Query 026186
Match_columns 242
No_of_seqs 131 out of 591
Neff 4.2
Searched_HMMs 13730
Date Mon Mar 25 07:36:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026186.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026186hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rh5b_ f.23.28.1 (B:) Preprot 10.9 1.5E+02 0.011 19.1 4.0 26 99-124 17-42 (56)
2 d3b45a1 f.51.1.1 (A:91-270) Gl 8.6 1.6E+02 0.012 21.2 3.9 17 160-176 161-177 (180)
3 d1n2fa_ d.227.1.1 (A:) Organic 6.5 3.6E+02 0.026 18.3 5.0 26 99-124 46-71 (142)
4 d1ml8a_ d.227.1.2 (A:) Hypothe 5.8 2.8E+02 0.021 18.7 4.0 26 99-124 33-58 (134)
5 d1xaka_ b.1.24.1 (A:) Accessor 5.5 68 0.0049 21.1 0.2 25 31-56 27-51 (68)
6 d1vlaa_ d.227.1.2 (A:) Hypothe 5.4 3.1E+02 0.022 18.7 4.0 26 99-124 41-66 (144)
7 d2onfa1 d.227.1.1 (A:1-139) Hy 4.9 3.7E+02 0.027 18.1 4.2 26 99-124 39-64 (139)
8 d1uspa_ d.227.1.1 (A:) Organic 4.9 3.2E+02 0.023 18.4 3.7 26 99-124 41-66 (137)
9 d1ukka_ d.227.1.1 (A:) Hypothe 4.9 3.1E+02 0.023 18.7 3.7 25 100-124 43-67 (141)
10 d1tbua1 d.38.1.3 (A:13-116) Pe 4.8 96 0.007 21.7 0.7 19 149-168 19-37 (104)
No 1
>d1rh5b_ f.23.28.1 (B:) Preprotein translocase SecE subunit {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=10.91 E-value=1.5e+02 Score=19.06 Aligned_cols=26 Identities=15% Similarity=0.254 Sum_probs=20.3
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHh
Q 026186 99 NPSLSDILWPSAGAFAAMAILGKMDQ 124 (242)
Q Consensus 99 ~~~l~d~l~a~lGaflgI~ll~~l~~ 124 (242)
+|+..|......-+.+|+++++.+..
T Consensus 17 KP~~~Ef~~ia~v~~iG~~i~G~IGf 42 (56)
T d1rh5b_ 17 KPTKDEYLAVAKVTALGISLLGIIGY 42 (56)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45568888888888888888887764
No 2
>d3b45a1 f.51.1.1 (A:91-270) GlpG {Escherichia coli [TaxId: 562]}
Probab=8.55 E-value=1.6e+02 Score=21.19 Aligned_cols=17 Identities=18% Similarity=0.139 Sum_probs=9.3
Q ss_pred hhhhHHHHHHHHHHHHh
Q 026186 160 FMSQIGCAAIGVLAFSI 176 (242)
Q Consensus 160 IgGHliSAlIGv~~~~l 176 (242)
..||+.+.++|++...+
T Consensus 161 ~~aHlgG~l~G~~~~~~ 177 (180)
T d3b45a1 161 NGAHIAGLAVGLAMAFV 177 (180)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34566666666555443
No 3
>d1n2fa_ d.227.1.1 (A:) Organic hydroperoxide resistance protein Ohr {Pseudomonas aeruginosa, pa01 [TaxId: 287]}
Probab=6.49 E-value=3.6e+02 Score=18.29 Aligned_cols=26 Identities=12% Similarity=-0.092 Sum_probs=20.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHh
Q 026186 99 NPSLSDILWPSAGAFAAMAILGKMDQ 124 (242)
Q Consensus 99 ~~~l~d~l~a~lGaflgI~ll~~l~~ 124 (242)
.+++.|.+.+.+|++..+.+......
T Consensus 46 g~~P~elllaalasC~~~t~~~~a~~ 71 (142)
T d1n2fa_ 46 ATNPEQLFAAGYSACFIGAMKFVAGQ 71 (142)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34569999999999998887766654
No 4
>d1ml8a_ d.227.1.2 (A:) Hypothetical protein in CRP region {Escherichia coli [TaxId: 562]}
Probab=5.78 E-value=2.8e+02 Score=18.74 Aligned_cols=26 Identities=19% Similarity=0.432 Sum_probs=21.6
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHh
Q 026186 99 NPSLSDILWPSAGAFAAMAILGKMDQ 124 (242)
Q Consensus 99 ~~~l~d~l~a~lGaflgI~ll~~l~~ 124 (242)
.+++.|.|.+.+|++.++.+...+..
T Consensus 33 gp~P~elllaal~~C~~~~~~~~a~~ 58 (134)
T d1ml8a_ 33 APSPMEMVLMAAGGCSAIDVVSILQK 58 (134)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 34569999999999999998877664
No 5
>d1xaka_ b.1.24.1 (A:) Accessory protein X4 (ORF8, ORF7a) {SARS coronavirus [TaxId: 227859]}
Probab=5.48 E-value=68 Score=21.10 Aligned_cols=25 Identities=40% Similarity=0.414 Sum_probs=15.7
Q ss_pred hccCCCCCCCCCccceeecccccccc
Q 026186 31 ISKLPDHPLSGNKRSLLLGTSLSFNS 56 (242)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 56 (242)
-..-|-|||+.||-.+ --+|+-+.+
T Consensus 27 egnspfhpladnkfal-tctsthfaf 51 (68)
T d1xaka_ 27 EGNSPFHPLADNKFAL-TCTSTHFAF 51 (68)
T ss_dssp EESSCCCEETTTEEEE-ECCSEEEEE
T ss_pred cCCCCCccccCCcEEE-EEecceEEE
Confidence 3456899999998543 234444443
No 6
>d1vlaa_ d.227.1.2 (A:) Hypothetical protein TM0919 {Thermotoga maritima [TaxId: 2336]}
Probab=5.35 E-value=3.1e+02 Score=18.67 Aligned_cols=26 Identities=8% Similarity=0.221 Sum_probs=21.0
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHh
Q 026186 99 NPSLSDILWPSAGAFAAMAILGKMDQ 124 (242)
Q Consensus 99 ~~~l~d~l~a~lGaflgI~ll~~l~~ 124 (242)
.+++.|.|.+.+|++.++.+...+..
T Consensus 41 g~~P~elllaala~C~~~~~~~~a~~ 66 (144)
T d1vlaa_ 41 APRPLELVLTGLMGCTGMDVVSILRK 66 (144)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 35569999999999999888777653
No 7
>d2onfa1 d.227.1.1 (A:1-139) Hypothetical protein Ta0195 {Thermoplasma acidophilum [TaxId: 2303]}
Probab=4.91 E-value=3.7e+02 Score=18.11 Aligned_cols=26 Identities=8% Similarity=-0.042 Sum_probs=21.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHh
Q 026186 99 NPSLSDILWPSAGAFAAMAILGKMDQ 124 (242)
Q Consensus 99 ~~~l~d~l~a~lGaflgI~ll~~l~~ 124 (242)
.+++.|.+.+.+|++.++.+......
T Consensus 39 g~~P~elllaala~C~~~~~~~~a~~ 64 (139)
T d2onfa1 39 QLYPETLFPSVLASCLLTTFLEFKDR 64 (139)
T ss_dssp SBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44569999999999999998877765
No 8
>d1uspa_ d.227.1.1 (A:) Organic hydroperoxide resistance protein Ohr {Deinococcus radiodurans [TaxId: 1299]}
Probab=4.89 E-value=3.2e+02 Score=18.38 Aligned_cols=26 Identities=8% Similarity=-0.105 Sum_probs=21.4
Q ss_pred CCchhHHHHHHHHHHHHHHHHHHHHh
Q 026186 99 NPSLSDILWPSAGAFAAMAILGKMDQ 124 (242)
Q Consensus 99 ~~~l~d~l~a~lGaflgI~ll~~l~~ 124 (242)
.+++.|++.+.++++.++.+......
T Consensus 41 g~~P~elllaAlasC~~~t~~~~a~~ 66 (137)
T d1uspa_ 41 GTNPEQLFAAGYAACFQGALGVVSRR 66 (137)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35569999999999999888777665
No 9
>d1ukka_ d.227.1.1 (A:) Hypothetical protein MPN625 {Thermus thermophilus [TaxId: 274]}
Probab=4.89 E-value=3.1e+02 Score=18.74 Aligned_cols=25 Identities=8% Similarity=0.256 Sum_probs=20.9
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHh
Q 026186 100 PSLSDILWPSAGAFAAMAILGKMDQ 124 (242)
Q Consensus 100 ~~l~d~l~a~lGaflgI~ll~~l~~ 124 (242)
++..|.|.+.+|++.++.+......
T Consensus 43 p~P~elllaala~C~~~~~~~~a~~ 67 (141)
T d1ukka_ 43 TNPEELIAAAHAGCFSMALAASLER 67 (141)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4559999999999999988777665
No 10
>d1tbua1 d.38.1.3 (A:13-116) Peroxisomal long-chain acyl-CoA thioesterase 1, TES1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=4.81 E-value=96 Score=21.68 Aligned_cols=19 Identities=16% Similarity=0.331 Sum_probs=8.4
Q ss_pred CCCCCccchhhhhhhHHHHH
Q 026186 149 PSTPAARKYNVFMSQIGCAA 168 (242)
Q Consensus 149 P~SPlAQPrnVIgGHliSAl 168 (242)
|..| .|-|.++|||+++-.
T Consensus 19 ~~~p-~~~r~~fGG~~~Aqa 37 (104)
T d1tbua1 19 PAAP-VGSKGTFGGTLVSQS 37 (104)
T ss_dssp C---------CCHHHHHHHH
T ss_pred CCCC-CCCCceEHHHHHHHH
Confidence 4555 667889999988743
Done!