Query 026197
Match_columns 242
No_of_seqs 120 out of 1267
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 07:52:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026197.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026197hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1okc_A ADP, ATP carrier protei 100.0 2.8E-45 9.4E-50 300.2 19.8 229 9-242 3-234 (297)
2 2lck_A Mitochondrial uncouplin 100.0 3.2E-45 1.1E-49 300.5 18.2 224 15-242 3-227 (303)
3 2lck_A Mitochondrial uncouplin 100.0 2.9E-38 9.8E-43 259.2 16.0 188 10-209 101-288 (303)
4 1okc_A ADP, ATP carrier protei 100.0 1.1E-37 3.6E-42 255.2 16.3 186 12-206 111-296 (297)
5 3f2e_A SIRV coat protein; four 41.1 34 0.0012 20.9 3.5 69 158-227 7-82 (100)
6 3fbl_A Putative uncharacterize 36.0 30 0.001 20.2 2.5 28 161-188 3-34 (82)
7 2acm_A Mucin-1; auto-catalytic 25.8 15 0.00052 21.3 0.1 20 59-78 40-59 (66)
8 3tgu_G UQCRQ, mitochondrial ub 23.6 1E+02 0.0035 19.1 3.6 39 173-211 32-70 (81)
9 2a3d_A Protein (de novo three- 21.3 1.2E+02 0.0042 17.1 3.3 15 33-47 10-24 (73)
10 1y9i_A Low temperature require 16.9 48 0.0017 24.0 1.2 43 192-234 112-159 (178)
No 1
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=2.8e-45 Score=300.17 Aligned_cols=229 Identities=23% Similarity=0.369 Sum_probs=195.3
Q ss_pred CccchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhccccccCCCccCCCCCcHHHHHHHHHHhhCccccccChhHHHHHH
Q 026197 9 SDISLAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQ 88 (242)
Q Consensus 9 ~~~~~~~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~ 88 (242)
++.++..++++|+++|+++.++++|+|++|+|+|++..... ......|+++++++++++++||+++||||+.+++++.
T Consensus 3 ~~~~~~~~~~aG~~ag~~~~~~~~Pld~vKtrlQ~~~~~~~--~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~ 80 (297)
T 1okc_A 3 QALSFLKDFLAGGVAAAISKTAVAPIERVKLLLQVQHASKQ--ISAEKQYKGIIDCVVRIPKEQGFLSFWRGNLANVIRY 80 (297)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHGGGCSS--CCGGGSCCSHHHHHHHHHHHHCGGGGGTTTHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHhcccccc--cccccccccHHHHHHHHHhccchhheecccHHHHHHH
Confidence 34667889999999999999999999999999999864311 0123468999999999999999999999999999999
Q ss_pred hhhchhheeecHHHHhhh-ccCCCCCC--CchHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCCCCCCCCCCchHHH
Q 026197 89 CLFGGLRIGLYEPVKTLY-VGKDFVGD--VPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNA 165 (242)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~g~~a~~~~~~i~~P~d~ik~r~q~~~~~~~~~~~~y~~~~~~ 165 (242)
++..+++|.+||.+++.+ ...+.... .+....+++|++||++++++++|+|+||+|+|.+... .+....|++.+++
T Consensus 81 ~~~~~~~f~~ye~~k~~~~~~~~~~~~~~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~-~~~~~~~~~~~~~ 159 (297)
T 1okc_A 81 FPTQALNFAFKDKYKQIFLGGVDRHKQFWRYFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGK-GAAQREFTGLGNC 159 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCS-STTTCSCSSHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccC-CCcCcCCCCHHHH
Confidence 999999999999999954 32221112 2346788999999999999999999999999998542 1223579999999
Q ss_pred HHHHHHhhChhhhcccchhhHHHHHHHhhhHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhhcCcccccC
Q 026197 166 YSTIVKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVC 242 (242)
Q Consensus 166 ~~~i~~~~Gi~gly~G~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pldvir 242 (242)
+++++++||++|||||+.+++++.+|+.+++|.+||.+++.+.+.. +.+....+++|.+||++++++++|+|||+
T Consensus 160 ~~~i~~~eG~~glyrG~~~~l~~~~~~~~~~f~~ye~~k~~~~~~~--~~~~~~~~~~g~~ag~~a~~~t~P~dvvk 234 (297)
T 1okc_A 160 ITKIFKSDGLRGLYQGFNVSVQGIIIYRAAYFGVYDTAKGMLPDPK--NVHIIVSWMIAQTVTAVAGLVSYPFDTVR 234 (297)
T ss_dssp HHHHHHHHCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHSSCGGG--CSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHhccCC--CccHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence 9999999999999999999999999999999999999999765432 34677789999999999999999999985
No 2
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=3.2e-45 Score=300.52 Aligned_cols=224 Identities=48% Similarity=0.780 Sum_probs=196.4
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHhccccccCC-CccCCCCCcHHHHHHHHHHhhCccccccChhHHHHHHhhhch
Q 026197 15 GTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGD-GVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLFGG 93 (242)
Q Consensus 15 ~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~~~~-~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~~~ 93 (242)
.++++|++|++++.++++|+|++|+|+|++....... ......|++.++.+++++++||+++||||+.+++++.++..+
T Consensus 3 ~~~~aG~~ag~~~~~~~~Pld~iKtrlQ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~~~ 82 (303)
T 2lck_A 3 VKFLGAGTAACIADLITFPLDTAKVRLQIQGESQGLVRTAASAQYRGVLGTILTMVRTEGPRSLYNGLVAGLQRQMSFAS 82 (303)
T ss_dssp CHHHHHHHHHHHHHHTTHHHHHHHHHSSCCTTCCSHHHHCSCSSCSCHHHHHHHHHHHHCHHHHHSSHHHHHHHHHHHHH
T ss_pred hhHHhHHHHHHHHHHHcCcHHHHHHHHHhhhccccccccccCCCCCCHHHHHHHHHHhhCHHHHHcCCHHHHHHHHHHHH
Confidence 4689999999999999999999999999986431000 001346899999999999999999999999999999999999
Q ss_pred hheeecHHHHhhhccCCCCCCCchHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHHHhh
Q 026197 94 LRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVKQE 173 (242)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~ik~r~q~~~~~~~~~~~~y~~~~~~~~~i~~~~ 173 (242)
++|.+||.+++.+.+..+ ..+....+++|++||++++++++|+|+||+|+|.+... +....|++.++++++++++|
T Consensus 83 i~f~~ye~~k~~~~~~~~--~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~--~~~~~~~~~~~~~~~i~~~e 158 (303)
T 2lck_A 83 VRIGLYDSVKQFYTKGSE--HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARA--GGGRRYQSTVEAYKTIAREE 158 (303)
T ss_dssp HTTTHHHHHHHHHSCCCS--SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSC--CCSSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCc--CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhccccc--CCCCCCCCHHHHHHHHHHhc
Confidence 999999999998864422 35678899999999999999999999999999998642 23457999999999999999
Q ss_pred ChhhhcccchhhHHHHHHHhhhHHHHHHHHHHHHhcCCCCCchhHHHHHHHHHHHHHHHhhcCcccccC
Q 026197 174 GFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIPGFTDNVVTHLLSGLGAGFVAVCIGSPVDVVC 242 (242)
Q Consensus 174 Gi~gly~G~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~Pldvir 242 (242)
|++|||||+.+++++.+|+.+++|.+||.+++.+.+..+...+....+++|++||++++++++|+||||
T Consensus 159 G~~glyrG~~~~l~~~~~~~~i~f~~ye~~k~~l~~~~~~~~~~~~~~~~g~~ag~~~~~~~~P~dvvk 227 (303)
T 2lck_A 159 GIRGLWKGTSPNVARNAIVNCAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTTVIASPVDVVK 227 (303)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTTSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChhhhhCCccHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 999999999999999999999999999999999887554456778889999999999999999999985
No 3
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=100.00 E-value=2.9e-38 Score=259.16 Aligned_cols=188 Identities=25% Similarity=0.409 Sum_probs=168.8
Q ss_pred ccchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhccccccCCCccCCCCCcHHHHHHHHHHhhCccccccChhHHHHHHh
Q 026197 10 DISLAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQC 89 (242)
Q Consensus 10 ~~~~~~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~ 89 (242)
..+....+++|+++|+++.++++|+|++|+|+|++.... ....|++.++++++++++||+++||||+.+++++.+
T Consensus 101 ~~~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~-----~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~ 175 (303)
T 2lck_A 101 HAGIGSRLLAGSTTGALAVAVAQPTDVVKVRFQAQARAG-----GGRRYQSTVEAYKTIAREEGIRGLWKGTSPNVARNA 175 (303)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHSCSCC-----CSSSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHHcCcHHHHHHHHhcccccC-----CCCCCCCHHHHHHHHHHhcChhhhhCCccHHHHHHH
Confidence 367788999999999999999999999999999985421 234789999999999999999999999999999999
Q ss_pred hhchhheeecHHHHhhhccCCCCCCCchHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCCCCCCCCCCchHHHHHHH
Q 026197 90 LFGGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTI 169 (242)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~ik~r~q~~~~~~~~~~~~y~~~~~~~~~i 169 (242)
+..+++|.+||.+++.+.+... ...+....+++|++||++++++++|+|+||+|+|.+.. ..|+++++|++++
T Consensus 176 ~~~~i~f~~ye~~k~~l~~~~~-~~~~~~~~~~~g~~ag~~~~~~~~P~dvvktrlq~~~~------~~y~~~~~~~~~i 248 (303)
T 2lck_A 176 IVNCAELVTYDLIKDTLLKANL-MTDDLPCHFTSAFGAGFCTTVIASPVDVVKTRYMNSAL------GQYHSAGHCALTM 248 (303)
T ss_dssp HHHHHHHHHHHHHHHTTTTTTS-CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCS------SSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhccC-CCCchHHHHHHHHHHHHHHHHHcCHHHHHHHHHHhccc------cccCCHHHHHHHH
Confidence 9999999999999998854332 23456778999999999999999999999999998753 3699999999999
Q ss_pred HHhhChhhhcccchhhHHHHHHHhhhHHHHHHHHHHHHhc
Q 026197 170 VKQEGFAALWTGVGPNVARNAIINAAELASYDQVKQTILK 209 (242)
Q Consensus 170 ~~~~Gi~gly~G~~~~~~~~~~~~~~~~~~y~~l~~~~~~ 209 (242)
+++||++|||||+.++++|.+|..+++|.+||.+++.+.+
T Consensus 249 ~~~eG~~glyrG~~~~~~r~~p~~~i~f~~ye~~k~~l~~ 288 (303)
T 2lck_A 249 LRKEGPRAFYKGFMPSFLRLGSWNVVMFVTYEQLKRALMA 288 (303)
T ss_dssp HHSSCTHHHHSCCHHHHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHcChHHhhccHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999986653
No 4
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=100.00 E-value=1.1e-37 Score=255.16 Aligned_cols=186 Identities=24% Similarity=0.381 Sum_probs=160.3
Q ss_pred chHHHHHHHHHHHHHHHhhcchhHHHHHHHHhccccccCCCccCCCCCcHHHHHHHHHHhhCccccccChhHHHHHHhhh
Q 026197 12 SLAGTFASSAFAACFAEICTIPLDTAKVRLQLQKKAVAGDGVALPKYKGMLGTVATIAREEGMVSLWKGIVPGLHRQCLF 91 (242)
Q Consensus 12 ~~~~~~~~g~~a~~~~~~i~~Pld~vk~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~G~~~ly~G~~~~~~~~~~~ 91 (242)
++...+++|+++++++.++++|+|++|+|+|++.... .....|++.++++++++++||+++||||+.+++++.++.
T Consensus 111 ~~~~~~~ag~~ag~~~~~~~~Pld~vktrlq~~~~~~----~~~~~~~~~~~~~~~i~~~eG~~glyrG~~~~l~~~~~~ 186 (297)
T 1okc_A 111 YFAGNLASGGAAGATSLCFVYPLDFARTRLAADVGKG----AAQREFTGLGNCITKIFKSDGLRGLYQGFNVSVQGIIIY 186 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSS----TTTCSCSSHHHHHHHHHHHHCHHHHTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHhccccCC----CcCcCCCCHHHHHHHHHHhccHHHhcCCchHHHHHHHHH
Confidence 4567899999999999999999999999999985321 123468999999999999999999999999999999999
Q ss_pred chhheeecHHHHhhhccCCCCCCCchHHHHHHHHHHHHHHHHhhccHHHHHHHHHhcCCCCCCCCCCCCchHHHHHHHHH
Q 026197 92 GGLRIGLYEPVKTLYVGKDFVGDVPLSKKILAGLTTGALGIMIANPTDLVKVRLQAEGKLPPGVPRRYSGALNAYSTIVK 171 (242)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~i~~P~d~ik~r~q~~~~~~~~~~~~y~~~~~~~~~i~~ 171 (242)
.+++|.+||.+++.+.+.. ..+....+++|++||++++++++|+|+||+|+|.+... .+....|++.++|++++++
T Consensus 187 ~~~~f~~ye~~k~~~~~~~---~~~~~~~~~~g~~ag~~a~~~t~P~dvvktr~q~~~~~-~~~~~~y~~~~~~~~~i~~ 262 (297)
T 1okc_A 187 RAAYFGVYDTAKGMLPDPK---NVHIIVSWMIAQTVTAVAGLVSYPFDTVRRRMMMQSGR-KGADIMYTGTVDCWRKIAK 262 (297)
T ss_dssp HHHHHHHHHHHHHSSCGGG---CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTC-CGGGCSCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCC---CccHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhcCCC-CCCCCCCCCHHHHHHHHHH
Confidence 9999999999999774322 34567788999999999999999999999999987542 1223479999999999999
Q ss_pred hhChhhhcccchhhHHHHHHHhhhHHHHHHHHHHH
Q 026197 172 QEGFAALWTGVGPNVARNAIINAAELASYDQVKQT 206 (242)
Q Consensus 172 ~~Gi~gly~G~~~~~~~~~~~~~~~~~~y~~l~~~ 206 (242)
+||++|||||+.++++|. +..+++|.+||.+++.
T Consensus 263 ~eG~~glyrG~~~~~~r~-~~~~~~f~~ye~~k~~ 296 (297)
T 1okc_A 263 DEGPKAFFKGAWSNVLRG-MGGAFVLVLYDEIKKF 296 (297)
T ss_dssp HHCGGGGGTTHHHHHHHH-HHHHHHHHHHHTC---
T ss_pred HcCcCeEecchHHHHHhh-ccceeeehHHHHHHhh
Confidence 999999999999999995 5789999999998875
No 5
>3f2e_A SIRV coat protein; four helix bundle, virus coat protein, viral protein; HET: CIT; 1.67A {Sulfolobus islandicus rudivirus 1 variorganism_taxid}
Probab=41.09 E-value=34 Score=20.94 Aligned_cols=69 Identities=17% Similarity=0.244 Sum_probs=39.0
Q ss_pred CCCchHHHHHHHHHhhCh----hhhcccchhhHHHHHHHhhhHHHH---HHHHHHHHhcCCCCCchhHHHHHHHHHH
Q 026197 158 RYSGALNAYSTIVKQEGF----AALWTGVGPNVARNAIINAAELAS---YDQVKQTILKIPGFTDNVVTHLLSGLGA 227 (242)
Q Consensus 158 ~y~~~~~~~~~i~~~~Gi----~gly~G~~~~~~~~~~~~~~~~~~---y~~l~~~~~~~~~~~~~~~~~~~~g~~a 227 (242)
++.+..+-...+..+-|+ +.+|.||+..+.|..---+.--.+ .+-+|..+...-+ .++.+.+.+...+.
T Consensus 7 kftsvne~vsavltqygvtgpnraiyqgfglkvaralnr~g~gpalvnminglkayyisafn-anp~vldavtniit 82 (100)
T 3f2e_A 7 KFTAVAEQVSAVLSQYGITGPNRAIYQGFGLKVARALNRLGGGPALVNMINGLKAYYISAFN-ANPTVLDAVTDIIT 82 (100)
T ss_dssp -CHHHHHHHHHHHHHHTCCGGGHHHHHHHHHHHHHHHHHHCSSHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHhcCCCccHHHHhhhhHHHHHHHHhcCCchHHHHHHhhhhHhhhHhhc-CCcHHHHHHHHhhc
Confidence 677777777778888886 668999998887755333322222 2444554444322 22344444444443
No 6
>3fbl_A Putative uncharacterized protein; AFV1, archaeal virus, extremophiles, lipothrixviridae, structural protein, DNA-binding protein; 1.95A {Acidianus filamentous virus 1}
Probab=35.95 E-value=30 Score=20.16 Aligned_cols=28 Identities=18% Similarity=0.307 Sum_probs=18.6
Q ss_pred chHHHHHHHHHhhCh----hhhcccchhhHHH
Q 026197 161 GALNAYSTIVKQEGF----AALWTGVGPNVAR 188 (242)
Q Consensus 161 ~~~~~~~~i~~~~Gi----~gly~G~~~~~~~ 188 (242)
...-.++++++.+|+ .|+|-.|+-.+++
T Consensus 3 klrlaikeicktdgipnikwgmyiafgekllk 34 (82)
T 3fbl_A 3 KLRLAIKEICKTDGIPNIKWGMYIAFGEKLLK 34 (82)
T ss_dssp HHHHHHHHHHHHTTCCGGGHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHccCCCCcchhHHHHHHHHHHHH
Confidence 345678899999996 3455555555554
No 7
>2acm_A Mucin-1; auto-catalytic proteolysis, structural protein; NMR {Homo sapiens}
Probab=25.81 E-value=15 Score=21.26 Aligned_cols=20 Identities=15% Similarity=0.288 Sum_probs=17.0
Q ss_pred CcHHHHHHHHHHhhCccccc
Q 026197 59 KGMLGTVATIAREEGMVSLW 78 (242)
Q Consensus 59 ~~~~~~~~~i~~~~G~~~ly 78 (242)
+++.+.+..||+++++.|++
T Consensus 40 r~is~L~lqIykq~~FLgl~ 59 (66)
T 2acm_A 40 RDISEMFLQIYKQGGFLGLS 59 (66)
T ss_dssp HHHHHHHHHHCTTTTEEEEE
T ss_pred HHHHHHHHHHHccCCeeeee
Confidence 46788889999999998886
No 8
>3tgu_G UQCRQ, mitochondrial ubiquinol-cytochrome C reductase UB binding protein QP-C; cytochrome BC1, membrane protein, heme protein, rieske iron protein; HET: HEM WF3 UQ CDL PEE HEC BOG; 2.70A {Gallus gallus} PDB: 3cwb_G* 3h1i_G* 3h1h_G* 3h1k_G* 3h1l_G* 3h1j_G* 3l71_G* 3l72_G* 3l73_G* 3l74_G* 3l75_G* 3l70_G*
Probab=23.60 E-value=1e+02 Score=19.13 Aligned_cols=39 Identities=13% Similarity=0.185 Sum_probs=30.5
Q ss_pred hChhhhcccchhhHHHHHHHhhhHHHHHHHHHHHHhcCC
Q 026197 173 EGFAALWTGVGPNVARNAIINAAELASYDQVKQTILKIP 211 (242)
Q Consensus 173 ~Gi~gly~G~~~~~~~~~~~~~~~~~~y~~l~~~~~~~~ 211 (242)
+|+...+|-+..+++..+|...+...+|+..++.-+...
T Consensus 32 ~~i~N~~RR~~~q~l~v~pPfi~~Y~i~~Wa~~~ne~l~ 70 (81)
T 3tgu_G 32 DALPNVWRRFSSQVFKVAPPFLGAYLLYSWGTQEFERLK 70 (81)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hhhhHHHHHHHHhhhHhhHHHHHHHHHHHHHHHHHHHHh
Confidence 455556666778888899999999999999888776543
No 9
>2a3d_A Protein (de novo three-helix bundle); NMR {Synthetic construct} SCOP: k.9.1.1
Probab=21.27 E-value=1.2e+02 Score=17.14 Aligned_cols=15 Identities=33% Similarity=0.297 Sum_probs=11.0
Q ss_pred hhHHHHHHHHhcccc
Q 026197 33 PLDTAKVRLQLQKKA 47 (242)
Q Consensus 33 Pld~vk~~~q~~~~~ 47 (242)
-+..+|+|+|.-+..
T Consensus 10 rlaaiktrlqalggs 24 (73)
T 2a3d_A 10 RLAAIKTRLQALGGS 24 (73)
T ss_dssp HHHHHHHHHHHCSSG
T ss_pred HHHHHHHHHHHhcCc
Confidence 456789999986543
No 10
>1y9i_A Low temperature requirement C protein; structural genomics, protein structure initiative, PSI; 1.80A {Listeria monocytogenes} SCOP: a.195.1.1
Probab=16.93 E-value=48 Score=24.02 Aligned_cols=43 Identities=16% Similarity=0.197 Sum_probs=28.3
Q ss_pred HhhhHHHHHHHHHHHHhc-CC----CCCchhHHHHHHHHHHHHHHHhh
Q 026197 192 INAAELASYDQVKQTILK-IP----GFTDNVVTHLLSGLGAGFVAVCI 234 (242)
Q Consensus 192 ~~~~~~~~y~~l~~~~~~-~~----~~~~~~~~~~~~g~~a~~~~~~~ 234 (242)
-..+.|..||..|-...+ .+ +.-...+.++++|..|++++.++
T Consensus 112 ~gf~~Fr~fDi~KPgpI~~ld~~~~gg~gimlDDivAgi~A~~~~~l~ 159 (178)
T 1y9i_A 112 IGFTNYGYIDKVKPGILAKLNEHDGIAVHTFLDDIVGAIAAAAASRLA 159 (178)
T ss_dssp GGHHHHHHHHHHCCTHHHHTTCCCSSCCCTTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccchhHHhhhcccCCCCcchHHHHHHHHHHHHHHHHH
Confidence 455677788888865443 11 22234777899999998877543
Done!