Query 026187
Match_columns 242
No_of_seqs 128 out of 1186
Neff 9.6
Searched_HMMs 29240
Date Mon Mar 25 07:37:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026187.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026187hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2lck_A Mitochondrial uncouplin 100.0 1.5E-41 5.1E-46 282.5 14.9 210 4-239 81-291 (303)
2 1okc_A ADP, ATP carrier protei 100.0 7.3E-40 2.5E-44 271.7 19.0 211 3-234 83-297 (297)
3 1okc_A ADP, ATP carrier protei 100.0 4.7E-39 1.6E-43 266.8 19.6 197 27-237 4-204 (297)
4 2lck_A Mitochondrial uncouplin 100.0 2.7E-38 9.3E-43 262.9 16.7 186 33-238 4-196 (303)
5 2bnk_A Early protein GP16.7; D 31.8 36 0.0012 19.9 2.4 47 45-92 19-65 (67)
6 2acm_A Mucin-1; auto-catalytic 31.8 11 0.00038 22.2 0.2 20 70-89 40-59 (66)
7 3f2e_A SIRV coat protein; four 24.1 31 0.0011 21.5 1.3 33 185-217 7-43 (100)
8 3tgu_G UQCRQ, mitochondrial ub 20.9 65 0.0022 20.3 2.3 37 199-235 31-67 (81)
9 3fbl_A Putative uncharacterize 19.6 37 0.0013 20.1 0.9 28 189-216 4-35 (82)
10 1pp9_G Ubiquinol-cytochrome C 16.4 1.2E+02 0.0041 19.0 2.9 36 200-235 32-67 (81)
No 1
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=1.5e-41 Score=282.55 Aligned_cols=210 Identities=25% Similarity=0.367 Sum_probs=181.4
Q ss_pred HHHHHhhhhhhhhHHHhhcccccCcchHHHHHHHHHHHHHHHHhhchHHHHHHHHhccccC-CCCCcCcHHHHHHHHHHh
Q 026187 4 IALALSQTQQSSSLVMRKHLKEAELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEK-SPRQYRGIFHALTTVLRE 82 (242)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lag~~a~~~~~~i~~Pld~ik~~~q~~~~~-~~~~~~~~~~~~~~i~~~ 82 (242)
.++.|..++..++.+.... ...+....+++|++||+++.++++|+|+||+|+|++... ...+|++.++++++|+++
T Consensus 81 ~~i~f~~ye~~k~~~~~~~---~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~i~~~ 157 (303)
T 2lck_A 81 ASVRIGLYDSVKQFYTKGS---EHAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAGGGRRYQSTVEAYKTIARE 157 (303)
T ss_dssp HHHTTTHHHHHHHHHSCCC---SSCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCCCSSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCC---cCCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccCCCCCCCCHHHHHHHHHHh
Confidence 4566777777777653321 146678899999999999999999999999999998643 345789999999999999
Q ss_pred cCccccccchhhhhhhhchhhhhHHHHHHHHHHHHHhhhccCCCCCCCchhHHHHHHHHhHHHHHHHhhcccHHHHHHHh
Q 026187 83 EGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRM 162 (242)
Q Consensus 83 ~G~~gly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~iktr~ 162 (242)
||++|||||+.+++++.++..+++|.+||.+|+.+.+.. ....+....+++|++||++++++++|+|+||+|+
T Consensus 158 eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~-------~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrl 230 (303)
T 2lck_A 158 EGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAN-------LMTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRY 230 (303)
T ss_dssp HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTT-------SCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc-------CCCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 999999999999999999999999999999999876431 1133466789999999999999999999999999
Q ss_pred hhcCcccccccccCCCCcccccccCcHHHHHHHHHHhhhhhhhccChhhhhhhhhhhhhhHHHHHHHHHHHhccccc
Q 026187 163 QMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEMR 239 (242)
Q Consensus 163 q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~gly~G~~~~~~~~~~~~~i~~~~y~~l~~~~~~~~~ 239 (242)
|++.. ..|.++++|+++|+++||++|||||+.|+++|.+|..+++|.+||.+|+++.+..+
T Consensus 231 q~~~~----------------~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~~~~ 291 (303)
T 2lck_A 231 MNSAL----------------GQYHSAGHCALTMLRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMAAYQ 291 (303)
T ss_dssp TTCCS----------------SSCCSHHHHHHHHHHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred Hhccc----------------cccCCHHHHHHHHHHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhcc
Confidence 99752 25899999999999999999999999999999999999999999999998866543
No 2
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=7.3e-40 Score=271.67 Aligned_cols=211 Identities=27% Similarity=0.480 Sum_probs=173.0
Q ss_pred HHHHHHhhhhhhhhHHHhhcccccC--cchHHHHHHHHHHHHHHHHhhchHHHHHHHHhccccC--CCCCcCcHHHHHHH
Q 026187 3 LIALALSQTQQSSSLVMRKHLKEAE--LTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEK--SPRQYRGIFHALTT 78 (242)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~lag~~a~~~~~~i~~Pld~ik~~~q~~~~~--~~~~~~~~~~~~~~ 78 (242)
..++.|..++..++........... .+....+++|++||+++.++++|+|+||+|+|++... ...+|+++++++++
T Consensus 83 ~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~~~~~~~~~~~~~~~~ 162 (297)
T 1okc_A 83 TQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKGAAQREFTGLGNCITK 162 (297)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSSTTTCSCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCCCcCcCCCCHHHHHHH
Confidence 3567788888877754443322222 2356789999999999999999999999999998542 23568999999999
Q ss_pred HHHhcCccccccchhhhhhhhchhhhhHHHHHHHHHHHHHhhhccCCCCCCCchhHHHHHHHHhHHHHHHHhhcccHHHH
Q 026187 79 VLREEGPRSLYKGWLPSVIGVIPYVGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVI 158 (242)
Q Consensus 79 i~~~~G~~gly~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~i 158 (242)
|+++||++|||||+.+++++.++.++++|.+||.+|+.+.+. ...+....+++|++||+++.++++|+|+|
T Consensus 163 i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~---------~~~~~~~~~~~g~~ag~~a~~~t~P~dvv 233 (297)
T 1okc_A 163 IFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP---------KNVHIIVSWMIAQTVTAVAGLVSYPFDTV 233 (297)
T ss_dssp HHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG---------GCSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC---------CCccHHHHHHHHHHHHHHHHHhcChHHHH
Confidence 999999999999999999999999999999999999866432 12346678889999999999999999999
Q ss_pred HHHhhhcCcccccccccCCCCcccccccCcHHHHHHHHHHhhhhhhhccChhhhhhhhhhhhhhHHHHHHHHHHHh
Q 026187 159 RRRMQMAGWKDAASVVTGDGKTKATLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDIL 234 (242)
Q Consensus 159 ktr~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~gly~G~~~~~~~~~~~~~i~~~~y~~l~~~~ 234 (242)
|+|+|++.... .....|.++++|+++|+++||++|||||+.|+++|. +.+++.|.+||.+|+++
T Consensus 234 ktr~q~~~~~~-----------~~~~~y~~~~~~~~~i~~~eG~~glyrG~~~~~~r~-~~~~~~f~~ye~~k~~l 297 (297)
T 1okc_A 234 RRRMMMQSGRK-----------GADIMYTGTVDCWRKIAKDEGPKAFFKGAWSNVLRG-MGGAFVLVLYDEIKKFV 297 (297)
T ss_dssp HHHHHTTTTCC-----------GGGCSCSSHHHHHHHHHHHHCGGGGGTTHHHHHHHH-HHHHHHHHHHHTC----
T ss_pred HHHHhhcCCCC-----------CCCCCCCCHHHHHHHHHHHcCcCeEecchHHHHHhh-ccceeeehHHHHHHhhC
Confidence 99999875321 112468999999999999999999999999999996 57799999999998753
No 3
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=4.7e-39 Score=266.78 Aligned_cols=197 Identities=28% Similarity=0.404 Sum_probs=168.4
Q ss_pred CcchHHHHHHHHHHHHHHHHhhchHHHHHHHHhccccC----CCCCcCcHHHHHHHHHHhcCccccccchhhhhhhhchh
Q 026187 27 ELTPVLRLGAGACAGIIAMSATYPMDMVRGRLTVQTEK----SPRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPY 102 (242)
Q Consensus 27 ~~~~~~~~lag~~a~~~~~~i~~Pld~ik~~~q~~~~~----~~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~ 102 (242)
.++++.++++|++||+++.+++||+|+||+|+|++... ...+|++.++++++++++||++|||||+.+++++.++.
T Consensus 4 ~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~ 83 (297)
T 1okc_A 4 ALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRYFPT 83 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSSCCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccccccccccccHHHHHHHHHhccchhheecccHHHHHHHHHH
Confidence 34677899999999999999999999999999998642 23468999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhhhccCCCCCCCchhHHHHHHHHhHHHHHHHhhcccHHHHHHHhhhcCcccccccccCCCCccc
Q 026187 103 VGLNFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKA 182 (242)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~ 182 (242)
++++|.+||.+|+.+..... ............+++|++||+++.++++|+|+||+|+|++.... ..
T Consensus 84 ~~~~f~~ye~~k~~~~~~~~---~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~-----------~~ 149 (297)
T 1okc_A 84 QALNFAFKDKYKQIFLGGVD---RHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG-----------AA 149 (297)
T ss_dssp HHHHHHHHHHHHHHHHTTCC---TTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS-----------TT
T ss_pred HHHHHHHHHHHHHHhccccC---cccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCC-----------Cc
Confidence 99999999999996543210 01111134567889999999999999999999999999975321 11
Q ss_pred ccccCcHHHHHHHHHHhhhhhhhccChhhhhhhhhhhhhhHHHHHHHHHHHhccc
Q 026187 183 TLEYNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVE 237 (242)
Q Consensus 183 ~~~~~~~~~~~~~i~~~~Gi~gly~G~~~~~~~~~~~~~i~~~~y~~l~~~~~~~ 237 (242)
...|.++++++++|+++||++|||+|+.|++++.+|+++++|.+||.+|+.+.+.
T Consensus 150 ~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~ 204 (297)
T 1okc_A 150 QREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDP 204 (297)
T ss_dssp TCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGG
T ss_pred CcCCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 2468999999999999999999999999999999999999999999999988653
No 4
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=2.7e-38 Score=262.92 Aligned_cols=186 Identities=31% Similarity=0.563 Sum_probs=166.2
Q ss_pred HHHHHHHHHHHHHHhhchHHHHHHHHhccccCC-------CCCcCcHHHHHHHHHHhcCccccccchhhhhhhhchhhhh
Q 026187 33 RLGAGACAGIIAMSATYPMDMVRGRLTVQTEKS-------PRQYRGIFHALTTVLREEGPRSLYKGWLPSVIGVIPYVGL 105 (242)
Q Consensus 33 ~~lag~~a~~~~~~i~~Pld~ik~~~q~~~~~~-------~~~~~~~~~~~~~i~~~~G~~gly~G~~~~~~~~~~~~~~ 105 (242)
++++|++||+++.+++||+|+||+|+|++.... ..+|++.++++++++++||++|||||+.+++++.++..++
T Consensus 4 ~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i 83 (303)
T 2lck_A 4 KFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFASV 83 (303)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHHH
T ss_pred hHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHHH
Confidence 689999999999999999999999999986532 3468999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCchhHHHHHHHHhHHHHHHHhhcccHHHHHHHhhhcCcccccccccCCCCcccccc
Q 026187 106 NFAVYESLKDWLIKSKALGLVDDNNELGVATRLACGAAAGTVGQTVAYPLDVIRRRMQMAGWKDAASVVTGDGKTKATLE 185 (242)
Q Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~iktr~q~~~~~~~~~~~~~~~~~~~~~~ 185 (242)
+|.+||.+|+.+.+.. + ..+....+++|++||+++.++++|+|+||+|+|++.... ....
T Consensus 84 ~f~~ye~~k~~~~~~~-------~-~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~------------~~~~ 143 (303)
T 2lck_A 84 RIGLYDSVKQFYTKGS-------E-HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAG------------GGRR 143 (303)
T ss_dssp TTTHHHHHHHHHSCCC-------S-SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCC------------CSSS
T ss_pred HHHHHHHHHHHHhcCC-------c-CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccC------------CCCC
Confidence 9999999999876421 1 245778899999999999999999999999999975321 1236
Q ss_pred cCcHHHHHHHHHHhhhhhhhccChhhhhhhhhhhhhhHHHHHHHHHHHhcccc
Q 026187 186 YNGMVDAFRKTVRHEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILGVEM 238 (242)
Q Consensus 186 ~~~~~~~~~~i~~~~Gi~gly~G~~~~~~~~~~~~~i~~~~y~~l~~~~~~~~ 238 (242)
|.+.++++++|+++||++|||+|+.|++++.+|.++++|.+||.+|+.+.+..
T Consensus 144 ~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~ 196 (303)
T 2lck_A 144 YQSTVEAYKTIAREEGIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKAN 196 (303)
T ss_dssp CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTT
T ss_pred CCCHHHHHHHHHHhcChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 89999999999999999999999999999999999999999999999986543
No 5
>2bnk_A Early protein GP16.7; DNA-binding protein; 2.9A {Bacillus phage PHI29} SCOP: a.251.1.1 PDB: 2c5r_A 1zae_A
Probab=31.80 E-value=36 Score=19.90 Aligned_cols=47 Identities=19% Similarity=0.285 Sum_probs=30.5
Q ss_pred HHhhchHHHHHHHHhccccCCCCCcCcHHHHHHHHHHhcCccccccch
Q 026187 45 MSATYPMDMVRGRLTVQTEKSPRQYRGIFHALTTVLREEGPRSLYKGW 92 (242)
Q Consensus 45 ~~i~~Pld~ik~~~q~~~~~~~~~~~~~~~~~~~i~~~~G~~gly~G~ 92 (242)
+-+--|+|.|--.. .+...+...-.+..+.-+.-|+-+.-+-+|||.
T Consensus 19 SnIrIP~DIIEdl~-~~~L~te~EVmnYiEnqR~~WKLEN~KKly~g~ 65 (67)
T 2bnk_A 19 SNIRIPSDIIEDLV-NQRLQSEQEVLNYIETQRTYWKLENQKKLYRGS 65 (67)
T ss_dssp TTCCCCHHHHHHHH-TTCCCCSHHHHHHHHHHHHHHHHHTTSCCCCSC
T ss_pred cCCcCcHHHHHHHH-HHhhhhHHHHHHHHHhhHhHHhhhhhHHHHhcc
Confidence 34566888886554 222222222345666778888999999999995
No 6
>2acm_A Mucin-1; auto-catalytic proteolysis, structural protein; NMR {Homo sapiens}
Probab=31.77 E-value=11 Score=22.19 Aligned_cols=20 Identities=20% Similarity=0.272 Sum_probs=17.0
Q ss_pred CcHHHHHHHHHHhcCccccc
Q 026187 70 RGIFHALTTVLREEGPRSLY 89 (242)
Q Consensus 70 ~~~~~~~~~i~~~~G~~gly 89 (242)
+++.+.+.+||+++++.||+
T Consensus 40 r~is~L~lqIykq~~FLgl~ 59 (66)
T 2acm_A 40 RDISEMFLQIYKQGGFLGLS 59 (66)
T ss_dssp HHHHHHHHHHCTTTTEEEEE
T ss_pred HHHHHHHHHHHccCCeeeee
Confidence 46778889999999999886
No 7
>3f2e_A SIRV coat protein; four helix bundle, virus coat protein, viral protein; HET: CIT; 1.67A {Sulfolobus islandicus rudivirus 1 variorganism_taxid}
Probab=24.13 E-value=31 Score=21.48 Aligned_cols=33 Identities=12% Similarity=0.402 Sum_probs=23.2
Q ss_pred ccCcHHHHHHHHHHhhhh----hhhccChhhhhhhhh
Q 026187 185 EYNGMVDAFRKTVRHEGF----GALYKGLVPNSVKVV 217 (242)
Q Consensus 185 ~~~~~~~~~~~i~~~~Gi----~gly~G~~~~~~~~~ 217 (242)
++.+.-+-+..++.+.|+ +..|+|++....|.+
T Consensus 7 kftsvne~vsavltqygvtgpnraiyqgfglkvaral 43 (100)
T 3f2e_A 7 KFTAVAEQVSAVLSQYGITGPNRAIYQGFGLKVARAL 43 (100)
T ss_dssp -CHHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHhcCCCccHHHHhhhhHHHHHHH
Confidence 555666667777788886 568999988776654
No 8
>3tgu_G UQCRQ, mitochondrial ubiquinol-cytochrome C reductase UB binding protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein; HET: HEM WF3 UQ CDL PEE HEC BOG; 2.70A {Gallus gallus} PDB: 3cwb_G* 3h1i_G* 3h1h_G* 3h1k_G* 3h1l_G* 3h1j_G* 3l71_G* 3l72_G* 3l73_G* 3l74_G* 3l75_G* 3l70_G*
Probab=20.91 E-value=65 Score=20.32 Aligned_cols=37 Identities=14% Similarity=0.300 Sum_probs=29.0
Q ss_pred hhhhhhhccChhhhhhhhhhhhhhHHHHHHHHHHHhc
Q 026187 199 HEGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILG 235 (242)
Q Consensus 199 ~~Gi~gly~G~~~~~~~~~~~~~i~~~~y~~l~~~~~ 235 (242)
..|+...+|-+..+++..+|..++.+.+|+..++..+
T Consensus 31 ~~~i~N~~RR~~~q~l~v~pPfi~~Y~i~~Wa~~~ne 67 (81)
T 3tgu_G 31 SDALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFE 67 (81)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHH
Confidence 3456666666777788899999999999999887764
No 9
>3fbl_A Putative uncharacterized protein; AFV1, archaeal virus, extremophiles, lipothrixviridae, structural protein, DNA-binding protein; 1.95A {Acidianus filamentous virus 1}
Probab=19.56 E-value=37 Score=20.11 Aligned_cols=28 Identities=14% Similarity=0.271 Sum_probs=18.9
Q ss_pred HHHHHHHHHHhhhh----hhhccChhhhhhhh
Q 026187 189 MVDAFRKTVRHEGF----GALYKGLVPNSVKV 216 (242)
Q Consensus 189 ~~~~~~~i~~~~Gi----~gly~G~~~~~~~~ 216 (242)
+.-.+++|++.+|+ +|.|-.++-.+++.
T Consensus 4 lrlaikeicktdgipnikwgmyiafgekllks 35 (82)
T 3fbl_A 4 LRLAIKEICKTDGIPNIKWGMYIAFGEKLLKS 35 (82)
T ss_dssp HHHHHHHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCCCCcchhHHHHHHHHHHHHH
Confidence 44568899999987 45666666555543
No 10
>1pp9_G Ubiquinol-cytochrome C reductase complex ubiquino protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein, cytochrome B, complex III; HET: BHG HEM HEC SMA UQ CDL PEE; 2.10A {Bos taurus} SCOP: f.23.13.1 PDB: 1bgy_G* 1be3_G* 1l0n_G* 1ntk_G* 1ntm_G* 1ntz_G* 1nu1_G* 1l0l_G* 1ppj_G* 1sqb_G* 1sqp_G* 1sqq_G* 1sqv_G* 1sqx_G* 2a06_G* 2fyu_G* 2ybb_G* 1bcc_G* 2bcc_G* 3bcc_G* ...
Probab=16.44 E-value=1.2e+02 Score=19.04 Aligned_cols=36 Identities=11% Similarity=0.257 Sum_probs=29.2
Q ss_pred hhhhhhccChhhhhhhhhhhhhhHHHHHHHHHHHhc
Q 026187 200 EGFGALYKGLVPNSVKVVPSIAIAFVTYEMVKDILG 235 (242)
Q Consensus 200 ~Gi~gly~G~~~~~~~~~~~~~i~~~~y~~l~~~~~ 235 (242)
.|+...+|-+...++..+|...+.+.+|+..++..+
T Consensus 32 ~~i~n~~RR~~~~~l~v~pPfv~~Y~i~~Wa~~~~e 67 (81)
T 1pp9_G 32 KGIPNVLRRTRACILRVAPPFVAFYLVYTWGTQEFE 67 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHhcceeeehhHHHHHHHHHHHHHHHH
Confidence 566667777777888889999999999999888764
Done!