Query 026179
Match_columns 242
No_of_seqs 117 out of 164
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 07:26:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026179.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026179hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3gs3_A Symplekin, LD45768P; he 100.0 5.6E-66 1.9E-70 456.9 21.9 227 3-242 11-238 (257)
2 3o2t_A Symplekin; heat repeat, 100.0 1.3E-64 4.6E-69 469.8 21.3 231 2-242 20-251 (386)
3 2vgl_B AP-2 complex subunit be 96.9 0.0095 3.2E-07 56.9 12.9 80 32-111 107-188 (591)
4 2qk2_A LP04448P; mini spindles 96.7 0.042 1.4E-06 45.8 13.6 105 8-115 98-208 (242)
5 2qk1_A Protein STU2; STU2P, XM 96.4 0.07 2.4E-06 45.6 13.4 185 16-226 24-224 (249)
6 3ltm_A Alpha-REP4; protein eng 96.3 0.13 4.5E-06 41.4 14.1 144 10-169 21-170 (211)
7 2vgl_B AP-2 complex subunit be 96.3 0.12 4.3E-06 49.1 16.1 135 13-169 18-187 (591)
8 1oyz_A Hypothetical protein YI 96.2 0.29 1E-05 41.1 16.3 111 56-169 101-219 (280)
9 1b3u_A Protein (protein phosph 96.1 0.054 1.9E-06 49.9 12.2 68 44-111 162-231 (588)
10 1b3u_A Protein (protein phosph 96.0 0.14 4.7E-06 47.2 14.1 148 6-173 162-312 (588)
11 2qk2_A LP04448P; mini spindles 95.9 0.13 4.6E-06 42.7 12.7 176 17-226 24-209 (242)
12 2qk1_A Protein STU2; STU2P, XM 95.9 0.16 5.5E-06 43.3 13.2 72 44-115 144-223 (249)
13 3ltj_A Alpharep-4; protein eng 95.9 0.11 3.8E-06 41.5 11.5 144 10-169 47-196 (201)
14 4fdd_A Transportin-1; heat rep 95.8 0.13 4.4E-06 50.7 13.6 139 13-169 133-283 (852)
15 3u0r_A Apoptosis inhibitor 5; 95.7 0.047 1.6E-06 51.8 9.7 53 59-111 41-93 (507)
16 4db6_A Armadillo repeat protei 95.5 0.74 2.5E-05 36.6 15.8 138 12-169 58-207 (210)
17 3ltm_A Alpha-REP4; protein eng 95.4 0.31 1.1E-05 39.1 12.7 139 13-167 55-199 (211)
18 2db0_A 253AA long hypothetical 95.4 0.093 3.2E-06 44.4 9.4 101 9-110 108-208 (253)
19 4fdd_A Transportin-1; heat rep 95.4 0.19 6.5E-06 49.5 13.2 106 6-111 88-202 (852)
20 3ltj_A Alpharep-4; protein eng 95.1 0.27 9.3E-06 39.2 11.2 136 18-169 24-165 (201)
21 4hxt_A De novo protein OR329; 95.0 1.1 3.7E-05 36.2 15.6 141 10-170 46-198 (252)
22 4hxt_A De novo protein OR329; 94.8 1.3 4.3E-05 35.7 16.8 144 10-174 88-244 (252)
23 1te4_A Conserved protein MTH18 94.7 0.16 5.5E-06 38.3 8.5 45 57-107 84-128 (131)
24 1u6g_C TIP120 protein, CAND1; 94.7 0.67 2.3E-05 47.5 15.4 154 6-171 5-163 (1230)
25 1w63_A Adapter-related protein 94.6 0.13 4.6E-06 49.3 9.5 126 20-169 46-206 (618)
26 4db8_A Armadillo-repeat protei 94.4 0.73 2.5E-05 37.7 12.5 139 10-168 98-248 (252)
27 2vgl_A Adaptor protein complex 94.4 0.14 4.7E-06 49.5 9.1 93 15-110 118-214 (621)
28 2jdq_A Importin alpha-1 subuni 94.4 1.1 3.6E-05 39.8 14.4 138 17-171 243-390 (450)
29 1ibr_B P95, importin beta-1 su 94.2 0.24 8.2E-06 44.0 9.6 114 44-173 126-248 (462)
30 2jdq_A Importin alpha-1 subuni 94.2 0.34 1.2E-05 43.0 10.6 94 18-111 30-135 (450)
31 3tjz_B Coatomer subunit gamma; 94.1 0.37 1.3E-05 43.8 10.7 123 39-166 132-274 (355)
32 1oyz_A Hypothetical protein YI 93.9 0.37 1.3E-05 40.5 9.9 106 6-118 88-197 (280)
33 1u6g_C TIP120 protein, CAND1; 93.6 3.5 0.00012 42.1 18.2 163 7-172 85-285 (1230)
34 1ibr_B P95, importin beta-1 su 93.4 1.7 5.9E-05 38.3 13.8 134 21-172 143-289 (462)
35 3tpo_A Importin subunit alpha- 93.4 0.95 3.2E-05 42.2 12.6 94 17-110 85-189 (529)
36 1w63_A Adapter-related protein 93.4 0.12 4E-06 49.7 6.4 99 10-111 109-207 (618)
37 3tjz_B Coatomer subunit gamma; 93.1 2.2 7.4E-05 38.7 14.1 103 20-123 38-178 (355)
38 1te4_A Conserved protein MTH18 93.1 0.42 1.5E-05 35.9 8.0 87 48-168 44-130 (131)
39 2bpt_A Importin beta-1 subunit 93.1 1.8 6.3E-05 41.6 14.4 68 43-110 131-208 (861)
40 3ul1_B Importin subunit alpha- 93.0 1.2 4E-05 41.4 12.6 94 17-110 66-170 (510)
41 2bpt_A Importin beta-1 subunit 92.9 4.4 0.00015 39.0 16.8 146 9-172 135-296 (861)
42 1qgr_A Protein (importin beta 92.5 0.65 2.2E-05 44.9 10.4 111 45-171 127-246 (876)
43 2vgl_A Adaptor protein complex 92.4 0.83 2.8E-05 44.0 10.9 128 20-169 50-214 (621)
44 4db8_A Armadillo-repeat protei 92.2 0.93 3.2E-05 37.0 9.6 102 9-111 139-250 (252)
45 4b8j_A Importin subunit alpha- 92.1 1.6 5.3E-05 40.1 12.0 95 17-111 83-188 (528)
46 4b8j_A Importin subunit alpha- 91.9 3.5 0.00012 37.7 14.2 141 21-170 342-495 (528)
47 4db6_A Armadillo repeat protei 91.9 3.8 0.00013 32.2 16.0 138 13-170 17-166 (210)
48 1wa5_B Importin alpha subunit; 91.8 5.7 0.0002 36.4 15.5 93 19-111 226-327 (530)
49 1wa5_B Importin alpha subunit; 90.8 1.9 6.5E-05 39.7 11.2 94 18-111 97-201 (530)
50 1qgr_A Protein (importin beta 90.7 2.1 7.2E-05 41.3 11.8 105 7-112 365-479 (876)
51 3b2a_A TON_1937, putative unch 87.5 13 0.00044 32.3 13.0 118 46-168 33-176 (265)
52 3ul1_B Importin subunit alpha- 86.2 8.6 0.00029 35.5 12.3 113 45-170 357-477 (510)
53 4ady_A RPN2, 26S proteasome re 85.5 4.4 0.00015 41.4 10.4 97 8-111 577-675 (963)
54 1xqr_A HSPBP1 protein; armadil 85.0 5.5 0.00019 34.7 9.8 94 20-113 137-239 (296)
55 1xqr_A HSPBP1 protein; armadil 84.9 2.3 8E-05 37.1 7.3 150 22-172 54-239 (296)
56 4ffb_C Protein STU2; tubulin f 84.4 8.1 0.00028 32.5 10.4 70 45-114 138-214 (278)
57 3tpo_A Importin subunit alpha- 84.2 14 0.00048 34.0 12.8 94 18-111 303-405 (529)
58 4atg_A TAF6; transcription, TF 83.6 11 0.00039 31.1 10.6 112 20-143 58-184 (196)
59 3u0r_A Apoptosis inhibitor 5; 83.5 7 0.00024 37.0 10.2 73 38-112 57-129 (507)
60 2db0_A 253AA long hypothetical 81.7 16 0.00054 30.9 10.6 89 19-109 155-243 (253)
61 1xm9_A Plakophilin 1; armadill 81.0 17 0.00057 33.1 11.8 100 7-110 5-114 (457)
62 2of3_A ZYG-9; multifunctional 80.4 4.4 0.00015 35.2 7.2 30 86-115 210-239 (266)
63 3b2a_A TON_1937, putative unch 72.6 10 0.00035 32.9 7.1 71 6-76 148-219 (265)
64 2z6h_A Catenin beta-1, beta-ca 70.7 32 0.0011 32.4 11.0 101 7-111 17-126 (644)
65 2z6g_A B-catenin; FULL-length, 65.2 20 0.00067 35.2 8.5 62 49-112 118-179 (780)
66 1jdh_A Beta-catenin; beta-cate 65.0 41 0.0014 30.0 10.0 89 20-108 72-168 (529)
67 1jdh_A Beta-catenin; beta-cate 64.4 70 0.0024 28.5 11.5 87 24-110 243-337 (529)
68 3l9t_A Putative uncharacterize 63.9 43 0.0015 28.6 9.3 60 45-107 102-163 (240)
69 2z6h_A Catenin beta-1, beta-ca 63.5 35 0.0012 32.1 9.6 90 20-109 69-166 (644)
70 1wa5_C Importin alpha RE-expor 61.5 93 0.0032 30.8 12.7 102 5-113 3-115 (960)
71 3l9t_A Putative uncharacterize 60.1 61 0.0021 27.7 9.5 111 8-124 90-222 (240)
72 2z6g_A B-catenin; FULL-length, 59.6 19 0.00065 35.3 7.2 70 41-110 145-220 (780)
73 3opb_A SWI5-dependent HO expre 53.5 1.8E+02 0.006 29.0 12.9 132 24-173 575-730 (778)
74 3nmw_A APC variant protein; AR 51.9 32 0.0011 30.5 6.8 66 46-111 263-333 (354)
75 3now_A UNC-45 protein, SD10334 50.7 79 0.0027 31.6 10.0 175 21-225 594-785 (810)
76 3tt9_A Plakophilin-2; cell adh 50.1 51 0.0017 27.6 7.5 64 47-110 9-79 (233)
77 1xm9_A Plakophilin 1; armadill 49.2 24 0.00083 32.0 5.7 64 48-111 4-72 (457)
78 2x19_B Importin-13; nuclear tr 48.8 2E+02 0.0068 28.0 13.9 106 4-114 21-134 (963)
79 2npp_B PP2A, B subunit, serine 45.8 1.8E+02 0.006 27.0 11.0 79 27-107 265-350 (449)
80 3l6x_A Catenin delta-1; cateni 45.6 40 0.0014 32.3 6.7 72 40-111 42-118 (584)
81 4ady_A RPN2, 26S proteasome re 45.0 1.5E+02 0.005 30.4 11.0 103 3-112 467-571 (963)
82 3now_A UNC-45 protein, SD10334 44.7 74 0.0025 31.8 8.7 66 46-111 665-736 (810)
83 3nmz_A APC variant protein; pr 43.2 51 0.0018 30.4 6.9 65 46-110 379-448 (458)
84 2of3_A ZYG-9; multifunctional 37.9 1.8E+02 0.0062 24.8 9.2 73 4-77 163-238 (266)
85 3m1i_C Exportin-1; heat repeat 35.7 62 0.0021 32.5 6.7 70 43-112 492-569 (1049)
86 3tt9_A Plakophilin-2; cell adh 35.6 1.9E+02 0.0065 24.0 10.0 83 23-105 25-117 (233)
87 2h80_A STAR-related lipid tran 33.3 16 0.00053 25.9 1.2 26 191-216 46-71 (81)
88 3nmw_A APC variant protein; AR 32.8 92 0.0031 27.4 6.6 52 59-110 97-154 (354)
89 3qml_C Protein SLS1, nucleotid 32.5 61 0.0021 28.8 5.3 80 33-112 105-189 (315)
90 4gmo_A Putative uncharacterize 30.6 64 0.0022 31.0 5.6 63 46-110 35-103 (684)
91 2x1g_F Cadmus; transport prote 29.3 2.7E+02 0.0094 27.2 10.1 67 42-111 501-571 (971)
92 1vh6_A Flagellar protein FLIS; 26.8 2.2E+02 0.0075 22.0 7.3 31 7-37 31-64 (145)
93 2dky_A RHO-GTPase-activating p 25.9 16 0.00055 26.4 0.3 25 191-215 48-72 (91)
94 4ffb_C Protein STU2; tubulin f 25.9 2.7E+02 0.0093 22.7 16.8 152 15-169 16-210 (278)
95 2x1g_F Cadmus; transport prote 25.1 1.1E+02 0.0037 30.2 6.2 102 5-113 5-115 (971)
96 4hat_C Exportin-1; heat repeat 25.0 78 0.0027 32.3 5.3 69 43-111 492-568 (1023)
97 3c3r_A Programmed cell death 6 24.8 3.6E+02 0.012 23.8 9.7 102 56-170 194-305 (380)
98 2x19_B Importin-13; nuclear tr 24.7 4.6E+02 0.016 25.4 10.7 65 42-109 486-553 (963)
99 2rg8_A Programmed cell death p 23.8 2.6E+02 0.0089 21.8 7.7 64 6-75 10-73 (165)
100 1ho8_A Vacuolar ATP synthase s 23.5 2.3E+02 0.0079 26.5 7.7 39 130-170 437-475 (480)
101 2f4m_B UV excision repair prot 22.8 56 0.0019 21.8 2.5 23 28-51 12-34 (61)
102 3m1i_C Exportin-1; heat repeat 21.6 1.6E+02 0.0055 29.4 6.8 58 39-96 533-602 (1049)
103 2b6c_A Hypothetical protein EF 21.1 1.9E+02 0.0064 23.5 6.1 80 26-111 107-187 (220)
104 3a6p_A Exportin-5; exportin-5, 20.2 6.3E+02 0.022 25.8 11.0 104 6-113 10-126 (1204)
105 2jak_A Serine/threonine-protei 20.1 4.8E+02 0.016 23.6 9.0 81 27-109 277-364 (392)
106 1pve_A HHR23B, UV excision rep 20.1 42 0.0014 23.3 1.5 23 28-51 14-36 (72)
No 1
>3gs3_A Symplekin, LD45768P; helix-turn-helix heat repeat extended loop, transcription, protein binding; 2.40A {Drosophila melanogaster}
Probab=100.00 E-value=5.6e-66 Score=456.93 Aligned_cols=227 Identities=19% Similarity=0.269 Sum_probs=210.0
Q ss_pred cchHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHH
Q 026179 3 AVSRDQALSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSS 82 (242)
Q Consensus 3 ~~~~~~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~ 82 (242)
+++++||++|||+|+.++| ++|+++|+||||+++++||+++|+|||++++|++|++.+||||+++||||+|++++++++
T Consensus 11 ~~~~~~v~~lln~A~~~~~-~~kl~~L~qa~el~~~~dp~ll~~~l~~il~~~~~~~~~vrk~~~~Fi~e~~~~k~~l~~ 89 (257)
T 3gs3_A 11 ATARAKVVDWCNELVIASP-STKCELLAKVQETVLGSCAELAEEFLESVLSLAHDSNMEVRKQVVAFVEQVCKVKVELLP 89 (257)
T ss_dssp HHHHHHHHHHHHHHTTCCH-HHHHHHHHHHHHHHTTTTGGGHHHHHHHHHGGGGCSCHHHHHHHHHHHHHHHHHCGGGHH
T ss_pred ccHHHHHHHHHHHhhhcCc-HHHHHHHHHHHHHHHccCHhHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999988 699999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCC-ccchHHHHHHHHHHHHHHHHHHhccCCCCchHHH
Q 026179 83 ILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGK-VERWLEELWTWMVRFKDAVFAIALEPGLVGTKLL 161 (242)
Q Consensus 83 ~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~-~~~~~~~~W~~m~~~K~~Il~~~~d~~n~Gvr~~ 161 (242)
+++++|.+|++|+|+.|+|++|+|++++||.+| +|++.++ ++++++++|++|+++|++|++ +|+++|+|||++
T Consensus 90 ~~l~~L~~Ll~d~d~~V~K~~I~~~~~iY~~~l-----~~i~~~~~~~~~~~~~W~~m~~lK~~Il~-~~~s~n~gvkl~ 163 (257)
T 3gs3_A 90 HVINVVSMLLRDNSAQVIKRVIQACGSIYKNGL-----QYLCSLMEPGDSAEQAWNILSLIKAQILD-MIDNENDGIRTN 163 (257)
T ss_dssp HHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHH-----HHHTTSSSCCHHHHHHHHHHHHHHHHHHH-GGGSSCHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-----HHHhcCCCCcchHHHHHHHHHHHHHHHHH-HHccCCcchHHH
Confidence 999999999999999999999999999999999 5555454 667899999999999999999 799999999999
Q ss_pred HHHHHhHHhhhccCCCCCcccccccCCCccccccccCCCCCCCChhhHHHHHHHHHHHHHHHHhhccCCCCCeeeeeecc
Q 026179 162 ALKFLETHVLLFTSDSNDFENFTKEGSKQTFNISWLSGGHPFLDPVSLTSEANRMLGTLMDLLQSACNLPGSVIITVVNW 241 (242)
Q Consensus 162 aiKF~e~vIl~qT~~~~d~~~~~~~~~~~d~sl~~vP~~Hp~l~~~~Le~Ea~~lL~~LL~~l~~~~~~~~~l~~a~in~ 241 (242)
|+||+|+||++||++.++ .|++++ ||||++||+|||+|++++||+||+++||+||+++. .+.+++++++|++||
T Consensus 164 ~iKF~e~vIl~qT~~~~~--~~~~~~---d~SL~~Vp~~Hp~l~~~~Le~Ea~~lL~~LL~~~~-~~~iss~~l~a~lns 237 (257)
T 3gs3_A 164 AIKFLEGVVVLQSFADED--SLKRDG---DFSLADVPDHCTLFRREKLQEEGNNILDILLQFHG-TTHISSVNLIACTSS 237 (257)
T ss_dssp HHHHHHHHHHHTSCCCTT--SCCCTT---CCCGGGSCSSCCSSCHHHHHHHHHHHHHHHHHHHT-CTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCcc--cCCCCC---CCCHHHCCCCCCcCCHHHHHHHHHHHHHHHHHHHc-CCccchHHHHHHHHH
Confidence 999999999999976544 344443 99999999999999999999999999999999866 455677789999999
Q ss_pred C
Q 026179 242 L 242 (242)
Q Consensus 242 L 242 (242)
|
T Consensus 238 L 238 (257)
T 3gs3_A 238 L 238 (257)
T ss_dssp H
T ss_pred H
Confidence 6
No 2
>3o2t_A Symplekin; heat repeat, scaffold, protein binding; 1.40A {Homo sapiens} PDB: 3odr_A 3ods_A 4h3k_A* 3o2s_A 3o2q_A* 4h3h_A*
Probab=100.00 E-value=1.3e-64 Score=469.77 Aligned_cols=231 Identities=21% Similarity=0.317 Sum_probs=214.1
Q ss_pred ccchHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhH
Q 026179 2 AAVSRDQALSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHS 81 (242)
Q Consensus 2 ~~~~~~~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~ 81 (242)
.+++++||++|||+|+.+++. +|+++|+|+||+++++||+++++|||++++|++|++.+||||+++||||+|++++|++
T Consensus 20 ~~~~~~~v~~lln~A~~~~~~-~Kl~~L~q~~EL~l~~dpsLl~~fl~~il~f~~d~~~~vRk~~a~FieEa~~~~~el~ 98 (386)
T 3o2t_A 20 HMTTSERVVDLLNQAALITND-SKITVLKQVQELIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELL 98 (386)
T ss_dssp -CCHHHHHHHHHHHHHHCCST-HHHHHHHHHHHHHHTTCGGGGGGGHHHHHGGGGCSCHHHHHHHHHHHHHHHHHCGGGH
T ss_pred cccHHHHHHHHHHhhhccChH-HHHHHHHHHHHHHhccCHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 368999999999999998764 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCC-ccchHHHHHHHHHHHHHHHHHHhccCCCCchHH
Q 026179 82 SILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGK-VERWLEELWTWMVRFKDAVFAIALEPGLVGTKL 160 (242)
Q Consensus 82 ~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~-~~~~~~~~W~~m~~~K~~Il~~~~d~~n~Gvr~ 160 (242)
+.++++|.+||+|+|+.|+|++|+|++++||.+| +|+++++ .+++++++|++|++||++|++ +|+++|+|||+
T Consensus 99 ~~~l~~L~~LL~d~d~~V~K~~I~~~tslYpl~f-----~~i~~~~~~~~~~e~~W~~m~~lK~~Il~-~~ds~n~GVrl 172 (386)
T 3o2t_A 99 LKLIANLNMLLRDENVNVVKKAILTMTQLYKVAL-----QWMVKSRVISELQEACWDMVSAMAGDIIL-LLDSDNDGIRT 172 (386)
T ss_dssp HHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHH-----HHHHHC-CCCHHHHHHHHHHHHHHHHHHH-GGGCSSHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHH-----HHHhcCCCcchhHHHHHHHHHHHHHHHHH-HhccCCcchHH
Confidence 9999999999999999999999999999999999 6666665 456789999999999999999 89999999999
Q ss_pred HHHHHHhHHhhhccCCCCCcccccccCCCccccccccCCCCCCCChhhHHHHHHHHHHHHHHHHhhccCCCCCeeeeeec
Q 026179 161 LALKFLETHVLLFTSDSNDFENFTKEGSKQTFNISWLSGGHPFLDPVSLTSEANRMLGTLMDLLQSACNLPGSVIITVVN 240 (242)
Q Consensus 161 ~aiKF~e~vIl~qT~~~~d~~~~~~~~~~~d~sl~~vP~~Hp~l~~~~Le~Ea~~lL~~LL~~l~~~~~~~~~l~~a~in 240 (242)
+|+||+|+||++||++++|++.|++.+ +||||++||+|||+|++++||+||+++||+||+++++. .+++.+++|++|
T Consensus 173 ~aiKFle~VIl~qS~~~~d~~~p~~~~--~d~SL~~VP~nHp~L~~~~Le~EA~~lLd~LL~~l~~~-~iss~~l~a~ln 249 (386)
T 3o2t_A 173 HAIKFVEGLIVTLSPRMADSEIPRRQE--HDISLDRIPRDHPYIQYNVLWEEGKAALEQLLKFMVHP-AISSINLTTALG 249 (386)
T ss_dssp HHHHHHHHHHHHTSCCCTTCCCCGGGT--TSCCGGGSCTTCSSSCHHHHHHHHHHHHHHHHHHTTC---CCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCcccccccC--CCCCHhhCCCCCCcCCHHHHHHHHHHHHHHHHHHHccc-ccccHHHHHHHH
Confidence 999999999999999988888777654 69999999999999999999999999999999999973 446678999999
Q ss_pred cC
Q 026179 241 WL 242 (242)
Q Consensus 241 ~L 242 (242)
||
T Consensus 250 sL 251 (386)
T 3o2t_A 250 SL 251 (386)
T ss_dssp HH
T ss_pred HH
Confidence 96
No 3
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=96.92 E-value=0.0095 Score=56.95 Aligned_cols=80 Identities=13% Similarity=0.098 Sum_probs=67.4
Q ss_pred HHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHH--HHHHHHHHHhcCCChHHHHHHHHhhhh
Q 026179 32 VRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSS--ILMPVLLAFLRDGDSGVAGKSIVCGTN 109 (242)
Q Consensus 32 ~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~--~~v~~L~~LL~d~~~~V~K~aI~~~~~ 109 (242)
++.+.--..|.+.+.++|.+...-.|+++.|||-.+--+..++...++.+. ..++.|..+|.|+|+.|...|+.+.+.
T Consensus 107 L~~L~~i~~~~~~~~l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p~~~~~~~~~~~l~~lL~d~d~~V~~~A~~aL~~ 186 (591)
T 2vgl_B 107 VRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINAQMVEDQGFLDSLRDLIADSNPMVVANAVAALSE 186 (591)
T ss_dssp HHHHHTCCSGGGHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHTTSCSCHHHHHHHHHHHHH
T ss_pred HHHHHcCChHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhChhhcccccHHHHHHHHhCCCChhHHHHHHHHHHH
Confidence 444443357888888899898887899999999999999999988888776 588999999999999999999998877
Q ss_pred hh
Q 026179 110 FF 111 (242)
Q Consensus 110 lY 111 (242)
+.
T Consensus 187 i~ 188 (591)
T 2vgl_B 187 IS 188 (591)
T ss_dssp HT
T ss_pred HH
Confidence 64
No 4
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=96.66 E-value=0.042 Score=45.85 Aligned_cols=105 Identities=14% Similarity=0.048 Sum_probs=77.4
Q ss_pred HHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhch------hhhH
Q 026179 8 QALSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKA------MEHS 81 (242)
Q Consensus 8 ~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~------~e~~ 81 (242)
.++..|-+....+....+-.....+.+++..-. ++.++|.++..-.++++.+|..++++|..+.... ..++
T Consensus 98 ~ilp~ll~~l~d~~~~vr~~a~~aL~~~~~~~~---~~~ll~~l~~~l~~~~~~vr~~~l~~l~~~l~~~~~~~~~~~~l 174 (242)
T 2qk2_A 98 ACVPSLLEKFKEKKPNVVTALREAIDAIYASTS---LEAQQESIVESLSNKNPSVKSETALFIARALTRTQPTALNKKLL 174 (242)
T ss_dssp HHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTSC---HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCCGGGCCHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHHHcCC---HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCCCccHHHH
Confidence 344455555444554455555666666664222 4778888887656778899999999999864331 2478
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHH
Q 026179 82 SILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVL 115 (242)
Q Consensus 82 ~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l 115 (242)
+.+++.|..+|+|.++.|-+.|+.|++.++..+=
T Consensus 175 ~~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~vg 208 (242)
T 2qk2_A 175 KLLTTSLVKTLNEPDPTVRDSSAEALGTLIKLMG 208 (242)
T ss_dssp HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcC
Confidence 8999999999999999999999999999998764
No 5
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=96.38 E-value=0.07 Score=45.59 Aligned_cols=185 Identities=8% Similarity=0.045 Sum_probs=117.3
Q ss_pred hhcCCChHHHHHHHHHHHH-HHhcCCCchH------HhhhHHHHhhc-CCchhhHHHHHHHHHHHHhhch-----h-hhH
Q 026179 16 ANNHGDLAVKLSSLKQVRG-ILSSADPSLA------AELFPYLVELQ-SSPESLVRKSLIETIEDIGLKA-----M-EHS 81 (242)
Q Consensus 16 A~~~~d~~~kl~~L~q~re-lll~~~p~ll------~~~l~~vl~~~-~d~~~~vrk~~~~fiee~~~~~-----~-e~~ 81 (242)
...+++-.++.+.|..+.. ++. +.|.+. .++++.+...- .|.+..||.-.+..++.++..- . .|.
T Consensus 24 ~l~s~~w~eRk~al~~L~~~~~~-~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~~~f~~~y~ 102 (249)
T 2qk1_A 24 RITSSKWKDRVEALEEFWDSVLS-QTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKTPGFSKDYV 102 (249)
T ss_dssp HHTCSSHHHHHHHHHHHHHHTGG-GCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCTTTSCHHHH
T ss_pred HhhcCCHHHHHHHHHHHHHHHHh-cCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhcccccccHHHH
Confidence 3345777788899999999 774 444332 46666666554 6889889988888887766422 2 578
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHHHHHHHHHHHHHHhccCCCCchHHH
Q 026179 82 SILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWTWMVRFKDAVFAIALEPGLVGTKLL 161 (242)
Q Consensus 82 ~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K~~Il~~~~d~~n~Gvr~~ 161 (242)
..+++.+...+.|..+.|...+..|+-.++..+= . .. +..+.+..++ .++. .+++.|..+|..
T Consensus 103 ~~llp~ll~~l~dkk~~V~~aa~~al~~i~~~~~-----~-~~---~~~~l~~ll~-------~l~~-~l~~k~~~vk~~ 165 (249)
T 2qk1_A 103 SLVFTPLLDRTKEKKPSVIEAIRKALLTICKYYD-----P-LA---SSGRNEDMLK-------DILE-HMKHKTPQIRME 165 (249)
T ss_dssp HHHHHHHHHGGGCCCHHHHHHHHHHHHHHHHHSC-----T-TC---TTCTTHHHHH-------HHHH-HTTCSSHHHHHH
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHcc-----c-cc---cCCcHHHHHH-------HHHH-HHcCCChHHHHH
Confidence 8899999999999988888777777666655320 0 00 0011344444 4555 678889999999
Q ss_pred HHHHHhHHhhhccCCCCCcccccccCCCccccccccCCCCCCCC--hhhHHHHHHHHHHHHHHHHhh
Q 026179 162 ALKFLETHVLLFTSDSNDFENFTKEGSKQTFNISWLSGGHPFLD--PVSLTSEANRMLGTLMDLLQS 226 (242)
Q Consensus 162 aiKF~e~vIl~qT~~~~d~~~~~~~~~~~d~sl~~vP~~Hp~l~--~~~Le~Ea~~lL~~LL~~l~~ 226 (242)
+++|+-+++-..... |..-.. .++=..+|.--++++ ...+.+.|...+..+...+.+
T Consensus 166 al~~l~~~~~~~~~~---~~~l~~-----~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~~vG~ 224 (249)
T 2qk1_A 166 CTQLFNASMKEEKDG---YSTLQR-----YLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIKIFGM 224 (249)
T ss_dssp HHHHHHHHHHHCCSC---SHHHHH-----HHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHcCCc---chhHHH-----HHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhCH
Confidence 999999998653211 000000 000012333222331 566888888888888877764
No 6
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=96.31 E-value=0.13 Score=41.42 Aligned_cols=144 Identities=13% Similarity=0.051 Sum_probs=78.5
Q ss_pred HHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHH
Q 026179 10 LSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSSILMPVLL 89 (242)
Q Consensus 10 ~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~ 89 (242)
+..|-+....+|...+...+..+.++ .++ +.+|.+++.-.|++..+|...+..+..++. ...++.|.
T Consensus 21 ~~~L~~~L~~~~~~vR~~A~~~L~~~---~~~----~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~------~~~~~~L~ 87 (211)
T 3ltm_A 21 VEMYIKNLQDDSYYVRRAAAYALGKI---GDE----RAVEPLIKALKDEDAWVRRAAADALGQIGD------ERAVEPLI 87 (211)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHH---CCG----GGHHHHHHHTTCSCHHHHHHHHHHHHHHCC------GGGHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHh---CCc----cHHHHHHHHHcCCCHHHHHHHHHHHHhhCC------HHHHHHHH
Confidence 34444444456655665555554443 343 555666666567788899999888877653 23445666
Q ss_pred HHhcCCChHHHHHHHHhhhhhhHH-HHHHHhhhhhccCCccchHHHHHHHHHHHH-----HHHHHHhccCCCCchHHHHH
Q 026179 90 AFLRDGDSGVAGKSIVCGTNFFCR-VLEEITMQFRWHGKVERWLEELWTWMVRFK-----DAVFAIALEPGLVGTKLLAL 163 (242)
Q Consensus 90 ~LL~d~~~~V~K~aI~~~~~lY~~-~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K-----~~Il~~~~d~~n~Gvr~~ai 163 (242)
.+|.|+++.|...++.+.+.+-.. ++..+. +.+ ..+.+.--...-..+..+. ..+.. ++++.+..||..|+
T Consensus 88 ~~l~~~~~~vr~~a~~aL~~~~~~~~~~~L~-~~l-~d~~~~vr~~a~~aL~~~~~~~~~~~L~~-~l~d~~~~vr~~a~ 164 (211)
T 3ltm_A 88 KALKDEDGWVRQSAAVALGQIGDERAVEPLI-KAL-KDEDWFVRIAAAFALGEIGDERAVEPLIK-ALKDEDGWVRQSAA 164 (211)
T ss_dssp HHTTCSSHHHHHHHHHHHHHHCCGGGHHHHH-HHT-TCSSHHHHHHHHHHHHHHCCGGGHHHHHH-HTTCSSHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHHHhCcHHHHHHHH-HHH-hCCCHHHHHHHHHHHHHcCCHHHHHHHHH-HHcCCCHHHHHHHH
Confidence 778888888888888887664221 111111 222 1110111122222232222 23344 44666677777777
Q ss_pred HHHhHH
Q 026179 164 KFLETH 169 (242)
Q Consensus 164 KF~e~v 169 (242)
.-+.++
T Consensus 165 ~aL~~~ 170 (211)
T 3ltm_A 165 DALGEI 170 (211)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 766554
No 7
>2vgl_B AP-2 complex subunit beta-1; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Homo sapiens} SCOP: i.23.1.1 PDB: 2jkt_B 2jkr_B* 2xa7_B 1w63_B
Probab=96.31 E-value=0.12 Score=49.10 Aligned_cols=135 Identities=16% Similarity=0.122 Sum_probs=86.2
Q ss_pred HHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhch---------------
Q 026179 13 LAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKA--------------- 77 (242)
Q Consensus 13 ln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~--------------- 77 (242)
|.+....+|..+|.+.++++--+...+++ .+.+++.++.+-.+++.++||-+--++...+...
T Consensus 18 i~~~L~~~~~~~k~~~~~kli~~~~~G~d--~~~~~~~vi~l~~s~~~~~Krl~yl~l~~~~~~~~e~~~l~~n~l~kdL 95 (591)
T 2vgl_B 18 LKAELNNEKKEKRKEAVKKVIAAMTVGKD--VSSLFPDVVNCMQTDNLELKKLVYLYLMNYAKSQPDMAIMAVNSFVKDC 95 (591)
T ss_dssp HHHHTTSSCHHHHHHHHHHHHHHHHTTCC--CGGGHHHHHHTTSSSCHHHHHHHHHHHHHHHHHSHHHHHTTHHHHGGGS
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHCCCC--hHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcccCchHHHHHHHHHHHHc
Confidence 44444456777898888888776654443 1566778888877888899988876666544322
Q ss_pred --------------------hhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHH
Q 026179 78 --------------------MEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWT 137 (242)
Q Consensus 78 --------------------~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~ 137 (242)
+++...+++.+..++.|.+|.|-|.|+.|.+.+|+..- + .|.
T Consensus 96 ~~~n~~ir~~AL~~L~~i~~~~~~~~l~~~l~~~L~d~~~~VRk~A~~al~~i~~~~p--------------~----~~~ 157 (591)
T 2vgl_B 96 EDPNPLIRALAVRTMGCIRVDKITEYLCEPLRKCLKDEDPYVRKTAAVCVAKLHDINA--------------Q----MVE 157 (591)
T ss_dssp SSSSHHHHHHHHHHHHTCCSGGGHHHHHHHHHHHSSCSCHHHHHHHHHHHHHHHHSSC--------------C----CHH
T ss_pred CCCCHHHHHHHHHHHHcCChHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHhhCh--------------h----hcc
Confidence 23455555556666667777777777777766665110 1 111
Q ss_pred HHHHHHHHHHHHhccCCCCchHHHHHHHHhHH
Q 026179 138 WMVRFKDAVFAIALEPGLVGTKLLALKFLETH 169 (242)
Q Consensus 138 ~m~~~K~~Il~~~~d~~n~Gvr~~aiKF~e~v 169 (242)
. ..+-..+.. ++++.+.+|+.+|+..+..+
T Consensus 158 ~-~~~~~~l~~-lL~d~d~~V~~~A~~aL~~i 187 (591)
T 2vgl_B 158 D-QGFLDSLRD-LIADSNPMVVANAVAALSEI 187 (591)
T ss_dssp H-HHHHHHHHH-TTSCSCHHHHHHHHHHHHHH
T ss_pred c-ccHHHHHHH-HhCCCChhHHHHHHHHHHHH
Confidence 0 123345555 66777889999999888774
No 8
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=96.20 E-value=0.29 Score=41.11 Aligned_cols=111 Identities=12% Similarity=-0.050 Sum_probs=65.0
Q ss_pred CCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhHH-HHHHHhhhhhccCCccchHHH
Q 026179 56 SSPESLVRKSLIETIEDIGLKAMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFCR-VLEEITMQFRWHGKVERWLEE 134 (242)
Q Consensus 56 ~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~-~l~~~~~~~~~~~~~~~~~~~ 134 (242)
.|++..||...+.-+..++...+.+...+++.|..+++|+++.|...++.+.+.+-.. ++..+. +.+.... +.--..
T Consensus 101 ~d~~~~vr~~a~~aL~~l~~~~~~~~~~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~~~~~~~L~-~~l~d~~-~~vr~~ 178 (280)
T 1oyz_A 101 NDKSACVRATAIESTAQRCKKNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVINDKATIPLLI-NLLKDPN-GDVRNW 178 (280)
T ss_dssp HCSCHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC---CCHHHHH-HHHTCSS-HHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHhccCCcccHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCCHHHHHHHH-HHHcCCC-HHHHHH
Confidence 4677788888888888887666666667778888888888888888888888765331 111111 1111110 011112
Q ss_pred HHHHHHHHH-------HHHHHHhccCCCCchHHHHHHHHhHH
Q 026179 135 LWTWMVRFK-------DAVFAIALEPGLVGTKLLALKFLETH 169 (242)
Q Consensus 135 ~W~~m~~~K-------~~Il~~~~d~~n~Gvr~~aiKF~e~v 169 (242)
....+..+. ..++. ++.+.+..||..|+..+..+
T Consensus 179 a~~aL~~~~~~~~~~~~~L~~-~l~d~~~~vR~~A~~aL~~~ 219 (280)
T 1oyz_A 179 AAFAININKYDNSDIRDCFVE-MLQDKNEEVRIEAIIGLSYR 219 (280)
T ss_dssp HHHHHHHHTCCCHHHHHHHHH-HTTCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHhhccCcHHHHHHHHH-HhcCCCHHHHHHHHHHHHHh
Confidence 222233332 33344 45667788888888776543
No 9
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=96.14 E-value=0.054 Score=49.91 Aligned_cols=68 Identities=19% Similarity=0.239 Sum_probs=54.7
Q ss_pred HHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhc--hhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 44 AAELFPYLVELQSSPESLVRKSLIETIEDIGLK--AMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 44 l~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~--~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
.++++|.+.++..|++.+||+..++.+..++.. ...+...+++.+..+++|+++.|.+.++.+.+.+.
T Consensus 162 ~~~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~ 231 (588)
T 1b3u_A 162 KAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIA 231 (588)
T ss_dssp HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcHHhHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 456777676777789999999999999988753 33456778888889999999999999998887654
No 10
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A
Probab=95.97 E-value=0.14 Score=47.20 Aligned_cols=148 Identities=13% Similarity=0.055 Sum_probs=99.9
Q ss_pred HHHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCC-chHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhc--hhhhHH
Q 026179 6 RDQALSLLAAANNHGDLAVKLSSLKQVRGILSSADP-SLAAELFPYLVELQSSPESLVRKSLIETIEDIGLK--AMEHSS 82 (242)
Q Consensus 6 ~~~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p-~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~--~~e~~~ 82 (242)
++.++..+.+....++...+...+..+-++.....+ ...+.++|.++.+..|.+..+|+..+..+..++.. ...+..
T Consensus 162 ~~~l~~~l~~l~~d~~~~VR~~a~~~l~~l~~~~~~~~~~~~l~~~l~~~~~d~~~~vr~~a~~~l~~l~~~~~~~~~~~ 241 (588)
T 1b3u_A 162 KAELRQYFRNLCSDDTPMVRRAAASKLGEFAKVLELDNVKSEIIPMFSNLASDEQDSVRLLAVEACVNIAQLLPQEDLEA 241 (588)
T ss_dssp HHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHTSCHHHHHHTHHHHHHHHHTCSCHHHHTTHHHHHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhcHHhHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCHHHHHH
Confidence 355666666665556666777777777776643332 34577888888887888899999999988887653 334566
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHHHHHHHHHHHHHHhccCCCCchHHHH
Q 026179 83 ILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWTWMVRFKDAVFAIALEPGLVGTKLLA 162 (242)
Q Consensus 83 ~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K~~Il~~~~d~~n~Gvr~~a 162 (242)
.+++.+..++.|+++.|-+.++.+++.+....= + +. ....+-..++. ++.+.+..||..|
T Consensus 242 ~~~~~l~~~~~d~~~~vR~~a~~~l~~l~~~~~--------------~--~~---~~~~l~~~l~~-~l~d~~~~vr~~a 301 (588)
T 1b3u_A 242 LVMPTLRQAAEDKSWRVRYMVADKFTELQKAVG--------------P--EI---TKTDLVPAFQN-LMKDCEAEVRAAA 301 (588)
T ss_dssp HTHHHHHHHHTCSSHHHHHHHHHTHHHHHHHHC--------------H--HH---HHHTHHHHHHH-HHTCSSHHHHHHH
T ss_pred HHHHHHHHHccCCCHHHHHHHHHHHHHHHHHhC--------------c--cc---chhHHHHHHHH-HhCCCcHHHHHHH
Confidence 788888889999999999999999888876421 0 00 01112233334 3355667888888
Q ss_pred HHHHhHHhhhc
Q 026179 163 LKFLETHVLLF 173 (242)
Q Consensus 163 iKF~e~vIl~q 173 (242)
.+.+..+.-..
T Consensus 302 ~~~l~~~~~~~ 312 (588)
T 1b3u_A 302 SHKVKEFCENL 312 (588)
T ss_dssp HHHHHHHHHTS
T ss_pred HHHHHHHHHHh
Confidence 88877776543
No 11
>2qk2_A LP04448P; mini spindles, MSPS, XMAP215, DIS1, STU2, heat repeat, micro plus END, +TIP, protein binding; 2.10A {Drosophila melanogaster}
Probab=95.93 E-value=0.13 Score=42.67 Aligned_cols=176 Identities=12% Similarity=0.105 Sum_probs=119.7
Q ss_pred hcCCChHHHHHHHHHHHHHHhcC-C--CchHHhhhHHHHhhc-CCchhhHHHHHHHHHHHHhhc----hhhhHHHHHHHH
Q 026179 17 NNHGDLAVKLSSLKQVRGILSSA-D--PSLAAELFPYLVELQ-SSPESLVRKSLIETIEDIGLK----AMEHSSILMPVL 88 (242)
Q Consensus 17 ~~~~d~~~kl~~L~q~relll~~-~--p~ll~~~l~~vl~~~-~d~~~~vrk~~~~fiee~~~~----~~e~~~~~v~~L 88 (242)
....|-.++...+..+..++... . ..-+.++++.+...- .|++..||.-.+.-++..+.. -..+...+++.|
T Consensus 24 l~s~~w~~R~~a~~~L~~l~~~~~~~~~~~~~~i~~~L~~~l~kd~~~~V~~~a~~~l~~la~~l~~~~~~~~~~ilp~l 103 (242)
T 2qk2_A 24 LEEKKWTLRKESLEVLEKLLTDHPKLENGEYGALVSALKKVITKDSNVVLVAMAGKCLALLAKGLAKRFSNYASACVPSL 103 (242)
T ss_dssp HTCSSHHHHHHHHHHHHHHHHHCSSBCCCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHGGGGHHHHHHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 34577788999999999988641 1 223467777776655 388999999999999887743 125788899999
Q ss_pred HHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHhH
Q 026179 89 LAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWTWMVRFKDAVFAIALEPGLVGTKLLALKFLET 168 (242)
Q Consensus 89 ~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K~~Il~~~~d~~n~Gvr~~aiKF~e~ 168 (242)
...+.|.++.|...+..+...++.. ...+ .+=..++. .+++.|..+|..++.|+.+
T Consensus 104 l~~l~d~~~~vr~~a~~aL~~~~~~----------------~~~~-------~ll~~l~~-~l~~~~~~vr~~~l~~l~~ 159 (242)
T 2qk2_A 104 LEKFKEKKPNVVTALREAIDAIYAS----------------TSLE-------AQQESIVE-SLSNKNPSVKSETALFIAR 159 (242)
T ss_dssp HHGGGCCCHHHHHHHHHHHHHHHTT----------------SCHH-------HHHHHHHH-HTTCSCHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHc----------------CCHH-------HHHHHHHH-HHcCCChHHHHHHHHHHHH
Confidence 9999999998888777777665441 1112 23344556 6678899999999999988
Q ss_pred HhhhccCCCCCcccccccCCCccccccccCCCCCCC--ChhhHHHHHHHHHHHHHHHHhh
Q 026179 169 HVLLFTSDSNDFENFTKEGSKQTFNISWLSGGHPFL--DPVSLTSEANRMLGTLMDLLQS 226 (242)
Q Consensus 169 vIl~qT~~~~d~~~~~~~~~~~d~sl~~vP~~Hp~l--~~~~Le~Ea~~lL~~LL~~l~~ 226 (242)
++-.+.+..... . .+. ..+|.--+.+ ........|...+..+...+..
T Consensus 160 ~l~~~~~~~~~~-----~----~l~-~l~p~l~~~l~D~~~~VR~~A~~~l~~l~~~vg~ 209 (242)
T 2qk2_A 160 ALTRTQPTALNK-----K----LLK-LLTTSLVKTLNEPDPTVRDSSAEALGTLIKLMGD 209 (242)
T ss_dssp HHTTCCGGGCCH-----H----HHH-HHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHcCCCCccH-----H----HHH-HHHHHHHHHhcCCChHHHHHHHHHHHHHHHHcCH
Confidence 765553221000 0 111 2334434444 3456788888888888887764
No 12
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=95.89 E-value=0.16 Score=43.28 Aligned_cols=72 Identities=6% Similarity=0.057 Sum_probs=59.6
Q ss_pred HHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchh-------hhH-HHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHH
Q 026179 44 AAELFPYLVELQSSPESLVRKSLIETIEDIGLKAM-------EHS-SILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVL 115 (242)
Q Consensus 44 l~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~-------e~~-~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l 115 (242)
++.+++.+++.-.+++..+|.....||..++.... .++ +.+++.|..++.|+++.|-+.|+.|++.+|+.+=
T Consensus 144 l~~ll~~l~~~l~~k~~~vk~~al~~l~~~~~~~~~~~~~l~~~l~~~iip~l~~~l~D~~~~VR~aA~~~l~~i~~~vG 223 (249)
T 2qk1_A 144 NEDMLKDILEHMKHKTPQIRMECTQLFNASMKEEKDGYSTLQRYLKDEVVPIVIQIVNDTQPAIRTIGFESFAILIKIFG 223 (249)
T ss_dssp THHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHCCSCSHHHHHHHTTTHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhC
Confidence 67888888876555678999999999988764322 367 8999999999999999999999999999998654
No 13
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=95.86 E-value=0.11 Score=41.53 Aligned_cols=144 Identities=19% Similarity=0.117 Sum_probs=80.0
Q ss_pred HHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHH
Q 026179 10 LSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSSILMPVLL 89 (242)
Q Consensus 10 ~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~ 89 (242)
+..|-++...+|...+...+..+.++ .+| +.+|.+++.-.|++..+|...+..+..++. + ..++.|.
T Consensus 47 ~~~L~~~l~~~~~~vr~~a~~~L~~~---~~~----~~~~~L~~~l~d~~~~vr~~a~~aL~~~~~--~----~~~~~L~ 113 (201)
T 3ltj_A 47 VEPLIKALKDEDAWVRRAAADALGQI---GDE----RAVEPLIKALKDEDGWVRQSAAVALGQIGD--E----RAVEPLI 113 (201)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHH---CCG----GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--G----GGHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhh---CCH----HHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--H----HHHHHHH
Confidence 33444444456655555555444443 344 455656655567888899999888877653 2 2445666
Q ss_pred HHhcCCChHHHHHHHHhhhhhhH-HHHHHHhhhhhccCCccchHHHHHHHHHHHH-----HHHHHHhccCCCCchHHHHH
Q 026179 90 AFLRDGDSGVAGKSIVCGTNFFC-RVLEEITMQFRWHGKVERWLEELWTWMVRFK-----DAVFAIALEPGLVGTKLLAL 163 (242)
Q Consensus 90 ~LL~d~~~~V~K~aI~~~~~lY~-~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K-----~~Il~~~~d~~n~Gvr~~ai 163 (242)
.+|.|+++.|...++.+.+.+-. .++..+. +.+ ......--...-..+..+. ..+.. ++++.+..||..|+
T Consensus 114 ~~l~d~~~~vr~~a~~aL~~~~~~~~~~~L~-~~l-~d~~~~vr~~A~~aL~~~~~~~~~~~L~~-~l~d~~~~vr~~A~ 190 (201)
T 3ltj_A 114 KALKDEDWFVRIAAAFALGEIGDERAVEPLI-KAL-KDEDGWVRQSAADALGEIGGERVRAAMEK-LAETGTGFARKVAV 190 (201)
T ss_dssp HHTTCSSHHHHHHHHHHHHHHTCGGGHHHHH-HHT-TCSSHHHHHHHHHHHHHHCSHHHHHHHHH-HHHHCCHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHHHhCCHHHHHHHH-HHH-cCCCHHHHHHHHHHHHHhCchhHHHHHHH-HHhCCCHHHHHHHH
Confidence 77788889888888888876542 1111111 211 1110011122222232222 23334 44567788999988
Q ss_pred HHHhHH
Q 026179 164 KFLETH 169 (242)
Q Consensus 164 KF~e~v 169 (242)
+.+.++
T Consensus 191 ~aL~~l 196 (201)
T 3ltj_A 191 NYLETH 196 (201)
T ss_dssp HHHHHC
T ss_pred HHHHHH
Confidence 877653
No 14
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=95.76 E-value=0.13 Score=50.69 Aligned_cols=139 Identities=11% Similarity=0.120 Sum_probs=82.8
Q ss_pred HHHhhcCCChHHHHHHHHHHHHHHhcCCCc--------hHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhch----hhh
Q 026179 13 LAAANNHGDLAVKLSSLKQVRGILSSADPS--------LAAELFPYLVELQSSPESLVRKSLIETIEDIGLKA----MEH 80 (242)
Q Consensus 13 ln~A~~~~d~~~kl~~L~q~relll~~~p~--------ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~----~e~ 80 (242)
|-+....+|...+-..+..+..+..+-.+. .++.++|.++.+-.+++.+||...+..+...+... ..+
T Consensus 133 L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~~~~~~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~~~~~~~~~~~ 212 (852)
T 4fdd_A 133 LCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLH 212 (852)
T ss_dssp HHHHHSCSSHHHHHHHHHHHHHHHHHHTTHHHHCSSSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTTTTTCHHHHTS
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHhHHHhchhhhcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 333444455555655665555555322111 25667777776655777888888877776544322 234
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHHHHHHHHHHHHHHhccCCCCchHH
Q 026179 81 SSILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWTWMVRFKDAVFAIALEPGLVGTKL 160 (242)
Q Consensus 81 ~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K~~Il~~~~d~~n~Gvr~ 160 (242)
+..+++.+..++.|+++.|.+.++.|++.+....-+.+ + +..+. +-..++. ...+.++.||.
T Consensus 213 ~~~~l~~l~~~~~d~~~~vr~~a~~~L~~l~~~~~~~~--~--------~~l~~-------l~~~l~~-~~~~~~~~vr~ 274 (852)
T 4fdd_A 213 IDSFIENLFALAGDEEPEVRKNVCRALVMLLEVRMDRL--L--------PHMHN-------IVEYMLQ-RTQDQDENVAL 274 (852)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCHHHH--G--------GGHHH-------HHHHHHH-HHTCSSHHHHH
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCHHHH--H--------HHHHH-------HHHHHHH-HccCCcHHHHH
Confidence 56677777778888888888888888776655332111 1 22222 3333344 33556788999
Q ss_pred HHHHHHhHH
Q 026179 161 LALKFLETH 169 (242)
Q Consensus 161 ~aiKF~e~v 169 (242)
.|+.|+-.+
T Consensus 275 ~a~e~l~~l 283 (852)
T 4fdd_A 275 EACEFWLTL 283 (852)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887654
No 15
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=95.71 E-value=0.047 Score=51.78 Aligned_cols=53 Identities=13% Similarity=0.056 Sum_probs=28.6
Q ss_pred hhhHHHHHHHHHHHHhhchhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 59 ESLVRKSLIETIEDIGLKAMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 59 ~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
+...+|..++||-.-++.-|++...++.++..|.+|+|+.|-+.||...-.+.
T Consensus 41 ~~k~K~LaaQ~I~kffk~FP~l~~~Ai~a~lDLcEDed~~IR~qaik~Lp~~c 93 (507)
T 3u0r_A 41 GTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFA 93 (507)
T ss_dssp CHHHHHHHHHHHHHHGGGCGGGHHHHHHHHHHHHTCSSHHHHHHHHHHGGGGC
T ss_pred CHHHHHHHHHHHHHHHhhChhhHHHHHHHHHHHHhcccHHHHHHHHHhhHHHh
Confidence 34555555555555555555555555555555555555555555555544443
No 16
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=95.46 E-value=0.74 Score=36.57 Aligned_cols=138 Identities=17% Similarity=0.137 Sum_probs=84.5
Q ss_pred HHHHhhcCCChHHHHHHHHHHHHHHhcCCCchH-----HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhh-----H
Q 026179 12 LLAAANNHGDLAVKLSSLKQVRGILSSADPSLA-----AELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEH-----S 81 (242)
Q Consensus 12 lln~A~~~~d~~~kl~~L~q~relll~~~p~ll-----~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~-----~ 81 (242)
.|-+....++...+...+..+.++.. .++... .+.+|.++.+-.+++..+|+..+..|..++...++. -
T Consensus 58 ~L~~lL~~~~~~v~~~a~~~L~~l~~-~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~ 136 (210)
T 4db6_A 58 ALVQLLSSPNEQILQEALWALSNIAS-GGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVID 136 (210)
T ss_dssp HHHHHTTCSCHHHHHHHHHHHHHHTT-SCHHHHHHHHHTTCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHhc-CCcHHHHHHHHCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 33333344565566667777777664 333211 346677777766777888888888888887544332 2
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHHHHH--HHHHHHHHHhccCCCCchH
Q 026179 82 SILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWTWMV--RFKDAVFAIALEPGLVGTK 159 (242)
Q Consensus 82 ~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~~m~--~~K~~Il~~~~d~~n~Gvr 159 (242)
..+++.|..++.++++.|.+.++.+.+++-.. + + +.. ..+. ..-..+.. ++.+++..+|
T Consensus 137 ~~~i~~L~~ll~~~~~~v~~~a~~aL~~l~~~------------~---~--~~~-~~~~~~g~i~~L~~-ll~~~~~~v~ 197 (210)
T 4db6_A 137 AGALPALVQLLSSPNEQILQEALWALSNIASG------------G---N--EQK-QAVKEAGALEKLEQ-LQSHENEKIQ 197 (210)
T ss_dssp TTHHHHHHHHTTCSCHHHHHHHHHHHHHHHTS------------C---H--HHH-HHHHHTTHHHHHHH-GGGCSCHHHH
T ss_pred cCcHHHHHHHHcCCCHHHHHHHHHHHHHHHcC------------C---c--HHH-HHHHHCCCHHHHHH-HHhCCCHHHH
Confidence 34677788888888888888888777766321 0 0 000 0110 12234445 5578888999
Q ss_pred HHHHHHHhHH
Q 026179 160 LLALKFLETH 169 (242)
Q Consensus 160 ~~aiKF~e~v 169 (242)
-.|...+..+
T Consensus 198 ~~a~~aL~~l 207 (210)
T 4db6_A 198 KEAQEALEKL 207 (210)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998887654
No 17
>3ltm_A Alpha-REP4; protein engineering, heat-like repeat, protein binding; HET: 1PE 12P; 2.15A {Synthetic}
Probab=95.41 E-value=0.31 Score=39.13 Aligned_cols=139 Identities=17% Similarity=0.091 Sum_probs=79.7
Q ss_pred HHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHHHHh
Q 026179 13 LAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSSILMPVLLAFL 92 (242)
Q Consensus 13 ln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~~LL 92 (242)
|-++...+|...+...+..+.++ .++ +.+|.+++.-.|++..||.+.+..+..++. + ..++.|..++
T Consensus 55 L~~~l~~~~~~vr~~a~~aL~~~---~~~----~~~~~L~~~l~~~~~~vr~~a~~aL~~~~~--~----~~~~~L~~~l 121 (211)
T 3ltm_A 55 LIKALKDEDAWVRRAAADALGQI---GDE----RAVEPLIKALKDEDGWVRQSAAVALGQIGD--E----RAVEPLIKAL 121 (211)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHH---CCG----GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--G----GGHHHHHHHT
T ss_pred HHHHHcCCCHHHHHHHHHHHHhh---CCH----HHHHHHHHHHcCCCHHHHHHHHHHHHHhCc--H----HHHHHHHHHH
Confidence 33333445655555555544443 333 555666666568888999999999987753 2 3455677788
Q ss_pred cCCChHHHHHHHHhhhhhhHH-HHHHHhhhhhccCCccchHHHHHHHHHHHH-----HHHHHHhccCCCCchHHHHHHHH
Q 026179 93 RDGDSGVAGKSIVCGTNFFCR-VLEEITMQFRWHGKVERWLEELWTWMVRFK-----DAVFAIALEPGLVGTKLLALKFL 166 (242)
Q Consensus 93 ~d~~~~V~K~aI~~~~~lY~~-~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K-----~~Il~~~~d~~n~Gvr~~aiKF~ 166 (242)
+|+++.|...++.+.+.+-.. ++..+. +.+ ....+.--...-..+..+. ..+.. ++++++..||..|+.-+
T Consensus 122 ~d~~~~vr~~a~~aL~~~~~~~~~~~L~-~~l-~d~~~~vr~~a~~aL~~~~~~~~~~~L~~-~l~d~~~~vr~~A~~aL 198 (211)
T 3ltm_A 122 KDEDWFVRIAAAFALGEIGDERAVEPLI-KAL-KDEDGWVRQSAADALGEIGGERVRAAMEK-LAETGTGFARKVAVNYL 198 (211)
T ss_dssp TCSSHHHHHHHHHHHHHHCCGGGHHHHH-HHT-TCSSHHHHHHHHHHHHHHCSHHHHHHHHH-HHHHCCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHHHHHHcCCHHHHHHHH-HHH-cCCCHHHHHHHHHHHHHhCchhHHHHHHH-HHhCCCHHHHHHHHHHH
Confidence 999999999999988766321 111111 222 1111111123333333332 23344 44667778998888766
Q ss_pred h
Q 026179 167 E 167 (242)
Q Consensus 167 e 167 (242)
.
T Consensus 199 ~ 199 (211)
T 3ltm_A 199 E 199 (211)
T ss_dssp H
T ss_pred H
Confidence 4
No 18
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=95.39 E-value=0.093 Score=44.43 Aligned_cols=101 Identities=21% Similarity=0.309 Sum_probs=81.1
Q ss_pred HHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHHHHHHHH
Q 026179 9 ALSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSSILMPVL 88 (242)
Q Consensus 9 v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L 88 (242)
++..|-+--..+|...|+..=..+.|+. ..+|.++++++.++.....+++..=|--...||+-.+-.+++++.--++.|
T Consensus 108 vVp~lfanyrigd~kikIn~~yaLeeIa-ranP~l~~~v~rdi~smltskd~~Dkl~aLnFi~alGen~~~yv~PfLprL 186 (253)
T 2db0_A 108 MIPVLFANYRIGDEKTKINVSYALEEIA-KANPMLMASIVRDFMSMLSSKNREDKLTALNFIEAMGENSFKYVNPFLPRI 186 (253)
T ss_dssp HHHHHHHHSCCCSHHHHHHHHHHHHHHH-HHCHHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHTCCTTTHHHHGGGHHHH
T ss_pred hHHHHHHHHhcCCccceecHHHHHHHHH-HhChHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHhccCccccCcchHHH
Confidence 3444444344578777776666666655 689999999999999988888877777888999988888999988899999
Q ss_pred HHHhcCCChHHHHHHHHhhhhh
Q 026179 89 LAFLRDGDSGVAGKSIVCGTNF 110 (242)
Q Consensus 89 ~~LL~d~~~~V~K~aI~~~~~l 110 (242)
..||.|.|..|--.++.+.+++
T Consensus 187 ~aLL~D~deiVRaSaVEtL~~l 208 (253)
T 2db0_A 187 INLLHDGDEIVRASAVEALVHL 208 (253)
T ss_dssp HGGGGCSSHHHHHHHHHHHHHH
T ss_pred HHHHcCcchhhhHHHHHHHHHH
Confidence 9999999999988888887654
No 19
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B*
Probab=95.36 E-value=0.19 Score=49.48 Aligned_cols=106 Identities=16% Similarity=0.231 Sum_probs=71.4
Q ss_pred HHHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhh-----
Q 026179 6 RDQALSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEH----- 80 (242)
Q Consensus 6 ~~~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~----- 80 (242)
++.+-+.+=++...++...+...-.-+.+++....|.-.++++|.+++.-.+.+..+|.-....+..+|...++.
T Consensus 88 ~~~ik~~ll~~l~~~~~~vr~~~a~~i~~ia~~~~~~~wp~ll~~L~~~l~~~~~~~r~~al~~L~~i~~~~~~~~~~~~ 167 (852)
T 4fdd_A 88 TDFIKSECLNNIGDSSPLIRATVGILITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDV 167 (852)
T ss_dssp HHHHHHHHHTTTTCSSHHHHHHHHHHHHHHHHHTTTTTCTTHHHHHHHHHSCSSHHHHHHHHHHHHHHHHHHTTHHHHCS
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHhHHHhchhh
Confidence 444545444444445543444444444555544455666788888887766777789998888888887654332
Q ss_pred ----HHHHHHHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 81 ----SSILMPVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 81 ----~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
+..+++.+..++.|+++.|.+.|+.+.+.+.
T Consensus 168 ~~~~~~~il~~l~~~l~~~~~~vR~~A~~aL~~~~ 202 (852)
T 4fdd_A 168 LDRPLNIMIPKFLQFFKHSSPKIRSHAVACVNQFI 202 (852)
T ss_dssp SSSCHHHHHHHHTTTTTCSSHHHHHHHHHHHHTTT
T ss_pred hcchHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHH
Confidence 6677888888889999999888888887654
No 20
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=95.08 E-value=0.27 Score=39.18 Aligned_cols=136 Identities=14% Similarity=0.047 Sum_probs=82.5
Q ss_pred cCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHHHHhcCCCh
Q 026179 18 NHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSSILMPVLLAFLRDGDS 97 (242)
Q Consensus 18 ~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~~LL~d~~~ 97 (242)
..+|...+...+..+.++ .++ +.+|.+++.-.+++..+|+..+..+..++. + ..++.|..+|.|+++
T Consensus 24 ~~~~~~vr~~A~~~L~~~---~~~----~~~~~L~~~l~~~~~~vr~~a~~~L~~~~~--~----~~~~~L~~~l~d~~~ 90 (201)
T 3ltj_A 24 QDDSYYVRRAAAYALGKI---GDE----RAVEPLIKALKDEDAWVRRAAADALGQIGD--E----RAVEPLIKALKDEDG 90 (201)
T ss_dssp TCSCHHHHHHHHHHHHHH---CCG----GGHHHHHHHTTCSSHHHHHHHHHHHHHHCC--G----GGHHHHHHHTTCSSH
T ss_pred cCCCHHHHHHHHHHHHhc---CCh----hHHHHHHHHHcCCCHHHHHHHHHHHHhhCC--H----HHHHHHHHHHcCCCH
Confidence 346655666555555543 333 456666666568889999999999987753 2 345677788899999
Q ss_pred HHHHHHHHhhhhhhHH-HHHHHhhhhhccCCccchHHHHHHHHHHHH-----HHHHHHhccCCCCchHHHHHHHHhHH
Q 026179 98 GVAGKSIVCGTNFFCR-VLEEITMQFRWHGKVERWLEELWTWMVRFK-----DAVFAIALEPGLVGTKLLALKFLETH 169 (242)
Q Consensus 98 ~V~K~aI~~~~~lY~~-~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K-----~~Il~~~~d~~n~Gvr~~aiKF~e~v 169 (242)
.|...++.+.+.+-.. ++..+. +.+ ....+.--...-..+..+. ..+.. ++.+.+..||..|+.-+..+
T Consensus 91 ~vr~~a~~aL~~~~~~~~~~~L~-~~l-~d~~~~vr~~a~~aL~~~~~~~~~~~L~~-~l~d~~~~vr~~A~~aL~~~ 165 (201)
T 3ltj_A 91 WVRQSAAVALGQIGDERAVEPLI-KAL-KDEDWFVRIAAAFALGEIGDERAVEPLIK-ALKDEDGWVRQSAADALGEI 165 (201)
T ss_dssp HHHHHHHHHHHHHCCGGGHHHHH-HHT-TCSSHHHHHHHHHHHHHHTCGGGHHHHHH-HTTCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHH-HHH-cCCCHHHHHHHHHHHHHhCCHHHHHHHHH-HHcCCCHHHHHHHHHHHHHh
Confidence 9999999998765322 222221 222 1111111122333333333 23444 55667778999988887665
No 21
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=95.05 E-value=1.1 Score=36.15 Aligned_cols=141 Identities=19% Similarity=0.124 Sum_probs=91.0
Q ss_pred HHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchH-----HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhh----
Q 026179 10 LSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLA-----AELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEH---- 80 (242)
Q Consensus 10 ~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll-----~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~---- 80 (242)
+..|-+....++...+...+..+..+.. .++..- .+.+|.++.+-.+.+.++|+..+..+..++...++.
T Consensus 46 i~~L~~ll~~~~~~v~~~a~~~L~~l~~-~~~~~~~~~~~~~~i~~l~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~ 124 (252)
T 4hxt_A 46 VEVLVKLLTSTDSEVQKEAARALANIAS-GPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAI 124 (252)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHTT-SCHHHHHHHHHTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHc-CChHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 3334444444666677777777777774 323221 246787887766788899999999999888544332
Q ss_pred -HHHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHHHHH--HHHHHHHHHhccCCCCc
Q 026179 81 -SSILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWTWMV--RFKDAVFAIALEPGLVG 157 (242)
Q Consensus 81 -~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~~m~--~~K~~Il~~~~d~~n~G 157 (242)
-...++.|..++.++++.+.+.++.+.+++-..- +..-..+. ..=..++. ++.+.+..
T Consensus 125 ~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~------------------~~~~~~~~~~~~i~~L~~-ll~~~~~~ 185 (252)
T 4hxt_A 125 VDAGGVEVLVKLLTSTDSEVQKEAARALANIASGP------------------DEAIKAIVDAGGVEVLVK-LLTSTDSE 185 (252)
T ss_dssp HHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSC------------------HHHHHHHHHTTHHHHHHH-HTTCSCHH
T ss_pred HHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCC------------------HHHHHHHHHCcCHHHHHH-HHCCCCHH
Confidence 2246788888999999999999888887764210 00001111 12233455 55677889
Q ss_pred hHHHHHHHHhHHh
Q 026179 158 TKLLALKFLETHV 170 (242)
Q Consensus 158 vr~~aiKF~e~vI 170 (242)
+|..|+..+..+.
T Consensus 186 v~~~a~~~L~~l~ 198 (252)
T 4hxt_A 186 VQKEAARALANIA 198 (252)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999998887664
No 22
>4hxt_A De novo protein OR329; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.95A {Artificial gene}
Probab=94.82 E-value=1.3 Score=35.75 Aligned_cols=144 Identities=19% Similarity=0.088 Sum_probs=96.5
Q ss_pred HHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchH-----HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhh----
Q 026179 10 LSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLA-----AELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEH---- 80 (242)
Q Consensus 10 ~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll-----~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~---- 80 (242)
+..|-.....++...+...+..+..+.. .+|... .+.+|.++++-.+.+.++|+..+..+..++...++.
T Consensus 88 i~~l~~ll~~~~~~v~~~a~~~L~~l~~-~~~~~~~~~~~~~~i~~L~~~l~~~~~~~~~~a~~~L~~l~~~~~~~~~~~ 166 (252)
T 4hxt_A 88 VEVLVKLLTSTDSEVQKEAARALANIAS-GPDEAIKAIVDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPDEAIKAI 166 (252)
T ss_dssp HHHHHHHTTCSSHHHHHHHHHHHHHHTT-SCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHc-CCHHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 4444444445666677777777888774 333221 357888888877888999999999999988644332
Q ss_pred -HHHHHHHHHHHhcCCChHHHHHHHHhhhhhhH---HHHHHHhhhhhccCCccchHHHHHHHHHHHHHHHHHHhccCCCC
Q 026179 81 -SSILMPVLLAFLRDGDSGVAGKSIVCGTNFFC---RVLEEITMQFRWHGKVERWLEELWTWMVRFKDAVFAIALEPGLV 156 (242)
Q Consensus 81 -~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~---~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K~~Il~~~~d~~n~ 156 (242)
-..+++.|..++.++++.|.+.++.+..++-. ...+.+.. ..+-..++. +..+++.
T Consensus 167 ~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~l~~-------------------~~~i~~L~~-ll~~~~~ 226 (252)
T 4hxt_A 167 VDAGGVEVLVKLLTSTDSEVQKEAARALANIASGPTSAIKAIVD-------------------AGGVEVLQK-LLTSTDS 226 (252)
T ss_dssp HHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSBHHHHHHHHH-------------------TTHHHHHHH-GGGCSCH
T ss_pred HHCcCHHHHHHHHCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHH-------------------CCCHHHHHH-HHCCCcH
Confidence 24478889999999999999998888776642 11111100 012334555 5577888
Q ss_pred chHHHHHHHHhHHhhhcc
Q 026179 157 GTKLLALKFLETHVLLFT 174 (242)
Q Consensus 157 Gvr~~aiKF~e~vIl~qT 174 (242)
.+|-.|...+..+.-...
T Consensus 227 ~v~~~a~~~L~~l~~~~~ 244 (252)
T 4hxt_A 227 EVQKEAQRALENIKSGGW 244 (252)
T ss_dssp HHHHHHHHHHHHHHHTCB
T ss_pred HHHHHHHHHHHHHHcCCC
Confidence 999999999987755433
No 23
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=94.73 E-value=0.16 Score=38.28 Aligned_cols=45 Identities=13% Similarity=0.144 Sum_probs=19.5
Q ss_pred CchhhHHHHHHHHHHHHhhchhhhHHHHHHHHHHHhcCCChHHHHHHHHhh
Q 026179 57 SPESLVRKSLIETIEDIGLKAMEHSSILMPVLLAFLRDGDSGVAGKSIVCG 107 (242)
Q Consensus 57 d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~ 107 (242)
|++..||+..+..+..++. ...++.|..+++|+|+.|.+.++.+.
T Consensus 84 d~~~~VR~~A~~aL~~~~~------~~a~~~L~~~l~d~~~~vr~~A~~aL 128 (131)
T 1te4_A 84 DDSGFVRSGAARSLEQIGG------ERVRAAMEKLAETGTGFARKVAVNYL 128 (131)
T ss_dssp HCCTHHHHHHHHHHHHHCS------HHHHHHHHHHTTSCCTHHHHHHHHHG
T ss_pred CCCHHHHHHHHHHHHHhCc------HHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 4444444444444444331 12333444444444444444444443
No 24
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=94.67 E-value=0.67 Score=47.45 Aligned_cols=154 Identities=9% Similarity=0.059 Sum_probs=101.7
Q ss_pred HHHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcC----CCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhc-hhhh
Q 026179 6 RDQALSLLAAANNHGDLAVKLSSLKQVRGILSSA----DPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLK-AMEH 80 (242)
Q Consensus 6 ~~~v~~lln~A~~~~d~~~kl~~L~q~relll~~----~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~-~~e~ 80 (242)
..++..+|.... .+|...+...+.++.+.+... +|...+.+++.+++.-.|++.++|+..+..+..++.. .+++
T Consensus 5 ~~~l~~lL~~l~-s~d~~~R~~A~~~L~~~l~~~~~~~~~~~~~~il~~Ll~~L~d~~~~vR~~A~~~L~~l~~~~~~~~ 83 (1230)
T 1u6g_C 5 SYHISNLLEKMT-SSDKDFRFMATNDLMTELQKDSIKLDDDSERKVVKMILKLLEDKNGEVQNLAVKCLGPLVSKVKEYQ 83 (1230)
T ss_dssp CHHHHHHHHHTT-CSSHHHHHHHHHHHHHHTSSSCCSCCTTHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHTTSCHHH
T ss_pred HhHHHHHHHhcC-CCCHhHHHHHHHHHHHHHcccccCCChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 455667777744 477778888888888876432 3345678888888776688999999999888887653 3357
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHHHHHHHHHHHHHHhccCCCCchHH
Q 026179 81 SSILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWTWMVRFKDAVFAIALEPGLVGTKL 160 (242)
Q Consensus 81 ~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K~~Il~~~~d~~n~Gvr~ 160 (242)
...+++.|...+.|+++.|...+..+.+.+....-... .+ .......|..+. ..++..+-++.+..+|-
T Consensus 84 ~~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~-----~~---~~~~~~~~~~ll---p~L~~~l~~~~~~~~~~ 152 (1230)
T 1u6g_C 84 VETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPAS-----SG---SALAANVCKKIT---GRLTSAIAKQEDVSVQL 152 (1230)
T ss_dssp HHHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-------------CCTHHHHHHHHH---HHHHHHHSCCSCHHHHH
T ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcc-----cc---cchHHHHHHHHH---HHHHHHHcCCCchHHHH
Confidence 78888888888899988886666666655543211000 00 012345666443 34455232367788999
Q ss_pred HHHHHHhHHhh
Q 026179 161 LALKFLETHVL 171 (242)
Q Consensus 161 ~aiKF~e~vIl 171 (242)
.|+..+..++-
T Consensus 153 ~al~~l~~~~~ 163 (1230)
T 1u6g_C 153 EALDIMADMLS 163 (1230)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988877653
No 25
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=94.60 E-value=0.13 Score=49.32 Aligned_cols=126 Identities=13% Similarity=0.014 Sum_probs=73.9
Q ss_pred CChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhh------------------------
Q 026179 20 GDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGL------------------------ 75 (242)
Q Consensus 20 ~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~------------------------ 75 (242)
+|...|.+.++++--+.+.+++. +..+++++.+-.+++.++||-+-=++...+.
T Consensus 46 ~~~~~k~~~l~kli~~~~~G~d~--~~~~~~vik~~~s~~~~~Krl~Yl~~~~~~~~~~e~~~l~in~l~kDL~~~n~~v 123 (618)
T 1w63_A 46 EDNTYRCRNVAKLLYMHMLGYPA--HFGQLECLKLIASQKFTDKRIGYLGAMLLLDERQDVHLLMTNCIKNDLNHSTQFV 123 (618)
T ss_dssp TCTTTHHHHHHHHHHHHHTTCCC--GGGHHHHHHHHHSSSHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHSCSSSHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCCC--cchHHHHHHHHcCCchHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHhcCCCCHhH
Confidence 34446777777776666555441 3445556555445555556554433333221
Q ss_pred -----------chhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHHHHHHHHH
Q 026179 76 -----------KAMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWTWMVRFKD 144 (242)
Q Consensus 76 -----------~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K~ 144 (242)
..++++..+++.+..+|+|.+|.|-|.|+.|...+|+..-+.+ .. +-.
T Consensus 124 r~lAL~~L~~i~~~~~~~~l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~p~~v-~~--------------------~~~ 182 (618)
T 1w63_A 124 QGLALCTLGCMGSSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELM-EM--------------------FLP 182 (618)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHCGGGG-GG--------------------GGG
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHChHHH-HH--------------------HHH
Confidence 1345667777888888888888888888888888887432111 01 122
Q ss_pred HHHHHhccCCCCchHHHHHHHHhHH
Q 026179 145 AVFAIALEPGLVGTKLLALKFLETH 169 (242)
Q Consensus 145 ~Il~~~~d~~n~Gvr~~aiKF~e~v 169 (242)
.+.. ++.+.+.||+.+|+..+..+
T Consensus 183 ~l~~-lL~D~d~~V~~~Al~~L~~i 206 (618)
T 1w63_A 183 ATKN-LLNEKNHGVLHTSVVLLTEM 206 (618)
T ss_dssp GTTT-STTCCCHHHHHHHHHHHHHH
T ss_pred HHHH-HhCCCCHhHHHHHHHHHHHH
Confidence 2223 44556677777777666554
No 26
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=94.40 E-value=0.73 Score=37.67 Aligned_cols=139 Identities=16% Similarity=0.147 Sum_probs=85.3
Q ss_pred HHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCc---hH-HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhH----
Q 026179 10 LSLLAAANNHGDLAVKLSSLKQVRGILSSADPS---LA-AELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHS---- 81 (242)
Q Consensus 10 ~~lln~A~~~~d~~~kl~~L~q~relll~~~p~---ll-~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~---- 81 (242)
+..|-+....++...+...+..+..+..+.+.. +. .+.+|.++.+-.+++.++|+..+..+..++...++..
T Consensus 98 i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~ 177 (252)
T 4db8_A 98 LPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVI 177 (252)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHGGGCSCHHHHHHHHHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHhhcCCchHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHHcCChHHHHHHH
Confidence 333334444455556666666777666432211 11 3477777777667788899999999988876443322
Q ss_pred -HHHHHHHHHHhcCCChHHHHHHHHhhhhhhH---HHHHHHhhhhhccCCccchHHHHHHHHHHHHHHHHHHhccCCCCc
Q 026179 82 -SILMPVLLAFLRDGDSGVAGKSIVCGTNFFC---RVLEEITMQFRWHGKVERWLEELWTWMVRFKDAVFAIALEPGLVG 157 (242)
Q Consensus 82 -~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~---~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K~~Il~~~~d~~n~G 157 (242)
..+++.|..+|.++++.|.+.++.+.+++-. .....+... ..-..++. ++.+++..
T Consensus 178 ~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~-------------------g~i~~L~~-ll~~~~~~ 237 (252)
T 4db8_A 178 DAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQAVKEA-------------------GALEKLEQ-LQSHENEK 237 (252)
T ss_dssp HTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHT-------------------THHHHHHT-TTTCSSSH
T ss_pred HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHC-------------------CcHHHHHH-HhCCCCHH
Confidence 3457788888888899998888888877742 111111000 12233444 55677888
Q ss_pred hHHHHHHHHhH
Q 026179 158 TKLLALKFLET 168 (242)
Q Consensus 158 vr~~aiKF~e~ 168 (242)
+|..|...+..
T Consensus 238 v~~~A~~~L~~ 248 (252)
T 4db8_A 238 IQKEAQEALEK 248 (252)
T ss_dssp HHHTHHHHHHT
T ss_pred HHHHHHHHHHH
Confidence 88888776643
No 27
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=94.40 E-value=0.14 Score=49.50 Aligned_cols=93 Identities=10% Similarity=0.038 Sum_probs=72.4
Q ss_pred HhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhc--CCchhhHHHHHHHHHHHHhhchhhhHH--HHHHHHHH
Q 026179 15 AANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQ--SSPESLVRKSLIETIEDIGLKAMEHSS--ILMPVLLA 90 (242)
Q Consensus 15 ~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~--~d~~~~vrk~~~~fiee~~~~~~e~~~--~~v~~L~~ 90 (242)
.....++--.+.-.|+..-.+ ..|++++.++|.+...- .|+++.|||-.+--+..+++.+++.+. ..++.+..
T Consensus 118 kDl~~~n~~ir~lALr~L~~i---~~~e~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p~~~~~~~~~~~l~~ 194 (621)
T 2vgl_A 118 NDLASRNPTFMGLALHCIANV---GSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSPDLVPMGDWTSRVVH 194 (621)
T ss_dssp HHHHSCCHHHHHHHHHHHHHH---CCHHHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCGGGCCCCSCHHHHHH
T ss_pred HhcCCCCHHHHHHHHHHhhcc---CCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhChhhcCchhHHHHHHH
Confidence 333445543444444444443 56888899999998876 899999999999999899998999888 89999999
Q ss_pred HhcCCChHHHHHHHHhhhhh
Q 026179 91 FLRDGDSGVAGKSIVCGTNF 110 (242)
Q Consensus 91 LL~d~~~~V~K~aI~~~~~l 110 (242)
+|.|.|+.|+-.|+.+...+
T Consensus 195 lL~d~d~~V~~~a~~~l~~i 214 (621)
T 2vgl_A 195 LLNDQHLGVVTAATSLITTL 214 (621)
T ss_dssp HTTCSCHHHHHHHHHHHHHH
T ss_pred HhCCCCccHHHHHHHHHHHH
Confidence 99999999988888766554
No 28
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=94.39 E-value=1.1 Score=39.77 Aligned_cols=138 Identities=20% Similarity=0.160 Sum_probs=88.4
Q ss_pred hcCCChHHHHHHHHHHHHHHhcCCCc----hH-HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhh----H-HHHHH
Q 026179 17 NNHGDLAVKLSSLKQVRGILSSADPS----LA-AELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEH----S-SILMP 86 (242)
Q Consensus 17 ~~~~d~~~kl~~L~q~relll~~~p~----ll-~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~----~-~~~v~ 86 (242)
...+|...+...+..+..+.. .++. ++ .+.+|.++++-.+++..+|+..+..|..++...++. + ..+++
T Consensus 243 l~~~~~~v~~~a~~~L~~l~~-~~~~~~~~~~~~~~l~~L~~ll~~~~~~vr~~a~~~L~~l~~~~~~~~~~~~~~~~l~ 321 (450)
T 2jdq_A 243 LMHNDYKVVSPALRAVGNIVT-GDDIQTQVILNCSALQSLLHLLSSPKESIKKEACWTISNITAGNRAQIQTVIDANIFP 321 (450)
T ss_dssp TTCSCHHHHHHHHHHHHHHTT-SCHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHH
T ss_pred HCCCchhHHHHHHHHHHHHhh-CChHHHHHHHHCccHHHHHHHHcCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHH
Confidence 334566667777777777764 3332 11 257777777766778899999999998887532221 2 36777
Q ss_pred HHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHH
Q 026179 87 VLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWTWMVRFKDAVFAIALEPGLVGTKLLALKFL 166 (242)
Q Consensus 87 ~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K~~Il~~~~d~~n~Gvr~~aiKF~ 166 (242)
.|..+|.++++.|.+.++.+.+++-...- +......++ ..+-..++. ++++.+..+|..|+..+
T Consensus 322 ~L~~~l~~~~~~v~~~a~~~L~~l~~~~~-------------~~~~~~l~~--~~~i~~L~~-ll~~~~~~v~~~a~~aL 385 (450)
T 2jdq_A 322 ALISILQTAEFRTRKEAAWAITNATSGGS-------------AEQIKYLVE--LGCIKPLCD-LLTVMDSKIVQVALNGL 385 (450)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHHHHHCC-------------HHHHHHHHH--HTCHHHHHH-GGGSSCHHHHHHHHHHH
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHcCCC-------------HHHHHHHHH--CCCHHHHHH-HhcCCCHHHHHHHHHHH
Confidence 88888889999999998888877743200 000111111 113344555 55667888999999888
Q ss_pred hHHhh
Q 026179 167 ETHVL 171 (242)
Q Consensus 167 e~vIl 171 (242)
..+.-
T Consensus 386 ~~l~~ 390 (450)
T 2jdq_A 386 ENILR 390 (450)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 87764
No 29
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=94.19 E-value=0.24 Score=44.03 Aligned_cols=114 Identities=18% Similarity=0.087 Sum_probs=72.9
Q ss_pred HHhhhHHHHhhcCCc--hhhHHHHHHHHHHHHhhch-----hhhHHHHHHHHHHHhcCC--ChHHHHHHHHhhhhhhHHH
Q 026179 44 AAELFPYLVELQSSP--ESLVRKSLIETIEDIGLKA-----MEHSSILMPVLLAFLRDG--DSGVAGKSIVCGTNFFCRV 114 (242)
Q Consensus 44 l~~~l~~vl~~~~d~--~~~vrk~~~~fiee~~~~~-----~e~~~~~v~~L~~LL~d~--~~~V~K~aI~~~~~lY~~~ 114 (242)
.++++|.+++.-.+. +..+|......+..+|... ..++..+++.+..++.|+ ++.|.+.++.|++++...+
T Consensus 126 w~~ll~~L~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~ 205 (462)
T 1ibr_B 126 WPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFT 205 (462)
T ss_dssp CTTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTT
T ss_pred cHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHhCCchhhHhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 356777777664455 7789999999998888632 356778888888899988 7889888998887753211
Q ss_pred HHHHhhhhhccCCccchHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHhHHhhhc
Q 026179 115 LEEITMQFRWHGKVERWLEELWTWMVRFKDAVFAIALEPGLVGTKLLALKFLETHVLLF 173 (242)
Q Consensus 115 l~~~~~~~~~~~~~~~~~~~~W~~m~~~K~~Il~~~~d~~n~Gvr~~aiKF~e~vIl~q 173 (242)
- .....|.....+-..+.. ...+.+..+|..+++.+..++-..
T Consensus 206 ~---------------~~~~~~~~~~~l~~~l~~-~~~~~~~~vr~~~~~~l~~l~~~~ 248 (462)
T 1ibr_B 206 K---------------ANFDKESERHFIMQVVCE-ATQCPDTRVRVAALQNLVKIMSLY 248 (462)
T ss_dssp H---------------HHHTSHHHHHHHHHHHHH-HTTCSSHHHHHHHHHHHHHHHHHC
T ss_pred H---------------HhhhhhHHHHHHHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHH
Confidence 0 011112211112222233 445667788888888877766543
No 30
>2jdq_A Importin alpha-1 subunit; transport, PB2 subunit, nuclear protein, protein transport, armadillo repeats; 2.2A {Homo sapiens} PDB: 3tj3_A
Probab=94.15 E-value=0.34 Score=43.04 Aligned_cols=94 Identities=14% Similarity=0.176 Sum_probs=70.5
Q ss_pred cCCChHHHHHHHHHHHHHHh-cCCCc---hHH--hhhHHHHhhcCCc-hhhHHHHHHHHHHHHhhchhhh-----HHHHH
Q 026179 18 NHGDLAVKLSSLKQVRGILS-SADPS---LAA--ELFPYLVELQSSP-ESLVRKSLIETIEDIGLKAMEH-----SSILM 85 (242)
Q Consensus 18 ~~~d~~~kl~~L~q~relll-~~~p~---ll~--~~l~~vl~~~~d~-~~~vrk~~~~fiee~~~~~~e~-----~~~~v 85 (242)
..+|...+...+..+++++. +.+|. .+. +++|.++++-.+. +.++|...+..+..++...++. -..++
T Consensus 30 ~s~~~~~r~~A~~~L~~l~~~~~~~~~~~~~~~~~~i~~L~~~L~~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~~~i 109 (450)
T 2jdq_A 30 FSKSPEQQLSATQKFRKLLSKEPNPPIDEVISTPGVVARFVEFLKRKENCTLQFESAWVLTNIASGNSLQTRIVIQAGAV 109 (450)
T ss_dssp HSSCHHHHHHHHHHHHHHHHSSSSCCHHHHHTSTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTHH
T ss_pred cCCCHHHHHHHHHHHHHHhcCCCCCcHHHHHHcCCcHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHhCCCH
Confidence 35677789999999999875 24443 222 6788888764455 7899999999999988643332 14578
Q ss_pred HHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 86 PVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 86 ~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
+.|..+|.++++.|...|+.+.+++-
T Consensus 110 ~~L~~lL~~~~~~vr~~a~~~L~~l~ 135 (450)
T 2jdq_A 110 PIFIELLSSEFEDVQEQAVWALGNIA 135 (450)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHc
Confidence 89999999999999999988887664
No 31
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=94.06 E-value=0.37 Score=43.77 Aligned_cols=123 Identities=10% Similarity=0.058 Sum_probs=79.0
Q ss_pred CCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhH---HHH
Q 026179 39 ADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFC---RVL 115 (242)
Q Consensus 39 ~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~---~~l 115 (242)
.+|++++.+.+.+-..-.|+++-|||-.+=-....+...++.+...++.+..++.|.+|.|+=.|+.....+.. .++
T Consensus 132 ~~~~m~~~l~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~pe~v~~~~~~l~~ll~d~n~~V~~~Al~lL~ei~~~d~~a~ 211 (355)
T 3tjz_B 132 TDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVVKRWVNEAQEAASSDNIMVQYHALGLLYHVRKNDRLAV 211 (355)
T ss_dssp CCTTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTTCHHHHHTTHHHHHHHTTCSSHHHHHHHHHHHHHHHTTCHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHhhchHHH
Confidence 46777777777777666688888888776555566777888888888888888888888888666666655543 444
Q ss_pred HHHhhhhhccCCccchHHHHHHHHHHHH--------------HHHHHH---hccCCCCchHHHHHHHH
Q 026179 116 EEITMQFRWHGKVERWLEELWTWMVRFK--------------DAVFAI---ALEPGLVGTKLLALKFL 166 (242)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~W~~m~~~K--------------~~Il~~---~~d~~n~Gvr~~aiKF~ 166 (242)
..+..++..++ ....|..+.-++ ..++.+ ++.+.|..|-.-|+|-+
T Consensus 212 ~kLv~~l~~~~-----l~~~~~q~~llr~l~~~~~~d~~~~~~~~~~~l~~~L~~~~~aVvyEa~k~I 274 (355)
T 3tjz_B 212 SKMISKFTRHG-----LKSPFAYCMMIRVASRQLEDEDGSRDSPLFDFIESCLRNKHEMVVYEAASAI 274 (355)
T ss_dssp HHHHHHHHSSC-----CSCHHHHHHHHHHHTCC-----------------CCCCCSSHHHHHHHHHHH
T ss_pred HHHHHHHhcCC-----CcChHHHHHHHHHHHHhccccchhhHHHHHHHHHHHHcCCChHHHHHHHHHH
Confidence 44433322111 123565555454 223332 44678889999999876
No 32
>1oyz_A Hypothetical protein YIBA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.10A {Escherichia coli} SCOP: a.118.1.16
Probab=93.95 E-value=0.37 Score=40.49 Aligned_cols=106 Identities=14% Similarity=0.156 Sum_probs=71.4
Q ss_pred HHHHHHHHHH-hhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHHHH
Q 026179 6 RDQALSLLAA-ANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSSIL 84 (242)
Q Consensus 6 ~~~v~~lln~-A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~ 84 (242)
...++.+|.+ +...+|...+......+.++-. .+|...+.++|.++..-.|++..||...+..+..++. + .+
T Consensus 88 ~~~l~~~L~~~~~~d~~~~vr~~a~~aL~~l~~-~~~~~~~~~~~~L~~~l~d~~~~vR~~a~~aL~~~~~--~----~~ 160 (280)
T 1oyz_A 88 EDNVFNILNNMALNDKSACVRATAIESTAQRCK-KNPIYSPKIVEQSQITAFDKSTNVRRATAFAISVIND--K----AT 160 (280)
T ss_dssp HHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHH-HCGGGHHHHHHHHHHHTTCSCHHHHHHHHHHHHTC---------CC
T ss_pred chHHHHHHHHHHhcCCCHHHHHHHHHHHHHHhc-cCCcccHHHHHHHHHHhhCCCHHHHHHHHHHHHhcCC--H----HH
Confidence 4557777764 3445676677777777766652 3454556777877777678888999988888876543 2 25
Q ss_pred HHHHHHHhcCCChHHHHHHHHhhhhh---hHHHHHHH
Q 026179 85 MPVLLAFLRDGDSGVAGKSIVCGTNF---FCRVLEEI 118 (242)
Q Consensus 85 v~~L~~LL~d~~~~V~K~aI~~~~~l---Y~~~l~~~ 118 (242)
++.|..++.|+++.|...++.+.+.+ -+.++..+
T Consensus 161 ~~~L~~~l~d~~~~vr~~a~~aL~~~~~~~~~~~~~L 197 (280)
T 1oyz_A 161 IPLLINLLKDPNGDVRNWAAFAININKYDNSDIRDCF 197 (280)
T ss_dssp HHHHHHHHTCSSHHHHHHHHHHHHHHTCCCHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhhccCcHHHHHHH
Confidence 56677778888888888888888777 34444333
No 33
>1u6g_C TIP120 protein, CAND1; cullin repeat, heat repeat, ring finger, ligase; 3.10A {Homo sapiens} SCOP: a.118.1.2 PDB: 4a0c_A
Probab=93.61 E-value=3.5 Score=42.10 Aligned_cols=163 Identities=11% Similarity=0.100 Sum_probs=101.1
Q ss_pred HHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCc---------hHHhhhHHHHhhcC-CchhhHHHHHHHHHHHHhhc
Q 026179 7 DQALSLLAAANNHGDLAVKLSSLKQVRGILSSADPS---------LAAELFPYLVELQS-SPESLVRKSLIETIEDIGLK 76 (242)
Q Consensus 7 ~~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~---------ll~~~l~~vl~~~~-d~~~~vrk~~~~fiee~~~~ 76 (242)
+.++..|-++...++...+-.....+.+++..-.+. ..++++|.+++.-. +++..+|....+.+.++|..
T Consensus 85 ~~i~~~Ll~~l~d~~~~vR~~a~~~L~~i~~~l~~~~~~~~~~~~~~~~llp~L~~~l~~~~~~~~~~~al~~l~~~~~~ 164 (1230)
T 1u6g_C 85 ETIVDTLCTNMLSDKEQLRDISSIGLKTVIGELPPASSGSALAANVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLSR 164 (1230)
T ss_dssp HHHHHHHHHHTTCSSSHHHHHHHHHHHHHHHHCC-----CCTHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHhCCCcccccchHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHH
Confidence 455655555544444334555555566665444443 56888888876644 46778999999999888753
Q ss_pred h----hhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhh------------HHHHHHHhhhhhccCCccchHHHHHHHHH
Q 026179 77 A----MEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFF------------CRVLEEITMQFRWHGKVERWLEELWTWMV 140 (242)
Q Consensus 77 ~----~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY------------~~~l~~~~~~~~~~~~~~~~~~~~W~~m~ 140 (242)
. ..+...+++.+...|.|+++.|-+.|+.|.+.+. +.+++.+... ....+-...-++|..+.
T Consensus 165 ~~~~l~~~~~~ll~~l~~~L~~~~~~vR~~a~~al~~l~~~~~~~~~~~~l~~l~~~L~~~--~~~~~r~~a~~~l~~l~ 242 (1230)
T 1u6g_C 165 QGGLLVNFHPSILTCLLPQLTSPRLAVRKRTIIALGHLVMSCGNIVFVDLIEHLLSELSKN--DSMSTTRTYIQCIAAIS 242 (1230)
T ss_dssp TCSSCTTTHHHHHHHHGGGGGCSSHHHHHHHHHHHHHHTTTC----CTTHHHHHHHHHHHT--CSSCSCTTHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccC--CchhHHHHHHHHHHHHH
Confidence 2 2367888888888899999999999998887653 3333222211 00001123345555554
Q ss_pred H------------HHHHHHHHhccCCCCchHHHHHHHHhHHhhh
Q 026179 141 R------------FKDAVFAIALEPGLVGTKLLALKFLETHVLL 172 (242)
Q Consensus 141 ~------------~K~~Il~~~~d~~n~Gvr~~aiKF~e~vIl~ 172 (242)
. +-..+++ .+...++.+|-.++.+++.++-.
T Consensus 243 ~~~~~~~~~~l~~l~~~ll~-~l~d~~~~vR~~a~~~l~~l~~~ 285 (1230)
T 1u6g_C 243 RQAGHRIGEYLEKIIPLVVK-FCNVDDDELREYCIQAFESFVRR 285 (1230)
T ss_dssp HHSSGGGTTSCTTHHHHHHH-HHSSCCTTTHHHHHHHHHHHHHC
T ss_pred HHhHHHHHHHHHHHHHHHHH-HhcCCCHHHHHHHHHHHHHHHHH
Confidence 3 2233444 33567788999999998887654
No 34
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A
Probab=93.41 E-value=1.7 Score=38.33 Aligned_cols=134 Identities=13% Similarity=0.162 Sum_probs=83.6
Q ss_pred ChHHHHHHHHHHHHHHhcCCCc----hHHhhhHHHHhhcCCc--hhhHHHHHHHHHHHHhh---chh---hhHHHHHHHH
Q 026179 21 DLAVKLSSLKQVRGILSSADPS----LAAELFPYLVELQSSP--ESLVRKSLIETIEDIGL---KAM---EHSSILMPVL 88 (242)
Q Consensus 21 d~~~kl~~L~q~relll~~~p~----ll~~~l~~vl~~~~d~--~~~vrk~~~~fiee~~~---~~~---e~~~~~v~~L 88 (242)
|...+-..|.-++.+..+-.|. ..+.+++.++..-.+. +.+||+..+.-+..... ... .....+++.+
T Consensus 143 ~~~~r~~al~~l~~l~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~l 222 (462)
T 1ibr_B 143 TEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVV 222 (462)
T ss_dssp CHHHHHHHHHHHHHHHHHSCGGGTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHTTTTHHHHTSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhCCchhhHhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 6667778888888887544343 3455666666554455 68899988776655321 111 1123356677
Q ss_pred HHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHH-HHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHh
Q 026179 89 LAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLE-ELWTWMVRFKDAVFAIALEPGLVGTKLLALKFLE 167 (242)
Q Consensus 89 ~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~-~~W~~m~~~K~~Il~~~~d~~n~Gvr~~aiKF~e 167 (242)
..++.++++.|.+.++.++..+....- ... .+... ..|..+. . ...+.++.||..|+.|+.
T Consensus 223 ~~~~~~~~~~vr~~~~~~l~~l~~~~~-----~~~-----~~~~~~~l~~~~~-------~-~~~~~~~~v~~~a~~~l~ 284 (462)
T 1ibr_B 223 CEATQCPDTRVRVAALQNLVKIMSLYY-----QYM-----ETYMGPALFAITI-------E-AMKSDIDEVALQGIEFWS 284 (462)
T ss_dssp HHHTTCSSHHHHHHHHHHHHHHHHHCG-----GGC-----TTTTTTTHHHHHH-------H-HHHCSSHHHHHHHHHHHH
T ss_pred HHhcCCCCHHHHHHHHHHHHHHHHHHH-----HHH-----HHHHHHHHHHHHH-------H-HHcCCchHHHHHHHHHHH
Confidence 777888999999888888877665332 111 13334 5566433 2 234567889999999887
Q ss_pred HHhhh
Q 026179 168 THVLL 172 (242)
Q Consensus 168 ~vIl~ 172 (242)
.++-.
T Consensus 285 ~~~~~ 289 (462)
T 1ibr_B 285 NVCDE 289 (462)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77644
No 35
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=93.38 E-value=0.95 Score=42.15 Aligned_cols=94 Identities=18% Similarity=0.288 Sum_probs=71.3
Q ss_pred hcCCChHHHHHHHHHHHHHHhc-CCCc---hH-HhhhHHHHhh-cCCchhhHHHHHHHHHHHHhhchhhhH-----HHHH
Q 026179 17 NNHGDLAVKLSSLKQVRGILSS-ADPS---LA-AELFPYLVEL-QSSPESLVRKSLIETIEDIGLKAMEHS-----SILM 85 (242)
Q Consensus 17 ~~~~d~~~kl~~L~q~relll~-~~p~---ll-~~~l~~vl~~-~~d~~~~vrk~~~~fiee~~~~~~e~~-----~~~v 85 (242)
..+.|...++..+..+|.++-. ++|. ++ .+.+|.++++ ..+.+++++...+..|..++...++.. ..++
T Consensus 85 l~s~d~~~q~~a~~~~rklLs~~~~~~i~~ii~~G~ip~Lv~lL~~~~~~~~q~~Aa~aL~nia~~~~~~~~~vv~~Gai 164 (529)
T 3tpo_A 85 INSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAI 164 (529)
T ss_dssp HTSSCHHHHHHHHHHHHHHHTSSSCCCHHHHHHTTHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHH
T ss_pred hcCCCHHHHHHHHHHHHHHHcCCCCchHHHHHHCCCHHHHHHHHcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHCCCH
Confidence 3457888999999999999853 3442 11 4678888877 456668899999999988876444322 2367
Q ss_pred HHHHHHhcCCChHHHHHHHHhhhhh
Q 026179 86 PVLLAFLRDGDSGVAGKSIVCGTNF 110 (242)
Q Consensus 86 ~~L~~LL~d~~~~V~K~aI~~~~~l 110 (242)
+.|..+|.++++.|...|+.+.++|
T Consensus 165 p~Lv~LL~s~~~~v~e~A~~aL~nL 189 (529)
T 3tpo_A 165 PAFISLLASPHAHISEQAVWALGNI 189 (529)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 8899999999999999999988877
No 36
>1w63_A Adapter-related protein complex 1 gamma 1 subunit; endocytosis, clathrin adaptor, transport, coated PITS; 4.0A {Mus musculus} SCOP: i.23.1.1
Probab=93.35 E-value=0.12 Score=49.73 Aligned_cols=99 Identities=18% Similarity=0.167 Sum_probs=73.6
Q ss_pred HHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHH
Q 026179 10 LSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSSILMPVLL 89 (242)
Q Consensus 10 ~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~ 89 (242)
+..|......++.-.+...|+..-.+. .|.+.+.++|.+..+-.|+++.|||-.+--+..++...++.+...++.+.
T Consensus 109 in~l~kDL~~~n~~vr~lAL~~L~~i~---~~~~~~~l~~~l~~~L~~~~~~VRk~A~~al~~l~~~~p~~v~~~~~~l~ 185 (618)
T 1w63_A 109 TNCIKNDLNHSTQFVQGLALCTLGCMG---SSEMCRDLAGEVEKLLKTSNSYLRKKAALCAVHVIRKVPELMEMFLPATK 185 (618)
T ss_dssp HHHHHHHHSCSSSHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHHHHHCGGGGGGGGGGTT
T ss_pred HHHHHHhcCCCCHhHHHHHHHHHHhcC---CHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHChHHHHHHHHHHH
Confidence 333333444444334444444444432 56677788888888777899999999999999999989999888999999
Q ss_pred HHhcCCChHHHHHHHHhhhhhh
Q 026179 90 AFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 90 ~LL~d~~~~V~K~aI~~~~~lY 111 (242)
.+|.|.|+.|+-.|+.++..+.
T Consensus 186 ~lL~D~d~~V~~~Al~~L~~i~ 207 (618)
T 1w63_A 186 NLLNEKNHGVLHTSVVLLTEMC 207 (618)
T ss_dssp TSTTCCCHHHHHHHHHHHHHHC
T ss_pred HHhCCCCHhHHHHHHHHHHHHH
Confidence 9999999999988877766554
No 37
>3tjz_B Coatomer subunit gamma; protein trafficking, golgi membrane, protein transport-prote binding complex; HET: GNP; 2.90A {Bos taurus}
Probab=93.10 E-value=2.2 Score=38.66 Aligned_cols=103 Identities=13% Similarity=0.140 Sum_probs=77.1
Q ss_pred CChHHHHH-HHHHHHHHHhcCCC--c-hHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhh--------------------
Q 026179 20 GDLAVKLS-SLKQVRGILSSADP--S-LAAELFPYLVELQSSPESLVRKSLIETIEDIGL-------------------- 75 (242)
Q Consensus 20 ~d~~~kl~-~L~q~relll~~~p--~-ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~-------------------- 75 (242)
+..+.|.. .++++=-+...+++ . ....+++.++.+-..++.++||-+==++.+..+
T Consensus 38 ~~~~~kc~~~l~kll~l~~~G~~f~~~e~t~lf~~v~kl~~s~d~~lKrLvYLyl~~~~~~~~e~iLv~Nsl~kDl~~~N 117 (355)
T 3tjz_B 38 PINPRKCAHILTKILYLINQGEHLGTTEATEAFFAMTKLFQSNDPTLRRMCYLTIKEMSCIAEDVIIVTSSLTKDMTGKE 117 (355)
T ss_dssp SCCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHGGGGCCCHHHHHHHHHHHHHHTTTSSCGGGGHHHHHHHHHSSC
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCCchhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhhcCCCc
Confidence 33445654 78888888877765 1 245777888877668888999988777766421
Q ss_pred --------------chhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhh
Q 026179 76 --------------KAMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFR 123 (242)
Q Consensus 76 --------------~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~ 123 (242)
..++++..+.+.+...+.|.+|.|-|.|+.|+..+|+..-+.+ .+|+
T Consensus 118 ~~iR~lALRtL~~I~~~~m~~~l~~~lk~~L~d~~pyVRk~A~l~~~kL~~~~pe~v-~~~~ 178 (355)
T 3tjz_B 118 DSYRGPAVRALCQITDSTMLQAIERYMKQAIVDKVPSVSSSALVSSLHLLKCSFDVV-KRWV 178 (355)
T ss_dssp HHHHHHHHHHHHHHCCTTTHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTTCHHHH-HTTH
T ss_pred HhHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhccCHHHH-HHHH
Confidence 2467888888899999999999999999999999998877654 3443
No 38
>1te4_A Conserved protein MTH187; methanobacterium thermoautotrophicum, structural proteomics, heat-like repeat; NMR {Methanothermobacterthermautotrophicus} SCOP: a.118.1.16
Probab=93.06 E-value=0.42 Score=35.87 Aligned_cols=87 Identities=21% Similarity=0.149 Sum_probs=58.4
Q ss_pred hHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCC
Q 026179 48 FPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGK 127 (242)
Q Consensus 48 l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~ 127 (242)
+|.+++.-.|++..||.+.+..+..++. ...++.|..+|+|+++.|.+.++.+.+.+-.
T Consensus 44 ~~~L~~~L~d~~~~vR~~A~~aL~~~~~------~~a~~~L~~~L~d~~~~VR~~A~~aL~~~~~--------------- 102 (131)
T 1te4_A 44 FEPLLESLSNEDWRIRGAAAWIIGNFQD------ERAVEPLIKLLEDDSGFVRSGAARSLEQIGG--------------- 102 (131)
T ss_dssp HHHHHHGGGCSCHHHHHHHHHHHGGGCS------HHHHHHHHHHHHHCCTHHHHHHHHHHHHHCS---------------
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHhcCC------HHHHHHHHHHHcCCCHHHHHHHHHHHHHhCc---------------
Confidence 3556655557888999999888876553 2456677788889999999988888776531
Q ss_pred ccchHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHhH
Q 026179 128 VERWLEELWTWMVRFKDAVFAIALEPGLVGTKLLALKFLET 168 (242)
Q Consensus 128 ~~~~~~~~W~~m~~~K~~Il~~~~d~~n~Gvr~~aiKF~e~ 168 (242)
.+ ....+.. ++++.+..||..|+..+.+
T Consensus 103 -----~~-------a~~~L~~-~l~d~~~~vr~~A~~aL~~ 130 (131)
T 1te4_A 103 -----ER-------VRAAMEK-LAETGTGFARKVAVNYLET 130 (131)
T ss_dssp -----HH-------HHHHHHH-HTTSCCTHHHHHHHHHGGG
T ss_pred -----HH-------HHHHHHH-HHhCCCHHHHHHHHHHHHh
Confidence 11 1122333 4456677888888876643
No 39
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=93.05 E-value=1.8 Score=41.64 Aligned_cols=68 Identities=10% Similarity=0.079 Sum_probs=53.2
Q ss_pred hHHhhhHHHHhhcCCc-hhhHHHHHHHHHHHHhhch-------hhhHHHHHHHHHHHhcCC--ChHHHHHHHHhhhhh
Q 026179 43 LAAELFPYLVELQSSP-ESLVRKSLIETIEDIGLKA-------MEHSSILMPVLLAFLRDG--DSGVAGKSIVCGTNF 110 (242)
Q Consensus 43 ll~~~l~~vl~~~~d~-~~~vrk~~~~fiee~~~~~-------~e~~~~~v~~L~~LL~d~--~~~V~K~aI~~~~~l 110 (242)
-.++++|.+++.-.+. +..+|......+..+|... ..+...+++.+...+.|+ ++.|.+.++.|++++
T Consensus 131 ~w~~ll~~L~~~l~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~al~~l~~~ 208 (861)
T 2bpt_A 131 AWPELMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADS 208 (861)
T ss_dssp CCHHHHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSSTTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCChhhhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHH
Confidence 4578888888775565 7789998888888887631 346788888888888887 788999999888765
No 40
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=93.03 E-value=1.2 Score=41.43 Aligned_cols=94 Identities=18% Similarity=0.287 Sum_probs=71.4
Q ss_pred hcCCChHHHHHHHHHHHHHHhc-CCCc---hH-HhhhHHHHhh-cCCchhhHHHHHHHHHHHHhhchhhhHH-----HHH
Q 026179 17 NNHGDLAVKLSSLKQVRGILSS-ADPS---LA-AELFPYLVEL-QSSPESLVRKSLIETIEDIGLKAMEHSS-----ILM 85 (242)
Q Consensus 17 ~~~~d~~~kl~~L~q~relll~-~~p~---ll-~~~l~~vl~~-~~d~~~~vrk~~~~fiee~~~~~~e~~~-----~~v 85 (242)
..+.|...|++...++|.++.. ++|- ++ .+.+|.++++ ..+.+++++...+..|..++...++... .++
T Consensus 66 l~s~d~~~q~~a~~~~rklls~e~~ppi~~ii~~G~ip~LV~lL~~~~~~~lq~~Aa~aL~nias~~~e~~~~vv~~GaI 145 (510)
T 3ul1_B 66 INSNNLESQLQATQAARKLLSREKQPPIDNIIRAGLIPKFVSFLGKTDCSPIQFESAWALTNIASGTSEQTKAVVDGGAI 145 (510)
T ss_dssp HTSSCHHHHHHHHHHHHHHHTCSSCCCHHHHHHTTHHHHHHHHTTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHH
T ss_pred hcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHCCCH
Confidence 3458888999999999999853 3441 22 3468888887 4456678999899888888764444322 367
Q ss_pred HHHHHHhcCCChHHHHHHHHhhhhh
Q 026179 86 PVLLAFLRDGDSGVAGKSIVCGTNF 110 (242)
Q Consensus 86 ~~L~~LL~d~~~~V~K~aI~~~~~l 110 (242)
+.|..+|.++++.|...|+.+.++|
T Consensus 146 p~Lv~lL~s~~~~v~e~A~~aL~nL 170 (510)
T 3ul1_B 146 PAFISLLASPHAHISEQAVWALGNI 170 (510)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 8899999999999999999998877
No 41
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A
Probab=92.89 E-value=4.4 Score=38.97 Aligned_cols=146 Identities=18% Similarity=0.246 Sum_probs=86.2
Q ss_pred HHHHHHHhhcCC-ChHHHHHHHHHHHHHHhcCCCc------hHHhhhHHHHhhcCCc--hhhHHHHHHHHHHHHhh---c
Q 026179 9 ALSLLAAANNHG-DLAVKLSSLKQVRGILSSADPS------LAAELFPYLVELQSSP--ESLVRKSLIETIEDIGL---K 76 (242)
Q Consensus 9 v~~lln~A~~~~-d~~~kl~~L~q~relll~~~p~------ll~~~l~~vl~~~~d~--~~~vrk~~~~fiee~~~---~ 76 (242)
++..|-+....+ |...+...+.-+..+..+-.+. ..+.+++.++..-.++ +.+||...+.-+..... .
T Consensus 135 ll~~L~~~l~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~al~~l~~~~~~~~~ 214 (861)
T 2bpt_A 135 LMKIMVDNTGAEQPENVKRASLLALGYMCESADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKN 214 (861)
T ss_dssp HHHHHHHHTSTTSCHHHHHHHHHHHHHHHHTSSTTSSTTGGGHHHHHHHHHHHHSTTCCCHHHHHHHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcCChhhhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 333343444444 6666777777777776543333 4456666665554455 78899998887766421 1
Q ss_pred hh---hhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHH-HHHHHHHHHHHHHHHHhcc
Q 026179 77 AM---EHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLE-ELWTWMVRFKDAVFAIALE 152 (242)
Q Consensus 77 ~~---e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~-~~W~~m~~~K~~Il~~~~d 152 (242)
.. .....+++.|..++.++++.+.+.++.+++.+....- .. ..+... ..|.. ++. .+.
T Consensus 215 ~~~~~~~~~~ll~~l~~~~~~~~~~~r~~a~~~l~~l~~~~~-----~~-----~~~~l~~~l~~~-------~~~-~~~ 276 (861)
T 2bpt_A 215 NMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSKYY-----TF-----MKPYMEQALYAL-------TIA-TMK 276 (861)
T ss_dssp HHTSHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHG-----GG-----CHHHHHHTHHHH-------HHH-HTT
T ss_pred HccChhHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-----HH-----HHHHHHHHHHHH-------HHH-HHc
Confidence 11 1123467777778889999999988888776654321 10 112223 34442 233 345
Q ss_pred CCCCchHHHHHHHHhHHhhh
Q 026179 153 PGLVGTKLLALKFLETHVLL 172 (242)
Q Consensus 153 ~~n~Gvr~~aiKF~e~vIl~ 172 (242)
+.++.+|..|+.|+..++-.
T Consensus 277 ~~~~~vr~~a~~~l~~l~~~ 296 (861)
T 2bpt_A 277 SPNDKVASMTVEFWSTICEE 296 (861)
T ss_dssp CSSHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHH
Confidence 66788888888888766543
No 42
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=92.53 E-value=0.65 Score=44.95 Aligned_cols=111 Identities=18% Similarity=0.120 Sum_probs=69.6
Q ss_pred HhhhHHHHhhcCCc--hhhHHHHHHHHHHHHhhch-----hhhHHHHHHHHHHHhcCC--ChHHHHHHHHhhhhhhHHHH
Q 026179 45 AELFPYLVELQSSP--ESLVRKSLIETIEDIGLKA-----MEHSSILMPVLLAFLRDG--DSGVAGKSIVCGTNFFCRVL 115 (242)
Q Consensus 45 ~~~l~~vl~~~~d~--~~~vrk~~~~fiee~~~~~-----~e~~~~~v~~L~~LL~d~--~~~V~K~aI~~~~~lY~~~l 115 (242)
++++|.+++.-.++ +..+|+-....+..+|... ..+++.+++.+...+.++ ++.|.+.++.|++.+...+-
T Consensus 127 ~~ll~~l~~~l~~~~~~~~~r~~al~~l~~l~~~~~~~~~~~~~~~ll~~l~~~l~~~~~~~~vr~~a~~~l~~~~~~~~ 206 (876)
T 1qgr_A 127 PELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTK 206 (876)
T ss_dssp TTHHHHHHHHHHCTTCCHHHHHHHHHHHHHHHHHSCHHHHGGGHHHHHHHHHHHHSTTCSCHHHHHHHHHHHHHHGGGCH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhcCHhhHHhHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 45666666554455 7789999988888877532 456788888888888877 67888888888877654211
Q ss_pred HHHhhhhhccCCccchHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHhHHhh
Q 026179 116 EEITMQFRWHGKVERWLEELWTWMVRFKDAVFAIALEPGLVGTKLLALKFLETHVL 171 (242)
Q Consensus 116 ~~~~~~~~~~~~~~~~~~~~W~~m~~~K~~Il~~~~d~~n~Gvr~~aiKF~e~vIl 171 (242)
... ....|.. .+-..+.. ...+.+..+|..+++++..++-
T Consensus 207 ------~~~-------~~~~~~~--~il~~l~~-~~~~~~~~vr~~a~~~l~~l~~ 246 (876)
T 1qgr_A 207 ------ANF-------DKESERH--FIMQVVCE-ATQCPDTRVRVAALQNLVKIMS 246 (876)
T ss_dssp ------HHH-------TSHHHHH--HHHHHHHH-HTTCSSHHHHHHHHHHHHHHHH
T ss_pred ------HHH-------HhHHHHH--HHHHHHHH-HcCCCCHHHHHHHHHHHHHHHH
Confidence 000 0112211 12222333 3355667888888888877664
No 43
>2vgl_A Adaptor protein complex AP-2, alpha 2 subunit; cytoplasmic vesicle, alternative splicing, endocytosis, lipid-binding, golgi apparatus, adaptor, membrane, transport; HET: IHP; 2.59A {Rattus norvegicus} PDB: 2xa7_A 2jkr_A 2jkt_A
Probab=92.41 E-value=0.83 Score=44.02 Aligned_cols=128 Identities=14% Similarity=-0.001 Sum_probs=83.8
Q ss_pred CChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHh-------------------------
Q 026179 20 GDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIG------------------------- 74 (242)
Q Consensus 20 ~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~------------------------- 74 (242)
.|..+|.+.+.++=-+.+.+++. +.++++++.+-.+++.++||-+-=++...+
T Consensus 50 ~~~~~k~~~l~Kli~l~~~G~d~--s~~~~~vvkl~~s~~~~~Krl~YL~l~~~~~~~~e~~~L~iN~l~kDl~~~n~~i 127 (621)
T 2vgl_A 50 LDGYSKKKYVCKLLFIFLLGHDI--DFGHMEAVNLLSSNRYTEKQIGYLFISVLVNSNSELIRLINNAIKNDLASRNPTF 127 (621)
T ss_dssp CCHHHHHHHHHHHHHHHHHSCCC--CSCHHHHHHGGGCSCHHHHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHSCCHHH
T ss_pred CCHHHHHHHHHHHHHHHHcCCCC--chhHHHHHHHhcCCCHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHhcCCCCHHH
Confidence 35667777777776666545431 345677777766777788887654443321
Q ss_pred ----------hchhhhHHHHHHHHHHHh--cCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHHHHHHH
Q 026179 75 ----------LKAMEHSSILMPVLLAFL--RDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWTWMVRF 142 (242)
Q Consensus 75 ----------~~~~e~~~~~v~~L~~LL--~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~ 142 (242)
...++++..+++.+..++ .|.+|.|-|+|+.|...+|+..= . .. +. + .+
T Consensus 128 r~lALr~L~~i~~~e~~~~l~~~v~~~l~~~d~~~~VRK~A~~al~kl~~~~p-----~-~~----~~---~------~~ 188 (621)
T 2vgl_A 128 MGLALHCIANVGSREMAEAFAGEIPKILVAGDTMDSVKQSAALCLLRLYRTSP-----D-LV----PM---G------DW 188 (621)
T ss_dssp HHHHHHHHHHHCCHHHHHHHTTHHHHHHHCSSSCHHHHHHHHHHHHHHHHHCG-----G-GC----CC---C------SC
T ss_pred HHHHHHHhhccCCHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhCh-----h-hc----Cc---h------hH
Confidence 023577888888888899 89999999999999999998321 1 11 10 0 12
Q ss_pred HHHHHHHhccCCCCchHHHHHHHHhHH
Q 026179 143 KDAVFAIALEPGLVGTKLLALKFLETH 169 (242)
Q Consensus 143 K~~Il~~~~d~~n~Gvr~~aiKF~e~v 169 (242)
-+.+.. +++..+.||+.+|+-.+..+
T Consensus 189 ~~~l~~-lL~d~d~~V~~~a~~~l~~i 214 (621)
T 2vgl_A 189 TSRVVH-LLNDQHLGVVTAATSLITTL 214 (621)
T ss_dssp HHHHHH-HTTCSCHHHHHHHHHHHHHH
T ss_pred HHHHHH-HhCCCCccHHHHHHHHHHHH
Confidence 344444 55667778888888776554
No 44
>4db8_A Armadillo-repeat protein; solenoid repeat, de novo protein; 2.50A {Synthetic construct}
Probab=92.18 E-value=0.93 Score=37.01 Aligned_cols=102 Identities=17% Similarity=0.148 Sum_probs=74.1
Q ss_pred HHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchH-----HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhH--
Q 026179 9 ALSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLA-----AELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHS-- 81 (242)
Q Consensus 9 v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll-----~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~-- 81 (242)
++..|-+....++...+...+..+..+.. .++... .+.+|.++++-.+++.++|+..+..|..++...++..
T Consensus 139 ~i~~L~~lL~~~~~~v~~~a~~~L~~l~~-~~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~l~~~~~~~~~~ 217 (252)
T 4db8_A 139 ALPALVQLLSSPNEQILQEALWALSNIAS-GGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQKQA 217 (252)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHTT-SCHHHHHHHHHTTCHHHHHHGGGCSSHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred CHHHHHHHHhCCCHHHHHHHHHHHHHHHc-CChHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHhcCCHHHHHH
Confidence 34444445555676678888888888875 333211 5678888888667789999999999999886444322
Q ss_pred ---HHHHHHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 82 ---SILMPVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 82 ---~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
..+++.|..++.++++.|.+.|..+.+++.
T Consensus 218 ~~~~g~i~~L~~ll~~~~~~v~~~A~~~L~~l~ 250 (252)
T 4db8_A 218 VKEAGALEKLEQLQSHENEKIQKEAQEALEKLQ 250 (252)
T ss_dssp HHHTTHHHHHHTTTTCSSSHHHHTHHHHHHTTC
T ss_pred HHHCCcHHHHHHHhCCCCHHHHHHHHHHHHHHh
Confidence 236778888999999999999999888774
No 45
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=92.07 E-value=1.6 Score=40.13 Aligned_cols=95 Identities=16% Similarity=0.253 Sum_probs=71.6
Q ss_pred hcCCChHHHHHHHHHHHHHHhcCC-Cc----hHHhhhHHHHhhcCCch-hhHHHHHHHHHHHHhhchhhhH-----HHHH
Q 026179 17 NNHGDLAVKLSSLKQVRGILSSAD-PS----LAAELFPYLVELQSSPE-SLVRKSLIETIEDIGLKAMEHS-----SILM 85 (242)
Q Consensus 17 ~~~~d~~~kl~~L~q~relll~~~-p~----ll~~~l~~vl~~~~d~~-~~vrk~~~~fiee~~~~~~e~~-----~~~v 85 (242)
...+|...+...+..++.++.... |. .-.+.+|.++++-.+.+ .++|...+..|..++...++.. ..++
T Consensus 83 L~s~~~~~~~~A~~~L~~l~s~~~~~~~~~~~~~g~v~~Lv~lL~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i 162 (528)
T 4b8j_A 83 VYSDDNNLQLEATTQFRKLLSIERSPPIEEVIQSGVVPRFVQFLTREDFPQLQFEAAWALTNIASGTSENTKVVIDHGAV 162 (528)
T ss_dssp HTSSCHHHHHHHHHHHHHHHTCSSSCCHHHHHHTTCHHHHHHHHTCTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHH
T ss_pred HcCCCHHHHHHHHHHHHHHhcCCCCchHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhCCcH
Confidence 345677788999999999986443 32 12467888887755554 8999999999998887544322 2478
Q ss_pred HHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 86 PVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 86 ~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
+.|..+|.++++.|...|+.+.+++-
T Consensus 163 ~~L~~lL~~~~~~v~~~a~~aL~~l~ 188 (528)
T 4b8j_A 163 PIFVKLLGSSSDDVREQAVWALGNVA 188 (528)
T ss_dssp HHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHh
Confidence 88999999999999999999888874
No 46
>4b8j_A Importin subunit alpha-1A; transport protein, nuclear localization signal; 2.00A {Oryza sativa japonica group} PDB: 4b8o_A 2yns_A 4b8p_A
Probab=91.94 E-value=3.5 Score=37.71 Aligned_cols=141 Identities=13% Similarity=-0.000 Sum_probs=89.4
Q ss_pred ChHHHHHHHHHHHHHHhcCCCch----H-HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhc-hhhhH-----HHHHHHHH
Q 026179 21 DLAVKLSSLKQVRGILSSADPSL----A-AELFPYLVELQSSPESLVRKSLIETIEDIGLK-AMEHS-----SILMPVLL 89 (242)
Q Consensus 21 d~~~kl~~L~q~relll~~~p~l----l-~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~-~~e~~-----~~~v~~L~ 89 (242)
+...+.....-+..+.. .++.. + .+++|.++.+-.+.+.++|+..+..|..++.. .++.. ..+++.|.
T Consensus 342 ~~~v~~~A~~~L~nl~~-~~~~~~~~~~~~~~i~~L~~lL~~~~~~v~~~a~~aL~nl~~~~~~~~~~~l~~~~~i~~L~ 420 (528)
T 4b8j_A 342 KKSIKKEACWTISNITA-GNKDQIQAVINAGIIGPLVNLLQTAEFDIKKEAAWAISNATSGGSHDQIKYLVSEGCIKPLC 420 (528)
T ss_dssp CHHHHHHHHHHHHHHHT-SCHHHHHHHHHTTCHHHHHHHHHHSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHTTCHHHHH
T ss_pred cHHHHHHHHHHHHHHHC-CCHHHHHHHHHCCCHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHCCCHHHHH
Confidence 55566666666777764 33321 1 36677777665556789999999999887654 33322 24677899
Q ss_pred HHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHHHHHHH--HHHHHHHhccCCCCchHHHHHHHHh
Q 026179 90 AFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWTWMVRF--KDAVFAIALEPGLVGTKLLALKFLE 167 (242)
Q Consensus 90 ~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~--K~~Il~~~~d~~n~Gvr~~aiKF~e 167 (242)
.+|.+.++.|.+.++.+..++....-..- ..+. . ........+... .+.|.. +..+.|..|+-.|.+.++
T Consensus 421 ~lL~~~d~~v~~~al~~L~~l~~~~~~~~-~~~~--~----~~~~~~~~i~~~~~~~~l~~-L~~~~~~~v~~~a~~il~ 492 (528)
T 4b8j_A 421 DLLICPDIRIVTVCLEGLENILKVGETDK-TLAA--G----DVNVFSQMIDEAEGLEKIEN-LQSHDNNEIYEKAVKILE 492 (528)
T ss_dssp HGGGCSCHHHHHHHHHHHHHHHHHHHHHH-HHHT--C----SCCHHHHHHHHTTHHHHHHH-GGGCSSHHHHHHHHHHHH
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHhh-hccc--c----cccHHHHHHHHCCcHHHHHH-HHcCCCHHHHHHHHHHHH
Confidence 99999999999999999888876543100 0000 0 001111222211 244555 667899999999999998
Q ss_pred HHh
Q 026179 168 THV 170 (242)
Q Consensus 168 ~vI 170 (242)
++.
T Consensus 493 ~~~ 495 (528)
T 4b8j_A 493 AYW 495 (528)
T ss_dssp HHC
T ss_pred HHC
Confidence 863
No 47
>4db6_A Armadillo repeat protein; solenoid repeat, armadillo repeat motif, de novo protein; 1.80A {Synthetic construct} PDB: 4db9_A 4dba_A
Probab=91.86 E-value=3.8 Score=32.23 Aligned_cols=138 Identities=19% Similarity=0.144 Sum_probs=91.7
Q ss_pred HHHhhcCCChHHHHHHHHHHHHHHhcCCCchH-----HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhH-----H
Q 026179 13 LAAANNHGDLAVKLSSLKQVRGILSSADPSLA-----AELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHS-----S 82 (242)
Q Consensus 13 ln~A~~~~d~~~kl~~L~q~relll~~~p~ll-----~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~-----~ 82 (242)
|..-..++|...+...+..++.+.. .++... .+.+|.++++-.+++.++|...+..+..++...++.. .
T Consensus 17 l~~LL~s~~~~v~~~a~~~L~~l~~-~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~ 95 (210)
T 4db6_A 17 MVQQLNSPDQQELQSALRKLSQIAS-GGNEQIQAVIDAGALPALVQLLSSPNEQILQEALWALSNIASGGNEQIQAVIDA 95 (210)
T ss_dssp HHHHTTCSCHHHHHHHHHHHHHHHT-SCHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHT
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHc-CCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcHHHHHHHHC
Confidence 3333445777788888999998884 333221 3567888888667788999999999999886443321 2
Q ss_pred HHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHHHH--HHHHHHHHHHhccCCCCchHH
Q 026179 83 ILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWTWM--VRFKDAVFAIALEPGLVGTKL 160 (242)
Q Consensus 83 ~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~~m--~~~K~~Il~~~~d~~n~Gvr~ 160 (242)
..++.|..+|.++++.|.+.++.+..++-..- .+.-..+ ...=..++. ++++++..+|.
T Consensus 96 g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~------------------~~~~~~~~~~~~i~~L~~-ll~~~~~~v~~ 156 (210)
T 4db6_A 96 GALPALVQLLSSPNEQILQEALWALSNIASGG------------------NEQIQAVIDAGALPALVQ-LLSSPNEQILQ 156 (210)
T ss_dssp TCHHHHHHHTTCSCHHHHHHHHHHHHHHTTSC------------------HHHHHHHHHTTHHHHHHH-HTTCSCHHHHH
T ss_pred CCHHHHHHHHcCCcHHHHHHHHHHHHHHHcCC------------------HHHHHHHHHcCcHHHHHH-HHcCCCHHHHH
Confidence 36778889999999999999988887764210 0000000 012233445 55667888888
Q ss_pred HHHHHHhHHh
Q 026179 161 LALKFLETHV 170 (242)
Q Consensus 161 ~aiKF~e~vI 170 (242)
.|+..+..+.
T Consensus 157 ~a~~aL~~l~ 166 (210)
T 4db6_A 157 EALWALSNIA 166 (210)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888776654
No 48
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=91.76 E-value=5.7 Score=36.43 Aligned_cols=93 Identities=12% Similarity=0.081 Sum_probs=66.8
Q ss_pred CCChHHHHHHHHHHHHHHhcCCCc----hHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhH-----HHHHHHHH
Q 026179 19 HGDLAVKLSSLKQVRGILSSADPS----LAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHS-----SILMPVLL 89 (242)
Q Consensus 19 ~~d~~~kl~~L~q~relll~~~p~----ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~-----~~~v~~L~ 89 (242)
.++...+...+..+..+..+.+|. ....++|.++.+-.+.+.++|...+..|..++...++.. ..+++.|.
T Consensus 226 ~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~l~~L~~lL~~~d~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~Lv 305 (530)
T 1wa5_B 226 SNKPSLIRTATWTLSNLCRGKKPQPDWSVVSQALPTLAKLIYSMDTETLVDACWAISYLSDGPQEAIQAVIDVRIPKRLV 305 (530)
T ss_dssp SCCHHHHHHHHHHHHHHHCCSSSCCCHHHHGGGHHHHHHHTTCCCHHHHHHHHHHHHHHHSSCHHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHhcCcHHHHH
Confidence 356556777777778887654342 336778888877667778899999988888775433221 25667888
Q ss_pred HHhcCCChHHHHHHHHhhhhhh
Q 026179 90 AFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 90 ~LL~d~~~~V~K~aI~~~~~lY 111 (242)
.+|.++++.|.+.++.+.+++-
T Consensus 306 ~lL~~~~~~v~~~a~~~L~~l~ 327 (530)
T 1wa5_B 306 ELLSHESTLVQTPALRAVGNIV 327 (530)
T ss_dssp HGGGCSCHHHHHHHHHHHHHHT
T ss_pred HHHCCCChhhHHHHHHHHHHHH
Confidence 8899999999888888877664
No 49
>1wa5_B Importin alpha subunit; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1un0_A 2c1t_A 1bk5_A 1ee5_A 1bk6_A 1ee4_A
Probab=90.81 E-value=1.9 Score=39.71 Aligned_cols=94 Identities=22% Similarity=0.319 Sum_probs=71.4
Q ss_pred cCCChHHHHHHHHHHHHHHhcC-CCc---hH-HhhhHHHHhhcCCc-hhhHHHHHHHHHHHHhhchhhhH-----HHHHH
Q 026179 18 NHGDLAVKLSSLKQVRGILSSA-DPS---LA-AELFPYLVELQSSP-ESLVRKSLIETIEDIGLKAMEHS-----SILMP 86 (242)
Q Consensus 18 ~~~d~~~kl~~L~q~relll~~-~p~---ll-~~~l~~vl~~~~d~-~~~vrk~~~~fiee~~~~~~e~~-----~~~v~ 86 (242)
...|...+...+..+++++... +|. +. .+++|.++++-.++ +.++|...+..|..++...++.. ..+++
T Consensus 97 ~s~~~~~~~~A~~~L~~ll~~~~~~~~~~~~~~g~i~~Lv~~L~~~~~~~v~~~A~~~L~~l~~~~~~~~~~~~~~g~i~ 176 (530)
T 1wa5_B 97 NSDDMQEQLSATVKFRQILSREHRPPIDVVIQAGVVPRLVEFMRENQPEMLQLEAAWALTNIASGTSAQTKVVVDADAVP 176 (530)
T ss_dssp SCSSHHHHHHHHHHHHHHTCCSSSCSHHHHHHTTCHHHHHHTTSTTSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTCHH
T ss_pred cCCCHHHHHHHHHHHHHHhCCCCCccHHHHHHCCCHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHH
Confidence 4467778889999999998643 442 11 46888888886665 78999999999999887543322 34577
Q ss_pred HHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 87 VLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 87 ~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
.|..+|.++++.|...|+.+.+++.
T Consensus 177 ~Lv~lL~~~~~~vr~~A~~aL~~l~ 201 (530)
T 1wa5_B 177 LFIQLLYTGSVEVKEQAIWALGNVA 201 (530)
T ss_dssp HHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHh
Confidence 8888899999999999999888774
No 50
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A
Probab=90.68 E-value=2.1 Score=41.33 Aligned_cols=105 Identities=20% Similarity=0.203 Sum_probs=73.8
Q ss_pred HHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCc----hHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhc------
Q 026179 7 DQALSLLAAANNHGDLAVKLSSLKQVRGILSSADPS----LAAELFPYLVELQSSPESLVRKSLIETIEDIGLK------ 76 (242)
Q Consensus 7 ~~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~----ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~------ 76 (242)
+.++..+.+....++-..|-..+.....+...-.|. .+++++|.++..-.|++..||.-.+..+...+..
T Consensus 365 ~~~l~~l~~~l~~~~~~~r~~a~~~l~~i~~~~~~~~~~~~~~~~l~~l~~~l~d~~~~vr~~a~~~l~~~~~~~~~~~~ 444 (876)
T 1qgr_A 365 PHVLPFIKEHIKNPDWRYRDAAVMAFGCILEGPEPSQLKPLVIQAMPTLIELMKDPSVVVRDTAAWTVGRICELLPEAAI 444 (876)
T ss_dssp HHHHHHHHHHTTCSSHHHHHHHHHHHHHTSSSSCHHHHHHHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHCGGGTS
T ss_pred HHHHHHHHHHccCCChHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhCchhcc
Confidence 345666666655566667777777777776433333 4566777777666788899999998888887653
Q ss_pred hhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhH
Q 026179 77 AMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFC 112 (242)
Q Consensus 77 ~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~ 112 (242)
...++..+++.|...+.|+ +.|...++.+.+++..
T Consensus 445 ~~~~l~~~l~~l~~~l~~~-~~v~~~a~~al~~l~~ 479 (876)
T 1qgr_A 445 NDVYLAPLLQCLIEGLSAE-PRVASNVCWAFSSLAE 479 (876)
T ss_dssp STTTHHHHHHHHHHHTTSC-HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHH
Confidence 3468899999999999885 7777676666555443
No 51
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=87.51 E-value=13 Score=32.26 Aligned_cols=118 Identities=9% Similarity=0.004 Sum_probs=73.3
Q ss_pred hhhHHHHhhcCCchhhHHHHHHHHHHHHhhc-----hhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhh------hHHH
Q 026179 46 ELFPYLVELQSSPESLVRKSLIETIEDIGLK-----AMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNF------FCRV 114 (242)
Q Consensus 46 ~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~-----~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~l------Y~~~ 114 (242)
+.+.-+++|-++.+..++--....|||+.+. +...+.+.++.+..++.++|.-|.=+|+.|...+ -+..
T Consensus 33 ~~l~~L~~LL~dkD~~vk~raL~~LeellK~~~~~l~~~~~e~~Ld~iI~llk~~dEkval~A~r~L~~LLe~vpL~~~~ 112 (265)
T 3b2a_A 33 RALFLILELAGEDDETTRLRAFVALGEILKRADSDLRMMVLERHLDVFINALSQENEKVTIKALRALGYLVKDVPMGSKT 112 (265)
T ss_dssp HHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTCCSTTHHHHHHHHHHHHHHHTTCCBCHHH
T ss_pred hHHHHHHHHHhccchHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHcCCCCCHHH
Confidence 4555566677777777777777778777654 2345666677777777777777766666666443 2344
Q ss_pred HHHHhh--hhhccCCccchHHHHHHHHH-------------HHHHHHHHHhccCCCCchHHHHHHHHhH
Q 026179 115 LEEITM--QFRWHGKVERWLEELWTWMV-------------RFKDAVFAIALEPGLVGTKLLALKFLET 168 (242)
Q Consensus 115 l~~~~~--~~~~~~~~~~~~~~~W~~m~-------------~~K~~Il~~~~d~~n~Gvr~~aiKF~e~ 168 (242)
|..+.. +.+.. +.++-.|.-.. .+-+.|++ ++.|.|.++|.++++++=.
T Consensus 113 y~Kl~~aL~dlik----~~~~il~~eaae~Lgklkv~~~~~~V~~~l~s-Ll~Skd~~vK~agl~~L~e 176 (265)
T 3b2a_A 113 FLKAAKTLVSLLE----SPDDMMRIETIDVLSKLQPLEDSKLVRTYINE-LVVSPDLYTKVAGFCLFLN 176 (265)
T ss_dssp HHHHHHHHHHHTT----SCCHHHHHHHHHHHHHCCBSCCCHHHHHHHHH-HHTCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc----CCCchHHHHHHHHhCcCCcccchHHHHHHHHH-HHhCCChhHHHHHHHHHHH
Confidence 444332 22222 22344444332 23467777 4499999999999998833
No 52
>3ul1_B Importin subunit alpha-2; arm repeat, armadillo repeat, nuclear transport, nuclear LOC signal binding, importin beta binding; 1.90A {Mus musculus} PDB: 3ukx_B 3uky_B 3ukz_B 3ukw_B 3ul0_B 3oqs_A 3rz9_A 3rzx_A 3uvu_A 1q1s_C 1q1t_C 3knd_A 1ejy_I 1iq1_C 1ejl_I 1pjn_B 1pjm_B 3q5u_A 3fey_C 3fex_C ...
Probab=86.24 E-value=8.6 Score=35.48 Aligned_cols=113 Identities=17% Similarity=0.127 Sum_probs=76.0
Q ss_pred HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhc-hhhhH-----HHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHHHHHH
Q 026179 45 AELFPYLVELQSSPESLVRKSLIETIEDIGLK-AMEHS-----SILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRVLEEI 118 (242)
Q Consensus 45 ~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~-~~e~~-----~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l~~~ 118 (242)
.+++|.++.+-.+.+.++|+..+..|.-++.. ..+.. ..+++.|..||+..|+.+++.++.+..++....=
T Consensus 357 ~g~i~~Lv~lL~~~~~~v~~~Aa~aL~Nl~~~~~~~~~~~L~~~g~i~~L~~LL~~~d~~i~~~~L~aL~nil~~~~--- 433 (510)
T 3ul1_B 357 HGLVPFLVGVLSKADFKTQKEAAWAITNYTSGGTVEQIVYLVHCGIIEPLMNLLSAKDTKIIQVILDAISNIFQAAE--- 433 (510)
T ss_dssp TTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCCHHHHHHHHHTTCHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHH---
T ss_pred cCCHHHHHHHHcCCCHHHHHHHHHHHHHHHccCCHHHHHHHHHCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhH---
Confidence 35677777776677889999999888776542 33322 2457789999999999999999888888765332
Q ss_pred hhhhhccCCccchHHHHHHHHHH--HHHHHHHHhccCCCCchHHHHHHHHhHHh
Q 026179 119 TMQFRWHGKVERWLEELWTWMVR--FKDAVFAIALEPGLVGTKLLALKFLETHV 170 (242)
Q Consensus 119 ~~~~~~~~~~~~~~~~~W~~m~~--~K~~Il~~~~d~~n~Gvr~~aiKF~e~vI 170 (242)
+- ...+..-..+.+ .-+.|-. +..+.|.-|+-.|.+++|+..
T Consensus 434 --~~-------~~~~~~~~~iee~ggl~~ie~-Lq~~~n~~i~~~A~~iie~yf 477 (510)
T 3ul1_B 434 --KL-------GETEKLSIMIEECGGLDKIEA-LQRHENESVYKASLNLIEKYF 477 (510)
T ss_dssp --TT-------TCHHHHHHHHHHTTHHHHHHH-GGGCSSHHHHHHHHHHHHHHC
T ss_pred --hc-------cchHHHHHHHHHcCcHHHHHH-HHcCCCHHHHHHHHHHHHHHC
Confidence 10 111111111111 1234444 678999999999999999984
No 53
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=85.46 E-value=4.4 Score=41.43 Aligned_cols=97 Identities=18% Similarity=0.110 Sum_probs=65.4
Q ss_pred HHHH-HHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHh-hcCCchhhHHHHHHHHHHHHhhchhhhHHHHH
Q 026179 8 QALS-LLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVE-LQSSPESLVRKSLIETIEDIGLKAMEHSSILM 85 (242)
Q Consensus 8 ~v~~-lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~-~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~v 85 (242)
.+++ ||+-+....+...+....-..-.+. -.+| +..|.+++ +..+.++.+|+-++--+..+|...+. ..++
T Consensus 577 ~aIq~LL~~~~~d~~d~VRraAViaLGlI~-~g~~----e~v~rlv~~L~~~~d~~VR~gAalALGli~aGn~~--~~ai 649 (963)
T 4ady_A 577 SAVKRLLHVAVSDSNDDVRRAAVIALGFVL-LRDY----TTVPRIVQLLSKSHNAHVRCGTAFALGIACAGKGL--QSAI 649 (963)
T ss_dssp HHHHHHHHHHHHCSCHHHHHHHHHHHHHHT-SSSC----SSHHHHTTTGGGCSCHHHHHHHHHHHHHHTSSSCC--HHHH
T ss_pred HHHHHHHHHhccCCcHHHHHHHHHHHHhhc-cCCH----HHHHHHHHHHHhcCCHHHHHHHHHHHHHhccCCCc--HHHH
Confidence 3444 7777776644333333322222222 3566 44566665 34567789999999999888865543 6778
Q ss_pred HHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 86 PVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 86 ~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
++|..++.|.|..|.+.||.+++-+-
T Consensus 650 d~L~~L~~D~d~~Vrq~Ai~ALG~Ig 675 (963)
T 4ady_A 650 DVLDPLTKDPVDFVRQAAMIALSMIL 675 (963)
T ss_dssp HHHHHHHTCSSHHHHHHHHHHHHHHS
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHh
Confidence 89999999999999999998877553
No 54
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=85.00 E-value=5.5 Score=34.70 Aligned_cols=94 Identities=11% Similarity=0.110 Sum_probs=65.9
Q ss_pred CChHHHHHHHHHHHHHHhcCCC---chH-HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhh---H--HHHHHHHHH
Q 026179 20 GDLAVKLSSLKQVRGILSSADP---SLA-AELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEH---S--SILMPVLLA 90 (242)
Q Consensus 20 ~d~~~kl~~L~q~relll~~~p---~ll-~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~---~--~~~v~~L~~ 90 (242)
++...+...+..+-.++-++.| .+. .+.+|.++.+-.+++..+|+..+..|..++...++. + ..+++.|..
T Consensus 137 ~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~Lv~ 216 (296)
T 1xqr_A 137 ACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQLVA 216 (296)
T ss_dssp SCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHHHHH
Confidence 3455667777777777743333 132 357777776655678899999999998887644332 2 246778889
Q ss_pred HhcCCChHHHHHHHHhhhhhhHH
Q 026179 91 FLRDGDSGVAGKSIVCGTNFFCR 113 (242)
Q Consensus 91 LL~d~~~~V~K~aI~~~~~lY~~ 113 (242)
||..+++.|...+..+.+++-..
T Consensus 217 LL~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 217 LVRTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHTSCCSTHHHHHHHHHHHHHTT
T ss_pred HHcCCChhHHHHHHHHHHHHHhC
Confidence 99999999999988888777543
No 55
>1xqr_A HSPBP1 protein; armadillo repeat, superhelical twist, chaperone; 2.10A {Homo sapiens} SCOP: a.118.1.21 PDB: 1xqs_A*
Probab=84.89 E-value=2.3 Score=37.12 Aligned_cols=150 Identities=12% Similarity=-0.002 Sum_probs=93.4
Q ss_pred hHHHHHHHHHHHHHHhcCCC--chH-HhhhHHHHh-hcCCchhhHHHHHHHHHHHHhhchhh---hH--HHHHHHHHHHh
Q 026179 22 LAVKLSSLKQVRGILSSADP--SLA-AELFPYLVE-LQSSPESLVRKSLIETIEDIGLKAME---HS--SILMPVLLAFL 92 (242)
Q Consensus 22 ~~~kl~~L~q~relll~~~p--~ll-~~~l~~vl~-~~~d~~~~vrk~~~~fiee~~~~~~e---~~--~~~v~~L~~LL 92 (242)
..+|...|..+.+++.+.+- .+. -+-+|.++. +-.+++.++|.+.+..|..++...++ .+ ..+++.|..+|
T Consensus 54 ~e~k~~Al~~L~~lv~~~dna~~~~~~G~l~~Lv~~lL~s~~~~vr~~Aa~~Lg~ia~~n~~~~~~vv~~g~l~~Ll~LL 133 (296)
T 1xqr_A 54 QQEREGALELLADLCENMDNAADFCQLSGMHLLVGRYLEAGAAGLRWRAAQLIGTCSQNVAAIQEQVLGLGALRKLLRLL 133 (296)
T ss_dssp HHHHHHHHHHHHHHHTSHHHHHHHHHTTHHHHHHHTTTTCSSHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhChhhHHHHHHcCCHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHCCCHHHHHHHH
Confidence 35788888888888853221 121 245787888 76678889999999999988754332 22 24778888888
Q ss_pred c-CCChHHHHHHHHhhhhhh---HHHHHHHhh--------hhhccCCccchHHHHHHHHHH------HHHHH--------
Q 026179 93 R-DGDSGVAGKSIVCGTNFF---CRVLEEITM--------QFRWHGKVERWLEELWTWMVR------FKDAV-------- 146 (242)
Q Consensus 93 ~-d~~~~V~K~aI~~~~~lY---~~~l~~~~~--------~~~~~~~~~~~~~~~W~~m~~------~K~~I-------- 146 (242)
+ +.++.|.+.|+-+.+++- +...+.+.. +.+.++...-.-+.+|-.-.- .+..+
T Consensus 134 ~~~~~~~v~~~A~~ALsnl~~~~~~~~~~~~~~ggi~~L~~lL~~~d~~v~~~A~~aLs~L~~~~~~~~~~vv~~g~i~~ 213 (296)
T 1xqr_A 134 DRDACDTVRVKALFAISCLVREQEAGLLQFLRLDGFSVLMRAMQQQVQKLKVKSAFLLQNLLVGHPEHKGTLCSMGMVQQ 213 (296)
T ss_dssp HHCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHCGGGHHHHHHTTHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHcCCcHHHHHHHHCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCChHHHHHHHHcCCHHH
Confidence 8 458899999999988874 332211111 111122111223445533221 12222
Q ss_pred -HHHhccCCCCchHHHHHHHHhHHhhh
Q 026179 147 -FAIALEPGLVGTKLLALKFLETHVLL 172 (242)
Q Consensus 147 -l~~~~d~~n~Gvr~~aiKF~e~vIl~ 172 (242)
+. ++.+.+..|+..|...+..++-.
T Consensus 214 Lv~-LL~~~d~~v~~~al~aL~~l~~~ 239 (296)
T 1xqr_A 214 LVA-LVRTEHSPFHEHVLGALCSLVTD 239 (296)
T ss_dssp HHH-HHTSCCSTHHHHHHHHHHHHHTT
T ss_pred HHH-HHcCCChhHHHHHHHHHHHHHhC
Confidence 33 55778889999999888877644
No 56
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=84.43 E-value=8.1 Score=32.51 Aligned_cols=70 Identities=9% Similarity=0.125 Sum_probs=48.9
Q ss_pred HhhhHHHHhhcCCchhhHHHHHHHHHHHH----hhch---hhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhHHH
Q 026179 45 AELFPYLVELQSSPESLVRKSLIETIEDI----GLKA---MEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFCRV 114 (242)
Q Consensus 45 ~~~l~~vl~~~~d~~~~vrk~~~~fiee~----~~~~---~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~~ 114 (242)
+.+++.+++.-...++.+|--...+|..+ +.+. ...+..+++.+..+|.|.|+.|-..|+.+...+|+.+
T Consensus 138 ~~~~e~l~~~l~~Knpkv~~~~l~~l~~~l~~fg~~~~~~k~~l~~i~~~l~k~l~d~~~~VR~aA~~l~~~ly~~~ 214 (278)
T 4ffb_C 138 TQSVELVIPFFEKKLPKLIAAAANCVYELMAAFGLTNVNVQTFLPELLKHVPQLAGHGDRNVRSQTMNLIVEIYKVT 214 (278)
T ss_dssp HHHHHHHGGGGGCSCHHHHHHHHHHHHHHHHHHTTTTCCHHHHHHHHGGGHHHHHTCSSHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHhCCCcCCchhHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHh
Confidence 45566666554566766666555555554 3322 2346667778888999999999999999999999754
No 57
>3tpo_A Importin subunit alpha-2; nuclear import, protein transport; 2.10A {Mus musculus} PDB: 1qgk_B 1qgr_B
Probab=84.17 E-value=14 Score=34.05 Aligned_cols=94 Identities=18% Similarity=0.283 Sum_probs=65.9
Q ss_pred cCCChHHHHHHHHHHHHHHhcCCCc---h-HHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhh-----HHHHHHHH
Q 026179 18 NHGDLAVKLSSLKQVRGILSSADPS---L-AAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEH-----SSILMPVL 88 (242)
Q Consensus 18 ~~~d~~~kl~~L~q~relll~~~p~---l-l~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~-----~~~~v~~L 88 (242)
.+++...+...++.+..++-+.+.. + -.+.+|.++.+-.+++..+|+..+..|..++...+++ -..+++.|
T Consensus 303 ~~~~~~v~~~a~~aL~nl~~~~~~~~~~i~~~g~l~~L~~LL~~~~~~i~~~a~~aL~nl~~~~~~~~~~v~~~g~i~~L 382 (529)
T 3tpo_A 303 GATELPIVTPALRAIGNIVTGTDEQTQKVIDAGALAVFPSLLTNPKTNIQKEATWTMSNITAGRQDQIQQVVNHGLVPFL 382 (529)
T ss_dssp TCSCHHHHHHHHHHHHHHTTSCHHHHHHHHHTTGGGGHHHHTTCSSHHHHHHHHHHHHHHHTSCHHHHHHHHHTTHHHHH
T ss_pred cCCChhHHHHHHHHHHHHHccchHHHHHHhhcccHHHHHHHHcCCCHHHHHHHHHHHHHHhcccHHHHHHHHhcCcHHHH
Confidence 3466667777788888877433211 1 1356676777766778899999999998887643332 22467788
Q ss_pred HHHhcCCChHHHHHHHHhhhhhh
Q 026179 89 LAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 89 ~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
..+|.++++.|.+.|+.+.+++-
T Consensus 383 v~lL~~~~~~v~~~A~~aL~nl~ 405 (529)
T 3tpo_A 383 VGVLSKADFKTQKAAAWAITNYT 405 (529)
T ss_dssp HHHHHSSCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHHHHHHHHHHH
Confidence 88899999999999988877763
No 58
>4atg_A TAF6; transcription, TFIID; HET: NHE; 1.89A {Antonospora locustae}
Probab=83.64 E-value=11 Score=31.15 Aligned_cols=112 Identities=13% Similarity=0.047 Sum_probs=73.4
Q ss_pred CChHHHHHHHHHHHHHHhcCCCc-----hHHhhhHHHHhhc----CCchhhHHHHHHHHHHHHhhch----hhhHHHHHH
Q 026179 20 GDLAVKLSSLKQVRGILSSADPS-----LAAELFPYLVELQ----SSPESLVRKSLIETIEDIGLKA----MEHSSILMP 86 (242)
Q Consensus 20 ~d~~~kl~~L~q~relll~~~p~-----ll~~~l~~vl~~~----~d~~~~vrk~~~~fiee~~~~~----~e~~~~~v~ 86 (242)
.|. .++..+-++-+-++++ |+ ++.+++|.++..- ..+. .+|.+-|+++..+|++. +.+-+++..
T Consensus 58 ~~l-~~L~~lm~~~~ALl~N-~~l~lepYlH~LipsvLtCll~k~l~~~-~LRd~AA~lL~~I~~~~~~~y~~L~~RI~~ 134 (196)
T 4atg_A 58 KEA-EVLKTCIALYFSLIKN-KHVFIDPYLHQILPSLLTCVIGKSIVDD-DVRKMSADIVKYIYDTYSRSYKTLAPRVLK 134 (196)
T ss_dssp TCH-HHHHHHHHHHHHHHHC-TTCCCGGGHHHHHHHHHHHHHCTTCCCH-HHHHHHHHHHHHHHHHHTTTSTTHHHHHHH
T ss_pred CCH-HHHHHHHHHHHHHHcC-CCCChHHHHHHHHHHHHHHHHhcccCHH-HHHHHHHHHHHHHHHHhCccCchHHHHHHH
Confidence 455 5555555554444433 32 5578888888442 1222 89999999999999863 678999999
Q ss_pred HHHHHhcCC--ChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHHHHHHHHHHH
Q 026179 87 VLLAFLRDG--DSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEELWTWMVRFK 143 (242)
Q Consensus 87 ~L~~LL~d~--~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K 143 (242)
++..-+-|+ +..+.=-||.+.+.+=+.+.+.+-. +..+.-|+.+-+.|
T Consensus 135 tl~k~l~dp~~~l~t~YGAi~GL~~lG~~~vr~~ll---------P~l~~~~~~~~~~~ 184 (196)
T 4atg_A 135 TLKGVWMDPNRSEDSQYGALYCLSILSKNVVNTVIR---------EHAEEYKRTIGKKK 184 (196)
T ss_dssp HHHHHHTCTTSCHHHHHHHHHHHHHHCHHHHHTHHH---------HHHHHHHHHTCCHH
T ss_pred HHHHHHcCCCCChHHHHHHHHHHHHhHHHHHHHhhh---------cCHHHHHHHHHHHH
Confidence 999888775 4566667777777777777644432 44555565544443
No 59
>3u0r_A Apoptosis inhibitor 5; heat repeat, armadillo repeat, lysine acetylation; 2.50A {Homo sapiens} PDB: 3v6a_A
Probab=83.51 E-value=7 Score=37.03 Aligned_cols=73 Identities=16% Similarity=0.173 Sum_probs=60.7
Q ss_pred cCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhH
Q 026179 38 SADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFC 112 (242)
Q Consensus 38 ~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~ 112 (242)
..-|++-++-++.++++.-|.+..||++.+.=|-.+|+- ++++++.++|..||..+++.-+..+=.+.-++|+
T Consensus 57 k~FP~l~~~Ai~a~lDLcEDed~~IR~qaik~Lp~~ck~--~~i~kiaDvL~QlLqtdd~~E~~~V~~sL~sllk 129 (507)
T 3u0r_A 57 KHFPELADSAINAQLDLCEDEDVSIRRQAIKELPQFATG--ENLPRVADILTQLLQTDDSAEFNLVNNALLSIFK 129 (507)
T ss_dssp GGCGGGHHHHHHHHHHHHTCSSHHHHHHHHHHGGGGCCT--TCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHH
T ss_pred hhChhhHHHHHHHHHHHHhcccHHHHHHHHHhhHHHhhh--hhhhhHHHHHHHHHhccchHHHHHHHHHHHHHHh
Confidence 457888888888899998899999999999999889977 9999999999999998887665555555555554
No 60
>2db0_A 253AA long hypothetical protein; heat repeats, helical structure, structural genomics; 2.20A {Pyrococcus horikoshii}
Probab=81.67 E-value=16 Score=30.91 Aligned_cols=89 Identities=16% Similarity=0.135 Sum_probs=71.4
Q ss_pred CCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHHHHhcCCChH
Q 026179 19 HGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSSILMPVLLAFLRDGDSG 98 (242)
Q Consensus 19 ~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~~LL~d~~~~ 98 (242)
.+|-..|+..|+=.--+- .++|.+..-|||.++.+-+|++--||-..++-+..+....+. +.+++..-..=++|.+.-
T Consensus 155 skd~~Dkl~aLnFi~alG-en~~~yv~PfLprL~aLL~D~deiVRaSaVEtL~~lA~~npk-lRkii~~kl~e~~D~S~l 232 (253)
T 2db0_A 155 SKNREDKLTALNFIEAMG-ENSFKYVNPFLPRIINLLHDGDEIVRASAVEALVHLATLNDK-LRKVVIKRLEELNDTSSL 232 (253)
T ss_dssp CSSHHHHHHHHHHHHTCC-TTTHHHHGGGHHHHHGGGGCSSHHHHHHHHHHHHHHHTSCHH-HHHHHHHHHHHCCCSCHH
T ss_pred CCChHHHHHHHHHHHHHh-ccCccccCcchHHHHHHHcCcchhhhHHHHHHHHHHHHcCHH-HHHHHHHHHHHhcCcHHH
Confidence 577778999988776665 478888899999999999999999999999999998888777 555555555557788888
Q ss_pred HHHHHHHhhhh
Q 026179 99 VAGKSIVCGTN 109 (242)
Q Consensus 99 V~K~aI~~~~~ 109 (242)
|.|.+..+.+-
T Consensus 233 v~~~V~egL~r 243 (253)
T 2db0_A 233 VNKTVKEGISR 243 (253)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88887766553
No 61
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=81.05 E-value=17 Score=33.05 Aligned_cols=100 Identities=13% Similarity=0.145 Sum_probs=69.8
Q ss_pred HHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCc---h-HHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhH-
Q 026179 7 DQALSLLAAANNHGDLAVKLSSLKQVRGILSSADPS---L-AAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHS- 81 (242)
Q Consensus 7 ~~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~---l-l~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~- 81 (242)
+.++.+|+. +|...|......++.+..++++. + -.+.+|.++++-.+++.++++..+.-+..++...++.-
T Consensus 5 ~~lv~~L~s----~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa~~~~~~k~ 80 (457)
T 1xm9_A 5 PKAVQYLSS----QDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLVFRSTTNKL 80 (457)
T ss_dssp HHHHHHHHS----SCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHHSSCHHHHH
T ss_pred HHHHHHHCC----CCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHH
Confidence 456666653 45568999999999988655441 1 15678888888667788899999888888765433322
Q ss_pred ----HHHHHHHHHHhc-CCChHHHHHHHHhhhhh
Q 026179 82 ----SILMPVLLAFLR-DGDSGVAGKSIVCGTNF 110 (242)
Q Consensus 82 ----~~~v~~L~~LL~-d~~~~V~K~aI~~~~~l 110 (242)
.-.++.|..+|+ ++++.+.+.++-+..++
T Consensus 81 ~i~~~G~i~~Lv~lL~~~~~~~~~~~a~~aL~nL 114 (457)
T 1xm9_A 81 ETRRQNGIREAVSLLRRTGNAEIQKQLTGLLWNL 114 (457)
T ss_dssp HHHHTTCHHHHHHHHTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhhCCCHHHHHHHHHHHHHH
Confidence 234678888888 77888887777666544
No 62
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=80.40 E-value=4.4 Score=35.22 Aligned_cols=30 Identities=20% Similarity=0.121 Sum_probs=27.4
Q ss_pred HHHHHHhcCCChHHHHHHHHhhhhhhHHHH
Q 026179 86 PVLLAFLRDGDSGVAGKSIVCGTNFFCRVL 115 (242)
Q Consensus 86 ~~L~~LL~d~~~~V~K~aI~~~~~lY~~~l 115 (242)
+.+..+++|.|..|-.-|+.|...+|+.+=
T Consensus 210 ~~ia~ll~D~d~~VR~aAl~~lve~y~~~G 239 (266)
T 2of3_A 210 KTVAPFVGDKDVNVRNAAINVLVACFKFEG 239 (266)
T ss_dssp HHHGGGGGCSSHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHhh
Confidence 778888999999999999999999998764
No 63
>3b2a_A TON_1937, putative uncharacterized protein; heat-repeats, hypothetical, unknown function; 2.20A {Thermococcus onnurineus}
Probab=72.61 E-value=10 Score=32.89 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=51.4
Q ss_pred HHHHHHHHHHhhcCCChHHHHHHHHHHHHHHhc-CCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhc
Q 026179 6 RDQALSLLAAANNHGDLAVKLSSLKQVRGILSS-ADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLK 76 (242)
Q Consensus 6 ~~~v~~lln~A~~~~d~~~kl~~L~q~relll~-~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~ 76 (242)
..+|+++|++-..+.|-..|.--|+.+-++.-. .||+.+..++.++=++-...++.++++..+.++++...
T Consensus 148 ~~~V~~~l~sLl~Skd~~vK~agl~~L~eia~~S~D~~i~~~I~~eI~elL~~eD~~l~e~aLd~Le~ils~ 219 (265)
T 3b2a_A 148 SKLVRTYINELVVSPDLYTKVAGFCLFLNMLNSSADSGHLTLILDEIPSLLQNDNEFIVELALDVLEKALSF 219 (265)
T ss_dssp CHHHHHHHHHHHTCSSHHHHHHHHHHHHHHGGGCSSCCCGGGTTTTHHHHHTCSCHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHhCCChhHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHcC
Confidence 456777777777667777777777777777753 37777777777777775555777888888888777654
No 64
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=70.75 E-value=32 Score=32.40 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=69.8
Q ss_pred HHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCc--hH--HhhhHHHHhh-cCCchhhHHHHHHHHHHHHhhchh---
Q 026179 7 DQALSLLAAANNHGDLAVKLSSLKQVRGILSSADPS--LA--AELFPYLVEL-QSSPESLVRKSLIETIEDIGLKAM--- 78 (242)
Q Consensus 7 ~~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~--ll--~~~l~~vl~~-~~d~~~~vrk~~~~fiee~~~~~~--- 78 (242)
..++.+|+ ..|...|...+..+..+..+.... +. ++.++.++.+ ..+.+.++|+..+..|...+....
T Consensus 17 ~~Lv~lL~----~~~~~vr~~A~~~L~~La~~~~~~~~i~~~~~~i~~Lv~~L~~~~~~~~~~~A~~~L~~Ls~~~~~~~ 92 (644)
T 2z6h_A 17 PELTKLLN----DEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTAGTLHNLSHHREGLL 92 (644)
T ss_dssp HHHHHHHT----CSCHHHHHHHHHHHHHHHTSTTHHHHHTTCHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHTTSHHHHH
T ss_pred HHHHHHHc----CCCHHHHHHHHHHHHHHHCCChhHHHHHhccChHHHHHHHHhcCCCHHHHHHHHHHHHHHhcChhhHH
Confidence 34455554 467778888888888888543321 11 3567777765 445578999999999987665321
Q ss_pred h-hHHHHHHHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 79 E-HSSILMPVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 79 e-~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
. .-..+++.|..+|.++++.|.+.|+.+..++-
T Consensus 93 ~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~ 126 (644)
T 2z6h_A 93 AIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLL 126 (644)
T ss_dssp HHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 1 11246788889999999999999998888774
No 65
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=65.23 E-value=20 Score=35.16 Aligned_cols=62 Identities=21% Similarity=0.286 Sum_probs=43.0
Q ss_pred HHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhH
Q 026179 49 PYLVELQSSPESLVRKSLIETIEDIGLKAMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFC 112 (242)
Q Consensus 49 ~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~ 112 (242)
|.+++.=.+++.++|+..+.++... .+.++....++.|..+|.++++.|.+.|+.+..++..
T Consensus 118 ~~lv~~L~~~~~~~r~~a~~~l~~~--~~~~i~~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~ 179 (780)
T 2z6g_A 118 PTNVQRLAEPSQMLKHAVVNLINYQ--DDAELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSK 179 (780)
T ss_dssp --------CCSCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHhcCccHHHHHHHHHHHHhh--hHHHHHhCCHHHHHHHHCCCCHHHHHHHHHHHHHHhC
Confidence 4444332355678899888887643 2345667889999999999999999999999887764
No 66
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=64.97 E-value=41 Score=30.04 Aligned_cols=89 Identities=15% Similarity=0.138 Sum_probs=59.2
Q ss_pred CChHHHHHHHHHHHHHHhcCCCc--hH-HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhh---h--HHHHHHHHHHH
Q 026179 20 GDLAVKLSSLKQVRGILSSADPS--LA-AELFPYLVELQSSPESLVRKSLIETIEDIGLKAME---H--SSILMPVLLAF 91 (242)
Q Consensus 20 ~d~~~kl~~L~q~relll~~~p~--ll-~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e---~--~~~~v~~L~~L 91 (242)
+|...+......++++..+.++. +. .+.+|.++++-.+++.++++..+..+..++....+ . -...++.|..+
T Consensus 72 ~~~~~~~~a~~~L~~ls~~~~~~~~i~~~g~i~~L~~lL~~~~~~v~~~a~~~L~~l~~~~~~~~~~i~~~g~i~~L~~l 151 (529)
T 1jdh_A 72 NDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVAL 151 (529)
T ss_dssp CCHHHHHHHHHHHHHHTTSHHHHHHHHHTTHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHCTTHHHHHHHHTHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHHHcCchhHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCcchHHHHHHcCCHHHHHHH
Confidence 46666777777777765432210 11 34677787776677789999999999988764322 1 24577888899
Q ss_pred hcCCChHHHHHHHHhhh
Q 026179 92 LRDGDSGVAGKSIVCGT 108 (242)
Q Consensus 92 L~d~~~~V~K~aI~~~~ 108 (242)
|.++++.+...+..+.+
T Consensus 152 l~~~~~~~~~~~~~~L~ 168 (529)
T 1jdh_A 152 LNKTNVKFLAITTDCLQ 168 (529)
T ss_dssp GGCCCHHHHHHHHHHHH
T ss_pred HhcCCHHHHHHHHHHHH
Confidence 98888777665544443
No 67
>1jdh_A Beta-catenin; beta-catenin, protein-protein complex, transcription; 1.90A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qz7_A 1g3j_A 1th1_A* 1i7w_A* 1i7x_A 1jpp_A 1m1e_A 1v18_A* 3oux_A 3ouw_A 1jpw_A 3tx7_A* 2gl7_A 1t08_A 1luj_A 2bct_A 3bct_A* 3ifq_A* 3sla_A 3sl9_A
Probab=64.37 E-value=70 Score=28.46 Aligned_cols=87 Identities=13% Similarity=0.106 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHhcCC-CchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhH-----HHHHHHHHHHhcC--C
Q 026179 24 VKLSSLKQVRGILSSAD-PSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHS-----SILMPVLLAFLRD--G 95 (242)
Q Consensus 24 ~kl~~L~q~relll~~~-p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~-----~~~v~~L~~LL~d--~ 95 (242)
.+...+.-+..+.-+.. .....+++|.++.+-.+.+.++|...+..+..++...++.. ...++.|..+|.+ +
T Consensus 243 ~~~~a~~~L~~l~~~~~~~~~~~~~i~~L~~ll~~~~~~v~~~a~~~L~~L~~~~~~~~~~~~~~~~v~~L~~ll~~~~~ 322 (529)
T 1jdh_A 243 LVQNCLWTLRNLSDAATKQEGMEGLLGTLVQLLGSDDINVVTCAAGILSNLTCNNYKNKMMVCQVGGIEALVRTVLRAGD 322 (529)
T ss_dssp HHHHHHHHHHHHHTTCTTCSCCHHHHHHHHHHTTCSCHHHHHHHHHHHHHHTTTCHHHHHHHHHTTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhcCChhhHHHHhHHHHHHHHHcCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHcCChHHHHHHHHccCC
Confidence 33344444444443221 12235677777777667788888888888888766433211 2245566666653 3
Q ss_pred ChHHHHHHHHhhhhh
Q 026179 96 DSGVAGKSIVCGTNF 110 (242)
Q Consensus 96 ~~~V~K~aI~~~~~l 110 (242)
++.|...++.+.+++
T Consensus 323 ~~~v~~~a~~~L~nl 337 (529)
T 1jdh_A 323 REDITEPAICALRHL 337 (529)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 467777777777665
No 68
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=63.95 E-value=43 Score=28.61 Aligned_cols=60 Identities=8% Similarity=0.197 Sum_probs=47.1
Q ss_pred HhhhHHHHh-hcCCchhhHHHHHHHHHHHHhh-chhhhHHHHHHHHHHHhcCCChHHHHHHHHhh
Q 026179 45 AELFPYLVE-LQSSPESLVRKSLIETIEDIGL-KAMEHSSILMPVLLAFLRDGDSGVAGKSIVCG 107 (242)
Q Consensus 45 ~~~l~~vl~-~~~d~~~~vrk~~~~fiee~~~-~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~ 107 (242)
++.||-+.+ +..|.+=.||-+++..+.+.|. .+++- +++.+.....|+++-|-|-|+.+.
T Consensus 102 ~~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~pe~---~l~~~~~W~~d~n~~VRR~Ase~~ 163 (240)
T 3l9t_A 102 KEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEYKK---ALPIIDEWLKSSNLHTRRAATEGL 163 (240)
T ss_dssp HHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCTTT---THHHHHHHHHCSSHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCHHH---HHHHHHHHhcCCCHHHHHHHHHhh
Confidence 678887776 7778888999999999999996 67764 334566677899999988888775
No 69
>2z6h_A Catenin beta-1, beta-catenin; C-terminal domain, activator, alternative splicing, cell adhesion, cytoplasm, cytoskeleton, disease mutation, nucleus; 2.20A {Homo sapiens}
Probab=63.55 E-value=35 Score=32.14 Aligned_cols=90 Identities=14% Similarity=0.122 Sum_probs=60.2
Q ss_pred CChHHHHHHHHHHHHHHhcCCCc--hH-HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhh----h-HHHHHHHHHHH
Q 026179 20 GDLAVKLSSLKQVRGILSSADPS--LA-AELFPYLVELQSSPESLVRKSLIETIEDIGLKAME----H-SSILMPVLLAF 91 (242)
Q Consensus 20 ~d~~~kl~~L~q~relll~~~p~--ll-~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e----~-~~~~v~~L~~L 91 (242)
.+...+......++.+..+.++. +. .+.+|.++++-.+++..+|+..+..|..++....+ + -...++.|..+
T Consensus 69 ~~~~~~~~A~~~L~~Ls~~~~~~~~i~~~g~i~~Lv~lL~~~~~~v~~~A~~aL~nL~~~~~~~~~~v~~~g~i~~Lv~l 148 (644)
T 2z6h_A 69 NDVETARCTAGTLHNLSHHREGLLAIFKSGGIPALVKMLGSPVDSVLFYAITTLHNLLLHQEGAKMAVRLAGGLQKMVAL 148 (644)
T ss_dssp CCHHHHHHHHHHHHHHTTSHHHHHHHHTTTHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHSTTHHHHHHHTTHHHHHHHG
T ss_pred CCHHHHHHHHHHHHHHhcChhhHHHHHHcCCHHHHHHHHhCCCHHHHHHHHHHHHHHHhCcchhHHHHHHCCChHHHHHH
Confidence 46667777777777665432210 11 34677787776677889999999999998764322 2 24678888899
Q ss_pred hcCCChHHHHHHHHhhhh
Q 026179 92 LRDGDSGVAGKSIVCGTN 109 (242)
Q Consensus 92 L~d~~~~V~K~aI~~~~~ 109 (242)
|.++++.+...+..+.++
T Consensus 149 L~~~~~~~~~~a~~~L~~ 166 (644)
T 2z6h_A 149 LNKTNVKFLAITTDCLQI 166 (644)
T ss_dssp GGCCCHHHHHHHHHHHHH
T ss_pred HCcCCHHHHHHHHHHHHH
Confidence 998888766655444433
No 70
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A
Probab=61.50 E-value=93 Score=30.79 Aligned_cols=102 Identities=7% Similarity=0.036 Sum_probs=56.7
Q ss_pred hHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhch-------
Q 026179 5 SRDQALSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKA------- 77 (242)
Q Consensus 5 ~~~~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~------- 77 (242)
..+++.++|.++.+ +|...+ .-.+++++ .+.|.+...++. ++. ..+.+.++|.+.+-.+....+++
T Consensus 3 d~~~l~~~L~~~~s-pd~~~r--Ae~~L~~~--~~~p~~~~~L~~-il~-~~~~~~~vR~~A~i~lkn~i~~~w~~~~~~ 75 (960)
T 1wa5_C 3 DLETVAKFLAESVI-ASTAKT--SERNLRQL--ETQDGFGLTLLH-VIA-STNLPLSTRLAGALFFKNFIKRKWVDENGN 75 (960)
T ss_dssp HHHHHHHHHHHTTS-GGGHHH--HHHHHHHH--HTSTTHHHHHHH-HHH-CTTSCHHHHHHHHHHHHHHHHHHSBCSSSC
T ss_pred cHHHHHHHHHHhcC-CCHHHH--HHHHHHHh--hcCCCHHHHHHH-HHh-cCCCCHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 56789999998665 454444 33444443 467755433333 221 23345678888877776654321
Q ss_pred ----hhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhHH
Q 026179 78 ----MEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFCR 113 (242)
Q Consensus 78 ----~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~ 113 (242)
++--..+=..|...+.++++.|.+++-++.+.|.+.
T Consensus 76 ~~l~~~~k~~ik~~ll~~l~~~~~~ir~~l~~~ia~ia~~ 115 (960)
T 1wa5_C 76 HLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADS 115 (960)
T ss_dssp BSSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 122222233344444455677777777777776554
No 71
>3l9t_A Putative uncharacterized protein SMU.31; hypothetical protein, unknown function; HET: EPE; 2.21A {Streptococcus mutans}
Probab=60.12 E-value=61 Score=27.65 Aligned_cols=111 Identities=13% Similarity=0.062 Sum_probs=67.6
Q ss_pred HHHHHHHHhhcCCChHHHHHHHHH---------HHHH--------HhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHH
Q 026179 8 QALSLLAAANNHGDLAVKLSSLKQ---------VRGI--------LSSADPSLAAELFPYLVELQSSPESLVRKSLIETI 70 (242)
Q Consensus 8 ~v~~lln~A~~~~d~~~kl~~L~q---------~rel--------ll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fi 70 (242)
-++.+|.++ . .+ ++.+..++. +||. +...+| +..++.+.+...|++..|||++++.+
T Consensus 90 ~Av~lLg~~-~-~~-~~~L~~ir~~va~D~~WrVre~lA~a~~~~~~~~~p---e~~l~~~~~W~~d~n~~VRR~Ase~~ 163 (240)
T 3l9t_A 90 YAVFLFGYL-S-KD-KEILIFMRDEVSKDNNWRVQEVLAKAFDEFCKKIEY---KKALPIIDEWLKSSNLHTRRAATEGL 163 (240)
T ss_dssp HHHHHHHHT-T-TS-HHHHHHHHHTGGGCSCHHHHHHHHHHHHHHHHHHCT---TTTHHHHHHHHHCSSHHHHHHHHHHT
T ss_pred HHHHHHHhc-c-Cc-HHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCH---HHHHHHHHHHhcCCCHHHHHHHHHhh
Confidence 346677766 2 33 467777766 5555 322455 23556666777899999999999886
Q ss_pred HHHhhc--hhhhHHHHHHHHHHHhcCCChHHHHHHHHhhh---hhhHHHHHHHhhhhhc
Q 026179 71 EDIGLK--AMEHSSILMPVLLAFLRDGDSGVAGKSIVCGT---NFFCRVLEEITMQFRW 124 (242)
Q Consensus 71 ee~~~~--~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~---~lY~~~l~~~~~~~~~ 124 (242)
.--|+. ..+.-..+++.|..+..|++-.|.|.+--... --+|......+.+|..
T Consensus 164 rpW~~~~~~k~dp~~ll~iL~~L~~D~s~yVrKSVan~LrD~SK~~Pd~V~~~~~~w~~ 222 (240)
T 3l9t_A 164 RIWTNRPYFKENPNEAIRRIADLKEDVSEYVRKSVGNALRDISKKFPDLVKIELKNWKL 222 (240)
T ss_dssp CSGGGSTTTTTCHHHHHHHHHTTTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTCCC
T ss_pred HHHhccchhhcCHHHHHHHHHHhcCChHHHHHHHHHHHHHHHhhhCHHHHHHHHHHhhc
Confidence 432322 11233345556666778888888776655553 3456666555666643
No 72
>2z6g_A B-catenin; FULL-length, beta-catenin, cell adhesion; 3.40A {Danio rerio}
Probab=59.59 E-value=19 Score=35.29 Aligned_cols=70 Identities=16% Similarity=0.203 Sum_probs=51.0
Q ss_pred CchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchh---hh--HHHHHHHHHHHhcC-CChHHHHHHHHhhhhh
Q 026179 41 PSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAM---EH--SSILMPVLLAFLRD-GDSGVAGKSIVCGTNF 110 (242)
Q Consensus 41 p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~---e~--~~~~v~~L~~LL~d-~~~~V~K~aI~~~~~l 110 (242)
+.+....+|.++.+-.+.+..+|+..+..|..++.... .. ...+++.|..+|++ +++.+.+.|+.+..++
T Consensus 145 ~~i~~g~ip~Lv~lL~~~d~~vr~~A~~~L~~L~~~~~~~~~i~~~~~~i~~Lv~~L~~~~d~~vr~~Aa~aL~~L 220 (780)
T 2z6g_A 145 AELATRAIPELTKLLNDEDQVVVNKAAVMVHQLSKKEASRHAIMRSPQMVSAIVRTMQNTNDVETARCTSGTLHNL 220 (780)
T ss_dssp HHHHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHTSHHHHHHHTTCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHCCCCHHHHHHHHHHHHHHhCCChhHHHHHhccChHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 34457778888877557788999999999998876432 11 23577777777764 4888988888887664
No 73
>3opb_A SWI5-dependent HO expression protein 4; heat and arm fold, myosin folding and function, myosin bindi protein, protein binding; 2.90A {Saccharomyces cerevisiae}
Probab=53.48 E-value=1.8e+02 Score=29.01 Aligned_cols=132 Identities=9% Similarity=0.071 Sum_probs=88.2
Q ss_pred HHHHHHHHHHHHHhcCCC-------chHH--hhhHHHHhhcCCchhhHHHHHHHHHHHHhhchh----hhH----HH---
Q 026179 24 VKLSSLKQVRGILSSADP-------SLAA--ELFPYLVELQSSPESLVRKSLIETIEDIGLKAM----EHS----SI--- 83 (242)
Q Consensus 24 ~kl~~L~q~relll~~~p-------~ll~--~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~----e~~----~~--- 83 (242)
++.+.|..+.+|+...++ .++. +.+|.+.++-.+.+..+||-.++.|.-.+.... ++. ++
T Consensus 575 ~~feAL~ALTNLAs~~~n~~E~~r~~Ii~~~ga~~~L~~LL~s~n~~VrrAA~elI~NL~~~~e~i~~k~~~~~~~~~~~ 654 (778)
T 3opb_A 575 DNYEALLALTNLASSETSDGEEVCKHIVSTKVYWSTIENLMLDENVPLQRSTLELISNMMSHPLTIAAKFFNLENPQSLR 654 (778)
T ss_dssp HHHHHHHHHHHHHHCCSHHHHHHHHHHHHSHHHHHHHHHGGGCSSHHHHHHHHHHHHHHHTSGGGTGGGTSCCSSHHHHH
T ss_pred HHHHHHHHHHHHhcCCcccchHHHHHHHHhcCHHHHHHHHHhCCCHHHHHHHHHHHHHHhCCcHHHHHHHHhhcCchhhc
Confidence 577888888888865421 2454 488888888777888999999888877654222 221 22
Q ss_pred HHHHHHHHhcCCChHHHHHHHHhhhhh---hHHHHHHHhhhhhccCCccchHHHHHHHHHHHHHHHHHHhcc-CCCCchH
Q 026179 84 LMPVLLAFLRDGDSGVAGKSIVCGTNF---FCRVLEEITMQFRWHGKVERWLEELWTWMVRFKDAVFAIALE-PGLVGTK 159 (242)
Q Consensus 84 ~v~~L~~LL~d~~~~V~K~aI~~~~~l---Y~~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K~~Il~~~~d-~~n~Gvr 159 (242)
-++.|..|++.+|..+.+.|.-+.+++ ++.+- +++... . ..-+.++.++-+ .+++|+|
T Consensus 655 rL~lLV~Ll~s~D~~~r~AAagALAnLts~~~~ia-----~~ll~~------~-------~gi~~Ll~lL~~~~~~~~l~ 716 (778)
T 3opb_A 655 NFNILVKLLQLSDVESQRAVAAIFANIATTIPLIA-----KELLTK------K-------ELIENAIQVFADQIDDIELR 716 (778)
T ss_dssp HHHHHHHGGGCSCHHHHHHHHHHHHHHHHHCHHHH-----HHHTTC------H-------HHHHHHHHHHHHTTTCHHHH
T ss_pred cHHHHHHHHcCCCHHHHHHHHHHHHHhcCCChHHH-----HHHHHc------c-------ccHHHHHHHHhccCCCHHHH
Confidence 266787888888999988888777665 56666 444321 1 233344442222 4899999
Q ss_pred HHHHHHHhHHhhhc
Q 026179 160 LLALKFLETHVLLF 173 (242)
Q Consensus 160 ~~aiKF~e~vIl~q 173 (242)
-.++.++--++-..
T Consensus 717 ~R~~~~l~NL~~~~ 730 (778)
T 3opb_A 717 QRLLMLFFGLFEVI 730 (778)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999987776444
No 74
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=51.90 E-value=32 Score=30.46 Aligned_cols=66 Identities=11% Similarity=0.056 Sum_probs=45.0
Q ss_pred hhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhh---H--HHHHHHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 46 ELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEH---S--SILMPVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 46 ~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~---~--~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
+.+|.++++-.+.+.++++-.+..|..++...++. + .-+++.|..||++.++.+.+.|..+..++.
T Consensus 263 g~i~~Lv~lL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~i~~Lv~LL~s~~~~i~~~A~~aL~nL~ 333 (354)
T 3nmw_A 263 NCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNLM 333 (354)
T ss_dssp THHHHHHHHTTCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHTTHHHHHHTTTTCSSHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHcCCChHHHHHHHHHHHHHhCCCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 45677776655677788888888888877443322 2 234778888888888888777766665543
No 75
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=50.69 E-value=79 Score=31.56 Aligned_cols=175 Identities=7% Similarity=-0.022 Sum_probs=107.5
Q ss_pred ChHHHHHHHHHHHHHHhcCCC---chH-HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchh---hhH--HHHHHHHHHH
Q 026179 21 DLAVKLSSLKQVRGILSSADP---SLA-AELFPYLVELQSSPESLVRKSLIETIEDIGLKAM---EHS--SILMPVLLAF 91 (242)
Q Consensus 21 d~~~kl~~L~q~relll~~~p---~ll-~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~---e~~--~~~v~~L~~L 91 (242)
+...+.+.|..+..+.-+.+. .+. ...+|.++++..+.+..||+-.++.|..++.... ++. ...++.|..|
T Consensus 594 ~~l~~~eAl~AL~NLa~~~d~~~~~Ii~aG~l~~Lv~LL~s~~~~Vq~~A~~~L~NLa~~~~~~~~~v~~~g~l~~Lv~L 673 (810)
T 3now_A 594 TALENFESLMALTNLASMNESVRQRIIKEQGVSKIEYYLMEDHLYLTRAAAQCLCNLVMSEDVIKMFEGNNDRVKFLALL 673 (810)
T ss_dssp CHHHHHHHHHHHHHHTTSCHHHHHHHHHTTHHHHHHHHHHSCCTTHHHHHHHHHHHHTTSHHHHHHHHSSSSHHHHHHHG
T ss_pred cHHHHHHHHHHHHHHhcCCHHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHhCChHHHHHHHhccCcHHHHHHH
Confidence 333456677777777743211 111 3578888888777788999999999988775322 233 3577888899
Q ss_pred hcCCChHHHHHHHHhhhhhhH---HHHHHHhhhhhccCCccchHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHhH
Q 026179 92 LRDGDSGVAGKSIVCGTNFFC---RVLEEITMQFRWHGKVERWLEELWTWMVRFKDAVFAIALEPGLVGTKLLALKFLET 168 (242)
Q Consensus 92 L~d~~~~V~K~aI~~~~~lY~---~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K~~Il~~~~d~~n~Gvr~~aiKF~e~ 168 (242)
+..++..+.|.|..+.+++-. ..- +.++.. .- .-..++. ++.+++..+|-.|...+..
T Consensus 674 L~s~d~~vq~~Aa~ALanLt~~s~~~~-----~~ii~~-------~g------~I~~Lv~-LL~s~d~~vq~~A~~aL~N 734 (810)
T 3now_A 674 CEDEDEETATACAGALAIITSVSVKCC-----EKILAI-------AS------WLDILHT-LIANPSPAVQHRGIVIILN 734 (810)
T ss_dssp GGCSSHHHHHHHHHHHHHHHHHCHHHH-----HHHHTS-------TT------HHHHHHH-HHTCSSHHHHHHHHHHHHH
T ss_pred hcCCCHHHHHHHHHHHHHHhCCCHHHH-----HHHHHH-------cC------CHHHHHH-HHCCCCHHHHHHHHHHHHH
Confidence 999999999999998888754 233 222210 00 1124455 6688999999998877765
Q ss_pred HhhhccCCCCCcccccccCCCccccccccCCCCCCC-----ChhhHHHHHHHHHHHHHHHHh
Q 026179 169 HVLLFTSDSNDFENFTKEGSKQTFNISWLSGGHPFL-----DPVSLTSEANRMLGTLMDLLQ 225 (242)
Q Consensus 169 vIl~qT~~~~d~~~~~~~~~~~d~sl~~vP~~Hp~l-----~~~~Le~Ea~~lL~~LL~~l~ 225 (242)
+.- .+ ++ .... -..-+-+|+=..++ +..+.-+-|.+.|+.++++=.
T Consensus 735 L~~-~s-----~e-~~~~----l~e~G~i~~L~~LL~~~d~~~~~i~e~Al~aL~~ll~~g~ 785 (810)
T 3now_A 735 MIN-AG-----EE-IAKK----LFETDIMELLSGLGQLPDDTRAKAREVATQCLAAAERYRI 785 (810)
T ss_dssp HHT-TC-----HH-HHHH----HHTSTHHHHHTTSCCCTTSTTHHHHHHHHHHHHHHHHHHT
T ss_pred HHh-CC-----HH-HHHH----HHHCCCHHHHHHHHhCcccCcHHHHHHHHHHHHHHHhCCC
Confidence 432 11 11 1010 12223344444444 235677778888888887755
No 76
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=50.13 E-value=51 Score=27.55 Aligned_cols=64 Identities=13% Similarity=0.001 Sum_probs=44.8
Q ss_pred hhHHHHhhcCCchh--hHHHHHHHHHHHHhhchhh----h-HHHHHHHHHHHhcCCChHHHHHHHHhhhhh
Q 026179 47 LFPYLVELQSSPES--LVRKSLIETIEDIGLKAME----H-SSILMPVLLAFLRDGDSGVAGKSIVCGTNF 110 (242)
Q Consensus 47 ~l~~vl~~~~d~~~--~vrk~~~~fiee~~~~~~e----~-~~~~v~~L~~LL~d~~~~V~K~aI~~~~~l 110 (242)
-+|.++++-.+++. .++...+.+|.-.|+.+++ . -...++.|..+|+.+++.+.+.|+-+..++
T Consensus 9 ~i~~lV~lL~s~~~~~~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nL 79 (233)
T 3tt9_A 9 TLERAVSMLEADHMLPSRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNL 79 (233)
T ss_dssp CHHHHHHTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHhCCCCchHHHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHH
Confidence 35666666334444 7888888888777765432 1 234678899999998999998888887776
No 77
>1xm9_A Plakophilin 1; armadillo repeat, cell adhesion; 2.80A {Homo sapiens} SCOP: a.118.1.24
Probab=49.23 E-value=24 Score=31.95 Aligned_cols=64 Identities=16% Similarity=0.056 Sum_probs=44.4
Q ss_pred hHHHHhhcCCchhhHHHHHHHHHHHHhhchhh-----hHHHHHHHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 48 FPYLVELQSSPESLVRKSLIETIEDIGLKAME-----HSSILMPVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 48 l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e-----~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
+|.++.+-.+++.+++...+..|..+|..+++ .-...++.|..+|+.+++.+.+.|+.+..++.
T Consensus 4 l~~lv~~L~s~~~~~q~~A~~~L~~l~~~~~~~~~~i~~~g~i~~Lv~lL~s~~~~~~~~A~~aL~nLa 72 (457)
T 1xm9_A 4 IPKAVQYLSSQDEKYQAIGAYYIQHTCFQDESAKQQVYQLGGICKLVDLLRSPNQNVQQAAAGALRNLV 72 (457)
T ss_dssp HHHHHHHHHSSCTHHHHHHHHHHHHHTSSCSSHHHHHHHTTHHHHHHHHTTSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHh
Confidence 34455443345677888888888888754332 12345777888888888888888888887775
No 78
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=48.80 E-value=2e+02 Score=28.03 Aligned_cols=106 Identities=9% Similarity=-0.015 Sum_probs=59.6
Q ss_pred chHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhch-----h
Q 026179 4 VSRDQALSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKA-----M 78 (242)
Q Consensus 4 ~~~~~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~-----~ 78 (242)
..-+++.++|+.....+|...|-+.-++++++ .++|... .++..++. .+.+.++|-|.+..+....+++ +
T Consensus 21 ~~~~~l~~~l~~l~~~~~~~~r~~A~~~L~~~--~~~p~~~-~~~~~lL~--~~~~~~vr~~aa~~L~~~i~~~w~~l~~ 95 (963)
T 2x19_B 21 FTVENVEKALHQLYYDPNIENKNLAQKWLMQA--QVSPQAW-HFSWQLLQ--PDKVPEIQYFGASALHIKISRYWSDIPT 95 (963)
T ss_dssp CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH--HHSTTHH-HHHHHHTS--TTSCHHHHHHHHHHHHHHHHHCGGGSCG
T ss_pred hhHHHHHHHHHHHhcCCCHHHHHHHHHHHHHH--hcCHHHH-HHHHHHhc--CCCchHHHHHHHHHHHHHHHhCHHhCCH
Confidence 45677888888866666765555444444442 2466543 23444543 4567899999999998765432 1
Q ss_pred hhHHHHHHHHHHHhcC---CChHHHHHHHHhhhhhhHHH
Q 026179 79 EHSSILMPVLLAFLRD---GDSGVAGKSIVCGTNFFCRV 114 (242)
Q Consensus 79 e~~~~~v~~L~~LL~d---~~~~V~K~aI~~~~~lY~~~ 114 (242)
+--..+-..|..++.. ..+.|..+..++.+.|.+.-
T Consensus 96 ~~~~~ir~~ll~~l~~~~~~~~~ir~kl~~~la~i~~~~ 134 (963)
T 2x19_B 96 DQYESLKAQLFTQITRFASGSKIVLTRLCVALASLALSM 134 (963)
T ss_dssp GGHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 1112222222222222 34677777777777766543
No 79
>2npp_B PP2A, B subunit, serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; heat repeat, signaling protein, hydrolase-hydrolase inhibito; HET: 1ZN; 3.30A {Homo sapiens} SCOP: a.118.1.20
Probab=45.85 E-value=1.8e+02 Score=27.00 Aligned_cols=79 Identities=15% Similarity=0.109 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHH--HHHHHHHHhhc-hhhhHHHHHH----HHHHHhcCCChHH
Q 026179 27 SSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKS--LIETIEDIGLK-AMEHSSILMP----VLLAFLRDGDSGV 99 (242)
Q Consensus 27 ~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~--~~~fiee~~~~-~~e~~~~~v~----~L~~LL~d~~~~V 99 (242)
.+|...-...+++||++...++.+++- +.|-..-.|. ..+.|++++.. .++-..+++. .+..-+..+.-.|
T Consensus 265 ~qL~ycv~qf~eKDp~L~~~vi~~LLk--~WP~tns~KevlFL~eleeile~~~~~ef~~i~~~lF~~la~ci~S~hfqV 342 (449)
T 2npp_B 265 PQLAYCVVQFLEKDSTLTEPVVMALLK--YWPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQV 342 (449)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHH--TCCSSCHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHTCSCHHH
T ss_pred HHHHHHHHHHHhcCcHhHHHHHHHHHH--hCCCCCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 466666666678999999999999976 4444334443 34555555532 2222222222 2333345566677
Q ss_pred HHHHHHhh
Q 026179 100 AGKSIVCG 107 (242)
Q Consensus 100 ~K~aI~~~ 107 (242)
+.+|+...
T Consensus 343 AErAL~~w 350 (449)
T 2npp_B 343 AERALYYW 350 (449)
T ss_dssp HHHHHGGG
T ss_pred HHHHHHHH
Confidence 76665543
No 80
>3l6x_A Catenin delta-1; catenin, armadillo, ARM, JMD, CE adhesion, complex, cell-CELL adhesion, ARVCF, delta-catenin DP120, JAC-1, cell membrane, membrane; 2.40A {Homo sapiens} PDB: 3l6y_A
Probab=45.64 E-value=40 Score=32.33 Aligned_cols=72 Identities=13% Similarity=0.115 Sum_probs=54.4
Q ss_pred CCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhh-----HHHHHHHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 40 DPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEH-----SSILMPVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 40 ~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~-----~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
+..+-+.-+|.++++-.+.+.+++...+..|..+|+...+. -...++.|..+|..+++.|...|+-+..+|=
T Consensus 42 ~~~~~~~~i~~LV~~L~s~~~~~q~~Aa~~L~~La~~~~~~k~~V~~~G~Ip~LV~LL~s~~~~vq~~Aa~AL~nLa 118 (584)
T 3l6x_A 42 PPNWRQPELPEVIAMLGFRLDAVKSNAAAYLQHLCYRNDKVKTDVRKLKGIPVLVGLLDHPKKEVHLGACGALKNIS 118 (584)
T ss_dssp CCCCCCCCHHHHHHHTTCSCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHGGGCSSHHHHHHHHHHHHHHT
T ss_pred CCCcccccHHHHHHHHCCCCHHHHHHHHHHHHHHHcCChHHHHHHHHcCCcHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 44555666788887755677889999999998888754332 2346788999999999999998888886653
No 81
>4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} PDB: 4b4t_N
Probab=45.01 E-value=1.5e+02 Score=30.37 Aligned_cols=103 Identities=12% Similarity=0.100 Sum_probs=60.3
Q ss_pred cchHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHh--cCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhh
Q 026179 3 AVSRDQALSLLAAANNHGDLAVKLSSLKQVRGILS--SADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEH 80 (242)
Q Consensus 3 ~~~~~~v~~lln~A~~~~d~~~kl~~L~q~relll--~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~ 80 (242)
.+.+++++++|-+.....+. .-...-.-+=-++. ..++..+..++..+.+ +.+..+||+.+-=|..++..+++.
T Consensus 467 GS~~eev~e~L~~~L~dd~~-~~~~~AalALGli~vGTgn~~ai~~LL~~~~e---~~~e~vrR~aalgLGll~~g~~e~ 542 (963)
T 4ady_A 467 GSANIEVYEALKEVLYNDSA-TSGEAAALGMGLCMLGTGKPEAIHDMFTYSQE---TQHGNITRGLAVGLALINYGRQEL 542 (963)
T ss_dssp TCCCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHH---CSCHHHHHHHHHHHHHHTTTCGGG
T ss_pred CCCCHHHHHHHHHHHhcCCH-HHHHHHHHHHhhhhcccCCHHHHHHHHHHHhc---cCcHHHHHHHHHHHHhhhCCChHH
Confidence 35567777777777764442 11111111112221 1244444555554433 345689999999898888888888
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHhhhhhhH
Q 026179 81 SSILMPVLLAFLRDGDSGVAGKSIVCGTNFFC 112 (242)
Q Consensus 81 ~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~ 112 (242)
+..++..|. .+++|.|-..++.+.+..|.
T Consensus 543 ~~~li~~L~---~~~dp~vRygaa~alglAya 571 (963)
T 4ady_A 543 ADDLITKML---ASDESLLRYGGAFTIALAYA 571 (963)
T ss_dssp GHHHHHHHH---HCSCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHH---hCCCHHHHHHHHHHHHHHhc
Confidence 877665544 57788777776666654443
No 82
>3now_A UNC-45 protein, SD10334P; armadillo repeat, HSP90, myosin, tetra-tricopeptide repeat, binding protein required for myosin function; 2.99A {Drosophila melanogaster}
Probab=44.74 E-value=74 Score=31.76 Aligned_cols=66 Identities=14% Similarity=0.141 Sum_probs=49.4
Q ss_pred hhhHHHHhhcCCchhhHHHHHHHHHHHHhhc-h--hh-hH--HHHHHHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 46 ELFPYLVELQSSPESLVRKSLIETIEDIGLK-A--ME-HS--SILMPVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 46 ~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~-~--~e-~~--~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
+.+|.++.+-...+.++|+-.+..|.-++.. . .+ .+ ...++.|..||.++|..+.++|..+..++-
T Consensus 665 g~l~~Lv~LL~s~d~~vq~~Aa~ALanLt~~s~~~~~~ii~~~g~I~~Lv~LL~s~d~~vq~~A~~aL~NL~ 736 (810)
T 3now_A 665 DRVKFLALLCEDEDEETATACAGALAIITSVSVKCCEKILAIASWLDILHTLIANPSPAVQHRGIVIILNMI 736 (810)
T ss_dssp SHHHHHHHGGGCSSHHHHHHHHHHHHHHHHHCHHHHHHHHTSTTHHHHHHHHHTCSSHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHhcCCCHHHHHHHHHHHHHHhCCCHHHHHHHHHHcCCHHHHHHHHCCCCHHHHHHHHHHHHHHH
Confidence 3455566665556778999999999887652 1 22 22 358889999999999999999999888764
No 83
>3nmz_A APC variant protein; protein-protein complex, armadillo repeats, cell adhesion-CE complex; 3.01A {Homo sapiens}
Probab=43.19 E-value=51 Score=30.39 Aligned_cols=65 Identities=11% Similarity=0.049 Sum_probs=46.0
Q ss_pred hhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhh---H--HHHHHHHHHHhcCCChHHHHHHHHhhhhh
Q 026179 46 ELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEH---S--SILMPVLLAFLRDGDSGVAGKSIVCGTNF 110 (242)
Q Consensus 46 ~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~---~--~~~v~~L~~LL~d~~~~V~K~aI~~~~~l 110 (242)
+.+|.++++-.+.+.++++..+..|..++...++. + .-+++.|..||...++.+.+.|..+..+|
T Consensus 379 G~i~~Lv~LL~~~~~~v~~~A~~aL~nLa~~~~~~~~~i~~~G~I~~Lv~LL~s~~~~v~~~Aa~AL~nL 448 (458)
T 3nmz_A 379 NCLQTLLQHLKSHSLTIVSNACGTLWNLSARNPKDQEALWDMGAVSMLKNLIHSKHKMIAMGSAAALRNL 448 (458)
T ss_dssp THHHHHHHHSSCSCHHHHHHHHHHHHHHHSSCHHHHHHHHHHTHHHHHHTTTTCSSHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHcCCChHHHHHHHHHHHHHHcCCHHHHHHHHHCCCHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 46777777766677788888888888877433322 2 23477888888888888888777766655
No 84
>2of3_A ZYG-9; multifunctional macromolecule, kinetochore, microtubule, XMAP215, STU2, DIS1, microtubule associated protein, structural protein; 1.90A {Caenorhabditis elegans}
Probab=37.92 E-value=1.8e+02 Score=24.81 Aligned_cols=73 Identities=12% Similarity=0.050 Sum_probs=56.9
Q ss_pred chHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhh---HHHHhhcCCchhhHHHHHHHHHHHHhhch
Q 026179 4 VSRDQALSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELF---PYLVELQSSPESLVRKSLIETIEDIGLKA 77 (242)
Q Consensus 4 ~~~~~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l---~~vl~~~~d~~~~vrk~~~~fiee~~~~~ 77 (242)
.+..++.+.+-++-.+.+.-.+.+.|..+..++-..... ....+ |.+..+-.|++..||.....-+.|+.+..
T Consensus 163 ~~~~~v~~~l~~g~ksKN~R~R~e~l~~l~~li~~~G~~-~~~~l~~~~~ia~ll~D~d~~VR~aAl~~lve~y~~~ 238 (266)
T 2of3_A 163 VGPLKMTPMLLDALKSKNARQRSECLLVIEYYITNAGIS-PLKSLSVEKTVAPFVGDKDVNVRNAAINVLVACFKFE 238 (266)
T ss_dssp HCHHHHHHHHHHGGGCSCHHHHHHHHHHHHHHHHHHCSG-GGGGGCHHHHHGGGGGCSSHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHhcCCC-ccccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHh
Confidence 345667777777777888889999999999988654444 35678 88888888999999999999998876543
No 85
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=35.67 E-value=62 Score=32.51 Aligned_cols=70 Identities=10% Similarity=0.136 Sum_probs=43.2
Q ss_pred hHHhhhHHHHhhcC-----CchhhHHH---HHHHHHHHHhhchhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhH
Q 026179 43 LAAELFPYLVELQS-----SPESLVRK---SLIETIEDIGLKAMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFC 112 (242)
Q Consensus 43 ll~~~l~~vl~~~~-----d~~~~vrk---~~~~fiee~~~~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~ 112 (242)
+++++++.++.+.. ++.+.+|. |+.+=+.+....+++++..+++.+...+.|.++.|.-.|..++..+-.
T Consensus 492 ~l~~v~~~l~~l~~~~~~~~~~~~v~~~~~~~lgry~~~~~~~~~~l~~vl~~ll~~l~~~~~~V~~~A~~al~~l~~ 569 (1049)
T 3m1i_C 492 FVVTVIKDLLDLTVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQ 569 (1049)
T ss_dssp HHHHHHHHHHHHTTSSCSHHHHHHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 45555555544321 23444443 333333334456788999999999888888888887777666655443
No 86
>3tt9_A Plakophilin-2; cell adhesion; 1.55A {Homo sapiens}
Probab=35.61 E-value=1.9e+02 Score=23.95 Aligned_cols=83 Identities=10% Similarity=0.066 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHhcCCCc---hH-HhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhh-----HHHHHHHHHHHhc
Q 026179 23 AVKLSSLKQVRGILSSADPS---LA-AELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEH-----SSILMPVLLAFLR 93 (242)
Q Consensus 23 ~~kl~~L~q~relll~~~p~---ll-~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~-----~~~~v~~L~~LL~ 93 (242)
..|......++.+..++++. +. ...+|.++++-.+++.++++..+.-|.-+....++. -.-.++.|..+|+
T Consensus 25 ~~q~~Aa~~l~~L~~~~~~~r~~I~~~G~Ip~LV~lL~s~~~~vq~~Aa~aL~nLa~~~~~nk~~I~~~GaI~~Lv~lL~ 104 (233)
T 3tt9_A 25 SRISAAATFIQHECFQKSEARKRVNQLRGILKLLQLLKVQNEDVQRAVCGALRNLVFEDNDNKLEVAELNGVPRLLQVLK 104 (233)
T ss_dssp HHHHHHHHHHHHHHHHCHHHHHHHHHTTHHHHHHHGGGCCCHHHHHHHHHHHHHHHTTCHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHHcCCHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHcCCHHHHHHHHc
Confidence 46777777777777655431 11 456788888866678899999999998876543321 2235777888887
Q ss_pred -CCChHHHHHHHH
Q 026179 94 -DGDSGVAGKSIV 105 (242)
Q Consensus 94 -d~~~~V~K~aI~ 105 (242)
..++.+.+.+..
T Consensus 105 ~~~~~~~~e~a~~ 117 (233)
T 3tt9_A 105 QTRDLETKKQITG 117 (233)
T ss_dssp HCCCHHHHHHHHH
T ss_pred cCCCHHHHHHHHH
Confidence 467888777653
No 87
>2h80_A STAR-related lipid transfer protein 13; helical bundle, lipid binding protein; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2jw2_A
Probab=33.28 E-value=16 Score=25.94 Aligned_cols=26 Identities=23% Similarity=0.356 Sum_probs=21.7
Q ss_pred cccccccCCCCCCCChhhHHHHHHHH
Q 026179 191 TFNISWLSGGHPFLDPVSLTSEANRM 216 (242)
Q Consensus 191 d~sl~~vP~~Hp~l~~~~Le~Ea~~l 216 (242)
.+.++.|..+|+||+...|++=..++
T Consensus 46 PIdi~~VkkDH~FLd~d~l~sL~RRl 71 (81)
T 2h80_A 46 PINIVAVKNDHDFLEKDLVEPLCRRL 71 (81)
T ss_dssp CSCHHHHHTSCCSSCSTTHHHHHHHH
T ss_pred cccHHHhccCCCccCHHHHHHHHHHH
Confidence 47778999999999999998866653
No 88
>3nmw_A APC variant protein; ARMADIILO repeats domain, cell adhesion-cell cycle complex; 1.60A {Homo sapiens} PDB: 3nmx_A 3t7u_A 3au3_A 3qhe_A
Probab=32.77 E-value=92 Score=27.43 Aligned_cols=52 Identities=12% Similarity=0.070 Sum_probs=39.7
Q ss_pred hhhHHHHHHHHHHHHhhchhh---hH---HHHHHHHHHHhcCCChHHHHHHHHhhhhh
Q 026179 59 ESLVRKSLIETIEDIGLKAME---HS---SILMPVLLAFLRDGDSGVAGKSIVCGTNF 110 (242)
Q Consensus 59 ~~~vrk~~~~fiee~~~~~~e---~~---~~~v~~L~~LL~d~~~~V~K~aI~~~~~l 110 (242)
+.++++..+..|..+|+.+.+ .+ ..+++.|..+|+.+++.|...++.+..++
T Consensus 97 ~~~~q~~Aa~aL~nLa~~~~~~k~~i~~~~GaIp~LV~LL~s~~~~v~~~A~~aL~nL 154 (354)
T 3nmw_A 97 SITLRRYAGMALTNLTFGDVANKATLCSMKGCMRALVAQLKSESEDLQQVIASVLRNL 154 (354)
T ss_dssp HHHHHHHHHHHHHHHTSSCHHHHHHHHHCHHHHHHHHHGGGCSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHcCCHHHHHHHHHcCCcHHHHHHHHCCCCHHHHHHHHHHHHHH
Confidence 568999999999998865432 22 34689999999999998888877766554
No 89
>3qml_C Protein SLS1, nucleotide exchange factor SIL1; armadillo like repeats, chaperone-protein transport complex; 2.31A {Saccharomyces cerevisiae}
Probab=32.50 E-value=61 Score=28.76 Aligned_cols=80 Identities=10% Similarity=0.170 Sum_probs=52.2
Q ss_pred HHHHhcCCCchHHhhhHHHHhhc---CCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHHHHhcCC--ChHHHHHHHHhh
Q 026179 33 RGILSSADPSLAAELFPYLVELQ---SSPESLVRKSLIETIEDIGLKAMEHSSILMPVLLAFLRDG--DSGVAGKSIVCG 107 (242)
Q Consensus 33 relll~~~p~ll~~~l~~vl~~~---~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~~LL~d~--~~~V~K~aI~~~ 107 (242)
-+.+.+.+|.|....++++-... .+.+..+.|-+.+.|.+..+...++...=+..|..++.-. ++.+..+|..-.
T Consensus 105 l~~V~~~~p~fv~~lf~~L~~~~~~~~~~~~~l~KR~LsII~~L~~~~~~F~~~~m~~L~~ly~~~~~d~~~k~Kvl~li 184 (315)
T 3qml_C 105 VEFINESFPNFKSKIMAALSNLNDSNHRSSNILIKRYLSILNELPVTSEDLPIYSTVVLQNVYERNNKDKQLQIKVLELI 184 (315)
T ss_dssp HHHHHHHCTTHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHHSCCCSTTC--CCHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHhChhHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHhcChHhhhhccHHHHHHHHccCCCCHHHHHHHHHHH
Confidence 34444568888888888765432 2234478888888887765443333333445566665544 899999999888
Q ss_pred hhhhH
Q 026179 108 TNFFC 112 (242)
Q Consensus 108 ~~lY~ 112 (242)
.-+|.
T Consensus 185 ~d~f~ 189 (315)
T 3qml_C 185 SKILK 189 (315)
T ss_dssp HHHHH
T ss_pred HHHcc
Confidence 88885
No 90
>4gmo_A Putative uncharacterized protein; ARM, heat, solenoid, nuclear transport, chaperone, RPL5, RPL KAP104, nucleus; 2.10A {Chaetomium thermophilum var} PDB: 4gmn_A
Probab=30.61 E-value=64 Score=31.00 Aligned_cols=63 Identities=16% Similarity=0.180 Sum_probs=42.8
Q ss_pred hhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhh-----hHHHHH-HHHHHHhcCCChHHHHHHHHhhhhh
Q 026179 46 ELFPYLVELQSSPESLVRKSLIETIEDIGLKAME-----HSSILM-PVLLAFLRDGDSGVAGKSIVCGTNF 110 (242)
Q Consensus 46 ~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e-----~~~~~v-~~L~~LL~d~~~~V~K~aI~~~~~l 110 (242)
.++| +++--.+++++.|.|.+.-|.+++.. ++ .-...+ ..+..+|.|.+..|...|..++.+|
T Consensus 35 ~i~P-ll~~L~S~~~~~r~~A~~al~~l~~~-~~~~~l~~~~~~v~~ll~~lL~D~~~~Vr~~A~gaLrnL 103 (684)
T 4gmo_A 35 KILP-VLKDLKSPDAKSRTTAAGAIANIVQD-AKCRKLLLREQVVHIVLTETLTDNNIDSRAAGWEILKVL 103 (684)
T ss_dssp TTHH-HHHHHSSSCCSHHHHHHHHHHHHTTS-HHHHHHHHHTTHHHHHHHTTTTCSCHHHHHHHHHHHHHH
T ss_pred hHHH-HHHHcCCCCHHHHHHHHHHHHHHHcC-cHHHHHHHHcCCHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 3455 44332367788999999999998852 21 122333 3456778999999998888887766
No 91
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=29.33 E-value=2.7e+02 Score=27.20 Aligned_cols=67 Identities=12% Similarity=0.111 Sum_probs=42.1
Q ss_pred chHHhhhHHHHhhcC-CchhhHHHHHHHHHHHHh---hchhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 42 SLAAELFPYLVELQS-SPESLVRKSLIETIEDIG---LKAMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 42 ~ll~~~l~~vl~~~~-d~~~~vrk~~~~fiee~~---~~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
..++.+++-+.++.. |.++.||.-....+...+ ..+++++..+++.|...| | +.|...|..++..+-
T Consensus 501 ~~l~~l~~~l~~l~~~d~~~~vr~~a~~~l~~~~~~l~~~~~~l~~vl~~l~~~l-~--~~v~~~A~~al~~l~ 571 (971)
T 2x1g_F 501 RQIPRLMRVLAEIPYEKLNVKLLGTALETMGSYCNWLMENPAYIPPAINLLVRGL-N--SSMSAQATLGLKELC 571 (971)
T ss_dssp CHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTHHHHC----CHHHHHHHHHHHH-H--SSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCccccCHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHh-C--hHHHHHHHHHHHHHH
Confidence 456777774445542 557788888877776643 356788999999888777 4 666666655555443
No 92
>1vh6_A Flagellar protein FLIS; structural genomics, unknown function; HET: MSE; 2.50A {Bacillus subtilis} SCOP: a.24.19.1
Probab=26.83 E-value=2.2e+02 Score=21.97 Aligned_cols=31 Identities=19% Similarity=0.347 Sum_probs=24.0
Q ss_pred HHHHHHHHHhhc---CCChHHHHHHHHHHHHHHh
Q 026179 7 DQALSLLAAANN---HGDLAVKLSSLKQVRGILS 37 (242)
Q Consensus 7 ~~v~~lln~A~~---~~d~~~kl~~L~q~relll 37 (242)
|.++.-|+.|.. .+|.++|-..+.++++++.
T Consensus 31 dgal~~l~~A~~aie~~d~~~k~~~i~KA~~Ii~ 64 (145)
T 1vh6_A 31 NGCLKFIRLAAQAIENDDMERKNENLIKAQNIIQ 64 (145)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 445666777774 3899999999999999884
No 93
>2dky_A RHO-GTPase-activating protein 7; cell-free protein synthesis, protein regulation, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.60.1.3 PDB: 2gyt_A 2kap_A
Probab=25.92 E-value=16 Score=26.41 Aligned_cols=25 Identities=28% Similarity=0.450 Sum_probs=20.9
Q ss_pred cccccccCCCCCCCChhhHHHHHHH
Q 026179 191 TFNISWLSGGHPFLDPVSLTSEANR 215 (242)
Q Consensus 191 d~sl~~vP~~Hp~l~~~~Le~Ea~~ 215 (242)
.+.++.|..+|+||+...|++=..+
T Consensus 48 PIdi~~VkkDH~FLd~d~l~sL~RR 72 (91)
T 2dky_A 48 PIDISLVKREHDFLDRDAIEALCRR 72 (91)
T ss_dssp SCCHHHHHHHTTTSCHHHHHHHHHH
T ss_pred cccHHHhccCCCccCHHHHHHHHHH
Confidence 4777899999999999999876655
No 94
>4ffb_C Protein STU2; tubulin fold, heat repeats, cytoskeleton, microtubule, tubul domain, hydrolase; HET: GTP; 2.88A {Saccharomyces cerevisiae}
Probab=25.88 E-value=2.7e+02 Score=22.73 Aligned_cols=152 Identities=10% Similarity=0.108 Sum_probs=88.6
Q ss_pred HhhcCCChHHHHHHHHHHHHHHhcCCCc--------hHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhc-------h--
Q 026179 15 AANNHGDLAVKLSSLKQVRGILSSADPS--------LAAELFPYLVELQSSPESLVRKSLIETIEDIGLK-------A-- 77 (242)
Q Consensus 15 ~A~~~~d~~~kl~~L~q~relll~~~p~--------ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~-------~-- 77 (242)
+=..+.+=.++.+.+.++++++-..... .+..+.+.+-..-.|.+..|..-..+++...+.. .
T Consensus 16 e~l~sk~WK~R~eale~l~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~l~DsN~~v~~~al~~l~~~~~~~~~~~~~~~~ 95 (278)
T 4ffb_C 16 ERLTYKLWKARLEAYKELNQLFRNSVGDISRDDNIQIYWRDPTLFAQYITDSNVVAQEQAIVALNSLIDAFASSSLKNAH 95 (278)
T ss_dssp HHTTCSSHHHHHHHHHHHHHHHHTC----------CCTTSCTHHHHHHTTCSSHHHHHHHHHHHHHHHTTCC---CCHHH
T ss_pred HhcccCcHHHHHHHHHHHHHHHhhCcccccchhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHhhhhhcccch
Confidence 3334566677888888888887532111 1222233232334588888888887877765431 1
Q ss_pred -hhhHHHHHHHHHH-HhcCCChHHHHHHHHhhhhhh------HHHHHHHhhhhhccCCccchHHHHHHHHHHHHHH----
Q 026179 78 -MEHSSILMPVLLA-FLRDGDSGVAGKSIVCGTNFF------CRVLEEITMQFRWHGKVERWLEELWTWMVRFKDA---- 145 (242)
Q Consensus 78 -~e~~~~~v~~L~~-LL~d~~~~V~K~aI~~~~~lY------~~~l~~~~~~~~~~~~~~~~~~~~W~~m~~~K~~---- 145 (242)
..++..+++.|.. .+.|..+.+...++.++..+. ..+++.+.. + ..++.+.-...+..++..+=..
T Consensus 96 ~~~~~~~~l~~lveK~l~~~k~~~~~~a~~~l~~~~~~~~~~~~~~e~l~~-~-l~~Knpkv~~~~l~~l~~~l~~fg~~ 173 (278)
T 4ffb_C 96 NITLISTWTPLLVEKGLTSSRATTKTQSMSCILSLCGLDTSITQSVELVIP-F-FEKKLPKLIAAAANCVYELMAAFGLT 173 (278)
T ss_dssp HHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHTSSSSHHHHHHHGG-G-GGCSCHHHHHHHHHHHHHHHHHHTTT
T ss_pred hHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHhcCcHHHHHHHHHH-H-HhccCHHHHHHHHHHHHHHHHHhCCC
Confidence 1245555665554 366778888777776664442 234444432 2 2344556667777777654211
Q ss_pred --------------HHHHhccCCCCchHHHHHHHHhHH
Q 026179 146 --------------VFAIALEPGLVGTKLLALKFLETH 169 (242)
Q Consensus 146 --------------Il~~~~d~~n~Gvr~~aiKF~e~v 169 (242)
+.. .+++.+.+||-+|++++-.+
T Consensus 174 ~~~~k~~l~~i~~~l~k-~l~d~~~~VR~aA~~l~~~l 210 (278)
T 4ffb_C 174 NVNVQTFLPELLKHVPQ-LAGHGDRNVRSQTMNLIVEI 210 (278)
T ss_dssp TCCHHHHHHHHGGGHHH-HHTCSSHHHHHHHHHHHHHH
T ss_pred cCCchhHHHHHHHHHHH-HHhCCcHHHHHHHHHHHHHH
Confidence 122 45788999999999988554
No 95
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster}
Probab=25.09 E-value=1.1e+02 Score=30.19 Aligned_cols=102 Identities=11% Similarity=0.036 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhch-----hh
Q 026179 5 SRDQALSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKA-----ME 79 (242)
Q Consensus 5 ~~~~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~-----~e 79 (242)
+-+++.+++..... +|...|-+.-..+++ +.++|+.. .++..++ +.+.+.++|-|.+..+....+++ ++
T Consensus 5 d~~~l~~~l~~~~~-~d~~~r~~A~~~L~~--~~~~p~~w-~~~~~lL--~~~~~~~vr~~aa~~L~~~i~~~w~~l~~~ 78 (971)
T 2x1g_F 5 DIARLEEAVVSFYR-SNSQNQAITHEWLTD--AEASPQAW-QFSWQLM--QLGKSQEVQFFGAITLHSKLMKHWHEVPPE 78 (971)
T ss_dssp ------CTHHHHHT-STTTC----CHHHHH--TTTSTHHH-HHHHHHT--CTTSCHHHHHHHHHHHHHHHHHCGGGCCGG
T ss_pred hHHHHHHHHHHHcC-CCHHHHHHHHHHHHH--HHcCHHHH-HHHHHHH--hcCCcHHHHHHHHHHHHHHHHccHhhCCHH
Confidence 34556666666443 443334333333333 13566433 2444454 34567899999999998765431 11
Q ss_pred ----hHHHHHHHHHHHhcCCChHHHHHHHHhhhhhhHH
Q 026179 80 ----HSSILMPVLLAFLRDGDSGVAGKSIVCGTNFFCR 113 (242)
Q Consensus 80 ----~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY~~ 113 (242)
+=..++..+...- ...+.|..+..++.+.+...
T Consensus 79 ~~~~ir~~ll~~l~~~~-~~~~~vr~kl~~~la~i~~~ 115 (971)
T 2x1g_F 79 NREELKQKILESIVRFA-GGPKIVLNRLCISLGAYIVH 115 (971)
T ss_dssp GHHHHHHHHHHHHHHHT-TSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHHHH
Confidence 2222332332221 22467777777777665443
No 96
>4hat_C Exportin-1; heat repeat, nuclear export, RAN-ranbp1, LMB, leptomycin B, protein transport-antibiotic complex; HET: GNP LMB; 1.78A {Saccharomyces cerevisiae} PDB: 4hau_C* 4hav_C* 4hb2_C* 4hax_C* 4haw_C* 4hay_C* 4hb3_C* 4haz_C* 4hb4_C* 3m1i_C* 4hb0_C* 4gmx_C* 4gpt_C* 3vyc_A 2l1l_B
Probab=25.05 E-value=78 Score=32.28 Aligned_cols=69 Identities=10% Similarity=0.138 Sum_probs=43.8
Q ss_pred hHHhhhHHHHhhcC-----CchhhHHH---HHHHHHHHHhhchhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhhhh
Q 026179 43 LAAELFPYLVELQS-----SPESLVRK---SLIETIEDIGLKAMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTNFF 111 (242)
Q Consensus 43 ll~~~l~~vl~~~~-----d~~~~vrk---~~~~fiee~~~~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~lY 111 (242)
++++++|.++.+-. |+...||. |+++=+.+-...+++++..++.-|...+.|+.|.|.-.|..|+.++-
T Consensus 492 ~l~~vi~~Ll~l~~~~~~~d~k~~v~~t~~~~lGry~~wl~~~~~~L~~vl~~L~~~l~~~~~~v~~~A~~al~~l~ 568 (1023)
T 4hat_C 492 FVVTVIKDLLDLCVKKRGKDNKAVVASDIMYVVGQYPRFLKAHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIV 568 (1023)
T ss_dssp HHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHTCHHHHHHCHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccccCcchHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHH
Confidence 55666666666532 24445664 33332333345688999999988888888888877766666554443
No 97
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=24.84 E-value=3.6e+02 Score=23.83 Aligned_cols=102 Identities=14% Similarity=0.133 Sum_probs=62.9
Q ss_pred CCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHHHHhcC-CChHHHHHHHHhhhhhhHHHHHHHhhhhhccCCccchHHH
Q 026179 56 SSPESLVRKSLIETIEDIGLKAMEHSSILMPVLLAFLRD-GDSGVAGKSIVCGTNFFCRVLEEITMQFRWHGKVERWLEE 134 (242)
Q Consensus 56 ~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~~LL~d-~~~~V~K~aI~~~~~lY~~~l~~~~~~~~~~~~~~~~~~~ 134 (242)
..++.++..-+.+++...|.-..|-+- +...+.| ..+.++-+.-.-.+..|..+.+.+. .. +....
T Consensus 194 ~~~~~Dls~~~l~~L~~l~LAQAQE~~-----~~Kai~~~~k~~liAkLa~~~~~~Y~~A~~~l~-----~~---~~~~~ 260 (380)
T 3c3r_A 194 REPTVDISPDTVGTLSLIMLAQAQEVF-----FLKATRDKMKDAIIAKLANQAADYFGDAFKQCQ-----YK---DTLPK 260 (380)
T ss_dssp SCCCTTTSHHHHHHHHHHHHHHHHHHH-----HHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHT-----TC---CCSCT
T ss_pred CCCCccCCHHHHHHHHHHHHHHHHHHH-----HHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHc-----cc---ccccH
Confidence 455666777777777777654433211 1112223 3445544444455889999995553 11 23446
Q ss_pred HHHHHHHHHHHHHHH---------hccCCCCchHHHHHHHHhHHh
Q 026179 135 LWTWMVRFKDAVFAI---------ALEPGLVGTKLLALKFLETHV 170 (242)
Q Consensus 135 ~W~~m~~~K~~Il~~---------~~d~~n~Gvr~~aiKF~e~vI 170 (242)
.|..+..+|.....- ..+.+..|..++..+..+..+
T Consensus 261 ~w~~~v~~K~~~~~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l 305 (380)
T 3c3r_A 261 EVFPVLAAKHCIMQANAEYHQSILAKQQKKFGEEIARLQHAAELI 305 (380)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHH
Confidence 899999999876532 225788999999888777653
No 98
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B
Probab=24.67 E-value=4.6e+02 Score=25.39 Aligned_cols=65 Identities=11% Similarity=0.158 Sum_probs=43.1
Q ss_pred chHHhhhHHHHhhcCCchhhHHHHHHHHHHHHh---hchhhhHHHHHHHHHHHhcCCChHHHHHHHHhhhh
Q 026179 42 SLAAELFPYLVELQSSPESLVRKSLIETIEDIG---LKAMEHSSILMPVLLAFLRDGDSGVAGKSIVCGTN 109 (242)
Q Consensus 42 ~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~---~~~~e~~~~~v~~L~~LL~d~~~~V~K~aI~~~~~ 109 (242)
.+++.+++.+..+.. .++.||.-...++...+ ..+++++..+++.|...|.+ +.|...|..++..
T Consensus 486 ~~l~~l~~~l~~l~~-~~~~vr~~~~~~l~~~~~~l~~~~~~l~~vl~~l~~~l~~--~~V~~~A~~al~~ 553 (963)
T 2x19_B 486 DVVPGLIGLIPRISI-SNVQLADTVMFTIGALSEWLADHPVMINSVLPLVLHALGN--PELSVSSVSTLKK 553 (963)
T ss_dssp SHHHHHHHHGGGSCC-CSHHHHHHHHHHHHHTHHHHHHCHHHHTTTHHHHHHHTTC--GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCC-CcHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhCC--chHHHHHHHHHHH
Confidence 466777775555543 45668888877776543 34568888888888877765 6666555554443
No 99
>2rg8_A Programmed cell death protein 4; MA3 domain, heat repeats, anti-oncogene, apoptosis, cell cycle, cytoplasm, nucleus, phosphorylation, polymorphism; 1.80A {Homo sapiens} PDB: 2kzt_A
Probab=23.81 E-value=2.6e+02 Score=21.82 Aligned_cols=64 Identities=13% Similarity=0.099 Sum_probs=46.9
Q ss_pred HHHHHHHHHHhhcCCChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhh
Q 026179 6 RDQALSLLAAANNHGDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGL 75 (242)
Q Consensus 6 ~~~v~~lln~A~~~~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~ 75 (242)
..++.+++++=-.+.|..|=+..++ |+ +.|.+.+.|+-.+++.+.|+...-|..++.++...+.
T Consensus 10 ~kk~~~ii~EYf~~~D~~Ea~~~l~---eL---~~p~~~~~~V~~~I~~aldrk~~ere~~s~LL~~L~~ 73 (165)
T 2rg8_A 10 EKTLTPIIQEYFEHGDTNEVAEMLR---DL---NLGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCG 73 (165)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHH---HH---TCSGGGGHHHHHHHHHHHTSCHHHHHHHHHHHHHHBT
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHH---Hh---CCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 3456777777777788655555554 42 3677888999988888888888888888888887653
No 100
>1ho8_A Vacuolar ATP synthase subunit H; heat repeat, hydrolase; 2.95A {Saccharomyces cerevisiae} SCOP: a.118.1.9
Probab=23.54 E-value=2.3e+02 Score=26.50 Aligned_cols=39 Identities=15% Similarity=-0.039 Sum_probs=31.4
Q ss_pred chHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHhHHh
Q 026179 130 RWLEELWTWMVRFKDAVFAIALEPGLVGTKLLALKFLETHV 170 (242)
Q Consensus 130 ~~~~~~W~~m~~~K~~Il~~~~d~~n~Gvr~~aiKF~e~vI 170 (242)
|.-....+.+. .|.+|.. +..++|.-||=.|++-+|+++
T Consensus 437 P~gr~i~~~lg-~K~~VM~-Lm~h~d~~Vr~~AL~avQklm 475 (480)
T 1ho8_A 437 PESIDVLDKTG-GKADIME-LLNHSDSRVKYEALKATQAII 475 (480)
T ss_dssp TTHHHHHHHHS-HHHHHHH-HTSCSSHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHcC-cHHHHHH-HhcCCCHHHHHHHHHHHHHHH
Confidence 33455666664 5999999 669999999999999999975
No 101
>2f4m_B UV excision repair protein RAD23 homolog B; glycoproteins, ubiquitin-dependent protein degradation, NUCL excision repair, peptide:N-glycanase; 1.85A {Mus musculus} SCOP: a.189.1.1 PDB: 2f4o_B*
Probab=22.78 E-value=56 Score=21.84 Aligned_cols=23 Identities=30% Similarity=0.587 Sum_probs=17.5
Q ss_pred HHHHHHHHHhcCCCchHHhhhHHH
Q 026179 28 SLKQVRGILSSADPSLAAELFPYL 51 (242)
Q Consensus 28 ~L~q~relll~~~p~ll~~~l~~v 51 (242)
++.+.|+++ ..+|++++.++..+
T Consensus 12 qf~~lR~~v-q~NP~~L~~lLqql 34 (61)
T 2f4m_B 12 QFQQMRQII-QQNPSLLPALLQQI 34 (61)
T ss_dssp HHHHHHHHH-HHCGGGHHHHHHHH
T ss_pred HHHHHHHHH-HHCHHHHHHHHHHH
Confidence 567788888 48998777777755
No 102
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B
Probab=21.58 E-value=1.6e+02 Score=29.44 Aligned_cols=58 Identities=14% Similarity=0.036 Sum_probs=40.1
Q ss_pred CCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchh------------hhHHHHHHHHHHHhcCCC
Q 026179 39 ADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAM------------EHSSILMPVLLAFLRDGD 96 (242)
Q Consensus 39 ~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~------------e~~~~~v~~L~~LL~d~~ 96 (242)
.+|.+++..++.+++.-.+++..||...+.-+..+|.... .++..++..+..++.+-+
T Consensus 533 ~~~~~l~~vl~~ll~~l~~~~~~V~~~A~~al~~l~~~~~~~l~~~~~~~~~p~~~~il~~l~~~~~~~~ 602 (1049)
T 3m1i_C 533 AHWNFLRTVILKLFEFMHETHEGVQDMACDTFIKIVQKCKYHFVIQQPRESEPFIQTIIRDIQKTTADLQ 602 (1049)
T ss_dssp HCHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHTHHHHSCCTTCSSCHHHHHHHTHHHHHTTSC
T ss_pred hHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCcHHHHHHHHHHHHHHhCC
Confidence 4677778888888776567778888888877666654321 456777777777776543
No 103
>2b6c_A Hypothetical protein EF3068; structural genomis, DNA repair enzyme, structural genomics, protein structure initiative; HET: SO4; 2.10A {Enterococcus faecalis} SCOP: a.118.1.17
Probab=21.08 E-value=1.9e+02 Score=23.47 Aligned_cols=80 Identities=8% Similarity=0.015 Sum_probs=39.9
Q ss_pred HHHHHH-HHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhchhhhHHHHHHHHHHHhcCCChHHHHHHH
Q 026179 26 LSSLKQ-VRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKAMEHSSILMPVLLAFLRDGDSGVAGKSI 104 (242)
Q Consensus 26 l~~L~q-~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~~e~~~~~v~~L~~LL~d~~~~V~K~aI 104 (242)
++.+.. +..++. ++| ..+.+.+.+...+.+.=+||+++... ...++......+.+.+..++.|+.--|-|-+-
T Consensus 107 ~D~~a~~~~~~~~-~~~---~~~~~~i~~W~~s~~~w~rR~ai~~~--l~~~~~~~~~~~~~i~~~~~~d~~~yV~kavg 180 (220)
T 2b6c_A 107 VDAWRKFFGSWVA-LHL---TELPTIFALFYGAENFWNRRVALNLQ--LMLKEKTNQDLLKKAIIYDRTTEEFFIQKAIG 180 (220)
T ss_dssp HHHHHHHHHHHHH-HSG---GGHHHHHHHHTTCSSHHHHHHHHHTT--TTCGGGCCHHHHHHHHHHTTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHH-HCh---HHHHHHHHHHHcCCCHHHHHHHHHHH--HHHHHCCCHHHHHHHHHHhCCChHHHHHHHHH
Confidence 344543 555553 566 33444455666677777888876633 11122233333344444455555554444433
Q ss_pred Hhhhhhh
Q 026179 105 VCGTNFF 111 (242)
Q Consensus 105 ~~~~~lY 111 (242)
=+...++
T Consensus 181 W~Lr~~~ 187 (220)
T 2b6c_A 181 WSLRQYS 187 (220)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 3334333
No 104
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens}
Probab=20.22 E-value=6.3e+02 Score=25.85 Aligned_cols=104 Identities=9% Similarity=0.066 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhhcC-CChHHHHHHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHHHHHHHHHHHHhhch-----hh
Q 026179 6 RDQALSLLAAANNH-GDLAVKLSSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVRKSLIETIEDIGLKA-----ME 79 (242)
Q Consensus 6 ~~~v~~lln~A~~~-~d~~~kl~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vrk~~~~fiee~~~~~-----~e 79 (242)
-+++.++|..+..+ +|...|-+.-.+++++ .++|.......- +|. ..+.+..+|-|.+..++...+++ .+
T Consensus 10 ~~~l~~~l~~~~~p~~~~~~r~~Ae~~L~~~--~~~p~~~~~~~~-~L~-~~s~~~~vR~~A~~~Lk~~I~~~W~~l~~e 85 (1204)
T 3a6p_A 10 CEQLVKAVTVMMDPNSTQRYRLEALKFCEEF--KEKCPICVPCGL-RLA-EKTQVAIVRHFGLQILEHVVKFRWNGMSRL 85 (1204)
T ss_dssp HHHHHHHHHHHHCTTCCHHHHHHHHHHHHHH--HHHCTTHHHHHH-HHT-STTSCHHHHHHHHHHHHHHHHHSGGGSCHH
T ss_pred HHHHHHHHHHHhCCCCChHHHHHHHHHHHHH--HhCchHHHHHHH-HHH-ccCCCHHHHHHHHHHHHHHHHHhcccCCHH
Confidence 35577888887776 5654454444444443 234522212222 222 24557889999998888765431 22
Q ss_pred hHHHHHHHHHHHh-cC------CChHHHHHHHHhhhhhhHH
Q 026179 80 HSSILMPVLLAFL-RD------GDSGVAGKSIVCGTNFFCR 113 (242)
Q Consensus 80 ~~~~~v~~L~~LL-~d------~~~~V~K~aI~~~~~lY~~ 113 (242)
--..+-..+..++ +. +++.|..+..++.+.|.+.
T Consensus 86 ~k~~Ir~~ll~~l~~~~~~~~~~~~~vr~kla~~la~Ia~~ 126 (1204)
T 3a6p_A 86 EKVYLKNSVMELIANGTLNILEEENHIKDALSRIVVEMIKR 126 (1204)
T ss_dssp HHHHHHHHHHHHHHHSSCCTTSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhccccccccHHHHHHHHHHHHHHHHH
Confidence 2222222222332 22 3466666666666665544
No 105
>2jak_A Serine/threonine-protein phosphatase 2A 56 kDa RE subunit gamma isoform; B56G, PP2A, PPP2R5C, phosphorylation; 2.60A {Homo sapiens} SCOP: a.118.1.20
Probab=20.12 E-value=4.8e+02 Score=23.61 Aligned_cols=81 Identities=16% Similarity=0.120 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhcCCCchHHhhhHHHHhhcCCchhhHH--HHHHHHHHHHhhc-hh-hhH---HHHHHHHHHHhcCCChHH
Q 026179 27 SSLKQVRGILSSADPSLAAELFPYLVELQSSPESLVR--KSLIETIEDIGLK-AM-EHS---SILMPVLLAFLRDGDSGV 99 (242)
Q Consensus 27 ~~L~q~relll~~~p~ll~~~l~~vl~~~~d~~~~vr--k~~~~fiee~~~~-~~-e~~---~~~v~~L~~LL~d~~~~V 99 (242)
.+|...-...++|||++...++.+++-+ .|-+.-. -...+.|+++... .+ ++. ..+...+..-+..+.-.|
T Consensus 277 ~qL~ycv~qf~eKDp~L~~~vi~~LLk~--WP~tns~KevlFL~eleeiLe~~~~~~f~~i~~~lF~~la~ci~S~hfqV 354 (392)
T 2jak_A 277 PQLAYCVVQFLEKDSTLTEPVVMALLKY--WPKTHSPKEVMFLNELEEILDVIEPSEFVKIMEPLFRQLAKCVSSPHFQV 354 (392)
T ss_dssp HHHHHHHHHHHHHCGGGHHHHHHHHHHS--SCSSCCTTHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSSHHH
T ss_pred HHHHHHHHHHHhcCchhHHHHHHHHHHh--CCCCCchHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHcCCcHHH
Confidence 4566666666789999999999998764 3322222 2344556666532 22 222 222222333345566677
Q ss_pred HHHHHHhhhh
Q 026179 100 AGKSIVCGTN 109 (242)
Q Consensus 100 ~K~aI~~~~~ 109 (242)
+.||+....+
T Consensus 355 AErAL~~wnN 364 (392)
T 2jak_A 355 AERALYYWNN 364 (392)
T ss_dssp HHHHHGGGGC
T ss_pred HHHHHHHhCc
Confidence 7776554443
No 106
>1pve_A HHR23B, UV excision repair protein RAD23 homolog B; XPC binding domain, solution structure, nucleotide excision repair, chaps, DNA binding protein; NMR {Homo sapiens} SCOP: a.189.1.1
Probab=20.06 E-value=42 Score=23.29 Aligned_cols=23 Identities=30% Similarity=0.587 Sum_probs=16.9
Q ss_pred HHHHHHHHHhcCCCchHHhhhHHH
Q 026179 28 SLKQVRGILSSADPSLAAELFPYL 51 (242)
Q Consensus 28 ~L~q~relll~~~p~ll~~~l~~v 51 (242)
++.+.|+++ ..+|++++.++..+
T Consensus 14 qf~qlR~~v-qqNP~lL~~lLqqL 36 (72)
T 1pve_A 14 QFQQMRQII-QQNPSLLPALLQQI 36 (72)
T ss_dssp TTTTHHHHH-TTCGGGHHHHHHHH
T ss_pred HHHHHHHHH-HHCHHHHHHHHHHH
Confidence 355788888 58998777777754
Done!