWNSLV+GG+++G+ +LG ++M+GV++ D H+ATGFG LARP+ R+ ++S E
Sbjct: 168 KMDPLWNSLVVGGLQDGKPFLGTITMLGVHYSDDHIATGFGQMLARPLFRERHRPDMSEE 227
Query: 181 DGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEG 240
+ +LL + +RV YRD+ NK QIAK+T EGT+IS+P+AL+T W + AF NP A A G
Sbjct: 228 EATQLLHEGLRVCYYRDKQTTNKFQIAKVTAEGTSISEPFALETKWDYKAFVNPGALAVG 287
Query: 241 SW 242
+W
Sbjct: 288 TW 289
>gi|255074697|ref|XP_002501023.1| predicted protein [Micromonas sp. RCC299]
gi|226516286|gb|ACO62281.1| predicted protein [Micromonas sp. RCC299]
Length = 280
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 127/238 (53%), Positives = 170/238 (71%), Gaps = 1/238 (0%)
Query: 5 QAKQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPI 64
Q K V P P QRTQ PYVTGT+V+ KYKDG+++A D YGST RYKSVERIK +
Sbjct: 44 QGKPFTVEPG-PHQRTQYPYVTGTTVLGCKYKDGVMIACDTLCCYGSTKRYKSVERIKKV 102
Query: 65 GKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDP 124
+++ +GE+SDF ++ L+EL D DDG+ L P E+HSYL RVMYNRRNKFDP
Sbjct: 103 NSSTIISFTGELSDFHYIVSLLEELDTTDYCEDDGSELAPWEIHSYLCRVMYNRRNKFDP 162
Query: 125 LWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVK 184
LWNSLV+ GVK+G+ +LG V MIG ++EDSH+A GFGNH+ARP+ R++ +++S ED K
Sbjct: 163 LWNSLVVAGVKHGRTFLGTVGMIGQHYEDSHLAAGFGNHMARPLFREKHTDDMSEEDARK 222
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
L+E C+R L RD++ +NK QIAK+T G IS+P+ + WG+ F++PT A G+W
Sbjct: 223 LMEDCLRACLMRDKTMMNKFQIAKVTAGGLEISEPFQVPMNWGYEKFKDPTKHAVGAW 280
>gi|390986535|gb|AFM35787.1| hypothetical protein, partial [Oryza eichingeri]
Length = 162
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 123/162 (75%), Positives = 145/162 (89%), Gaps = 4/162 (2%)
Query: 48 SYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKEL 107
SYGST+RYKSVERIK +GKHSL+GASGE SDFQE+LR LDEL L D+MWDDGNSLGPKE+
Sbjct: 1 SYGSTLRYKSVERIKAVGKHSLIGASGEFSDFQEILRYLDELTLSDHMWDDGNSLGPKEV 60
Query: 108 HSYLTRVMYNRRNKFDPLWNSLVLGGVKNG----QKYLGMVSMIGVNFEDSHVATGFGNH 163
HSYLTRVMYNRRNKFDPLWNSLVLGGVK G +KYLGMV+MIG +FE++H+ATGFGNH
Sbjct: 61 HSYLTRVMYNRRNKFDPLWNSLVLGGVKKGPKGEEKYLGMVNMIGTHFEENHIATGFGNH 120
Query: 164 LARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
+A PILR EW E++++E+ VKL+EKC+ VLLYRDRS++NK Q
Sbjct: 121 MAIPILRAEWREDMTFEEAVKLVEKCLLVLLYRDRSSINKFQ 162
>gi|302854180|ref|XP_002958600.1| hypothetical protein VOLCADRAFT_108195 [Volvox carteri f.
nagariensis]
gi|300256061|gb|EFJ40337.1| hypothetical protein VOLCADRAFT_108195 [Volvox carteri f.
nagariensis]
Length = 284
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 123/229 (53%), Positives = 164/229 (71%), Gaps = 1/229 (0%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
DP Q T+ PYVTGTSV+A+KYKDG+L+ D G+YGST RYK+ +RI + ++ A G
Sbjct: 56 DPRQHTKYPYVTGTSVMAIKYKDGVLVGCDTLGAYGSTKRYKNTQRIYHVNSKCVVAAGG 115
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
EISDFQ + LDEL D DDG L P+E+HSYL RVMYNRRNKFDPLWNSLV+GGV
Sbjct: 116 EISDFQYITNLLDELTTDDYRTDDGIELTPQEVHSYLCRVMYNRRNKFDPLWNSLVVGGV 175
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLL 194
+ G+ +LGM+ MIG ++ DSHV TGF N LARP+ R+ +++S E+ +KL+ +RV
Sbjct: 176 QEGKPFLGMIGMIGTHYTDSHVTTGFANQLARPLFRERQQDDMSEEEALKLMYDALRVCY 235
Query: 195 YRDRSAVNKLQIAKITEE-GTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
YRD+ ++NK QIAK+T++ G +IS+P+AL W + F PT A G+W
Sbjct: 236 YRDKVSINKFQIAKVTKDGGVSISEPFALDMRWDYKLFAQPTKWAVGAW 284
>gi|159474650|ref|XP_001695438.1| 20S proteasome beta subunit, type 4 [Chlamydomonas reinhardtii]
gi|158275921|gb|EDP01696.1| 20S proteasome beta subunit, type 4 [Chlamydomonas reinhardtii]
Length = 285
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/231 (53%), Positives = 163/231 (70%), Gaps = 2/231 (0%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
NDP Q T+ PYVTGTSV+A+KYKDG+L+ D G+YGST RYKS +R+ + ++ A
Sbjct: 55 NDPRQHTKYPYVTGTSVLAVKYKDGVLLGCDTLGAYGSTKRYKSTQRLYRVNDKCVVAAG 114
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
GEISDFQ + LDEL D DDG L P++++SYL RVMYNRRNK DPLWNSLV+GG
Sbjct: 115 GEISDFQHISNLLDELTTDDYRIDDGIQLTPQQVYSYLCRVMYNRRNKMDPLWNSLVVGG 174
Query: 134 VK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRV 192
V+ +G ++LGMV MIG ++ DSHV TGF N LARP+ R+ +++S E+ + LL MRV
Sbjct: 175 VQPDGSQFLGMVGMIGTHYTDSHVTTGFANQLARPLFRERQRDDMSEEEALNLLYDAMRV 234
Query: 193 LLYRDRSAVNKLQIAKITEE-GTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
YRD+ ++NK Q+AK+T G +IS+P+AL W + F NPT A G+W
Sbjct: 235 CYYRDKVSINKFQVAKVTTAGGVSISEPFALDMRWDYKMFSNPTKWAVGAW 285
>gi|145347123|ref|XP_001418027.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578255|gb|ABO96320.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 289
Score = 250 bits (638), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 113/228 (49%), Positives = 156/228 (68%), Gaps = 1/228 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P RTQ PYVTGTS + LKY DG+L+A D YGST RYK+VER+K + + + +GE
Sbjct: 62 PTTRTQTPYVTGTSALGLKYGDGVLLACDTLACYGSTKRYKNVERVKKVNERCAIAFTGE 121
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SDF + L+EL D DDG + +E++ YLTRVMYNRRNKFDPLWNSLV+ G+K
Sbjct: 122 LSDFTYVCNLLEELTTEDFCEDDGMTRDAEEIYQYLTRVMYNRRNKFDPLWNSLVVAGLK 181
Query: 136 -NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLL 194
NG+ +LG V MIG ++ED HV GFGNH+ARPI R+ + +++ E V+++ + +
Sbjct: 182 TNGETFLGTVGMIGTHYEDDHVCAGFGNHIARPIFREFYKADMTEEQAVEVMRSALYACV 241
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
RD+ +NK QI K+T++G TIS+P+A+ T WG+ F NPT +E W
Sbjct: 242 MRDKQMMNKFQICKVTKDGVTISEPFAVPTEWGYEKFYNPTKFSETGW 289
>gi|412989045|emb|CCO15636.1| predicted protein [Bathycoccus prasinos]
Length = 288
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 119/229 (51%), Positives = 163/229 (71%), Gaps = 3/229 (1%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+ RTQ PYVTGTSV+A+KYKDG+LMA D YGST RYKS++R+K +GK++++G +GE+
Sbjct: 60 MTRTQTPYVTGTSVLAVKYKDGVLMACDTLACYGSTKRYKSIQRMKLVGKYTVVGFTGEL 119
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
SDF + LDEL + D DD PKE+++YL RVMYNRRNKFDPLWNSLV+ G
Sbjct: 120 SDFDYISTLLDELEMTDFCQDDECPRTPKEIYNYLVRVMYNRRNKFDPLWNSLVISGWDY 179
Query: 137 GQK--YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLL 194
+K +LG V MIG ++ D HVATGFGNHLARP+ R+ W E ++ ++ KLL+ + +
Sbjct: 180 VEKKPFLGCVGMIGQHYVDDHVATGFGNHLARPLFRESWKEEMTEQEAEKLLKSALLSCV 239
Query: 195 YRDRSAVNKLQIAKITEEGT-TISQPYALKTFWGFTAFQNPTAGAEGSW 242
RD+ +NK Q++KIT +G IS+P+A+ T WG+ + NPT A G+W
Sbjct: 240 MRDKQMMNKFQLSKITADGPGEISEPFAIDTRWGYENYVNPTKYAPGAW 288
>gi|14594935|emb|CAC43328.1| putative beta7 proteasome subunit [Nicotiana tabacum]
Length = 129
Score = 246 bits (628), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 115/129 (89%), Positives = 124/129 (96%)
Query: 46 GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPK 105
GGSYGSTIRYKSVER+K +GKHSLLGASGEISDFQE+ R LDELILYDNMWDDGNSLGPK
Sbjct: 1 GGSYGSTIRYKSVERLKSVGKHSLLGASGEISDFQEISRKLDELILYDNMWDDGNSLGPK 60
Query: 106 ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLA 165
E+H+YLTR+MYNRRNKF+PLWNSLVLGGVKNGQKYLG VSMIGV++ED HVATGFGNHLA
Sbjct: 61 EVHNYLTRMMYNRRNKFNPLWNSLVLGGVKNGQKYLGTVSMIGVHYEDDHVATGFGNHLA 120
Query: 166 RPILRDEWH 174
RPILRDEWH
Sbjct: 121 RPILRDEWH 129
>gi|384489845|gb|EIE81067.1| hypothetical protein RO3G_05772 [Rhizopus delemar RA 99-880]
Length = 265
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 163/217 (75%), Gaps = 3/217 (1%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ RTQ P VTGTSV+A KY+DGI+MAADM GSYGS R++ ++R+ P+G+ +++GASG+
Sbjct: 39 PMTRTQNPLVTGTSVLAFKYRDGIIMAADMLGSYGSLARFRDIKRLYPVGESTIVGASGD 98
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD+Q + LD L++ ++ DDG+ LG ++ YL RVMYNRR+KF+PLWNSLV+GG+
Sbjct: 99 LSDYQYIQHLLDSLMVKEHNADDGHVLGAPHIYEYLWRVMYNRRSKFNPLWNSLVVGGIH 158
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKCMRV 192
G K+LG V + G ++ + +ATGFG HLA+PILR + + L+ E+ V+++ +C+RV
Sbjct: 159 KGDKFLGYVDLRGTTYQSTTIATGFGAHLAQPILRRRVEGREDELTEEEAVEIMNECLRV 218
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
L YRD ++NK QIAKITE GT +S+PY L+T WGF
Sbjct: 219 LFYRDARSMNKYQIAKITENGTHVSEPYQLETEWGFA 255
>gi|353237912|emb|CCA69873.1| probable PRE4-20S proteasome subunit (beta7) [Piriformospora indica
DSM 11827]
Length = 266
Score = 244 bits (623), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 157/218 (72%), Gaps = 4/218 (1%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
D +QRTQ P VTGTSV+ LKY G+++AAD SYGS RYK V+R+ P+G +++GA G
Sbjct: 37 DGVQRTQQPIVTGTSVIGLKYSGGVMLAADNLASYGSLARYKDVQRLHPVGTSTVVGAGG 96
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
++SDFQ L LD L+ + +DDGN LGP E++ YL+RVMY RR+K DPLWN+LV+GGV
Sbjct: 97 DMSDFQHLQHMLDSLVTEEFTYDDGNKLGPTEIYEYLSRVMYGRRSKMDPLWNALVVGGV 156
Query: 135 K-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKCM 190
K NG+ +LG V ++G ++ +ATGFG ++A+P+LR DE + LS E+ VK++++CM
Sbjct: 157 KPNGESFLGYVDLLGTTYQSPTIATGFGAYIAQPLLRNAVDERPDPLSEEEAVKVIQQCM 216
Query: 191 RVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
+ L YRD ++NK QIAK+T EG TIS P T WGF
Sbjct: 217 KALFYRDARSLNKYQIAKVTSEGVTISDPLEAPTVWGF 254
>gi|299117057|emb|CBN73828.1| 20S proteasome beta subunit [Ectocarpus siliculosus]
Length = 252
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 118/228 (51%), Positives = 155/228 (67%), Gaps = 3/228 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
Q T P VTGTSV+ +KYKDG+++AAD SYGS RYK+VER+KP+G+ +L+GASGE S
Sbjct: 25 QHTSQPIVTGTSVLGIKYKDGVMLAADTLASYGSLARYKNVERLKPVGECTLIGASGEYS 84
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KN 136
DFQ ++ L++ YD DDG P E+++ L +MYNRRNKF+PLWN L++ G K+
Sbjct: 85 DFQHIMETLEDYHQYDVNMDDGFERSPAEIYNLLRTIMYNRRNKFNPLWNYLLIAGCKKD 144
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
G +LG V IG +ED+ +ATGFG HLA PILR +W +L + LLE CMRVL YR
Sbjct: 145 GTAFLGSVDHIGTCYEDNILATGFGGHLALPILRKKWRPDLEEGEARALLEDCMRVLFYR 204
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAG--AEGSW 242
D A+N++QIAK T EGT +S Y + T W +F P AG +GSW
Sbjct: 205 DCRALNRIQIAKATAEGTVVSDAYKVDTEWSLASFSQPKAGQDTDGSW 252
>gi|440801110|gb|ELR22135.1| proteasome subunit beta type4, putative [Acanthamoeba castellanii
str. Neff]
Length = 266
Score = 243 bits (620), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 110/213 (51%), Positives = 152/213 (71%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P RT P TGTSV+A++YKDG+++ AD SYGS R++S RIK +G++++LGASGE
Sbjct: 43 PSTRTLDPITTGTSVLAIQYKDGVMLTADTLVSYGSLARFRSCSRIKKVGEYTILGASGE 102
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
SDFQ LDELI D+ ++DG L P E+ SYL RVMY RRNKFDPLWN +L G +
Sbjct: 103 YSDFQSTSVMLDELIDRDHAYEDGAKLHPHEIFSYLGRVMYGRRNKFDPLWNQYILAGFR 162
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLY 195
+G+ +LG V + G F+DS +ATG+G H+ARP++R + +LS E+ K+LE CMRV+ Y
Sbjct: 163 DGKSFLGQVDLYGTAFQDSTLATGYGAHIARPLMRKAYRPDLSEEEARKVLEDCMRVMFY 222
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
RD +NK+Q+AK+T EG +S+PY+L T W +
Sbjct: 223 RDARTINKIQLAKVTAEGVVVSEPYSLATEWTY 255
>gi|384501730|gb|EIE92221.1| hypothetical protein RO3G_17028 [Rhizopus delemar RA 99-880]
Length = 265
Score = 243 bits (619), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 113/217 (52%), Positives = 162/217 (74%), Gaps = 3/217 (1%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ RTQ P VTGTSV+A KY+DGI+MAADM GSYGS R++ ++R+ P+G+ +++GASG+
Sbjct: 39 PMTRTQNPLVTGTSVLAFKYRDGIIMAADMLGSYGSLARFRDIKRLYPVGESTIVGASGD 98
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD+Q + LD L++ ++ DDG+ LG ++ YL RVMYNRR+KF+PLWNSLV+GG+
Sbjct: 99 LSDYQYIQHLLDSLMVKEHNADDGHVLGAPHIYEYLWRVMYNRRSKFNPLWNSLVVGGIH 158
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKCMRV 192
G+K+LG V + G ++ + +ATGFG HLA+PILR + + L+ E+ V ++ +C+RV
Sbjct: 159 KGEKFLGYVDLRGTTYQSTTIATGFGAHLAQPILRRRVEGREDELTEEEAVDIMNECLRV 218
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
L YRD ++NK QIAKITE G IS+PY L+T WGF
Sbjct: 219 LFYRDARSMNKYQIAKITENGLHISEPYQLETEWGFA 255
>gi|325183713|emb|CCA18172.1| proteasome subunit beta putative [Albugo laibachii Nc14]
Length = 261
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/230 (50%), Positives = 156/230 (67%), Gaps = 2/230 (0%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
+ IQRTQ P V GTSV+A+KYKDG+LMAAD GSYGS R+ R+ + +L+GASG
Sbjct: 32 ESIQRTQSPIVVGTSVIAIKYKDGVLMAADTLGSYGSLARFTDQRRMMSVHNATLIGASG 91
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+ SD+Q LDEL ++D DDG L EL+ YL R+MY RRNKFDPLWN+L++ GV
Sbjct: 92 DFSDYQFFKDKLDELEVFDYNQDDGCDLTAPELYHYLQRLMYQRRNKFDPLWNTLLIAGV 151
Query: 135 K-NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRV 192
N QK +LG +MIG+ FE ++ATGFG+H A PILR W E+LS ++ KLL +CMR+
Sbjct: 152 DPNTQKPFLGQSTMIGLAFEGDYLATGFGHHFAMPILRKSWREDLSLDEAKKLLLECMRI 211
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
LYRD +N++QIAK+ + G IS+P + T W + F +P + GSW
Sbjct: 212 CLYRDCRTINRIQIAKVDKTGVDISEPIQMDTKWDYKLFVDPKSQFGGSW 261
>gi|308804185|ref|XP_003079405.1| beta 7 subunit of 20S proteasome (ISS) [Ostreococcus tauri]
gi|116057860|emb|CAL54063.1| beta 7 subunit of 20S proteasome (ISS) [Ostreococcus tauri]
Length = 289
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/228 (47%), Positives = 151/228 (66%), Gaps = 1/228 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P RTQ PYVTGTS + LKY G+L+A D YGST RYKSVER+K + + +GE
Sbjct: 62 PATRTQTPYVTGTSALGLKYAGGVLLATDTLACYGSTKRYKSVERVKRVNDKCAIAFTGE 121
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV- 134
+SDF + L+EL D DDG + +E++ YLTRVMYNRR+KFDPLWNS V+ G
Sbjct: 122 LSDFAYVCDLLEELTTEDFCEDDGTTRDAEEIYQYLTRVMYNRRSKFDPLWNSFVVAGYD 181
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLL 194
G+ + G V MIG ++ D HVA GFGNH+ARPI R+ + +L+ E+ V++++ + +
Sbjct: 182 AKGEAFCGTVGMIGTHYADDHVAAGFGNHIARPIFREFYKPDLTEEEAVEIMKSALYACV 241
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
RD+ +NK QIAK+T+EG +I +P+A+ T WG+ F NPT + G W
Sbjct: 242 MRDKQMMNKFQIAKVTKEGVSIGEPFAVPTEWGYEKFYNPTKFSPGGW 289
>gi|449544866|gb|EMD35838.1| hypothetical protein CERSUDRAFT_115768 [Ceriporiopsis subvermispora
B]
Length = 267
Score = 237 bits (604), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 111/217 (51%), Positives = 156/217 (71%), Gaps = 3/217 (1%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
D +QRTQ P VTGTSV+A++YKDGI+MAAD SYGS R+KS++R+ +G +++LGASG
Sbjct: 39 DAVQRTQQPIVTGTSVLAIQYKDGIMMAADNLASYGSLARFKSIQRLHAVGTNTVLGASG 98
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
++SDFQ + LDEL+ + D +SLGP E+H YL RVMY+RR+KFDPLWN+L++GG
Sbjct: 99 DMSDFQYIQTLLDELVTDEFTHQDAHSLGPAEVHEYLARVMYSRRSKFDPLWNALLVGGF 158
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKCMR 191
K+G+++L V ++GV + +ATG+G H+A P+LR D + L+ ED KLL CMR
Sbjct: 159 KDGKRFLAYVDLLGVTYSAPSLATGYGAHIAIPLLREVVDGRQDTLTEEDARKLLHDCMR 218
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
VL YRD +++K Q+AK+TE G IS ++T W F
Sbjct: 219 VLFYRDARSLDKYQLAKVTESGVEISDSIKIETAWNF 255
>gi|409041767|gb|EKM51252.1| hypothetical protein PHACADRAFT_263295 [Phanerochaete carnosa
HHB-10118-sp]
Length = 265
Score = 236 bits (601), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 110/215 (51%), Positives = 155/215 (72%), Gaps = 3/215 (1%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+QRTQ P VTGTSV+A+KYKDGI+MAAD SYGS R+KSV+R+ +G+ ++LGASG++
Sbjct: 39 VQRTQQPIVTGTSVLAIKYKDGIMMAADTLASYGSLARFKSVQRLHAVGRTTVLGASGDM 98
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
SDFQ L LDEL+ + DGN P+E+H YL RVMY RR+K +PLWN+L++GGV++
Sbjct: 99 SDFQYLQGMLDELVTDEFTAGDGNEFAPQEVHEYLARVMYARRSKMNPLWNALLVGGVRD 158
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKCMRVL 193
G+ +LG V ++G ++ S +ATG+G H+A P+LR + + L+ E+ ++L + MRVL
Sbjct: 159 GKSFLGYVDLLGTTYQASTLATGYGAHIALPLLRQAVETREDTLAEEEAKRVLTESMRVL 218
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
YRD ++NK QIAK+TE G IS+P L T W F
Sbjct: 219 FYRDARSLNKFQIAKVTETGVDISEPIVLDTHWSF 253
>gi|428179890|gb|EKX48759.1| 20S proteasome subunit beta type 4 [Guillardia theta CCMP2712]
Length = 233
Score = 231 bits (590), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 158/219 (72%), Gaps = 1/219 (0%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
+P RTQ P VTGT V+ +KY G+++A D GSYGS R+++V+R++ +G +++GASG
Sbjct: 8 EPSTRTQQPIVTGTGVLGIKYNGGVMLACDTLGSYGSLARFRTVKRLEKVGDFTVVGASG 67
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
++SDFQ++ L E+ D+ +DDG ++ P+++H YL RVMYNRRNKFDPLWN LV+ G
Sbjct: 68 DLSDFQKISSMLREMSTSDSAYDDGCNMTPRDIHQYLGRVMYNRRNKFDPLWNELVVAGF 127
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLL 194
++G+ +LG V +IG +ED +AT FGN++ P++R + NLS E+ +++E C+RVL
Sbjct: 128 RDGKPFLGAVDLIGTMYEDDIIATSFGNYVCLPLMR-KAGTNLSKEEAKQVMENCLRVLY 186
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQN 233
YR+ + K+QIA ++ EG I +P+ + T+WG++AFQ+
Sbjct: 187 YRNTKSSTKIQIATVSAEGVEIGEPFEISTYWGYSAFQH 225
>gi|348689699|gb|EGZ29513.1| hypothetical protein PHYSODRAFT_294642 [Phytophthora sojae]
Length = 231
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 108/230 (46%), Positives = 151/230 (65%), Gaps = 2/230 (0%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
D QRTQ P VTG+SV+ALKYK G+LMAAD GSYGS R+ R+ + +LLGA G
Sbjct: 2 DSRQRTQSPIVTGSSVIALKYKGGVLMAADTLGSYGSLARFTDQRRLTAVHNTTLLGAGG 61
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+ SDFQ + +DEL +YD DDG + E++ YL R++Y+RRNKFDPLWN++V+GG+
Sbjct: 62 DFSDFQFIKDKMDELEVYDFNQDDGCDMTAPEIYHYLQRLLYHRRNKFDPLWNTVVVGGL 121
Query: 135 --KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRV 192
+ G+ +LG V+MIG+ FE +ATGFG+HL P+LR W ++ + KLLE CMRV
Sbjct: 122 NPETGKPFLGQVTMIGLAFEGDFIATGFGHHLGMPLLRKHWRPDMEEAEARKLLEDCMRV 181
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
YRD +N++Q AK+ +G +I +P + T W ++ F P + SW
Sbjct: 182 CFYRDCRTINRVQFAKVAADGVSIPEPVKMDTKWDYSMFVKPKSDFGASW 231
>gi|301092289|ref|XP_002997003.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
gi|262112192|gb|EEY70244.1| proteasome subunit beta, putative [Phytophthora infestans T30-4]
Length = 231
Score = 229 bits (583), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 108/227 (47%), Positives = 148/227 (65%), Gaps = 2/227 (0%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRTQ P VTGTSV+ALKYK G++MAAD GSYGS R+ R+ + +LLGA G+ S
Sbjct: 5 QRTQSPIVTGTSVIALKYKSGVMMAADTLGSYGSLARFTDQRRLTAVHNTTLLGAGGDFS 64
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV--K 135
DFQ + +DEL +YD DDG E++ YL R++Y+RRNKFDPLWN++V+GG+ +
Sbjct: 65 DFQFIKDKMDELEVYDFNEDDGCDTTAPEIYHYLQRLLYHRRNKFDPLWNTVVVGGLNPE 124
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLY 195
G+ +LG ++MIG+ FE +VATGFG+HL P+LR W N+ D LLE CMRV Y
Sbjct: 125 TGKPFLGQITMIGLAFEGDYVATGFGHHLGMPLLRKHWRPNMEEADARNLLEDCMRVCFY 184
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGSW 242
RD +N++Q AK+ +G TI +P + T W ++ F + SW
Sbjct: 185 RDCRTINRVQFAKVEADGITIPEPIKMDTKWDYSQFVKTKSEVGSSW 231
>gi|2511598|emb|CAA74030.1| multicatalytic endopeptidase complex, proteasome component, beta
subunit [Arabidopsis thaliana]
Length = 121
Score = 227 bits (578), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 102/121 (84%), Positives = 114/121 (94%)
Query: 122 FDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYED 181
F+PLWN+LVLGGVKNG+ YLGMVSMIGV+FED HVATGFGNHLARPILRDEWH +LS+ED
Sbjct: 1 FNPLWNTLVLGGVKNGKSYLGMVSMIGVSFEDDHVATGFGNHLARPILRDEWHADLSFED 60
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEGS 241
GVKLLEKCMRVLLYRDRSA+NKLQIAKITEEG T+SQPY+LKT+W F++F NPTAGA GS
Sbjct: 61 GVKLLEKCMRVLLYRDRSAINKLQIAKITEEGVTVSQPYSLKTYWEFSSFHNPTAGAAGS 120
Query: 242 W 242
W
Sbjct: 121 W 121
>gi|426192327|gb|EKV42264.1| hypothetical protein AGABI2DRAFT_195981 [Agaricus bisporus var.
bisporus H97]
Length = 266
Score = 226 bits (575), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 158/215 (73%), Gaps = 3/215 (1%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+Q TQ P VTGTSV+ALKYKDG++MAAD SYGS R+K ++R+ P+GK++++GA G++
Sbjct: 40 VQHTQQPIVTGTSVLALKYKDGVMMAADNLASYGSLARFKDIQRLHPVGKYTVIGAGGDM 99
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
SDFQ + + L++LI+ + DG+ LGP ++H YL++VMY+RR+K +PLWNSL++GG K+
Sbjct: 100 SDFQYIQKFLEQLIIEEFTSQDGHDLGPAQIHEYLSQVMYSRRSKINPLWNSLLVGGFKD 159
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH--EN-LSYEDGVKLLEKCMRVL 193
G+ +L V ++G + + +ATGFG +LA+PILR E EN L+ E+ ++++E CM+VL
Sbjct: 160 GKSFLSYVDLLGTTYSATTLATGFGAYLAQPILRKEVEGRENELTEEEAIRVMESCMKVL 219
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
YRD +++K Q+A IT +G IS+ L T W F
Sbjct: 220 YYRDARSLDKYQLAVITADGVKISESRHLSTTWSF 254
>gi|323452263|gb|EGB08137.1| hypothetical protein AURANDRAFT_69799 [Aureococcus anophagefferens]
Length = 251
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 151/225 (67%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P Q T P VTGTSV+ +KYKDG+++AAD SYGS +K V+RI G ++L+GASGE
Sbjct: 23 PRQHTSRPIVTGTSVLGIKYKDGVMLAADTLASYGSLAMFKDVQRISKTGSYTLVGASGE 82
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD+ +LR L+ L + +DG P E++SYL VMY RNKF+PLWNSLV+GG K
Sbjct: 83 MSDYHAILRKLEGLERDNLNANDGFEHSPVEIYSYLRAVMYQARNKFNPLWNSLVVGGYK 142
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLY 195
+G+ +LG V + G +ED +ATGFG HLA PI+R +WH ++ + LLE C+RVL Y
Sbjct: 143 DGKAFLGSVDLRGTAYEDDVIATGFGAHLALPIMRAKWHADIDEGEARALLEDCLRVLFY 202
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAGAEG 240
RD A++ + ++K T +GT +S PY ++T W +F P AG +G
Sbjct: 203 RDCRALDMVVLSKATADGTLVSDPYKIETDWSSASFVVPKAGEDG 247
>gi|390595066|gb|EIN04473.1| proteasome endopeptidase complex beta subunit [Punctularia
strigosozonata HHB-11173 SS5]
Length = 266
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 158/218 (72%), Gaps = 3/218 (1%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
D +QRTQ P VTGTSV+A+KYKDGI+MAAD SYGS R+K V+R+ IG +++LGA G
Sbjct: 38 DGVQRTQQPIVTGTSVLAIKYKDGIMMAADNLASYGSLARFKDVQRLHSIGNYTVLGAGG 97
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
++SDFQ + LD+L++ + DG+ LGP E+H YL +VMY RR+K +PLWNSL++GG
Sbjct: 98 DMSDFQYIQSILDDLVIEEFTAGDGHDLGPAEIHEYLAQVMYARRSKINPLWNSLLVGGF 157
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKCMR 191
K+G+++L V ++G + S +ATG+G+++A+P+LR + ++L+ E+ +K++E MR
Sbjct: 158 KDGKRFLAYVDLLGTTYSASTLATGYGSYIAQPLLRKAVEGKEDDLTEEEALKIIEDSMR 217
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
VL YRD ++NK Q+A IT +G +IS+ +L T W F
Sbjct: 218 VLFYRDARSLNKYQVATITAKGVSISESRSLDTQWSFA 255
>gi|299748959|ref|XP_001840270.2| proteasome beta 4 subunit [Coprinopsis cinerea okayama7#130]
gi|298408215|gb|EAU81717.2| proteasome beta 4 subunit [Coprinopsis cinerea okayama7#130]
Length = 252
Score = 223 bits (569), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 153/212 (72%), Gaps = 3/212 (1%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
++ P VTGTSV+A+KYKDGI+MAAD SYGS R+K V R++ +G H+++GASG++SDF
Sbjct: 29 SEQPIVTGTSVLAIKYKDGIMMAADNLASYGSLARFKDVPRLQAVGTHTVVGASGDMSDF 88
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
Q L + LDELI+ + DG+SLG KE+H YL++VMY RR+K DPLWNSL++GGV G++
Sbjct: 89 QYLQKVLDELIVEEFTNADGHSLGAKEIHEYLSQVMYARRSKMDPLWNSLLVGGVDKGER 148
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEW---HENLSYEDGVKLLEKCMRVLLYR 196
+L V ++G + S +ATG+G +LA+P+LR E + L+ ++ K+LEK M+VL YR
Sbjct: 149 FLAYVDLLGTTYSASTLATGYGAYLAQPLLRKEVEGREDTLTEDEARKILEKSMKVLFYR 208
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
D +++K QIA IT +G I+ L T+W F
Sbjct: 209 DARSLDKYQIATITADGVKITDSQRLDTYWAF 240
>gi|414589966|tpg|DAA40537.1| TPA: hypothetical protein ZEAMMB73_614359 [Zea mays]
Length = 170
Score = 223 bits (567), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 106/131 (80%), Positives = 117/131 (89%), Gaps = 4/131 (3%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRTQ PYVTGTSV+ALKYKDG++MA D G SYGST+RYKSVERIK +GKHS++GASGE S
Sbjct: 35 QRTQYPYVTGTSVIALKYKDGVIMACDTGASYGSTLRYKSVERIKAVGKHSIIGASGEFS 94
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQE+LR LDEL L D+MWDDGNSLGPKE+HSYLTRVMYNRRNKFDPLWNSLVLGGVK G
Sbjct: 95 DFQEILRYLDELTLSDHMWDDGNSLGPKEIHSYLTRVMYNRRNKFDPLWNSLVLGGVKKG 154
Query: 138 ----QKYLGMV 144
+KYLGMV
Sbjct: 155 PKGDEKYLGMV 165
>gi|336363264|gb|EGN91672.1| hypothetical protein SERLA73DRAFT_100252 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381921|gb|EGO23072.1| hypothetical protein SERLADRAFT_471757 [Serpula lacrymans var.
lacrymans S7.9]
Length = 266
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 155/218 (71%), Gaps = 3/218 (1%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
D +QRTQ P VTGTSV+A+KYKDGI+MAAD SYGS R+K V+R+ P+G++++LGA G
Sbjct: 38 DAVQRTQQPIVTGTSVLAIKYKDGIMMAADNLASYGSLARFKDVQRLHPVGQYTVLGAGG 97
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
++SDFQ + L++L + + DG++LGP E+H Y++ VMY RR+K +PLWNSL++GG
Sbjct: 98 DMSDFQYIQHMLEQLSIDEFTCQDGHNLGPAEIHEYMSHVMYARRSKMNPLWNSLIVGGY 157
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHEN-LSYEDGVKLLEKCMR 191
K+G+++L V ++G + S +ATG+G ++A+P+LR E E+ L+ E+ K++E MR
Sbjct: 158 KDGKRFLSYVDLLGTTYSASTLATGYGAYIAQPLLRKAVEGREDVLTEEEARKIIEDSMR 217
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
VL YRD ++NK QIA +T G IS+ L T W F
Sbjct: 218 VLFYRDARSLNKFQIATVTSVGVNISESIQLDTSWSFA 255
>gi|409076878|gb|EKM77247.1| hypothetical protein AGABI1DRAFT_43707 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 234
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 154/209 (73%), Gaps = 3/209 (1%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P VTGTSV+ALKYKDG++MAAD SYGS R+K ++R+ P+GK++++GA G++SDFQ +
Sbjct: 14 PIVTGTSVLALKYKDGVMMAADNLASYGSLARFKDIQRLHPVGKYTVIGAGGDMSDFQYI 73
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
+ L++LI+ + DG+ LGP ++H YL++VMY+RR+K +PLWNSL++GG K+G+ +L
Sbjct: 74 QKFLEQLIIEEFTSQDGHDLGPAQIHEYLSQVMYSRRSKINPLWNSLLVGGFKDGKSFLS 133
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWH--EN-LSYEDGVKLLEKCMRVLLYRDRS 199
V ++G + + +ATGFG +LA+PILR E EN L+ E+ ++++E CM+VL YRD
Sbjct: 134 YVDLLGTTYSATTLATGFGAYLAQPILRKEVEGRENELTEEEAIRIMESCMKVLYYRDAR 193
Query: 200 AVNKLQIAKITEEGTTISQPYALKTFWGF 228
+++K Q+A IT +G IS+ L T W F
Sbjct: 194 SLDKYQLAVITADGVKISESRHLSTTWSF 222
>gi|302687062|ref|XP_003033211.1| hypothetical protein SCHCODRAFT_53922 [Schizophyllum commune H4-8]
gi|300106905|gb|EFI98308.1| hypothetical protein SCHCODRAFT_53922 [Schizophyllum commune H4-8]
Length = 229
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 153/217 (70%), Gaps = 3/217 (1%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P + P VTGTSV+ALKYKDGI++AAD SYGS R+K V+R+ +G ++ +GASG+
Sbjct: 2 PHHLRRQPIVTGTSVLALKYKDGIMLAADNLASYGSLARFKDVQRLHAVGDYTCIGASGD 61
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + LD +++ + DG++LGPKE+H YL++VMY RR+K +PLWNSL++GG K
Sbjct: 62 MSDLQYIQGLLDSVMIDEFTAADGHTLGPKEVHEYLSQVMYARRSKMNPLWNSLLVGGYK 121
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN---LSYEDGVKLLEKCMRV 192
+G+++L V ++GV + S +ATGFG +LA+P+LR N L+ +D K++E CM+V
Sbjct: 122 DGERFLAYVDLLGVTYSSSTLATGFGAYLAQPLLRKAVEGNEDTLTEQDAEKIIEDCMKV 181
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
L YRD ++NK QIAKI G TIS+ +L+T W F
Sbjct: 182 LFYRDARSLNKFQIAKIDAMGVTISESRSLETHWSFA 218
>gi|443894949|dbj|GAC72295.1| 20S proteasome, regulatory subunit beta type PSMB4/PRE4 [Pseudozyma
antarctica T-34]
Length = 266
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/219 (47%), Positives = 151/219 (68%), Gaps = 5/219 (2%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
DP T P VTGTSV+ LKYKDGI++A D SYGS R+ + RI G+++L+GASG
Sbjct: 36 DPTSHTSQPIVTGTSVLGLKYKDGIMLATDTLASYGSLARFMDITRISQFGQNTLIGASG 95
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
++SD+Q + L +LI + + DG++L P ++++YL RVMY RR+ +PLWNS VLGGV
Sbjct: 96 DMSDWQYVQHMLGKLITSEEVTADGHTLTPAQIYAYLARVMYKRRSDINPLWNSFVLGGV 155
Query: 135 --KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKC 189
K+G +LG V ++G F S +ATGFG HLA+P+LR + + L+ E+ +LE C
Sbjct: 156 DPKDGTPFLGYVDLLGTTFTSSTIATGFGLHLAQPLLRKMVEGREDTLTEEEAKDILENC 215
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
M+VL YRD ++N+ ++AK+T+EG IS+PY++ T WGF
Sbjct: 216 MKVLFYRDARSLNRFRVAKVTKEGCHISEPYSVPTSWGF 254
>gi|270056441|gb|ACZ59446.1| hypothetical protein [Pleurotus ostreatus]
Length = 250
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 150/212 (70%), Gaps = 3/212 (1%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
D +QRTQ P VTGTSV+A+KYKDGI+MAAD SYGS R K V+ + PIG +++ A G
Sbjct: 37 DGVQRTQQPIVTGTSVLAIKYKDGIMMAADNLASYGSLARVKDVQSLHPIGDCTVIRAGG 96
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
++S+FQ + + LDEL+ + DG++LGP E+H Y++ VMY RR+K +PLWNSLV+GG
Sbjct: 97 DMSNFQYIQQMLDELVTEEFATQDGHTLGPVEIHEYMSHVMYARRSKINPLWNSLVIGGF 156
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN---LSYEDGVKLLEKCMR 191
KNG+ +L V ++G + S +ATG+G+ +A+P+LR N L+ E+ +K++E MR
Sbjct: 157 KNGKSFLSYVDLLGTTYTASTIATGYGSMIAQPLLRKAVEGNETTLTEEEALKIIESSMR 216
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALK 223
VL YRD ++NK Q+A ITE+G TIS+ L+
Sbjct: 217 VLFYRDARSINKFQVATITEKGATISESRHLE 248
>gi|392588509|gb|EIW77841.1| proteasome endopeptidase complex beta subunit [Coniophora puteana
RWD-64-598 SS2]
Length = 266
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/224 (46%), Positives = 154/224 (68%), Gaps = 7/224 (3%)
Query: 12 GPNDP----IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKH 67
GP D +QRTQ P VTGTSV+A+KYKDGI+MAAD SYGS R+K V+R+ +G +
Sbjct: 31 GPKDAFAAGVQRTQQPIVTGTSVLAIKYKDGIMMAADNLASYGSLARFKDVQRLHSVGSY 90
Query: 68 SLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
+++GA G++SDFQ + + LD+LI + DG+ LGP E+H Y+++VMY RR+K +PLWN
Sbjct: 91 TVIGAGGDMSDFQYIQKLLDDLITDEFTAQDGHELGPVEIHEYMSQVMYARRSKMNPLWN 150
Query: 128 SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVK 184
SL++GG K+G+++L V ++G + S +ATG+G ++A+P+LR + + L+ E+ K
Sbjct: 151 SLLIGGFKDGKRFLSYVDLLGTTYTASTLATGYGAYIAQPLLRKAVEGKEDTLTEEEARK 210
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
+LE MRVL YRD ++NK QI+ +T G IS L T W F
Sbjct: 211 ILEDSMRVLFYRDARSINKFQISTVTSNGVWISDSIHLDTAWSF 254
>gi|388854733|emb|CCF51626.1| probable PRE4-20S proteasome subunit (beta7) [Ustilago hordei]
Length = 266
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 100/220 (45%), Positives = 154/220 (70%), Gaps = 5/220 (2%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
+DP T P VTGTSV+ LKY+DGI++A D SYGS R+ + RI G+++L+GAS
Sbjct: 35 SDPTSHTSQPIVTGTSVLGLKYRDGIMLATDTLASYGSLARFMDITRISQFGQNTLIGAS 94
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
G++SD+Q + L++L+ +++ DG+ L P ++++YL RVMYNRR+ +PLWNS VLGG
Sbjct: 95 GDMSDWQYVQHMLNKLVTSEDVAADGHHLTPTQIYAYLARVMYNRRSNVNPLWNSFVLGG 154
Query: 134 V--KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEK 188
V K+G +LG V ++G F S +ATGFG HLA+P+LR + ++L+ + ++E
Sbjct: 155 VDPKDGTPFLGYVDLLGTTFTSSTIATGFGMHLAQPLLRKMVEGREDSLTEAEAKDIMEN 214
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
CM+VL YRD ++N+ ++AK+T++G IS+PY++ T WGF
Sbjct: 215 CMKVLFYRDARSLNRFRVAKVTKDGCEISEPYSVPTSWGF 254
>gi|403413332|emb|CCM00032.1| predicted protein [Fibroporia radiculosa]
Length = 279
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/229 (45%), Positives = 155/229 (67%), Gaps = 17/229 (7%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+QRTQ P VTGTSV+A++YKDGI+MAAD SYGS R+K ++R+ P+G +++GASG++
Sbjct: 39 VQRTQQPIVTGTSVLAIQYKDGIMMAADNLASYGSLARFKDIQRLHPVGPSTVIGASGDM 98
Query: 77 SDFQELLRNLDELILYDNMWDDG--NSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
SDFQ L LD LI + DG N+LGP E+H YL+RV+Y+RR+K DP+WN+L++GG+
Sbjct: 99 SDFQHLQHTLDALITDEFTQSDGEANALGPAEVHEYLSRVLYSRRSKMDPIWNALLVGGL 158
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHEN-LSYEDGVKLLEKCMR 191
++G+++L V ++G + +ATG+G H+A P+LRD + H++ L+ ED +LL CMR
Sbjct: 159 QDGKRFLAYVDLLGTTYSAPSIATGYGAHIAIPLLRDVVDGHQDTLTEEDARQLLHDCMR 218
Query: 192 VLLYRDRSAVNK------------LQIAKITEEGTTISQPYALKTFWGF 228
VL YRD +++K Q+A +T G +IS L T W F
Sbjct: 219 VLYYRDARSLDKSNSFTASYSISLYQLATVTATGVSISDQIKLDTTWAF 267
>gi|389739471|gb|EIM80664.1| proteasome endopeptidase complex beta subunit [Stereum hirsutum
FP-91666 SS1]
Length = 267
Score = 217 bits (553), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 153/216 (70%), Gaps = 4/216 (1%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+QRTQ P VTGTSV+AL YKDGI+MA D SYGS R+K ++R+ P+G+++++GA G++
Sbjct: 40 VQRTQQPIVTGTSVLALTYKDGIMMATDNLASYGSLARFKDIQRLHPVGEYTVVGAGGDM 99
Query: 77 SDFQELLRNLDELILYDNM-WDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
SDFQ L LD+LI+ + D + LGP E+H YL+ VMY RR+K +PLWNSL++GG K
Sbjct: 100 SDFQYLQHILDDLIIEQEVNTQDNHKLGPAEVHEYLSNVMYARRSKINPLWNSLLVGGFK 159
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHEN-LSYEDGVKLLEKCMRV 192
+G+K+L V ++G + S +ATG+G ++A P+LR E EN L+ E+ ++E+ +RV
Sbjct: 160 DGKKFLAYVDLLGTTYSASTIATGYGAYIALPLLRKAVEGRENTLTEEEARAIMEESLRV 219
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
L YRD ++NK QIA +T GT+IS L+T WGF
Sbjct: 220 LFYRDARSLNKYQIATVTASGTSISDSIKLETSWGF 255
>gi|358058902|dbj|GAA95300.1| hypothetical protein E5Q_01957 [Mixia osmundae IAM 14324]
Length = 255
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 99/221 (44%), Positives = 149/221 (67%), Gaps = 6/221 (2%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
D IQRTQ P VTGTSV+ +K+ G+++AAD SYGS R+ V+R+ P+G H+ + A
Sbjct: 23 TDAIQRTQQPIVTGTSVLGVKFDGGVILAADTLASYGSLARFDDVQRLHPVGPHTCIAAG 82
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
G++SDFQ+L LD L+ + + DDG++L +++ +L+RVMY RR+KFDPLWNSL++ G
Sbjct: 83 GDMSDFQQLQHMLDGLMREERLQDDGSTLTTAQIYEWLSRVMYGRRSKFDPLWNSLLVAG 142
Query: 134 VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH------ENLSYEDGVKLLE 187
++N Q +LG V ++G + +ATG+G ++A+P+LR + + L+ +D LL
Sbjct: 143 IENDQPFLGYVDLLGTTYSSPTLATGYGAYIAQPLLRKAYEDKHAAGQKLTKDDAEALLR 202
Query: 188 KCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
KCM+VL YRD ++NK Q A IT+EG IS+P + T W F
Sbjct: 203 KCMKVLFYRDARSLNKYQFAVITKEGVEISKPMSSDTEWAF 243
>gi|328769583|gb|EGF79626.1| hypothetical protein BATDEDRAFT_16747 [Batrachochytrium
dendrobatidis JAM81]
Length = 271
Score = 216 bits (550), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 152/216 (70%), Gaps = 3/216 (1%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI TQ P VTGTSV+ +KYKDGI+M AD SYGS + + ++R+ G+ +++GASG+
Sbjct: 44 PITHTQQPIVTGTSVIGIKYKDGIMMTADTLASYGSLAQIRDMKRMTSFGESTVIGASGD 103
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD+Q + + + ++ ++ DDG+ L P+ + YLTRVMY RR+ +PLWNSLV+GG +
Sbjct: 104 MSDWQLIQHMVQDRVIAESAHDDGHQLHPEHIFEYLTRVMYGRRSNTNPLWNSLVIGGFR 163
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHEN-LSYEDGVKLLEKCMRV 192
+G+++LG V M+G + S +ATG+G ++A+P+LR E HE+ L+ D +K+L+ CMRV
Sbjct: 164 DGKRFLGYVDMLGTTYHSSTIATGYGAYIAQPLLRKAVEGHEDELTEADAIKILDDCMRV 223
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
L YRD ++NK+Q A I G TI++PY+L T W F
Sbjct: 224 LFYRDARSINKIQRATINATGITITEPYSLTTEWNF 259
>gi|348586605|ref|XP_003479059.1| PREDICTED: proteasome subunit beta type-4-like [Cavia porcellus]
Length = 263
Score = 216 bits (549), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 154/216 (71%), Gaps = 2/216 (0%)
Query: 13 PNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGA 72
P DPI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGA
Sbjct: 39 PGDPITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNDSTILGA 98
Query: 73 SGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
SG+ +DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+G
Sbjct: 99 SGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIG 158
Query: 133 GVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCM 190
G +G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CM
Sbjct: 159 GYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCM 218
Query: 191 RVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
RVL YRD + N+ +IA +TE+G I P + +T W
Sbjct: 219 RVLYYRDARSYNRFEIATVTEKGVEIEGPLSAETNW 254
>gi|343427375|emb|CBQ70902.1| probable PRE4-20S proteasome subunit (beta7) [Sporisorium reilianum
SRZ2]
Length = 266
Score = 216 bits (549), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 102/219 (46%), Positives = 151/219 (68%), Gaps = 5/219 (2%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
DP T P VTGTSV+ LKYKDGI++A D SYGS R+ + RI G+++L+GASG
Sbjct: 36 DPTSHTSQPIVTGTSVLGLKYKDGIMLATDTLASYGSLARFMDITRISQFGQNTLIGASG 95
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
++SD+Q + L++LI +++ DG+ L P ++++YL RVMY RR+ +PLWNS VL GV
Sbjct: 96 DMSDWQYVQHMLNKLITSEDVAADGHHLTPTQIYAYLARVMYKRRSDINPLWNSFVLSGV 155
Query: 135 --KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKC 189
K+G +LG V ++G F S +ATGFG HLA+P+LR + + L+ + ++LE C
Sbjct: 156 DPKDGTPFLGYVDLLGTTFTSSTIATGFGMHLAQPLLRKMVEGREDTLTEAEAKEVLENC 215
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
M+VL YRD ++N+ ++AK+T+EG IS+PY++ T WGF
Sbjct: 216 MKVLFYRDARSLNRFRVAKVTKEGCEISEPYSVPTSWGF 254
>gi|321473527|gb|EFX84494.1| hypothetical protein DAPPUDRAFT_99667 [Daphnia pulex]
Length = 262
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 148/217 (68%), Gaps = 2/217 (0%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
I RTQ P TGTS++ L + G+++A DM GSYGS +++S+ERI + ++LGA+G+I
Sbjct: 41 ITRTQSPVTTGTSILGLIFDGGVMLAGDMLGSYGSMAKFRSIERIIKVNNSTVLGATGDI 100
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+DFQ L +++ ++ ++ DDG +L PK LH++LTRV+YNRR+KFDPLWN+ ++ G+++
Sbjct: 101 ADFQHLQSIIEQKVIDEDCADDGFTLKPKALHTWLTRVLYNRRSKFDPLWNTFLVAGIED 160
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLL 194
G+ YLG V IG F DS +ATG+G H+A P++R+ E ++ E+ LL C+RVL
Sbjct: 161 GEPYLGCVDKIGTAFSDSKIATGYGAHIALPLMREGLEKKPQMTQEEARALLINCLRVLF 220
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAF 231
YRD A+NK QIA IT+EG TI L T W F
Sbjct: 221 YRDCRALNKHQIATITKEGVTIENNIELDTNWEVANF 257
>gi|402218071|gb|EJT98149.1| proteasome endopeptidase complex beta subunit [Dacryopinax sp.
DJM-731 SS1]
Length = 267
Score = 215 bits (547), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 153/218 (70%), Gaps = 3/218 (1%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
D +Q TQ P VTGTSV+A+KYKDGI+MAAD SYGS R+K + R+ +G+++L+GA
Sbjct: 38 TDGVQHTQQPIVTGTSVLAIKYKDGIMMAADCLASYGSLARFKDISRLHSVGQYTLIGAG 97
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
G++SDFQ L LD+L++ + +DG+ LGP E++ YL++VMY RR+K +PLWNSL++GG
Sbjct: 98 GDMSDFQYLQHLLDDLMIEEYTSEDGHKLGPDEIYHYLSQVMYARRSKMNPLWNSLLVGG 157
Query: 134 VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKCM 190
K+G+ ++G V ++G + S +ATG+G ++A+P+LR + ++ E+ ++++CM
Sbjct: 158 FKDGKSFVGYVDLLGTTYTASTLATGYGAYIAQPLLRRAVEGRETTMTEEEARAIIQECM 217
Query: 191 RVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
+VL YRD ++NK QIA +TE G I + +T W F
Sbjct: 218 KVLFYRDARSLNKFQIATVTERGVQIGDAISSETEWSF 255
>gi|77735487|ref|NP_001029438.1| proteasome subunit beta type-4 precursor [Bos taurus]
gi|108860906|sp|Q3T108.1|PSB4_BOVIN RecName: Full=Proteasome subunit beta type-4; Flags: Precursor
gi|74267624|gb|AAI02183.1| Proteasome (prosome, macropain) subunit, beta type, 4 [Bos taurus]
gi|296489544|tpg|DAA31657.1| TPA: proteasome subunit beta type-4 precursor [Bos taurus]
Length = 264
Score = 214 bits (546), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 152/214 (71%), Gaps = 2/214 (0%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
PI RTQ P VTGTSV+ LK++ G+++AADM GSYGS R++++ RI + ++LGASG
Sbjct: 41 SPITRTQNPMVTGTSVLGLKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASG 100
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+ +DFQ L + L ++++ + + DG+S PK +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 101 DYADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGY 160
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRV 192
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRV
Sbjct: 161 ADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
L YRD + N+ QIA +TE+G I P + +T W
Sbjct: 221 LYYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|440906737|gb|ELR56966.1| Proteasome subunit beta type-4 [Bos grunniens mutus]
Length = 261
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/214 (46%), Positives = 152/214 (71%), Gaps = 2/214 (0%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
PI RTQ P VTGTSV+ LK++ G+++AADM GSYGS R++++ RI + ++LGASG
Sbjct: 41 SPITRTQNPMVTGTSVLGLKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASG 100
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+ +DFQ L + L ++++ + + DG+S PK +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 101 DYADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGY 160
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRV 192
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRV
Sbjct: 161 ADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRV 220
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
L YRD + N+ QIA +TE+G I P + +T W
Sbjct: 221 LYYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|164656022|ref|XP_001729139.1| hypothetical protein MGL_3606 [Malassezia globosa CBS 7966]
gi|159103029|gb|EDP41925.1| hypothetical protein MGL_3606 [Malassezia globosa CBS 7966]
Length = 270
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 102/216 (47%), Positives = 150/216 (69%), Gaps = 5/216 (2%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
Q TQ P VTGTSV+ L YKDG+++A D SYGS R+ +++R+ G+ ++GASG++S
Sbjct: 43 QHTQQPIVTGTSVLGLTYKDGVMLATDTLASYGSLARFMNIQRLAQFGERVVIGASGDMS 102
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VK 135
D+Q + +L +L+ + M DG++L P ++++YL+R MY RR+K DP WN+LVLGG K
Sbjct: 103 DWQNIRHSLTKLMEKEEMESDGHTLTPAQMYAYLSRTMYERRSKLDPYWNALVLGGFDTK 162
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHE-NLSYEDGVKLLEKCMRV 192
+LG V ++G ++ S +ATGFG HLA+P+LR E E +L+ D +LE+CMRV
Sbjct: 163 TNAPFLGYVDLLGTTYQSSTIATGFGLHLAQPMLRKAVEGRETHLTENDARAILEECMRV 222
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
L YRD ++N+ QIAKIT +G IS+PY++ T WGF
Sbjct: 223 LFYRDARSLNRFQIAKITADGAHISEPYSVPTHWGF 258
>gi|71023555|ref|XP_762007.1| hypothetical protein UM05860.1 [Ustilago maydis 521]
gi|46101572|gb|EAK86805.1| hypothetical protein UM05860.1 [Ustilago maydis 521]
Length = 266
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 101/214 (47%), Positives = 151/214 (70%), Gaps = 5/214 (2%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
T P VTGTSV+ +KYKDGI++A D SYGS R+ + RI G+++L+GASG++SD+
Sbjct: 41 TSQPIVTGTSVLGIKYKDGIMLATDTLASYGSLARFMDITRISQFGQNTLIGASGDMSDW 100
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV--KNG 137
Q + L++LI +++ DG++L P ++++YL RVMY RR+K +PLWNS VLGGV K+G
Sbjct: 101 QYVQHMLNKLITSEDVAADGHNLTPTQIYAYLARVMYQRRSKINPLWNSFVLGGVDPKDG 160
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKCMRVLL 194
+LG V ++G F S +ATGFG HLA+P+LR + + L+ + ++LE CM+VL
Sbjct: 161 TPFLGYVDLLGTTFTSSTIATGFGLHLAQPLLRKMVEGREDTLTEAEAKEILENCMKVLF 220
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
YRD ++N+ +IAK+T +G IS+PY++ T WGF
Sbjct: 221 YRDARSLNRFRIAKVTRDGCEISEPYSVPTSWGF 254
>gi|426216582|ref|XP_004002540.1| PREDICTED: proteasome subunit beta type-4 [Ovis aries]
Length = 264
Score = 213 bits (543), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ LK++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGLKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S PK +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGDSFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|346986466|ref|NP_001231384.1| proteasome (prosome, macropain) subunit, beta type, 4 [Sus scrofa]
Length = 264
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 152/214 (71%), Gaps = 2/214 (0%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG
Sbjct: 41 SPITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASG 100
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+ +DFQ L + L ++++ + + DG+S PK +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 101 DYADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGY 160
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRV 192
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRV
Sbjct: 161 ADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQAEARELVERCMRV 220
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
L YRD + N+ QIA +TE+G I P + +T W
Sbjct: 221 LYYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|452822573|gb|EME29591.1| 20S proteasome subunit beta 7 [Galdieria sulphuraria]
Length = 234
Score = 213 bits (541), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 148/229 (64%), Gaps = 1/229 (0%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
DP++ T P VTG SV+ +K DG+++AAD SYGS R+++ R+ + LLG G
Sbjct: 6 DPVRHTTSPLVTGGSVIGIKCSDGVVIAADTLASYGSLARFQNFSRLLKVTDSCLLGGGG 65
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
EISDFQE+ R L+ L D ++D + P+ LH YL RV+Y +R++ +P WNSL++GG
Sbjct: 66 EISDFQEIQRLLENLTTQDFCFNDEHKKSPRSLHQYLGRVLYAQRSRLNPFWNSLIVGGY 125
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLL 194
Q +LGMV + G FE +A+GFG L P+LR + +L+ ++G+K++E+ RVL
Sbjct: 126 VQSQSFLGMVDLYGTTFESEVLASGFGVLLGLPLLRKAYRPDLTVQEGIKIVEEVYRVLF 185
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAG-AEGSW 242
YRD ++N++Q+A T +G TIS+PY+L+T W F F NP + E +W
Sbjct: 186 YRDARSINRIQVATATVDGVTISEPYSLETKWDFKGFVNPRSTYDESTW 234
>gi|403302685|ref|XP_003941984.1| PREDICTED: proteasome subunit beta type-4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403302687|ref|XP_003941985.1| PREDICTED: proteasome subunit beta type-4 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 264
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|284005520|ref|NP_001164776.1| proteasome subunit beta type-4 [Oryctolagus cuniculus]
gi|217030858|gb|ACJ74020.1| proteasome subunit beta type-4 (predicted) [Oryctolagus cuniculus]
Length = 261
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 101/226 (44%), Positives = 155/226 (68%), Gaps = 4/226 (1%)
Query: 3 SIQAKQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIK 62
S+ L G PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI
Sbjct: 31 SVDPASALCG--SPIARTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIM 88
Query: 63 PIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF 122
+ ++LGASG+ +DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K
Sbjct: 89 RVNNSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKM 148
Query: 123 DPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYE 180
+PLWN++V+GG +G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS
Sbjct: 149 NPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQA 208
Query: 181 DGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
+ +L+E+CMRVL YRD + N+ QIA +TE+G I P + +T W
Sbjct: 209 EARELVERCMRVLYYRDARSYNRYQIATVTEKGVEIEGPLSAETNW 254
>gi|344275428|ref|XP_003409514.1| PREDICTED: proteasome subunit beta type-4-like [Loxodonta africana]
Length = 264
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S PK +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ Q+A +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQVATVTEKGVEIEGPLSAETNW 254
>gi|169410926|gb|ACA57936.1| proteasome subunit beta type (predicted) [Callicebus moloch]
Length = 261
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|296228789|ref|XP_002759964.1| PREDICTED: proteasome subunit beta type-4 [Callithrix jacchus]
gi|166092117|gb|ABY82097.1| proteasome beta 4 subunit (predicted) [Callithrix jacchus]
Length = 264
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|55824566|gb|AAV66403.1| proteasome subunit beta-type 4 [Macaca fascicularis]
Length = 223
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 11 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 70
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 71 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 130
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL
Sbjct: 131 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARNLVERCMRVL 190
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 191 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 223
>gi|380798273|gb|AFE71012.1| proteasome subunit beta type-4, partial [Macaca mulatta]
Length = 246
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 24 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 83
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 84 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 143
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL
Sbjct: 144 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARNLVERCMRVL 203
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 204 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 236
>gi|345782656|ref|XP_533057.3| PREDICTED: proteasome subunit beta type-4 [Canis lupus familiaris]
Length = 264
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PVTRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|74140105|dbj|BAE33781.1| unnamed protein product [Mus musculus]
Length = 264
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 156/228 (68%), Gaps = 7/228 (3%)
Query: 6 AKQGLVGPND-----PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVER 60
A GL+ P PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ R
Sbjct: 27 APSGLMDPASAPCEGPITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISR 86
Query: 61 IKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRN 120
I + ++LGASG+ +DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+
Sbjct: 87 IMRVNDSTMLGASGDYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRS 146
Query: 121 KFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLS 178
K +PLWN++V+GG +G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS
Sbjct: 147 KMNPLWNTMVIGGYADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLS 206
Query: 179 YEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
+ +L+E+CMRVL YRD + N+ Q+A +TE+G I P + +T W
Sbjct: 207 QTEARELVERCMRVLYYRDARSYNRFQVATVTEKGVEIEGPLSAQTNW 254
>gi|384948334|gb|AFI37772.1| proteasome subunit beta type-4 [Macaca mulatta]
Length = 264
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARNLVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|281182898|ref|NP_001162425.1| proteasome subunit beta type-4 [Papio anubis]
gi|388454842|ref|NP_001252633.1| proteasome subunit beta type-4 [Macaca mulatta]
gi|163781022|gb|ABY40798.1| proteasome subunit, beta type, 4 (predicted) [Papio anubis]
gi|355558423|gb|EHH15203.1| hypothetical protein EGK_01262 [Macaca mulatta]
gi|355758207|gb|EHH61444.1| hypothetical protein EGM_19907 [Macaca fascicularis]
gi|387542932|gb|AFJ72093.1| proteasome subunit beta type-4 [Macaca mulatta]
Length = 264
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARNLVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|3915806|sp|P34067.2|PSB4_RAT RecName: Full=Proteasome subunit beta type-4; AltName:
Full=Macropain beta chain; AltName: Full=Multicatalytic
endopeptidase complex beta chain; AltName:
Full=Proteasome beta chain; AltName: Full=Proteasome
chain 3; Short=RN3; Flags: Precursor
Length = 263
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/219 (44%), Positives = 152/219 (69%), Gaps = 2/219 (0%)
Query: 10 LVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSL 69
+ P PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++
Sbjct: 35 MSAPARPITRTQNPMVTGTSVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTM 94
Query: 70 LGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
LGASG+ +DFQ L + L ++++ + ++ DG+S P+ +HS+LTR MY+RR+K +PLWN+
Sbjct: 95 LGASGDYADFQYLKQVLGQMVIDEELFGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTK 154
Query: 130 VLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLE 187
V+GG G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E
Sbjct: 155 VIGGYAGGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVE 214
Query: 188 KCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
+CMRVL YRD + N+ Q+A +TE+G I P + +T W
Sbjct: 215 RCMRVLYYRDARSYNRFQVATVTEKGVEIEGPLSAQTNW 253
>gi|297663654|ref|XP_002810285.1| PREDICTED: proteasome subunit beta type-4 isoform 1 [Pongo abelii]
gi|395729857|ref|XP_003775625.1| PREDICTED: proteasome subunit beta type-4 isoform 2 [Pongo abelii]
Length = 264
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|55588170|ref|XP_513795.1| PREDICTED: proteasome subunit beta type-4 isoform 3 [Pan
troglodytes]
gi|410033637|ref|XP_003949592.1| PREDICTED: proteasome subunit beta type-4 [Pan troglodytes]
gi|410033639|ref|XP_003949593.1| PREDICTED: proteasome subunit beta type-4 [Pan troglodytes]
gi|410301228|gb|JAA29214.1| proteasome (prosome, macropain) subunit, beta type, 4 [Pan
troglodytes]
gi|410332777|gb|JAA35335.1| proteasome (prosome, macropain) subunit, beta type, 4 [Pan
troglodytes]
Length = 264
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSTETNW 254
>gi|22538467|ref|NP_002787.2| proteasome subunit beta type-4 [Homo sapiens]
gi|397492784|ref|XP_003817300.1| PREDICTED: proteasome subunit beta type-4 isoform 1 [Pan paniscus]
gi|397492786|ref|XP_003817301.1| PREDICTED: proteasome subunit beta type-4 isoform 2 [Pan paniscus]
gi|397492788|ref|XP_003817302.1| PREDICTED: proteasome subunit beta type-4 isoform 3 [Pan paniscus]
gi|426331438|ref|XP_004026688.1| PREDICTED: proteasome subunit beta type-4 isoform 1 [Gorilla
gorilla gorilla]
gi|426331440|ref|XP_004026689.1| PREDICTED: proteasome subunit beta type-4 isoform 2 [Gorilla
gorilla gorilla]
gi|426331442|ref|XP_004026690.1| PREDICTED: proteasome subunit beta type-4 isoform 3 [Gorilla
gorilla gorilla]
gi|116242733|sp|P28070.4|PSB4_HUMAN RecName: Full=Proteasome subunit beta type-4; AltName: Full=26 kDa
prosomal protein; Short=HsBPROS26; Short=PROS-26;
AltName: Full=Macropain beta chain; AltName:
Full=Multicatalytic endopeptidase complex beta chain;
AltName: Full=Proteasome beta chain; AltName:
Full=Proteasome chain 3; Short=HsN3; Flags: Precursor
gi|208967170|dbj|BAG73599.1| proteasome (prosome, macropain) subunit, beta type 4 [synthetic
construct]
Length = 264
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSTETNW 254
>gi|332220284|ref|XP_003259287.1| PREDICTED: proteasome subunit beta type-4 isoform 1 [Nomascus
leucogenys]
gi|441635869|ref|XP_004089960.1| PREDICTED: proteasome subunit beta type-4 [Nomascus leucogenys]
gi|441635872|ref|XP_004089961.1| PREDICTED: proteasome subunit beta type-4 [Nomascus leucogenys]
Length = 264
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|48145757|emb|CAG33101.1| PSMB4 [Homo sapiens]
Length = 264
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSTETNW 254
>gi|254540082|ref|NP_032971.2| proteasome subunit beta type-4 precursor [Mus musculus]
gi|3914439|sp|P99026.1|PSB4_MOUSE RecName: Full=Proteasome subunit beta type-4; AltName: Full=Low
molecular mass protein 3; AltName: Full=Macropain beta
chain; AltName: Full=Multicatalytic endopeptidase
complex beta chain; AltName: Full=Proteasome beta chain;
AltName: Full=Proteasome chain 3; Flags: Precursor
gi|1762779|gb|AAC53263.1| beta proteasome subunit [Mus musculus]
gi|74212238|dbj|BAE40277.1| unnamed protein product [Mus musculus]
gi|148706807|gb|EDL38754.1| proteasome (prosome, macropain) subunit, beta type 4 [Mus musculus]
Length = 264
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAQTNW 254
>gi|14198355|gb|AAH08241.1| Proteasome (prosome, macropain) subunit, beta type 4 [Mus musculus]
Length = 264
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAQTNW 254
>gi|410968350|ref|XP_003990670.1| PREDICTED: proteasome subunit beta type-4 [Felis catus]
Length = 264
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PMTRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|354472995|ref|XP_003498722.1| PREDICTED: proteasome subunit beta type-4-like [Cricetulus griseus]
gi|344238737|gb|EGV94840.1| Proteasome subunit beta type-4 [Cricetulus griseus]
Length = 264
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|170118077|ref|XP_001890221.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164634767|gb|EDQ99088.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 224
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 151/212 (71%), Gaps = 3/212 (1%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
T+ P VTGTSV+A+KYKDGI+MAAD SYGS R+K ++R+ +G ++++GA G++SDF
Sbjct: 1 TRQPIVTGTSVLAIKYKDGIMMAADNLASYGSLARFKDIQRLHAVGSNTVIGAGGDMSDF 60
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
Q + LDEL++ + DG++LGP E+H YL +V+Y RR K +PLWNS+++GG K+GQ+
Sbjct: 61 QYIQNMLDELMIDEFTAQDGHALGPAEIHEYLAQVLYARRTKMNPLWNSILVGGFKDGQR 120
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHEN-LSYEDGVKLLEKCMRVLLYR 196
+L V ++G + S +ATG+G+++A+P+LR E E+ L+ + ++++E MRVL YR
Sbjct: 121 FLAYVDLLGTTYSASTLATGYGSYIAQPLLRKAVEGREDVLTEAEALEIIETSMRVLYYR 180
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
D ++NK Q+A IT EG I + +L T W F
Sbjct: 181 DARSLNKFQVATITAEGAKILESKSLDTSWSF 212
>gi|417398054|gb|JAA46060.1| Putative 20s proteasome regulatory subunit beta type psmb4/pre4
[Desmodus rotundus]
Length = 264
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLSQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTVVIGGYS 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQIEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|395325280|gb|EJF57705.1| proteasome endopeptidase complex beta subunit [Dichomitus squalens
LYAD-421 SS1]
Length = 264
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/215 (45%), Positives = 147/215 (68%), Gaps = 3/215 (1%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+QRTQ P VTGTSV+A++Y+DGI+MAAD SYGS R+K ++R+ +G +++GASG++
Sbjct: 38 VQRTQQPIVTGTSVLAIQYRDGIMMAADNLASYGSLARFKDIQRLHKVGTSTVIGASGDM 97
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
SDFQ + LDE++ + DG+ LGP E+H YL+RVMY+RR+K +PLWNS+++GG ++
Sbjct: 98 SDFQAIQTLLDEVVTDEFTHGDGHDLGPAEVHEYLSRVMYSRRSKINPLWNSILVGGFRD 157
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKCMRVL 193
G+++L V ++G + +ATG+G ++A P+LR D + L+ E+ LL CMRVL
Sbjct: 158 GKRFLAYVDLLGTTYSAPSIATGYGAYIAIPLLRAAVDGRVDELTEENARALLHDCMRVL 217
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
YRD +++K QIA + G IS L T W F
Sbjct: 218 FYRDARSLDKYQIATVNASGVHISDQIHLDTSWSF 252
>gi|149751451|ref|XP_001492367.1| PREDICTED: proteasome subunit beta type-4-like [Equus caballus]
Length = 264
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREILEKQPVLSQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|395855977|ref|XP_003800419.1| PREDICTED: proteasome subunit beta type-4 [Otolemur garnettii]
Length = 264
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RT P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTLNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMKVNDSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S PK +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEAQELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|196475700|gb|ACG76409.1| proteasome subunit beta type-4 precursor (predicted) [Otolemur
garnettii]
Length = 261
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RT P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTLNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMKVNDSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S PK +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEAQELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|392559700|gb|EIW52884.1| proteasome endopeptidase complex beta subunit [Trametes versicolor
FP-101664 SS1]
Length = 264
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 96/215 (44%), Positives = 147/215 (68%), Gaps = 3/215 (1%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+Q TQ P VTGTSV+A+ YKDGI+MAAD SYGS R+K ++R+ P+G +++GASG++
Sbjct: 38 VQHTQQPIVTGTSVLAIMYKDGIMMAADNLASYGSLARFKDIKRLHPVGTSTVIGASGDM 97
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
SDFQ + L+E++ + DG+ LGP E+H YL+RV+Y RR+K +PLWNS+++GG ++
Sbjct: 98 SDFQAIQSMLNEIVTDEFTHQDGHDLGPSEVHEYLSRVLYARRSKMNPLWNSILVGGFRD 157
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKCMRVL 193
G+++LG V ++G + +ATG+G+++A P+LR D + L + LL CMRVL
Sbjct: 158 GKRFLGYVDLLGTTYSAPSIATGYGSYIAIPLLRAAVDGKQDALGEAEARTLLHDCMRVL 217
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
YRD +++K Q+A +T G IS ++T W F
Sbjct: 218 FYRDARSLDKYQLATVTANGVQISDQIQIETQWSF 252
>gi|58332066|ref|NP_001011182.1| proteasome beta 4 subunit [Xenopus (Silurana) tropicalis]
gi|55778114|gb|AAH86496.1| proteasome (prosome macropain) subunit beta type 4 [Xenopus
(Silurana) tropicalis]
Length = 248
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P++ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + + ++LGASG+
Sbjct: 26 PVRHTLNPMVTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNESTILGASGD 85
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L + +D++++ + + DG++ PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 86 YADYQYLKQVIDQMVIDEELVGDGHNYSPKAVHSWLTRVMYNRRSKMNPLWNTVVIGGFY 145
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV FE +ATGFG +LA+P+LR+ E LS E+ L+E+CM+VL
Sbjct: 146 NGESFLGYVDKLGVAFEAPTIATGFGAYLAQPLLREVTERKATLSKEEARALIERCMKVL 205
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TE G + P + +T W
Sbjct: 206 YYRDARSYNRFEIATVTESGVEVEGPLSSETNW 238
>gi|89272522|emb|CAJ83434.1| proteasome (prosome macropain) subunit beta type 4 [Xenopus
(Silurana) tropicalis]
Length = 243
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P++ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + + ++LGASG+
Sbjct: 21 PVRHTLNPMVTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNESTILGASGD 80
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L + +D++++ + + DG++ PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 81 YADYQYLKQVIDQMVIDEELVGDGHNYSPKAVHSWLTRVMYNRRSKMNPLWNTVVIGGFY 140
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV FE +ATGFG +LA+P+LR+ E LS E+ L+E+CM+VL
Sbjct: 141 NGESFLGYVDKLGVAFEAPTIATGFGAYLAQPLLREVTERKATLSKEEARALIERCMKVL 200
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TE G + P + +T W
Sbjct: 201 YYRDARSYNRFEIATVTESGVEVEGPLSSETNW 233
>gi|26346308|dbj|BAC36805.1| unnamed protein product [Mus musculus]
Length = 264
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
Y+D + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYKDARSYNRFQIATVTEKGVEIEGPLSAQTNW 254
>gi|149030731|gb|EDL85768.1| proteasome (prosome, macropain) subunit, beta type 4 [Rattus
norvegicus]
Length = 264
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFDCGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 162 GGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ Q+A +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQVATVTEKGVEIEGPLSAQTNW 254
>gi|551547|gb|AAB31085.1| prosome beta-subunit [Homo sapiens]
gi|743649|prf||2013227A proteasome:SUBUNIT=beta
Length = 233
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 11 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 70
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 71 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 130
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL
Sbjct: 131 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVL 190
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ Q A +TE+G I P + +T W
Sbjct: 191 YYRDARSYNRFQTATVTEKGVEIEGPLSTETNW 223
>gi|565651|dbj|BAA05647.1| proteasome subunit HsN3 [Homo sapiens]
gi|30582673|gb|AAP35563.1| proteasome (prosome, macropain) subunit, beta type, 4 [Homo
sapiens]
gi|61359383|gb|AAX41710.1| proteasome subunit beta type 4 [synthetic construct]
gi|119573827|gb|EAW53442.1| proteasome (prosome, macropain) subunit, beta type, 4 [Homo
sapiens]
gi|123979690|gb|ABM81674.1| proteasome (prosome, macropain) subunit, beta type, 4 [synthetic
construct]
gi|123982410|gb|ABM82946.1| proteasome (prosome, macropain) subunit, beta type, 4 [synthetic
construct]
gi|123997073|gb|ABM86138.1| proteasome (prosome, macropain) subunit, beta type, 4 [synthetic
construct]
gi|189054053|dbj|BAG36560.1| unnamed protein product [Homo sapiens]
gi|1091573|prf||2021261A proteasome:SUBUNIT=HsN3
Length = 264
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ Q A +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQTATVTEKGVEIEGPLSTETNW 254
>gi|301767894|ref|XP_002919381.1| PREDICTED: proteasome subunit beta type-4-like [Ailuropoda
melanoleuca]
Length = 264
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 151/212 (71%), Gaps = 2/212 (0%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
I RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 43 ITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDY 102
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG +
Sbjct: 103 ADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYAD 162
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLL 194
G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 163 GESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLY 222
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 223 YRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|30584083|gb|AAP36290.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 4
[synthetic construct]
gi|61369443|gb|AAX43338.1| proteasome subunit beta type 4 [synthetic construct]
Length = 265
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ Q A +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQTATVTEKGVEIEGPLSTETNW 254
>gi|281352869|gb|EFB28453.1| hypothetical protein PANDA_007986 [Ailuropoda melanoleuca]
Length = 260
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 151/212 (71%), Gaps = 2/212 (0%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
I RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 43 ITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDY 102
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG +
Sbjct: 103 ADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYAD 162
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLL 194
G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 163 GESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLY 222
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 223 YRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|115923339|ref|XP_001177443.1| PREDICTED: proteasome subunit beta type-4-like [Strongylocentrotus
purpuratus]
Length = 255
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 149/213 (69%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P + T P VTGTS + +K+ G+++AADM GSYGS R++++ R+ + +++L +G+
Sbjct: 33 PAKHTLNPMVTGTSTLGMKFNGGVILAADMLGSYGSLARFRNISRVTKVNDNTVLTGAGD 92
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ + LD+ I+ D +DG+S PK L S+LTR+MYNRR+KF+P+WN++VLGG +
Sbjct: 93 YADFQYVSELLDQKIIDDECLNDGHSFTPKALFSWLTRIMYNRRSKFNPIWNTMVLGGFQ 152
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V IGV +E HVA G+G ++A P++RD E + N++ ++ ++E+C++VL
Sbjct: 153 NGESFLGYVDKIGVAYESPHVACGYGAYIALPMMRDAHEKNSNMTEQEARAVVERCLKVL 212
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + NK +IA +TE+G TI P + KT W
Sbjct: 213 FYRDARSFNKYEIAVVTEKGVTIDPPASSKTNW 245
>gi|390356174|ref|XP_795143.3| PREDICTED: proteasome subunit beta type-4-like [Strongylocentrotus
purpuratus]
Length = 255
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 149/213 (69%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P + T P VTGTS + +K+ G+++AADM GSYGS R++++ R+ + +++L +G+
Sbjct: 33 PAKHTLNPMVTGTSTLGMKFNGGVILAADMLGSYGSLARFRNISRVTKVNDNTVLTGAGD 92
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ + LD+ I+ D +DG+S PK L S+LTR+MYNRR+KF+P+WN++VLGG +
Sbjct: 93 YADFQFVSELLDQKIIDDECLNDGHSFTPKALFSWLTRIMYNRRSKFNPIWNTMVLGGFQ 152
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V IGV +E HVA G+G ++A P++RD E + N++ ++ ++E+C++VL
Sbjct: 153 NGESFLGYVDKIGVAYESPHVACGYGAYIALPMMRDAHEKNSNMTEQEARAVVERCLKVL 212
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + NK +IA +TE+G TI P + KT W
Sbjct: 213 FYRDARSFNKYEIAVVTEKGVTIDPPASSKTNW 245
>gi|395535937|ref|XP_003769977.1| PREDICTED: proteasome subunit beta type-4 [Sarcophilus harrisii]
Length = 264
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 154/213 (72%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + +++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVIIAADMLGSYGSLARFRNISRIMRVNNNTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ + + +D++++ + + DG+S PK +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYVKQVIDQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P++R+ E L+ + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPTLATGYGAYLAQPLMREFLEKKPVLNQAEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ ++A +TE+G + P + +T W
Sbjct: 222 YYRDARSYNRFEVATVTEKGVEVEGPLSAETNW 254
>gi|74205836|dbj|BAE23215.1| unnamed protein product [Mus musculus]
Length = 264
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+ +CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVGRCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAQTNW 254
>gi|74212099|dbj|BAE40213.1| unnamed protein product [Mus musculus]
Length = 264
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 150/212 (70%), Gaps = 2/212 (0%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
I RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 43 ITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDY 102
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG +
Sbjct: 103 ADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYAD 162
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLL 194
G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 163 GESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLY 222
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 223 YRDARSYNRFQIATVTEKGVEIEGPLSAQTNW 254
>gi|393230551|gb|EJD38155.1| proteasome endopeptidase complex, beta subunit [Auricularia
delicata TFB-10046 SS5]
Length = 265
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/218 (45%), Positives = 153/218 (70%), Gaps = 3/218 (1%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
D +QRTQ P VTGTSV+A +YKDG++MAAD SYGS R+K V+R+ P+G +++G G
Sbjct: 37 DGVQRTQQPIVTGTSVLAFRYKDGVIMAADNLASYGSLARFKDVQRLLPVGAFTVIGGGG 96
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
++SD Q++ L+ LI+ + DDG++LGP E++ YL++VMY RR+KFDP WNSL++GG
Sbjct: 97 DMSDLQQINHLLEGLIIDELCEDDGHALGPGEIYEYLSQVMYARRSKFDPFWNSLLVGGY 156
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD---EWHENLSYEDGVKLLEKCMR 191
+NG+ +L V ++G + + +ATG+G+ +A+P+LR E + E+ +++ +CM+
Sbjct: 157 QNGRSFLAYVDLLGTTYSATTLATGYGSMIAQPLLRKYVEGREEQIEEEEAKRIIAECMK 216
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
VL YRD ++NK QIA ITE+G +IS+ + T W F
Sbjct: 217 VLFYRDARSLNKYQIATITEKGISISESLSAPTEWSFA 254
>gi|307203533|gb|EFN82566.1| Proteasome subunit beta type-4 [Harpegnathos saltator]
Length = 251
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 147/214 (68%), Gaps = 3/214 (1%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
Q++Q P TGTSVV +++KDG+++AAD+ GSYGS RY+++ERI + + +LGASG+
Sbjct: 34 FQKSQSPITTGTSVVGIQFKDGVIIAADILGSYGSLARYRNLERIMKVNDNIILGASGDY 93
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+DFQ + N+++ IL + DDG SL PK LH +LTRVMYNRR+ FDP WN+ V+ G++N
Sbjct: 94 ADFQCIKSNIEKKILEEQCLDDGFSLKPKALHCWLTRVMYNRRSNFDPFWNNFVIAGLEN 153
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMRVLL 194
G+ +LG V +G + D +ATG+G ++A PILR + EN ++ E+ ++LL K M+VL
Sbjct: 154 GEPFLGTVDKLGTAYNDPVIATGYGAYMATPILRKAYEENSQMTKEEAIELLYKVMQVLF 213
Query: 195 YRDRSAVNKLQIAKI-TEEGTTISQPYALKTFWG 227
YRD + K I + E+G I P L+++WG
Sbjct: 214 YRDARSFPKYHIGIVMKEKGVEIQGPQTLESYWG 247
>gi|334324670|ref|XP_003340549.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-4-like
[Monodelphis domestica]
Length = 264
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 157/225 (69%), Gaps = 7/225 (3%)
Query: 9 GLVGPND-----PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKP 63
++GP+ PI RTQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI
Sbjct: 30 AVLGPDSIACAGPITRTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMR 89
Query: 64 IGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFD 123
+ +++LGASG+ +DFQ + + +D++++ + + DG+S PK +HS+LTR MY+RR+K +
Sbjct: 90 VNNNTMLGASGDYADFQYVKQVIDQMVIDEELLGDGHSYSPKAIHSWLTRAMYSRRSKMN 149
Query: 124 PLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYED 181
PLWN++V+GG +G+ +LG V M+GV +E +ATG+G +LA+P++R+ E + +
Sbjct: 150 PLWNTMVIGGYADGESFLGYVDMLGVAYEAPTLATGYGAYLAQPLMREVLEKKQFXKQAE 209
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
+L+E+CMRVL YRD + N+ +IA +TE+G + P + +T W
Sbjct: 210 ARELVERCMRVLYYRDARSYNRFEIATVTEKGVEVEGPLSAETNW 254
>gi|392874334|gb|AFM85999.1| proteasome beta 4 subunit [Callorhinchus milii]
Length = 259
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P + T P VTGTSV+ +K+ G+++AADM GSYG+ R++S+ R+ + + ++LGASG+
Sbjct: 37 PTRHTLNPMVTGTSVLGVKFDGGVILAADMLGSYGNMARFRSISRLMKVNECTVLGASGD 96
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L + ++++I+ + + DG+S PK LHS++TRVMYNRR+K +PLWN++++GGV
Sbjct: 97 YADYQYLKQVIEQMIINEELVGDGHSYSPKALHSWMTRVMYNRRSKMNPLWNTVIIGGVN 156
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E +ATGFG +LARP+LR+ E + NL+ + L+E+C++VL
Sbjct: 157 NGESFLGYVDKLGVAYEAPTLATGFGAYLARPLLREATEANPNLTKDMARNLIERCLKVL 216
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TE G I P + +T W
Sbjct: 217 YYRDARSYNRYEIATVTEAGVEIEGPLSTETNW 249
>gi|183637593|gb|ACC64595.1| proteasome subunit beta type-4 precursor (predicted) [Rhinolophus
ferrumequinum]
Length = 261
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/213 (45%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI TQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITHTQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNNTTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYS 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E L+ + +L+E+CMRVL
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLRETLEKQPVLNQTEARELVERCMRVL 221
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ QIA +TE+G I P + +T W
Sbjct: 222 YYRDARSYNRFQIATVTEKGVEIEGPLSAETNW 254
>gi|351702712|gb|EHB05631.1| Proteasome subunit beta type-4 [Heterocephalus glaber]
Length = 261
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 151/214 (70%), Gaps = 2/214 (0%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
DP+ RT P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG
Sbjct: 41 DPVTRTLNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASG 100
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+ +DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++++GG
Sbjct: 101 DYADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMIIGGC 160
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRV 192
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+++CMRV
Sbjct: 161 ADGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVKRCMRV 220
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
L YRD + N+ +IA +TE+G I P + +T W
Sbjct: 221 LYYRDARSYNRFEIATVTEKGVEIEGPLSAETNW 254
>gi|3915809|sp|P28024.2|PSB4_XENLA RecName: Full=Proteasome subunit beta type-4; AltName:
Full=Macropain beta chain; AltName: Full=Multicatalytic
endopeptidase complex beta chain; AltName:
Full=Proteasome beta chain; AltName: Full=Proteasome
chain 3; Flags: Precursor
Length = 242
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P++ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++++LGASG+
Sbjct: 20 PVRHTLNPMVTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTILGASGD 79
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L + +D++++ + + DG++ PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 80 YADYQYLKQVIDQMVIDEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFY 139
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E +ATGFG +LA+P+LR+ E LS E+ +L+++CM+VL
Sbjct: 140 NGESFLGYVDKLGVAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKVL 199
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +I +TE G + P + +T W
Sbjct: 200 YYRDARSYNRFEITTVTESGVEVEGPLSSETNW 232
>gi|363742919|ref|XP_427542.3| PREDICTED: proteasome subunit beta type-4 [Gallus gallus]
Length = 258
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P RT P VTGTSV+ +K++ GI++AADM GSYGS R++S+ R+ + ++LGASG+
Sbjct: 36 PYSRTLTPMVTGTSVLGVKFEGGIVIAADMMGSYGSLARFRSISRLLRVNDSTVLGASGD 95
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 96 YADFQYLTQIINQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKINPLWNTVVIGGFY 155
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V M+GV +E +ATG+G LA+P++R+ E +L E+ L+E+CM++L
Sbjct: 156 NGESFLGYVDMLGVAYEAPTLATGYGAALAQPLMREVLEKKPSLIKEEARDLIERCMKIL 215
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ ++A +TE+G + P L+ W
Sbjct: 216 YYRDARSFNRYEVAIVTEKGVEVEGPLTLEANW 248
>gi|13928866|ref|NP_113817.1| proteasome subunit beta type-4 [Rattus norvegicus]
gi|310214|gb|AAA42054.1| proteasome RN3 subunit [Rattus norvegicus]
Length = 232
Score = 206 bits (525), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/219 (43%), Positives = 150/219 (68%), Gaps = 2/219 (0%)
Query: 10 LVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSL 69
+ P I RTQ P +TGTSV+ +K+ G+++AADM GSYGS R++ + RI + ++
Sbjct: 4 MSAPARSITRTQNPMLTGTSVLGVKFDCGVVIAADMLGSYGSLARFRIISRIMRVNDSTM 63
Query: 70 LGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
LGASG+ +DFQ L + L ++++ + ++ DG+S P+ +HS+LTR MY+RR+K +PLWN+
Sbjct: 64 LGASGDYADFQYLKQVLGQMVIDEELFGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTK 123
Query: 130 VLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLE 187
V+GG G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E
Sbjct: 124 VIGGYAGGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVE 183
Query: 188 KCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
+CMRVL YRD + N+ Q+A +TE+G I P + +T W
Sbjct: 184 RCMRVLYYRDARSYNRFQVATVTEKGVEIEGPLSAQTNW 222
>gi|383854593|ref|XP_003702805.1| PREDICTED: proteasome subunit beta type-4-like [Megachile
rotundata]
Length = 256
Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 146/216 (67%), Gaps = 3/216 (1%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N QR+Q P TGTSVV +++KDGIL+AAD+ GSYGS R++++ER+ + + +LGA
Sbjct: 36 NGGFQRSQAPMTTGTSVVGIQFKDGILIAADVLGSYGSLARFRNLERVMKVNDNIILGAG 95
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
G+ +D+Q L R+++ IL + DDG SL PK LH +LTRVMYNRR+ FDP WN+ V+GG
Sbjct: 96 GDYADYQYLKRSIERKILEEQCLDDGLSLKPKSLHCWLTRVMYNRRSNFDPFWNNFVIGG 155
Query: 134 VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE--NLSYEDGVKLLEKCMR 191
++ Q +LG V +G + D +ATG+G ++A PILR + E N+S E+ ++LL K M+
Sbjct: 156 IEGDQLFLGTVDKLGTAYSDPVIATGYGAYMATPILRKAYEENKNMSKEEAIELLYKVMQ 215
Query: 192 VLLYRDRSAVNKLQIAKITEEGTT-ISQPYALKTFW 226
VL YRD + K Q+ IT++G I P L ++W
Sbjct: 216 VLFYRDARSFPKYQLGIITKDGNIEIQGPITLDSYW 251
>gi|327286564|ref|XP_003228000.1| PREDICTED: proteasome subunit beta type-4-like [Anolis
carolinensis]
Length = 271
Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 150/211 (71%), Gaps = 2/211 (0%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
Q + P VTGTSV+ +K+K G+++AADM GSYGS R++++ RI + ++LGASG+ +
Sbjct: 51 QCPRSPMVTGTSVLGVKFKGGVIIAADMLGSYGSLARFRNISRIMKVNDTTVLGASGDYA 110
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ L + ++++++ + + DG+S PK +HS+LTR MYNRR+K +PLWN++V+GG G
Sbjct: 111 DFQYLKQVVEQMVIDEELLGDGHSYSPKAIHSWLTRAMYNRRSKMNPLWNTVVIGGYAGG 170
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLY 195
+ +LG V M+GV +E +ATG+G+++A+P++RD E +L+ ED L+E+CM++L Y
Sbjct: 171 ESFLGYVDMLGVAYEAPSLATGYGSYVAQPLMRDAIEKKPSLTQEDARALIERCMKILYY 230
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
RD + N+ +I +TE+G + P +L T W
Sbjct: 231 RDARSFNRYEITTVTEKGVEVEGPLSLDTNW 261
>gi|387913998|gb|AFK10608.1| proteasome beta 4 subunit [Callorhinchus milii]
gi|392873778|gb|AFM85721.1| proteasome beta 4 subunit [Callorhinchus milii]
gi|392874112|gb|AFM85888.1| proteasome beta 4 subunit [Callorhinchus milii]
gi|392875066|gb|AFM86365.1| proteasome beta 4 subunit [Callorhinchus milii]
gi|392883432|gb|AFM90548.1| proteasome beta 4 subunit [Callorhinchus milii]
Length = 259
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P + T P VTGTSV+ +K+ G+++AADM GSYG+ R++S+ R+ + + ++LGASG+
Sbjct: 37 PTRHTLNPMVTGTSVLGVKFDGGVILAADMLGSYGNMARFRSISRLMKVNECTVLGASGD 96
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L + ++++I+ + + DG+S PK LHS++TRVMYNRR+K +PLWN++++GGV
Sbjct: 97 YADYQYLKQVIEQMIINEELVGDGHSYSPKALHSWMTRVMYNRRSKMNPLWNTVIIGGVN 156
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E +ATGFG +LA+P+LR+ E + NL+ + L+E+C++VL
Sbjct: 157 NGESFLGYVDKLGVAYEAPTLATGFGAYLAQPLLREATEANPNLTKDMARNLIERCLKVL 216
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TE G I P + +T W
Sbjct: 217 YYRDARSYNRYEIATVTEAGVEIEGPLSTETNW 249
>gi|148224895|ref|NP_001080890.1| proteasome subunit beta type-4 [Xenopus laevis]
gi|33417170|gb|AAH56119.1| Psmb4 protein [Xenopus laevis]
Length = 248
Score = 206 bits (523), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P++ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++++LGASG+
Sbjct: 26 PVRHTLNPMVTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTILGASGD 85
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L + +D++++ + + DG++ PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 86 YADYQYLKQVIDQMVIDEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFY 145
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E +ATGFG +LA+P+LR+ E LS E+ +L+++CM+VL
Sbjct: 146 NGESFLGYVDKLGVAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKVL 205
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +I +TE G + P + +T W
Sbjct: 206 YYRDARSYNRFEITTVTESGVEVEGPLSSETNW 238
>gi|328861198|gb|EGG10302.1| 20S proteasome subunit [Melampsora larici-populina 98AG31]
Length = 269
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 96/220 (43%), Positives = 148/220 (67%), Gaps = 8/220 (3%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+QRTQ P VTGTSV+ +KYK G+++AADM SYGS R+K ++R+ P+G+H+++GA G++
Sbjct: 40 VQRTQQPIVTGTSVLGVKYKGGVMLAADMLASYGSLARFKDIQRLIPVGEHTVVGAGGDL 99
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-- 134
SDFQ + + L+ ++ + + DDG+ L ++ YL RVMYNRR+K +PLWNS V+GGV
Sbjct: 100 SDFQYVKKMLEARMVEETLADDGHVLTTSQIFEYLARVMYNRRSKVNPLWNSFVVGGVEG 159
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE------NLSYEDGVKLLEK 188
+ G+ +L V ++G + +ATG+G+++A+P+LR + +L + K LE+
Sbjct: 160 RTGEPFLSYVDLLGTTYSSPSIATGYGSYIAQPMLRKVIDDLPNGCNDLEADVARKTLEE 219
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
CM+VL YRD ++NK QIA +T+ G IS P T W F
Sbjct: 220 CMKVLFYRDARSLNKFQIANVTKAGVEISGPIQAPTEWAF 259
>gi|392882234|gb|AFM89949.1| proteasome beta 4 subunit [Callorhinchus milii]
Length = 259
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 152/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P + T P VTGTSV+ +++ G+++AADM GSYG+ R++S+ R+ + + ++LGASG+
Sbjct: 37 PTRHTLNPMVTGTSVLGVRFDGGVILAADMLGSYGNMARFRSISRLMKVNECTVLGASGD 96
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L + ++++I+ + + DG+S PK LHS++TRVMYNRR+K +PLWN++++GGV
Sbjct: 97 YADYQYLKQVIEQMIINEELVGDGHSYSPKALHSWMTRVMYNRRSKMNPLWNTVIIGGVN 156
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E +ATGFG +LA+P+LR+ E + NL+ + L+E+C++VL
Sbjct: 157 NGESFLGYVDKLGVAYEAPTLATGFGAYLAQPLLREATEANPNLTKDMARNLIERCLKVL 216
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TE G I P + +T W
Sbjct: 217 YYRDARSYNRYEIATVTEAGVEIEGPLSTETNW 249
>gi|378792315|pdb|3UNB|M Chain M, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792329|pdb|3UNB|AA Chain a, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792343|pdb|3UNB|OO Chain o, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792357|pdb|3UNB|3 Chain 3, Mouse Constitutive 20s Proteasome In Complex With Pr-957
gi|378792371|pdb|3UNE|M Chain M, Mouse Constitutive 20s Proteasome
gi|378792385|pdb|3UNE|AA Chain a, Mouse Constitutive 20s Proteasome
gi|378792399|pdb|3UNE|OO Chain o, Mouse Constitutive 20s Proteasome
gi|378792413|pdb|3UNE|3 Chain 3, Mouse Constitutive 20s Proteasome
gi|378792427|pdb|3UNF|M Chain M, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792441|pdb|3UNF|AA Chain a, Mouse 20s Immunoproteasome In Complex With Pr-957
gi|378792455|pdb|3UNH|M Chain M, Mouse 20s Immunoproteasome
gi|378792469|pdb|3UNH|AA Chain a, Mouse 20s Immunoproteasome
Length = 219
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 148/209 (70%), Gaps = 2/209 (0%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
TQ P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++LGASG+ +DF
Sbjct: 1 TQNPMVTGTSVLGVKFDGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGDYADF 60
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
Q L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG +G+
Sbjct: 61 QYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGES 120
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRD 197
+LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL YRD
Sbjct: 121 FLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVLYYRD 180
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFW 226
+ N+ QIA +TE+G I P + +T W
Sbjct: 181 ARSYNRFQIATVTEKGVEIEGPLSAQTNW 209
>gi|229366882|gb|ACQ58421.1| Proteasome subunit beta type-4 precursor [Anoplopoma fimbria]
Length = 254
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 155/221 (70%), Gaps = 2/221 (0%)
Query: 8 QGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKH 67
+G P P++ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + +
Sbjct: 24 RGPAAPCGPVRHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLTRFRNISRLMKVNDN 83
Query: 68 SLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
++LGASG+ +D+Q L ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN
Sbjct: 84 TILGASGDYADYQHLKHIIEQMVIDEELLGDGHSYSPKAVHSWLTRVMYNRRSKMNPLWN 143
Query: 128 SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKL 185
++V+GG NG+ +LG V +GV +E VATGFG +LA+P++R+ E ++ ++ +L
Sbjct: 144 TVVIGGFYNGEGFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVLENKVEITKQEAREL 203
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
+E+C++VL YRD + N+ +IA +TEEG I P + +T W
Sbjct: 204 VERCLKVLYYRDARSYNRHEIAIVTEEGVEIIGPLSSETNW 244
>gi|350536361|ref|NP_001232242.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
gi|197129681|gb|ACH46179.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
gi|197129682|gb|ACH46180.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
gi|197129684|gb|ACH46182.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
gi|197129688|gb|ACH46186.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
Length = 271
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 148/215 (68%), Gaps = 4/215 (1%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P RT P VTGTSV+ LK+ G+++AAD GSYGS R++ + R+ + ++LGASG+
Sbjct: 47 PAGRTLSPMVTGTSVLGLKFSGGVMLAADTVGSYGSLARFRGISRLLKVNDSTVLGASGD 106
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
++DFQ L + L+++++ + + DG+S P+ LHS+LTRV+YNRR+K +PLWN++++ GV
Sbjct: 107 LADFQHLRQLLEQMVIDEELLGDGHSYSPRALHSWLTRVLYNRRSKINPLWNTVLIAGVY 166
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENL----SYEDGVKLLEKCMR 191
G+ +LG V M+GV +E +ATGFG +LA+P+LR E + + E+ +LLE+C+R
Sbjct: 167 GGESFLGYVDMLGVAYEAPSLATGFGAYLAQPLLRAELERDQDRLPTREEARELLERCLR 226
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
VL YRD + N+ ++A +TE+G + P L+ W
Sbjct: 227 VLYYRDARSFNRYEVATVTEKGVELEGPLTLEANW 261
>gi|47213154|emb|CAF93844.1| unnamed protein product [Tetraodon nigroviridis]
Length = 251
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P++ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + ++LGASG+
Sbjct: 32 PVRHTLNPMVTGTSVLGVKFSGGVIIAADMLGSYGSLARFRNISRLMKVNDSTILGASGD 91
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L R ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 92 YADYQYLKRVIEQMVIDEELLGDGHSYSPKAVHSWLTRVMYNRRSKMNPLWNTVVIGGFY 151
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
G+ +LG V +GV +E VATGFG +LA+P++R+ E LS ++ L+E+C++VL
Sbjct: 152 KGESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREAVENKPELSKQEARDLIERCLKVL 211
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TEEG I P + +T W
Sbjct: 212 YYRDARSYNRYEIAIVTEEGVEIISPLSSETNW 244
>gi|197129686|gb|ACH46184.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
Length = 271
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 148/215 (68%), Gaps = 4/215 (1%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P RT P VTGTSV+ LK+ G+++AAD GSYGS R++ + R+ + ++LGASG+
Sbjct: 47 PAGRTLSPMVTGTSVLGLKFSGGVMLAADTVGSYGSLARFRGISRLLKVNDSTVLGASGD 106
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
++DFQ L + L+++++ + + DG+S P+ LHS+LTRV+YNRR+K +PLWN++++ GV
Sbjct: 107 LADFQHLRQLLEQMVIDEELLGDGHSYSPRALHSWLTRVLYNRRSKINPLWNTVLIAGVY 166
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENL----SYEDGVKLLEKCMR 191
G+ +LG V M+GV +E +ATGFG +LA+P+LR E + + E+ +LLE+C+R
Sbjct: 167 GGESFLGYVDMLGVAYEAPSLATGFGAYLAQPLLRAELERDQDRLPTREEARELLERCLR 226
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
VL YRD + N+ ++A +TE+G + P L+ W
Sbjct: 227 VLYYRDARSFNRYEVAMVTEKGVELEGPLTLEANW 261
>gi|156382256|ref|XP_001632470.1| predicted protein [Nematostella vectensis]
gi|156219526|gb|EDO40407.1| predicted protein [Nematostella vectensis]
Length = 262
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 149/214 (69%), Gaps = 2/214 (0%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
+P++RT P TGTSV+ +K+ G+LMAAD GSYGS RY+++ R+ + +++++GA+G
Sbjct: 39 EPVKRTMYPTTTGTSVLGIKFNGGVLMAADTLGSYGSLARYRNISRLMRVNENTIIGAAG 98
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+ +DFQ + L++ ++ D DG+ PK + S+LTR MY RR KFDPLWN +++GG+
Sbjct: 99 DYADFQYIKSVLEQKVIDDACLADGHGYTPKSIFSWLTRTMYYRRTKFDPLWNQIIVGGI 158
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE--NLSYEDGVKLLEKCMRV 192
+ G+ +LG V IG+ +E +A+GFG +LA+P+LRD + + N+S E+ KLL +C++V
Sbjct: 159 EKGESFLGFVDKIGIAYEAPTLASGFGAYLAQPLLRDAYEKNPNMSEEEARKLLVECLKV 218
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
L YRD ++N+ +IA IT++GT + + + T W
Sbjct: 219 LFYRDGRSLNRFEIAVITKDGTKVEEAQSADTNW 252
>gi|197129687|gb|ACH46185.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
Length = 271
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 148/215 (68%), Gaps = 4/215 (1%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P RT P VTGTSV+ LK+ G+++AAD GSYGS R++ + R+ + ++LGASG+
Sbjct: 47 PAGRTLSPMVTGTSVLGLKFSGGVMLAADTVGSYGSLARFRGISRLLKVNDSTVLGASGD 106
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
++DFQ L + L+++++ + + DG+S P+ LHS+LTRV+YNRR+K +PLWN++++ GV
Sbjct: 107 LADFQYLRQLLEQMVIDEELLGDGHSYSPRALHSWLTRVLYNRRSKINPLWNTVLIAGVY 166
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENL----SYEDGVKLLEKCMR 191
G+ +LG V M+GV +E +ATGFG +LA+P+LR E + + E+ +LLE+C+R
Sbjct: 167 GGESFLGYVDMLGVAYEAPSLATGFGAYLAQPLLRAELERDQDRLPTREEARELLERCLR 226
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
VL YRD + N+ ++A +TE+G + P L+ W
Sbjct: 227 VLYYRDARSFNRYEVATVTEKGVELEGPLTLEANW 261
>gi|387017852|gb|AFJ51044.1| Proteasome subunit beta type-4-like [Crotalus adamanteus]
Length = 256
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 152/211 (72%), Gaps = 2/211 (0%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
+RT P VTGTSV+ LK++ G+++AAD GSYGS R++++ RI + ++LGASG+ +
Sbjct: 36 KRTLSPMVTGTSVLGLKFEGGVMIAADTLGSYGSLARFRNLSRIMKVNDSTVLGASGDYA 95
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ L + L+++++ +++ DG+S PK +HS+LTRVMYN R+K +PLWN++V+GG +G
Sbjct: 96 DFQYLKQVLEQMVIDEDLLGDGHSYSPKAIHSWLTRVMYNHRSKLNPLWNTVVIGGYSHG 155
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLY 195
+ +LG V M+GV +E +ATG+G+++A+P++R+ E +LS + L+E+CMR+L Y
Sbjct: 156 EGFLGYVDMLGVAYEAPSLATGYGSYVAQPLMREALEKTPSLSQQAARALIERCMRILYY 215
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
RD + N+ +I +TE+G + P +L+T W
Sbjct: 216 RDARSFNRYEITTVTEKGVEVEGPLSLETNW 246
>gi|340724608|ref|XP_003400673.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-4-like
[Bombus terrestris]
Length = 268
Score = 203 bits (516), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 145/214 (67%), Gaps = 3/214 (1%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+QR+Q P TGTSVV +++KDG+L+AAD+ GSYGS R++++ER+ + + +LGA G+
Sbjct: 51 LQRSQAPMTTGTSVVGIQFKDGVLIAADILGSYGSLARFRNLERVMKVNDNIILGAGGDY 110
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+D+Q L N++ IL + DDG SL PK LH +LT+VMYNRR++FDP WN+ ++GG++
Sbjct: 111 ADYQCLKSNIERKILEEECLDDGLSLKPKALHCWLTQVMYNRRSRFDPFWNNFIIGGLEG 170
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMRVLL 194
+ +LG V +G + D +ATG+G ++A PILR + EN ++ E V+LL K M+VL
Sbjct: 171 DKLFLGTVDKLGTGYSDPVIATGYGAYMATPILRKAYEENKEMTKEQAVELLYKVMQVLF 230
Query: 195 YRDRSAVNKLQIAKITEE-GTTISQPYALKTFWG 227
YRD + K Q+ IT E G I P L ++WG
Sbjct: 231 YRDARSFPKYQLGIITREGGVEIQGPLTLDSYWG 264
>gi|21465655|pdb|1IRU|N Chain N, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
gi|21465669|pdb|1IRU|2 Chain 2, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 219
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 147/209 (70%), Gaps = 2/209 (0%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
TQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+ +DF
Sbjct: 1 TQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGDYADF 60
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
Q L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG +G+
Sbjct: 61 QYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYADGES 120
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRD 197
+LG V M+GV +E +ATG+G +LA+P+LR+ E LS + L+E+CMRVL YRD
Sbjct: 121 FLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARDLVERCMRVLYYRD 180
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFW 226
+ N+ Q A +TE+G I P + +T W
Sbjct: 181 ARSYNRFQTATVTEKGVEIEGPLSTETNW 209
>gi|350397633|ref|XP_003484937.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-4-like
[Bombus impatiens]
Length = 268
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 145/214 (67%), Gaps = 3/214 (1%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+QR+Q P TGTSVV +++KDG+L+AAD+ GSYGS R++++ER+ + + +LGA G+
Sbjct: 51 LQRSQAPMTTGTSVVGIQFKDGVLIAADILGSYGSLARFRNLERVMKVNDNIILGAGGDY 110
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+D+Q L N++ IL + DDG SL PK LH +LT+VMYNRR++FDP WN+ ++GG++
Sbjct: 111 ADYQCLKSNIERKILEEECLDDGLSLKPKALHCWLTQVMYNRRSRFDPFWNNFIIGGLEG 170
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMRVLL 194
+ +LG V +G + D +ATG+G ++A PILR + EN ++ E V+LL K M+VL
Sbjct: 171 DKLFLGTVDKLGTGYSDPVIATGYGAYMATPILRKAYEENKEMTKEQAVELLYKVMQVLF 230
Query: 195 YRDRSAVNKLQIAKITEE-GTTISQPYALKTFWG 227
YRD + K Q+ IT E G I P L ++WG
Sbjct: 231 YRDARSFPKYQLGIITREGGVEIQGPLTLDSYWG 264
>gi|392877876|gb|AFM87770.1| proteasome beta 4 subunit [Callorhinchus milii]
Length = 259
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P + T P VTGTSV+ +K+ G+ +AADM GSYG+ R++S+ R+ + + ++LGASG+
Sbjct: 37 PTRHTLNPMVTGTSVLGVKFDGGVTLAADMLGSYGNMARFRSISRLMKVNECTVLGASGD 96
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L + ++++I+ + + DG+S PK LHS++TRVMYNRR+K +PLWN++++GGV
Sbjct: 97 YADYQYLKQVIEQMIINEELVGDGHSYSPKALHSWMTRVMYNRRSKMNPLWNTVIIGGVN 156
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E +ATG G +LA+P+LR+ E + NL+ + L+E+C++VL
Sbjct: 157 NGESFLGYVDKLGVAYEAPTLATGIGAYLAQPLLREATEANPNLTKDMARNLIERCLKVL 216
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TE G I P + +T W
Sbjct: 217 YYRDARSYNRYEIATVTEAGVEIEGPLSTETNW 249
>gi|348539598|ref|XP_003457276.1| PREDICTED: proteasome subunit beta type-4-like [Oreochromis
niloticus]
Length = 259
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 153/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P++ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + +++LGASG+
Sbjct: 37 PVRHTLNPMVTGTSVLGVKFTGGVVIAADMLGSYGSLARFRNISRLMKVNNNTILGASGD 96
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L + ++++++ + + DG+S PK +HS+LTRVMYNRR++ +PLWN++V+GG
Sbjct: 97 YADYQHLKQVIEQMVIDEELLGDGHSYSPKAVHSWLTRVMYNRRSRMNPLWNTVVIGGFY 156
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E VATGFG +LA+P++R+ E ++ ++ +L+E+C++VL
Sbjct: 157 NGESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKAEITKQEARELVERCLKVL 216
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TEEG I P + +T W
Sbjct: 217 YYRDARSYNRHEIAIVTEEGVEILGPLSSETNW 249
>gi|345314350|ref|XP_001520498.2| PREDICTED: proteasome subunit beta type-4-like [Ornithorhynchus
anatinus]
Length = 278
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 147/206 (71%), Gaps = 2/206 (0%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + + ++LGASG+ +DFQ L
Sbjct: 63 PMVTGTSVLGVKFDGGVMIAADMLGSYGSLARFRNISRIMRVNETTVLGASGDYADFQYL 122
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
+ +D++++ + + DG+S PK LHS+LTR MY+RR+K +PLWN++V+GG +GQ +LG
Sbjct: 123 KQVIDQMVIDEELLGDGHSYSPKALHSWLTRAMYSRRSKMNPLWNTVVIGGFADGQSFLG 182
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
V M+GV +E +ATG+G +LA+P+LR+ E S + +L+++CMRVL YRD +
Sbjct: 183 YVDMLGVAYEAPSLATGYGAYLAQPLLREALEKQPVPSQAEARELVDRCMRVLYYRDARS 242
Query: 201 VNKLQIAKITEEGTTISQPYALKTFW 226
N+ +IA +TE+G + P + +T W
Sbjct: 243 YNRFEIATVTEKGVEVEGPLSSETNW 268
>gi|392876604|gb|AFM87134.1| proteasome beta 4 subunit [Callorhinchus milii]
Length = 259
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P + T P VTGTSV+ +K+ G+++AADM GSYG+ R++S+ R+ + + ++LGASG+
Sbjct: 37 PTRHTLNPMVTGTSVLGVKFDGGVILAADMLGSYGNMARFRSISRLMKVNECTVLGASGD 96
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L + ++++I+ + + DG+S PK LHS++TRVMYNRR+K +PLWN++++GGV
Sbjct: 97 YADYQYLKQVIEQMIINEELVGDGHSYSPKALHSWMTRVMYNRRSKMNPLWNTVIIGGVN 156
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E +ATGFG +LA+P+LR+ E + NL+ + L+E+C++VL
Sbjct: 157 NGESFLGYVDKLGVAYEAPTLATGFGAYLAQPLLREATEANPNLTKDMARNLIERCLKVL 216
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TE G I + +T W
Sbjct: 217 YYRDARSYNRYEIATVTEAGVEIEGLLSTETNW 249
>gi|259089494|ref|NP_001158547.1| Proteasome subunit beta type 4 [Oncorhynchus mykiss]
gi|225704766|gb|ACO08229.1| Proteasome subunit beta type 4 precursor [Oncorhynchus mykiss]
Length = 256
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI+ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + ++LGASG+
Sbjct: 34 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDTTILGASGD 93
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q + + ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 94 YADYQYMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVVGGFY 153
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E VATGFG +LA+P++R+ E ++ ++ L+E+C++VL
Sbjct: 154 NGESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIERCLKVL 213
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TEEG I P + +T W
Sbjct: 214 YYRDARSYNRHEIAIVTEEGVEIVGPMSCETNW 246
>gi|410911442|ref|XP_003969199.1| PREDICTED: proteasome subunit beta type-4-like [Takifugu rubripes]
Length = 258
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P++ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + ++LGASG+
Sbjct: 36 PVRHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNNSTILGASGD 95
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L + ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 96 YADYQYLKQVIEQMVIDEELLGDGHSYSPKAVHSWLTRVMYNRRSKMNPLWNTVVIGGFY 155
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
G+ +LG V +GV +E VATGFG +LA+P++R+ E +S ++ L+E+C++VL
Sbjct: 156 GGESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKAEISKQEARDLIERCLKVL 215
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TEEG I P + +T W
Sbjct: 216 YYRDARSYNRYEIAIVTEEGVEIVGPLSSETNW 248
>gi|392877804|gb|AFM87734.1| proteasome beta 4 subunit [Callorhinchus milii]
Length = 259
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P + T VTGTSV+ +K+ G+++AADM GSYG+ R++S+ R+ + + ++LGASG+
Sbjct: 37 PTRHTLNHMVTGTSVLGVKFDGGVILAADMLGSYGNMARFRSISRLMKVNECTVLGASGD 96
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L + ++++I+ + + DG+S PK LHS++TRVMYNRR+K +PLWN++++GGV
Sbjct: 97 YADYQYLKQVIEQMIINEELVGDGHSYSPKALHSWMTRVMYNRRSKMNPLWNTVIIGGVN 156
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E +ATGFG +LA+P+LR+ E + NL+ + L+E+C++VL
Sbjct: 157 NGESFLGYVDKLGVAYEAPTLATGFGAYLAQPLLREATEANPNLTKDMARNLIERCLKVL 216
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TE G I P + +T W
Sbjct: 217 YYRDARSYNRYEIATVTEAGVEIEGPLSPETNW 249
>gi|380022363|ref|XP_003695019.1| PREDICTED: proteasome subunit beta type-4-like [Apis florea]
Length = 256
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 144/214 (67%), Gaps = 3/214 (1%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
QR+Q P TGTSVV +++K+GIL+A D+ GSYGS RY+++ER+ + + +LGA G+
Sbjct: 39 FQRSQAPMTTGTSVVGIQFKNGILIATDILGSYGSLARYRNLERVMKVNDNIILGAGGDY 98
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+D+Q L +++ IL + DDG SL PK LH +LTRV+YNRR++FDP WN+ ++GG++
Sbjct: 99 ADYQCLKSHIERKILEEECLDDGLSLKPKALHCWLTRVLYNRRSQFDPFWNNFIIGGLEG 158
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMRVLL 194
+ +LG V +G + D +ATG+G ++A PILR + EN +S E ++LL K M+VL
Sbjct: 159 DKLFLGTVDKLGTAYSDPVIATGYGAYMATPILRKAYEENKEMSKEQAIELLYKVMQVLY 218
Query: 195 YRDRSAVNKLQIAKIT-EEGTTISQPYALKTFWG 227
YRD + K Q+ IT EEG I P L ++WG
Sbjct: 219 YRDARSFPKYQVGVITREEGVEIQGPLTLDSYWG 252
>gi|320168542|gb|EFW45441.1| proteasome beta 4 subunit [Capsaspora owczarzaki ATCC 30864]
Length = 268
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 150/220 (68%), Gaps = 3/220 (1%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P + T P VTGTSV+A+KY G+++AAD GSYGS +++++ R+ +G +LL SG+
Sbjct: 46 PTRHTSNPIVTGTSVLAIKYAGGVVVAADTCGSYGSLAKFRNISRMNTVGSKTLLAMSGD 105
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q + + LD+L++ D +DG+ L + SYL+RVMYNRR+K DPLWN+ V+ G
Sbjct: 106 YADYQYVKKTLDDLVIEDECVNDGHQLSSSSIFSYLSRVMYNRRSKIDPLWNTFVVAGSS 165
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEW--HENLSYEDGVKLLEKCMRVL 193
NGQ +LG V +GV + ++H+ATG+G ++A P++RD + + N++ E ++ +C++V+
Sbjct: 166 NGQPFLGTVDKVGVAYTENHIATGYGAYMALPLMRDAYAANPNMTLEQAQTVINECLKVM 225
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF-TAFQ 232
YRD + N+ ++A IT +G +ISQPY L T W T FQ
Sbjct: 226 YYRDARSWNQYEMAVITNDGVSISQPYTLPTDWSIATMFQ 265
>gi|307169438|gb|EFN62137.1| Proteasome subunit beta type-4 [Camponotus floridanus]
Length = 251
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 144/214 (67%), Gaps = 3/214 (1%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
Q++Q P TGTSV+ +K+KDG+++AAD+ GSYGS RY+++ERI + +++LGASG+
Sbjct: 34 FQKSQSPITTGTSVIGIKFKDGVIIAADVLGSYGSLARYRNLERIMKVNDNTILGASGDY 93
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+DFQ + ++ IL + DDG SL PK LH +LTRVMYNRR+ FDP WN+ V+ G+++
Sbjct: 94 ADFQCIKSYVERKILEEKCLDDGFSLKPKALHCWLTRVMYNRRSNFDPFWNNFVIAGLED 153
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMRVLL 194
+ +L V +G + D +ATG+G ++A P+LR + EN +S E+ ++LL K M+VL
Sbjct: 154 EKPFLATVDKLGTAYSDPVIATGYGAYMATPVLRKAYEENSEMSKEEAIELLYKVMQVLF 213
Query: 195 YRDRSAVNKLQIAKIT-EEGTTISQPYALKTFWG 227
YRD + K + IT E+G I P L ++WG
Sbjct: 214 YRDARSFPKYHLGIITKEKGVEIQGPITLDSYWG 247
>gi|328785112|ref|XP_394993.2| PREDICTED: proteasome subunit beta type-4-like [Apis mellifera]
Length = 267
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 144/213 (67%), Gaps = 3/213 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QR+Q P TGTSVV +++K+GIL+A D+ GSYGS RY+++ER+ + + +LGA G+ +
Sbjct: 51 QRSQAPMTTGTSVVGIQFKNGILIATDILGSYGSLARYRNLERVMKVNDNIILGAGGDYA 110
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
D+Q L +++ IL + DDG SL PK LH +LTRV+YNRR++FDP WN+ ++GG++
Sbjct: 111 DYQCLKSHIERKILEEECLDDGLSLKPKALHCWLTRVLYNRRSQFDPFWNNFIIGGLEGD 170
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMRVLLY 195
+ +LG V +G + D +ATG+G ++A PILR + EN +S E ++LL K M+VL Y
Sbjct: 171 KLFLGTVDKLGTAYSDPVIATGYGAYMATPILRKAYEENKEMSKEQAIELLYKVMQVLYY 230
Query: 196 RDRSAVNKLQIAKIT-EEGTTISQPYALKTFWG 227
RD + K Q+ IT EEG I P L ++WG
Sbjct: 231 RDARSFPKYQVGVITREEGVEIQGPLTLDSYWG 263
>gi|290991777|ref|XP_002678511.1| proteasome subunit beta [Naegleria gruberi]
gi|284092124|gb|EFC45767.1| proteasome subunit beta [Naegleria gruberi]
Length = 198
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/198 (45%), Positives = 137/198 (69%), Gaps = 6/198 (3%)
Query: 40 LMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDG 99
++ +D GSYGS R++SVER++ +G ++L+GASGE SDFQ ++ L++L+ D DD
Sbjct: 1 MLCSDTLGSYGSLARFRSVERLRKVGNNTLIGASGEYSDFQYIVDLLEKLVDKDFCADDK 60
Query: 100 NSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATG 159
PK + YL R+MYNRRNKF+PLWN+L++ GVK+G+ +LG ++G NFED +A+G
Sbjct: 61 IETQPKAIFQYLVRIMYNRRNKFNPLWNTLIVAGVKDGKSFLGYTDLLGSNFEDDTMASG 120
Query: 160 FGNHLARPILRDEWHE------NLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEG 213
+G +LA+PILR E N++ ++ +LEKCM+VL YRD ++NK+QIA E G
Sbjct: 121 YGAYLAKPILRKFLDEKGGDVNNITEQEAKDVLEKCMKVLYYRDARSINKIQIATANETG 180
Query: 214 TTISQPYALKTFWGFTAF 231
+++PY+L+T W F F
Sbjct: 181 LNVTEPYSLQTEWAFKGF 198
>gi|388582567|gb|EIM22871.1| proteasome endopeptidase complex, beta subunit [Wallemia sebi CBS
633.66]
Length = 274
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 152/217 (70%), Gaps = 5/217 (2%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+Q+TQ P VTGTSV+ LKYKDGI++AAD SYGS R+K ++R+ +G ++++GA+G++
Sbjct: 46 VQKTQQPIVTGTSVIGLKYKDGIMLAADNLASYGSLARFKDIQRLYGVGDNTVIGAAGDM 105
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-- 134
SDFQ + L+ L + + DDG++LGP +++ YL+ +MY+RR++ +PLWN+ V+GGV
Sbjct: 106 SDFQHVQHELESLFIDEYCNDDGHTLGPAQIYEYLSTLMYHRRSQLNPLWNAFVVGGVDP 165
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKCMR 191
K+G+ L V ++G + + TG+ + +A P+LR ++ E + E+ +++++ CM+
Sbjct: 166 KSGESTLAYVDLLGTTYSAKTIGTGYASMIAIPLLRRLVEDREEPPNEEEALEIIKTCMK 225
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
VL YRD ++NK Q+AKIT+ G IS +++T WGF
Sbjct: 226 VLFYRDARSLNKFQVAKITKSGADISPSMSVETEWGF 262
>gi|432881057|ref|XP_004073784.1| PREDICTED: proteasome subunit beta type-4-like [Oryzias latipes]
Length = 259
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 153/213 (71%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P++ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + +++LGASG+
Sbjct: 37 PVRHTLNPMVTGTSVLGVKFAGGVIIAADMLGSYGSLARFRNISRLMKVNDNTILGASGD 96
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+++Q L + ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++VLGG
Sbjct: 97 YANYQYLKQVIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVLGGFY 156
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E VATGFG +LA+P++R+ E +++ ++ L+E+C++VL
Sbjct: 157 NGESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKADITKQEARDLIERCLKVL 216
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TE+G I P + +T W
Sbjct: 217 YYRDARSYNRHEIAIVTEQGVEIIGPLSSETNW 249
>gi|65024|emb|CAA44593.1| proteasome beta subunit [Xenopus laevis]
Length = 215
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 147/204 (72%), Gaps = 2/204 (0%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
VTGTSV+ +K+ G+++AADM GSYGS R++++ RI + ++++LGASG+ +D+Q L +
Sbjct: 2 VTGTSVLGVKFDGGVIIAADMLGSYGSLARFRNISRIMKVNENTILGASGDYADYQYLKQ 61
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+D++++ + + DG++ PK +HS+LTRVMYNRR+K +PLWN++V+GG NG+ +LG V
Sbjct: 62 VIDQMVIDEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGESFLGYV 121
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+GV +E +ATGFG +LA+P+LR+ E LS E+ +L+++CM+VL YRD + N
Sbjct: 122 DKLGVAYEAPTIATGFGAYLAQPLLREVTENKATLSKEEARQLVDRCMKVLYYRDARSYN 181
Query: 203 KLQIAKITEEGTTISQPYALKTFW 226
+ +I +TE G + P + +T W
Sbjct: 182 RFEITTVTESGVEVEGPLSSETNW 205
>gi|326933508|ref|XP_003212845.1| PREDICTED: proteasome subunit beta type-4-like [Meleagris
gallopavo]
Length = 215
Score = 200 bits (508), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 147/204 (72%), Gaps = 2/204 (0%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
VTG SV+ +K++ G+++AADM GSYGS R++S+ R+ + ++LGASG+ +DFQ L +
Sbjct: 2 VTGASVLGVKFEGGVVIAADMMGSYGSLARFRSISRLLRVNDSTVLGASGDYADFQYLTQ 61
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG NG+ +LG V
Sbjct: 62 VINQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKINPLWNTVVIGGFYNGESFLGYV 121
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
M+GV +E +ATG+G +LA+P++R+ E +L+ E+ L+E+CM++L YRD + N
Sbjct: 122 DMLGVAYEAPTLATGYGAYLAQPLMRETLEKKPSLTKEEARDLIERCMKILYYRDARSFN 181
Query: 203 KLQIAKITEEGTTISQPYALKTFW 226
+ ++A +TE+G + P L+ W
Sbjct: 182 RYEVATVTEKGVEVEGPLTLEANW 205
>gi|443920720|gb|ELU40578.1| proteasome beta 4 subunit [Rhizoctonia solani AG-1 IA]
Length = 312
Score = 199 bits (507), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/229 (42%), Positives = 149/229 (65%), Gaps = 23/229 (10%)
Query: 23 PYVTGTSVVALKYKDGILMAAD--------------------MGGSYGSTIRYKSVERIK 62
P VTGTSV+ +++KDG+++AAD M SYGS R+K + R+
Sbjct: 72 PIVTGTSVLGIRFKDGVMLAADNLGWYGSDHVCTVTKPRFIRMIASYGSLARFKDIRRLH 131
Query: 63 PIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF 122
P+G ++++GA G++SDFQ L LD L++ ++ +DG+ LGPKE++ YL+RVMY RR+K
Sbjct: 132 PVGNYTVIGAGGDMSDFQYLQHLLDNLMIEESNEEDGHELGPKEIYEYLSRVMYARRSKI 191
Query: 123 DPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHE-NLSY 179
+PLWNS+++GG K+ Q +LG V ++G + S +ATG+G+ +A P+LR E E L+
Sbjct: 192 NPLWNSMIVGGFKDDQSFLGYVDLLGTTYSASTIATGYGSMIAIPLLRKAVEGRETTLTE 251
Query: 180 EDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
E+G LL +CM+VL YRD ++NK QIA +T +G IS+ +T W F
Sbjct: 252 EEGKALLVECMKVLFYRDARSLNKFQIATVTSQGVNISESIVAETEWSF 300
>gi|308321153|gb|ADO27730.1| proteasome subunit beta type-4 [Ictalurus furcatus]
Length = 258
Score = 199 bits (505), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 151/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P++ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + ++LGASG+
Sbjct: 36 PVRHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDATILGASGD 95
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q + + ++++++ + + DG+S PK +HS+LTRVMYNRR++ +PLWN++V+GG
Sbjct: 96 YADYQYIKQVIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSRMNPLWNTVVIGGFY 155
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E VATGFG +LA+P++R+ E +S ++ L+E+C++VL
Sbjct: 156 NGESFLGYVDKLGVAYEAPAVATGFGAYLAQPLMREVLENKVEVSKDEARALIERCLKVL 215
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +T+EG I P + +T W
Sbjct: 216 YYRDARSYNRHEIAIVTQEGVEILGPLSSETNW 248
>gi|66822433|ref|XP_644571.1| proteasome subunit beta type 4 [Dictyostelium discoideum AX4]
gi|66822651|ref|XP_644680.1| proteasome subunit beta type 4 [Dictyostelium discoideum AX4]
gi|122057658|sp|Q556Q0.1|PSB4_DICDI RecName: Full=Proteasome subunit beta type-4
gi|60472694|gb|EAL70645.1| proteasome subunit beta type 4 [Dictyostelium discoideum AX4]
gi|60472850|gb|EAL70799.1| proteasome subunit beta type 4 [Dictyostelium discoideum AX4]
Length = 259
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 143/210 (68%), Gaps = 2/210 (0%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
Q+T P VTGTSV+A+KY G++M +DM SYGS R+ S ER+K G ++++GASGE S
Sbjct: 35 QKTLDPIVTGTSVIAIKYDKGVVMGSDMLLSYGSLARFNSTERMKKFGGYTIVGASGEYS 94
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ + L++L+ D+ DDG+ L +E+ +YL RV+YN+RN+ +PLWN+LV+ G + G
Sbjct: 95 DFQSITNTLNDLVTDDHCMDDGSKLSSEEIWNYLARVLYNQRNRGNPLWNTLVVMGYQGG 154
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE--NLSYEDGVKLLEKCMRVLLY 195
+ +LG V ++G ++D + TG+G+H+A P+LR E N++ E +L++ C+RVL Y
Sbjct: 155 KSFLGKVDLVGTCYKDDIITTGYGSHIALPLLRKARDENPNMNLEQAKQLIQDCLRVLFY 214
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTF 225
RD + K+QI+ EEG IS P L TF
Sbjct: 215 RDARSSKKIQISVAGEEGIEISGPIELDTF 244
>gi|260820385|ref|XP_002605515.1| hypothetical protein BRAFLDRAFT_286692 [Branchiostoma floridae]
gi|229290849|gb|EEN61525.1| hypothetical protein BRAFLDRAFT_286692 [Branchiostoma floridae]
Length = 258
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 140/213 (65%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P + T P GTSV+ +K+ G+++AADM GSYGS RY+++ R+ + ++L +G+
Sbjct: 36 PTKHTLHPMTMGTSVLGVKFDGGVVVAADMLGSYGSLARYRNISRVMKVNNTTVLAGAGD 95
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L LD+ I+ D + DG+S PK + S+LTRVMYNRR +F+PLWN +V+GG
Sbjct: 96 YADYQFLKEVLDQKIIDDELLGDGHSFSPKAIFSWLTRVMYNRRTRFNPLWNQVVIGGFN 155
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V IGV +E +ATG G ++A+P+LRD E N+S + ++LLE+C++VL
Sbjct: 156 NGEPFLGYVDKIGVAYEAPTIATGMGAYMAQPLLRDALEKKPNMSQSEALELLERCLKVL 215
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + NK + A +T G I QP + + W
Sbjct: 216 FYRDARSFNKFEFAIVTAAGVEILQPRSAEANW 248
>gi|198431191|ref|XP_002124862.1| PREDICTED: similar to proteasome beta 4 subunit [Ciona
intestinalis]
Length = 258
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 151/220 (68%), Gaps = 3/220 (1%)
Query: 10 LVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSL 69
+ P+D RT P VTGTSV+ LK+ G+++AAD GSYGS R+++V R+ + ++
Sbjct: 29 VASPSDARNRTSQPTVTGTSVLGLKFTGGVIIAADTLGSYGSMARFRNVSRVMKVNDSTI 88
Query: 70 LGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
L A+G+ +DFQ + ++++++ + + +DG + P +HS++TR++Y+RR+KFDPLWNS+
Sbjct: 89 LSAAGDYADFQFIKAEIEQMVIDEEVLNDGFFMSPGAVHSWMTRMLYHRRSKFDPLWNSV 148
Query: 130 VLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLL 186
+ G NG+ +LG V IG+ F+ + VA+GFG +LA+P++R ++ +NLSYE ++
Sbjct: 149 TVAGFYNGESFLGSVDKIGIAFKSASVASGFGAYLAQPLMRKAIEDNGDNLSYEKARHVI 208
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
E+C++VL YRD + N+ +IA +T++G I +P + K W
Sbjct: 209 EECLKVLYYRDARSYNRYEIAVVTKDGVKIEKPSSSKPDW 248
>gi|340371863|ref|XP_003384464.1| PREDICTED: proteasome subunit beta type-4-like [Amphimedon
queenslandica]
Length = 248
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 145/215 (67%), Gaps = 2/215 (0%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N I RT P VTG+SV+ + + DG+++AAD GSYGS RY+ + R+ + ++ S
Sbjct: 24 NMAIGRTLRPIVTGSSVLGITFSDGVMLAADTLGSYGSLARYRDLSRLLKVNDTTVAAGS 83
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
G+ +DFQ + R + L + + + DG+S P+ +S+LTRVMYNRR K +PLWN++++GG
Sbjct: 84 GDYADFQYIARLFESLNIESDSYCDGHSYTPRSFYSWLTRVMYNRRTKINPLWNTVIMGG 143
Query: 134 VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMR 191
+ + +LG+V+ +GV+FE +ATGFG ++A+P++RD + +N +S E+ KLLEKCM
Sbjct: 144 YHDNKPFLGVVNSLGVSFEAPTLATGFGGYIAQPLMRDAYEKNPSMSKEEAQKLLEKCMT 203
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
VL YRD + NK +IA IT +G TI+ P L+ W
Sbjct: 204 VLYYRDARSWNKYEIATITTDGVTITGPMKLEGNW 238
>gi|403178659|ref|XP_003337064.2| 20S proteasome subunit beta 7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164256|gb|EFP92645.2| 20S proteasome subunit beta 7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 272
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 144/222 (64%), Gaps = 8/222 (3%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
D +Q TQ P VTGTSV+ +KYK G+++AADM SYGS R+K + R+ P+G+H+++GA G
Sbjct: 39 DGVQHTQQPIVTGTSVLGIKYKGGVMLAADMLASYGSLARFKDIRRLVPVGEHTVIGAGG 98
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
++SDFQ + + L+ + + + DDG+ L ++ YL R+MYNRR K +PLWNS V+GG+
Sbjct: 99 DLSDFQYIQKVLEARMTEEVLADDGHILKTPQIFEYLARIMYNRRTKGNPLWNSFVVGGI 158
Query: 135 KNGQK--YLGMVSMIGVNFEDSHVATGFGNHLARPILRD------EWHENLSYEDGVKLL 186
+ +L V +IG + +ATG+G+++A+P+LR H +L+ E K L
Sbjct: 159 DKASQEGFLSYVDLIGTTYSAPSIATGYGSYIAQPLLRKVLDDLPNGHLDLTPELARKTL 218
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
E+ M+VL YRD ++NK QIA IT +G IS+P T W F
Sbjct: 219 EESMKVLFYRDARSLNKFQIANITVDGVEISEPIQAPTEWAF 260
>gi|209732122|gb|ACI66930.1| Proteasome subunit beta type-4 precursor [Salmo salar]
Length = 256
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/213 (42%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI+ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + ++LGASG+
Sbjct: 34 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDTTILGASGD 93
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q + + ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 94 YADYQYMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVVGGFY 153
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E VATGFG +LA+P +R+ E ++ ++ L+++C++VL
Sbjct: 154 NGESFLGYVDKLGVAYEAPTVATGFGAYLAQPPMREVVENKVEITKDEARALIDRCLKVL 213
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TEEG I P + +T W
Sbjct: 214 YYRDARSYNRHEIAIVTEEGVEIVGPLSCETNW 246
>gi|209737634|gb|ACI69686.1| Proteasome subunit beta type-4 precursor [Salmo salar]
Length = 256
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI+ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + ++LGASG+
Sbjct: 34 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDTTILGASGD 93
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q + + ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 94 YADYQYMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVVGGFY 153
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E VA GFG +LA+P++R+ E ++ ++ L+++C++VL
Sbjct: 154 NGESFLGYVDKLGVAYEAPTVAAGFGAYLAQPLMREVVENKVEITKDEARALIDRCLKVL 213
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TEEG I P + +T W
Sbjct: 214 YYRDARSYNRHEIAIVTEEGVEIVGPLSCETNW 246
>gi|328865242|gb|EGG13628.1| proteasome subunit beta type 4 [Dictyostelium fasciculatum]
Length = 289
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 141/207 (68%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
+RT P VTGTSV+A+KY G++M AD SYGS R+ ++ER+K GK +++GA GE S
Sbjct: 43 KRTVDPIVTGTSVIAIKYNGGVVMGADTLLSYGSLARFNNIERMKKFGKSTIIGAGGEYS 102
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ L + LD+L++ D DDG +L E+ +Y+ RVMYNRRNK DP WNSLV+ G N
Sbjct: 103 DFQNLSQVLDDLVVDDGCTDDGTTLSTTEIWNYIARVMYNRRNKGDPYWNSLVVIGHDNN 162
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+ +LG V ++G ++D+ +A+G+G+H+A P+LR + E+++ ++ L++ C+RVL YRD
Sbjct: 163 KSFLGKVDLVGTCYQDNFIASGYGSHIALPLLRKAYKEDMTLDEAKTLIQDCLRVLFYRD 222
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKT 224
+ +Q++ +G I++ AL T
Sbjct: 223 ARSSRFIQLSIANADGLVITEQIALDT 249
>gi|346473253|gb|AEO36471.1| hypothetical protein [Amblyomma maculatum]
Length = 254
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 92/212 (43%), Positives = 141/212 (66%), Gaps = 3/212 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRTQ P VT TSV+A K+ G+++AAD GSYG+ R+++ RI + ASG+ +
Sbjct: 33 QRTQSPMVTATSVLATKFDGGVMLAADTLGSYGTLARFRNCTRILKVNDQIAAAASGDYA 92
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
D+Q L +D+ I+ + +DG L PK L+S+LTRVMYNRR++FDPLWN+ ++GG+++G
Sbjct: 93 DYQFLKSVIDQKIISEECLNDGFKLKPKSLYSWLTRVMYNRRSRFDPLWNTYLIGGLQDG 152
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE---NLSYEDGVKLLEKCMRVLL 194
+LG V M+G FE+ +ATG+G ++A+P+LRDE+ + L+ E+ LL C+RVL
Sbjct: 153 VPFLGQVDMLGTAFENDTLATGYGAYIAQPLLRDEYEKKAGQLTAEEARNLLSTCLRVLY 212
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + +K Q+A +T +G I P + + W
Sbjct: 213 YRDARSFDKYQLATVTAKGVVIEGPLKVDSNW 244
>gi|209730414|gb|ACI66076.1| Proteasome subunit beta type-4 precursor [Salmo salar]
Length = 256
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI+ T P VTGTSV+ +K+ G+++AADM G YGS R++++ R+ + ++LGASG+
Sbjct: 34 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGFYGSLARFRNISRLMKVNDTTILGASGD 93
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q + + ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 94 YADYQYMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVVGGFY 153
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E VATGFG +LA+P++R+ E ++ ++ L+++C++VL
Sbjct: 154 NGESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIDRCLKVL 213
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +TEEG I P + +T W
Sbjct: 214 YYRDARSYNRHEIAIVTEEGVEIVGPLSCETNW 246
>gi|185135483|ref|NP_001117779.1| proteasome subunit N3 [Oncorhynchus mykiss]
gi|13991680|gb|AAK51461.1|AF361366_1 proteasome subunit N3 [Oncorhynchus mykiss]
Length = 256
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI+ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + ++LGASG+
Sbjct: 34 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDSTILGASGD 93
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q + + ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 94 YADYQYMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFY 153
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
N + +LG V +GV +E VATGFG +LA+P++R+ E ++ ++ L+E+C++VL
Sbjct: 154 NDESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIERCLKVL 213
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +T+EG I P + +T W
Sbjct: 214 YYRDARSYNRHEIAIVTKEGVEIVGPMSCETNW 246
>gi|225704026|gb|ACO07859.1| Proteasome subunit beta type 4 precursor [Oncorhynchus mykiss]
Length = 256
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI+ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + ++LGASG+
Sbjct: 34 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDSTILGASGD 93
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q + + ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 94 YADYQYMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFY 153
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
N + +LG V +GV +E VATGFG +LA+P++R+ E ++ ++ L+E+C++VL
Sbjct: 154 NDESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIERCLKVL 213
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +T+EG I P + +T W
Sbjct: 214 YYRDARSYNRHEIAIVTKEGVEIVGPMSCETNW 246
>gi|209733162|gb|ACI67450.1| Proteasome subunit beta type-4 precursor [Salmo salar]
Length = 256
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 150/213 (70%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI+ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + ++LGASG+
Sbjct: 34 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDSTILGASGD 93
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q + + ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 94 YADYQYMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFY 153
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
N + +LG V +GV +E VATGFG +LA+P++R+ E ++ ++ L+E+C++VL
Sbjct: 154 NDESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIERCLKVL 213
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +T+EG I P + +T W
Sbjct: 214 YYRDARSYNRHEIAIVTKEGVEIVGPMSCETNW 246
>gi|294880655|ref|XP_002769093.1| 20S proteasome subunit beta 7, putative [Perkinsus marinus ATCC
50983]
gi|294949219|ref|XP_002786102.1| 20S proteasome subunit beta 7, putative [Perkinsus marinus ATCC
50983]
gi|239872228|gb|EER01811.1| 20S proteasome subunit beta 7, putative [Perkinsus marinus ATCC
50983]
gi|239900230|gb|EER17898.1| 20S proteasome subunit beta 7, putative [Perkinsus marinus ATCC
50983]
Length = 238
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 139/223 (62%), Gaps = 5/223 (2%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT PYVTG SV+A+KYKDGI+M D SYGS+ R+ V+R+ +G ++L+ ASGEIS
Sbjct: 5 QRTLQPYVTGASVLAVKYKDGIMMCYDTLASYGSSARFTGVDRVIKVGSNTLVAASGEIS 64
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KN 136
DFQ L NL +L D + DDG GP E Y++R+ Y +R K DPL+N++V+GG+ K
Sbjct: 65 DFQYLSDNLQDLENQDWLCDDGTERGPSEWAQYISRIYYQKRGKMDPLYNNVVIGGINKK 124
Query: 137 GQK----YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRV 192
G YL V + G F++ VATGFG HLA PI+R + ++S + ++LE+CM V
Sbjct: 125 GSSEEPYYLATVDLYGTFFQEDIVATGFGQHLAIPIMRRKHRNDMSEAEAREMLEECMNV 184
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPT 235
L YRD NK++ A IT EG IS L W + + PT
Sbjct: 185 LYYRDCYCSNKVKFATITAEGYKISNEVVLSGKWDYQRWITPT 227
>gi|62955575|ref|NP_001017801.1| proteasome subunit beta type-4 [Danio rerio]
gi|62202262|gb|AAH92880.1| Proteasome (prosome, macropain) subunit, beta type, 4 [Danio rerio]
gi|182888862|gb|AAI64311.1| Psmb4 protein [Danio rerio]
Length = 215
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 148/204 (72%), Gaps = 2/204 (0%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
VTGTSV+ +K+K G+++AADM GSYGS R++++ R+ + ++LGASG+ +D+Q L +
Sbjct: 2 VTGTSVLGVKFKGGVIIAADMLGSYGSLARFRNISRLMKVNNSTILGASGDYADYQYLKQ 61
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG NG+ +LG V
Sbjct: 62 IIEQMVIDEELLGDGHSYTPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGESFLGYV 121
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+GV +E VATGFG +LA+P++R+ E E ++ E+ +L+E+C++VL YRD + N
Sbjct: 122 DKLGVAYEAPTVATGFGAYLAQPLMREVIENKEEITKEEARELIERCLKVLYYRDARSYN 181
Query: 203 KLQIAKITEEGTTISQPYALKTFW 226
+ +IA +T +G I P + +T W
Sbjct: 182 RHEIAIVTADGVEIIGPLSSETNW 205
>gi|197129689|gb|ACH46187.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
Length = 270
Score = 197 bits (500), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 142/203 (69%), Gaps = 4/203 (1%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P RT P VTGTSV+ LK+ G+++AAD GSYGS R++ + R+ + ++LGASG+
Sbjct: 47 PAGRTLSPMVTGTSVLGLKFSGGVMLAADTVGSYGSLARFRGISRLLKVNDSTVLGASGD 106
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
++DFQ L + L+++++ + + DG+S P+ LHS+LTRV+YNRR+K +PLWN++++ GV
Sbjct: 107 LADFQHLRQLLEQMVIDEELLGDGHSYSPRALHSWLTRVLYNRRSKINPLWNTVLIAGVY 166
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENL----SYEDGVKLLEKCMR 191
G+ +LG V M+GV +E +ATGFG +LA+P+LR E + + E+ +LLE+C+R
Sbjct: 167 GGESFLGYVDMLGVAYEAPSLATGFGAYLAQPLLRAELERDQDRLPTREEARELLERCLR 226
Query: 192 VLLYRDRSAVNKLQIAKITEEGT 214
VL YRD + N+ ++A +TE G
Sbjct: 227 VLYYRDARSFNRYEVATVTEXGC 249
>gi|167535742|ref|XP_001749544.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771936|gb|EDQ85595.1| predicted protein [Monosiga brevicollis MX1]
Length = 224
Score = 196 bits (499), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 86/207 (41%), Positives = 142/207 (68%), Gaps = 3/207 (1%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P VTGTSV+A+K+ G+++AAD GSYGS R++ + R+ +G +++GASG+++DF +
Sbjct: 8 PIVTGTSVLAIKFDGGVVIAADTLGSYGSLARFRDIRRLVSVGNQTVVGASGDVADFHSM 67
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
LDEL + + +DD +++ PK + S+LTRV+YNRR++ +PLWNS V+ GV++G+ +LG
Sbjct: 68 KDTLDELEVENREYDDEHTIKPKAIFSFLTRVLYNRRSRMNPLWNSFVVAGVQDGEPFLG 127
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN---LSYEDGVKLLEKCMRVLLYRDRS 199
+GV F + +ATG+G ++A P+LR+ N L+ + V +EKC +VL YRD
Sbjct: 128 TTDKVGVAFTEDTIATGYGAYIALPLLRNALESNDGPLTRDQAVAEIEKCCKVLFYRDAR 187
Query: 200 AVNKLQIAKITEEGTTISQPYALKTFW 226
++N+ ++A IT G + +P A++T W
Sbjct: 188 SLNRYEVAVITAAGVEMFEPKAMETDW 214
>gi|332020294|gb|EGI60725.1| Proteasome subunit beta type-4 [Acromyrmex echinatior]
Length = 252
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 91/214 (42%), Positives = 145/214 (67%), Gaps = 3/214 (1%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
Q++Q P TGTSV+ +++ DG++++AD+ GSYGS RY+++ER+ + + +LGASG+
Sbjct: 35 FQKSQSPITTGTSVIGIQFNDGVVISADILGSYGSLARYRNLERLMKVNDNIILGASGDY 94
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+DFQ + +++ IL + DDG SL PK LH +LTRVMYNRR+ FDP WN+ V+ G+++
Sbjct: 95 ADFQCIKSYVEKKILEEQCLDDGFSLKPKALHCWLTRVMYNRRSNFDPFWNNFVIAGLED 154
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMRVLL 194
GQ +L V +G ++D +ATG+G ++A PILR + EN +S ED ++L+ K +VL
Sbjct: 155 GQPFLATVDKLGTAYKDPVIATGYGAYMATPILRKAYEENSQMSKEDAIQLIYKVNQVLF 214
Query: 195 YRDRSAVNKLQIAKIT-EEGTTISQPYALKTFWG 227
YRD + K + +T E+G I P ++++WG
Sbjct: 215 YRDARSFPKYHLGIVTKEKGVEIQGPIDVESYWG 248
>gi|295314965|gb|ADF97632.1| proteasome subunit beta type-4 [Hypophthalmichthys molitrix]
Length = 257
Score = 196 bits (498), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 149/213 (69%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI+ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + ++LGASG+
Sbjct: 35 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNNTTILGASGD 94
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q L + ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 95 YADYQYLKQIIEQMVIDEELLGDGHSYTPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFY 154
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMRVL 193
NG+ +LG V +GV +E VATGFG +LA+P++R+ ++ ++ L+E+C++VL
Sbjct: 155 NGESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVLDNKVEITKDEARALIERCLKVL 214
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +T +G I P + +T W
Sbjct: 215 YYRDARSYNRHEIAIVTADGVEIIGPLSSETNW 247
>gi|330793877|ref|XP_003285008.1| hypothetical protein DICPUDRAFT_75973 [Dictyostelium purpureum]
gi|325085035|gb|EGC38450.1| hypothetical protein DICPUDRAFT_75973 [Dictyostelium purpureum]
Length = 263
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 140/205 (68%), Gaps = 2/205 (0%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P VTGTS++A+KY G++M +DM SYGS R+ S++R+ G ++++GASGE SDFQ +
Sbjct: 44 PIVTGTSIIAIKYDKGVVMGSDMLLSYGSLARFNSIQRMTKFGGNTIIGASGEYSDFQSI 103
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
L+EL+ D+ DDG+ L P+E+ +YL R++YN+RNK +PLWN+ V+ G + G+ +LG
Sbjct: 104 TTTLNELVTDDHCMDDGSRLSPEEIWNYLARILYNQRNKGNPLWNTCVVIGYQGGKSFLG 163
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHE--NLSYEDGVKLLEKCMRVLLYRDRSA 200
V ++G F++ V G+G+H+A P+LR + N++ E KL+E C+RVL YRD +
Sbjct: 164 KVDLVGTCFKEDIVTCGYGSHIALPLLRKARDDNPNMNLEQAKKLIEDCLRVLFYRDARS 223
Query: 201 VNKLQIAKITEEGTTISQPYALKTF 225
K+QIA E+G IS P L+T+
Sbjct: 224 SKKIQIAVAGEQGIDISGPIELETY 248
>gi|281211377|gb|EFA85542.1| proteasome subunit beta type 4 [Polysphondylium pallidum PN500]
Length = 258
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 91/215 (42%), Positives = 140/215 (65%), Gaps = 2/215 (0%)
Query: 13 PNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGA 72
P++ QRT P VTG+SV+A+KY G++M D SYGS R+ +++R+K G +++G
Sbjct: 29 PSEEKQRTTDPIVTGSSVIAIKYNGGVVMGCDTLCSYGSLARFNNIQRVKQFGPKTIVGY 88
Query: 73 SGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
SGE SDFQ + + LD+L++ D DD + L +E+ +YL RV+YNRRNK DPLWN+LV+
Sbjct: 89 SGEHSDFQSITQLLDDLVIDDQCIDDKSQLSTEEIWNYLARVLYNRRNKVDPLWNNLVVM 148
Query: 133 GV--KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCM 190
G K + +LG V + G F+D ++ATG+G H+A P+LR + +++ E KL+ C+
Sbjct: 149 GFDKKTDKSFLGKVDLYGTCFKDDYIATGYGQHIALPLLRKAYSPDMTLEQAQKLITDCL 208
Query: 191 RVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTF 225
RVL YRD + ++Q++ G IS P L+T+
Sbjct: 209 RVLFYRDARSSKRVQLSYANANGMEISAPIELETY 243
>gi|397629176|gb|EJK69237.1| hypothetical protein THAOC_09516 [Thalassiosira oceanica]
Length = 268
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/240 (41%), Positives = 151/240 (62%), Gaps = 15/240 (6%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
+RT P TGTSV+ +KY++G+++AAD SYGS +YK+ +R+ I +L+G SGE S
Sbjct: 29 ERTTRPITTGTSVLGIKYRNGVMLAADTLVSYGSLAKYKNAKRLLSINSRTLVGGSGEYS 88
Query: 78 DFQ---ELLRN--LDELILYDNMWD-DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
D Q +LLR L + D++++ D N KE+ SYL VMY RRNK +PLWN +V+
Sbjct: 89 DLQSISDLLRANALADRCTADSLYEEDNNEECAKEVWSYLRAVMYQRRNKMNPLWNDVVV 148
Query: 132 GG-------VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVK 184
G + + +LG+V IG +ED +ATGFG ++A P++R+++ ++ +
Sbjct: 149 AGFSQNPDGTTSDKPFLGIVDKIGTAYEDDILATGFGGYIALPLMREKYRPDMEEGEARA 208
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTA--GAEGSW 242
LLE C+R+L YRD A+N++QIAK+TE+G +S PY L T+W F +Q+ G +G W
Sbjct: 209 LLEDCLRILFYRDCRALNRVQIAKVTEDGVLVSDPYELDTYWDFKGYQSNKGEMGTDGGW 268
>gi|225704572|gb|ACO08132.1| Proteasome subunit beta type 4 precursor [Oncorhynchus mykiss]
Length = 256
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 148/213 (69%), Gaps = 2/213 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI+ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + ++LGASG+
Sbjct: 34 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDSTILGASGD 93
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q + + ++++++ + + DG+S PK +HS+LTRVMYNRR+K +PLWN++V+GG
Sbjct: 94 YADYQYMKQIIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFY 153
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
N + +L V +GV +E VATGFG +LA+P++R+ E ++ ++ L+E C++VL
Sbjct: 154 NDESFLDYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIEHCLKVL 213
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +T+EG I P + +T W
Sbjct: 214 YYRDARSYNRHEIAIVTKEGVEIVGPMSCETNW 246
>gi|19112100|ref|NP_595308.1| 20S proteasome component beta 7 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|17380267|sp|Q9USQ9.1|PSB7_SCHPO RecName: Full=Probable proteasome subunit beta type-7
gi|5830510|emb|CAB54818.1| 20S proteasome component beta 7 (predicted) [Schizosaccharomyces
pombe]
Length = 262
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 94/224 (41%), Positives = 140/224 (62%), Gaps = 8/224 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PIQRT P VTG+SV+ALK+ DG+++AAD SYGS R+ VER+ +G ++++GA G+
Sbjct: 32 PIQRTVQPIVTGSSVLALKFADGVMIAADNLASYGSLARFYDVERLTKVGDNTIVGAGGD 91
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV- 134
ISD+Q++ R L++L + + + DG +L P +H YL++V+Y RRNK DP WN L++ GV
Sbjct: 92 ISDYQQIQRLLEKLEIKEGNYGDGYALQPSYIHEYLSKVLYARRNKLDPYWNQLIVAGVD 151
Query: 135 -KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEK 188
+N + Y+ + G + +ATGF HLA P+LR D W + LS E +++
Sbjct: 152 GENKEPYVAFADLRGTTYSAPAIATGFAMHLALPMLRKATDDDRW-KTLSKESARATIDE 210
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQ 232
CMRVL YRD ++NK +A IT EG ++ + W F Q
Sbjct: 211 CMRVLFYRDARSLNKFSVATITPEGIEFQTDQSVSSKWAFAEKQ 254
>gi|321263655|ref|XP_003196545.1| proteasome subunit beta type 4 [Cryptococcus gattii WM276]
gi|317463022|gb|ADV24758.1| Proteasome subunit beta type 4, putative [Cryptococcus gattii
WM276]
Length = 280
Score = 192 bits (488), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/227 (40%), Positives = 146/227 (64%), Gaps = 14/227 (6%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ TQ P VTGTSV+ +K+ G+++AAD GSYGS R++ ++R+ P+GKH+LLG +G+
Sbjct: 42 PVSHTQQPLVTGTSVLGIKFDKGVMIAADNLGSYGSLARFRDIQRLHPLGKHTLLGVAGD 101
Query: 76 ISDFQELLRNLDELILYDN---MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
+SD+Q L R LD L+ ++ + D SL P +++ L+ + Y RR+K DP+WN++++G
Sbjct: 102 MSDYQWLKRELDGLLREEDALSLTDSHPSLSPSNIYTLLSNLFYARRSKVDPIWNAILVG 161
Query: 133 GVKNGQK--YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN---------LSYED 181
G + +K +L V ++G + +ATGFG HLA+P+LR+ + L+ E+
Sbjct: 162 GWDDTKKESFLAYVDLLGTTYSAPTLATGFGAHLAQPLLRETYEAKAGIDGTGPLLTQEE 221
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
KL++ CM+VL YRD ++NK Q+A ITEEG IS + T W F
Sbjct: 222 AEKLIDDCMKVLFYRDARSINKYQVATITEEGVKISDSKSAPTEWKF 268
>gi|380036049|ref|NP_001244036.1| proteasome subunit beta type-4 [Ictalurus punctatus]
gi|308323675|gb|ADO28973.1| proteasome subunit beta type-4 [Ictalurus punctatus]
Length = 215
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 87/204 (42%), Positives = 146/204 (71%), Gaps = 2/204 (0%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + ++LGASG+ +D+Q + +
Sbjct: 2 VTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDATILGASGDYADYQYIKQ 61
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
++++++ + + DG+S PK +HS+LTRVMYNRR++ +PLWN++V+GG NG+ +LG V
Sbjct: 62 VIEQMVIDEELLGDGHSYSPKAIHSWLTRVMYNRRSRMNPLWNTVVIGGFYNGESFLGYV 121
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+GV +E VATGFG +LA+P++R+ E +S ++ L+E+C++VL YRD + N
Sbjct: 122 DKLGVAYEAPAVATGFGAYLAQPLMREVLENKVEVSKDEARALIERCLKVLYYRDARSYN 181
Query: 203 KLQIAKITEEGTTISQPYALKTFW 226
+ +IA +T+EG I P + +T W
Sbjct: 182 RHEIAIVTQEGVEILGPLSSETNW 205
>gi|427787451|gb|JAA59177.1| Putative 20s proteasome regulatory subunit beta type psmb4/pre4
[Rhipicephalus pulchellus]
Length = 254
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 140/212 (66%), Gaps = 3/212 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRTQ P T TSV+A K+ G+++AAD+ GSYGS R+++ RI + + ASG+ +
Sbjct: 33 QRTQNPMTTATSVLATKFDGGVMLAADILGSYGSLARFRNCPRILKVNDQIVAAASGDYA 92
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
D+Q L +D+ ++ + +DG L PK L+S+LTR+MYNRR++FDPLWN+ ++GG+++G
Sbjct: 93 DYQYLKSVIDQKMISEECLNDGFRLKPKSLYSWLTRIMYNRRSRFDPLWNTYLIGGLQDG 152
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE---NLSYEDGVKLLEKCMRVLL 194
+LG V M+G FE +ATG+G ++A+P+LRD + + L+ ++ +L C+RVL
Sbjct: 153 VPFLGQVDMLGTAFESETLATGYGAYIAQPLLRDAYEKKAGQLTKKEAQDVLTYCLRVLY 212
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + +K Q+A +T EG I P + + W
Sbjct: 213 YRDARSFDKYQVATVTSEGVVIEGPLKVTSNW 244
>gi|126697448|gb|ABO26681.1| proteasome subunit N3 [Haliotis discus discus]
Length = 253
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 144/211 (68%), Gaps = 2/211 (0%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT P VTGTSV+ +K+ GI +AADM GSYGS R++ + R+ + + ++LG G+ +
Sbjct: 37 QRTMYPIVTGTSVLGIKFNGGIAIAADMLGSYGSMARFRDISRVLKVNETTVLGGGGDYA 96
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ + +++ ++ + +DG S P+ L S+LTRV+YNRR+ F+PLWN V+GG+
Sbjct: 97 DFQFIRSIINQRVIDEECLNDGFSYTPRSLFSWLTRVLYNRRSNFNPLWNVFVVGGMDKD 156
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLY 195
+ +LG V IGV +E + +ATG+G ++A+PI+R+ E ++S E+ +LL++C+R+L Y
Sbjct: 157 EPFLGYVDKIGVAYESTTIATGYGAYIAQPIMREALEKKPDISQEEAEQLLDRCLRLLYY 216
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
RD ++NK Q+A +T++G +I P +T W
Sbjct: 217 RDARSLNKYQVAIVTKDGASIKGPIVSQTNW 247
>gi|405123387|gb|AFR98152.1| endopeptidase [Cryptococcus neoformans var. grubii H99]
Length = 280
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 146/227 (64%), Gaps = 14/227 (6%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ TQ P VTGTSV+ +K+ G+++AAD GSYGS R++ ++R+ P+GKH+LLG +G+
Sbjct: 42 PVSHTQQPLVTGTSVLGIKFDKGVMIAADNLGSYGSLARFRDIQRLHPLGKHTLLGVAGD 101
Query: 76 ISDFQELLRNLDELILYD---NMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
+SD+Q L + LD L+ + ++ D SL P +++ L+ + Y RR+K DP+WN++++G
Sbjct: 102 MSDYQWLKKELDGLLREEAALSLTDSHPSLSPSNIYTLLSNLFYARRSKVDPIWNAVLVG 161
Query: 133 GVKNGQK--YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN---------LSYED 181
G + +K +L V ++G + +ATGFG HLA+P+LR+ + L+ E+
Sbjct: 162 GWDDAKKESFLAYVDLLGTTYSAPTLATGFGAHLAQPLLREAYEAKAGIDGKGPLLTQEE 221
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
KL++ CM+VL YRD ++NK Q+A ITEEG IS + T W F
Sbjct: 222 AEKLIDDCMKVLFYRDARSINKYQVATITEEGVKISDSRSAPTEWKF 268
>gi|242005373|ref|XP_002423543.1| proteasome subunit beta type 4 precursor, putative [Pediculus
humanus corporis]
gi|212506672|gb|EEB10805.1| proteasome subunit beta type 4 precursor, putative [Pediculus
humanus corporis]
Length = 265
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/233 (39%), Positives = 149/233 (63%), Gaps = 6/233 (2%)
Query: 3 SIQAKQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIK 62
++Q +Q G N+ QR++ P TG+SV+ +K+ +G+++AAD GSYG+ R++ R+
Sbjct: 30 TMQPQQSY-GSNNGFQRSKEPITTGSSVLGIKFNNGVVIAADTLGSYGTLARFRDCSRVY 88
Query: 63 PIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF 122
+ K+ ++GA G+ +DFQ L +++ I+ + DDG + PK L+ +LTRV+Y RR +
Sbjct: 89 KVNKNIIIGAGGDYADFQYLKEVINQKIIDEECVDDGFYMKPKALYHWLTRVLYTRRTQL 148
Query: 123 DPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN-----L 177
DPLW++ V+GG+++G+ +LG V +G F D HVATGFG++LA PI+RDE + L
Sbjct: 149 DPLWSNYVIGGIQDGEPFLGTVDKLGTAFLDDHVATGFGSYLAIPIMRDELEKRKQDGGL 208
Query: 178 SYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTA 230
+ E+ V L+ KC+ VL YRD + K QI IT ++ P+A++ W A
Sbjct: 209 TEEEAVNLIYKCVEVLYYRDAKSWPKFQIGIITPNNVSVEGPFAIEGSWDVAA 261
>gi|444515076|gb|ELV10738.1| Proteasome subunit beta type-4 [Tupaia chinensis]
Length = 202
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 88/190 (46%), Positives = 138/190 (72%), Gaps = 2/190 (1%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 11 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 70
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 71 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 130
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
+G+ +LG V M+GV +E +ATG+G +LA+P+LR+ E LS + +L+E+CMRVL
Sbjct: 131 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPLLREVLEKQPVLSQTEARELVERCMRVL 190
Query: 194 LYRDRSAVNK 203
YRD + N+
Sbjct: 191 YYRDARSYNR 200
>gi|58260960|ref|XP_567890.1| endopeptidase [Cryptococcus neoformans var. neoformans JEC21]
gi|134116905|ref|XP_772679.1| hypothetical protein CNBK0530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255297|gb|EAL18032.1| hypothetical protein CNBK0530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229971|gb|AAW46373.1| endopeptidase, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 280
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 92/227 (40%), Positives = 146/227 (64%), Gaps = 14/227 (6%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ TQ P VTGTSV+ +K+ G+++AAD GSYGS R++ ++R+ P+GKH+LLG +G+
Sbjct: 42 PMSHTQQPLVTGTSVLGIKFDKGVMIAADNLGSYGSLARFRDIQRLHPLGKHTLLGVAGD 101
Query: 76 ISDFQELLRNLDELILYD---NMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
+SD+Q L R LD L+ + ++ D SL P +++ L+ + Y RR+K DP+WN++++G
Sbjct: 102 MSDYQWLKRELDGLLREESALSLTDSHPSLSPSNIYTLLSNLFYARRSKVDPIWNAVLVG 161
Query: 133 GVKNGQK--YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN---------LSYED 181
G + +K +L V ++G + +ATGFG HLA+P+LR+ + L+ E+
Sbjct: 162 GWDDTKKESFLAYVDLLGTTYSAPTLATGFGAHLAQPLLREAYEAKAGIDGKGPLLTQEE 221
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
KL++ CM+VL YRD ++NK Q+A IT+EG IS + T W F
Sbjct: 222 AEKLIDDCMKVLFYRDARSINKYQVATITDEGVKISDSRSAPTEWKF 268
>gi|221128953|ref|XP_002160944.1| PREDICTED: proteasome subunit beta type-4-like [Hydra
magnipapillata]
Length = 259
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 146/215 (67%), Gaps = 2/215 (0%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
+D ++T P VTGTSV+A+++ G+ +AADM GSYGS +Y + R+ + +++ AS
Sbjct: 35 HDARKKTMSPIVTGTSVLAIRFDGGVAIAADMLGSYGSLAKYTRLSRMTEVNPKTVVAAS 94
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
G+ +D+Q++ L+ +++ +++ DDG+ P+ + S+L +MY +R+KF+PLWN+LV+GG
Sbjct: 95 GDYADYQQISEYLERMMIQNDIEDDGHGYTPQSIFSFLRLLMYQKRSKFEPLWNTLVVGG 154
Query: 134 VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMR 191
NG +LG V +GV +ED+ +ATG+G ++ARP++ E + N+S + VKLL C++
Sbjct: 155 YHNGSSFLGYVDKLGVAYEDNTIATGYGAYIARPLMTKALESNPNMSKAEAVKLLIDCLK 214
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
VL YRD + N+ +I+ ITEEG T+ + +T W
Sbjct: 215 VLFYRDARSHNRFEISIITEEGVTMESNMSFETNW 249
>gi|226470558|emb|CAX70559.1| proteasome (prosome macropain) subunit beta type 4 [Schistosoma
japonicum]
Length = 247
Score = 189 bits (480), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 149/242 (61%), Gaps = 11/242 (4%)
Query: 1 MESIQAKQGLVGPN---DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKS 57
M+S+Q + N D T P TGTSV+ +KYKDG+++AAD+ SYGS +Y
Sbjct: 1 MDSLQVEHPTDFANVCGDQKHHTMTPICTGTSVIGIKYKDGVVLAADLLVSYGSLAKYMD 60
Query: 58 VERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYN 117
ER+ + + +++ SG+++DFQ L ++ EL DN+ DG L P LHS++TR++YN
Sbjct: 61 FERMFKVNESTVMCCSGDVADFQFLKHHVKELTHVDNLLSDGFKLSPHALHSWITRILYN 120
Query: 118 RRNKFDPLWNSLVLGGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-- 174
RR++ +PLWN+ ++GG++ NG+ ++G +M+GV+F +++VATGFG +LA PILR+
Sbjct: 121 RRSRLEPLWNTYLVGGIEANGEPFIGYCNMLGVSFSENYVATGFGAYLATPILRECLEIK 180
Query: 175 -----ENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
+N++ ED + + M+ L +RD A + Q+A I +EG I P LK W
Sbjct: 181 AKNDPKNITEEDAISTITCAMKQLYFRDCRAFDTYQMAVINKEGVQIHGPLHLKCDWSIA 240
Query: 230 AF 231
+
Sbjct: 241 EY 242
>gi|422294237|gb|EKU21537.1| 20S proteasome subunit beta 7, partial [Nannochloropsis gaditana
CCMP526]
Length = 247
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 87/179 (48%), Positives = 122/179 (68%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
+RT P VTGTSV+ +KY G+++AAD SYGS R+K V R+ +G +++LGA GE S
Sbjct: 54 KRTHSPMVTGTSVLGVKYNGGVMLAADTLASYGSLARFKDVTRLNAVGDYTILGAGGEFS 113
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ + L+++ D DDG S P EL +YL + Y++RNKF+PLWN +++GG K+G
Sbjct: 114 DFQAIQEILEKMDQEDKNADDGFSHSPAELFNYLRAIFYSKRNKFNPLWNEVLVGGFKDG 173
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+ +LG + MIG F D +ATGFG++LA PI+R WH N++ + LLE CMRVL YR
Sbjct: 174 KAFLGHLDMIGTAFSDEVMATGFGSYLALPIMRKRWHANMTEGEARALLEDCMRVLFYR 232
>gi|226487136|emb|CAX75433.1| proteasome (prosome macropain) subunit beta type 4 [Schistosoma
japonicum]
gi|226487138|emb|CAX75434.1| proteasome (prosome macropain) subunit beta type 4 [Schistosoma
japonicum]
gi|226487140|emb|CAX75435.1| proteasome (prosome macropain) subunit beta type 4 [Schistosoma
japonicum]
Length = 247
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 149/242 (61%), Gaps = 11/242 (4%)
Query: 1 MESIQAKQGLVGPN---DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKS 57
M+S+Q + N D T P TGTSV+ +KYKDG+++AAD+ SYGS +Y
Sbjct: 1 MDSLQVEHPRDFANVCGDQKHHTMTPICTGTSVIGIKYKDGVVLAADLLVSYGSLAKYMD 60
Query: 58 VERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYN 117
ER+ + + +++ SG+++DFQ L ++ EL DN+ DG L P LHS++TR++YN
Sbjct: 61 FERMFKVNESTVMCCSGDVADFQFLKHHVKELTHVDNLLSDGFKLSPHALHSWITRILYN 120
Query: 118 RRNKFDPLWNSLVLGGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-- 174
RR++ +PLWN+ ++GG++ NG+ ++G +M+GV+F +++VATGFG +LA PILR+
Sbjct: 121 RRSRLEPLWNTYLVGGIEANGEPFIGYCNMLGVSFSENYVATGFGAYLATPILRECLEIK 180
Query: 175 -----ENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
+N++ ED + + M+ L +RD A + Q+A I +EG I P LK W
Sbjct: 181 AKNDPKNITEEDAISTITCAMKQLYFRDCRAFDTYQMAVINKEGVQIHGPLHLKCDWSIA 240
Query: 230 AF 231
+
Sbjct: 241 EY 242
>gi|405969077|gb|EKC34087.1| Proteasome subunit beta type-4 [Crassostrea gigas]
Length = 698
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 143/211 (67%), Gaps = 2/211 (0%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
+RT P VTGTSV+ L + G+++AADM GSYG+ RY+++ R+ + + +G SG+ +
Sbjct: 39 KRTLAPTVTGTSVLGLCFDGGVIIAADMLGSYGALARYRNLSRVMKVNDSAAIGISGDYA 98
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
D+Q + +++ ++ + +DG PK L S++TRV+YNRR+ F+PLWN+ ++GGV++G
Sbjct: 99 DYQFMKSVIEQRVIDEECLNDGFQYTPKSLFSWMTRVLYNRRSNFNPLWNTFIVGGVQDG 158
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMRVLLY 195
+ +LG + IGV + D +A+G+G ++A P+LRD + N +S + K +++CM+VL Y
Sbjct: 159 EPFLGYIDKIGVAYNDPTIASGYGAYIAAPLLRDAFEANPKMSLAEAEKKIDECMKVLYY 218
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
RD ++NK ++A +T++GT I P +T W
Sbjct: 219 RDARSLNKYEVAIVTKDGTMIKSPIVSETNW 249
>gi|256081367|ref|XP_002576942.1| proteasome subunit beta 4 (T01 family) [Schistosoma mansoni]
gi|350645402|emb|CCD59931.1| proteasome subunit beta 4 (T01 family) [Schistosoma mansoni]
Length = 247
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 150/242 (61%), Gaps = 11/242 (4%)
Query: 1 MESIQAKQGLVGPN---DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKS 57
M+S+Q K + D Q T P TGTSV+ +KY++G+++AADM SYGS +Y
Sbjct: 1 MDSLQVKFPKSSTDVHGDYKQHTMTPICTGTSVIGIKYRNGVVLAADMLVSYGSLAKYMD 60
Query: 58 VERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYN 117
ER+ + + +++ SG+++DFQ L +++EL D++ DG L P LHS++TRV+YN
Sbjct: 61 FERMFKVNQSTVMCCSGDVADFQFLKHHIEELTHQDSLLSDGFRLSPHALHSWITRVLYN 120
Query: 118 RRNKFDPLWNSLVLGGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-- 174
RR++ PLWN+ ++GG++ NG+ ++G SM+GV+F +++VATGFG +LA PILR+
Sbjct: 121 RRSRLQPLWNTCLVGGLEANGEPFIGYCSMLGVSFTENYVATGFGAYLAMPILRECLEIK 180
Query: 175 -----ENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
N++ ED + + M+ L +RD A + Q+A + +EG I+ P LK W
Sbjct: 181 AGGDPNNITEEDAISTMTSAMKQLYFRDCRAFDTYQMAIVNKEGIQINGPLRLKCDWSIA 240
Query: 230 AF 231
+
Sbjct: 241 EY 242
>gi|442759993|gb|JAA72155.1| Putative 20s proteasome regulatory subunit beta type psmb4/pre4
[Ixodes ricinus]
Length = 254
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 143/212 (67%), Gaps = 3/212 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT P VT TSV+ +K+ G+++AAD+GG YG+ + ++ R+ + ++GA G+ +
Sbjct: 33 QRTLHPMVTTTSVLGVKFDGGVMLAADLGGYYGTLAKLRNCPRLLKVNDQIIVGAGGDYA 92
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
D+Q L +D+ ++ + +DG L PK L+S+LTRVMYNRR+KFDPLWN+ ++GG+++G
Sbjct: 93 DYQFLKGVMDQKVISEECLNDGFKLKPKSLYSWLTRVMYNRRSKFDPLWNTYLVGGLQDG 152
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE---NLSYEDGVKLLEKCMRVLL 194
+LG V M+G F+ +ATG+G ++A+P++RD++ + +LS E+ L K +RVL
Sbjct: 153 VPFLGQVDMLGTAFQSDTLATGYGAYIAQPLMRDDYEKKGGHLSQEEAKDTLVKSLRVLY 212
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD +++K Q+A +T EG I P+ L + W
Sbjct: 213 YRDGRSLDKYQLAVVTAEGVKIEGPFQLDSNW 244
>gi|156542911|ref|XP_001601321.1| PREDICTED: proteasome subunit beta type-4-like [Nasonia
vitripennis]
Length = 262
Score = 186 bits (472), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 139/213 (65%), Gaps = 3/213 (1%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+QRTQ P TGTSV+ L++KDGI++AAD+ SYGS R+++ ER+ + + +LGA G+
Sbjct: 40 MQRTQSPMTTGTSVIGLQFKDGIVIAADVLASYGSLARFRNCERVIKVNDNIILGAGGDY 99
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+D+Q L +++ IL + DDG +L PK LH +LTRVMYN+R+KFDPLWN+ ++GG+++
Sbjct: 100 ADYQYLRSIIEQKILDERCLDDGFTLKPKSLHCWLTRVMYNKRSKFDPLWNNFIIGGIED 159
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMRVLL 194
+ +LG V +G F D +ATG+G ++A P+L + N ++ ++ L+ K M+VL
Sbjct: 160 DKLFLGTVDKLGTAFTDPVIATGYGAYMASPLLNKAYEANPEMTEQEATDLIYKAMQVLF 219
Query: 195 YRDRSAVNKLQIAKIT-EEGTTISQPYALKTFW 226
YRD + K + IT E+G I P + W
Sbjct: 220 YRDARSFPKYHLGVITKEKGVEIKGPITIDHNW 252
>gi|392574771|gb|EIW67906.1| hypothetical protein TREMEDRAFT_40058 [Tremella mesenterica DSM
1558]
Length = 274
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 146/228 (64%), Gaps = 14/228 (6%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ TQ P VTGTSV+ LK++ G+++AAD SYGS R++ ++R+ P+G H ++ +G+
Sbjct: 36 PVSHTQQPVVTGTSVLGLKFRGGVMLAADNLASYGSLARFRDIQRLHPLGPHCVMAVAGD 95
Query: 76 ISDFQELLRNLDELILYD---NMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
++DFQ L R+L ++ + ++ D+ SL +++YL+ + YNRR+K DP+WN++++G
Sbjct: 96 MADFQWLKRDLGSILREEEALSLTDNHPSLSAANIYNYLSIIFYNRRSKGDPVWNTVLVG 155
Query: 133 GVKNGQK--YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH---------ENLSYED 181
G +K +LG V ++G + +ATG+G H+A+P+LR+ + E + E+
Sbjct: 156 GWDEAKKESFLGYVDLLGTTYSSPTLATGYGAHIAQPLLREAFEAKAGLDGKGELPTAEE 215
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
KLL+ CM+VL YRD ++NK Q+A IT EG IS + KT WGF
Sbjct: 216 AEKLLDDCMKVLFYRDARSLNKYQVATITAEGVKISDSKSAKTEWGFA 263
>gi|226487134|emb|CAX75432.1| proteasome (prosome macropain) subunit beta type 4 [Schistosoma
japonicum]
Length = 247
Score = 186 bits (471), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 148/242 (61%), Gaps = 11/242 (4%)
Query: 1 MESIQAKQGLVGPN---DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKS 57
M+S+Q + N D T P TGTSV+ +KYKDG+++AAD+ SYGS +Y
Sbjct: 1 MDSLQVEHPRDFANVCGDQKHHTMTPICTGTSVIGIKYKDGVVLAADLLVSYGSLAKYMD 60
Query: 58 VERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYN 117
ER+ + + +++ SG+++DFQ L ++ EL DN+ DG L P LHS++TR++YN
Sbjct: 61 FERMFKVNESTVMCCSGDVADFQFLKHHVKELTHVDNLLSDGFKLSPHALHSWITRILYN 120
Query: 118 RRNKFDPLWNSLVLGGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-- 174
RR++ +PLWN+ ++GG++ NG+ ++G +M+GV+F +++VATGFG +LA PILR+
Sbjct: 121 RRSRLEPLWNTYLVGGIEANGEPFIGYCNMLGVSFSENYVATGFGAYLATPILRECLEIK 180
Query: 175 -----ENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
+N++ E + + M+ L +RD A + Q+A I +EG I P LK W
Sbjct: 181 AKNDPKNITEEGAISTITCAMKQLYFRDCRAFDTYQMAVINKEGVQIHGPLHLKCDWSIA 240
Query: 230 AF 231
+
Sbjct: 241 EY 242
>gi|330914585|ref|XP_003296699.1| hypothetical protein PTT_06865 [Pyrenophora teres f. teres 0-1]
gi|311331040|gb|EFQ95206.1| hypothetical protein PTT_06865 [Pyrenophora teres f. teres 0-1]
Length = 260
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 143/226 (63%), Gaps = 10/226 (4%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
GPN Q TQ P VTGTSV+A K+KDG+++AAD SYGS R+ V+R++ ++
Sbjct: 27 AGPN---QHTQSPIVTGTSVLAAKFKDGVVIAADNLASYGSLARFTDVKRLRKFNDEVVV 83
Query: 71 GASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
G G++SD Q L R L+ L + +N NSL K LH+YL++VMYNRR+KFDPLWN ++
Sbjct: 84 GFGGDVSDMQYLDRLLNSLDIRENYSSSENSLNAKNLHTYLSKVMYNRRSKFDPLWNHML 143
Query: 131 LGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR----DEWH-ENLSYEDGVK 184
+ G+ +K +L ++G F +ATGFG HLA+PILR DE EN++ E V+
Sbjct: 144 IVGMDGEKKPFLASADLLGTTFSSPSLATGFGAHLAQPILRTILPDEAAVENVTREQAVE 203
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
+++CM+VL YRD +++K IA +T++G + + L+ W F
Sbjct: 204 KIKECMKVLFYRDARSMDKYSIAVVTKDGVDLDENVKLENQSWAFA 249
>gi|403375568|gb|EJY87760.1| Proteasome subunit beta type [Oxytricha trifallax]
Length = 244
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 142/230 (61%), Gaps = 4/230 (1%)
Query: 10 LVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSL 69
L+ + P TQ+P GTSV+ L+YKDG+++AAD +YGS + K +R+ P+ +
Sbjct: 3 LISGSQPRTHTQVPVNIGTSVMGLRYKDGVMLAADTAVAYGSMKKTKHAKRMAPLSVDTA 62
Query: 70 LGASGEISDFQELLRNLDELILYDNMWDDGN-SLGPKELHSYLTRVMYNRRNKFDPLWNS 128
+ SGE+SDFQELL+ + D + +DG L P++ +YL+RV Y RR K DPLWN
Sbjct: 63 IACSGEMSDFQELLKIFKDKHESDVIENDGALFLKPRDYFNYLSRVQYQRRMKMDPLWNG 122
Query: 129 LVLGGVK--NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
++GGV NG+ +LGMV + G E + + TG H + ++++ W +LS E+ K++
Sbjct: 123 TIVGGVSQTNGEVFLGMVDLYGTKVEGNFLLTGLAAHYCQVLMQNAWRPDLSEEEARKVI 182
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEE-GTTISQPYALKTFWGFTAFQNPT 235
E CM+V+ YRD+ A +++QI IT++ G I +PY ++ W F F+ T
Sbjct: 183 EDCMKVMFYRDKKASDEIQITTITKDAGVQIHEPYKIEGEWNFNFFREKT 232
>gi|451848859|gb|EMD62164.1| hypothetical protein COCSADRAFT_147652 [Cochliobolus sativus
ND90Pr]
gi|451998682|gb|EMD91146.1| hypothetical protein COCHEDRAFT_1225142 [Cochliobolus
heterostrophus C5]
Length = 260
Score = 183 bits (465), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/224 (43%), Positives = 141/224 (62%), Gaps = 10/224 (4%)
Query: 12 GPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLG 71
GPN Q TQ P VTGTSV+A K+KDG+++AAD SYGS R+ V+R++ ++G
Sbjct: 28 GPN---QHTQSPIVTGTSVLAAKFKDGVVIAADNLASYGSLARFTDVKRLRKFNDEVVVG 84
Query: 72 ASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
G++SD Q + R L+ L + +N NSL K LH+YL +VMYNRR+KFDPLWN L++
Sbjct: 85 FGGDVSDMQYIDRLLNSLDIRENYSSSENSLNAKNLHTYLAKVMYNRRSKFDPLWNHLLI 144
Query: 132 GGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR----DEWH-ENLSYEDGVKL 185
G+ K +L ++G F +ATGFG HLA+PILR DE EN++ E V+
Sbjct: 145 VGMDGESKPFLASADLLGTTFTSPSLATGFGAHLAQPILRTILPDEAAVENVTKEQAVEK 204
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
+++CM+VL YRD +++K IA +T+EG + + L+ W F
Sbjct: 205 IKECMKVLFYRDARSMDKYSIAVVTKEGVELDENVKLENQSWAF 248
>gi|296415988|ref|XP_002837664.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633544|emb|CAZ81855.1| unnamed protein product [Tuber melanosporum]
Length = 260
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 133/201 (66%), Gaps = 6/201 (2%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P Q TQ P VTGTSVVALK+ G+++AAD SYGS R+ +VER+K +G H+++GA G+
Sbjct: 29 PNQHTQSPIVTGTSVVALKFNGGVVIAADNLASYGSLARFTNVERLKQVGTHTVVGAGGD 88
Query: 76 ISDFQELLRNL-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
ISD Q L L D LI+ + +DG+ L ++ YL++V+Y RR KFDPLWN+L++ G
Sbjct: 89 ISDMQYLHEKLLDSLIIKEEYQNDGHHLRASHIYRYLSKVLYQRRCKFDPLWNTLLVAGW 148
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR----DEWH-ENLSYEDGVKLLEKC 189
+G+ +L ++G F +ATGFG HLA P+LR DE EN++ E V +E+C
Sbjct: 149 DDGKPFLASADLLGTTFSAPALATGFGAHLAVPLLRRVCPDEAAVENITREQAVDTIEEC 208
Query: 190 MRVLLYRDRSAVNKLQIAKIT 210
M+VL YRD +++K +A IT
Sbjct: 209 MKVLFYRDARSLSKYSLAIIT 229
>gi|56757988|gb|AAW27134.1| SJCHGC06662 protein [Schistosoma japonicum]
Length = 248
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 148/240 (61%), Gaps = 11/240 (4%)
Query: 1 MESIQAKQGLVGPN---DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKS 57
M+S+Q + N D T P TGTSV+ +KYKDG+++AAD+ SYGS +Y
Sbjct: 1 MDSLQVEHPRDFANVCGDQKHHTMTPICTGTSVIGIKYKDGVVLAADLLVSYGSLAKYMD 60
Query: 58 VERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYN 117
ER+ + + +++ SG+++DFQ L ++ EL DN+ DG L P LHS++TR++YN
Sbjct: 61 FERMFKVNESTVMCCSGDVADFQFLKHHVKELTHVDNLLSDGFKLSPHALHSWITRILYN 120
Query: 118 RRNKFDPLWNSLVLGGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-- 174
RR++ +PLWN+ ++GG++ NG+ ++G +M+GV+F +++VATGFG +LA PILR+
Sbjct: 121 RRSRLEPLWNTYLVGGIEANGEPFIGYCNMLGVSFSENYVATGFGAYLATPILRECLEIK 180
Query: 175 -----ENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
+N++ ED + + M+ L +RD A + Q+A I +EG I P + G +
Sbjct: 181 AKNDPKNITEEDAISTITCAMKQLYFRDCRAFDTYQMAVINKEGVQIHGPVTPENVTGLS 240
>gi|189193573|ref|XP_001933125.1| proteasome component PRE4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187978689|gb|EDU45315.1| proteasome component PRE4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 260
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 97/226 (42%), Positives = 142/226 (62%), Gaps = 10/226 (4%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
GPN Q TQ P VTGTSV+A K+KDG+++AAD SYGS R+ V+R++ ++
Sbjct: 27 AGPN---QHTQSPIVTGTSVLAAKFKDGVVIAADNLASYGSLARFTDVKRLRKFNDEVVV 83
Query: 71 GASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
G G++SD Q L R L+ L + +N NSL K LH+YL +VMYNRR+KFDPLWN ++
Sbjct: 84 GFGGDVSDMQYLDRLLNSLDIRENYSSSENSLNAKNLHTYLAKVMYNRRSKFDPLWNHML 143
Query: 131 LGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR----DEWH-ENLSYEDGVK 184
+ G+ +K +L ++G F +ATGFG HLA+PILR DE EN++ E V+
Sbjct: 144 IVGMDGEKKPFLASADLLGTTFSSPSLATGFGAHLAQPILRTILPDEAAVENVTREQAVE 203
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
+++CM+VL YRD +++K IA +T++G + + L+ W F
Sbjct: 204 KIKECMKVLFYRDARSMDKYSIAVVTKDGVDLDENVKLENQSWAFA 249
>gi|254567185|ref|XP_002490703.1| Beta 7 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|238030499|emb|CAY68423.1| Beta 7 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|328351088|emb|CCA37488.1| 20S proteasome subunit beta 7 [Komagataella pastoris CBS 7435]
Length = 265
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/207 (43%), Positives = 136/207 (65%), Gaps = 6/207 (2%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+KY+DGI++AAD GSYGS R+ +ER+ P+G +++G SG+
Sbjct: 32 PKMNTQQPIVTGTSVIAVKYQDGIVLAADNLGSYGSLARFSDIERLLPVGDSTIVGISGD 91
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
ISD Q++ R LD+L + D+ + +L P+ +H YL+RV YNRR+K DPLWNS ++ G+
Sbjct: 92 ISDLQQIERILDDLQVQDSYDMEKPNLKPEHVHEYLSRVFYNRRSKMDPLWNSTIVAGLS 151
Query: 136 NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
+ + L ++GV + +ATGFG HLA P+LR +E L+ E+ V+L+ C
Sbjct: 152 STNELVLKYADLLGVTYSSPAIATGFGAHLAIPLLRRKVETEEDASKLTEEEAVELVRNC 211
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTI 216
M+VL YRD +++K +A I++ I
Sbjct: 212 MKVLFYRDARSIDKYSLAVISQSRKKI 238
>gi|169601776|ref|XP_001794310.1| hypothetical protein SNOG_03762 [Phaeosphaeria nodorum SN15]
gi|160706006|gb|EAT88967.2| hypothetical protein SNOG_03762 [Phaeosphaeria nodorum SN15]
Length = 309
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 97/225 (43%), Positives = 140/225 (62%), Gaps = 10/225 (4%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
GPN Q TQ P VTGTSV+A K+KDG+++AAD SYGS R+ V+R++ ++
Sbjct: 76 AGPN---QHTQSPIVTGTSVLAAKFKDGVVIAADNLASYGSLARFTDVKRLRKFNDEVVV 132
Query: 71 GASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
G G++SD Q L R L+ L + + + +L K LH+YL +VMYNRR+KFDPLWN L+
Sbjct: 133 GFGGDVSDMQYLDRLLNSLDIRETYSSNETALNAKNLHTYLAKVMYNRRSKFDPLWNHLL 192
Query: 131 LGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR----DEWH-ENLSYEDGVK 184
+ G+ K +L ++G F +ATGFG HLA+PILR DE E ++ E V+
Sbjct: 193 IAGMDGESKPFLASADLLGTTFSSPSLATGFGAHLAQPILRTILPDEASVEKVTKEQAVE 252
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
+++CM+VL YRD +++K IA IT+EG T+ + L+ W F
Sbjct: 253 KIKECMKVLFYRDARSMDKYSIAVITKEGVTLDENVQLENQSWAF 297
>gi|91087761|ref|XP_974991.1| PREDICTED: similar to predicted protein [Tribolium castaneum]
gi|270009385|gb|EFA05833.1| hypothetical protein TcasGA2_TC008617 [Tribolium castaneum]
Length = 254
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/222 (39%), Positives = 138/222 (62%), Gaps = 3/222 (1%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
P+D Q +Q P T TS+VA++Y G+++A D+ GSYGS RY++ RI + + +L
Sbjct: 29 TAPSDFRQHSQAPVTTATSIVAMQYNKGVIIAGDLLGSYGSLARYRNCPRIMKVNDNIIL 88
Query: 71 GASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
GA G+ +DFQ + +++ I+ ++ DDG L PK L+ +LTR+MYNRR+KFDP WN+ V
Sbjct: 89 GAGGDYADFQYVKDIIEQKIIDEDCLDDGFKLKPKSLYCWLTRIMYNRRSKFDPFWNNFV 148
Query: 131 LGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEK 188
+GG+++G+ +LG V +G + D V +G+G ++A P+LR+ +N S + L+EK
Sbjct: 149 VGGLQDGEPFLGTVDKLGTAYTDKIVCSGYGAYIAVPLLREALEKNPTPSKAEARALVEK 208
Query: 189 CMRVLLYRDRSAVNKLQIAKITE-EGTTISQPYALKTFWGFT 229
CM VL YRD + K QIA I E +G + ++ W
Sbjct: 209 CMEVLYYRDARSYPKYQIATIDEADGAVVEDLVSVNQNWSLA 250
>gi|126136501|ref|XP_001384774.1| B-type subunit of proteasome [Scheffersomyces stipitis CBS 6054]
gi|126091996|gb|ABN66745.1| B-type subunit of proteasome [Scheffersomyces stipitis CBS 6054]
Length = 281
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/217 (41%), Positives = 141/217 (64%), Gaps = 8/217 (3%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P TQ P +TGTSV+++K+KDG+++AAD GSYGS +R+ ++ER+ +G+ +++G S
Sbjct: 38 NFPKMNTQQPIITGTSVISVKFKDGVILAADNLGSYGSLLRFNNIERLIKVGQETVVGIS 97
Query: 74 GEISDFQELLRNLDELILYDNMWDD--GNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
G+ISD Q++ R LDEL + ++D G++L +H YL+RV+YNRR+K +PLWN++++
Sbjct: 98 GDISDLQQIERILDELETTEEVYDSDGGHNLRAPHVHEYLSRVLYNRRSKMNPLWNAIIV 157
Query: 132 GGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKL 185
GG + + +L + ++GV + S +ATGFG+HLA P+LR D + N+S E K+
Sbjct: 158 GGFNDDRTPFLKYIDLLGVTYGASTLATGFGSHLAVPLLRQLIPNDVDYVNVSEEQARKV 217
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL 222
+E CMRVL YRD A +K + I Y
Sbjct: 218 VEDCMRVLFYRDARASDKFSLVTIKRSAEEPDTSYTF 254
>gi|443697819|gb|ELT98117.1| hypothetical protein CAPTEDRAFT_178772 [Capitella teleta]
Length = 215
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 142/204 (69%), Gaps = 2/204 (0%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
VTGTSV+ +K+ GI++AAD GSYGS R++ R+ + + S+LGA G+ +D+Q L
Sbjct: 2 VTGTSVLGVKFDGGIIIAADTLGSYGSLARFRDCPRVMKVNECSVLGAGGDYADYQHLKA 61
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+++ +L ++ +DG + PK L ++LTR+MY++R+ F+PLWN+LV+GG+++G+ YLG +
Sbjct: 62 MIEQKVLDEDNLNDGFNYTPKSLFNWLTRIMYHKRSNFNPLWNTLVIGGLQDGEPYLGYI 121
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMRVLLYRDRSAVN 202
+GV + + VATGFG++LA P+LRD +N ++ D +L+++ +RVL YRD + N
Sbjct: 122 DKLGVAYTNDTVATGFGSYLAAPMLRDGLEKNPKMTEADAKQLIDRALRVLFYRDARSWN 181
Query: 203 KLQIAKITEEGTTISQPYALKTFW 226
+ Q+A +T++G I P + KT W
Sbjct: 182 RYQLAIVTKDGVRIEGPLSSKTDW 205
>gi|326429338|gb|EGD74908.1| proteasome subunit beta type [Salpingoeca sp. ATCC 50818]
Length = 246
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 147/220 (66%), Gaps = 3/220 (1%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
D RT P VTGTSV+ +K+ G+ +AAD GSYGS R++ + R+ +G +++G G
Sbjct: 22 DARTRTMRPIVTGTSVLGIKFDGGVAIAADTLGSYGSLARFREISRMCKVGNQTVVGGGG 81
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+++DF + L+ L + + ++D + + P+ +H+YLTRV+YNRR++ +PLWN++++ G+
Sbjct: 82 DVADFHMIRDLLNTLEIENREYEDEHDIKPQAVHTYLTRVLYNRRSQMNPLWNTVLVAGM 141
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLAR-PILRD--EWHENLSYEDGVKLLEKCMR 191
++G+ YLG +GV +++S +A G+G ++A P+LR+ + E ++ + V LL+KC++
Sbjct: 142 QDGEPYLGYTDKLGVAYQESTLACGYGAYIALGPLLREVADKGEPITKDAAVALLQKCLK 201
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAF 231
VL YRD ++N+ +IA +T EG IS P + ++ WG +
Sbjct: 202 VLWYRDARSLNRFEIATVTAEGVDISAPQSSESDWGIASM 241
>gi|224013762|ref|XP_002296545.1| probable 20S proteasome beta type subunit [Thalassiosira pseudonana
CCMP1335]
gi|220968897|gb|EED87241.1| probable 20S proteasome beta type subunit [Thalassiosira pseudonana
CCMP1335]
Length = 266
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 143/230 (62%), Gaps = 16/230 (6%)
Query: 29 SVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQ---ELLRN 85
SV+ +KY++G+++AAD SYGS +YK+ +R+ P+ +L+G SGE SD Q +LLR
Sbjct: 37 SVLGVKYRNGVMLAADTLCSYGSLAKYKNAKRLLPVNSRTLIGGSGEYSDLQAINDLLRR 96
Query: 86 --LDELILYDNMWDD-GNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK--- 139
L++ D+++++ N KE+ SYL VMYNRRNK +PLWN +V+ G K +
Sbjct: 97 NALEDRCTADSLYEEENNEECAKEVWSYLRAVMYNRRNKMNPLWNDIVVAGFKQNEDGST 156
Query: 140 ----YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLY 195
+LG+V IG +ED +ATGFG ++A P++R+++H ++ + LLE C+R+L Y
Sbjct: 157 SDEPFLGIVDKIGTAYEDDILATGFGGYIALPLMREKYHPDMEEGEARALLEDCLRILFY 216
Query: 196 RDRSAVNKLQIAKITEEGTT-ISQPYALKTFWGFTAF--QNPTAGAEGSW 242
RD A+N++QIAK+ G +S+PY L T W F F G +G W
Sbjct: 217 RDCRALNRVQIAKVERGGQVLVSEPYELDTHWDFEGFVTNKGEMGTDGGW 266
>gi|219114096|ref|XP_002176225.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402809|gb|EEC42786.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 248
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 98/235 (41%), Positives = 142/235 (60%), Gaps = 12/235 (5%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPI-GKHSLLGASGEI 76
Q T P VTGTSV+ + Y G+L+AAD SYGS + ++ R+ I G +++GASGE
Sbjct: 10 QHTTRPIVTGTSVLGIVYDGGVLLAADTLLSYGSMAKDQNARRLHVIPGTFTMIGASGEY 69
Query: 77 SDFQELLRNLDE-------LILYDNMW-DDGNSLGPKELHSYLTRVMYNRRNKFDPLWNS 128
SDFQ++ + L+E L D+++ D S+ +YL VMY RRNK +P WN
Sbjct: 70 SDFQKVCQILEEKALEETHTSLMDSLYADTSQSITAASTWNYLRMVMYARRNKMNPFWND 129
Query: 129 LVLGGV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLE 187
+++ G + G+ +LGMV IG +D+ +ATGFG++LA PI+R++W +LS + LLE
Sbjct: 130 ILVAGTDRQGKPFLGMVDKIGTTVQDNFLATGFGSYLALPIMREKWRPDLSEGEARALLE 189
Query: 188 KCMRVLLYRDRSAVNKLQIAKITEEG--TTISQPYALKTFWGFTAFQNPTAGAEG 240
CM+VL YRD A K+Q+AK E +S+PY L+T W +F P A EG
Sbjct: 190 DCMKVLFYRDCRASCKIQLAKYATESKEAIVSEPYQLETSWDAPSFVQPVADLEG 244
>gi|336274030|ref|XP_003351769.1| hypothetical protein SMAC_00313 [Sordaria macrospora k-hell]
gi|380096049|emb|CCC06096.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 265
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/227 (42%), Positives = 141/227 (62%), Gaps = 14/227 (6%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P Q TQ P VTGTSV+A+KYKDG++MAAD SYGS R+ V+R++ S++G SG+
Sbjct: 29 PRQATQAPIVTGTSVIAIKYKDGVVMAADNLASYGSLARFPDVKRLRVFLDSSVIGFSGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNS------LGPKELHSYLTRVMYNRRNKFDPLWNSL 129
+SD Q L R+L EL + D ++D +S L LH YL +++Y RRN FDPLWN L
Sbjct: 89 VSDMQFLDRHLTELSI-DEAYEDPSSDSKAGQLNAANLHKYLQKLLYKRRNDFDPLWNQL 147
Query: 130 VLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGV 183
++ G K YL V + G +F +ATGFG+ LA+PI+R +E LS E+ V
Sbjct: 148 LIAGFDGDSKPYLASVDLRGTSFTSPSLATGFGSALAQPIMRRYAATEEDAARLSREEAV 207
Query: 184 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGFT 229
+++++CM+VL YRD ++++ IA +T+EG + + L K W F
Sbjct: 208 EVVKECMKVLYYRDARSLDRYSIAVVTKEGVELKEDEQLEKQSWAFA 254
>gi|341038684|gb|EGS23676.1| hypothetical protein CTHT_0003730 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 285
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 144/229 (62%), Gaps = 17/229 (7%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+KDG++MAAD SYGS R+ V+R+ P H+++G G+
Sbjct: 29 PKTATQQPIVTGTSVIAIKFKDGVVMAADNLASYGSLARFTDVKRLHPFLGHTIVGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDD---------GNSLGPKELHSYLTRVMYNRRNKFDPLW 126
+SD Q L R+L+EL + D +D G+ L LH YL+++MY RRN FDPLW
Sbjct: 89 VSDMQYLTRHLNELAI-DEAYDHEAASAQSGGGSHLNAANLHKYLSKLMYRRRNSFDPLW 147
Query: 127 NSLVLGGVKN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-----ENLSYE 180
N++++ G + G+ +LG V + G F +ATGFG LA+PI+R EN++ +
Sbjct: 148 NAILVAGFDSQGKPFLGSVDLRGTAFTSPSLATGFGAMLAQPIMRKYAATEGDTENMTRD 207
Query: 181 DGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGF 228
+ V+++++CM+VL YRD ++++ +A +T++G +S+ L + W F
Sbjct: 208 EAVRVVKECMKVLFYRDARSLDRYSLAVVTKDGVELSEDEQLEQQSWAF 256
>gi|449015741|dbj|BAM79143.1| 20S core proteasome subunit beta 7 [Cyanidioschyzon merolae strain
10D]
Length = 222
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/211 (40%), Positives = 130/211 (61%), Gaps = 5/211 (2%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P T+ P VTG+SV+ ++ DG+++A D SYGS R++ + R+ ++ GE
Sbjct: 5 PTHTTE-PIVTGSSVLGVQCVDGVVLACDTLASYGSLARFQRITRLHQPAPGVVIAGGGE 63
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
SD Q+L R D + + +DG L P+ LHSYL RV+Y RR++ DPL+NSL + G
Sbjct: 64 YSDLQQLFRITDNIFRQEFCQEDGYELSPRALHSYLARVLYGRRSRMDPLYNSLAVAG-- 121
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLY 195
++LG + + G FE VATG G LA P++R +WH L+ ++GV+LLE+C+RVL Y
Sbjct: 122 -KGRFLGCIDLYGTAFESEAVATGIGALLALPLIRKQWHAALAMDEGVRLLEECLRVLYY 180
Query: 196 RDRSAVNKLQIAKITEEGTT-ISQPYALKTF 225
RD A+ +Q+AK+++ G IS+PY L
Sbjct: 181 RDCRALRSVQVAKVSDSGEVLISEPYELSNL 211
>gi|289740585|gb|ADD19040.1| 20S proteasome regulatory subunit beta type PSMB4/PRE4 [Glossina
morsitans morsitans]
Length = 273
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 136/205 (66%), Gaps = 2/205 (0%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
Q P TG+SVV +K+ G+++AAD SYGS RY+ +ER+ + +++GASG+ +
Sbjct: 54 QHAFSPITTGSSVVGIKFDGGVMIAADNLVSYGSLARYQDIERVFKVNDKTIMGASGDFA 113
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ L R++D+ I+ D DD + PK L+++LTR++YNRR++F+PLW +V+GG +G
Sbjct: 114 DFQSLKRSIDQKIIEDTCDDDEIIMKPKALYTWLTRILYNRRSRFNPLWLEIVVGGFDDG 173
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMRVLLY 195
+LG V + G +ED+ VAT FG HLA P++R++ + L+ + ++L +CM VL Y
Sbjct: 174 VPFLGHVDLRGRAYEDTVVATSFGKHLALPLVREKLGDKKLLTLSEAKEVLRECMEVLYY 233
Query: 196 RDRSAVNKLQIAKITEEGTTISQPY 220
RD A++K +A T++G+ I P+
Sbjct: 234 RDCRAISKYMVAVCTKDGSVIEGPF 258
>gi|119467912|ref|XP_001257762.1| proteasome component Pre4, putative [Neosartorya fischeri NRRL 181]
gi|119405914|gb|EAW15865.1| proteasome component Pre4, putative [Neosartorya fischeri NRRL 181]
Length = 260
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 139/221 (62%), Gaps = 7/221 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSVVA+K+ G+ +AAD SYGS R+ V+R++ G+ +++G SG+
Sbjct: 29 PKSHTQSPAVTGTSVVAVKFNGGVAVAADNLASYGSLARFSDVKRLRVFGESAVIGFSGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L+ + + +N GN+L K LH+YL++V Y RR++F+PLWN +++ G
Sbjct: 89 VSDMQHIDRLLESIDIRENYSTHGNTLNAKNLHTYLSKVFYKRRSEFNPLWNQVLVAGFD 148
Query: 136 -NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
N Q +L ++G F H+ATGFG HLA PILR ++ E ++ E+ V L++C
Sbjct: 149 GNNQPFLSSADLLGTTFSAPHLATGFGAHLAIPILRRLFPDEKTVEEITKEEAVNALKEC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGFT 229
++VL YRD +++K +A IT+EG + + + K W F
Sbjct: 209 LKVLWYRDARSLDKFSLAVITKEGVEMHEDQKIEKQSWAFA 249
>gi|190345063|gb|EDK36881.2| hypothetical protein PGUG_00979 [Meyerozyma guilliermondii ATCC
6260]
Length = 273
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 139/204 (68%), Gaps = 8/204 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P +Q P +TGTSV ++K+KDG+++AAD GSYGS +R+ ++ERI +GK +++G SG+
Sbjct: 39 PKMNSQQPIITGTSVNSIKFKDGVIVAADNMGSYGSLLRFNNIERIFKVGKETVVGVSGD 98
Query: 76 ISDFQELLRNLDELILYDNMWDD--GNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
ISDFQ++ R LDEL + + ++D+ G++L +H YLTRV+YNRR+K DPLWN++V+ G
Sbjct: 99 ISDFQQIQRLLDELEITEEIYDNDGGHNLRAPNVHEYLTRVLYNRRSKMDPLWNAVVVAG 158
Query: 134 VKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLE 187
+ + +L V ++GV + S + TGFG HLA P+LR D+ ++N++ E + +
Sbjct: 159 FNDDKTPFLRYVDLLGVTYGSSAICTGFGAHLAIPLLRQLVPDDKDYQNVTEEQAREAII 218
Query: 188 KCMRVLLYRDRSAVNKLQIAKITE 211
CM+VL YRD + +K + + +
Sbjct: 219 NCMKVLFYRDARSSDKFTLVTLKQ 242
>gi|452980470|gb|EME80231.1| hypothetical protein MYCFIDRAFT_63440 [Pseudocercospora fijiensis
CIRAD86]
Length = 273
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/232 (40%), Positives = 138/232 (59%), Gaps = 15/232 (6%)
Query: 12 GPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLG 71
G PI TQ P VTGTSV+ALK+K G+++AAD SYGS R+ V R+KP K +++G
Sbjct: 30 GTQQPITHTQSPIVTGTSVIALKFKSGVVIAADNLASYGSLARFTDVHRLKPFNKKAVVG 89
Query: 72 ASGEISDFQELLRNLDELILYDNMWD--------DGNSLGPKELHSYLTRVMYNRRNKFD 123
G++SD Q + R L L + +N D + + K LH+YL +VMY RR+ F+
Sbjct: 90 FGGDVSDMQYIDRLLKSLDVEENYSTGSHTEEKGDADMMSAKNLHTYLGKVMYKRRSDFN 149
Query: 124 PLWNSLVLGGV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENL 177
PLWN+L++ G+ + G +L ++G F +ATGFG HLA+PILR +E +NL
Sbjct: 150 PLWNALLVAGLDEKGTPFLASADLLGTTFSAPTMATGFGAHLAQPILRKSVPDEEASKNL 209
Query: 178 SYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
E VK ++ CM+VL YRD ++N+ IA I E+G + + L+ W F
Sbjct: 210 DRETAVKAIKDCMKVLFYRDARSMNEYSIAVIDEKGVELHEDEKLENQSWDF 261
>gi|255717565|ref|XP_002555063.1| KLTH0G00550p [Lachancea thermotolerans]
gi|238936447|emb|CAR24626.1| KLTH0G00550p [Lachancea thermotolerans CBS 6340]
Length = 265
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/225 (41%), Positives = 146/225 (64%), Gaps = 11/225 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+++KYKDG+++AAD GSYGS +R+ VER+ P+G+++++G SG+
Sbjct: 30 PSMHTQQPIVTGTSVISMKYKDGVIIAADRLGSYGSLLRFSDVERLFPVGRNTVVGISGD 89
Query: 76 ISDFQELLRNLDELIL---YDNMW-DDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISD Q L LDE+ YDN + +D +L P + YL VMYNRR+K +PLWN+L++
Sbjct: 90 ISDMQHLENLLDEMQTENNYDNEYAEDEEALKPSYVFEYLANVMYNRRSKMNPLWNALIV 149
Query: 132 GGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLL 186
G+++G+ +L V+++GV + +ATGFG HLA P+LR + + S ED K +
Sbjct: 150 AGLEDGKPFLKYVNLLGVTYSAPSLATGFGAHLALPLLRKIVDSESDVKKTSAEDAEKSI 209
Query: 187 EKCMRVLLYRDRSAVNKLQIAKI-TEEGTTISQPYALKTF-WGFT 229
++ M+VL YRD + IA + +++G +++ ++ WGF
Sbjct: 210 KEAMKVLFYRDARSSRNYSIAIVDSKKGLVLNKDAVVEDMVWGFA 254
>gi|320581718|gb|EFW95937.1| Beta 7 subunit of the 20S proteasome [Ogataea parapolymorpha DL-1]
Length = 274
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 135/207 (65%), Gaps = 6/207 (2%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P +TGTSV+A++YKDG++MAAD G+YGS ++ VERI +G +++G SG+
Sbjct: 41 PSMHTQQPMITGTSVIAVRYKDGVVMAADNMGAYGSLMKLDDVERIIRVGSETIVGISGD 100
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV- 134
ISD Q L R LD+L + D+ + ++L +H YLTRV+YNRR+K DPLWN+ ++ G
Sbjct: 101 ISDLQYLERILDDLAVEDSYDMEQDNLKASYVHEYLTRVLYNRRSKMDPLWNACIVAGFD 160
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-----ENLSYEDGVKLLEKC 189
+ G+ ++ V ++GV++ +ATGFG HLA P+LR + E L+ ED V L++ C
Sbjct: 161 EEGEPFMKYVDLLGVSYASPSLATGFGAHLAIPLLRKKADTMKDVEKLTKEDAVSLVKDC 220
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTI 216
M++L YRD +++K + + + I
Sbjct: 221 MKILFYRDARSLDKYTLCVVDKTTKNI 247
>gi|145486963|ref|XP_001429487.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396580|emb|CAK62089.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 135/216 (62%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
Q T P VTG SV+AL YK G+++ AD SYGS +K+VE+I + K+++ +SGE S
Sbjct: 12 QHTTQPIVTGGSVIALAYKGGVVVGADTLCSYGSMADFKNVEKIAQVSKNTIYVSSGEFS 71
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ+++R L ++ +DDG P++ +YL R+ Y RR K +PL+ V+ G NG
Sbjct: 72 DFQQVVRELAKIDRSALQYDDGVHPSPRDYGNYLARLSYKRRCKINPLYLQNVIAGFHNG 131
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
++YLG+V + G E + V TGF ++ + I+ + W+EN + + +++ +C +VL RD
Sbjct: 132 ERYLGLVDIYGTYLESNFVTTGFASYFCKAIISNYWNENCTLDQAKQVIRECFKVLFCRD 191
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQN 233
A + +Q+A + E+GT I QP ++T W F+ F+N
Sbjct: 192 CRAHDVIQLAYVDEQGTHIEQPERVETKWDFSGFKN 227
>gi|70991377|ref|XP_750537.1| proteasome component Pre4 [Aspergillus fumigatus Af293]
gi|66848170|gb|EAL88499.1| proteasome component Pre4, putative [Aspergillus fumigatus Af293]
gi|159124093|gb|EDP49211.1| proteasome component Pre4, putative [Aspergillus fumigatus A1163]
Length = 260
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 139/221 (62%), Gaps = 7/221 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSVVA+K+ G+ +AAD SYGS R+ V+R++ G+ +++G SG+
Sbjct: 29 PKSHTQSPAVTGTSVVAVKFGGGVAIAADNLASYGSLARFSDVKRLRVFGESAVIGFSGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L+ + + +N GN+L K LH+YL++V Y RR++F+PLWN +++ G
Sbjct: 89 VSDMQHIDRLLESIDIRENYSTHGNTLNAKNLHTYLSKVFYKRRSEFNPLWNQVLVAGFD 148
Query: 136 -NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
N Q +L ++G F H+ATGFG HLA PILR ++ E ++ E+ V L++C
Sbjct: 149 GNNQPFLSSADLLGTTFSAPHLATGFGAHLAIPILRRLFPEEKPVEEITKEEAVNALKEC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGFT 229
++VL YRD +++K +A IT+EG + + + K W F
Sbjct: 209 LKVLWYRDARSLDKFSLAVITKEGVEMHEDQKIEKQSWAFA 249
>gi|358395880|gb|EHK45267.1| hypothetical protein TRIATDRAFT_38957 [Trichoderma atroviride IMI
206040]
Length = 261
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 141/224 (62%), Gaps = 8/224 (3%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P Q TQ P VTGTSV+ +K+KDG+++AAD SYGS R+ V+R++P S+LG S
Sbjct: 27 NGPKQNTQQPIVTGTSVIGIKFKDGVVIAADNLASYGSLARFTDVKRLRPFAGSSILGFS 86
Query: 74 GEISDFQELLRNLDELILYDNMWD-DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
G+ISD Q L R+L EL L + D L LH YL++++YNRR+KFDPLWN L++G
Sbjct: 87 GDISDMQYLDRHLTELSLSEAYESPDKPRLNAANLHRYLSKLLYNRRSKFDPLWNHLLVG 146
Query: 133 GV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLL 186
G+ NG+ +L ++G + +ATGFG LA+PI+R +E + LS E+ V ++
Sbjct: 147 GLDDNGEPFLAAADLLGSTYSAPSLATGFGAMLAQPIMRRYVPDEESAKKLSREEAVDIV 206
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
++ M+VL YRD +++ +A +T++G + + L+ W F
Sbjct: 207 KEAMKVLFYRDARSMSTYSLAVVTKDGVELKEDEKLENQSWAFA 250
>gi|429855224|gb|ELA30192.1| proteasome component pre4 [Colletotrichum gloeosporioides Nara gc5]
Length = 263
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 141/229 (61%), Gaps = 10/229 (4%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
+ PN P Q TQ P VTGTSV+A+K+K+G+++AAD SYGS R+ V+R++ +++
Sbjct: 24 MNPNGPNQATQAPIVTGTSVIAIKFKEGVVIAADNLASYGSLARFTDVKRLRKFADSTVV 83
Query: 71 GASGEISDFQELLRNLDELIL---YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
G G++SD Q L R+L L + YD D L LH YL+++MY RR+ FDPLWN
Sbjct: 84 GFGGDVSDMQFLDRHLQSLDIEESYDLSTDQAPRLNAANLHKYLSKLMYKRRSDFDPLWN 143
Query: 128 SLVLGGVKN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYED 181
L++ G+ + G+ +L ++G F +ATGFG+ LA+PI+R DE NL+ +
Sbjct: 144 HLLVAGLDDAGKPFLAAADLLGTTFTSPSLATGFGSALAQPIMRRYVPDDEAAANLTKDK 203
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGFT 229
++++++CM+VL YRD +++ IA +T++G + + L K W F
Sbjct: 204 AIEVIKECMKVLFYRDARSLDSYSIAVVTKDGVDLKENEKLEKQSWKFA 252
>gi|344233760|gb|EGV65630.1| proteasome endopeptidase complex, beta subunit [Candida tenuis ATCC
10573]
Length = 270
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 137/209 (65%), Gaps = 12/209 (5%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P +T TSV+ +KYKDGI+MAAD GSYGS +R+ ++ER+ +GK +++G SG+
Sbjct: 37 PKMNTQNPIITSTSVLGIKYKDGIVMAADNLGSYGSLLRFNNIERLIKVGKETVVGVSGD 96
Query: 76 ISDFQELLRNLDEL----ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISDFQ+L R LDEL +YDN D N+L +H +L+RV+YNRR+K +PLWNS+++
Sbjct: 97 ISDFQQLQRILDELETEQEVYDNFGD--NNLRAPHVHEFLSRVLYNRRSKMNPLWNSVIV 154
Query: 132 GGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKL 185
G + + +L + M+GV + S +ATGFG++LA P+LR D+ + N+S E+ K+
Sbjct: 155 AGFNDDRSPFLKYIDMLGVTYGASTLATGFGSYLAVPLLRKVIPEDKDYVNVSEEEAKKV 214
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEGT 214
+ MRVL YRD + + + EG
Sbjct: 215 IMDSMRVLFYRDARSAETFTLVTLNSEGV 243
>gi|358388830|gb|EHK26423.1| hypothetical protein TRIVIDRAFT_86444 [Trichoderma virens Gv29-8]
Length = 261
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 141/224 (62%), Gaps = 8/224 (3%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P Q TQ P VTGTSV+ +K+KDG++MAAD SYGS R+ V+R++P S+LG S
Sbjct: 27 NGPKQNTQQPIVTGTSVIGIKFKDGVVMAADNLASYGSLARFTDVKRLRPFADSSILGFS 86
Query: 74 GEISDFQELLRNLDELILYDNMWD-DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
G+ISD Q L R+L +L L + D L LH YL++++YNRR+KFDPLWN L++G
Sbjct: 87 GDISDMQYLDRHLIDLSLSEAYESPDKPRLNAANLHRYLSKLLYNRRSKFDPLWNHLLVG 146
Query: 133 GV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLL 186
G+ NG+ +L ++G + +ATGFG LA+PI+R +E + LS E+ + ++
Sbjct: 147 GLDDNGEPFLAAADLLGSTYSAPSLATGFGAMLAQPIMRRYVPDEESAKKLSREEAINIV 206
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK-TFWGFT 229
++ M+VL YRD +++ +A +T++G + + L+ W F
Sbjct: 207 KEAMKVLFYRDARSLDSYSLAVVTKDGVELKEDEKLEDQSWAFA 250
>gi|342876162|gb|EGU77820.1| hypothetical protein FOXB_11684 [Fusarium oxysporum Fo5176]
Length = 261
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 142/225 (63%), Gaps = 10/225 (4%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P Q TQ P VTGTSV+A+K+KDG++MAAD SYGS R+ V+R++ + S++G S
Sbjct: 27 NGPKQNTQQPIVTGTSVIAVKFKDGVVMAADNLASYGSLARFTDVKRLRSFAESSVVGFS 86
Query: 74 GEISDFQELLRNLDELILYDNMWD--DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
G+ISD Q L R+L +L L D + D L LH YL +++Y RR+KFDPLWN L++
Sbjct: 87 GDISDMQYLDRHLIDLSL-DEAYTSPDAPRLNAANLHRYLAKLLYRRRSKFDPLWNHLLV 145
Query: 132 GGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKL 185
G+ + K +L ++G + +ATGFG+ LA+PI+R +E +NL E+ +K+
Sbjct: 146 AGLDDDDKPFLAAADLLGSTYSAPSLATGFGSMLAQPIMRRHVPDEEAAQNLEKEEAIKI 205
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
+++CM+VL YRD +++ +A +T+EG ++ L+ W F
Sbjct: 206 IKECMKVLYYRDARSLDSYSMAVVTKEGVELTDGLQLEAQSWAFA 250
>gi|146423345|ref|XP_001487602.1| hypothetical protein PGUG_00979 [Meyerozyma guilliermondii ATCC
6260]
Length = 273
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 86/204 (42%), Positives = 139/204 (68%), Gaps = 8/204 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P +Q P +TGTSV ++K+KDG+++AAD GSYGS +R+ ++ERI +GK +++G SG+
Sbjct: 39 PKMNSQQPIITGTSVNSIKFKDGVIVAADNMGSYGSLLRFNNIERIFKVGKETVVGVSGD 98
Query: 76 ISDFQELLRNLDELILYDNMWDD--GNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
ISDFQ++ R LDEL + + ++D+ G++L +H YLTRV+YNRR+K DPLWN++V+ G
Sbjct: 99 ISDFQQIQRLLDELEITEEIYDNDGGHNLRAPNVHEYLTRVLYNRRSKMDPLWNAVVVAG 158
Query: 134 VKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLE 187
+ + +L V ++GV + S + TGFG HLA P+LR D+ ++N++ E + +
Sbjct: 159 FNDDKTPFLRYVDLLGVTYGLSAICTGFGAHLAIPLLRQLVPDDKDYQNVTEEQAREAII 218
Query: 188 KCMRVLLYRDRSAVNKLQIAKITE 211
CM+VL YRD + +K + + +
Sbjct: 219 NCMKVLFYRDARSSDKFTLVTLKQ 242
>gi|345560614|gb|EGX43739.1| hypothetical protein AOL_s00215g475 [Arthrobotrys oligospora ATCC
24927]
Length = 320
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/222 (43%), Positives = 137/222 (61%), Gaps = 7/222 (3%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
+ PI TQ P VTGTSV+ +K+KDG+++AAD SYGS RY +VER+ +G H+++GA
Sbjct: 87 SQPITHTQRPIVTGTSVLGVKFKDGVIIAADNIASYGSLARYDNVERLLQVGTHTVVGAG 146
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
G+ISD Q L LD L++ + D + L ++H+Y++RV+Y RRNKFDPLWNS++ G
Sbjct: 147 GDISDMQYLHLLLDNLLIKEQYPADDHQLYAPQVHTYISRVLYQRRNKFDPLWNSILTAG 206
Query: 134 V--KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLL 186
K + +L V + G + +ATG+G HLA PILR +E NL+ ED KL+
Sbjct: 207 ADPKTSEPFLSYVDLKGTTYSAPALATGYGAHLAIPILRRHVADEEAVSNLTQEDAQKLV 266
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
E+CM+VL YRD + K A IT++G T W F
Sbjct: 267 EECMKVLWYRDARSGVKYSWAIITKDGVTTGSKEIENQSWKF 308
>gi|300176555|emb|CBK24220.2| unnamed protein product [Blastocystis hominis]
Length = 227
Score = 176 bits (446), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 135/211 (63%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P++RT P VTG++V+A+KY+DG++M D SYGS +K+V+R+ + + ++G GE
Sbjct: 15 PMKRTTDPIVTGSTVLAMKYRDGVMMCTDTLASYGSMSMFKNVQRMYVLKNNVIIGFDGE 74
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
SDF ++ L++++ DD + L ++L +YN+R K +PLWN++V+ G++
Sbjct: 75 YSDFAHIVEELEKILDESIFQDDNSMLTAASTFNFLRAWLYNQRTKMEPLWNTIVVIGLE 134
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLY 195
N + +LG+V +G +E++ AT FG + P+LR + E+++ E+ LE+C RV Y
Sbjct: 135 NQKPFLGIVDKLGAAYEENFTATSFGLYFCLPLLRSLYREDMTEEEARATLEECARVGYY 194
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
R+ A N++Q+AK+T EG IS PY L+T W
Sbjct: 195 RNCYASNRIQMAKVTNEGCVISDPYVLETRW 225
>gi|398395243|ref|XP_003851080.1| proteasome core particle subunit beta 7 [Zymoseptoria tritici
IPO323]
gi|339470959|gb|EGP86056.1| hypothetical protein MYCGRDRAFT_74168 [Zymoseptoria tritici IPO323]
Length = 278
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 98/233 (42%), Positives = 139/233 (59%), Gaps = 16/233 (6%)
Query: 12 GPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLG 71
G PI TQ P VTGTSV+ALK+ G+++AAD SYGS R+ V R+KP + S++G
Sbjct: 34 GTQQPITHTQSPIVTGTSVIALKFSSGVVIAADNLASYGSLARFTDVHRLKPFNRKSVVG 93
Query: 72 ASGEISDFQELLRNLDELILYDNM--------WDDGNSL-GPKELHSYLTRVMYNRRNKF 122
G++SD Q L R L+ L + +N +DG++L K LH+YL +VMY RR F
Sbjct: 94 FGGDVSDMQYLDRLLNSLDVEENYSVGAAAADSEDGDALMSAKNLHTYLAKVMYKRRTDF 153
Query: 123 DPLWNSLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR----DEWHEN- 176
+PLWN+L++ G+ K +L ++G F +ATGFG HLA+PILR DE +
Sbjct: 154 NPLWNALLVAGLDEKNKPFLASADLLGTTFSAPTLATGFGAHLAQPILRRAVPDEAAASK 213
Query: 177 LSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
LS ED V ++ CM+VL YRD ++N+ IA I E+G + + L+ W F
Sbjct: 214 LSREDAVAAVKACMKVLFYRDARSMNEYSIAVIDEKGVELHENEKLENQSWDF 266
>gi|344301806|gb|EGW32111.1| hypothetical protein SPAPADRAFT_61193 [Spathaspora passalidarum
NRRL Y-27907]
Length = 279
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 139/211 (65%), Gaps = 10/211 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P +TGTSV+A K+ +GI+MAAD GSYGS +R+ ++ER+ +G +++G SG+
Sbjct: 41 PKMHTQQPIITGTSVIASKFNNGIIMAADNVGSYGSLLRFSNIERLIKVGSETVVGLSGD 100
Query: 76 ISDFQELLRNLDELILYDNMWDD--GNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
+SD Q++ R LDEL + ++D+ G+ L +H YL+RVMYNRR+K +PLWNS+++GG
Sbjct: 101 VSDMQQIERILDELETSEEVYDNDGGDYLRAANVHEYLSRVMYNRRSKMNPLWNSIIVGG 160
Query: 134 V-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSY-----EDGVKLLE 187
++ +L V ++GV + S +ATGFG+HLA P+LR+ E+ Y + K++E
Sbjct: 161 FYRDRTPFLKYVDLVGVTYSSSTIATGFGSHLAIPLLRNLIPEDKDYVKVDEQQITKVVE 220
Query: 188 KCMRVLLYRDRSAVNKLQ--IAKITEEGTTI 216
MRVL YRD + +K I K+ EEG +
Sbjct: 221 DSMRVLFYRDARSGDKYSQVIIKLDEEGKVV 251
>gi|302922263|ref|XP_003053429.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734370|gb|EEU47716.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 261
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 140/228 (61%), Gaps = 10/228 (4%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
+G N P Q TQ P VTGTSV+A+K+KDG++MAAD SYGS R+ V+R++ S++
Sbjct: 24 MGDNGPKQNTQQPIVTGTSVIAVKFKDGVVMAADNLASYGSLARFTDVKRLRSFADSSVV 83
Query: 71 GASGEISDFQELLRNLDELILYDNMWD--DGNSLGPKELHSYLTRVMYNRRNKFDPLWNS 128
G SG+ISD Q L R+L EL L D + D L LH YL +++Y RR+KFDPLWN
Sbjct: 84 GFSGDISDMQYLDRHLIELSL-DEAYTSPDAPRLNAANLHRYLAKLLYRRRSKFDPLWNH 142
Query: 129 LVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDG 182
L++ G+ + K +L ++G + +ATGFG LA+PI+R +E +NL +
Sbjct: 143 LLVAGLDDDDKPFLAAADLLGSTYSSPSLATGFGAMLAQPIMRRHVPDEEAAQNLDKDGA 202
Query: 183 VKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
V ++++CM+VL YRD +++ +A +T++G I+ L+ W F
Sbjct: 203 VDIIKECMKVLFYRDARSLDSYSLAIVTKDGVEITNDLKLEAQSWAFA 250
>gi|322697964|gb|EFY89738.1| 20S proteasome subunit [Metarhizium acridum CQMa 102]
Length = 261
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 90/225 (40%), Positives = 140/225 (62%), Gaps = 12/225 (5%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P TQ P VTGTSV+A+K+KDG++MAAD SYGS R+ V+R++P S++G S
Sbjct: 27 NGPTTHTQQPIVTGTSVIAIKFKDGVVMAADNLASYGSLARFTDVKRLRPFADASVVGFS 86
Query: 74 GEISDFQELLRNLDELIL---YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
G+ISD Q L R+L +L L YD+ D L LH YL++++Y RR+KFDPLWN L+
Sbjct: 87 GDISDMQYLDRHLTDLALTEAYDS--PDSARLNASNLHRYLSKLLYRRRSKFDPLWNHLL 144
Query: 131 LGGVKN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVK 184
+ G+ + G +L ++G + +ATGFG LA+P++R +E L+ E+ V
Sbjct: 145 VAGLDDKGTPFLAAADLLGTTYSAPSLATGFGAMLAQPVMRRYAPDEESAAKLTREEAVD 204
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK-TFWGF 228
++++CM+VL YRD +++ +A +T++G + + L+ W F
Sbjct: 205 IIKECMKVLFYRDARSLDSYSLAIVTKDGVELRENQKLEDQSWAF 249
>gi|91694273|gb|ABE41788.1| 20S proteasome subunit [Trichoderma harzianum]
Length = 261
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/224 (41%), Positives = 140/224 (62%), Gaps = 8/224 (3%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P Q TQ P VTGTSV+ +K+KDG++MAAD SYGS R+ V+R++ S++G S
Sbjct: 27 NGPKQNTQQPIVTGTSVIGIKFKDGVVMAADNLASYGSLARFTDVKRLRTFADSSIVGFS 86
Query: 74 GEISDFQELLRNLDELILYDNMWD-DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
G+ISD Q L R+L +L L + D L LH YL++++YNRR+KFDPLWN L++G
Sbjct: 87 GDISDMQYLDRHLIDLSLSEAYESPDKPRLNAANLHRYLSKLLYNRRSKFDPLWNHLLIG 146
Query: 133 GV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLL 186
G+ NG+ +L ++G + +ATGFG LA+PI+R +E + LS E+ + ++
Sbjct: 147 GLDDNGEPFLAAADLLGSTYSAPSLATGFGAMLAQPIMRRYVPDEESAKKLSREEAINIV 206
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK-TFWGFT 229
++ M+VL YRD +++ +A +T+EG + Q L+ W F
Sbjct: 207 KEAMKVLFYRDARSLDSYSLAVVTKEGVELKQDEKLEDQSWAFA 250
>gi|340517515|gb|EGR47759.1| proteasome, subunit beta 4 [Trichoderma reesei QM6a]
Length = 261
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/224 (41%), Positives = 141/224 (62%), Gaps = 8/224 (3%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P Q TQ P VTGTSVV +K+KDG++MAAD SYGS R+ V+R++P S+LG S
Sbjct: 27 NGPKQNTQQPIVTGTSVVGIKFKDGVVMAADNLASYGSLARFTDVKRLRPFAGTSILGFS 86
Query: 74 GEISDFQELLRNLDELILYDNMWD-DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
G+ISD Q L R+L +L L + D L LH YL +++Y+RR+KFDPLWN L++G
Sbjct: 87 GDISDMQYLDRHLIDLSLSEAYESPDKPRLSAANLHRYLAKLLYSRRSKFDPLWNHLLVG 146
Query: 133 GVKN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLL 186
G+ + G+ +L ++G + +ATGFG LA+PI+R +E +NLS E+ V ++
Sbjct: 147 GLDDAGEPFLAAADLLGSTYSAPSLATGFGAMLAQPIMRRYVPDEESAKNLSREEAVNIV 206
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK-TFWGFT 229
++ M+VL YRD +++ +A +T++G + + L+ W F
Sbjct: 207 KEAMKVLFYRDARSLDSYSLAVVTKDGVELKENEKLEDQSWAFA 250
>gi|196004606|ref|XP_002112170.1| hypothetical protein TRIADDRAFT_23895 [Trichoplax adhaerens]
gi|190586069|gb|EDV26137.1| hypothetical protein TRIADDRAFT_23895 [Trichoplax adhaerens]
Length = 259
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 139/220 (63%), Gaps = 4/220 (1%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+ + + G+++AAD GSYGS R++ + R+ + + +GASG+
Sbjct: 36 PRTYTQQPIVTGTSVLGVTFTGGVVIAADTLGSYGSLARFRDISRLLKVNEKVAIGASGD 95
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV- 134
+DFQ + +++ +L +D P +H++LTR++YNRR K +PLWN++++GG
Sbjct: 96 YADFQFIRDIINQKVLDGKCLNDNYCYSPVAIHTWLTRILYNRRTKINPLWNNIIVGGYD 155
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEW---HENLSYEDGVKLLEKCMR 191
+N YLG V +GV ++ +ATG+G+++A+P+LR + + N + E + +E+CMR
Sbjct: 156 ENEGSYLGYVDKLGVAYQAPTIATGYGSYIAQPLLRQSYESNNNNFTEEQALSAIERCMR 215
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAF 231
VLLYRD + N+ ++A IT++G ++ P + T W +
Sbjct: 216 VLLYRDGRSGNQYEVAIITKDGCQVTSPKPISTNWDIAEY 255
>gi|396457900|ref|XP_003833563.1| similar to proteasome subunit beta type-4 [Leptosphaeria maculans
JN3]
gi|312210111|emb|CBX90198.1| similar to proteasome subunit beta type-4 [Leptosphaeria maculans
JN3]
Length = 276
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/225 (41%), Positives = 137/225 (60%), Gaps = 10/225 (4%)
Query: 12 GPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLG 71
GPN Q TQ P VTGTSV+A K+ DG+++AAD SYGS R+ V+R++ ++G
Sbjct: 44 GPN---QHTQSPIVTGTSVLAAKFNDGVVIAADNLASYGSLARFTDVKRLRKFNDEVVVG 100
Query: 72 ASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
G++SD Q L R L+ L + +N + L K LH+YL +VMYNRR+KFDPLWN L++
Sbjct: 101 FGGDVSDMQYLDRLLNSLDIRENYSSSESQLNAKNLHTYLAKVMYNRRSKFDPLWNHLLI 160
Query: 132 GGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR----DEWH-ENLSYEDGVKL 185
G+ K +L ++G F +ATGFG HLA+PILR DE ++ E V+
Sbjct: 161 VGMDGESKPFLASADLLGTTFSSPSLATGFGAHLAQPILRTILPDEAAVAKVTKEQAVEK 220
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
+++CM+VL YRD +++K IA +T+EG + + L+ W F
Sbjct: 221 IKECMKVLFYRDARSMDKYSIAVVTKEGVELDEDVKLENQSWAFA 265
>gi|322705602|gb|EFY97186.1| 20S proteasome subunit [Metarhizium anisopliae ARSEF 23]
Length = 261
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/230 (38%), Positives = 141/230 (61%), Gaps = 12/230 (5%)
Query: 10 LVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSL 69
+ N P TQ P VTGTSV+A+K+KDG+++AAD SYGS R+ V+R++P S+
Sbjct: 23 FMNSNGPTAHTQQPIVTGTSVIAIKFKDGVVIAADNLASYGSLARFTDVKRLRPFADASV 82
Query: 70 LGASGEISDFQELLRNLDELIL---YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLW 126
+G SG+ISD Q L R+L +L L YD+ D L LH YL++++Y RR+KFDPLW
Sbjct: 83 VGFSGDISDMQYLDRHLTDLALTEAYDS--PDSARLNASNLHRYLSKLLYRRRSKFDPLW 140
Query: 127 NSLVLGGVKN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYE 180
N L++ G+ + G +L ++G + +ATGFG LA+P++R +E L+ E
Sbjct: 141 NHLLVAGLDDKGAPFLAAADLLGTTYSAPSLATGFGAMLAQPVMRRYAPDEESAAKLTRE 200
Query: 181 DGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK-TFWGFT 229
+ V ++++CM+VL YRD +++ +A +T++G + + L+ W F
Sbjct: 201 EAVDIIKECMKVLFYRDARSLDSYSLAIVTKDGVELKENQKLEDQSWAFA 250
>gi|327304495|ref|XP_003236939.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
gi|326459937|gb|EGD85390.1| proteasome subunit beta [Trichophyton rubrum CBS 118892]
Length = 261
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/222 (40%), Positives = 142/222 (63%), Gaps = 8/222 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI TQ P VTGTSV+A+K+KDG+++A+D GSYGS R+ ++R++ S++G G+
Sbjct: 29 PITHTQRPIVTGTSVIAVKFKDGVVIASDNLGSYGSLARFTDLKRLRAFDNSSVVGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDG-NSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+SD Q + R L+ L + +N G +SL K LH+YL++++Y RR+KFDPLWN +++ G+
Sbjct: 89 VSDMQYIDRVLNSLDIQENYSTYGEHSLNAKNLHTYLSKLLYQRRSKFDPLWNHILVAGL 148
Query: 135 KN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE-----NLSYEDGVKLLEK 188
+ G+ +L ++G + +ATGFG HLA PILR + E N++ E V +++
Sbjct: 149 DDEGKPFLSSADLLGTTYSAPALATGFGAHLAVPILRRLFPEEDGIDNITKERAVDAMKQ 208
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
CMRVL YRD + ++ IA +T++G + + AL+ W F
Sbjct: 209 CMRVLFYRDARSSDRYSIAVVTKDGVELKENEALENQSWAFA 250
>gi|46108636|ref|XP_381376.1| hypothetical protein FG01200.1 [Gibberella zeae PH-1]
gi|408398899|gb|EKJ78025.1| hypothetical protein FPSE_01813 [Fusarium pseudograminearum CS3096]
Length = 261
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/225 (40%), Positives = 140/225 (62%), Gaps = 10/225 (4%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P Q TQ P VTGTSV+A+K+KDG+++AAD SYGS R+ V+R++P S++G S
Sbjct: 27 NGPKQNTQQPIVTGTSVIAVKFKDGVVIAADNLASYGSLARFTDVKRLRPFADSSVVGFS 86
Query: 74 GEISDFQELLRNLDELILYDNMWD--DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
G+ISD Q L R+L EL L D + D L LH YL +++Y RR+KFDPLWN +++
Sbjct: 87 GDISDMQYLDRHLIELSL-DEAYTSPDAPRLNAANLHRYLAKLLYRRRSKFDPLWNHILV 145
Query: 132 GGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKL 185
G+ + K +L ++G + +ATGFG LA+PI+R +E +NL E + +
Sbjct: 146 VGLDDDDKPFLAAADLLGSTYSAPSLATGFGAMLAQPIMRRHVPDEEASQNLDKEGAINI 205
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
+++CM+VL YRD +++ +A +T+EG I++ L+ W F
Sbjct: 206 IKECMKVLYYRDARSLDSYSMAVVTKEGVEINEGLQLEAQSWAFA 250
>gi|213409730|ref|XP_002175635.1| 20S proteasome component beta 7 [Schizosaccharomyces japonicus
yFS275]
gi|212003682|gb|EEB09342.1| 20S proteasome component beta 7 [Schizosaccharomyces japonicus
yFS275]
Length = 264
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 132/223 (59%), Gaps = 8/223 (3%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+ TQ P VTG+SV+ALK+ G+++AAD SYGS +R+ ER+ +G ++++G G+I
Sbjct: 35 VSHTQSPIVTGSSVLALKFNGGVMIAADNLASYGSLMRFYDEERLTKVGNNTVVGVGGDI 94
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK- 135
SD+Q + LD+L + + +DG++L P +H YL R+ Y RR+K DPLWN ++ GV
Sbjct: 95 SDYQHIQHILDKLEIKEQYNNDGHALEPSHVHEYLARLFYYRRSKMDPLWNQAIVAGVDG 154
Query: 136 -NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
N + Y+ + G + +ATGF HL P+LR D+W ++L+ E +++ C
Sbjct: 155 PNKEPYIAFADLRGTTYTSEAIATGFAAHLGMPLLRKVTEDDKW-KSLTKEQARAVIDDC 213
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQ 232
MRVL YRD ++NK +A IT EG + + W F Q
Sbjct: 214 MRVLFYRDAGSLNKFSVATITAEGIEFLTNQKVSSNWAFAEKQ 256
>gi|326472773|gb|EGD96782.1| proteasome subunit beta [Trichophyton tonsurans CBS 112818]
gi|326484953|gb|EGE08963.1| proteasome component Pre4 [Trichophyton equinum CBS 127.97]
Length = 261
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 141/221 (63%), Gaps = 8/221 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+KDG+++A+D GSYGS R+ ++R++ S++G G+
Sbjct: 29 PTTHTQRPIVTGTSVIAVKFKDGVVIASDNLGSYGSLARFTDLKRLRAFDNSSVVGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDG-NSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+SD Q + R L+ L + +N G +SL K LH+YL++++Y RR+KFDPLWN +++ G+
Sbjct: 89 VSDMQYIDRVLNSLDIQENYSTYGEHSLNAKNLHTYLSKLLYQRRSKFDPLWNHILVAGL 148
Query: 135 KN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE-----NLSYEDGVKLLEK 188
+ G+ +L ++G + +ATGFG HLA PILR + E N++ E V +++
Sbjct: 149 DDEGKPFLSSADLLGTTYSAPALATGFGAHLAVPILRRLFPEEDGIDNITKERAVDAMKQ 208
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
CMRVL YRD + ++ IA +T+EG + + AL+ W F
Sbjct: 209 CMRVLFYRDARSSDRYSIAVVTKEGVELKENEALENQSWAF 249
>gi|145255853|ref|XP_001399121.1| proteasome subunit beta type-4 [Aspergillus niger CBS 513.88]
gi|134084718|emb|CAK43375.1| unnamed protein product [Aspergillus niger]
Length = 260
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 137/221 (61%), Gaps = 7/221 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSVVA+K+ G+ +AAD SYGS R+ V+R++ G +++G SG+
Sbjct: 29 PKTHTQSPAVTGTSVVAVKFNGGVAIAADNLASYGSLARFADVKRLRKFGDSAIIGFSGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L+ + + +N GN+L K LH+YL++V Y RR++F+PLWN +++ G
Sbjct: 89 VSDMQYIDRLLESIDIRENYSTHGNTLNAKNLHTYLSKVFYKRRSEFNPLWNHILVAGFD 148
Query: 136 NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
+K +L ++G F H+ATGFG HLA PILR + E+++ ++ V L +C
Sbjct: 149 GDKKPFLSSADLLGTTFSAPHLATGFGAHLAVPILRRLFPEERPLESITKDEAVAALREC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
++VL YRD +++K +A ITEEG I + ++ W F
Sbjct: 209 IKVLWYRDARSLDKYSLAVITEEGVEIQEDQQVEAQSWAFA 249
>gi|350630870|gb|EHA19242.1| hypothetical protein ASPNIDRAFT_43045 [Aspergillus niger ATCC 1015]
Length = 260
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/221 (39%), Positives = 137/221 (61%), Gaps = 7/221 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSVVA+K+ G+ +AAD SYGS R+ V+R++ G +++G SG+
Sbjct: 29 PKTHTQSPAVTGTSVVAVKFNGGVAIAADNLASYGSLARFTDVKRLRKFGDSAIIGFSGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L+ + + +N GN+L K LH+YL++V Y RR++F+PLWN +++ G
Sbjct: 89 VSDMQYIDRLLESIDIRENYSTHGNTLNAKNLHTYLSKVFYKRRSEFNPLWNHILVAGFD 148
Query: 136 NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
+K +L ++G F H+ATGFG HLA PILR + E+++ ++ V L +C
Sbjct: 149 GDKKPFLSSADLLGTTFSAPHLATGFGAHLAVPILRRLFPEERPLESITKDEAVAALREC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
++VL YRD +++K +A ITEEG I + ++ W F
Sbjct: 209 IKVLWYRDARSLDKYSLAVITEEGVEIQEDQQVEAQSWAFA 249
>gi|358373507|dbj|GAA90105.1| proteasome component Pre4 [Aspergillus kawachii IFO 4308]
Length = 260
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 137/220 (62%), Gaps = 7/220 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSVVA+K+ G+ +AAD SYGS R+ V+R++ G +++G SG+
Sbjct: 29 PKTHTQSPAVTGTSVVAVKFNGGVAIAADNLASYGSLARFTDVKRLRKFGDSAIIGFSGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L+ + + +N GN+L K LH+YL++V Y RR++F+PLWN +++ G
Sbjct: 89 VSDMQYIDRLLESIDIRENYSTHGNTLNAKNLHTYLSKVFYKRRSEFNPLWNHVLVAGFD 148
Query: 136 NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
+K +L ++G F H+ATGFG HLA PILR + E+++ ++ V L +C
Sbjct: 149 GDKKPFLSSADLLGTTFSAPHLATGFGAHLAVPILRRLFPEERPIESITKDEAVAALREC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
++VL YRD +++K +A ITEEG I + ++ W F
Sbjct: 209 IKVLWYRDARSLDKYSLAVITEEGVEIQEDQQVEAQSWAF 248
>gi|50424791|ref|XP_460985.1| DEHA2F14322p [Debaryomyces hansenii CBS767]
gi|49656654|emb|CAG89345.1| DEHA2F14322p [Debaryomyces hansenii CBS767]
Length = 275
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/208 (44%), Positives = 136/208 (65%), Gaps = 12/208 (5%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P TQ P +TGTSVV+LK+KDGI+MAAD GSYGS +R+ ++ER+ +GK +++G S
Sbjct: 39 NFPKMNTQQPIITGTSVVSLKFKDGIIMAADNLGSYGSLLRFTNMERLLRVGKETIVGVS 98
Query: 74 GEISDFQE----LLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
G+ISD Q+ L +YDN D G++L +H YL++V+YNRR+K +PLWN+L
Sbjct: 99 GDISDMQQLERLLEELETTEEVYDN--DGGHNLRAPHVHEYLSKVLYNRRSKMNPLWNAL 156
Query: 130 VLGGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGV 183
V+GG +G +L V ++GV + S ++TGFG+HLA P+LR D +EN++ E
Sbjct: 157 VVGGFNDDGTPFLRYVDLLGVTYGSSAISTGFGSHLAVPLLRQLVPKDPDYENVTEEQAR 216
Query: 184 KLLEKCMRVLLYRDRSAVNKLQIAKITE 211
+ CMRVL YRD +++K + I +
Sbjct: 217 DAILNCMRVLFYRDARSLDKFSLVTIKK 244
>gi|332375913|gb|AEE63097.1| unknown [Dendroctonus ponderosae]
Length = 232
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 86/218 (39%), Positives = 131/218 (60%), Gaps = 3/218 (1%)
Query: 12 GPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLG 71
GP++ Q +Q P T TS+VAL Y +GI++A D+ SYGS RY + RI I + LL
Sbjct: 6 GPSNFKQFSQGPVTTSTSLVALTYNNGIVVAGDLLASYGSLARYSNCPRIVKINNNLLLA 65
Query: 72 ASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ASG+ +DFQ + +++ ++ + DDG SL PK L+ +LTRV+YNRR++ DPLWN+ ++
Sbjct: 66 ASGDYADFQFVKNLVEQKVISEECLDDGLSLKPKALYCWLTRVLYNRRSQMDPLWNNFII 125
Query: 132 GGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKC 189
G+++G+ +LG V G +ED + TG+G H+A P+LRD + L + + +C
Sbjct: 126 AGIQDGEPFLGTVDKQGTAYEDKAICTGYGAHIATPLLRDVLDKTSQLDMAEARAQVARC 185
Query: 190 MRVLLYRDRSAVNKLQIAKI-TEEGTTISQPYALKTFW 226
M VL YRD +K Q + +G I P A+ W
Sbjct: 186 MEVLYYRDARGYDKYQQGTVDVNQGVEIQSPLAVTHSW 223
>gi|156056673|ref|XP_001594260.1| hypothetical protein SS1G_04067 [Sclerotinia sclerotiorum 1980]
gi|154701853|gb|EDO01592.1| hypothetical protein SS1G_04067 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 260
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 136/223 (60%), Gaps = 7/223 (3%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P Q TQ P VTGTSVVALK+KDG+++AAD SYGS R+ V+R++ S++G
Sbjct: 27 NGPNQHTQSPIVTGTSVVALKFKDGVVIAADNLASYGSLARFTDVKRLRKFADTSVVGFG 86
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
G++SD Q L R L L + G++L + LH YL++V+Y RR+ F+PLWN+L++ G
Sbjct: 87 GDVSDMQYLDRLLQSLDTEEAYSASGHTLNARNLHKYLSKVLYKRRSDFNPLWNTLLVAG 146
Query: 134 VKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLE 187
+ K +L ++G F +ATGFG HLA+P+LR +E L+ E ++ ++
Sbjct: 147 LDEHDKPFLASADLLGTTFSSPSLATGFGAHLAQPLLRKVAPDEEATAKLTKEAALEAIK 206
Query: 188 KCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGFT 229
+ M+VL YRD +++K IA IT+EG + + L K W F
Sbjct: 207 ESMKVLFYRDARSMDKYSIAVITKEGIDLKENEQLEKQSWAFA 249
>gi|425770055|gb|EKV08530.1| Proteasome subunit beta type [Penicillium digitatum Pd1]
gi|425771747|gb|EKV10184.1| Proteasome subunit beta type [Penicillium digitatum PHI26]
Length = 260
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 134/221 (60%), Gaps = 7/221 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P T P VTGTSVVA+K+ G+++A D SYGS R+ V+R++ G +++G G+
Sbjct: 29 PKVHTSSPAVTGTSVVAVKFNGGVVIATDNLASYGSLARFSDVKRLRKFGDKAIVGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV- 134
+SD Q L R LD + + +N GN L K LH+YL +V Y RR++F+PLWN +++ G
Sbjct: 89 VSDMQYLDRLLDSMDIKENYSPHGNMLNAKNLHTYLAKVFYKRRSEFNPLWNHVLVAGFD 148
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-----ENLSYEDGVKLLEKC 189
G+ +L ++G F H+ATGFG HLA PILR ++ E +S ED ++ L++C
Sbjct: 149 AQGEPFLSSADLLGTTFSAPHLATGFGAHLAVPILRRKFPEGTPLEQVSKEDAIEALKEC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK-TFWGFT 229
++VL YRD + +K IA IT++G + + ++ W F
Sbjct: 209 LKVLFYRDARSTDKYSIAVITKDGIDLKEDEQIQGQSWAFA 249
>gi|315045598|ref|XP_003172174.1| hypothetical protein MGYG_09061 [Arthroderma gypseum CBS 118893]
gi|311342560|gb|EFR01763.1| hypothetical protein MGYG_09061 [Arthroderma gypseum CBS 118893]
Length = 261
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 140/221 (63%), Gaps = 8/221 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+ +K+KDG+++A+D GSYGS R+ ++R++ S++G G+
Sbjct: 29 PTTHTQRPIVTGTSVIGVKFKDGVVIASDNLGSYGSLARFTDLKRLRAFDNSSVVGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDG-NSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
ISD Q + R L+ L + +N G +SL K LH+YL++++Y RR+KFDPLWN +++ G+
Sbjct: 89 ISDMQYIDRVLNTLDIQENYSTYGEHSLNAKNLHTYLSKLLYQRRSKFDPLWNHILVAGL 148
Query: 135 KN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE-----NLSYEDGVKLLEK 188
+ G+ +L ++G + +ATGFG HLA PILR + E N++ E V +++
Sbjct: 149 DDEGKPFLSSADLLGTTYSAPALATGFGAHLAVPILRRLFPEEDGIDNITKEAAVDAMKQ 208
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
CMRVL YRD + ++ IA +T+EG + + AL+ W F
Sbjct: 209 CMRVLFYRDARSSDRYSIAVVTKEGVDLKEDEALENQSWAF 249
>gi|400598780|gb|EJP66487.1| 20S proteasome subunit [Beauveria bassiana ARSEF 2860]
Length = 263
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 138/228 (60%), Gaps = 10/228 (4%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
V N P TQ P VTGTSV+ +K+KDG+++AAD SYGS R+ V+R+K S++
Sbjct: 24 VQENAPRTHTQQPIVTGTSVIGVKFKDGVIVAADNLASYGSLARFTDVKRLKTFQDTSVV 83
Query: 71 GASGEISDFQELLRNLDELIL---YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
G SG+ISD Q L R+L +L + Y + D L LH YL +++YNRR+KFDPLWN
Sbjct: 84 GFSGDISDMQYLDRHLTDLAIDEAYSSSATDAPRLNAANLHRYLAKLLYNRRSKFDPLWN 143
Query: 128 SLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYED 181
L++ G+ + ++ +L ++G + +ATG+G LA+PI+R DE L ++
Sbjct: 144 HLLVAGLDDDRRPFLAAADLLGTTYSSPSLATGYGAMLAQPIMRRRVPDDEAAATLEKDE 203
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
+ L+++CM+VL YRD +++ IA +T++G +S L+ W F
Sbjct: 204 AIALVQECMKVLFYRDARSLDTYSIAVVTKDGVDVSYNNKLENQSWAF 251
>gi|68470326|ref|XP_720667.1| hypothetical protein CaO19.11705 [Candida albicans SC5314]
gi|46442547|gb|EAL01835.1| hypothetical protein CaO19.11705 [Candida albicans SC5314]
gi|238882622|gb|EEQ46260.1| proteasome component PRE4 [Candida albicans WO-1]
Length = 278
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P TQ P +TGTSV+A K+K+G++MAAD GSYGS +R+ ++ER+ +GK +++G S
Sbjct: 37 NFPKMNTQQPIITGTSVIASKFKNGVIMAADHVGSYGSLLRFNNIERLIKVGKETVVGIS 96
Query: 74 GEISDFQELLRNLDELILYDNMWDD--GNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
G+ISD Q ++R LDEL + + ++D+ G L +H YL+RV+YNRR+K +PLWN++++
Sbjct: 97 GDISDLQYIVRLLDELEIDEEVYDNDGGEYLRAPNVHEYLSRVLYNRRSKMNPLWNAIIV 156
Query: 132 GGV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSY-----EDGVKL 185
GG K+ +L V ++GV + S +ATGFG+HLA P+LR+ E+ Y + K
Sbjct: 157 GGFNKDRTPFLKYVDLLGVTYHASTMATGFGSHLAIPLLRNLIPEDKDYVKVDEQQVSKA 216
Query: 186 LEKCMRVLLYRD-RSAVN-KLQIAKITEEGTTIS 217
+E MRVL YRD RS N + I KI E +S
Sbjct: 217 IEDSMRVLFYRDARSGENYSVVIIKIDENTGELS 250
>gi|452837504|gb|EME39446.1| hypothetical protein DOTSEDRAFT_159750 [Dothistroma septosporum
NZE10]
Length = 275
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/234 (38%), Positives = 135/234 (57%), Gaps = 17/234 (7%)
Query: 12 GPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLG 71
G PI TQ P VTGTSV+ALK+ G+++AAD SYGS R+ V R+KP + S++G
Sbjct: 30 GTQQPISHTQQPIVTGTSVIALKFSTGVVIAADNLASYGSLARFTDVHRLKPFNRKSVVG 89
Query: 72 ASGEISDFQELLRNLDELILYDNMWD----------DGNSLGPKELHSYLTRVMYNRRNK 121
G++SD Q + R L L + +N D + K LH+YL++VMY RR
Sbjct: 90 VGGDVSDMQYIDRLLKALDVEENYSTGSHTAEEEDADPAMMSAKNLHTYLSKVMYKRRTD 149
Query: 122 FDPLWNSLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHE 175
F+PLWN+L++ G+ K ++ ++G F +ATGFG HLA+PILR +E +
Sbjct: 150 FNPLWNALLVAGLDEKNKPFIASADLLGTTFSAPTMATGFGAHLAQPILRRAVPDEETSQ 209
Query: 176 NLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
L+ E V+ ++ CM+VL YRD ++N+ IA I E+G + + L+ W F
Sbjct: 210 KLTREQAVQTVKDCMKVLFYRDARSMNEYSIAVIDEKGVELKEDEKLENQSWDF 263
>gi|154323890|ref|XP_001561259.1| hypothetical protein BC1G_00344 [Botryotinia fuckeliana B05.10]
gi|347829951|emb|CCD45648.1| similar to proteasome subunit beta type-4 [Botryotinia fuckeliana]
Length = 260
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/223 (40%), Positives = 135/223 (60%), Gaps = 7/223 (3%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P Q TQ P VTGTSVVALK+KDG+++AAD SYGS R+ V+R++ S++G
Sbjct: 27 NGPNQHTQSPIVTGTSVVALKFKDGVVIAADNLASYGSLARFTDVKRLRKFADTSVVGFG 86
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
G++SD Q L R L L + G++L LH YL++V+Y RR+ F+PLWN+L++ G
Sbjct: 87 GDVSDMQYLDRLLQSLDTEEAYGASGHTLNAHNLHKYLSKVLYKRRSDFNPLWNTLLVAG 146
Query: 134 VKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLE 187
+ K +L ++G F +ATGFG HLA+P+LR +E L+ E ++ ++
Sbjct: 147 LDEHDKPFLASADLLGTTFSSPSLATGFGAHLAQPLLRKVAPDEEAAAKLTKEAALEAVK 206
Query: 188 KCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGFT 229
+ M+VL YRD +++K IA IT+EG + + L K W F
Sbjct: 207 ESMKVLFYRDARSMDKYSIAVITKEGIDLKENEELEKQSWAFA 249
>gi|355428296|gb|AER92464.1| hypothetical protein [Triatoma rubida]
Length = 258
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/219 (39%), Positives = 136/219 (62%), Gaps = 3/219 (1%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
D +RT P T TSV+ +K+ G+ +AAD+GG YG RYK +ERI + +++ SG
Sbjct: 34 DIYKRTLSPNTTTTSVLGIKFNGGVAIAADIGGYYGKLARYKQLERIYKVNDSTIMCTSG 93
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+ +DFQ + +++ ++ + + +DG SL L++++TR+MY RR+KFDPLWNS+V+ G
Sbjct: 94 DYADFQHIKDTVEQRVISEEILEDGFSLKAFSLYTWMTRLMYGRRSKFDPLWNSVVVAGY 153
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEW--HENLSYEDGVKL-LEKCMR 191
G+ +LG+V + G+ +ED+ VATG G+H+A P LR+ L +D + L KCM
Sbjct: 154 DEGEGFLGVVDLRGLAYEDNCVATGLGSHIALPSLRNSAASASGLFDKDMAHIALTKCME 213
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTA 230
+L YRD ++ K QIA IT++G IS + W A
Sbjct: 214 LLFYRDTCSLPKFQIATITDKGVEISPIIEVSGNWEVAA 252
>gi|85089532|ref|XP_957993.1| hypothetical protein NCU07365 [Neurospora crassa OR74A]
gi|28919293|gb|EAA28757.1| hypothetical protein NCU07365 [Neurospora crassa OR74A]
Length = 268
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/229 (40%), Positives = 137/229 (59%), Gaps = 15/229 (6%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P Q TQ P VTGTSV+A+KYKDG++MAAD SYGS R+ V+R++ S++G SG+
Sbjct: 29 PKQATQAPIVTGTSVIAMKYKDGVVMAADNLASYGSLARFPDVKRLRVFLDSSVVGFSGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPK--------ELHSYLTRVMYNRRNKFDPLWN 127
+SD Q L R+L +L + + D + P LH YL +++Y RRN FDPLWN
Sbjct: 89 VSDMQFLDRHLTDLSIDEAYEDPSCTAAPNGKGHLNAANLHKYLQKLLYKRRNDFDPLWN 148
Query: 128 SLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYED 181
L++ G K YL V + G +F +ATGFG+ LA+PI+R +E L+ E
Sbjct: 149 QLLIAGFDGHSKPYLASVDLRGTSFTSPSLATGFGSALAQPIMRRYAETEEDAAKLTREQ 208
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGFT 229
V+++++CM+VL YRD ++++ IA +T++G + + L K W F
Sbjct: 209 AVEVIKECMKVLYYRDARSLDRYSIAVVTKDGVELKEDEQLEKQSWAFA 257
>gi|255938700|ref|XP_002560120.1| Pc14g01260 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584741|emb|CAP74267.1| Pc14g01260 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 260
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 132/221 (59%), Gaps = 7/221 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P T P VTGTSVV +K+ G+ +A D SYGS R+ V+R++ G +++G G+
Sbjct: 29 PKAHTSSPAVTGTSVVGVKFNGGVAIATDNLASYGSLARFSDVKRLRNFGDKAMVGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q L R LD + + +N GN L K LH+YL +V Y RR++F+PLWN +++ G
Sbjct: 89 VSDMQYLDRLLDSMDIKENYSHHGNMLNAKNLHTYLAKVFYKRRSEFNPLWNHVLVAGFD 148
Query: 136 -NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-----ENLSYEDGVKLLEKC 189
G+ +L ++G F H+ATGFG HLA PILR ++ E +S ED V+ L++C
Sbjct: 149 GQGEPFLSSADLLGTTFSAPHLATGFGAHLAVPILRRKFPEGTPLEQVSKEDAVEALKEC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK-TFWGFT 229
++VL YRD + +K IA IT++G + + ++ W F
Sbjct: 209 LKVLFYRDARSADKYSIAVITKDGIDLKEDEQIQGQSWAFA 249
>gi|67539226|ref|XP_663387.1| hypothetical protein AN5783.2 [Aspergillus nidulans FGSC A4]
gi|40743686|gb|EAA62876.1| hypothetical protein AN5783.2 [Aspergillus nidulans FGSC A4]
Length = 551
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/220 (40%), Positives = 135/220 (61%), Gaps = 7/220 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+ G+ +AAD SYGS R+ V+R++ G +++G SG+
Sbjct: 320 PKTHTQSPAVTGTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRKFGDAAVIGFSGD 379
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L+ + + +N GN L K LH+YL++V Y RR+ F+PLWN +++ G
Sbjct: 380 VSDMQYIDRLLESIDIRENYSVHGNQLNAKNLHTYLSKVFYKRRSDFNPLWNHILVAGFD 439
Query: 136 NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
+ +K +L ++G F H+ATGFG HLA PILR + E +S ED V L+ C
Sbjct: 440 SEKKPFLSSADLLGTTFSAPHLATGFGAHLAIPILRRLFPEERPIEEISKEDAVSALKDC 499
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
++VL YRD +++K +A IT+EG + + ++ W F
Sbjct: 500 LKVLWYRDARSMDKYSLALITQEGIEMHEDQQVEAQNWAF 539
>gi|259484729|tpe|CBF81200.1| TPA: hypothetical proteasome beta 7 subunit (Eurofung) [Aspergillus
nidulans FGSC A4]
Length = 260
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 131/209 (62%), Gaps = 6/209 (2%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+ G+ +AAD SYGS R+ V+R++ G +++G SG+
Sbjct: 29 PKTHTQSPAVTGTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRKFGDAAVIGFSGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L+ + + +N GN L K LH+YL++V Y RR+ F+PLWN +++ G
Sbjct: 89 VSDMQYIDRLLESIDIRENYSVHGNQLNAKNLHTYLSKVFYKRRSDFNPLWNHILVAGFD 148
Query: 136 NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
+ +K +L ++G F H+ATGFG HLA PILR + E +S ED V L+ C
Sbjct: 149 SEKKPFLSSADLLGTTFSAPHLATGFGAHLAIPILRRLFPEERPIEEISKEDAVSALKDC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQ 218
++VL YRD +++K +A IT+EG + +
Sbjct: 209 LKVLWYRDARSMDKYSLALITQEGIEMHE 237
>gi|68470589|ref|XP_720540.1| hypothetical protein CaO19.4230 [Candida albicans SC5314]
gi|46442413|gb|EAL01702.1| hypothetical protein CaO19.4230 [Candida albicans SC5314]
Length = 278
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 141/214 (65%), Gaps = 10/214 (4%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P TQ P +TGTSV+A K+K+G++MAAD GSYGS +R+ ++ER+ +GK +++G S
Sbjct: 37 NFPKMNTQQPIITGTSVIASKFKNGVIMAADHVGSYGSLLRFNNIERLIKVGKETVVGIS 96
Query: 74 GEISDFQELLRNLDELILYDNMWDD--GNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
G+ISD Q ++R LDEL + + ++D+ G L +H YL+RV+YNRR+K +PLWN++++
Sbjct: 97 GDISDLQYIVRLLDELEIDEEVYDNDGGEYLRAPNVHEYLSRVLYNRRSKMNPLWNAIIV 156
Query: 132 GGV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSY-----EDGVKL 185
GG K+ +L V ++GV + S +ATGFG+HLA P+LR+ E+ Y + K
Sbjct: 157 GGFNKDRTPFLKYVDLLGVTYHASTMATGFGSHLAIPLLRNLIPEDKDYVKVDEQQVSKA 216
Query: 186 LEKCMRVLLYRD-RSAVN-KLQIAKITEEGTTIS 217
+E MRVL YRD RS N + I K+ E +S
Sbjct: 217 VEDSMRVLFYRDARSGENYSVVIIKLDENTGELS 250
>gi|367003819|ref|XP_003686643.1| hypothetical protein TPHA_0G03690 [Tetrapisispora phaffii CBS 4417]
gi|357524944|emb|CCE64209.1| hypothetical protein TPHA_0G03690 [Tetrapisispora phaffii CBS 4417]
Length = 265
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 140/226 (61%), Gaps = 11/226 (4%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P TQ P VTGTSV+++KY +G ++AAD G+YGS +R+ V+R+ P+G ++++G S
Sbjct: 28 NFPKMNTQQPIVTGTSVISIKYNNGTIIAADRLGAYGSLLRFTDVDRLFPVGNNTVVGIS 87
Query: 74 GEISDFQ---ELLRNLDELILYDNMW-DDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
G+ISD Q +LL +L+ YDN + DD SL P + YL VMY RR+K +PLWN++
Sbjct: 88 GDISDMQHIEKLLEDLETENNYDNSYADDEESLKPSYVFEYLAAVMYQRRSKMNPLWNAI 147
Query: 130 VLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPIL-----RDEWHENLSYEDGVK 184
V+ GV+NG+ +L V+++GV + +ATGFG H+A P+L RD E +
Sbjct: 148 VVAGVENGEPFLRYVNLLGVTYSSPTLATGFGAHMANPLLRRIVDRDSDVEKTDLQTAKN 207
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKI-TEEGTTISQPYALKTF-WGF 228
+ +CM+VL YRD + K +A I ++G T+ + ++ W F
Sbjct: 208 AILECMKVLYYRDARSSRKFSLAIIDKDQGLTLEKDLQVENMTWDF 253
>gi|449295230|gb|EMC91252.1| hypothetical protein BAUCODRAFT_117587 [Baudoinia compniacensis
UAMH 10762]
Length = 273
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 138/226 (61%), Gaps = 10/226 (4%)
Query: 13 PNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGA 72
P+ P TQ P VTGTSV+ALK+ G+++AAD SYGS R+ V+R++P +++++G
Sbjct: 36 PSHPTTHTQSPVVTGTSVLALKFSTGVVIAADNLASYGSLARFTDVKRLRPFNRNAIVGF 95
Query: 73 SGEISDFQELLRNLDELILYDNMWDDGNS---LGPKELHSYLTRVMYNRRNKFDPLWNSL 129
G++SD Q + R L L++ +N G S + + LH+YL++V+Y RR F+PLWN+L
Sbjct: 96 GGDVSDMQYIDRLLLSLVVQENYAGGGESVTLMNARNLHTYLSKVLYKRRTDFNPLWNAL 155
Query: 130 VLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGV 183
++GG+ QK +L ++G + +ATGFG HLA+PI+R + LS E+ V
Sbjct: 156 LVGGLDEHQKPFLAYADLLGTTYSAPSLATGFGAHLAQPIMRKVVPDEAAAAKLSKEEAV 215
Query: 184 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
K + +CM+VL YRD ++N+ +A + G + + L+ W F
Sbjct: 216 KTIRECMKVLFYRDARSMNEYSLAVVDVRGVELKEDNKLEAESWAF 261
>gi|444319881|ref|XP_004180597.1| hypothetical protein TBLA_0E00150 [Tetrapisispora blattae CBS 6284]
gi|387513640|emb|CCH61078.1| hypothetical protein TBLA_0E00150 [Tetrapisispora blattae CBS 6284]
Length = 265
Score = 170 bits (431), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 141/227 (62%), Gaps = 13/227 (5%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P T P VTGTSV+A+KYK G+++AAD SYGS +R+ +ER+ +G+++++G S
Sbjct: 28 NQPTTNTTQPIVTGTSVLAMKYKGGVVIAADNLASYGSLLRFNGIERLIKVGQNTVVGVS 87
Query: 74 GEISDFQELLRNLDELIL---YDNMWDDG-NSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
G++SD Q + R L+E+ YDN + + L P + YL+ VMY+RR+K +PLWN++
Sbjct: 88 GDVSDMQHIERLLEEIETDNNYDNTYSESFEQLQPSYVFKYLSAVMYSRRSKMNPLWNAI 147
Query: 130 VLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPIL-----RDEWHENLSYEDGVK 184
++ GV+NG ++ V+++GV + +ATGFG HLA P++ R+E N + E V+
Sbjct: 148 IVAGVENGAPFMRYVNLLGVTYTSPTLATGFGAHLANPLMRRVVDREEDVANTTREAAVE 207
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT---FWGF 228
++ CM+VL YRD + +A I E T +S + ++ WGF
Sbjct: 208 TIKNCMKVLYYRDARSAKSYSLAVIDCE-TGVSLEHGIEVDNMVWGF 253
>gi|226292461|gb|EEH47881.1| proteasome component Pre4 [Paracoccidioides brasiliensis Pb18]
Length = 260
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 136/207 (65%), Gaps = 6/207 (2%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+ G+ +AAD SYGS R+ ++R++P +++LG G+
Sbjct: 29 PNTHTQSPIVTGTSVIAVKFNGGVAIAADNLASYGSLARFTDIKRLRPFHNNAVLGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV- 134
+SD Q + R+L+ L + +N G++L + LH+YL+++MY RR++F+PLWN++++ G
Sbjct: 89 VSDMQFIDRHLNSLDIDENYSTYGHTLNAQNLHTYLSKLMYRRRSQFNPLWNNILVAGFD 148
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
NGQ +L V ++G + +ATGFG HLA P+LR D E ++ E+ VK L++C
Sbjct: 149 TNGQPFLSSVDLLGSTYSAPSLATGFGAHLAIPVLRRLFPEDRPLEQITEEEAVKALKEC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTI 216
++VL YRD + ++ IA + ++G ++
Sbjct: 209 LKVLFYRDARSTDRYSIAIVKKDGVSL 235
>gi|121709886|ref|XP_001272559.1| proteasome component Pre4, putative [Aspergillus clavatus NRRL 1]
gi|119400709|gb|EAW11133.1| proteasome component Pre4, putative [Aspergillus clavatus NRRL 1]
Length = 260
Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 85/221 (38%), Positives = 137/221 (61%), Gaps = 7/221 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSVVA+K+ G+ +AAD SYGS R+ +V+R++ G+ +++G SG+
Sbjct: 29 PKTHTQSPVVTGTSVVAVKFNGGVAIAADNLASYGSLARFSNVKRLRVFGESAVIGFSGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L+ + + +N GN L K LH+YL++V Y RR++F+PLWN +++ G
Sbjct: 89 VSDMQYIDRLLESIDIRENYSTHGNMLNAKNLHTYLSKVFYKRRSEFNPLWNQVLVAGFD 148
Query: 136 -NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
+ Q +L ++G F H+ATGFG HLA PILR + E ++ E+ V L +C
Sbjct: 149 GDEQPFLSSADLLGTTFSAPHLATGFGAHLAVPILRRLFPEERPIEEITKEEAVDALREC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
++VL YRD +++K +A I+++G + + ++ W F
Sbjct: 209 LKVLWYRDARSLDKFSLAVISKDGVELHEDQKIENQSWAFA 249
>gi|320586980|gb|EFW99643.1| proteasome component [Grosmannia clavigera kw1407]
Length = 276
Score = 169 bits (428), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 96/236 (40%), Positives = 135/236 (57%), Gaps = 23/236 (9%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P Q TQ P VTGTSVVALK+ G++MAAD SYGS R+ S R++ S++G SG+
Sbjct: 29 PKQATQSPIVTGTSVVALKFNGGVVMAADNLASYGSLARFNSTLRLRSFANTSVIGFSGD 88
Query: 76 ISDFQELLRNLDELIL---YDN--------MWDDG-----NSLGPKELHSYLTRVMYNRR 119
+SD Q L R+L EL + YDN DDG ++L LH YL ++MY RR
Sbjct: 89 VSDMQYLDRHLTELAIDETYDNPAPSAEERQDDDGEIKRSSTLNAANLHKYLAKLMYQRR 148
Query: 120 NKFDPLWNSLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEW 173
NKFDPLWN L++ G+ + K +L + G + +ATG+G+ LA+PI+R DE
Sbjct: 149 NKFDPLWNQLLVAGLDDESKPFLACADLRGTTYSAPSLATGYGSALAQPIMRRYAETDEQ 208
Query: 174 HENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
L+ E V ++ +CM+VL YRD +++ +A +T G IS L+ W F
Sbjct: 209 TAKLTREQAVDIVRECMKVLYYRDARSLDTYSLAIVTAAGVDISTSEKLEAQSWAF 264
>gi|354543281|emb|CCE39999.1| hypothetical protein CPAR2_100380 [Candida parapsilosis]
Length = 281
Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 136/213 (63%), Gaps = 14/213 (6%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P +TGTSV+A K+ +GI+MAAD GSYGS +R+ ++ER+ +G +++G SG+
Sbjct: 42 PKMNTQQPIITGTSVIASKFANGIIMAADHVGSYGSLLRFNNIERLIKVGSETVVGVSGD 101
Query: 76 ISDFQELLR----NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISDFQ + R E +YDN D GN L +H YL+RVMYNRR+K +PLWNS+V+
Sbjct: 102 ISDFQYIQRLLDELEIEEEVYDN--DGGNYLKAPNVHEYLSRVMYNRRSKMNPLWNSIVV 159
Query: 132 GGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSY----EDGV-KL 185
GG +K +L V ++GV + S +ATGFG+HLA P+LR+ E+ Y ED V K+
Sbjct: 160 GGFDAEKKPFLKYVDLLGVTYHASTIATGFGSHLAIPLLRNLIPEDKDYVKVNEDQVRKV 219
Query: 186 LEKCMRVLLYRDRSA--VNKLQIAKITEEGTTI 216
++ MRVL YRD + V + K+ EE I
Sbjct: 220 VDDSMRVLFYRDARSGEVYSYVVIKLDEESGEI 252
>gi|156837451|ref|XP_001642751.1| hypothetical protein Kpol_380p12 [Vanderwaltozyma polyspora DSM
70294]
gi|156113315|gb|EDO14893.1| hypothetical protein Kpol_380p12 [Vanderwaltozyma polyspora DSM
70294]
Length = 265
Score = 169 bits (428), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/236 (39%), Positives = 145/236 (61%), Gaps = 12/236 (5%)
Query: 5 QAKQGLVG-PNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKP 63
Q + + G P+ P TQ P +TGTSV+++KY +G+++AAD G+YGS +R+ VER+
Sbjct: 18 QYNEAIAGAPSFPKMNTQQPIITGTSVISMKYNNGVIIAADNLGAYGSLLRFNDVERLFA 77
Query: 64 IGKHSLLGASGEISDFQELLRNLDELIL---YDNMWDDG-NSLGPKELHSYLTRVMYNRR 119
IG+++++G SG+ISD Q + R LDEL + YDN DG SL P + YL VMY+RR
Sbjct: 78 IGENTVVGVSGDISDMQYIERLLDELQIENNYDNSTGDGAESLKPSYVFEYLAAVMYSRR 137
Query: 120 NKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWH 174
+K +PLWN++++ G+++ + +L V+++GV + +ATGFG H+A P+LR +E
Sbjct: 138 SKMNPLWNAIIVAGMEDNKPFLRYVNLLGVTYSSQTLATGFGAHMANPLLRKVVDKEEDV 197
Query: 175 ENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKI-TEEGTTISQPYALKTF-WGF 228
N E K + + M+VL YRD + K +A I G T + ++ WGF
Sbjct: 198 ANTDLETAKKAILESMKVLYYRDARSSRKFSMAIIDNTTGLTFQKNLEVENMVWGF 253
>gi|448532324|ref|XP_003870407.1| 20S proteasome subunit (beta7) [Candida orthopsilosis Co 90-125]
gi|380354762|emb|CCG24277.1| 20S proteasome subunit (beta7) [Candida orthopsilosis]
Length = 281
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/213 (44%), Positives = 134/213 (62%), Gaps = 14/213 (6%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P +TGTSV+A K+ +GI+MAAD GSYGS +R+ ++ER+ +G +++G SG+
Sbjct: 42 PKMNTQQPIITGTSVIASKFANGIIMAADHVGSYGSLLRFNNIERLIKVGSETVVGVSGD 101
Query: 76 ISDFQELLR----NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISDFQ + R E +YDN D GN L +H YL+RVMYNRR+K DPLWNS+V+
Sbjct: 102 ISDFQYIKRLLDELEIEEEVYDN--DGGNYLKAPNVHEYLSRVMYNRRSKMDPLWNSIVV 159
Query: 132 GGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSY-----EDGVKL 185
GG +K +L V ++GV + S +ATGFG+HLA P+LR+ E+ Y + K+
Sbjct: 160 GGFDAERKPFLKYVDLLGVTYHASTIATGFGSHLAIPLLRNLIPEDKDYVKVNEDQAKKV 219
Query: 186 LEKCMRVLLYRDRSA--VNKLQIAKITEEGTTI 216
++ MRVL YRD + V + K+ EE +
Sbjct: 220 IDDSMRVLFYRDARSGEVFSYVVIKLDEESGEV 252
>gi|389642243|ref|XP_003718754.1| proteasome component PRE4 [Magnaporthe oryzae 70-15]
gi|351641307|gb|EHA49170.1| proteasome component PRE4 [Magnaporthe oryzae 70-15]
gi|440468083|gb|ELQ37266.1| proteasome component PRE4 [Magnaporthe oryzae Y34]
gi|440489043|gb|ELQ68724.1| proteasome component PRE4 [Magnaporthe oryzae P131]
Length = 269
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 137/230 (59%), Gaps = 16/230 (6%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSVV LK+KDG+++AAD SYGS R+ S R++ S++G G+
Sbjct: 29 PKAATQSPVVTGTSVVGLKFKDGVVIAADNLASYGSLARFSSTHRLRSFANSSVVGFGGD 88
Query: 76 ISDFQELLRNLDELIL---YDNMWDDG------NSLGPKELHSYLTRVMYNRRNKFDPLW 126
+SD Q L R+L+EL + Y N D+ +SL + LH YL++++Y RRNKFDPLW
Sbjct: 89 VSDMQYLDRHLNELAIDEAYANPADESTESSRDSSLNAQNLHKYLSKLLYGRRNKFDPLW 148
Query: 127 NSLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYE 180
N +++ G+ K +L ++G F +A+G+G+ LA PI+R +E LS E
Sbjct: 149 NQILVAGLDADDKPFLASADLLGTTFSAPALASGYGSMLAIPIMRRAVPSEEEAAKLSRE 208
Query: 181 DGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGFT 229
+ V ++++CM+VL YRD + + +A +T+EG +S L + W F
Sbjct: 209 EAVAVVKECMKVLFYRDARSSDSYSLAVVTKEGVELSTDEKLEQQSWAFA 258
>gi|296805317|ref|XP_002843483.1| proteasome component Pre4 [Arthroderma otae CBS 113480]
gi|238844785|gb|EEQ34447.1| proteasome component Pre4 [Arthroderma otae CBS 113480]
Length = 266
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/227 (38%), Positives = 141/227 (62%), Gaps = 13/227 (5%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGS-----YGSTIRYKSVERIKPIGKHSLL 70
P+ TQ P VTGTSV+A+K+KDG+++AAD GS YGS R+ V+R++ S++
Sbjct: 29 PMTHTQRPIVTGTSVIAVKFKDGVVIAADNLGSPAPASYGSLARFTDVKRLRAFDNSSVV 88
Query: 71 GASGEISDFQELLRNLDELILYDNMWDDG-NSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
G G++SD Q + R L+ L + +N G +SL K LH+YL++++Y RR+ FDPLWN +
Sbjct: 89 GFGGDVSDMQYIDRVLNSLDIQENYSTYGEHSLNAKNLHTYLSKLLYKRRSDFDPLWNHI 148
Query: 130 VLGGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGV 183
++ G+ G+ +L ++G + +ATGFG HLA PILR ++ EN++ E +
Sbjct: 149 LVAGLDGEGKPFLSSADLLGTTYSAPSLATGFGAHLAIPILRRLFPEEDGIENITKEQAI 208
Query: 184 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
+++CM+VL YRD + ++ IA +T+EG + + AL+ W F
Sbjct: 209 DAMKQCMKVLFYRDARSSDRYSIAVVTKEGVELKEDEALENQSWAFA 255
>gi|58257385|gb|AAW69314.1| proteasome subunit beta-like protein [Magnaporthe grisea]
Length = 269
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 137/230 (59%), Gaps = 16/230 (6%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSVV LK+KDG+++AAD SYGS R+ S R++ S++G G+
Sbjct: 29 PKAATQSPVVTGTSVVGLKFKDGVVIAADNLASYGSLARFSSTHRLRSFANSSVVGFGGD 88
Query: 76 ISDFQELLRNLDELIL---YDNMWDDG------NSLGPKELHSYLTRVMYNRRNKFDPLW 126
+SD Q L R+L+EL + Y N D+ +SL + LH YL++++Y RRNKFDPLW
Sbjct: 89 VSDMQYLDRHLNELAIDEAYANPADESTESSRDSSLNAQNLHKYLSKLLYGRRNKFDPLW 148
Query: 127 NSLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYE 180
N +++ G+ K +L ++G F +A+G+G+ LA PI+R +E LS E
Sbjct: 149 NQILVAGLDPDDKPFLASADLLGTTFSAPALASGYGSMLAIPIMRRAVPSEEEAAKLSRE 208
Query: 181 DGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGFT 229
+ V ++++CM+VL YRD + + +A +T+EG +S L + W F
Sbjct: 209 EAVAVVKECMKVLFYRDARSSDSYSLAVVTKEGVELSTDEKLEQQSWAFA 258
>gi|242786412|ref|XP_002480800.1| proteasome component Pre4, putative [Talaromyces stipitatus ATCC
10500]
gi|218720947|gb|EED20366.1| proteasome component Pre4, putative [Talaromyces stipitatus ATCC
10500]
Length = 260
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 129/220 (58%), Gaps = 7/220 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+ G+ MA D SYGS R+ V RI+ +++G G+
Sbjct: 29 PKTHTQSPAVTGTSVIAVKFNGGVAMATDNLASYGSLARFTDVNRIRTFDDAAIVGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV- 134
+SD Q + R L + + +N G++L K LH+YL +V Y RR++ +PLWN +++ G
Sbjct: 89 VSDMQYIDRLLGSIQIRENYTATGSTLNAKNLHTYLAKVFYKRRSEMNPLWNHILVAGFD 148
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
+G +L ++G F H+ATGFG HLA PILR D EN+S E ++ L C
Sbjct: 149 SDGSPFLSSADLLGTTFSGPHLATGFGAHLAVPILRRLFPEDTPIENISKEQAIQALRDC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
MRVL YRD ++++ +A IT++G + L++ W F
Sbjct: 209 MRVLFYRDARSLDQYTLAVITKDGVEVKNKEKLESQSWAF 248
>gi|154336879|ref|XP_001564675.1| putative 20s proteasome beta 7 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061710|emb|CAM38741.1| putative 20s proteasome beta 7 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 220
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 131/211 (62%), Gaps = 3/211 (1%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+G S+VA+KY G+LMAAD SYGS ++ ++ RIK +G HS + A+G +DFQ + +
Sbjct: 2 ASGGSIVAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGGHSAVCATGSYADFQMMAK 61
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+++ I M+ + + + P E+ SYL R +Y +R F+P +VL G ++G+ +L V
Sbjct: 62 RVEDNIERQKMYHNVDEMHPNEVFSYLHRSIYQKRCDFEPCLCQMVLIGARDGKTFLAAV 121
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHEN---LSYEDGVKLLEKCMRVLLYRDRSAV 201
+G +ED +ATG+G H+A P+LR +N LS + +++L C+RVL YR+ A+
Sbjct: 122 DDVGTRWEDDCIATGYGGHIALPLLRQALEKNPGGLSRAEAMQILTDCLRVLFYRECRAI 181
Query: 202 NKLQIAKITEEGTTISQPYALKTFWGFTAFQ 232
NK Q+A T +G IS+P+ ++T W + +
Sbjct: 182 NKFQMADATGDGVHISEPFEVETNWAYEGYH 212
>gi|158297668|ref|XP_317860.3| AGAP011444-PA [Anopheles gambiae str. PEST]
gi|157014687|gb|EAA12997.3| AGAP011444-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 133/215 (61%), Gaps = 7/215 (3%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QR+ P TGTSVV L +KDG+++AAD SYGS R+ V+R+ I ++LG G+ +
Sbjct: 49 QRSYYPVTTGTSVVGLMFKDGVIIAADKLISYGSLARFHDVDRVYRINDKTVLGIGGDFA 108
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ + R++D+ ++ D DD N + P+ +++LTRVMYNRR++F PL+ LV+GG+++G
Sbjct: 109 DFQYIKRHIDQKVIDDQCLDDKNEMKPRSFYNWLTRVMYNRRSEFQPLYLDLVIGGMQDG 168
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN------LSYEDGVKLLEKCMR 191
+ +LG V++ G ++ + VATG+G HLA P+LR EW EN L + L+++ M
Sbjct: 169 EPFLGHVNLRGRSYTSNVVATGYGTHLALPLLR-EWSENPTAYQTLGQPEANDLMKRVME 227
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
VL YRD + K A T +G + + W
Sbjct: 228 VLWYRDCRSDPKYSQAVCTADGVKVDADCFVAQNW 262
>gi|118776894|ref|XP_306986.3| Anopheles gambiae str. PEST AGAP012608-PA [Anopheles gambiae str.
PEST]
gi|116133232|gb|EAA02777.3| AGAP012608-PA [Anopheles gambiae str. PEST]
Length = 271
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/215 (40%), Positives = 133/215 (61%), Gaps = 7/215 (3%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QR+ P TGTSVV L +KDG+++AAD SYGS R+ V+R+ I ++LG G+ +
Sbjct: 49 QRSYYPVTTGTSVVGLMFKDGVIIAADKLISYGSLARFHDVDRVYRINDKTVLGIGGDFA 108
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ + R++D+ ++ D DD N + P+ +++LTRVMYNRR++F PL+ LV+GG+++G
Sbjct: 109 DFQYIKRHIDQKVIDDQCLDDKNEMKPRSFYNWLTRVMYNRRSEFQPLYLDLVIGGMQDG 168
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN------LSYEDGVKLLEKCMR 191
+ +LG V++ G ++ + VATG+G HLA P+LR EW EN L + L+++ M
Sbjct: 169 EPFLGHVNLRGRSYTSNVVATGYGTHLALPLLR-EWSENPTAYQTLGQPEANDLMKRVME 227
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
VL YRD + K A T +G + + W
Sbjct: 228 VLWYRDCRSDPKYSQAVCTADGVKVDADCFVAQNW 262
>gi|225680768|gb|EEH19052.1| proteasome component PRE4 [Paracoccidioides brasiliensis Pb03]
Length = 260
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 134/207 (64%), Gaps = 6/207 (2%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+ G+ +AAD SYGS R+ ++R++P +++LG G+
Sbjct: 29 PNTHTQSPIVTGTSVIAVKFNGGVAIAADNLASYGSLARFTDIKRLRPFHNNAVLGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV- 134
+SD Q + R L L + +N G++L + LH+YL+++MY RR++F+PLWN++++ G
Sbjct: 89 VSDMQFIDRLLTSLDIDENYSTYGHTLNAQNLHTYLSKLMYRRRSQFNPLWNNILVAGFD 148
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
NGQ +L V ++G + +ATGFG HLA P+LR D E ++ E+ VK L++C
Sbjct: 149 TNGQPFLSSVDLLGSTYSAPSLATGFGAHLAIPVLRRLFPEDRPLEQITEEEAVKALKEC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTI 216
++VL YRD + ++ IA + ++G ++
Sbjct: 209 LKVLFYRDARSTDRYSIAIVKKDGVSL 235
>gi|154336885|ref|XP_001564678.1| putative 20s proteasome beta 7 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061713|emb|CAM38744.1| putative 20s proteasome beta 7 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 220
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 131/211 (62%), Gaps = 3/211 (1%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+G S+VA+KY G+LMAAD SYGS ++ ++ RIK +G HS + A+G +DFQ + +
Sbjct: 2 ASGGSIVAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGGHSAVCATGSYADFQMVAK 61
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+++ I M+ + + + P E+ SYL R +Y +R F+P +VL G ++G+ +L V
Sbjct: 62 RVEDNIERQKMYHNVDEMHPNEVFSYLHRSIYQKRCDFEPCLCQMVLIGARDGKTFLAAV 121
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHEN---LSYEDGVKLLEKCMRVLLYRDRSAV 201
+G +ED +ATG+G H+A P+LR +N LS + +++L C+RVL YR+ A+
Sbjct: 122 DDVGTRWEDDCIATGYGGHIALPLLRQALEKNPGGLSRAEAMQILTDCLRVLFYRECRAI 181
Query: 202 NKLQIAKITEEGTTISQPYALKTFWGFTAFQ 232
NK Q+A T +G IS+P+ ++T W + +
Sbjct: 182 NKFQMADATGDGVHISEPFEVETNWAYEGYH 212
>gi|365984144|ref|XP_003668905.1| hypothetical protein NDAI_0B06310 [Naumovozyma dairenensis CBS 421]
gi|343767672|emb|CCD23662.1| hypothetical protein NDAI_0B06310 [Naumovozyma dairenensis CBS 421]
Length = 265
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/210 (40%), Positives = 136/210 (64%), Gaps = 9/210 (4%)
Query: 12 GPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLG 71
P P TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ +ER+ +GK +++G
Sbjct: 26 APAYPTMNTQQPIVTGTSVLSMKYNNGVIIAADNLGSYGSLLRFNDIERLIKVGKSTIVG 85
Query: 72 ASGEISDFQELLRNLDELIL---YDNMW-DDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
SG+ISD Q + + LD++ + YDN++ +D +L P + YL VMYNRR+K +PLWN
Sbjct: 86 ISGDISDMQHIEKLLDDMEIENNYDNLYANDEEALKPSYVFEYLAAVMYNRRSKMNPLWN 145
Query: 128 SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYED---G 182
+L++ GV++G+ +L V+++GV + +ATGFG HLA P+LR + +++ D
Sbjct: 146 ALIVAGVEDGKPFLRYVNLLGVTYSSPTLATGFGAHLAIPLLRRVIDNESDIAKTDLDTA 205
Query: 183 VKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
+ +CM+VL YRD + K +A I +
Sbjct: 206 KNTILECMKVLYYRDARSSRKFSLAIIDND 235
>gi|261201312|ref|XP_002627056.1| proteasome component Pre4 [Ajellomyces dermatitidis SLH14081]
gi|239592115|gb|EEQ74696.1| proteasome component Pre4 [Ajellomyces dermatitidis SLH14081]
gi|239611722|gb|EEQ88709.1| proteasome component Pre4 [Ajellomyces dermatitidis ER-3]
gi|327348262|gb|EGE77119.1| proteasome subunit beta type [Ajellomyces dermatitidis ATCC 18188]
Length = 260
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 133/221 (60%), Gaps = 7/221 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+ G+ +AAD SYGS R+ ++R++P +++G G+
Sbjct: 29 PQTHTQSPAVTGTSVIAVKFNGGVAIAADNLASYGSLARFTDIKRLRPFDNAAVIGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L L + DN G+SL + LH+YL++VMY RR++F+PLWN +++ G
Sbjct: 89 VSDMQYVDRLLTFLDIEDNYSTYGHSLNAQNLHTYLSKVMYRRRSEFNPLWNMILVAGFD 148
Query: 136 NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYED-----GVKLLEKC 189
K +L V ++G + H+ATGFG HLA P+LR + E ED VK L++C
Sbjct: 149 GEDKPFLSSVDLLGNTYSAPHLATGFGAHLAIPVLRRVFPEETPLEDIKEEHAVKALQEC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
M+VL YRD + ++ IA + ++G + + L+ W F
Sbjct: 209 MKVLFYRDARSTDRYSIAVVKKDGVELKENEQLENQSWAFA 249
>gi|407921856|gb|EKG14994.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 274
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 130/220 (59%), Gaps = 20/220 (9%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+Q TQ P VTGTSVVA+KYKDG+++AAD SYGS R+ V+R++ S++G G+
Sbjct: 29 PVQHTQQPIVTGTSVVAVKYKDGVVIAADNLASYGSLARFTDVKRLRVFNNKSVIGFGGD 88
Query: 76 ISDFQELLRNLDELILY------------DNMWDDGNSLGPKELHSYLTRVMYNRRNKFD 123
+SD Q L R L L + DN +SL K LH+YL++V+Y RR++F+
Sbjct: 89 VSDMQYLDRLLTSLSIREDYGQHEAAEDNDNEAASPSSLNAKNLHTYLSKVLYRRRSEFN 148
Query: 124 PLWNSLVLGGVKN--GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHEN 176
PLWN L++ G + +L ++G F +ATGFG HLA PILR +E
Sbjct: 149 PLWNVLLIAGFDHDGATPFLAHADLLGTTFSAPALATGFGAHLATPILRKRVPDEEAARK 208
Query: 177 LSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTI 216
LS ED + L++ CM+VL YRD ++++ IA + E G I
Sbjct: 209 LSKEDAITLVKDCMKVLFYRDARSLDRYSIA-VIERGHDI 247
>gi|342180459|emb|CCC89935.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 218
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 131/208 (62%), Gaps = 3/208 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TG SV+ LKY G+L+A+D SYGS ++ ++ RIK IG+H+++ A+G+ +DFQ++ N
Sbjct: 3 TGGSVIGLKYNGGVLLASDTLLSYGSLAKWPNIPRIKLIGRHTVICATGDYADFQDMTEN 62
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
L+ ++ M+ L PKE+ YL R +Y++R++F+P V+ G +G+++LG V
Sbjct: 63 LENHVIRQEMYSRA-VLTPKEIFCYLQRHVYHKRSEFEPCLCQFVVAGCADGEQFLGGVD 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHE--NLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+G + D VATG+ H+A P+LR + LS E+ + +++ C+RVL YR+ A+NK
Sbjct: 122 DVGTQWMDDCVATGYAAHMAVPLLRKALEKPGGLSREEAIDVVKNCLRVLFYRECRAINK 181
Query: 204 LQIAKITEEGTTISQPYALKTFWGFTAF 231
QIA T TI +P+ ++T W + F
Sbjct: 182 FQIADATGGKVTICEPFEVETNWEYEGF 209
>gi|367042916|ref|XP_003651838.1| hypothetical protein THITE_2112572 [Thielavia terrestris NRRL 8126]
gi|346999100|gb|AEO65502.1| hypothetical protein THITE_2112572 [Thielavia terrestris NRRL 8126]
Length = 271
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/233 (39%), Positives = 134/233 (57%), Gaps = 20/233 (8%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+KDG++MAAD SYGS R+ V+R++P S++G G+
Sbjct: 29 PKTATQSPVVTGTSVIAIKFKDGVVMAADNLASYGSLARFTDVKRLRPFLSTSVVGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDD------------GNSLGPKELHSYLTRVMYNRRNKFD 123
+SD Q L R+L EL + D ++ G L LH YL+++MY RRN FD
Sbjct: 89 VSDMQYLDRHLTELAI-DEAYEHESSAAGTSGGAPGGQLNAANLHKYLSKLMYRRRNDFD 147
Query: 124 PLWNSLVLGGVKN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDE-----WHENL 177
PLWN +++ G G+ +LG V + G F +A+GFG LA+PI+R L
Sbjct: 148 PLWNQVLVAGFDGAGKPFLGSVDLRGTAFAAPSLASGFGAMLAQPIMRRHAATDADAAAL 207
Query: 178 SYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGFT 229
S E V+++ CM+VL YRD ++++ +A +T +G IS+ L + W F
Sbjct: 208 SREQAVQIVRDCMKVLFYRDARSLDRYSLAVVTRDGVEISEDERLEQQSWAFA 260
>gi|260941227|ref|XP_002614780.1| hypothetical protein CLUG_05558 [Clavispora lusitaniae ATCC 42720]
gi|238851966|gb|EEQ41430.1| hypothetical protein CLUG_05558 [Clavispora lusitaniae ATCC 42720]
Length = 269
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/213 (40%), Positives = 136/213 (63%), Gaps = 7/213 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P +TGTSV+ LK+K+GI++AAD GSYGS +R+ ++ER+ +G +++G SG+
Sbjct: 33 PSMHTQQPIITGTSVLGLKFKNGIVIAADHMGSYGSLLRFNNIERLIRVGSETVVGISGD 92
Query: 76 ISDFQELLRNLDELILYDNMWDD-GNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
ISD Q + R L +L + ++D+ G L +H YLTRV+YNRR+K DPLWN++++ G
Sbjct: 93 ISDLQHIERLLHQLETEEEVYDNTGAKLRAPHIHEYLTRVLYNRRSKMDPLWNAVIVAGF 152
Query: 135 KNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEK 188
+ + ++ V ++GV + S +ATGFG HLA P+LR DE + ++ E+ + +
Sbjct: 153 NDDRSPFIRYVDLLGVAYGASALATGFGAHLAIPLLRQLVPYDEDYVKVTEEEAREAIVN 212
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYA 221
MRVL YRD A +K +A +T E + +A
Sbjct: 213 SMRVLYYRDARASDKYTLATLTFEDGKVQVKFA 245
>gi|169769577|ref|XP_001819258.1| proteasome subunit beta type-4 [Aspergillus oryzae RIB40]
gi|83767117|dbj|BAE57256.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391863541|gb|EIT72849.1| 20S proteasome, regulatory subunit beta type PSMB4/PRE4
[Aspergillus oryzae 3.042]
Length = 260
Score = 166 bits (421), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/221 (39%), Positives = 133/221 (60%), Gaps = 7/221 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+ G+ +AAD SYGS R+ V+R++ G +++G SG+
Sbjct: 29 PKTHTQSPAVTGTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRVFGDSAVVGFSGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L+ L + +N GN + K LH+YL++V+Y RR++F+PLWN +++ G
Sbjct: 89 VSDMQYIDRLLESLDIRENYSTHGNMMNAKNLHTYLSKVLYKRRSEFNPLWNHILVAGFD 148
Query: 136 NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVK-----LLEKC 189
+K +L ++G + H+ATGFG HLA PILR + E E+ K L +C
Sbjct: 149 EDKKPFLSSADLLGTTYSAPHLATGFGAHLAIPILRRLFPEEKPLEEISKGEAEAALREC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
++VL YRD +++K IA IT EG I + ++ W F
Sbjct: 209 LKVLWYRDARSLDKYSIAVITAEGVEIKEDQVIEAQSWAFA 249
>gi|406862538|gb|EKD15588.1| proteasome component PRE4 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 260
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 137/225 (60%), Gaps = 10/225 (4%)
Query: 12 GPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLG 71
GPN Q T+ P VTGTSV+ALK+KDG+++AAD SYGS R+ V+R++ +++G
Sbjct: 28 GPN---QHTKSPIVTGTSVLALKFKDGVVIAADNLASYGSLARFTDVKRLRKFADTTVVG 84
Query: 72 ASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
G++SD Q L R L+ L + + G++L K LH+YLT+V Y RR+ F+PLWN +++
Sbjct: 85 FGGDVSDMQYLDRLLNSLDIDEAYGPAGHTLNAKNLHTYLTKVFYKRRSDFNPLWNQVLV 144
Query: 132 GGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKL 185
G+ K +L ++G F +ATGFG HLA+P+LR +E LS E ++
Sbjct: 145 AGLDEESKPFLASTDLLGTAFSSPSLATGFGAHLAQPLLRKVAPDEEAASKLSQEQALEA 204
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGFT 229
+++ M+VL YRD +++K IA +++ G + + L K W F
Sbjct: 205 VKESMKVLFYRDARSLDKYSIAVVSKAGIELKEDEKLEKQSWAFA 249
>gi|380471451|emb|CCF47272.1| proteasome A-type and B-type [Colletotrichum higginsianum]
Length = 263
Score = 166 bits (420), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 134/226 (59%), Gaps = 10/226 (4%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P Q TQ P VTGTSV+A+K+ G+++AAD SYGS R+ V+R++ +++G
Sbjct: 27 NGPNQATQAPIVTGTSVIAIKFSHGVVIAADNLASYGSLARFTDVKRLRTFANSTVIGFG 86
Query: 74 GEISDFQELLRNLDELIL---YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
G++SD Q L R+L L + YD D L LH YL++++Y RR+ FDPLWN L+
Sbjct: 87 GDVSDMQYLDRHLSALDIEESYDLSADTPARLNAANLHKYLSKLLYKRRSDFDPLWNHLL 146
Query: 131 LGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVK 184
+ G+ + K +L ++G F +ATGFG+ LA+PI+R +E LS E ++
Sbjct: 147 VAGLDDSNKPFLAAADLLGTTFTSPSLATGFGSALAQPIMRRYVPDEESAAKLSKEQAIE 206
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGFT 229
++++CM+VL YRD + + IA +T++G + + L K W F
Sbjct: 207 VIKECMKVLFYRDARSSDNYSIAVVTKDGVDLKESEKLEKQSWKFA 252
>gi|453082124|gb|EMF10172.1| proteasome endopeptidase complex, beta subunit [Mycosphaerella
populorum SO2202]
Length = 271
Score = 166 bits (420), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 135/230 (58%), Gaps = 13/230 (5%)
Query: 12 GPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLG 71
G PI TQ P VTGTSV+ LK+K G+++AAD SYGS R+ V R+KP + +++G
Sbjct: 30 GTQQPITHTQSPIVTGTSVIGLKFKSGVVIAADNLASYGSLARFTDVHRLKPFNRKTVVG 89
Query: 72 ASGEISDFQ---ELLRNLD--ELILYDNMWDDGNS-LGPKELHSYLTRVMYNRRNKFDPL 125
G++SD Q LL++LD E + D+G++ + K LH+YL +VMY RR F+PL
Sbjct: 90 FGGDVSDMQYIDRLLQSLDIEETYGTASHEDEGDAIMSAKNLHTYLAKVMYKRRTDFNPL 149
Query: 126 WNSLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSY 179
WN+L++ G+ K +L ++G F +ATGFG HLA+PILR + + L
Sbjct: 150 WNALLVAGLDEKNKPFLASADLLGTTFSAPTLATGFGAHLAQPILRRSVPDEAASQKLER 209
Query: 180 EDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK-TFWGF 228
D VK ++ CM+VL YRD ++ IA I E+G + + L+ W F
Sbjct: 210 ADAVKAIKDCMKVLFYRDARSMPVYSIAVIDEKGVELHEDEKLEDQSWDF 259
>gi|194898711|ref|XP_001978911.1| GG11060 [Drosophila erecta]
gi|190650614|gb|EDV47869.1| GG11060 [Drosophila erecta]
Length = 268
Score = 166 bits (419), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/221 (37%), Positives = 135/221 (61%), Gaps = 4/221 (1%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
VGP Q + TG+SV+ ++Y G+++AAD SYGS RY+++ER+ I K+ LL
Sbjct: 42 VGPYG-TQHSTAAITTGSSVLGIRYDAGVMLAADTLVSYGSLARYQNIERVFKINKNILL 100
Query: 71 GASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
G SG+ +D Q + RN+D+ ++ D +DD + PK L S++TRV+YNRR++ +PL+ +V
Sbjct: 101 GGSGDFADIQSIKRNIDQKMIEDQCYDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVV 160
Query: 131 LGGVKN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYE--DGVKLLE 187
+GGV N G YL V + G + ED VATGF HLA P++R++ ++ + + +L+
Sbjct: 161 VGGVDNEGTPYLANVDLRGRSHEDYVVATGFARHLAIPLVREKKPKDRDFTAVEASELIR 220
Query: 188 KCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
CM VL YRD +++ + + +G + P+ + W F
Sbjct: 221 TCMEVLYYRDTRNISQFTVGVCSAKGCDVEGPFQVNENWTF 261
>gi|212543353|ref|XP_002151831.1| proteasome component Pre4, putative [Talaromyces marneffei ATCC
18224]
gi|210066738|gb|EEA20831.1| proteasome component Pre4, putative [Talaromyces marneffei ATCC
18224]
Length = 260
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 130/220 (59%), Gaps = 7/220 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSVVA+K+ G+ MA D SYGS R+ V RI+ +++G G+
Sbjct: 29 PKTHTQSPAVTGTSVVAVKFNGGVAMATDNLASYGSLARFTDVNRIRTFDDSAIVGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV- 134
+SD Q + R L + + +N G++L K LH+YL++V Y RR++ +PLWN +++ G
Sbjct: 89 VSDMQYIDRLLGSIQIRENYSATGSTLNAKNLHTYLSKVFYKRRSEMNPLWNHILVAGFD 148
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-----ENLSYEDGVKLLEKC 189
+G+ +L ++G + H+ATGFG HLA PILR + EN+S E +K L C
Sbjct: 149 SDGKPFLSSADLLGTTYSGPHLATGFGAHLAVPILRRLFPEEIPIENISKEQAIKALRDC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGF 228
M+VL YRD ++++ +A IT++G I L + W F
Sbjct: 209 MKVLFYRDARSMDQYTLAVITQDGVEIKDKEKLEQQSWQF 248
>gi|195568398|ref|XP_002102203.1| GD19625 [Drosophila simulans]
gi|194198130|gb|EDX11706.1| GD19625 [Drosophila simulans]
Length = 268
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 129/206 (62%), Gaps = 3/206 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGTSV+ ++Y G+++AAD SYGS RY+++ER+ I K+ LLG SG+ +D Q + RN
Sbjct: 56 TGTSVLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKINKNILLGGSGDFADIQSIKRN 115
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN-GQKYLGMV 144
+D+ ++ D DD + PK L S++TRV+YNRR++ +PL+ +V+GGV N G YL V
Sbjct: 116 IDQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANV 175
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYE--DGVKLLEKCMRVLLYRDRSAVN 202
+ G ++ED VATGF HLA P++R++ ++ + + +L+ CM VL YRD ++
Sbjct: 176 DLRGRSYEDYVVATGFARHLAIPLVREKKPKDRDFTAVEASELIRTCMEVLYYRDTRNIS 235
Query: 203 KLQIAKITEEGTTISQPYALKTFWGF 228
+ + + G + P+ + W F
Sbjct: 236 QYTVGVCSVNGCGVEGPFQVNENWTF 261
>gi|310790861|gb|EFQ26394.1| proteasome A-type and B-type [Glomerella graminicola M1.001]
Length = 263
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 135/226 (59%), Gaps = 10/226 (4%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P Q TQ P VTGTSV+A+K+ +G+++AAD SYGS R+ V+R++ +++G
Sbjct: 27 NGPNQATQSPIVTGTSVIAMKFSEGVVIAADNLASYGSLARFTDVKRLRTFANSTVVGFG 86
Query: 74 GEISDFQELLRNLDELIL---YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
G++SD Q L R+L L + YD D L LH YL++++Y RR+ FDPLWN L+
Sbjct: 87 GDVSDMQYLDRHLSGLDIEESYDLSSDAPARLNAANLHKYLSKLLYKRRSDFDPLWNHLL 146
Query: 131 LGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVK 184
+ G+ + K +L ++G F +ATGFG+ LA+PI+R +E LS E ++
Sbjct: 147 VAGLDDSNKPFLAAADLLGTTFTSPSLATGFGSALAQPIMRRYVPDEEAAAKLSKEQAIE 206
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGFT 229
++++CM+VL YRD + + IA +T++G + + L K W F
Sbjct: 207 VIKECMKVLFYRDARSSDNYSIAVVTKDGVDLKENEKLEKQSWKFA 252
>gi|378726087|gb|EHY52546.1| 20S proteasome subunit beta 7 [Exophiala dermatitidis NIH/UT8656]
Length = 262
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/222 (36%), Positives = 141/222 (63%), Gaps = 9/222 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI TQ P VTGTSV+ +K+KDG+++AAD SYGS R+ ++R++ ++++G G+
Sbjct: 29 PITHTQSPAVTGTSVLGVKFKDGVVLAADNLASYGSLARFTDIKRLRTFPPNTVIGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDD-GNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+SD Q L R L L + +N G++L K LH+YL++V+Y RR++F+PLWN +++ G+
Sbjct: 89 VSDMQYLDRLLQSLDIRENYLSSYGHTLNAKNLHTYLSKVLYKRRSEFNPLWNMILVAGL 148
Query: 135 KNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR------DEWHENLSYEDGVKLLE 187
+ +K +L ++G F +ATGFG HLA+P+LR ++ ++++ E V ++
Sbjct: 149 DDDEKPFLAAADLLGTTFSSPTLATGFGAHLAQPLLRKLMPHDEDSVKDITEEMAVNAIK 208
Query: 188 KCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
+CM+VL YRD +++K IA + ++G + + L+ W F
Sbjct: 209 ECMKVLFYRDARSLDKYSIAVVRKDGVQLKEDERLENQSWAF 250
>gi|238488108|ref|XP_002375292.1| proteasome component Pre4, putative [Aspergillus flavus NRRL3357]
gi|220700171|gb|EED56510.1| proteasome component Pre4, putative [Aspergillus flavus NRRL3357]
Length = 260
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/217 (39%), Positives = 132/217 (60%), Gaps = 7/217 (3%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
TQ P VTGTSV+A+K+ G+ +AAD SYGS R+ V+R++ G +++G SG++SD
Sbjct: 33 TQSPAVTGTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRVFGDSAVVGFSGDVSDM 92
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
Q + R L+ L + +N GN + K LH+YL++V+Y RR++F+PLWN +++ G +K
Sbjct: 93 QYIDRLLESLDIRENYSTHGNMMNAKNLHTYLSKVLYKRRSEFNPLWNHILVAGFDEDKK 152
Query: 140 -YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVK-----LLEKCMRVL 193
+L ++G + H+ATGFG HLA PILR + E E+ K L +C++VL
Sbjct: 153 PFLSSADLLGTTYSAPHLATGFGAHLAIPILRRLFPEEKPLEEISKGEAEAALRECLKVL 212
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
YRD +++K IA IT EG I + ++ W F
Sbjct: 213 WYRDARSLDKYSIAVITAEGVEIKEDQVIEAQSWAFA 249
>gi|195396252|ref|XP_002056746.1| GJ10047 [Drosophila virilis]
gi|194143455|gb|EDW59858.1| GJ10047 [Drosophila virilis]
Length = 265
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 132/207 (63%), Gaps = 3/207 (1%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
TG+SVV +K+ G+L+AAD SYGS RY+ ++R+ I + LLG SG+ +D Q + R
Sbjct: 52 TTGSSVVGIKFDGGVLVAADTLVSYGSLARYQDIQRVFKINNNILLGGSGDFADIQSIKR 111
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGM 143
N+D+ ++ D ++DG + P EL S+LTRV+YNRR++ +PL+ +V+GGV + G+ +LG
Sbjct: 112 NIDQKMIEDQCYNDGVIMKPGELASWLTRVLYNRRSRMNPLYIDVVVGGVDETGKPFLGN 171
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHE--NLSYEDGVKLLEKCMRVLLYRDRSAV 201
V M G + D VATGFG HLA P++R+ + + ++E+ L+ + M+VL YRD ++
Sbjct: 172 VDMRGRAYNDYVVATGFGRHLALPLVRERKPKDRDFTFEEATNLIRESMKVLYYRDTRSI 231
Query: 202 NKLQIAKITEEGTTISQPYALKTFWGF 228
+ + T +I P+ ++ W F
Sbjct: 232 PQYTVGICTAADCSIKGPFKVEENWTF 258
>gi|346321014|gb|EGX90614.1| proteasome component PRE4 [Cordyceps militaris CM01]
Length = 262
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/222 (39%), Positives = 138/222 (62%), Gaps = 10/222 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+ +K+KDG+++AAD SYGS R+ V+RIK S++G SG+
Sbjct: 30 PQSHTQQPIVTGTSVIGIKFKDGVVIAADNLASYGSLARFTDVQRIKTFQGKSVVGFSGD 89
Query: 76 ISDFQELLRNLDELILYDNMWDDGNS--LGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
+SD Q + ++L L D + +G L + LH YL +++YNRR+KFDPLW +++ G
Sbjct: 90 VSDMQYMDQHLTALA-NDEHYSNGEEPRLNAENLHRYLAKMLYNRRSKFDPLWVHILVAG 148
Query: 134 VK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLE 187
+ +G+ +LG ++G + +ATG+G LA+PI+R +E + L ED ++L++
Sbjct: 149 LNDDGRPFLGAADLLGTTYTSPSLATGYGAMLAQPIMRKRVPDEEAAQALEKEDAIQLIK 208
Query: 188 KCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
+CM VL YRD +++K +A IT++G +S L+ W F
Sbjct: 209 ECMEVLYYRDARSMDKYSMAVITKDGIDVSYDNTLEAQSWKF 250
>gi|401625897|gb|EJS43880.1| pre4p [Saccharomyces arboricola H-6]
Length = 266
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 132/204 (64%), Gaps = 10/204 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ VER+ P+G+++++G SG+
Sbjct: 30 PMANTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFSGVERLIPVGENTIVGISGD 89
Query: 76 ISDFQELLRNLDELIL---YDN-MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISD Q + R L++L+ YDN + DD +L P + YL VMY RR+K +PLWN++++
Sbjct: 90 ISDMQHIERLLEDLVTENAYDNPLADDEEALEPSHVFEYLATVMYQRRSKMNPLWNAIIV 149
Query: 132 GGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHE--NLSYEDGVKL 185
GV+ NG ++L V+++GV + +ATGFG H+A P+LR D + + + +
Sbjct: 150 AGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQTAEEA 209
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKI 209
+ MRVL YRD + +A I
Sbjct: 210 IVNAMRVLYYRDARSSRSFSLAII 233
>gi|118345684|ref|XP_976672.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila]
gi|89288089|gb|EAR86077.1| Proteasome A-type and B-type family protein [Tetrahymena
thermophila SB210]
Length = 289
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 124/211 (58%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TG+SV+ + + G+++A+D SYG RY ++R+ I + +SGE SDFQEL
Sbjct: 70 PITTGSSVIGIAFNGGVIIASDTSISYGGMSRYNHIQRVHKITDNCAFASSGEFSDFQEL 129
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
R +DE+ + DD + P++ +Y++++ Y+ RNK +PL+ V+GGV NG+ YL
Sbjct: 130 SRLIDEMTNQTYLNDDKINYTPRDYGNYISQLQYHHRNKMNPLYLWNVIGGVDNGKPYLA 189
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ + G E +HV+TGFGN+L P+ W ++S ++ +L+ C + L YRD A
Sbjct: 190 HIDLYGTYIETNHVSTGFGNYLCGPLFEKGWRADMSEQEAKQLVNTCFQALFYRDARAHE 249
Query: 203 KLQIAKITEEGTTISQPYALKTFWGFTAFQN 233
+Q+ I + G I QPY +++ W + + N
Sbjct: 250 TIQVTVIDKNGVRIEQPYEIESKWDYQGYVN 280
>gi|303313742|ref|XP_003066880.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240106547|gb|EER24735.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320032577|gb|EFW14529.1| proteasome component Pre4 [Coccidioides posadasii str. Silveira]
Length = 261
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 140/223 (62%), Gaps = 8/223 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSVVA+K+ G+ +AAD SYGS R++ V+R++ S++G G+
Sbjct: 29 PQTHTQSPIVTGTSVVAVKFDGGVAIAADNLASYGSLARFQDVKRLRAFDNSSVVGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDG-NSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+SD Q + R L+ L + +N G ++L K LH+YL++++Y RR++F+PLWN +++ G
Sbjct: 89 VSDMQYIDRLLNSLDIRENYSSYGQHTLNAKNLHTYLSKMLYRRRSEFNPLWNHILVAGF 148
Query: 135 -KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-----ENLSYEDGVKLLEK 188
++G+ +L ++G F +ATGFG HLA PILR + E+++ E V L++
Sbjct: 149 DQDGKPFLSSADLLGTTFSAPSLATGFGAHLAIPILRRLFPEGTPIESITKEQAVSALKE 208
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK-TFWGFTA 230
CM+VL YRD +++K IA IT++G + + L+ WGF +
Sbjct: 209 CMKVLYYRDARSLDKYSIAVITKDGVELKEDEQLEHQSWGFAS 251
>gi|366994946|ref|XP_003677237.1| hypothetical protein NCAS_0F04000 [Naumovozyma castellii CBS 4309]
gi|342303105|emb|CCC70884.1| hypothetical protein NCAS_0F04000 [Naumovozyma castellii CBS 4309]
Length = 265
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 91/229 (39%), Positives = 143/229 (62%), Gaps = 13/229 (5%)
Query: 12 GPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLG 71
P+ P TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ +ER+ P+GK++++G
Sbjct: 26 APSFPKMNTQQPIVTGTSVISMKYNNGVIIAADNLGSYGSLLRFTDIERLIPVGKNTIVG 85
Query: 72 ASGEISDFQELLRNLDELIL---YDNMW-DDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
SG+ISD Q + L+E+ YDN + D+ SL P + YL VMY+RR+K +PLWN
Sbjct: 86 ISGDISDMQHIEHLLEEIETENQYDNSFADNEESLQPSYVFEYLANVMYSRRSKMNPLWN 145
Query: 128 SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYED---- 181
+L++ GV++ + +L V+++GV + +ATGFG HLA P+LR + E+++ D
Sbjct: 146 ALIVAGVEDNKPFLRYVNLLGVTYSSPTLATGFGAHLAVPLLRRVIDREEDIAKTDLQTA 205
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKI-TEEGTTISQPYAL-KTFWGF 228
+LE M+VL YRD + K +A I ++G + + K W F
Sbjct: 206 KTTILE-AMKVLYYRDARSSRKFSLAIIDNDQGLIFEKDLQVEKMAWNF 253
>gi|157876370|ref|XP_001686541.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
Friedlin]
gi|157876376|ref|XP_001686544.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
Friedlin]
gi|157876382|ref|XP_001686547.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
Friedlin]
gi|157876389|ref|XP_001686550.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
Friedlin]
gi|157876395|ref|XP_001686553.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
Friedlin]
gi|157876401|ref|XP_001686556.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
Friedlin]
gi|157876408|ref|XP_001686559.1| putative proteasome beta 7 subunit [Leishmania major strain
Friedlin]
gi|23928432|gb|AAN40019.1| 20S proteasome beta 7 subunit [Leishmania major]
gi|68129615|emb|CAJ08173.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
Friedlin]
gi|68129618|emb|CAJ08176.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
Friedlin]
gi|68129621|emb|CAJ08179.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
Friedlin]
gi|68129624|emb|CAJ08183.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
Friedlin]
gi|68129627|emb|CAJ08186.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
Friedlin]
gi|68129630|emb|CAJ08189.1| 20s proteasome beta 7 subunit, (putative) [Leishmania major strain
Friedlin]
gi|68129633|emb|CAJ08192.1| putative proteasome beta 7 subunit [Leishmania major strain
Friedlin]
Length = 220
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 127/209 (60%), Gaps = 3/209 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
+G SV+A+KY G+LMAAD SYGS ++ ++ RIK +G HS + A+G +DFQ + +
Sbjct: 3 SGASVIAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGSHSAVCATGSYADFQMMAKQ 62
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+++ I M+ + + L P E+ SYL R +Y +R F+P +V GV++ + +L V
Sbjct: 63 VEDNIERQRMYYNVDELNPSEVFSYLHRSIYQKRCDFEPCLCQMVFIGVRDSETFLAAVD 122
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHEN---LSYEDGVKLLEKCMRVLLYRDRSAVN 202
+G +ED VATG+G ++A P+LR +N LS V++L C+RVL YR+ +N
Sbjct: 123 DVGTRWEDDCVATGYGAYIALPLLRQALEKNPGGLSRAQAVQILTDCLRVLFYRECRTIN 182
Query: 203 KLQIAKITEEGTTISQPYALKTFWGFTAF 231
K Q+A +G IS+P+ ++T W + F
Sbjct: 183 KFQMADAAGDGVRISEPFDVETNWEYEGF 211
>gi|115400898|ref|XP_001216037.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114189978|gb|EAU31678.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 260
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 133/221 (60%), Gaps = 7/221 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+ G+ +AAD SYGS R+ V+R++ +++G SG+
Sbjct: 29 PKAHTQSPAVTGTSVIAVKFNGGVAIAADNLASYGSLARFTDVKRLRVFSDSAIVGFSGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L + + +N GN L K LH+YL++V+Y RR++F+PLWN L++ G
Sbjct: 89 VSDMQYIDRLLQSIDIRENYSSHGNMLNAKNLHTYLSKVLYKRRSEFNPLWNHLLVVGFD 148
Query: 136 NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKC 189
+K +L ++G + H+ATGFG HLA PILR + E ++ E+ V L +C
Sbjct: 149 GDKKPFLSSADLLGTTYSAPHLATGFGAHLAIPILRRLFPEERPVEQITKEEAVAALREC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
++VL YRD +++K +A ITE G + + L+ W F
Sbjct: 209 LKVLWYRDARSLDKYSLAIITEGGIEMHEDQRLEAQSWAFA 249
>gi|401842282|gb|EJT44519.1| PRE4-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 266
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 133/207 (64%), Gaps = 10/207 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ VER+ P+G+++++G SG+
Sbjct: 30 PIANTQQPIVTGTSVISMKYNNGVIIAADNLGSYGSLLRFSGVERLIPVGENTVVGISGD 89
Query: 76 ISDFQELLRNLDELIL---YDN-MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISD Q + + L++L+ YDN + D +L P + YL VMY RR+K +PLWN++++
Sbjct: 90 ISDMQHIEKLLEDLVTENAYDNPLADTEEALEPSYVFEYLATVMYQRRSKMNPLWNAIIV 149
Query: 132 GGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPIL-----RDEWHENLSYEDGVKL 185
GV+ NG+++L V+++GV + +ATGFG H+A P+L R+ + + +
Sbjct: 150 AGVQSNGEQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQTAEEA 209
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEE 212
+ MRVL YRD + +A I +E
Sbjct: 210 MVNAMRVLYYRDARSSRSFSLAIIDKE 236
>gi|367013874|ref|XP_003681437.1| hypothetical protein TDEL_0D06420 [Torulaspora delbrueckii]
gi|359749097|emb|CCE92226.1| hypothetical protein TDEL_0D06420 [Torulaspora delbrueckii]
Length = 265
Score = 164 bits (414), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 93/230 (40%), Positives = 141/230 (61%), Gaps = 15/230 (6%)
Query: 12 GPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLG 71
P P TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ +ER+ P+GK++++G
Sbjct: 26 APAYPKMNTQQPIVTGTSVISMKYDNGVVIAADNLGSYGSLLRFTDIERLIPVGKNTVVG 85
Query: 72 ASGEISDFQELLRNLDELIL---YDNMW-DDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
SG+ISD Q + L+EL YDN + DD +L P + YL VMY RR+K +PLWN
Sbjct: 86 ISGDISDMQHIEHLLEELETENNYDNSYADDEEALRPSNVFEYLAAVMYQRRSKMNPLWN 145
Query: 128 SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-------DEWHENLSYE 180
+L++ GV++ + +L V+++GV + +ATGFG HLA P+LR D NL E
Sbjct: 146 ALIVAGVEDKKPFLRYVNLLGVTYSSPTLATGFGAHLAIPLLRRVIDHESDIQKTNL--E 203
Query: 181 DGVKLLEKCMRVLLYRDRSAVNKLQIAKI-TEEGTTISQPYALKTF-WGF 228
K + +CM++L YRD + K +A I ++G + ++ WGF
Sbjct: 204 TAEKTVVECMKILYYRDARSSRKYSLAIIDNDKGVIFKKGNEVENMTWGF 253
>gi|365760885|gb|EHN02570.1| Pre4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 266
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 133/207 (64%), Gaps = 10/207 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ VER+ P+G+++++G SG+
Sbjct: 30 PIANTQQPIVTGTSVISMKYNNGVIIAADNLGSYGSLLRFSGVERLIPVGENTVVGISGD 89
Query: 76 ISDFQELLRNLDELIL---YDN-MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISD Q + + L++L+ YDN + D +L P + YL VMY RR+K +PLWN++++
Sbjct: 90 ISDMQHIEKLLEDLVTENAYDNPLADAEEALEPSYVFEYLATVMYQRRSKMNPLWNAIIV 149
Query: 132 GGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPIL-----RDEWHENLSYEDGVKL 185
GV+ NG+++L V+++GV + +ATGFG H+A P+L R+ + + +
Sbjct: 150 AGVQSNGEQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQAAEEA 209
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEE 212
+ MRVL YRD + +A I +E
Sbjct: 210 MVNAMRVLYYRDARSSRSFSLAIIDKE 236
>gi|428671842|gb|EKX72757.1| proteasome subunit, putative [Babesia equi]
Length = 229
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 131/218 (60%), Gaps = 4/218 (1%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
YVTG+++V +KY+DG+L+AAD SYG R + ER++ + S+ +SG+ +D Q +
Sbjct: 4 YVTGSAIVGIKYRDGVLLAADTKLSYGRMSRVTNYERLEQVSPTSVFCSSGDAADHQYIS 63
Query: 84 RNLDELILYDNMWDDGN----SLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
+ L + + + + ++ + S+ K LH+Y+ RV Y RR+K DP+ ++ V+ G+ +G+
Sbjct: 64 KFLKKAVHNELLANNNDLSKVSMDAKMLHNYMARVFYARRSKLDPIVSAAVIAGISDGEP 123
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
+LG G + D + TGFG + A LR+E ++S E+ L +CMR+L RD +
Sbjct: 124 FLGYSDYYGTKYTDDFITTGFGKYFAIGPLREEHRADMSKEEATDLAIRCMRLLYLRDCT 183
Query: 200 AVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAG 237
A NK+QIA +T++G I +P+ + W F F PT+
Sbjct: 184 ASNKIQIAHVTKDGVVIQEPFFFDSKWHFEKFVKPTSA 221
>gi|241955579|ref|XP_002420510.1| proteasome beta-type subunit, putative [Candida dubliniensis CD36]
gi|223643852|emb|CAX41589.1| proteasome beta-type subunit, putative [Candida dubliniensis CD36]
Length = 278
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 136/210 (64%), Gaps = 14/210 (6%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P TQ P +TGTSV+A K+K+G++MAAD GSYGS +R+ ++ER+ +GK +++G S
Sbjct: 37 NFPKMNTQQPIITGTSVIASKFKNGVIMAADHVGSYGSLLRFNNIERLIKVGKETVVGIS 96
Query: 74 GEISDFQELLR----NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
G+ISD Q ++R E +YDN D G+ L +H YL+RV+YNRR+K +PLWN++
Sbjct: 97 GDISDLQYIVRLLDELEIEEEVYDN--DGGDYLRAPNVHEYLSRVLYNRRSKMNPLWNAV 154
Query: 130 VLGGV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSY-----EDGV 183
++GG K+ +L V ++GV + S +ATGFG+HLA P+LR+ E+ Y +
Sbjct: 155 IVGGFNKDRTPFLKYVDLLGVTYHASTIATGFGSHLAIPLLRNLIPEDKDYVKVDEQQVS 214
Query: 184 KLLEKCMRVLLYRD-RSAVN-KLQIAKITE 211
K +E M+VL YRD RS N + I KI E
Sbjct: 215 KAVEDSMKVLFYRDARSGENYSVVIIKIDE 244
>gi|90076880|dbj|BAE88120.1| unnamed protein product [Macaca fascicularis]
Length = 215
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 72/153 (47%), Positives = 115/153 (75%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPI 168
+G+ +LG V M+GV +E +ATG+G +LA+P+
Sbjct: 162 DGESFLGYVDMLGVAYEAPSLATGYGAYLAQPL 194
>gi|195453376|ref|XP_002073761.1| GK14279 [Drosophila willistoni]
gi|194169846|gb|EDW84747.1| GK14279 [Drosophila willistoni]
Length = 267
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 81/216 (37%), Positives = 130/216 (60%), Gaps = 3/216 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
+R TG+SV+ +++ +G+++AAD SYGS RY+ + R+ I + +LG SG+ +
Sbjct: 47 KRNTSSITTGSSVLGIRFDEGVMIAADTLVSYGSLARYQDIHRVFKINNNIILGGSGDFA 106
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KN 136
D Q + RN+D+ ++ D +DD ++ PKEL S+LTRV+Y RR++ +PL+ +V+GGV K
Sbjct: 107 DIQSIKRNIDQKMIEDQYYDDQITMKPKELSSWLTRVLYGRRSRMNPLYIDVVVGGVDKQ 166
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDE--WHENLSYEDGVKLLEKCMRVLL 194
G +LG V + G +ED VATGF HLA P++R+ + + ++ L+ KCM VL
Sbjct: 167 GVPFLGNVDLRGRAYEDYVVATGFARHLALPLVRERKPADRDFTAQEASDLIRKCMEVLY 226
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTA 230
YRD ++K + T + PY + W F A
Sbjct: 227 YRDTRNMSKYTVGVCTTSNCLVEGPYNVNENWTFAA 262
>gi|363754035|ref|XP_003647233.1| hypothetical protein Ecym_6008 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890870|gb|AET40416.1| hypothetical protein Ecym_6008 [Eremothecium cymbalariae
DBVPG#7215]
Length = 266
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 84/224 (37%), Positives = 135/224 (60%), Gaps = 10/224 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P +TGTSVV++KY +G+++AAD GSYGS +R+ +V R+ +G +++G SG+
Sbjct: 32 PSMNTQQPIITGTSVVSMKYNNGVIIAADGMGSYGSLLRFSNVNRLFVVGNSTVVGISGD 91
Query: 76 ISDFQELLRNLDELIL---YDNMW-DDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISD Q + R L+++ + YDN + + +L P + YLT +MY RR+K DPLWN++++
Sbjct: 92 ISDMQYIERLLEDMEIENNYDNAYAESSEALLPSYVFEYLTSLMYQRRSKMDPLWNAIIV 151
Query: 132 GGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLL 186
GV++G+++L V + GV + +ATGFG H+A P++R DE + + E K +
Sbjct: 152 AGVEDGKQFLKYVDLKGVRYSSPSLATGFGAHMAIPLMRKLVDNDEDVKQIDLETAKKAI 211
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTF-WGFT 229
CM+VL YRD + +A I + Q ++ W F
Sbjct: 212 LDCMKVLFYRDARSSRSFSLAVIDRDSGVDLQKLEVENMTWSFA 255
>gi|255732587|ref|XP_002551217.1| proteasome component PRE4 [Candida tropicalis MYA-3404]
gi|240131503|gb|EER31063.1| proteasome component PRE4 [Candida tropicalis MYA-3404]
Length = 278
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 91/212 (42%), Positives = 134/212 (63%), Gaps = 12/212 (5%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P TQ P VTGTSVVA K+K+GI+MAAD GSYGS +R+ ++ER+ +GK +++G S
Sbjct: 37 NFPKMNTQQPIVTGTSVVASKFKNGIIMAADHVGSYGSLLRFNNIERLIKVGKETVVGIS 96
Query: 74 GEISDFQELLR----NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
G+ISD Q + R E +YDN D G+ L +H YL+RV+YNRR+K +PLWN++
Sbjct: 97 GDISDLQYIQRLLDELEIEEEVYDN--DGGDYLRAPNVHEYLSRVLYNRRSKMNPLWNAI 154
Query: 130 VLGGV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSY-----EDGV 183
++GG K+ +L V ++GV + S +ATGFG H+A P+LR+ E+ + E
Sbjct: 155 IVGGFEKDRTPFLKYVDLLGVTYHSSTIATGFGAHMALPLLRNLIPEDKDFVKVNEEQIS 214
Query: 184 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGTT 215
K +E MRVL YRD + ++ + I + +T
Sbjct: 215 KAVEDSMRVLYYRDARSGDQYSVVIIKIDEST 246
>gi|295672926|ref|XP_002797009.1| proteasome component PRE4 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282381|gb|EEH37947.1| proteasome component PRE4 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 260
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 132/203 (65%), Gaps = 6/203 (2%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
TQ P VTGTSV+A+K+ G+ +AAD SYGS R+ ++R++ +++LG G++SD
Sbjct: 33 TQSPIVTGTSVIAVKFNGGVAIAADNLASYGSLARFTDIKRLRSFHNNAVLGFGGDVSDM 92
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQ 138
Q + R L L + +N G++L + LH+YL+++MY RR++F+PLWN++++ G NGQ
Sbjct: 93 QFIDRLLTSLDIDENYSTYGHTLNAQNLHTYLSKLMYRRRSQFNPLWNNILVAGFDTNGQ 152
Query: 139 KYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKCMRVL 193
+L V ++G + +ATGFG HLA P+LR D E ++ E+ VK L++C++VL
Sbjct: 153 PFLSSVDLLGSTYSAPSLATGFGAHLAIPVLRRLFPEDRPLEQITEEEAVKALKECLKVL 212
Query: 194 LYRDRSAVNKLQIAKITEEGTTI 216
YRD + ++ IA + ++G ++
Sbjct: 213 FYRDARSTDRYSIAVVKKDGVSL 235
>gi|119185118|ref|XP_001243375.1| hypothetical protein CIMG_07271 [Coccidioides immitis RS]
gi|392866255|gb|EAS28867.2| proteasome component Pre4 [Coccidioides immitis RS]
Length = 261
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 140/223 (62%), Gaps = 8/223 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSVVA+K+ G+ +AAD SYGS R++ V+R++ S++G G+
Sbjct: 29 PQTHTQSPIVTGTSVVAVKFDGGVAIAADNLASYGSLARFQDVKRLRVFDNSSVVGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDG-NSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+SD Q + R L+ L + +N G ++L K LH+YL++++Y RR++F+PLWN +++ G
Sbjct: 89 VSDMQYIDRLLNSLDIRENYSSYGQHTLNAKNLHTYLSKMLYRRRSEFNPLWNHILVAGF 148
Query: 135 -KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-----ENLSYEDGVKLLEK 188
++G+ +L ++G F +ATGFG HLA PILR + E+++ E V L++
Sbjct: 149 DQDGKPFLSSADLLGTTFSAPSLATGFGAHLAIPILRRLFPEGTPIESITKEQAVSALKE 208
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK-TFWGFTA 230
CM+VL YRD ++++ IA IT++G + + L+ WGF +
Sbjct: 209 CMKVLYYRDARSLDRYSIAVITKDGVELKEDEQLEHQSWGFAS 251
>gi|195497298|ref|XP_002096040.1| GE25292 [Drosophila yakuba]
gi|194182141|gb|EDW95752.1| GE25292 [Drosophila yakuba]
Length = 268
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 129/206 (62%), Gaps = 3/206 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TG+SV+ ++Y +G+++AAD SYGS RY+++ER+ I K+ LLG SG+ +D Q + RN
Sbjct: 56 TGSSVLGIRYDEGVMLAADTLVSYGSLARYQNIERVFKINKNILLGGSGDFADIQSIKRN 115
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN-GQKYLGMV 144
+D+ ++ D DD + PK L S++TRV+YNRR++ +PL+ +V+GGV N G YL V
Sbjct: 116 IDQKMIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANV 175
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYE--DGVKLLEKCMRVLLYRDRSAVN 202
+ G + ED VATGF HLA P++R++ ++ + + +L+ CM VL YRD ++
Sbjct: 176 DLRGRSHEDYVVATGFARHLAIPLVREKKPKDRDFTVVEAAELIRTCMEVLYYRDTRNIS 235
Query: 203 KLQIAKITEEGTTISQPYALKTFWGF 228
+ + + G + P+ + W F
Sbjct: 236 QYTVGVCSLNGCGVEGPFQVNENWTF 261
>gi|149238401|ref|XP_001525077.1| proteasome component PRE4 [Lodderomyces elongisporus NRRL YB-4239]
gi|146451674|gb|EDK45930.1| proteasome component PRE4 [Lodderomyces elongisporus NRRL YB-4239]
Length = 289
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 129/206 (62%), Gaps = 11/206 (5%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P +TGTSV+A K+ +GI+MAAD GSYGS +R+ +++R+ +G +++G SG+
Sbjct: 44 PKMNTQQPIITGTSVIASKFSNGIIMAADHVGSYGSLLRFNNIQRLIRVGSETVVGISGD 103
Query: 76 ISDFQEL----LRNLDELILYDNMWDDGNS-LGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
ISD Q + E +YDN D N+ L +H YL+RVMYNRR+K +PLWNS+V
Sbjct: 104 ISDLQYIERLLDELEIEEEVYDNEADGANAFLRAPNVHEYLSRVMYNRRSKMNPLWNSIV 163
Query: 131 LGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSY-----EDGVK 184
+GG + +K +L V ++GV + S +ATGFG+HLA P+LR E+ Y + K
Sbjct: 164 VGGFDSERKPFLKYVDLLGVTYHASTIATGFGSHLAIPLLRQLIPEDKDYVKVNETEARK 223
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKIT 210
+++ CMRVL YRD + + IT
Sbjct: 224 VVDDCMRVLFYRDARSGEQFSRVVIT 249
>gi|302414586|ref|XP_003005125.1| proteasome component PRE4 [Verticillium albo-atrum VaMs.102]
gi|261356194|gb|EEY18622.1| proteasome component PRE4 [Verticillium albo-atrum VaMs.102]
Length = 276
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 138/241 (57%), Gaps = 23/241 (9%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
+ PN P Q TQ P VTGTSV+A+KY +G+++AAD SYGS R+ +V+R++ + +++
Sbjct: 24 MNPNGPNQATQSPIVTGTSVIAIKYSEGVVIAADNLASYGSLARFTNVKRLRTFAESTVI 83
Query: 71 GASGEISDFQELLRNLDELIL------------YDNMWDDGNSLGPK----ELHSYLTRV 114
G G++SD Q L R+L L + D + D + P+ LH YL ++
Sbjct: 84 GFGGDVSDMQYLDRHLTSLAINESYGSPAITASADTLDGDADKARPRLNAANLHKYLAKL 143
Query: 115 MYNRRNKFDPLWNSLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR--- 170
Y RR KFDPLWN +++ GV + K +L ++G F +ATGFG+ LA+PI+R
Sbjct: 144 FYARRTKFDPLWNHVLVAGVDDDDKPFLAAADLLGTTFSAPSLATGFGSMLAQPIMRRSA 203
Query: 171 --DEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWG 227
+E L+ + ++++CM+VL YRD +++ IA +T++G + + L K W
Sbjct: 204 PDEESAAKLTRQQAEDVIKECMKVLYYRDARSLDSYSIAVVTKDGVELKEDEKLEKQSWA 263
Query: 228 F 228
F
Sbjct: 264 F 264
>gi|402549391|ref|XP_003888469.1| 20s proteasome beta 7 subunit, (putative) [Leishmania infantum
JPCM5]
gi|356578832|emb|CBZ39905.1| 20s proteasome beta 7 subunit, (putative) [Leishmania infantum
JPCM5]
Length = 220
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 126/209 (60%), Gaps = 3/209 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
+G SV+A+KY G+LMAAD SYGS ++ ++ RIK +G HS + A+G +DFQ + +
Sbjct: 3 SGGSVIAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGSHSAVCATGSYADFQMMTKQ 62
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+++ I M+ + + L P E+ SYL R +Y +R F+P +V G ++ + +L V
Sbjct: 63 VEDNIERQRMYHNVDELSPSEVFSYLHRSIYQKRCDFEPCLCQMVFIGFRDSETFLAGVD 122
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHEN---LSYEDGVKLLEKCMRVLLYRDRSAVN 202
+G +ED VATG+G ++A P+LR +N LS V++L C+RVL YR+ +N
Sbjct: 123 DVGTRWEDDCVATGYGAYIALPLLRQALEKNPSGLSRAQAVQILTDCLRVLFYRECRTIN 182
Query: 203 KLQIAKITEEGTTISQPYALKTFWGFTAF 231
K Q+A +G IS+P+ ++T W + F
Sbjct: 183 KFQMADAASDGVRISEPFDVETNWEYEGF 211
>gi|240273180|gb|EER36702.1| 20S proteasome subunit [Ajellomyces capsulatus H143]
Length = 260
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 135/220 (61%), Gaps = 7/220 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+ G+ +A D SYGS R+ ++R++ +++G G+
Sbjct: 29 PQTHTQSPTVTGTSVIAVKFNGGVAIATDNLASYGSLARFTDIKRLRSFDNSTVIGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L+ L + +N G+SL + LH+YL+++MY RR++F+PLWN +++ G
Sbjct: 89 VSDMQYIDRVLNFLSIEENYSTYGHSLNAQNLHTYLSKMMYRRRSEFNPLWNVILVAGFD 148
Query: 136 NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-----ENLSYEDGVKLLEKC 189
+ +K +L V ++G + H+ATGFG HLA P+LR + EN+ E V+ L++C
Sbjct: 149 SEEKPFLSSVDLLGNTYSAPHLATGFGAHLAIPVLRRLFPEEVPLENVKEEQAVRALQEC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
M+VL YRD + ++ IA + ++G + + L+ W F
Sbjct: 209 MKVLFYRDARSTDRYSIAVVKKDGVEMKENERLENQSWAF 248
>gi|325089205|gb|EGC42515.1| 20S proteasome subunit [Ajellomyces capsulatus H88]
Length = 260
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 135/220 (61%), Gaps = 7/220 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+ G+ +A D SYGS R+ ++R++ +++G G+
Sbjct: 29 PQTHTQSPTVTGTSVIAVKFNGGVAIATDNLASYGSLARFTDIKRLRSFDNSTVIGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L+ L + +N G+SL + LH+YL+++MY RR++F+PLWN +++ G
Sbjct: 89 VSDMQYIDRVLNFLSIEENYSTYGHSLNAQNLHTYLSKMMYRRRSEFNPLWNVILVAGFD 148
Query: 136 NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-----ENLSYEDGVKLLEKC 189
+ +K +L V ++G + H+ATGFG HLA P+LR + EN+ E V+ L++C
Sbjct: 149 SEEKPFLSSVDLLGNTYSAPHLATGFGAHLAIPVLRRLFPEEVPLENVKEEQAVRALQEC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
M+VL YRD + ++ IA + ++G + + L+ W F
Sbjct: 209 MKVLFYRDARSTDRYSIAVVKKDGVEMKENERLENQSWAF 248
>gi|154278908|ref|XP_001540267.1| proteasome component Pre4 [Ajellomyces capsulatus NAm1]
gi|150412210|gb|EDN07597.1| proteasome component Pre4 [Ajellomyces capsulatus NAm1]
Length = 260
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 135/220 (61%), Gaps = 7/220 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+ G+ +A D SYGS R+ ++R++ ++LG G+
Sbjct: 29 PQTHTQSPKVTGTSVIAVKFNGGVAIATDNLASYGSLARFTDIKRLRSFDNSTVLGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L+ L + +N G+SL + LH+YL+++MY RR++F+PLWN +++ G
Sbjct: 89 VSDMQYIDRVLNFLSIEENYSTYGHSLNAQNLHTYLSKMMYRRRSEFNPLWNVILVAGFD 148
Query: 136 NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-----ENLSYEDGVKLLEKC 189
+ +K +L V ++G + H+ATGFG HLA P+LR + EN+ E V+ L++C
Sbjct: 149 SEEKPFLSSVDLLGNTYSAPHLATGFGAHLAIPVLRRLFPEEVPLENVQEEQAVRSLKEC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK-TFWGF 228
M+VL YRD + ++ IA + ++G + + L+ W F
Sbjct: 209 MKVLFYRDARSTDRYSIAVVKKDGVEMKENERLEDQSWAF 248
>gi|393215025|gb|EJD00517.1| N-terminal nucleophile aminohydrolase [Fomitiporia mediterranea
MF3/22]
Length = 169
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/157 (46%), Positives = 111/157 (70%), Gaps = 4/157 (2%)
Query: 76 ISDFQELLRNLDELILYDNMW-DDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+SDFQ + + LD+L++ + DDG+ LGP E+H YL++VMY RR+KFDPLWN++++GG
Sbjct: 1 MSDFQYIQQTLDDLLIEEETTKDDGHKLGPAEIHEYLSQVMYRRRSKFDPLWNAILVGGF 60
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR---DEWHENLSYEDGVKLLEKCMR 191
K+GQ++L V ++GV + S +ATGFG H+A P++R + + L+ +D LLE+CM+
Sbjct: 61 KDGQRFLAYVDLLGVTYSASTIATGFGAHIALPLMRSAVEGREDTLTEDDARALLEQCMK 120
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
VL YRD ++NK QIA IT +G IS+ + +T W F
Sbjct: 121 VLFYRDARSLNKYQIATITADGPRISESKSAQTEWAF 157
>gi|346979383|gb|EGY22835.1| proteasome component PRE4 [Verticillium dahliae VdLs.17]
Length = 276
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/241 (35%), Positives = 138/241 (57%), Gaps = 23/241 (9%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
+ PN P Q +Q P VTGTSV+A+KY +G+++AAD SYGS R+ +V+R++ + +++
Sbjct: 24 MNPNGPNQASQSPIVTGTSVIAIKYSEGVVIAADNLASYGSLARFTNVKRLRTFAESTVI 83
Query: 71 GASGEISDFQELLRNLDELIL------------YDNMWDDGNSLGPK----ELHSYLTRV 114
G G++SD Q L R+L L + D + D + P+ LH YL ++
Sbjct: 84 GFGGDVSDMQYLDRHLTSLAIDESYGSPAITASADTLDGDADKARPRLNAANLHKYLAKL 143
Query: 115 MYNRRNKFDPLWNSLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR--- 170
Y RR KFDPLWN +++ GV + K +L ++G F +ATGFG+ LA+PI+R
Sbjct: 144 FYARRTKFDPLWNHVLVAGVDDDDKPFLAAADLLGTTFSAPSLATGFGSMLAQPIMRRSA 203
Query: 171 --DEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWG 227
+E L+ + ++++CM+VL YRD +++ IA +T++G + + L K W
Sbjct: 204 PDEESAAKLTRQQAEDVIKECMKVLYYRDARSLDSYSIAVVTKDGVELKEDEKLEKQSWA 263
Query: 228 F 228
F
Sbjct: 264 F 264
>gi|225554387|gb|EEH02686.1| 20S proteasome subunit [Ajellomyces capsulatus G186AR]
Length = 260
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 134/220 (60%), Gaps = 7/220 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+ G+ +A D SYGS R+ ++R++ +++G G+
Sbjct: 29 PQTHTQSPTVTGTSVIAVKFNGGVAIATDNLASYGSLARFTDIKRLRSFDNSTVIGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+SD Q + R L+ L + +N G+SL + LH+YL+++MY RR++F+PLWN +++ G
Sbjct: 89 VSDMQYIDRVLNFLSIEENYSTYGHSLNAQNLHTYLSKMMYRRRSEFNPLWNVILVAGFD 148
Query: 136 NGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH-----ENLSYEDGVKLLEKC 189
+K +L V ++G + H+ATGFG HLA P+LR + EN+ E V+ L++C
Sbjct: 149 GEEKPFLSSVDLLGNTYSAPHLATGFGAHLAIPVLRRLFPEEVPLENVKEEQAVRALQEC 208
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
M+VL YRD + ++ IA + ++G + + L+ W F
Sbjct: 209 MKVLFYRDARSTDRYSIAVVKKDGVEMKENERLENQSWAF 248
>gi|254583237|ref|XP_002499350.1| ZYRO0E09724p [Zygosaccharomyces rouxii]
gi|238942924|emb|CAR31095.1| ZYRO0E09724p [Zygosaccharomyces rouxii]
Length = 261
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/206 (38%), Positives = 132/206 (64%), Gaps = 9/206 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ +VER+ P+G ++++G SG+
Sbjct: 26 PKMNTQQPIVTGTSVLSVKYNNGVVIAADNLGSYGSLLRFNNVERLIPVGDNTVVGISGD 85
Query: 76 ISDFQELLRNLDELIL---YDNMWDDG-NSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISD Q + ++EL+ YDN + D L P + YL VMY+RR+KF+PLWN++++
Sbjct: 86 ISDMQHIETLIEELVTENNYDNSFADSVEGLKPSYVFEYLAAVMYHRRSKFNPLWNAIIV 145
Query: 132 GGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPIL-----RDEWHENLSYEDGVKLL 186
GV++G+ + V+++GV + +ATGFG+++A P+L RD L + +
Sbjct: 146 AGVEDGKPFSRYVNLLGVTYSSPSLATGFGSYMAVPLLRKLVDRDSDVAKLDLQTAENAI 205
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEE 212
+C++VL YRD + + +A I +
Sbjct: 206 VECLKVLFYRDARSSKQYSLAIIDND 231
>gi|449267768|gb|EMC78672.1| Proteasome subunit beta type-4, partial [Columba livia]
Length = 180
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 71/173 (41%), Positives = 119/173 (68%), Gaps = 2/173 (1%)
Query: 56 KSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVM 115
+ + R+ + ++LGASG+ +DFQ L + +D++++ + + DG+S PK +HS+LTRVM
Sbjct: 1 RGISRLLKVNDTTMLGASGDYADFQYLKQIIDQMVIDEELLGDGHSYSPKAIHSWLTRVM 60
Query: 116 YNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EW 173
YNRR+K +PLWN++V+GG NG+ +LG V M+GV +E +ATG+G +LA+P++R+ E
Sbjct: 61 YNRRSKINPLWNTVVIGGFYNGESFLGYVDMLGVAYEAPTLATGYGAYLAQPLMREVLEK 120
Query: 174 HENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
L+ E+ L+E+CM++L YRD + N+ ++A TE+G + P L+ W
Sbjct: 121 KPVLTREEARDLIERCMKILYYRDARSFNRYEVATATEKGVEVEGPLTLEANW 173
>gi|116192559|ref|XP_001222092.1| hypothetical protein CHGG_05997 [Chaetomium globosum CBS 148.51]
gi|88181910|gb|EAQ89378.1| hypothetical protein CHGG_05997 [Chaetomium globosum CBS 148.51]
Length = 275
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 88/235 (37%), Positives = 136/235 (57%), Gaps = 22/235 (9%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+KDG+++AAD SYGS R+ V+R++ S++G G+
Sbjct: 29 PKTATQSPIVTGTSVIAIKFKDGVVIAADNLASYGSLARFTDVKRLRTFLSTSVVGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPK---------------ELHSYLTRVMYNRRN 120
+SD Q L R+L+EL + + D S G + LH YL ++MY RR+
Sbjct: 89 VSDMQFLDRHLNELAIDEAYEHDIVSTGAEADQPTGSAAGQLNAANLHKYLAKLMYRRRS 148
Query: 121 KFDPLWNSLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWH 174
FDPLWN +++ G K +L V + G F +ATGFG LA+PI+R +E
Sbjct: 149 DFDPLWNQVLVAGFDAQAKPFLASVDLRGTTFTSPSLATGFGAMLAQPIMRRFAATEEDA 208
Query: 175 ENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGF 228
L+ ++ V ++++CM+VL YRD ++++ IA +T++G +S+ L K W F
Sbjct: 209 ARLTRDEAVNVVKECMKVLFYRDARSLDRYSIAVVTKDGVELSEDEQLEKQSWAF 263
>gi|403217316|emb|CCK71810.1| hypothetical protein KNAG_0I00190 [Kazachstania naganishii CBS
8797]
Length = 265
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 89/228 (39%), Positives = 138/228 (60%), Gaps = 11/228 (4%)
Query: 12 GPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLG 71
P+ P TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ +ER+ P+GK++++G
Sbjct: 26 APSFPKMNTQQPIVTGTSVISMKYNNGVIIAADHLGSYGSLLRFTDIERLFPVGKNTVVG 85
Query: 72 ASGEISDFQELLRNLDELIL---YDNMW-DDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
SG+ISD Q + L+EL YDN DD SL P + YL VMY RR+K +PLWN
Sbjct: 86 ISGDISDMQHIEALLEELETENNYDNSHADDEESLQPSYVFEYLATVMYQRRSKMNPLWN 145
Query: 128 SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPIL-----RDEWHENLSYEDG 182
+L++ GV++ + +L V+++GV + +ATGFG HLA P+L R+ E +
Sbjct: 146 ALIVAGVEDSKPFLKYVNLLGVTYSSPTLATGFGAHLAVPLLRRVVDRESDVEKTDMQTA 205
Query: 183 VKLLEKCMRVLLYRDRSAVNKLQIAKI-TEEGTTISQPYALKTF-WGF 228
+ + M+VL YRD + K +A I ++G ++ ++ W F
Sbjct: 206 TDTILQAMKVLYYRDARSSRKFSMAIIDNDQGLVFNKELEVENMKWNF 253
>gi|50307191|ref|XP_453574.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642708|emb|CAH00670.1| KLLA0D11506p [Kluyveromyces lactis]
Length = 265
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 142/227 (62%), Gaps = 11/227 (4%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N+P TQ P +TGTSV+++KY +G+++AAD G+YGS +R+ + ER+ +G ++++G S
Sbjct: 28 NNPKMNTQNPIITGTSVISIKYNNGVIVAADNLGAYGSLLRFTNEERLIKVGPNTVVGVS 87
Query: 74 GEISDFQELLRNLDELIL---YDNMW-DDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
G+ISD Q + LDE+ + YD+ + D+ L P + YL+ VMY RR+K DPLWN++
Sbjct: 88 GDISDMQYIQHLLDEMEIENNYDSAYADNEEQLKPSFVFEYLSSVMYQRRSKLDPLWNAI 147
Query: 130 VLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVK 184
++GG ++G+ +L V+++GV + +ATGFG HLA P+LR ++ E ++ + K
Sbjct: 148 IVGGTEDGKPFLRYVNLLGVTYSSPTLATGFGAHLALPLLRKLVDTEKDVEKVNLDVAKK 207
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKITEE-GTTISQPYALKTF-WGFT 229
+ + M++L YRD + K +A I E G I + ++ W F
Sbjct: 208 AILEAMKILYYRDARSSRKFSLAIIDNELGLNIEKDLQVENMSWEFA 254
>gi|124088088|ref|XP_001346958.1| Proteasome subunit [Paramecium tetraurelia strain d4-2]
gi|145474683|ref|XP_001423364.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057347|emb|CAH03331.1| Proteasome subunit, putative [Paramecium tetraurelia]
gi|124390424|emb|CAK55966.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 129/216 (59%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
Q T P VTG SV+AL Y G+++ D SYGS +K+V++I I K+++ +SGE S
Sbjct: 12 QHTTSPVVTGGSVIALVYNGGVIVGTDTLCSYGSMAAFKNVKKIAQISKNTIYASSGEFS 71
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ++++ L ++ +DDG PK+ ++L R+ Y +R K +PL+ V+ G NG
Sbjct: 72 DFQQVVKELAKIDRSALQYDDGVHPSPKDYGNFLARLSYKKRCKINPLYLQNVIAGFHNG 131
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
++YL +V + G E + + TGF ++ + I+ + W+EN + + +++ +C +VL RD
Sbjct: 132 ERYLSLVDIYGTYLESNFITTGFASYFCKAIISNYWNENCTLDQAKQVIRECFKVLFCRD 191
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQN 233
A + +Q+A + +G I +P ++T W F F++
Sbjct: 192 CRAHDVIQLAYVDAQGAHIEEPERVETKWDFNGFKS 227
>gi|195054248|ref|XP_001994038.1| GH22652 [Drosophila grimshawi]
gi|193895908|gb|EDV94774.1| GH22652 [Drosophila grimshawi]
Length = 265
Score = 160 bits (404), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 130/207 (62%), Gaps = 3/207 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TG+SVV ++Y G+L+AAD SYGS RY++++R+ I LLG SG+ +D Q + R+
Sbjct: 53 TGSSVVGIRYAGGVLVAADTLVSYGSLARYQNIDRVFKINDKILLGGSGDFADIQSIKRS 112
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMV 144
+D+ ++ D +DG + PK L S+LTRV+YNRR++ +PL+ +V+ GV + G +LG V
Sbjct: 113 IDQKMIEDQCCNDGVVMKPKSLASWLTRVLYNRRSRMNPLYIDVVVAGVDEAGVPFLGNV 172
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDE--WHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ G ++D VATGFG HLA P++R+ + ++E+ L+ +CM+VL YRD ++
Sbjct: 173 DLRGRAYDDYVVATGFGRHLALPLVRERKPKDRDFTFEEASNLIRECMKVLYYRDTRSIP 232
Query: 203 KLQIAKITEEGTTISQPYALKTFWGFT 229
+ + + ++ P+ ++ W F
Sbjct: 233 QYTVGICSASDCSVKGPFKVEENWTFA 259
>gi|448098741|ref|XP_004198988.1| Piso0_002386 [Millerozyma farinosa CBS 7064]
gi|359380410|emb|CCE82651.1| Piso0_002386 [Millerozyma farinosa CBS 7064]
Length = 275
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/205 (40%), Positives = 135/205 (65%), Gaps = 8/205 (3%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P +TGTSV+A+K+KDG++MAAD G+YGS +R+ ++ERI +G +++G SG+
Sbjct: 41 PSMHTQQPIITGTSVLAVKFKDGVIMAADNVGAYGSLLRFSNIERIIQVGDQTVVGISGD 100
Query: 76 ISDFQELLRNLDELILYDNMWDD--GNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
ISD Q + R L+EL ++++D G+ L +H YL++VMYNRR+K +PLWN++V+ G
Sbjct: 101 ISDMQYIERLLEELETEEDVYDSDGGHKLRAPHVHEYLSQVMYNRRSKMNPLWNAIVVAG 160
Query: 134 VKN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLE 187
+ + +L V + GV + S +ATGFG++LA P+LR D + +S ED + +
Sbjct: 161 FDDTNEPFLRYVDLFGVAYGSSAIATGFGSYLAVPLLRNLVPYDADYPKVSEEDAREAIV 220
Query: 188 KCMRVLLYRDRSAVNKLQIAKITEE 212
CM+VL YRD + +K + + ++
Sbjct: 221 NCMKVLYYRDARSSDKFSLVTLKKD 245
>gi|157115065|ref|XP_001652543.1| proteasome subunit beta type [Aedes aegypti]
gi|108877077|gb|EAT41302.1| AAEL007049-PA [Aedes aegypti]
Length = 270
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 85/215 (39%), Positives = 130/215 (60%), Gaps = 7/215 (3%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QR+ P TGTSVV LK+ +G+++AAD SYGS R+ V+R+ I +++G G+ +
Sbjct: 48 QRSYTPVTTGTSVVGLKFANGVVIAADKLVSYGSLARFHDVDRVYKINDKTIIGIGGDFA 107
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ + R++D+ ++ D D N L PK L+++LTRVMYNRR F PL+ +V+GG+++G
Sbjct: 108 DFQYIKRHIDQKVVDDMCLADKNELKPKSLYNWLTRVMYNRRCDFKPLYLDIVVGGMQDG 167
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN------LSYEDGVKLLEKCMR 191
+ +LG V++ G + + VATG+G HLA P+LR E+ EN L + +L + M
Sbjct: 168 EPFLGHVNLRGRAYTSNVVATGYGTHLALPLLR-EYSENPTAYAGLDKQKASELTKSVME 226
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
VL YRD + K A T +G + +K W
Sbjct: 227 VLWYRDCRSDPKYSQAICTTDGVQVDANCFVKQNW 261
>gi|45198776|ref|NP_985805.1| AFR258Wp [Ashbya gossypii ATCC 10895]
gi|44984786|gb|AAS53629.1| AFR258Wp [Ashbya gossypii ATCC 10895]
gi|374109036|gb|AEY97942.1| FAFR258Wp [Ashbya gossypii FDAG1]
Length = 262
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 134/226 (59%), Gaps = 14/226 (6%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P Q TQ P VTGTSV+A+KY +G ++AAD GSYGS +R+ ++R+ +G+ +++G SG+
Sbjct: 28 PSQHTQQPIVTGTSVIAMKYNNGTIIAADRLGSYGSLLRFTDMDRLFAVGESTVVGVSGD 87
Query: 76 ISDFQELLRNLDELIL---YDNMWDDG-NSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
+SD Q L R L ++ + YDN DG +L P + YL +MY RR+K +PLWN++++
Sbjct: 88 VSDMQYLQRLLQDMEIENNYDNSHADGAEALKPSYIFEYLASLMYQRRSKLNPLWNAIIV 147
Query: 132 GGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-------DEWHENLSYEDGVK 184
GV++GQ +L V + GV + +ATGFG H+A P++R D +LS
Sbjct: 148 AGVEDGQAFLRYVDLKGVKYSAPSLATGFGAHMAIPLMRKVADAEKDVAGVDLSIARATI 207
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKI-TEEGTTISQPYALKTFWGFT 229
L + M+VL YRD + + +A I + G ++ Q WGF
Sbjct: 208 L--ESMKVLFYRDARSSRRFSLAIIDNDAGVSMEQLEVENMTWGFA 251
>gi|323309277|gb|EGA62498.1| Pre4p [Saccharomyces cerevisiae FostersO]
Length = 294
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 132/204 (64%), Gaps = 10/204 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ VER+ P+G ++++G SG+
Sbjct: 30 PMVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGD 89
Query: 76 ISDFQELLRNLDELIL---YDN-MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISD Q + R L++L+ YDN + D +L P + YL VMY RR+K +PLWN++++
Sbjct: 90 ISDMQHIERLLEDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIV 149
Query: 132 GGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEW-HENLSYEDGVKLLEK- 188
GV+ NG ++L V+++GV + +ATGFG H+A P+LR E+ + V++ E+
Sbjct: 150 AGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEA 209
Query: 189 ---CMRVLLYRDRSAVNKLQIAKI 209
MRVL YRD + +A I
Sbjct: 210 IVNAMRVLYYRDARSSRNFSLAII 233
>gi|349577967|dbj|GAA23134.1| K7_Pre4p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 266
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 132/204 (64%), Gaps = 10/204 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ VER+ P+G ++++G SG+
Sbjct: 30 PMVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGD 89
Query: 76 ISDFQELLRNLDELIL---YDN-MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISD Q + R L++L+ YDN + D +L P + YL VMY RR+K +PLWN++++
Sbjct: 90 ISDMQHIERLLEDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIV 149
Query: 132 GGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEW-HENLSYEDGVKLLEK- 188
GV+ NG ++L V+++GV + +ATGFG H+A P+LR E+ + V++ E+
Sbjct: 150 AGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEA 209
Query: 189 ---CMRVLLYRDRSAVNKLQIAKI 209
MRVL YRD + +A I
Sbjct: 210 IVNAMRVLYYRDARSSRNFSLAII 233
>gi|225710708|gb|ACO11200.1| Proteasome subunit beta type-4 precursor [Caligus rogercresseyi]
Length = 258
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 133/230 (57%), Gaps = 6/230 (2%)
Query: 12 GPND--PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSL 69
P D P + P TG+SV +KY+ G+L+ AD SYG RY R+ + + ++
Sbjct: 28 APQDRAPTSVSAYPIATGSSVFGIKYEGGVLLGADTLVSYGKMARYPGTPRLYKVNETTV 87
Query: 70 LGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
+ SG+ +DFQ + ++ + + + ++ + P+ LH YLTR +YN R+KFDP W ++
Sbjct: 88 ITCSGDFADFQCITALVERMQIEEERTNNEVVMQPRSLHRYLTRYLYNLRSKFDPKWTNI 147
Query: 130 VLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN----LSYEDGVKL 185
V+GG+++G+ YLG VSMIG+ F + V TG G +A P++R +N L++++ K+
Sbjct: 148 VVGGLQDGEPYLGYVSMIGLAFTEEAVTTGLGGAVALPLIRKHLDQNSGRMLTFQEATKI 207
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPT 235
+E+ +++ D A K QIA IT+EG I +P +K W + N T
Sbjct: 208 MEESIKLGFALDCVAYPKYQIANITKEGVHIGEPETVKLNWKYVKNFNAT 257
>gi|237844335|ref|XP_002371465.1| proteasome A-type and B-type domain-containing protein [Toxoplasma
gondii ME49]
gi|211969129|gb|EEB04325.1| proteasome A-type and B-type domain-containing protein [Toxoplasma
gondii ME49]
gi|221481258|gb|EEE19655.1| proteasome A-type and B-type domain-containing protein, putative
[Toxoplasma gondii GT1]
Length = 266
Score = 159 bits (402), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/245 (33%), Positives = 132/245 (53%), Gaps = 13/245 (5%)
Query: 4 IQAKQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKP 63
++A P + T +P VT +SV+ + Y +GIL+ AD SYG R+K R
Sbjct: 12 MKATTEDAAPGFAPKDTTVPIVTTSSVLGITYNNGILLVADTLASYGRMTRFKDASRFFT 71
Query: 64 IGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFD 123
+G H+ + ++G+ SD Q + R L L D + DD + + + L+R+MY +R++ D
Sbjct: 72 LGSHTAVASTGDYSDHQMMERTLSRYALKDFLHDDNSVRTAHQYAALLSRLMYQKRSRMD 131
Query: 124 PLWNSLVLGG----------VKNGQK---YLGMVSMIGVNFEDSHVATGFGNHLARPILR 170
P W S+V+ G V QK LG V M G +E+ +ATG G + A ++R
Sbjct: 132 PWWLSVVVAGYQGERSEAREVSEEQKKPFTLGYVDMYGTFYEEEVIATGLGRYFAVTLMR 191
Query: 171 DEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTA 230
+ ++S E+ +LLE+CMR+L YRD A N++Q K+T EG ++ +PY L + W +
Sbjct: 192 NRHRPDMSEEEARQLLEECMRILFYRDCGASNRIQFTKVTAEGVSVEEPYVLDSKWDYEH 251
Query: 231 FQNPT 235
+ T
Sbjct: 252 YVKKT 256
>gi|401405483|ref|XP_003882191.1| proteasome A-type and B-type domain-containing protein [Neospora
caninum Liverpool]
gi|325116606|emb|CBZ52159.1| proteasome A-type and B-type domain-containing protein [Neospora
caninum Liverpool]
Length = 267
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 130/238 (54%), Gaps = 17/238 (7%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
+ P D T +P VT +SV+ + YKDGILM AD SYG R+K R +G H+ +
Sbjct: 24 LAPRD----TTVPIVTTSSVLGITYKDGILMVADTLASYGRMTRFKDTSRFFTLGTHTAV 79
Query: 71 GASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
++G+ SD Q L R L L D + DD + + + L+R+MY +R++ +P W S++
Sbjct: 80 ASTGDYSDHQMLERTLSRYALKDFLHDDNSVRTAHQYGALLSRLMYQKRSRMNPWWLSVI 139
Query: 131 LGGVKNGQK-------------YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENL 177
+GG + + LG V M G +E+ +ATG G + A ++R+ ++
Sbjct: 140 VGGYQGERTETREVSDKCAKPFVLGYVDMYGTFYEEDVIATGLGRYFAITLMRNRHRPDM 199
Query: 178 SYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPT 235
S ++ +LLE+CMR+L YRD A N++Q KIT G T+ +PY + + W + + T
Sbjct: 200 SEDEARQLLEECMRLLFYRDCGASNRIQFTKITTSGVTVEEPYVIDSKWDYEHYVKKT 257
>gi|323305090|gb|EGA58841.1| Pre4p [Saccharomyces cerevisiae FostersB]
Length = 266
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 129/204 (63%), Gaps = 10/204 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ VER+ P+G ++++G SG+
Sbjct: 30 PMVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGD 89
Query: 76 ISDFQELLRNLDELIL---YDN-MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISD Q + R L++L+ YDN + D +L P + YL VMY RR+K +PLWN++++
Sbjct: 90 ISDMQHIERLLEDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIV 149
Query: 132 GGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPIL-----RDEWHENLSYEDGVKL 185
GV+ NG ++L V+++GV + +ATGFG H+A P+L R+ + + +
Sbjct: 150 AGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLXKVVDRESDIPKTTVQVAEEA 209
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKI 209
+ MRVL YRD + +A I
Sbjct: 210 IVNAMRVLYYRDARSSRNFSLAII 233
>gi|430813169|emb|CCJ29470.1| unnamed protein product [Pneumocystis jirovecii]
Length = 640
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 90/230 (39%), Positives = 132/230 (57%), Gaps = 21/230 (9%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+ T P +TGTSV+ LK+KDG+++AAD SYGS R+ +ER+ +G +++G SGEI
Sbjct: 405 VNHTLKPILTGTSVLGLKFKDGVMLAADNLASYGSLARFDDLERLFFVGT-TVVGVSGEI 463
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK- 135
SDFQ L R L+ + + ++DG+ L ++ YL++V Y RR K DPL NS V+GG+
Sbjct: 464 SDFQYLKRLLES--IKEKNYEDGHILCASHIYEYLSQVFYGRRTKMDPLLNSCVIGGLDP 521
Query: 136 -----------NGQK--YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN----LS 178
GQ +LG +GV + VATG+G ++A P+LR + LS
Sbjct: 522 EGVSVCIPGTTCGQPGIFLGYADFLGVTYSAPCVATGYGAYMAIPLLRKATEDGRDALLS 581
Query: 179 YEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
ED K+++ CMRVL RD ++NK +A IT +G T + T W F
Sbjct: 582 QEDARKVIDDCMRVLYCRDARSLNKFSVATITRKGVTFDTNQTVDTRWNF 631
>gi|170033319|ref|XP_001844525.1| proteasome subunit beta type 4 [Culex quinquefasciatus]
gi|167874263|gb|EDS37646.1| proteasome subunit beta type 4 [Culex quinquefasciatus]
Length = 268
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 131/215 (60%), Gaps = 7/215 (3%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QR+ P TGTSVV LK+ +G+++ AD SYGS R+ V+R+ + +++G G+ +
Sbjct: 46 QRSYTPVTTGTSVVGLKFANGVIITADKLVSYGSLARFHDVDRVYKVNDKTIIGIGGDFA 105
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ + R++D+ ++ D D N L PK L+++LTRVMYNRR++F PL+ +V+GG+++G
Sbjct: 106 DFQFIKRHIDQKVVDDMCLADKNELKPKSLYNWLTRVMYNRRSEFKPLYLDIVVGGMQDG 165
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN------LSYEDGVKLLEKCMR 191
+ +LG V++ G + + VATG+G HLA P+LR E+ EN L + +L + M
Sbjct: 166 EPFLGHVNLRGRAYTSNVVATGYGTHLALPLLR-EYSENPTAYAGLDKQKATELAKSVME 224
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
VL YRD + K A T +G + +K W
Sbjct: 225 VLWYRDCRSDPKYSQAICTADGVQVDGHCFVKQNW 259
>gi|14318575|ref|NP_116708.1| proteasome core particle subunit beta 7 [Saccharomyces cerevisiae
S288c]
gi|266838|sp|P30657.1|PSB7_YEAST RecName: Full=Proteasome subunit beta type-7; AltName:
Full=Macropain subunit PRE4; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE4;
AltName: Full=Proteasome component PRE4; AltName:
Full=Proteinase YSCE subunit PRE4; Flags: Precursor
gi|11514004|pdb|1G0U|M Chain M, A Gated Channel Into The Proteasome Core Particle
gi|11514018|pdb|1G0U|1 Chain 1, A Gated Channel Into The Proteasome Core Particle
gi|178847472|pdb|2ZCY|M Chain M, Yeast 20s Proteasome:syringolin A-Complex
gi|178847486|pdb|2ZCY|0 Chain 0, Yeast 20s Proteasome:syringolin A-Complex
gi|178847514|pdb|3BDM|M Chain M, Yeast 20s Proteasome:glidobactin A-Complex
gi|178847528|pdb|3BDM|0 Chain 0, Yeast 20s Proteasome:glidobactin A-Complex
gi|323462948|pdb|3NZJ|M Chain M, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462962|pdb|3NZJ|1 Chain 1, Crystal Structure Of Yeast 20s Proteasome In Complex With
Ligand 2a
gi|323462976|pdb|3NZW|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323462990|pdb|3NZW|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With 2b
gi|323463004|pdb|3NZX|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|323463018|pdb|3NZX|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Ligand 2c
gi|333361184|pdb|3MG6|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361198|pdb|3MG6|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
6
gi|333361212|pdb|3MG7|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361226|pdb|3MG7|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
8
gi|333361240|pdb|3MG8|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|333361254|pdb|3MG8|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
16
gi|403071960|pdb|4B4T|7 Chain 7, Near-Atomic Resolution Structural Model Of The Yeast 26s
Proteasome
gi|4223|emb|CAA48629.1| proteasome Pre4 subunit [Saccharomyces cerevisiae]
gi|836805|dbj|BAA09289.1| proteosome component PRE4 [Saccharomyces cerevisiae]
gi|151940814|gb|EDN59201.1| proteasome subunit [Saccharomyces cerevisiae YJM789]
gi|190406625|gb|EDV09892.1| necessary for peptidyl glutamyl peptide hydrolyzing activity
[Saccharomyces cerevisiae RM11-1a]
gi|207345601|gb|EDZ72367.1| YFR050Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256268832|gb|EEU04186.1| Pre4p [Saccharomyces cerevisiae JAY291]
gi|259146242|emb|CAY79501.1| Pre4p [Saccharomyces cerevisiae EC1118]
gi|285811948|tpg|DAA12493.1| TPA: proteasome core particle subunit beta 7 [Saccharomyces
cerevisiae S288c]
gi|323333754|gb|EGA75146.1| Pre4p [Saccharomyces cerevisiae AWRI796]
gi|323337806|gb|EGA79049.1| Pre4p [Saccharomyces cerevisiae Vin13]
gi|323348807|gb|EGA83047.1| Pre4p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355212|gb|EGA87039.1| Pre4p [Saccharomyces cerevisiae VL3]
gi|365765883|gb|EHN07388.1| Pre4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299614|gb|EIW10707.1| Pre4p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|742353|prf||2009376D proteasome:SUBUNIT=Pre4
Length = 266
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 131/204 (64%), Gaps = 10/204 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ VER+ P+G ++++G SG+
Sbjct: 30 PMVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGD 89
Query: 76 ISDFQELLRNLDELIL---YDN-MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISD Q + R L +L+ YDN + D +L P + YL VMY RR+K +PLWN++++
Sbjct: 90 ISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIV 149
Query: 132 GGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEW-HENLSYEDGVKLLEK- 188
GV+ NG ++L V+++GV + +ATGFG H+A P+LR E+ + V++ E+
Sbjct: 150 AGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEA 209
Query: 189 ---CMRVLLYRDRSAVNKLQIAKI 209
MRVL YRD + +A I
Sbjct: 210 IVNAMRVLYYRDARSSRNFSLAII 233
>gi|167382385|ref|XP_001736078.1| proteasome subunit beta type-4 precursor [Entamoeba dispar SAW760]
gi|167388725|ref|XP_001738673.1| proteasome subunit beta type-4 precursor [Entamoeba dispar SAW760]
gi|165897983|gb|EDR24993.1| proteasome subunit beta type-4 precursor, putative [Entamoeba
dispar SAW760]
gi|165901613|gb|EDR27689.1| proteasome subunit beta type-4 precursor, putative [Entamoeba
dispar SAW760]
Length = 225
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 127/210 (60%), Gaps = 1/210 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PIQ+ + SV+ +KY +GIL+AAD GSYGS +K +ERI +GK++L+G SGE
Sbjct: 8 PIQQPTGVVLGTASVIGIKYDNGILIAADTLGSYGSMALFKDLERIIKLGKYTLIGGSGE 67
Query: 76 ISDFQELLRNLDELILYDNMWD-DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
SDF EL L + + D + N P EL+SY R++Y R PL+ +L++GGV
Sbjct: 68 YSDFIELNETLQKKVNGDECCEGKENGFKPSELYSYAQRILYEHRCDQKPLFVTLIVGGV 127
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLL 194
K + +LG M G +F +++VA+G G H+A P+LR EW +++S E+ L+E+CM++L
Sbjct: 128 KKDEIFLGQTDMYGTSFTENYVASGIGAHMAMPLLRKEWKDHMSREEAEHLIERCMKILY 187
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKT 224
A ++ + + EG+ I P A+ T
Sbjct: 188 LNHCWAGSQYLLGVVDSEGSDIIGPIAIDT 217
>gi|145545111|ref|XP_001458240.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426059|emb|CAK90843.1| unnamed protein product [Paramecium tetraurelia]
Length = 236
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 129/216 (59%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
Q T P VTG SV+AL Y G+++ D SYGS +K+V++I I K+++ +SGE S
Sbjct: 12 QHTTSPVVTGGSVIALVYNGGVIVGTDTLCSYGSMAAFKNVQKIAQISKNTIYASSGEYS 71
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
DFQ++++ L ++ +DDG PK+ ++L R+ Y +R K +PL+ V+ G NG
Sbjct: 72 DFQQVVKELAKIDRSALQYDDGVHPSPKDYGNFLARLSYKKRCKINPLYLQNVIAGFHNG 131
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
++YLG++ + G E + + TGF ++ + I+ + W+EN + + +++ +C +VL RD
Sbjct: 132 ERYLGLIDIYGTYLESNFITTGFASYFCKAIISNYWNENCTLDQAKQVIRECFKVLFCRD 191
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQN 233
A + +Q+A + +G I + ++T W F F++
Sbjct: 192 CRAHDVIQLAYVDAQGAHIEESERVETKWDFNGFKS 227
>gi|221052130|ref|XP_002257641.1| proteasome beta-subunit [Plasmodium knowlesi strain H]
gi|193807471|emb|CAQ37977.1| proteasome beta-subunit, putative [Plasmodium knowlesi strain H]
Length = 256
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 129/231 (55%), Gaps = 33/231 (14%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P VTGTSV+ALKYK GIL+AAD SYGS ++++VERI I +++ SGE++D Q L
Sbjct: 5 PVVTGTSVIALKYKHGILIAADKKASYGSYAKFQNVERIFKINNKTVMSFSGELADAQYL 64
Query: 83 LRNLDELILYDNMWDDGNSL---GPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
L + + +N+ D + K HSY+ R+ YNR+NK DPL+N++++ GV N Q
Sbjct: 65 HEALTRVNV-NNVMDKKSKYDVHNTKYYHSYVGRLFYNRKNKIDPLFNTIIVAGV-NSQD 122
Query: 140 ----------------------------YLGMVSMIGVNFEDSHVATGFGNHLARPILRD 171
Y+G V M G F ++ TG+ + A +LRD
Sbjct: 123 YDDNDKDVLLYSDKHTTDEYKIINKEDLYIGFVDMHGTQFSADYMTTGYARYFALTLLRD 182
Query: 172 EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL 222
+ + ++ E+ LL +C+RVL YRD +A NK+QI KIT +G +PY L
Sbjct: 183 HYKDYMTEEEAKTLLNECLRVLYYRDATASNKIQIVKITSKGVEYEEPYFL 233
>gi|312385966|gb|EFR30350.1| hypothetical protein AND_00124 [Anopheles darlingi]
Length = 246
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 128/211 (60%), Gaps = 7/211 (3%)
Query: 22 LPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQE 81
P TG+SVV L ++DG+++AAD SYGS R+ V+R+ + ++LG G+ +DFQ
Sbjct: 28 FPVTTGSSVVGLMFQDGVVIAADKLISYGSLARFHDVDRVYRVNDKTILGIGGDFADFQY 87
Query: 82 LLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYL 141
+ R++D+ ++ D DD N L P+ +++LTRVMYNRR+ F+PL+ LV+GG+++G+ +L
Sbjct: 88 IKRHIDQKVIDDQCLDDKNQLKPRSFYNWLTRVMYNRRSDFNPLYLDLVIGGMQDGEPFL 147
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN------LSYEDGVKLLEKCMRVLLY 195
G V++ G ++ + VATG+G HLA P+LR E+ EN L L+++ M VL Y
Sbjct: 148 GHVNLRGRSYTSNVVATGYGTHLALPLLR-EYSENPVAYQTLKQPQATDLMKRVMEVLWY 206
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
RD + K A T G + + W
Sbjct: 207 RDCRSDPKYSQAICTTAGVQLDADCFVAQNW 237
>gi|125776797|ref|XP_001359396.1| GA11323 [Drosophila pseudoobscura pseudoobscura]
gi|195152593|ref|XP_002017221.1| GL22187 [Drosophila persimilis]
gi|54639140|gb|EAL28542.1| GA11323 [Drosophila pseudoobscura pseudoobscura]
gi|194112278|gb|EDW34321.1| GL22187 [Drosophila persimilis]
Length = 268
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 125/204 (61%), Gaps = 3/204 (1%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDEL 89
V+ ++Y G+++AAD SYGS RY+++ R+ PI + +LG G+ +D Q + R +D+
Sbjct: 60 VLGIRYDGGVMIAADTLVSYGSLARYQNILRVFPINNNIILGGGGDFADIQSIKRTIDQK 119
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMVSMIG 148
++ D + DG ++ PK L S+LTRV+YNRR++ +PL+ +V+GG+ ++G YL V + G
Sbjct: 120 MIEDQCYADGITMKPKALSSWLTRVLYNRRSRMNPLYIDVVVGGIEQDGTPYLANVDLRG 179
Query: 149 VNFEDSHVATGFGNHLARPILRDEWHENLSY--EDGVKLLEKCMRVLLYRDRSAVNKLQI 206
+ED VATGF HLA P++R+ ++ + E+ +L+ KCM VL YRD + + +
Sbjct: 180 RAYEDYVVATGFARHLALPLVRERKPKDREFTAEEASELIRKCMEVLYYRDTRNMAQYTV 239
Query: 207 AKITEEGTTISQPYALKTFWGFTA 230
GTTI P + W F A
Sbjct: 240 GVCNASGTTIDGPCKVSENWTFAA 263
>gi|124512686|ref|XP_001349476.1| proteasome beta-subunit [Plasmodium falciparum 3D7]
gi|6650323|gb|AAF21797.1| proteasome beta-subunit [Plasmodium falciparum]
gi|23499245|emb|CAD51325.1| proteasome beta-subunit [Plasmodium falciparum 3D7]
Length = 265
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/259 (32%), Positives = 137/259 (52%), Gaps = 52/259 (20%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P VTGTSV+A+KYK GI++AAD SYGS ++++VERI I +++G SGE++D Q L
Sbjct: 5 PVVTGTSVIAIKYKHGIMIAADRKASYGSYAKFQNVERIFKINNKTVMGFSGELADAQYL 64
Query: 83 --------LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+ NL E ++M+ P+ HSY++RV Y R+N+ DPL+N++++ G+
Sbjct: 65 HELLTRKNINNLSEKKRKEDMY------TPQHYHSYVSRVFYVRKNRIDPLFNNIIIAGI 118
Query: 135 KNGQK-------------------------------------YLGMVSMIGVNFEDSHVA 157
N QK Y+G V M G NF D ++
Sbjct: 119 -NSQKYDNNDDNVLLYTNKNNDDEQNEYKNNEEYKEIHKDDLYIGFVDMHGTNFCDDYIT 177
Query: 158 TGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTIS 217
TG+ + A +LRD + +N++ E+ L+ +C+R+L +RD ++ N +QI K+T +G
Sbjct: 178 TGYARYFALTLLRDHYKDNMTEEEARILINECLRILYFRDATSSNFIQIVKVTSKGVEYE 237
Query: 218 QPYALKTFWGFTAFQNPTA 236
+PY L + P+
Sbjct: 238 EPYILPCVLNSADYVYPST 256
>gi|50554559|ref|XP_504688.1| YALI0E32505p [Yarrowia lipolytica]
gi|49650557|emb|CAG80292.1| YALI0E32505p [Yarrowia lipolytica CLIB122]
Length = 265
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 138/217 (63%), Gaps = 11/217 (5%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P + TQ P VTG+SV+ +K+ G+++AAD SYGS R+ +++R+ +G +++G G+
Sbjct: 33 PKKHTQQPTVTGSSVIGIKFDKGVIVAADTLASYGSLARFDNMDRLTQVGDSTIVGIGGD 92
Query: 76 ISDFQELLRNLDELIL---YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
+SD Q + R L+EL + YDN D SL + + +YL++V YNRR+K DPLWN++++G
Sbjct: 93 VSDMQYVQRLLEELEIEENYDNSGD--QSLHSENIFNYLSKVYYNRRSKMDPLWNAVLVG 150
Query: 133 GVKN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD-----EWHENLSYEDGVKLL 186
GV + + +L V ++GV F +ATGFG +LA P+LR + ++N++ D ++
Sbjct: 151 GVDSKDEPFLSHVDLLGVTFSSPALATGFGAYLALPLLRQLVPYPDSYKNVTEADARAMV 210
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK 223
EKCM+VL YRD +++K +A IT+ I + K
Sbjct: 211 EKCMKVLFYRDARSIDKYDVATITKGNVKIEKDIKCK 247
>gi|378756876|gb|EHY66900.1| hypothetical protein NERG_00540 [Nematocida sp. 1 ERTm2]
Length = 246
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 89/226 (39%), Positives = 131/226 (57%), Gaps = 17/226 (7%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P Q YVTGTS++A+KYKDG+++A+D SYGS +YK++ER+ + K+ LG SGE
Sbjct: 17 PKQVHSQGYVTGTSILAVKYKDGVMVASDTQLSYGSYAKYKNIERVGAVSKNIFLGTSGE 76
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
S+FQEL++NL I + D LGP+E + MY +R K P N+ V+ G++
Sbjct: 77 YSNFQELIKNLR--IQINPPGDKEVFLGPRECFKMVRNYMYEKRCKGRPEMNTHVIAGIE 134
Query: 136 -------------NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSY--E 180
K+LG+V +G + D+ V TG G HLA P+LR NL E
Sbjct: 135 EVPAKGTLPYEDDQSGKFLGVVDHLGNFYFDNVVGTGLGAHLAIPVLRARIGTNLDLPEE 194
Query: 181 DGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
+ K+L + M L YRD A + +Q++K+T++G TIS+P+ L T W
Sbjct: 195 EAYKILTEAMATLCYRDCRASDTIQVSKVTKDGITISKPFVLSTSW 240
>gi|195343623|ref|XP_002038395.1| GM10644 [Drosophila sechellia]
gi|194133416|gb|EDW54932.1| GM10644 [Drosophila sechellia]
Length = 268
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 125/202 (61%), Gaps = 3/202 (1%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDEL 89
V+ ++Y G+++AAD SYGS RY+++ER+ I K+ LLG SG+ +D Q + RN+D+
Sbjct: 60 VLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKINKNILLGGSGDFADIQSIKRNIDQK 119
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN-GQKYLGMVSMIG 148
++ D DD + PK L S++TRV+YNRR++ +PL+ +V+GGV N G YL V + G
Sbjct: 120 MIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVDLRG 179
Query: 149 VNFEDSHVATGFGNHLARPILRDEWHENLSYE--DGVKLLEKCMRVLLYRDRSAVNKLQI 206
++ED VATGF HLA P++R++ ++ + + +L+ CM VL YRD +++ +
Sbjct: 180 RSYEDYVVATGFARHLAIPLVREKKPKDRDFTAVEASELIRTCMEVLYYRDTRNISQYTV 239
Query: 207 AKITEEGTTISQPYALKTFWGF 228
+ G + P+ + W F
Sbjct: 240 GVCSVNGCGVEGPFQVNENWTF 261
>gi|51013345|gb|AAT92966.1| YFR050C [Saccharomyces cerevisiae]
Length = 266
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 131/204 (64%), Gaps = 10/204 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ VER+ P+G ++++G SG+
Sbjct: 30 PMVNTQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGD 89
Query: 76 ISDFQELLRNLDELIL---YDN-MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISD Q + R L +L+ YDN + D +L P + YL VMY RR+K +PLWN++++
Sbjct: 90 ISDMQHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIV 149
Query: 132 GGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEW-HENLSYEDGVKLLEK- 188
GV+ NG ++L V+++GV + +ATGFG H+A P++R E+ + V++ E+
Sbjct: 150 AGVQSNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLVRKVVDRESDIPKTTVQVAEEA 209
Query: 189 ---CMRVLLYRDRSAVNKLQIAKI 209
MRVL YRD + +A I
Sbjct: 210 IVNAMRVLYYRDARSSRNFSLAII 233
>gi|50285089|ref|XP_444973.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524275|emb|CAG57866.1| unnamed protein product [Candida glabrata]
Length = 265
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 129/207 (62%), Gaps = 10/207 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+++KY +G+++AAD +YGS +R+ VER+ P+G+++++G SG+
Sbjct: 29 PKMNTQDPIVTGTSVISMKYNNGVVIAADNLAAYGSLLRFNGVERLIPVGENTIVGVSGD 88
Query: 76 ISDFQELLRNLDELIL---YDNMW-DDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
+SD Q + LDE+ + YDN DD +L P + YL VMY RR+K DPLWN++++
Sbjct: 89 VSDMQHIEYLLDEMKIENNYDNSSPDDEEALQPSYVFEYLAAVMYQRRSKMDPLWNAVIV 148
Query: 132 GGV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYED-----GVKL 185
G+ K+G +L V+++GV + +ATGFG HLA P+LR + E +
Sbjct: 149 AGIEKDGSPFLRYVNLLGVTYSSPTLATGFGAHLAIPLLRRVIDKETDIEKTDLALAEQT 208
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEE 212
+ + M+VL YRD + K +A I ++
Sbjct: 209 IRESMKVLFYRDARSSKKYSLAIIDKD 235
>gi|195111662|ref|XP_002000397.1| GI10207 [Drosophila mojavensis]
gi|193916991|gb|EDW15858.1| GI10207 [Drosophila mojavensis]
Length = 266
Score = 157 bits (396), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 130/208 (62%), Gaps = 3/208 (1%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
TG+SV+ +++ G+L+AAD SYGS RY+++ER+ I LLG G+ +D Q + R
Sbjct: 53 TTGSSVLGIRFDGGVLVAADTLVSYGSLARYQNIERVFQINNKILLGGGGDFADIQSIKR 112
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGM 143
++D+ ++ D +DG + P EL S+LTRV+YNRR + +PL+ +V+GGV + G+ +LG
Sbjct: 113 SIDQKMIEDQCCNDGVVMKPAELSSWLTRVLYNRRCRMNPLYIDVVVGGVDEAGKPFLGN 172
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMRVLLYRDRSAV 201
V + G ++D VATGFG HLA P++R+ ++ ++E+ L+ + M+VL YRD ++
Sbjct: 173 VDLRGRAYDDYVVATGFGRHLALPLVRERKPKDREFTFEEATSLIRESMKVLYYRDTRSL 232
Query: 202 NKLQIAKITEEGTTISQPYALKTFWGFT 229
+ + T +I P+ ++ W F
Sbjct: 233 PQYTVGICTANDCSIKGPFKVEENWTFA 260
>gi|24644201|ref|NP_649529.1| proteasome beta7 subunit, isoform A [Drosophila melanogaster]
gi|24644203|ref|NP_730922.1| proteasome beta7 subunit, isoform B [Drosophila melanogaster]
gi|17380269|sp|Q9VNA5.1|PSB4_DROME RecName: Full=Proteasome subunit beta type-4; AltName:
Full=Proteasome subunit beta type-7
gi|7296763|gb|AAF52041.1| proteasome beta7 subunit, isoform A [Drosophila melanogaster]
gi|21430236|gb|AAM50796.1| LD24633p [Drosophila melanogaster]
gi|23170445|gb|AAN13277.1| proteasome beta7 subunit, isoform B [Drosophila melanogaster]
gi|220943926|gb|ACL84506.1| Prosbeta4-PA [synthetic construct]
gi|220953802|gb|ACL89444.1| Prosbeta4-PA [synthetic construct]
Length = 268
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 125/202 (61%), Gaps = 3/202 (1%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDEL 89
V+ ++Y G+++AAD SYGS RY+++ER+ + K+ LLG SG+ +D Q + RN+D+
Sbjct: 60 VLGIRYDSGVMLAADTLVSYGSMARYQNIERVFKVNKNILLGGSGDFADIQSIKRNIDQK 119
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN-GQKYLGMVSMIG 148
++ D DD + PK L S++TRV+YNRR++ +PL+ +V+GGV N G YL V + G
Sbjct: 120 MIEDQCCDDNIEMKPKSLASWMTRVLYNRRSRMNPLYIDVVVGGVDNEGTPYLANVDLRG 179
Query: 149 VNFEDSHVATGFGNHLARPILRDEWHENLSYE--DGVKLLEKCMRVLLYRDRSAVNKLQI 206
++ED VATGF HLA P++R++ ++ + + +L+ CM VL YRD +++ +
Sbjct: 180 RSYEDYVVATGFARHLAVPLVREKKPKDRDFTAVEASELIRTCMEVLYYRDTRNISQYTV 239
Query: 207 AKITEEGTTISQPYALKTFWGF 228
+ G + P+ + W F
Sbjct: 240 GVCSVNGCGVEGPFQVNENWTF 261
>gi|387594239|gb|EIJ89263.1| hypothetical protein NEQG_00033 [Nematocida parisii ERTm3]
gi|387594986|gb|EIJ92613.1| hypothetical protein NEPG_02501 [Nematocida parisii ERTm1]
Length = 246
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/218 (41%), Positives = 129/218 (59%), Gaps = 17/218 (7%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
YV GT+V+ALKYK+GI++A+D SYGS +YK++ER+ + K+ LLG SGE S+FQE++
Sbjct: 25 YVMGTTVLALKYKNGIMLASDTQLSYGSLAKYKNIERVGVVSKNILLGTSGEYSNFQEMI 84
Query: 84 RNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ----- 138
+ L I + D LGP+E + + MY +R K P N+ ++ G++
Sbjct: 85 KRLR--IQINPPGDKEVFLGPRECFNMVRNYMYEKRCKGRPEMNTHIIAGIEETAPPTLL 142
Query: 139 --------KYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEK 188
K+LG+V +G + DS V TG G HLA PILRD N L E+ K+L
Sbjct: 143 PYETDPSGKFLGVVDHLGNFYFDSVVGTGIGAHLAIPILRDRVGTNTELPEEEAHKILCD 202
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
M L YRD A N +QI+KIT++ TIS+P+AL T W
Sbjct: 203 AMATLCYRDCRATNMIQISKITKDKITISRPFALNTSW 240
>gi|242247664|ref|NP_001156219.1| proteasome subunit N3-like [Acyrthosiphon pisum]
gi|328699540|ref|XP_003240966.1| PREDICTED: proteasome subunit beta type-4-like [Acyrthosiphon
pisum]
gi|239788332|dbj|BAH70854.1| ACYPI006743 [Acyrthosiphon pisum]
Length = 252
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 136/225 (60%), Gaps = 8/225 (3%)
Query: 9 GLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHS 68
G +D +Q P T TSV+ + ++ G+ +AAD SYGS +++ RI + ++
Sbjct: 19 GHTAQHDVVQHGWTPITTTTSVLGVVFESGVALAADTLTSYGSMACFQNNPRILTVNQNI 78
Query: 69 LLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNS 128
++ A+GE SD+Q + ++E + + +DG S+ PK LH++L+RV+YNRR K PLW++
Sbjct: 79 IVAAAGEYSDYQFIRDVVEEKVRTEKSLNDGISMKPKALHTWLSRVLYNRRTKMKPLWST 138
Query: 129 LVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPIL-------RDEWHENLSYED 181
++ G++N +LG + +G F D +A+G+G +LA P++ R++++ L+ ++
Sbjct: 139 FLVAGIQNDVPFLGEIDKLGTAFADEQIASGYGAYLALPLMRKAIDEKREKFNSKLTKDE 198
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
+ LL+KCM VL YRD + +K QI +T++ + Q ALK W
Sbjct: 199 AIDLLKKCMEVLYYRDARSHDKYQIGIVTKDSVEV-QNLALKPRW 242
>gi|410083827|ref|XP_003959491.1| hypothetical protein KAFR_0J02920 [Kazachstania africana CBS 2517]
gi|372466082|emb|CCF60356.1| hypothetical protein KAFR_0J02920 [Kazachstania africana CBS 2517]
Length = 266
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 87/207 (42%), Positives = 133/207 (64%), Gaps = 10/207 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+KY +G+++AAD G+YGS +R+ +ER+ P+G+++++G SG+
Sbjct: 30 PSMNTQQPIVTGTSVIAMKYNNGVIIAADNLGAYGSLLRFTDIERLIPVGQNTVVGISGD 89
Query: 76 ISDFQELLRNLDELIL---YDNMWDDGN-SLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
ISD Q + LDEL + YDN D N L P + YL VMYNRR+K DPLWN+L++
Sbjct: 90 ISDMQHIEELLDELEIENNYDNSSADSNECLQPSYVFEYLANVMYNRRSKMDPLWNALIV 149
Query: 132 GGVK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKL 185
G++ +G+ +L V+++GV + +ATGFG HLA P+LR D E + E K
Sbjct: 150 AGLEDDGKPFLRYVNLLGVTYSSPTLATGFGAHLAVPLLRRVIDHDSDVEKTTLETAEKT 209
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEE 212
+ + ++VL YRD + K +A + ++
Sbjct: 210 ILESLKVLYYRDARSSRKFSLAILDKD 236
>gi|406604924|emb|CCH43597.1| Proteasome subunit beta type-4 [Wickerhamomyces ciferrii]
Length = 242
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 121/193 (62%), Gaps = 5/193 (2%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y + A+KYKDGI++AAD GSYGS R+ VER+ P G ++++G SG+ISD Q +
Sbjct: 19 YNNAIANAAIKYKDGIVIAADNLGSYGSLARFTDVERLFPTGDNAVVGISGDISDLQYVS 78
Query: 84 RNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
R LD+L + N DG+ L +H YL +V Y+RR+K DPLWNS+++ G+ + + +L
Sbjct: 79 RLLDDLEIEHNYDSDGHQLKASHIHEYLQKVFYHRRSKMDPLWNSVIVAGLDDDKPFLKY 138
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLEKCMRVLLYRDR 198
V ++GV + +ATGFG +LA P+LR +E N+ E + +CM+VL YRD
Sbjct: 139 VDLLGVTYSAPTLATGFGAYLAVPLLRKVVDKEEDVANVDEETATNAIRECMKVLYYRDA 198
Query: 199 SAVNKLQIAKITE 211
+++K + I++
Sbjct: 199 RSLDKYTLVTISK 211
>gi|401429027|ref|XP_003878996.1| 20s proteasome beta 7 subunit, (putative) [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495245|emb|CBZ30549.1| 20s proteasome beta 7 subunit, (putative) [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 220
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 125/209 (59%), Gaps = 3/209 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
+G SV+A+KY G+LMAAD SYGS ++ ++ RIK +G +S + A+G +DFQ + +
Sbjct: 3 SGGSVIAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGSYSAVCATGSYADFQMMAKQ 62
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+++ I M+ + + L P E+ SYL R +Y +R F+P +V G ++ + +L V
Sbjct: 63 VEDNIERQKMYHNVDELKPSEVFSYLHRSIYQKRCDFEPCLCQMVFIGARDSETFLAAVD 122
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHEN---LSYEDGVKLLEKCMRVLLYRDRSAVN 202
+G +ED VATG+G +A P+LR +N LS ++L C+RVL YR+ ++N
Sbjct: 123 DVGTRWEDDCVATGYGAFIALPLLRQALEKNPGGLSRVQAEQILTDCLRVLFYRECRSIN 182
Query: 203 KLQIAKITEEGTTISQPYALKTFWGFTAF 231
K Q+A +G IS+P+ ++T W + F
Sbjct: 183 KFQLADAAGDGVRISEPFDVETNWEYEGF 211
>gi|70951412|ref|XP_744948.1| proteasome beta-subunit [Plasmodium chabaudi chabaudi]
gi|56525107|emb|CAH77641.1| proteasome beta-subunit, putative [Plasmodium chabaudi chabaudi]
Length = 256
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 139/233 (59%), Gaps = 37/233 (15%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQ-- 80
P VTGTSV+ALKY++GI++AAD SYGS ++++V+RI I +++ SGE++D Q
Sbjct: 5 PVVTGTSVIALKYRNGIMIAADKKASYGSYAKFQNVQRIFKISNKTVMSFSGELADAQYL 64
Query: 81 -ELLR--NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
ELL N+++++ + +D ++ K HSY++R+ YNR+NK DPL+N++++ G+ N
Sbjct: 65 HELLTRVNVNDVVEKKSKYDLHDT---KYYHSYVSRLFYNRKNKLDPLFNNIIIAGL-NS 120
Query: 138 QK----------------------------YLGMVSMIGVNFEDSHVATGFGNHLARPIL 169
Q+ Y+G V M G F + ++ TG+ + A +L
Sbjct: 121 QEYDDNDKDILLYSEKQNNEEYKDIDKKDLYIGFVDMHGTQFCEDYITTGYARYFALTLL 180
Query: 170 RDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL 222
R+ + +N++ ++ LL +C+R+L +RD +A NK+QI K+T +G +PY L
Sbjct: 181 RNHYRDNMTEDEARSLLNECLRILYFRDTTASNKIQIVKVTSKGVEYEEPYIL 233
>gi|3114282|pdb|1RYP|N Chain N, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|3114296|pdb|1RYP|2 Chain 2, Crystal Structure Of The 20s Proteasome From Yeast At 2.4
Angstroms Resolution
gi|11513425|pdb|1G65|M Chain M, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|11513439|pdb|1G65|1 Chain 1, Crystal Structure Of Epoxomicin:20s Proteasome Reveals A
Molecular Basis For Selectivity Of
Alpha,Beta-Epoxyketone Proteasome Inhibitors
gi|14488818|pdb|1FNT|N Chain N, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|14488832|pdb|1FNT|BB Chain b, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|20150389|pdb|1JD2|M Chain M, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|20150396|pdb|1JD2|T Chain T, Crystal Structure Of The Yeast 20s Proteasome:tmc-95a
Complex: A Non- Covalent Proteasome Inhibitor
gi|75765712|pdb|1Z7Q|N Chain N, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|75765726|pdb|1Z7Q|BB Chain b, Crystal Structure Of The 20s Proteasome From Yeast In
Complex With The Proteasome Activator Pa26 From
Trypanosome Brucei At 3.2 Angstroms Resolution
gi|93279380|pdb|2F16|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|93279394|pdb|2F16|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Bortezomib
gi|99032214|pdb|2FAK|M Chain M, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|99032228|pdb|2FAK|1 Chain 1, Crystal Structure Of Salinosporamide A In Complex With The
Yeast 20s Proteasome
gi|112490855|pdb|2GPL|M Chain M, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|112490869|pdb|2GPL|1 Chain 1, Tmc-95 Based Biphenyl-Ether Macrocycles: Specific
Proteasome Inhibitors
gi|190016379|pdb|3D29|M Chain M, Proteasome Inhibition By Fellutamide B
gi|190016393|pdb|3D29|1 Chain 1, Proteasome Inhibition By Fellutamide B
gi|197725333|pdb|3E47|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|197725347|pdb|3E47|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Homobelactosin C
gi|211939224|pdb|3DY3|M Chain M, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939238|pdb|3DY3|1 Chain 1, Crystal Structure Of Yeast 20s Proteasome In Complex With
The Epimer Form Of Spirolactacystin
gi|211939252|pdb|3DY4|M Chain M, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|211939266|pdb|3DY4|1 Chain 1, Crystal Structure Of Yeast 20s Proteasome In Complex With
Spirolactacystin
gi|238828249|pdb|3GPJ|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|238828263|pdb|3GPJ|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Syringolin B
gi|258588333|pdb|3GPT|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588347|pdb|3GPT|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Slow Substrate Ligand
gi|258588361|pdb|3GPW|M Chain M, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588375|pdb|3GPW|1 Chain 1, Crystal Structure Of The Yeast 20s Proteasome In Complex
With Salinosporamide Derivatives: Irreversible Inhibitor
Ligand
gi|258588555|pdb|3HYE|M Chain M, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|258588569|pdb|3HYE|1 Chain 1, Crystal Structure Of 20s Proteasome In Complex With
Hydroxylated Salinosporamide
gi|298508235|pdb|1VSY|N Chain N, Proteasome Activator Complex
gi|298508249|pdb|1VSY|2 Chain 2, Proteasome Activator Complex
gi|298508451|pdb|3L5Q|R Chain R, Proteasome Activator Complex
gi|298508465|pdb|3L5Q|4 Chain 4, Proteasome Activator Complex
gi|330689393|pdb|3MG4|M Chain M, Structure Of Yeast 20s Proteasome With Compound 1
gi|330689407|pdb|3MG4|1 Chain 1, Structure Of Yeast 20s Proteasome With Compound 1
gi|333361156|pdb|3MG0|M Chain M, Structure Of Yeast 20s Proteasome With Bortezomib
gi|333361170|pdb|3MG0|1 Chain 1, Structure Of Yeast 20s Proteasome With Bortezomib
gi|335892353|pdb|3OKJ|M Chain M, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|335892367|pdb|3OKJ|1 Chain 1, Alpha-Keto-Aldehyde Binding Mechanism Reveals A Novel Lead
Structure Motif For Proteasome Inhibition
gi|340780431|pdb|3OEU|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780445|pdb|3OEU|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
24
gi|340780459|pdb|3OEV|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|340780473|pdb|3OEV|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
25
gi|350610684|pdb|3TDD|M Chain M, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|350610698|pdb|3TDD|1 Chain 1, Crystal Structure Of Yeast Cp In Complex With Belactosin C
gi|359545858|pdb|3SHJ|M Chain M, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|359545872|pdb|3SHJ|1 Chain 1, Proteasome In Complex With Hydroxyurea Derivative Hu10
gi|378792253|pdb|3UN4|M Chain M, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792267|pdb|3UN4|AA Chain a, Yeast 20s Proteasome In Complex With Pr-957 (Morpholine)
gi|378792287|pdb|3UN8|M Chain M, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|378792301|pdb|3UN8|AA Chain a, Yeast 20s Proteasome In Complex With Pr-957 (Epoxide)
gi|390980828|pdb|3SDI|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980842|pdb|3SDI|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
20
gi|390980856|pdb|3SDK|M Chain M, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|390980870|pdb|3SDK|1 Chain 1, Structure Of Yeast 20s Open-Gate Proteasome With Compound
34
gi|402550744|pdb|4GK7|M Chain M, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|402550758|pdb|4GK7|AA Chain a, Yeast 20s Proteasome In Complex With The
Syringolin-Glidobactin Chimera
gi|403072204|pdb|4G4S|N Chain N, Structure Of Proteasome-Pba1-Pba2 Complex
gi|409973872|pdb|4FZC|M Chain M, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973886|pdb|4FZC|AA Chain a, 20s Yeast Proteasome In Complex With Cepafungin I
gi|409973900|pdb|4FZG|M Chain M, 20s Yeast Proteasome In Complex With Glidobactin
gi|409973914|pdb|4FZG|AA Chain a, 20s Yeast Proteasome In Complex With Glidobactin
gi|444302351|pdb|4INR|M Chain M, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302365|pdb|4INR|AA Chain a, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu102
gi|444302379|pdb|4INT|M Chain M, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302393|pdb|4INT|AA Chain a, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu122
gi|444302407|pdb|4INU|M Chain M, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
gi|444302421|pdb|4INU|AA Chain a, Yeast 20s Proteasome In Complex With The Vinyl Sulfone
Lu112
Length = 233
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 129/200 (64%), Gaps = 10/200 (5%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
TQ P VTGTSV+++KY +G+++AAD GSYGS +R+ VER+ P+G ++++G SG+ISD
Sbjct: 1 TQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDM 60
Query: 80 QELLRNLDELIL---YDN-MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
Q + R L +L+ YDN + D +L P + YL VMY RR+K +PLWN++++ GV+
Sbjct: 61 QHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQ 120
Query: 136 -NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEW-HENLSYEDGVKLLEK----C 189
NG ++L V+++GV + +ATGFG H+A P+LR E+ + V++ E+
Sbjct: 121 SNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNA 180
Query: 190 MRVLLYRDRSAVNKLQIAKI 209
MRVL YRD + +A I
Sbjct: 181 MRVLYYRDARSSRNFSLAII 200
>gi|440634790|gb|ELR04709.1| 20S proteasome subunit beta 7 [Geomyces destructans 20631-21]
Length = 238
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 127/209 (60%), Gaps = 10/209 (4%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKH----SLLG 71
P Q TQ P VTGTSV+ LK+KDG+++AAD SYGS R+ +V+R++ +++G
Sbjct: 29 PSQHTQQPIVTGTSVIGLKFKDGVVIAADNLASYGSLARFTNVKRLRAFSSSGPPTAVIG 88
Query: 72 ASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVL 131
G++SD Q L R L L + + G+ L + +H+YL++V+Y RR+ F+PLWN L++
Sbjct: 89 FGGDVSDMQYLDRLLQSLSIEEAYSSSGHGLTAENVHTYLSKVLYKRRSDFNPLWNHLLV 148
Query: 132 GGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKL 185
G+ +L ++G F +ATGFG HLA P+LR +E + L+ E+ V+
Sbjct: 149 AGLDGADAPFLASADLLGTTFSAPCLATGFGAHLAVPLLRKVAKSEEAVKELTEEEAVRA 208
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEGT 214
+++C++VL YRD + ++ IA + + G
Sbjct: 209 VKECLKVLYYRDARSTDRYSIAVVKKGGV 237
>gi|156082185|ref|XP_001608581.1| proteasome beta-subunit type 4 [Plasmodium vivax Sal-1]
gi|148801520|gb|EDL42919.1| proteasome beta-subunit type 4, putative [Plasmodium vivax]
Length = 256
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 130/231 (56%), Gaps = 33/231 (14%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P VTGTSV+ALKYK GIL+AAD SYGS ++++VERI + +++ SGE++D Q L
Sbjct: 5 PVVTGTSVIALKYKHGILIAADKKASYGSYAKFQNVERIFKVNNKTVMSFSGELADAQYL 64
Query: 83 LRNLDELILYDNMWDDGNSL---GPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
L + + +N+ D + K H+Y+ R+ YNR+NK DPL+N++++ G+ N Q+
Sbjct: 65 HETLTRVNV-NNVMDKKSKYDLHNSKYYHAYVGRLFYNRKNKIDPLFNTIIVAGL-NSQE 122
Query: 140 ----------------------------YLGMVSMIGVNFEDSHVATGFGNHLARPILRD 171
Y+G V M G F ++ TG+ + A +LR+
Sbjct: 123 YDDNDKDVLLYTGKHTTDEYKEINKEDLYIGFVDMHGTQFAGDYMTTGYARYFALTLLRE 182
Query: 172 EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL 222
+ + ++ E+ LL +C+RVL YRD +A NK+QI KIT +G +PY L
Sbjct: 183 RYKDYMTEEEAKTLLNECLRVLFYRDATASNKIQIVKITSKGVEYEEPYFL 233
>gi|171684677|ref|XP_001907280.1| hypothetical protein [Podospora anserina S mat+]
gi|170942299|emb|CAP67951.1| unnamed protein product [Podospora anserina S mat+]
Length = 275
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 87/236 (36%), Positives = 133/236 (56%), Gaps = 24/236 (10%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+KYKDG++MAAD SYGS R+ V+R++ +++G G+
Sbjct: 29 PRTVTQSPVVTGTSVIAIKYKDGVVMAADNLASYGSLARFTDVKRLRTFLDTTVIGFGGD 88
Query: 76 ISDFQELLRNLDELILYDNMWD----------------DGNSLGPKELHSYLTRVMYNRR 119
+SD Q L R+L EL D ++ L L YL ++MY RR
Sbjct: 89 VSDMQFLDRHLKELAT-DESYEVEPTLDDEDDEESSSSKPGHLNAANLFKYLQKLMYQRR 147
Query: 120 NKFDPLWNSLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEW 173
N FDPLWN +++ G+ + K +L V + G +F +ATGFG LA+PI+R +E
Sbjct: 148 NSFDPLWNQILVAGLDSDSKPFLASVDLRGTSFTSPSLATGFGAALAQPIMRKYAGTEED 207
Query: 174 HENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL-KTFWGF 228
L+ E V+++++CM+VL YRD ++++ IA + ++G + + L K W F
Sbjct: 208 AAKLTREQAVEVVKECMKVLFYRDARSLDRYSIAVVNKDGIELKEDEQLEKQSWAF 263
>gi|72387538|ref|XP_844193.1| proteasome beta 7 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|12656357|gb|AAK00845.1|AF290945_1 20S proteasome beta 7 subunit [Trypanosoma brucei]
gi|62176539|gb|AAX70645.1| proteasome beta 7 subunit [Trypanosoma brucei]
gi|70800726|gb|AAZ10634.1| proteasome beta 7 subunit [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|261327337|emb|CBH10312.1| proteasome beta 7 subunit, putative [Trypanosoma brucei gambiense
DAL972]
Length = 218
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 127/208 (61%), Gaps = 3/208 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
+G SV+ LKY G+L+A+D SYGS ++ ++ RIK IG H+ + A+G+ +DFQ++
Sbjct: 3 SGGSVIGLKYNGGVLLASDTLLSYGSLAKWPNIPRIKIIGPHTAVCATGDYADFQDMTEQ 62
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
L+ + + + + L P E+ YL R +Y++R+ F+P S V+ G + G +LG +
Sbjct: 63 LESHVERQRRYIN-DVLRPDEIFCYLHRHIYHKRSNFEPCLCSFVVCGCQGGVPFLGGID 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHE--NLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+G + D VATG+G ++A P+LR + LS E+ V++++ C+RVL YR+ A+NK
Sbjct: 122 SVGTQWRDDCVATGYGAYIAIPLLRKALEKPGGLSREEAVEVIKNCLRVLFYRECRAINK 181
Query: 204 LQIAKITEEGTTISQPYALKTFWGFTAF 231
QIA T + I +P+ ++T W + F
Sbjct: 182 FQIADATNDAVEIGKPFEVETNWEYEGF 209
>gi|194770872|ref|XP_001967511.1| GF20703 [Drosophila ananassae]
gi|190618521|gb|EDV34045.1| GF20703 [Drosophila ananassae]
Length = 268
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/216 (36%), Positives = 123/216 (56%), Gaps = 3/216 (1%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QR TG+SV+ +++ G+++AAD SYGS RY+S++R+ I + LLG + +
Sbjct: 48 QRNTARITTGSSVLGIRFDGGVMIAADTMVSYGSLSRYQSIDRVFKINEKILLGGGDDFA 107
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK-N 136
D Q + R +D+ ++ D D + P EL +LTRV+YNRR + +PL+ +V+GGV
Sbjct: 108 DIQSIKRTIDQKMIADQCRADEIEMKPTELAMWLTRVLYNRRTRMNPLFIDVVVGGVNAE 167
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDE--WHENLSYEDGVKLLEKCMRVLL 194
G+ +LG V + G +ED VATGF HLA P++R+ + E+ L+ KCM VL
Sbjct: 168 GKPFLGNVDLRGRFYEDFVVATGFARHLAIPLVRESKPAGREFTAEEASNLIRKCMEVLY 227
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTA 230
YRD +K + T G+ + PY + W F +
Sbjct: 228 YRDTRNTSKYTVGVCTPSGSVVEGPYKVDENWSFAS 263
>gi|389582098|dbj|GAB64498.1| proteasome beta-subunit type 4 [Plasmodium cynomolgi strain B]
Length = 256
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/231 (36%), Positives = 130/231 (56%), Gaps = 33/231 (14%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P VTGTSV+ALKYK GIL+AAD SYGS ++++VERI I +++ SGE++D Q L
Sbjct: 5 PVVTGTSVIALKYKHGILIAADKKASYGSYAKFQNVERIFKINNKTVMSFSGELADAQYL 64
Query: 83 LRNLDELILYDNMWDDGNS---LGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
L + + +N+ D + K H+Y+ R+ YNR+NK DPL+N++++ G+ N Q+
Sbjct: 65 HEVLTRVNV-NNVMDKKSKHDLHNTKYYHAYVGRLFYNRKNKIDPLFNTIIVAGL-NSQE 122
Query: 140 ----------------------------YLGMVSMIGVNFEDSHVATGFGNHLARPILRD 171
Y+G V M G F ++ TG+ + A +LRD
Sbjct: 123 YDDNDKDVLLYSEKHTTDEYKVINKEDLYIGFVDMHGTQFSADYMTTGYARYFALTLLRD 182
Query: 172 EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL 222
+ + ++ E+ LL +C+RVL YRD +A NK+Q+ K+T +G +PY L
Sbjct: 183 RYKDYMTEEEAKTLLNECLRVLYYRDATASNKIQVVKVTSKGVEYEEPYFL 233
>gi|391334414|ref|XP_003741599.1| PREDICTED: proteasome subunit beta type-4-like [Metaseiulus
occidentalis]
Length = 251
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 134/222 (60%), Gaps = 7/222 (3%)
Query: 8 QGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKH 67
Q LV P QRTQ P SV+ L Y++G+L+AADMG + T R RI I ++
Sbjct: 29 QSLVAPR---QRTQEPTYMSGSVIGLCYENGVLLAADMGATTRFT-RIPHQPRILKINEN 84
Query: 68 SLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
+++G SG+ +DFQ L + ++ ++ + ++G + P+ L+ YL+R++Y RRN F+PLW
Sbjct: 85 TMIGVSGDFADFQYLEKIIEAKMIDEERKNEGFQMKPRSLYVYLSRLLYQRRNNFNPLWT 144
Query: 128 SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHE-NLSYEDGVK 184
++++ G+++G+ ++G+V MIG FE + +TGFGN+L ++R+ E H+ L + V+
Sbjct: 145 NIIVTGMQDGKPFMGVVDMIGTAFETNLYSTGFGNYLGMGVMREAVEKHDGKLPLQAAVE 204
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
L+ +RVL YR+ +A QI T G I P + + W
Sbjct: 205 ALQSVLRVLYYRNTAAFPDYQIGNCTASGVKIEGPMRIDSEW 246
>gi|68076731|ref|XP_680285.1| proteasome beta-subunit [Plasmodium berghei strain ANKA]
gi|56501197|emb|CAH98231.1| proteasome beta-subunit, putative [Plasmodium berghei]
Length = 256
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 138/233 (59%), Gaps = 37/233 (15%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQ-- 80
P VTGTSV+ALKY++G+++AAD SYGS ++++V+RI I +++ SGE++D Q
Sbjct: 5 PVVTGTSVIALKYRNGVMIAADKKASYGSYAKFQNVQRIFKISNKTVMSFSGELADAQYL 64
Query: 81 -ELLR--NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
ELL N+++++ + +D ++ K HSY++R+ YNR+NK DPL+N++++ G+ N
Sbjct: 65 HELLTRVNVNDVVEKKSKYDLHDT---KFYHSYVSRLFYNRKNKIDPLFNNIIIAGL-NS 120
Query: 138 QK----------------------------YLGMVSMIGVNFEDSHVATGFGNHLARPIL 169
Q+ Y+G V M G F + ++ TG+ + A +L
Sbjct: 121 QEYDDNDKDILLYSEKQNNEEYKDIDKKDLYIGFVDMHGTQFCEDYITTGYARYFALTLL 180
Query: 170 RDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL 222
R+ + +N++ + LL +C+++L +RD +A NK+QI KIT +G +PY L
Sbjct: 181 RNHYKDNMTEHEARSLLNECLKILYFRDTTASNKIQIVKITSKGVEYEEPYIL 233
>gi|401886762|gb|EJT50782.1| endopeptidase [Trichosporon asahii var. asahii CBS 2479]
Length = 272
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 121/193 (62%), Gaps = 18/193 (9%)
Query: 47 GSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKE 106
SYGS R++ +ER+K +G H++LGA+G++SDFQ R + L L DN +L P+
Sbjct: 75 ASYGSLARFRDIERLKALGTHTVLGAAGDMSDFQ---REEETLKLSDNH----PALAPRN 127
Query: 107 LHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMVSMIGVNFEDSHVATGFGNHL 164
L+++L + Y RR+K +PLWN+ ++GG + + +LG V ++G + +ATGFG HL
Sbjct: 128 LYTFLANLFYARRSKINPLWNACIIGGWDFEKDEPFLGYVDLLGTTYTAPTLATGFGMHL 187
Query: 165 ARPILRDEWHEN---------LSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTT 215
A+P+LR+ + L+ + +L +CM+VL YRD ++NK Q+AK+T+EG
Sbjct: 188 AQPLLREAYEAKAGIDGKGDLLTEAEAEAVLNECMKVLYYRDARSMNKYQLAKVTKEGVK 247
Query: 216 ISQPYALKTFWGF 228
IS + +T+WGF
Sbjct: 248 ISDSKSAETYWGF 260
>gi|82705582|ref|XP_727029.1| proteasome subunit beta [Plasmodium yoelii yoelii 17XNL]
gi|23482682|gb|EAA18594.1| proteasome beta-subunit [Plasmodium yoelii yoelii]
Length = 256
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 138/233 (59%), Gaps = 37/233 (15%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQ-- 80
P VTGTSV+ALKY++G+++AAD SYGS ++++V+RI I +++ SGE++D Q
Sbjct: 5 PVVTGTSVIALKYRNGVMIAADKKASYGSYAKFQNVQRIFKISNKTVMSFSGELADAQYL 64
Query: 81 -ELLR--NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
ELL N+++++ +D ++ K HSY++R+ YNR+NK DPL+N++++ G+ N
Sbjct: 65 HELLTRVNVNDVVEKKTKYDLHDT---KFYHSYVSRLFYNRKNKIDPLFNNIIIAGL-NS 120
Query: 138 QK----------------------------YLGMVSMIGVNFEDSHVATGFGNHLARPIL 169
Q+ Y+G V M G F + ++ TG+ + A +L
Sbjct: 121 QEYDDNDKDILLYSEKQNNEEYKDIDKKDLYIGFVDMHGTQFCEDYITTGYARYFALTLL 180
Query: 170 RDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYAL 222
R+ + +N++ ++ LL +C+++L +RD +A NK+QI K+T +G +PY L
Sbjct: 181 RNHYKDNMTEDEARSLLNECLKILYFRDTTASNKIQIVKVTSKGVEYEEPYIL 233
>gi|448102581|ref|XP_004199839.1| Piso0_002386 [Millerozyma farinosa CBS 7064]
gi|359381261|emb|CCE81720.1| Piso0_002386 [Millerozyma farinosa CBS 7064]
Length = 275
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 138/216 (63%), Gaps = 13/216 (6%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P +TGTSV+A+K+ G++MAAD G+YGS +R+ ++ERI +G +++G SG+
Sbjct: 41 PSMHTQRPIITGTSVLAVKFNGGVIMAADNVGAYGSLLRFSNIERIIKVGDETVVGISGD 100
Query: 76 ISDFQELLRNLDELILYDNMWDD--GNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
ISD Q + R L+EL ++++D G+ L +H YL++VMYNRR+K +PLWN++V+ G
Sbjct: 101 ISDMQYIERLLEELETEEDIYDSDGGHKLRAPHVHEYLSQVMYNRRSKMNPLWNAIVVAG 160
Query: 134 VKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILR-----DEWHENLSYEDGVKLLE 187
+ ++ +L V ++GV + S +ATGFG++LA P+LR D + +S E+ + +
Sbjct: 161 FDDTKEPFLRYVDLLGVAYGSSAIATGFGSYLAVPLLRNLVPYDADYPKVSEEEARETIV 220
Query: 188 KCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK 223
CM+VL YRD + K + + ++ QP A +
Sbjct: 221 NCMKVLYYRDARSSEKFSLVTLRKD-----QPLAFE 251
>gi|67473671|ref|XP_652586.1| proteasome subunit beta Type 4 precursor [Entamoeba histolytica
HM-1:IMSS]
gi|56469453|gb|EAL47200.1| proteasome subunit beta Type 4 precursor, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 225
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 125/210 (59%), Gaps = 1/210 (0%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PIQ+ + SV+ +KY+ G+L+AAD GSYGS +K +ER+ +GK++++ SGE
Sbjct: 8 PIQQPAEVVLGTASVLGIKYEGGVLIAADTLGSYGSMALFKDLERVIKLGKYTIIAGSGE 67
Query: 76 ISDFQELLRNLDELILYDNMWD-DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
SDF EL L + + D + N P EL+SY R++Y R PL+ +L++GGV
Sbjct: 68 YSDFIELNETLQKKVNGDECCEGKENGYKPSELYSYAQRILYKHRCDQKPLFVTLIVGGV 127
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLL 194
K + +LG M G +F +++VA+G G H+A P+LR EW +++S E+ L+E+CM++L
Sbjct: 128 KKDEIFLGQTDMYGTSFTENYVASGIGAHMAMPLLRKEWKDHMSREEAEHLIERCMKILY 187
Query: 195 YRDRSAVNKLQIAKITEEGTTISQPYALKT 224
A N+ + + EG+ I P + T
Sbjct: 188 LNHCWAGNQYLLGVVDSEGSDIIGPITIDT 217
>gi|389610131|dbj|BAM18677.1| proteasome beta7 subunit [Papilio xuthus]
Length = 262
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/205 (37%), Positives = 124/205 (60%), Gaps = 1/205 (0%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P T ++V+ +K+ G ++AAD GSYGS R++ R+ + LLG+ G+ +D+Q L
Sbjct: 49 PITTTSTVIGIKFDKGCVIAADTLGSYGSLARFRDCPRVLKVNDLILLGSGGDYADYQYL 108
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
+++ I+ + DG L PK LH +LTRV+YN+R+K DPLW++ V+ G+++G+ +LG
Sbjct: 109 RDIIEQKIIDEQCIGDGLQLKPKSLHCWLTRVLYNKRSKMDPLWSNYVVAGIQDGEPFLG 168
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN-LSYEDGVKLLEKCMRVLLYRDRSAV 201
V +G +ED+ +ATG G ++A P+LRD + L+ E L KCM VL YRD +
Sbjct: 169 AVDKLGTAYEDAAIATGMGAYMATPLLRDVLDKGPLNEESAKALARKCMEVLYYRDARSF 228
Query: 202 NKLQIAKITEEGTTISQPYALKTFW 226
+ Q+ +T G + +P + W
Sbjct: 229 PRYQLGVVTAAGVVVEEPTEIGQNW 253
>gi|225714454|gb|ACO13073.1| Proteasome subunit beta type-4 precursor [Lepeophtheirus salmonis]
gi|290462171|gb|ADD24133.1| Proteasome subunit beta type-4 [Lepeophtheirus salmonis]
gi|290561042|gb|ADD37923.1| Proteasome subunit beta type-4 [Lepeophtheirus salmonis]
Length = 251
Score = 153 bits (386), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 129/219 (58%), Gaps = 4/219 (1%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
+P + P TG+SV +KY +G+LM AD SYG RY +V+R+ + + +++ +
Sbjct: 25 KNPTTVSAYPIATGSSVFGIKYDEGVLMGADTLVSYGKMARYPNVQRLYKVNESTVITCT 84
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
G+ +DFQE+ L+ + + + + ++ P+ LH YLTR +Y +R FDP W ++V+GG
Sbjct: 85 GDFADFQEITSMLERMQIEEERTQNEVTMQPRSLHIYLTRYLYKKRTDFDPKWTNIVVGG 144
Query: 134 VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR--DEWHEN--LSYEDGVKLLEKC 189
+++G YLG ++MIG+ + + V TG G +A P++R + H + L++ + ++E+
Sbjct: 145 MQDGVPYLGYINMIGLAYTEDAVTTGLGGSIALPLMRKLKDQHPDRALTFNEACGVMEES 204
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
+++ D A K QIA IT+EG I +P + W +
Sbjct: 205 LKLGFALDCVAYPKFQIATITKEGVKIGEPQTVALDWKY 243
>gi|71027645|ref|XP_763466.1| 20S proteasome subunit beta 7 [Theileria parva strain Muguga]
gi|68350419|gb|EAN31183.1| 20S proteasome beta 7 subunit, putative [Theileria parva]
Length = 229
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 76/218 (34%), Positives = 124/218 (56%), Gaps = 4/218 (1%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
YVTG S++A+KY +G+LM D S G RY +V R++ + ++L SG+ +D Q L
Sbjct: 4 YVTGASIIAMKYNEGVLMMTDTKWSLGRMARYMNVLRLESVSSNTLFATSGDAADHQYLT 63
Query: 84 RNLDELILYDNMWDDGNS----LGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
R L + D + + ++ L P+ L +Y +R++Y+RR K DP+ S V+GG+ NG+
Sbjct: 64 RVLKHAVHTDLLEHNNDASKALLNPEMLLNYTSRLLYHRRTKLDPVLVSAVVGGLSNGKP 123
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
+LG G + D+ V TG G + A LR+E ++S + +L KCMRVL RD
Sbjct: 124 FLGYTDYYGTKYTDNFVVTGLGKYFAIGPLREEHRNDMSLSEAKELALKCMRVLYLRDCQ 183
Query: 200 AVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAG 237
A ++Q+ + ++G + +P+ L + W F F PT+
Sbjct: 184 ASVRVQVGFVNKDGVFVEEPFVLDSKWDFKKFAAPTSA 221
>gi|406698704|gb|EKD01933.1| endopeptidase [Trichosporon asahii var. asahii CBS 8904]
Length = 272
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 120/193 (62%), Gaps = 18/193 (9%)
Query: 47 GSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKE 106
SYGS R++ +ER+K +G H++LGA+G++SDFQ R + L L DN +L P+
Sbjct: 75 ASYGSLARFRDIERLKALGTHTVLGAAGDMSDFQ---REEETLKLSDNH----PALAPRN 127
Query: 107 LHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMVSMIGVNFEDSHVATGFGNHL 164
L+++L + Y RR+K +PLWN+ ++GG + + +LG V ++G + +ATGFG HL
Sbjct: 128 LYTFLANLFYARRSKINPLWNACIIGGWDFEKDEPFLGYVDLLGTTYTAPTLATGFGMHL 187
Query: 165 ARPILRDEWHEN---------LSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTT 215
A+P LR+ + L+ + +L +CM+VL YRD ++NK Q+AK+T+EG
Sbjct: 188 AQPPLREAYEAKAGIDGKGDLLTEAEAEAVLNECMKVLYYRDARSMNKYQLAKVTKEGVK 247
Query: 216 ISQPYALKTFWGF 228
IS + +T+WGF
Sbjct: 248 ISDSKSAETYWGF 260
>gi|71414883|ref|XP_809527.1| proteasome beta 7 subunit [Trypanosoma cruzi strain CL Brener]
gi|70873924|gb|EAN87676.1| proteasome beta 7 subunit, putative [Trypanosoma cruzi]
Length = 218
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 128/208 (61%), Gaps = 3/208 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
+G SV+ +KY G+L+A D SYGS ++ ++ R+K +G ++++ A+G+ +DFQE+
Sbjct: 3 SGGSVIGVKYNGGVLLACDTLLSYGSLAKWPNIPRMKLVGAYTVMCATGDYADFQEMTTM 62
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
++ + M+ G +L P E+ YL R +Y++R++F+P V+ G G+ +LG V
Sbjct: 63 IENHVNRQQMYG-GGALTPNEVFCYLQRHVYHKRSQFEPCLCRFVVAGCHGGEPFLGGVD 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHE--NLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+G + D VA G+G ++A P+LR + L+ E+ +++++ C+RVL YR+ A+NK
Sbjct: 122 DVGTRWTDDCVAAGYGAYIALPLLRQALEKPGGLTREEAIRVIKDCLRVLFYRECRAINK 181
Query: 204 LQIAKITEEGTTISQPYALKTFWGFTAF 231
QIA T + +I +P+ ++T W + F
Sbjct: 182 FQIADATSDMVSIGEPFEVETNWEYDGF 209
>gi|340053064|emb|CCC47349.1| proteasome beta 7 subunit [Trypanosoma vivax Y486]
Length = 218
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 124/208 (59%), Gaps = 3/208 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
+G SVV LKY G+L+A+D SYGS ++ ++ RIK IG H+ + A+G+ +DFQ++
Sbjct: 3 SGGSVVGLKYNGGVLLASDTLLSYGSLAKWPNIPRIKLIGSHTAICATGDYADFQDMTEL 62
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
L + ++ +G +L PKE+ YL R +Y++R+ F+P V+ G G+ +LG V
Sbjct: 63 LSSHVNQLKVYGNG-ALQPKEVFCYLQRNVYHKRSNFEPCLCQFVVAGCHGGEPFLGGVD 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHE--NLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+G + D VATG+G H+A P+LR + LS + +++L C+RVL YR+ +NK
Sbjct: 122 DVGTQWVDDCVATGYGAHIALPLLRQALEKPGGLSRGEALEVLRNCLRVLFYRECRTINK 181
Query: 204 LQIAKITEEGTTISQPYALKTFWGFTAF 231
QIA T + +P+ ++T W + F
Sbjct: 182 FQIADATNNVVVLGEPFEVETNWEYEGF 209
>gi|407851136|gb|EKG05245.1| proteasome beta 7 subunit, putative [Trypanosoma cruzi]
Length = 218
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 128/208 (61%), Gaps = 3/208 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
+G SV+ +KY G+L+A D SYGS ++ ++ R+K +G ++++ A+G+ +DFQE+
Sbjct: 3 SGGSVIGVKYNGGVLLACDTLLSYGSLAKWPNIPRMKLVGAYTVMCATGDYADFQEMTTM 62
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
++ + M+ G +L P E+ YL R +Y++R++F+P V+ G G+ +LG V
Sbjct: 63 IENHVNRQQMYG-GGALTPNEVFCYLQRHVYHKRSQFEPCLCRFVVAGCHGGEPFLGGVD 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHE--NLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+G + D VA G+G ++A P+LR + L+ E+ +++++ C+RVL YR+ A+NK
Sbjct: 122 DVGTRWTDDCVAAGYGAYVALPLLRQALEKPGGLTREEAIRVIKDCLRVLFYRECRAINK 181
Query: 204 LQIAKITEEGTTISQPYALKTFWGFTAF 231
QIA T + +I +P+ ++T W + F
Sbjct: 182 FQIADATSDMVSIGEPFEVETNWEYDGF 209
>gi|225712056|gb|ACO11874.1| Proteasome subunit beta type-4 precursor [Lepeophtheirus salmonis]
Length = 270
Score = 150 bits (380), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 129/219 (58%), Gaps = 4/219 (1%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
+P + P TG+SV +KY +G+LM AD SYG RY +V+R+ + + +++ +
Sbjct: 25 KNPTTVSAYPIATGSSVFGIKYDEGVLMGADTLVSYGKMARYPNVQRLYKVNESTVITCT 84
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
G+ +DFQE+ L+ + + + + ++ P+ LH YLTR +Y +R FDP W ++V+GG
Sbjct: 85 GDFADFQEITSMLERMQIEEERTQNEVTMQPRSLHIYLTRYLYKKRTDFDPKWTNIVVGG 144
Query: 134 VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR--DEWHEN--LSYEDGVKLLEKC 189
+++G YLG ++MIG+ + + V TG G +A P++R + H + L++ + ++E+
Sbjct: 145 MQDGVPYLGYINMIGLAYTEDAVTTGLGGSIALPLMRKLKDQHPDRALTFNEARGVMEES 204
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
+++ D A K QIA IT+EG I +P + W +
Sbjct: 205 LKLGFALDCVAYPKFQIATITKEGVKIGEPQTVALDWKY 243
>gi|401826263|ref|XP_003887225.1| proteasome beta type-4 subunit [Encephalitozoon hellem ATCC 50504]
gi|392998384|gb|AFM98244.1| proteasome beta type-4 subunit [Encephalitozoon hellem ATCC 50504]
Length = 226
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 125/216 (57%), Gaps = 18/216 (8%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
+VTGTSVV+ KYKDGI+M AD GSYG +Y ++R+ G +L+G SGE+SD Q L+
Sbjct: 4 FVTGTSVVSFKYKDGIIMGADTRGSYGRLAKYSGIQRMFKFGDKTLIGISGEVSDMQYLV 63
Query: 84 RNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG------ 137
+ L+ L DN D PK H + R++Y+ R++ PL S+ +GG+ G
Sbjct: 64 KTLNILTEEDNRGID-----PKGYHKIIQRILYSARSRISPLNLSVCVGGINAGHERGCA 118
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEW---HENLSYEDGVKLLEKCM 190
+K LG V+ +G + + TG G+++A P LR + + ++ E+ L+E+ M
Sbjct: 119 ISNEKKMLGCVNHLGNFYFSDVICTGIGSYIALPFLRSKVEGREDEITREEATSLIEETM 178
Query: 191 RVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
R+L YRD +A N++QI +G IS PY L+T W
Sbjct: 179 RILCYRDCNASNEIQIGYADSQGVHISDPYPLETNW 214
>gi|396081342|gb|AFN82959.1| proteasome type-4 subunit beta [Encephalitozoon romaleae SJ-2008]
Length = 224
Score = 150 bits (380), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 124/214 (57%), Gaps = 16/214 (7%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
+VTGTSV++ KYKDG++M AD GSYG +Y ++R+ G +L+G SGE+SD Q L+
Sbjct: 4 FVTGTSVISFKYKDGVMMGADTRGSYGRLAKYSGIQRMFKFGDQTLIGISGEVSDMQYLV 63
Query: 84 RNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG------ 137
+ L L DN + PK H + R++Y+ R+K PL S+ +GG +
Sbjct: 64 KTLSILTEEDN-----RGIDPKGYHKIVQRMLYSARSKIRPLNLSVCVGGTRCDDDSMTH 118
Query: 138 --QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDE---WHENLSYEDGVKLLEKCMRV 192
+K LG V +G + + TG G+++A P LR + + ++ E+G+ L+E+ MR+
Sbjct: 119 CERKMLGCVDRLGNFYFSDVICTGIGSYIALPFLRSKVEGREDEITREEGINLIEETMRI 178
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
L YRD +A N++QI +G IS PY LKT W
Sbjct: 179 LCYRDCNASNEIQIGYSDSQGVHISDPYPLKTNW 212
>gi|195134534|ref|XP_002011692.1| GI10953 [Drosophila mojavensis]
gi|193906815|gb|EDW05682.1| GI10953 [Drosophila mojavensis]
Length = 448
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 117/203 (57%), Gaps = 3/203 (1%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
+SVV +K+ DG+++AAD YG+ RY+ V+R+ I ++++LG + +D Q ++R +
Sbjct: 237 ASSVVGVKFDDGVMIAADTLVVYGNACRYQDVDRVMRINRNTILGGGRDFADVQAVVRTI 296
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK-NGQKYLGMVS 145
I+ D+ + DG+ L PK LHS++TR++Y+RRNK D L LV+GG+ N + YLG V
Sbjct: 297 SHKIIEDHCFQDGHHLSPKSLHSWMTRLLYSRRNKRDKLDVDLVIGGMTPNNKPYLGYVD 356
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEW--HENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
G V TGF L P++R+ H +Y + V L +CM+VL YRD ++
Sbjct: 357 SRGTALTSDVVTTGFSRVLVEPLIRERQPRHRPFTYVEAVNALRECMKVLFYRDTRSIEY 416
Query: 204 LQIAKITEEGTTISQPYALKTFW 226
I + + I P+ KT W
Sbjct: 417 YTIGVCSRDECKIKGPFKAKTCW 439
>gi|407411734|gb|EKF33677.1| proteasome beta 7 subunit, putative [Trypanosoma cruzi marinkellei]
Length = 218
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 127/208 (61%), Gaps = 3/208 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
+G SV+ +KY G+L+A+D SYGS ++ ++ R+K +G ++++ A+G+ +DFQE+
Sbjct: 3 SGGSVIGVKYNGGVLLASDTLLSYGSLAKWPNIPRMKLVGAYTVMCATGDYADFQEMTTM 62
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
++ + M+ G +L P E+ YL R +Y++R++F+P V+ G G+ +LG V
Sbjct: 63 IENHVNRQQMYG-GGALTPNEVFCYLQRHVYHKRSEFEPCLCRFVVAGCHGGEPFLGGVD 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHE--NLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+G + D VA G+G ++A P+LR + L+ E+ +++++ C+RVL YR+ A+NK
Sbjct: 122 DVGTRWTDDCVAAGYGAYIALPLLRQALEKPGGLTREEAIRVIKDCLRVLFYRECRAINK 181
Query: 204 LQIAKITEEGTTISQPYALKTFWGFTAF 231
QIA T + I +P+ + T W + F
Sbjct: 182 FQIADATSDMVAIGEPFEVDTNWEYDGF 209
>gi|303389207|ref|XP_003072836.1| proteasome type-4 subunit beta [Encephalitozoon intestinalis ATCC
50506]
gi|303301979|gb|ADM11476.1| proteasome type-4 subunit beta [Encephalitozoon intestinalis ATCC
50506]
Length = 235
Score = 149 bits (376), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 80/216 (37%), Positives = 124/216 (57%), Gaps = 18/216 (8%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
+VTGTSVV+ +YKDGI+M AD SYG ++ V+R+ G +L+G SGE+SD Q L+
Sbjct: 13 FVTGTSVVSFRYKDGIIMGADAKASYGRLTKFNGVQRMFKFGSRTLVGISGEVSDMQYLI 72
Query: 84 RNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK-------- 135
+ L+ L DN + PK H + R++Y+ R++ PL S+ +GGVK
Sbjct: 73 KTLNILTEEDN-----REIDPKGYHKMVQRILYSARSRISPLNLSVCVGGVKTVRNSEEE 127
Query: 136 --NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDE---WHENLSYEDGVKLLEKCM 190
+K LG V +G + + TG G++LA P LR + + ++ E+ ++L+E+ M
Sbjct: 128 FETNEKTLGCVDRLGNFYFSDVICTGIGSYLALPFLRSKVEGREQEITREEAIRLVEEAM 187
Query: 191 RVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
+L YRD +A N++QI +G IS PY +KT W
Sbjct: 188 EILCYRDCNASNEVQIGYADSQGVHISDPYLIKTNW 223
>gi|183233581|ref|XP_001913879.1| calcium-dependent protein kinase 2 [Entamoeba histolytica
HM-1:IMSS]
gi|169801508|gb|EDS89346.1| calcium-dependent protein kinase 2, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 413
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
SV+ +KY+ G+L+AAD GSYGS +K +ER+ +GK++++ SGE SDF EL L
Sbjct: 208 ASVLGIKYEGGVLIAADTLGSYGSMALFKDLERVIKLGKYTIIAGSGEYSDFIELNETLQ 267
Query: 88 ELILYDNMWD-DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
+ + D + N P EL+SY R++Y R PL+ +L++GGVK + +LG M
Sbjct: 268 KKVNGDECCEGKENGYKPSELYSYAQRILYKHRCDQKPLFVTLIVGGVKKDEIFLGQTDM 327
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
G +F +++VA+G G H+A P+LR EW +++S E+ L+E+CM++L A N+ +
Sbjct: 328 YGTSFTENYVASGIGAHMAMPLLRKEWKDHMSREEAEHLIERCMKILYLNHCWAGNQYLL 387
Query: 207 AKITEEGTTISQPYALKT 224
+ EG+ I P + T
Sbjct: 388 GVVDSEGSDIIGPITIDT 405
>gi|449709845|gb|EMD49031.1| calcium-dependent protein kinase, putative [Entamoeba histolytica
KU27]
Length = 413
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 120/198 (60%), Gaps = 1/198 (0%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
SV+ +KY+ G+L+AAD GSYGS +K +ER+ +GK++++ SGE SDF EL L
Sbjct: 208 ASVLGIKYEGGVLIAADTLGSYGSMALFKDLERVIKLGKYTIIAGSGEYSDFIELNETLQ 267
Query: 88 ELILYDNMWD-DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
+ + D + N P EL+SY R++Y R PL+ +L++GGVK + +LG M
Sbjct: 268 KKVNGDECCEGKENGYKPSELYSYAQRILYKHRCDQKPLFVTLIVGGVKKDEIFLGQTDM 327
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
G +F +++VA+G G H+A P+LR EW +++S E+ L+E+CM++L A N+ +
Sbjct: 328 YGTSFTENYVASGIGAHMAMPLLRKEWKDHMSREEAEHLIERCMKILYLNHCWAGNQYLL 387
Query: 207 AKITEEGTTISQPYALKT 224
+ EG+ I P + T
Sbjct: 388 GVVDSEGSDIIGPITIDT 405
>gi|440301051|gb|ELP93498.1| proteasome subunit beta type-4 precursor, putative [Entamoeba
invadens IP1]
Length = 234
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/220 (32%), Positives = 126/220 (57%), Gaps = 11/220 (5%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P++ + + S+V +KY G+++A D SYGS + + RI +GKH+++ ASGE
Sbjct: 7 PMKHAEGVLLGTASIVGIKYNGGVILATDTLASYGSMVYSNQINRIDRLGKHTIIAASGE 66
Query: 76 ISDFQELLRNLDELILYDNMW-----------DDGNSLGPKELHSYLTRVMYNRRNKFDP 124
+SD+QE+ + + + ++ + G LGPKEL SYL R+MY +R P
Sbjct: 67 LSDYQEIKNVMMKKVNGESTTDDAEEDEEDKKNSGKGLGPKELFSYLNRMMYQKRTDMKP 126
Query: 125 LWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVK 184
L+N++V+ GVK+ + +LG M G +FE+++V+TG G H+ P++R EW+ + E +
Sbjct: 127 LYNTVVVAGVKDKKVFLGQTDMYGTSFEENYVSTGIGAHMVIPLIRKEWNAEFTQEQALS 186
Query: 185 LLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT 224
L+++C ++L A + A +T+ +S+P + T
Sbjct: 187 LIKRCFQILYLNHCFAGKMYKTAIVTDNKVEMSEPITIDT 226
>gi|85000827|ref|XP_955132.1| proteasome subunit [Theileria annulata strain Ankara]
gi|65303278|emb|CAI75656.1| proteasome subunit, putative [Theileria annulata]
Length = 229
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/218 (35%), Positives = 119/218 (54%), Gaps = 4/218 (1%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
YVTG S++A+KY DG+LM D S G RY +V+R++ + ++L SG+ +D Q L
Sbjct: 4 YVTGASIIAMKYNDGVLMMTDTKWSLGRMARYMNVKRLEGVSSNTLFATSGDAADHQYLT 63
Query: 84 RNLDELILYDNMWDDGNS----LGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
R L + D + + + L + L +Y +R +Y+RR K DP+ S V+GG NG+
Sbjct: 64 RILKHAVHTDLLEHNNDPSEALLNAEMLLNYTSRFLYHRRTKLDPVLVSAVVGGFANGKS 123
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
+LG G + D V TG G + A LR+E + + + +L KCMRVL RD
Sbjct: 124 FLGYTDYYGTKYTDDFVVTGLGKYFAIGPLREEHRNDFTLSEAKELALKCMRVLYLRDCQ 183
Query: 200 AVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAG 237
A ++Q+ + ++G I +P+ L T W F F PT+
Sbjct: 184 ASLRVQVGYVNKDGVFIEEPFLLDTKWDFKKFAAPTSA 221
>gi|402086350|gb|EJT81248.1| hypothetical protein GGTG_01232 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 284
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 85/243 (34%), Positives = 131/243 (53%), Gaps = 31/243 (12%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
Q TQ P VTGTSV+ LK+KDG+++AAD SYGS R+ S R++ S++G G++S
Sbjct: 31 QATQAPVVTGTSVIGLKFKDGVVIAADNLASYGSLARFTSTHRLRSFANSSVVGFGGDVS 90
Query: 78 DFQELLRNLDELIL---YDNMWDDG---------------------NSLGPKELHSYLTR 113
D Q L R+L EL + Y N D N L LH YL++
Sbjct: 91 DMQYLDRHLMELAIDEAYANPPDSSLPEAAGEGDDEGRTTAAEERKNGLNAANLHKYLSK 150
Query: 114 VMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILR-- 170
++Y RRNKFDPLWN +++ G+ + +L + G F +A+G+G+ LA PI+R
Sbjct: 151 LLYGRRNKFDPLWNQILVAGLDADDAPFLASADLRGTVFSAPALASGYGSMLAIPIMRKV 210
Query: 171 ---DEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK-TFW 226
+E +L+ ++ V ++ +CM+VL YRD + + +A +T+ G +S L+ W
Sbjct: 211 AATEEDAASLARDEAVAVVRECMKVLFYRDARSHDSYSLAVVTKAGVELSTEERLQDQSW 270
Query: 227 GFT 229
F
Sbjct: 271 AFA 273
>gi|225719778|gb|ACO15735.1| Proteasome subunit beta type-4 precursor [Caligus clemensi]
Length = 254
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 126/223 (56%), Gaps = 4/223 (1%)
Query: 10 LVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSL 69
L P + P TG+SV +KY G+L+ AD SYG RY +V R+ + ++
Sbjct: 24 LATEKSPTAVSAYPIATGSSVFGIKYDGGVLLGADTLVSYGKMARYPNVPRLFQVNDTTV 83
Query: 70 LGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
+ SG+ +DFQ + ++ + + + + + P+ LH YLTR +YN R+KFDP W ++
Sbjct: 84 ITCSGDYADFQHITSLVERMQIEEERTQNEVVMQPRSLHRYLTRYLYNLRSKFDPKWTNI 143
Query: 130 VLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN----LSYEDGVKL 185
V+ G+++G+ +LG +SMIG+ F + V TG G +A P++R +N L++E+ K+
Sbjct: 144 VVAGLQDGEPFLGYISMIGLAFTEDAVTTGLGGAIALPLMRKMLDQNKGKLLTFEEATKI 203
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
+E+ +++ D A K QIA I ++G + +P + W +
Sbjct: 204 MEESLKLGFALDCVAYPKYQIANINKDGVQMGKPETVSLNWKY 246
>gi|225719784|gb|ACO15738.1| Proteasome subunit beta type-4 precursor [Caligus clemensi]
Length = 254
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 126/223 (56%), Gaps = 4/223 (1%)
Query: 10 LVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSL 69
L P + P TG+SV +KY G+L+ AD SYG RY +V R+ + ++
Sbjct: 24 LATEKSPTAVSAYPIATGSSVFGIKYDGGVLLGADTLVSYGKMARYPNVPRLFQVNDTTV 83
Query: 70 LGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
+ SG+ +DFQ + ++ + + + + + P+ LH YLTR +YN R+KFDP W ++
Sbjct: 84 ITCSGDYADFQHITSLVERMQIEEERTQNEVVMQPRSLHRYLTRYLYNLRSKFDPKWTNI 143
Query: 130 VLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN----LSYEDGVKL 185
V+ G+++G+ +LG +SMIG+ F + V TG G +A P++R +N L++E+ K+
Sbjct: 144 VVAGLQDGEPFLGYISMIGLAFTEDAVTTGLGGAIALPLMRKMLDQNKGKRLTFEEATKI 203
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGF 228
+E+ +++ D A K QIA I ++G + +P + W +
Sbjct: 204 MEESLKLGFALDCVAYPKYQIANINKDGVQMGKPETVSLNWKY 246
>gi|403223014|dbj|BAM41145.1| proteasome subunit [Theileria orientalis strain Shintoku]
Length = 229
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 78/218 (35%), Positives = 125/218 (57%), Gaps = 4/218 (1%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQ--- 80
YVTG +VVALK+ +G+LM AD S G RY +V+R++ + K++LL SG+ +D Q
Sbjct: 4 YVTGAAVVALKFDEGVLMIADTKLSLGRMARYMNVKRMQEVSKNTLLCCSGDAADHQYLS 63
Query: 81 ELLRNLDELILYDNMWDDGNSLGPKE-LHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
+LL+ + + L + D+ +L E L +Y +RV+Y+RR K DP+ S V+GG G+
Sbjct: 64 DLLKRVVQTELLAHRNDESKTLLNAEMLLNYTSRVLYSRRTKLDPVLVSAVVGGFSRGEP 123
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
+LG G + D V TG G + A LR+E +S + L +CMR+L RD +
Sbjct: 124 FLGYTDYYGTKYTDDFVVTGLGKYFAIGPLREEHRPTMSLAEARDLAVRCMRLLYLRDCT 183
Query: 200 AVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPTAG 237
A ++Q+ +T+ G + +P+ L + W + F PT+
Sbjct: 184 ASVRVQVGYVTKNGVFVDEPFLLDSKWDYAKFAAPTSA 221
>gi|302501488|ref|XP_003012736.1| hypothetical protein ARB_00987 [Arthroderma benhamiae CBS 112371]
gi|291176296|gb|EFE32096.1| hypothetical protein ARB_00987 [Arthroderma benhamiae CBS 112371]
Length = 238
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 129/221 (58%), Gaps = 31/221 (14%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P TQ P VTGTSV+A+K+KDG+++A+D +L+G G+
Sbjct: 29 PTTHTQRPIVTGTSVIAVKFKDGVVIASD-----------------------NLVGFGGD 65
Query: 76 ISDFQELLRNLDELILYDNMWDDG-NSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+SD Q + R L+ L + +N G +SL K LH+YL++++Y RR+KFDPLWN +++ G+
Sbjct: 66 VSDMQYIDRVLNSLDIQENYSTYGEHSLNAKNLHTYLSKLLYQRRSKFDPLWNHILVAGL 125
Query: 135 KN-GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE-----NLSYEDGVKLLEK 188
+ G+ +L ++G + +ATGFG HLA PILR + E N++ E V +++
Sbjct: 126 DDEGKPFLSSADLLGTTYSAPALATGFGAHLAVPILRRLFPEENGIDNITKEQAVDAMKQ 185
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGF 228
CMRVL YRD + ++ IA +T++G + + AL+ W F
Sbjct: 186 CMRVLFYRDARSSDRYSIAVVTKDGVELKENEALENQSWAF 226
>gi|379994194|gb|AFD22724.1| proteasome subunit beta type 4, partial [Collodictyon triciliatum]
Length = 179
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/173 (37%), Positives = 112/173 (64%)
Query: 44 DMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLG 103
D SYG+ R+ + +R + + ++ A G++SDFQE+++ + L G S+
Sbjct: 4 DTLASYGNMSRFMNFQRAVKVNEQVVIAAQGDLSDFQEIIKKAESLSTEHYSDATGKSIS 63
Query: 104 PKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNH 163
P+E++ YL R++YNRRNKFDPLWN++V+ G ++G+ +LG+V ++G +E+ VATG G +
Sbjct: 64 PREMYCYLGRMLYNRRNKFDPLWNNIVVAGHQDGKGFLGVVDLVGTCYEEDVVATGMGLY 123
Query: 164 LARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTI 216
A ILR ++ +++ E+ LL+K V YRD+S +++ Q++ IT EG T+
Sbjct: 124 FAITILRKDYKPDMTLEEATTLLKKAALVQYYRDKSTIDQWQLSVITGEGATV 176
>gi|349805563|gb|AEQ18254.1| putative proteasome subunit beta type-4 [Hymenochirus curtipes]
Length = 158
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 100/143 (69%), Gaps = 2/143 (1%)
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+D++++ + + DG++ PK +HS+LTRVMYNRR+K +PLWN++V+GG NG+ +LG V
Sbjct: 6 IDQMVIDEELVGDGHNYSPKAIHSWLTRVMYNRRSKMNPLWNTVVIGGFYNGESFLGYVD 65
Query: 146 MIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+GV FE +ATGFG +LA+P++RD E L+ ++ +L+E+CM+VL YRD + N+
Sbjct: 66 KLGVAFEAPTIATGFGAYLAQPLMRDAVENKPTLTKDEARQLVERCMKVLYYRDARSYNR 125
Query: 204 LQIAKITEEGTTISQPYALKTFW 226
+I +TE G I P + +T W
Sbjct: 126 FEITTVTESGVEIEGPLSSETNW 148
>gi|19173566|ref|NP_597369.1| 26S PROTEASOME BETA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
gi|74664206|sp|Q8SS01.1|PSB7_ENCCU RecName: Full=Probable proteasome subunit beta type-7; AltName:
Full=26S proteasome beta-type subunit PRE4; AltName:
Full=Multicatalytic endopeptidase complex subunit PRE4
Length = 235
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 124/216 (57%), Gaps = 18/216 (8%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
+VTGT+VV+ +Y+DGI+M AD GSYG + V+RI +G +LLG SGEISD Q L+
Sbjct: 13 FVTGTTVVSFRYRDGIIMGADTRGSYGRLAKLSGVQRIFKVGDQTLLGMSGEISDMQYLV 72
Query: 84 RNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG------ 137
+ L L DN D PK H + R++Y+ R+K PL S+ +GG+
Sbjct: 73 KTLTILTQEDNRRID-----PKGYHKMIQRILYSARSKISPLNLSVCVGGLNAASDGDRR 127
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH---ENLSYEDGVKLLEKCM 190
+K LG V+ +G + V TG G +L P LR+ E ++ E+ + L+E+ M
Sbjct: 128 THTREKMLGCVNHLGNFYFSDVVCTGIGGYLVLPFLRNRVEGREEEIAREEAIGLVEEAM 187
Query: 191 RVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
R+L YRD +A N++Q+ + ++G IS PY +KT W
Sbjct: 188 RILCYRDCNASNEIQVGYVDDQGVHISDPYQIKTNW 223
>gi|392512647|emb|CAD26546.2| 26S PROTEASOME BETA-TYPE SUBUNIT [Encephalitozoon cuniculi GB-M1]
Length = 226
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 124/216 (57%), Gaps = 18/216 (8%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
+VTGT+VV+ +Y+DGI+M AD GSYG + V+RI +G +LLG SGEISD Q L+
Sbjct: 4 FVTGTTVVSFRYRDGIIMGADTRGSYGRLAKLSGVQRIFKVGDQTLLGMSGEISDMQYLV 63
Query: 84 RNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG------ 137
+ L L DN D PK H + R++Y+ R+K PL S+ +GG+
Sbjct: 64 KTLTILTQEDNRRID-----PKGYHKMIQRILYSARSKISPLNLSVCVGGLNAASDGDRR 118
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH---ENLSYEDGVKLLEKCM 190
+K LG V+ +G + V TG G +L P LR+ E ++ E+ + L+E+ M
Sbjct: 119 THTREKMLGCVNHLGNFYFSDVVCTGIGGYLVLPFLRNRVEGREEEIAREEAIGLVEEAM 178
Query: 191 RVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
R+L YRD +A N++Q+ + ++G IS PY +KT W
Sbjct: 179 RILCYRDCNASNEIQVGYVDDQGVHISDPYQIKTNW 214
>gi|340508751|gb|EGR34390.1| proteasome a-type and b-type family protein, putative
[Ichthyophthirius multifiliis]
Length = 251
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 122/209 (58%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P V G+SV+AL Y G+++ D SY S++++ +V+R++ + + + A+GE +DFQE+
Sbjct: 32 PTVVGSSVIALVYDQGVIIGTDTICSYYSSLKFTNVQRVEKLTDNCVYTATGEFADFQEV 91
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
+R E+ + DD S P++ Y++++ Y+ RNK +P++ V+GG G+ YL
Sbjct: 92 VRLTQEMTNQTFLNDDNISYTPQDYAHYISQLQYHYRNKMNPIYLWSVIGGFYQGKPYLA 151
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
V G E V+TGFG +L+ ++ + W+ + E ++++KC L YRD A +
Sbjct: 152 QVDPYGTYLERKQVSTGFGGYLSGALIDNNWNPQSNLEQAKQVIQKCFESLYYRDTKAHD 211
Query: 203 KLQIAKITEEGTTISQPYALKTFWGFTAF 231
+QI + ++G + +P+ +++ W + F
Sbjct: 212 VIQITIVDKDGIKMEKPHRIQSKWNYQGF 240
>gi|313231827|emb|CBY08939.1| unnamed protein product [Oikopleura dioica]
gi|313241521|emb|CBY33769.1| unnamed protein product [Oikopleura dioica]
Length = 239
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 123/217 (56%), Gaps = 5/217 (2%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
+P RT P VTG S++ + ++ G+L+A D G+YG R++ ++RI + + L+ +G
Sbjct: 13 EPSTRTLSPSVTGGSILGIMFEGGVLLAGDRLGAYGGLHRFRDIDRIIKVNDNVLITYTG 72
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+++DFQ + L++ ++M +DG LGP E + + R+MYNRR+K +PLWN +++ G
Sbjct: 73 DVADFQYIEEILEDEQRENDMRNDGYELGPSEYFNLMGRIMYNRRSKGNPLWNRIIVAGY 132
Query: 135 KNG--QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE---NLSYEDGVKLLEKC 189
+ ++G + G FE + TGFG L P++ E + + E ++LE+
Sbjct: 133 DKAADKPFMGQIDSKGTVFESHLIGTGFGGFLVHPLMERELEKIDGRPTKEQATQILERA 192
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
++VL YRD++ NK I + G++I L T W
Sbjct: 193 LKVLYYRDKTTYNKWSIGTTEKSGSSIEASRELATNW 229
>gi|449329171|gb|AGE95445.1| 26S proteasome beta-type subunit [Encephalitozoon cuniculi]
Length = 235
Score = 140 bits (352), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 82/216 (37%), Positives = 123/216 (56%), Gaps = 18/216 (8%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
+VTGT+VV+ +Y+DG++M AD GSYG + V+RI +G +LLG SGEISD Q L+
Sbjct: 13 FVTGTTVVSFRYRDGVIMGADTRGSYGRLAKLSGVQRIFKVGDQTLLGMSGEISDMQYLV 72
Query: 84 RNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG------ 137
+ L L DN D PK H + R++Y+ R+K PL S+ +GG+
Sbjct: 73 KTLTILTQEDNRRID-----PKGYHKMIQRILYSARSKISPLNLSVCVGGLNAASDGDRR 127
Query: 138 ----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH---ENLSYEDGVKLLEKCM 190
+K LG V+ +G + V TG G +L P LR E ++ E+ + L+E+ M
Sbjct: 128 THTREKMLGCVNHLGNFYFSDVVCTGIGGYLVLPFLRSRVEGREEEIAREEAIGLVEEAM 187
Query: 191 RVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
R+L YRD +A N++Q+ + ++G IS PY +KT W
Sbjct: 188 RILCYRDCNASNEIQVGYVDDQGVHISDPYQIKTNW 223
>gi|341901884|gb|EGT57819.1| hypothetical protein CAEBREN_03269 [Caenorhabditis brenneri]
Length = 236
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 117/210 (55%), Gaps = 13/210 (6%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
+ +D +QRT P TGTSV+AL+YK G+++ D SYG RYK+V R + + L+
Sbjct: 1 MNAHDEVQRTLNPTCTGTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDNVLI 60
Query: 71 GASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
G+ +DF L ++ +L +D +GPK LH YLT ++Y RR K +P+WN+LV
Sbjct: 61 AFGGDHADFHWLQNVIERQVLLWKRFD--QDIGPKALHGYLTSLLYARRCKMNPIWNTLV 118
Query: 131 LGGV--------KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH---ENLSY 179
+ GV + ++G+++ G ++ H+ATG G L + DEW ENLS
Sbjct: 119 VAGVEEEEKNNKETSTPFIGVITQKGCAYQVKHIATGLGAFLLNQAVEDEWRKKGENLSR 178
Query: 180 EDGVKLLEKCMRVLLYRDRSAVNKLQIAKI 209
ED +L K + + LY D A N+ +I ++
Sbjct: 179 EDAEAVLRKSLELTLYHDCVADNEFEIGRV 208
>gi|341882011|gb|EGT37946.1| hypothetical protein CAEBREN_26131 [Caenorhabditis brenneri]
Length = 236
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/210 (35%), Positives = 117/210 (55%), Gaps = 13/210 (6%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
+ +D +QRT P TGTSV+AL+YK G+++ D SYG RYK+V R + + L+
Sbjct: 1 MNAHDEVQRTLNPTCTGTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDNVLI 60
Query: 71 GASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
G+ +DF L ++ +L +D +GPK LH YLT ++Y RR K +P+WN+LV
Sbjct: 61 AFGGDHADFHWLQNVIERQVLLWKRFD--QDIGPKALHGYLTSLLYARRCKMNPIWNTLV 118
Query: 131 LGGV--------KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH---ENLSY 179
+ GV + ++G+++ G ++ H+ATG G L + DEW ENLS
Sbjct: 119 VAGVEEEEKNNKETSTPFIGVITQKGCAYQVKHIATGLGAFLLNQAVEDEWRKKGENLSR 178
Query: 180 EDGVKLLEKCMRVLLYRDRSAVNKLQIAKI 209
ED +L K + + LY D A N+ +I ++
Sbjct: 179 EDAEAVLRKSLELTLYHDCVADNEFEIGRV 208
>gi|159113236|ref|XP_001706845.1| Proteasome subunit beta type 4 precursor [Giardia lamblia ATCC
50803]
gi|157434945|gb|EDO79171.1| Proteasome subunit beta type 4 precursor [Giardia lamblia ATCC
50803]
Length = 217
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 122/216 (56%), Gaps = 12/216 (5%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
++TG +VVA+ +KDG+LMAAD +YGST R + ERI P+G H+L+G +G+ +DF+
Sbjct: 4 FLTGGTVVAVAHKDGVLMAADTVLNYGSTRRTDNYERIIPVGTHTLIGFTGDEADFK--- 60
Query: 84 RNLDELILYDNMWDDGNSLG-----PKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ 138
D L +M + G +E+H +L Y+ R + DP++N ++GG + G+
Sbjct: 61 ---DSLYTLKSMHREARCHGTPPPSTREIHGFLATRNYSSRLEMDPIYNGYIIGGCEPGE 117
Query: 139 K-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
Y+G+V + G F S ATG G H A P+LR+ W +S ++ V LL + ++ L + D
Sbjct: 118 SPYIGVVDLRGTQFTASFFATGMGRHYALPVLREGWKPGISKDEAVALLLESLKTLAFND 177
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQN 233
+A + I + T +GT I L W A+++
Sbjct: 178 AAAGSSFIICEATSDGTHIGPVQTLDLDWSSAAYKD 213
>gi|308159163|gb|EFO61707.1| Proteasome subunit beta type 4 precursor [Giardia lamblia P15]
Length = 217
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/216 (35%), Positives = 122/216 (56%), Gaps = 12/216 (5%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
++ G +VVA+ +KDG+LMAAD +YGST R S ER+ PIG H+L+G +G+ +DF++ +
Sbjct: 4 FLAGGTVVAVTHKDGVLMAADTVLNYGSTRRTDSYERVIPIGTHTLIGFTGDEADFKDSV 63
Query: 84 RNLDELILYDNMWDDGNSLG-----PKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ 138
L +M + G KE+H +L Y+ R + DP++N ++GG + G+
Sbjct: 64 YTLK------SMHREARCHGVPPPSTKEIHGFLATRNYSSRLEMDPIYNGYIVGGCEPGE 117
Query: 139 K-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
Y+G+V M G F S ATG G H A P+LR+ W +S ++ V LL + ++ L + D
Sbjct: 118 SPYIGVVDMRGTQFTASFFATGMGRHYALPVLREGWKPGISKDEAVALLLESLKTLAFND 177
Query: 198 RSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQN 233
+A + I + T +GT I L W A+++
Sbjct: 178 AAAGSSFIICEATNDGTHIGPIQTLDLDWSSAAYKD 213
>gi|156083775|ref|XP_001609371.1| proteasome subunit beta type 4 [Babesia bovis T2Bo]
gi|154796622|gb|EDO05803.1| proteasome subunit beta type 4 [Babesia bovis]
Length = 226
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/193 (35%), Positives = 110/193 (56%), Gaps = 4/193 (2%)
Query: 48 SYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELI---LYDNMWDDGNS-LG 103
SYG R +V+RI+ + K ++ SG+++D Q + + L + + DN D + LG
Sbjct: 25 SYGRQNRTNNVQRIEKLAKDTIFCTSGDVADHQYITQLLQATVRREMLDNNNDHASCHLG 84
Query: 104 PKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNH 163
P+ LH+YL RV Y RR+K +PLWNS ++ GV +LG M G ++D V TG G +
Sbjct: 85 PEALHNYLGRVFYARRSKMNPLWNSAIVAGVSQNGPFLGYADMYGTQYKDDFVVTGMGKY 144
Query: 164 LARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALK 223
A LR++ + N++ + L CMR+L RD SA +++QIA +T +G + +P ++
Sbjct: 145 FAIGPLREKHNPNMTKDAARALAIDCMRLLYLRDCSAGDRIQIAYVTAQGIELEEPMQIQ 204
Query: 224 TFWGFTAFQNPTA 236
WG+ F PT
Sbjct: 205 AEWGYEKFLAPTC 217
>gi|308500215|ref|XP_003112293.1| CRE-PBS-7 protein [Caenorhabditis remanei]
gi|308268774|gb|EFP12727.1| CRE-PBS-7 protein [Caenorhabditis remanei]
Length = 236
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 116/208 (55%), Gaps = 13/208 (6%)
Query: 13 PNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGA 72
+D +QRT P TGTSV+AL+YK G+++ D SYG RYK+V R + + L+
Sbjct: 3 AHDELQRTLNPTCTGTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDNVLIAF 62
Query: 73 SGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
G+ +DF L ++ +L +D +GPK LH YLT ++Y RR K +P+WN+LV+
Sbjct: 63 GGDHADFHWLQNVIERQVLLWKRFD--QDIGPKALHGYLTSLLYGRRCKMNPIWNTLVVA 120
Query: 133 GV--------KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH---ENLSYED 181
GV + ++G+++ G ++ H+ATG G L + DEW E+LS ED
Sbjct: 121 GVEEEEKNNKETSTPFIGVITQKGCAYQVKHIATGLGAFLLNQAVEDEWRKKGEDLSRED 180
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKI 209
+L K + + +Y D A N+ +I ++
Sbjct: 181 AEAVLRKSLELTIYHDCVADNEFEIGRV 208
>gi|194376656|dbj|BAG57474.1| unnamed protein product [Homo sapiens]
Length = 167
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/126 (46%), Positives = 96/126 (76%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 42 PITRTQNPMVTGTSVLGVKFEGGMVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASGD 101
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L + L ++++ + + DG+S P+ +HS+LTR MY+RR+K +PLWN++V+GG
Sbjct: 102 YADFQYLKQVLGQMVIDEELLGDGHSYSPRAIHSWLTRAMYSRRSKMNPLWNTMVIGGYA 161
Query: 136 NGQKYL 141
+G++++
Sbjct: 162 DGERFI 167
>gi|17508501|ref|NP_492354.1| Protein PBS-7 [Caenorhabditis elegans]
gi|3892154|emb|CAB03081.1| Protein PBS-7 [Caenorhabditis elegans]
Length = 236
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 75/228 (32%), Positives = 122/228 (53%), Gaps = 14/228 (6%)
Query: 13 PNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGA 72
+D +QRT P TGTSV+AL+YK G+++ D SYG RYK+V R + + L+
Sbjct: 3 AHDEVQRTLNPTCTGTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNDNVLIAF 62
Query: 73 SGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
G+ +DF L ++ +L +D +GPK LH YLT ++Y +R K +P+WN+LV+
Sbjct: 63 GGDHADFHWLQNVIERQVLLWKRFD--QDIGPKALHGYLTSLLYAKRCKMNPVWNTLVVA 120
Query: 133 GV--------KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH---ENLSYED 181
GV + ++G+++ G ++ H+ATG G L + DEW E+LS E+
Sbjct: 121 GVEEEEKNNKETSTPFIGVITQKGCAYQVKHIATGLGAFLLNQAVEDEWRKKGEDLSREE 180
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKI-TEEGTTISQPYALKTFWGF 228
+L K + + LY D A N+ +I ++ EG + + + W
Sbjct: 181 AEAVLRKSLELTLYHDCVADNEFEIGRVDATEGVVLGKEEKIIGDWSI 228
>gi|253748642|gb|EET02673.1| Proteasome subunit beta type 4 precursor [Giardia intestinalis ATCC
50581]
Length = 217
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 122/211 (57%), Gaps = 2/211 (0%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
++TG +VVA+ +KDG+LMAAD +YGST R + +RI PIG H+L+G +G+ +DF++ +
Sbjct: 4 FLTGGTVVAVVHKDGVLMAADTVLNYGSTRRTEXYKRIVPIGVHTLIGFTGDEADFKDSI 63
Query: 84 RNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ-KYLG 142
L E + + + KE+H +L Y+ R + DP++N ++GG + G Y+G
Sbjct: 64 YTL-ESMHREARCHGMHPPSTKEIHGFLATRNYSSRLEMDPIYNGYIVGGYEPGDGPYIG 122
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+V + G F S ATG G H A P+LR+ W +++S ++ V LL + ++ L D +A +
Sbjct: 123 VVDIRGTQFTASFFATGMGRHYAMPVLREGWRQDISRDEAVALLLESLKTLALNDAAAGS 182
Query: 203 KLQIAKITEEGTTISQPYALKTFWGFTAFQN 233
I + T +GT I L W +++
Sbjct: 183 SFMICEATNDGTHIGPFQTLDLDWSSATYKD 213
>gi|194765170|ref|XP_001964700.1| GF23325 [Drosophila ananassae]
gi|190614972|gb|EDV30496.1| GF23325 [Drosophila ananassae]
Length = 265
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 120/209 (57%), Gaps = 3/209 (1%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
TG+SV+ +++ G++MAAD SYGS RY+++ERI I + L G G+ +D Q ++R
Sbjct: 52 TTGSSVIGIRFDKGVMMAADTLVSYGSLARYQNMERIFMINNNILFGGCGDFADIQSIIR 111
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK-NGQKYLGM 143
+++ I+ D D + PK L ++TRV+Y+RR + +PL +VLGG+ G+ YL
Sbjct: 112 GIEQKIVEDQCNGDDIEMKPKALGQWMTRVLYDRRTQMNPLLVDVVLGGLDVQGKPYLAN 171
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSY--EDGVKLLEKCMRVLLYRDRSAV 201
V + G + +D +ATGF HL P +R ++ + ++ +++++ M++L YRD
Sbjct: 172 VDLRGRSHDDFVIATGFARHLTIPFIRSAKPKDRDFNMDEAHEMIKRSMQILYYRDTRNN 231
Query: 202 NKLQIAKITEEGTTISQPYALKTFWGFTA 230
++ + + + I PY + W + A
Sbjct: 232 SQYTLGVCSPKNCGIEGPYQVAENWSYAA 260
>gi|209732934|gb|ACI67336.1| Proteasome subunit beta type-4 precursor [Salmo salar]
gi|303662096|gb|ADM16064.1| Proteasome subunit beta type-4 precursor [Salmo salar]
Length = 222
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 122/213 (57%), Gaps = 36/213 (16%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI+ T P VTGTSV+ +K+ G+++AADM GSYGS R++++ R+ + ++LGASG+
Sbjct: 34 PIKHTLNPMVTGTSVLGVKFTGGVIIAADMLGSYGSLARFRNISRLMKVNDSTILGASGD 93
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+D+Q + + ++++++ + L++GG
Sbjct: 94 YADYQYMKQIIEQMVIDEE----------------------------------LLIGGFY 119
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYEDGVKLLEKCMRVL 193
N + +LG V +GV +E VATGFG +LA+P++R+ E ++ ++ L+E+C++VL
Sbjct: 120 NDESFLGYVDKLGVAYEAPTVATGFGAYLAQPLMREVVENKVEITKDEARALIERCLKVL 179
Query: 194 LYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
YRD + N+ +IA +T+EG I P + +T W
Sbjct: 180 YYRDARSYNRHEIAIVTKEGVGIVGPMSCETNW 212
>gi|195017517|ref|XP_001984612.1| GH16568 [Drosophila grimshawi]
gi|193898094|gb|EDV96960.1| GH16568 [Drosophila grimshawi]
Length = 213
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 117/206 (56%), Gaps = 5/206 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TG+SV+ ++Y G+L+AAD +YGS RY++V+RI I LLG SG+ +D Q ++R+
Sbjct: 3 TGSSVLGIRYNAGVLIAADTLITYGSMARYQNVDRIFKINNRILLGGSGDFADVQCIMRS 62
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMV 144
+D+ I+ D + S P L +++TRV+YNRR +PL +++ G+ + G YL V
Sbjct: 63 IDQKIIEDQYQN--CSTKPNSLATWMTRVLYNRRLCENPLNIDVIIAGIDECGLPYLANV 120
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDE--WHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
M G +ED +AT F N P++ + + ++ + + L+ CM+ L YRD ++
Sbjct: 121 DMRGGIYEDYVLATCFANQYCVPLVCESKPRDRDFTFAEAIDLIRSCMQALYYRDTHSIP 180
Query: 203 KLQIAKITEEGTTISQPYALKTFWGF 228
+ +G I+ P+ ++ W F
Sbjct: 181 LYTVGDCNADGCRINGPFKVEENWSF 206
>gi|324516623|gb|ADY46583.1| Proteasome subunit beta type-4 [Ascaris suum]
Length = 229
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 120/222 (54%), Gaps = 7/222 (3%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
I+RT P TGTSVVA+ + G+ + D SYG RYK V R + + ++ G+
Sbjct: 3 IERTLNPTCTGTSVVAIAFDGGVAIMTDRVVSYGKMARYKHVSRQYRVNDNVVVAFGGDH 62
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+DFQ L ++ +D+ L P+ LH+YLT ++Y RR + +P+WN+L++GG++
Sbjct: 63 ADFQWLQNVIERQRCMLRAYDENADLSPRMLHAYLTSLLYYRRTRMNPIWNTLIVGGLQK 122
Query: 137 G----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE---NLSYEDGVKLLEKC 189
+ ++G+++ GV + VATG G L + E+ + LS ++ LL KC
Sbjct: 123 ENDEMKPFIGVITQRGVAYRAQSVATGMGAMLLNQAVETEFRKVGGRLSKDEAKALLRKC 182
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAF 231
+ + +Y D A N+ +I+ + ++G T+ +P + W +
Sbjct: 183 LELTVYHDCVADNEFEISTVDKDGVTLGKPEFITGNWDIAEY 224
>gi|195401414|ref|XP_002059308.1| GJ18283 [Drosophila virilis]
gi|194142314|gb|EDW58720.1| GJ18283 [Drosophila virilis]
Length = 1176
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 109/178 (61%), Gaps = 3/178 (1%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G+SV+ +++ GIL++AD +YG+ RY++V+R+ I LLG G+ +D Q ++R +
Sbjct: 70 GSSVLGIRFDGGILVSADTLVTYGNLARYQNVDRVIKISDSVLLGGGGDFADIQSIVRTI 129
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK-YLGMVS 145
D+ I+ D+ DDG S+ P L ++LTR++Y RR+ PL +++ G+++G + YL V
Sbjct: 130 DQKIINDHCRDDGASMKPMALVNWLTRLLYGRRSLKQPLKAEIIVAGIEDGCRPYLSAVD 189
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDE--WHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
G FE+ A+GF +A P++R+ + S ++ L+ CMR+L YRD ++
Sbjct: 190 ARGSPFENYVAASGFARLIAVPLVRERKPIDRDFSLKEASTLIRDCMRILYYRDTRSI 247
>gi|312086301|ref|XP_003145022.1| proteasome A-type and B-type family protein [Loa loa]
gi|307759814|gb|EFO19048.1| proteasome A-type and B-type family protein [Loa loa]
Length = 238
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 115/222 (51%), Gaps = 7/222 (3%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
++ T P TGTSV AL Y G+ + +D SYG RY+ + R + H ++ G+
Sbjct: 12 VEATMNPTCTGTSVCALAYDGGVAVMSDRLVSYGKMARYRHITRQYRVNNHVIITFGGDH 71
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--V 134
+DFQ L ++ D L PK LH +LT ++Y RR + +PLWN+LV+ G V
Sbjct: 72 ADFQWLQNVIERQTCELKSHDPDADLSPKMLHGFLTSLLYYRRTRMNPLWNTLVVAGLQV 131
Query: 135 KNGQ--KYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN---LSYEDGVKLLEKC 189
+N Q ++G+++ GV + VATG G L ++ E+ +N LS E V +L K
Sbjct: 132 QNDQLEPFIGVITSRGVAYRTKSVATGMGAMLLNQVIETEYRKNDGKLSKEQAVDILRKS 191
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAF 231
+ + +Y D A N+ +I+ + ++G + P + W +
Sbjct: 192 LELSIYHDCVADNEFEISTVDKDGVQLGMPEFIAGNWDIAEY 233
>gi|392350312|ref|XP_003750624.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-4-like
[Rattus norvegicus]
Length = 390
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 123/212 (58%), Gaps = 15/212 (7%)
Query: 7 KQGLVGPNDP-----IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERI 61
+ GL+ P+ RTQ P VTGTS++ + +AADM GSYGS + ++ I
Sbjct: 163 RSGLMDPSPSACEGSFTRTQXPMVTGTSILGI-------IAADMLGSYGSLSGFHNISHI 215
Query: 62 KPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNK 121
++ GASG+ + + L + L ++++ + + DG++ P+ +HS+LTR +Y R+K
Sbjct: 216 XQTNTCTM-GASGDSTVVRYLNQVLSQMVIDEKLLGDGHNYSPRGIHSWLTRAIYTHRSK 274
Query: 122 FDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSY 179
+PLWN++ GG G+ +LG +M+ V +E +A +G +LA+P+L + E LS
Sbjct: 275 MNPLWNTMDTGGYAYGESFLGYGNMLAVAYEAPSLAAVYGAYLAQPLLGEVLEEQPVLSR 334
Query: 180 EDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
+ +L+E+ +RVL Y+ + ++ QI +TE
Sbjct: 335 TEARELVERXIRVLHYQGARSCSRFQIITVTE 366
>gi|392342172|ref|XP_003754524.1| PREDICTED: LOW QUALITY PROTEIN: proteasome subunit beta type-4-like
[Rattus norvegicus]
Length = 313
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 122/212 (57%), Gaps = 15/212 (7%)
Query: 7 KQGLVGPNDP-----IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERI 61
+ GL+ P+ RTQ P VTGTS++ + +AADM GSYGS + ++ I
Sbjct: 86 RSGLMDPSPSACEGSFTRTQXPMVTGTSILGI-------IAADMLGSYGSLSGFHNISHI 138
Query: 62 KPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNK 121
+GASG+ + + L + L ++++ + + DG++ P+ +HS+LTR +Y R+K
Sbjct: 139 XQTNT-CTMGASGDSTVVRYLNQVLSQMVIDEKLLGDGHNYSPRGIHSWLTRAIYTHRSK 197
Query: 122 FDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSY 179
+PLWN++ GG G+ +LG +M+ V +E +A +G +LA+P+L + E LS
Sbjct: 198 MNPLWNTMDTGGYAYGESFLGYGNMLAVAYEAPSLAAVYGAYLAQPLLGEVLEEQPVLSR 257
Query: 180 EDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
+ +L+E+ +RVL Y+ + ++ QI +TE
Sbjct: 258 TEARELVERXIRVLHYQGARSCSRFQIITVTE 289
>gi|3914421|sp|Q29384.1|PSB4_PIG RecName: Full=Proteasome subunit beta type-4; AltName:
Full=Macropain beta chain; AltName: Full=Multicatalytic
endopeptidase complex beta chain; AltName:
Full=Proteasome beta chain; AltName: Full=Proteasome
chain 3; Flags: Precursor
Length = 154
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 83/114 (72%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG
Sbjct: 41 SPITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNNSTMLGASG 100
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNS 128
+ +DFQ L + L ++++ + + DG+S PK +HS+LTR MYNRR K +PLW +
Sbjct: 101 DYADFQYLKQVLGQMVIDEELLGDGHSYSPKAIHSWLTRAMYNRRFKMNPLWTT 154
>gi|399216126|emb|CCF72814.1| unnamed protein product [Babesia microti strain RI]
Length = 253
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 27/239 (11%)
Query: 24 YVTGTSVVALKYKDGILMAADMGG-------SYGSTIRYKSVERIKPIGKHSLLGASGEI 76
YV +S + +K+ GIL+AAD G GS+I++ +V+R+ +G ++ SGE
Sbjct: 5 YVNCSSAIGIKFNGGILIAADTQGIDLIYIACSGSSIKFPNVQRVDKVGNAAIFACSGEY 64
Query: 77 SDFQELLRNLDELI--LYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV 134
+D Q + + L++L + L P +LHSYLT V+Y RR++ +PL S ++GG
Sbjct: 65 ADCQWVSKELNKLFQEFKLEVAQCQAKLTPVKLHSYLTNVLYKRRSQMNPLLLSTIIGGK 124
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATG------------------FGNHLARPILRDEWHEN 176
+ YLG + G + + +ATG G + A ILR N
Sbjct: 125 EGNDWYLGYSDLFGTAYTEDFMATGMSTILYNINYVYVIIYRCMGRYFAIGILRQYHSPN 184
Query: 177 LSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPT 235
++ +L KC+++L RD A N +QI T+ G IS+P ++T W F PT
Sbjct: 185 MNAAQAKELAIKCLQILYLRDCGAGNNIQIGVFTDCGIEISEPIFIETQWSHNDFYKPT 243
>gi|402468579|gb|EJW03717.1| hypothetical protein EDEG_01988 [Edhazardia aedis USNM 41457]
Length = 230
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 28/225 (12%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
V +V++ KY G+L A DM G+YG ++ +++R + +++ +GE SD L +
Sbjct: 5 VLTPTVISFKYAGGVLTATDMHGTYGGLSKFTNLQRTFKLSSSTIISYTGEYSDIMFLHK 64
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPL-WNSLVLG----------- 132
L IL DN+ + P E+H L RV+Y +R+ ++P+ N VLG
Sbjct: 65 ALRYEILKDNI-----EISPIEIHRLLQRVIYGKRSDYEPINVNVNVLGKSDSNEDESLF 119
Query: 133 --------GVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH---ENLSYED 181
K+ +LG V+ G F + + TGFG +L P LR++ EN+S +
Sbjct: 120 SPVIVYPENYKDNGFFLGSVNEKGNFFFNDVICTGFGAYLVTPFLREKVEGKWENISRDQ 179
Query: 182 GVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
VK+ E MR+L+YRD A+NK+QI + +SQPY L T W
Sbjct: 180 AVKIAEDAMRILIYRDCFALNKIQIGIVESNFCDVSQPYVLNTEW 224
>gi|170592761|ref|XP_001901133.1| Proteasome A-type and B-type family protein [Brugia malayi]
gi|158591200|gb|EDP29813.1| Proteasome A-type and B-type family protein [Brugia malayi]
Length = 238
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 118/223 (52%), Gaps = 9/223 (4%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
++ T P TGTSV AL Y DG+ + D SYG T +Y+ + R + ++ G+
Sbjct: 12 VEATVNPTCTGTSVCALAYDDGVAVMTDRLVSYGKTAQYRHITRQYRVNNRVIIAFGGDH 71
Query: 77 SDFQELLRNLDELILYDNMWDDGNS-LGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+DFQ L+N+ E Y+ D N+ L PK LH +LT ++Y RR + +PLWN+LV+ G++
Sbjct: 72 ADFQ-WLQNVIERQTYELKSHDPNADLSPKMLHGFLTSLLYYRRTRMNPLWNTLVVAGLQ 130
Query: 136 NG----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN---LSYEDGVKLLEK 188
+ ++G+++ GV + ATG G L ++ E +N LS E + +L K
Sbjct: 131 TQNDQLEPFIGVITSRGVAYRTKSXATGMGAMLLNQVIETEQRKNDGKLSKEQAIDILRK 190
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAF 231
+ + +Y D A N+ +I+ + ++G + P + W +
Sbjct: 191 SLELSIYHDCVADNEFEISTVDKDGVQLGVPEFIAGNWDIAEY 233
>gi|146099910|ref|XP_001468785.1| hypothetical protein, conserved, partial [Leishmania infantum
JPCM5]
gi|134073153|emb|CAM71874.1| hypothetical protein, conserved, partial [Leishmania infantum
JPCM5]
Length = 169
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 56/146 (38%), Positives = 91/146 (62%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+G SV+A+KY G+LMAAD SYGS ++ ++ RIK +G HS + A+G +DFQ + +
Sbjct: 2 ASGGSVIAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGSHSAVCATGSYADFQMMTK 61
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+++ I M+ + + L P E+ SYL R +Y +R F+P +V G ++ + +L V
Sbjct: 62 QVEDNIERQRMYHNVDELSPSEVFSYLHRSIYQKRCDFEPCLCQMVFIGFRDSETFLAGV 121
Query: 145 SMIGVNFEDSHVATGFGNHLARPILR 170
+G +ED VATG+G ++A P+LR
Sbjct: 122 DDVGTRWEDDCVATGYGAYIALPLLR 147
>gi|402588931|gb|EJW82864.1| proteasome A-type and B-type family protein [Wuchereria bancrofti]
Length = 238
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 113/222 (50%), Gaps = 7/222 (3%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
++ T P TGTSV AL Y G+ + +D SYG T +Y+ + R + ++ G+
Sbjct: 12 VEATVNPTCTGTSVCALAYDGGVAVMSDRLVSYGKTAQYRHITRQYRVNNRVIIAFGGDH 71
Query: 77 SDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+DFQ L ++ D L PK LH +LT ++Y RR + +PLWN+LV+ G++
Sbjct: 72 ADFQWLQNVIERQTCELKSHDPNADLSPKMLHGFLTSLLYYRRTRMNPLWNTLVVAGLQT 131
Query: 137 G----QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN---LSYEDGVKLLEKC 189
+ ++G+++ GV + VATG G L ++ E +N LS E + +L K
Sbjct: 132 QNDHLEPFIGVITSRGVAYRTRSVATGMGAMLLNQVIETEQRKNDGKLSKEQAIDILRKS 191
Query: 190 MRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAF 231
+ + +Y D A N+ +I+ + ++G + P + W +
Sbjct: 192 LELSIYHDCVADNEFEISTVDKDGVQLGVPEFIAGNWDIAEY 233
>gi|241242109|ref|XP_002401910.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
gi|215496245|gb|EEC05885.1| 20S proteasome, regulatory subunit beta, putative [Ixodes
scapularis]
Length = 154
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 84/120 (70%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
QRT P VT TSV+ +K+ G+++AAD+ G YGS + ++ R+ + ++GA G+ +
Sbjct: 33 QRTLHPMVTTTSVLGVKFDGGVMLAADLAGYYGSLAKLRNCPRLLKVNDQIIVGAGGDYA 92
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
D+Q L +D+ ++ + +DG L PK L+S+LTRVMYNRR+KFDPLWN+ ++GG+++G
Sbjct: 93 DYQFLKGVMDQKVISEECLNDGFKLKPKSLYSWLTRVMYNRRSKFDPLWNTYLVGGLQDG 152
>gi|195432344|ref|XP_002064183.1| GK19842 [Drosophila willistoni]
gi|194160268|gb|EDW75169.1| GK19842 [Drosophila willistoni]
Length = 250
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 115/204 (56%), Gaps = 4/204 (1%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G S + +++ GI+ A++ +Y S +RY + +RI I ++ LL SG+ D Q L R +
Sbjct: 40 GPSFLGIRFDKGIIFASNTLVAYYSMLRYPNAQRIFKISENILLTGSGDFPDIQSLKRLI 99
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMVS 145
D ++ + + D + P+ + ++LTR++Y RR + DP + ++ +GG+ ++ +L V
Sbjct: 100 DSKMIVEECYKD-RKVSPRAVATWLTRILYYRRCQMDPYFVAMGVGGLDEDNTPFLASVD 158
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDE--WHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
G +ED VA+GF H+A P++R+ ++ +L+ + +L+ M V+ YRD A++
Sbjct: 159 KRGCCYEDYVVASGFVLHMAMPMVRERKPYYRDLTAREAAELVRTSMEVVFYRDCYAIDT 218
Query: 204 LQIAKITEEGTTISQPYALKTFWG 227
+ T++ I P+ + WG
Sbjct: 219 YAVGICTDDYCGIQGPFRVAEKWG 242
>gi|123449195|ref|XP_001313319.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
gi|121895198|gb|EAY00390.1| Family T1, proteasome beta subunit, threonine peptidase
[Trichomonas vaginalis G3]
Length = 214
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 105/199 (52%), Gaps = 3/199 (1%)
Query: 29 SVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDE 88
++VA KY GIL+A+D+ +YGS R+ +V + + ++GASGE +DFQ L+ +
Sbjct: 9 AIVAAKYDGGILLASDLSITYGSMFRHNNVSHFVEVAPNIIIGASGEFADFQTLIEVIKS 68
Query: 89 LILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK-NGQKYLGMVSMI 147
+IL +G L E+H+Y+ R MY R+ PL +++ G+ +G K+L
Sbjct: 69 VILQQQCKHNGEYLTASEVHNYIKRYMYQCRSNMKPLSCKVIVAGINPDGSKFLACTDPY 128
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G ++E H+ TGFG +L + D N S++D K + + R + R+ +A K++
Sbjct: 129 GASWESDHIGTGFGKYLQGLQIADV--VNGSFDDVKKGITEVFRAVNARNTTANGKIEFI 186
Query: 208 KITEEGTTISQPYALKTFW 226
+T +G P + W
Sbjct: 187 TVTPQGINHLAPEQIDPNW 205
>gi|302660913|ref|XP_003022130.1| hypothetical protein TRV_03733 [Trichophyton verrucosum HKI 0517]
gi|291186061|gb|EFE41512.1| hypothetical protein TRV_03733 [Trichophyton verrucosum HKI 0517]
Length = 170
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 96/158 (60%), Gaps = 8/158 (5%)
Query: 80 QELLRNLDELILYDNMWDDG-NSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN-G 137
Q + R L+ L + +N G +SL K LH+YL++++Y RR+KFDPLWN +++ G+ + G
Sbjct: 2 QYIDRVLNSLDIQENYSTYGEHSLNAKNLHTYLSKLLYQRRSKFDPLWNHILVAGLDDEG 61
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHE-----NLSYEDGVKLLEKCMRV 192
+ +L ++G + +ATGFG HLA PILR + E N++ E V +++CMRV
Sbjct: 62 KPFLSSADLLGTTYSAPALATGFGAHLAVPILRRLFPEENGIDNITKEQAVDAMKQCMRV 121
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKT-FWGFT 229
L YRD + ++ IA +T+EG + + AL+ W F
Sbjct: 122 LFYRDARSSDRYSIAVVTKEGVELKENEALENQSWAFA 159
>gi|67591750|ref|XP_665592.1| beta tubulin [Cryptosporidium hominis TU502]
gi|54656351|gb|EAL35361.1| beta tubulin [Cryptosporidium hominis]
Length = 279
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
Query: 65 GKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDP 124
GK S++ ++GE SDFQ ++ ++E D + +GN KE Y++ V Y RRNK DP
Sbjct: 101 GKLSVIVSTGEFSDFQNIIERVEEKAAED--FFEGNFKSAKEYSGYISAVHYQRRNKMDP 158
Query: 125 LWNSLVLGGV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGV 183
L N +++ G+ K+G K + V +G F++ +A+G +LA +LRD++ ++S+++
Sbjct: 159 LLNDIIVAGLRKDGSKEIYSVDPLGTRFDEDFIASGMAEYLAITLLRDKYKPDMSFDEAK 218
Query: 184 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAF 231
+LE CM+ Y + +QIA I ++GT I Y L W F
Sbjct: 219 LILEDCMKNSFYIECKGARMVQIATINQDGTRIYPKYPLDVTWRHDLF 266
>gi|66358144|ref|XP_626250.1| proteasome subunit beta7; NTN hydrolase fold [Cryptosporidium
parvum Iowa II]
gi|46227073|gb|EAK88023.1| proteasome subunit beta7; NTN hydrolase fold [Cryptosporidium
parvum Iowa II]
Length = 310
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 95/168 (56%), Gaps = 3/168 (1%)
Query: 65 GKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDP 124
GK S++ ++GE SDFQ ++ ++E D + +GN KE Y++ V Y RRNK DP
Sbjct: 132 GKLSVIVSTGEFSDFQNIIERVEEKAAED--FFEGNFKSAKEYSGYISAVHYQRRNKMDP 189
Query: 125 LWNSLVLGGV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGV 183
L N +++ G+ K+G K + V +G F++ +A+G +LA +LRD++ ++S+++
Sbjct: 190 LLNDIIVAGLRKDGSKEIYSVDPLGTRFDEDFIASGMAEYLAITLLRDKYKPDMSFDEAK 249
Query: 184 KLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAF 231
+LE CM+ Y + +QIA I ++GT I Y L W F
Sbjct: 250 LILEDCMKNSFYIECKGARMVQIATINQDGTRIYPKYPLDVTWRHDLF 297
>gi|429962380|gb|ELA41924.1| hypothetical protein VICG_01108 [Vittaforma corneae ATCC 50505]
Length = 224
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 111/214 (51%), Gaps = 18/214 (8%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
V G + + KYK+G++ A D G SYG + Y ++ + + ++ SG +SD Q L +
Sbjct: 5 VFGINAIGFKYKNGVIAAVDTGASYGMKVVY-GMQSVFKATDNCIIVFSGLLSDVQFLRK 63
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK--------- 135
+ + I D G L P+ +H + R++Y +R++ P+ S ++ G+
Sbjct: 64 FIKQEI----ESDVGRKLDPQGIHKMIQRILYQKRSEAAPMNVSAIVCGINQKKNEIFES 119
Query: 136 --NGQKYLGMVSMIG-VNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRV 192
N + LG+V+ G FEDS A F ++ PILR+ +NL ED +KL+E+C R+
Sbjct: 120 TDNKGRMLGVVNSKGNFWFEDS-AAVSFSSNFVLPILRERDLDNLEKEDAIKLMEECFRI 178
Query: 193 LLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
L Y+D + N +QI + E I Q Y + T W
Sbjct: 179 LCYKDCRSTNNIQIGIVEEGNMEILQSYNISTNW 212
>gi|268566085|ref|XP_002639630.1| C. briggsae CBR-PBS-7 protein [Caenorhabditis briggsae]
Length = 251
Score = 106 bits (265), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 110/221 (49%), Gaps = 24/221 (10%)
Query: 13 PNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGA 72
++ +QRT P TGTSV+AL+YK G+++ D SYG RYK+V R + ++ L+
Sbjct: 3 SHEEVQRTLNPTCTGTSVIALQYKTGVVVLTDRVVSYGKMARYKNVSRQYKVNENVLIAF 62
Query: 73 SGEISDFQELLR---------NLDELILYDNMWDDG----NSLGPKELHSYLTRVMYNRR 119
G+ +DF N IL D ++ G L + ++ RR
Sbjct: 63 GGDHADFHGFKMSSNAKYFSGNASIKILGRKHSTDTSLAFSTEGENFLAHAIVKIRIFRR 122
Query: 120 NKFDPLWNSLVLGGV--------KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD 171
K +P+WN+LV+ GV + ++G+++ G ++ H+ATG G +L + D
Sbjct: 123 CKMNPVWNTLVVAGVEEEEKNNKETSTPFIGVITQKGCAYQVKHIATGLGAYLLNQAVED 182
Query: 172 EWH---ENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKI 209
EW E+LS ED +L K + + LY D A N+ +I ++
Sbjct: 183 EWRKKGEDLSREDAEAVLRKSLELTLYHDCVADNEFEIGRV 223
>gi|209877507|ref|XP_002140195.1| proteasome subunit beta type 4 precursor [Cryptosporidium muris
RN66]
gi|209555801|gb|EEA05846.1| proteasome subunit beta type 4 precursor, putative [Cryptosporidium
muris RN66]
Length = 269
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 114/250 (45%), Gaps = 47/250 (18%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGK----------------------- 66
V+ +KY +G+++ A YGS+ + + R IG
Sbjct: 12 VIGIKYNEGVMLVASTLACYGSSKMFGGISRFHVIGAKSSDNKNGIDANMISNDDIALIE 71
Query: 67 -----------------HSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHS 109
++++ ++GE SDFQ L+ ++E L D + + GPKE +
Sbjct: 72 KISSVDLNDKVEFYPNAYTVISSTGEYSDFQYLIEQVEEKSLND--FYNNTLKGPKEYSN 129
Query: 110 YLTRVMYNRRNKFDPLWNSLVLGGVKNG-----QKYLGMVSMIGVNFEDSHVATGFGNHL 164
+++ + Y +RNK PL+N +V+ G++ + YL +V G F D +V +G +
Sbjct: 130 FISNLHYEKRNKMKPLYNQIVIAGLQKNISSEFESYLSIVDQFGTLFFDDYVGSGSSGYY 189
Query: 165 ARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKT 224
++R ++ +S + LLE+CMR + Y + + LQ IT +GTTI Y ++T
Sbjct: 190 GVSLIRQKYVPGISKDQAKSLLEECMRNIFYLECTGSRMLQFVTITLKGTTIYPAYPVET 249
Query: 225 FWGFTAFQNP 234
W + + P
Sbjct: 250 TWKYENYMKP 259
>gi|85719963|gb|ABC75550.1| proteasome subunit N3 [Ictalurus punctatus]
gi|87620392|gb|ABD38678.1| Proteasome subunit N3 [Ictalurus punctatus]
Length = 122
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Query: 117 NRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWH 174
NRR++ +PLWN++V+GG NG+ +LG V +GV +E VATGFG +LA+P++R+ E
Sbjct: 1 NRRSRMNPLWNTVVIGGFYNGESFLGYVDKLGVAYEAPAVATGFGAYLAQPLMREVLENK 60
Query: 175 ENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
+S ++ L+E+C++VL YRD + N+ +IA +TEEG I P + +T W
Sbjct: 61 VEVSKDEARALIERCLKVLYYRDARSYNRHEIAIVTEEGVEILGPLSSETNW 112
>gi|258564632|ref|XP_002583061.1| proteasome subunit beta type 4 [Uncinocarpus reesii 1704]
gi|237908568|gb|EEP82969.1| proteasome subunit beta type 4 [Uncinocarpus reesii 1704]
Length = 352
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 80/120 (66%), Gaps = 1/120 (0%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P RTQ P VTGTSV+A+K+ G+ +AAD SYGS R++ V+R++ S++G
Sbjct: 198 NGPQTRTQAPTVTGTSVLAVKFNGGVAIAADNLASYGSLARFQDVKRLRTFDNSSVVGFG 257
Query: 74 GEISDFQELLRNLDELILYDNMWDDG-NSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
G++SD Q + R L+ L + +N G ++L K LH+YL+++ Y RR+ F+PLWN ++LG
Sbjct: 258 GDVSDMQYIDRILNSLDIRENYSSYGQHTLNAKNLHTYLSKMFYKRRSDFNPLWNHILLG 317
>gi|429966111|gb|ELA48108.1| hypothetical protein VCUG_00346 [Vavraia culicis 'floridensis']
Length = 222
Score = 100 bits (248), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 110/218 (50%), Gaps = 22/218 (10%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+T +SVVA +Y DGI++++D +YGS + VE+ + ++++ A GE SDFQEL +
Sbjct: 5 LTSSSVVAFRYSDGIILSSDTSLNYGSFKMNRGVEKHYFLSNNTVMIARGEYSDFQELKK 64
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN-------- 136
DE + YD +G +E ++ R MY +R + +PL S+++ G
Sbjct: 65 ICDEEMEYD------EKMGTREWIRFIQRTMYYKRTRIEPLNLSIIVAGYDERNEKPAKE 118
Query: 137 -------GQKYL-GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEK 188
GQK + G + IG + D +A G +H+A P +R +L KL+++
Sbjct: 119 INSMEHFGQKLVFGAIDNIGNFYTDDVLACGIASHMALPYVRGHDAMSLDRAGATKLMKE 178
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
M+ L YRD A N ++I + +G ++ L W
Sbjct: 179 TMQTLYYRDCMADNHVKILGVERDGIWENEEIVLNGNW 216
>gi|387598181|gb|AFJ91746.1| proteasome subunit N3, partial [Ostrea edulis]
Length = 93
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 104 PKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNH 163
PK L S++TRV+YNRR+ F+PLWN+ V+GG+++G+ +LG + IG+ F D +A GFG +
Sbjct: 2 PKSLFSWMTRVLYNRRSNFNPLWNTFVVGGIQDGEPFLGYIDKIGIAFNDPTIACGFGAY 61
Query: 164 LARPILRDEWHEN--LSYEDGVKLLEKCMRVL 193
+A P+LR+ + N +S + K +++C++VL
Sbjct: 62 IATPLLREAYEANPKMSLSEAEKKIDECLKVL 93
>gi|339252522|ref|XP_003371484.1| dihydrouridine synthase (Dus) superfamily [Trichinella spiralis]
gi|316968258|gb|EFV52559.1| dihydrouridine synthase (Dus) superfamily [Trichinella spiralis]
Length = 355
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TG SV+AL + G+++AAD SYG RYK V R+ + +++LG SG+ +D+Q L
Sbjct: 186 PVCTGASVIALMFDQGVVIAADTKLSYGRFSRYKGVSRLMRVNDNTILGVSGDYADYQYL 245
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK--Y 140
++ + N P +H++LT V+Y RR+K +PLWNS V+ GV G K Y
Sbjct: 246 QSIINGRQMGMNSSQMRGEFTPASMHTFLTSVLYARRSKLNPLWNSYVVCGVTEGTKTPY 305
Query: 141 LGMVSMIGVNFEDSHVATG 159
LG + GV D+ V TG
Sbjct: 306 LGTYEL-GVVTADNCVITG 323
>gi|195148721|ref|XP_002015316.1| GL19635 [Drosophila persimilis]
gi|194107269|gb|EDW29312.1| GL19635 [Drosophila persimilis]
Length = 246
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 105/216 (48%), Gaps = 6/216 (2%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
+DP +T G SV+ ++Y G+L+AAD +GST R+++V+R+ I + ++G
Sbjct: 25 DDPFGQT---VTAGGSVIGIRYDQGVLVAADNCVHFGSTPRFQNVDRVFKINEQIVMGGG 81
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
G+ +D Q R +D ++ D ++ D + PK L + Y RR+ D ++V+GG
Sbjct: 82 GDFADIQMYKRTIDAQVVTDRIYQDTTEMKPKTLAGWFRSTTYTRRSSNDFSAVAVVVGG 141
Query: 134 VK-NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSY--EDGVKLLEKCM 190
++ YL + G+ ED T + P++RD ++ + E+ + ++ + M
Sbjct: 142 MEPQAGPYLAYIDSRGLIVEDYVATTDTAQQMVLPMVRDSKPKDREFTEEEALAMIRQGM 201
Query: 191 RVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
L RD A+ + G+ I PY + W
Sbjct: 202 ETLNNRDARAIPYYTVGVCNANGSHIEGPYNVSEDW 237
>gi|440493827|gb|ELQ76252.1| 20S proteasome, regulatory subunit beta type PSMB4/PRE4
[Trachipleistophora hominis]
Length = 222
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 112/218 (51%), Gaps = 22/218 (10%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+T +SVVA +Y +GI++++D +YGS + VE+ + ++++ GE S FQEL +
Sbjct: 5 LTSSSVVAFRYSNGIILSSDTSLNYGSLKMNRGVEKHYVLSNNTVMIVRGEYSCFQELKK 64
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN-------- 136
DE + YD S+G KE ++ RVMY +R + PL S+++ G
Sbjct: 65 ICDEEMEYDQ------SMGTKEWIRFVQRVMYYKRTRVMPLNLSVIVAGYDEHSEKQEKQ 118
Query: 137 -------GQKYL-GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEK 188
GQ + G++ +G + D +A G +H+A P +R +L E +KL+++
Sbjct: 119 INSVEHFGQGLIFGVIDNVGNFYTDDVLACGIASHMALPYIRGHGSTSLDREGAIKLMKE 178
Query: 189 CMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
M+ L YRD A N ++I + ++G ++ L W
Sbjct: 179 TMQTLYYRDCMADNHIKIVGVEKDGIWENEEMVLNGNW 216
>gi|198475053|ref|XP_002132830.1| GA26039 [Drosophila pseudoobscura pseudoobscura]
gi|198138657|gb|EDY70232.1| GA26039 [Drosophila pseudoobscura pseudoobscura]
Length = 246
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 3/203 (1%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G SV+ ++Y G+L+AAD +GST R+++V+R+ I + ++G G+ +D Q R +
Sbjct: 35 GGSVIGIRYDQGVLVAADNCVHFGSTPRFQNVDRVFKINEQIVMGGGGDFADIQMYKRTI 94
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK-NGQKYLGMVS 145
D ++ D ++ D + PK L + Y RR+ D ++V+GG++ YL +
Sbjct: 95 DAQVVTDRIYQDTTEMKPKTLAGWFRSTTYTRRSSNDFSAVAVVVGGMEPQAGPYLAYID 154
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSY--EDGVKLLEKCMRVLLYRDRSAVNK 203
G+ ED T + P++RD ++ + E+ + ++ + M L RD A+
Sbjct: 155 SRGLIVEDYVATTDTAQQMVLPMVRDSKPKDREFTEEEALAMIRQGMETLNNRDARAIPY 214
Query: 204 LQIAKITEEGTTISQPYALKTFW 226
+ G+ I PY + W
Sbjct: 215 YTVGVCNANGSHIEGPYNVSEDW 237
>gi|9653292|gb|AAB47113.2| proteasome beta-type subunit RN3 [Rattus sp.]
Length = 140
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 72/106 (67%)
Query: 10 LVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSL 69
+ P PI RTQ P VTGTSV+ +K G+++AADM GSYGS R +++ R + ++
Sbjct: 35 MSAPARPITRTQNPMVTGTSVLGVKSDCGVVIAADMLGSYGSLARLRNISRFMRLNDSTM 94
Query: 70 LGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVM 115
LGASG+ +DFQ L + L ++++ + ++ DG+S P+ +HS+LTR M
Sbjct: 95 LGASGDYADFQYLKQVLGQMVIDEELFGDGHSYSPRAIHSWLTRAM 140
>gi|357612754|gb|EHJ68152.1| hypothetical protein KGM_20431 [Danaus plexippus]
Length = 163
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 74/113 (65%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P T T+V+ LK+ G ++AAD GSYGS R++ R+ + LLG+ G+ +D+Q L
Sbjct: 18 PITTTTTVIGLKFDKGCVIAADTLGSYGSLARFRDCPRVLKVNDLILLGSGGDYADYQYL 77
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
+++ I+ + DG +L PK LH +LTRV+YN+R+K DPLW++ ++ G++
Sbjct: 78 KDIIEQKIIDEQCIGDGLNLKPKSLHCWLTRVLYNKRSKMDPLWSNYIVAGIQ 130
>gi|291241738|ref|XP_002740767.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 208
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 102/215 (47%), Gaps = 51/215 (23%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N P + T P TGTSV+ +K+ G+++AAD LG+
Sbjct: 33 NGPTKHTLQPMTTGTSVLGIKFDGGVMIAADT------------------------LGSY 68
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG 133
G ++ F+++ R + +N G S G +L V+ R
Sbjct: 69 GSLARFRQISR----IYAANNNTILGGS-GDVADFQFLKAVVEQR--------------- 108
Query: 134 VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHEN--LSYEDGVKLLEKCMR 191
+LG V+M+G +E +ATG+G ++A+P+LRD + +N +S ++ L+ KCM+
Sbjct: 109 -----IFLGYVNMVGTAYESPTIATGYGAYMAQPLLRDAYEKNNKMSLQEAKDLITKCMK 163
Query: 192 VLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFW 226
+L YRD + N+ +IA +T++G I P + T W
Sbjct: 164 ILFYRDARSYNRFEIAYVTKDGPVIEPPTSADTNW 198
>gi|195155696|ref|XP_002018737.1| GL25789 [Drosophila persimilis]
gi|194114890|gb|EDW36933.1| GL25789 [Drosophila persimilis]
Length = 242
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 96/210 (45%), Gaps = 5/210 (2%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P G+SV+ ++Y G+L+AAD GS RY+ V+RI I K ++G G D Q
Sbjct: 18 PVAMGSSVIGIRYDKGVLIAADTTVFEGSVPRYQDVDRIFKINKQIIMGGGGNFHDVQMY 77
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ-KYL 141
R + + I D ++ DG + PK L +L RR D LV+ G++ + YL
Sbjct: 78 RRTIGKQISSDRIYQDGFEMKPKSLALWLMNTTNARRLALDATNVELVVAGMQPDEGPYL 137
Query: 142 GMVSMIGVNFEDSHV-ATGFGNHLARPILRDEWHENLSY--EDGVKLLEKCMRVLLYRDR 198
+ D +V ATG ++RD+ + S+ ++ + L+ CM L D
Sbjct: 138 ATIGR-PEGISDGYVAATGPARQTVISLVRDKKPKERSFTEKEAICLIRTCMEKLQCNDA 196
Query: 199 SAVNKLQIAKITEEGTTISQPYALKTFWGF 228
A+ + + T + I PY + W F
Sbjct: 197 CALPQYTMGVCTAQDCHIEGPYKVNEDWTF 226
>gi|221501940|gb|EEE27691.1| proteasome A-type and B-type domain-containing protein, putative
[Toxoplasma gondii VEG]
Length = 137
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 69/126 (54%), Gaps = 13/126 (10%)
Query: 123 DPLWNSLVLGG----------VKNGQK---YLGMVSMIGVNFEDSHVATGFGNHLARPIL 169
DP W S+++ G V QK LG V M G +E+ +ATG G + A ++
Sbjct: 2 DPWWLSVIVAGYQGERSEAREVSEEQKKPFTLGYVDMYGTFYEEEVIATGLGRYFAVTLM 61
Query: 170 RDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
R+ ++S E+ +LLE+CMR+L YRD A N++Q K+T EG ++ +PY L + W +
Sbjct: 62 RNRHRPDMSEEEARQLLEECMRILFYRDCGASNRIQFTKVTAEGVSVEEPYVLDSKWDYE 121
Query: 230 AFQNPT 235
+ T
Sbjct: 122 HYVKKT 127
>gi|198476614|ref|XP_002132408.1| GA25445 [Drosophila pseudoobscura pseudoobscura]
gi|198137777|gb|EDY69810.1| GA25445 [Drosophila pseudoobscura pseudoobscura]
Length = 242
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 96/210 (45%), Gaps = 5/210 (2%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P G+SV+ ++Y G+L+AAD GS RY+ V+RI I K ++G G D Q
Sbjct: 18 PVAMGSSVIGIRYDKGVLIAADTTVFEGSVPRYQDVDRIFKINKQIIMGGGGNFHDVQMY 77
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ-KYL 141
R + + I D ++ DG + PK L +L RR D LV+ G++ + YL
Sbjct: 78 RRTIGKQISSDRIYQDGFEMKPKSLALWLMNTTNARRLALDATNVELVVAGMQPDEGPYL 137
Query: 142 GMVSMIGVNFEDSHV-ATGFGNHLARPILRDEWHENLSY--EDGVKLLEKCMRVLLYRDR 198
+ D +V ATG ++RD+ + S+ ++ + L+ CM + D
Sbjct: 138 ATIGR-PEGISDGYVAATGPARQTVISLVRDKKPKERSFTEKEAICLIRTCMEKIQCNDA 196
Query: 199 SAVNKLQIAKITEEGTTISQPYALKTFWGF 228
A+ + + T + I PY + W F
Sbjct: 197 CALPQYTMGVCTAQDCHIEGPYKVNEDWTF 226
>gi|269866187|ref|XP_002652186.1| 20S proteasome core particle subunit beta 7 [Enterocytozoon
bieneusi H348]
gi|220062998|gb|EED41871.1| 20S proteasome core particle subunit beta 7 [Enterocytozoon
bieneusi H348]
Length = 176
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 100/182 (54%), Gaps = 8/182 (4%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+T TS +A ++++GI++AAD SYG + + RI + ++ L+ +G + DF ++ R
Sbjct: 2 LTTTSTIAFRFREGIIIAADTAVSYGR-LSLCHMNRI-FVFQNVLVAFNGFVGDFHDVKR 59
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK-YLGM 143
L+ D + D+ + + + + +Y RR++ P S+V+ G++ Q +LG
Sbjct: 60 WLE-----DEIRDEKREIDARGIFKLIQLYLYTRRSQMTPKACSVVVAGLEKTQHLFLGC 114
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
++ GV +ED+ ++TGF H P+LR LS + L+++ ++++Y++ A +
Sbjct: 115 ITSKGVFWEDNVISTGFAAHFITPLLRTHPVNTLSLDQAKSLIKEATKIMVYKNACASTE 174
Query: 204 LQ 205
+
Sbjct: 175 FK 176
>gi|34391495|gb|AAN46132.1| 20S proteasome beta 7 subunit, partial [Leishmania major]
Length = 107
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 64/100 (64%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
+G SV+A+KY G+LMAAD SYGS ++ ++ RIK +G HS + A+G +DFQ + +
Sbjct: 3 SGASVIAIKYNGGVLMAADTLLSYGSLAKWPNIPRIKLLGSHSAVCATGSYADFQMMAKQ 62
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPL 125
+++ I M+ + + L P E+ SYL R +Y +R F+P
Sbjct: 63 VEDNIERQRMYYNVDELNPSEVFSYLHRSIYQKRCDFEPC 102
>gi|336111810|gb|AEI16565.1| proteasome [Chelon labrosus]
Length = 101
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 65/99 (65%), Gaps = 2/99 (2%)
Query: 123 DPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRD--EWHENLSYE 180
+PLWN++V+G NG+ +LG V +GV +E V TGFG +LA+P++R+ E ++
Sbjct: 1 NPLWNTVVIGXFYNGESFLGYVDKLGVAYEAPTVXTGFGAYLAQPLMREVLEKKAXITKX 60
Query: 181 DGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQP 219
+ +L+E+C++VL RB + N+ +IA +TEEG I P
Sbjct: 61 EARELVERCLKVLYXRBARSYNRHEIAIVTEEGVEIVGP 99
>gi|397651896|ref|YP_006492477.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|393189487|gb|AFN04185.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 203
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L K+G+++AAD S G+ I K+V +I I +H + +G++ D L+R L
Sbjct: 7 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 66
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY + G + K L + L ++ +K+ P ++GG + L V
Sbjct: 67 KAEANLYKSTV--GKEMSVKALATLLANIL--NGSKYFPYLGWFLVGGYDEKPR-LFSVD 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
M+G ED++ A G G A IL E+ E +S DG+KL K + V + RD + L
Sbjct: 122 MVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLL 181
Query: 206 IAKITEEG 213
+ IT++G
Sbjct: 182 VVTITKDG 189
>gi|269862796|ref|XP_002650978.1| 20S proteasome core particle subunit beta 7 [Enterocytozoon
bieneusi H348]
gi|269865722|ref|XP_002652023.1| 20S proteasome core particle subunit beta 7 [Enterocytozoon
bieneusi H348]
gi|220063300|gb|EED42034.1| 20S proteasome core particle subunit beta 7 [Enterocytozoon
bieneusi H348]
gi|220065322|gb|EED43079.1| 20S proteasome core particle subunit beta 7 [Enterocytozoon
bieneusi H348]
Length = 175
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 93/173 (53%), Gaps = 8/173 (4%)
Query: 64 IGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFD 123
+ ++ L+ +G + DF ++ R L+ D + D+ + + + + +Y RR++
Sbjct: 6 VFQNVLVAFNGFVGDFHDVKRWLE-----DEIRDEKREIDARGIFKLIQLYLYTRRSQMT 60
Query: 124 PLWNSLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDG 182
P S+V+ G++ Q +LG ++ GV +ED+ ++TGF H P+LR + LS +
Sbjct: 61 PKACSVVVAGLEKTQHLFLGCITSKGVFWEDNVISTGFAAHFITPLLRTHPVDTLSLDQA 120
Query: 183 VKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPT 235
L+++ ++++Y+D A N++QIA I+ G + + + T W T Q P+
Sbjct: 121 ESLIKEATKIMVYKDACASNRIQIAVISHTGEIVLKNEKIYTDW--TVAQTPS 171
>gi|18977776|ref|NP_579133.1| proteasome subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|25453238|sp|Q8U125.1|PSB2_PYRFU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18893519|gb|AAL81528.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
Length = 206
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L K+G+++AAD S G+ I K+V +I I +H + +G++ D L+R L
Sbjct: 10 GTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY + G + K L + L ++ +K+ P ++GG + L V
Sbjct: 70 KAEANLYKSTV--GKEMSVKALATLLANIL--NGSKYFPYLGWFLVGGYDEKPR-LFSVD 124
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
M+G ED++ A G G A IL E+ E +S DG+KL K + V + RD + L
Sbjct: 125 MVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTGDGLL 184
Query: 206 IAKITEEG 213
+ IT++G
Sbjct: 185 VVTITKDG 192
>gi|300711728|ref|YP_003737542.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|448296163|ref|ZP_21486224.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
gi|299125411|gb|ADJ15750.1| proteasome beta subunit [Halalkalicoccus jeotgali B3]
gi|445582886|gb|ELY37226.1| proteasome subunit beta [Halalkalicoccus jeotgali B3]
Length = 247
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 114/244 (46%), Gaps = 21/244 (8%)
Query: 2 ESIQAKQGLVGPNDP----IQRTQLP-------YVTGTSVVALKYKDGILMAADMGGSYG 50
ES+ + G P +P + LP TGT+ V L+ +DG+++A DM S G
Sbjct: 11 ESLASSPGQANPYEPELGSLPEADLPEGADAAELKTGTTTVGLRAEDGVVLATDMRASLG 70
Query: 51 STIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL-DELILYDNMWDDGNSLGPKELHS 109
+ + K+V++++ + L +G +S Q L+R L E+ LYD G + L +
Sbjct: 71 NMVSSKTVQKVEDVHPTGALTIAGSVSAAQSLIRTLRAEVNLYDARQ--GEDMSMTALST 128
Query: 110 YLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPIL 169
+ ++ R F VLGGV + ++ + +G E+++ +G G+ A +L
Sbjct: 129 LTSNLL--RSGGF--FIVVPVLGGVDDEGPHIYSMDALGGTTEETYAVSGSGSQFALGVL 184
Query: 170 RDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFT 229
+ E LS E+ + + + + RD ++ N + IA +TEEG I + + F G
Sbjct: 185 EQHYEEGLSVEEARDVAIRSVGSAVERDTASGNGINIATVTEEGVDIER---FEEFEGVD 241
Query: 230 AFQN 233
N
Sbjct: 242 GISN 245
>gi|150403635|ref|YP_001330929.1| proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159904582|ref|YP_001548244.1| proteasome endopeptidase complex [Methanococcus maripaludis C6]
gi|302595750|sp|A9A788.1|PSB_METM6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595838|sp|A6VK02.1|PSB_METM7 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150034665|gb|ABR66778.1| Proteasome endopeptidase complex [Methanococcus maripaludis C7]
gi|159886075|gb|ABX01012.1| Proteasome endopeptidase complex [Methanococcus maripaludis C6]
Length = 219
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 106/208 (50%), Gaps = 10/208 (4%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V L KDG+++A D + G+ I K +++ I + + +G + D Q L+
Sbjct: 11 YMKGTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLI 70
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKY 140
R + E +Y GN++ P + ++ V++ R+ PL L+LGG + NG K
Sbjct: 71 RLISAEAKIYK--MRTGNNMTPLSCTTLISNVLHGNRHY--PLLTQLILGGYDLINGAKL 126
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
+ + G+N E S ATG G+ A +L E+ +++ + G+ + K + + RD +
Sbjct: 127 FSLDPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALSSAMQRDAYS 186
Query: 201 VNKLQIAKITEEGTTISQPYALKTFWGF 228
N + +A I ++G I Y+ + GF
Sbjct: 187 GNGISLAHINKDGVNI---YSDEEIEGF 211
>gi|448468124|ref|ZP_21599755.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
gi|445810867|gb|EMA60881.1| 20S proteasome A and B subunits [Halorubrum kocurii JCM 14978]
Length = 243
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K DG++MA DM S G + K V++++ + L +G +S Q L+
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQSLIST 107
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E LY+ G + + L + ++ R F + +LGGV + ++ +
Sbjct: 108 LKAETSLYETRR--GKDMTMEALSTLTGNLL--RSGAFYIVQP--ILGGVDDEGAHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G E+ + TG G+ A +L E+H++++ ++ ++ K ++ + RD ++ N +
Sbjct: 162 DALGGTTEEEYTVTGSGSQYALGVLEQEYHDDVTVDEATEIAAKAIQSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
+A +TE+G IS+
Sbjct: 222 NVAVVTEDGVDISR 235
>gi|14591201|ref|NP_143277.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|17380245|sp|O50110.1|PSB2_PYRHO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|3257825|dbj|BAA30508.1| 207aa long hypothetical proteasome beta subunit precursor
[Pyrococcus horikoshii OT3]
Length = 207
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDG+++AAD S G+ I ++V +I I +H + +G++ D L+R L
Sbjct: 10 GTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY + G + K L + L +M K+ P ++GG K L V
Sbjct: 70 RAEAKLYYS--QSGKRMSVKALATLLANIM--NGAKYFPYLAWFLVGGYDEKPK-LYSVD 124
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
M+G ED + G G A IL E+ +NL+ E+G+KL K + + RD + + +
Sbjct: 125 MVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSGDGIL 184
Query: 206 IAKITEEG 213
+ IT+EG
Sbjct: 185 VVTITKEG 192
>gi|261402297|ref|YP_003246521.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
vulcanius M7]
gi|302595760|sp|C9REN7.1|PSB_METVM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|261369290|gb|ACX72039.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
vulcanius M7]
Length = 223
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 101/193 (52%), Gaps = 7/193 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L D +++A D S G+ I K +++ I + + +G + D Q ++R L
Sbjct: 6 GTTTVGLICDDAVILATDKRASMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRAL 65
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGM 143
E LY G ++ P+ + L+ ++++ R P +++GG + +G K +
Sbjct: 66 IAEARLYK--MRTGKNISPRACATLLSNILHSSR--MFPFLTQIIIGGYDLTDGPKLFSL 121
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+ G+N E + +TG G+ +A +L E+ ++S E+G+KL K ++ + RD + N
Sbjct: 122 DPLGGMNEEKTFTSTGSGSPIAYGVLEAEYDRDMSIEEGLKLALKALKSAMERDTYSGNG 181
Query: 204 LQIAKITEEGTTI 216
+ +A IT+EG +
Sbjct: 182 VSVAVITKEGVKL 194
>gi|45358258|ref|NP_987815.1| proteasome subunit beta [Methanococcus maripaludis S2]
gi|340623725|ref|YP_004742178.1| proteasome subunit beta [Methanococcus maripaludis X1]
gi|74555067|sp|Q6LZD4.1|PSB_METMP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|44921015|emb|CAF30251.1| proteasome, subunit beta [Methanococcus maripaludis S2]
gi|339903993|gb|AEK19435.1| proteasome subunit beta [Methanococcus maripaludis X1]
Length = 219
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 103/206 (50%), Gaps = 7/206 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V L DG+++A D + G+ I K +++ I + + +G + D Q L+
Sbjct: 11 YMKGTTTVGLLCNDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLI 70
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKY 140
R + E +Y GN++ P + ++ V++ R+ PL L+LGG + NG K
Sbjct: 71 RLISAEAKIYK--MRTGNNMTPLSCTTLISNVLHGNRHY--PLLTQLILGGYDLINGAKL 126
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
+ + G+N E S ATG G+ A +L E+ +++ E G+ + K + + RD +
Sbjct: 127 FSLDPVGGINEESSFTATGSGSPTAYGVLESEYKSDIAIEKGLLIAVKALSSAMQRDAYS 186
Query: 201 VNKLQIAKITEEGTTISQPYALKTFW 226
N + +A I ++G + ++ F
Sbjct: 187 GNGISLAHINKDGVKLYSDAEIEGFL 212
>gi|134045918|ref|YP_001097404.1| proteasome subunit beta [Methanococcus maripaludis C5]
gi|302595749|sp|A4FYA5.1|PSB_METM5 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|132663543|gb|ABO35189.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanococcus maripaludis
C5]
Length = 219
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 102/205 (49%), Gaps = 5/205 (2%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V L KDG+++A D + G+ I K +++ I + + +G + D Q L+
Sbjct: 11 YMKGTTTVGLLCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLI 70
Query: 84 RNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYL 141
R + M GN++ P + ++ V++ R+ PL L+LGG + NG K
Sbjct: 71 RIISAEAKIHKMRT-GNNMTPLSCTTLISNVLHGNRHY--PLLTQLILGGYDLINGAKLF 127
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ + G+N E S ATG G+ A +L E+ +++ + G+ + K + + RD +
Sbjct: 128 SLDPVGGINEESSFTATGSGSPTAYGVLEAEYRSDVTIDKGLLVAVKALSSAMQRDAYSG 187
Query: 202 NKLQIAKITEEGTTISQPYALKTFW 226
N + +A I ++G + ++ F
Sbjct: 188 NGISLAHINKDGVKLYSDAEIEGFL 212
>gi|448445494|ref|ZP_21590392.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
gi|445685018|gb|ELZ37380.1| 20S proteasome A and B subunits [Halorubrum saccharovorum DSM 1137]
Length = 243
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K DG++MA DM S G + K V++++ + L +G +S Q L+
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQHLIST 107
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E LY+ G + + L + ++ R F + +LGGV + ++ +
Sbjct: 108 LKAETSLYETRR--GKDMSMEALSTLTGNLL--RSGAFYIVQP--ILGGVDDEGAHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G E+ + TG G+ A +L E+H++++ ++ ++ K ++ + RD ++ N +
Sbjct: 162 DALGGTTEEEYTVTGSGSQYALGVLEQEYHDDVTVDEATEIAAKAIQSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
+A +T+EG I++
Sbjct: 222 NVAVVTDEGVDITR 235
>gi|242399181|ref|YP_002994605.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
gi|302595734|sp|C6A3R1.1|PSB2_THESM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|242265574|gb|ACS90256.1| Proteasome, beta subunit 2 [Thermococcus sibiricus MM 739]
Length = 199
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K KDG+++AAD S + ++++I PI + +G + D Q L R
Sbjct: 5 TGTTTVGIKLKDGVVLAADTQASLDHMVETLNIKKILPITDRIAITTAGSVGDLQALARM 64
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L+ E Y W G + K + + L+ ++ +K+ P +++GG +
Sbjct: 65 LEAEAKYYQFTW--GKPMTAKAMANLLSNIL--NESKWFPYMVQIIIGGYVEEPTLASLD 120
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNK 203
+ G+ F D++ TG G+ A IL D + E++S ED +L K +R RD + K
Sbjct: 121 PLGGLIF-DNYTTTGSGSPFAIAILEDGYKEDMSIEDARELAIKAVRTAGKRDVYTGERK 179
Query: 204 LQIAKITEEG 213
+Q+ IT+EG
Sbjct: 180 IQVITITKEG 189
>gi|150400310|ref|YP_001324077.1| proteasome endopeptidase complex [Methanococcus vannielii SB]
gi|302595790|sp|A6USJ3.1|PSB_METVS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013013|gb|ABR55465.1| Proteasome endopeptidase complex [Methanococcus vannielii SB]
Length = 219
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 100/196 (51%), Gaps = 7/196 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V L +DG+++A D + G+ I K +++ I + + +G + D Q L+
Sbjct: 11 YMKGTTTVGLICEDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLI 70
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKY 140
R L E +Y GN++ P + + V++ R+ PL L++GG + NG K
Sbjct: 71 RLLSAEAKIYK--MRTGNNMTPLSCTTLTSNVLHGNRHY--PLLTQLIIGGYDLINGPKL 126
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
+ + G+N E S ATG G+ A +L E+ ++ E G+ + K + + RD +
Sbjct: 127 FSLDPVGGINEESSFTATGSGSPTAYGVLEAEYKSEINIEKGLLIAVKALISAMQRDAYS 186
Query: 201 VNKLQIAKITEEGTTI 216
N + +AKI + G T+
Sbjct: 187 GNGISLAKIDKTGVTL 202
>gi|448472548|ref|ZP_21601172.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
gi|445819852|gb|EMA69686.1| 20S proteasome A and B subunits [Halorubrum aidingense JCM 13560]
Length = 243
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V ++ +DG++MA DM S G + K V++++ I L +G +S Q L+
Sbjct: 48 TGTTTVGIRTEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E LY+ G + + L + ++ R F +LGGV + ++ +
Sbjct: 108 LKAETSLYETRR--GKDMSMEALSTLTGNLL--RTGAF--FIVQPILGGVDDDGAHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G E+ + TG G+ A +L E+H++++ E+ + K ++ + RD ++ N +
Sbjct: 162 DALGGTTEEEYTVTGSGSQYALGVLEQEYHDDVTIEEAETIAAKAIQSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
+A +T++G I++
Sbjct: 222 NVAVVTDDGVDITR 235
>gi|242039179|ref|XP_002466984.1| hypothetical protein SORBIDRAFT_01g017905 [Sorghum bicolor]
gi|241920838|gb|EER93982.1| hypothetical protein SORBIDRAFT_01g017905 [Sorghum bicolor]
Length = 65
Score = 80.1 bits (196), Expect = 7e-13, Method: Composition-based stats.
Identities = 38/55 (69%), Positives = 43/55 (78%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
PYVTG V+ALKYKDG +MA D SYGST+RYKSVE IK +GKHSL+G S IS
Sbjct: 2 PYVTGALVIALKYKDGAIMACDTRSSYGSTLRYKSVEHIKAVGKHSLIGTSRVIS 56
>gi|223477879|ref|YP_002582184.1| proteasome subunit beta [Thermococcus sp. AM4]
gi|214033105|gb|EEB73933.1| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 200
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 100/190 (52%), Gaps = 7/190 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K KDG+++AAD S G+ + ++ +I PI + +G + D Q L R
Sbjct: 6 TGTTTVGIKVKDGVVLAADTQASLGNMVETLNIRKILPITDRIAITTAGSVGDVQALARM 65
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L+ + Y W G + + + + L+ ++ NK+ P +++GG + + +
Sbjct: 66 LEAQARYYQFTW--GRPMTTRAMANLLSNIL--NENKWFPYMVQILIGGYVDKPELASVD 121
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNK 203
++ G+ FE + ATG G+ A I+ D + E++S E+ +L + +R RD + K
Sbjct: 122 ALGGLVFE-KYTATGSGSPFAIAIIEDGYREDMSIEEAKELAVRAVRTAGKRDVYTGERK 180
Query: 204 LQIAKITEEG 213
+Q+ IT++G
Sbjct: 181 VQVVVITKDG 190
>gi|296109858|ref|YP_003616807.1| proteasome endopeptidase complex, beta subunit [methanocaldococcus
infernus ME]
gi|295434672|gb|ADG13843.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
infernus ME]
Length = 205
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 6/199 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ + L KD +++AAD S G+ I K+ ++I I + L +G + D Q L+R L
Sbjct: 5 GTTTIGLICKDAVILAADKRASLGNLIADKNAKKIYKIDDNLALTIAGSVGDAQSLVRYL 64
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMV 144
E LY G + P + L+ ++++ R + P +++GG + G K +
Sbjct: 65 TAEAKLY--RMRTGKLMSPLACTTLLSNILHSSR--YFPFLVQMIVGGFDEKGFKLYSLD 120
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+ GVN E ATG G+ +A +L + +++ Y+ GV L+ K ++ + RD + N +
Sbjct: 121 PLGGVNEEKDFTATGSGSPIAYGVLEAGYKKDMDYKKGVSLVLKALQAAMERDTFSGNGV 180
Query: 205 QIAKITEEGTTISQPYALK 223
+A IT++G I + +K
Sbjct: 181 SLALITKDGVKIYEDDEIK 199
>gi|399574445|ref|ZP_10768204.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
gi|399240277|gb|EJN61202.1| proteasome endopeptidase complex subunit beta [Halogranum salarium
B-1]
Length = 241
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V LK +G+++A DM S G + K V++++ I + L +G +S Q L+R+
Sbjct: 46 TGTTTVGLKTSEGVVLATDMRASMGYMVSSKDVQKVEQIHPTAALTIAGSVSAAQSLIRS 105
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E LY+ G + + L + L + R F +LGGV ++ +
Sbjct: 106 LKAETSLYETRR--GQDMSMQALATLLANFL--RSGAF--FVVQPILGGVDEEGPHVYSM 159
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G E+++ TG G+ A +L + E+LS E+ + K ++ + RD ++ N +
Sbjct: 160 DALGGMSEENYTVTGSGSQYALGVLEQHYEEDLSIEEAKTVAAKAIQSAVERDLASGNGI 219
Query: 205 QIAKITEEGTTISQ 218
+A +T+EG I++
Sbjct: 220 NVAVVTDEGVDITR 233
>gi|269865725|ref|XP_002652024.1| 20S proteasome core particle subunit beta 7 [Enterocytozoon
bieneusi H348]
gi|220063296|gb|EED42031.1| 20S proteasome core particle subunit beta 7 [Enterocytozoon
bieneusi H348]
Length = 153
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 79/146 (54%), Gaps = 3/146 (2%)
Query: 91 LYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK-YLGMVSMIGV 149
L D + D+ + + + + +Y RR++ P S+V+ G++ Q +LG ++ GV
Sbjct: 6 LEDEIRDEKREIDARGIFKLIQLYLYTRRSQMTPKACSVVVAGLEKTQHLFLGCITSKGV 65
Query: 150 NFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKI 209
+ED+ ++TGF H P+LR + LS + L+++ ++++Y+D A N++QIA I
Sbjct: 66 FWEDNVISTGFAAHFITPLLRTHPVDTLSLDQAESLIKEATKIMVYKDACASNRIQIAVI 125
Query: 210 TEEGTTISQPYALKTFWGFTAFQNPT 235
+ G + + + T W T Q P+
Sbjct: 126 SHTGEIVLKNEKIYTDW--TVAQTPS 149
>gi|297619257|ref|YP_003707362.1| proteasome endopeptidase complex subunit beta [Methanococcus voltae
A3]
gi|297378234|gb|ADI36389.1| proteasome endopeptidase complex, beta subunit [Methanococcus
voltae A3]
Length = 215
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 104/209 (49%), Gaps = 8/209 (3%)
Query: 21 QLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQ 80
+ Y+ GT+ V + DG+++A D + G+ I K +++ PI ++ + +G + D Q
Sbjct: 4 EYKYMKGTTTVGIACADGVVLATDKRATMGNLIADKEAKKLYPIDEYIAMTIAGSVGDAQ 63
Query: 81 ELLRNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNG 137
L+R + E +Y GN++ P + ++ V++ N+ PL N L++GG V N
Sbjct: 64 SLVRIISAETKIYK--MRTGNNMSPLACTTLMSNVLHG--NRHFPLMNQLIVGGYDVCND 119
Query: 138 QKYLGMVSMI-GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+ L + + G+N E + +TG G+ A +L E+ L +KL K + + R
Sbjct: 120 EPQLYSLDAVGGINEETTFTSTGSGSPTAYGVLEAEYVNKLKTSAALKLAVKAISSAMKR 179
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTF 225
D + N + +AKI + G I ++T
Sbjct: 180 DAYSGNGISLAKIDKNGVKIYTEKEIETI 208
>gi|256810347|ref|YP_003127716.1| proteasome endopeptidase complex subunit beta [Methanocaldococcus
fervens AG86]
gi|302595745|sp|C7P6N4.1|PSB_METFA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256793547|gb|ACV24216.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
fervens AG86]
Length = 224
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 99/193 (51%), Gaps = 7/193 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L D +++A D S G+ + K +++ I + L +G + D Q ++R L
Sbjct: 6 GTTTVGLICDDAVILATDKRASMGNLVADKEAKKLYKIDDYIALTIAGSVGDAQAIVRLL 65
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGM 143
E LY G ++ P + L+ ++++ N++ P L++GG + G K +
Sbjct: 66 TAEAKLYK--MRTGKNISPLACATLLSNILHS--NRYFPFLTQLIIGGYDLLEGAKLFSL 121
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+ G+N E + ATG G+ +A +L + ++ E+G+KL K ++ + RD + N
Sbjct: 122 DPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMPVEEGIKLALKALKSAMERDTYSGNG 181
Query: 204 LQIAKITEEGTTI 216
+ +A IT+EG I
Sbjct: 182 ISLAVITKEGVKI 194
>gi|448456459|ref|ZP_21595228.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
gi|445811935|gb|EMA61932.1| 20S proteasome A and B subunits [Halorubrum lipolyticum DSM 21995]
Length = 243
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K DG++MA DM S G + K V++++ + L +G +S Q L+
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLIST 107
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E LY+ G + + L + ++ R F + +LGGV + ++ +
Sbjct: 108 LKAETSLYETRR--GKDMSMEALSTLTGNLL--RSGAFYIVQP--ILGGVDDEGAHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G E+ + TG G+ A +L E+H+ ++ ++ ++ K ++ + RD ++ N +
Sbjct: 162 DALGGTTEEEYTVTGSGSQYALGVLEQEYHDEVTVDEATEIAAKAIQSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
+A +T++G I++
Sbjct: 222 NVAVVTDDGVDITR 235
>gi|294495429|ref|YP_003541922.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
gi|302595753|sp|D5EAS6.1|PSB_METMS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|292666428|gb|ADE36277.1| proteasome endopeptidase complex, beta component [Methanohalophilus
mahii DSM 5219]
Length = 210
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 104/192 (54%), Gaps = 6/192 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
++ GT+ V + DG+++A + + G+ I K+ ++I I + +G + D Q+L+
Sbjct: 6 HLKGTTTVGIVCSDGVVLATEKRATMGNFIASKTAKKIYQIDDLVGMTTAGSVGDAQQLV 65
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYL 141
R + E LY + S+ K L + L+ ++ +R + PL L++GGV KNG
Sbjct: 66 RMISVESKLYKMRRQE--SITIKGLTTLLSNILGGQR--YFPLMVQLLVGGVDKNGPAIF 121
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ +M G E VATG G+ +A +L D +HE ++ ++G++L + + + RD ++
Sbjct: 122 SLDAMGGNIEETKAVATGSGSPMAYGVLEDRYHEGINVDEGMELAVRALYNAMKRDSASG 181
Query: 202 NKLQIAKITEEG 213
N + + KIT +G
Sbjct: 182 NGIDVVKITADG 193
>gi|448414651|ref|ZP_21577664.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
gi|445681760|gb|ELZ34188.1| proteasome subunit beta [Halosarcina pallida JCM 14848]
Length = 243
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V LK +DG+++A DM S G + K V++++ I L +G +S Q L+R+
Sbjct: 48 TGTTTVGLKTEDGVVLATDMRASLGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLIRS 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+ E+ LY++ G ++ L + L + R F + +LGGV ++ +
Sbjct: 108 IRAEVRLYESRR--GENMSMTALSTLLGNFL--RSGAFYVVQP--ILGGVDEDGPHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E+ + TG G+ A +L E+++ LS ++ + + ++ + RD ++ N +
Sbjct: 162 DPAGSILEEEYTVTGSGSQYALGVLEQEYNDALSIDEAKTVAARAVKSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
I +TE+G I+Q
Sbjct: 222 NICVVTEDGVEITQ 235
>gi|409096228|ref|ZP_11216252.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 201
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 7/190 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K KDG+++AAD S + ++ +I PI + +G + D Q L R
Sbjct: 7 TGTTTVGIKVKDGVVLAADTQASLDHMVETLNIRKILPITDRIAITTAGSVGDVQALARM 66
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L+ E Y W G + + + + L+ ++ NK+ P +++GG + + +
Sbjct: 67 LEAEARYYQFTW--GRPMKTRAMANLLSNIL--NENKWFPYMVQILIGGYVDEPELASLD 122
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNK 203
++ G+ F D + ATG G+ A I+ D + E++S E+ +L + +R RD + K
Sbjct: 123 ALGGLVF-DEYTATGSGSPFAIAIIEDGYREDMSVEEAKELAVRAVRTAGKRDVYTGDRK 181
Query: 204 LQIAKITEEG 213
+Q+ IT +G
Sbjct: 182 VQVVTITRDG 191
>gi|222445334|ref|ZP_03607849.1| hypothetical protein METSMIALI_00962 [Methanobrevibacter smithii
DSM 2375]
gi|261350105|ref|ZP_05975522.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
gi|222434899|gb|EEE42064.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobrevibacter smithii DSM 2375]
gi|288860891|gb|EFC93189.1| proteasome subunit beta [Methanobrevibacter smithii DSM 2374]
Length = 204
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 101/188 (53%), Gaps = 8/188 (4%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDG++ A++ S G+ + +K E+I I H + +G + D Q L++ +
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ E+ LY +D S+ K S ++ + P++ +LGG+ + L +
Sbjct: 68 EAEVSLYQMRNNDKMSV--KAAASVTANIL-----RSGPMYVQTLLGGMDGDKPSLYSLD 120
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G ED++++TG G+ +A +L D +HE ++ ++G+++ + ++ RD + N
Sbjct: 121 PAGGMIEDTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYL 180
Query: 206 IAKITEEG 213
+AK+T++G
Sbjct: 181 VAKVTKDG 188
>gi|148643097|ref|YP_001273610.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
gi|302595842|sp|A5UM14.1|PSB_METS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|148552114|gb|ABQ87242.1| proteasome, beta subunit [Methanobrevibacter smithii ATCC 35061]
Length = 204
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 101/188 (53%), Gaps = 8/188 (4%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDG++ A++ S G+ + +K E+I I H + +G + D Q L++ +
Sbjct: 8 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKINDHIVTTIAGSVGDAQNLMKII 67
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ E+ LY +D S+ K S ++ + P++ +LGG+ + L +
Sbjct: 68 EAEVSLYQMRNNDKISV--KAAASVTANIL-----RSGPMYVQTLLGGMDGDKPSLYSLD 120
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G ED++++TG G+ +A +L D +HE ++ ++G+++ + ++ RD + N
Sbjct: 121 PAGGMIEDTYISTGSGSIVAYGVLEDRYHEEITTDEGLEIAVRAIKAASERDTFSGNGYL 180
Query: 206 IAKITEEG 213
+AK+T++G
Sbjct: 181 VAKVTKDG 188
>gi|313126409|ref|YP_004036679.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|448286253|ref|ZP_21477487.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
gi|312292774|gb|ADQ67234.1| proteasome endopeptidase complex, beta component [Halogeometricum
borinquense DSM 11551]
gi|445575086|gb|ELY29568.1| proteasome subunit beta [Halogeometricum borinquense DSM 11551]
Length = 243
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 99/194 (51%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V LK +DG+++A DM S G + K+V++++ I L +G +S Q L+R+
Sbjct: 48 TGTTTVGLKTEDGVVLATDMRASLGHMVSSKNVQKVEEIHPTGALTIAGSVSAAQSLIRS 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+ E+ LY++ G + + L + L + R F + +LGG + ++ +
Sbjct: 108 IRAEVRLYESRR--GEDMSMQALSTLLGNFL--RSGAFYIVQP--ILGGFDDEGAHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E+ + TG G+ A +L E+ +LS E+ + ++ + RD ++ N +
Sbjct: 162 DPAGSILEEEYTVTGSGSQYALGVLEQEYSNDLSIEEAKTTAARAIKSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
+ +TE+G I+Q
Sbjct: 222 NVCVVTEDGVEITQ 235
>gi|212224577|ref|YP_002307813.1| proteasome subunit beta 2 [Thermococcus onnurineus NA1]
gi|302595811|sp|B6YXV3.1|PSB2_THEON RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|212009534|gb|ACJ16916.1| proteasome, beta subunit 2 [Thermococcus onnurineus NA1]
Length = 200
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 93/185 (50%), Gaps = 7/185 (3%)
Query: 33 LKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD-ELIL 91
+K KDGI++AAD S G + ++ +I PI + +G + D Q L R L+ E
Sbjct: 13 IKAKDGIVLAADTQASLGHMVETLNIRKIIPITDRIAITTAGSVGDVQALARMLEAEARY 72
Query: 92 YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
Y W G + K + + L+ ++ NK+ P ++LGG + + G+ F
Sbjct: 73 YQFTW--GKPMSTKAMANLLSNILNG--NKWFPYLVQIILGGYVEEPTLANLDPLGGLIF 128
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNKLQIAKIT 210
+D + ATG G+ A +L D + +++S E+ +L + +R RD + K+QI IT
Sbjct: 129 DD-YTATGSGSPFAIAVLEDGYKKDMSIEEAKELAVRAVRTAGKRDVYTGSRKIQIVAIT 187
Query: 211 EEGTT 215
+EG T
Sbjct: 188 KEGIT 192
>gi|355714022|gb|AES04863.1| proteasome subunit, beta type, 4 [Mustela putorius furo]
Length = 125
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 55/74 (74%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
PI RTQ P VTGTSV+ +K++ G+++AADM GSYGS R++++ RI + ++LGASG+
Sbjct: 52 PITRTQNPMVTGTSVLGVKFEGGVVIAADMLGSYGSLARFRNISRIMRVNDSTMLGASGD 111
Query: 76 ISDFQELLRNLDEL 89
+DFQ L + L ++
Sbjct: 112 YADFQYLKQVLGQM 125
>gi|375082621|ref|ZP_09729674.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
gi|374742699|gb|EHR79084.1| proteasome subunit beta 2 [Thermococcus litoralis DSM 5473]
Length = 199
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 7/190 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K KDG+++AAD S + ++++I PI + +G + D Q L R
Sbjct: 5 TGTTTVGIKLKDGVVLAADTQASLDHMVETLNIKKILPITDKIAITTAGSVGDLQALARM 64
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L+ E Y W G + K + + L+ ++ +K+ P +++GG +
Sbjct: 65 LEAEARYYQFTW--GKPMTAKAMANLLSNIL--NESKWFPYMVQIIIGGYVEEPTLASLD 120
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNK 203
+ G+ F D++ ATG G+ A IL D + E+++ E+ +L + +R RD + K
Sbjct: 121 PLGGLIF-DNYTATGSGSPFAIAILEDGYKEDMTIEEARELAIRAVRTAGKRDVYTGERK 179
Query: 204 LQIAKITEEG 213
+Q+ IT++G
Sbjct: 180 IQVVTITKDG 189
>gi|255513744|gb|EET90009.1| Proteasome endopeptidase complex [Candidatus Micrarchaeum
acidiphilum ARMAN-2]
Length = 210
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 99/193 (51%), Gaps = 8/193 (4%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V L DG+++AAD + + I ++ I ++ + +G + D QEL+
Sbjct: 9 YMKGTTTVGLVCTDGVVIAADSRATMDTFIASTEARKVWKIDENLGMTIAGLVGDAQELI 68
Query: 84 RNLDELILYDNMW--DDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYL 141
R L + + ++ ++ + P+ + L+ ++ + NK P + L++GGV++G+ Y+
Sbjct: 69 RILK---IQNEIYKMNERKQMSPRSAATLLSIIL--QENKMMPFYVQLIVGGVEDGKGYV 123
Query: 142 -GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
+ + G E ATG G+ A L D + L+ +D +K+ K + + + RD +
Sbjct: 124 YNLDAAGGYTQESRFTATGSGSLTALGYLEDSYKPGLTTKDAIKIAAKALLIAMQRDSAT 183
Query: 201 VNKLQIAKITEEG 213
N + IA IT G
Sbjct: 184 GNNMTIAAITSRG 196
>gi|240104109|ref|YP_002960418.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595730|sp|C5A2D5.1|PSB2_THEGJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|239911663|gb|ACS34554.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 200
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 100/190 (52%), Gaps = 7/190 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K K+G+++AAD S G+ + ++ +I PI + +G + D Q L R
Sbjct: 6 TGTTTVGIKVKEGVVLAADTQASLGNMVETLNIRKILPITDRIAITTAGSVGDVQALARM 65
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L+ + Y W G + + + + L+ ++ NK+ P +++GG + + +
Sbjct: 66 LEAQARYYQFTW--GRPMTTRAMANLLSNIL--NENKWFPYMVQIIIGGYVDKPELASVD 121
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNK 203
++ G+ FE + ATG G+ A I+ D + E++S E+ +L + ++ RD + K
Sbjct: 122 ALGGLVFE-KYTATGSGSPFAIAIIEDGYREDMSIEEAKELAVRAVKTAGKRDVYTGERK 180
Query: 204 LQIAKITEEG 213
+Q+ IT++G
Sbjct: 181 VQVVVITKDG 190
>gi|269986877|gb|EEZ93154.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
acidiphilum ARMAN-4]
Length = 206
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ + L YKDG+++AAD + + K+ E++ I + +G ++D Q ++R
Sbjct: 6 TGTTTLGLVYKDGVILAADRRATADHIVANKNAEKVMAISGSIGITTAGMVADLQAMVRL 65
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+ EL LY+ G+ L S L+ V++N+R + ++ ++GG K +
Sbjct: 66 MRSELTLYE--IRSGSKLDTDGAVSLLSAVLFNKRLSLNLIYGEFIVGGYDTAPKLFS-I 122
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G +D TG G A +L ++ +N+S E+ VKL K + + RD +
Sbjct: 123 DEAGGQGKDKFTVTGSGGVFALGVLEGDYKDNMSEEEAVKLAYKAISSSIRRDVYTGEGI 182
Query: 205 QIAKITEEG 213
IA I ++G
Sbjct: 183 DIAVINKKG 191
>gi|448576104|ref|ZP_21642147.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
gi|445729784|gb|ELZ81378.1| proteasome subunit beta [Haloferax larsenii JCM 13917]
Length = 243
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K +DG+++A DM S G + K V++++ I + L +G +S Q L+ N
Sbjct: 48 TGTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTAALTIAGSVSAAQSLISN 107
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E+ LY+ G + + L + + + R F +LGGV ++ +
Sbjct: 108 LKAEVRLYEARR--GEDMSMQALSTLVGNFL--RSGAF--FVVQPILGGVDEDGGHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E+ + TG G+ A +L E+ ++LS ++ ++ +R + RD ++ N +
Sbjct: 162 DPAGSILEEEYTVTGSGSQYALGVLEREYSDDLSVDEAKQVATNAIRAAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
IA +T+EG + +
Sbjct: 222 NIAVVTDEGVDVQR 235
>gi|330835873|ref|YP_004410601.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329568012|gb|AEB96117.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 196
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 99/186 (53%), Gaps = 4/186 (2%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
++ V +K +DGI++ A SYG + KS +++ PI + + G +G D Q L R ++
Sbjct: 6 STAVGVKVQDGIILGAVRRLSYGGYVLSKSAKKVFPIARFGI-GGAGLFGDLQALTRIMN 64
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
I Y ++++ + K L+ ++Y + K+ P + ++ GGV +GQ L ++ +
Sbjct: 65 ANIKYYELYNN-RPISTKAAAKLLSIILY--QYKYMPFISEVLFGGVDDGQPQLYVLDPL 121
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G +D + A G G ++ +L E++E+++ G +L K +R RD ++ + + I
Sbjct: 122 GSLLDDVYAAVGSGARVSIGVLEAEYNESMTLMQGKELTIKSLRASAERDVTSGDGIDIL 181
Query: 208 KITEEG 213
I+ +G
Sbjct: 182 TISRDG 187
>gi|290559800|gb|EFD93124.1| Proteasome endopeptidase complex [Candidatus Parvarchaeum
acidophilus ARMAN-5]
Length = 206
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 95/189 (50%), Gaps = 4/189 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ + L YKDG+++AAD + + K+ E++ I + + +G ++D Q ++R
Sbjct: 6 TGTTTLGLVYKDGVILAADRRATADHIVANKNAEKVMSISSNIGVTTAGMVADLQAMVRL 65
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+ EL LY+ G+ L S L+ V++N+R + ++ ++GG K +
Sbjct: 66 MRSELTLYE--IRAGSKLDTDGAVSLLSAVLFNKRLSLNLIYGEFIIGGYDTEPKLFS-I 122
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G +D TG G A +L ++ +N++ E+G+KL K + + RD +
Sbjct: 123 DEAGGQGKDKFTVTGSGGVFALGVLEGDYKDNMTEEEGIKLAYKAISSSIRRDVYTGEGV 182
Query: 205 QIAKITEEG 213
IA I ++G
Sbjct: 183 DIAVINKKG 191
>gi|212223310|ref|YP_002306546.1| proteasome subunit beta [Thermococcus onnurineus NA1]
gi|302595732|sp|B6YSW2.1|PSB1_THEON RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|212008267|gb|ACJ15649.1| proteasome, beta subunit [Thermococcus onnurineus NA1]
Length = 203
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDG+++AAD S G+ + K V ++ I H L +G + D L+R L
Sbjct: 7 GTTTVGIVCKDGVVLAADRRASLGNMVLSKEVTKVFQIDDHLALAGAGSVGDILSLVRLL 66
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E+ LY G + K L + + +++ R F P + ++ G + L +
Sbjct: 67 RAEVKLYRAKV--GREISVKALATLTSNILHGSR--FMPYFGWFLIAGYDE-KPALYSLD 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
M G ED A G G LA +L D + ++++ E+GVKL K +++ RD + +
Sbjct: 122 MAGGVTEDKFTAAGSGMELAFAVLEDGYKDDINVEEGVKLALKAIKIATRRDVFTGDGIT 181
Query: 206 IAKITEEG 213
+ +TEEG
Sbjct: 182 LVTVTEEG 189
>gi|70606469|ref|YP_255339.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066683|ref|YP_007433765.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449068957|ref|YP_007436038.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
gi|121697373|sp|Q4JAY3.1|PSB1_SULAC RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|68567117|gb|AAY80046.1| proteasome protease subunit [Sulfolobus acidocaldarius DSM 639]
gi|449035191|gb|AGE70617.1| proteasome protease subunit [Sulfolobus acidocaldarius N8]
gi|449037465|gb|AGE72890.1| proteasome protease subunit [Sulfolobus acidocaldarius Ron12/I]
Length = 195
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
+ + +K KDG+++AA+ SYG + KS ++ +G+ + GA G + D Q L R ++
Sbjct: 6 ATAIGIKTKDGVVLAAERRLSYGDFVLSKSARKVFKLGRFGIAGA-GIVGDIQTLTRIMN 64
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
I Y M++ + + L+ ++Y +NK P + L+ GGV L ++ I
Sbjct: 65 VEIKYYEMYNS-RKISARAAAKLLSVILY--QNKVLPYISELLFGGVDEDGPKLFILDPI 121
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
G EDS+ A G G +A +L E++E+L+ E +L K M+ + RD
Sbjct: 122 GSLIEDSYAAVGSGARVAIGVLEAEYNESLTSEAAKELAIKSMKSAVERD 171
>gi|146305014|ref|YP_001192330.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595851|sp|A4YJ04.1|PSB2_METS5 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145703264|gb|ABP96406.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 196
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 98/186 (52%), Gaps = 4/186 (2%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
++ V ++ +DG+++ A SYG + KS +++ PI + + G +G D Q L R ++
Sbjct: 6 STAVGIRLQDGVILGAVRRLSYGGYVLSKSAKKVFPISRFGI-GGAGLFGDLQALTRIMN 64
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
I Y ++++ + + L+ ++Y + K+ P + ++ GGV NG+ L ++ +
Sbjct: 65 ANIKYYELYNN-RPISTRAAAKLLSIILY--QYKYMPFISEVLFGGVDNGEPQLYVLDPL 121
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G +D + A G G +A +L E+ E L+ G +L K +R RD ++ + + I
Sbjct: 122 GSLLDDIYAAVGSGARVAIGVLEAEYSEKLTLTQGRELTIKSLRASAERDVTSGDGIDIL 181
Query: 208 KITEEG 213
I+++G
Sbjct: 182 TISKDG 187
>gi|341581964|ref|YP_004762456.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
gi|340809622|gb|AEK72779.1| proteasome subunit beta 1 [Thermococcus sp. 4557]
Length = 203
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDG+++AAD S G+ + ++V ++ I H L +G + D L+R L
Sbjct: 7 GTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRLL 66
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY G + K L + + V++ R F P + ++ G G+ L V
Sbjct: 67 RAEAKLYRA--KVGKEMSVKALATLTSNVLHGSR--FMPYFGWFLIAG-HTGEPGLYSVD 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
M G ED A G G A IL E+ EN++ E+GVKL + ++ RD +
Sbjct: 122 MAGGVTEDRFTAAGSGMEFAFSILEAEFKENMTLEEGVKLALRAIKAATRRDVFTGGGVT 181
Query: 206 IAKITEEG 213
+ +T+EG
Sbjct: 182 LVTVTDEG 189
>gi|336121951|ref|YP_004576726.1| proteasome endopeptidase complex subunit beta [Methanothermococcus
okinawensis IH1]
gi|334856472|gb|AEH06948.1| proteasome endopeptidase complex, beta subunit [Methanothermococcus
okinawensis IH1]
Length = 220
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 98/196 (50%), Gaps = 7/196 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ + + KDG+++A D + G+ I K +++ I + + +G + D Q L+
Sbjct: 10 YMKGTTTIGMVCKDGVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQSLV 69
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN--GQKY 140
R + E +Y GN++ P + L+ +++ N+ P L++GG N G K
Sbjct: 70 RMISAETKIYK--MRTGNNMPPHSCATLLSNILHG--NRHFPFLTQLIIGGYDNLHGPKL 125
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
+ + G+N E S +TG G+ A +L E+ ++++ G +L K + + RD +
Sbjct: 126 FSLDPVGGLNEETSFTSTGSGSPTALGVLEAEYKKDMTINKGKELAVKALISAMERDAYS 185
Query: 201 VNKLQIAKITEEGTTI 216
N + +A I E G I
Sbjct: 186 GNGISLAVIDENGVKI 201
>gi|389847077|ref|YP_006349316.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|448614975|ref|ZP_21664003.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|388244383|gb|AFK19329.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
gi|445753062|gb|EMA04481.1| proteasome beta subunit [Haloferax mediterranei ATCC 33500]
Length = 245
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K +G+++A DM S G + K V++++ I L +G +S Q L+ +
Sbjct: 48 TGTTTVGIKTDEGVVLATDMRASLGHMVSSKDVQKVEEIHPRGALTIAGSVSAAQSLISS 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E+ LY++ G + + L + + + R F + +LGGV + ++ +
Sbjct: 108 LRAEVRLYESRR--GEDMSMQALSTLVGNFL--RSGGFYIVQP--ILGGVDDEGAHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E+ + TG G+ A +L E+ E+LS ++ ++ K +R + RD ++ N +
Sbjct: 162 DPAGSILEEEYTVTGSGSQYALGVLEQEFSEDLSIDEAREVATKAIRSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
IA +TE+G I +
Sbjct: 222 NIAVVTEDGVDIQR 235
>gi|14590176|ref|NP_142241.1| proteasome subunit beta [Pyrococcus horikoshii OT3]
gi|74570532|sp|O57983.1|PSB1_PYRHO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|3256634|dbj|BAA29317.1| 197aa long hypothetical proteasome beta subunit [Pyrococcus
horikoshii OT3]
Length = 197
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K KDG+++AAD S + ++ +I PI + +G + D Q + R
Sbjct: 5 TGTTTVGIKVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARI 64
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L+ E Y W G + K + + L+ ++ NK+ P +++GG + +
Sbjct: 65 LEAEARYYYFAW--GRPMTTKAMANLLSNIL--NENKWFPYLVQIIIGGYVDEPTIANLD 120
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNK 203
G+ F D++ ATG G A IL + + ENL E+ +L K ++ RD + K
Sbjct: 121 PYGGLIF-DNYTATGSGTPFAIAILEEGYKENLGIEEAKELAIKAIKAAGSRDVYTGSKK 179
Query: 204 LQIAKITEEG 213
+Q+ IT+EG
Sbjct: 180 VQVVTITKEG 189
>gi|448591212|ref|ZP_21650891.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
gi|445733768|gb|ELZ85333.1| proteasome subunit beta [Haloferax elongans ATCC BAA-1513]
Length = 243
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K +DG+++A DM S G + K V++++ I + L +G +S Q L+ N
Sbjct: 48 TGTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTAALTIAGSVSAAQSLISN 107
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E+ LY+ G + + L + + + R F +LGGV ++ +
Sbjct: 108 LKAEVRLYEARR--GEDMSMQALSTLVGNFL--RSGAF--FVVQPILGGVDEDGGHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E+ + TG G+ A +L E+ ++L+ ++ ++ +R + RD ++ N +
Sbjct: 162 DPAGSILEEEYTVTGSGSQYALGVLEREYSDDLTVDEAKQVATNAIRAAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
IA +T+EG + +
Sbjct: 222 NIAVVTDEGVDVQR 235
>gi|375082946|ref|ZP_09729987.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
gi|374742376|gb|EHR78773.1| proteasome subunit beta 1 [Thermococcus litoralis DSM 5473]
Length = 204
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 94/190 (49%), Gaps = 6/190 (3%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+ GT+ V + KDG+++AADM S G+ + K V +I I H L +G + D L+R
Sbjct: 4 IKGTTTVGIVCKDGVVLAADMRASLGNMVLSKGVSKIFQIDDHLALAGAGSVGDILSLVR 63
Query: 85 NL-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
L E LY G + K L + + ++ RR + P + ++ G + + L
Sbjct: 64 LLRAEAKLYRARV--GREMSTKALATLTSNILSGRR--YFPYFGWFLVAGY-DEKPGLYS 118
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+ M G ED +V+ G G A +L +E+ E ++ + GVKL K + + RD +
Sbjct: 119 IDMAGGITEDKYVSAGSGMEFAYSVLDNEYDEKMNVKKGVKLAIKAINTAIKRDVFTGDG 178
Query: 204 LQIAKITEEG 213
+ + IT+EG
Sbjct: 179 IMVVVITKEG 188
>gi|110668567|ref|YP_658378.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|385804032|ref|YP_005840432.1| proteasome subunit beta [Haloquadratum walsbyi C23]
gi|121689658|sp|Q18GX3.1|PSB_HALWD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|109626314|emb|CAJ52772.1| proteasome beta subunit [Haloquadratum walsbyi DSM 16790]
gi|148508113|gb|ABQ75907.1| proteasome beta subunit [uncultured haloarchaeon]
gi|339729524|emb|CCC40787.1| proteasome beta subunit [Haloquadratum walsbyi C23]
Length = 243
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V LK +DG ++A DM S G + K V++++ I L +G +S Q L+ +
Sbjct: 48 TGTTTVGLKTQDGTVLATDMRASLGRMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISS 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+ E+ LY+ G + + L + L + R F +LGGV + ++ +
Sbjct: 108 IRAEVRLYEARR--GEDMSMEALSTLLGNFL--RSGGF--FIVQPILGGVDDDGPHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E+ + TG G+ A +L +++E+LS E+ + + + + RD ++ N +
Sbjct: 162 DPAGSIIEEEYTVTGSGSQYALGVLEQQYNEDLSIEEAKTVAARSIESAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
+ +TE+G I+Q
Sbjct: 222 NVCVVTEDGVEITQ 235
>gi|332796484|ref|YP_004457984.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
gi|332694219|gb|AEE93686.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
Length = 196
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
++ V +K DG+++AA+ SYG + KS +++ IG+ + GA G D Q L R ++
Sbjct: 6 STAVGIKLNDGVILAAERRLSYGGYVLSKSAKKVHIIGRFGIAGA-GLFGDLQALTRIMN 64
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
I Y ++++ + K L+ ++Y + K+ P + ++ GV NG L ++ +
Sbjct: 65 AEIKYYELYNE-KPISTKAAAKLLSIILY--QYKYMPFISEILFAGVDNGIPQLYVLDPL 121
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G +D + A G G +A +L E+ +N+ + G ++ K ++ + RD ++ + + I
Sbjct: 122 GSLLDDVYAAVGSGARVAIGVLEAEYDQNMPLDKGKEIAIKSIKASIERDVTSGDGIDIL 181
Query: 208 KITEEGTTISQ--PY 220
+ + G T ++ PY
Sbjct: 182 ILDKTGKTYTEYIPY 196
>gi|448503545|ref|ZP_21613174.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
gi|445691746|gb|ELZ43929.1| 20S proteasome A and B subunits [Halorubrum coriense DSM 10284]
Length = 243
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K +DG++MA DM S G + K V++++ I L +G +S Q L+
Sbjct: 48 TGTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E LY+ S+ E S LT + R F +LGGV + ++ +
Sbjct: 108 LRAETSLYEARRSKDMSM---EALSTLTGNLL-RSGAF--FVVQPILGGVDDEGAHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G E+ + TG G+ A +L E+ + +S ++ + K ++ + RD ++ N +
Sbjct: 162 DALGGTTEEEYTVTGSGSQYALGVLEQEYDDEVSIDEAKTIAAKAIQSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
+A +T++G I++
Sbjct: 222 NVAVVTDDGVDITR 235
>gi|448585472|ref|ZP_21647865.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
gi|445726172|gb|ELZ77789.1| proteasome subunit beta [Haloferax gibbonsii ATCC 33959]
Length = 243
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K +DG+++A DM S G + K V++++ I L +G +S Q L+ +
Sbjct: 48 TGTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISS 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E+ LY+ G + + L + + + R F + +LGGV ++ +
Sbjct: 108 LRAEVRLYEARR--GEDMSMQALSTLVGNFL--RSGGFYVVQP--ILGGVDETGPHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E+ + TG G+ A +L E+ + LS ++ ++ K +R + RD ++ N +
Sbjct: 162 DPAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIDEAKQVATKAIRSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
IA +TE+G I +
Sbjct: 222 NIAVVTEDGVDIQR 235
>gi|18976531|ref|NP_577888.1| multicatalytic endopeptidase complex beta subunit [Pyrococcus
furiosus DSM 3638]
gi|397652128|ref|YP_006492709.1| proteasome subunit beta [Pyrococcus furiosus COM1]
gi|74552258|sp|Q8U4C9.1|PSB1_PYRFU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18892084|gb|AAL80283.1| proteasome, subunit beta (multicatalytic endopeptidase complex beta
subunit) [Pyrococcus furiosus DSM 3638]
gi|393189719|gb|AFN04417.1| proteasome subunit beta [Pyrococcus furiosus COM1]
Length = 196
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 7/190 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K KDG+++AAD S + ++++I PI + +G + D Q L R
Sbjct: 5 TGTTTVGIKVKDGVVLAADTQASLDHMVETLNIKKIIPITDRIAITTAGSVGDVQMLARY 64
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L+ E Y W G + K + + L+ ++ N++ P +++GG + +
Sbjct: 65 LEAEARYYYFTW--GRPMTTKAMANLLSNIL--NENRWFPYLVQIIIGGYVDEPTIANLD 120
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNK 203
G+ F+D + ATG G A +L + + E+L+ E+ +L + +R RD + K
Sbjct: 121 PFGGLIFDD-YTATGSGTPFAIAVLEEGYREDLTIEEAKELAIRAVRAAGRRDVYTGSKK 179
Query: 204 LQIAKITEEG 213
+Q+ IT++G
Sbjct: 180 VQVVTITKDG 189
>gi|448603032|ref|ZP_21656853.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|448624647|ref|ZP_21670595.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
gi|445746228|gb|ELZ97690.1| proteasome subunit beta [Haloferax sulfurifontis ATCC BAA-897]
gi|445749852|gb|EMA01294.1| proteasome subunit beta [Haloferax denitrificans ATCC 35960]
Length = 243
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K +DG+++A DM S G + K V++++ I L +G +S Q L+ +
Sbjct: 48 TGTTTVGIKTEDGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISS 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E+ LY+ G + + L + + + R F + +LGGV ++ +
Sbjct: 108 LRAEVRLYEARR--GEDMSMQALSTLVGNFL--RSGGFYVVQP--ILGGVDETGPHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E+ + TG G+ A +L E+ + LS ++ ++ K +R + RD ++ N +
Sbjct: 162 DPAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIDEAKQVATKAIRSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
IA +TE+G I +
Sbjct: 222 NIAVVTEDGVDIQR 235
>gi|315230761|ref|YP_004071197.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315183789|gb|ADT83974.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 199
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 7/190 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K K+G+++AAD S + ++++I PI + +G + D Q L R
Sbjct: 5 TGTTTVGIKVKEGVVLAADTQASLDHMVETLNIKKILPITDRIAITTAGSVGDVQMLARM 64
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L+ E Y W G + K + + L+ ++ NK+ P +++GG +
Sbjct: 65 LEAEARYYQFTW--GKPMTAKAMANLLSNIL--NENKWFPYLVQIIIGGYVEEPTLANLD 120
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNK 203
+ G+ F+D + ATG G+ A IL + + +++S E+ +L + +R RD + K
Sbjct: 121 PLGGLIFDD-YTATGSGSPFAIAILEEGYRKDMSIEEARELAIRAVRTAGKRDVYTGDRK 179
Query: 204 LQIAKITEEG 213
+Q+ IT+EG
Sbjct: 180 IQVVVITKEG 189
>gi|448727988|ref|ZP_21710328.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
gi|445788654|gb|EMA39360.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
Length = 225
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 90/187 (48%), Gaps = 7/187 (3%)
Query: 31 VALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL-DEL 89
V L +G+++AADM S G+ + K+ +I I + L SG +S Q L+ +L E+
Sbjct: 35 VGLTAAEGVVLAADMRASAGNMVASKNARKILQIHSSAALTISGSVSAAQSLVESLRAEV 94
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGV 149
LY+ D SL + L V NR + VLGGV + ++ + G
Sbjct: 95 RLYETRRDTTMSL------NALANVTANRLRSGNFQIVQPVLGGVDDEGAHVYSIGPGGS 148
Query: 150 NFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKI 209
E+++ A+G G+ A +L E+ E S +D + ++ RD ++ N L +A I
Sbjct: 149 VMEETYAASGSGSPFALGVLEGEYDEEASVDDARTTAARAVQSATERDTASGNGLSLATI 208
Query: 210 TEEGTTI 216
TEEG I
Sbjct: 209 TEEGVDI 215
>gi|448428541|ref|ZP_21584273.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|448450269|ref|ZP_21592168.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|448481610|ref|ZP_21604961.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
gi|448507503|ref|ZP_21615014.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|448523281|ref|ZP_21618634.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|155212701|gb|ABT17422.1| proteasome beta subunit [Halorubrum sp. TP009]
gi|445676010|gb|ELZ28535.1| 20S proteasome A and B subunits [Halorubrum terrestre JCM 10247]
gi|445698458|gb|ELZ50502.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 9100]
gi|445701680|gb|ELZ53656.1| 20S proteasome A and B subunits [Halorubrum distributum JCM 10118]
gi|445812121|gb|EMA62117.1| 20S proteasome A and B subunits [Halorubrum litoreum JCM 13561]
gi|445821863|gb|EMA71647.1| 20S proteasome A and B subunits [Halorubrum arcis JCM 13916]
Length = 243
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K DG++MA DM S G + K V++++ I L +G +S Q L+
Sbjct: 48 TGTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E LY+ G + + L + ++ R F +LGGV + ++ +
Sbjct: 108 LRAETSLYEARR--GKDMSMEALSTLTGNLL--RSGAF--FVVQPILGGVDDEGAHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G E+ + TG G+ A +L E+ ++++ ++ + K ++ + RD ++ N +
Sbjct: 162 DALGGTTEEEYTVTGSGSQYALGVLEQEYDDDVTIDEAKTIAAKAIQSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
+A +T++G I++
Sbjct: 222 NVAVVTDDGVEITR 235
>gi|169235741|ref|YP_001688941.1| proteasome beta subunit [Halobacterium salinarum R1]
gi|302595858|sp|B0R4C8.1|PSB_HALS3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|302595910|sp|Q9HR36.2|PSB_HALSA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|167726807|emb|CAP13593.1| proteasome beta subunit [Halobacterium salinarum R1]
Length = 243
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 10/193 (5%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGS-TIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
TGT++V L +DG+LMA+DM S G I K+V++++ I ++ L SG + Q +R
Sbjct: 47 TGTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIR 106
Query: 85 NL-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL-VLGGVKNGQKYLG 142
+L E LY+ G + L + + ++ + P + + +LGGV + ++
Sbjct: 107 SLRAEANLYEARR--GEYMSIDALSTMASNLL-----RGGPFFRVVPILGGVDDDGGHVF 159
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ G + D++ A G G A +L E+ E+L+ D ++ ++ RD ++ N
Sbjct: 160 SLDPAGSSMSDTYTAQGSGMPYALGVLEQEYSEDLTMADAEQVAAHAVKSASERDTASGN 219
Query: 203 KLQIAKITEEGTT 215
+ I KIT +G T
Sbjct: 220 GIHITKITHDGLT 232
>gi|305664308|ref|YP_003860596.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304378877|gb|ADM28716.1| proteasome endopeptidase complex, beta subunit [Ignisphaera
aggregans DSM 17230]
Length = 200
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 93/189 (49%), Gaps = 3/189 (1%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
VTG + V +K DG+++AA+ SYG I ++ +++ I H ++ A+G +D Q L R
Sbjct: 7 VTGATAVGIKVNDGVVVAAEKRISYGGYIVSRAGKKVFRIADHMVIAAAGLFADMQSLSR 66
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+ I+Y + + + + L+ ++Y+ K P + ++ G +L ++
Sbjct: 67 IISAEIMYRELLSS-SKMRVRAAAKLLSAILYSY--KLMPFLSEIIFAGFDEEGYHLYVL 123
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G ED + A G G +A ++ E+ L+ + +L K ++ + RD + + +
Sbjct: 124 DPVGSIIEDDYAAIGTGASIAIGVIESEYKNTLTIDQATELAIKSVKAAISRDAVSGDGI 183
Query: 205 QIAKITEEG 213
IA +T G
Sbjct: 184 DIAVVTNNG 192
>gi|222479043|ref|YP_002565280.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
gi|302595813|sp|B9LTS6.1|PSB_HALLT RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|222451945|gb|ACM56210.1| 20S proteasome A and B subunits [Halorubrum lacusprofundi ATCC
49239]
Length = 243
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K DG++MA DM S G + K V++++ + L +G +S Q L+
Sbjct: 48 TGTTTVGIKTADGVVMATDMRASLGGMVSSKDVQKVEEVHPRGALTIAGSVSAAQNLIST 107
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E LY+ G + + L + ++ R F + +LGGV + ++ +
Sbjct: 108 LKAETSLYETRR--GKDMSMEALSTLTGNLL--RSGAFYIVQP--ILGGVDDEGSHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G E+ + TG G+ A +L E+ ++++ ++ + K ++ + RD ++ N +
Sbjct: 162 DALGGTTEEEYTVTGSGSQYALGVLEQEYDDDVTVDEAKTMAAKAIQSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
+A +T++G I++
Sbjct: 222 NVAVVTDDGVDITR 235
>gi|332159619|ref|YP_004424898.1| proteasome beta subunit [Pyrococcus sp. NA2]
gi|331035082|gb|AEC52894.1| proteasome beta subunit precursor [Pyrococcus sp. NA2]
Length = 204
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDG+++AAD S G+ + ++V +I I +H + +G++ D L+R L
Sbjct: 7 GTTTVGIVCKDGVVLAADRRASLGNIVYARNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 66
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY + G + + L + L ++ K+ P ++GG + L V
Sbjct: 67 RAEAKLYYAQF--GREMSARALATLLANILNGY--KYFPYMAWFLVGGYDEKAR-LYSVD 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
+G ED ++A G G A IL E+ ++++ ++GVKL K + + RD + + +
Sbjct: 122 AVGGITEDKYMAAGSGMEFAYSILDAEYSDDITVKEGVKLAVKAINTAIKRDVFSGDGIL 181
Query: 206 IAKITEEG 213
+ IT+EG
Sbjct: 182 VVTITKEG 189
>gi|15790018|ref|NP_279842.1| proteasome subunit alpha [Halobacterium sp. NRC-1]
gi|10580444|gb|AAG19322.1| proteasome, subunit alpha [Halobacterium sp. NRC-1]
Length = 255
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 98/193 (50%), Gaps = 10/193 (5%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGS-TIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
TGT++V L +DG+LMA+DM S G I K+V++++ I ++ L SG + Q +R
Sbjct: 59 TGTTIVGLTTQDGVLMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGAQSFIR 118
Query: 85 NL-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL-VLGGVKNGQKYLG 142
+L E LY+ G + L + + ++ + P + + +LGGV + ++
Sbjct: 119 SLRAEANLYEARR--GEYMSIDALSTMASNLL-----RGGPFFRVVPILGGVDDDGGHVF 171
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ G + D++ A G G A +L E+ E+L+ D ++ ++ RD ++ N
Sbjct: 172 SLDPAGSSMSDTYTAQGSGMPYALGVLEQEYSEDLTMADAEQVAAHAVKSASERDTASGN 231
Query: 203 KLQIAKITEEGTT 215
+ I KIT +G T
Sbjct: 232 GIHITKITHDGLT 244
>gi|408404298|ref|YP_006862281.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364894|gb|AFU58624.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 201
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 98/190 (51%), Gaps = 4/190 (2%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
++ G +VV + Y +G+++AA+ S+G+ + K++++ + H +G ++D Q L+
Sbjct: 5 FMPGATVVGISYNNGVILAAEKRVSFGNFVVNKNIKKTFSVTDHVGAACAGMVADMQVLV 64
Query: 84 RNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
R ++ L + + + P + ++ +M+ RR + PL +++GG+ N + +
Sbjct: 65 RQVEALAKIRKL-ETRRDVAPNSIAKLMSVIMFERR--YFPLLTQVIVGGI-NTKPEIYT 120
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+ +G D + A G G +A I+ E+ N++ E +L + +R + RD ++ +
Sbjct: 121 LDPLGSVLPDDYAAVGTGAEMALGIMDAEFKPNMTEEKAKELAVRAIRSAIQRDAASGDG 180
Query: 204 LQIAKITEEG 213
+ + ++ G
Sbjct: 181 IDVLVVSRTG 190
>gi|448562307|ref|ZP_21635346.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
gi|445719511|gb|ELZ71191.1| proteasome subunit beta [Haloferax prahovense DSM 18310]
Length = 243
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K ++G+++A DM S G + K V++++ I L +G +S Q L+ +
Sbjct: 48 TGTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISS 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E+ LY+ G + + L + + + R F + +LGGV ++ +
Sbjct: 108 LRAEVRLYEARR--GEDMSMQALSTLVGNFL--RSGGFYVVQP--ILGGVDETGPHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E+ + TG G+ A +L E+ + LS E+ ++ K +R + RD ++ N +
Sbjct: 162 DPAGSILEEEYTVTGSGSQYALGVLEQEFKDGLSIEEAKQVATKAIRSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
IA +TE+G I +
Sbjct: 222 NIAVVTEDGVDIQR 235
>gi|448609025|ref|ZP_21660304.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
gi|445747402|gb|ELZ98858.1| proteasome beta subunit [Haloferax mucosum ATCC BAA-1512]
Length = 243
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 100/194 (51%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K +G+++A DM S G + K V++++ + L +G +S Q L+ +
Sbjct: 48 TGTTTVGIKTDEGVVLATDMRASLGPMVSSKDVQKVEEVHPTGALTIAGSVSAAQSLISS 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E+ LY++ G + + L + + + R F + +LGGV + ++ +
Sbjct: 108 LRAEVRLYESRR--GEDMSMQALSTLVGNFL--RTGGFYIVQP--ILGGVDDDGAHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E+ + TG G+ A +L E+ ++LS ++ ++ K +R + RD ++ N +
Sbjct: 162 DPAGSILEEEYTVTGSGSQYALGVLEQEFSDDLSIDEAKQVATKAIRSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
IA +T+EG I +
Sbjct: 222 NIAVVTDEGVDIQR 235
>gi|337284212|ref|YP_004623686.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334900146|gb|AEH24414.1| proteasome beta subunit precursor [Pyrococcus yayanosii CH1]
Length = 204
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + +DG+++AAD S G+ + K+V +I I + + +G + D L+R L
Sbjct: 7 GTTTVGIVCRDGVVLAADRRASLGNMVYAKNVTKIYQIDERLAIAGAGNVGDILSLVRLL 66
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E+ LY + G S+ K L + L ++ R + P ++GG + + L V
Sbjct: 67 RAEVRLYRSRV--GRSMSAKALATLLANILNGTR--YFPYLVWFLVGGYDDAPR-LYSVD 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
M G ED +VA G G A IL ++ +S E+GVKL + + + RD +
Sbjct: 122 MAGGITEDKYVAAGSGMEFAFSILDSQYKPEMSVEEGVKLAVRAINSAIKRDVFTGEGIT 181
Query: 206 IAKITEEG 213
+ ITE+G
Sbjct: 182 VVTITEKG 189
>gi|14520958|ref|NP_126433.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|17380268|sp|Q9V0N9.1|PSB2_PYRAB RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|5458175|emb|CAB49664.1| psmB-like proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380741512|tpe|CCE70146.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 207
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + DG+++AAD S G+ + K+V +I I +H + +G++ D L+R L
Sbjct: 10 GTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGDILNLVRLL 69
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY G + K L + L ++ R P ++GG + L V
Sbjct: 70 RAEAKLY--YAQSGKRMSVKALATLLANMLNGAR--MLPYLAWFLVGGFDEKPR-LYSVD 124
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
M+G ED +VA G G A +L E+ E+L +G+K+ + + + RD + + +
Sbjct: 125 MMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSGDGIM 184
Query: 206 IAKITEEG 213
+ ITEEG
Sbjct: 185 VVTITEEG 192
>gi|389851755|ref|YP_006353989.1| proteasome subunit beta [Pyrococcus sp. ST04]
gi|388249061|gb|AFK21914.1| proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 197
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K KDG+++AAD S + ++ +I PI + +G + D Q L R
Sbjct: 5 TGTTTVGIKVKDGVVLAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQVLARI 64
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L+ E Y W G + K + + L+ ++ +K+ P +++GG + +
Sbjct: 65 LEAEARYYYFTW--GRPMSTKAMANLLSNIL--NEHKWFPYLVQIIIGGYVDEPTIANLD 120
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNK 203
G+ F+D + ATG G A +L + + +NL E +L K +R RD + K
Sbjct: 121 PFGGLIFDD-YTATGSGTPFAIAVLEEGYRKNLGIEKAKELAIKAVRAAGKRDVYTGSKK 179
Query: 204 LQIAKITEEG 213
+Q+ IT+EG
Sbjct: 180 VQVVTITKEG 189
>gi|448729602|ref|ZP_21711917.1| proteasome subunit beta [Halococcus saccharolyticus DSM 5350]
gi|445794904|gb|EMA45442.1| proteasome subunit beta [Halococcus saccharolyticus DSM 5350]
Length = 232
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 95/192 (49%), Gaps = 7/192 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V L + G+++AADM S G+ + K ++ + + L +G +S Q L+ +
Sbjct: 37 TGTTTVGLTAEGGVVLAADMRASAGNMVASKDARKVLEVHPTAALTIAGSVSAAQSLVNS 96
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E+ LY+ D G SL E + LT + R F + VLGGV + ++ +
Sbjct: 97 LQAEVRLYETRRDTGMSL---EALANLTANLL-RSGNFHIVQP--VLGGVDDDGSHVYSI 150
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + + +G G+ A +L E+ E +S +D + + ++ RD ++ N L
Sbjct: 151 GPGGSVMAEDYAVSGSGSPFALGVLEQEYDEGMSVDDAETIAARAVQSATERDTASGNGL 210
Query: 205 QIAKITEEGTTI 216
+A IT +G TI
Sbjct: 211 TLATITADGVTI 222
>gi|15920523|ref|NP_376192.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574822|sp|Q975U8.1|PSB1_SULTO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|15621306|dbj|BAB65301.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
Length = 197
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 100/188 (53%), Gaps = 4/188 (2%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
+ + +K DGI++AA+ SYG + +S +++ IG+ + GA G + D Q L R ++
Sbjct: 6 ATALGIKLNDGIILAAERRLSYGGFVLSRSAKKVFKIGRFGIAGA-GIMGDIQTLTRLMN 64
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
I Y M+++ + K L+ ++Y + K+ P + L+ GGV + L ++ I
Sbjct: 65 VEIKYYEMYNN-KPISVKAAAKLLSVILY--QYKWTPFISELLFGGVDDEGPKLFVLDPI 121
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G ED++ A G G +A +L E+ +++ + G +++ K ++ + RD ++ + + I
Sbjct: 122 GSLIEDNYAAVGSGARVAIGVLESEYDPSMNLDKGKEIVLKALKAAIERDVTSGDGIDIL 181
Query: 208 KITEEGTT 215
I + T+
Sbjct: 182 TIKRDNTS 189
>gi|336477060|ref|YP_004616201.1| proteasome endopeptidase complex subunit beta [Methanosalsum
zhilinae DSM 4017]
gi|335930441|gb|AEH60982.1| proteasome endopeptidase complex, beta subunit [Methanosalsum
zhilinae DSM 4017]
Length = 210
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 103/191 (53%), Gaps = 6/191 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V + +DG+++A + + G+ I K+ ++I I L +G + D Q+++
Sbjct: 6 YLKGTTTVGIVCRDGVVLATEKRATMGNLIASKTAKKIYQIDDLVGLTTAGSVGDAQQIV 65
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYL 141
R + E LY + ++ K + + L+ ++ +R + PL L++GGV K G
Sbjct: 66 RLISVESRLYKMRRQE--TMTIKGITTLLSNLLSGQR--YYPLMVQLLIGGVDKKGPNLY 121
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ ++ G+ E + VATG G+ +A +L D +H ++S E+G L + + + RD ++
Sbjct: 122 SLDALGGMIEETNAVATGSGSPIAYGVLEDRYHTDMSIEEGADLAIRALHNAMKRDSASG 181
Query: 202 NKLQIAKITEE 212
N + + IT+E
Sbjct: 182 NGIDVVCITDE 192
>gi|448488453|ref|ZP_21607289.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
gi|445696143|gb|ELZ48236.1| 20S proteasome A and B subunits [Halorubrum californiensis DSM
19288]
Length = 243
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K DG++MA DM S G + K V++++ I L +G +S Q L+
Sbjct: 48 TGTTTVGIKADDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E LY+ G + + L + ++ R F +LGGV + ++ +
Sbjct: 108 LRAETSLYEARR--GKDMSMEALSTLTGNLL--RSGAF--YIVQPILGGVDDEGAHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G E+ + TG G+ A +L E+ ++++ ++ + K ++ + RD ++ N +
Sbjct: 162 DALGGTTEEEYTVTGSGSQYALGVLEQEYDDDVTIDEAKNIAAKAIQSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
+A +T++G I++
Sbjct: 222 NVAVVTDDGVDITR 235
>gi|41614998|ref|NP_963496.1| hypothetical protein NEQ203 [Nanoarchaeum equitans Kin4-M]
gi|74579825|sp|Q74MP5.1|PSB_NANEQ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|40068722|gb|AAR39057.1| NEQ203 [Nanoarchaeum equitans Kin4-M]
Length = 196
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 102/191 (53%), Gaps = 9/191 (4%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
T+++ +K +DG+++A+D S G+ + K ++I PI + LL SG ++D Q + + L
Sbjct: 2 TTIIGIKARDGVVLASDKQASMGNIVEDKRAQKIIPITDYILLAGSGTVADLQHIAKILK 61
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
+ ++ ++ E + L+ ++Y R +PL L++ G N +++ G+ S+
Sbjct: 62 TELKLRELYSR-RTMNVIEAANLLSHLLYQNRFYLNPL--GLLIAGPINSKEF-GIYSLD 117
Query: 148 GV----NFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
G+ +D + A G G +A L E++ +++ D +KL EK ++ + RD +
Sbjct: 118 GIGAISEIKD-YFAEGSGGVIALGTLEAEYNPDITVRDAIKLAEKALKSSIARDVFSGYG 176
Query: 204 LQIAKITEEGT 214
++I IT++G
Sbjct: 177 IEIYTITKKGV 187
>gi|333910183|ref|YP_004483916.1| proteasome subunit beta [Methanotorris igneus Kol 5]
gi|333750772|gb|AEF95851.1| proteasome endopeptidase complex, beta subunit [Methanotorris
igneus Kol 5]
Length = 216
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 7/196 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V L D +++A D + G+ I K +++ I + + +G + D Q L+
Sbjct: 7 YMKGTTTVGLICDDAVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALV 66
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKY 140
R + E LY G ++ P + ++ +++ N+ P L++GG + G +
Sbjct: 67 RYVSAEAKLYK--MRTGKNIPPLSCATLISNILHG--NRMFPFLTQLIIGGYDLLYGPRL 122
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
+ + G+N E S ATG G+ A IL E+ ++++ +DG+ L K + + RD +
Sbjct: 123 FSLDPIGGLNEESSFTATGSGSPTAYGILELEYSKDMTLKDGLNLAIKALISAMERDAFS 182
Query: 201 VNKLQIAKITEEGTTI 216
N + +A + +EG TI
Sbjct: 183 GNGISLAYVNKEGVTI 198
>gi|448530967|ref|ZP_21620801.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
gi|445707407|gb|ELZ59261.1| 20S proteasome A and B subunits [Halorubrum hochstenium ATCC
700873]
Length = 243
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K +DG++MA DM S G + K V++++ I L +G +S Q L+
Sbjct: 48 TGTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E LY+ G + + L + ++ R F + +LGGV + ++ +
Sbjct: 108 LRAETSLYEARR--GKDMSMEALSTLTGNLL--RSGAFYIVQP--ILGGVDDEGAHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G E+ + TG G+ A +L E+ + ++ ++ + K ++ + RD ++ N +
Sbjct: 162 DALGGTTEEEYTVTGSGSQYALGVLEQEYDDGVTIDEAKTIAAKAIQSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
+A +T++G I++
Sbjct: 222 NVAVVTDDGVDITR 235
>gi|448435232|ref|ZP_21586709.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
gi|445684056|gb|ELZ36442.1| 20S proteasome A and B subunits [Halorubrum tebenquichense DSM
14210]
Length = 243
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 98/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K +DG++MA DM S G + K V++++ I L +G +S Q L+
Sbjct: 48 TGTTTVGIKAEDGVVMATDMRASLGGMVSSKDVQKVEEIHPRGALTIAGSVSAAQNLIST 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E LY+ G + + L + ++ R F + +LGGV + ++ +
Sbjct: 108 LRAETSLYEARR--GKDMSMEALSTLTGNLL--RSGAFYIVQP--ILGGVDDEGAHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G E+ + TG G+ A +L E+ + ++ ++ + K ++ + RD ++ N +
Sbjct: 162 DALGGTTEEEYTVTGSGSQYALGVLEQEYDDGVTIDEAKTIAAKAIQSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
+A +T++G I++
Sbjct: 222 NVAVVTDDGVDITR 235
>gi|386875364|ref|ZP_10117538.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
gi|386806763|gb|EIJ66208.1| proteasome endopeptidase complex, beta subunit [Candidatus
Nitrosopumilus salaria BD31]
Length = 210
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 99/189 (52%), Gaps = 7/189 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K KDG+++ ADM S G I + +I+ I H+ L +G ++D Q N+
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDLHAGLTLAGGVADAQ----NI 67
Query: 87 DELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+++ Y + GP +HS L +++++ N+ P +++GG L +
Sbjct: 68 VDILRYHSNLHRVEKQGPISIHSLARLCSLIFHQ-NRGYPFMADILVGGFDANGPALFNI 126
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
M G E S+V TG G+ +A +L +E+ ++L+ E+ K+ + ++ + R+ + +
Sbjct: 127 DMFGSVEEKSYVTTGSGSPVAYGLLEEEYKKDLTVEEAKKIALRAVKAAIVRNIGTGDGI 186
Query: 205 QIAKITEEG 213
IA + ++G
Sbjct: 187 NIAVMDKDG 195
>gi|289192182|ref|YP_003458123.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
gi|302595757|sp|D3S8M7.1|PSB_METSF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288938632|gb|ADC69387.1| proteasome endopeptidase complex, beta subunit [Methanocaldococcus
sp. FS406-22]
Length = 224
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L D +++A D S G+ + K +++ I + + +G + D Q ++R L
Sbjct: 6 GTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLL 65
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGM 143
E LY G ++ P + L+ ++++ R P +++GG + G K +
Sbjct: 66 TAEAKLYK--MRTGRNIPPLACATLLSNILHSSR--VFPFLTQIIIGGYDLLEGAKLFSL 121
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+ G+N E + ATG G+ +A +L + +S E+G+KL ++ + RD + N
Sbjct: 122 DPLGGMNEEKTFTATGSGSPIAYGVLEAGYDREMSVEEGIKLAINALKSAMERDTFSGNG 181
Query: 204 LQIAKITEEGTTI 216
+ +A IT+EG I
Sbjct: 182 ISLAVITKEGVKI 194
>gi|14520445|ref|NP_125920.1| proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|74558522|sp|Q9V247.1|PSB1_PYRAB RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|5457660|emb|CAB49151.1| psmB proteasome, subunit beta [Pyrococcus abyssi GE5]
gi|380740969|tpe|CCE69603.1| TPA: proteasome, subunit beta [Pyrococcus abyssi GE5]
Length = 197
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 94/190 (49%), Gaps = 7/190 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V ++ KDG+++AAD S + ++ +I PI + +G + D Q + R
Sbjct: 5 TGTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARI 64
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L+ E Y W G + + + + L+ ++ NK+ P +++GG + +
Sbjct: 65 LEAEARYYQFTW--GRPMTTRAMANLLSNIL--NENKWFPYLVQIIIGGYVDEPTIANLD 120
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNK 203
+ G+ F+D + ATG G A IL + + +NL E +L K ++ RD + K
Sbjct: 121 PLGGLIFDD-YTATGSGTPFAIAILEEGYRKNLGIEKAKELAIKAVKAAGARDVYTGSKK 179
Query: 204 LQIAKITEEG 213
+Q+ IT++G
Sbjct: 180 IQVVTITKDG 189
>gi|448540830|ref|ZP_21623751.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|448549222|ref|ZP_21627911.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|448555580|ref|ZP_21631620.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
gi|445708983|gb|ELZ60818.1| proteasome subunit beta [Haloferax sp. ATCC BAA-646]
gi|445713285|gb|ELZ65063.1| proteasome subunit beta [Haloferax sp. ATCC BAA-645]
gi|445718325|gb|ELZ70028.1| proteasome subunit beta [Haloferax sp. ATCC BAA-644]
Length = 243
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K ++G+++A DM S G + K V++++ I L +G +S Q L+ +
Sbjct: 48 TGTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISS 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E+ LY+ G + + L + + + R F + +LGGV ++ +
Sbjct: 108 LRAEVRLYEARR--GEDMSMQALSTLVGNFL--RSGGFYVVQP--ILGGVDETGPHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E+ + TG G+ A +L E+ + LS E+ + K +R + RD ++ N +
Sbjct: 162 DPAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
IA +TE+G I +
Sbjct: 222 NIAVVTEDGVDIQR 235
>gi|407463311|ref|YP_006774628.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
gi|407046933|gb|AFS81686.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
koreensis AR1]
Length = 210
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 99/189 (52%), Gaps = 7/189 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K KDG+++ ADM S G I + +I+ I H+ L +G ++D Q N+
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQ----NI 67
Query: 87 DELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+++ Y + GP +HS L +++++ N+ P +++GG L +
Sbjct: 68 VDILRYHSNLHRVEKHGPISIHSLARLCSLIFHQ-NRGYPFMADILVGGYDTEGPALFNI 126
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
M G + S+V TG G+ +A +L +E+ E+L+ E+ K+ + ++ + R+ + +
Sbjct: 127 DMFGSVEKKSYVTTGSGSPVAYGLLEEEYKEDLTVEEAKKIALRAVKAAIVRNIGTGDGI 186
Query: 205 QIAKITEEG 213
IA + ++G
Sbjct: 187 NIAVMDKDG 195
>gi|292655712|ref|YP_003535609.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|433422417|ref|ZP_20405977.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|448289696|ref|ZP_21480860.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|448570967|ref|ZP_21639478.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|448595863|ref|ZP_21653310.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
gi|306755975|sp|D4GYZ1.1|PSB_HALVD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|5833210|gb|AAD53406.1|AF126262_1 beta-1 subunit of 20S proteasome [Haloferax volcanii DS2]
gi|291370914|gb|ADE03141.1| proteasome beta subunit [Haloferax volcanii DS2]
gi|432198645|gb|ELK54905.1| proteasome subunit beta [Haloferax sp. BAB2207]
gi|445581429|gb|ELY35787.1| proteasome subunit beta [Haloferax volcanii DS2]
gi|445722885|gb|ELZ74536.1| proteasome subunit beta [Haloferax lucentense DSM 14919]
gi|445742317|gb|ELZ93812.1| proteasome subunit beta [Haloferax alexandrinus JCM 10717]
Length = 243
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 97/194 (50%), Gaps = 7/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V +K ++G+++A DM S G + K V++++ I L +G +S Q L+ +
Sbjct: 48 TGTTTVGIKTEEGVVLATDMRASMGYMVSSKDVQKVEEIHPTGALTIAGSVSAAQSLISS 107
Query: 86 L-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E+ LY+ G + + L + + + R F + +LGGV ++ +
Sbjct: 108 LRAEVRLYEARR--GEDMSMQALSTLVGNFL--RSGGFYVVQP--ILGGVDETGPHIYSI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E+ + TG G+ A +L E+ + LS E+ + K +R + RD ++ N +
Sbjct: 162 DPAGSILEEEYTVTGSGSQYALGVLEQEFEDGLSIEEAKGVATKAIRSAVERDLASGNGI 221
Query: 205 QIAKITEEGTTISQ 218
IA +TE+G I +
Sbjct: 222 NIAVVTEDGVDIQR 235
>gi|355571914|ref|ZP_09043122.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
gi|354825010|gb|EHF09245.1| proteasome endopeptidase complex, beta subunit [Methanolinea tarda
NOBI-1]
Length = 213
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 99/190 (52%), Gaps = 6/190 (3%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+TGT+ V L +D +++A++M + G I K ++I I + +G + D Q++ R
Sbjct: 9 MTGTTTVGLVLRDAVVLASEMRATMGYLIASKKAKKIYQIADRIGMTTAGGVGDAQQIAR 68
Query: 85 NLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLG 142
+ E LY G + + + L+ ++ N++ P + L++GGV + G K
Sbjct: 69 LMTVECSLYQ--IRRGRPITIGAVATLLSNIL--NANRYYPFYVQLLVGGVDEGGPKLYA 124
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ ++ G + E+ VATG G+ +A +L D + ++LS ++ V L + +R + RD +
Sbjct: 125 VDALGGASREEEMVATGSGSPMAFGVLEDRYSKDLSEDEAVALAVRAIRSAMKRDAGSGE 184
Query: 203 KLQIAKITEE 212
+ + IT+E
Sbjct: 185 GIHVVVITKE 194
>gi|408382617|ref|ZP_11180160.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
gi|407814693|gb|EKF85317.1| proteasome subunit beta [Methanobacterium formicicum DSM 3637]
Length = 208
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 97/188 (51%), Gaps = 5/188 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L KDG++ A + + G+ + +K ++I I H +G +SD Q L++ +
Sbjct: 9 GTTTVGLTCKDGVVFATETRATMGNLVAHKVADKIFKIDDHIGTTIAGAVSDAQSLMKYI 68
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E+ L+ +G + + + + ++++ R P + +LGGV + L +
Sbjct: 69 RAEVALF--RLRNGKRINVEAAATLTSNILHSSRGY--PFYVQTLLGGVDDKGPALYSLD 124
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G +D ++TG G+ +A +L D + ++L E+G+ + + ++ + RD + N +
Sbjct: 125 PTGGVIKDLVISTGSGSPVAYGVLEDRYSQDLYVEEGIDVAIRAIKSAMERDTYSGNSIL 184
Query: 206 IAKITEEG 213
+A ITEEG
Sbjct: 185 VATITEEG 192
>gi|197129683|gb|ACH46181.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
Length = 229
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 52/74 (70%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P RT P VTGTSV+ LK+ G+++AAD GSYGS R++ + R+ + ++LGASG+
Sbjct: 41 PAGRTLSPMVTGTSVLGLKFSGGVMLAADTVGSYGSLARFRGISRLLKVNDSTVLGASGD 100
Query: 76 ISDFQELLRNLDEL 89
++DFQ L + L+++
Sbjct: 101 LADFQHLRQLLEQM 114
>gi|242398879|ref|YP_002994303.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
gi|302595703|sp|C6A2V9.1|PSB1_THESM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|242265272|gb|ACS89954.1| Proteasome subunit beta precursor [Thermococcus sibiricus MM 739]
Length = 207
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 6/193 (3%)
Query: 22 LPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQE 81
L + GT+ V + KDG+++ AD S G+ + K V +I + H L +G + D
Sbjct: 4 LDKIKGTTTVGIVCKDGVVLTADRRASLGNMVISKGVTKIFQVDDHLALAGAGAVGDILS 63
Query: 82 LLRNL-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKY 140
L+R L E LY G + K L + + ++ R K+ P + ++GG + +
Sbjct: 64 LVRALRAESKLYRAKV--GKEMSTKALATLTSNILSGR--KYLPYFGWFLIGGY-DEKPS 118
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
L + M G ED +V+ G G A IL +E+ E ++ +GVKL K + + RD
Sbjct: 119 LYSIDMAGGITEDKYVSAGSGMEFAYSILDNEYSEKITLNNGVKLAIKAINAAIKRDVFT 178
Query: 201 VNKLQIAKITEEG 213
+ + + I EG
Sbjct: 179 GDGIMVVTIDREG 191
>gi|124485835|ref|YP_001030451.1| hypothetical protein Mlab_1015 [Methanocorpusculum labreanum Z]
gi|302595748|sp|A2SS78.1|PSB_METLZ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|124363376|gb|ABN07184.1| Proteasome endopeptidase complex [Methanocorpusculum labreanum Z]
Length = 212
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 97/191 (50%), Gaps = 10/191 (5%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V + + G+++A + + G+ I K +++ I + +G + D Q+L+R
Sbjct: 10 TGTTTVGIVFDGGVILATERRATMGNLIASKKAKKVHAITDKIGMTIAGGVGDAQQLVRI 69
Query: 86 LD-ELILYDNMWDDGNSLGPKE--LHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYL 141
++ E LY+ S+G L +YL +N+F P + L++GGV +G
Sbjct: 70 INVECNLYEIRRGQKISVGAAATILSNYL------NQNRFSPYYVQLLVGGVDTSGPSVY 123
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ + G E++ V+TG G+ A +L D + N++ E+ ++L + +R + RD ++
Sbjct: 124 SVDAAGGATLEENFVSTGSGSLTAYGVLEDRFKPNMTEEEAIELAVRALRAAMLRDSASG 183
Query: 202 NKLQIAKITEE 212
+ IT+E
Sbjct: 184 EGYNVVIITQE 194
>gi|150400488|ref|YP_001324254.1| proteasome endopeptidase complex protein [Methanococcus aeolicus
Nankai-3]
gi|302595768|sp|A6UT20.1|PSB_META3 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|150013191|gb|ABR55642.1| Proteasome endopeptidase complex [Methanococcus aeolicus Nankai-3]
Length = 217
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 97/196 (49%), Gaps = 7/196 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V + DGI++A D + G+ I K +++ I + + +G + D Q L+
Sbjct: 11 YMKGTTTVGIVCNDGIVLATDKRATMGNLIADKEAKKLYKIDDYMAMTIAGSVGDAQSLV 70
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK--NGQKY 140
R + E LY GN++ P L+ V++ R+ P L++GG +G K
Sbjct: 71 RIISAEANLYK--LRTGNNIPPHSCAMLLSNVLHGSRHF--PFLIQLIIGGYDTIHGAKL 126
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
+ ++ G+N E S ATG G+ A +L +E+ ++++ G L K + + RD +
Sbjct: 127 FSLDAVGGLNEETSFTATGSGSPTAFGVLEEEYKKDMTINKGKLLAIKSLTAAMKRDAFS 186
Query: 201 VNKLQIAKITEEGTTI 216
N + +A I + G I
Sbjct: 187 GNGISLAVIDKNGVKI 202
>gi|332158405|ref|YP_004423684.1| proteasome subunit beta [Pyrococcus sp. NA2]
gi|331033868|gb|AEC51680.1| proteasome, subunit beta [Pyrococcus sp. NA2]
Length = 216
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 92/190 (48%), Gaps = 7/190 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V ++ KDG+++AAD S + ++ +I PI + +G + D Q + R
Sbjct: 24 TGTTTVGIRVKDGVILAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMIARI 83
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L+ E Y W G + K + + L+ ++ N++ P +++GG +
Sbjct: 84 LEAEARYYQFTW--GRPMSTKAMANLLSNIL--NENRWFPYLVQIIIGGYVEEPTIANLD 139
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNK 203
+ G+ FED + ATG G A IL + + +NL E L K ++ RD + K
Sbjct: 140 PLGGLIFED-YTATGSGTPFALAILEEGYRKNLGIEKAKDLAIKAIKAAGSRDVYTGSKK 198
Query: 204 LQIAKITEEG 213
+Q+ IT++G
Sbjct: 199 VQVMTITKDG 208
>gi|17380265|sp|Q9P992.1|PSB_METTE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|790625|gb|AAA91642.1| beta-type proteasome subunit [Methanosarcina thermophila TM-1]
Length = 210
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 105/203 (51%), Gaps = 6/203 (2%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V + DGI++A++ + G I K+ +++ I + +G + D Q+L+
Sbjct: 6 YLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLV 65
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYL 141
R + E LY D+ S+ K + + ++ + RN++ P+ L++GGV KNG
Sbjct: 66 RLVSVESQLYKMRRDE--SMTIKGITTLMSNFL--SRNRYYPMMVQLLIGGVDKNGPGIY 121
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ +M G E ATG G+ +A +L D++ EN++ ++G+ L + + RD ++
Sbjct: 122 SLDAMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASG 181
Query: 202 NKLQIAKITEEGTTISQPYALKT 224
+ + IT+E P +K+
Sbjct: 182 ENIDVVVITKEAFKRLDPEEVKS 204
>gi|414880843|tpg|DAA57974.1| TPA: hypothetical protein ZEAMMB73_877854 [Zea mays]
Length = 370
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 42/58 (72%)
Query: 68 SLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPL 125
+L ASGE+SDFQELLR L EL D+ WDD N + K ++ YLTRVMY RR+K DPL
Sbjct: 312 ALSRASGELSDFQELLRYLYELTFSDHKWDDANYMEAKHINKYLTRVMYIRRDKSDPL 369
>gi|340345703|ref|ZP_08668835.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
gi|339520844|gb|EGP94567.1| Proteasome endopeptidase complex [Candidatus Nitrosoarchaeum
koreensis MY1]
Length = 210
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 98/189 (51%), Gaps = 7/189 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K KDG+++ ADM S G I + +I+ I H+ L +G ++D Q N+
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDAHAGLTLAGGVADAQ----NI 67
Query: 87 DELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+++ Y + GP +HS L ++++ +N+ P +++GG L +
Sbjct: 68 VDILRYHSNLHRVEKQGPISIHSLARLCSLIFH-QNRGYPFMADILVGGYDANGPALFNI 126
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
M G + S+V TG G+ +A +L +E+ +L+ E+ K+ + ++ + R+ + +
Sbjct: 127 DMFGSVEQKSYVTTGSGSPVAYGLLEEEYRSDLTVEEAKKIALRAVKAAIVRNIGTGDGI 186
Query: 205 QIAKITEEG 213
IA + ++G
Sbjct: 187 NIAVMDKDG 195
>gi|15669422|ref|NP_248232.1| proteasome subunit beta PsmB [Methanocaldococcus jannaschii DSM
2661]
gi|2499838|sp|Q58634.1|PSB_METJA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1591869|gb|AAB99241.1| proteasome, subunit beta (psmB) [Methanocaldococcus jannaschii DSM
2661]
Length = 224
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 99/198 (50%), Gaps = 7/198 (3%)
Query: 22 LPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQE 81
+ + GT+ V L D +++A D S G+ + K +++ I + + +G + D Q
Sbjct: 1 MDVMKGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQA 60
Query: 82 LLRNL-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQ 138
++R L E LY G ++ P + L+ ++++ R P +++GG + G
Sbjct: 61 IVRLLIAEAKLYK--MRTGRNIPPLACATLLSNILHSSR--MFPFLTQIIIGGYDLLEGA 116
Query: 139 KYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDR 198
K + + G+N E + ATG G+ +A +L + ++S E+G+KL ++ + RD
Sbjct: 117 KLFSLDPLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDT 176
Query: 199 SAVNKLQIAKITEEGTTI 216
+ N + +A IT++G I
Sbjct: 177 FSGNGISLAVITKDGVKI 194
>gi|337285369|ref|YP_004624843.1| proteasome subunit beta [Pyrococcus yayanosii CH1]
gi|334901303|gb|AEH25571.1| proteasome, subunit beta [Pyrococcus yayanosii CH1]
Length = 197
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 7/190 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V ++ +G+++AAD S + ++ +I PI + +G + D Q L R
Sbjct: 5 TGTTTVGIRVDEGVVLAADTQASLDHMVETLNIRKIIPITDRIAITTAGSVGDVQMLARI 64
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L+ E Y W G + + + + L+ ++ NK+ P +V+GG +
Sbjct: 65 LEVEARYYQFTW--GRPMSTRAMANLLSNIL--NENKWFPYLVQIVIGGYVEEPVIANLD 120
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNK 203
+ G+ F+D + ATG G+ A +L D + +++ E+ +L K ++V RD + K
Sbjct: 121 PLGGLIFDD-YTATGSGSPFAIAVLEDGYRKDMGIEEAKELAVKAVKVAGKRDVYTGSRK 179
Query: 204 LQIAKITEEG 213
+Q+ IT+EG
Sbjct: 180 VQVVTITKEG 189
>gi|393794893|ref|ZP_10378257.1| proteasome endopeptidase complex protein [Candidatus
Nitrosoarchaeum limnia BG20]
Length = 210
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 99/189 (52%), Gaps = 7/189 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K KDG+++ ADM S G I + +I+ I +H+ L +G ++D Q N+
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDEHAGLTLAGGVADAQ----NI 67
Query: 87 DELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+++ Y + GP +HS L ++++ +N+ P +++GG L +
Sbjct: 68 VDILRYHSNLHRVEKQGPISIHSLARLCSLIFH-QNRGYPFMADILVGGYDANGPALFNI 126
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
M G + S+V TG G+ +A +L +E+ +L+ E+ K+ + ++ + R+ + +
Sbjct: 127 DMFGSVEKKSYVTTGSGSPVAYGLLEEEYRPDLTVEEAKKIALRAVKAAIVRNIGTGDGI 186
Query: 205 QIAKITEEG 213
IA + ++G
Sbjct: 187 NIAVMDKDG 195
>gi|146304800|ref|YP_001192116.1| proteasome endopeptidase complex protein [Metallosphaera sedula DSM
5348]
gi|302595852|sp|A4YIE0.1|PSB1_METS5 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|145703050|gb|ABP96192.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Metallosphaera sedula DSM
5348]
Length = 217
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 4/196 (2%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
+ ++ + GT+ V L KD +++AAD S G + K V +I I + +G ++
Sbjct: 12 SKDKIKILKGTTTVGLVVKDAVILAADRRASAGFFVANKMVRKIVYIDDRIGMTTAGSVA 71
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
D Q + N + I + N+ + K L +YLT ++ +NK+ P +++GG +
Sbjct: 72 DLQ-FIYNYMKNIYHYNLISGNRPVTVKSLATYLTNIL--SQNKYFPYLVQILMGGY-DT 127
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
Q L + +G E+++VATG G+ +A +L D + +L+ + + L + + + RD
Sbjct: 128 QPRLFNLDYLGDMTEETYVATGSGSPVAMGVLEDGYSPDLTGDQAMDLAARAVMSAIKRD 187
Query: 198 RSAVNKLQIAKITEEG 213
+ + KIT+EG
Sbjct: 188 SFTGTGVIVTKITKEG 203
>gi|119719224|ref|YP_919719.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595702|sp|A1RWY6.1|PSB1_THEPD RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119524344|gb|ABL77716.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 200
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 94/189 (49%), Gaps = 8/189 (4%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L KD +++AAD + G I K +I I H +G + D Q+L+ L
Sbjct: 12 GTTTVGLVGKDFVVLAADRRATAGYFIANKQTWKIVEIDSHIAATIAGTVGDAQQLVDRL 71
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN-SLVLGGVKNGQKYLGMV 144
E Y + G+S+ K + + + +++ R P+ + +++GGV + L V
Sbjct: 72 RVEARYYKTI--TGDSMPVKSVATLASLILFQYR----PILSVQMLIGGVDSDGPSLFSV 125
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G + + ATG G+ A +L E+ E+LS E+ V L K + + L RD + +
Sbjct: 126 DWLGTVTREKYTATGSGSPYAVSLLEHEYREDLSLEEAVNLAVKAVNIALARDPGSGEGV 185
Query: 205 QIAKITEEG 213
IA IT+EG
Sbjct: 186 DIATITKEG 194
>gi|312136619|ref|YP_004003956.1| proteasome endopeptidase complex subunit beta [Methanothermus
fervidus DSM 2088]
gi|311224338|gb|ADP77194.1| proteasome endopeptidase complex, beta component [Methanothermus
fervidus DSM 2088]
Length = 211
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 95/187 (50%), Gaps = 5/187 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDGI+ A++ + G+ I +K+V++I I +H +G + D Q+L+ L
Sbjct: 9 GTTTVGIVCKDGIVFASEKRATLGNLIAHKAVDKIFKIDEHLATTVAGSVGDAQKLVEYL 68
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E+ LY G + S + +++ R P +++GG+ + V
Sbjct: 69 KAEVRLYK--LRTGKPATVRAAASIASNILHASR--MFPFIVQMLIGGIDETGPKIYSVD 124
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G ED +V+TG G+ +A +L D + +++S ED + + + ++ RD + + +
Sbjct: 125 PAGGKIEDKYVSTGSGSPIAYGVLEDRYKKDMSVEDAINIALRAIKSSTKRDTFSGDGIS 184
Query: 206 IAKITEE 212
+A +TE+
Sbjct: 185 LAVVTEK 191
>gi|395645475|ref|ZP_10433335.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
gi|395442215|gb|EJG06972.1| proteasome endopeptidase complex, beta subunit [Methanofollis
liminatans DSM 4140]
Length = 212
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 96/190 (50%), Gaps = 10/190 (5%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L + +GI++A + + G+ I K+ +++ I + +G + D Q L R +
Sbjct: 11 GTTTVGLVFDEGIVLATEKRATMGTLIASKTAKKVYQIADRIGMTTAGGVGDAQSLARLM 70
Query: 87 D-ELILYDNMWDDGNSLGPKE--LHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLG 142
E LY S+G L +YL ++N++ P + L++GGV +NG
Sbjct: 71 QVECSLYKVRHGKPISVGAAATLLSNYL------QQNRYYPYYVQLLVGGVDRNGPSVYS 124
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ +M G + E V+TG G+ +A +L D +H +++ + V L + ++ + RD ++
Sbjct: 125 VDAMGGASKETDIVSTGSGSPMAYGVLEDRYHADMNEPEAVDLATRSLKAAMRRDSASGE 184
Query: 203 KLQIAKITEE 212
+ I IT +
Sbjct: 185 NISIVVITRD 194
>gi|410672077|ref|YP_006924448.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
gi|409171205|gb|AFV25080.1| proteasome endopeptidase complex [Methanolobus psychrophilus R15]
Length = 210
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 102/195 (52%), Gaps = 6/195 (3%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
T Y+ GT+ V + DG++MA + + G I K+ ++I I + + +G + D
Sbjct: 2 TDDKYLKGTTTVGIVCSDGVVMATEQRATMGHLIASKTAKKIYQIDDFAAMTTAGSVGDA 61
Query: 80 QELLRNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ 138
Q+++R + E LY + S+ K L + L+ ++ +R + PL L++GG
Sbjct: 62 QQIVRIISVESKLYKMRRKE--SMTIKGLTTMLSNLLSGQR--YYPLMVQLLVGGYDKHG 117
Query: 139 KYLGMVSMIGVNFEDSHV-ATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
L + +G N ++ V ATG G+ +A +L D + EN++ ++GV+L + + + RD
Sbjct: 118 PELYSIDALGGNIDEKRVVATGSGSPIAYGVLEDRYKENMTTQEGVELAVRALHNAMKRD 177
Query: 198 RSAVNKLQIAKITEE 212
++ + + + IT++
Sbjct: 178 SASGDGIDVVIITKD 192
>gi|385806007|ref|YP_005842405.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
gi|383795870|gb|AFH42953.1| proteasome subunit Beta [Fervidicoccus fontis Kam940]
Length = 211
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 92/187 (49%), Gaps = 4/187 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L KD +++AAD + G+ I ++ +I I L +G ++D Q L L
Sbjct: 19 GTTTVGLIAKDAVILAADRRATAGTFIAHRKTRKILKITDKMALTTAGLVADAQVLADWL 78
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
+ + Y + + +E L+ ++Y R K P + L+LGG + + +
Sbjct: 79 NTQMNYLTITKK-QPVTVREAAHLLSLLLY--RYKLFPFYVQLILGGYDTAPRLFSL-DL 134
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
G E+ + +TG G+ +A +L D + EN+S E+ KL K +++ L RD + + +
Sbjct: 135 YGSLVEEKYTSTGSGSPIAIGVLEDGYRENMSPEEARKLAVKAVQMALKRDSATGDGVDS 194
Query: 207 AKITEEG 213
IT EG
Sbjct: 195 VIITSEG 201
>gi|118431089|ref|NP_147297.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
gi|121732295|sp|Q9YER0.2|PSB2_AERPE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|116062415|dbj|BAA79486.2| proteasome beta subunit precursor [Aeropyrum pernix K1]
Length = 219
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 99/190 (52%), Gaps = 8/190 (4%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
+GT+ V L D +++AAD + G I + V++I + + + SG ++D Q L
Sbjct: 24 SGTTTVGLIASDHVILAADKRATAGFLIASRRVKKIVMLSNYVAMTVSGLVADAQILSDV 83
Query: 86 LDELILYDNMWDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
L E I +++ N + P + + S L+ ++++ +KF P L++GG + Q L
Sbjct: 84 LREEI---RLYEMTNKVKPSVRFVASLLSNILFS--SKFFPYIVQLIVGG-YDTQPRLYT 137
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+ + G ED + ATG G+ +A +L + + E+LS E+ +K+ +R + RD ++ +
Sbjct: 138 LDLFGSITEDKYTATGSGSPIAYGVLEERYREDLSVEEAIKVATTAIRSAVLRDAASGDG 197
Query: 204 LQIAKITEEG 213
+ I +G
Sbjct: 198 ADVVVIGPQG 207
>gi|407465690|ref|YP_006776572.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
gi|407048878|gb|AFS83630.1| proteasome endopeptidase complex protein [Candidatus Nitrosopumilus
sp. AR2]
Length = 210
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 98/189 (51%), Gaps = 7/189 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K KDG+++ ADM S G I + +I+ I +H+ L +G ++D Q ++
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQQIDQHAGLTLAGGVADAQNIV--- 68
Query: 87 DELILYDNMW--DDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
D L + N+ + NS+ L + + + +N+ P ++LGG L V
Sbjct: 69 DILRYHSNLHRVEKQNSISIHSLARLCSLIFH--QNRGYPFMADILLGGYDANGPSLFNV 126
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
M G E S+V TG G+ +A +L +E+ E+L+ E+ ++ + ++ + R+ + +
Sbjct: 127 DMFGSVEEKSYVTTGSGSPVAYGLLEEEYKEDLTIEEAKQVALRAVKAAIVRNIGTGDGI 186
Query: 205 QIAKITEEG 213
IA + ++G
Sbjct: 187 NIAIMDKDG 195
>gi|126465830|ref|YP_001040939.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595722|sp|A3DN21.1|PSB1_STAMF RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126014653|gb|ABN70031.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 213
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 97/190 (51%), Gaps = 3/190 (1%)
Query: 29 SVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDE 88
+V+ +K +G+++A + +Y + K+ ++ PI KH +G +G + D Q ++R L
Sbjct: 19 TVLGIKAVNGVVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRAL-R 77
Query: 89 LILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIG 148
+ + G + + L L+ ++Y+ K PL +V+GG + ++ +G
Sbjct: 78 MEAENYELQLGREIRVRGLAKILSLILYS--YKLAPLMTEVVVGGFDEKGPQIYVLDPVG 135
Query: 149 VNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAK 208
ED +VA G G +A I+ E+ E++ ++ KL +R + RD + + + + +
Sbjct: 136 SLIEDKYVALGSGGPIALGIIEKEYREDIDVDEAEKLAVSAIREAIERDAVSGDGVDVLR 195
Query: 209 ITEEGTTISQ 218
ITEEG ++ +
Sbjct: 196 ITEEGYSLRE 205
>gi|161529236|ref|YP_001583062.1| proteasome endopeptidase complex protein [Nitrosopumilus maritimus
SCM1]
gi|302595719|sp|A9A2U7.1|PSB2_NITMS RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|160340537|gb|ABX13624.1| Proteasome endopeptidase complex [Nitrosopumilus maritimus SCM1]
Length = 210
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 99/189 (52%), Gaps = 7/189 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K KDG+++ ADM S G I + +I+ I H+ L +G ++D Q N+
Sbjct: 12 GTTTVGIKAKDGVVLCADMRASAGYFIANNNTMKIQKIDDHAGLTLAGGVADAQ----NI 67
Query: 87 DELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+++ Y + GP +HS L ++++ +N+ P +++GG L +
Sbjct: 68 VDILRYHSNLHRVEKHGPISIHSLARLCSLIFH-QNRGYPFMADILVGGYDAEGPALFNI 126
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
M G + ++V TG G+ +A +L +E+ E+L+ E+ K+ + ++ + R+ + +
Sbjct: 127 DMFGSVEKKAYVTTGSGSPVAYGLLEEEYREDLTVEEAKKIALRAVKAAIVRNIGTGDGI 186
Query: 205 QIAKITEEG 213
IA + ++G
Sbjct: 187 NIAIMDKDG 195
>gi|325958081|ref|YP_004289547.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
AL-21]
gi|325329513|gb|ADZ08575.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. AL-21]
Length = 210
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 96/187 (51%), Gaps = 5/187 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDGI+ A + S G+ I +K ++I I H +G +SD Q+L+ +
Sbjct: 9 GTTTVGVTCKDGIVFATERRASMGNLIAHKVADKIFKIDDHIGATIAGSVSDAQKLMGYI 68
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E+ LY +G + + + + +++ R F P + +LGGV L +
Sbjct: 69 SAEVALY--RLRNGAPMSVEAAANMTSNILHASR--FYPYYVQTLLGGVDEKGPALFSLD 124
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G +D ++TG G+ +A +L D +++ + E+G ++ + ++ + RD + N ++
Sbjct: 125 PSGGVIKDLMISTGSGSPVAYGVLEDRYNQEMDIEEGTSVVIRAIKAAMERDTYSGNGIK 184
Query: 206 IAKITEE 212
+A IT+E
Sbjct: 185 VATITKE 191
>gi|57642142|ref|YP_184620.1| proteasome subunit beta 2 [Thermococcus kodakarensis KOD1]
gi|74505318|sp|Q5JHL8.1|PSB2_PYRKO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|57160466|dbj|BAD86396.1| proteasome, beta subunit 2 [Thermococcus kodakarensis KOD1]
Length = 199
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 95/190 (50%), Gaps = 7/190 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V ++ K+G+++AAD S + ++ +I PI + +G + D Q L R
Sbjct: 5 TGTTTVGIRTKEGVVLAADTQASLDHMVETLNIRKILPITDRIAITTAGSVGDVQALARM 64
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L+ E Y W G + K + L+ ++ NK+ P +++GG +
Sbjct: 65 LEAEARYYQFTW--GRPMTAKAMAHLLSNIL--NENKWFPYMVQIIIGGYVEEPTLANLD 120
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNK 203
+ G+ F+D + ATG G+ A +L D + +++S E+ +L + +R RD + K
Sbjct: 121 PLGGLIFDD-YTATGSGSPFAIAVLEDGFRKDMSLEEAKELAVRAVRTAGKRDVYTGDRK 179
Query: 204 LQIAKITEEG 213
+Q+ I+++G
Sbjct: 180 VQVVVISKDG 189
>gi|409095355|ref|ZP_11215379.1| proteasome subunit beta [Thermococcus zilligii AN1]
Length = 206
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 6/193 (3%)
Query: 22 LPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQE 81
L GT+ V L +DG+++AAD + G+ I K V +I I H + +G + D
Sbjct: 5 LSAAKGTTTVGLICRDGVILAADKRATMGNMITSKEVTKIFQIDDHLAIAGAGLVGDILS 64
Query: 82 LLRNL-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKY 140
++R L E LY G + K L + + +++ R W ++GG +
Sbjct: 65 MVRLLRAEARLYRARV--GREMSVKVLTTLIANILHGGRGYGYFAW--FLVGGYDTEPRL 120
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
+ + GV E+ +VA G G A IL +E+ E LS EDG++L K + + RD
Sbjct: 121 YSIDAAGGVT-EEKYVAAGSGMEFALAILENEFSEGLSLEDGMRLAAKAVNAAIKRDVYT 179
Query: 201 VNKLQIAKITEEG 213
+ + +T+EG
Sbjct: 180 GEGITLVVVTKEG 192
>gi|410721909|ref|ZP_11361231.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
gi|410598027|gb|EKQ52619.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanobacterium sp. Maddingley MBC34]
Length = 209
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 95/186 (51%), Gaps = 5/186 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L KDG++ A + + G+ I +K ++I I H +G +SD Q L++ +
Sbjct: 9 GTTTVGLTCKDGVVFATETRATMGNLIAHKVADKIFKIDDHIGTTIAGAVSDAQSLMKYI 68
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E+ L+ +G + + + + ++++ R P + +LGGV + L +
Sbjct: 69 RAEVALF--RLRNGKRINVEAAATLTSNILHSSRGY--PFYVQTLLGGVDDKGPALYSLD 124
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G +D ++TG G+ +A +L D + E+L E+G+ + + ++ + RD + N +
Sbjct: 125 PTGGVIKDLMISTGSGSPVAYGVLEDRYSEDLYVEEGIDVAIRAIKSAMERDAYSGNSIL 184
Query: 206 IAKITE 211
+A ITE
Sbjct: 185 VATITE 190
>gi|197129685|gb|ACH46183.1| putative proteasome beta 4 subunit [Taeniopygia guttata]
Length = 236
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 47/68 (69%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P RT P VTGTSV+ LK+ G+++AAD GSYGS R++ + R+ + ++LGASG+
Sbjct: 47 PAGRTLSPMVTGTSVLGLKFSGGVMLAADTVGSYGSLARFRGISRLLKVNDSTVLGASGD 106
Query: 76 ISDFQELL 83
++DFQ L
Sbjct: 107 LADFQHLF 114
>gi|345004933|ref|YP_004807786.1| proteasome endopeptidase complex subunit beta [halophilic archaeon
DL31]
gi|344320559|gb|AEN05413.1| proteasome endopeptidase complex, beta subunit [halophilic archaeon
DL31]
Length = 242
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 97/203 (47%), Gaps = 9/203 (4%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ + + D +++A DM S G + K V++++ + H L +G +S Q L+
Sbjct: 47 TGTTTLGIDTGDAVVLATDMRASLGHMVSSKDVQKVEQVHPHGALTIAGSVSAAQNLIET 106
Query: 86 LDELILYDNMWD--DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
L N+++ G + + L + ++ R F S +LGGV + ++
Sbjct: 107 LR---AESNLFEVRRGKEMSMQALSTLTGNLL--RSGAF--YIVSPILGGVDSEGSHVYS 159
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+ +G E+ + +G G+ A +L E+ ++L E + K ++ + RD ++ N
Sbjct: 160 IDALGGTTEEDYAVSGSGSQFALGVLEQEYDDDLDIEGAKTVATKAIKSAMERDTASGNG 219
Query: 204 LQIAKITEEGTTISQPYALKTFW 226
+ IA +T+EG I++ + +
Sbjct: 220 INIAVVTDEGVEITKEKDIDSLL 242
>gi|332796202|ref|YP_004457702.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
gi|332693937|gb|AEE93404.1| Proteasome endopeptidase complex [Acidianus hospitalis W1]
Length = 209
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 95/197 (48%), Gaps = 4/197 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDG+++AAD S G + K V +I I + + +G ++D Q L L
Sbjct: 11 GTTTVGILAKDGVVLAADRRASEGFFVANKMVRKILYITDNIGITTAGSVADLQFLYYVL 70
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
L Y N K L +YL + +NK+ P +++GG + Q L +
Sbjct: 71 KNLYHY-NYISGNRPTTVKALATYLANTL--SQNKYFPYLVQILIGGY-DTQPRLYNLDY 126
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
G E+ +VATG G+ +A +L DE+ E+L+ + + + + + + RD + +
Sbjct: 127 FGDMTEEKYVATGSGSPVAMGVLEDEYREDLTADQAMDIAARAVLSAIKRDSYTGTGVIV 186
Query: 207 AKITEEGTTISQPYALK 223
+KIT+ G + Y K
Sbjct: 187 SKITKTGHVEKEVYLRK 203
>gi|397780986|ref|YP_006545459.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
gi|396939488|emb|CCJ36743.1| proteasome beta subunit [Methanoculleus bourgensis MS2]
Length = 214
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 95/190 (50%), Gaps = 10/190 (5%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L +KDG+++A +M + G+ I K ++I I + +G + D Q+L+R +
Sbjct: 11 GTTTVGLIFKDGVVLATEMRATMGNLIASKRAKKIYKITPRIGMTTAGGVGDAQQLVRII 70
Query: 87 D-ELILYDNMWDDGNSLGPKE--LHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
E LY+ S+G L +YL +N++ P + L++GG G +
Sbjct: 71 QVECSLYEMRRGRTMSVGAASTLLSNYLN------QNRYYPYYVQLLMGGFDEGGPSVYS 124
Query: 144 V-SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
V +M G E+ VATG G+ A +L D++ +++ E+ L + +R + RD +
Sbjct: 125 VDAMGGATREEEIVATGSGSPFAYGVLEDQYRPDMTEEEAKDLAIRAVRSAMRRDAGSGE 184
Query: 203 KLQIAKITEE 212
+ + I ++
Sbjct: 185 NIMVVVIMKD 194
>gi|239782090|pdb|3H4P|AA Chain a, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782091|pdb|3H4P|BB Chain b, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782092|pdb|3H4P|CC Chain c, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782093|pdb|3H4P|DD Chain d, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782094|pdb|3H4P|EE Chain e, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782095|pdb|3H4P|FF Chain f, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782096|pdb|3H4P|GG Chain g, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782104|pdb|3H4P|HH Chain h, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782105|pdb|3H4P|II Chain i, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782106|pdb|3H4P|JJ Chain j, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782107|pdb|3H4P|KK Chain k, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782108|pdb|3H4P|LL Chain l, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782109|pdb|3H4P|MM Chain m, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
gi|239782110|pdb|3H4P|NN Chain n, Proteasome 20s Core Particle From Methanocaldococcus
Jannaschii
Length = 219
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 96/192 (50%), Gaps = 7/192 (3%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL- 86
T+ V L D +++A D S G+ + K +++ I + + +G + D Q ++R L
Sbjct: 2 TTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRLLI 61
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMV 144
E LY G ++ P + L+ ++++ R P +++GG + G K +
Sbjct: 62 AEAKLYK--MRTGRNIPPLACATLLSNILHSSR--MFPFLTQIIIGGYDLLEGAKLFSLD 117
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+ G+N E + ATG G+ +A +L + ++S E+G+KL ++ + RD + N +
Sbjct: 118 PLGGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGI 177
Query: 205 QIAKITEEGTTI 216
+A IT++G I
Sbjct: 178 SLAVITKDGVKI 189
>gi|219851431|ref|YP_002465863.1| proteasome beta-type subunit [Methanosphaerula palustris E1-9c]
gi|302595895|sp|B8GG66.1|PSB_METPE RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|219545690|gb|ACL16140.1| Proteasome, beta-type subunit, conserved site [Methanosphaerula
palustris E1-9c]
Length = 211
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 95/190 (50%), Gaps = 10/190 (5%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ + + +KDGI++A + + GS I K +++ + + +G + D Q+L R +
Sbjct: 9 GTTTIGIVFKDGIILATEKRATMGSMIASKRAKKVYQVADRIGMTTAGGVGDAQQLARIM 68
Query: 87 D-ELILYDNMWDDGNSLGPKE--LHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLG 142
E LY S+G L +YL +N+ P + L++GGV G
Sbjct: 69 SVECNLYQIRRGRSISVGASSTLLSNYLN------QNRGYPYYVQLLVGGVDATGPSVYS 122
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ +M G E VATG G+ +A +L D + ++L+ ++ ++L + +R + RD ++
Sbjct: 123 VDAMGGATRESDIVATGSGSPMAYGVLEDRYKKDLTEDEAIELAIRALRAAMRRDSASGE 182
Query: 203 KLQIAKITEE 212
+ + IT++
Sbjct: 183 GIHVVIITKD 192
>gi|374633938|ref|ZP_09706303.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373523726|gb|EHP68646.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 212
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 100/195 (51%), Gaps = 4/195 (2%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+ ++ + GT+ V L KD +++AAD S G + K V +I I + + +G ++D
Sbjct: 10 KQKIKILKGTTTVGLVVKDAVVLAADRRASAGFFVANKMVRKILYIDERIGITTAGSVAD 69
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ 138
Q + L + Y N + K L +YLT ++ ++K+ P +++GG + Q
Sbjct: 70 LQFIYNYLKNIYHY-NYISGNRPVTVKALATYLTNIL--SQSKYFPYLVQILIGGY-DVQ 125
Query: 139 KYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDR 198
L + +G E+++VATG G+ +A +L D + +++ ++ V+L + + + RD
Sbjct: 126 PRLFNLDYLGDMTEETYVATGSGSPVAMGVLEDGYRPSMTPDEAVELATRAVLSAIKRDS 185
Query: 199 SAVNKLQIAKITEEG 213
+ + KIT++G
Sbjct: 186 FTGTGVIVTKITKDG 200
>gi|330834117|ref|YP_004408845.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
gi|329566256|gb|AEB94361.1| proteasome endopeptidase complex [Metallosphaera cuprina Ar-4]
Length = 217
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 103/204 (50%), Gaps = 5/204 (2%)
Query: 10 LVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSL 69
+ P+ P + + + GT+ V L KD +++AAD S G + K V +I I
Sbjct: 7 FIEPDTP-SKNSIKILKGTTTVGLVAKDSVVLAADRRASAGFFVANKMVRKIVYIDDRIG 65
Query: 70 LGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
+ +G ++D Q + N + I + N+ + K L +YLT V+ ++K+ P +
Sbjct: 66 MTTAGSVADLQ-FIYNYMKNIYHYNVISGNRPVTVKSLATYLTNVL--SQSKYFPYLVQI 122
Query: 130 VLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKC 189
++GG + Q L + +G E+++VATG G+ +A +L D + +LS E+ + L +
Sbjct: 123 LIGGY-DTQPRLFNLDYLGDMTEETYVATGSGSPVAMGVLEDGYRPDLSGEEAMDLGARA 181
Query: 190 MRVLLYRDRSAVNKLQIAKITEEG 213
+ + RD + + K++++G
Sbjct: 182 VLSAIKRDSFTGTGVIVTKLSKDG 205
>gi|288561233|ref|YP_003424719.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
gi|302595755|sp|D3E0A3.1|PSB_METRM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288543943|gb|ADC47827.1| proteasome beta subunit [Methanobrevibacter ruminantium M1]
Length = 207
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 95/188 (50%), Gaps = 8/188 (4%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDG++ A++ S G+ + +K E+I I H +G ++D Q L++ +
Sbjct: 9 GTTTVGITCKDGVVFASERRASMGNLVAHKVAEKIFKIDNHIAATIAGSVADAQTLMKVI 68
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY +G + + + + ++++ P + ++GGV + + +
Sbjct: 69 SAETSLY--RLRNGKDISLEAAAAVSSNILHSS-----PAYVQTLIGGVDDTGASIYSLD 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G +D+ ++TG G+ A +L D ++E+++ E+ ++ + ++ RD + N
Sbjct: 122 AAGGMIKDTFISTGSGSTFAYGVLEDRFYEDITVEEATEVAIRAIKAATERDTFSGNGFL 181
Query: 206 IAKITEEG 213
+A +T++G
Sbjct: 182 VANVTKDG 189
>gi|390960707|ref|YP_006424541.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
gi|390519015|gb|AFL94747.1| proteasome subunit beta 1 [Thermococcus sp. CL1]
Length = 203
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDG+++AAD S G+ + ++V ++ I H L +G + D L+R L
Sbjct: 7 GTTTVGIVCKDGVVLAADRRASLGNMVLSENVTKVFWIDDHLALAGAGSVGDILSLVRLL 66
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY G + K L + + V++ N+F P + ++ G + + L +
Sbjct: 67 RAEAKLYRARV--GKEMSVKALATLTSNVLHG--NRFMPYFGWFLIAG-HDEKPGLYSID 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
M G ED A G G A IL + + E++ E GVKL + ++ RD +
Sbjct: 122 MAGGVTEDKFTAAGSGMEFAFSILEENYREDMPLEGGVKLALRAIKAATRRDVFTGGGVT 181
Query: 206 IAKITEEG 213
+ +T EG
Sbjct: 182 LVTVTREG 189
>gi|15920692|ref|NP_376361.1| proteasome subunit beta [Sulfolobus tokodaii str. 7]
gi|74574726|sp|Q975D1.1|PSB2_SULTO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|15621475|dbj|BAB65470.1| proteasome beta subunit [Sulfolobus tokodaii str. 7]
Length = 207
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 99/191 (51%), Gaps = 10/191 (5%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQ---EL 82
TGT+ V +K KDG+++AAD S G + +K V ++ + + + +G ++D Q +L
Sbjct: 12 TGTTTVGIKVKDGVVLAADRRASAGMYVAHKYVRKVLYVAPNIGITTAGSVADLQFIYDL 71
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
L+N I + N+ + K L +YL ++ +K+ P +++GGV + Q L
Sbjct: 72 LKN----IYHYNLITGMRPITIKALATYLANML--SFSKYLPYIVQILIGGV-DEQPRLY 124
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ +G E+ + ATG G+ A ++ DE+ +++ ++ L + + + RD
Sbjct: 125 NLDYVGDITEEDYTATGSGSVEAIGVIEDEYRPDMTLDEAADLARRAIFSSIKRDPYTGT 184
Query: 203 KLQIAKITEEG 213
+ ++KIT+ G
Sbjct: 185 GVIVSKITKNG 195
>gi|307353377|ref|YP_003894428.1| proteasome endopeptidase complex subunit beta [Methanoplanus
petrolearius DSM 11571]
gi|307156610|gb|ADN35990.1| proteasome endopeptidase complex, beta subunit [Methanoplanus
petrolearius DSM 11571]
Length = 209
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 98/198 (49%), Gaps = 6/198 (3%)
Query: 17 IQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEI 76
+Q T + GT+ V L + G+++A + + G+ I K +++ I + +G +
Sbjct: 4 MQSTSENILKGTTTVGLVFDGGVILATERRATMGNMIASKKAKKVYQIADRIGMTTAGGV 63
Query: 77 SDFQELLRNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK 135
D Q+L R + E LY+ S+G S L+ ++ N N+ P + L++GGV
Sbjct: 64 GDAQQLARWVQVECSLYNIRRGREMSVGAS--ASLLSNILNN--NRMMPYYVQLLVGGVD 119
Query: 136 NGQKYLGMVSMIG-VNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLL 194
+G + V +G + ED VATG G+ A +L D + + + +D V L + +R +
Sbjct: 120 SGGPSIYSVDALGGASPEDDIVATGSGSPFAYGVLEDRFEKGMPEKDCVDLAIRALRSAM 179
Query: 195 YRDRSAVNKLQIAKITEE 212
RD ++ + + IT++
Sbjct: 180 RRDSASGEDISVVVITKD 197
>gi|435851174|ref|YP_007312760.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
gi|433661804|gb|AGB49230.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanomethylovorans hollandica DSM 15978]
Length = 210
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 99/191 (51%), Gaps = 6/191 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V + G+++A + + G I K+ ++I I + +G + D Q+++
Sbjct: 6 YLKGTTTVGIVCDKGVVLATERRATMGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQIV 65
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYL 141
R + E LY + ++ K + + L+ ++ +R + PL L++GGV KNG
Sbjct: 66 RVMSVESHLYKMRRKEPMTI--KGITTLLSNILSGQR--YYPLMVQLLVGGVDKNGPAIF 121
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ ++ G E VATG G+ +A +L D + + LS E+GV+L + + + RD ++
Sbjct: 122 SLDALGGTIEETKAVATGSGSPMAYGVLEDRFVDGLSIEEGVELAIRALHNAMKRDSASG 181
Query: 202 NKLQIAKITEE 212
N + + IT +
Sbjct: 182 NGIDVVVITAD 192
>gi|359415410|ref|ZP_09207873.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
gi|358034267|gb|EHK02709.1| proteasome subunit beta [Candidatus Haloredivivus sp. G17]
Length = 215
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 102/195 (52%), Gaps = 17/195 (8%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL-DELILYDN 94
+DG+++AAD S G K ++I + ++ L +G + D Q ++R + +L L+
Sbjct: 27 EDGVVLAADRRASMGHLTASKYAQKIYRLDENLGLTIAGSVGDAQRIVRMMRSQLKLH-- 84
Query: 95 MWDDGNSLGPKELH-----SYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGV 149
L KEL + L+ ++++ +K P N +LGG+++G L + G
Sbjct: 85 ------KLETKELSVRGAGTLLSNILHS--SKMMPYMNQFILGGLEDGNGKLFDLDPAGG 136
Query: 150 NFEDSH-VATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAK 208
E ++ ATG G+ +A +L D + E++ + +G++L +K ++ + RD ++ N + + +
Sbjct: 137 LMEHNYFTATGSGSQMAYGVLEDHYEEDMGHSEGLELAKKAIKSAMERDTASGNGIMVVE 196
Query: 209 ITEEGTTISQPYALK 223
ITE+G + + K
Sbjct: 197 ITEDGYNVVEEVEAK 211
>gi|448738995|ref|ZP_21721015.1| proteasome subunit beta [Halococcus thailandensis JCM 13552]
gi|445800809|gb|EMA51157.1| proteasome subunit beta [Halococcus thailandensis JCM 13552]
Length = 232
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 11/187 (5%)
Query: 33 LKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL-DELIL 91
L +G+++AADM S G+ + K+ +I + + L SG +S Q L+ +L E+ L
Sbjct: 44 LTAAEGVVLAADMRASAGNMVASKNARKILQVHSSAALTISGSVSAAQSLVESLRAEVRL 103
Query: 92 YDNMWDDGNSLGPKELHSYLTRVMYN--RRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGV 149
Y+ D SL + L + N R F + VLGGV + ++ + G
Sbjct: 104 YETRRDTAMSL------NALANLTANLLRSGNFQIVQP--VLGGVDDEGAHIYSIGPGGS 155
Query: 150 NFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKI 209
E+++ A+G G+ A +L E+ E S +D + ++ RD ++ N L +A I
Sbjct: 156 VMEETYAASGSGSPFALGVLEGEYDEEASVDDAETTAARAVQSATERDTASGNGLSLATI 215
Query: 210 TEEGTTI 216
T+EG I
Sbjct: 216 TDEGVDI 222
>gi|73667743|ref|YP_303758.1| proteasome subunit beta [Methanosarcina barkeri str. Fusaro]
gi|121697221|sp|Q46G14.1|PSB_METBF RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|72394905|gb|AAZ69178.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosarcina barkeri
str. Fusaro]
Length = 211
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 113/207 (54%), Gaps = 12/207 (5%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V + DGI++A++ + G+ I K+ +++ I + +G + D Q+L+
Sbjct: 6 YLKGTTTVGVVCTDGIVLASEQRATMGNFIASKTAKKVYQIDDLVAMTTAGSVGDAQQLV 65
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYL 141
R ++ E LY ++ S+ K + + ++ + + N++ P+ L++GGV KNG
Sbjct: 66 RLVNVESQLYKMRRNE--SMTIKGIATLMSNFLNS--NRYYPMMVQLLIGGVDKNGP--- 118
Query: 142 GMVSM--IGVNFEDSHV-ATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDR 198
G+ S+ +G + E++ + ATG G+ +A +L D++ E+++ ++G+ L + + RD
Sbjct: 119 GIYSLDALGGSIEETRISATGSGSPMAYGVLEDQYREDMTVKEGLDLAIRAIHNATKRDS 178
Query: 199 SAVNKLQIAKITEEGTTISQPYALKTF 225
++ + + IT+E P +K+
Sbjct: 179 ASGENIDVVVITKEAFRRLDPEEVKSI 205
>gi|352683092|ref|YP_004893616.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275891|emb|CCC82538.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 199
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 97/186 (52%), Gaps = 3/186 (1%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
T+ V +K +DG+++AAD + G I +K E+I I +H SG ++D Q LL N+
Sbjct: 2 TTTVGIKARDGVVLAADKRVTAGYYIAHKRGEKIWKIDEHVAATMSGGVADLQGLL-NIL 60
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
+ + + G + K L +Y + V++ R F L +S++ GG + L M+ +
Sbjct: 61 SIQAREYRSEHGRPIPIKTLVNYASLVLFYSR-PFIYLVHSII-GGYDDEGPQLYMLDWL 118
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G + ++ATG G+ A +L + +++S ++ +K+ E ++ + D + + I
Sbjct: 119 GSYSSERYIATGSGSPYAMGVLEVNYRDDISIDEAIKVAENAVKAAMRNDPGSGEGIDIV 178
Query: 208 KITEEG 213
IT+EG
Sbjct: 179 VITKEG 184
>gi|15897221|ref|NP_341826.1| proteasome subunit [Sulfolobus solfataricus P2]
gi|284174466|ref|ZP_06388435.1| proteasome subunit [Sulfolobus solfataricus 98/2]
gi|384433733|ref|YP_005643091.1| proteasome endopeptidase complex subunit beta [Sulfolobus
solfataricus 98/2]
gi|74557429|sp|Q980L4.1|PSB1_SULSO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595697|sp|D0KRX1.1|PSB1_SULS9 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|13813418|gb|AAK40616.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261601887|gb|ACX91490.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
solfataricus 98/2]
Length = 196
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
+ V LK DGI++A++ SYG + K +++ I K + GA G D Q L R ++
Sbjct: 6 ATAVGLKVNDGIVLASERRLSYGGYVLSKQAKKVYKINKFLMAGA-GIYGDLQTLTRIMN 64
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
I Y + G + L+ ++Y + K P + ++ GGV L ++ I
Sbjct: 65 VEIKYYEV-STGKPISVHAAAKLLSVILY--QYKVMPFISEILFGGVDEKGPQLYVLDPI 121
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G ED++ A G G +A +L E+ N+S + +L+ K ++ + RD ++ + + +A
Sbjct: 122 GSLIEDNYAAVGSGARIAIGVLESEYDPNMSLDVATQLITKAIKASIERDITSGDGIDLA 181
Query: 208 KITEEG 213
I ++G
Sbjct: 182 IIDKKG 187
>gi|15679213|ref|NP_276330.1| proteasome subunit beta [Methanothermobacter thermautotrophicus
str. Delta H]
gi|6685781|sp|O27270.1|PSB_METTH RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2622311|gb|AAB85691.1| proteasome, beta subunit [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 210
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 95/188 (50%), Gaps = 7/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDG++ A + S G+ I +K+ ++I I +H +G ++D Q L++ L
Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYL 68
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMV 144
E LY + + + + ++++ R F P +LGGV +NG K +
Sbjct: 69 KAEAALY--RMRNSEKISIEAAAALAANILHSSR--FYPFIVQTLLGGVDENGAKIYSLD 124
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G+ D V+TG G+ +A +L D + + L ++ V + + ++ + RD + N +
Sbjct: 125 PSGGM-IPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNGI 183
Query: 205 QIAKITEE 212
+A +TEE
Sbjct: 184 LVATVTEE 191
>gi|119719309|ref|YP_919804.1| proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
gi|302595733|sp|A1RX71.1|PSB2_THEPD RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119524429|gb|ABL77801.1| Proteasome endopeptidase complex [Thermofilum pendens Hrk 5]
Length = 204
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 99/189 (52%), Gaps = 9/189 (4%)
Query: 29 SVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD- 87
+ V ++ DG+++AA+ SYG + KS +++ I + ++G ++D Q L R ++
Sbjct: 7 TTVGIRVSDGVVLAAEKRVSYGLYLMSKSGKKVYRILDKMGMASAGLMADMQTLARIVEA 66
Query: 88 ELILYDNMWDDGNSLGPK--ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E+ LY+ D N + PK + L+ ++Y RR P + +V+GG+ +L +
Sbjct: 67 EMRLYEL---DSN-ISPKVWTVAKLLSYILYERR--LFPYYAEIVVGGLDEEGSHLYSLD 120
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
IG ED +VA G G LA I+ + +++S ++ + L K + + RD ++ + +
Sbjct: 121 PIGAIIEDDYVALGSGTQLAISIVESNYKKDMSLDEALSLALKSVYAAMKRDAASGDGVD 180
Query: 206 IAKITEEGT 214
+ I + GT
Sbjct: 181 VLVIGKSGT 189
>gi|448339328|ref|ZP_21528356.1| proteasome endopeptidase complex subunit beta [Natrinema pallidum
DSM 3751]
gi|445620557|gb|ELY74053.1| proteasome endopeptidase complex subunit beta [Natrinema pallidum
DSM 3751]
Length = 239
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
+G+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY
Sbjct: 54 EGVVIATDMRASLGGRFVSNKDVQKVEQIHPTGALTLVGSVGGAQSFIRTLRA--EVNLY 111
Query: 93 DNMWDDGNSLGPKELHSYLTRV-MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
++ D+ P + + T + R F + + +LGGV ++ + G
Sbjct: 112 ESRRDE-----PMPIEALATLAGNFARGGPFRAI--NPILGGVDAEGSHVYSIDPAGGVM 164
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
D + TG G LA +L E+ ++LS ED + + ++ + RD + N + +A+IT+
Sbjct: 165 ADDYTVTGSGMQLAYGLLEQEYEDDLSLEDAQSVAARAIKSAVERDTGSGNGVFLAEITD 224
Query: 212 EGTTI 216
EG I
Sbjct: 225 EGVDI 229
>gi|448733559|ref|ZP_21715802.1| proteasome subunit beta [Halococcus salifodinae DSM 8989]
gi|445802448|gb|EMA52753.1| proteasome subunit beta [Halococcus salifodinae DSM 8989]
Length = 231
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 7/182 (3%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD-ELILYDN 94
+DG+++AADM S G+ + K +++ + + L SG +S Q L+ +L E+ LY+
Sbjct: 46 EDGVVLAADMRASAGNMVASKDAQKVLEVHPTAALTISGSVSAAQSLVNSLQAEVRLYET 105
Query: 95 MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDS 154
D G SL E + LT + R F + VLGGV + ++ + G +
Sbjct: 106 RRDTGMSL---EALANLTANLL-RSGNFQIVQP--VLGGVDDDGSHVYGIGPGGSVMAED 159
Query: 155 HVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGT 214
+ +G G+ A +L E+ S ED + + ++ RD ++ N L +A IT +G
Sbjct: 160 YAVSGSGSPFALGVLEQEYDVGTSVEDAKTIAARAVQSATERDTASGNGLTLATITADGV 219
Query: 215 TI 216
TI
Sbjct: 220 TI 221
>gi|227828116|ref|YP_002829896.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
M.14.25]
gi|227830823|ref|YP_002832603.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
gi|229579719|ref|YP_002838118.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229581613|ref|YP_002840012.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|229585355|ref|YP_002843857.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238620316|ref|YP_002915142.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284998338|ref|YP_003420106.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|385773795|ref|YP_005646362.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
gi|385776430|ref|YP_005648998.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|302595724|sp|D2PDG6.1|PSB2_SULID RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595743|sp|C3MZI0.1|PSB2_SULIA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595744|sp|C4KIR0.1|PSB2_SULIK RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595746|sp|C3NFX2.1|PSB1_SULIN RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595751|sp|C3MRE5.1|PSB2_SULIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595758|sp|C3MY41.1|PSB2_SULIM RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|302595897|sp|C3N7K2.1|PSB2_SULIY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|227457271|gb|ACP35958.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459912|gb|ACP38598.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228010434|gb|ACP46196.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228012329|gb|ACP48090.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|228020405|gb|ACP55812.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238381386|gb|ACR42474.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284446234|gb|ADB87736.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|323475178|gb|ADX85784.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477910|gb|ADX83148.1| Proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 196
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 93/186 (50%), Gaps = 4/186 (2%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
+ + LK DGI++A++ SYG + K +++ IGK + GA G D Q L R ++
Sbjct: 6 ATAIGLKVNDGIVLASERRLSYGGYVLSKQAKKVHKIGKFLMAGA-GIYGDLQTLTRIMN 64
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
I Y + G + L+ ++Y + K P + ++ GGV L ++ I
Sbjct: 65 VEIKYYEI-STGKPISVHAAAKLLSVILY--QYKVMPFISEILFGGVDEKGPQLYVLDPI 121
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G ED++ A G G +A +L E+ N++ + +L+ K ++ + RD ++ + + +A
Sbjct: 122 GSLIEDNYAAVGSGARIAIGVLESEYDPNMNLDIAAQLITKAIKASIERDITSGDGIDLA 181
Query: 208 KITEEG 213
+ ++G
Sbjct: 182 IMDKKG 187
>gi|8117714|gb|AAF72737.1|AF097521_1 proteasome B type subunit [Cryptosporidium parvum]
Length = 210
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++VALKYKDG+++AAD S G I +++ +I I + SG +D Q + R
Sbjct: 12 TGTTIVALKYKDGLVLAADGRTSTGPIIAFRAARKITQITDKVFMCRSGSAADTQIISRY 71
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ I+ D+ + G K + S + Y +NK L + ++ G NG+ + +
Sbjct: 72 VRR-IVQDHELETGEDTKVKSVASVARLISY--QNKEHLLADMIIAGMDPNGEFKVFRIP 128
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
+ G E S+ +G G+ +L ++H + ++ + ++RD S+ ++
Sbjct: 129 LGGTLIEGSYAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAMFRDSSSGGIIR 188
Query: 206 IAKITEEGT 214
I I + G
Sbjct: 189 IIVINKSGV 197
>gi|20092669|ref|NP_618744.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
gi|74551014|sp|Q8TJB5.1|PSB_METAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19917953|gb|AAM07224.1| multicatalytic endopeptidase complex, subunit beta [Methanosarcina
acetivorans C2A]
Length = 210
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 105/203 (51%), Gaps = 6/203 (2%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V + DGI++A++ + G I K+ +++ I + +G + D Q+L+
Sbjct: 6 YLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLV 65
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYL 141
R + E LY ++ S+ K + + ++ + N++ P+ L++GGV KNG
Sbjct: 66 RLVSVESQLYKMRRNE--SMTIKGIATLMSNFL--NANRYYPMMVQLLIGGVDKNGPAIY 121
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ +M G E ATG G+ +A +L D++ E+++ ++G+ L + + + RD ++
Sbjct: 122 SLDAMGGSIEETRISATGSGSPMAYGVLEDQYKEDIAVKEGLDLAIRAIHNAMKRDSASG 181
Query: 202 NKLQIAKITEEGTTISQPYALKT 224
+ + IT+E P +K+
Sbjct: 182 ENIDVVVITKEAFKRLDPEEVKS 204
>gi|341582772|ref|YP_004763264.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
gi|340810430|gb|AEK73587.1| proteasome subunit beta 2 [Thermococcus sp. 4557]
Length = 200
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 93/183 (50%), Gaps = 7/183 (3%)
Query: 33 LKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD-ELIL 91
+K +DG+++AAD S + ++ +I PI + +G + D Q L R L+ E
Sbjct: 13 IKARDGVVLAADTQASLDHMVETLNIRKIVPITDRIAITTAGSVGDVQALARMLEAEARY 72
Query: 92 YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
Y W+ + + + + L+ ++ NK+ P +++GG + + +M G+ F
Sbjct: 73 YQFTWN--RPMTTRAMANLLSNIL--NENKWFPYLVQIIIGGYVDEPTLANLDAMGGLVF 128
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNKLQIAKIT 210
+D + ATG G+ A +L D + +++S E+ +L + +R RD + K+Q+ IT
Sbjct: 129 DD-YTATGSGSPFAIAVLEDGFKKDMSVEEAKELAVRAVRTAGKRDVYTGDRKVQVVVIT 187
Query: 211 EEG 213
++G
Sbjct: 188 KDG 190
>gi|66358282|ref|XP_626319.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
gi|46228005|gb|EAK88925.1| Pre3p/proteasome regulatory subunit beta type 6, NTN hydrolase fold
[Cryptosporidium parvum Iowa II]
Length = 248
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 3/189 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++VALKYKDG+++AAD S G I +++ +I I + SG +D Q + R
Sbjct: 50 TGTTIVALKYKDGLVLAADGRTSTGPIIAFRAARKITQITDKVFMCRSGSAADTQIISRY 109
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ I+ D+ + G K + S + Y +NK L + ++ G NG+ + +
Sbjct: 110 VRR-IVQDHELETGEDTKVKSVASVARLISY--QNKEHLLADMIIAGMDPNGEFKVFRIP 166
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
+ G E S+ +G G+ +L ++H + ++ + ++RD S+ ++
Sbjct: 167 LGGTLIEGSYAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAMFRDSSSGGIIR 226
Query: 206 IAKITEEGT 214
I I + G
Sbjct: 227 IIVINKSGV 235
>gi|327401050|ref|YP_004341889.1| proteasome endopeptidase complex subunit beta [Archaeoglobus
veneficus SNP6]
gi|327316558|gb|AEA47174.1| proteasome endopeptidase complex, beta subunit [Archaeoglobus
veneficus SNP6]
Length = 214
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 98/188 (52%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L KDGI++A + + G+ I + ++I + + +G + D Q L R +
Sbjct: 11 GTTTVGLICKDGIVLATEKRATIGNYIASRRAKKIYQVADRVAMTTAGSVGDAQFLARLV 70
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMV 144
E LY+ ++ ++ K + + L+ ++ + R + P + L++GGV K G +
Sbjct: 71 KVEASLYETRKEEKPTV--KAIATMLSNLLNSSR--YFPYFVQLLIGGVDKRGPSMFSID 126
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+ G E VATG G+ A +L D ++ ++ ++GV+L + + + RD ++ + +
Sbjct: 127 PIGGAIEETDIVATGSGSPTAYGVLEDRYYPEITTQEGVELAIRAITSAMKRDSASGDGI 186
Query: 205 QIAKITEE 212
+ KIT++
Sbjct: 187 DVVKITKD 194
>gi|448399829|ref|ZP_21571062.1| proteasome endopeptidase complex subunit beta [Haloterrigena
limicola JCM 13563]
gi|445668282|gb|ELZ20912.1| proteasome endopeptidase complex subunit beta [Haloterrigena
limicola JCM 13563]
Length = 231
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
+G+++A DM GG + S + VE+I P +L+G+ G F LR+ E+ LY
Sbjct: 46 EGVVIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFIRTLRS--EVDLY 103
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ +G ++ E + L + R F + + +LGGV + ++ + G E
Sbjct: 104 EARRGEGMNI---EALATLAG-NFARGGPFRAI--NPILGGVDDEGSHVYSIDPAGGVME 157
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA +L E+ E+LS ED + + ++ + RD + N + +A+IT+E
Sbjct: 158 DDYTVTGSGMQLAYGLLEQEYTEDLSLEDAKSIAARAIKSAVERDTGSGNGVFLAEITDE 217
Query: 213 GTTI 216
G I
Sbjct: 218 GVEI 221
>gi|116753407|ref|YP_842525.1| proteasome endopeptidase complex [Methanosaeta thermophila PT]
gi|121694316|sp|A0B5B1.1|PSB_METTP RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|116664858|gb|ABK13885.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanosaeta thermophila
PT]
Length = 207
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + G+++A++ + GS I ++ ++I I L +G + D Q L+R +
Sbjct: 7 GTTTVGIVCDGGVVLASESRATMGSFIASRTAKKIYQIDDLVGLTTAGVVGDAQALVRMI 66
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMV 144
E LY G L K + S L+ ++ RR + P LV+GGV K G K +
Sbjct: 67 QAEARLYR--MQRGEPLTIKAITSLLSNILSARR--YFPFLVQLVVGGVDKMGPKIFSLD 122
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
++ G E V+TG G+ +A +L + LS +DG L + + + RD ++ N +
Sbjct: 123 ALGGQIEEHDIVSTGSGSPIAYGVLESLYKPGLSIQDGSVLCVRAVHTAMKRDSASGNGI 182
Query: 205 QIAKITEE 212
+ +IT++
Sbjct: 183 ALVRITKD 190
>gi|156937409|ref|YP_001435205.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595692|sp|A8AA46.1|PSB1_IGNH4 RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|156566393|gb|ABU81798.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 198
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 4/171 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G + V +K KDG+++AA+ SYG I K+ ++ +G + +G +D Q + R L
Sbjct: 5 GATAVGIKVKDGVVLAAERRMSYGGFIMSKAARKVFKVGDRMGMACAGLYADMQAIARAL 64
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
+ I Y + + + + L ++Y+ NK PL V GG + + ++
Sbjct: 65 ENEIRYYEISNK-RKMKVRSAARLLGLILYS--NKLFPLMTETVFGGYDDEPRIF-VLDP 120
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+G E+ + A G G LA +L E+ E++S E+ L + ++V RD
Sbjct: 121 VGSVIEEKYSAVGTGAPLAMALLDKEYREDMSLEEAQNLAIESVKVASGRD 171
>gi|269862441|ref|XP_002650839.1| 20S proteasome core particle subunit beta 7 [Enterocytozoon
bieneusi H348]
gi|220065535|gb|EED43215.1| 20S proteasome core particle subunit beta 7 [Enterocytozoon
bieneusi H348]
Length = 117
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 124 PLWNSLVLGGVKNGQK-YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDG 182
P S+V+ G++ Q +LG ++ GV +ED+ ++TGF H P+LR + LS +
Sbjct: 3 PKACSVVVAGLEKTQHLFLGCITSKGVFWEDNVISTGFAAHFITPLLRTHPVDTLSLDQA 62
Query: 183 VKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPT 235
L+++ ++++Y+D A N++QIA I+ G + + + T W T Q P+
Sbjct: 63 ESLIKEATKIMVYKDACASNRIQIAVISHTGEIVLKNEKIYTDW--TVAQTPS 113
>gi|304315325|ref|YP_003850472.1| proteasome, subunit beta [Methanothermobacter marburgensis str.
Marburg]
gi|302588784|gb|ADL59159.1| predicted proteasome, subunit beta [Methanothermobacter
marburgensis str. Marburg]
Length = 210
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 91/187 (48%), Gaps = 5/187 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDG++ A + S G+ I +K+ ++I I +H +G ++D Q L++ L
Sbjct: 9 GTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYL 68
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY + + + + ++++ R F P +LGGV + +
Sbjct: 69 KAEAALY--RMRNSERISIEAAAALAANILHSSR--FYPFIVQTLLGGVDETGAKIYSLD 124
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G D V+TG G+ +A +L D + + L +D + + + ++ + RD + N +
Sbjct: 125 PSGGMIPDRFVSTGSGSPVAYGVLEDRYADELYVDDAIDIAIRAIKSAMERDTYSGNGIL 184
Query: 206 IAKITEE 212
+A +TEE
Sbjct: 185 VATVTEE 191
>gi|433590819|ref|YP_007280315.1| proteasome endopeptidase complex, archaeal, beta subunit [Natrinema
pellirubrum DSM 15624]
gi|448331775|ref|ZP_21521026.1| proteasome endopeptidase complex subunit beta [Natrinema
pellirubrum DSM 15624]
gi|433305599|gb|AGB31411.1| proteasome endopeptidase complex, archaeal, beta subunit [Natrinema
pellirubrum DSM 15624]
gi|445628734|gb|ELY82037.1| proteasome endopeptidase complex subunit beta [Natrinema
pellirubrum DSM 15624]
Length = 233
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 90/185 (48%), Gaps = 14/185 (7%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
+G+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY
Sbjct: 48 EGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRA--EVNLY 105
Query: 93 DNMWDDGNSLGPKELHSYLTRV-MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
++ D+ P + + T + R F + + +LGGV + ++ + G
Sbjct: 106 ESRRDE-----PMPIEALATLAGNFARGGPFRAI--NPILGGVDSEGSHVYSIDPAGGVM 158
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
D + TG G LA +L E+ ++LS ED + + ++ + RD + N + +A++T
Sbjct: 159 ADDYTVTGSGMQLAYGLLEQEYEDDLSLEDAKSVAARAIKSAVERDTGSGNGVFLAEVTG 218
Query: 212 EGTTI 216
EG I
Sbjct: 219 EGVDI 223
>gi|55378523|ref|YP_136373.1| proteasome subunit alpha [Haloarcula marismortui ATCC 43049]
gi|74552784|sp|Q5V1D5.1|PSB2_HALMA RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|55231248|gb|AAV46667.1| proteasome subunit alpha [Haloarcula marismortui ATCC 43049]
Length = 230
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 13 PNDPIQRTQLPYV-TGTSVVALKYKDGILMAAD----MGGSYGSTIRYKSVERIKPIGKH 67
PN+ R + V TGT+ V L +DG+++A D +GG + S + + VE+I P
Sbjct: 20 PNEDSGRDEENVVKTGTTTVGLSTEDGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAM 79
Query: 68 SLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
+L+G+ G F LR E LY+ D+ P +H+ T + + P +
Sbjct: 80 TLVGSVGGAQSFIRSLRA--EADLYEVRRDE-----PLSIHALAT--LAGNFARGGPYFA 130
Query: 128 -SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
+ ++GGV ++ V G ED + TG G +A + ++ +S + L
Sbjct: 131 INPIVGGVDEEGSHVYSVDPAGGVLEDDYTVTGSGTMVATGTIEGQYDHGMSLSEARDLA 190
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTI 216
+ + RD + N + +A+IT+EG I
Sbjct: 191 IRAVNAAAERDTGSGNGVVLAEITDEGVEI 220
>gi|448637201|ref|ZP_21675577.1| proteasome subunit alpha [Haloarcula sinaiiensis ATCC 33800]
gi|445764748|gb|EMA15892.1| proteasome subunit alpha [Haloarcula sinaiiensis ATCC 33800]
Length = 230
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 13 PNDPIQRTQLPYV-TGTSVVALKYKDGILMAAD----MGGSYGSTIRYKSVERIKPIGKH 67
PN+ R + V TGT+ V L +DG+++A D +GG + S + + VE+I P
Sbjct: 20 PNEDSGRDEENVVKTGTTTVGLSTEDGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAM 79
Query: 68 SLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
+L+G+ G F LR E LY+ D+ P +H+ T + + P +
Sbjct: 80 TLVGSVGGAQSFIRSLRA--EADLYEVRRDE-----PLSIHALAT--LAGNFARGGPYFA 130
Query: 128 -SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
+ ++GGV ++ V G ED + TG G +A + ++ +S + L
Sbjct: 131 INPIVGGVDEEGSHVYSVDPAGGVLEDDYTVTGSGTMVATGTIEGQYDHGMSLSEARDLA 190
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTI 216
+ + RD + N + +A+IT+EG I
Sbjct: 191 IRAVNAAAERDTGSGNGVVLAEITDEGVEI 220
>gi|225719600|gb|ACO15646.1| Proteasome subunit beta type-6 precursor [Caligus clemensi]
Length = 230
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 19/196 (9%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR- 84
TGT+++A +YKDG+L+AAD S+GS + + +++ P+ L SG +D Q + +
Sbjct: 31 TGTTLLACEYKDGVLLAADCRTSHGSLVVNRETDKLTPVSDKILCCRSGSAADTQAIAKA 90
Query: 85 ---NLDELILYDNMWDDGNSLGPKELHSYLTR-VMYNRRNKFDPLWNSLVLGG---VKNG 137
NLD +Y+ M + P E ++L + + Y R D L +++GG ++ G
Sbjct: 91 IRYNLD---MYNVMMGE---TAPVETVAHLFKSICYEYR---DSLTAGILVGGWDKIRGG 141
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
Q Y + + G+ ++ + G G+ + + E ++ ED K+L + + + D
Sbjct: 142 QVY--SIPLGGMCVRQAYASGGSGSVYLHAFMSANYKEGMNKEDCKKMLIRGIASAVEFD 199
Query: 198 RSAVNKLQIAKITEEG 213
S+ + A IT++G
Sbjct: 200 GSSGGSCRWASITKDG 215
>gi|225717640|gb|ACO14666.1| Proteasome subunit beta type-6 precursor [Caligus clemensi]
Length = 230
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 99/196 (50%), Gaps = 19/196 (9%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR- 84
TGT+++A +YKDG+L+AAD S+GS + + +++ P+ L SG +D Q + +
Sbjct: 31 TGTTLLACEYKDGVLLAADCRTSHGSLVVNRETDKLTPVSDKILCCRSGSAADTQAIAKA 90
Query: 85 ---NLDELILYDNMWDDGNSLGPKELHSYLTR-VMYNRRNKFDPLWNSLVLGG---VKNG 137
NLD +Y+ M + P E ++L + + Y R D L +++GG ++ G
Sbjct: 91 IRYNLD---MYNVMMGE---TAPVETVAHLFKSICYEYR---DSLTAGILVGGWDKIRGG 141
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
Q Y + + G+ ++ + G G+ + + E ++ ED K+L + + + D
Sbjct: 142 QVY--SIPLGGMCVRQAYTSGGSGSVYLHAFMSANYKEGMNKEDCKKMLIRGIASAVEFD 199
Query: 198 RSAVNKLQIAKITEEG 213
S+ + A IT++G
Sbjct: 200 GSSGGSCRWASITKDG 215
>gi|167043167|gb|ABZ07876.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_ANIW141J13]
Length = 208
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K DG+++ ADM S G I + +I+ I H L +G ++D Q NL
Sbjct: 10 GTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIYDHVGLTLAGGVADAQ----NL 65
Query: 87 DELILYD---NMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
+++ Y + ++ K L + V + R P ++LGG L
Sbjct: 66 TDILRYHANVHAVQKNENIPIKSLARLCSLVFHQNRGY--PFIADILLGGYDRDGPALFN 123
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+ M G + S+V TG G+ +A +L DE+ ++L+ ED + + ++ + R+ +
Sbjct: 124 IDMFGSVEKKSYVTTGSGSPVAYGVLEDEYRDDLTLEDAKLIALRAVKAAIVRNIGTGDG 183
Query: 204 LQIAKITEEG 213
+ IA I + G
Sbjct: 184 INIAAINKNG 193
>gi|167045028|gb|ABZ09692.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG8G15]
Length = 210
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 90/190 (47%), Gaps = 9/190 (4%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K DG+++ ADM S G I + +I+ I H L +G ++D Q NL
Sbjct: 12 GTTTVGIKASDGVVLCADMRASAGYFIANNNTMKIQKIYDHVGLTLAGGVADAQ----NL 67
Query: 87 DELILYD---NMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
+++ Y + ++ + L + V + R P ++LGG L
Sbjct: 68 TDILRYHANIHAVQKNENIPIRSLARLCSLVFHQNRGY--PFIADILLGGYDQDGPQLFN 125
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+ M G + S+V TG G+ +A +L DE+ ++L+ ED + + ++ + R+ +
Sbjct: 126 IDMFGSVEKKSYVTTGSGSPVAYGVLEDEYRDDLTLEDAKGIALRAVKAAIVRNIGTGDG 185
Query: 204 LQIAKITEEG 213
+ IA I + G
Sbjct: 186 INIAAIDKNG 195
>gi|284161559|ref|YP_003400182.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
gi|302595818|sp|D2RGT4.1|PSB_ARCPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|284011556|gb|ADB57509.1| Proteasome endopeptidase complex [Archaeoglobus profundus DSM 5631]
Length = 215
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 100/189 (52%), Gaps = 6/189 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L KDG+++A + + G+ I + ++I I + +G + D Q L R +
Sbjct: 12 GTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYRIADRVAMTTAGAVGDAQFLARLI 71
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E+ LY+ ++ ++ K + + L+ ++ + R + P + L++GGV + +
Sbjct: 72 SVEIKLYEIRKEEKPTV--KAIATLLSNILNSVR--WFPYFVQLLVGGVDKRGPSIYSID 127
Query: 146 MIGVNFEDSH-VATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
++G E+ VATG G+ A +L D + ++ +DGV+L + + + RD ++ + +
Sbjct: 128 LLGGAIEEIDIVATGSGSPTAYGVLEDRYTPEITVDDGVELAVRAIYSAMRRDSASGDGI 187
Query: 205 QIAKITEEG 213
+ KIT++G
Sbjct: 188 DVVKITKDG 196
>gi|333988299|ref|YP_004520906.1| proteasome endopeptidase complex subunit beta [Methanobacterium sp.
SWAN-1]
gi|333826443|gb|AEG19105.1| proteasome endopeptidase complex, beta subunit [Methanobacterium
sp. SWAN-1]
Length = 207
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 93/187 (49%), Gaps = 8/187 (4%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L KDGI+ A + + G+ + +K E+I I H +G +S Q L++ +
Sbjct: 9 GTTTVGLTCKDGIVFATERRATMGNLVAHKVAEKIFKIDDHIGATIAGSVSHAQVLMKYI 68
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E+ LY +G + + + ++++ PL+ +LGGV N L +
Sbjct: 69 SAEVALY--RLRNGAIISVEAAATLTANILHSS-----PLYVQTLLGGVDNKGPSLYSLD 121
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G +D ++TG G+ +A +L D ++E++ ++G+ + ++ + RD + N +
Sbjct: 122 PSGGVMKDMMISTGSGSPMAYGVLEDRYNEDMYVDEGIDTAIRAIKSAMERDTFSGNGIL 181
Query: 206 IAKITEE 212
+A IT E
Sbjct: 182 VATITAE 188
>gi|21226796|ref|NP_632718.1| proteasome subunit beta [Methanosarcina mazei Go1]
gi|452209277|ref|YP_007489391.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
gi|74550648|sp|Q8PZ04.1|PSB_METMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|20905092|gb|AAM30390.1| Proteasome, beta subunit [Methanosarcina mazei Go1]
gi|452099179|gb|AGF96119.1| Proteasome subunit beta, archaeal [Methanosarcina mazei Tuc01]
Length = 210
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 103/203 (50%), Gaps = 6/203 (2%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V + DGI++A++ + G I K+ +++ I + +G + D Q+L+
Sbjct: 6 YLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQLV 65
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYL 141
R + E LY ++ S+ K + + ++ + N++ P+ L++GGV KNG
Sbjct: 66 RLVSVESQLYKMRRNE--SMTIKGIATLMSNFL--NANRYYPMMVQLLIGGVDKNGPAIY 121
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ M G E ATG G+ +A +L D++ E+++ ++G+ L + + RD ++
Sbjct: 122 SLDPMGGSIEETRISATGSGSPMAYGVLEDQYREDIAVKEGLDLAIRAIHNATKRDSASG 181
Query: 202 NKLQIAKITEEGTTISQPYALKT 224
+ + IT+E P +K+
Sbjct: 182 ENIDVVVITKEAFKRLDPEEVKS 204
>gi|379005617|ref|YP_005261289.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
gi|375161070|gb|AFA40682.1| proteasome endopeptidase complex, archaeal, beta subunit
[Pyrobaculum oguniense TE7]
Length = 203
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 88/173 (50%), Gaps = 7/173 (4%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G + V +K KDG+++AA+ SYG + +++ I + ++G I+D Q L R +
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQSLARIV 67
Query: 87 DELILYDNMWDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+ ++ P + + L+ +M++RR + P + +++GGV +L ++
Sbjct: 68 K---INAKAYELETRKKPTVRSMAKLLSVIMFSRR--YMPFFAEVLVGGVDEEGNHLIVM 122
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+G ED++ A G G LA +L + E+++ +D KL K ++ + RD
Sbjct: 123 DPLGSLIEDNYAALGTGAKLAISVLDTGYREDITLQDAKKLAVKALKAAIERD 175
>gi|390961463|ref|YP_006425297.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
gi|390519771|gb|AFL95503.1| proteasome subunit beta 2 [Thermococcus sp. CL1]
Length = 200
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 91/183 (49%), Gaps = 7/183 (3%)
Query: 33 LKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD-ELIL 91
+K +DG+++AAD S + ++ +I PI + +G + D Q L R L+ E
Sbjct: 13 IKARDGVVLAADTQASLDHMVETLNIRKIVPITDRIAITTAGSVGDVQALARMLEAEARY 72
Query: 92 YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
Y W+ + K + + L+ ++ NK+ P +++GG + M G+ F
Sbjct: 73 YQFTWN--RPMSTKAMANLLSNIL--NENKWFPYLVQIIIGGYVEEPTLANLDPMGGLIF 128
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD-RSAVNKLQIAKIT 210
+D + ATG G+ A +L D + +++S ++ +L + +R RD + K+Q+ IT
Sbjct: 129 DD-YTATGSGSPFAIAVLEDGFKKDMSVKEARELAIRAVRTAGKRDVYTGSRKVQVVVIT 187
Query: 211 EEG 213
++G
Sbjct: 188 KDG 190
>gi|374636366|ref|ZP_09707939.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
gi|373559248|gb|EHP85553.1| proteasome endopeptidase complex, beta subunit [Methanotorris
formicicus Mc-S-70]
Length = 220
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ GT+ V L D +++A D + G+ I K +++ I + + +G + D Q L+
Sbjct: 7 YMKGTTTVGLICDDAVVLATDKRATMGNLIADKEAKKLYKIDDYIAMTIAGSVGDAQALV 66
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK--NGQKY 140
R + E LY G ++ P + ++ +++ R P L++GG G +
Sbjct: 67 RYVSAEAKLYK--MRTGKNIPPLSCATLMSNILHGSR--MFPFLTQLIIGGYDFLYGPRL 122
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
+ + G+N E ATG G+ A +L E+ ++ +DG+ L K + + RD +
Sbjct: 123 FSLDPVGGLNEESYFTATGSGSPTAYGVLELEYSRDMLLKDGLNLSVKALMSAMERDAFS 182
Query: 201 VNKLQIAKITEEGTTI 216
N + +A + +EG I
Sbjct: 183 GNGISLAYVNKEGVKI 198
>gi|257053725|ref|YP_003131558.1| Proteasome endopeptidase complex [Halorhabdus utahensis DSM 12940]
gi|302595737|sp|C7NQ99.1|PSB_HALUD RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|256692488|gb|ACV12825.1| Proteasome endopeptidase complex [Halorhabdus utahensis DSM 12940]
Length = 234
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 88/191 (46%), Gaps = 14/191 (7%)
Query: 33 LKYKDGILMAAD----MGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDE 88
L ++G+++A D +GG + S VE I P +L+G+ G F LR+ E
Sbjct: 45 LATEEGVVIATDRRASLGGRFVSNKNVVKVEEIHPTAAMTLVGSVGGAQSFIRTLRS--E 102
Query: 89 LILYDNMWDDGNSLGPKELHSYLTRV-MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
LY+ D+ P +++ T + R F L +LGGV + ++ +
Sbjct: 103 ASLYETRRDE-----PMSINALATLAGNFARGGPF--LAIHPILGGVDDEGSHVYTIDPA 155
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G ED + TG G +A + E+ +LS E+ +L ++ RD + N L IA
Sbjct: 156 GGVMEDDYAVTGSGMQVAYGTIEGEYESDLSTEEAKELATNAVQAASERDTGSGNGLVIA 215
Query: 208 KITEEGTTISQ 218
+IT+EG I +
Sbjct: 216 EITDEGVEIEE 226
>gi|330508619|ref|YP_004385047.1| proteasome subunit beta [Methanosaeta concilii GP6]
gi|328929427|gb|AEB69229.1| proteasome subunit beta [Methanosaeta concilii GP6]
Length = 206
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 97/195 (49%), Gaps = 6/195 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + G+++A++ + GS I ++I I + +G + D Q L+R +
Sbjct: 7 GTTTVGVLCDGGVVLASESRATMGSFIASSQAKKIYQIDDLVGMTTAGGVGDAQSLVRMV 66
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMV 144
E LY G L K + + L ++ +RR + P L++GGV + G + +
Sbjct: 67 QVEARLYK--MQRGEGLTVKAVTTMLANILSSRR--YYPFMVQLIMGGVDRYGPRIYSLD 122
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
++ G E VATG G+ +A +L + +S EDG L + + L RD ++ +K+
Sbjct: 123 ALGGQIEERRIVATGSGSPVAYGVLEAMYKPGISVEDGTVLAARAIHNALKRDSASGDKI 182
Query: 205 QIAKITEEGTTISQP 219
++ +IT++ + +P
Sbjct: 183 ELVRITDKYEEVGEP 197
>gi|429217521|ref|YP_007175511.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429134050|gb|AFZ71062.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 210
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 97/188 (51%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V K+ +++AAD + G+ I ++V++I I ++ + +G ++D Q L +
Sbjct: 15 GTTTVGFITKNAVILAADKRATAGTLIASRTVKKIVKITDYAAMTIAGLVADAQMLADAI 74
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+E LY+ M + L K + + L V+++ K+ P L++GG + + L +
Sbjct: 75 REEARLYETM--NKRKLTVKGMATLLANVLFS--TKYYPYLVQLIVGGY-DTEPRLYNLD 129
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G E+ +TG G+ +A +L ++ +LS E+ + L K ++V + RD + + +
Sbjct: 130 YFGSITEEKMTSTGSGSPVALGVLEKDYRPDLSLEEAMNLAAKAIKVAIMRDSATGDGVD 189
Query: 206 IAKITEEG 213
+ I+ G
Sbjct: 190 VIAISSGG 197
>gi|145592407|ref|YP_001154409.1| proteasome endopeptidase complex protein [Pyrobaculum arsenaticum
DSM 13514]
gi|302595720|sp|A4WMZ0.1|PSB2_PYRAR RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|145284175|gb|ABP51757.1| Proteasome endopeptidase complex [Pyrobaculum arsenaticum DSM
13514]
Length = 203
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 87/173 (50%), Gaps = 7/173 (4%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G + V +K KDG+++AA+ SYG + ++ I + ++G I+D Q L R +
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGRKVFVIDDKLAIASAGIIADMQSLARIV 67
Query: 87 DELILYDNMWDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+ ++ P + + L+ +M++RR + P + +++GGV +L ++
Sbjct: 68 K---INAKAYELETRKKPTVRSMAKLLSVIMFSRR--YMPFFAEVLVGGVDEEGSHLIVM 122
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+G ED++ A G G LA +L + E+++ +D KL K ++ + RD
Sbjct: 123 DPLGSLIEDNYAALGTGAKLAISVLDTGYREDITLQDAKKLAVKALKAAIERD 175
>gi|347522758|ref|YP_004780328.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459640|gb|AEM38076.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 211
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 90/177 (50%), Gaps = 9/177 (5%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y G + V ++ KDG+++A++ SYG I K+ +++ + + +G +D Q L
Sbjct: 6 YGIGATTVGIRVKDGVVLASEKRVSYGGFIVSKAGKKVFKVTDRIGIAFAGLYADMQALA 65
Query: 84 RNLDELILYDNMWDDGNSLGPKELHS---YLTRVMYNRRNKFDPLWNSLVLGGVKNGQKY 140
R L I Y + ++ P +++ L+ ++Y +K P +++GGV +
Sbjct: 66 RILSAEIQYYEV----STGKPARVYAAAKLLSNILYA--SKLIPFITEVLVGGVDETGSH 119
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
L ++ +G ED + A G G +A IL + +++S ++ +L EK +R+ + RD
Sbjct: 120 LYVMDPVGSVIEDDYAALGSGAAIAIGILEANYRKDMSIDEAKELAEKAVRIAIERD 176
>gi|327311458|ref|YP_004338355.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326947937|gb|AEA13043.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 199
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 93/186 (50%), Gaps = 3/186 (1%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
T+ V +K +DG+++A D + G I +K E+I I +H SG ++D Q LL L
Sbjct: 2 TTTVGIKARDGVVLATDKRVTAGYYIAHKRGEKIWKIDEHVAATMSGGVADLQGLLSTL- 60
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
++ D + + K L +Y + +++ R + + + GG + L M+ +
Sbjct: 61 TILARDYKTEHRRPIPVKTLVNYASLLLFYSRPVIYIVHS--IFGGFDDEGPQLYMLDWL 118
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G E+ +++TG G+ A +L + E+++ ++ VKL E ++ + D + + I
Sbjct: 119 GSYSEERYISTGSGSPYAMGVLEVGYREDMTVDEAVKLAENAVKAAMRNDPGSGEGIDIV 178
Query: 208 KITEEG 213
IT++G
Sbjct: 179 TITKDG 184
>gi|448733676|ref|ZP_21715918.1| proteasome beta subunit [Halococcus salifodinae DSM 8989]
gi|445802196|gb|EMA52503.1| proteasome beta subunit [Halococcus salifodinae DSM 8989]
Length = 237
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 7/182 (3%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD-ELILYDN 94
+G+++A D S G+ + K E+I I L SG +S Q L+ NL E+ LY+
Sbjct: 52 SEGVVLATDRRASAGNMVASKQAEKIAEIHPRGALTISGAVSAAQALISNLKAEVDLYEA 111
Query: 95 MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDS 154
G + + L + + R F VLGGV + ++ + + G E+
Sbjct: 112 RR--GEEMSMQALSTLTGNFL--RSGAF--FIVQPVLGGVDDEGSHIYRIDIGGSVMEED 165
Query: 155 HVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGT 214
+ +G G+ A +L E+ + LS ++ + + ++ + RD ++ N + ++++TEEG
Sbjct: 166 YAVSGSGSPFALGVLEQEYDDGLSMDEAETVAARAVKSAVERDTASGNGITLSEVTEEGV 225
Query: 215 TI 216
TI
Sbjct: 226 TI 227
>gi|374724463|gb|EHR76543.1| proteasome, beta component (T1A subfamily) [uncultured marine group
II euryarchaeote]
Length = 208
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 8/188 (4%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGTS + + + G+++ AD + G I KSV+++ IG + L +G + Q L R
Sbjct: 12 TGTSTLGITFDGGVVVGADHRATMGHFIANKSVQKLFKIGDNLALTTAGLVGHAQSLSRT 71
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L E+ L+ + K ++ ++ R P W L++ GV + ++ +
Sbjct: 72 LAAEVSLFQ--LRRQQQMTVKGAATFTANILAGR-----PHWVQLLIVGVDDEGGHVYSI 124
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + DS+ ATG G+ +L D + E ++ D +KL + + RD ++ N +
Sbjct: 125 DSAGGSIPDSYCATGSGSPYMYGVLEDGFSEGMTRTDALKLAARALHASGQRDAASGNGM 184
Query: 205 QIAKITEE 212
+A IT +
Sbjct: 185 DLAVITAK 192
>gi|448385292|ref|ZP_21563798.1| proteasome endopeptidase complex subunit beta [Haloterrigena
thermotolerans DSM 11522]
gi|445656787|gb|ELZ09619.1| proteasome endopeptidase complex subunit beta [Haloterrigena
thermotolerans DSM 11522]
Length = 234
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 14/185 (7%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
+G+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY
Sbjct: 49 EGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRA--EVNLY 106
Query: 93 DNMWDDGNSLGPKELHSYLTRV-MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
++ D+ P + + T + R F + + +LGGV + ++ + G
Sbjct: 107 ESRRDE-----PMPIEALATLAGNFARGGPFRAI--NPILGGVDSEGSHVYSIDPAGGVM 159
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
D + TG G LA +L E+ ++LS D + + ++ + RD + N + +A++T
Sbjct: 160 ADDYTVTGSGMQLAYGLLEQEYEDDLSLADAKSVAARAIKSAVERDTGSGNGVFLAEVTG 219
Query: 212 EGTTI 216
EG I
Sbjct: 220 EGVDI 224
>gi|67621564|ref|XP_667771.1| proteasome B type subunit [Cryptosporidium hominis TU502]
gi|54658945|gb|EAL37551.1| proteasome B type subunit [Cryptosporidium hominis]
Length = 210
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 90/189 (47%), Gaps = 3/189 (1%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++VALKYK G+++AAD S G I +++ +I I + SG +D Q + R
Sbjct: 12 TGTTIVALKYKHGLVLAADGRTSTGPIIAFRAARKITQITDKVFMCRSGSAADTQIISRY 71
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ I+ D+ + G K + S + Y +NK L + ++ G NG+ + +
Sbjct: 72 VRR-IVQDHELETGEDTKVKSVASVARLISY--QNKEHLLADMIIAGMDPNGEFKVFRIP 128
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
+ G E S+ +G G+ +L ++H + ++ + ++RD S+ ++
Sbjct: 129 LGGTLIEGSYAISGSGSGYIYSMLDSKYHSEMDLDECKSFARDLVSHAMFRDSSSGGIIR 188
Query: 206 IAKITEEGT 214
I I + G
Sbjct: 189 IIVIDKSGV 197
>gi|449706066|gb|EMD45988.1| proteasome subunit beta type 4 precursor, putative [Entamoeba
histolytica KU27]
Length = 87
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 48/79 (60%)
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
M G +F +++VA+G G H+A P+LR EW +++S E+ L+E+CM++L A N+
Sbjct: 1 MYGTSFTENYVASGIGAHMAMPLLRKEWKDHMSREEAEHLIERCMKILYLNHCWAGNQYL 60
Query: 206 IAKITEEGTTISQPYALKT 224
+ + EG+ I P + T
Sbjct: 61 LGVVDSEGSDIIGPITIDT 79
>gi|229582084|ref|YP_002840483.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
gi|302595759|sp|C3NHF1.1|PSB2_SULIN RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|228012800|gb|ACP48561.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.N.15.51]
Length = 211
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K DG+++AAD S G + K V ++ I + +G ++D Q + L
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
+ Y+N+ G + K + + L V+ K+ P +++GG + Q L +
Sbjct: 77 KNIYHYNNITKYG-PISIKGIATRLANVL--SATKYFPYIVQILIGGYDD-QPRLFNLDY 132
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
+G E+++VATG G+ +A +L DE++ ++ ++ L ++ + + RD + +
Sbjct: 133 LGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIV 192
Query: 207 AKITEEG 213
AKI +G
Sbjct: 193 AKIHSKG 199
>gi|170291074|ref|YP_001737890.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595814|sp|B1L6X8.1|PSB2_KORCO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170175154|gb|ACB08207.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 198
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 96/189 (50%), Gaps = 6/189 (3%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
+ + L++ G+++AAD SY I KS ++ I + + +G DFQEL+ L
Sbjct: 4 ATALGLRFDGGVVLAADRRVSYNGFILSKSARKVFLINERVGVSTAGLPGDFQELVDVLK 63
Query: 88 -ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNS-LVLGGVKNGQKYLGMVS 145
+ +Y+ ++ + P + L+ ++Y R F ++ + LV+GG+ N + ++
Sbjct: 64 YNITMYE--LENEKAATPTNVAKLLSILLYQGR--FSGIYYAELVVGGIDNSGPKIFVLD 119
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G E++ A G G +A IL + E +S ++ V+L E+ MR + RD + + +
Sbjct: 120 PAGGLMEENFSAVGSGAQIATGILERFFKEGMSEKEAVELAERAMREAISRDALSGDGID 179
Query: 206 IAKITEEGT 214
+ IT +G+
Sbjct: 180 LLIITSKGS 188
>gi|448681225|ref|ZP_21691358.1| proteasome subunit beta [Haloarcula argentinensis DSM 12282]
gi|445767758|gb|EMA18851.1| proteasome subunit beta [Haloarcula argentinensis DSM 12282]
Length = 230
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 13 PNDPIQRTQLPYV-TGTSVVALKYKDGILMAAD----MGGSYGSTIRYKSVERIKPIGKH 67
PN+ R + V TGT+ V L ++G+++A D +GG + S + + VE+I P
Sbjct: 20 PNEDGGRDEENVVKTGTTTVGLSTENGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAM 79
Query: 68 SLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
+L+G+ G F LR E LY+ D+ P +H+ T + + P +
Sbjct: 80 TLVGSVGGAQSFIRSLRA--EADLYEVRRDE-----PLSIHALAT--LAGNFARGGPYFA 130
Query: 128 -SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
+ ++GGV ++ V G ED + TG G +A + ++ +S + L
Sbjct: 131 INPIVGGVDEEGSHVYSVDPAGGVLEDDYTVTGSGTMVATGTIEGQYDPEMSLSEARDLA 190
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTI 216
+ + RD + N + +A+IT+EG I
Sbjct: 191 IRAVNAAAERDTGSGNGVVLAEITDEGVEI 220
>gi|70606695|ref|YP_255565.1| proteasome beta subunit [Sulfolobus acidocaldarius DSM 639]
gi|449066918|ref|YP_007434000.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449069190|ref|YP_007436271.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
gi|121725055|sp|Q4JAA8.1|PSB2_SULAC RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|68567343|gb|AAY80272.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius DSM
639]
gi|449035426|gb|AGE70852.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius N8]
gi|449037698|gb|AGE73123.1| proteasome beta subunit precursor [Sulfolobus acidocaldarius
Ron12/I]
Length = 203
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 97/197 (49%), Gaps = 4/197 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K KDG+++AAD S G + +K V ++ + + + +G ++D Q + L
Sbjct: 10 GTTTVGIKVKDGVVLAADRRASAGYYVAHKYVRKVLYVTDNIGITTAGSVADLQFIYEAL 69
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
+ I + N + K + ++L V+ +K+ P +++GGV + Q L +
Sbjct: 70 -KYIYHRNSITGEGPITVKGIATWLANVL--SSSKYFPYLVQILIGGVDD-QPRLYNLDY 125
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
+G E+ + ATG G+ A +L D + +S ++ +L ++ + + RD + +
Sbjct: 126 LGDITEEEYTATGSGSPEALGVLEDNYKPEMSLDEAAELAKRAIFSSIKRDSFTGTGVIV 185
Query: 207 AKITEEGTTISQPYALK 223
KIT+ G + Y K
Sbjct: 186 TKITKNGHEEKEYYITK 202
>gi|57641364|ref|YP_183842.1| proteasome subunit beta [Thermococcus kodakarensis KOD1]
gi|74502448|sp|Q5JDJ9.1|PSB1_PYRKO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|57159688|dbj|BAD85618.1| proteasome, beta subunit [Thermococcus kodakarensis KOD1]
Length = 203
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 87/188 (46%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KDG+++AAD S G+ + + V ++ I H + +G + D L+R L
Sbjct: 7 GTTTVGIVCKDGVVLAADRRASLGNMVLSERVTKVFQIDDHLAIAGAGTVGDILSLVRLL 66
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY + K L + + ++++ R W ++GG + + + +
Sbjct: 67 RAEAKLYRAKVS--REMSVKALATLTSNILHSGRGFAYMAW--FLVGGYDSAPRLYSIDA 122
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
GV ED A G G A +L + + + + E+GVKL + ++ RD +
Sbjct: 123 AGGVT-EDRFTAAGSGMEFAFSVLEENYRDGIPLEEGVKLALRAIKAATKRDVFTGGGVT 181
Query: 206 IAKITEEG 213
+ ITEEG
Sbjct: 182 LVTITEEG 189
>gi|147919477|ref|YP_686783.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
gi|121685330|sp|Q0W2D6.1|PSB_UNCMA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|110622179|emb|CAJ37457.1| 20S proteasome, beta subunit [Methanocella arvoryzae MRE50]
Length = 208
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ + + G+++A + + G+ I + ++I I ++ + +G + D Q L R L
Sbjct: 9 GTTTIGIICDQGVVLATERRATMGNFIASRDAQKIYRITDNAAMTIAGSVGDGQRLARIL 68
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMV 144
E L++ S+ L L+ ++ R + P + +++GG+ K G K +
Sbjct: 69 QVEAKLFE--LRRHGSMSINALSMLLSNILAEMR--YAPYYVQVLIGGLDKAGPKIYSLD 124
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+ G E+ V+TG G+ +A +L D + +S E+GV+L + + + RD ++ N +
Sbjct: 125 PLGGRIEEEKFVSTGSGSPIAYGVLEDRYKPGMSVEEGVELAARALESAMKRDSASGNGM 184
Query: 205 QIAKITEE 212
Q IT E
Sbjct: 185 QFCVITAE 192
>gi|448685100|ref|ZP_21693110.1| proteasome subunit beta [Haloarcula japonica DSM 6131]
gi|445782303|gb|EMA33150.1| proteasome subunit beta [Haloarcula japonica DSM 6131]
Length = 230
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 13 PNDPIQRTQLPYV-TGTSVVALKYKDGILMAAD----MGGSYGSTIRYKSVERIKPIGKH 67
PN+ R + V TGT+ V L ++G+++A D +GG + S + + VE+I P
Sbjct: 20 PNEDGGRDEENVVKTGTTTVGLSTENGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAM 79
Query: 68 SLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
+L+G+ G F LR E LY+ D+ P +H+ T + + P +
Sbjct: 80 TLVGSVGGAQSFIRSLRA--EADLYEVRRDE-----PLSIHALAT--LAGNFARGGPYFA 130
Query: 128 -SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
+ ++GGV ++ V G ED + TG G +A + ++ +S + L
Sbjct: 131 INPIVGGVDEEGSHVYSVDPAGGVLEDDYTVTGSGTMVATGTIEGQYDPEMSLSEARDLA 190
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTI 216
+ + RD + N + +A+IT+EG I
Sbjct: 191 IRAVNAAAERDTGSGNGVVLAEITDEGVEI 220
>gi|448630993|ref|ZP_21673448.1| proteasome subunit beta [Haloarcula vallismortis ATCC 29715]
gi|445755367|gb|EMA06757.1| proteasome subunit beta [Haloarcula vallismortis ATCC 29715]
Length = 230
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 13 PNDPIQRTQLPYV-TGTSVVALKYKDGILMAAD----MGGSYGSTIRYKSVERIKPIGKH 67
PN+ R + V TGT+ V L ++G+++A D +GG + S + + VE+I P
Sbjct: 20 PNEDGGRDEENVVKTGTTTVGLSTENGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAM 79
Query: 68 SLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
+L+G+ G F LR E LY+ D+ P +H+ T + + P +
Sbjct: 80 TLVGSVGGAQSFIRSLRA--EADLYEVRRDE-----PLSIHALAT--LAGNFARGGPYFA 130
Query: 128 -SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
+ ++GGV ++ V G ED + TG G +A + ++ +S + L
Sbjct: 131 INPIVGGVDEEGSHVYSVDPAGGVLEDDYTVTGSGTMVATGTIEGQYDPEMSLSEARDLA 190
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTI 216
+ + RD + N + +A+IT+EG I
Sbjct: 191 IRAVNAAAERDTGSGNGVVLAEITDEGVEI 220
>gi|124028413|ref|YP_001013733.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
gi|302595715|sp|A2BN27.1|PSB2_HYPBU RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|123979107|gb|ABM81388.1| proteasome beta precursor [Hyperthermus butylicus DSM 5456]
Length = 212
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 93/189 (49%), Gaps = 4/189 (2%)
Query: 21 QLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQ 80
QL + GT+ V + ++D +++AAD + G + +K ++I I + + +G ++D Q
Sbjct: 9 QLRALKGTTTVGIVFRDFVVLAADRRATAGYFVAHKRTKKIIKITDYMAMTTAGLVADAQ 68
Query: 81 ELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKY 140
L L Y + + + YL+ ++++ KF P L+LGG + Q
Sbjct: 69 MLAEWLANHTHYYEIVNK-RRMSIHAAAQYLSIILHS--AKFYPYIVQLLLGGY-DTQPR 124
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
L + G E+ +VATG G+ A ++ D++ NLS E+ V+L ++ + + RD
Sbjct: 125 LYNIDWFGSVTEEKYVATGSGSPTAIGVIEDQYSPNLSMEEAVELAKRAVASSIRRDTFT 184
Query: 201 VNKLQIAKI 209
N + + I
Sbjct: 185 GNGVDVVVI 193
>gi|354610751|ref|ZP_09028707.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
gi|353195571|gb|EHB61073.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
Length = 239
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 84/186 (45%), Gaps = 13/186 (6%)
Query: 37 DGILMAAD----MGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++AAD +GG + R + VE++ P L GA G I F LL+ E LY
Sbjct: 55 DGVVLAADRRASLGGRLVTNKRTQKVEQLHPTAAAGLSGAVGHIQQFVRLLQA--EARLY 112
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+N + EL + + PL + +LGGV ++ + G
Sbjct: 113 ENRRSE-------ELTMTALSTLAGNVLRSAPLQVTPLLGGVDEDGGHVFSLDGGGGVLS 165
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D++ A G G +A +L ++ + LS ++G + + + RD ++ N L +A IT E
Sbjct: 166 DTYAAGGSGMQIAYGVLEQQYDDALSAKEGRAVAAQAIDSASERDTASGNGLTVATITSE 225
Query: 213 GTTISQ 218
G +
Sbjct: 226 GVAFDE 231
>gi|156543654|ref|XP_001607442.1| PREDICTED: proteasome subunit beta type-7 [Nasonia vitripennis]
Length = 277
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 10/205 (4%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQ---EL 82
TGT++V + YKDG+++ AD + GS + K E+I + K+ +G +D + E+
Sbjct: 38 TGTTIVGIIYKDGVILGADTRATEGSIVADKKSEKIHYLAKNMYCCGAGTAADTEMTTEM 97
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
+ + EL + + G + L ++++ + + +L++GGV N +L
Sbjct: 98 ISSQLEL----HRLNTGRIVPVVTASKLLKQLLFRHQGH---IGAALIVGGVDNSGPHLY 150
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ G + G G+ A + W +S E+G +L+ +R ++ D + N
Sbjct: 151 CIYPHGSCDTLQYTTMGSGSLAAMSVFESRWKPGMSEEEGKELVADAIRAGVFNDLGSGN 210
Query: 203 KLQIAKITEEGTTISQPYALKTFWG 227
+ + I + T +PY L G
Sbjct: 211 SVDVCVIRKGSTDYIRPYELSCVKG 235
>gi|209878736|ref|XP_002140809.1| proteasome subunit beta type 6 precursor [Cryptosporidium muris
RN66]
gi|209556415|gb|EEA06460.1| proteasome subunit beta type 6 precursor, putative [Cryptosporidium
muris RN66]
Length = 213
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 98/191 (51%), Gaps = 7/191 (3%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+TGT++VALK +DG+++AAD S G+ + +S +I I + SG SD Q +++
Sbjct: 14 MTGTTLVALKCRDGLILAADSRTSMGNMVVSRSARKITRITDKIFICRSGSASDTQTIVQ 73
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK--NGQKYLG 142
+ +L D+ + G K + S L R++ + ++ L L++ GV +G K
Sbjct: 74 YVRKLTA-DHELELGEEARVKSVAS-LARIICYQNKEY--LTAGLIVAGVDPYDGFKIF- 128
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+++ G E S+ +G G+ +L +H N+ ++ + + ++RD S+
Sbjct: 129 QIALGGSMIEKSYALSGSGSAYIYSLLDATYHTNMDIDECKDFARRLVSHAIFRDSSSGG 188
Query: 203 KLQIAKITEEG 213
+++ IT+EG
Sbjct: 189 LIRMVIITKEG 199
>gi|448652124|ref|ZP_21681137.1| proteasome subunit alpha [Haloarcula californiae ATCC 33799]
gi|445769527|gb|EMA20601.1| proteasome subunit alpha [Haloarcula californiae ATCC 33799]
Length = 230
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 13 PNDPIQRTQLPYV-TGTSVVALKYKDGILMAAD----MGGSYGSTIRYKSVERIKPIGKH 67
PN+ R + V TGT+ V + ++G+++A D +GG + S + + VE+I P
Sbjct: 20 PNEDGGRDEENVVKTGTTTVGISTENGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAM 79
Query: 68 SLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
+L+G+ G F LR E LY+ D+ P +H+ T + + P +
Sbjct: 80 TLVGSVGGAQSFIRSLRA--EADLYEVRRDE-----PLSIHALAT--LAGNFARGGPYFA 130
Query: 128 -SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
+ ++GGV ++ V G ED + TG G +A + ++ +S + L
Sbjct: 131 INPIVGGVDEEGSHVYSVDPAGGVLEDDYTVTGSGTMVATGTIEGQYDHGMSLSEARDLA 190
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTI 216
+ + RD + N + +A+IT+EG I
Sbjct: 191 IRAVNAAAERDTGSGNGVVLAEITDEGVEI 220
>gi|448351963|ref|ZP_21540757.1| proteasome endopeptidase complex subunit beta [Natrialba
taiwanensis DSM 12281]
gi|445632523|gb|ELY85735.1| proteasome endopeptidase complex subunit beta [Natrialba
taiwanensis DSM 12281]
Length = 243
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 36 KDGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELIL 91
+DG+++A DM GG + S + VE+I P G +++G+ G F LR E+ L
Sbjct: 57 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTMVGSVGGAQSFISSLRA--EVNL 114
Query: 92 YDNMWDDGNSLGPKELHSYLTRV-MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVN 150
Y+ D P + + T + R F + +LGGV + ++ + G
Sbjct: 115 YEARRGD-----PMSIDALATLAGNFARGGPFFAIHP--ILGGVDSEGSHVYSIDPAGGV 167
Query: 151 FEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKIT 210
ED + TG G LA +L E+ + L+ +D + + ++ RD + N + + +IT
Sbjct: 168 MEDDYTVTGSGMQLAYGLLEQEYEDGLANDDATTIAARAIKSAAERDTGSGNGVFLCEIT 227
Query: 211 EEGTTIS 217
+EG I+
Sbjct: 228 DEGVEIN 234
>gi|432331212|ref|YP_007249355.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
gi|432137921|gb|AGB02848.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanoregula formicicum SMSP]
Length = 213
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 97/197 (49%), Gaps = 11/197 (5%)
Query: 21 QLP-YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
QLP + GT+ + + + DG+++A + + G I K +++ + + +G + D
Sbjct: 4 QLPESMKGTTTIGIVFADGVILATEKRATMGLMIASKKAKKVYQVADRIGMTTAGGVGDA 63
Query: 80 QELLRNLD-ELILYDNMWDDGNSLGPKE--LHSYLTRVMYNRRNKFDPLWNSLVLGGV-K 135
Q+L R L+ E LY ++G L +YL +N++ P + L++GGV +
Sbjct: 64 QQLARILNVECNLYQIRRSRPITVGATATLLSNYLN------QNRYFPYYVQLLVGGVDE 117
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLY 195
G + +M G E+ VATG G+ +A +L D + ++ E +++ + ++ +
Sbjct: 118 KGPSVYSVDAMGGATKEEEIVATGSGSPMAYGVLEDRYKPGMTEEMAIEIAVRGLKSAMK 177
Query: 196 RDRSAVNKLQIAKITEE 212
RD + + + IT++
Sbjct: 178 RDAGSGEGIHVVAITKD 194
>gi|242000314|ref|XP_002434800.1| proteasome beta2 subunit, putative [Ixodes scapularis]
gi|215498130|gb|EEC07624.1| proteasome beta2 subunit, putative [Ixodes scapularis]
Length = 278
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + +KDG+++ AD + GS I K+ +I + + +G +D E N
Sbjct: 39 TGTTIVGIIFKDGVILGADTRATSGSIIADKNCAKIHYMAPNIYCCGAGTAAD-TEKTTN 97
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + G ++ + L ++++ + +LVLGGV N L +
Sbjct: 98 MISSQLELHRLATGRTVPVCTANRMLKQMLFRYQGHISA---ALVLGGVDNTGGVLCCIH 154
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G +V G G+ A + +W +++ E+G K++ + ++ D + + +
Sbjct: 155 PHGSTDRLPYVTMGSGSLAAMAVFERDWKPDMTLEEGKKVVRNAIAAGIFNDLGSGSNVD 214
Query: 206 IAKITEEGTTISQPY 220
I IT EG +PY
Sbjct: 215 ICVITREGKDYIRPY 229
>gi|170291023|ref|YP_001737839.1| proteasome endopeptidase complex protein [Candidatus Korarchaeum
cryptofilum OPF8]
gi|302595829|sp|B1L6S7.1|PSB1_KORCO RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|170175103|gb|ACB08156.1| Proteasome endopeptidase complex [Candidatus Korarchaeum
cryptofilum OPF8]
Length = 206
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 92/188 (48%), Gaps = 5/188 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K+K+G+++A+D + G+ + KS + I +++ SG ++D Q L+ N+
Sbjct: 5 GTTTVGVKFKNGVIVASDKRATSGTFVASKSAVKTLKITDYAVATISGLVADGQYLVNNV 64
Query: 87 DELI-LYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ LY D L + + L ++ R F L L++GGV +L V
Sbjct: 65 RTIADLYS--LDTERPLSVRGIARILAFLLRRYRPYF--LLAQLIVGGVDREGAHLFNVD 120
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G E+ ++ATG G+ +A ++ + ++ E ++L+ M L RD + + +
Sbjct: 121 PFGTLTEEDYLATGSGSPVAISVIESGYSPDMDRESALRLVISSMTAALSRDAATGDGID 180
Query: 206 IAKITEEG 213
+ I + G
Sbjct: 181 VVVIDDRG 188
>gi|88602139|ref|YP_502317.1| proteasome endopeptidase complex [Methanospirillum hungatei JF-1]
gi|121724010|sp|Q2FQL8.1|PSB_METHJ RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|88187601|gb|ABD40598.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Methanospirillum hungatei
JF-1]
Length = 209
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + ++ G+++A++ + G I K+ ++I I L +G + D Q+L R +
Sbjct: 10 GTTTVGIVFETGVVLASEKRATMGYLISNKTAKKIYQIAPRIGLTTAGGVGDAQQLARLM 69
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY+ G + + + L+ +++ N+ P + L++GGV L V
Sbjct: 70 TVEANLYE--IRRGKRISVQAASTLLSNILHG--NRMFPFYVQLLIGGVDETGPVLFSVD 125
Query: 146 MIG-VNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G ED VATG G+ +A +L D + + ++L + +R + RD + +
Sbjct: 126 AVGGTGKEDGIVATGSGSPMAYGVLEDRYTLGMDERSAIELAIRALRSAIKRDAGSGEGV 185
Query: 205 QIAKITEE 212
+ ITE+
Sbjct: 186 AVVVITED 193
>gi|448346436|ref|ZP_21535321.1| proteasome endopeptidase complex subunit beta [Natrinema altunense
JCM 12890]
gi|445632639|gb|ELY85850.1| proteasome endopeptidase complex subunit beta [Natrinema altunense
JCM 12890]
Length = 239
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 87/185 (47%), Gaps = 14/185 (7%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
+G+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY
Sbjct: 54 EGVVIATDMRASLGGRFVSNKDVQKVEQIHPTGALTLVGSVGGAQSFIRTLRA--EVNLY 111
Query: 93 DNMWDDGNSLGPKELHSYLTRV-MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
++ D+ P + + T + R F + + +LGGV ++ + G
Sbjct: 112 ESRRDE-----PMPIEALATLAGNFARGGPFRAI--NPILGGVDAEGSHVYSIDPAGGVM 164
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
D + TG G LA +L E+ ++LS E + + + + RD + N + +A IT+
Sbjct: 165 ADDYTVTGSGMQLAYGLLEQEYEDDLSLEAAQSVAARAIESAVERDTGSGNGVFLAAITD 224
Query: 212 EGTTI 216
EG I
Sbjct: 225 EGVDI 229
>gi|344212556|ref|YP_004796876.1| proteasome subunit beta [Haloarcula hispanica ATCC 33960]
gi|343783911|gb|AEM57888.1| proteasome subunit beta [Haloarcula hispanica ATCC 33960]
Length = 230
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 97/210 (46%), Gaps = 15/210 (7%)
Query: 13 PNDPIQRTQLPYV-TGTSVVALKYKDGILMAAD----MGGSYGSTIRYKSVERIKPIGKH 67
PN+ R + V TGT+ V + ++G+++A D +GG + S + + VE+I P
Sbjct: 20 PNEDGGRDEENVVKTGTTTVGISTENGVIIATDRRASLGGRFVSNKQVQKVEQIHPTAAM 79
Query: 68 SLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
+L+G+ G F LR E LY+ D+ P +H+ T + + P +
Sbjct: 80 TLVGSVGGAQSFIRSLRA--EADLYEVRRDE-----PLSIHALAT--LAGNFARGGPYFA 130
Query: 128 -SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
+ ++GGV ++ V G ED + TG G +A + ++ +S + L
Sbjct: 131 INPIVGGVDEEGSHVYSVDPAGGVLEDDYTVTGSGTMVATGTIEGQYDPEMSLSEARNLA 190
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTI 216
+ + RD + N + +A+IT+EG I
Sbjct: 191 IRAVNAAAERDTGSGNGVVLAEITDEGVEI 220
>gi|440300991|gb|ELP93438.1| proteasome subunit beta type-2-A, putative [Entamoeba invadens IP1]
Length = 219
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 29 SVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDE 88
S V + KD +L A D GS I + +I P+ + L+ GE +D Q L +
Sbjct: 24 SSVGIVGKDFVLFATDGSSGRGSIIVKNDLNKIYPLQGNRLMAIVGEANDRQALADFVQR 83
Query: 89 LILYDNMWDDGNSLGPKELHSYLTRVMYN--RRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
I N + +G + ++ + M R+ K+ S+++GGV + L +V
Sbjct: 84 NIAL-NYYRNGLKSTTSSVAHWVRQEMSENLRKGKYQC---SVLIGGVDEAPE-LYLVDQ 138
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCM-----RVLLYRDRSAV 201
+G ++++ A G G+H +L WH+++ Y++ ++LLEKC+ RVL+ V
Sbjct: 139 LGALVQENYAAHGVGSHFVLALLDKHWHQDMEYQEALQLLEKCIDEIKRRVLVSSSEYCV 198
Query: 202 NKLQIAKITEEGTTISQP 219
A ++ TI P
Sbjct: 199 E----ACFKDKTVTIKGP 212
>gi|448329985|ref|ZP_21519279.1| proteasome endopeptidase complex subunit beta [Natrinema versiforme
JCM 10478]
gi|445613173|gb|ELY66883.1| proteasome endopeptidase complex subunit beta [Natrinema versiforme
JCM 10478]
Length = 238
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 87/176 (49%), Gaps = 8/176 (4%)
Query: 41 MAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGN 100
M A +GG + S + VE+I P G +L+G+ G F LR+ E+ LY++ G
Sbjct: 61 MRASLGGRFVSNKDVQKVEQIHPTGALTLVGSVGGAQSFIRTLRS--EVNLYESRR--GE 116
Query: 101 SLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGF 160
++ P E + L + R F + + +LGGV + ++ + G D + TG
Sbjct: 117 TM-PIEALATLAG-NFARGGPFRAI--NPILGGVDSEGSHVYSIDPAGGVMADDYTVTGS 172
Query: 161 GNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTI 216
G LA +L E+ E LS ++ + + ++ + RD + N + +A++TEEG I
Sbjct: 173 GMQLAYGLLEQEYEEGLSLDEAQSVAARAIKSAVERDTGSGNGVFLAEVTEEGVDI 228
>gi|11498092|ref|NP_069317.1| proteasome subunit beta [Archaeoglobus fulgidus DSM 4304]
gi|17380266|sp|Q9P996.1|PSB_ARCFU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|2650155|gb|AAB90757.1| proteasome, subunit beta (psmB) [Archaeoglobus fulgidus DSM 4304]
Length = 213
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L KDG++MA + + G+ I K+ ++I I + +G + D Q L R +
Sbjct: 11 GTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARII 70
Query: 87 DELILYDNMWDDGNSLGPK-ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ N+++ P + LT + N F P L++GG+ + K + +
Sbjct: 71 K---IEANLYEIRRERKPTVRAIATLTSNLLNSYRYF-PYLVQLLIGGIDSEGKSIYSID 126
Query: 146 MIGVNFEDSH-VATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
IG E+ VATG G+ A +L D + + ++ V+L + + + RD ++ + +
Sbjct: 127 PIGGAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGI 186
Query: 205 QIAKITEE 212
+ KITE+
Sbjct: 187 DVVKITED 194
>gi|315231929|ref|YP_004072365.1| proteasome subunit beta [Thermococcus barophilus MP]
gi|315184957|gb|ADT85142.1| proteasome subunit beta [Thermococcus barophilus MP]
Length = 181
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 6/170 (3%)
Query: 45 MGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL-DELILYDNMWDDGNSLG 103
M + G+ + K+V +I I +H L +G + D L+R L E LY G +
Sbjct: 1 MRATIGNMVMSKNVTKIFQIDEHLALAGAGNVGDILSLVRMLRAETKLYRARV--GREMS 58
Query: 104 PKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNH 163
K L + ++ K+ P + ++GG + + L V M G ED +V+ G G
Sbjct: 59 VKALATLTANILNG--TKYFPYFGWFLIGGY-DEKPNLYSVDMAGGMTEDKYVSAGSGME 115
Query: 164 LARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEG 213
A +L +E+ E++S ++GVKL K + + RD + + + KIT+EG
Sbjct: 116 FAYAVLENEYKEDMSVDEGVKLAVKAINTAIKRDVFTGDGILVVKITKEG 165
>gi|225712736|gb|ACO12214.1| Proteasome subunit beta type-6 precursor [Lepeophtheirus salmonis]
gi|225712738|gb|ACO12215.1| Proteasome subunit beta type-6 precursor [Lepeophtheirus salmonis]
gi|290462661|gb|ADD24378.1| Proteasome subunit beta type-6 [Lepeophtheirus salmonis]
gi|290561791|gb|ADD38293.1| Proteasome subunit beta type-6 [Lepeophtheirus salmonis]
Length = 227
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR- 84
TGT+++A +YKDG+++AAD S GS + + ++ P+ ++ L SG +D Q + +
Sbjct: 28 TGTTLLACEYKDGVMLAADCRTSRGSLVVNRESNKLTPVSENILCCRSGSAADTQAIAKA 87
Query: 85 ---NLDELILYDNMWDDGNSLGPKELHSYLTR-VMYNRRNKFDPLWNSLVLGG---VKNG 137
NLD +Y+ M + P E +Y+ + + Y R D L +++GG +K G
Sbjct: 88 VRYNLD---MYNVMMGE---TAPVETVAYMFKSICYEYR---DSLTAGILIGGWDKIKGG 138
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
Q Y + + G+ + + G G+ + + +++S E+ LL K + + D
Sbjct: 139 QVY--SIPLGGMCVRQPYTSGGSGSVYLHAFMSANYKKDMSKEECRDLLVKGIASAVEFD 196
Query: 198 RSAVNKLQIAKITEEG 213
S+ + A IT++G
Sbjct: 197 GSSGGSCRWASITKDG 212
>gi|126460611|ref|YP_001056889.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595828|sp|A3MXQ6.1|PSB2_PYRCJ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126250332|gb|ABO09423.1| Proteasome endopeptidase complex [Pyrobaculum calidifontis JCM
11548]
Length = 203
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 87/173 (50%), Gaps = 7/173 (4%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G + V +K K+G+++AA+ SYG + +++ + + ++G I+D Q L + L
Sbjct: 8 GATAVGIKTKEGVVLAAEKRVSYGFYTLSTAGKKVFIVNDRLAIASAGIIADMQTLAKIL 67
Query: 87 DELILYDNMWDDGNSLGPK--ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L ++ P + L+ VM++RR F P + +++GG+ + +L ++
Sbjct: 68 K---LNAKAYELEMKRKPSVHAMAKLLSVVMFSRR--FMPFFAEVLVGGIDDEGPHLIVM 122
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+G ED++ A G G LA I+ + ++S +D KL + ++ L RD
Sbjct: 123 DPLGSLIEDNYAALGTGAKLAIAIIDASYKPDMSLQDAKKLAVQALKAALERD 175
>gi|448365027|ref|ZP_21553597.1| proteasome endopeptidase complex subunit beta [Natrialba aegyptia
DSM 13077]
gi|445656698|gb|ELZ09531.1| proteasome endopeptidase complex subunit beta [Natrialba aegyptia
DSM 13077]
Length = 243
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 14/187 (7%)
Query: 36 KDGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELIL 91
+DG+++A DM GG + S + VE+I P G +++G+ G F LR E+ L
Sbjct: 57 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTMVGSVGGAQSFISSLRA--EVNL 114
Query: 92 YDNMWDDGNSLGPKELHSYLTRV-MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVN 150
Y+ + P + + T + R F + +LGGV + ++ + G
Sbjct: 115 YEARRGE-----PMSIDALATLAGNFARGGPFFAIHP--ILGGVDSEGSHVYSIDPAGGV 167
Query: 151 FEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKIT 210
ED + TG G LA +L E+ + LS +D + + ++ RD + N + + +IT
Sbjct: 168 MEDDYTVTGSGMQLAYGLLEQEYEDGLSNDDATTIAARAIKSAAERDTGSGNGVFLCEIT 227
Query: 211 EEGTTIS 217
+EG I+
Sbjct: 228 DEGVEIN 234
>gi|374633123|ref|ZP_09705490.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
gi|373524607|gb|EHP69484.1| proteasome endopeptidase complex, archaeal, beta subunit
[Metallosphaera yellowstonensis MK1]
Length = 196
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 97/193 (50%), Gaps = 5/193 (2%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
++ + +K +DG+++ A SYG + KS ++ I + +G +G D Q L R ++
Sbjct: 6 STAIGIKVQDGVILGAVRRLSYGGYVLSKSARKVFTISRFG-IGGAGLFGDLQALTRIMN 64
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
I Y ++ +G + + L+ ++Y + K+ P + ++ G+ +G L ++ +
Sbjct: 65 ANIRYYELY-NGRPISARAAAKLLSIILY--QYKYMPFISEVLFAGIDDGTPQLFVLDPL 121
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G +D + A G G +A +L E+ ++++ +L K +R + RD ++ + + +
Sbjct: 122 GSLLDDIYAAVGSGARVAIGVLEAEYKDSMNLTQARELALKSLRASVERDVTSGDGIDLL 181
Query: 208 KITEEGTTISQPY 220
I + G IS+ +
Sbjct: 182 IIDKNG-KISEEF 193
>gi|171185380|ref|YP_001794299.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595731|sp|B1YDJ0.1|PSB2_THENV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|170934592|gb|ACB39853.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 203
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 88/176 (50%), Gaps = 7/176 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
+ G + V ++ KDG+++AA+ SYG + +++ + + ++G I+D Q L
Sbjct: 5 FQVGATAVGIRAKDGVVLAAEKRVSYGFYTLSTAGKKVFIVNDKLAIASAGIIADMQALA 64
Query: 84 RNLDELILYDNMWDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYL 141
+ L L ++ P K + L+ VM++RR F P + +++GGV +L
Sbjct: 65 KILK---LNARSYELEVKKKPTVKAMAKLLSVVMFSRR--FMPFYAEVLVGGVDEEGPHL 119
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
++ +G ED++ A G G LA +L + +++ E+ KL + ++ + RD
Sbjct: 120 IVMDPLGSLIEDNYAALGTGAKLAVSLLDASYRPDMTVEEAKKLAVQAVKAAIERD 175
>gi|350525853|ref|YP_002582771.2| proteasome subunit beta [Thermococcus sp. AM4]
gi|345650672|gb|EEB74119.2| Proteasome subunit beta [Thermococcus sp. AM4]
Length = 194
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 6/194 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + +DG+++AAD + G+ + K V ++ + H + +G + D L+R L
Sbjct: 3 GTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQVDDHLAIAGAGLVGDILSLVRLL 62
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY G + K + + ++ V++ R + P + ++GG + + +
Sbjct: 63 RAEAKLYRARV--GREMSVKAMATLVSNVLHGSR--YLPYFAWFLIGGYDVRPRLYSIDA 118
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
GV E+ +A G G A +L + + + + E+GV L + ++ + RD +
Sbjct: 119 AGGVT-EERFIAAGSGMEFALALLEENFSDGMDLEEGVDLAVRAVKAAMRRDVYTGEGVT 177
Query: 206 IAKITEEGTTISQP 219
+ IT+EG +P
Sbjct: 178 VVTITKEGYRELEP 191
>gi|385773318|ref|YP_005645884.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
HVE10/4]
gi|385775950|ref|YP_005648518.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323474698|gb|ADX85304.1| Proteasome endopeptidase complex [Sulfolobus islandicus REY15A]
gi|323477432|gb|ADX82670.1| proteasome endopeptidase complex [Sulfolobus islandicus HVE10/4]
Length = 211
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K DG+++AAD S G + K V ++ I + +G ++D Q + L
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYNVL 76
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
+ Y+++ G + K + + L V+ K+ P +++GG + Q L +
Sbjct: 77 KNIYHYNSITKYG-PISIKGIATRLANVL--SATKYFPYIVQILIGGYDD-QPRLFNLDY 132
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
+G E+++VATG G+ +A +L DE++ ++ ++ L ++ + + RD + +
Sbjct: 133 LGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIV 192
Query: 207 AKITEEG 213
AKI +G
Sbjct: 193 AKIHSKG 199
>gi|383320533|ref|YP_005381374.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
gi|379321903|gb|AFD00856.1| proteasome endopeptidase complex, archaeal, beta subunit
[Methanocella conradii HZ254]
Length = 207
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 95/190 (50%), Gaps = 10/190 (5%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + +G++ A + + G+ I + ++I + + + +G + D Q L R L
Sbjct: 8 GTTTVGIICNNGVVFATERRATMGTFIASRDAQKIYKLTDNIAMTIAGSVGDGQRLARIL 67
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYN--RRNKFDPLWNSLVLGGV-KNGQKYLG 142
E L++ GP +++ L+ ++ N K+ P + +++GGV K+G +
Sbjct: 68 QVEAKLFELRRH-----GPMSINA-LSMLLSNILAETKYMPFYVQVLIGGVDKSGPRIYS 121
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ + G E +TG G+ +A +L D + ++S E GV+L K + + RD ++ N
Sbjct: 122 LDPLGGRIEEVKFSSTGSGSPIAYGVLEDRYKPDISVEQGVELAAKALESAMKRDSASGN 181
Query: 203 KLQIAKITEE 212
+Q A IT E
Sbjct: 182 GMQFAVITHE 191
>gi|257075968|ref|ZP_05570329.1| proteasome beta subunit [Ferroplasma acidarmanus fer1]
Length = 210
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 93/193 (48%), Gaps = 16/193 (8%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ + + D ++M D + G+ I K+ +++ I ++ + +G + D Q L+R
Sbjct: 6 TGTTTLGITAGDYVIMGTDSRATMGNFISNKNAQKLYKIDTYAGMTIAGLVGDAQVLVRY 65
Query: 86 L-DELILYD-----NMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
+ E+ LY NM P E + L M N+ +K+ P L++GG + +
Sbjct: 66 MRAEMELYRVQRKINM--------PIEAAATLLSNMLNQ-SKYYPYMVQLLVGGF-DKKP 115
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
++ + G + ED + +TG G+ +L E+ N+ +D + L K + V RD +
Sbjct: 116 HIFSIDAAGGSVEDEYASTGSGSPFVYGVLEAEYQPNMKLDDAINLAIKAISVAKQRDSA 175
Query: 200 AVNKLQIAKITEE 212
+ N LQI I E
Sbjct: 176 SGNMLQIGVIDPE 188
>gi|20094664|ref|NP_614511.1| protease subunit of the proteasome [Methanopyrus kandleri AV19]
gi|74559570|sp|Q8TW10.1|PSB_METKA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|19887825|gb|AAM02441.1| Protease subunit of the proteasome [Methanopyrus kandleri AV19]
Length = 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 90/187 (48%), Gaps = 3/187 (1%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + G+++AAD G+ I K V++I I + + +G ++D Q+++ +
Sbjct: 10 GTTTVGILADKGVVLAADRRAVMGNLIAGKQVKKIFRIHDYIGVTTAGSVADAQKIVDLM 69
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY+ + + L + ++ V+++ F P L++GG + L +
Sbjct: 70 RAEARLYE--LRHNRMISARALANMISHVLHSSLKAFRPYLVQLIVGGFNDDDPALYNLD 127
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G E+ + ATG G+ A +L E+ E +S +D +++ + ++ L RD +
Sbjct: 128 PSGSIIEEDYTATGSGSPTAYGVLEAEYEEGMSLDDAIEVAVRAVKSALERDTGTGEGVT 187
Query: 206 IAKITEE 212
+ IT E
Sbjct: 188 VVTITRE 194
>gi|347522768|ref|YP_004780338.1| proteasome endopeptidase complex subunit beta [Pyrolobus fumarii
1A]
gi|343459650|gb|AEM38086.1| proteasome endopeptidase complex, beta subunit [Pyrolobus fumarii
1A]
Length = 209
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 90/195 (46%), Gaps = 5/195 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V LK ++ +++AAD + G I +K +I I + + SG ++D Q L
Sbjct: 17 TGTTTVGLKLREYVVLAADRRATAGYYIAHKKTRKIVKITDYMAMTTSGLVADAQVLAEI 76
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
L E + Y ++ P + + P L+LGG + +
Sbjct: 77 LREELRY---YELTTKRKPSVAAAANMLAAIIFSARMYPYIVQLLLGGYDTAPRLFN-ID 132
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
+G E+ + ATG G+ +A ++ + E++ ++ V+L K +R + RD + N +
Sbjct: 133 WLGTVTEEKYTATGSGSPIAIGVIESGYREDMKVDEAVELAVKAVRAAMERDVATGNGID 192
Query: 206 IAKITEEGTTISQPY 220
+ I +GT I++ Y
Sbjct: 193 VV-IIGKGTFITREY 206
>gi|268323699|emb|CBH37287.1| 20S proteasome, beta subunit [uncultured archaeon]
Length = 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 99/188 (52%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ + L + +++A++ + GS I K+ ++I + + +G + D Q L+R +
Sbjct: 10 GTTTIGLICGESVVLASEKRATMGSFIASKTAKKIYLVDDRIAMTTAGIVGDAQALVRIM 69
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
EL LY ++ ++ K + + L+ VM +R + P L++GG+ +L +
Sbjct: 70 TVELQLYKIRRNEPMTV--KGISTLLSNVMNGQR--YYPYIVQLLIGGIDRDGAHLYTID 125
Query: 146 MIGVNFEDSHV-ATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G N E+S + ATG G+ +A +L +++ +++S E G L + + + RD ++ +
Sbjct: 126 PFGGNTEESEIAATGSGSPIAYGVLENKYTKDISLEKGTALAIQALYSAIKRDSASGEAI 185
Query: 205 QIAKITEE 212
++ IT++
Sbjct: 186 EVVTITKD 193
>gi|429216737|ref|YP_007174727.1| proteasome endopeptidase complex subunit beta [Caldisphaera
lagunensis DSM 15908]
gi|429133266|gb|AFZ70278.1| proteasome endopeptidase complex, archaeal, beta subunit
[Caldisphaera lagunensis DSM 15908]
Length = 207
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 102/203 (50%), Gaps = 5/203 (2%)
Query: 22 LPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQE 81
+ Y GT++ +K KDG+++A D SYGS I ++ +++ + + +G +D
Sbjct: 3 ISYEQGTAL-GIKAKDGVVLATDKRMSYGSFIMSRNAKKVYLLNDRVGIALTGLYADVSG 61
Query: 82 LLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKY 140
L+R ++ I Y ++ ++ + + ++Y+ K P ++GG+ ++G+
Sbjct: 62 LVRIMNAEISYYETTNE-TTMSLYAISKLFSNILYSY--KMLPFLIESIIGGLDRDGKPK 118
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
+ + +G ED ++A G G A +L +++NL+ ++ K+ ++ + RD S+
Sbjct: 119 IYTLDALGSVTEDKYMAVGSGGTTALGVLEYSYNDNLTIDEAEKIAITALKTTMERDSSS 178
Query: 201 VNKLQIAKITEEGTTISQPYALK 223
+ + + I EG + + Y LK
Sbjct: 179 GDGIDLLIIKSEGKPLEKSYKLK 201
>gi|170043975|ref|XP_001849640.1| proteasome subunit beta type 7 [Culex quinquefasciatus]
gi|167867238|gb|EDS30621.1| proteasome subunit beta type 7 [Culex quinquefasciatus]
Length = 282
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 93/207 (44%), Gaps = 12/207 (5%)
Query: 7 KQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGK 66
KQG V P TGT++V + YKDG+++ AD + G + K+ E+I + K
Sbjct: 29 KQGFVAPK--------MIKTGTTIVGIIYKDGVILGADTRATEGPIVADKNCEKIHYLAK 80
Query: 67 HSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLW 126
+ +G +D E+ N+ L + + G ++ ++ L + ++ +
Sbjct: 81 NMYCCGAGTAAD-TEMTTNMIASNLELHRLNTGRTVPVVVANTMLKQFLFRYQGHISA-- 137
Query: 127 NSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
+LVLGGV N Y+ + G + + G G+ A + W ++ E+G KL+
Sbjct: 138 -ALVLGGVDNTGSYIYCIYPHGSTDKLPYATMGSGSLAAMSVFESRWKPDMDEEEGKKLV 196
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEG 213
+ ++ D + + + + I ++G
Sbjct: 197 RDAIAAGVFNDLGSGSNIDLCVIRKDG 223
>gi|448729804|ref|ZP_21712116.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
gi|445794125|gb|EMA44678.1| proteasome beta subunit [Halococcus saccharolyticus DSM 5350]
Length = 237
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 7/184 (3%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL-DELILYDN 94
+G+++A D S+G+ + K ++I I L SG +S Q L+ NL E+ LY+
Sbjct: 52 SEGVVLATDRRASFGNMVSSKQAKKIAEIHPRGALTISGAVSPAQALISNLRAEVDLYEA 111
Query: 95 MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDS 154
+ S+ + S LT + R F +LGGV + ++ + G E+
Sbjct: 112 RRSEEMSM---QALSTLTS-NFLRSGAF--FIVHPILGGVDDEGSHIYSIDPSGSVMEED 165
Query: 155 HVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGT 214
+ ATG G+ A +L ++ E LS ++ + ++ + RD ++ N + ++ IT+EG
Sbjct: 166 YNATGSGSPFAYGVLEQQYEEGLSNDEAETVAAHAVKSAVERDTASGNGIIVSTITDEGV 225
Query: 215 TISQ 218
T +
Sbjct: 226 TTEE 229
>gi|167044620|gb|ABZ09292.1| putative Proteasome A-type and B-type [uncultured marine
crenarchaeote HF4000_APKG7F19]
Length = 199
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 90/190 (47%), Gaps = 4/190 (2%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y+ G + V + Y +G++ A++ +YG+ + K+ ++ I +G ++D Q L
Sbjct: 5 YMPGATAVGITYDEGVVFASERRIAYGNFVVSKTTKKTFVITPQVGAACAGLVADMQILS 64
Query: 84 RNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
+ L M + + P + ++ +MY RR F PL +++GG+ + + +
Sbjct: 65 LQISALAKIRKM-EIKREVPPNTIAKMMSNMMYERR--FFPLLTQVIVGGLVD-KPVIYT 120
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+ +G D + A G G +A IL ++ + L+ + L K +R + RD ++ +
Sbjct: 121 LDPLGSVLPDDYAAVGTGAEMALGILDQQYKKELNETEATDLAVKSIRAAILRDSASGDN 180
Query: 204 LQIAKITEEG 213
+ + I + G
Sbjct: 181 IDVLVINKYG 190
>gi|335437987|ref|ZP_08560744.1| Proteasome endopeptidase complex [Halorhabdus tiamatea SARL4B]
gi|334893591|gb|EGM31802.1| Proteasome endopeptidase complex [Halorhabdus tiamatea SARL4B]
Length = 228
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 86/195 (44%), Gaps = 12/195 (6%)
Query: 33 LKYKDGILMAAD----MGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDE 88
L +G+++A D +GG + S VE I P +L+G+ G F LR+ E
Sbjct: 39 LSTAEGVVIATDRRASLGGRFVSNKNVVKVEEIHPTAAMTLVGSVGGAQSFIRTLRS--E 96
Query: 89 LILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIG 148
LY G S+ L + + R F L +LGGV + ++ + G
Sbjct: 97 ASLYATRR--GESISISALATLAGN--FARGGPF--LAIHPILGGVDDEGTHVYTIDPAG 150
Query: 149 VNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAK 208
ED + TG G +A + E+ +S +D L K ++ RD + N L IA+
Sbjct: 151 GVMEDDYAVTGSGMQVAYGTIEGEYDAEMSVDDARDLATKAVQAASERDTGSGNGLVIAE 210
Query: 209 ITEEGTTISQPYALK 223
IT+EG I + AL+
Sbjct: 211 ITDEGVEIEEFDALE 225
>gi|118575464|ref|YP_875207.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
gi|302595701|sp|A0RU86.1|PSB1_CENSY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|118193985|gb|ABK76903.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
Length = 193
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 86/188 (45%), Gaps = 4/188 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G + V + Y G+++A++ +YG+ + K+ + I + +G ++D Q L +
Sbjct: 3 GATAVGITYAGGVILASEKRIAYGNFLVSKNTRKTFQITPYVGAACAGLVADMQILSLQI 62
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
L M D + P + ++ +MY RR F PL +++GGV G+ + +
Sbjct: 63 SALAKIRKM-DLKRDIPPNSVAKMMSNMMYERR--FFPLLTQVIVGGVV-GEPAIYTLDS 118
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
+G D + A G G +A +L ++ +S +D V L + +R RD + + L I
Sbjct: 119 LGSVLPDEYAAVGTGAEMALGVLDPQFKSGMSEKDAVDLAVRGIRSAALRDSFSGDGLDI 178
Query: 207 AKITEEGT 214
+ G
Sbjct: 179 LALDANGA 186
>gi|154150927|ref|YP_001404545.1| proteasome endopeptidase complex protein [Methanoregula boonei 6A8]
gi|302595832|sp|A7I841.1|PSB_METB6 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|153999479|gb|ABS55902.1| Proteasome endopeptidase complex [Methanoregula boonei 6A8]
Length = 213
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 94/192 (48%), Gaps = 10/192 (5%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+TGT+ V L + G+++A + + G I K +++ I + +G + D Q+L R
Sbjct: 9 MTGTTTVGLVFAGGVILATEKRATMGYMIASKRAKKVYQIADRIGMTIAGGVGDAQQLAR 68
Query: 85 NLD-ELILYDNMWDDGNSLGPKE--LHSYLTRVMYNRRNKFDPLWNSLVLGGVKN-GQKY 140
+ E LY ++G L +YL +N++ P + L++GG+ + G
Sbjct: 69 IITVECNLYQIRRSREITVGAASTLLSNYLN------QNRYFPYYVQLLVGGIDDHGPSV 122
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
+ +M G E+ V+TG G+ +A +L D + ++ ++ V+L + +R + RD +
Sbjct: 123 YSVDAMGGATKEEDIVSTGSGSPMAYGVLEDRYRPGMNEDEAVELAVRALRSAMKRDAGS 182
Query: 201 VNKLQIAKITEE 212
+ + IT++
Sbjct: 183 GEGIHVVVITKD 194
>gi|240103778|ref|YP_002960087.1| peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
gi|302595756|sp|C5A7L1.1|PSB1_THEGJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|239911332|gb|ACS34223.1| Peptidase T1A, 20S proteasome beta-subunit (psmB) [Thermococcus
gammatolerans EJ3]
Length = 201
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 92/194 (47%), Gaps = 6/194 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + +DG+++AAD + G+ + K V ++ I H + +G + D L+R L
Sbjct: 10 GTTTVGVVCRDGVVLAADRRATLGNMVTSKEVTKVFQIDDHLAIAGAGLVGDILSLVRLL 69
Query: 87 -DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E LY G + K L + ++ V++ R+ P + ++GG + + +
Sbjct: 70 RAEAKLYRAKV--GREMSVKALATLVSNVLHGSRHL--PYFAWFLIGGYDVKPRLYSIDA 125
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
GV E+ +A G G A +L + + + + ++G+ L + ++ + RD +
Sbjct: 126 AGGVT-EERFIAAGSGMEFALALLEENFSDGMGLDEGIDLAVRAVKAAIRRDVYTGEGVT 184
Query: 206 IAKITEEGTTISQP 219
+ IT+EG +P
Sbjct: 185 VVAITKEGYRELEP 198
>gi|442749373|gb|JAA66846.1| Putative 20s proteasome regulatory subunit beta type [Ixodes
ricinus]
Length = 278
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 88/195 (45%), Gaps = 4/195 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++ + +KDG+++ AD + GS I K+ +I + + +G +D E N
Sbjct: 39 TGTTIAGIIFKDGVILGADTRATSGSIIADKNCAKIHYMAPNIYCCGAGTAAD-TEKTTN 97
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + G ++ + L ++++ + +LVLGGV N L +
Sbjct: 98 MISSQLELHRLATGRTVPVCTANRMLKQMLFRYQGHISA---ALVLGGVDNTGGVLCCIH 154
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G +V G G+ A + +W +++ E+G K++ + ++ D + + +
Sbjct: 155 PHGSTDRLPYVTMGSGSLAAMAVFERDWKPDMTLEEGKKVVRDAIAAGIFNDLGSGSNID 214
Query: 206 IAKITEEGTTISQPY 220
I IT EG +PY
Sbjct: 215 ICVITREGKEYIRPY 229
>gi|448727796|ref|ZP_21710145.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
gi|445789782|gb|EMA40461.1| proteasome beta subunit [Halococcus morrhuae DSM 1307]
Length = 228
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 89/183 (48%), Gaps = 7/183 (3%)
Query: 37 DGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD-ELILYDNM 95
DG+++A D S G+ + K ++I I L SG +S Q L+ NL E+ LY+
Sbjct: 44 DGVVLATDRRASAGNLVASKRAKKIAEIHPRGALTISGAVSAAQALISNLQAEVDLYEAR 103
Query: 96 WDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSH 155
G + + L + + + R F +LGGV + ++ + G E+ +
Sbjct: 104 R--GEEMSMQALSTLTSNFL--RSGAF--YIVQPILGGVDDEGAHIYSIDPAGSVMEEEY 157
Query: 156 VATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTT 215
ATG G+ A +L ++ + LS ++ + + ++ + RD ++ N + I++ITE+G
Sbjct: 158 DATGSGSPFAYGVLEQQYEDGLSNDEARTVAARAVKSAVERDTASGNGIIISEITEDGVE 217
Query: 216 ISQ 218
I +
Sbjct: 218 IEE 220
>gi|227827648|ref|YP_002829428.1| proteasome endopeptidase complex protein [Sulfolobus islandicus
M.14.25]
gi|227830344|ref|YP_002832124.1| proteasome beta-type subunit [Sulfolobus islandicus L.S.2.15]
gi|229579161|ref|YP_002837559.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|229584852|ref|YP_002843354.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238619816|ref|YP_002914642.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284997769|ref|YP_003419536.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
gi|302595712|sp|D2PK63.1|PSB1_SULID RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595725|sp|C4KHB0.1|PSB1_SULIK RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595727|sp|C3MQ16.1|PSB1_SULIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595742|sp|C3MVD5.1|PSB1_SULIM RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595747|sp|C3N5N4.1|PSB1_SULIA RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|302595752|sp|C3NE98.1|PSB1_SULIY RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|227456792|gb|ACP35479.1| Proteasome, beta-type subunit, conserved site [Sulfolobus
islandicus L.S.2.15]
gi|227459444|gb|ACP38130.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.14.25]
gi|228009875|gb|ACP45637.1| Proteasome endopeptidase complex [Sulfolobus islandicus Y.G.57.14]
gi|228019902|gb|ACP55309.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.27]
gi|238380886|gb|ACR41974.1| Proteasome endopeptidase complex [Sulfolobus islandicus M.16.4]
gi|284445664|gb|ADB87166.1| Proteasome endopeptidase complex [Sulfolobus islandicus L.D.8.5]
Length = 211
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K DG+++AAD S G + K V ++ I + +G ++D Q + L
Sbjct: 17 GTTTVGIKVNDGVVLAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
+ Y+++ G + K + + L V+ K+ P +++GG + Q L +
Sbjct: 77 KNIYHYNSITKYG-PISIKGIATRLANVL--SATKYFPYIVQILIGGYDD-QPRLFNLDY 132
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
+G E+++VATG G+ +A +L DE++ ++ ++ L ++ + + RD + +
Sbjct: 133 LGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIV 192
Query: 207 AKITEEG 213
AKI +G
Sbjct: 193 AKIHSKG 199
>gi|298674378|ref|YP_003726128.1| proteasome endopeptidase complex subunit beta [Methanohalobium
evestigatum Z-7303]
gi|298287366|gb|ADI73332.1| proteasome endopeptidase complex, beta subunit [Methanohalobium
evestigatum Z-7303]
Length = 211
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 102/192 (53%), Gaps = 6/192 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
++ GT+ V + D +++A + + G+ I K+ ++I I + +G + D Q+++
Sbjct: 7 HLKGTTTVGIACSDAVVLATERRATMGNFIASKTAKKIYQIDDRIGMTTAGSVGDAQQIV 66
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYL 141
R + E L+ ++ ++ K + + L+ ++ +R + PL L++GGV K G
Sbjct: 67 RIISVESKLFKMRRNEPITI--KGITTLLSNLLSGQR--YFPLMVQLIVGGVDKTGPNMY 122
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ + G E + VATG G+ + +L D +H++++ ++G +L + + + RD ++
Sbjct: 123 SLDPLGGRIEETNIVATGSGSPITYGLLEDRYHKDMTSDEGAELAIRALHNAMKRDSASG 182
Query: 202 NKLQIAKITEEG 213
+ + + IT++G
Sbjct: 183 DGIDVVVITKDG 194
>gi|195130036|ref|XP_002009460.1| GI15360 [Drosophila mojavensis]
gi|193907910|gb|EDW06777.1| GI15360 [Drosophila mojavensis]
Length = 313
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 86/189 (45%), Gaps = 6/189 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL-LR 84
TGTS+V + Y+DG+++ AD + G + K+ +I + H +G +D +++ L
Sbjct: 43 TGTSIVGIIYQDGVILGADTRATEGPIVSDKNCSKIHRLQDHIYCCGAGTAADTEQMTLM 102
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
EL L+ + G + L R ++ + +LV+GGV ++ +
Sbjct: 103 TSAELDLHG--LNTGRQVPLICASMMLRRTLFRYQGHISA---ALVMGGVDKYGPHINCI 157
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + + A G G A +L W+ L EDG +L+ K + ++ D + + +
Sbjct: 158 HPCGSIDKIPYAAMGSGTLAAMAVLEQGWNPELGLEDGKQLVRKAISAGVFNDLGSGSNI 217
Query: 205 QIAKITEEG 213
+ IT +G
Sbjct: 218 DLCVITRDG 226
>gi|18314179|ref|NP_560846.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74561745|sp|Q8ZST5.1|PSB2_PYRAE RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|18161769|gb|AAL65028.1| proteasome, beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 203
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 93/190 (48%), Gaps = 7/190 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G + V +K KDG+++AA+ SYG + +++ I + ++G I+D Q L + L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFVIDDKLAIASAGIIADMQTLAKIL 67
Query: 87 DELILYDNMWDDGNSLGPK--ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L ++ P + L+ +M++RR F P + +++GG+ +L ++
Sbjct: 68 K---LNAKAYELEMKRKPSTHSMARLLSVIMFSRR--FMPFFAEVLVGGIDEEGPHLIVM 122
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G ED++ A G G LA +L + +++ E+ KL + ++ + RD + +
Sbjct: 123 DPLGSLIEDNYAALGTGAKLAVAVLDTGYRPDITVEEAKKLAVQALKAAIERDPVSGGGI 182
Query: 205 QIAKITEEGT 214
+A + + G
Sbjct: 183 DLAIVDKNGA 192
>gi|91772427|ref|YP_565119.1| proteasome endopeptidase complex [Methanococcoides burtonii DSM
6242]
gi|121689381|sp|Q12YV7.1|PSB_METBU RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|91711442|gb|ABE51369.1| Proteasome subunit beta precursor [Methanococcoides burtonii DSM
6242]
Length = 210
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 99/191 (51%), Gaps = 6/191 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
++ GT+ V + DG+++A + + G I K+ ++I I + +G + D Q+++
Sbjct: 6 HLKGTTTVGIVCTDGVVLATEQRATMGHFIASKTAKKIYQIDDLVGMTTAGSVGDAQQIV 65
Query: 84 RNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
R + E L+ + S+ K + + L+ ++ +R + PL L++GGV +
Sbjct: 66 RIISVESKLFKMRRQE--SITIKGITTLLSNMLSGQR--YYPLMVQLLIGGVDKNGPAIY 121
Query: 143 MVSMIGVNFEDSH-VATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ +G N E++ V+TG G+ +A +L D + E+++ +GV L + + + RD ++
Sbjct: 122 SLDALGGNIEETRAVSTGSGSPMAYGVLEDRYTEDMTVVEGVDLAIRALHNAMKRDSASG 181
Query: 202 NKLQIAKITEE 212
+ + IT++
Sbjct: 182 ENIDVVVITKD 192
>gi|15897668|ref|NP_342273.1| proteasome subunit [Sulfolobus solfataricus P2]
gi|284174993|ref|ZP_06388962.1| proteasome subunit [Sulfolobus solfataricus 98/2]
gi|384434282|ref|YP_005643640.1| proteasome endopeptidase complex subunit beta [Sulfolobus
solfataricus 98/2]
gi|6015710|emb|CAB57537.1| proteasome, beta subunit [Sulfolobus solfataricus P2]
gi|13813939|gb|AAK41063.1| Proteasome subunit [Sulfolobus solfataricus P2]
gi|261602436|gb|ACX92039.1| proteasome endopeptidase complex, beta subunit [Sulfolobus
solfataricus 98/2]
Length = 225
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 94/187 (50%), Gaps = 4/187 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V ++ DG+++AAD S G + K V ++ I + +G ++D Q + L
Sbjct: 31 GTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 90
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
+ Y+++ G + K + + L V+ K+ P +++GG + Q L +
Sbjct: 91 KNIYHYNSITKYG-PISIKGIATRLANVL--SATKYFPYIVQILIGGYDD-QPRLFNLDY 146
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
+G E+++VATG G+ +A +L DE++ ++ ++ L ++ + + RD + +
Sbjct: 147 LGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVIV 206
Query: 207 AKITEEG 213
AKI +G
Sbjct: 207 AKIHSKG 213
>gi|448412962|ref|ZP_21576853.1| proteasome subunit beta [Halosimplex carlsbadense 2-9-1]
gi|445667664|gb|ELZ20305.1| proteasome subunit beta [Halosimplex carlsbadense 2-9-1]
Length = 246
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 91/197 (46%), Gaps = 16/197 (8%)
Query: 26 TGTSVVALKYKDGILMAAD----MGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQE 81
TGT+ V + DG+++A D +GG + S + VE+I P G +L+G+ G F
Sbjct: 48 TGTTTVGISTDDGVIVATDRRASLGGRFVSNKSVQKVEQIHPTGVLTLVGSVGGAQSFIR 107
Query: 82 LLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL--VLGGVKNGQK 139
LR+ E LY+ G S+G +H+ T + + P W ++ +L GV
Sbjct: 108 TLRS--EADLYEVRK--GESIG---IHALAT--LAGNFARGGP-WFAINPILAGVDEEGS 157
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
++ + G D + TG G LA + E+ + +S D L + + RD
Sbjct: 158 HVYSIDPAGGVMADDYTVTGSGMQLAYGTIEGEYDDEMSMADARDLAVRAVDAASERDTG 217
Query: 200 AVNKLQIAKITEEGTTI 216
+ N + +A++T +G I
Sbjct: 218 SGNGVYVAEVTADGVDI 234
>gi|302595920|sp|A0RXV1.2|PSB2_CENSY RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 210
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 92/189 (48%), Gaps = 7/189 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V +K DG+++ ADM S G I + +I+ I H+ L +G ++D Q N+
Sbjct: 12 GTTTVGIKATDGVVLCADMRASAGYFIANNNTMKIQRIDDHAGLTLAGGVADAQ----NI 67
Query: 87 DELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+++ Y GP + S LT ++++ +N+ P +++GG L +
Sbjct: 68 VDVLRYHASLHRIRKQGPIPIKSLARLTSLIFH-QNRGYPFMADILMGGFDAVGPALYNI 126
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
M G E S+V TG G+ +A L +E+ +L+ ++ + + ++ + R+ + +
Sbjct: 127 DMFGSVEEKSYVTTGSGSPVAYGTLEEEYRADLTADEAKGVALRAVKAAITRNIGTGDGI 186
Query: 205 QIAKITEEG 213
+A I G
Sbjct: 187 NVAVINGNG 195
>gi|9910839|sp|Q9UXF3.2|PSB2_SULSO RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 208
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V ++ DG+++AAD S G + K V ++ I + +G ++D Q + L
Sbjct: 14 GTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 73
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVM-YNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ Y+++ GP + TR+ K+ P +++GG + Q L +
Sbjct: 74 KNIYHYNSI----TKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYDD-QPRLFNLD 128
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
+G E+++VATG G+ +A +L DE++ ++ ++ L ++ + + RD +
Sbjct: 129 YLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVI 188
Query: 206 IAKITEEG 213
+AKI +G
Sbjct: 189 VAKIHSKG 196
>gi|397772627|ref|YP_006540173.1| proteasome endopeptidase complex subunit beta [Natrinema sp. J7-2]
gi|397681720|gb|AFO56097.1| proteasome endopeptidase complex subunit beta [Natrinema sp. J7-2]
Length = 239
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 38 GILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYD 93
G+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY+
Sbjct: 55 GVVIATDMRASLGGRFVSNKDVQKVEQIHPTGALTLVGSVGGAQSFIRTLRA--EVNLYE 112
Query: 94 NMWDDGNSLGPKELHSYLTRV-MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ + P + + T + R F + + +LGGV + ++ + G
Sbjct: 113 SRRGE-----PMPIEALATLAGNFARGGPFRAI--NPILGGVDDEGSHVYSIDPAGGVMA 165
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA +L E+ ++LS E + + ++ + RD + N + +A +T+E
Sbjct: 166 DDYTVTGSGMQLAYGLLEQEYEDDLSLEAAQSVAARAIKSAVERDTGSGNGVFLAAVTDE 225
Query: 213 GTTI 216
G I
Sbjct: 226 GVDI 229
>gi|284165546|ref|YP_003403825.1| proteasome endopeptidase complex subunit beta [Haloterrigena
turkmenica DSM 5511]
gi|302595714|sp|D2RUI0.1|PSB2_HALTV RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|284015201|gb|ADB61152.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
turkmenica DSM 5511]
Length = 237
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 14/185 (7%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
+G+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY
Sbjct: 52 EGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFIRTLRA--EVNLY 109
Query: 93 DNMWDDGNSLGPKELHSYLTRV-MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
++ + P + + T + R F + + +LGGV ++ + G
Sbjct: 110 ESRRGE-----PMPIEALATLAGNFARGGPFRAI--NPILGGVDEEGSHVYSIDPAGGVM 162
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
D + TG G LA +L E+ E LS E+ + + + + RD + N + +A +T
Sbjct: 163 ADDYTVTGSGMQLAYGLLEQEYEEGLSLEEAQSVAARAIESAVERDTGSGNGVFLAAVTG 222
Query: 212 EGTTI 216
EG I
Sbjct: 223 EGVDI 227
>gi|407408250|gb|EKF31765.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi marinkellei]
Length = 255
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 4/189 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + YKDG+++ AD + GS + K ++I + + + +G +D E + N
Sbjct: 28 TGTTIVGVVYKDGVVLGADTRATEGSIVADKRCKKIHYMAPNIMCCGAGTAAD-TEAVTN 86
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + D G E + L R +Y + + +LVLGGV +L V+
Sbjct: 87 MVSANLALHRLDTGKQSRVHEALTMLKRHLYRYQGY---VSAALVLGGVDVEGPFLATVA 143
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G V+ G G+ A L + EN++ E+ +L+ +R ++ D + ++
Sbjct: 144 PHGSTDRLPFVSMGSGSIAAMSALETGYKENMTLEEAKELVASAIRKGIFNDPYSGTQVD 203
Query: 206 IAKITEEGT 214
+ IT T
Sbjct: 204 LCVITRTKT 212
>gi|448362754|ref|ZP_21551358.1| proteasome endopeptidase complex subunit beta [Natrialba asiatica
DSM 12278]
gi|445647376|gb|ELZ00350.1| proteasome endopeptidase complex subunit beta [Natrialba asiatica
DSM 12278]
Length = 243
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 12/186 (6%)
Query: 36 KDGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELIL 91
+DG+++A DM GG + S + VE+I P G +++G+ G F LR E+ L
Sbjct: 57 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTMVGSVGGAQSFISSLRA--EVNL 114
Query: 92 YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
Y G ++ L + + R F + +LGGV + ++ + G
Sbjct: 115 YGARR--GEAMSIDALATLAGN--FARGGPFFAIHP--ILGGVDSEGSHVYSIDPAGGVM 168
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
ED + TG G LA +L E+ + LS +D + + ++ RD + N + + +IT+
Sbjct: 169 EDDYTVTGSGMQLAYGLLEQEYEDGLSNDDATTIAARAIKSAAERDTGSGNGVFLCEITD 228
Query: 212 EGTTIS 217
EG I+
Sbjct: 229 EGVEIN 234
>gi|302595900|sp|D0KTH0.2|PSB2_SULS9 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
Length = 211
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 92/188 (48%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V ++ DG+++AAD S G + K V ++ I + +G ++D Q + L
Sbjct: 17 GTTTVGIRVNDGVILAADRRASAGFFVANKMVRKVLYITDKIGITTAGSVADLQFIYDVL 76
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVM-YNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ Y+++ GP + TR+ K+ P +++GG + Q L +
Sbjct: 77 KNIYHYNSI----TKYGPISIKGIATRLANVLSATKYFPYIVQILIGGYDD-QPRLFNLD 131
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
+G E+++VATG G+ +A +L DE++ ++ ++ L ++ + + RD +
Sbjct: 132 YLGDITEENYVATGSGSPVAMGVLEDEYNPKMTLDEAADLAKRAVFSAIKRDSFTGTGVI 191
Query: 206 IAKITEEG 213
+AKI +G
Sbjct: 192 VAKIHSKG 199
>gi|407921804|gb|EKG14942.1| Proteasome subunit alpha/beta [Macrophomina phaseolina MS6]
Length = 205
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 84/184 (45%), Gaps = 11/184 (5%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNM 95
KD ++AA G++I + ++ +P+ KH+LL SGE D + + I +M
Sbjct: 12 KDFTIIAASKAAMRGASILKATDDKTRPLNKHTLLAFSGEAGDTVQFAEYIQANIQLYSM 71
Query: 96 WDDGNSLGPKELHSY----LTRVMYNRRNKFDPLWNSLVLGGVK--NGQKYLGMVSMIGV 149
+D + LGP + S+ L R + +RR P +L+LGG+ + L + +
Sbjct: 72 RNDTD-LGPSAVASFVRGELARALRSRR----PYTVNLLLGGMDPITDKPSLYWIDYLAA 126
Query: 150 NFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKI 209
+ A G+ + IL H ++S E G+K+L C L R L + I
Sbjct: 127 LAPVPYAAHGYAQYYCLSILDKHHHPDISLEQGMKILRMCSDELKRRLPIDFKGLVVKVI 186
Query: 210 TEEG 213
T+EG
Sbjct: 187 TKEG 190
>gi|170585560|ref|XP_001897550.1| Proteasome A-type and B-type family protein [Brugia malayi]
gi|158594857|gb|EDP33434.1| Proteasome A-type and B-type family protein [Brugia malayi]
Length = 273
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 4/194 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++VA YKDG++M AD + G+ I K E++ + +G +D ++ +
Sbjct: 41 TGTTIVATTYKDGLVMGADSRATAGNIIADKHCEKVHKLTDSIYACGAGTAADLNQVTKM 100
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
L + + N+ + + L R + + + L++GGV +L S
Sbjct: 101 LSAQLRLLEL----NTGKKARVVTALRRAKQHLFSYMGHVGAYLLIGGVDPTGPHLYQCS 156
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G + G G++ A IL ++ N++ E+ V L+ + ++ D ++ N L
Sbjct: 157 ANGYTQSKPFASEGSGSYAATTILERDFKTNMTQEEAVLLVRHALEAGMHGDNASGNSLN 216
Query: 206 IAKITEEGTTISQP 219
IT E T P
Sbjct: 217 FVIITPESTVFKGP 230
>gi|194889076|ref|XP_001977017.1| GG18789 [Drosophila erecta]
gi|190648666|gb|EDV45944.1| GG18789 [Drosophila erecta]
Length = 307
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 86/191 (45%), Gaps = 6/191 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL-LR 84
TGTS+V + +DG+++ AD + G + K+ +I + H +G +D + + L
Sbjct: 47 TGTSIVGIICQDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMMTLV 106
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
EL L+ + G + L R ++ + + +LV+GGV + + +
Sbjct: 107 TSSELDLH--QLNTGRQVPVVCASMLLRRTLFRYQGH---IGAALVMGGVDSTGPQIYCI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G N + + A G G A +L WH L E G +L+ + + ++ D + + +
Sbjct: 162 YPCGSNDKIPYAAMGSGTLAAMSVLEHGWHPRLDQEQGKQLVREAISAGVFNDLGSGSNI 221
Query: 205 QIAKITEEGTT 215
+ IT +G T
Sbjct: 222 DLCVITRKGAT 232
>gi|297527496|ref|YP_003669520.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256412|gb|ADI32621.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 215
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 25/201 (12%)
Query: 29 SVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDE 88
+V+ +K +GI++A + +Y + K+ ++ PI KH +G +G + D Q ++R L
Sbjct: 21 TVLGIKANNGIVIAGEKRLTYDGYVLSKNTRKVHPITKHVGIGFAGLVGDAQFIIRAL-- 78
Query: 89 LILYDNMWDDGNSLGPKELHSYLTRVMYNR-----------RNKFDPLWNSLVLGGVKNG 137
L + L R + R K PL +V+GG +
Sbjct: 79 ------------RLEAENYKLQLEREIRVRGLAKILSLLLYSYKLAPLMTEIVVGGYDDK 126
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+ ++ +G ED +VA G G +A I+ E+ E++ ++ KL +R + RD
Sbjct: 127 GPQIYVLDPVGSLIEDKYVALGSGGPIALGIIEKEYREDIDIDEAEKLAVSAIREAIERD 186
Query: 198 RSAVNKLQIAKITEEGTTISQ 218
+ + + + +ITEEG ++ +
Sbjct: 187 AVSGDGVDVLRITEEGYSLRE 207
>gi|169622693|ref|XP_001804755.1| hypothetical protein SNOG_14573 [Phaeosphaeria nodorum SN15]
gi|160704831|gb|EAT78113.2| hypothetical protein SNOG_14573 [Phaeosphaeria nodorum SN15]
Length = 276
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + G+++AAD + G + K+ E++ I H +G +D +
Sbjct: 28 TGTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHYISPHIWCAGAGTAADTE----- 82
Query: 86 LDELILYDNMWDDGNSLGPK-ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
I+ N+ S G K + + +T + + + LV+ GV +L V
Sbjct: 83 FTTAIISSNLELHALSTGRKPRVVTCMTMLKQHLFRHQGHIGAYLVVAGVDPTGAHLFTV 142
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + +V G G+ A + +W NLS +D +KL + ++ D + + +
Sbjct: 143 HAHGSTDKLPYVTMGSGSLAAMSVFETQWQSNLSRDDAIKLCANAIEAGIWNDLGSGSNV 202
Query: 205 QIAKITEEGTTISQPY 220
+A IT E TT+ + Y
Sbjct: 203 DVAVITNEKTTLLRNY 218
>gi|119872266|ref|YP_930273.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595707|sp|A1RSJ8.1|PSB1_PYRIL RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|119673674|gb|ABL87930.1| Proteasome endopeptidase complex [Pyrobaculum islandicum DSM 4184]
Length = 203
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 86/171 (50%), Gaps = 3/171 (1%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G + V +K KDG+++AA+ SYG + +++ I + ++G I+D Q L R L
Sbjct: 8 GATAVGIKAKDGVVLAAEKRVSYGFYTLSSAGKKVFIINDKLAIASAGIIADMQTLARIL 67
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
+L + + + + L+ +M++RR P + +++GGV +L ++
Sbjct: 68 -KLNVMSYELEVRKKPTVRAMAKLLSIIMFSRR--LLPFYAEVLVGGVDEEGPHLIVMDP 124
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+G ED++ A G G LA +L + ++S ++ KL + ++ + RD
Sbjct: 125 LGSLIEDNYAALGTGAKLAVSLLDATYRPDISLQEAKKLAVQAIKAAIERD 175
>gi|448340251|ref|ZP_21529224.1| proteasome endopeptidase complex subunit beta [Natrinema gari JCM
14663]
gi|445630557|gb|ELY83818.1| proteasome endopeptidase complex subunit beta [Natrinema gari JCM
14663]
Length = 239
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 87/184 (47%), Gaps = 14/184 (7%)
Query: 38 GILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYD 93
G+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY+
Sbjct: 55 GVVIATDMRASLGGRFVSNKDVQKVEQIHPTGALTLVGSVGGAQSFIRTLRA--EVNLYE 112
Query: 94 NMWDDGNSLGPKELHSYLTRV-MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ + P + + T + R F + + +LGGV + ++ + G
Sbjct: 113 SRRGE-----PMPIEALATLAGNFARGGPFRAI--NPILGGVDDEGSHVYSIDPAGGVMA 165
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA +L E+ ++LS E + + ++ + RD + N + +A +T+E
Sbjct: 166 DDYTVTGSGMQLAYGLLEQEYEDDLSLEAAQSVAARAIKSAVERDTVSGNGVFLAAVTDE 225
Query: 213 GTTI 216
G I
Sbjct: 226 GVDI 229
>gi|307596440|ref|YP_003902757.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307551641|gb|ADN51706.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 216
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 98/201 (48%), Gaps = 8/201 (3%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTI--RYKSVERIKPIGKHSLLGASGEISDFQEL 82
+TGT+ V + DG+++A D + G I R K V +I I H SG ++D Q++
Sbjct: 13 MTGTTTVGIVVNDGVVLATDRRVTAGYYIAHRKKGV-KIWKIDNHVAATMSGGVADLQKV 71
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
L L + + + G + + L +Y + ++++ R F L + + G + +
Sbjct: 72 LDALTATAIQYKI-ETGKPISIRALANYASLIVFSSR-PFIYLVHMIFGGWDPDEGPVIY 129
Query: 143 MVSMIG-VNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
M+ G + E +ATG G+ A +L D + ++S ED ++L + +R +Y D +
Sbjct: 130 MLDFFGTLTRETEFMATGSGSPTAFGVLEDGYRRDMSIEDAIRLAVRAVRSAIYHDPGSG 189
Query: 202 NKLQIAKITEEG--TTISQPY 220
+ + IT+EG S+PY
Sbjct: 190 EGIDVVTITKEGYKEVNSEPY 210
>gi|325968211|ref|YP_004244403.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323707414|gb|ADY00901.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 219
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 8/201 (3%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTI--RYKSVERIKPIGKHSLLGASGEISDFQEL 82
+TGT+ V + DG+++A D + G I R K V +I I H SG ++D Q++
Sbjct: 16 MTGTTTVGIVINDGVVLATDRRVTAGYYIAHRKKGV-KIWKIDNHIAATMSGGVADLQKV 74
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
L +L + + D G + + L +Y + V+++ R F L + ++ G + +
Sbjct: 75 LDSLTATAIQYKV-DTGKPISIRALANYASLVVFSSR-PFVYLVHMILGGWDPDEGPVIY 132
Query: 143 MVSMIG-VNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
M+ G + E +ATG G+ A +L D + ++S E+ V+L + +R +Y D +
Sbjct: 133 MLDFFGTLTKETEFMATGSGSPTAFGVLEDGYKRDMSIEEAVRLAVRAVRSAIYHDPGSG 192
Query: 202 NKLQIAKITEEG--TTISQPY 220
+ + IT+EG S PY
Sbjct: 193 EGIDVVTITKEGYKEVDSTPY 213
>gi|48477758|ref|YP_023464.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
gi|74567841|sp|Q6L181.1|PSB_PICTO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|48430406|gb|AAT43271.1| proteasome beta subunit [Picrophilus torridus DSM 9790]
Length = 210
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 6/185 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V + D ++M D + + I K+ +++ I ++ + +G + D Q L+R
Sbjct: 6 TGTTTVGITAGDYVIMGTDSRATMENFISNKNAQKLYQIDNYAAMTIAGLVGDAQVLVRY 65
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+ E+ LY P + + L M N+ KF P L++GG + + ++ +
Sbjct: 66 MKAEMELYRVQRKVSM---PIDAAATLLSNMLNQ-TKFYPYMVQLLVGGY-DTKPHIFSI 120
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + ED + +TG G+ +L E+ +N+S +DG+ L+ K + RD ++ N L
Sbjct: 121 DAAGGSVEDIYASTGSGSPFVYGVLEAEYQKNMSLDDGINLVIKAISAAKQRDSASGNML 180
Query: 205 QIAKI 209
Q+ +
Sbjct: 181 QLGVV 185
>gi|225709682|gb|ACO10687.1| Proteasome subunit beta type-6 precursor [Caligus rogercresseyi]
Length = 228
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 102/213 (47%), Gaps = 19/213 (8%)
Query: 9 GLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHS 68
G+ ND + TGT+++A +YKDG+++AAD S GS + + +++ P+
Sbjct: 12 GITENNDFLGMGSGEMSTGTTLLACEYKDGVMLAADCRTSLGSLVVSRETDKLTPVSDRI 71
Query: 69 LLGASGEISDFQELLR----NLDELILYDNMWDDGNSLGPKELHSYLTR-VMYNRRNKFD 123
L SG + Q + + NLD +Y+ M + P E ++L + + Y R D
Sbjct: 72 LCCRSGSAAVTQAIAKAIRYNLD---MYNVMMGES---APVETVAHLFKSICYEYR---D 122
Query: 124 PLWNSLVLGG---VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYE 180
L +++GG VK GQ Y + M G+ + + G G+ + + ++++ E
Sbjct: 123 SLTAGILVGGWDKVKGGQVY--SIPMGGMCVRQGYASGGSGSVYLHAFMSANYSKDMNKE 180
Query: 181 DGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEG 213
+ K+L + + + D S+ + A IT++G
Sbjct: 181 ECKKMLIRGIASAVEFDGSSGGSCRWASITKDG 213
>gi|195340520|ref|XP_002036861.1| GM12440 [Drosophila sechellia]
gi|194130977|gb|EDW53020.1| GM12440 [Drosophila sechellia]
Length = 307
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 85/192 (44%), Gaps = 12/192 (6%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL-LR 84
TGTS+V + YKDG+++ AD + G + K+ +I + H +G +D + + L
Sbjct: 47 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLT 106
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF---DPLWNSLVLGGVKNGQKYL 141
EL L+ L + + M RR F + +LV+GGV L
Sbjct: 107 TSAELDLH--------RLNTERQVPVVCASMMLRRTLFRYQGHIGAALVMGGVDRTGPQL 158
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ G N + + A G G A +L W +L E G +L+ + + ++ D +
Sbjct: 159 YCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDQEQGKQLVREAISAGVFNDLGSG 218
Query: 202 NKLQIAKITEEG 213
+ + + IT++G
Sbjct: 219 SNIDLCVITKQG 230
>gi|424814263|ref|ZP_18239441.1| 20S proteasome, beta subunit [Candidatus Nanosalina sp. J07AB43]
gi|339757879|gb|EGQ43136.1| 20S proteasome, beta subunit [Candidatus Nanosalina sp. J07AB43]
Length = 216
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 97/203 (47%), Gaps = 9/203 (4%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKD-GILMAADMGGSYGST-IRYKSVERIKPIGKHSLLG 71
N+ +Q ++ + D G ++AAD + G + K ++I + L
Sbjct: 3 NEKVQNKEMDEFETGTTTLGLTTDKGAILAADKRAALGGRLVSNKHAQKIYELDDEIGLT 62
Query: 72 ASGEISDFQELLRNLDELILYDNMWD-DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
+G + D Q+++R + + NM + L K + L +++ NK P N V
Sbjct: 63 IAGSVGDAQKVVRMMRSQL---NMKKLETRELSVKGAGTLLANILH--ANKMMPFMNQFV 117
Query: 131 LGGVKNGQKYL-GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKC 189
LGG++ G+ L + G+ + + ATG G+ +A +L D + +S+E+G +L
Sbjct: 118 LGGIQEGEGILYSLDPAGGLMPHEDYTATGSGSQMAFGVLEDGFEHGISHEEGKELAMNA 177
Query: 190 MRVLLYRDRSAVNKLQIAKITEE 212
++ + RD ++ N + +A+ITEE
Sbjct: 178 VKSAMERDTASGNGIMVAEITEE 200
>gi|300708256|ref|XP_002996311.1| hypothetical protein NCER_100618 [Nosema ceranae BRL01]
gi|239605602|gb|EEQ82640.1| hypothetical protein NCER_100618 [Nosema ceranae BRL01]
Length = 230
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 92/196 (46%), Gaps = 10/196 (5%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
T LP +TGT+++A+KY +G+L+ AD S G+ + + +++ I + SG +D
Sbjct: 30 TNLPEMTGTTIMAVKYDEGVLVGADCRTSMGTYVSSRFTDKLTKISDNIYCCRSGSAADT 89
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRR--NKFDPLWNSLVLGGVKNG 137
Q + + + E++ + D KE+ S M + K L L++ G
Sbjct: 90 QAIAQYVKEVVQRSSFID-------KEIPSVKKAAMIAKEIIYKNPSLLAGLIIAGYDTS 142
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
K +S+ G E G G+ + + +N++ E+ ++ +++ + + RD
Sbjct: 143 PKIYN-ISLGGTITEADWQIGGSGSAYIYGLCDTLYKDNMTLEEAIEFVKQAITCAIRRD 201
Query: 198 RSAVNKLQIAKITEEG 213
++ +++A I+ EG
Sbjct: 202 NASGGSIRMASISREG 217
>gi|448671267|ref|ZP_21687206.1| proteasome subunit beta [Haloarcula amylolytica JCM 13557]
gi|445765870|gb|EMA17007.1| proteasome subunit beta [Haloarcula amylolytica JCM 13557]
Length = 230
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 15/210 (7%)
Query: 13 PNDPIQRTQLPYV-TGTSVVALKYKDGILMAAD----MGGSYGSTIRYKSVERIKPIGKH 67
PN+ R + V TGT+ V + ++G+++A D +GG + S + + VE+I P
Sbjct: 20 PNEDGGRDEENVVKTGTTTVGIATENGVVIATDRRASLGGRFVSNKQVQKVEQIHPTAAM 79
Query: 68 SLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN 127
+L+G+ G F LR E LY+ D+ P +H+ T + + P +
Sbjct: 80 TLVGSVGGAQSFIRSLRA--EADLYEVRRDE-----PLSIHALAT--LAGNFARGGPYFA 130
Query: 128 -SLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
+ ++GGV ++ V G ED + TG G +A + ++ +S + L
Sbjct: 131 INPIVGGVDEEGSHVYSVDPAGGVLEDDYTVTGSGTMVATGTIEGQYDPEMSLGEARDLA 190
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEGTTI 216
+ + RD + N + +A+IT EG I
Sbjct: 191 IRAVNAAAERDTGSGNGVVLAEITGEGVEI 220
>gi|448358238|ref|ZP_21546923.1| proteasome endopeptidase complex subunit beta [Natrialba
chahannaoensis JCM 10990]
gi|445646809|gb|ELY99793.1| proteasome endopeptidase complex subunit beta [Natrialba
chahannaoensis JCM 10990]
Length = 243
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P G +++G+ G F LR E+ LY
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTMVGSVGGAQSFIGSLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRV-MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
+ + P + + T + R F + +LGGV ++ + G
Sbjct: 116 EARRGE-----PISMDALATLAGNFARGGPFFAIHP--ILGGVDEEGSHVYSIDPAGGVM 168
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
ED + TG G LA +L E+ E+LS ++ + + ++ RD + N + + +IT+
Sbjct: 169 EDDYTVTGSGMQLAYGLLEQEFEEDLSNDEATTIAARAIKSAAERDTGSGNGVFLCEITD 228
Query: 212 EGTTI 216
EG I
Sbjct: 229 EGVDI 233
>gi|302348749|ref|YP_003816387.1| proteasome beta subunit [Acidilobus saccharovorans 345-15]
gi|302329161|gb|ADL19356.1| Proteasome beta subunit [Acidilobus saccharovorans 345-15]
Length = 207
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 96/197 (48%), Gaps = 4/197 (2%)
Query: 29 SVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDE 88
+ V +K KDG+++A D +YGS + ++ +++ I + + SG +D +LR L
Sbjct: 10 TAVGVKAKDGVVLATDKRMAYGSFVMSRNAKKVFLINNRAAIAMSGLYADVGAILRYLTA 69
Query: 89 LILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMVSMI 147
Y + ++ ++ + L+ ++Y+ K P ++GG+ ++GQ + + +
Sbjct: 70 ESKYYELTEE-RTMSLYAISKLLSGILYSY--KMLPFIIEALVGGIDRDGQPKIYTLDSL 126
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G ED ++A G G A L D++++ LS + ++ +R+ + RD S + + +
Sbjct: 127 GSVSEDKYMAVGSGATTALGFLEDQYNDALSLDQAEQVAVGALRISMERDASTGDGIDVI 186
Query: 208 KITEEGTTISQPYALKT 224
I+ G + L+
Sbjct: 187 SISTSGAVKEKSLRLRV 203
>gi|289582997|ref|YP_003481463.1| proteasome endopeptidase complex subunit beta [Natrialba magadii
ATCC 43099]
gi|448283541|ref|ZP_21474815.1| proteasome endopeptidase complex subunit beta [Natrialba magadii
ATCC 43099]
gi|302595777|sp|D3SSQ6.1|PSB_NATMM RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|289532550|gb|ADD06901.1| proteasome endopeptidase complex, beta subunit [Natrialba magadii
ATCC 43099]
gi|445573860|gb|ELY28374.1| proteasome endopeptidase complex subunit beta [Natrialba magadii
ATCC 43099]
Length = 243
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 87/186 (46%), Gaps = 14/186 (7%)
Query: 36 KDGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELIL 91
+DG+++A DM GG + S + VE+I P G +++G+ G F LR E+ L
Sbjct: 57 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTMVGSVGGAQSFIGSLRA--EVNL 114
Query: 92 YDNMWDDGNSLGPKELHSYLTRV-MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVN 150
Y+ + P + + T + R F + +LGGV ++ + G
Sbjct: 115 YEARRGE-----PISMDALATLAGNFARGGPFFAIHP--ILGGVDEEGSHVYSIDPAGGV 167
Query: 151 FEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKIT 210
ED + TG G LA +L E+ E+LS ++ + + ++ RD + N + + +IT
Sbjct: 168 MEDDYTVTGSGMQLAYGLLEQEFEEDLSNDEATTVAARAIKSAAERDTGSGNGVFLCEIT 227
Query: 211 EEGTTI 216
+EG I
Sbjct: 228 DEGVDI 233
>gi|448355944|ref|ZP_21544693.1| proteasome endopeptidase complex subunit beta [Natrialba
hulunbeirensis JCM 10989]
gi|445634652|gb|ELY87831.1| proteasome endopeptidase complex subunit beta [Natrialba
hulunbeirensis JCM 10989]
Length = 243
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 86/185 (46%), Gaps = 14/185 (7%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P G +++G+ G F LR E+ LY
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTMVGSVGGAQSFIGSLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRV-MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
+ + P + + T + R F + +LGGV ++ + G
Sbjct: 116 EARRGE-----PISMDALATLAGNFARGGPFFAIHP--ILGGVDEEGSHVYSIDPAGGVM 168
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
ED + TG G LA +L E+ E+LS ++ + + ++ RD + N + + +IT+
Sbjct: 169 EDDYTVTGSGMQLAYGLLEQEFEEDLSNDEATTIAARAIKSAAERDTGSGNGVFLCEITD 228
Query: 212 EGTTI 216
EG I
Sbjct: 229 EGVDI 233
>gi|288931294|ref|YP_003435354.1| proteasome endopeptidase complex subunit beta [Ferroglobus placidus
DSM 10642]
gi|302595823|sp|D3RX66.1|PSB_FERPA RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|288893542|gb|ADC65079.1| proteasome endopeptidase complex, beta subunit [Ferroglobus
placidus DSM 10642]
Length = 210
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 98/188 (52%), Gaps = 6/188 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L KDG+++A + + G+ I + ++I I + +G + D Q L R +
Sbjct: 9 GTTTVGLVCKDGVVLATEKRATMGNFIASRRAKKIYKITDRIAMTTAGSVGDAQFLARLI 68
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMV 144
E LY ++ ++ K + + ++ ++ + R + P L++GGV K G K +
Sbjct: 69 KVETNLYTIRKEEEPTV--KAVATLVSNLLNSVR--YFPYLVQLLIGGVDKTGAKIYSID 124
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+ G E VATG G+ +A +L D + ++++ ++ V+L + + + RD ++ + +
Sbjct: 125 PIGGAIEEIDIVATGSGSPMAYGVLEDNYRKDINVDEAVELAIRAIYSAMKRDSASGDGI 184
Query: 205 QIAKITEE 212
+ KITE+
Sbjct: 185 DVVKITEK 192
>gi|389852762|ref|YP_006354996.1| proteasome, subunit beta [Pyrococcus sp. ST04]
gi|388250068|gb|AFK22921.1| putative proteasome, subunit beta [Pyrococcus sp. ST04]
Length = 173
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 78/159 (49%), Gaps = 6/159 (3%)
Query: 56 KSVERIKPIGKHSLLGASGEISDFQELLRNL-DELILYDNMWDDGNSLGPKELHSYLTRV 114
++V +I + +H + +G++ D L+R L E LY + G + K L + L +
Sbjct: 5 RNVTKIHKVDEHLAIAGAGDVGDILSLVRLLRAEARLYKA--NVGKPMSVKALATLLANI 62
Query: 115 MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH 174
+ K+ P + ++GG + V M G ED +VA G G A +L E+
Sbjct: 63 L--NGTKYFPYFVWFLVGGYDEEPRMFS-VDMAGGVTEDKYVAAGSGMEFAYSVLDSEYK 119
Query: 175 ENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEG 213
E+LS ++G+KL K + V + RD + + + + IT EG
Sbjct: 120 EDLSVKEGIKLAVKAINVAIKRDVFSGDGILVVTITREG 158
>gi|195470076|ref|XP_002099959.1| GE16434 [Drosophila yakuba]
gi|194187483|gb|EDX01067.1| GE16434 [Drosophila yakuba]
Length = 315
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 87/189 (46%), Gaps = 6/189 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL-LR 84
TGTS+V + Y+DG+++ AD + G + K+ +I + H +G +D + + L
Sbjct: 47 TGTSIVGIIYQDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMMTLM 106
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
EL L+ + G + P S L R R + +LV+GGV + + +
Sbjct: 107 TSAELDLHQ--LNTGRQV-PVVCASMLLRRTLFRYQGH--IGAALVMGGVDSSGPQIYCI 161
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G N + + A G G A +L W +L E G +L+ + + ++ D + + +
Sbjct: 162 YPCGSNDKIPYAAMGSGTLAAMSVLEHGWQPHLDQEQGKQLVREAISAGVFNDLGSGSNI 221
Query: 205 QIAKITEEG 213
+ IT++G
Sbjct: 222 DLCVITKKG 230
>gi|71659830|ref|XP_821635.1| proteasome beta 2 subunit [Trypanosoma cruzi strain CL Brener]
gi|70887019|gb|EAN99784.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
Length = 302
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + YK+G+++ AD + GS + K ++I + + + +G +D E + N
Sbjct: 75 TGTTIVGVVYKEGVVLGADTRATEGSIVADKRCKKIHYMAPNIMCCGAGTAAD-TEAVTN 133
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + D G E + L R +Y + + +LVLGGV +L V+
Sbjct: 134 MVSANLALHRLDTGKQSRVHEALTMLKRHLYRYQGH---VSAALVLGGVDVEGPFLATVA 190
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G V+ G G+ A L + EN++ E+ +L+ +R ++ D + ++
Sbjct: 191 PHGSTDRLPFVSMGSGSIAAMSALETGYKENMTLEEAKELVASAIRKGIFNDPYSGTQVD 250
Query: 206 IAKITEEGTTI 216
+ IT+ T +
Sbjct: 251 LCVITKTKTEL 261
>gi|448738912|ref|ZP_21720932.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
gi|445800726|gb|EMA51074.1| proteasome beta subunit [Halococcus thailandensis JCM 13552]
Length = 228
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 7/183 (3%)
Query: 37 DGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL-DELILYDNM 95
DG+++A D S G+ + K ++I I L SG +S Q L+ NL E LY+
Sbjct: 44 DGVVLATDRRASAGNMVASKRAQKIAEIHPRGALTISGAVSAAQALISNLRAEADLYEAR 103
Query: 96 WDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSH 155
G + + L + + + R F +LGGV + ++ + G E+ +
Sbjct: 104 R--GEEMSMQALSTLTSNFL--RSGAF--YIVQPILGGVDDEGAHIYSIDPAGSVMEEEY 157
Query: 156 VATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTT 215
ATG G+ A +L ++ + LS ++ + + ++ + RD ++ N + +++ITE+G
Sbjct: 158 DATGSGSPFAYGVLEQQYEDGLSNDEARTVAARAVKSAVERDTASGNGIILSEITEDGVE 217
Query: 216 ISQ 218
I +
Sbjct: 218 IEE 220
>gi|157136298|ref|XP_001656819.1| proteasome subunit beta type 7,10 [Aedes aegypti]
gi|108881087|gb|EAT45312.1| AAEL003431-PA [Aedes aegypti]
Length = 280
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 92/207 (44%), Gaps = 12/207 (5%)
Query: 7 KQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGK 66
KQG V P TGT++V + YKDG+++ AD + G + K+ E+I + K
Sbjct: 27 KQGFVAPK--------MIKTGTTIVGIIYKDGVILGADTRATEGPIVADKNCEKIHYLAK 78
Query: 67 HSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLW 126
+ +G +D E+ + L + + G ++ ++ L + ++ +
Sbjct: 79 NMYCCGAGTAAD-TEMTTQMIASNLELHRLNTGRTVPVVAANTMLKQFLFRYQGYVSA-- 135
Query: 127 NSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
+LVLGGV N Y+ + G + + G G+ A + W ++ E+G KL+
Sbjct: 136 -ALVLGGVDNTGSYIYCIYPHGSTDKLPYATMGSGSLAAMSVFESRWKPDMEEEEGKKLV 194
Query: 187 EKCMRVLLYRDRSAVNKLQIAKITEEG 213
+ ++ D + + + + I ++G
Sbjct: 195 RDAIAAGVFNDLGSGSNIDLCVIKKDG 221
>gi|374326224|ref|YP_005084424.1| proteasome subunit beta [Pyrobaculum sp. 1860]
gi|356641493|gb|AET32172.1| proteasome, beta subunit [Pyrobaculum sp. 1860]
Length = 203
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 91/190 (47%), Gaps = 7/190 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G + V +K G+++AA+ SYG S +++ + + ++G I+D Q L + L
Sbjct: 8 GATAVGIKTAGGVVLAAEKRVSYGFYTLSSSGKKVFVVDDKLAIASAGIIADMQALAKIL 67
Query: 87 DELILYDNMWDDGNSLGPK--ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
L ++ P + L+ VM++RR F P + +++GGV +L ++
Sbjct: 68 K---LNAKSYELEMKKKPSVHAMAKLLSVVMFSRR--FMPFFAEVLVGGVDEEGPHLIVM 122
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G ED++ A G G LA +L + ++S E+ KL + ++ + RD + +
Sbjct: 123 DPLGSLIEDNYAALGTGAKLAAAVLDGNYRNDMSIEEAKKLAVQALKAAIERDPVSGGGI 182
Query: 205 QIAKITEEGT 214
+ + E+G
Sbjct: 183 DLVVVDEKGA 192
>gi|300120426|emb|CBK19980.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G +V A+ KD +++AAD + G I ++V R+ P+ +LG +G +D LLR L
Sbjct: 3 GGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRTL 62
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMVS 145
E + + ++ + + + L+ +YNRR F P++ VL G+ +NGQ +
Sbjct: 63 -EYDIKEYKYNHREEISTSAVAALLSNTLYNRR--FFPIYAFNVLCGLDENGQGVIYSYD 119
Query: 146 MIGVNFE-DSHVATGFGNHLARPIL--------RDEWHENLSYEDGVKLLEKCMRVLLYR 196
IG +FE + G PIL R+E + +L E+ + L+++ R
Sbjct: 120 AIG-SFELMKYAVQGSAQSHIIPILDSCVAKKNRNEPYVDLDREEALNLMKEVFTAGTER 178
Query: 197 DRSAVNKLQIAKITEEG 213
++ ++L+I +T G
Sbjct: 179 EKDTGDQLEILTVTAHG 195
>gi|432328820|ref|YP_007246964.1| proteasome endopeptidase complex, archaeal, beta subunit
[Aciduliprofundum sp. MAR08-339]
gi|432135529|gb|AGB04798.1| proteasome endopeptidase complex, archaeal, beta subunit
[Aciduliprofundum sp. MAR08-339]
Length = 225
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 90/178 (50%), Gaps = 5/178 (2%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNM 95
KDG+++ + S + I +K+ +++ + + + +G + D Q L+R + I N+
Sbjct: 31 KDGVVLGTEHRASMETFIAHKTAQKLYRLDYNIGMTTAGLVGDLQVLVRYMRAEI---NL 87
Query: 96 WDDGNSL-GPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDS 154
+ + P + L + N R KF P + L++GG + ++ + G ED
Sbjct: 88 YRIRRKMYMPVGAAATLLSNILNER-KFFPYYVGLLVGGFDDRGYHVYAIDAAGGAIEDK 146
Query: 155 HVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
+ + G G+ +L D WH+++ ++G++L+ + + + RD ++ + + +A IT+E
Sbjct: 147 YASVGSGSLFVYGVLEDRWHDDIGLDEGIELVIRGINAAMRRDAASGDGISVATITKE 204
>gi|24639979|ref|NP_572267.1| proteasome beta2R1 subunit [Drosophila melanogaster]
gi|7290639|gb|AAF46088.1| proteasome beta2R1 subunit [Drosophila melanogaster]
gi|194353118|emb|CAQ53351.1| CG18341-PA [Drosophila melanogaster]
gi|194353120|emb|CAQ53352.1| CG18341-PA [Drosophila melanogaster]
gi|194353122|emb|CAQ53353.1| CG18341-PA [Drosophila melanogaster]
gi|194353124|emb|CAQ53354.1| CG18341-PA [Drosophila melanogaster]
gi|194353126|emb|CAQ53355.1| CG18341-PA [Drosophila melanogaster]
gi|194353128|emb|CAQ53356.1| CG18341-PA [Drosophila melanogaster]
gi|194353130|emb|CAQ53357.1| CG18341-PA [Drosophila melanogaster]
gi|194353134|emb|CAQ53359.1| CG18341-PA [Drosophila melanogaster]
gi|194353136|emb|CAQ53360.1| CG18341-PA [Drosophila melanogaster]
gi|220949894|gb|ACL87490.1| CG18341-PA [synthetic construct]
gi|223968609|emb|CAR94035.1| CG18341-PA [Drosophila melanogaster]
gi|223968611|emb|CAR94036.1| CG18341-PA [Drosophila melanogaster]
gi|223968617|emb|CAR94039.1| CG18341-PA [Drosophila melanogaster]
gi|223968619|emb|CAR94040.1| CG18341-PA [Drosophila melanogaster]
gi|223968621|emb|CAR94041.1| CG18341-PA [Drosophila melanogaster]
gi|223968623|emb|CAR94042.1| CG18341-PA [Drosophila melanogaster]
gi|223968625|emb|CAR94043.1| CG18341-PA [Drosophila melanogaster]
gi|223968627|emb|CAR94044.1| CG18341-PA [Drosophila melanogaster]
Length = 307
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 12/192 (6%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL-LR 84
TGTS+V + YKDG+++ AD + G + K+ +I + H +G +D + + L
Sbjct: 47 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLT 106
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF---DPLWNSLVLGGVKNGQKYL 141
EL L+ L + + M RR F + +LV+GGV L
Sbjct: 107 TSAELDLH--------RLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGGVDTTGPQL 158
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ G N + + A G G A +L W +L E G +L+ + + ++ D +
Sbjct: 159 YCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSG 218
Query: 202 NKLQIAKITEEG 213
+ + + IT +G
Sbjct: 219 SNIDLCVITAKG 230
>gi|194353132|emb|CAQ53358.1| CG18341-PA [Drosophila melanogaster]
Length = 307
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 12/192 (6%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL-LR 84
TGTS+V + YKDG+++ AD + G + K+ +I + H +G +D + + L
Sbjct: 47 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLT 106
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF---DPLWNSLVLGGVKNGQKYL 141
EL L+ L + + M RR F + +LV+GGV L
Sbjct: 107 TSAELDLH--------RLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGGVDTTGPQL 158
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ G N + + A G G A +L W +L E G +L+ + + ++ D +
Sbjct: 159 YCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLGLEQGKQLVREAISAGVFNDLGSG 218
Query: 202 NKLQIAKITEEG 213
+ + + IT +G
Sbjct: 219 SNIDLCVITAKG 230
>gi|195565293|ref|XP_002106236.1| GD16756 [Drosophila simulans]
gi|194203610|gb|EDX17186.1| GD16756 [Drosophila simulans]
Length = 307
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 12/192 (6%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL-LR 84
TGTS+V + Y+DG+++ AD + G + K+ +I + H +G +D + + L
Sbjct: 47 TGTSIVGIIYRDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLT 106
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF---DPLWNSLVLGGVKNGQKYL 141
EL L+ L + + M RR F + +LV+GGV L
Sbjct: 107 TSAELDLH--------RLNTERQVPVVCASMMLRRTLFRYQGHIGAALVMGGVDRTGPQL 158
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ G N + + A G G A +L W +L E G +L+ + + ++ D +
Sbjct: 159 YCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDQEQGKQLVREAISAGVFNDLGSG 218
Query: 202 NKLQIAKITEEG 213
+ + + IT++G
Sbjct: 219 SNIDLCVITKQG 230
>gi|28317309|gb|AAO39651.1| AT12292p, partial [Drosophila melanogaster]
Length = 308
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 12/192 (6%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL-LR 84
TGTS+V + YKDG+++ AD + G + K+ +I + H +G +D + + L
Sbjct: 48 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLT 107
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF---DPLWNSLVLGGVKNGQKYL 141
EL L+ L + + M RR F + +LV+GGV L
Sbjct: 108 TSAELDLH--------RLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGGVDTTGPQL 159
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ G N + + A G G A +L W +L E G +L+ + + ++ D +
Sbjct: 160 YCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSG 219
Query: 202 NKLQIAKITEEG 213
+ + + IT +G
Sbjct: 220 SNIDLCVITAKG 231
>gi|433639120|ref|YP_007284880.1| 20S proteasome subunit (alpha or beta) [Halovivax ruber XH-70]
gi|433290924|gb|AGB16747.1| 20S proteasome subunit (alpha or beta) [Halovivax ruber XH-70]
Length = 235
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 16/204 (7%)
Query: 24 YVTGTSVVALKYKDGILMAAD----MGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
+ TGT++VAL DG+++ AD +GG + + +S +++PIG+ + + SG +SD
Sbjct: 20 FSTGTTIVALGGDDGVVLGADARVSLGGRF---VTNRSARKVEPIGERAAVAFSGGVSDA 76
Query: 80 QELLRNL-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ 138
Q ++ L E LY+ D G + L + R++ R +F + L+LGGV
Sbjct: 77 QSVVDQLRTERQLYE--LDHGRPMPTDALATVTGRLI--RTGQFRSI--GLLLGGVDESA 130
Query: 139 KYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDR 198
Y + G D++ A+G G LA L + + D L + RD
Sbjct: 131 VY--WIDGGGGVMRDAYAASGSGMQLAYGALEGAYEPDRPVSDLQPLAADALAAAAERDV 188
Query: 199 SAVNKLQIAKITEEGTTISQPYAL 222
++ + + I IT+EG + + AL
Sbjct: 189 ASGDGMTITTITDEGLSERRTNAL 212
>gi|315426612|dbj|BAJ48240.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNM 95
KD +++A D + G + ++ +++ P+ H + +G ++D Q L+ + I Y +
Sbjct: 22 KDAVVVATDTRVTSGFFVAHRRGKKVFPLAPHVAITIAGRVADAQTLIDLIKANINYYQI 81
Query: 96 WDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSH 155
G + + + +M++ R + P + L+L GV N +L + G E+
Sbjct: 82 MR-GQVMSLPAVARLTSSLMFSSR--YFPFYAQLILAGVDNEGPHLYNLDPFGSVTEEKL 138
Query: 156 VATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
+ATG G+ +A +L + E++ + V+L + + + RD + + + +A + ++
Sbjct: 139 IATGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKD 195
>gi|159474370|ref|XP_001695298.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
gi|158275781|gb|EDP01556.1| 20S proteasome beta subunit A1 [Chlamydomonas reinhardtii]
Length = 212
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 5/188 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+++A+ + G+++AAD S G+ I + ++I P+ + SG +D Q + +
Sbjct: 2 GTTIIAVTFNGGVILAADSRTSTGNYIANRVTDKITPLCDNVYTLRSGSAADTQAIAGYV 61
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMVS 145
I + ++G + K + + + YN + D L L++ G K+G + +S
Sbjct: 62 QHFIA-QHQAEEGEHINVKTAANLVKMMAYNNK---DNLQAGLIVAGYDKHGGGQVFSIS 117
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
+ G E S +G G+ + W E +S ++ + + K +R + D S+ ++
Sbjct: 118 LGGTITETSFAMSGSGSTYINGFVDKYWREGMSEQEAMDFVTKALRYAMTWDASSGGCMR 177
Query: 206 IAKITEEG 213
IT G
Sbjct: 178 TVTITASG 185
>gi|119872605|ref|YP_930612.1| proteasome endopeptidase complex protein [Pyrobaculum islandicum
DSM 4184]
gi|302595721|sp|A1RTI7.1|PSB2_PYRIL RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|119674013|gb|ABL88269.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum islandicum
DSM 4184]
Length = 200
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 2/186 (1%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
T+ V + K+G+++A D + G I +K E+I I H SG ++D Q LL L
Sbjct: 2 TTTVGIAVKEGVVLATDKRVTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSLLSFL- 60
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
L + + + + L +Y++ +++ R + L +S++ G + L MV +
Sbjct: 61 TLRAREYKIEYKRPIPIRALVNYVSLILFYSR-PYIYLVHSIIGGVDREEGAVLYMVDWL 119
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G + ++ATG G+ A+ L + E++S ED V L + ++ + D + + +
Sbjct: 120 GTVTRERYIATGSGSPYAKGALEVGYREDMSLEDAVDLAIRSVKAAIRNDPGSGEGIDVV 179
Query: 208 KITEEG 213
IT+EG
Sbjct: 180 VITKEG 185
>gi|315426554|dbj|BAJ48184.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485300|dbj|BAJ50954.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 220
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNM 95
KD +++A D + G + ++ +++ P+ H + +G ++D Q L+ + I Y +
Sbjct: 22 KDAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQI 81
Query: 96 WDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSH 155
G + + + +M++ R + P + L+L GV N +L + G E+
Sbjct: 82 MR-GQVMSLPAVARLTSSLMFSSR--YFPFYAQLILAGVDNEGPHLYNLDPFGSVTEEKL 138
Query: 156 VATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
+ATG G+ +A +L + E++ + V+L + + + RD + + + +A + ++
Sbjct: 139 IATGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKD 195
>gi|194353116|emb|CAQ53350.1| CG18341-PA [Drosophila melanogaster]
Length = 307
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 12/192 (6%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL-LR 84
TGTS+V + YKDG+++ AD + G + K+ +I + H +G +D + + L
Sbjct: 47 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLT 106
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF---DPLWNSLVLGGVKNGQKYL 141
EL L+ L + + M RR F + +LV+GGV L
Sbjct: 107 TSAELDLH--------RLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGGVDTTGPQL 158
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ G N + + A G G A +L W +L E G +L+ + + ++ D +
Sbjct: 159 YCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSG 218
Query: 202 NKLQIAKITEEG 213
+ + + IT +G
Sbjct: 219 SNIDLCVITAKG 230
>gi|196000078|ref|XP_002109907.1| hypothetical protein TRIADDRAFT_21588 [Trichoplax adhaerens]
gi|190588031|gb|EDV28073.1| hypothetical protein TRIADDRAFT_21588 [Trichoplax adhaerens]
Length = 229
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 94/196 (47%), Gaps = 6/196 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++ + +KDGI++ AD S G+ I K+ +I I + +G +D + + R
Sbjct: 15 TGTTIAGIVFKDGIILGADTRASEGTFIADKNCSKIHYISPNMYCCGAGTAADTEYVTRL 74
Query: 86 LDELILYDNMWDDGNSLGPKELHSY-LTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+ I ++ + P+ + + + + M R + + LVLGGV + +L V
Sbjct: 75 ISSKIELHSLTTERK---PRVVAALTMLKQMLFRYQGYVGAY--LVLGGVDSTGPHLYTV 129
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + + +V G G+ A + D +H N+ ++ +L+ + ++ D + + +
Sbjct: 130 HARGSSDKLPYVTMGSGSLAAMAVFEDRYHVNMELDEAKQLVRDAIAAGIFNDLGSGSNV 189
Query: 205 QIAKITEEGTTISQPY 220
+ IT++GT +P+
Sbjct: 190 DLCVITKDGTDYIRPF 205
>gi|223968605|emb|CAR94033.1| CG18341-PA [Drosophila melanogaster]
gi|223968607|emb|CAR94034.1| CG18341-PA [Drosophila melanogaster]
gi|223968613|emb|CAR94037.1| CG18341-PA [Drosophila melanogaster]
gi|223968615|emb|CAR94038.1| CG18341-PA [Drosophila melanogaster]
Length = 307
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 12/192 (6%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL-LR 84
TGTS+V + YKDG+++ AD + G + K+ +I + H +G +D + + L
Sbjct: 47 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQDHIYCCGAGTAADTEMITLT 106
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF---DPLWNSLVLGGVKNGQKYL 141
EL L+ L + + M RR F + +LV+GGV L
Sbjct: 107 TSAELDLH--------RLNTERRVPVVCASMMLRRTLFRYQGHIGAALVMGGVDTTGPQL 158
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ G N + + A G G A +L W +L E G +L+ + + ++ D +
Sbjct: 159 YCIYPCGSNDKIPYAAMGSGTLAAMSVLEHGWKPDLDLEQGKQLVREAISAGVFNDLGSG 218
Query: 202 NKLQIAKITEEG 213
+ + + IT +G
Sbjct: 219 SNIDLCVITAKG 230
>gi|300120472|emb|CBK20026.2| unnamed protein product [Blastocystis hominis]
Length = 322
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 96/197 (48%), Gaps = 14/197 (7%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G +V A+ KD +++AAD + G I ++V R+ P+ +LG +G +D LLR L
Sbjct: 3 GGTVAAIAGKDYVIIAADTRLTQGYEILSRNVSRLHPLTSVCVLGNAGCWTDMTTLLRTL 62
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMVS 145
E + + ++ + + + L+ +YNRR F P++ VL G+ +NGQ +
Sbjct: 63 -EYDIKEYKYNHREEISTSAVAALLSNTLYNRR--FFPIYAFNVLCGLDENGQGVIYSYD 119
Query: 146 MIGVNFE-DSHVATGFGNHLARPIL--------RDEWHENLSYEDGVKLLEKCMRVLLYR 196
IG +FE + G PIL R+E + +L E+ + L+++ R
Sbjct: 120 AIG-SFELMKYAVQGSAQSHIIPILDSCVAKKNRNEPYVDLDREEALNLMKEVFTAGTER 178
Query: 197 DRSAVNKLQIAKITEEG 213
++ ++L+I +T G
Sbjct: 179 EKDTGDQLEILTVTAHG 195
>gi|324521809|gb|ADY47931.1| Proteasome subunit beta type-7 [Ascaris suum]
Length = 273
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 92/198 (46%), Gaps = 12/198 (6%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++VA YKDG++M AD + G+ I K ++ + + +G +D ++ +
Sbjct: 41 TGTTIVAATYKDGLVMGADSRATAGNIIADKHCTKVHKLTESMFACGAGTAADLDQVTKM 100
Query: 86 LD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPL---WNSLVLGGVKNGQKYL 141
L +L L + L + +T V +++ F + L++GGV +L
Sbjct: 101 LSAQLRLLE--------LNTGKKARVVTAVRRAKQHLFQYMGYIGAYLLIGGVDPTGPHL 152
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
S G + + G G++ A IL ++ ++ E+ +L+++ ++ ++ D ++
Sbjct: 153 YECSANGTTMSKPYASMGSGSYAAISILERDFKFGMNEEEACELVQRALQAGMHGDNASG 212
Query: 202 NKLQIAKITEEGTTISQP 219
N L IT + TT P
Sbjct: 213 NTLNFVIITRDTTTFKGP 230
>gi|315425374|dbj|BAJ47040.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 223
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/177 (20%), Positives = 86/177 (48%), Gaps = 3/177 (1%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNM 95
KD +++A D + G + ++ +++ P+ H + +G ++D Q L+ + I Y +
Sbjct: 25 KDAVVVATDTRVTSGFFVAHRRGKKVLPLAPHVAITIAGRVADAQTLIDLIKANINYYQI 84
Query: 96 WDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSH 155
G + + + +M++ R + P + L+L GV N +L + G E+
Sbjct: 85 MR-GQVMSLPAVARLTSSLMFSSR--YFPFYAQLILAGVDNEGPHLYNLDPFGSVTEEKL 141
Query: 156 VATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
+ATG G+ +A +L + E++ + V+L + + + RD + + + +A + ++
Sbjct: 142 IATGSGSPVAYGVLEPNYREDMDFNSAVELAFQAVSAAIRRDAGSGDSVDVAYVLKD 198
>gi|407847492|gb|EKG03188.1| proteasome beta 2 subunit, putative [Trypanosoma cruzi]
Length = 292
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 90/191 (47%), Gaps = 4/191 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + YK+G+++ AD + GS + K ++I + + + +G +D E + N
Sbjct: 65 TGTTIVGVVYKEGVVLGADTRATEGSIVADKRCKKIHYMAPNIMCCGAGTAAD-TEAVTN 123
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + D G E + L R +Y + + +LVLGGV +L V+
Sbjct: 124 MVSANLALHRLDTGKQSRVHEALTMLKRHLYRYQGH---VSAALVLGGVDVEGPFLATVA 180
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G V+ G G+ A L + EN++ E+ +L+ +R ++ D + ++
Sbjct: 181 PHGSTDRLPFVSMGSGSIAAMSALETGYKENMTLEEAKELVASAIRKGIFNDPYSGTQVD 240
Query: 206 IAKITEEGTTI 216
+ IT+ T +
Sbjct: 241 LCVITKTKTEL 251
>gi|68467871|ref|XP_722094.1| hypothetical protein CaO19.11508 [Candida albicans SC5314]
gi|68468188|ref|XP_721933.1| hypothetical protein CaO19.4025 [Candida albicans SC5314]
gi|46443876|gb|EAL03155.1| hypothetical protein CaO19.4025 [Candida albicans SC5314]
gi|46444042|gb|EAL03320.1| hypothetical protein CaO19.11508 [Candida albicans SC5314]
gi|238882904|gb|EEQ46542.1| proteasome component C11 [Candida albicans WO-1]
Length = 196
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDEL 89
++ +K DG L+A + G +I + ++ + + H+L+ +GE D + +
Sbjct: 4 ILGIKVSDGTLIATSKAATRGISILKDTDDKTRHLNAHNLIAYTGEAGDTVQFAEYVQAN 63
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMVSMI 147
I +M ++ L PK S++ + + P + ++GG VK + L + +
Sbjct: 64 IQLYSMRENDIELSPKATASFVRNQLASSLRSRKPYQVNCLIGGYDVKKNEPSLNWIDYL 123
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
G E + A G+ +L + ++++ EDG+KL++ C++ L R
Sbjct: 124 GTQVELPYGAHGYAAFYTTSLLDKHYRKDMTVEDGLKLMDMCVKELQTR 172
>gi|448395976|ref|ZP_21569070.1| proteasome endopeptidase complex subunit beta [Haloterrigena salina
JCM 13891]
gi|445660557|gb|ELZ13353.1| proteasome endopeptidase complex subunit beta [Haloterrigena salina
JCM 13891]
Length = 227
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY
Sbjct: 42 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISSLRA--EVNLY 99
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
++ G + L + + R F + +LGGV ++ + G E
Sbjct: 100 ESRR--GEQMSIDALATLAGN--FARGGPFFAIHP--ILGGVDEEGSHVYSIDPAGGVME 153
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA L + E++S E+ V + ++ + RD + N + + +IT+E
Sbjct: 154 DDYTVTGSGMQLAYGHLEQAYEEDMSNEEAVSVAAHGIKSAVERDTGSGNGVFLCEITDE 213
Query: 213 GTTI 216
G I
Sbjct: 214 GVDI 217
>gi|50421075|ref|XP_459082.1| DEHA2D13904p [Debaryomyces hansenii CBS767]
gi|49654749|emb|CAG87250.1| DEHA2D13904p [Debaryomyces hansenii CBS767]
Length = 194
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 79/169 (46%), Gaps = 2/169 (1%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDEL 89
++ ++ +D ++A + G ++ + ++ + + H+L+ +GE D + +
Sbjct: 4 ILGIRVQDSTIIATSKAATRGISVLKDTDDKTRKLNTHNLVAFTGEAGDTVQFAEYIQAN 63
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMVSMI 147
I M ++ L PK S++ + P ++++GG V N Q L + +
Sbjct: 64 IQLHTMRENDVELSPKATASFVRNQLATSIRSRKPYQVNVLIGGYDVNNDQPSLNWIDYL 123
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
G E + A G+ +L + +++ +++G+KLL++C++ L R
Sbjct: 124 GTQVELPYAAHGYAAFYCTSLLDRHYRKDMKFDEGLKLLKECLKELETR 172
>gi|284164848|ref|YP_003403127.1| proteasome endopeptidase complex subunit beta [Haloterrigena
turkmenica DSM 5511]
gi|302595690|sp|D2RQX3.1|PSB1_HALTV RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|284014503|gb|ADB60454.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
turkmenica DSM 5511]
Length = 243
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISSLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
++ G + L + + R F + +LGGV ++ + G E
Sbjct: 116 ESRR--GEQMSIDALATLAGN--FARGGPFFAIHP--ILGGVDEEGSHVYSIDPAGGVME 169
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA L + E++S E+ V + ++ + RD + N + + +IT+E
Sbjct: 170 DDYTVTGSGMQLAYGHLEQAYEEDMSNEEAVSVAAHGIKSAVERDTGSGNGVFLCEITDE 229
Query: 213 GTTI 216
G I
Sbjct: 230 GVDI 233
>gi|124028410|ref|YP_001013730.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
gi|302595717|sp|A2BN24.1|PSB1_HYPBU RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|123979104|gb|ABM81385.1| proteasome beta subunit [Hyperthermus butylicus DSM 5456]
Length = 204
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 95/194 (48%), Gaps = 4/194 (2%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y TG + V ++ +++AA+ SYG I K+ ++ I + L +G +D Q +
Sbjct: 5 YGTGATAVGIRGAGYVVLAAEKRVSYGGFIISKTARKVYKITDYLGLALAGLFADLQAIS 64
Query: 84 RNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK-NGQKYLG 142
+ L I Y N+ G + + + L ++Y+ K+ P + ++GG++ +G L
Sbjct: 65 KILRAEIEYYNIV-TGRRISVRAVARLLATILYS--YKYYPFLSETLVGGLEADGTAKLY 121
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
++ +G ED + A G G +A IL + + +++S +D KL +R + RD + +
Sbjct: 122 VMDPLGSLIEDDYAAIGSGAPIAIGILENGYSKDMSVDDAKKLAIAAVRAAIERDAMSGD 181
Query: 203 KLQIAKITEEGTTI 216
+ + I E +I
Sbjct: 182 GIDLLVIRREEDSI 195
>gi|269972981|emb|CBE67035.1| CG18341-PA [Drosophila atripex]
Length = 322
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGTS+V + YKDG+++ AD + G + K+ +I + KH +G +D E++
Sbjct: 49 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCGAGTAAD-TEMMTL 107
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G ++ P S L R R + +LV+GGV + +
Sbjct: 108 MTSAELDMHQLNTGRTV-PVVCASMLLRRTLFRYQGH--IGAALVMGGVDRKGPQIYCIY 164
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G N + + A G G A +L W ++ G +L+ + + ++ D + + +
Sbjct: 165 PCGSNDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNID 224
Query: 206 IAKITEEG 213
+ +T +G
Sbjct: 225 LCVVTAKG 232
>gi|194763361|ref|XP_001963801.1| GF21212 [Drosophila ananassae]
gi|190618726|gb|EDV34250.1| GF21212 [Drosophila ananassae]
gi|269973738|emb|CBE66755.1| CG18341-PA [Drosophila ananassae]
gi|269973746|emb|CBE66759.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGTS+V + YKDG+++ AD + G + K+ +I + KH +G +D E++
Sbjct: 49 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCGAGTAAD-TEMMTL 107
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G ++ P S L R R + +LV+GGV + +
Sbjct: 108 MTSAELDMHQLNTGRTV-PVVCASMLLRRTLFRYQGH--IGAALVMGGVDRKGPQIYCIY 164
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G N + + A G G A +L W ++ G +L+ + + ++ D + + +
Sbjct: 165 PCGSNDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNID 224
Query: 206 IAKITEEG 213
+ +T +G
Sbjct: 225 LCVVTAKG 232
>gi|241956129|ref|XP_002420785.1| proteasome subunit, putative [Candida dubliniensis CD36]
gi|223644127|emb|CAX41870.1| proteasome subunit, putative [Candida dubliniensis CD36]
Length = 196
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 78/169 (46%), Gaps = 2/169 (1%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDEL 89
++ +K D L+A + G +I + ++ + + H+L+ +GE D + +
Sbjct: 4 ILGIKVSDATLVATSKAATRGISILKDTDDKTRHLNAHNLIAYTGEAGDTVQFAEYVQAN 63
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMVSMI 147
I +M ++ L PK S++ + + P + ++GG VK Q L + +
Sbjct: 64 IQLYSMRENDIELSPKATASFVRNQLASSLRSRKPYQVNCLIGGYDVKTNQPSLNWIDYL 123
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
G E + A G+ +L + ++++ EDG+KL++ C++ L R
Sbjct: 124 GTQVELPYGAHGYAAFYTTSLLDKHYRKDMTVEDGLKLMDMCVKELQTR 172
>gi|302348116|ref|YP_003815754.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
gi|302328528|gb|ADL18723.1| proteasome beta subunit precursor [Acidilobus saccharovorans
345-15]
Length = 212
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 88/183 (48%), Gaps = 4/183 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V L D +++AAD + G+ I ++V++I + ++ + SG ++D Q L +
Sbjct: 19 GTTTVGLIAGDYVVLAADKRATAGTLIASRTVKKIVKLTDYAAMTISGLVADAQALADAV 78
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
E Y + D G L + + L ++ + +K+ P L++GG +
Sbjct: 79 REEARYYEL-DRGKRLSVYGMATLLANILSS--SKYFPYLVQLIVGGYDTAPHLYAIDPY 135
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
GV E+ +TG G+ +A +L + E +S +D V L + +R + RD + + + +
Sbjct: 136 GGVT-EEKVTSTGSGSPVALGVLERGYKEGISLDDAVNLAAEAIRSAILRDSATGDGIDV 194
Query: 207 AKI 209
I
Sbjct: 195 TII 197
>gi|254168241|ref|ZP_04875087.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|254168404|ref|ZP_04875249.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|289595801|ref|YP_003482497.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
boonei T469]
gi|302595865|sp|B5IEE5.1|PSB_ACIB4 RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|197622685|gb|EDY35255.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|197622750|gb|EDY35319.1| peptidase, T1 family [Aciduliprofundum boonei T469]
gi|289533588|gb|ADD07935.1| proteasome endopeptidase complex, beta subunit [Aciduliprofundum
boonei T469]
Length = 210
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 89/178 (50%), Gaps = 5/178 (2%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNM 95
KDG++M + S + I +K+ +++ + + + +G + D Q L+R + I N+
Sbjct: 16 KDGVVMGTEHRASMETFIAHKTAQKLYKLDYNIGMTTAGLVGDLQVLVRYMRAEI---NL 72
Query: 96 WDDGNSL-GPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDS 154
+ + P + L + N R KF P + L++GG + ++ + G ED
Sbjct: 73 YRIRRKMYMPVGAAATLLSNILNER-KFFPYYVGLLVGGFDSKGYHVFAIDAAGGAIEDK 131
Query: 155 HVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
+ + G G+ +L D W ++LS ++G+ L+ + + + RD ++ + + +A IT++
Sbjct: 132 YASVGSGSLFVYGVLEDRWKDDLSLDEGINLVIRGINAAMRRDAASGDGISVATITKD 189
>gi|383625306|ref|ZP_09949712.1| proteasome endopeptidase complex subunit beta [Halobiforma
lacisalsi AJ5]
gi|448700286|ref|ZP_21699394.1| proteasome endopeptidase complex, beta subunit [Halobiforma
lacisalsi AJ5]
gi|445779826|gb|EMA30741.1| proteasome endopeptidase complex, beta subunit [Halobiforma
lacisalsi AJ5]
Length = 243
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 12/185 (6%)
Query: 36 KDGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELIL 91
+DG+++A DM GG + S + VE+I P G +L+G+ G F LR E+ L
Sbjct: 57 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRA--EVNL 114
Query: 92 YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
Y++ G + + L + + R F + +LGGV + ++ + G
Sbjct: 115 YESRR--GEDMSIEALANLAGN--FARGGPFFAIHP--ILGGVDDEGSHVFSIDPAGGVM 168
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
ED + TG G LA L + ++LS ++ + + ++ RD + N + + +IT+
Sbjct: 169 EDDYTVTGSGMQLAYGHLEQSYEDDLSNDEATTIAARSIKSAAERDTGSGNGVFLCEITD 228
Query: 212 EGTTI 216
EG I
Sbjct: 229 EGVDI 233
>gi|269973732|emb|CBE66752.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGTS+V + YKDG+++ AD + G + K+ +I + KH +G +D E++
Sbjct: 49 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCGAGTAAD-TEMMTL 107
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G ++ P S L R R + +LV+GGV + +
Sbjct: 108 MTSAELDMHQLNTGRTV-PVVCASMLLRRTLFRYQGH--IGAALVMGGVDRKGPQIYCIY 164
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G N + + A G G A +L W ++ G +L+ + + ++ D + + +
Sbjct: 165 PCGSNDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNID 224
Query: 206 IAKITEEG 213
+ +T +G
Sbjct: 225 LCVVTAKG 232
>gi|269973736|emb|CBE66754.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGTS+V + YKDG+++ AD + G + K+ +I + KH +G +D E++
Sbjct: 49 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCGAGTAAD-TEMMTL 107
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G ++ P S L R R + +LV+GGV + +
Sbjct: 108 MTSAELDMHQLNTGRTV-PVVCASMLLRRTLFRYQGH--IGAALVMGGVDRKGPQIYCIY 164
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G N + + A G G A +L W ++ G +L+ + + ++ D + + +
Sbjct: 165 PCGSNDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNID 224
Query: 206 IAKITEEG 213
+ +T +G
Sbjct: 225 LCVVTAKG 232
>gi|325967588|ref|YP_004243780.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
gi|323706791|gb|ADY00278.1| Proteasome endopeptidase complex [Vulcanisaeta moutnovskia 768-28]
Length = 205
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 96/193 (49%), Gaps = 8/193 (4%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+TGT+V +K DG+++AA+ +YG T+ +S +++ + + + + G ++D Q L +
Sbjct: 8 ITGTAV-GIKASDGVVLAAEKRVAYGFTMFSRSGKKVFKVNDNIGMASIGILADMQVLTK 66
Query: 85 NLDELILYDNMWDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
Y +++ P + L+ V+++ N+ P + +++GG+ + +L
Sbjct: 67 IAKA---YMSLYSLDTKTRPSIRSAAKLLSYVLFS--NRILPYFVEVLVGGIDDEGPHLF 121
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
++ +G ED + A G G LA IL + +S ++ L K + + RD + +
Sbjct: 122 IMDALGSLIEDDYAAVGTGTKLAIAILESNYKPGMSIKEARDLAIKAINQSISRDPVSGD 181
Query: 203 KLQIAKITEEGTT 215
+ I IT G+T
Sbjct: 182 GIDILTITGNGST 194
>gi|269973744|emb|CBE66758.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGTS+V + YKDG+++ AD + G + K+ +I + KH +G +D E++
Sbjct: 49 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCGAGTAAD-TEMMTL 107
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G ++ P S L R R + +LV+GGV + +
Sbjct: 108 MTSAELDMHQLNTGRTV-PVVCASMLLRRTLFRYQGH--IGAALVMGGVDRKGPQIYCIY 164
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G N + + A G G A +L W ++ G +L+ + + ++ D + + +
Sbjct: 165 PCGSNDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNID 224
Query: 206 IAKITEEG 213
+ +T +G
Sbjct: 225 LCVVTAKG 232
>gi|268559794|ref|XP_002646072.1| C. briggsae CBR-PBS-2 protein [Caenorhabditis briggsae]
Length = 277
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++VA+ YK G++M AD + G+ I K E++ + + +G +D ++ +
Sbjct: 45 TGTTIVAVAYKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACGAGTAADLDQVTKM 104
Query: 86 LDELILYDNMWDDGNSLGPKELHS-YLTRVMYNRRNKFDPLWN-------SLVLGGVKNG 137
L GN L EL++ RV+ R L+N L++GGV
Sbjct: 105 L-----------SGN-LRLLELNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVDPT 152
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+L M S G A G G++ A IL ++ +++ E+ KL+++ + ++ D
Sbjct: 153 GPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKTDMTKEEAEKLVQRALEAGMHGD 212
Query: 198 RSAVNKLQIAKITEEGTTISQP 219
++ N L + I T P
Sbjct: 213 NASGNSLNLVIIEPNETVFKGP 234
>gi|269973748|emb|CBE66760.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGTS+V + YKDG+++ AD + G + K+ +I + KH +G +D E++
Sbjct: 49 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCGAGTAAD-TEMMTL 107
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G ++ P S L R R + +LV+GGV + +
Sbjct: 108 MTSAELDMHQLNTGRTV-PVVCASMLLRRTLFRYQGH--IGAALVMGGVDRKGPQIYCIY 164
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G N + + A G G A +L W ++ G +L+ + + ++ D + + +
Sbjct: 165 PCGSNDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNID 224
Query: 206 IAKITEEG 213
+ +T +G
Sbjct: 225 LCVVTAKG 232
>gi|340381844|ref|XP_003389431.1| PREDICTED: proteasome subunit beta type-7-like [Amphimedon
queenslandica]
Length = 271
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 89/206 (43%), Gaps = 6/206 (2%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TGT++ + +KDG+++ AD + G+ I K+ +I I K+ +G +D +
Sbjct: 33 PKKTGTTIAGIVFKDGVILGADTRATEGTVIADKNCAKIHYISKNIYCCGAGTAADTEYT 92
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFD-PLWNSLVLGGVKNGQKYL 141
+ I + S G K + R++ ++ + LVLGGV +L
Sbjct: 93 TETISSDIELHRL-----STGRKPRVATACRLLKQYLYRYQGHIGAYLVLGGVDTTGPHL 147
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
V G + +V G G+ A + + N+ E+G KL+ + ++ D +
Sbjct: 148 FTVHAHGSTDKLPYVTMGSGSLAAMAVFESHYTPNMGVEEGKKLVRDAIAGGIFNDLGSG 207
Query: 202 NKLQIAKITEEGTTISQPYALKTFWG 227
+ + + IT +G +PY + G
Sbjct: 208 SNVDLCVITADGVDYIRPYDVANVKG 233
>gi|327311727|ref|YP_004338624.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
gi|326948206|gb|AEA13312.1| Proteasome endopeptidase complex [Thermoproteus uzoniensis 768-20]
Length = 204
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 90/194 (46%), Gaps = 7/194 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y G + V +K KDG+++AA+ +YG S +++ + L ++G I+D Q +
Sbjct: 5 YGIGATAVGIKAKDGVVLAAEKRITYGFYSLSSSGKKVYVVNDRMALASAGVIADMQTIA 64
Query: 84 RNLDELILYDNMWDDGNSLGPK--ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYL 141
+ L + M++ + P + L+ +M+NRR P +++GG ++
Sbjct: 65 KILR---VNAKMYELESRRKPSIAAMAKLLSVIMFNRR--IMPFIAEVLVGGYDEEGPHI 119
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
++ +G ED + A G G +A IL + +++ KL +R L RD +
Sbjct: 120 FVLDPVGSLIEDDYAALGTGAKMAISILDANYSKDVDVSGARKLAINAIRAALERDPVSG 179
Query: 202 NKLQIAKITEEGTT 215
+ + +T +G +
Sbjct: 180 GGIDLVTVTADGVS 193
>gi|390939089|ref|YP_006402827.1| Proteasome endopeptidase complex [Desulfurococcus fermentans DSM
16532]
gi|390192196|gb|AFL67252.1| Proteasome endopeptidase complex [Desulfurococcus fermentans DSM
16532]
Length = 207
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
V+ T+ V L D +++AAD + G + +K+V++I I ++ L SG ++D Q ++
Sbjct: 6 VSKTTTVGLVTGDYVVLAADKRATAGPMVYHKAVKKISKITDYAALTISGLVADAQYIVE 65
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
N I + + G + K L S ++ ++ + ++ P L+LGG + L +
Sbjct: 66 N-ARYIAREYEIEIGGPIPIKALASRISLIL-SVYLRYSPFIVQLLLGGRDSTGASLYYM 123
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+ G + ++ATG G+ +A IL + +LS E+ KL + + RD
Sbjct: 124 DLYGSVTREKYMATGSGSPVAFGILEKNYRSDLSLEEAKKLAFNAVSSAIMRD 176
>gi|374327726|ref|YP_005085926.1| proteasome beta subunit [Pyrobaculum sp. 1860]
gi|356642995|gb|AET33674.1| proteasome beta subunit [Pyrobaculum sp. 1860]
Length = 201
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 89/185 (48%), Gaps = 3/185 (1%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
T+ V + +DG+++A D + G I +K E+I I H SG ++D Q +L L
Sbjct: 2 TTTVGIVVRDGVILATDKRVTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFL- 60
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
L + + + L +Y++ +++ R + + ++GGV G L M+ +
Sbjct: 61 TLRAREYRMEHKKPIPISALVNYMSLILFYSRPYVYIVHS--IIGGVDEGGAALYMIDWL 118
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G + ++ATG G+ A+ L + E++S E+ + L K ++ + D + + +
Sbjct: 119 GTVTRERYIATGSGSPYAKGALEVGYREDMSLEEAIDLAIKSVKAAIRNDPGSGEGIDVV 178
Query: 208 KITEE 212
IT++
Sbjct: 179 VITKK 183
>gi|269973730|emb|CBE66751.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGTS+V + YKDG+++ AD + G + K+ +I + KH +G +D E++
Sbjct: 49 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCGAGTAAD-TEMMTL 107
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G ++ P S L R R + +LV+GGV + +
Sbjct: 108 MTSAELDMHQLNTGRTV-PVVCASMLLRRTLFRYQGH--IGAALVMGGVDRKGPQIYCIY 164
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G N + + A G G A +L W ++ G +L+ + + ++ D + + +
Sbjct: 165 PCGSNDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNID 224
Query: 206 IAKITEEG 213
+ +T +G
Sbjct: 225 LCVVTAKG 232
>gi|269973728|emb|CBE66750.1| CG18341-PA [Drosophila ananassae]
gi|269973734|emb|CBE66753.1| CG18341-PA [Drosophila ananassae]
gi|269973740|emb|CBE66756.1| CG18341-PA [Drosophila ananassae]
gi|269973742|emb|CBE66757.1| CG18341-PA [Drosophila ananassae]
Length = 322
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 4/188 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGTS+V + YKDG+++ AD + G + K+ +I + KH +G +D E++
Sbjct: 49 TGTSIVGIIYKDGVILGADTRATEGPIVSDKNCSKIHHLQKHIYCCGAGTAAD-TEMMTL 107
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G ++ P S L R R + +LV+GGV + +
Sbjct: 108 MTSAELDMHQLNTGRTV-PVVCASMLLRRTLFRYQGH--IGAALVMGGVDRKGPQIYCIY 164
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G N + + A G G A +L W ++ G +L+ + + ++ D + + +
Sbjct: 165 PCGSNDKLPYAAMGSGTLAAMSVLEHSWRPDIDLAQGKQLVREAISAGVFNDLGSGSNID 224
Query: 206 IAKITEEG 213
+ +T +G
Sbjct: 225 LCVVTAKG 232
>gi|218884599|ref|YP_002428981.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
gi|302595713|sp|B8D683.1|PSB2_DESK1 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|218766215|gb|ACL11614.1| Proteasome subunit [Desulfurococcus kamchatkensis 1221n]
Length = 206
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 86/173 (49%), Gaps = 2/173 (1%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
V+ T+ V L D +++AAD + G + +K+V++I I ++ L SG ++D Q ++
Sbjct: 5 VSKTTTVGLVTGDYVVLAADKRATAGPMVYHKAVKKISKITDYAALTISGLVADAQYIVE 64
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
N I + + G + K L S ++ ++ + ++ P L+LGG + L +
Sbjct: 65 N-ARYIAREYEIEMGGPIPIKALASRISLIL-SVYLRYSPFIVQLLLGGRDSTGASLYYM 122
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+ G + ++ATG G+ +A IL + +LS E+ KL + + RD
Sbjct: 123 DLYGSVTREKYMATGSGSPVAFGILEKNYRSDLSLEEAKKLAFNAVSSAIMRD 175
>gi|408404082|ref|YP_006862065.1| proteasome subunit beta [Candidatus Nitrososphaera gargensis Ga9.2]
gi|408364678|gb|AFU58408.1| proteasome, subunit beta [Candidatus Nitrososphaera gargensis
Ga9.2]
Length = 219
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 8/162 (4%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ AL KDG+++AAD S G I + V +I+ + +H + +G ++D Q L +
Sbjct: 19 GTTTCALTCKDGVVLAADTRASAGLFIADRHVMKIQKVDQHLAMTIAGGVADAQNL---V 75
Query: 87 DELILYDNMWDDGN-SLGP-KELHSYLTRVMYNRRNKFDPLWNSLVLGG-VKNGQKYLGM 143
D + N++ N L P K + +++N+R + P + +++ G KN +
Sbjct: 76 DTMRYNANLYRFQNKELMPVKSAARLCSNILFNQR--YFPYYVQIIMAGYTKNEGSQIHN 133
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKL 185
+ + G + ++TG G+ +A L E+ + +S D K+
Sbjct: 134 IDLFGSMTTEKFISTGSGSPVAYGYLESEYRDGMSVNDAYKV 175
>gi|282165069|ref|YP_003357454.1| proteasome subunit beta [Methanocella paludicola SANAE]
gi|302595754|sp|D1Z199.1|PSB_METPS RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|282157383|dbj|BAI62471.1| proteasome subunit beta [Methanocella paludicola SANAE]
Length = 205
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 92/185 (49%), Gaps = 6/185 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + +G+++A + + G+ I + ++I + + + +G + D Q L R L
Sbjct: 8 GTTTVGIICNNGLVLATERRATMGNLIASRDAQKIYQLTDNIAMTIAGSVGDGQRLARML 67
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMVS 145
++ + GP +++ L+ ++ N ++ + +++GGV K+G K +
Sbjct: 68 QA----ESKLFELRRHGPMSINA-LSMLLSNLLWEYRIFYIQVLVGGVDKSGPKLFSLDP 122
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G E +TG G+ LA +L D + +++S E GV+L K + + RD ++ N +Q
Sbjct: 123 AGGRITEVKFSSTGSGSPLAYGVLEDRYKQDMSVEQGVELAAKALESAMKRDSASGNGMQ 182
Query: 206 IAKIT 210
IT
Sbjct: 183 FCVIT 187
>gi|448490545|ref|ZP_21608003.1| proteasome subunit alpha [Halorubrum californiensis DSM 19288]
gi|445693663|gb|ELZ45805.1| proteasome subunit alpha [Halorubrum californiensis DSM 19288]
Length = 266
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 86/187 (45%), Gaps = 6/187 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G V ++ DG++ A M S + +S+E++ + H ++G ++D ++L+ +L
Sbjct: 35 GAPSVGVRTTDGVVFVA-MSRPSSSLMEAESIEKLHKLDDHLGTASAGHVADARQLI-DL 92
Query: 87 DELILYDNMWDDGNSLGPKELHSYLT-RVMYN-RRNKFDPLWNSLVLGGVKNGQKYLGMV 144
N G +G + L ++T + N +R P +L++GG+ NG+ L
Sbjct: 93 ARRQSQGNRLRYGEPVGVETLTKFVTDHIQENTQRGGTRPYGAALLIGGIDNGEPRLFAA 152
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E G G + L DEWH++LS DG++L + + D + L
Sbjct: 153 DPSGTPNEWKATVIGGGRQDIQGHLEDEWHDDLSLADGIELAVAALAA--HDDEFEPSDL 210
Query: 205 QIAKITE 211
+A +TE
Sbjct: 211 AVATVTE 217
>gi|156541240|ref|XP_001600736.1| PREDICTED: proteasome subunit beta type-2-like [Nasonia
vitripennis]
Length = 207
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 91/190 (47%), Gaps = 6/190 (3%)
Query: 29 SVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDE 88
++ +++KD +L+AADM + + +I + K ++ SGE D + + +
Sbjct: 3 CLIGIQFKDFVLVAADMTNATSIMVMKSDEHKIHQVSKKLVMAVSGESGDATQFSEYISK 62
Query: 89 -LILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ-KYLGMVSM 146
L LY +G L PK ++ R + + P + ++++ G + L +
Sbjct: 63 NLQLYK--MRNGYELSPKAAANFTRRNLADYLRSRTPYFVNMLMAGYDDHTGPELYFIDY 120
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWH-ENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
+ + + A G+G + IL D +H +NL+ E+G LL+KC+R + R + +
Sbjct: 121 LASCVKVPYAAHGYGGFFSLTIL-DRYHRDNLTEEEGYALLKKCVREIHKRLIVNLPNFK 179
Query: 206 IAKITEEGTT 215
+ KI+++G T
Sbjct: 180 VQKISKDGIT 189
>gi|448397943|ref|ZP_21569881.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
limicola JCM 13563]
gi|445672159|gb|ELZ24736.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
limicola JCM 13563]
Length = 243
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISSLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ +G S+ L + N +LGGV + ++ + G E
Sbjct: 116 EARRGEGMSI------DALATLAGNFARGGPFFAIHPILGGVDDEGSHVYSIDPAGGVME 169
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA L + +++S E+ + + ++ + RD + N + + +IT+E
Sbjct: 170 DDYTVTGSGMQLAYGHLEQAYEDDMSNEEAKTVAARGIKSAVERDTGSGNGVFLCEITDE 229
Query: 213 GTTI 216
G I
Sbjct: 230 GVDI 233
>gi|156937771|ref|YP_001435567.1| proteasome endopeptidase complex protein [Ignicoccus hospitalis
KIN4/I]
gi|302595716|sp|A8AB58.1|PSB2_IGNH4 RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|156566755|gb|ABU82160.1| Proteasome endopeptidase complex [Ignicoccus hospitalis KIN4/I]
Length = 212
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V ++ + +++AAD + G+ I +K VE+I I + + +G ++D Q +L ++
Sbjct: 13 GTTTVGIRSEKAVVLAADKRATAGNFIVHKRVEKIVKISDYMAMTTAGLVADAQ-VLADV 71
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
+ + + + K ++L+ V+++ R F P L++GG + +
Sbjct: 72 LRMEVKNYELFHKKRMSVKAAATFLSNVLHSAR--FYPYIVQLLVGGFDTAPRLYSL-DW 128
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
G E+ + TG G+ +A ++ E++ N+ E+ V L + + RD ++ + +
Sbjct: 129 FGTVAEEEFLVTGSGSPMAVGVIEAEYNPNMDLEELVNLAVRAVFAATRRDTASGEGIDV 188
Query: 207 AKITEEGTTI 216
A I G T+
Sbjct: 189 AVIDRNGITM 198
>gi|401429794|ref|XP_003879379.1| putative proteasome beta 2 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495629|emb|CBZ30934.1| putative proteasome beta 2 subunit [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 254
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + YKDG+++ AD + GS + K +I + + + +G +D E + N
Sbjct: 28 TGTTIVGVVYKDGVVLGADTRATEGSIVADKCCRKIHYMAPNIMCCGAGTSAD-TEAVTN 86
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + ++ G E + L R +Y + + +LVLGGV +L V+
Sbjct: 87 MVSSHLALHRFETGKQSRVLEALTLLKRHLYRYQGH---VSAALVLGGVDVEGPFLATVA 143
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G V G G+ A L + +N++ E+ +L+ +R ++ D + ++
Sbjct: 144 PHGSTDRLPFVTMGSGSIAAMAQLEAAYKDNMTCEEAKELVTSAIRKGIFNDPYSGTQVD 203
Query: 206 IAKITEEGTTI 216
+ IT+ T +
Sbjct: 204 VCVITKAKTEL 214
>gi|385805286|ref|YP_005841684.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
Kam940]
gi|383795149|gb|AFH42232.1| 20S proteasome, Alpha and Beta subunits [Fervidicoccus fontis
Kam940]
Length = 199
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 90/188 (47%), Gaps = 3/188 (1%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G +VV LK+ +G ++A + +Y + I +++ I + G +G + D Q ++R
Sbjct: 7 GATVVGLKFSNGAVIAGEERMTYRTFIMSSQAKKVYLINERLGAGTAGLMGDTQNIIRIF 66
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
E I Y + + + K L+ ++Y+ R PL+ +L G+ + + L ++
Sbjct: 67 REEIRYYE-TEIKSKMSTKSAAKLLSNILYSYRGF--PLYGEFILAGIDDKKPTLVVLDP 123
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
G ED ++A G G +A +L + + +N+ + + L + ++ + RD + +
Sbjct: 124 AGSVLEDEYMAIGTGGPVAIGVLEELYQQNIDEKTAIDLAIRAVKQGVRRDAMSGGSIDY 183
Query: 207 AKITEEGT 214
I++ G+
Sbjct: 184 VVISDRGS 191
>gi|341875287|gb|EGT31222.1| hypothetical protein CAEBREN_17132 [Caenorhabditis brenneri]
gi|341892625|gb|EGT48560.1| hypothetical protein CAEBREN_10825 [Caenorhabditis brenneri]
Length = 277
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++VA+ YK G++M AD + G+ I K E++ + + +G +D ++ +
Sbjct: 45 TGTTIVAVAYKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACGAGTAADLDQVTKM 104
Query: 86 LDELILYDNMWDDGNSLGPKELHS-YLTRVMYNRRNKFDPLWN-------SLVLGGVKNG 137
L GN L EL++ RV+ R L+N L++GGV
Sbjct: 105 L-----------SGN-LRLLELNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVDPT 152
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+L M S G A G G++ A IL ++ +++ E+ +L+++ + ++ D
Sbjct: 153 GPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKTDMTKEEAEQLVQRALEAGMHGD 212
Query: 198 RSAVNKLQIAKITEEGTTISQP 219
++ N L + I T P
Sbjct: 213 NASGNSLNLVVIEPNETVFKGP 234
>gi|312076996|ref|XP_003141109.1| proteasome A-type and B-type family protein [Loa loa]
gi|307763727|gb|EFO22961.1| proteasome A-type and B-type family protein [Loa loa]
Length = 273
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 90/209 (43%), Gaps = 9/209 (4%)
Query: 11 VGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLL 70
+G P R+ TGT++VA YKDG++M AD + G+ + K E++ +
Sbjct: 31 MGVKPPTMRS-----TGTTIVAATYKDGLVMGADSRATAGNIVADKHCEKVHKLTDSIYA 85
Query: 71 GASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLV 130
+G +D ++ + L + + N+ + + L R + + + L+
Sbjct: 86 CGAGTAADLHQVTKMLSAQLRLLEL----NTGKKARVVTALRRAKQHLFSYMGHVGAYLL 141
Query: 131 LGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCM 190
+GGV +L S G + G G++ A +L ++ ++ E+ V L+ + +
Sbjct: 142 IGGVDPTGPHLYQCSANGYTQSKPFASEGSGSYAATTVLERDFKTGMAEEEAVLLVRRAL 201
Query: 191 RVLLYRDRSAVNKLQIAKITEEGTTISQP 219
++ D ++ N L IT E T P
Sbjct: 202 EAGMHGDNASGNSLNFVIITPETTIFKGP 230
>gi|336254558|ref|YP_004597665.1| proteasome endopeptidase complex subunit beta [Halopiger
xanaduensis SH-6]
gi|335338547|gb|AEH37786.1| proteasome endopeptidase complex, beta subunit [Halopiger
xanaduensis SH-6]
Length = 243
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
++ G ++ L S + R F + +LGGV ++ + G E
Sbjct: 116 ESRR--GENMSIDALASLAGN--FARGGPFFAIHP--ILGGVDEDGSHVFSIDPAGGVME 169
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA +L E+ ++LS ++ + ++ RD + N + + +IT+E
Sbjct: 170 DDYTVTGSGMQLAYGLLEQEYEDDLSNDEATTIAASAIKSAAERDTGSGNGVFLCEITDE 229
Query: 213 GTTI 216
G I
Sbjct: 230 GVDI 233
>gi|302828808|ref|XP_002945971.1| hypothetical protein VOLCADRAFT_102928 [Volvox carteri f.
nagariensis]
gi|300268786|gb|EFJ52966.1| hypothetical protein VOLCADRAFT_102928 [Volvox carteri f.
nagariensis]
Length = 223
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 87/198 (43%), Gaps = 9/198 (4%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
T P GTS++A+ + G+++ AD S G+ + + ++I P+ + SG +D
Sbjct: 8 TSAPVSMGTSIIAVTFNGGVILGADSRTSTGNYVANRVTDKITPLCDNVYTLRSGSAADT 67
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN--- 136
Q + + I + ++G+ + K + + + YN + D + L++ G
Sbjct: 68 QAIAGYVQHFIA-QHQAEEGDHVTVKTAANLVKMMAYNNK---DIMQAGLIVAGFDKYGG 123
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
GQ Y +S+ G +G G+ W EN+S E+ + + + +R +
Sbjct: 124 GQVY--SISLGGTITATPFSMSGSGSTYINGFCDKYWRENMSEEEAMDFVTRALRYAMTW 181
Query: 197 DRSAVNKLQIAKITEEGT 214
D S+ ++ IT GT
Sbjct: 182 DASSGGCIRTVTITAAGT 199
>gi|389860540|ref|YP_006362779.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
gi|388525443|gb|AFK50641.1| Proteasome beta subunit [Thermogladius cellulolyticus 1633]
Length = 206
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%), Gaps = 6/172 (3%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
T+ V L D +++AAD + G + +K V++I I ++ + SG ++D Q L+ D
Sbjct: 7 TTTVGLVVGDYVVLAADKRATGGPMVYHKRVKKIHKITDYAAMTISGLVADAQVLV---D 63
Query: 88 ELILYDNMW--DDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
E ++ D G + + L +Y++ ++ + ++ P L+LGGV L +
Sbjct: 64 EARYIARLYELDYGRRITLRSLSNYMSLIL-SAYLRYVPFIVQLLLGGVDEEGPSLYYLD 122
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+ G ++ + +TG G+ +A +L E+ +++S E+ L K + L RD
Sbjct: 123 LYGSISKEKYASTGSGSPVAYGVLEKEYRKDMSLEEAKHLAFKAVEAALSRD 174
>gi|409723248|ref|ZP_11270548.1| proteasome beta subunit [Halococcus hamelinensis 100A6]
Length = 237
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 84/179 (46%), Gaps = 7/179 (3%)
Query: 39 ILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD-ELILYDNMWD 97
+++A D S G+ + K E+I I L SG +S Q L+ NL E+ LY+
Sbjct: 55 VVLATDRRASAGNLVASKRAEKIAEIHPRGALTISGAVSAAQALINNLQAEVRLYEARR- 113
Query: 98 DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVA 157
G + K L + + + R F +LGGV + ++ + G E+ + A
Sbjct: 114 -GEEMSIKALATLTSNFL--RSGAF--YIVQPILGGVDDDGHHIYSIGPGGSVMEEPYNA 168
Query: 158 TGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTI 216
TG G+ A +L ++ E LS E+ + ++ + RD ++ N + I++IT+ G I
Sbjct: 169 TGSGSPFAYGVLEQQFEEGLSNEEAKTVATDAVKSAVERDTASGNGIIISEITDAGVDI 227
>gi|126465836|ref|YP_001040945.1| 20S proteasome subunits A/B [Staphylothermus marinus F1]
gi|302595723|sp|A3DN27.1|PSB2_STAMF RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|126014659|gb|ABN70037.1| 20S proteasome, A and B subunits [Staphylothermus marinus F1]
Length = 208
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 84/173 (48%), Gaps = 2/173 (1%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
V+ T+ V + D +++AAD + GS + +K V++I I + + SG ++D E++
Sbjct: 7 VSKTTTVGIVVGDYVVLAADKRATAGSLVAHKRVKKIIRIDDYIAMTISGLVAD-AEIIA 65
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
I + G + L S L+ ++ N + P L+LGG + +L +
Sbjct: 66 EQARFIARKYKLELGRPIKVSALASNLS-IILNAYLRMSPYIVQLLLGGYDDNGPHLFYI 124
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+ G E+ ++ATG G+ A +L +E+ +LS ++ +L K + RD
Sbjct: 125 DLFGSLSEEKYMATGSGSPTAFGVLEEEYRSDLSLDEAKELAFKAVSAATKRD 177
>gi|13541494|ref|NP_111182.1| proteasome protease subunit beta [Thermoplasma volcanium GSS1]
gi|74575802|sp|Q97AZ7.1|PSB_THEVO RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|14324878|dbj|BAB59804.1| proteasome beta subunit [Thermoplasma volcanium GSS1]
gi|239061209|emb|CAZ48528.1| 20S proteasome beta subunit [Thermoplasma volcanium GSS1]
Length = 211
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 16/200 (8%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V + D ++MA + + + I +K+ +++ I ++ + +G + D Q L+R
Sbjct: 7 TGTTTVGITLTDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRY 66
Query: 86 LD-ELILYD-----NMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
+ EL LY NM P E + L M N+ K+ P L++GG+
Sbjct: 67 MKAELELYRLQRRVNM--------PIEAVATLLSNMLNQV-KYMPYMVQLLVGGIDTSPH 117
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
+ G + ED + +TG G+ +L +++E LS ++GV L+ + + RD +
Sbjct: 118 VFS-IDAAGGSVEDIYASTGSGSPFVYGVLESQYNEKLSIDEGVDLVIRAISAAKQRDSA 176
Query: 200 AVNKLQIAKITEEGTTISQP 219
+ + +A IT++ + P
Sbjct: 177 SGGMIDVAVITKKDGYVQLP 196
>gi|354611438|ref|ZP_09029394.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
gi|353196258|gb|EHB61760.1| proteasome endopeptidase complex, beta subunit [Halobacterium sp.
DL1]
Length = 243
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 92/184 (50%), Gaps = 10/184 (5%)
Query: 36 KDGILMAADMGGSYGS-TIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL-DELILYD 93
+DG++MA+DM S G I K+V++++ I ++ L SG + Q +R+L E LY+
Sbjct: 57 EDGVVMASDMRASLGGRVISNKNVQKVEEIQPNAALSISGSVGGSQAFIRSLRAEANLYE 116
Query: 94 NMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL-VLGGVKNGQKYLGMVSMIGVNFE 152
G + L + + ++ + P + + +LGGV ++ + G +
Sbjct: 117 ARR--GEYMSINALSTMASNLL-----RGGPFFLVVPILGGVDEEGAHVYSLDPGGSSMS 169
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + A G G A +L E+ ++L+ E+ ++ + ++ RD ++ N + I +IT +
Sbjct: 170 DKYTAQGSGMPYALGVLEQEYTDDLTMEEAERVGAQAVQSASERDTASGNGIHITRITAD 229
Query: 213 GTTI 216
G TI
Sbjct: 230 GITI 233
>gi|148362120|gb|ABQ59647.1| PSMB10 [Salmo salar]
gi|209735636|gb|ACI68687.1| Proteasome subunit beta type-7 precursor [Salmo salar]
gi|223646744|gb|ACN10130.1| Proteasome subunit beta type-7 precursor [Salmo salar]
gi|223672599|gb|ACN12481.1| Proteasome subunit beta type-7 precursor [Salmo salar]
gi|262189355|gb|ACY30373.1| PSMB10 [Salmo salar]
Length = 277
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 8/200 (4%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TGT++ + KDG+++ AD + G + K +I I + +G +D ++
Sbjct: 39 PMKTGTTIAGVVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCGAGTAADTEKT 98
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKNGQKY 140
L + +M N P+ + + L +++ R + + SL+LGGV +
Sbjct: 99 TDMLSSNLTIFSMTSGRN---PRVVMAVNILQDMLFRYRGQ---IGASLILGGVDCTGNH 152
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
L V G ++A G G+ A IL D + N+ E+ +L+ + + D +
Sbjct: 153 LYTVGPYGSIDNVPYLAMGSGDLAALGILEDRFKPNMELEEAKELVRDAIHSGIMSDLGS 212
Query: 201 VNKLQIAKITEEGTTISQPY 220
N + I IT++G +PY
Sbjct: 213 GNNIDICVITKQGVDYIRPY 232
>gi|146422381|ref|XP_001487130.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
gi|152060493|sp|A5DB52.1|PSB4_PICGU RecName: Full=Probable proteasome subunit beta type-4
gi|146388251|gb|EDK36409.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 194
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 79/172 (45%), Gaps = 8/172 (4%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD---FQELLRNL 86
V+ ++ +D L+A + G ++ + ++ + + H+L+ SGE D F E ++
Sbjct: 4 VLGIRVEDCTLVATSKAATRGISVLKDTDDKTRQLNSHNLMAYSGEAGDTVQFAEYIQAN 63
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMV 144
+L M ++ L PK S++ + P +++L G G+ L +
Sbjct: 64 TQLY---TMRENDTELSPKATASFVRNQLATSIRSRKPYQVNVLLAGYDTNTGKPSLNWI 120
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+G E + A G+ +L + + +++EDG+ LL+KC++ L R
Sbjct: 121 DYLGTQVELPYAAHGYAGFYCTSLLDKHYKKGMNFEDGLDLLKKCIKELETR 172
>gi|302672727|ref|XP_003026051.1| hypothetical protein SCHCODRAFT_86336 [Schizophyllum commune H4-8]
gi|300099731|gb|EFI91148.1| hypothetical protein SCHCODRAFT_86336 [Schizophyllum commune H4-8]
Length = 274
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V YKDGI++ AD + G + K+ E+I I + +G +D E N
Sbjct: 37 TGTTIVGCVYKDGIVLGADTRATAGPIVADKNCEKIHYIASNIRCCGAGTAAD-TEFTTN 95
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
L + + G + + L ++++ + + +LVLGGV +L V+
Sbjct: 96 LIASNVEMHALTTGRTPRVVTAMTMLKQMLFRYQGH---VGAALVLGGVDPTGAHLFTVA 152
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G + +V G G+ A + W ++++ E+ + L+ + ++ D + + +
Sbjct: 153 PHGSTDKLPYVTMGSGSLAAMAVFETGWKKDMTREEALALVTAAISAGIFNDLGSGSNVD 212
Query: 206 IAKITEEGT 214
IT++GT
Sbjct: 213 ACVITKDGT 221
>gi|73535606|pdb|1YA7|H Chain H, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535607|pdb|1YA7|I Chain I, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535608|pdb|1YA7|J Chain J, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535609|pdb|1YA7|K Chain K, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535610|pdb|1YA7|L Chain L, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535611|pdb|1YA7|M Chain M, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535612|pdb|1YA7|N Chain N, Implications For Interactions Of Proteasome With Pan And
Pa700 From The 1.9 A Structure Of A Proteasome-11s
Activator Complex
gi|73535645|pdb|1YAR|H Chain H, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535646|pdb|1YAR|I Chain I, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535647|pdb|1YAR|J Chain J, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535648|pdb|1YAR|K Chain K, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535649|pdb|1YAR|L Chain L, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535650|pdb|1YAR|M Chain M, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535651|pdb|1YAR|N Chain N, Structure Of Archeabacterial 20s Proteasome Mutant D9s-
Pa26 Complex
gi|73535666|pdb|1YAU|H Chain H, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535667|pdb|1YAU|I Chain I, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535668|pdb|1YAU|J Chain J, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535669|pdb|1YAU|K Chain K, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535670|pdb|1YAU|L Chain L, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535671|pdb|1YAU|M Chain M, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|73535672|pdb|1YAU|N Chain N, Structure Of Archeabacterial 20s Proteasome- Pa26 Complex
gi|282403716|pdb|3IPM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403717|pdb|3IPM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403718|pdb|3IPM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403719|pdb|3IPM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403720|pdb|3IPM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403721|pdb|3IPM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
gi|282403722|pdb|3IPM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With The C- Terminus Of Pan
Length = 217
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V + KD ++MA + + + I +K+ +++ I ++ + +G + D Q L+R
Sbjct: 7 TGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRY 66
Query: 86 LD-ELILYD-----NMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
+ EL LY NM P E + L M N+ K+ P L++GG+
Sbjct: 67 MKAELELYRLQRRVNM--------PIEAVATLLSNMLNQV-KYMPYMVQLLVGGIDTAPH 117
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
+ G + ED + +TG G+ +L ++ E ++ ++GV L+ + + RD +
Sbjct: 118 VFS-IDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSA 176
Query: 200 AVNKLQIAKITEEGTTISQP 219
+ + +A IT + + P
Sbjct: 177 SGGMIDVAVITRKDGYVQLP 196
>gi|219125785|ref|XP_002183153.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405428|gb|EEC45371.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 197
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 84/195 (43%), Gaps = 5/195 (2%)
Query: 22 LPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQE 81
L + GT+ ++ ++ GI+ A D S GS + K+ +++ PI H L +G +D
Sbjct: 1 LEFAHGTTTLSFVFQGGIVAAVDSRASLGSFVGSKTTQKVLPINSHMLGTMAGGAADCSF 60
Query: 82 LLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG----GVKNG 137
+R L + DG + L+ +Y+ R K ++V+G K+
Sbjct: 61 WIRKLQGEAAMHVLTLDGRRMSVARASRLLSNALYDNR-KLGLSVGTMVMGFDDTETKSS 119
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+ + V G E A G G+ A IL E +L+ ++ V L K +R +RD
Sbjct: 120 RARIFYVDNSGTRIEGDVFAVGSGSTFALGILDTEKRHDLTVDEAVALGLKAIRHATFRD 179
Query: 198 RSAVNKLQIAKITEE 212
+ + + IT E
Sbjct: 180 AYSGGFINVYLITHE 194
>gi|16081708|ref|NP_394085.1| proteasome, beta chain [Thermoplasma acidophilum DSM 1728]
gi|130867|sp|P28061.1|PSB_THEAC RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|1633360|pdb|1PMA|B Chain B, Proteasome From Thermoplasma Acidophilum
gi|1633374|pdb|1PMA|P Chain P, Proteasome From Thermoplasma Acidophilum
gi|1633375|pdb|1PMA|Q Chain Q, Proteasome From Thermoplasma Acidophilum
gi|1633376|pdb|1PMA|R Chain R, Proteasome From Thermoplasma Acidophilum
gi|1633377|pdb|1PMA|S Chain S, Proteasome From Thermoplasma Acidophilum
gi|1633378|pdb|1PMA|T Chain T, Proteasome From Thermoplasma Acidophilum
gi|1633379|pdb|1PMA|U Chain U, Proteasome From Thermoplasma Acidophilum
gi|1633380|pdb|1PMA|V Chain V, Proteasome From Thermoplasma Acidophilum
gi|1633381|pdb|1PMA|W Chain W, Proteasome From Thermoplasma Acidophilum
gi|1633382|pdb|1PMA|X Chain X, Proteasome From Thermoplasma Acidophilum
gi|1633383|pdb|1PMA|Y Chain Y, Proteasome From Thermoplasma Acidophilum
gi|1633384|pdb|1PMA|Z Chain Z, Proteasome From Thermoplasma Acidophilum
gi|1633385|pdb|1PMA|1 Chain 1, Proteasome From Thermoplasma Acidophilum
gi|1633386|pdb|1PMA|2 Chain 2, Proteasome From Thermoplasma Acidophilum
gi|154680|gb|AAA72102.1| proteasome beta-subunit [Thermoplasma acidophilum]
gi|10639779|emb|CAC11751.1| proteasome, beta chain [Thermoplasma acidophilum]
Length = 211
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 95/200 (47%), Gaps = 16/200 (8%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+ V + KD ++MA + + + I +K+ +++ I ++ + +G + D Q L+R
Sbjct: 7 TGTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRY 66
Query: 86 LD-ELILYD-----NMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
+ EL LY NM P E + L M N+ K+ P L++GG+
Sbjct: 67 MKAELELYRLQRRVNM--------PIEAVATLLSNMLNQV-KYMPYMVQLLVGGIDTAPH 117
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
+ G + ED + +TG G+ +L ++ E ++ ++GV L+ + + RD +
Sbjct: 118 VFS-IDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSA 176
Query: 200 AVNKLQIAKITEEGTTISQP 219
+ + +A IT + + P
Sbjct: 177 SGGMIDVAVITRKDGYVQLP 196
>gi|198470471|ref|XP_001355321.2| GA14896 [Drosophila pseudoobscura pseudoobscura]
gi|198145466|gb|EAL32378.2| GA14896 [Drosophila pseudoobscura pseudoobscura]
Length = 327
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 12/195 (6%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TGTS+V + Y+DG+++ AD + G + K+ +I + H +G +D + +
Sbjct: 44 PVRTGTSIVGIIYRDGVILGADTRATEGPMVSDKNCSKIHYLQNHIYCCGAGTAADTEMI 103
Query: 83 -LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF---DPLWNSLVLGGVKNGQ 138
L +L L+ + K L + + RR F + +LV+GGV
Sbjct: 104 TLTTSSQLNLHQ--------MSTKRLVPVVCASIMLRRTLFRYQGHIGAALVVGGVDRWG 155
Query: 139 KYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDR 198
+ G N + + A G G A +L W +L E G +L+ + + ++ D
Sbjct: 156 PQIYCNHSCGSNDKLPYAAMGSGTLAAMTVLEHGWKPDLDLEQGKQLVREAISAGVFNDL 215
Query: 199 SAVNKLQIAKITEEG 213
+ + + + IT+ G
Sbjct: 216 GSGSNIDLCVITKAG 230
>gi|195169339|ref|XP_002025479.1| GL15166 [Drosophila persimilis]
gi|194108958|gb|EDW31001.1| GL15166 [Drosophila persimilis]
Length = 327
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 85/195 (43%), Gaps = 12/195 (6%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TGTS+V + Y+DG+++ AD + G + K+ +I + H +G +D + +
Sbjct: 44 PVRTGTSIVGIIYRDGVILGADTRATEGPMVSDKNCSKIHYLQNHIYCCGAGTAADTEMI 103
Query: 83 -LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF---DPLWNSLVLGGVKNGQ 138
L +L L+ + K L + + RR F + +LV+GGV
Sbjct: 104 TLTTSSQLNLHQ--------MSTKRLVPVVCASIMLRRTLFRYQGHIGAALVVGGVDRWG 155
Query: 139 KYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDR 198
+ G N + + A G G A +L W +L E G +L+ + + ++ D
Sbjct: 156 PQIYCNHSCGSNDKLPYAAMGSGTLAAMTVLEHGWKPDLDLEQGKQLVREAISAGVFNDL 215
Query: 199 SAVNKLQIAKITEEG 213
+ + + + IT+ G
Sbjct: 216 GSGSNIDLCVITKAG 230
>gi|322370361|ref|ZP_08044920.1| proteasome endopeptidase complex, beta subunit [Haladaptatus
paucihalophilus DX253]
gi|320550069|gb|EFW91724.1| proteasome endopeptidase complex, beta subunit [Haladaptatus
paucihalophilus DX253]
Length = 240
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 88/183 (48%), Gaps = 8/183 (4%)
Query: 37 DGILMAADMGGSY-GSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD-ELILYDN 94
DG++MA DM S G + K+V++++ I + L +G + Q +R + E LY++
Sbjct: 55 DGVVMATDMRASLAGRFVSNKNVQKVEQIHPTAALTMAGSVGGAQSFIRTMRIESNLYES 114
Query: 95 MWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDS 154
G + + L + ++ R F S +LGG+ ++ + G D
Sbjct: 115 RR--GEQMSMQALSTLAGNML--RGGPF--FMVSPILGGIDEEGSHIYSLDPAGGVMSDD 168
Query: 155 HVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGT 214
+ TG G LA +L ++ E LS E+ + + ++ + RD + N + +A+ITEEG
Sbjct: 169 YTVTGSGMQLAYGVLEQDYEEGLSNEEAKMVAARGIKSAVERDTGSGNGVFLAEITEEGV 228
Query: 215 TIS 217
I+
Sbjct: 229 DIT 231
>gi|194769458|ref|XP_001966821.1| GF19078 [Drosophila ananassae]
gi|190618342|gb|EDV33866.1| GF19078 [Drosophila ananassae]
Length = 569
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 89/196 (45%), Gaps = 9/196 (4%)
Query: 22 LPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQE 81
+P TGT+++AL+Y G+++ AD S GS + ++ +++ + SG +D Q
Sbjct: 11 IPVSTGTTIMALEYAHGVVLGADSRTSAGSYVANRASDKLTEVADRIYCCRSGSAADTQA 70
Query: 82 LLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV---KNGQ 138
+ + + Y + + G E + Y RN L +++ G K GQ
Sbjct: 71 VADLVSHSLNY-HQYQFGRPPTVWEAACDFRHLCYTYRNN---LLAGIIVAGYDDKKGGQ 126
Query: 139 KYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDR 198
Y + + G+ + G G+ + D++ + S E V + KC+++ ++ D
Sbjct: 127 VY--SIPLGGMLVREPCTIGGSGSSYIFGYVHDQYRPDFSKEQCVAFIRKCIQLAIHHDG 184
Query: 199 SAVNKLQIAKITEEGT 214
S+ ++IA IT +G
Sbjct: 185 SSGGVIRIAIITADGV 200
>gi|148229244|ref|NP_001088741.1| proteasome (prosome, macropain) subunit, beta type, 3 [Xenopus
laevis]
gi|56270462|gb|AAH87395.1| LOC496005 protein [Xenopus laevis]
Length = 205
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 88/185 (47%), Gaps = 10/185 (5%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G +++A+K KD + +AAD + + ++I P+G+ +G +G +D Q + + L
Sbjct: 8 GGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGERLYIGLAGLATDVQTVAQRL 67
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV--KNGQKYLGM 143
L LY+ +G + PK S + ++Y RR F P + V+ G+ K Q ++
Sbjct: 68 KFRLNLYE--LKEGRQIKPKTFMSMVANLLYERR--FGPYYIEPVIAGLDPKTFQPFICS 123
Query: 144 VSMIGVNFE-DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ +IG E + V +G + + W ++ ED + + + M L DR AV+
Sbjct: 124 LDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAM--LNAVDRDAVS 181
Query: 203 KLQIA 207
+ +
Sbjct: 182 GMGVV 186
>gi|448345261|ref|ZP_21534158.1| proteasome endopeptidase complex, beta subunit [Natrinema altunense
JCM 12890]
gi|445635259|gb|ELY88429.1| proteasome endopeptidase complex, beta subunit [Natrinema altunense
JCM 12890]
Length = 243
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P +L+G+ G F LR E+ LY
Sbjct: 58 DGVIIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ +G S+ L + N +LGGV + ++ + G E
Sbjct: 116 EARRGEGMSI------DALATLAGNFARGGPFFAIHPILGGVDDEGSHVYSIDPAGGVME 169
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA L + ++S E+ + + ++ + RD + N + +A+IT+E
Sbjct: 170 DDYTVTGSGMQLAYGHLEQAYEPDMSNEEAKTVAARGIKSAVERDTGSGNGVFLAEITDE 229
Query: 213 GTTI 216
G I
Sbjct: 230 GVDI 233
>gi|145513030|ref|XP_001442426.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409779|emb|CAK75029.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 98/192 (51%), Gaps = 13/192 (6%)
Query: 29 SVVALKYKDGILMAADMGGSYGSTIRYKSVE-RIKPIGKHSLLGASGEISD---FQELLR 84
S+ L+ D +++A D G S ++ K E +I + H + G SGE +D F E++
Sbjct: 3 SIFGLQGGDFVIVACD-GSIAHSILKIKETEDKILKLDDHKIFGISGEGADRNSFGEIVH 61
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNR--RNKFDPLWNSLVLGGV-KNGQKYL 141
LI Y G + +E ++ R MY + R++ P + +LGGV +G L
Sbjct: 62 KNHCLIRYKT----GGYMNLQET-AHFVRSMYAQAIRSRDGPHQCNGLLGGVDSDGTPSL 116
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ +G + + A G+ N+ +L +++ NL+ E+G+++++KC++ L R A
Sbjct: 117 YWLDYLGSLQKITRGAQGYANYFLLGLLDNQYKPNLTKEEGIEIIKKCIKELQTRFLIAQ 176
Query: 202 NKLQIAKITEEG 213
NK + +T++G
Sbjct: 177 NKFIVKIVTKQG 188
>gi|451980227|ref|ZP_21928625.1| putative Proteasome, beta subunit [Nitrospina gracilis 3/211]
gi|451762641|emb|CCQ89854.1| putative Proteasome, beta subunit [Nitrospina gracilis 3/211]
Length = 267
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 80/169 (47%), Gaps = 15/169 (8%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ +QL + GT+V+A YKDG+++A D + G+ I Y +++ PI +SL+ +G
Sbjct: 34 PVDASQL--MHGTTVLAFHYKDGVVVAGDRRATAGNAIMYDRCDKVIPIDDYSLMAIAGV 91
Query: 76 ISDFQELLRNLDELILY------DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSL 129
+ E+ R L Y ++ +G +L + P++ S
Sbjct: 92 PATAFEMARILSHNFEYYRRSQLQSLSTEGKIRALSKLLKDNMGMAIQGVGAVSPIFASY 151
Query: 130 VLGGVKNGQKYLGMVSMIGVNFE-DSHVATGFGNHLARPILRDEWHENL 177
L K + Y+ ++G NFE +H ATG G+ + R +L HE+L
Sbjct: 152 DL---KEKKAYIYFYDLLGANFEIRTHTATGSGSPVIRGVLE---HEDL 194
>gi|59275969|dbj|BAD89555.1| proteasome subunit [Oncorhynchus mykiss]
Length = 277
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 8/200 (4%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TGT++ + KDG+++ AD + G + K +I I + +G +D ++
Sbjct: 39 PMKTGTTIAGIVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCGAGTAADTEKT 98
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKNGQKY 140
L + +M N P+ + + L +++ R + + SL+LGGV +
Sbjct: 99 TDLLSSNLTIFSMNSGRN---PRVVMAVNILQDMLFRYRGQ---IGASLILGGVDCTGNH 152
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
L V G ++A G G+ A IL D + N+ E+ +L+ + + D +
Sbjct: 153 LYTVGPYGSIDNVPYLAMGSGDLAALGILEDRFKPNMELEEAKQLVRDAIHSGIMSDLGS 212
Query: 201 VNKLQIAKITEEGTTISQPY 220
N + I IT++G +PY
Sbjct: 213 GNNIDICVITKQGVDYIRPY 232
>gi|448706042|ref|ZP_21700886.1| proteasome endopeptidase complex subunit beta [Halobiforma
nitratireducens JCM 10879]
gi|445794984|gb|EMA45521.1| proteasome endopeptidase complex subunit beta [Halobiforma
nitratireducens JCM 10879]
Length = 242
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 86/185 (46%), Gaps = 12/185 (6%)
Query: 36 KDGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELIL 91
+DG+++A DM GG + S + VE+I P G +L+G+ G F LR E+ L
Sbjct: 56 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRA--EVNL 113
Query: 92 YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
Y++ G + + L + + R F + +LGGV ++ + G
Sbjct: 114 YESRR--GEDMSIEALANLAGN--FARGGPFFAIH--PILGGVDEDGSHVYSIDPAGGVM 167
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
ED + TG G LA L + ++L+ ++ + + ++ RD + N + + +IT+
Sbjct: 168 EDDYTVTGSGMQLAYGHLEQSYEDDLTNDEATTIAARSIKSAAERDTGSGNGVFLCEITD 227
Query: 212 EGTTI 216
EG I
Sbjct: 228 EGVDI 232
>gi|330921364|ref|XP_003299395.1| hypothetical protein PTT_10371 [Pyrenophora teres f. teres 0-1]
gi|311326978|gb|EFQ92531.1| hypothetical protein PTT_10371 [Pyrenophora teres f. teres 0-1]
Length = 276
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 6/196 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + G+++AAD + G + K+ E++ I +G +D +
Sbjct: 28 TGTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHYIAPQIWCAGAGTAADTE----- 82
Query: 86 LDELILYDNMWDDGNSLGPK-ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
I+ N+ S G K + + +T + + + LV+ GV +L V
Sbjct: 83 FTTAIISSNLELHALSTGRKPRVVTCMTMLKQHLFRHQGHIGAYLVVAGVDPTGAHLFTV 142
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + +V G G+ A + +W +L+ ED V L + ++ D + + +
Sbjct: 143 HAHGSTDKLPYVTMGSGSLAAMSVFETQWKADLTREDAVTLCANAIEAGIWNDLGSGSNV 202
Query: 205 QIAKITEEGTTISQPY 220
+A ITEE TT+ + Y
Sbjct: 203 DVAVITEEKTTLMRNY 218
>gi|189200881|ref|XP_001936777.1| proteasome subunit beta type-9 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983876|gb|EDU49364.1| proteasome subunit beta type-9 precursor [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 254
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 86/196 (43%), Gaps = 6/196 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + G+++AAD + G + K+ E++ I +G +D +
Sbjct: 28 TGTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHYIAPQIWCAGAGTAADTE----- 82
Query: 86 LDELILYDNMWDDGNSLGPK-ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
I+ N+ S G K + + +T + + + LV+ GV +L V
Sbjct: 83 FTTAIISSNLELHALSTGRKPRVVTCMTMLKQHLFRHQGHIGAYLVVAGVDPTGAHLFTV 142
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + +V G G+ A + +W +L+ ED V L + ++ D + + +
Sbjct: 143 HAHGSTDKLPYVTMGSGSLAAMSVFETQWKGDLTREDAVTLCANAIEAGIWNDLGSGSNV 202
Query: 205 QIAKITEEGTTISQPY 220
+A ITEE TT+ + Y
Sbjct: 203 DVAVITEEKTTLMRNY 218
>gi|448305355|ref|ZP_21495287.1| proteasome endopeptidase complex subunit beta [Natronorubrum
sulfidifaciens JCM 14089]
gi|445589202|gb|ELY43438.1| proteasome endopeptidase complex subunit beta [Natronorubrum
sulfidifaciens JCM 14089]
Length = 243
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISSLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ G ++ L + + R F + +LGGV + ++ + G E
Sbjct: 116 EARR--GETMSIDALATLAGN--FARGGPFFAIHP--ILGGVDDDGSHVYSIDPAGGVME 169
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA L + +++S E+ + + ++ + RD + N + + +IT+E
Sbjct: 170 DDYTVTGSGMQLAYGHLEQAYEDDMSNEEAKTVAARGIKSAVERDTGSGNGVFLCEITDE 229
Query: 213 GTTI 216
G I
Sbjct: 230 GVDI 233
>gi|308470159|ref|XP_003097314.1| CRE-PBS-2 protein [Caenorhabditis remanei]
gi|308240286|gb|EFO84238.1| CRE-PBS-2 protein [Caenorhabditis remanei]
Length = 290
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 90/202 (44%), Gaps = 20/202 (9%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++VA YK G++M AD + G+ I K E++ + + +G +D ++ +
Sbjct: 58 TGTTIVAAAYKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACGAGTAADLDQVTKM 117
Query: 86 LDELILYDNMWDDGNSLGPKELHS-YLTRVMYNRRNKFDPLWN-------SLVLGGVKNG 137
L GN L EL++ RV+ R L+N L++GGV
Sbjct: 118 L-----------SGN-LRLMELNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVDPT 165
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+L M S G A G G++ A IL ++ +++ E+ L+++ ++ ++ D
Sbjct: 166 GPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKPDMTKEEAESLVQRALQAGMHGD 225
Query: 198 RSAVNKLQIAKITEEGTTISQP 219
++ N L + I T P
Sbjct: 226 NASGNSLNLVIIEPNETVFKGP 247
>gi|303314849|ref|XP_003067433.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240107101|gb|EER25288.1| proteasome component, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|320037788|gb|EFW19725.1| proteasome component Pre1 [Coccidioides posadasii str. Silveira]
Length = 205
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD---FQELLRNLDELILY 92
KD L+AA G TI + ++ + + KH+LL SGE D F E ++ +L
Sbjct: 10 KDFTLIAASKAAMRGPTILKSTDDKTRKLNKHTLLAYSGEAGDTVQFAEYIQANAQLYSM 69
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN-GQK-------YLGMV 144
N + S + L R + +R P +L+LGGV QK YL +
Sbjct: 70 RNETELSPSAVANFVRGELARSLRSR----SPYTVNLLLGGVDPITQKPSLYWLDYLASL 125
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+ + + A G+ + IL H ++SYE+G+KLLEKC L R
Sbjct: 126 AQV------PYAAHGYAQYYCLSILDKHHHPDISYEEGLKLLEKCTDELKRR 171
>gi|209738272|gb|ACI70005.1| Proteasome subunit beta type-7 precursor [Salmo salar]
Length = 254
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 8/197 (4%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TGT++ + KDG+++ AD + G + K +I I + +G +D ++
Sbjct: 39 PMKTGTTIAGVVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCGAGTAADTEKT 98
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKNGQKY 140
L + +M N P+ + + L V++ R + + SL+LGGV +
Sbjct: 99 TDMLSSNLTIFSMTSGRN---PRVVMAVNILQDVLFRYRGQ---IGASLILGGVDCTGNH 152
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
L V G ++A G G+ A IL D + N+ E+ +L+ + + D +
Sbjct: 153 LYTVGPYGSIDNVPYLAMGSGDLAALGILEDRFKPNMELEEAKELVRDAIHSGIMSDLGS 212
Query: 201 VNKLQIAKITEEGTTIS 217
N + I IT++G T S
Sbjct: 213 GNNIDICVITKQGWTTS 229
>gi|225705124|gb|ACO08408.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
Length = 277
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 89/200 (44%), Gaps = 8/200 (4%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TGT++ + KDG+++ AD + G + K +I I + +G +D ++
Sbjct: 39 PMKTGTTIAGVVCKDGVVLGADTRATSGEVVADKMCAKIHYISPNMYCCGAGTAADTEKT 98
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKNGQKY 140
L + +M N P+ + + L +++ R + + SL+LGGV +
Sbjct: 99 TDLLSSNLTIFSMNSGRN---PRVVMAVNILQDMLFRYRGQ---IGASLILGGVDCTGNH 152
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
L V G ++A G G+ A IL D + N+ E+ +L+ + + D +
Sbjct: 153 LYTVGPYGSIDNVPYLAMGSGDLAALGILEDRFKPNMELEEAKQLVRDAIHSGIMSDLGS 212
Query: 201 VNKLQIAKITEEGTTISQPY 220
N + I IT++G +PY
Sbjct: 213 GNNIDICVITKQGVDYIRPY 232
>gi|448391971|ref|ZP_21567066.1| proteasome endopeptidase complex subunit beta [Haloterrigena salina
JCM 13891]
gi|445665383|gb|ELZ18061.1| proteasome endopeptidase complex subunit beta [Haloterrigena salina
JCM 13891]
Length = 267
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 56 KSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRV- 114
+ VE+I P G +L+G+ G F LR+ E+ LY++ + P + + T
Sbjct: 105 QKVEQIHPTGALTLVGSVGGAQSFIRTLRS--EVNLYESRRGE-----PMPIEALATLAG 157
Query: 115 MYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWH 174
+ R F + + +LGGV ++ + G ED + TG G LA +L E+
Sbjct: 158 NFARGGPFRAI--NPILGGVDAEGNHVYSIDPAGGVMEDDYTVTGSGMQLAYGLLEQEYE 215
Query: 175 ENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTI 216
E LS E+ + + + + RD + N + +A +T+EG I
Sbjct: 216 EGLSLEEAQSVAARAIESAVERDTGSGNGVFLAAVTDEGVDI 257
>gi|401410082|ref|XP_003884489.1| Proteasome subunit beta type-7, related [Neospora caninum
Liverpool]
gi|325118907|emb|CBZ54459.1| Proteasome subunit beta type-7, related [Neospora caninum
Liverpool]
Length = 242
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 91/194 (46%), Gaps = 9/194 (4%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TGT++VA+ ++ G+++ AD S GS + ++ +I + + + SG +D Q +
Sbjct: 38 PVSTGTTIVAVSFQGGVVLGADTRTSAGSYVVNRAARKISRVHERMCVCRSGSAADTQAV 97
Query: 83 LRNLDELI-LYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG---VKNGQ 138
+ + I Y G + + + Y + D L L++ G VK GQ
Sbjct: 98 TQIVKLYIQQYAQELPKGEEPRVEAAANVFQSLCYQHK---DALTAGLIVAGYDKVKGGQ 154
Query: 139 KYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDR 198
Y + + G ++ A G G+ + + +N++ ++ V+L++K + + RD
Sbjct: 155 IY--AIPLGGALMPMNYTAGGSGSAFISAFMDANFKDNMTQQEAVELVKKSVAYAISRDG 212
Query: 199 SAVNKLQIAKITEE 212
S+ ++I IT++
Sbjct: 213 SSGGMIRIVVITKD 226
>gi|18312192|ref|NP_558859.1| proteasome subunit beta [Pyrobaculum aerophilum str. IM2]
gi|74565305|sp|Q8ZYF2.1|PSB1_PYRAE RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|18159629|gb|AAL63041.1| proteasome beta subunit [Pyrobaculum aerophilum str. IM2]
Length = 202
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
T+ V + KDG+++A D + G I +K E+I I H SG ++D Q +L L
Sbjct: 2 TTTVGIAVKDGVVLATDKRVTAGYYIAHKRGEKIWKIDDHVAATMSGGVADLQSVLSFL- 60
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ-KYLGMVSM 146
L ++ + + L +Y++ +++ R + + ++GGV + L MV
Sbjct: 61 TLRAHEYKIEYKRPIPISALVNYMSLILFYSRPYIYIVHS--IIGGVDEEEGAVLYMVDW 118
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
+G ++ ++ATG G+ A+ L + E+++ ED V L K ++ + D + + +
Sbjct: 119 LGTVTKEKYIATGSGSPYAKGALEVGYREDMTLEDAVDLAIKAVKAAIRNDPGSGEGIDV 178
Query: 207 AKITEE 212
IT +
Sbjct: 179 VVITRK 184
>gi|448328326|ref|ZP_21517639.1| proteasome endopeptidase complex, beta subunit [Natrinema
versiforme JCM 10478]
gi|445616132|gb|ELY69764.1| proteasome endopeptidase complex, beta subunit [Natrinema
versiforme JCM 10478]
Length = 243
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 82/184 (44%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P +L+G+ G F LR E+ LY
Sbjct: 58 DGVIIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ +G S+ L + N +LGGV ++ + G E
Sbjct: 116 EARRGEGMSI------DALATLAGNFARGGPFFAIHPILGGVDEEGSHVYSIDPAGGVME 169
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA L + ++S E+ + + ++ + RD + N + +A+IT+E
Sbjct: 170 DDYTVTGSGMQLAYGHLEQAYEPDMSNEEAKTVAARGIKSAVERDTGSGNGVFLAEITDE 229
Query: 213 GTTI 216
G I
Sbjct: 230 GVDI 233
>gi|433591793|ref|YP_007281289.1| proteasome endopeptidase complex, archaeal, beta subunit [Natrinema
pellirubrum DSM 15624]
gi|448334129|ref|ZP_21523310.1| proteasome endopeptidase complex, beta subunit [Natrinema
pellirubrum DSM 15624]
gi|433306573|gb|AGB32385.1| proteasome endopeptidase complex, archaeal, beta subunit [Natrinema
pellirubrum DSM 15624]
gi|445620471|gb|ELY73968.1| proteasome endopeptidase complex, beta subunit [Natrinema
pellirubrum DSM 15624]
Length = 243
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 86/184 (46%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ G ++ + L + + R F + +LGGV + ++ + G E
Sbjct: 116 EARR--GENMSIEALATLAGN--FARGGPFFAIHP--ILGGVDDEGSHVYSIDPAGGVME 169
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA L + ++S E+ + + ++ + RD + N + + +IT+E
Sbjct: 170 DDYTVTGSGMQLAYGHLEQAYEPDMSTEEAKTVAARGIKSAVERDTGSGNGVFLCEITDE 229
Query: 213 GTTI 216
G I
Sbjct: 230 GVDI 233
>gi|145256902|ref|XP_001401555.1| proteasome subunit beta type-2 [Aspergillus niger CBS 513.88]
gi|134058465|emb|CAL00674.1| unnamed protein product [Aspergillus niger]
Length = 203
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 70/156 (44%), Gaps = 3/156 (1%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNM 95
KD +++AA G TI ++ K + +H+L+ SGE D + + I M
Sbjct: 10 KDFVILAASKAAMRGPTILKAEDDKTKQLNEHNLMAFSGEAGDTVQFAEYIQANIQLYTM 69
Query: 96 WDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK--NGQKYLGMVSMIGVNFED 153
+D LGP + S++ M +P +L+LGGV + +L + +
Sbjct: 70 RND-TELGPSAVASFVRGEMARSLRSRNPYTVNLLLGGVDPITQKPHLYWIDYLASLAPV 128
Query: 154 SHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKC 189
+ A G+ + L H ++S E+G+KLLE C
Sbjct: 129 PYAAHGYAQYYCLSTLDKHHHPDISLEEGMKLLEMC 164
>gi|401827855|ref|XP_003888220.1| proteasome beta type-6 subunit [Encephalitozoon hellem ATCC 50504]
gi|392999420|gb|AFM99239.1| proteasome beta type-6 subunit [Encephalitozoon hellem ATCC 50504]
Length = 202
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 86/191 (45%), Gaps = 10/191 (5%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+TGT+++A+KY DG+L+ AD S G+ I + +++ I + SG +D Q +
Sbjct: 7 MTGTTIIAIKYDDGVLIGADSRTSMGTYIPSRVTDKLTQITGKIFVCRSGSAADTQTISE 66
Query: 85 NLDELILYDNMWDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
L +Y M+ + P + ++++Y + L L++ G +
Sbjct: 67 YLK---MYLKMYSQLENAAPLVHRAATLASKIIYENPS----LLAGLIVAGYDEKPRIFN 119
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+S+ G E G G+ W +S E+G++ ++ + + RD ++
Sbjct: 120 -ISLGGTLMECDWTIGGSGSAFIYSYCDMNWRSGMSLEEGIRFIKDAVTCAISRDNASGG 178
Query: 203 KLQIAKITEEG 213
++++ IT +G
Sbjct: 179 CIRMSAITRDG 189
>gi|429193506|ref|YP_007179184.1| proteasome endopeptidase complex subunit beta [Natronobacterium
gregoryi SP2]
gi|429137724|gb|AFZ74735.1| proteasome endopeptidase complex, archaeal, beta subunit
[Natronobacterium gregoryi SP2]
Length = 242
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 12/185 (6%)
Query: 36 KDGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELIL 91
+DG+++A DM GG + S + VE+I P G +L+G+ G F LR E+ L
Sbjct: 56 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRA--EVNL 113
Query: 92 YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
Y++ G + + L + + R F + +LGGV ++ + G
Sbjct: 114 YESRR--GEDMSIEALANLAGN--FARGGPFFAIHP--ILGGVDEEGSHVFSIDPAGGVM 167
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
ED + TG G LA L + ++LS ++ + + ++ RD + N + + +IT
Sbjct: 168 EDDYTVTGSGMQLAYGHLEQAYEDDLSNDEATTIAARSIKSAAERDTGSGNGVFLCEITG 227
Query: 212 EGTTI 216
EG I
Sbjct: 228 EGVDI 232
>gi|448377612|ref|ZP_21560308.1| 20S proteasome subunits A/B [Halovivax asiaticus JCM 14624]
gi|445655556|gb|ELZ08401.1| 20S proteasome subunits A/B [Halovivax asiaticus JCM 14624]
Length = 235
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 89/195 (45%), Gaps = 16/195 (8%)
Query: 24 YVTGTSVVALKYKDGILMAAD----MGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
+ TGT++VAL DG+++ AD +GG + + +S +++PIG+ + + SG +SD
Sbjct: 20 FSTGTTIVALGGDDGVVLGADARVSLGGRF---VTNRSARKVEPIGERAAVAFSGGVSDA 76
Query: 80 QELLRNL-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ 138
Q ++ L E LY D G + L + R++ N +F + L+LGGV
Sbjct: 77 QSVVDQLRTERQLY--KLDHGRPMPTDALATTAGRLIRN--GQFRSI--GLLLGGVDESA 130
Query: 139 KYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDR 198
Y + G D++ A G G LA L + D + + RD
Sbjct: 131 VY--WIDGGGGVMRDAYAANGSGMQLAYGALEGAYEPARPVSDLRPIAADALAAAAERDV 188
Query: 199 SAVNKLQIAKITEEG 213
++ + + I IT EG
Sbjct: 189 ASGDGMTITTITGEG 203
>gi|384483124|gb|EIE75304.1| proteasome subunit beta type-7 [Rhizopus delemar RA 99-880]
Length = 269
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 4/189 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V L YKDGI + AD + G + K+ E+I I + +G +D E N
Sbjct: 36 TGTTIVGLIYKDGICLGADTRATEGPIVADKNCEKIHYIAPNIYCCGAGTAAD-TEFTTN 94
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
L + + G + L +++Y + + +LVLGG L V
Sbjct: 95 LISSQIELHSLATGRKPRVATAMTLLKQMLYKYQGH---IGAALVLGGFDVTGPQLYTVY 151
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G +V G G+ A + +W N++ E+ + L+ + + ++ D + + +
Sbjct: 152 PHGSTDNLPYVTMGSGSLAAMSVFESKWKPNMNREEAIDLVREAIEAGIFNDLGSGSNVD 211
Query: 206 IAKITEEGT 214
+ IT++ T
Sbjct: 212 VCVITKDST 220
>gi|307595676|ref|YP_003901993.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
gi|307550877|gb|ADN50942.1| Proteasome endopeptidase complex [Vulcanisaeta distributa DSM
14429]
Length = 205
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 95/190 (50%), Gaps = 4/190 (2%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+TGT+V +K DG+++AA+ +YG T+ +S +++ + + + + G ++D Q +L
Sbjct: 8 ITGTAV-GIKASDGVVLAAEKRVAYGFTMFSRSGKKVFKVNDNIGIASIGILADMQ-VLT 65
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+ + + D + L+ V++ N+ P + +++GGV + +L ++
Sbjct: 66 KIAKAYMSLYALDTKTRPSIRSAAKLLSYVLF--ANRVLPYFVEVLVGGVDDEGPHLFIM 123
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
+G ED + A G G LA IL + +++ ++ +L K + + RD + + +
Sbjct: 124 DSLGSLIEDDYAAVGTGTKLAIAILESNYKPSMTVKEARELAIKAINQSISRDPVSGDGI 183
Query: 205 QIAKITEEGT 214
I IT G+
Sbjct: 184 DILTITGNGS 193
>gi|145534101|ref|XP_001452795.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420494|emb|CAK85398.1| unnamed protein product [Paramecium tetraurelia]
Length = 194
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 98/195 (50%), Gaps = 13/195 (6%)
Query: 29 SVVALKYKDGILMAADMGGSYGSTIRYKSVE-RIKPIGKHSLLGASGEISD---FQELLR 84
S+ L+ D +++A D G S ++ K E +I + H + G SGE +D F E++
Sbjct: 3 SIFGLQGGDFVIIACD-GSIAHSILKIKETEDKILKLDDHKIFGISGEGADRNSFGEIVH 61
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNR--RNKFDPLWNSLVLGGV-KNGQKYL 141
LI Y G + +E ++ R MY + R++ P + +LGGV +G L
Sbjct: 62 KNHCLIRYKT----GGYMNLQET-AHFVRSMYAQAIRSRDGPHQCNGLLGGVDSDGTPSL 116
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ +G + + A G+ N+ +L +++ NL E+G+++++KC++ L R A
Sbjct: 117 YWLDYLGSLQKITRGAQGYANYFLLGLLDNQYKPNLIKEEGIEIIKKCIKELQTRFLIAQ 176
Query: 202 NKLQIAKITEEGTTI 216
NK + +T++G +
Sbjct: 177 NKFIVKIVTKQGIEV 191
>gi|159041041|ref|YP_001540293.1| proteasome endopeptidase complex protein [Caldivirga maquilingensis
IC-167]
gi|302595700|sp|A8MBW0.1|PSB1_CALMQ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|157919876|gb|ABW01303.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
Length = 206
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 85/180 (47%), Gaps = 5/180 (2%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNM 95
K+G+++A D + G I ++ +I I H+ SG ++D Q +L L L + +
Sbjct: 23 KEGVVLATDRRVTAGYYIAHRKGRKIWKIDNHAAATMSGAVADVQMILNELTHLAMNYRI 82
Query: 96 WDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ-KYLGMVSMIG-VNFED 153
+ K L +Y + VM+ R +++GGV N + L V G E+
Sbjct: 83 THQA-PVPIKTLANYASVVMFYSRPMI--YIAHMIIGGVDNEEGPVLYAVDWYGSFTREE 139
Query: 154 SHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEG 213
++TG G+ A +L D + +++S +D VKL + +R + D + + + IT+E
Sbjct: 140 RFMSTGSGSPTAFGVLEDGYRDDMSLDDAVKLATRAVRAAMLHDPGSGEGVDVITITKEA 199
>gi|448323944|ref|ZP_21513387.1| proteasome endopeptidase complex subunit beta [Natronobacterium
gregoryi SP2]
gi|445619946|gb|ELY73457.1| proteasome endopeptidase complex subunit beta [Natronobacterium
gregoryi SP2]
Length = 231
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 85/185 (45%), Gaps = 12/185 (6%)
Query: 36 KDGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELIL 91
+DG+++A DM GG + S + VE+I P G +L+G+ G F LR E+ L
Sbjct: 45 EDGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISTLRA--EVNL 102
Query: 92 YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNF 151
Y++ G + + L + + R F + +LGGV ++ + G
Sbjct: 103 YESRR--GEDMSIEALANLAGN--FARGGPFFAIHP--ILGGVDEEGSHVFSIDPAGGVM 156
Query: 152 EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITE 211
ED + TG G LA L + ++LS ++ + + ++ RD + N + + +IT
Sbjct: 157 EDDYTVTGSGMQLAYGHLEQAYEDDLSNDEATTIAARSIKSAAERDTGSGNGVFLCEITG 216
Query: 212 EGTTI 216
EG I
Sbjct: 217 EGVDI 221
>gi|148362159|gb|ABQ59681.1| PSMB10a [Salmo salar]
gi|209733814|gb|ACI67776.1| Proteasome subunit beta type-7 precursor [Salmo salar]
Length = 277
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ L K+G+++ AD + G + K +I I + +G +D
Sbjct: 35 KTLKPMKTGTTIAGLVCKEGVVLGADTRATSGEVVADKMCAKIHYISPNIYCCGAGTAAD 94
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
++ L + +M N P+ + + L +++ R + + SL+LGGV
Sbjct: 95 TEKTTDLLSSNLTIFSMNSGRN---PRVVMAVNILQDMLFRYRGQ---IGASLILGGVDC 148
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G ++A G G+ A IL D + N+ E+ +L+ + +
Sbjct: 149 TGNHLYTVGPYGSIDNVQYLAMGSGDLAALGILEDRFKPNMEMEEAKELVRDAIHSGIMS 208
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +PY
Sbjct: 209 DLGSGNNIDICVITKQGVDYIRPY 232
>gi|56541012|gb|AAH87457.1| Unknown (protein for MGC:99279) [Xenopus laevis]
Length = 205
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G +++A+K KD + +AAD + + ++I P+G +G +G +D Q + + L
Sbjct: 8 GGAIMAMKGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRL 67
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV--KNGQKYLGM 143
L LY+ +G + PK S + ++Y RR F P + V+ G+ K Q ++
Sbjct: 68 KFRLNLYE--LKEGRQIKPKTFMSMVANLLYERR--FGPYYIEPVIAGLDPKTFQPFICS 123
Query: 144 VSMIGVNFE-DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ +IG E + V +G + + W ++ ED + + + M L DR AV+
Sbjct: 124 LDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAM--LNAVDRDAVS 181
Query: 203 KLQIA 207
+ +
Sbjct: 182 GMGVV 186
>gi|146147387|gb|ABQ01990.1| proteasome subunit beta type 10 [Salmo salar]
Length = 277
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ L K+G+++ AD + G + K +I I + +G +D
Sbjct: 35 KTLKPMKTGTTIAGLVCKEGVVLGADTRATSGEVVADKMCAKIHYISPNIYCCGAGTAAD 94
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
++ L + +M N P+ + + L +++ R + + SL+LGGV
Sbjct: 95 TEKTTDLLSSNLTIFSMNSGRN---PRVVMAVNILQDMLFRYRGQ---IGASLILGGVDC 148
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G ++A G G+ A IL D + N+ E+ +L+ + +
Sbjct: 149 TGNHLYTVGPYGSIDNVQYLAMGSGDLAALGILEDRFKPNMEMEEAKELVRDAIHSGIMS 208
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +PY
Sbjct: 209 DLGSGNNIDICVITKQGVDYIRPY 232
>gi|17541700|ref|NP_500125.1| Protein PBS-1 [Caenorhabditis elegans]
gi|351064427|emb|CCD72799.1| Protein PBS-1 [Caenorhabditis elegans]
Length = 239
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 100/220 (45%), Gaps = 25/220 (11%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR- 84
TGT+++A++Y G+++ D S GS I ++ +I PI + ++ SG +D Q +
Sbjct: 22 TGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADI 81
Query: 85 ---NLDELILYDNMWDDGNSLGPKELH---SYLTRVMYNRRNKFDPLWNSLVLGGVKN-- 136
++D + +N P ++ + +YN R + L S+++ G
Sbjct: 82 AKYHIDVYTMTENK--------PVTIYRSSQIFRQFLYNYREQ---LSASVLVAGWDEEL 130
Query: 137 -GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLY 195
GQ Y + + G A+G G+ + L +W NL+ E+ ++++ + + +
Sbjct: 131 GGQVY--AIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPNLTLEECKAIVKQAVGLATF 188
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPT 235
RD S+ +++A I + G+ K GF Q PT
Sbjct: 189 RDGSSGGVVRLAVINKAGSQFELFRPDKP--GFPFVQTPT 226
>gi|194756194|ref|XP_001960364.1| GF13326 [Drosophila ananassae]
gi|190621662|gb|EDV37186.1| GF13326 [Drosophila ananassae]
Length = 229
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 93/197 (47%), Gaps = 9/197 (4%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
T P TGT+++A+++ G+++ AD S G+ + + +++ I SG +D
Sbjct: 8 TDTPVSTGTTIMAVEFDGGVVIGADSRTSSGAYVANRVTDKLTRITDKIYCCRSGSAADT 67
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV---KN 136
Q + + + Y + ++L E S YN R D L +++ G +
Sbjct: 68 QAIADIVAYSLNYYENQTNKDAL-VHEAASEFRNFCYNYR---DSLLAGIIVAGYDEERG 123
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
GQ Y + + G+ ++ G G+ +R+ + +N+S E+ V ++K ++ +Y
Sbjct: 124 GQVY--SIPLGGMLTREACTIGGSGSSFIYGFVREHYRQNMSKEECVDFVKKAVQHAIYH 181
Query: 197 DRSAVNKLQIAKITEEG 213
D S+ ++I IT++G
Sbjct: 182 DGSSGGVVRIGIITKDG 198
>gi|296242983|ref|YP_003650470.1| proteasome endopeptidase complex subunit beta [Thermosphaera
aggregans DSM 11486]
gi|296095567|gb|ADG91518.1| proteasome endopeptidase complex, beta component [Thermosphaera
aggregans DSM 11486]
Length = 206
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 88/188 (46%), Gaps = 2/188 (1%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
T+ V L + +++AAD + G + +K V +I I ++ + SG ++D Q L+ N
Sbjct: 8 TTTVGLVAGEYVVLAADKRATAGPMVYHKRVRKIMEITPYAAMTISGLVADAQFLVEN-A 66
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
+ I D G + L S ++ ++ + +F P L+LGGV + L + +
Sbjct: 67 KYIAKDYELKMGKRISIDALASRISLIL-SAYLRFSPFIVQLLLGGVDHEGPKLYYMDLY 125
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G + ++TG G+ +A +L + E L+ E+ +L K + + RD + I
Sbjct: 126 GSVSRERFMSTGSGSPVAFGVLEQGYREGLTLEEAKELAFKAVSSAIMRDSFTGEGVDIV 185
Query: 208 KITEEGTT 215
I EG +
Sbjct: 186 VIGPEGIS 193
>gi|392870119|gb|EAS27280.2| proteasome component Pre1 [Coccidioides immitis RS]
Length = 205
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 77/172 (44%), Gaps = 21/172 (12%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD---FQELLRNLDELILY 92
KD L+AA G TI + ++ + + KH+L+ SGE D F E ++ +L
Sbjct: 10 KDFTLIAASKAAMRGPTILKSTDDKTRKLNKHTLIAYSGEAGDTVQFAEYIQANAQLYSM 69
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN-GQK-------YLGMV 144
N + S + L R + +R P +L+LGGV QK YL +
Sbjct: 70 RNETELSPSAVANFVRGELARSLRSR----SPYTVNLLLGGVDPITQKPSLYWLDYLASL 125
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+ + + A G+ + IL H ++SYE+G+KLLEKC L R
Sbjct: 126 AQV------PYAAHGYAQYYCLSILDKHHHPDISYEEGLKLLEKCTDELKRR 171
>gi|118576729|ref|YP_876472.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
gi|118195250|gb|ABK78168.1| 20S proteasome, alpha and beta subunit [Cenarchaeum symbiosum A]
Length = 195
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 88/183 (48%), Gaps = 7/183 (3%)
Query: 33 LKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
+K DG+++ ADM S G I + +I+ I H+ L +G ++D Q N+ +++ Y
Sbjct: 3 IKATDGVVLCADMRASAGYFIANNNTMKIQRIDDHAGLTLAGGVADAQ----NIVDVLRY 58
Query: 93 DNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVN 150
GP + S LT +++++ N+ P +++GG L + M G
Sbjct: 59 HASLHRIRKQGPIPIKSLARLTSLIFHQ-NRGYPFMADILMGGFDAVGPALYNIDMFGSV 117
Query: 151 FEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKIT 210
E S+V TG G+ +A L +E+ +L+ ++ + + ++ + R+ + + +A I
Sbjct: 118 EEKSYVTTGSGSPVAYGTLEEEYRADLTADEAKGVALRAVKAAITRNIGTGDGINVAVIN 177
Query: 211 EEG 213
G
Sbjct: 178 GNG 180
>gi|424811902|ref|ZP_18237142.1| proteasome endopeptidase complex, beta component [Candidatus
Nanosalinarum sp. J07AB56]
gi|339756124|gb|EGQ39707.1| proteasome endopeptidase complex, beta component [Candidatus
Nanosalinarum sp. J07AB56]
Length = 208
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 91/178 (51%), Gaps = 5/178 (2%)
Query: 37 DGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMW 96
+G+++AAD S G K+ ++I + + L +G + D Q+++R + + +
Sbjct: 21 EGVVLAADRRASLGRLASSKTAKKIFELDDNLGLTIAGSVGDAQKIVRTMRSQLKLQKL- 79
Query: 97 DDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE-DSH 155
+ L + L+ +++ NK+ P N +LGGV + L + G E + +
Sbjct: 80 -ETKELSVNAAGTLLSNILH--ANKYTPFMNQFILGGVGDDGGVLYSLGPAGSLMEHNQY 136
Query: 156 VATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEG 213
ATG G+ +A +L D + E L +++ +KL + ++ + RD ++ + + + +ITE+G
Sbjct: 137 TATGSGSQVAYGVLEDGYEEELDHQEAIKLATRTVQAAMERDTASGDGIMVTEITEDG 194
>gi|448630994|ref|ZP_21673449.1| proteasome subunit alpha [Haloarcula vallismortis ATCC 29715]
gi|445755368|gb|EMA06758.1| proteasome subunit alpha [Haloarcula vallismortis ATCC 29715]
Length = 244
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V ++ KDG+++AAD + I S+E+I I H + ++G ++D ++L+
Sbjct: 35 GTASVGVRTKDGVVIAADR-HARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVA 93
Query: 87 DELILYDNM-WDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
+ + +D+ S+ KE+ Y+ + Y + P +L++ G+++G+ L
Sbjct: 94 RRQSQVNRLRYDEPASVESLTKEITDYIQQ--YTQTGGARPFGVALLVAGIEDGEPRLFE 151
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCM 190
G +E VA G + L DE+ E + E G++L + +
Sbjct: 152 TDPSGTPYEWQAVAIGGSREDIQSFLEDEYAEEMDLEGGIELALRAL 198
>gi|448500211|ref|ZP_21611690.1| proteasome subunit alpha [Halorubrum coriense DSM 10284]
gi|445696933|gb|ELZ49012.1| proteasome subunit alpha [Halorubrum coriense DSM 10284]
Length = 260
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 86/187 (45%), Gaps = 6/187 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G V ++ DG++ A M S + +S+E++ + H ++G ++D ++L+ +L
Sbjct: 36 GAPSVGVRTTDGVVFVA-MSRPSSSLMEAESIEKLHKLDDHLGTASAGHVADARQLI-DL 93
Query: 87 DELILYDNMWDDGNSLGPKELHSYLT-RVMYN-RRNKFDPLWNSLVLGGVKNGQKYLGMV 144
N G +G + L ++T + N +R P +L++GG+ +G+ L
Sbjct: 94 ARRQSQGNRLRYGEPVGVETLTKFVTDHIQENTQRGGTRPYGAALLIGGIDDGEPRLFAA 153
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E G G + L DEW ++LS EDG++L + + D + L
Sbjct: 154 DPSGTPNEWKATVIGGGRQDIQGHLEDEWSDDLSLEDGIELAVAALAA--HDDEFEPSDL 211
Query: 205 QIAKITE 211
+A +TE
Sbjct: 212 AVATVTE 218
>gi|195043591|ref|XP_001991649.1| GH12772 [Drosophila grimshawi]
gi|193901407|gb|EDW00274.1| GH12772 [Drosophila grimshawi]
Length = 300
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 10/198 (5%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
R L TGTS+V + + DG+++ AD + G + K+ +I + +H +G +D
Sbjct: 36 RAPLAVRTGTSIVGIIFDDGVILGADTRATEGPIVSDKNCSKIHRLQEHIFCCGAGTAAD 95
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFD---PLWNSLVLGGVK 135
+ ++ L + D L + M RR F + +LV+GGV
Sbjct: 96 TE-------QMTLVTSAELDLQELNTNRQVPVICASMLLRRTLFRYQGHISAALVMGGVD 148
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLY 195
++ + G + + A G G A +L W L E G +L+ + + +
Sbjct: 149 KYGPHINCIHPCGSIDKIPYAAMGSGTLAAMSVLEHGWQPTLDLEQGKQLVREAITAGVL 208
Query: 196 RDRSAVNKLQIAKITEEG 213
D + + + + IT G
Sbjct: 209 NDLGSGSNIDLCVITRNG 226
>gi|47216875|emb|CAG11682.1| unnamed protein product [Tetraodon nigroviridis]
Length = 275
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 91/205 (44%), Gaps = 8/205 (3%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
+T P TGT++ + +KDG+++ AD + G + K +I I + +G +
Sbjct: 32 SQTPKPLKTGTTIAGVVFKDGVVLGADTRATSGEVVADKMCAKIHHIAPNIYCCGAGTAA 91
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHS--YLTRVMYNRRNKFDPLWNSLVLGGVK 135
D + + D L ++ + P+ + + +L ++Y + + +L+LGGV
Sbjct: 92 DTE---KTTDLLSSNMTIFSLNSGRKPRVVMAVNFLQDMLYRYHGQ---IGANLILGGVD 145
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLY 195
+L V G + ++A G G+ A IL D + + E+ +L+ + +
Sbjct: 146 CTGNHLYRVGPYGSVDKVPYLAMGSGDLAALGILEDGFKHGMEVEEAKRLVRLAIHAGIM 205
Query: 196 RDRSAVNKLQIAKITEEGTTISQPY 220
D + N + I I+ EG +PY
Sbjct: 206 SDLGSGNNIDICVISREGAEYIRPY 230
>gi|307095116|gb|ADN29864.1| proteasome beta 2 subunit [Triatoma matogrossensis]
Length = 277
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 92/203 (45%), Gaps = 6/203 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQ-ELLR 84
TGT++V + +KDG+++ AD + + + K+ +I + K+ +G +D + L
Sbjct: 38 TGTTIVGIIFKDGVILGADTRATEDTIVADKNCSKIHYLAKNMYCCGAGTAADTEMTTLT 97
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+L L+ + G + + + L ++++ + + +LVLGG+ N +L +
Sbjct: 98 IASQLELH--RLNTGRVVPVRTANRMLKQLLFRYQGY---IGAALVLGGIDNDGPHLYTI 152
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + + G G+ A +L +WH ++ E+ +L+ + ++ D + +
Sbjct: 153 HPHGSTDNPPYTSMGSGSLAAMSVLESQWHPDMEEEEAKQLVRNAIIAGIFNDLGSGSSC 212
Query: 205 QIAKITEEGTTISQPYALKTFWG 227
I I + +PY + G
Sbjct: 213 DICIIKKNAVEYIRPYDVANIKG 235
>gi|17508495|ref|NP_493271.1| Protein PBS-2 [Caenorhabditis elegans]
gi|3874965|emb|CAB16855.1| Protein PBS-2 [Caenorhabditis elegans]
Length = 277
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 91/202 (45%), Gaps = 20/202 (9%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++VA+ +K G++M AD + G+ I K E++ + + +G +D ++ +
Sbjct: 45 TGTTIVAVAFKGGLVMGADSRATAGNIIADKHCEKVHKLTESIYACGAGTAADLDQVTKM 104
Query: 86 LDELILYDNMWDDGNSLGPKELHS-YLTRVMYNRRNKFDPLWN-------SLVLGGVKNG 137
L GN L EL++ RV+ R L+N L++GGV
Sbjct: 105 L-----------SGN-LRLLELNTGRKARVITALRQAKQHLFNYQGYIGAYLLIGGVDPT 152
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+L M S G A G G++ A IL ++ +++ ++ KL+++ + ++ D
Sbjct: 153 GPHLYMCSANGTTMAFPFTAQGSGSYAAITILERDFKVDMTKDEAEKLVQRALEAGMHGD 212
Query: 198 RSAVNKLQIAKITEEGTTISQP 219
++ N L + I T P
Sbjct: 213 NASGNSLNLVIIEPSETVFKGP 234
>gi|407917385|gb|EKG10694.1| Peptidase T1A proteasome beta-subunit [Macrophomina phaseolina MS6]
Length = 274
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 6/196 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + G+++AAD + G + K+ E++ I +G +D +
Sbjct: 28 TGTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHYIAPQIWCAGAGTAADTE----- 82
Query: 86 LDELILYDNMWDDGNSLGPK-ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
++ N+ S G K + + +T + + + LV+ GV +L V
Sbjct: 83 FTTALMSSNLELHALSTGRKPRVVTCMTMLKQHLFRYQGHIGAYLVVAGVDPTGAHLFTV 142
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + +V G G+ A + +W L+ +D VKL + ++ D + + +
Sbjct: 143 HAHGSTDKLPYVTMGSGSLAAMSVFETQWKPTLTRDDAVKLCSDAILAGIFNDLGSGSNV 202
Query: 205 QIAKITEEGTTISQPY 220
+A ITEE TT+ + Y
Sbjct: 203 DVAVITEEKTTLMRNY 218
>gi|118789882|ref|XP_317882.3| AGAP011423-PA [Anopheles gambiae str. PEST]
gi|116122785|gb|EAA13087.3| AGAP011423-PA [Anopheles gambiae str. PEST]
Length = 279
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 88/195 (45%), Gaps = 4/195 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++ + YKDG+++ AD + G + K+ E+I + K+ +G +D E+
Sbjct: 38 TGTTICGIIYKDGVILGADTRATEGPIVADKNCEKIHYLAKNMYCCGAGTAAD-TEMTTQ 96
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G ++ ++ L + ++ + +LVLGGV Y+ +
Sbjct: 97 MIASNLELHRLNTGRTVPVVVANTMLKQFLFRYQGYVSA---ALVLGGVDTTGSYIYCIY 153
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G + + G G+ A + W ++S E+G KL+ + ++ D + + +
Sbjct: 154 PHGSTDKLPYATMGSGSLAAMSVFESRWKPDMSEEEGKKLVRDAIAAGVFNDLGSGSNID 213
Query: 206 IAKITEEGTTISQPY 220
+ I ++ T + Y
Sbjct: 214 LCVIRKDATEYLRTY 228
>gi|126458649|ref|YP_001054927.1| proteasome endopeptidase complex protein [Pyrobaculum calidifontis
JCM 11548]
gi|302595741|sp|A3MS44.1|PSB1_PYRCJ RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|126248370|gb|ABO07461.1| proteasome endopeptidase complex, beta component, Threonine
peptidase, MEROPS family T01A [Pyrobaculum calidifontis
JCM 11548]
Length = 201
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 91/184 (49%), Gaps = 2/184 (1%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
T+ V + KDG+++A D + G I +K+ E+I I H SG ++D Q +L L
Sbjct: 2 TTTVGIVAKDGVVLATDKRVTAGYYIAHKAGEKIWKIDDHVAATMSGGVADLQSVLSFL- 60
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
L + + + + L +Y++ +++ R + L +S+V G L MV +
Sbjct: 61 SLRAREYRVEHKRPIPIRALVNYVSLLLFYSR-PYIYLVHSIVGGVDAEEGPVLYMVDWL 119
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G ++ ++ATG G+ A+ L + E+L+ ++ V+L + ++ + D + + +
Sbjct: 120 GTVTKEKYIATGSGSPYAKGALEVAYREDLTIDEAVELAIRAVKAAIRNDPGSGEGIDVV 179
Query: 208 KITE 211
IT+
Sbjct: 180 TITK 183
>gi|384250069|gb|EIE23549.1| N-terminal nucleophile aminohydrolase [Coccomyxa subellipsoidea
C-169]
Length = 269
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 93/199 (46%), Gaps = 26/199 (13%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++ L +KDG+++ AD + +T+ K+ E+I I + +G +D + N
Sbjct: 30 TGTTIAGLIFKDGVVLGADTRSTSDTTVADKNCEKIHYIAPNIYCCGAGTAADTE----N 85
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLT----RVMYNRRNKFDPLWN-------SLVLGGV 134
+ +I +SL ELH Y T RV+ L+ +LVLGGV
Sbjct: 86 VTGMI--------SSSL---ELHRYATGRGSRVITALTMLKTHLFKYQGHVSAALVLGGV 134
Query: 135 KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLL 194
+L V G + G G+ A + D + E+L+ E+G++L+ + +R +
Sbjct: 135 DFNGPHLFTVYPHGSTDSLPYCTMGSGSLNAMAVFEDGYKEDLTKEEGMELVARAIRSGI 194
Query: 195 YRDRSAVNKLQIAKITEEG 213
+ D + + + + IT++G
Sbjct: 195 FNDLGSGSNVDLCIITKDG 213
>gi|353236289|emb|CCA68287.1| probable 20S proteasome beta2 subunit [Piriformospora indica DSM
11827]
Length = 273
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 10/198 (5%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V +KDG+++ AD + G + K+ E+I I ++ +G +D +
Sbjct: 34 TGTTIVGCLFKDGVVLGADTRATNGPIVADKNCEKIHYIAQNIRCCGAGTAADTE----- 88
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWN---SLVLGGVKNGQKYLG 142
++ N+ + ++L + +T + ++ F N +LVLGGV L
Sbjct: 89 FTTALISSNI--ELHALSTGRIPRVVTAMTMLKQMLFRYQGNIGAALVLGGVDETGPNLF 146
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
V+ G + +V G G+ A I EW L + V L+ K ++ ++ D + +
Sbjct: 147 TVAPHGSTDKLPYVTMGSGSLAAMSIFETEWQAGLDRDAAVALVSKAIQAGIFNDLGSGS 206
Query: 203 KLQIAKITEEGTTISQPY 220
+ + IT++ T + + Y
Sbjct: 207 NVDVCIITKDRTDMLRNY 224
>gi|448410344|ref|ZP_21575138.1| proteasome subunit alpha [Halosimplex carlsbadense 2-9-1]
gi|445671816|gb|ELZ24399.1| proteasome subunit alpha [Halosimplex carlsbadense 2-9-1]
Length = 243
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 87/187 (46%), Gaps = 16/187 (8%)
Query: 36 KDGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELIL 91
+DG+++A DM GG + S R + VE+I P +L+G+ G F LR E+ L
Sbjct: 57 EDGVIVATDMRASLGGRFVSNKRVQKVEQIHPTAALTLVGSVGGAQSFIRSLRA--EVDL 114
Query: 92 YDNMWDDGNSLGPKELHSYLTRVMYN--RRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGV 149
Y+ + S+ + L+ + N R F + +LGG+ + ++ + G
Sbjct: 115 YEARKGEDMSM------TALSTLAGNFARGGPF--FAINPILGGIDDEGSHVYSIDPAGG 166
Query: 150 NFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKI 209
ED + TG G +A L D + + +S ++ +R RD + N + IA++
Sbjct: 167 VMEDDYTVTGSGLTVAYGTLEDRYEDGMSMDEARSAAVAGVRAAAERDTGSGNGVYIAEV 226
Query: 210 TEEGTTI 216
T+EG I
Sbjct: 227 TDEGVDI 233
>gi|154345087|ref|XP_001568485.1| putative proteasome beta 2 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065822|emb|CAM43599.1| putative proteasome beta 2 subunit [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 254
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 89/191 (46%), Gaps = 4/191 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + Y+DG+++ AD + GS + K +I + + + +G +D E + N
Sbjct: 28 TGTTIVGVVYQDGVVLGADTRATEGSIVADKHCRKIHYMAPNIMCCGAGTSAD-TEAVTN 86
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G E + L R +Y + + +LVLGGV +L ++
Sbjct: 87 MVSSHLALHRLETGKQSRVLEALTLLKRHLYRYQGH---VSAALVLGGVDVEGPFLATIA 143
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G V G G+ A + + +N++ E+ +L+ +R ++ D + ++
Sbjct: 144 PHGSTDRLPFVTMGSGSIAAMAQMETAYKDNMTCEEAKELVASAIRKGIFNDPYSGTQVD 203
Query: 206 IAKITEEGTTI 216
+ IT++ T +
Sbjct: 204 VCVITKDKTEV 214
>gi|257053724|ref|YP_003131557.1| proteasome subunit alpha [Halorhabdus utahensis DSM 12940]
gi|256692487|gb|ACV12824.1| Proteasome endopeptidase complex [Halorhabdus utahensis DSM 12940]
Length = 245
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL--- 83
G++ V ++ +G+++AAD + S I S+E+ I H + ++G ++D ++L+
Sbjct: 36 GSASVGVRTDEGVVLAADRQ-TRSSLIERDSIEKTHKIDDHIAIASAGHVADARKLIDFA 94
Query: 84 --RNLDELILYDNMWDDGNSLGPKELHSYLTRVM--YNRRNKFDPLWNSLVLGGVKNGQK 139
R E + YD +G + L +T + Y + P SL++GG++NG+
Sbjct: 95 RRRAQVERLRYDQ------PMGVEALTKAITDTIQEYTQTGGARPFGVSLIVGGMENGEP 148
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKL 185
L G +E S +A G G + D + + ++ E GV L
Sbjct: 149 RLFETDPSGTPYEWSALAVGGGREEIQEYFEDNYEDGMTLEQGVGL 194
>gi|159113877|ref|XP_001707164.1| Proteasome subunit beta type 9 precursor [Giardia lamblia ATCC
50803]
gi|157435267|gb|EDO79490.1| Proteasome subunit beta type 9 precursor [Giardia lamblia ATCC
50803]
Length = 221
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/202 (19%), Positives = 95/202 (47%), Gaps = 3/202 (1%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N + + P GT+++ +KY +G+L++AD + G+ + + + ++ PI +
Sbjct: 12 NPTLTHSMPPLSLGTTIIVMKYSNGVLLSADTRATMGNLVVDRFIPKVLPITDKIYTCIA 71
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF-DPLWNSLVLG 132
G +S Q L+ + ++ M N G + + ++ +K+ + L + +LG
Sbjct: 72 GSVSHAQFLVNEVRAHLMTQQMDLHANLNGMDPMVATAANIISIYLHKYREFLHAAFILG 131
Query: 133 GVKNGQKYLGMVSMIGVN-FEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMR 191
GV N + + SMIG + E+ + +G G + ++++ + L+ + + L K ++
Sbjct: 132 GVDN-TGFHCINSMIGGSVLEEDYAISGSGGVFIKGLMKELYRPELTRTEAINLAHKLLK 190
Query: 192 VLLYRDRSAVNKLQIAKITEEG 213
+ D + ++ + ++G
Sbjct: 191 TAISLDTKSGGFMRFVAVEQDG 212
>gi|256070137|ref|XP_002571402.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
gi|350646868|emb|CCD58589.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
Length = 194
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 87/178 (48%), Gaps = 14/178 (7%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVE--RIKPIGKHSLLGASGEISDFQELLR 84
G++V+A+ KD +A D+ +G ++ S + ++ P+G +G G +D Q + +
Sbjct: 8 GSAVIAMSGKDCAAIACDL--RFGVNLQTISTDFTKVYPLGPRLYVGFPGLATDNQTVFQ 65
Query: 85 NLDELILYDNMWD--DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN--GQKY 140
L NM++ + ++ P+ + + L+ ++Y RR F P + V+ G+ + + Y
Sbjct: 66 RLQ---FRKNMYELRENKTIKPQTITTMLSNLLYERR--FGPYFVEPVIAGIDHTTNKPY 120
Query: 141 LGMVSMIGVNFE-DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+ + +IG E + V +G + W EN++ ++ + + +C+ L RD
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMNSKELFECISQCILNALNRD 178
>gi|256070135|ref|XP_002571401.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
gi|350646867|emb|CCD58588.1| proteasome subunit beta 3 (T01 family) [Schistosoma mansoni]
Length = 205
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/198 (21%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVE--RIKPIGKHSLLGASGEISDFQELLR 84
G++V+A+ KD +A D+ +G ++ S + ++ P+G +G G +D Q + +
Sbjct: 8 GSAVIAMSGKDCAAIACDL--RFGVNLQTISTDFTKVYPLGPRLYVGFPGLATDNQTVFQ 65
Query: 85 NLDELILYDNMWD--DGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN--GQKY 140
L NM++ + ++ P+ + + L+ ++Y RR F P + V+ G+ + + Y
Sbjct: 66 RLQ---FRKNMYELRENKTIKPQTITTMLSNLLYERR--FGPYFVEPVIAGIDHTTNKPY 120
Query: 141 LGMVSMIGVNFE-DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
+ + +IG E + V +G + W EN++ ++ + + +C+ L RD
Sbjct: 121 VACMDLIGCVCEANDFVVSGTCTEQMYGMCETLWEENMNSKELFECISQCILNALNRDAV 180
Query: 200 AVNKLQIAKITEEGTTIS 217
+ ++ + ++ TIS
Sbjct: 181 SGWGARVYLLEKDAVTIS 198
>gi|392883970|gb|AFM90817.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G +++A+K K+ + +A+D + + ++I P+G+ +G +G +D Q + + L
Sbjct: 8 GAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDVQTVSQRL 67
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV--KNGQKYLGM 143
L LY+ +G + PK S ++ ++Y RR F P + V+ G+ K + ++
Sbjct: 68 KFRLNLYE--LKEGRQIKPKTFMSMVSNLLYERR--FGPYYVDPVIAGLHPKTFEPFICS 123
Query: 144 VSMIGVNFE-DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ +IG E D V +G + + W +L ED + + + M L DR A++
Sbjct: 124 LDVIGCPMETDDFVVSGTCSEQMYGMCESLWEPDLESEDLFETISQAM--LNAVDRDAIS 181
>gi|225192939|dbj|BAH29704.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 8/209 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E KL++ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDGFQHDLELEKAKKLVQDAVHSGIMN 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTF 225
D + N + I IT EG +P+ F
Sbjct: 198 DLGSGNNIDICVITAEGVDYIRPFQESEF 226
>gi|453082164|gb|EMF10212.1| N-terminal nucleophile aminohydrolase [Mycosphaerella populorum
SO2202]
Length = 203
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 9/166 (5%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD---FQELLRNLDELILY 92
KD +MAA G+TI S ++ + + KH+L+ GE D F + ++ L
Sbjct: 10 KDFTIMAASKAAMRGATILKASDDKTRALNKHTLMAFVGEAGDTIQFADYVQANTALYGI 69
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMVSMIGVN 150
N GN L P E S++ + P +L+LGG + + L + +
Sbjct: 70 RN----GNELTPNETASFVRSELAKSLRSRSPYTVNLLLGGYDTHHNKPTLHWIDYLASC 125
Query: 151 FEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+ A G+ + IL H ++SYE G+K+L C L R
Sbjct: 126 APLPYAAHGYAQYYCLAILDKHHHPDISYEQGMKILRMCTDELKRR 171
>gi|448671266|ref|ZP_21687205.1| proteasome subunit alpha [Haloarcula amylolytica JCM 13557]
gi|445765869|gb|EMA17006.1| proteasome subunit alpha [Haloarcula amylolytica JCM 13557]
Length = 244
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V ++ +DG+++AAD + I S+E+I I H + ++G ++D ++L+
Sbjct: 35 GTASVGVRTEDGVVIAADR-HARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVA 93
Query: 87 DELILYDNM-WDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
+ + +D+ S+ KE+ Y+ + Y + P +L++ G+++G+ L
Sbjct: 94 RRQAQVNRLRYDEPASVESLTKEITDYIQQ--YTQTGGARPFGVALLVAGIEDGEPRLFE 151
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCM 190
G +E VA G + L DE+ E + E G++L + +
Sbjct: 152 TDPSGTPYEWQAVAIGGSREDIQTFLEDEYAEEMDLEAGIELALRAL 198
>gi|448339242|ref|ZP_21528272.1| proteasome endopeptidase complex, beta subunit [Natrinema pallidum
DSM 3751]
gi|445620748|gb|ELY74237.1| proteasome endopeptidase complex, beta subunit [Natrinema pallidum
DSM 3751]
Length = 243
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P +L+G+ G F LR E+ LY
Sbjct: 58 DGVIIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ G + L + + R F + +LGGV + ++ + G E
Sbjct: 116 EARR--GERMSIDALATLAGN--FARGGPFFAIHP--ILGGVDDEGSHVYSIDPAGGVME 169
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA L + ++S E+ + + ++ + RD + N + +A+IT+E
Sbjct: 170 DDYTVTGSGMQLAYGHLEQAYEPDMSNEEAKTVAARGIKSAVERDTGSGNGVFLAEITDE 229
Query: 213 GTTI 216
G I
Sbjct: 230 GVDI 233
>gi|335437988|ref|ZP_08560745.1| proteasome subunit alpha [Halorhabdus tiamatea SARL4B]
gi|334893592|gb|EGM31803.1| proteasome subunit alpha [Halorhabdus tiamatea SARL4B]
Length = 245
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 80/166 (48%), Gaps = 14/166 (8%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL--- 83
G++ V ++ +G+++AAD + S I S+E+ I H + ++G ++D ++L+
Sbjct: 36 GSASVGVRTDEGVVLAADRQ-TRSSLIERDSIEKTHKIDDHIAIASAGHVADARKLIDFA 94
Query: 84 --RNLDELILYDNMWDDGNSLGPKELHSYLTRVM--YNRRNKFDPLWNSLVLGGVKNGQK 139
R+ E + YD +G + L +T + Y + P +L++GG++NG+
Sbjct: 95 RRRSQVERLRYDQ------PMGVEALTKSITDTIQEYTQTGGARPFGVALIVGGMENGEP 148
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKL 185
L G +E S +A G G + D + + ++ E GV L
Sbjct: 149 RLFETDPSGTPYEWSALAVGGGREEIQEYFEDNYEDGMTLEQGVGL 194
>gi|308162461|gb|EFO64857.1| Proteasome subunit beta type 9 precursor [Giardia lamblia P15]
Length = 221
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/213 (21%), Positives = 99/213 (46%), Gaps = 12/213 (5%)
Query: 13 PNDPIQRTQL----PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHS 68
P P+ T + P GT+++ +KY +G+L++AD + G+ + + + ++ PI
Sbjct: 7 PYTPVNPTLMHSMPPLSLGTTIIVMKYSNGVLLSADTRATMGNLVVDRFIPKVLPITDKI 66
Query: 69 LLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF-DPLWN 127
+G +S Q L+ + ++ M N G + + ++ +K+ + L
Sbjct: 67 YTCIAGSVSHAQFLVNEVRAHLMTQQMDLHANLNGMDPMVATAANIISIYLHKYREFLHA 126
Query: 128 SLVLGGVKNGQKYLGMVSMIGVN-FEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLL 186
+ +LGGV N + + SMIG + E+ + +G G + ++++ ++ L+ + + L
Sbjct: 127 AFILGGVDN-TGFHCINSMIGGSVLEEDYSISGSGGVFIKGLMKELYNPELTRAEAINLA 185
Query: 187 EKCMRVLLYRDRSAVNKLQIAKI-----TEEGT 214
K ++ + D + ++ I EEGT
Sbjct: 186 HKLLKTAISLDTKSGGFMRFVAIEQGGLAEEGT 218
>gi|397775022|ref|YP_006542568.1| proteasome endopeptidase complex, beta subunit [Natrinema sp. J7-2]
gi|448343846|ref|ZP_21532763.1| proteasome endopeptidase complex, beta subunit [Natrinema gari JCM
14663]
gi|397684115|gb|AFO58492.1| proteasome endopeptidase complex, beta subunit [Natrinema sp. J7-2]
gi|445621929|gb|ELY75394.1| proteasome endopeptidase complex, beta subunit [Natrinema gari JCM
14663]
Length = 243
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P +L+G+ G F LR E+ LY
Sbjct: 58 DGVIIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ G + L + + R F + +LGGV + ++ + G E
Sbjct: 116 EARR--GERMNIDALATLAGN--FARGGPFFAIHP--ILGGVDDEGSHVYSIDPAGGVME 169
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA L + ++S E+ + + ++ + RD + N + +A+IT+E
Sbjct: 170 DDYTVTGSGMQLAYGHLEQAYEPDMSNEEAKTVAARGIKSAVERDTGSGNGVFLAEITDE 229
Query: 213 GTTI 216
G I
Sbjct: 230 GVDI 233
>gi|296420572|ref|XP_002839843.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636049|emb|CAZ84034.1| unnamed protein product [Tuber melanosporum]
Length = 175
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 75/172 (43%), Gaps = 3/172 (1%)
Query: 50 GSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGN-SLGPKELH 108
G TI ++ + + H+L+ SGE D + + + M ++ L P +
Sbjct: 3 GVTILKAEDDKTRTLNPHTLMAFSGEAGDTVQFAEYIQANVQLYGMRNNSKWQLSPSAVA 62
Query: 109 SYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLAR 166
S++ R + +P + +L++GG G+ +L + + + + A G+ +
Sbjct: 63 SFVRRQLAKSLRSRNPYYVNLLIGGFDCTTGKPHLYWLDYLASSAAVPYAAHGYAQYYCL 122
Query: 167 PILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTISQ 218
IL H +++ E+G+KL+ C L+ R L + +TE G + Q
Sbjct: 123 SILDKHHHPDITLEEGIKLMRMCHDELIKRLPIDFKGLTVKAVTENGVEVVQ 174
>gi|126132438|ref|XP_001382744.1| hypothetical protein PICST_55763 [Scheffersomyces stipitis CBS
6054]
gi|126094569|gb|ABN64715.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 194
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/169 (21%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDEL 89
++ ++ DG ++A + G +I + ++ + + KH+L+ +GE D + +
Sbjct: 4 ILGIRVADGTIIATSKAATRGISILKDTDDKTRVLNKHNLVAYTGESGDTVQFAEYVQAN 63
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMVSMI 147
I +M ++ L PK S++ + P ++++GG K+ L + +
Sbjct: 64 IQLYSMRENDIELSPKATASFVRNQLATSIRSRKPYQVNVLIGGYDTKSNTPSLNWIDYL 123
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
G E + A G+ A +L + +N+ E G+ LL+ C++ L R
Sbjct: 124 GTQVELPYGAHGYAAFYANSLLDKHYKKNMDVEQGLALLKMCLKELETR 172
>gi|401827105|ref|XP_003887645.1| proteasome subunit beta type-1 [Encephalitozoon hellem ATCC 50504]
gi|392998651|gb|AFM98664.1| proteasome subunit beta type-1 [Encephalitozoon hellem ATCC 50504]
Length = 290
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 91/203 (44%), Gaps = 24/203 (11%)
Query: 23 PYVTGT-SVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQE 81
PY + +VV LK D ++++ D S I + + +I IG L G +G +D E
Sbjct: 85 PYEDNSGTVVCLKQDDFVVVSGDTRHSSEMVINSREMSKIFRIGNFFLTG-TGFYADSHE 143
Query: 82 LLRNLD-ELILYDNMWDDGNSLGPKELHS---YLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
+ ++ E+ Y+ GP +HS L++++Y+RR F P ++ L G NG
Sbjct: 144 VYVKMEYEIRQYE-------VDGPINIHSAANLLSKILYSRR--FFPYYSYCTLSGFDNG 194
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPIL-----RDEWHE----NLSYEDGVKLLEK 188
+ Y+ +G + G G + +P+L + WH LS ED V+L+ K
Sbjct: 195 KPYIYAYDPVGSFESVTCECNGSGRSMIQPLLDSFIDKKNWHNAEQTQLSQEDCVRLIAK 254
Query: 189 CMRVLLYRDRSAVNKLQIAKITE 211
RD + L+I + E
Sbjct: 255 AFASAAERDIKTKDNLEIYVLRE 277
>gi|303391190|ref|XP_003073825.1| proteasome subunit beta type-6 [Encephalitozoon intestinalis ATCC
50506]
gi|303302973|gb|ADM12465.1| proteasome subunit beta type-6 [Encephalitozoon intestinalis ATCC
50506]
Length = 202
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 88/192 (45%), Gaps = 10/192 (5%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
+TGT+++A+KY DG+L+ AD S G+ I + +++ PI + + SG +D Q +
Sbjct: 7 MTGTTIIAIKYDDGVLIGADSRTSMGAYIPSRVTDKLTPITNNIFVCRSGSSADTQMISE 66
Query: 85 NLDELILYDNMWDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
L +Y ++ S P + + ++++Y + L L++ G + +
Sbjct: 67 YLK---MYLTLYSHLESSIPLVQRAATLASKIIYENPS----LLAGLIVAGYDDKPRIFN 119
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+S+ G E G G+ W +S E+G+ ++ + + RD ++
Sbjct: 120 -ISLGGTLVECDWAIGGSGSAFIYGYCDVNWKNGMSLEEGIGFIKNAVSCAINRDNASGG 178
Query: 203 KLQIAKITEEGT 214
++++ I+ G
Sbjct: 179 CIRMSAISRNGV 190
>gi|448310400|ref|ZP_21500237.1| proteasome endopeptidase complex subunit beta [Natronolimnobius
innermongolicus JCM 12255]
gi|445608098|gb|ELY61964.1| proteasome endopeptidase complex subunit beta [Natronolimnobius
innermongolicus JCM 12255]
Length = 243
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISSLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ +G S+ L + N +LGGV + ++ + G +
Sbjct: 116 EARRGEGMSI------DALATLAGNFARGGPFFAIHPILGGVDDEGSHVYSIDPAGGVMK 169
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA L + + LS E+ + + ++ RD + N + + +IT E
Sbjct: 170 DDYTVTGSGMQLAYGHLEQAYEDGLSNEEAKTIAARSIKSAAERDTGSGNGVFLCEITGE 229
Query: 213 GTTI 216
G I
Sbjct: 230 GVDI 233
>gi|344212557|ref|YP_004796877.1| proteasome subunit alpha [Haloarcula hispanica ATCC 33960]
gi|448652123|ref|ZP_21681136.1| proteasome subunit alpha [Haloarcula californiae ATCC 33799]
gi|343783912|gb|AEM57889.1| proteasome subunit alpha [Haloarcula hispanica ATCC 33960]
gi|445769526|gb|EMA20600.1| proteasome subunit alpha [Haloarcula californiae ATCC 33799]
Length = 244
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V ++ +DG+++AAD + I S+E+I I H + ++G ++D ++L+
Sbjct: 35 GTASVGVRTEDGVVIAADR-HARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVA 93
Query: 87 DELILYDNM-WDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
+ + +D+ S+ KE+ Y+ + Y + P +L++ G+++G+ L
Sbjct: 94 RRQAQVNRLRYDEPASVESLTKEITDYIQQ--YTQTGGARPFGVALLVAGIEDGEPRLFE 151
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCM 190
G +E VA G + L DE+ E + E G++L + +
Sbjct: 152 TDPSGTPYEWQAVAIGGSREDIQTFLEDEYAEEMDLEAGIELALRAL 198
>gi|392877590|gb|AFM87627.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 87/180 (48%), Gaps = 10/180 (5%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G +++A+K K+ + +A+D + + ++I P+G+ +G +G +D Q + + L
Sbjct: 8 GAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDVQTVSQRL 67
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV--KNGQKYLGM 143
L LY+ +G + PK S ++ ++Y RR F P + V+ G+ K + ++
Sbjct: 68 KFRLNLYE--LKEGRQIKPKTFMSMVSNLLYERR--FGPYYVDPVIAGLHPKTFEPFICS 123
Query: 144 VSMIGVNFE-DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ +IG E D V +G + + W +L ED + + + M L DR A++
Sbjct: 124 LDVIGCPMETDDFVVSGTCSEQMYGMCESLWEPDLESEDLFEPISQAM--LNAVDRDAIS 181
>gi|221055227|ref|XP_002258752.1| 20S proteasome beta subunit [Plasmodium knowlesi strain H]
gi|193808822|emb|CAQ39524.1| 20S proteasome beta subunit, putative [Plasmodium knowlesi strain
H]
Length = 270
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ +A K+KDGI++A D S GS I ++VE+I I K+ L +G +D + L
Sbjct: 59 GTTTLAFKFKDGIIVAVDSRASMGSFISSQNVEKIIEINKNILGTMAGGAADCLYWEKYL 118
Query: 87 DELI-LYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
++I +Y+ + + + + L+ ++Y + L ++L G + + +
Sbjct: 119 GKIIKIYE--LRNNEKISVRAASTILSNILYQYKGY--GLCCGIILSGYDHTGFNMFYID 174
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G E + + G G+ A IL + NLS E V+L + +RD + K++
Sbjct: 175 DEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLSLEQAVELARNAIYHATFRDGGSGGKVR 234
Query: 206 IAKITEEG 213
+ I + G
Sbjct: 235 VFYIHKNG 242
>gi|336369146|gb|EGN97488.1| hypothetical protein SERLA73DRAFT_184212 [Serpula lacrymans var.
lacrymans S7.3]
gi|336381936|gb|EGO23087.1| hypothetical protein SERLADRAFT_471789 [Serpula lacrymans var.
lacrymans S7.9]
Length = 274
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 92/209 (44%), Gaps = 16/209 (7%)
Query: 14 NDPIQRTQLPY----VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSL 69
ND + LP TGT++V +KDGI++ AD + G + K+ E+I I +
Sbjct: 20 NDFLAEKGLPVPKATSTGTTIVGCLFKDGIVLGADTRATGGPIVMDKNCEKIHYITESIR 79
Query: 70 LGASGEISDFQELLRNLDELILYDNMWDDGNSLG--PKELH--SYLTRVMYNRRNKFDPL 125
+G +D + ++ NM G S G PK + + L ++++ + + +
Sbjct: 80 CCGAGTAADTE-----FTTALISSNMELHGLSTGRKPKVVTAMTMLKQMLFRYQGQ---I 131
Query: 126 WNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKL 185
+LVLGGV +L + G + +V G G+ A + W ++ ED +KL
Sbjct: 132 GAALVLGGVDATGPHLFTIHPHGSTDKLPYVTMGSGSLAAMAVFESGWKPDMEREDALKL 191
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEGT 214
+ + ++ D + + + IT T
Sbjct: 192 VTAAISAGIFNDLGSGSNVDACVITASHT 220
>gi|297527490|ref|YP_003669514.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
gi|297256406|gb|ADI32615.1| Proteasome endopeptidase complex [Staphylothermus hellenicus DSM
12710]
Length = 210
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 2/173 (1%)
Query: 25 VTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
V+ T+ V + D +++AAD + GS + +K V++I I + + SG ++D E++
Sbjct: 9 VSKTTTVGIVVGDYVVLAADKRATAGSLVAHKRVKKIIRIDDYIAMTISGLVAD-AEIIA 67
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
I + G + L S L+ ++ N + P L+LGG N +L +
Sbjct: 68 EQARFIARKYKLELGRPIKVSGLASNLS-IILNTYLRASPYIVQLLLGGYDNNGPHLFYM 126
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+ G E+ ++ATG G+ A +L + + +LS E+ +L K + RD
Sbjct: 127 DLYGSLSEEKYMATGSGSPTAFGVLEEGYRSDLSLEEAKELAFKAVSAATRRD 179
>gi|348541145|ref|XP_003458047.1| PREDICTED: proteasome subunit beta type-7-like isoform 1
[Oreochromis niloticus]
Length = 275
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 92/204 (45%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 33 KTPKPMKTGTTIAGVVFKDGVVLGADTRATSDEVVADKMCAKIHYIAPNIYCCGAGTAAD 92
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y R + + +L+LGGV
Sbjct: 93 TE---KTTDLLSSNLTIFSLNSGRNPRVVMAVNILQDMLYRYRGQ---IGANLILGGVDC 146
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + +++ G G+ A IL D + +L E +L+ ++ +
Sbjct: 147 TGNHLYTVGPYGDVDKVPYLSMGSGDLAALGILEDGFKPDLELEPAKELVRAAIQAGIMN 206
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +PY
Sbjct: 207 DLGSGNNIDICVITKQGVDYIRPY 230
>gi|393243139|gb|EJD50655.1| proteasome subunit [Auricularia delicata TFB-10046 SS5]
Length = 275
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 90/201 (44%), Gaps = 12/201 (5%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V Y DGI++ AD + G + K+ E+I I ++ +G +D +
Sbjct: 34 TGTTIVGCLYADGIVLGADTRATEGDIVADKNCEKIHYISENIRCCGAGTAADTE----- 88
Query: 86 LDELILYDNMWDDGNSLGPKE----LHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYL 141
++ NM S G + + L ++++ + + +LVL GV +L
Sbjct: 89 FTTALISSNMALHELSTGRQARVVTAMTMLKQMLFRYQGH---VGAALVLAGVDATGPHL 145
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ G + +V G G+ A + W N++ E+G+ L+ ++ ++ D +
Sbjct: 146 FTIHPHGSTDKLPYVTMGSGSLAAMAVFESRWKPNMTREEGIALVSAAIQAGIFNDLGSG 205
Query: 202 NKLQIAKITEEGTTISQPYAL 222
+ + + IT+ T + + Y +
Sbjct: 206 SNVDVCVITKSRTDMYRNYEM 226
>gi|145505061|ref|XP_001438497.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405669|emb|CAK71100.1| unnamed protein product [Paramecium tetraurelia]
Length = 275
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 92/195 (47%), Gaps = 5/195 (2%)
Query: 21 QLPYV-TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
++P+ TGT++V + ++ G++MAAD + GS + K+ E++ P+ + +G +D
Sbjct: 32 EMPFTKTGTTIVGVIFEGGVVMAADTRATAGSIVADKNCEKLHPLAPNIWAAGAGTAADL 91
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
+ + + + + S E+ + LT ++ R + +L++GG+ +
Sbjct: 92 HHQCAHFNAKLKLQRLNLNRQSR-VNEVITKLTTKLFPYRGH---IGVALIIGGIDSNGP 147
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
L VS G + G G+ A IL ++ + L+ + + L + + ++ D
Sbjct: 148 QLASVSPHGNYVYHPFQSMGSGSLAALGILEAKFQDGLTKQQAIDLAIEAIEAGIFHDMG 207
Query: 200 AVNKLQIAKITEEGT 214
+ + + + IT+EG
Sbjct: 208 SGSNVDVVAITKEGV 222
>gi|398389665|ref|XP_003848293.1| proteasome core particle subunit beta 2 [Zymoseptoria tritici
IPO323]
gi|339468168|gb|EGP83269.1| hypothetical protein MYCGRDRAFT_101520 [Zymoseptoria tritici
IPO323]
Length = 279
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 6/196 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V Y G+++AAD + G + K+ E++ I +G +D +
Sbjct: 28 TGTTIVGCLYDGGVVIAADTRATSGPIVADKNCEKLHYISPQIWCAGAGTAADTE----- 82
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFD-PLWNSLVLGGVKNGQKYLGMV 144
I+ N+ S G K + ++ ++ + LV+ G +L V
Sbjct: 83 FTTAIISSNLELHALSTGRKPRVVTVMTLLKQHLFRYQGHIGAYLVVAGCDPTGSHLFTV 142
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + +V G G+ A + W ++LS ED VKL + ++ ++ D + + +
Sbjct: 143 HAHGSTDKLPYVTMGSGSLAAMSVFETSWKQDLSREDAVKLCSEAIQAGIWNDLGSGSNV 202
Query: 205 QIAKITEEGTTISQPY 220
+ IT E T + + Y
Sbjct: 203 DVCVITPEKTELLRNY 218
>gi|225192936|dbj|BAH29706.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVMFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E KL+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDGFQHDLELEKAKKLVRDAVHSGIMN 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTF 225
D + N + I IT EG +P+ F
Sbjct: 198 DLGSGNNIDICVITAEGVDYIRPFQESEF 226
>gi|389595111|ref|XP_003722778.1| putative proteasome beta 2 subunit [Leishmania major strain
Friedlin]
gi|323364006|emb|CBZ13012.1| putative proteasome beta 2 subunit [Leishmania major strain
Friedlin]
Length = 254
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + YKDG+++ AD + GS + K +I + + + +G +D E + N
Sbjct: 28 TGTTIVGVVYKDGVVLGADTRATEGSIVADKCCRKIHYMAPNIMCCGAGTSAD-TEAVTN 86
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G E + L R +Y + + +LVLGGV +L ++
Sbjct: 87 MVSSHLALHRLETGKQSRVLEALTLLKRHLYRYQGH---VSAALVLGGVDVEGPFLATIA 143
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G V G G+ A L + +N++ E+ +L+ + ++ D + ++
Sbjct: 144 PHGSTDRLPFVTMGSGSIAAMAQLEAAYKDNMTCEEAKELVTSAIHKGIFNDPYSGTQVD 203
Query: 206 IAKITEEGTTISQPY 220
+ IT+ T ++ Y
Sbjct: 204 VCVITKGKTELTIGY 218
>gi|198453332|ref|XP_002137648.1| GA26418 [Drosophila pseudoobscura pseudoobscura]
gi|198132314|gb|EDY68206.1| GA26418 [Drosophila pseudoobscura pseudoobscura]
Length = 312
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/212 (22%), Positives = 91/212 (42%), Gaps = 15/212 (7%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TG++VV +KY+DG+++A D G+ I +++I + ++ G SG D ++
Sbjct: 45 PTTTGSTVVGIKYRDGVILATDRQGTADGMITTNCMKKIYRLQENIYAGGSGVCGDLHQV 104
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
R L + + G + + ++ ++Y + + ++++GGV NG L
Sbjct: 105 AR-LTRAEMDLHQLKMGCKVPVVCANHFVKHMLYRYQGN---IKITMLIGGVDNGGPSLY 160
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
G + A G GN A P+L W+ +L + L +R + D + +
Sbjct: 161 STWFEGSTTKIPFAAQGSGNCAALPVLEKGWNASLDEKSAESLAIDAVRSGIRNDLYSGS 220
Query: 203 KLQIAKITEE-----------GTTISQPYALK 223
+ I I + G T+ +P L+
Sbjct: 221 PIHICIIRADYSVSLYDKIFAGITVPRPPVLR 252
>gi|448382258|ref|ZP_21562014.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
thermotolerans DSM 11522]
gi|445662091|gb|ELZ14865.1| proteasome endopeptidase complex, beta subunit [Haloterrigena
thermotolerans DSM 11522]
Length = 243
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P +L+G+ G F LR E+ LY
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISTLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ G ++ + L + + R F + +LGGV + ++ + G E
Sbjct: 116 EARR--GENMSIEALATLAGN--FARGGPFFAIHP--ILGGVDDEGSHVYSIDPAGGVME 169
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA L + ++S E+ + + ++ + RD + N + + +IT+E
Sbjct: 170 DDYTVTGSGMQLAYGHLEQAYEPDMSTEEAKTVAARGIKSAVERDTGSGNGVFLCEITDE 229
Query: 213 GTTI 216
G I
Sbjct: 230 GVDI 233
>gi|91094821|ref|XP_971003.1| PREDICTED: similar to proteasome subunit beta 7 [Tribolium
castaneum]
gi|270006571|gb|EFA03019.1| hypothetical protein TcasGA2_TC010442 [Tribolium castaneum]
Length = 275
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/187 (21%), Positives = 83/187 (44%), Gaps = 10/187 (5%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + YKDG+++ AD + +T+ K+ E+I + + +G +D ++ +
Sbjct: 37 TGTTIVGITYKDGVILGADTRATEDTTVSDKNCEKIHYLASNMYCCGAGTAADTEQTTQM 96
Query: 86 LDELILYDNMWDDGN---SLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
+ + ++ + + + L YL R + +LVLGGV +L
Sbjct: 97 ISSQLELHRLFTNRTPRVATANQMLKQYLFRYQ-------GYIGAALVLGGVDVTGPHLY 149
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ G + + G G+ A + W +L E+GVKL+ + ++ D + +
Sbjct: 150 SIYPHGSTDKLPYTTMGSGSLAAMAVFESRWKPDLDEEEGVKLVRDAIAAGIFNDLGSGS 209
Query: 203 KLQIAKI 209
+ + I
Sbjct: 210 NVDVCII 216
>gi|225193025|dbj|BAH29646.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 91/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPMKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + V +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHVGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|448627583|ref|ZP_21672049.1| proteasome subunit alpha [Haloarcula vallismortis ATCC 29715]
gi|445758891|gb|EMA10187.1| proteasome subunit alpha [Haloarcula vallismortis ATCC 29715]
Length = 240
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P +L+G+ G F LR E+ LY
Sbjct: 56 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFIRTLRA--EVNLY 113
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ G + K L + + R F + +LGGV + ++ + G +
Sbjct: 114 EARR--GEDISMKALSTLAGN--FARGGPF--FAINPILGGVDDDGHHVYSIDPAGGVMK 167
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G +A L D + E+++ E+ ++ + RD + N + +A +T E
Sbjct: 168 DDYTVTGSGLTVAYGTLEDRYEEDMTNEEAKEVAAASINAAAERDTGSGNGIYLADVTAE 227
Query: 213 GTTIS 217
G I+
Sbjct: 228 GVDIN 232
>gi|268554105|ref|XP_002635040.1| C. briggsae CBR-PBS-1 protein [Caenorhabditis briggsae]
Length = 242
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR- 84
TGT+++A++Y G+++ D S GS I ++ +I PI + ++ SG +D Q +
Sbjct: 25 TGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITDNMVVCRSGSAADTQAIADI 84
Query: 85 ---NLDELILYDNMWDDGNSLGPKELH---SYLTRVMYNRRNKFDPLWNSLVLGGVKN-- 136
++D + +N P ++ + +YN R + L S+++ G +
Sbjct: 85 AKYHIDVYTMTENK--------PVTIYRSSQIFRQFLYNYREQ---LSASVLVAGWDSEL 133
Query: 137 -GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLY 195
GQ Y + + G A+G G+ + L +W +L+ E+ ++++ + + +
Sbjct: 134 GGQVY--AIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPDLTLEECKAIVKQAVGLATF 191
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPT 235
RD S+ +++A I + G+ K GF Q PT
Sbjct: 192 RDGSSGGVVRLAVIDKTGSKFELFRPDKP--GFPFVQTPT 229
>gi|225193028|dbj|BAH29648.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193055|dbj|BAH29666.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPMKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E KL+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDGFQHDLELEKAKKLVRDAVHSGIMN 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTF 225
D + N + I IT EG +P+ F
Sbjct: 198 DLGSGNNIDICVITAEGVDYIRPFQESEF 226
>gi|146101733|ref|XP_001469191.1| putative proteasome beta 2 subunit [Leishmania infantum JPCM5]
gi|398023611|ref|XP_003864967.1| proteasome beta 2 subunit, putative [Leishmania donovani]
gi|134073560|emb|CAM72293.1| putative proteasome beta 2 subunit [Leishmania infantum JPCM5]
gi|322503203|emb|CBZ38287.1| proteasome beta 2 subunit, putative [Leishmania donovani]
Length = 254
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 4/191 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + YKDG+++ AD + GS + K +I + + + +G +D E + N
Sbjct: 28 TGTTIVGVVYKDGVVLGADTRATEGSIVADKCCRKIHYMAPNIMCCGAGTSAD-TEAVTN 86
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G E + L R +Y + + +LVLGGV +L ++
Sbjct: 87 MVSSHLALHRLETGKQSRVLEALTLLKRHLYRYQGH---VSAALVLGGVDVEGPFLATIA 143
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G V G G+ A L + +N++ E+ +L+ + ++ D + ++
Sbjct: 144 PHGSTDRLPFVTMGSGSIAAMAQLEVAYKDNMTCEEAKELVTSAIHKGIFNDPYSGTQVD 203
Query: 206 IAKITEEGTTI 216
+ IT++ T +
Sbjct: 204 VCVITKDKTEL 214
>gi|240281182|gb|EER44685.1| proteasome component [Ajellomyces capsulatus H143]
Length = 227
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 83/192 (43%), Gaps = 11/192 (5%)
Query: 4 IQAKQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKP 63
++A V P + G ++ + KD L+AA G+TI S ++ +
Sbjct: 2 VKAPSSRVSPVQASPPEVIAASCGEVLLGITGKDFTLIAASKAAMRGATILKASDDKTRE 61
Query: 64 IGKHSLLGASGEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSY----LTRVMYNRR 119
+ KH+++ SGE D + + + +M ++ L P + S+ L R + +RR
Sbjct: 62 LSKHTIMAFSGEAGDTVQFAEYIQANVQLYSMRNEAE-LSPSAVASFVRGELARSLRSRR 120
Query: 120 NKFDPLWNSLVLGGVK--NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENL 177
P +L+LGGV + L + + + A G+ + IL H ++
Sbjct: 121 ----PYTVNLLLGGVDPITEKPSLYWLDYLAALAPVPYAAHGYAQYYCLSILDKHHHPDI 176
Query: 178 SYEDGVKLLEKC 189
+ E G+KLLE C
Sbjct: 177 TLEQGLKLLEMC 188
>gi|352682834|ref|YP_004893358.1| proteasome subunit beta [Thermoproteus tenax Kra 1]
gi|350275633|emb|CCC82280.1| proteasome, beta subunit [Thermoproteus tenax Kra 1]
Length = 204
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 7/176 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y G + V ++ KDG+++AA+ +YG S +++ + + ++G I+D Q L
Sbjct: 5 YNVGATAVGIRAKDGVVLAAEKRITYGFYSLSSSGKKVFIVNDRMAIASAGVIADMQTLA 64
Query: 84 RNLDELILYDNMWDDGNSLGPK--ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYL 141
+ L + M++ P + L+ +M+NRR + P +++GG ++
Sbjct: 65 KILR---VNAKMYELDAKRKPSVAAMAKLLSIIMFNRR--WMPFIAEVLVGGYDEEGPHV 119
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
++ +G ED + A G G +A IL + +++ + KL +R L RD
Sbjct: 120 FVLDPVGSLIEDDYAALGTGAKMAIGILDSGYKKDIDVVEARKLAINAIRAALERD 175
>gi|225193058|dbj|BAH29668.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L V+Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDVLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|225192960|dbj|BAH29692.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225192989|dbj|BAH29622.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193004|dbj|BAH29632.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193019|dbj|BAH29642.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193070|dbj|BAH29676.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E KL+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDGFQHDLELEKAKKLVRDAVHSGIMN 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTF 225
D + N + I IT EG +P+ F
Sbjct: 198 DLGSGNNIDICVITAEGVDYIRPFQESEF 226
>gi|386002905|ref|YP_005921204.1| proteasome subunit beta [Methanosaeta harundinacea 6Ac]
gi|357210961|gb|AET65581.1| Proteasome subunit beta [Methanosaeta harundinacea 6Ac]
Length = 179
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 6/170 (3%)
Query: 50 GSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD-ELILYDNMWDDGNSLGPKELH 108
G I + ++I I L +G + D Q L+R + E LY+ G + +
Sbjct: 2 GHFIASTTAQKIYQIADRVGLTTAGVVGDAQSLVRMIQVESKLYN--MQRGEPMTVRGTT 59
Query: 109 SYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQKYLGMVSMIGVNFEDSHVATGFGNHLARP 167
S L+ V+ +RR + P L+LGGV K G + + ++ G E VATG G+ A
Sbjct: 60 SLLSNVLASRR--YFPFMVQLLLGGVDKKGPQLFSLDALGGSIQEQKVVATGSGSPTAYG 117
Query: 168 ILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGTTIS 217
+L + ++ E+G+KL + + + RD ++ + +Q KIT G ++
Sbjct: 118 VLEALYDPEMTVEEGMKLGVRAIHNAMKRDSASGDVIQAVKITAGGYEVA 167
>gi|237833495|ref|XP_002366045.1| proteasome component PRE3 precursor, putative [Toxoplasma gondii
ME49]
gi|211963709|gb|EEA98904.1| proteasome component PRE3 precursor, putative [Toxoplasma gondii
ME49]
gi|221486248|gb|EEE24509.1| proteasome component PRE3 precursor / proteasome subunit beta type
6 precursor, putative [Toxoplasma gondii GT1]
Length = 245
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 87/191 (45%), Gaps = 9/191 (4%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++VA+ +K G+++ AD S GS + ++ +I + + + SG +D Q + +
Sbjct: 44 TGTTIVAVSFKGGVVLGADTRTSAGSYVVNRAARKISRVHERICVCRSGSAADTQAVTQI 103
Query: 86 LDELI-LYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG---VKNGQKYL 141
+ I Y G + + + Y + D L L++ G VK GQ Y
Sbjct: 104 VKLYIQQYAQELPKGEEPRVEAAANVFQSLCYQHK---DALTAGLIVAGFDKVKGGQIY- 159
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ + G + A G G+ + + +N++ E+ V L++ + + RD S+
Sbjct: 160 -ALPLGGALVPMQYTAGGSGSAFISAYMDANFKQNMTQEEAVNLVKNSVAYAISRDGSSG 218
Query: 202 NKLQIAKITEE 212
+++ ITE+
Sbjct: 219 GMVRVVVITED 229
>gi|145507274|ref|XP_001439592.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406787|emb|CAK72195.1| unnamed protein product [Paramecium tetraurelia]
Length = 275
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 91/195 (46%), Gaps = 5/195 (2%)
Query: 21 QLPYV-TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
++P+ TGT++V + + G++MAAD + GS + K+ E++ P+ + +G +D
Sbjct: 32 EMPFTKTGTTIVGVIFDGGVVMAADTRATAGSIVADKNCEKLHPLAPNIWAAGAGTAADL 91
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
+ + + + + S E+ + LT ++ R + +L++GG+ +
Sbjct: 92 HHQCAHFNAKLKLQRLNLNRQSR-VNEVITKLTAKLFPYRGH---IGVALIIGGIDSNGP 147
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
L VS G + G G+ A IL ++ + L+ + + L + + ++ D
Sbjct: 148 QLASVSPHGNYVYHPFQSMGSGSLAALGILEAKFQDGLTKQQAIDLAIEAIEAGIFHDMG 207
Query: 200 AVNKLQIAKITEEGT 214
+ + + + IT+EG
Sbjct: 208 SGSNVDVVAITKEGV 222
>gi|162606488|ref|XP_001713274.1| 26S proteasome, beta-1 SU [Guillardia theta]
gi|12580740|emb|CAC27058.1| 26S proteasome, beta-1 SU [Guillardia theta]
Length = 198
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 100/196 (51%), Gaps = 12/196 (6%)
Query: 22 LPYVT-GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQ 80
+ YV GT++++LKY +GI++ +D + GS I ++ +++ + K + SG+ +D Q
Sbjct: 2 INYVNLGTTIISLKYINGIIIGSDSKVNIGSFISNRNSDKVFQLSKFIVCCRSGKSADNQ 61
Query: 81 ELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNG- 137
L L ++ + + G + +E+ ++ +MYN L +++ G NG
Sbjct: 62 NLCDKLKNYVI-EKEFIYGRHVLVREVVQFIKTLMYNCN-----LECTMICAGWDCTNGF 115
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
Q YL ++ G + S + G G++ ++ + ++E +S E+ KL+ K + + + +D
Sbjct: 116 QNYL--ITNGGGLIQKSIIVNGGGSNYISGLIDNNFNETMSLEECEKLITKSLSIAINKD 173
Query: 198 RSAVNKLQIAKITEEG 213
+ +++ I+ G
Sbjct: 174 TRSGGIIRLTYISSAG 189
>gi|296109873|ref|YP_003616822.1| proteasome endopeptidase complex, alpha subunit [methanocaldococcus
infernus ME]
gi|295434687|gb|ADG13858.1| proteasome endopeptidase complex, alpha subunit [Methanocaldococcus
infernus ME]
Length = 247
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 73/162 (45%), Gaps = 6/162 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL-RN 85
GT+ V + KDG+++A D + I+ +S+E+I I H SG ++D + L+ R
Sbjct: 35 GTTAVGIVCKDGVILAVDRRVT-SKLIKIRSIEKIYQIDDHVAAATSGLVADARVLIDRA 93
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRV--MYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
E +Y + G + + L + + Y + P SL++ G+ G+ L
Sbjct: 94 RLEAQIYRVTY--GEEISIELLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKGEGRLFE 151
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKL 185
G E A G G IL E+ E++ E+G++L
Sbjct: 152 TDPSGALIEYKATAIGSGRQTVMEILEKEYKEDMDLEEGLRL 193
>gi|297206692|ref|NP_001171882.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|62122595|dbj|BAD93263.1| PSMB10 [Oryzias latipes]
gi|295901534|dbj|BAJ07284.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 275
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 33 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 92
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 93 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 146
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E KL+ + +
Sbjct: 147 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDGFQHDLELEKAKKLVRDAVHSGIMN 206
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTF 225
D + N + I IT EG +P+ F
Sbjct: 207 DLGSGNNIDICVITAEGVDYIRPFQESEF 235
>gi|448452625|ref|ZP_21593449.1| proteasome subunit alpha [Halorubrum litoreum JCM 13561]
gi|445808532|gb|EMA58596.1| proteasome subunit alpha [Halorubrum litoreum JCM 13561]
Length = 263
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G V ++ DG++ A M S + +S+E++ + H ++G ++D ++L+ +L
Sbjct: 36 GAPSVGVRTTDGVVFVA-MSRPSSSLMEAESIEKLHKLDDHVGTASAGHVADARQLI-DL 93
Query: 87 DELILYDNMWDDGNSLGPKELHSYLT-RVMYN-RRNKFDPLWNSLVLGGVKNGQKYLGMV 144
N G +G + L ++T + N +R P +L++GG+ +G+ L
Sbjct: 94 ARRQSQGNRLRYGEPVGVETLTKFVTDHIQENTQRGGTRPYGAALLIGGIDDGEPRLFAA 153
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E G G + L DEW ++LS DG++L + + D + L
Sbjct: 154 DPSGTPNEWKATVIGGGRQEIQGHLEDEWTDDLSLSDGIELAVAALAA--HDDEFEPSDL 211
Query: 205 QIAKITE 211
+A +TE
Sbjct: 212 AVAAVTE 218
>gi|448685099|ref|ZP_21693109.1| proteasome subunit alpha [Haloarcula japonica DSM 6131]
gi|445782302|gb|EMA33149.1| proteasome subunit alpha [Haloarcula japonica DSM 6131]
Length = 244
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V ++ +DG+++AAD + I S+E+I I H + ++G ++D ++L+
Sbjct: 35 GTASVGVRTEDGVVIAADR-HARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVA 93
Query: 87 DELILYDNM-WDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
+ + +D+ S+ KE+ Y+ + Y + P +L++ G+++G+ L
Sbjct: 94 RRQSQVNRLRYDEPASVESLTKEITDYIQQ--YTQTGGARPFGVALLVAGIEDGEPRLFE 151
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCM 190
G +E VA G + L DE+ E + E G++L + +
Sbjct: 152 TDPSGTPYEWQAVAIGGSREDIQSFLEDEYAEGMDLEGGIELALRAL 198
>gi|59275962|dbj|BAD89549.1| proteasome subunit [Oncorhynchus mykiss]
gi|225705848|gb|ACO08770.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
gi|306494797|gb|ADM95869.1| PSMB10 [Oncorhynchus mykiss]
Length = 277
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 89/200 (44%), Gaps = 8/200 (4%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TGT++ + K+G+++ AD + G + K +I I + +G +D ++
Sbjct: 39 PMKTGTTIAGVLCKNGVVLGADTRATSGEVVADKMCAKIHYISPNIYCCGAGTAADTEKT 98
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKNGQKY 140
L + +M N P+ + + L +++ R + + SL+LGGV +
Sbjct: 99 TDLLSSNLTIFSMNSGRN---PRVVMAVNILQDMLFRYRGQ---IGASLILGGVDCTGNH 152
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
L V G ++A G G+ A IL D + N+ E+ +L+ + + D +
Sbjct: 153 LYKVGPYGSIDNVPYLAMGSGDLAALGILEDRFKANMEMEEAKELVRDAIHSGIMSDLGS 212
Query: 201 VNKLQIAKITEEGTTISQPY 220
N + I IT++G +PY
Sbjct: 213 GNNIDICVITKQGVDYIRPY 232
>gi|429961765|gb|ELA41310.1| hypothetical protein VICG_01683 [Vittaforma corneae ATCC 50505]
Length = 230
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 88/200 (44%), Gaps = 10/200 (5%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V +KYK G+++ AD + G + K+ E+I I + +G +D + R
Sbjct: 5 TGTTIVGIKYKTGVVLCADTRSTSGPLVADKNCEKIHFIAPKIMCCGAGTAADTGRVTRM 64
Query: 86 LD---ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
+L Y +M D S + + YL N + +LVLGGV + +L
Sbjct: 65 ASKKLQLFSYKHMKDPYVSHCERIICDYL-------HNYGGQIQAALVLGGVDSNGVFLY 117
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ G + + G G+ A ++ ++ +N++ E + L ++ + D + +
Sbjct: 118 SIHPNGYSSSLEFTSLGSGSLAAIAVIESKFEKNMTKEQAIALGVDAVKAGILNDLYSGS 177
Query: 203 KLQIAKITEEGTTISQPYAL 222
+ + I EG + Y +
Sbjct: 178 NVDVCVIDYEGVECHRNYLI 197
>gi|378725544|gb|EHY52003.1| proteasome subunit beta type-2 [Exophiala dermatitidis NIH/UT8656]
Length = 203
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 9/165 (5%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD---FQELLRNL 86
++ L +D ++AA G+TI S ++ + + K++LL SGE D F E ++
Sbjct: 4 LLGLTGRDFTIIAASKAAMRGATILKSSDDKTRQLNKNTLLAFSGEAGDTIQFAEFIQAN 63
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK--NGQKYLGMV 144
L N D G S + S L R + +R+ P +L+LGG+ Q L +
Sbjct: 64 IALYTMRNETDLGPSAVASFIRSELARSLRSRK----PYNVNLLLGGMDPITKQPSLYWL 119
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKC 189
+ + + + A G+ + IL H ++S+E G+K+L C
Sbjct: 120 DYLASSAKVPYAAHGYAQYYCLSILDKHHHPDISFEQGMKILRMC 164
>gi|254566233|ref|XP_002490227.1| Beta 4 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|238030023|emb|CAY67946.1| Beta 4 subunit of the 20S proteasome [Komagataella pastoris GS115]
gi|328350622|emb|CCA37022.1| 20S proteasome subunit beta 4 [Komagataella pastoris CBS 7435]
Length = 196
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 84/189 (44%), Gaps = 3/189 (1%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDEL 89
V+ +K DG+++A + G +I + ++ + + H+L+ +GE D + +
Sbjct: 4 VLGIKVSDGVVIATSKAATRGISILKDTDDKTRDLSDHNLMAFTGESGDTVQFAEYIQAN 63
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKY--LGMVSMI 147
I NM + G+ L P + ++ + P + +L G +K L + +
Sbjct: 64 IQLYNMRE-GHELSPYAVSHFVRNTLAKSLRSRKPYQVNALLAGYDTDKKTPSLSWIDYL 122
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIA 207
G + + A G+ +L + ++++ EDG++LL+ C + L R LQ+
Sbjct: 123 GTKADLPYAAHGYAAFYTLSLLDHHYRKDMTVEDGLRLLKLCNKELNTRMPIDFKGLQVK 182
Query: 208 KITEEGTTI 216
+ ++G +
Sbjct: 183 VVNKDGVKV 191
>gi|336254146|ref|YP_004597253.1| 20S proteasome subunits A and B [Halopiger xanaduensis SH-6]
gi|335338135|gb|AEH37374.1| 20S proteasome A and B subunits [Halopiger xanaduensis SH-6]
Length = 258
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 88/195 (45%), Gaps = 9/195 (4%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGST-IRYKSVERIKPIGKHSLLGASGEISDFQELLR 84
TGT+ V L DG ++AAD S G + K+ +I P+ + + SG +SD Q +R
Sbjct: 46 TGTTTVGLAGTDGAVLAADARASLGGQFVTNKTARKIDPVDDRTAVAFSGSVSDAQSFVR 105
Query: 85 NL-DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
+L EL YD D S+ E + + + RR + L LVL GV + + +
Sbjct: 106 HLRAELSQYDLERDGRASV---ETAATVAGDLV-RRGPYRIL--DLVLAGVDD-EPAVYQ 158
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+ G + A+G G LA L + S + + + +R RD ++ +
Sbjct: 159 IGGGGGVMRAPYAASGSGMQLAYGALEAAYEPGRSVAELRPIAARAVRSAAERDTASGDG 218
Query: 204 LQIAKITEEGTTISQ 218
+ IA IT++ I +
Sbjct: 219 MTIATITDDDLAIER 233
>gi|195151889|ref|XP_002016871.1| GL21838 [Drosophila persimilis]
gi|194111928|gb|EDW33971.1| GL21838 [Drosophila persimilis]
Length = 312
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 4/187 (2%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TG++VV +KY+DG+++A D G+ I +++I + ++ G SG D ++
Sbjct: 45 PTTTGSTVVGIKYRDGVILATDRQGTADGRITTNCMKKIYRLQENIYAGGSGVCGDLHQV 104
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLG 142
R L + + G + + ++ ++Y + + ++++GGV NG L
Sbjct: 105 AR-LTRAEMDLHQLQMGCKVPVVCANHFVKHMLYRYQGN---IKITMLIGGVDNGGPSLY 160
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
G + A G GN A P+L W+ +L + L +R + D + +
Sbjct: 161 STWFEGSTTKIPFAAQGSGNCAALPVLEKGWNASLDEKSAESLAIDAVRSGIRNDLYSGS 220
Query: 203 KLQIAKI 209
+ I I
Sbjct: 221 PIHICII 227
>gi|198460983|ref|XP_001361869.2| GA21041 [Drosophila pseudoobscura pseudoobscura]
gi|198137197|gb|EAL26448.2| GA21041 [Drosophila pseudoobscura pseudoobscura]
Length = 225
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
T P TGT+++A+++ G+++ AD S G + + +++ I SG +D
Sbjct: 8 TDTPVSTGTTIMAVEFDGGVVIGADSRTSSGPYVANRVTDKLTRITDKIYCCRSGSAADT 67
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG---VKN 136
Q + + + Y ++L E S YN R D L +++ G +
Sbjct: 68 QAIADIVAYSLNYHENQTSKDAL-VFEAASEFRNYCYNYR---DSLLAGIIVAGWDEQRG 123
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
GQ + + + G+ + G G+ +R+ +HE +S E+ VK ++ ++ +Y
Sbjct: 124 GQVF--SIPLGGMLTREPCTIGGSGSSFIYGYVREHFHEGMSKEECVKFVKTAVQHAIYH 181
Query: 197 DRSAVNKLQIAKITEEG 213
D S+ +++ IT+EG
Sbjct: 182 DGSSGGVVRVGIITKEG 198
>gi|159041872|ref|YP_001541124.1| proteasome endopeptidase complex protein [Caldivirga maquilingensis
IC-167]
gi|302595705|sp|A8M8R5.1|PSB2_CALMQ RecName: Full=Proteasome subunit beta 2; AltName: Full=20S
proteasome beta subunit 2; AltName: Full=Proteasome core
protein PsmB 2; Flags: Precursor
gi|157920707|gb|ABW02134.1| Proteasome endopeptidase complex [Caldivirga maquilingensis IC-167]
Length = 200
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 92/193 (47%), Gaps = 4/193 (2%)
Query: 21 QLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQ 80
QL +TGT+V +K KDG+++AA+ SYG + KS +++ PI L +SG ++D Q
Sbjct: 4 QLELMTGTTV-GIKAKDGVVLAAEKRVSYGFYLMSKSGKKVYPITNRIGLASSGILADIQ 62
Query: 81 ELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKY 140
+ + + I NM + + L +M +NK+ P ++GG+
Sbjct: 63 TITKVIRANIA--NMEIEMKRPVSVRAAAKLLSIML-FQNKYMPYIAETMVGGIDEEGPK 119
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
L ++ G ED A G G A ++ + +++ ++ +L K ++ + RD ++
Sbjct: 120 LFILDSWGSLIEDDFAALGNGARTAIGLIETGYSSSITVKEAKELAIKAIKEAIARDPTS 179
Query: 201 VNKLQIAKITEEG 213
+ + IT G
Sbjct: 180 GDGIDTLVITGNG 192
>gi|452004237|gb|EMD96693.1| hypothetical protein COCHEDRAFT_1018526 [Cochliobolus
heterostrophus C5]
Length = 276
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 6/196 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + G+++AAD + G + K+ E++ I +G +D +
Sbjct: 28 TGTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHFIAPQIWCAGAGTAADTE----- 82
Query: 86 LDELILYDNMWDDGNSLGPK-ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
I+ N+ S G K + + +T + + + LV+ GV +L V
Sbjct: 83 FTTAIISSNLELHALSTGRKPRVVTCMTMLKQHLFRHQGHIGAYLVVAGVDPTGAHLFTV 142
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + +V G G+ A + +W +L+ ++ V L + ++ D + + +
Sbjct: 143 HAHGSTDKLPYVTMGSGSLAAMSVFETQWKAHLTRDEAVTLCSNAIEAGIWNDLGSGSNV 202
Query: 205 QIAKITEEGTTISQPY 220
+A ITEE TT+ + Y
Sbjct: 203 DVAVITEEKTTLMRNY 218
>gi|448507967|ref|ZP_21615267.1| proteasome subunit alpha [Halorubrum distributum JCM 9100]
gi|445697904|gb|ELZ49961.1| proteasome subunit alpha [Halorubrum distributum JCM 9100]
Length = 262
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G V ++ DG++ A M S + +S+E++ + H ++G ++D ++L+ +L
Sbjct: 35 GAPSVGVRTTDGVVFVA-MSRPSSSLMEAESIEKLHKLDDHVGTASAGHVADARQLI-DL 92
Query: 87 DELILYDNMWDDGNSLGPKELHSYLT-RVMYN-RRNKFDPLWNSLVLGGVKNGQKYLGMV 144
N G +G + L ++T + N +R P +L++GG+ +G+ L
Sbjct: 93 ARRQSQGNRLRYGEPVGVETLTKFVTDHIQENTQRGGTRPYGAALLIGGIDDGEPRLFAA 152
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E G G + L DEW ++LS DG++L + + D + L
Sbjct: 153 DPSGTPNEWKATVIGGGRQEIQGHLEDEWTDDLSLSDGIEL--AVAALAAHDDEFEPSDL 210
Query: 205 QIAKITE 211
+A +TE
Sbjct: 211 AVAAVTE 217
>gi|195170326|ref|XP_002025964.1| GL10209 [Drosophila persimilis]
gi|194110828|gb|EDW32871.1| GL10209 [Drosophila persimilis]
Length = 225
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 9/197 (4%)
Query: 20 TQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDF 79
T P TGT+++A+++ G+++ AD S G + + +++ I SG +D
Sbjct: 8 TDTPVSTGTTIMAVEFDGGVVIGADSRTSSGPYVANRVTDKLTRITDKIYCCRSGSAADT 67
Query: 80 QELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG---VKN 136
Q + + + Y ++L E S YN R D L +++ G +
Sbjct: 68 QAIADIVAYSLNYHENQTSKDAL-VFEAASEFRNYCYNYR---DSLLAGIIVAGWDEQRG 123
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
GQ + + + G+ + G G+ +R+ +HE +S E+ VK ++ ++ +Y
Sbjct: 124 GQVF--SIPLGGMLTREPCTIGGSGSSFIYGYVREHFHEGMSKEECVKFVKTAVQHAIYH 181
Query: 197 DRSAVNKLQIAKITEEG 213
D S+ +++ IT+EG
Sbjct: 182 DGSSGGVVRVGIITKEG 198
>gi|448518501|ref|ZP_21617578.1| proteasome subunit alpha [Halorubrum distributum JCM 10118]
gi|445705082|gb|ELZ56986.1| proteasome subunit alpha [Halorubrum distributum JCM 10118]
Length = 263
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G V ++ DG++ A M S + +S+E++ + H ++G ++D ++L+ +L
Sbjct: 36 GAPSVGVRTTDGVVFVA-MSRPSSSLMEAESIEKLHKLDDHVGTASAGHVADARQLI-DL 93
Query: 87 DELILYDNMWDDGNSLGPKELHSYLT-RVMYN-RRNKFDPLWNSLVLGGVKNGQKYLGMV 144
N G +G + L ++T + N +R P +L++GG+ +G+ L
Sbjct: 94 ARRQSQGNRLRYGEPVGVETLTKFVTDHIQENTQRGGTRPYGAALLIGGIDDGEPRLFAA 153
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E G G + L DEW ++LS DG++L + + D + L
Sbjct: 154 DPSGTPNEWKATVIGGGRQEIQGHLEDEWTDDLSLSDGIEL--AVAALAAHDDEFEPSDL 211
Query: 205 QIAKITE 211
+A +TE
Sbjct: 212 AVAAVTE 218
>gi|448534850|ref|ZP_21621947.1| proteasome subunit alpha [Halorubrum hochstenium ATCC 700873]
gi|445704001|gb|ELZ55921.1| proteasome subunit alpha [Halorubrum hochstenium ATCC 700873]
Length = 274
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 86/187 (45%), Gaps = 6/187 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G V ++ DG++ A M S + +S+E++ + H ++G ++D ++L+ +L
Sbjct: 36 GAPSVGVRTTDGVVFVA-MSRPSSSLMEAESIEKLHKLDDHLGTASAGHVADARQLI-DL 93
Query: 87 DELILYDNMWDDGNSLGPKELHSYLT-RVMYN-RRNKFDPLWNSLVLGGVKNGQKYLGMV 144
N G +G + L ++T + N +R P +L++GG+ +G+ L
Sbjct: 94 ARRQSQGNRLRYGEPVGVETLTKFVTDHIQENTQRGGTRPYGAALLIGGIDDGEPRLFAA 153
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E G G + L +EW ++LS EDG++L + + D + L
Sbjct: 154 DPSGTPNEWKATVIGGGRQDIQGHLEEEWTDDLSLEDGIELAVAALAA--HDDEFEPSDL 211
Query: 205 QIAKITE 211
+A +TE
Sbjct: 212 AVATVTE 218
>gi|84489103|ref|YP_447335.1| PsmB [Methanosphaera stadtmanae DSM 3091]
gi|121697945|sp|Q2NI68.1|PSB_METST RecName: Full=Proteasome subunit beta; AltName: Full=20S proteasome
beta subunit; AltName: Full=Proteasome core protein
PsmB; Flags: Precursor
gi|84372422|gb|ABC56692.1| PsmB [Methanosphaera stadtmanae DSM 3091]
Length = 205
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 8/197 (4%)
Query: 21 QLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQ 80
Q + GT+ V DG+++A + + GS + K+ +++ I +G +S Q
Sbjct: 3 QTENMEGTTTVGFVCTDGVVLATETRATMGSLVANKNADKLFQIDDKIGATIAGTVSHAQ 62
Query: 81 ELLRNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK 139
L+ L E+ LY + + L + ++ +R P + +L GV
Sbjct: 63 SLMDILKAEISLYK--LRNEKDMSIDALAVLTSNILKSR-----PYYVQTILAGVDKDGA 115
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
L + G D+ +TG G+ A +L D ++E+++ E+G K+ K + + RD
Sbjct: 116 KLYTLDPSGSYIPDTFTSTGSGSPYAFGVLEDRYNEDITTEEGKKIAIKAITSAMERDVY 175
Query: 200 AVNKLQIAKITEEGTTI 216
+ N ++ IT++G I
Sbjct: 176 SGNNYRLGVITKDGMKI 192
>gi|448425951|ref|ZP_21583059.1| proteasome subunit alpha [Halorubrum terrestre JCM 10247]
gi|448484981|ref|ZP_21606347.1| proteasome subunit alpha [Halorubrum arcis JCM 13916]
gi|445679912|gb|ELZ32365.1| proteasome subunit alpha [Halorubrum terrestre JCM 10247]
gi|445818674|gb|EMA68524.1| proteasome subunit alpha [Halorubrum arcis JCM 13916]
Length = 262
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 85/187 (45%), Gaps = 6/187 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G V ++ DG++ A M S + +S+E++ + H ++G ++D ++L+ +L
Sbjct: 35 GAPSVGVRTTDGVVFVA-MSRPSSSLMEAESIEKLHKLDDHVGTASAGHVADARQLI-DL 92
Query: 87 DELILYDNMWDDGNSLGPKELHSYLT-RVMYN-RRNKFDPLWNSLVLGGVKNGQKYLGMV 144
N G +G + L ++T + N +R P +L++GG+ +G+ L
Sbjct: 93 ARRQSQGNRLRYGEPVGVETLTKFVTDHIQENTQRGGTRPYGAALLIGGIDDGEPRLFAA 152
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G E G G + L DEW ++LS DG++L + + D + L
Sbjct: 153 DPSGTPNEWKATVIGGGRQEIQGHLEDEWTDDLSLSDGIEL--AVAALAAHDDEFEPSDL 210
Query: 205 QIAKITE 211
+A +TE
Sbjct: 211 AVAAVTE 217
>gi|340721459|ref|XP_003399137.1| PREDICTED: proteasome subunit beta type-2-like [Bombus terrestris]
gi|350406548|ref|XP_003487808.1| PREDICTED: proteasome subunit beta type-2-like [Bombus impatiens]
Length = 207
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 4/197 (2%)
Query: 29 SVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDE 88
++ +++KD +L+AADM + + E+I + ++ SGE D + + +
Sbjct: 3 CLIGIQFKDFVLVAADMTTAQSIMVMKNDEEKIHKMSDKLIMAVSGESGDTTQFSEYIGK 62
Query: 89 LILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK-NGQKYLGMVSMI 147
I M +G L PK S+ R + + P + +L++ G N L + +
Sbjct: 63 NIQLYKMR-NGYELSPKAAASFTRRNLADYLRSRTPYFVNLLMAGYDVNSGPELYFIDYL 121
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHE-NLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
+ + A G+G + IL D +H+ + + E+ LL+KC+R + R + ++
Sbjct: 122 ASCVKVPYAAHGYGGFFSLSIL-DRYHKYDSTEEEAYILLKKCVREIHKRLIVNLPNFKV 180
Query: 207 AKITEEGTTISQPYALK 223
K+++EG +P K
Sbjct: 181 QKVSKEGIKELEPITAK 197
>gi|367019114|ref|XP_003658842.1| hypothetical protein MYCTH_2136659 [Myceliophthora thermophila ATCC
42464]
gi|347006109|gb|AEO53597.1| hypothetical protein MYCTH_2136659 [Myceliophthora thermophila ATCC
42464]
Length = 272
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 85/196 (43%), Gaps = 6/196 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V Y G+++AAD + G + K+ E++ I + +G +D +
Sbjct: 28 TGTTIVGCIYDGGVVIAADTRATSGPIVADKNCEKLHYIAPNIWCAGAGTAADTE----- 82
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNS-LVLGGVKNGQKYLGMV 144
++ N+ S G K ++ ++ + LV+ GV +L V
Sbjct: 83 FTTSLISSNLELHALSTGRKPRVVTAMTMLKQHLFRYQGYIGAYLVVAGVDPTGTHLFTV 142
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + +V G G+ A + +W +L+ E+ VKL + ++ D + + +
Sbjct: 143 HAHGSTDKLPYVTMGSGSLAAMAVFETQWKPSLTQEEAVKLCADAIEAGIWNDLGSGSNV 202
Query: 205 QIAKITEEGTTISQPY 220
+A IT E TT+ + Y
Sbjct: 203 DVAIITAEKTTLRRNY 218
>gi|195430422|ref|XP_002063254.1| GK21488 [Drosophila willistoni]
gi|194159339|gb|EDW74240.1| GK21488 [Drosophila willistoni]
Length = 225
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 93/202 (46%), Gaps = 9/202 (4%)
Query: 15 DPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASG 74
D T P TGT+++A+++ G+++ AD S G+ + + +++ I SG
Sbjct: 2 DDFNVTDKPVSTGTTIMAVEFDGGVVVGADSRTSSGAYVANRVTDKLTRITDKIYCCRSG 61
Query: 75 EISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG- 133
+D Q + + + Y + + ++ E S YN R D L +++ G
Sbjct: 62 SAADTQAIADIVAYSLNYHEIQTNRDAE-VWEAASEFRNFCYNYR---DSLMAGIIVAGW 117
Query: 134 --VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMR 191
+ GQ Y + + G+ ++ G G+ +R+ + E + E+ V+ ++K ++
Sbjct: 118 DAQRGGQVY--SIPLGGMLTREACTIGGSGSSFIYGFVREHYREGMQKEECVEFVKKAVQ 175
Query: 192 VLLYRDRSAVNKLQIAKITEEG 213
+Y D S+ ++I ITE+G
Sbjct: 176 HAIYHDGSSGGVVRIGIITEDG 197
>gi|388498812|gb|AFK37472.1| unknown [Medicago truncatula]
Length = 271
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V L ++DGI++ AD + G + K+ E+I + + +G +D E + +
Sbjct: 37 TGTTIVGLVFQDGIILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAAD-TEAVTD 95
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G + L R ++N + + +LVLGGV +L +
Sbjct: 96 MVSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGH---VSAALVLGGVDITGPHLHTIY 152
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G G G+ A + ++ E+LS ++GVKL+ + + ++ D + + +
Sbjct: 153 PHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVAESICAGIFNDLGSGSNVD 212
Query: 206 IAKITE 211
+ IT+
Sbjct: 213 VCVITK 218
>gi|315427032|dbj|BAJ48649.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
gi|343485700|dbj|BAJ51354.1| proteasome beta subunit [Candidatus Caldiarchaeum subterraneum]
Length = 201
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/192 (18%), Positives = 93/192 (48%), Gaps = 7/192 (3%)
Query: 24 YVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL 83
Y G + + ++ KD +++AA+ +YG + K ++ I +G ++D Q ++
Sbjct: 6 YYPGATTLGIRGKDSVVIAAEKRFAYGYFVMSKQARKVFKISNSVGAACAGVVADMQNMI 65
Query: 84 RNLDELILYDNMW--DDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYL 141
+ + ++ N++ + G K + L+ ++ N++ P + ++GG+ + ++
Sbjct: 66 KEVTAVV---NLYRLEQGVEPSVKTVAKILSWNLFG--NRYFPYFMETIVGGIDSQGPHV 120
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
++ +G ED + G G +A ++ + + +++S + L K ++ + RD +
Sbjct: 121 IVLDPLGSMIEDDYAVVGTGAEVAVGVIENLYRKDMSATEIRDLATKAIKASIARDAGSG 180
Query: 202 NKLQIAKITEEG 213
N + + T++G
Sbjct: 181 NGIDLLLYTQKG 192
>gi|308463733|ref|XP_003094138.1| CRE-PBS-1 protein [Caenorhabditis remanei]
gi|308248129|gb|EFO92081.1| CRE-PBS-1 protein [Caenorhabditis remanei]
Length = 239
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 102/220 (46%), Gaps = 25/220 (11%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR- 84
TGT+++A++Y G+++ D S GS I ++ +I PI ++ ++ SG +D Q +
Sbjct: 22 TGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITENMVVCRSGSAADTQAIADI 81
Query: 85 ---NLDELILYDNMWDDGNSLGPKELH---SYLTRVMYNRRNKFDPLWNSLVLGGVKN-- 136
++D + +N P ++ + +YN R + L S+++ G +
Sbjct: 82 AKYHIDVYTMTENK--------PVTIYRSSQIFRQFLYNYREQ---LSASVLVAGWDSEL 130
Query: 137 -GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLY 195
GQ Y + + G A+G G+ + L +W +L+ ++ ++++ + + +
Sbjct: 131 GGQVY--AIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPDLTLDECKAIVKQAVGLATF 188
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPT 235
RD S+ +++A I + G+ K GF Q PT
Sbjct: 189 RDGSSGGVVRLAVIDKTGSKFELFRPDKP--GFPFVQTPT 226
>gi|225192957|dbj|BAH29694.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPMKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E KL+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDGFQHDLELERAKKLVRDAVHSGIMN 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTF 225
D + N + I IT EG +P+ F
Sbjct: 198 DLGSGNNIDICVITAEGVDYIRPFQESEF 226
>gi|320101460|ref|YP_004177052.1| proteasome endopeptidase complex subunit beta [Desulfurococcus
mucosus DSM 2162]
gi|319753812|gb|ADV65570.1| proteasome endopeptidase complex, beta component [Desulfurococcus
mucosus DSM 2162]
Length = 208
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 82/170 (48%), Gaps = 2/170 (1%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
T+ V L D +++AAD + G + +K+V++I I ++ L SG ++D Q ++
Sbjct: 8 TTTVGLVVGDYVVLAADKRATAGPMVYHKAVKKISRITDYAALTISGLVADAQYIV-EYA 66
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMI 147
+ D + G + L S ++ V+ + ++ P L+LGG + L + +
Sbjct: 67 RFLARDYEAETGKPISVGALASRISLVL-SVYLRYVPFIVQLLLGGRDHTGASLYYMDLY 125
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
G + ++ATG G+ +A +L + +LS E+ L K + + RD
Sbjct: 126 GSVTREKYMATGSGSPVAFGVLEQGYRSDLSLEEAKALAFKAVSSAIMRD 175
>gi|195927408|pdb|3C91|H Chain H, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927409|pdb|3C91|I Chain I, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927410|pdb|3C91|J Chain J, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927411|pdb|3C91|K Chain K, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927412|pdb|3C91|L Chain L, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927413|pdb|3C91|M Chain M, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927414|pdb|3C91|N Chain N, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927422|pdb|3C91|V Chain V, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927423|pdb|3C91|W Chain W, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927424|pdb|3C91|X Chain X, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927425|pdb|3C91|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927426|pdb|3C91|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927427|pdb|3C91|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927428|pdb|3C91|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With An Open Gate
gi|195927436|pdb|3C92|H Chain H, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927437|pdb|3C92|I Chain I, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927438|pdb|3C92|J Chain J, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927439|pdb|3C92|K Chain K, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927440|pdb|3C92|L Chain L, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927441|pdb|3C92|M Chain M, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927442|pdb|3C92|N Chain N, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927450|pdb|3C92|V Chain V, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927451|pdb|3C92|W Chain W, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927452|pdb|3C92|X Chain X, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927453|pdb|3C92|Y Chain Y, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927454|pdb|3C92|Z Chain Z, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927455|pdb|3C92|1 Chain 1, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|195927456|pdb|3C92|2 Chain 2, Thermoplasma Acidophilum 20s Proteasome With A Closed Gate
gi|262368054|pdb|3JRM|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368055|pdb|3JRM|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368056|pdb|3JRM|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368057|pdb|3JRM|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368058|pdb|3JRM|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368059|pdb|3JRM|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368060|pdb|3JRM|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368080|pdb|3JSE|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368081|pdb|3JSE|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368082|pdb|3JSE|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368083|pdb|3JSE|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368084|pdb|3JSE|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368085|pdb|3JSE|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368086|pdb|3JSE|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368101|pdb|3JTL|H Chain H, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368102|pdb|3JTL|I Chain I, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368103|pdb|3JTL|J Chain J, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368104|pdb|3JTL|K Chain K, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368105|pdb|3JTL|L Chain L, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368106|pdb|3JTL|M Chain M, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
gi|262368107|pdb|3JTL|N Chain N, Crystal Structure Of Archaeal 20s Proteasome In Complex
With Mutated P26 Activator
Length = 203
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
T+ V + KD ++MA + + + I +K+ +++ I ++ + +G + D Q L+R +
Sbjct: 1 TTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYMK 60
Query: 88 -ELILYD-----NMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYL 141
EL LY NM P E + L M N+ K+ P L++GG+
Sbjct: 61 AELELYRLQRRVNM--------PIEAVATLLSNMLNQ-VKYMPYMVQLLVGGIDTAPHVF 111
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ G + ED + +TG G+ +L ++ E ++ ++GV L+ + + RD ++
Sbjct: 112 S-IDAAGGSVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASG 170
Query: 202 NKLQIAKITEEGTTISQP 219
+ +A IT + + P
Sbjct: 171 GMIDVAVITRKDGYVQLP 188
>gi|451855208|gb|EMD68500.1| hypothetical protein COCSADRAFT_81386 [Cochliobolus sativus ND90Pr]
Length = 276
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 6/196 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + G+++AAD + G + K+ E++ I +G +D +
Sbjct: 28 TGTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHFIAPQIWCAGAGTAADTE----- 82
Query: 86 LDELILYDNMWDDGNSLGPK-ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
I+ N+ S G K + + +T + + + LV+ GV +L V
Sbjct: 83 FTTAIISSNLELHALSTGRKPRVVTCMTMLKQHLFRHQGHIGAYLVVAGVDPTGAHLFTV 142
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + +V G G+ A + +W +L+ ++ V L + ++ D + + +
Sbjct: 143 HAHGSTDKLPYVTMGSGSLAAMSVFETQWKAHLTRDEAVTLCANAIEAGIWNDLGSGSNV 202
Query: 205 QIAKITEEGTTISQPY 220
+A ITEE TT+ + Y
Sbjct: 203 DVAVITEEKTTLMRNY 218
>gi|256084599|ref|XP_002578515.1| proteasome catalytic subunit 2 (T01 family) [Schistosoma mansoni]
gi|360045416|emb|CCD82964.1| proteasome catalytic subunit 2 (T01 family) [Schistosoma mansoni]
Length = 281
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 99/215 (46%), Gaps = 9/215 (4%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++ + +K+G+++ AD + G+ + K+ +I I ++ +G +D Q +
Sbjct: 37 TGTTICGVVFKNGVVLGADTRATEGTVVAEKNCSKIHRISENIYCCGAGTAADTQMVTLM 96
Query: 86 LDELI-LYD-NMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
+ + L+ N + P L L R +Y + + +LVLGGV + +L
Sbjct: 97 ISSQVELHSLNTGRTPRVIAPLRL---LKRYLYQYQGY---VGAALVLGGVDSTGPHLYS 150
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
++ G + ++ G G+ +L + ++ ++ VKL+ + ++ D + +
Sbjct: 151 IAPHGSTDKLPYITMGSGSLACMSVLESRFKFDMEQDEAVKLVRDGIAAGIFNDMGSGSN 210
Query: 204 LQIAKITEEGTTISQPYALKTFWGFTAFQ-NPTAG 237
+ I IT++GTT + Y G A + NP G
Sbjct: 211 VDICIITKDGTTYIRSYDEANVKGKRAEKYNPPEG 245
>gi|217072416|gb|ACJ84568.1| unknown [Medicago truncatula]
Length = 271
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V L ++DGI++ AD + G + K+ E+I + + +G +D E + +
Sbjct: 37 TGTTIVGLVFQDGIILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAAD-TEAVTD 95
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G + L R ++N + + +LVLGGV +L +
Sbjct: 96 MVSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGH---VSAALVLGGVDITGPHLHTIY 152
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G G G+ A + ++ E+LS ++GVKL+ + + ++ D + + +
Sbjct: 153 PHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVAESICAGIFNDLGSGSNVD 212
Query: 206 IAKITE 211
+ IT+
Sbjct: 213 VCVITK 218
>gi|389608763|dbj|BAM17993.1| proteasome beta2 subunit [Papilio xuthus]
Length = 281
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 84/188 (44%), Gaps = 4/188 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + Y DG+++ AD + + + K+ ++I + + +G +D + +
Sbjct: 38 TGTTIVGIIYADGVILGADTRATENTVVSDKNCQKIHYLASNMYCCGAGTAADTEMTTQT 97
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ + + G ++ P E S L + M R + + +LVLGGV ++ +
Sbjct: 98 VASQLELQRL-HTGRTV-PVETASTLLKRMLFRYQGY--IGAALVLGGVDRTGPHIYCIY 153
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G + + G G+ A + W NLS E+G KL+ + ++ D + + +
Sbjct: 154 PHGSVDKLPYATMGSGSLAAMAVFESGWKPNLSEEEGKKLVRDAIAAGIFNDLGSGSNVD 213
Query: 206 IAKITEEG 213
+ I G
Sbjct: 214 LCVIRNSG 221
>gi|391869206|gb|EIT78408.1| 20S proteasome, regulatory subunit beta type PSMB2/PRE1
[Aspergillus oryzae 3.042]
Length = 203
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 3/181 (1%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNM 95
KD +L+AA G T+ ++ + + KHSL+ SGE D + + I M
Sbjct: 10 KDFVLVAASKAAMRGPTVLKAEDDKTRQLNKHSLMAFSGEAGDTVQFAEYIQANIQLYTM 69
Query: 96 WDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK--NGQKYLGMVSMIGVNFED 153
+D LGP + +++ + P +L+L GV + +L + +
Sbjct: 70 RND-TELGPNAVANFVRGELARSLRSRSPYTVNLLLAGVDGITQKPHLYWIDYLASLAPV 128
Query: 154 SHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEG 213
+ A G+ + L + H ++S E+G+KLLE C L R + + +T++G
Sbjct: 129 PYAAHGYAQYYCLSTLDNHHHPDISLEEGLKLLEMCTDELKRRLPIDYKGVLVKVVTKDG 188
Query: 214 T 214
Sbjct: 189 V 189
>gi|126304880|ref|XP_001373799.1| PREDICTED: proteasome subunit beta type-10-like [Monodelphis
domestica]
Length = 273
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 10/207 (4%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++ L +++G+++ +D + S + K+ E+I I + +G +D +
Sbjct: 38 TGTTIAGLVFQEGVILGSDTRATEDSVVADKNCEKIHFIAPNIYCCGAGVAADAE----- 92
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFD-PLWNSLVLGGVKNGQKYLGMV 144
+ IL NM S K + +TR++ ++ + SL++GG+ +L V
Sbjct: 93 MTTQILASNMELHALSTNRKPRVATVTRMLRQMLFRYQGHIGASLIIGGMDVTGPHLYSV 152
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G A G G A +L D + N++ E+G KL+ + + + D + + +
Sbjct: 153 HPHGSYSHILFTAMGSGQGPAISVLEDRFKPNMTLEEGQKLVVEAVTAGILEDLGSGSNV 212
Query: 205 QIAKITEEGT----TISQPYALKTFWG 227
+ IT++G +S P L G
Sbjct: 213 DVCVITQDGAKFQRAVSTPAVLSKRQG 239
>gi|171184537|ref|YP_001793456.1| proteasome endopeptidase complex protein [Pyrobaculum neutrophilum
V24Sta]
gi|302595728|sp|B1YA36.1|PSB1_THENV RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|170933749|gb|ACB39010.1| Proteasome endopeptidase complex [Pyrobaculum neutrophilum V24Sta]
Length = 201
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 90/185 (48%), Gaps = 4/185 (2%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLD 87
T+ V + ++G+++A D + G I +K E+I I H SG ++D Q +L L
Sbjct: 2 TTTVGIAVREGVVLATDKRVTAGYYIAHKQGEKIWKIDDHVAATMSGGVADLQSVLSFL- 60
Query: 88 ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQ-KYLGMVSM 146
L + + + + L +Y++ +++ R + + ++GGV + + L M
Sbjct: 61 TLRAREYKMEYKRPIPIRALVNYVSLILFYSRPYIYIVHS--IIGGVDDEEGAVLYMADW 118
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
+G ++ ++ATG G+ A+ L + E++S ED V L K ++ + D + + +
Sbjct: 119 LGTVTKERYIATGSGSPYAKGALEVGYREDMSLEDAVDLAIKAVKAAIRNDPGSGEGIDV 178
Query: 207 AKITE 211
IT+
Sbjct: 179 VVITK 183
>gi|62858119|ref|NP_001016503.1| proteasome beta 3 subunit [Xenopus (Silurana) tropicalis]
gi|163916422|gb|AAI57195.1| proteasome (prosome, macropain) subunit, beta type 3 [Xenopus
(Silurana) tropicalis]
Length = 205
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 10/185 (5%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G +++A++ KD + +AAD + + ++I P+G +G +G +D Q + + L
Sbjct: 8 GGAIMAMRGKDCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRL 67
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV--KNGQKYLGM 143
L LY+ +G + PK S + ++Y RR F P + V+ G+ K + ++
Sbjct: 68 KFRLNLYE--LKEGRQIKPKTFMSMVANLLYERR--FGPYYIEPVIAGLDPKTFKPFICS 123
Query: 144 VSMIGVNFE-DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ +IG E + V +G + + W ++ ED + + + M L DR AV+
Sbjct: 124 LDLIGCPMETEDFVVSGTCSEQMYGMCESLWEPDMEPEDLFETISQAM--LNAVDRDAVS 181
Query: 203 KLQIA 207
+ +
Sbjct: 182 GMGVV 186
>gi|225192933|dbj|BAH29708.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E KL+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVLYLAMGSGDLAALGILEDGFQHDLELEKAKKLVRDAVHSGIMN 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTF 225
D + N + I IT EG +P+ F
Sbjct: 198 DLGSGNNIDICVITAEGVDYIRPFQESEF 226
>gi|389583316|dbj|GAB66051.1| 20S proteasome beta subunit, partial [Plasmodium cynomolgi strain
B]
Length = 268
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 13 PNDPIQRTQ------LPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGK 66
P + I+ T+ + GT+ +A K+KDGI++A D S GS I ++VE+I I K
Sbjct: 39 PRNFIKDTKTKNNKLFDFHKGTTTLAFKFKDGIIVAVDSRASMGSFISSQNVEKIIEINK 98
Query: 67 HSLLGASGEISDFQELLRNLDELI-LYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPL 125
+ L +G +D + L ++I +Y+ + + + + L+ ++Y + L
Sbjct: 99 NILGTMAGGAADCLYWEKYLGKIIKIYE--LRNNEKISVRAASTILSNILYQYKGY--GL 154
Query: 126 WNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKL 185
++L G + + + G E + + G G+ A IL + NL+ E V+L
Sbjct: 155 CCGIILSGYDHTGFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLNLEQAVEL 214
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEG 213
+ +RD + K+++ I + G
Sbjct: 215 ARNAIYHATFRDGGSGGKVRVFYIHKNG 242
>gi|393214846|gb|EJD00338.1| proteasome subunit [Fomitiporia mediterranea MF3/22]
Length = 276
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 10/198 (5%)
Query: 21 QLPYVT--GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
QLP T GT++V +KDG+++ AD + G + K+ E+I I ++ +G +D
Sbjct: 29 QLPKATSTGTTIVGCIFKDGVVLGADTRATAGKIVEDKNCEKIHYITENIRCCGAGTAAD 88
Query: 79 FQELLRNLDELILYDNMWDDGNSLG--PKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ ++ NM S G P+ + + Y R + + +LVLGGV +
Sbjct: 89 TE-----FTTAMISSNMELHALSTGRTPRVVTAMTMLKQYLFRYQ-GYVSAALVLGGVDS 142
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V+ G + +V G G+ A + W N+S ++ + L+ + ++
Sbjct: 143 TGPHLFTVAPHGSTDKLPYVTMGSGSLAAMSVFESSWKPNMSRQEALSLVVAAISAGIFN 202
Query: 197 DRSAVNKLQIAKITEEGT 214
D + + + IT + T
Sbjct: 203 DLGSGSNVDACVITADHT 220
>gi|159469772|ref|XP_001693037.1| 20S proteasome beta subunit A2 [Chlamydomonas reinhardtii]
gi|158277839|gb|EDP03606.1| 20S proteasome beta subunit A2 [Chlamydomonas reinhardtii]
Length = 241
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 94/203 (46%), Gaps = 5/203 (2%)
Query: 18 QRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEIS 77
+ P TGT++VA YK G+++ AD S G+ I ++ +I P+ ++ L SG
Sbjct: 8 SHAEAPPSTGTTIVACTYKGGVVLGADGRVSIGNYIMNRASNKIAPLAEYIFLCRSGSAP 67
Query: 78 DFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG 137
D Q + N+ + D + + E+ + L +++ N NK + L+ G ++G
Sbjct: 68 DTQVISDNVKHYL--DQISAESGEEPSVEMAANLVKLI-NYNNKDHLVGAMLIAGWDRHG 124
Query: 138 QKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
+ + G ++ G G+ +E+ ++++ E+ K + + + + + RD
Sbjct: 125 GGQVYGAPIGGTLVKEKWAIDGSGSTYIWGYCDNEYRDDMTREEAEKWVAEAIALAMTRD 184
Query: 198 RSAVNKLQIAKITEEGTTISQPY 220
S+ +++ IT +GT Y
Sbjct: 185 SSSGGSIRL--ITLDGTGAHHKY 205
>gi|346466129|gb|AEO32909.1| hypothetical protein [Amblyomma maculatum]
Length = 304
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/195 (20%), Positives = 84/195 (43%), Gaps = 4/195 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++ + +KDG+++ AD + G + K+ ++I + + +G +D + +
Sbjct: 66 TGTTIAGIVFKDGVILGADTRATAGGFVADKNCDKIHYLAPNIYCCGAGTAADTVKTTKM 125
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ + + + P + + + M R + + +LVLGGV L +
Sbjct: 126 ISSQLELHRLAT--GRIVPVCTANRMLKQMLFRYQGY--ISAALVLGGVDTTGGVLCSIH 181
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G V G G+ A + +W ++S E+G KL+ + ++ D + + +
Sbjct: 182 PHGSTDRLPFVTMGSGSLAAMAVFERDWKPDMSLEEGKKLVRDAIAAGIFNDLGSGSNVD 241
Query: 206 IAKITEEGTTISQPY 220
+ IT G +PY
Sbjct: 242 LCVITRGGIAYLRPY 256
>gi|169773719|ref|XP_001821328.1| proteasome subunit beta type-2 [Aspergillus oryzae RIB40]
gi|238491732|ref|XP_002377103.1| proteasome component Pre1, putative [Aspergillus flavus NRRL3357]
gi|83769189|dbj|BAE59326.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697516|gb|EED53857.1| proteasome component Pre1, putative [Aspergillus flavus NRRL3357]
Length = 203
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 68/156 (43%), Gaps = 3/156 (1%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNM 95
KD +L+AA G TI ++ + + KHSL+ SGE D + + I M
Sbjct: 10 KDFVLVAASKAAMRGPTILKAEDDKTRQLNKHSLMAFSGEAGDTVQFAEYIQANIQLYTM 69
Query: 96 WDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK--NGQKYLGMVSMIGVNFED 153
+D LGP + +++ + P +L+L GV + +L + +
Sbjct: 70 RND-TELGPNAVANFVRGELARSLRSRSPYTVNLLLAGVDGITQKPHLYWIDYLASLAPV 128
Query: 154 SHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKC 189
+ A G+ + L H ++S E+G+KLLE C
Sbjct: 129 PYAAHGYAQYYCLSTLDKHHHPDISLEEGLKLLEMC 164
>gi|395508357|ref|XP_003758479.1| PREDICTED: proteasome subunit beta type-10 [Sarcophilus harrisii]
Length = 273
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 87/194 (44%), Gaps = 6/194 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++ L ++DG+++ AD + S + K+ E+I I + +G +D +
Sbjct: 38 TGTTIAGLVFQDGVILGADTRATNDSVVADKNCEKIHFIAPNIYCCGAGVAADAE----- 92
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFD-PLWNSLVLGGVKNGQKYLGMV 144
+ ++ NM S G K +TR++ ++ + SL++GGV L V
Sbjct: 93 MTTQMMASNMELHALSTGRKPRVVTVTRMLRQMLFRYQGHIGASLIVGGVDITGPLLYSV 152
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G A G G A +L D + N++ E+G +L+ + + + D + + +
Sbjct: 153 HPHGSYSRLLFTALGSGQEAAISVLEDRFKPNMTLEEGQQLIVEAVTAGILDDLGSGSNV 212
Query: 205 QIAKITEEGTTISQ 218
+ IT+ G I +
Sbjct: 213 DMCVITQAGAKIQR 226
>gi|402218035|gb|EJT98113.1| 20S proteasome subunit [Dacryopinax sp. DJM-731 SS1]
Length = 275
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 88/199 (44%), Gaps = 8/199 (4%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V Y DGI++ AD + G + K+ E+I I + +G +D +
Sbjct: 35 TGTTIVGCVYADGIVLGADTRATEGPIVADKNCEKIHYITDNIRCCGAGTAADTE----- 89
Query: 86 LDELILYDNMWDDGNSLG--PKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
++ NM S G P+ + + Y R + + +LVLGGV L
Sbjct: 90 YTTAMISSNMALHALSTGRQPRVVTAMTMLKQYLFRYQ-GHVGAALVLGGVDPTGPQLYT 148
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+ G + +V G G+ A + W N++ E+ V+L+ + ++ D + +
Sbjct: 149 IHPHGSTDKLPYVTMGSGSLAAMAVFESSWRANMTREEAVQLVAAAISAGIFNDLGSGSN 208
Query: 204 LQIAKITEEGTTISQPYAL 222
+ + +T++ T + + Y +
Sbjct: 209 VDVCIVTKDKTEMLRNYEM 227
>gi|229367758|gb|ACQ58859.1| Proteasome subunit beta type-7 precursor [Anoplopoma fimbria]
Length = 268
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/209 (21%), Positives = 90/209 (43%), Gaps = 8/209 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 32 QTPKPPKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYIAPNIYCCGAGTAAD 91
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
++ L + ++ + P+ + + L +Y + + +L+LGGV
Sbjct: 92 TEKTTELLSSNL---TIFSLNSGRNPRVVMAVNILQDTLYRYHGQ---IGANLILGGVDC 145
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L + +L+ + +
Sbjct: 146 TGNHLYTVGPYGSVNKTPYLAMGSGDLAALGILEDGYKPDLELDKAKELVRVAIHAGIMN 205
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTF 225
D + N + I IT EG +PY + +
Sbjct: 206 DLGSGNNIDICVITREGVDYIRPYQVSEY 234
>gi|221508035|gb|EEE33622.1| proteasome component PRE3 precursor / proteasome subunit beta type
6 precursor, putative [Toxoplasma gondii VEG]
Length = 245
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 87/191 (45%), Gaps = 9/191 (4%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++VA+ +K G+++ AD S GS + ++ +I + + + SG +D Q + +
Sbjct: 44 TGTTIVAVSFKGGVVLGADTRTSAGSYVVNRAARKISRVHERICVCRSGSAADTQAVTQI 103
Query: 86 LDELI-LYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG---VKNGQKYL 141
+ I Y G + + + Y + D L L++ G VK GQ Y
Sbjct: 104 VKLYIQQYAQELPKGEEPRVEAAANVFQSLCYQHK---DALTAGLIVAGFDKVKGGQIY- 159
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+ + G + A G G+ + + +N++ ++ V L++ + + RD S+
Sbjct: 160 -ALPLGGALVPMQYTAGGSGSAFISAYMDANFKQNMTQQEAVNLVKNSVAYAISRDGSSG 218
Query: 202 NKLQIAKITEE 212
+++ ITE+
Sbjct: 219 GMVRVVVITED 229
>gi|341897914|gb|EGT53849.1| CBN-PBS-1 protein [Caenorhabditis brenneri]
Length = 239
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 25/220 (11%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR- 84
TGT+++A++Y G+++ D S GS I ++ +I PI ++ ++ SG +D Q +
Sbjct: 22 TGTTLIAMEYNGGVVVGTDSRTSAGSFITSRATNKITPITENMVVCRSGSAADTQAIADI 81
Query: 85 ---NLDELILYDNMWDDGNSLGPKELH---SYLTRVMYNRRNKFDPLWNSLVLGGVK--- 135
++D + +N P ++ + +YN R + L S+++ G
Sbjct: 82 AKYHIDVYTMTENK--------PVTIYRSSQIFRQFLYNYREQ---LSASVLVAGWDAEL 130
Query: 136 NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLY 195
GQ Y + + G A+G G+ + L +W +L+ ++ ++++ + + +
Sbjct: 131 GGQVY--AIPIGGFVSRQRSTASGSGSTFVQGFLDSQWRPDLTLDECKAIVKQAVGLATF 188
Query: 196 RDRSAVNKLQIAKITEEGTTISQPYALKTFWGFTAFQNPT 235
RD S+ +++A I + G+ K GF Q PT
Sbjct: 189 RDGSSGGVVRLAVIDKTGSKFELFRPDKP--GFPFVQTPT 226
>gi|225193073|dbj|BAH29678.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|444319602|ref|XP_004180458.1| hypothetical protein TBLA_0D04430 [Tetrapisispora blattae CBS 6284]
gi|387513500|emb|CCH60939.1| hypothetical protein TBLA_0D04430 [Tetrapisispora blattae CBS 6284]
Length = 195
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 82/173 (47%), Gaps = 11/173 (6%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD---FQELLR-N 85
++ ++ +D ++MA + G ++ + ++ + + HSL+ SGE D F E ++ N
Sbjct: 4 ILGIRVQDCVIMATSKAVTRGISVLKDTDDKTRQLSPHSLMAFSGEAGDTVNFAEYIQAN 63
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQK--YLGM 143
+ + +N N L P+ + S++ + + P ++++GG + K L
Sbjct: 64 VQLYTIREN-----NELSPQAVSSFVRKELAKSIRSRKPYQVNVLIGGYDSTSKKPQLYQ 118
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+ +G E + A G+ +L + +++ E+G+ LL+KC+ L R
Sbjct: 119 IDYLGTKVELPYAAHGYSGFYTFSLLDHHYRPDMTKEEGLDLLKKCIEELQKR 171
>gi|396482507|ref|XP_003841478.1| similar to proteasome subunit beta type 7 precursor [Leptosphaeria
maculans JN3]
gi|312218053|emb|CBX97999.1| similar to proteasome subunit beta type 7 precursor [Leptosphaeria
maculans JN3]
Length = 276
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 84/196 (42%), Gaps = 6/196 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + G+++AAD + G + K+ E++ I +G +D +
Sbjct: 28 TGTTIVGCLFDGGVVIAADTRATSGPIVADKNCEKLHFISPQIWCAGAGTAADTE----- 82
Query: 86 LDELILYDNMWDDGNSLGPK-ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
I+ N+ S G K + + +T + + + LV+ G +L V
Sbjct: 83 FTTAIISSNLELHALSTGRKPRVVTCMTMLKQHLFRHQGHIGAYLVVAGCDPTGAHLFTV 142
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + +V G G+ A + +W +S ED V L + ++ D + + +
Sbjct: 143 HAHGSTDKLPYVTMGSGSLAAMSVFETQWKGEMSREDAVTLCANAIEAGIWNDLGSGSNV 202
Query: 205 QIAKITEEGTTISQPY 220
+A IT+E TT+ + Y
Sbjct: 203 DVAVITQEKTTLMRNY 218
>gi|448301508|ref|ZP_21491501.1| proteasome endopeptidase complex subunit beta [Natronorubrum
tibetense GA33]
gi|445584244|gb|ELY38568.1| proteasome endopeptidase complex subunit beta [Natronorubrum
tibetense GA33]
Length = 243
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 83/184 (45%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P G +L+G+ G F LR E+ LY
Sbjct: 58 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTGALTLVGSVGGAQSFISSLRA--EVNLY 115
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ G + L + + R F + +LGGV + ++ + G +
Sbjct: 116 EARR--GEDMSIDALATLAGN--FARGGPFFAIHP--ILGGVDDEGSHVYSIDPAGGVMK 169
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA L + + LS ++ + + ++ RD + N + + +IT+E
Sbjct: 170 DDYTVTGSGMQLAYGHLEQAYEDGLSNDEAKTIAARSIKSAAERDTGSGNGVFLCEITDE 229
Query: 213 GTTI 216
G I
Sbjct: 230 GVDI 233
>gi|82752963|ref|XP_727486.1| proteosome PSMB5/8 protein [Plasmodium yoelii yoelii 17XNL]
gi|23483352|gb|EAA19051.1| proteosome PSMB5/8 protein [Plasmodium yoelii yoelii]
Length = 287
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 95/208 (45%), Gaps = 11/208 (5%)
Query: 13 PNDPIQRTQ------LPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGK 66
P D I+ + + GT+ +A K+K+GI++A D S GS I ++VE+I I K
Sbjct: 39 PRDFIKYAKTENKKLFDFHKGTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINK 98
Query: 67 HSLLGASGEISDFQELLRNLDELI-LYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPL 125
+ L +G +D + L ++I +Y+ + + + + L+ ++Y + L
Sbjct: 99 YILGTMAGGAADCFYWEKYLGQIIKIYE--LRNNEKISVRAASTILSNILYQYKGY--GL 154
Query: 126 WNSLVLGGVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKL 185
++L G + + + G E + + G G+ A IL + NLS E V+L
Sbjct: 155 CCGIILSGYDHTGFNMFYIDDEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLSVEQAVEL 214
Query: 186 LEKCMRVLLYRDRSAVNKLQIAKITEEG 213
+ +RD + K+++ I + G
Sbjct: 215 GRNAIYHATFRDGGSGGKVRVFYIHKNG 242
>gi|448373810|ref|ZP_21557780.1| proteasome endopeptidase complex, beta subunit [Halovivax asiaticus
JCM 14624]
gi|445661181|gb|ELZ13973.1| proteasome endopeptidase complex, beta subunit [Halovivax asiaticus
JCM 14624]
Length = 242
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE+I P +L+G+ G F LR E+ LY
Sbjct: 57 DGVVIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFISNLRA--EVNLY 114
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ +G + L + + R F + +LGGV + ++ + G E
Sbjct: 115 EAR--NGEDMSIDALATLAGN--FARGGPFFAIHP--ILGGVDDEGSHVYSIDPAGGVME 168
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G LA L + + LS ++ + + + ++ + RD + N + + +IT++
Sbjct: 169 DDYTVTGSGMQLAYGHLEQSYEDGLSNDEAMTIAARGIKSAVERDTGSGNGIFLCEITDD 228
Query: 213 GTTI 216
G I
Sbjct: 229 GVDI 232
>gi|225192954|dbj|BAH29696.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLQLEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|156096783|ref|XP_001614425.1| 20S proteasome beta subunit [Plasmodium vivax Sal-1]
gi|148803299|gb|EDL44698.1| 20S proteasome beta subunit, putative [Plasmodium vivax]
Length = 273
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ +A K+K+GI++A D S GS I ++VE+I I K+ L +G +D + L
Sbjct: 62 GTTTLAFKFKEGIIVAVDSRASMGSFISSQNVEKIIEINKNILGTMAGGAADCLYWEKYL 121
Query: 87 DELI-LYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
++I +Y+ + + + + L+ ++Y + L ++L G + + +
Sbjct: 122 GKIIKIYE--LRNNEKISVRAASTILSNILYQYKGY--GLCCGIILSGYDHTGFNMFYID 177
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G E + + G G+ A IL + NLS E V+L + +RD + K++
Sbjct: 178 DEGKKVEGNLFSCGSGSTYAYSILDSAYDYNLSLEQAVELARNAIYHATFRDGGSGGKVR 237
Query: 206 IAKITEEG 213
+ I + G
Sbjct: 238 VFYIHKNG 245
>gi|225192986|dbj|BAH29620.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225192992|dbj|BAH29624.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|225192948|dbj|BAH29698.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193022|dbj|BAH29644.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193031|dbj|BAH29650.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193061|dbj|BAH29670.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|448667023|ref|ZP_21685668.1| proteasome subunit alpha [Haloarcula amylolytica JCM 13557]
gi|445772154|gb|EMA23210.1| proteasome subunit alpha [Haloarcula amylolytica JCM 13557]
Length = 237
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
+G+++A DM GG + S + VE+I P +L+G+ G F LR E+ LY
Sbjct: 53 EGVVIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFIRTLRA--EVNLY 110
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ G + K L + + R F + +LGGV + ++ + G +
Sbjct: 111 EARR--GEDISMKALSTLAGN--FARGGPF--FAINPILGGVDDDGHHVYSIDPAGGVMK 164
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G +A L D + E+++ E+ ++ + RD + N + +A +T E
Sbjct: 165 DDYTVTGSGLTVAYGTLEDRYEEDMTNEEAKEVAAASINAAAERDTGSGNGIYLADVTAE 224
Query: 213 GTTIS 217
G I+
Sbjct: 225 GVDIN 229
>gi|305662490|ref|YP_003858778.1| proteasome endopeptidase complex subunit beta [Ignisphaera
aggregans DSM 17230]
gi|304377059|gb|ADM26898.1| proteasome endopeptidase complex, beta component [Ignisphaera
aggregans DSM 17230]
Length = 236
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 6/173 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V + KD +++AAD + G + +K+V++I + ++S + +G ++D Q L +
Sbjct: 31 GTTTVGMALKDFVVLAADKKATAGLYVAHKNVKKIVRLTENSAITIAGLVADAQTLADYI 90
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK--NGQKYLGMV 144
Y + + + + + S L ++ K+ P L+LGG G K L +
Sbjct: 91 RAEAYY-YYYINNRPMSIRSMASLLGLIL--NEYKYFPFIVQLILGGYDYYEGAK-LFSI 146
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRD 197
G E+ + ATG G+ +A ++ + +S +D V L+ K + RD
Sbjct: 147 DYFGDVTEERYTATGSGSPIAIGVIESGYRPEMSIDDAVSLVVKAVATASMRD 199
>gi|225192977|dbj|BAH29682.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193013|dbj|BAH29638.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193034|dbj|BAH29652.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193037|dbj|BAH29654.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193040|dbj|BAH29656.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193049|dbj|BAH29662.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193064|dbj|BAH29672.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193067|dbj|BAH29674.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|225192971|dbj|BAH29686.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|55377332|ref|YP_135182.1| proteasome subunit alpha [Haloarcula marismortui ATCC 43049]
gi|448640122|ref|ZP_21677270.1| proteasome subunit alpha [Haloarcula sinaiiensis ATCC 33800]
gi|448657087|ref|ZP_21682626.1| proteasome subunit alpha [Haloarcula californiae ATCC 33799]
gi|74553042|sp|Q5V4S6.1|PSB1_HALMA RecName: Full=Proteasome subunit beta 1; AltName: Full=20S
proteasome beta subunit 1; AltName: Full=Proteasome core
protein PsmB 1; Flags: Precursor
gi|55230057|gb|AAV45476.1| proteasome subunit alpha [Haloarcula marismortui ATCC 43049]
gi|445762649|gb|EMA13870.1| proteasome subunit alpha [Haloarcula sinaiiensis ATCC 33800]
gi|445763129|gb|EMA14333.1| proteasome subunit alpha [Haloarcula californiae ATCC 33799]
Length = 240
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
DG+++A DM GG + S + VE I P +L+G+ G F LR E+ LY
Sbjct: 56 DGVVIATDMRASLGGRFVSNKNVQKVEEIHPTAALTLVGSVGGAQSFIRTLRA--EVNLY 113
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ G + K L + + R F + +LGGV + ++ + G +
Sbjct: 114 EARR--GEDISMKALSTLAGN--FARGGPF--FAINPILGGVDDDGHHVYSIDPAGGVMK 167
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G +A L D + E+++ E+ ++ ++ RD + N + +A +T +
Sbjct: 168 DDYTVTGSGLTVAYGTLEDRYEEDMTNEEAKEVAAASIKAAAERDTGSGNGIYLADVTAD 227
Query: 213 GTTIS 217
G I+
Sbjct: 228 GVDIN 232
>gi|433590820|ref|YP_007280316.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Natrinema pellirubrum DSM 15624]
gi|448331774|ref|ZP_21521025.1| proteasome subunit alpha [Natrinema pellirubrum DSM 15624]
gi|448385293|ref|ZP_21563799.1| proteasome subunit alpha [Haloterrigena thermotolerans DSM 11522]
gi|433305600|gb|AGB31412.1| proteasome endopeptidase complex, archaeal, alpha subunit
[Natrinema pellirubrum DSM 15624]
gi|445628733|gb|ELY82036.1| proteasome subunit alpha [Natrinema pellirubrum DSM 15624]
gi|445656788|gb|ELZ09620.1| proteasome subunit alpha [Haloterrigena thermotolerans DSM 11522]
Length = 246
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 91/198 (45%), Gaps = 15/198 (7%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELL--- 83
GT+ V ++ DG+++AA+ S + SVE+I H + ++G ++D ++L+
Sbjct: 36 GTASVGVRTPDGVVLAANRQIS-SPLMERSSVEKIHKADDHVGVASAGHVADARQLIDLA 94
Query: 84 --RNLDELILYDNMWDDGNSLGPKELHSYLTRVM--YNRRNKFDPLWNSLVLGGVKNGQK 139
R E + Y G +G + L +T + Y + P +L++GGV++GQ
Sbjct: 95 RRRAQGEQLRY------GQDIGVETLTRSITDHIQEYTQTGGARPFGVALLVGGVEDGQP 148
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
L G ++E A G + + L +E+ E+L + G++L + +
Sbjct: 149 RLFETDPSGTDYEWQAAAVGGDRDVIQGYLEEEYREDLDIDAGIELAISALN-EPEEESV 207
Query: 200 AVNKLQIAKITEEGTTIS 217
A + +A IT E + S
Sbjct: 208 AAEAVDVATITTEDESFS 225
>gi|393233954|gb|EJD41521.1| proteasome component Pre1 [Auricularia delicata TFB-10046 SS5]
Length = 194
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 93/188 (49%), Gaps = 9/188 (4%)
Query: 32 ALKYKDGILMAADMGGSYGSTIRYKSVE-RIKPIGKHSLLGASGEISDFQELLRNLDE-L 89
AL K +L+AADM S S ++ K E ++KP+ H L+ SGE D + ++ L
Sbjct: 6 ALTGKGYVLIAADMT-SARSIVKMKHDEDKVKPLSPHLLMTYSGEPGDTVQFAEYVERNL 64
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMVSMI 147
LY + ++L P S++ R + + P +L++GG Q +L + +
Sbjct: 65 RLYQ--IRNHHALRPHSAASWIRRTLADSLRSRSPYSVNLLVGGYDTSEHQPHLYWIDYL 122
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHE-NLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
G A G+G++ A +L D +H + S E+G+++L++C+ + R + K ++
Sbjct: 123 GTMATVPFAAHGYGSYFALSLL-DRYHNPDASLEEGIEVLKRCIDEVQKRLIVGLGKFKV 181
Query: 207 AKITEEGT 214
+ ++G
Sbjct: 182 RVVDKDGV 189
>gi|225193001|dbj|BAH29630.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193016|dbj|BAH29640.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|225192995|dbj|BAH29626.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193043|dbj|BAH29658.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPMKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|387594237|gb|EIJ89261.1| hypothetical protein NEQG_00031 [Nematocida parisii ERTm3]
gi|387594984|gb|EIJ92611.1| hypothetical protein NEPG_02499 [Nematocida parisii ERTm1]
Length = 230
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/188 (19%), Positives = 91/188 (48%), Gaps = 3/188 (1%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+++A+KYKDG+++ AD S G+ + + +I + + G +D Q + +
Sbjct: 34 GTTIIAVKYKDGVILGADSRTSMGTYVSNRVTRKITKLIDNVYTCRCGSAADTQA-IADY 92
Query: 87 DELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSM 146
+ I+ ++ G K++ + +++++ ++ + ++ GV ++ + +
Sbjct: 93 AKRIMNTGIYCHGQKPLVKDVAVAIKKIVWDATDQ--GVTAGFIVAGVDETGGHVFTIPL 150
Query: 147 IGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQI 206
G E + G G+ + + E ++ E+ V+ ++K + +YRD S+ +++
Sbjct: 151 GGALIEQNWSIAGSGSAYISGLGDSTFKEEMTKEEAVEFVKKMVSHAMYRDNSSGGCVRM 210
Query: 207 AKITEEGT 214
+TE GT
Sbjct: 211 MIVTEAGT 218
>gi|448532264|ref|XP_003870391.1| Pre1 beta 4 subunit of the 20S proteasome [Candida orthopsilosis Co
90-125]
gi|380354746|emb|CCG24261.1| Pre1 beta 4 subunit of the 20S proteasome [Candida orthopsilosis]
Length = 194
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDEL 89
++ ++ D L+A + G +I + ++ + + H+L+ +GE D + +
Sbjct: 4 ILGIRVSDATLIATSKAATRGISILKDNDDKTRHLNAHNLIAFTGEAGDTIQFAEYVQAN 63
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMVSMI 147
I +M +D + PK SY+ + P + ++ G K + L + +
Sbjct: 64 IQLYSMREDDVEMSPKATASYVRNQLATSIRSRKPYQVNCLIAGYDTKTDKPSLNYIDYL 123
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
G E + A G+ A +L + ++++ +DG++L++ C++ L R
Sbjct: 124 GTQVELPYGAHGYAAFYAMSLLDKHYRKDMNIDDGLRLMDMCIKELQTR 172
>gi|225193007|dbj|BAH29634.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|427787733|gb|JAA59318.1| Putative 20s proteasome regulatory subunit beta type [Rhipicephalus
pulchellus]
Length = 278
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 94/201 (46%), Gaps = 5/201 (2%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
+D ++ ++ Y GT+ +A KYKDG+++AAD + G I ++V++I I K+ L +
Sbjct: 60 DDASRQIKIRYDKGTTTLAFKYKDGVVVAADSRATGGEYIGSQTVKKIIEINKYMLGTMA 119
Query: 74 GEISDFQELLRNLDELI-LYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
G +D R L E +Y+ + + L ++YN + L ++ G
Sbjct: 120 GGAADCVYWERVLAERCRIYE--LRNRERISVAAASKLLANILYNYKGMGLSL-GVMICG 176
Query: 133 GVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRV 192
K G L V G S + G G+ A IL + + ++S ED +L K +
Sbjct: 177 WDKRGPG-LYYVDNEGNRLSGSLYSCGSGSTYAYGILDNGYSYDMSDEDAFELARKAIFH 235
Query: 193 LLYRDRSAVNKLQIAKITEEG 213
+RD ++ +++ ++ E G
Sbjct: 236 ATFRDSASGGIVRVYRVKETG 256
>gi|195396599|ref|XP_002056918.1| GJ16628 [Drosophila virilis]
gi|194146685|gb|EDW62404.1| GJ16628 [Drosophila virilis]
Length = 304
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 82/191 (42%), Gaps = 10/191 (5%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGTS+V + Y++G+++ AD + G + K+ +I + H +G +D
Sbjct: 43 TGTSIVGIVYQNGVILGADTRATEGPIVSDKNCSKIHRLQDHIFCCGAGTAAD------- 95
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFD---PLWNSLVLGGVKNGQKYLG 142
+++ L + D + L + M RR F + +LV+GGV ++
Sbjct: 96 TEQMTLMTSAELDLHGLNTDRQVPVVCASMMLRRTLFRYQGHISAALVMGGVDKYGPHVN 155
Query: 143 MVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ G + + A G G A +L W +L + G +L+ + + ++ D + +
Sbjct: 156 CIHPYGSIDKLPYAAMGSGTLAAMAVLERGWSPSLDLDQGKQLVREAISAGVFNDLGSGS 215
Query: 203 KLQIAKITEEG 213
+ + IT G
Sbjct: 216 NIDLCVITPNG 226
>gi|357504055|ref|XP_003622316.1| Proteasome subunit beta type [Medicago truncatula]
gi|355497331|gb|AES78534.1| Proteasome subunit beta type [Medicago truncatula]
Length = 271
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V L ++DGI++ AD + G + K+ E+I + + +G +D E + +
Sbjct: 37 TGTTIVGLVFQDGIILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAAD-TEAVTD 95
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G + L R ++N + + +LVLGGV +L +
Sbjct: 96 MVSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGH---VSAALVLGGVDITGPHLHTIY 152
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G G G+ A + ++ E+LS ++GVKL+ + + ++ D + + +
Sbjct: 153 PHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVVESICAGIFNDLGSGSNVD 212
Query: 206 IAKITE 211
+ IT+
Sbjct: 213 VCVITK 218
>gi|225192963|dbj|BAH29690.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225192974|dbj|BAH29684.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225192980|dbj|BAH29680.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225192998|dbj|BAH29628.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193010|dbj|BAH29636.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193046|dbj|BAH29660.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|225193052|dbj|BAH29664.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPMKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|225192942|dbj|BAH29702.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|124802189|ref|XP_001347396.1| 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
gi|23494975|gb|AAN35309.1|AE014830_53 20S proteasome beta subunit, putative [Plasmodium falciparum 3D7]
Length = 271
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 89/188 (47%), Gaps = 5/188 (2%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ +A K+KDGI++A D S GS I ++VE+I I K+ L +G +D + L
Sbjct: 60 GTTTLAFKFKDGIIVAVDSRASMGSFISSQNVEKIIEINKNILGTMAGGAADCLYWEKYL 119
Query: 87 DELI-LYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
++I +Y+ + + + + L+ ++Y + L ++L G + + V
Sbjct: 120 GKIIKIYE--LRNNEKISVRAASTILSNILYQYKGY--GLCCGIILSGYDHTGFNMFYVD 175
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G E + + G G+ A IL + NL+ + V+L + +RD + K++
Sbjct: 176 DSGKKVEGNLFSCGSGSTYAYSILDSAYDYNLNLDQAVELARNAIYHATFRDGGSGGKVR 235
Query: 206 IAKITEEG 213
+ I + G
Sbjct: 236 VFHIHKNG 243
>gi|315518854|dbj|BAJ51755.1| proteasome subunit, beta type 10 [Oryzias celebensis]
gi|315518865|dbj|BAJ51762.1| proteasome subunit, beta type 10 [Oryzias matanensis]
Length = 261
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 91/209 (43%), Gaps = 8/209 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 19 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 78
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
Q + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 79 TQ---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 132
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E+ KL+ + +
Sbjct: 133 TGNHLYTVGPYGSVDKMPYLAMGSGDLAALGILEDGFKIDLELEEAKKLVRDAVHSGIMS 192
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTF 225
D + N + I IT +G +P+ F
Sbjct: 193 DLGSGNNIDICVITSKGVDYIRPFQESEF 221
>gi|225192968|dbj|BAH29688.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPMKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|448678335|ref|ZP_21689342.1| proteasome subunit alpha [Haloarcula argentinensis DSM 12282]
gi|445772322|gb|EMA23367.1| proteasome subunit alpha [Haloarcula argentinensis DSM 12282]
Length = 240
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
+G+++A DM GG + S + VE+I P +L+G+ G F LR E+ LY
Sbjct: 56 EGVVIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFIRTLRA--EVNLY 113
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ G + K L + + R F + +LGGV + ++ + G +
Sbjct: 114 EARR--GEDISMKALSTLAGN--FARGGPF--FAINPILGGVDDDGHHVYSIDPAGGVMK 167
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G +A L D + E+++ E+ ++ + RD + N + +A +T E
Sbjct: 168 DDYTVTGSGLTVAYGTLEDRYEEDMTNEEAKEVAAASINAAAERDTGSGNGIYLADVTAE 227
Query: 213 GTTIS 217
G I+
Sbjct: 228 GVDIN 232
>gi|58220851|dbj|BAB83847.2| PSMB10 [Oryzias latipes]
gi|295901496|dbj|BAJ07260.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|295901530|dbj|BAJ07282.1| proteasome subunit, beta type 10 [Oryzias latipes]
gi|295901532|dbj|BAJ07283.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 275
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 33 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 92
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 93 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 146
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 147 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 206
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 207 DLGSGNNIDICVITKQGVDYIRPF 230
>gi|224473833|gb|ACN49172.1| antigen processing proteasome-associated protein [Oryzias
luzonensis]
Length = 275
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 33 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 92
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 93 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 146
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 147 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 206
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 207 DLGSGNNIDICVITKQGVDYIRPF 230
>gi|448688757|ref|ZP_21694494.1| proteasome subunit alpha [Haloarcula japonica DSM 6131]
gi|445778627|gb|EMA29569.1| proteasome subunit alpha [Haloarcula japonica DSM 6131]
Length = 240
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 84/185 (45%), Gaps = 12/185 (6%)
Query: 37 DGILMAADM----GGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILY 92
+G+++A DM GG + S + VE+I P +L+G+ G F LR E+ LY
Sbjct: 56 EGVVIATDMRASLGGRFVSNKNVQKVEQIHPTAALTLVGSVGGAQSFIRTLRA--EVNLY 113
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGVNFE 152
+ G + K L + + R F + +LGGV + ++ + G +
Sbjct: 114 EARR--GEDISMKALSTLAGN--FARGGPF--FAINPILGGVDDDGHHVYSIDPAGGVMK 167
Query: 153 DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEE 212
D + TG G +A L D + E+++ E+ ++ + RD + N + +A +T E
Sbjct: 168 DDYTVTGSGLTVAYGTLEDRYEEDMTNEEAKEVAAASINAAAERDTGSGNGIYLADVTAE 227
Query: 213 GTTIS 217
G I+
Sbjct: 228 GVDIN 232
>gi|357504315|ref|XP_003622446.1| Proteasome subunit beta type [Medicago truncatula]
gi|124359794|gb|ABN06120.1| Peptidase T1A, proteasome beta-subunit [Medicago truncatula]
gi|355497461|gb|AES78664.1| Proteasome subunit beta type [Medicago truncatula]
Length = 271
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V L ++DGI++ AD + G + K+ E+I + + +G +D E + +
Sbjct: 37 TGTTIVGLVFQDGIILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAAD-TEAVTD 95
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G + L R ++N + + +LVLGGV +L +
Sbjct: 96 MVSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGH---VSAALVLGGVDITGPHLHTIY 152
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G G G+ A + ++ E+LS ++GVKL+ + + ++ D + + +
Sbjct: 153 PHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVVESICAGIFNDLGSGSNVD 212
Query: 206 IAKITE 211
+ IT+
Sbjct: 213 VCVITK 218
>gi|440635645|gb|ELR05564.1| proteasome subunit beta type-2 [Geomyces destructans 20631-21]
Length = 203
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 82/183 (44%), Gaps = 9/183 (4%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD---FQELLRNLDELILY 92
KD L+AA G+TI S ++ + + +H+L+ SGE D F E ++ +L
Sbjct: 10 KDFTLVAASKAAMRGATILKASDDKTRALNQHTLMAFSGEAGDTIQFAEYIQANAQLYSM 69
Query: 93 DNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVK--NGQKYLGMVSMIGVN 150
N D L P + +++ + + +P +L+LGGV G+ L + +
Sbjct: 70 RNQID----LSPSAVANFVRGQLASSLRSRNPYNVNLLLGGVDPITGKPSLYWLDYLASL 125
Query: 151 FEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKIT 210
+ + A G+ + IL H ++ +E G+K+L C L R + + IT
Sbjct: 126 AQLPYAAHGYAQYYCLSILDKHHHPDIDFEQGMKILRLCTDELKRRLPVDFKGMLVKVIT 185
Query: 211 EEG 213
++G
Sbjct: 186 KDG 188
>gi|429849695|gb|ELA25050.1| proteasome subunit beta type 7 precursor [Colletotrichum
gloeosporioides Nara gc5]
Length = 270
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 87/196 (44%), Gaps = 6/196 (3%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + G+++AAD + G + K+ E++ I +G +D +
Sbjct: 28 TGTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYIAPQIWCAGAGTAADTE----- 82
Query: 86 LDELILYDNMWDDGNSLGPK-ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
I+ N+ S G K + + +T + + + LV+ GV +L V
Sbjct: 83 FTTAIISSNLELHALSTGRKPRVVTCMTMLKQHLFQYQGHIGAYLVVAGVDPTGTHLFTV 142
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
G + +V G G+ A + +W L+ E+ VKL ++ ++ D + + +
Sbjct: 143 HAHGSTDKLPYVTMGSGSLAAMSVFETQWKPQLNEEEAVKLASDAIQAGIFNDLGSGSNV 202
Query: 205 QIAKITEEGTTISQPY 220
+A IT++ TT+ + +
Sbjct: 203 DVAVITKDKTTLKRGF 218
>gi|322708975|gb|EFZ00552.1| proteasome subunit beta type 7 precursor [Metarhizium anisopliae
ARSEF 23]
Length = 271
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 83/195 (42%), Gaps = 4/195 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V + G+++AAD + G + K+ E++ I +G +D E
Sbjct: 28 TGTTIVGCIFDGGVVIAADTRATSGPIVADKNCEKLHYISPQIWCAGAGTAAD-TEFTTA 86
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
L L + G + L + ++ + LV+ G +L V
Sbjct: 87 LISSQLELHSLSTGRKPRVVTCMTLLKQHLFRYQGYIGAY---LVVAGCDPTGTHLFTVH 143
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G + +V G G+ A + +W NL+ ED VKL + + ++ D + + +
Sbjct: 144 AHGSTDKLPYVTMGSGSLAAMSVFETQWKPNLTQEDAVKLASEAILAGIFNDLGSGSNVD 203
Query: 206 IAKITEEGTTISQPY 220
+A IT++ TT+ + Y
Sbjct: 204 VAIITKDKTTLKRNY 218
>gi|56754849|gb|AAW25607.1| SJCHGC06118 protein [Schistosoma japonicum]
gi|226471392|emb|CAX70777.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
gi|226489366|emb|CAX75827.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
gi|226489368|emb|CAX75828.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
gi|226489370|emb|CAX75829.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
gi|226489372|emb|CAX75830.1| proteasome (prosome, macropain) subunit, beta type, 7 [Schistosoma
japonicum]
Length = 281
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 95/215 (44%), Gaps = 9/215 (4%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++ + +K+GI++ AD + G+ + K+ +I I + +G +D Q +
Sbjct: 37 TGTTICGVVFKNGIVLGADTRATEGNIVAEKNCSKIHRIADNIYCCGAGTAADTQMVTLM 96
Query: 86 LDELILYD--NMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
+ + N + P L L R +Y + + +LVLGGV + +L
Sbjct: 97 ISSQVELHRLNTGRTPRVIAPLRL---LKRYLYQYQGY---VGAALVLGGVDSTGPHLFS 150
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
++ G + ++ G G+ +L + N+ ++ VKL+ + ++ D + +
Sbjct: 151 IAPHGSTDKLPYITMGSGSLACMSVLESRFKFNMEQDEAVKLVRDGIAAGIFNDMGSGSN 210
Query: 204 LQIAKITEEGTTISQPYALKTFWGFTAFQ-NPTAG 237
+ I IT++GT + Y G A + NP G
Sbjct: 211 VDICIITKDGTKYIRSYDEANVKGKRAEKYNPPEG 245
>gi|217074222|gb|ACJ85471.1| unknown [Medicago truncatula]
Length = 271
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 87/186 (46%), Gaps = 4/186 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V L ++DGI++ AD + G + K+ E+I + + +G +D E + +
Sbjct: 37 TGTTIVGLVFQDGIILGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAAD-TEAVTD 95
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ L + + G + L R ++N + + +LVLGGV +L +
Sbjct: 96 MVSSQLQLHRYHTGRESRVVTALTLLKRHLFNYQGH---VSAALVLGGVDITGPHLHAIY 152
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G G G+ A + ++ E+LS ++GVKL+ + + ++ D + + +
Sbjct: 153 PHGSTDTLPFATMGSGSLAAMSVFESKYKESLSRDEGVKLVVESICAGIFNDLGSGSNVD 212
Query: 206 IAKITE 211
+ IT+
Sbjct: 213 VCVITK 218
>gi|225192945|dbj|BAH29700.1| proteasome subunit, beta type 10 [Oryzias latipes]
Length = 266
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 24 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 83
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 84 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 137
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 138 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDRFKHDLELEKAKELVRDAIHAGIMS 197
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 198 DLGSGNNIDICVITKQGVDYIRPF 221
>gi|168046797|ref|XP_001775859.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672866|gb|EDQ59398.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 275
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 84/188 (44%), Gaps = 4/188 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++V L YKDG+++ AD + G + K+ E+I + + +G +D + +
Sbjct: 39 TGTTIVGLVYKDGVILGADTRATEGEIVCDKNCEKIHYLAPNIYCCGAGTAADTENVTDM 98
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ + +S + + LT + + + +LVLGGV +L +
Sbjct: 99 VSSQLALHRYATGRDS----RVVTALTMIKTHLFRYQGHVSAALVLGGVDVTGPHLHAIY 154
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G G G+ A + + ENL+ E+G++++ + ++ D + + +
Sbjct: 155 PHGSTDTLPFATMGSGSLAAMSVFESRYKENLTREEGMEIVSAAICAGIFNDLGSGSNVD 214
Query: 206 IAKITEEG 213
+ IT+EG
Sbjct: 215 LCIITKEG 222
>gi|448681224|ref|ZP_21691357.1| proteasome subunit alpha [Haloarcula argentinensis DSM 12282]
gi|445767757|gb|EMA18850.1| proteasome subunit alpha [Haloarcula argentinensis DSM 12282]
Length = 244
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V ++ +DG+++AAD + I S+E+I I H + ++G ++D ++L+
Sbjct: 35 GTASVGVRTEDGVVIAADR-HARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVA 93
Query: 87 DELILYDNM-WDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
+ + +D+ S+ KE+ Y+ + Y + P +L++ G+++G+ L
Sbjct: 94 RRQSQVNRLRYDEPASVESLTKEITDYIQQ--YTQTGGARPFGVALLVAGIEDGEPRLFE 151
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCM 190
G +E VA G + L +E+ E + E G++L + +
Sbjct: 152 TDPSGTPYEWQAVAIGGSREDIQSFLEEEYAEGMDLEGGIELALRAL 198
>gi|448637202|ref|ZP_21675578.1| proteasome subunit alpha [Haloarcula sinaiiensis ATCC 33800]
gi|445764749|gb|EMA15893.1| proteasome subunit alpha [Haloarcula sinaiiensis ATCC 33800]
Length = 244
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V ++ +DG+++AAD + I S+E+I I H + ++G ++D ++L+
Sbjct: 35 GTASVGVRTEDGVVIAADR-HARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVA 93
Query: 87 DELILYDNM-WDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
+ + +D+ S+ KE+ Y+ + Y + P +L++ G+++G+ L
Sbjct: 94 RRQSQVNRLRYDEPASVESLTKEITDYIQQ--YTQTGGARPFGVALLVAGIEDGEPRLFE 151
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCM 190
G +E VA G + L +E+ E + E G++L + +
Sbjct: 152 TDPSGTPYEWQAVAIGGSREDIQSFLEEEYAEGMDLEGGIELALRAL 198
>gi|326368273|ref|NP_001191916.1| proteasome subunit beta type-7 [Acyrthosiphon pisum]
Length = 270
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 19/193 (9%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLR------NLDEL 89
+D +++AAD + + + K+ E+I IGK+ +G +D ++ R +L
Sbjct: 48 RDCVILAADTRATSDTIVMEKNCEKIHYIGKYMHCCGAGTAADTMQVTRMVSANVSLQAF 107
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIGV 149
D M + + L YL + M + +L+LGG+ N +L + G
Sbjct: 108 KFPDEMVP--VAFAARSLRQYLFKYM-------GYVSAALILGGIDNSGAHLYSIYPHGS 158
Query: 150 NFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVL--LYRDRSAVNKLQIA 207
+ +++ G G+ A L W+ENL+ E+G+KL C +L ++ D + + + +
Sbjct: 159 IDKLPYISMGSGSMAAISELESRWNENLTEEEGMKL--ACDAILGGVFNDLGSGSNVDLC 216
Query: 208 KITEEGTTISQPY 220
I ++GT + + Y
Sbjct: 217 VIKKDGTRMLRNY 229
>gi|269860537|ref|XP_002649989.1| 20S proteasome core particle subunit beta 1 [Enterocytozoon
bieneusi H348]
gi|220066608|gb|EED44084.1| 20S proteasome core particle subunit beta 1 [Enterocytozoon
bieneusi H348]
Length = 206
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 84/188 (44%), Gaps = 13/188 (6%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL--- 82
TGT+++A KYKDGI+ AAD + G I ++I I ++ L SG S Q L
Sbjct: 9 TGTTILAFKYKDGIMFAADSRTTRGQFISCHYSDKITQISENVLCCRSGVSSHTQYLQRV 68
Query: 83 -LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYL 141
R +L + K+ + L ++Y + D L SL+LGG +G + +
Sbjct: 69 IARECQKLARLEQ-----TKFSIKKAANILGNIIYENK---DYLRASLILGGQDDGFE-I 119
Query: 142 GMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAV 201
+++ G G G+ + W N+ +D + + +R+ + RD ++
Sbjct: 120 YKIAIDGTVIPSDCAVAGSGSAFVYGYVDTYWKPNMELKDALDFAVQVVRLAINRDVASG 179
Query: 202 NKLQIAKI 209
+++A +
Sbjct: 180 GVVRVATL 187
>gi|348562309|ref|XP_003466953.1| PREDICTED: proteasome subunit beta type-3-like [Cavia porcellus]
Length = 202
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 10/184 (5%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G +V+A+K K+ + +AAD + + ++I P+G +G +G +D Q + + L
Sbjct: 5 GGAVMAMKGKNCVAIAADKRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRL 64
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV--KNGQKYLGM 143
L LY+ +G + P L S + ++Y RR F P + V+ G+ K Q ++
Sbjct: 65 KFRLNLYE--LKEGRQIKPYTLMSMVANLLYERR--FGPYYTEPVIAGLDPKTFQPFICS 120
Query: 144 VSMIGVNF-EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ +IG D V +G + W N+ E + + + M L DR AV+
Sbjct: 121 LDLIGCPMVTDDFVVSGTCAEQMYGMCESLWEPNMDPEHLFETISQAM--LNAVDRDAVS 178
Query: 203 KLQI 206
+ +
Sbjct: 179 GMGV 182
>gi|55378524|ref|YP_136374.1| proteasome subunit alpha [Haloarcula marismortui ATCC 43049]
gi|59798451|sp|Q5V1D4.1|PSA2_HALMA RecName: Full=Proteasome subunit alpha 2; AltName: Full=20S
proteasome alpha subunit 2; AltName: Full=Proteasome
core protein PsmA 2
gi|55231249|gb|AAV46668.1| proteasome alpha subunit [Haloarcula marismortui ATCC 43049]
Length = 244
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 82/167 (49%), Gaps = 6/167 (3%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
GT+ V ++ +DG+++AAD + I S+E+I I H + ++G ++D ++L+
Sbjct: 35 GTASVGVRTEDGVVIAADR-HARSPLIERDSIEKIHEIDSHVGVASAGHVADARQLIDVA 93
Query: 87 DELILYDNM-WDDGNSLGP--KELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
+ + +D+ S+ KE+ Y+ + Y + P +L++ G+++G+ L
Sbjct: 94 RRQSQVNRLRYDEPASVESLTKEITDYIQQ--YTQTGGARPFGVALLVAGIEDGEPRLFE 151
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCM 190
G +E VA G + L +E+ E + E G++L + +
Sbjct: 152 TDPSGTPYEWQAVAIGGSREDIQTFLEEEYAEGMDLEGGIELALRAL 198
>gi|320582204|gb|EFW96422.1| proteasome subunit [Ogataea parapolymorpha DL-1]
Length = 194
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/185 (18%), Positives = 88/185 (47%), Gaps = 2/185 (1%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDEL 89
++ ++ KD +++A + G ++ + ++ + + +++LL +GE D + +
Sbjct: 4 ILGIRVKDSVIVATSKAFTRGISVLKDTDDKTRVLNQYNLLAFTGESGDTTQFADYIQAN 63
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNG-QKYLGMVSMIG 148
I M ++ L K + S++ + + P ++LGG+ NG + +L ++ +G
Sbjct: 64 IQLFTMREN-TELNSKAIASFVRQQLATSIRSRTPYQVQVLLGGLHNGSEPFLSLIDYLG 122
Query: 149 VNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAK 208
+ + A G+ +L + +++ ++G+KLL+ C + L+ R L +
Sbjct: 123 TRVDLPYCAHGYAAFYTMSLLDHHYRPDMALDEGLKLLKLCHQELVKRMPIEFKGLYVKV 182
Query: 209 ITEEG 213
I ++G
Sbjct: 183 IDKDG 187
>gi|255723451|ref|XP_002546659.1| proteasome component C11 [Candida tropicalis MYA-3404]
gi|240130790|gb|EER30353.1| proteasome component C11 [Candida tropicalis MYA-3404]
Length = 194
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/169 (19%), Positives = 75/169 (44%), Gaps = 2/169 (1%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDEL 89
++ +K D ++A + G ++ + ++ + + H+L+ +GE D + +
Sbjct: 4 ILGIKVSDATIIATSKAATRGISVLKDTDDKTRHLNAHNLIAYTGEAGDTVQFAEYVQAN 63
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMVSMI 147
I +M ++ L PK S++ + P + ++GG VK + L + +
Sbjct: 64 IQLYSMRENDIELSPKATASFVRTQLATSLRSRKPYQVNCLIGGYDVKTNKPSLNWIDYL 123
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
G E + A G+ +L + + ++ E+G+KL++ C+ L R
Sbjct: 124 GTQVELPYGAHGYAAFYTTSLLDKHYRKEMTVEEGLKLMDMCVEELQRR 172
>gi|315518868|dbj|BAJ51764.1| proteasome subunit, beta type 10 [Oryzias matanensis]
Length = 261
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 90/204 (44%), Gaps = 8/204 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 19 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKMCAKIHYISPNIYCCGAGTAAD 78
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 79 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 132
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E +L+ + +
Sbjct: 133 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDAFKHDLELEKAKELVRDAIHAGIMS 192
Query: 197 DRSAVNKLQIAKITEEGTTISQPY 220
D + N + I IT++G +P+
Sbjct: 193 DLGSGNNIDICVITKQGVDYIRPF 216
>gi|387914628|gb|AFK10923.1| proteasome (prosome, macropain) subunit, beta type, 3
[Callorhinchus milii]
Length = 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 86/180 (47%), Gaps = 10/180 (5%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G +++A+K K+ + +A+D + + ++I P+G+ +G +G +D Q + + L
Sbjct: 8 GAAIMAMKGKNCVAIASDRRFGIQAQLVTTDFQKIYPMGERLYIGLAGLATDVQTVSQRL 67
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV--KNGQKYLGM 143
L LY+ +G + PK S ++ ++Y RR F P + V+ G+ K + ++
Sbjct: 68 KFRLNLYE--LKEGRQIKPKTFMSMVSNLLYERR--FGPYYVDPVIAGLHPKTFEPFICS 123
Query: 144 VSMIGVNFE-DSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ +IG E D V +G + + W +L E + + + M L DR A++
Sbjct: 124 LDVIGCPMETDDFVVSGTCSEQMYGMCESLWEPDLESEALFETISQAM--LNAVDRDAIS 181
>gi|412991418|emb|CCO16263.1| predicted protein [Bathycoccus prasinos]
Length = 241
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/214 (20%), Positives = 92/214 (42%), Gaps = 20/214 (9%)
Query: 16 PIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
P+ +P TGT+++A Y+ G+++AAD S G+ + ++ ++I I + + SG
Sbjct: 5 PVDFLSIPVSTGTTILACAYRTGVVLAADSRTSTGAYVANRASDKITQICDNVWMCRSGS 64
Query: 76 ISDFQELLRNLDELILYDNMWDDGNSLGPKE------------LHSYLTRVMYNRRNKFD 123
+D Q + + ++ M +G E + ++ Y + K
Sbjct: 65 AADTQNVAAYVKRMVEEHAMERNGTGFRENESNDRAMMVDVRVVAKLTQKIAYENKEK-- 122
Query: 124 PLWNSLVLGG---VKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYE 180
L +++ G V+ Q Y + + G E +G G+ L + + EN+ E
Sbjct: 123 -LQAGMIIAGWDRVRGPQVY--GIPLGGSMLEAPFSVSGSGSAYIYGYLDNTYKENMERE 179
Query: 181 DGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEGT 214
+ K + + + + + RD S+ +++ I E G
Sbjct: 180 ECEKWMTEAISLAIARDASSGGVIRLVTIHENGC 213
>gi|253746973|gb|EET01937.1| Proteasome subunit beta type 9 precursor [Giardia intestinalis ATCC
50581]
Length = 221
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%), Gaps = 8/208 (3%)
Query: 14 NDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGAS 73
N + P GT+++ +KY G+L++AD + G+ + + +I PI +
Sbjct: 12 NPTLTHVMPPLSLGTTIIVMKYAGGVLLSADTRATMGNLVVDRFTPKILPITDKIYTCIA 71
Query: 74 GEISDFQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKF-DPLWNSLVLG 132
G +S Q L+ + ++ M N G + + ++ +K+ + L + +LG
Sbjct: 72 GSVSHAQFLVNEVRAHLMTQQMDLHANLNGMDPMVATAANILSIYLHKYREFLHAAFILG 131
Query: 133 GVKNGQKYLGMVSMIGVN-FEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMR 191
GV N + + +MIG + E+ + +G G + ++++ + L+ + + L K +R
Sbjct: 132 GVDN-TGFHCINAMIGGSVLEEDYAISGSGGVFIKGLMKELYKPELTRAEAIDLACKLLR 190
Query: 192 VLLYRDRSAVNKLQIAKI-----TEEGT 214
+ D + ++ I EEGT
Sbjct: 191 TAISLDTKSGGFMRFVAIEQGGLAEEGT 218
>gi|225703584|gb|ACO07638.1| Proteasome subunit beta type 7 precursor [Oncorhynchus mykiss]
Length = 277
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 89/200 (44%), Gaps = 8/200 (4%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P TGT++ + K+G+++ AD + G + K +I I + +G +D ++
Sbjct: 39 PMKTGTTIAGVLCKNGVVLGADTRATSGEVVADKMCAKIHYISPNIYCCGAGTAADTEKT 98
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKNGQKY 140
L + +M N P+ + + L +++ R + + SL+LGGV +
Sbjct: 99 TDLLSSNLTIFSMNSGRN---PRVVMAVNILQDMLFRYRGQ---IGASLILGGVDCTGNH 152
Query: 141 LGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSA 200
L V G ++A G G+ A IL D + ++ E+ +L+ + + D +
Sbjct: 153 LYKVGPYGSIDNVPYLAMGSGDLAALGILEDRFKADMEMEEAKELVRDAIHSGIMSDLGS 212
Query: 201 VNKLQIAKITEEGTTISQPY 220
N + I IT++G +PY
Sbjct: 213 GNNIDICVITKQGVDYIRPY 232
>gi|332019508|gb|EGI59987.1| Proteasome subunit beta type-1 [Acromyrmex echinatior]
Length = 237
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 102/213 (47%), Gaps = 17/213 (7%)
Query: 23 PYV-TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQE 81
PY G SVVAL D ++AAD S G TI ++ +++ P+ ++LG SG D
Sbjct: 28 PYSDNGGSVVALAGDDFCVIAADTRLSTGFTIHTRNQDKLFPLSDTTILGCSGCWCDTTT 87
Query: 82 LLRNLD-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV-KNGQK 139
L R L + +Y + + + L+ ++Y++R F P + S +L G+ +NG+
Sbjct: 88 LTRLLSARMQMYKH--EHQKEMSTPATAQMLSIMLYHKR--FFPYYVSNILAGLDENGKG 143
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEW-HEN--------LSYEDGVKLLEKCM 190
+ IG + ++ A G L +P+L ++ ++N L+ E + +L+
Sbjct: 144 CIYSYDPIGHCEKTTYRAGGSAGALLQPLLDNQIGYKNQEGVTPAPLTQEKAIAILKDVF 203
Query: 191 RVLLYRDRSAVNKLQIAKITEEGTTISQPYALK 223
RD + + I IT++G IS +AL+
Sbjct: 204 TSAAERDIYTGDGITIKIITKDGIEISS-FALR 235
>gi|344229512|gb|EGV61397.1| N-terminal nucleophile aminohydrolase [Candida tenuis ATCC 10573]
Length = 194
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/169 (20%), Positives = 76/169 (44%), Gaps = 2/169 (1%)
Query: 30 VVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDEL 89
V+ ++ D ++A + G ++ + ++ + + H+L+ +GE D + +
Sbjct: 4 VLGIRLTDSTIIATSKAITRGISVLKDNDDKTRVLNAHNLVAFTGESGDTVQFAEYMQAN 63
Query: 90 ILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG--VKNGQKYLGMVSMI 147
I +M ++ L PK S++ + P +++LGG K+ + L + +
Sbjct: 64 IQLYSMRENDIELSPKATASFVRSQLATSIRSRKPYQVNVLLGGFDTKSNEPTLNYIDYL 123
Query: 148 GVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
G + A G+ +L + N++ +DG+KLL+ C+R L R
Sbjct: 124 GTQAVLPYAAHGYAAFYCMSLLDKHYRTNMTLDDGLKLLDMCIRELETR 172
>gi|300706947|ref|XP_002995703.1| hypothetical protein NCER_101331 [Nosema ceranae BRL01]
gi|239604901|gb|EEQ82032.1| hypothetical protein NCER_101331 [Nosema ceranae BRL01]
Length = 193
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 87/188 (46%), Gaps = 2/188 (1%)
Query: 29 SVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDE 88
S +ALK KD +++ D + + + + + G+ D + E
Sbjct: 3 SSIALKGKDFVIIGTDASIKNSYLVLKRDENKFINVNDRVIFTYLGDQGDAFRTASFVKE 62
Query: 89 LILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVSMIG 148
++Y+ + ++ + PK + + + +Y R + P+ N ++GG+ + L V + G
Sbjct: 63 KLIYEEIQNNV-EITPKVTANIIQKSIY-RSLRSRPIENYFLIGGLTDNGPELYSVDVYG 120
Query: 149 VNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAK 208
+E++ +A G + +L E+ E+++ + +++L KC VL R ++ + I
Sbjct: 121 SMYENNFMAVGIATYFCYGVLDKEYTEDINKDKAIEVLYKCFDVLKERCSVDISNIDIRI 180
Query: 209 ITEEGTTI 216
I++EG +
Sbjct: 181 ISKEGVEV 188
>gi|346466077|gb|AEO32883.1| hypothetical protein [Amblyomma maculatum]
Length = 314
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 83/195 (42%), Gaps = 4/195 (2%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT++ + +KDG+++ AD + G + K+ +I + + +G +D + R
Sbjct: 76 TGTTIAGIVFKDGVILGADTRATAGGFVADKNCNKIHYLAPNIYCCGAGTAADTVKTTRM 135
Query: 86 LDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMVS 145
+ + + + P + + + M R + + +LVLGGV L +
Sbjct: 136 ISSQLELHRLAT--GRIVPVCTANRMLKQMLFRYQGY--ISAALVLGGVDTTGGVLCSIH 191
Query: 146 MIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQ 205
G V G G+ A + +W ++S E+G KL+ + ++ D + + +
Sbjct: 192 PHGSTDRLPFVTMGSGSLAAMAVFERDWKPDMSLEEGKKLVRDAIAAGIFNDLGSGSNVD 251
Query: 206 IAKITEEGTTISQPY 220
+ IT G +PY
Sbjct: 252 LCVITRGGLAHVRPY 266
>gi|315518874|dbj|BAJ51768.1| proteasome subunit, beta type 10 [Oryzias marmoratus]
Length = 261
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 91/209 (43%), Gaps = 8/209 (3%)
Query: 19 RTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD 78
+T P TGT++ + +KDG+++ AD + + K +I I + +G +D
Sbjct: 19 QTPKPLKTGTTIAGVVFKDGVVLGADTRATSSEVVADKLCAKIHYISPNIYCCGAGTAAD 78
Query: 79 FQELLRNLDELILYDNMWDDGNSLGPKELHSY--LTRVMYNRRNKFDPLWNSLVLGGVKN 136
+ + D L ++ + P+ + + L ++Y + + +L+LGGV
Sbjct: 79 TE---KTTDLLSSNLTVFSLNSGRNPRVVMAVNILQDMLYRYHGQ---IGANLILGGVDC 132
Query: 137 GQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYR 196
+L V G + ++A G G+ A IL D + +L E+ KL+ + +
Sbjct: 133 TGNHLYTVGPYGSVNKVPYLAMGSGDLAALGILEDGFKHDLELEEAKKLVRDAVHSGIMS 192
Query: 197 DRSAVNKLQIAKITEEGTTISQPYALKTF 225
D + N + I IT +G +P+ F
Sbjct: 193 DLGSGNNIDICVITSKGVDYIRPFQESEF 221
>gi|219118411|ref|XP_002179979.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408236|gb|EEC48170.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 201
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/195 (21%), Positives = 87/195 (44%), Gaps = 16/195 (8%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQE---L 82
TGT++V L + G+++ AD + G+ + K+ E+I + + +G +D ++ L
Sbjct: 6 TGTTIVGLTFAGGVVLGADTRATGGTEVAEKNCEKIHYLAPNMYCCGAGTAADTEKTTAL 65
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLT---RVMYNRRNKFDPLWNSLVLGGVKNGQK 139
+ + EL+ D P + + T R+++ + +LVLGGV
Sbjct: 66 ISSQLELLRMDTH-------APSRVVTACTLLKRMLFRYQGHVSA---ALVLGGVDVHGP 115
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
++ + G + + G G+ A + W EN+ D V+L+++ + ++ D
Sbjct: 116 HVYQIYPHGSTSKLPYTTMGSGSLAAMSVFESSWKENMEEADAVRLVQRAIGAGIFNDLG 175
Query: 200 AVNKLQIAKITEEGT 214
+ + + I +GT
Sbjct: 176 SGSNCDVCIIRLDGT 190
>gi|396082339|gb|AFN83949.1| proteasome subunit beta type-6 [Encephalitozoon romaleae SJ-2008]
Length = 202
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 85/190 (44%), Gaps = 10/190 (5%)
Query: 26 TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRN 85
TGT+++A+KY G+L+ AD S G+ I + +++ I + SG +D Q +
Sbjct: 8 TGTTIIAIKYDGGVLIGADSRTSMGTYIPSRVTDKLTQITNKIFVCRSGSSADTQMISEY 67
Query: 86 LDELILYDNMWDDGNSLGPK--ELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGM 143
L +Y NM+ S P + ++++Y L L++ G + +
Sbjct: 68 LK---MYLNMYSRLESSVPSVHRAATLASKIIYEN----PTLLAGLIVAGYDDKPRVFN- 119
Query: 144 VSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNK 203
+S+ G E G G+ W +S E+G+K ++ + + RD ++
Sbjct: 120 ISLGGSLMECDWAIGGSGSAFIYGYCDMNWRSGMSLEEGIKFIKDAVSSAIRRDNASGGC 179
Query: 204 LQIAKITEEG 213
++++ I+ +G
Sbjct: 180 IRMSAISRDG 189
>gi|119501034|ref|XP_001267274.1| proteasome component Pre1, putative [Neosartorya fischeri NRRL 181]
gi|119415439|gb|EAW25377.1| proteasome component Pre1, putative [Neosartorya fischeri NRRL 181]
Length = 212
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 79/181 (43%), Gaps = 3/181 (1%)
Query: 36 KDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNLDELILYDNM 95
KD +++AA G TI ++ + + +H+L+ SGE D + + + M
Sbjct: 19 KDFVILAASKAAMRGPTILKAEDDKTRQLSQHTLMAFSGEAGDTVQFAEYIQANVALYTM 78
Query: 96 WDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKN--GQKYLGMVSMIGVNFED 153
+D L P + +++ + +P +L+LGGV + + +L + +
Sbjct: 79 RND-TELRPNAVANFVRGELARSLRSRNPYTVNLLLGGVDSITEEPHLYWIDYLSALARV 137
Query: 154 SHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEG 213
+ A G+ + IL H ++S E G+KLL+ C L R L + +T++G
Sbjct: 138 PYAAHGYAQYYCLSILDKHHHSDISLEQGMKLLQMCTDELKRRLPIDYKGLLVKVVTKDG 197
Query: 214 T 214
Sbjct: 198 V 198
>gi|168019333|ref|XP_001762199.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686603|gb|EDQ72991.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 275
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 12/201 (5%)
Query: 18 QRTQLPYV--TGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGE 75
Q +LP TGT++V L +KDG+++ AD + G + K+ E+I + + +G
Sbjct: 29 QGAKLPKFRKTGTTIVGLIFKDGVILGADTRATEGEIVCDKNCEKIHYLAPNISCCGAGT 88
Query: 76 ISDFQELLRNL-DELIL--YDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLG 132
+D + + + +L+L Y + L S+L R + +LVLG
Sbjct: 89 AADTENVTDMVSSQLVLHRYATGRESRVVTALTMLKSHLFRYQ-------GQVSAALVLG 141
Query: 133 GVKNGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRV 192
GV +L V G G G+ A + + ENL+ E+G++++ +
Sbjct: 142 GVDVTGPHLHAVYPHGSTDTLPFATMGSGSLAAMSVFESRYKENLTKEEGMEIVSAAICA 201
Query: 193 LLYRDRSAVNKLQIAKITEEG 213
++ D + + + + IT+EG
Sbjct: 202 GIFNDLGSGSNVDLCIITKEG 222
>gi|116780859|gb|ABK21850.1| unknown [Picea sitchensis]
Length = 233
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 86/196 (43%), Gaps = 9/196 (4%)
Query: 23 PYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQEL 82
P+ GT+++ + Y G ++ AD S G + ++ ++I + + L SG +D Q +
Sbjct: 9 PHSMGTTIIGVTYNGGTVLGADSRTSTGMYVANRASDKITQLTDNVYLCRSGSAADSQ-V 67
Query: 83 LRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGG---VKNGQK 139
+ + L+ ++ G K + + + YN +N + L++GG + G
Sbjct: 68 VSDYVRYFLHQHIIQLGQPATVKVTANLIRLLSYNNKNTLE---TGLIVGGWDKYEGGSI 124
Query: 140 YLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRS 199
Y V + G + G G+ L W + +S E+ L+ KC+ + + RD +
Sbjct: 125 Y--SVPLGGTMLQLPFAIGGSGSSYLYGFLDQAWKDGMSKEEAEALVVKCVSLAIARDGA 182
Query: 200 AVNKLQIAKITEEGTT 215
+ ++ I EG T
Sbjct: 183 SGGVVRTVVINSEGVT 198
>gi|315425045|dbj|BAJ46718.1| proteasome endopeptidase complex [Candidatus Caldiarchaeum
subterraneum]
Length = 187
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 83/189 (43%), Gaps = 7/189 (3%)
Query: 28 TSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISD---FQELLR 84
T++V LK DG+++A+D S G I K+ ++I + + +G +SD ++R
Sbjct: 2 TTIVGLKAVDGVVLASDRRASKGFFIASKTTQKIMKVDDSLAIAVAGLLSDAVYLVNVVR 61
Query: 85 NLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGVKNGQKYLGMV 144
+LI G L E ++ + Y+ + P + L++ GV + ++
Sbjct: 62 AERKLI----ALRRGYPLSVAESSKLISNLFYSGLRNYIPYYAELIVAGVDDEGPHVFSS 117
Query: 145 SMIGVNFEDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVNKL 204
M G + V++G G+ +A +L + L E+ + K + + RD + N +
Sbjct: 118 DMSGSMVAEEFVSSGSGSPVAYGVLESLYTPGLKLEEARAIAVKAVEAAMQRDPGSGNGV 177
Query: 205 QIAKITEEG 213
+ I G
Sbjct: 178 DVLAIPVRG 186
>gi|432957515|ref|XP_004085833.1| PREDICTED: proteasome subunit beta type-3-like [Oryzias latipes]
Length = 205
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 89/185 (48%), Gaps = 10/185 (5%)
Query: 27 GTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIKPIGKHSLLGASGEISDFQELLRNL 86
G +V+A++ K+ + +AAD + + ++I P+G+ +G +G +D Q + + L
Sbjct: 8 GGAVMAMRGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGERLYIGLAGLATDVQTVSQRL 67
Query: 87 D-ELILYDNMWDDGNSLGPKELHSYLTRVMYNRRNKFDPLWNSLVLGGV--KNGQKYLGM 143
L LY+ +G + PK S ++ ++Y RR F P + V+ G+ K+ + ++
Sbjct: 68 KFRLNLYE--LKEGRQIKPKTFMSMVSNLLYERR--FGPYYIEPVIAGLDPKSFEPFICS 123
Query: 144 VSMIGVNF-EDSHVATGFGNHLARPILRDEWHENLSYEDGVKLLEKCMRVLLYRDRSAVN 202
+ +IG + V +G + + W +L ED + + + M L DR AV+
Sbjct: 124 LDLIGCPMVTEDFVVSGTCSEQMYGMCESLWEPDLEPEDLFETISQAM--LNAVDRDAVS 181
Query: 203 KLQIA 207
+ +
Sbjct: 182 GMGVV 186
>gi|164426284|ref|XP_960720.2| proteasome component C11 [Neurospora crassa OR74A]
gi|157071273|gb|EAA31484.2| proteasome component C11 [Neurospora crassa OR74A]
Length = 240
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 90/216 (41%), Gaps = 13/216 (6%)
Query: 3 SIQAKQGLVGPNDPIQRTQLPYVTGTSVVALKYKDGILMAADMGGSYGSTIRYKSVERIK 62
S+QA+ + P + QLP + + KD ++AA G+TI S ++ +
Sbjct: 18 SLQAEAPVRVPRRRQFKLQLP----CPAIGITGKDFTIIAASKAAMRGATILKASDDKTR 73
Query: 63 PIGKHSLLGASGEISD---FQELLRNLDELILYDNMWDDGNSLGPKELHSYLTRVMYNRR 119
+ KH+L+ SGE D F E + +L N G L P L +++ +
Sbjct: 74 SLNKHTLMAFSGEAGDTVQFAEYTQANAQLYSMRN----GTDLSPSALANFVRGELATSL 129
Query: 120 NKFDPLWNSLVLGGVK--NGQKYLGMVSMIGVNFEDSHVATGFGNHLARPILRDEWHENL 177
P +L+LGGV + L + + + + A G+ + IL H ++
Sbjct: 130 RSRKPYNVNLLLGGVDPITHKPSLYWLDYLASLAKVPYAAHGYAQYYCLSILDKHHHPDI 189
Query: 178 SYEDGVKLLEKCMRVLLYRDRSAVNKLQIAKITEEG 213
+ G+KLL C L R + + +T++G
Sbjct: 190 TLHQGIKLLNLCTDELKRRLPIDFKGMTVKAVTKDG 225
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.136 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,940,172,843
Number of Sequences: 23463169
Number of extensions: 164023226
Number of successful extensions: 339583
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1241
Number of HSP's successfully gapped in prelim test: 1717
Number of HSP's that attempted gapping in prelim test: 336304
Number of HSP's gapped (non-prelim): 3036
length of query: 242
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 104
effective length of database: 9,121,278,045
effective search space: 948612916680
effective search space used: 948612916680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)