Query 026201
Match_columns 241
No_of_seqs 162 out of 1382
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 07:57:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026201.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026201hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ojc_A Putative aspartate/glut 100.0 1E-36 3.5E-41 266.9 14.6 139 80-241 2-145 (231)
2 3s81_A Putative aspartate race 100.0 1.4E-34 4.9E-39 259.1 12.7 135 80-241 26-166 (268)
3 1jfl_A Aspartate racemase; alp 100.0 7E-34 2.4E-38 246.4 13.1 139 80-241 1-142 (228)
4 2zsk_A PH1733, 226AA long hypo 100.0 1.2E-33 4.2E-38 244.8 13.8 138 80-241 1-141 (226)
5 2oho_A Glutamate racemase; iso 99.9 7.1E-23 2.4E-27 182.7 15.3 135 74-239 6-142 (273)
6 2vvt_A Glutamate racemase; iso 99.9 8E-23 2.7E-27 184.2 15.5 137 73-240 17-155 (290)
7 3uhf_A Glutamate racemase; str 99.9 3.2E-22 1.1E-26 179.9 14.8 139 73-240 16-157 (274)
8 2jfq_A Glutamate racemase; cel 99.9 1.2E-21 4.1E-26 176.2 13.9 133 74-239 18-152 (286)
9 3out_A Glutamate racemase; str 99.9 1.5E-21 5.1E-26 174.7 13.3 130 77-240 4-136 (268)
10 3ist_A Glutamate racemase; str 99.9 7.5E-21 2.6E-25 170.3 16.3 130 80-240 5-136 (269)
11 2gzm_A Glutamate racemase; enz 99.8 5.2E-20 1.8E-24 163.7 15.5 128 81-239 4-133 (267)
12 1zuw_A Glutamate racemase 1; ( 99.8 6.1E-20 2.1E-24 163.9 15.7 128 81-239 4-134 (272)
13 1b73_A Glutamate racemase; iso 99.8 9.9E-20 3.4E-24 160.5 14.2 129 82-241 2-132 (254)
14 2dwu_A Glutamate racemase; iso 99.8 1.6E-19 5.5E-24 161.3 14.4 129 81-240 8-138 (276)
15 2jfz_A Glutamate racemase; cel 99.8 4.2E-19 1.4E-23 156.7 13.9 130 82-240 2-133 (255)
16 2jfn_A Glutamate racemase; cel 99.8 7.7E-19 2.6E-23 157.7 12.9 129 80-240 21-152 (285)
17 2xed_A Putative maleate isomer 99.6 2.9E-15 9.7E-20 133.8 7.5 134 80-241 25-172 (273)
18 3qvl_A Putative hydantoin race 99.5 2.9E-14 9.9E-19 125.7 11.5 132 82-241 3-134 (245)
19 2dgd_A 223AA long hypothetical 99.5 1.5E-14 5.1E-19 124.3 8.5 122 82-241 7-134 (223)
20 2eq5_A 228AA long hypothetical 99.4 1.2E-13 4.1E-18 118.5 5.9 83 147-240 57-140 (228)
21 3ixl_A Amdase, arylmalonate de 99.4 9.5E-13 3.3E-17 115.5 8.5 88 146-241 44-143 (240)
22 2qh8_A Uncharacterized protein 96.9 0.033 1.1E-06 48.1 15.3 75 157-241 61-170 (302)
23 3out_A Glutamate racemase; str 96.8 0.0092 3.2E-07 52.8 10.6 127 79-225 110-241 (268)
24 3qvl_A Putative hydantoin race 96.7 0.0095 3.2E-07 51.9 10.0 105 80-205 109-214 (245)
25 2gzm_A Glutamate racemase; enz 96.7 0.014 4.7E-07 51.2 10.8 109 79-205 108-218 (267)
26 1zuw_A Glutamate racemase 1; ( 96.5 0.016 5.6E-07 50.9 10.6 108 79-204 109-218 (272)
27 2dwu_A Glutamate racemase; iso 96.4 0.018 6.3E-07 50.7 10.2 108 79-204 112-221 (276)
28 2jfq_A Glutamate racemase; cel 96.4 0.014 4.8E-07 51.8 9.4 108 79-204 127-237 (286)
29 2vvt_A Glutamate racemase; iso 96.1 0.013 4.4E-07 52.1 7.5 108 79-204 129-238 (290)
30 3lft_A Uncharacterized protein 96.0 0.13 4.6E-06 43.9 13.2 75 157-241 54-163 (295)
31 3ist_A Glutamate racemase; str 95.6 0.041 1.4E-06 48.6 8.5 108 79-204 110-219 (269)
32 2oho_A Glutamate racemase; iso 95.2 0.057 1.9E-06 47.3 8.1 107 79-204 117-225 (273)
33 2jfz_A Glutamate racemase; cel 95.2 0.23 8E-06 42.9 11.8 126 79-225 107-241 (255)
34 3o74_A Fructose transport syst 95.1 0.43 1.5E-05 39.5 12.8 121 80-241 2-151 (272)
35 3c3k_A Alanine racemase; struc 94.9 0.33 1.1E-05 41.0 11.8 121 79-241 7-155 (285)
36 1jfl_A Aspartate racemase; alp 94.8 0.077 2.6E-06 44.9 7.6 55 149-205 170-224 (228)
37 1dbq_A Purine repressor; trans 94.8 0.45 1.5E-05 39.8 12.3 76 158-241 56-157 (289)
38 2dgd_A 223AA long hypothetical 94.8 0.11 3.6E-06 43.8 8.2 52 154-205 158-213 (223)
39 3g1w_A Sugar ABC transporter; 94.7 0.56 1.9E-05 39.7 12.7 124 77-240 1-156 (305)
40 3e61_A Putative transcriptiona 94.6 0.84 2.9E-05 37.9 13.5 121 79-241 7-153 (277)
41 3tb6_A Arabinose metabolism tr 94.6 0.67 2.3E-05 38.7 12.9 121 80-241 15-167 (298)
42 2eq5_A 228AA long hypothetical 94.6 0.06 2E-06 45.3 6.1 56 150-205 159-216 (228)
43 1xg4_A Probable methylisocitra 94.4 0.043 1.5E-06 49.3 5.2 105 80-208 119-230 (295)
44 2fep_A Catabolite control prot 94.4 0.43 1.5E-05 40.4 11.2 75 158-241 65-165 (289)
45 3hcw_A Maltose operon transcri 94.3 0.69 2.4E-05 39.2 12.5 125 79-241 6-162 (295)
46 1qpz_A PURA, protein (purine n 94.3 0.63 2.2E-05 40.4 12.5 76 158-241 107-208 (340)
47 3uhf_A Glutamate racemase; str 94.3 0.43 1.5E-05 42.3 11.4 75 149-226 182-258 (274)
48 3kke_A LACI family transcripti 94.3 0.52 1.8E-05 40.2 11.7 121 79-241 14-162 (303)
49 1b73_A Glutamate racemase; iso 94.2 0.027 9.2E-07 48.8 3.3 106 79-205 105-211 (254)
50 3brq_A HTH-type transcriptiona 94.2 0.67 2.3E-05 38.7 11.9 76 158-241 70-170 (296)
51 2xed_A Putative maleate isomer 94.1 0.15 5.2E-06 44.8 7.9 52 154-205 196-250 (273)
52 2rgy_A Transcriptional regulat 94.0 0.77 2.6E-05 38.7 12.0 75 158-241 60-159 (290)
53 3vav_A 3-methyl-2-oxobutanoate 93.9 0.091 3.1E-06 47.0 6.2 43 152-195 173-215 (275)
54 3eoo_A Methylisocitrate lyase; 93.9 0.14 4.8E-06 46.1 7.5 105 80-208 123-234 (298)
55 1zlp_A PSR132, petal death pro 93.8 0.18 6.2E-06 45.8 8.0 105 80-208 141-252 (318)
56 3egc_A Putative ribose operon 93.8 1.3 4.5E-05 37.1 13.1 122 79-241 7-156 (291)
57 2jfn_A Glutamate racemase; cel 93.8 0.22 7.5E-06 43.9 8.4 109 79-205 126-238 (285)
58 3dbi_A Sugar-binding transcrip 93.7 1.2 4.1E-05 38.5 13.1 125 79-241 60-212 (338)
59 3ipc_A ABC transporter, substr 93.7 2.7 9.2E-05 36.1 15.2 77 157-241 61-167 (356)
60 3td9_A Branched chain amino ac 93.7 3 0.0001 36.1 15.5 75 159-241 74-179 (366)
61 3k9c_A Transcriptional regulat 93.7 0.31 1.1E-05 41.3 8.9 119 79-241 11-156 (289)
62 3ixl_A Amdase, arylmalonate de 93.6 0.29 9.8E-06 42.2 8.7 51 155-205 168-222 (240)
63 3b8i_A PA4872 oxaloacetate dec 93.5 0.11 3.6E-06 46.7 5.9 52 156-208 172-229 (287)
64 3d8u_A PURR transcriptional re 93.3 0.41 1.4E-05 39.7 9.1 75 158-241 52-151 (275)
65 3snr_A Extracellular ligand-bi 93.2 0.86 3E-05 39.0 11.1 76 158-241 61-164 (362)
66 3h5o_A Transcriptional regulat 93.2 0.9 3.1E-05 39.4 11.4 76 157-241 110-208 (339)
67 3e3m_A Transcriptional regulat 93.2 1.7 6E-05 37.9 13.3 76 157-241 118-219 (355)
68 3bbl_A Regulatory protein of L 93.2 0.25 8.5E-06 41.8 7.5 74 159-241 58-156 (287)
69 3k4h_A Putative transcriptiona 93.2 1.4 4.6E-05 36.9 12.1 125 79-241 7-162 (292)
70 3gv0_A Transcriptional regulat 93.0 0.7 2.4E-05 38.9 10.2 74 159-241 60-158 (288)
71 3huu_A Transcription regulator 93.0 0.77 2.6E-05 39.0 10.5 125 79-241 21-175 (305)
72 3hut_A Putative branched-chain 92.7 1.9 6.4E-05 37.1 12.6 75 159-241 65-168 (358)
73 2o20_A Catabolite control prot 92.5 1.3 4.3E-05 38.3 11.4 122 79-241 62-211 (332)
74 2h3h_A Sugar ABC transporter, 92.5 3.2 0.00011 35.2 13.7 75 158-241 50-154 (313)
75 1byk_A Protein (trehalose oper 92.4 0.66 2.3E-05 38.2 9.0 74 158-241 51-147 (255)
76 3clk_A Transcription regulator 92.4 0.72 2.5E-05 38.8 9.4 74 159-241 59-156 (290)
77 3s81_A Putative aspartate race 92.4 0.27 9.3E-06 43.2 6.9 55 151-205 195-249 (268)
78 3lye_A Oxaloacetate acetyl hyd 92.3 0.39 1.4E-05 43.4 8.0 105 80-208 128-242 (307)
79 2iks_A DNA-binding transcripti 92.3 0.87 3E-05 38.4 9.8 122 79-241 19-169 (293)
80 4eyg_A Twin-arginine transloca 92.2 2.3 7.9E-05 36.6 12.6 75 159-241 65-168 (368)
81 1m3u_A 3-methyl-2-oxobutanoate 92.1 0.24 8.4E-06 43.9 6.2 43 152-195 161-203 (264)
82 3jy6_A Transcriptional regulat 92.1 2.2 7.5E-05 35.5 12.0 106 79-225 6-133 (276)
83 3ih1_A Methylisocitrate lyase; 91.9 0.55 1.9E-05 42.4 8.4 53 156-208 179-238 (305)
84 1o66_A 3-methyl-2-oxobutanoate 91.7 0.23 7.8E-06 44.4 5.5 42 153-195 162-203 (275)
85 2fvy_A D-galactose-binding per 91.7 5.2 0.00018 33.4 14.2 35 158-193 52-89 (309)
86 2qiw_A PEP phosphonomutase; st 91.7 0.7 2.4E-05 40.5 8.6 97 93-208 125-231 (255)
87 2qu7_A Putative transcriptiona 91.6 0.53 1.8E-05 39.5 7.6 118 80-241 8-153 (288)
88 3gbv_A Putative LACI-family tr 91.6 2.1 7.1E-05 35.7 11.3 127 79-240 7-169 (304)
89 4evq_A Putative ABC transporte 91.5 1.2 4.2E-05 38.5 10.0 75 159-241 75-180 (375)
90 3sg0_A Extracellular ligand-bi 91.3 2 6.8E-05 37.1 11.2 76 158-241 81-188 (386)
91 1oy0_A Ketopantoate hydroxymet 91.3 0.26 9E-06 44.1 5.5 43 152-195 179-221 (281)
92 3bil_A Probable LACI-family tr 91.3 2.2 7.6E-05 37.2 11.6 122 79-241 65-215 (348)
93 3eaf_A ABC transporter, substr 91.2 2.4 8.2E-05 37.3 11.8 74 159-241 69-171 (391)
94 3l49_A ABC sugar (ribose) tran 91.2 5.7 0.00019 32.9 15.1 119 79-239 4-154 (291)
95 3lkb_A Probable branched-chain 91.2 2.7 9.2E-05 36.8 12.0 75 158-241 67-172 (392)
96 3lop_A Substrate binding perip 91.2 3.3 0.00011 35.8 12.5 75 159-241 66-170 (364)
97 3o1i_D Periplasmic protein TOR 90.9 1.6 5.6E-05 36.5 10.0 126 80-240 5-166 (304)
98 3kjx_A Transcriptional regulat 90.8 1 3.6E-05 39.1 8.9 76 157-241 116-217 (344)
99 2x7x_A Sensor protein; transfe 90.5 3.4 0.00012 35.4 11.9 118 80-239 6-157 (325)
100 3rot_A ABC sugar transporter, 90.1 5.4 0.00018 33.5 12.6 125 80-241 3-161 (297)
101 2rjo_A Twin-arginine transloca 90.0 4.3 0.00015 34.8 12.0 74 158-240 54-167 (332)
102 3brs_A Periplasmic binding pro 89.9 5.4 0.00018 33.1 12.3 75 158-240 58-161 (289)
103 3n0w_A ABC branched chain amin 89.9 6.2 0.00021 34.3 13.2 75 159-241 66-171 (379)
104 3i09_A Periplasmic branched-ch 89.8 5.3 0.00018 34.6 12.6 75 159-241 64-169 (375)
105 2vk2_A YTFQ, ABC transporter p 89.7 5.3 0.00018 33.7 12.3 77 158-240 51-158 (306)
106 1jye_A Lactose operon represso 88.7 5.6 0.00019 34.5 12.0 75 158-241 111-210 (349)
107 2ioy_A Periplasmic sugar-bindi 87.7 5 0.00017 33.5 10.6 74 158-240 50-154 (283)
108 3fa4_A 2,3-dimethylmalate lyas 87.6 1.3 4.4E-05 39.9 7.1 105 80-208 120-234 (302)
109 3ojc_A Putative aspartate/glut 87.5 0.65 2.2E-05 39.6 4.9 55 149-205 174-228 (231)
110 3i45_A Twin-arginine transloca 87.4 9.5 0.00032 33.2 12.7 73 159-239 66-169 (387)
111 2dri_A D-ribose-binding protei 87.4 4 0.00014 33.8 9.8 77 158-241 50-154 (271)
112 2ze3_A DFA0005; organic waste 87.1 0.77 2.6E-05 40.7 5.3 99 90-208 121-227 (275)
113 2zsk_A PH1733, 226AA long hypo 87.1 0.59 2E-05 39.3 4.4 52 152-205 171-223 (226)
114 3ctp_A Periplasmic binding pro 86.8 4.4 0.00015 34.8 10.0 119 79-241 59-203 (330)
115 2hjp_A Phosphonopyruvate hydro 86.7 1.4 4.9E-05 39.3 6.9 106 80-208 115-230 (290)
116 2hsg_A Glucose-resistance amyl 86.5 1.3 4.5E-05 38.1 6.4 75 158-241 109-209 (332)
117 4fe7_A Xylose operon regulator 86.4 2.4 8.1E-05 38.1 8.3 115 80-241 25-172 (412)
118 3hs3_A Ribose operon repressor 86.3 2.9 9.8E-05 34.9 8.3 121 79-241 9-153 (277)
119 3jvd_A Transcriptional regulat 85.6 4.3 0.00015 35.1 9.4 116 79-241 63-205 (333)
120 3m9w_A D-xylose-binding peripl 85.4 9.4 0.00032 32.2 11.3 73 158-239 51-152 (313)
121 3h5t_A Transcriptional regulat 85.1 2.6 9E-05 36.8 7.8 75 158-241 121-237 (366)
122 3miz_A Putative transcriptiona 84.6 1.9 6.6E-05 36.3 6.4 76 157-241 62-162 (301)
123 1usg_A Leucine-specific bindin 83.6 19 0.00065 30.3 13.5 74 159-241 63-167 (346)
124 3ksm_A ABC-type sugar transpor 83.2 17 0.00058 29.5 12.9 74 157-239 50-156 (276)
125 3qk7_A Transcriptional regulat 82.9 6 0.00021 33.2 8.9 124 79-241 5-157 (294)
126 2fn9_A Ribose ABC transporter, 82.6 19 0.00066 29.7 13.6 35 80-117 2-39 (290)
127 3uug_A Multiple sugar-binding 81.8 22 0.00076 29.9 12.7 65 80-176 3-70 (330)
128 1s2w_A Phosphoenolpyruvate pho 81.6 4 0.00014 36.4 7.5 106 80-208 119-233 (295)
129 3cs3_A Sugar-binding transcrip 81.3 11 0.00038 31.1 9.9 38 196-241 107-149 (277)
130 1jx6_A LUXP protein; protein-l 80.6 26 0.00088 29.8 13.6 74 158-240 97-204 (342)
131 2h0a_A TTHA0807, transcription 79.4 2.4 8.2E-05 35.0 5.0 74 159-241 49-150 (276)
132 3r7f_A Aspartate carbamoyltran 79.2 5.8 0.0002 35.6 7.8 65 154-223 81-155 (304)
133 8abp_A L-arabinose-binding pro 78.6 21 0.00073 29.5 10.9 81 157-241 49-164 (306)
134 3l6u_A ABC-type sugar transpor 78.6 12 0.00043 30.8 9.3 126 79-240 7-166 (293)
135 3gyb_A Transcriptional regulat 77.8 7 0.00024 32.2 7.5 71 159-241 54-147 (280)
136 1gud_A ALBP, D-allose-binding 77.6 13 0.00043 31.1 9.1 73 159-240 53-164 (288)
137 1pea_A Amidase operon; gene re 77.3 14 0.00046 32.2 9.5 75 158-241 67-169 (385)
138 1tjy_A Sugar transport protein 76.1 21 0.00071 30.3 10.3 20 158-177 53-72 (316)
139 3h75_A Periplasmic sugar-bindi 75.7 26 0.00089 30.0 10.8 43 197-240 128-175 (350)
140 1ivn_A Thioesterase I; hydrola 75.6 16 0.00053 28.4 8.6 90 87-195 40-140 (190)
141 3g85_A Transcriptional regulat 72.6 7.2 0.00025 32.3 6.2 73 160-241 63-158 (289)
142 3tdn_A FLR symmetric alpha-bet 70.0 20 0.00069 29.9 8.5 73 156-237 39-123 (247)
143 3kwl_A Uncharacterized protein 69.7 5.8 0.0002 37.8 5.5 57 146-202 429-494 (514)
144 2h4a_A YRAM (HI1655); perplasm 69.7 57 0.0019 28.5 11.9 76 157-240 48-150 (325)
145 3noy_A 4-hydroxy-3-methylbut-2 69.0 7.1 0.00024 36.1 5.7 37 156-192 50-88 (366)
146 3qek_A NMDA glutamate receptor 69.0 29 0.00099 30.1 9.6 77 156-240 56-167 (384)
147 3hgj_A Chromate reductase; TIM 69.0 63 0.0022 28.8 12.5 120 90-240 197-336 (349)
148 3q58_A N-acetylmannosamine-6-p 68.9 17 0.00059 30.7 7.9 59 154-223 38-110 (229)
149 3mil_A Isoamyl acetate-hydroly 68.7 29 0.00098 27.5 8.9 78 82-173 43-121 (240)
150 3oow_A Phosphoribosylaminoimid 67.7 11 0.00036 31.2 6.0 83 82-195 7-90 (166)
151 2q5c_A NTRC family transcripti 65.9 17 0.00058 30.0 7.0 62 157-229 44-108 (196)
152 4fb5_A Probable oxidoreductase 65.6 29 0.00099 30.2 8.9 105 73-197 16-133 (393)
153 1thf_D HISF protein; thermophI 65.4 34 0.0012 28.3 8.9 74 157-239 35-120 (253)
154 3hp4_A GDSL-esterase; psychrot 64.6 31 0.0011 26.3 8.1 95 82-195 38-144 (185)
155 1u11_A PURE (N5-carboxyaminoim 64.2 13 0.00046 31.1 6.0 86 80-196 21-107 (182)
156 3lp6_A Phosphoribosylaminoimid 64.1 22 0.00076 29.5 7.3 85 80-195 7-92 (174)
157 3hsy_A Glutamate receptor 2; l 63.6 73 0.0025 27.6 11.9 73 159-240 54-148 (376)
158 3igs_A N-acetylmannosamine-6-p 62.7 28 0.00097 29.4 8.0 59 154-223 38-110 (232)
159 3h5l_A Putative branched-chain 62.3 80 0.0027 27.5 13.0 26 216-241 165-193 (419)
160 3ckm_A YRAM (HI1655), LPOA; pe 61.3 75 0.0026 26.9 11.7 75 158-240 51-152 (327)
161 3trh_A Phosphoribosylaminoimid 60.5 26 0.0009 28.9 7.1 84 81-195 7-91 (169)
162 3saj_A Glutamate receptor 1; r 60.0 86 0.0029 27.2 11.6 75 157-240 59-155 (384)
163 3lkv_A Uncharacterized conserv 59.7 81 0.0028 26.8 14.0 79 155-241 59-170 (302)
164 2y88_A Phosphoribosyl isomeras 59.5 37 0.0013 27.9 8.1 73 157-238 36-119 (244)
165 3dzc_A UDP-N-acetylglucosamine 59.3 97 0.0033 27.5 11.6 113 79-194 24-141 (396)
166 4f11_A Gamma-aminobutyric acid 59.2 92 0.0032 27.3 12.0 74 159-240 78-182 (433)
167 1gvf_A Tagatose-bisphosphate a 58.1 12 0.0004 33.3 4.9 53 156-208 159-227 (286)
168 3gr7_A NADPH dehydrogenase; fl 58.0 65 0.0022 28.7 9.9 77 155-240 232-325 (340)
169 4b4k_A N5-carboxyaminoimidazol 57.9 24 0.00083 29.5 6.5 82 82-195 24-107 (181)
170 1qop_A Tryptophan synthase alp 57.5 37 0.0012 29.1 7.9 15 157-171 36-50 (268)
171 3obb_A Probable 3-hydroxyisobu 57.5 76 0.0026 27.6 10.1 13 79-92 2-14 (300)
172 4g9p_A 4-hydroxy-3-methylbut-2 57.2 16 0.00055 34.2 5.8 36 158-193 44-86 (406)
173 4hf7_A Putative acylhydrolase; 56.5 72 0.0025 25.2 9.6 94 88-197 57-169 (209)
174 3tsm_A IGPS, indole-3-glycerol 55.6 37 0.0013 29.7 7.7 62 156-225 83-153 (272)
175 3kuu_A Phosphoribosylaminoimid 55.1 27 0.00091 29.0 6.2 84 81-195 13-97 (174)
176 3ors_A N5-carboxyaminoimidazol 54.2 25 0.00086 28.8 5.9 84 81-195 4-88 (163)
177 3eag_A UDP-N-acetylmuramate:L- 53.9 55 0.0019 28.5 8.6 67 164-240 65-134 (326)
178 1h5y_A HISF; histidine biosynt 53.5 66 0.0022 26.0 8.6 75 155-238 36-122 (253)
179 2pju_A Propionate catabolism o 53.5 26 0.00088 29.8 6.1 59 160-228 58-119 (225)
180 1xmp_A PURE, phosphoribosylami 53.4 30 0.001 28.6 6.3 85 81-196 12-97 (170)
181 1rvg_A Fructose-1,6-bisphospha 53.3 12 0.00043 33.5 4.3 51 156-206 157-225 (305)
182 4h08_A Putative hydrolase; GDS 53.2 77 0.0026 24.5 9.8 52 146-197 90-162 (200)
183 1vzw_A Phosphoribosyl isomeras 53.1 69 0.0024 26.3 8.7 73 157-238 37-120 (244)
184 3rjt_A Lipolytic protein G-D-S 52.4 77 0.0026 24.3 9.1 108 83-199 56-179 (216)
185 3s99_A Basic membrane lipoprot 51.8 86 0.0029 28.0 9.7 31 76-106 145-175 (356)
186 1zjj_A Hypothetical protein PH 50.8 1E+02 0.0035 25.2 9.8 64 155-226 23-94 (263)
187 1qv9_A F420-dependent methylen 50.6 58 0.002 28.7 7.9 102 80-206 3-113 (283)
188 3vnd_A TSA, tryptophan synthas 50.1 72 0.0025 27.7 8.6 13 109-121 19-31 (267)
189 1mzh_A Deoxyribose-phosphate a 49.9 33 0.0011 28.7 6.2 60 154-223 134-206 (225)
190 4es6_A Uroporphyrinogen-III sy 49.4 24 0.00081 29.5 5.2 60 160-228 180-244 (254)
191 3lk7_A UDP-N-acetylmuramoylala 48.8 89 0.003 28.5 9.5 63 166-240 73-138 (451)
192 3q94_A Fructose-bisphosphate a 48.5 21 0.00073 31.7 5.0 53 156-208 163-231 (288)
193 2ekc_A AQ_1548, tryptophan syn 48.0 80 0.0027 26.8 8.5 17 156-172 35-51 (262)
194 1jvn_A Glutamine, bifunctional 48.0 67 0.0023 30.6 8.8 64 154-226 282-371 (555)
195 2fqx_A Membrane lipoprotein TM 48.0 48 0.0016 28.5 7.1 37 158-194 55-92 (318)
196 2gou_A Oxidoreductase, FMN-bin 48.0 24 0.00083 31.9 5.4 43 154-196 252-301 (365)
197 4grd_A N5-CAIR mutase, phospho 47.5 48 0.0016 27.5 6.6 84 80-195 12-97 (173)
198 3qi7_A Putative transcriptiona 47.2 56 0.0019 30.0 7.7 74 158-241 104-189 (371)
199 4had_A Probable oxidoreductase 47.0 23 0.00078 30.8 4.9 110 73-206 16-137 (350)
200 4f06_A Extracellular ligand-bi 46.0 83 0.0028 27.1 8.5 75 159-241 65-168 (371)
201 1h5y_A HISF; histidine biosynt 45.8 1.1E+02 0.0039 24.5 8.8 75 158-241 160-249 (253)
202 3ot5_A UDP-N-acetylglucosamine 45.7 1.6E+02 0.0056 26.2 10.6 110 82-195 29-145 (403)
203 2inf_A URO-D, UPD, uroporphyri 45.7 34 0.0012 30.3 6.0 44 149-194 228-271 (359)
204 1ep3_A Dihydroorotate dehydrog 45.6 1.2E+02 0.0041 25.7 9.3 69 156-233 180-281 (311)
205 3gd5_A Otcase, ornithine carba 45.6 42 0.0014 30.2 6.5 65 154-224 93-166 (323)
206 1o4v_A Phosphoribosylaminoimid 45.3 34 0.0012 28.6 5.4 86 80-196 13-99 (183)
207 3kg2_A Glutamate receptor 2; I 45.3 2.1E+02 0.0073 27.4 13.1 75 157-240 52-148 (823)
208 3qja_A IGPS, indole-3-glycerol 45.0 1E+02 0.0035 26.7 8.8 54 155-208 75-137 (272)
209 4ep1_A Otcase, ornithine carba 45.0 48 0.0017 30.1 6.9 65 154-224 115-188 (340)
210 1vyr_A Pentaerythritol tetrani 44.9 27 0.00092 31.6 5.2 43 154-196 253-302 (364)
211 4ekn_B Aspartate carbamoyltran 44.2 74 0.0025 28.3 7.9 64 154-223 86-159 (306)
212 3rg8_A Phosphoribosylaminoimid 44.1 71 0.0024 26.0 7.1 84 81-195 3-88 (159)
213 3i65_A Dihydroorotate dehydrog 44.0 1.1E+02 0.0037 28.5 9.2 64 154-228 285-380 (415)
214 3p94_A GDSL-like lipase; serin 44.0 1E+02 0.0036 23.4 8.1 95 88-198 53-165 (204)
215 2w6r_A Imidazole glycerol phos 43.8 60 0.0021 27.0 7.0 52 156-208 34-98 (266)
216 1f76_A Dihydroorotate dehydrog 43.8 1E+02 0.0036 26.8 8.8 73 154-235 227-332 (336)
217 3d02_A Putative LACI-type tran 43.6 94 0.0032 25.4 8.1 33 79-114 3-38 (303)
218 1vc4_A Indole-3-glycerol phosp 43.5 1.1E+02 0.0038 26.0 8.7 71 156-237 69-148 (254)
219 3nvt_A 3-deoxy-D-arabino-heptu 43.5 35 0.0012 31.4 5.8 99 87-193 88-211 (385)
220 3p9z_A Uroporphyrinogen III co 43.4 19 0.00064 29.9 3.6 59 160-228 156-215 (229)
221 3re1_A Uroporphyrinogen-III sy 43.3 26 0.00091 29.7 4.7 60 160-228 188-252 (269)
222 3va7_A KLLA0E08119P; carboxyla 42.6 1.8E+02 0.0063 30.7 11.7 40 159-198 97-138 (1236)
223 3ipc_A ABC transporter, substr 42.1 1.3E+02 0.0043 25.3 8.9 37 159-195 187-226 (356)
224 3csu_A Protein (aspartate carb 42.0 56 0.0019 29.2 6.7 71 154-230 88-172 (310)
225 1r3s_A URO-D, uroporphyrinogen 41.1 52 0.0018 29.2 6.5 45 149-195 232-283 (367)
226 3nav_A Tryptophan synthase alp 41.1 1.1E+02 0.0038 26.5 8.4 13 109-121 21-33 (271)
227 2eja_A URO-D, UPD, uroporphyri 40.5 50 0.0017 28.9 6.2 44 149-194 214-258 (338)
228 1ka9_F Imidazole glycerol phos 40.1 1.4E+02 0.0048 24.4 8.6 74 156-238 35-120 (252)
229 4gqa_A NAD binding oxidoreduct 39.7 1.6E+02 0.0054 26.1 9.5 28 161-188 92-122 (412)
230 1z41_A YQJM, probable NADH-dep 39.7 1.2E+02 0.0041 26.7 8.6 75 154-237 231-322 (338)
231 3l21_A DHDPS, dihydrodipicolin 39.5 1.1E+02 0.0037 26.7 8.2 61 156-225 101-179 (304)
232 3zwt_A Dihydroorotate dehydrog 39.3 96 0.0033 28.0 8.0 63 154-227 236-332 (367)
233 3p9x_A Phosphoribosylglycinami 39.2 70 0.0024 26.9 6.6 102 80-194 2-109 (211)
234 2r14_A Morphinone reductase; H 39.0 35 0.0012 31.0 4.9 43 154-196 257-307 (377)
235 3vot_A L-amino acid ligase, BL 37.8 2E+02 0.0067 25.5 9.8 46 145-193 58-103 (425)
236 3n0v_A Formyltetrahydrofolate 37.8 1.9E+02 0.0063 25.3 9.4 101 80-194 90-194 (286)
237 3kc2_A Uncharacterized protein 37.6 42 0.0014 30.1 5.2 71 155-241 35-113 (352)
238 1o5k_A DHDPS, dihydrodipicolin 37.6 97 0.0033 27.1 7.5 81 83-192 50-142 (306)
239 1jub_A Dihydroorotate dehydrog 37.2 1.4E+02 0.0049 25.5 8.5 64 154-227 174-276 (311)
240 1xky_A Dihydrodipicolinate syn 36.9 1.1E+02 0.0036 26.7 7.7 36 157-192 99-142 (301)
241 3lou_A Formyltetrahydrofolate 36.9 1.9E+02 0.0065 25.3 9.3 101 80-194 95-199 (292)
242 3b0p_A TRNA-dihydrouridine syn 36.5 45 0.0015 29.8 5.3 43 154-196 146-205 (350)
243 3flu_A DHDPS, dihydrodipicolin 36.5 1E+02 0.0035 26.8 7.5 37 156-192 93-137 (297)
244 2hqb_A Transcriptional activat 36.3 63 0.0021 27.3 6.0 38 157-194 55-93 (296)
245 3rsc_A CALG2; TDP, enediyne, s 36.2 84 0.0029 27.2 6.9 41 154-195 107-147 (415)
246 3s5o_A 4-hydroxy-2-oxoglutarat 36.0 1.2E+02 0.0042 26.4 7.9 61 156-225 100-180 (307)
247 2r8w_A AGR_C_1641P; APC7498, d 35.7 84 0.0029 27.9 6.9 36 157-192 121-164 (332)
248 3cpr_A Dihydrodipicolinate syn 35.2 1E+02 0.0035 26.9 7.3 36 157-192 103-146 (304)
249 4ab4_A Xenobiotic reductase B; 34.9 1.3E+02 0.0043 27.2 8.0 72 154-234 244-320 (362)
250 1tv5_A Dhodehase, dihydroorota 34.9 1.7E+02 0.0059 27.2 9.1 64 154-227 313-407 (443)
251 1q77_A Hypothetical protein AQ 34.9 28 0.00097 25.4 3.1 33 159-192 103-135 (138)
252 4f2g_A Otcase 1, ornithine car 34.9 50 0.0017 29.5 5.2 64 154-223 90-162 (309)
253 3o9z_A Lipopolysaccaride biosy 34.8 1.5E+02 0.005 25.6 8.2 40 145-186 54-96 (312)
254 2v9d_A YAGE; dihydrodipicolini 34.5 1.2E+02 0.004 27.1 7.7 47 157-203 118-182 (343)
255 3tak_A DHDPS, dihydrodipicolin 34.4 1.2E+02 0.0039 26.3 7.5 37 156-192 87-131 (291)
256 2r91_A 2-keto-3-deoxy-(6-phosp 34.1 49 0.0017 28.6 4.9 36 157-192 82-126 (286)
257 3aty_A Tcoye, prostaglandin F2 34.1 49 0.0017 30.1 5.2 119 86-234 218-348 (379)
258 3gka_A N-ethylmaleimide reduct 33.8 1.5E+02 0.005 26.8 8.3 73 154-235 252-329 (361)
259 3d6n_B Aspartate carbamoyltran 33.7 20 0.0007 31.8 2.4 74 154-232 79-166 (291)
260 3o1l_A Formyltetrahydrofolate 33.7 1.9E+02 0.0065 25.5 8.8 102 79-194 104-209 (302)
261 3grf_A Ornithine carbamoyltran 33.4 28 0.00097 31.4 3.4 41 154-196 90-130 (328)
262 3n9r_A Fructose-bisphosphate a 33.3 40 0.0014 30.2 4.3 37 156-192 159-208 (307)
263 1zq6_A Otcase, ornithine carba 33.3 45 0.0015 30.5 4.7 42 154-196 115-165 (359)
264 4dgk_A Phytoene dehydrogenase; 33.0 14 0.00049 33.5 1.3 21 80-100 1-22 (501)
265 3tpf_A Otcase, ornithine carba 32.8 45 0.0016 29.7 4.6 64 154-223 81-154 (307)
266 3ia7_A CALG4; glycosysltransfe 32.6 2.2E+02 0.0076 24.1 9.0 41 154-195 91-131 (402)
267 3iz5_f 60S ribosomal protein L 32.6 64 0.0022 24.3 4.8 40 155-194 32-74 (112)
268 3ks9_A Mglur1, metabotropic gl 32.6 2E+02 0.0069 26.2 9.2 71 163-241 126-226 (496)
269 3d8t_A Uroporphyrinogen-III sy 32.5 32 0.0011 29.4 3.4 50 159-208 202-260 (286)
270 1geq_A Tryptophan synthase alp 32.4 1.8E+02 0.0062 23.8 8.1 15 180-194 72-86 (248)
271 1yxy_A Putative N-acetylmannos 32.3 1.7E+02 0.0059 23.7 7.9 36 155-193 39-74 (234)
272 1vdm_A Purine phosphoribosyltr 32.1 1.1E+02 0.0039 23.1 6.4 93 146-240 7-110 (153)
273 3nrb_A Formyltetrahydrofolate 32.0 99 0.0034 27.1 6.6 102 79-194 87-193 (287)
274 3mw8_A Uroporphyrinogen-III sy 31.6 30 0.001 28.6 3.0 60 160-228 167-232 (240)
275 4a8t_A Putrescine carbamoyltra 31.5 57 0.002 29.5 5.1 66 154-224 108-184 (339)
276 3td9_A Branched chain amino ac 31.4 1.4E+02 0.0048 25.2 7.4 36 159-194 198-236 (366)
277 3oa2_A WBPB; oxidoreductase, s 31.3 99 0.0034 26.7 6.5 38 145-186 54-97 (318)
278 3r2g_A Inosine 5'-monophosphat 31.2 1.1E+02 0.0037 27.9 6.9 53 156-208 103-164 (361)
279 3gkn_A Bacterioferritin comigr 31.0 1.2E+02 0.0042 22.4 6.4 56 149-206 53-109 (163)
280 3l5l_A Xenobiotic reductase A; 30.6 2.9E+02 0.0098 24.5 13.2 121 90-240 203-343 (363)
281 4h3v_A Oxidoreductase domain p 30.6 98 0.0033 26.7 6.4 37 161-197 71-114 (390)
282 1qo2_A Molecule: N-((5-phospho 30.6 1.2E+02 0.004 24.9 6.6 69 156-235 34-115 (241)
283 2ftp_A Hydroxymethylglutaryl-C 30.4 1.2E+02 0.0041 26.3 6.9 55 154-208 161-230 (302)
284 1jcn_A Inosine monophosphate d 30.3 1.2E+02 0.0042 28.2 7.4 51 157-208 309-382 (514)
285 2vpq_A Acetyl-COA carboxylase; 30.3 2.6E+02 0.0091 24.8 9.4 35 160-194 68-104 (451)
286 2isw_A Putative fructose-1,6-b 30.2 49 0.0017 29.9 4.3 37 156-192 157-208 (323)
287 2nuw_A 2-keto-3-deoxygluconate 30.0 52 0.0018 28.5 4.4 36 157-192 83-127 (288)
288 1yzf_A Lipase/acylhydrolase; s 29.6 1.7E+02 0.006 21.7 8.6 93 88-199 46-154 (195)
289 1wcw_A Uroporphyrinogen III sy 29.5 34 0.0012 28.4 3.0 50 159-208 177-235 (261)
290 2ojp_A DHDPS, dihydrodipicolin 29.5 1E+02 0.0035 26.6 6.3 36 157-192 88-131 (292)
291 3s99_A Basic membrane lipoprot 29.3 76 0.0026 28.3 5.5 38 157-194 78-116 (356)
292 1oth_A Protein (ornithine tran 29.3 66 0.0023 28.8 5.0 64 154-223 91-163 (321)
293 2xzm_U Ribosomal protein L7AE 29.2 84 0.0029 24.2 5.0 40 155-194 30-73 (126)
294 1p3d_A UDP-N-acetylmuramate--a 29.0 1E+02 0.0034 28.3 6.4 66 164-240 76-144 (475)
295 2pv7_A T-protein [includes: ch 29.0 25 0.00086 30.3 2.2 17 80-96 21-37 (298)
296 3o21_A Glutamate receptor 3; p 28.8 1.9E+02 0.0067 25.1 8.1 73 159-240 63-157 (389)
297 2e6f_A Dihydroorotate dehydrog 28.4 1.6E+02 0.0053 25.3 7.3 64 154-227 176-278 (314)
298 1xky_A Dihydrodipicolinate syn 28.3 83 0.0028 27.4 5.5 34 142-179 27-60 (301)
299 2yxg_A DHDPS, dihydrodipicolin 28.3 68 0.0023 27.7 4.9 41 152-192 82-130 (289)
300 3b4u_A Dihydrodipicolinate syn 28.2 1.2E+02 0.0041 26.2 6.5 81 83-192 41-137 (294)
301 2xhf_A Peroxiredoxin 5; oxidor 28.1 85 0.0029 25.2 5.1 52 154-207 65-120 (171)
302 4gnr_A ABC transporter substra 28.0 2.6E+02 0.009 23.3 8.8 35 159-193 68-104 (353)
303 2yvq_A Carbamoyl-phosphate syn 28.0 70 0.0024 24.8 4.5 30 186-226 19-59 (143)
304 2wkj_A N-acetylneuraminate lya 27.6 1.2E+02 0.0042 26.3 6.5 36 157-192 98-142 (303)
305 3flu_A DHDPS, dihydrodipicolin 27.5 89 0.003 27.1 5.5 34 142-179 22-55 (297)
306 3sho_A Transcriptional regulat 27.4 2.1E+02 0.0072 22.0 9.9 94 73-180 32-129 (187)
307 3v7q_A Probable ribosomal prot 27.4 95 0.0033 22.6 4.9 48 156-205 26-76 (101)
308 2lbw_A H/ACA ribonucleoprotein 27.4 84 0.0029 23.8 4.7 49 155-205 26-78 (121)
309 1ep3_A Dihydroorotate dehydrog 27.4 1.3E+02 0.0044 25.5 6.5 55 154-208 113-191 (311)
310 2ehh_A DHDPS, dihydrodipicolin 27.3 74 0.0025 27.6 4.9 41 152-192 82-130 (294)
311 3lkv_A Uncharacterized conserv 27.3 2.8E+02 0.0094 23.3 9.8 89 78-198 138-230 (302)
312 2fqx_A Membrane lipoprotein TM 27.2 2.5E+02 0.0086 23.8 8.4 26 81-106 130-155 (318)
313 3db2_A Putative NADPH-dependen 27.1 2.3E+02 0.0078 24.5 8.2 16 161-176 62-77 (354)
314 1j6u_A UDP-N-acetylmuramate-al 27.1 1.7E+02 0.0057 26.9 7.6 66 165-240 71-140 (469)
315 3na8_A Putative dihydrodipicol 26.9 74 0.0025 28.0 4.9 61 156-225 110-189 (315)
316 1y0e_A Putative N-acetylmannos 26.8 2.4E+02 0.0083 22.5 8.5 36 154-192 25-60 (223)
317 1js1_X Transcarbamylase; alpha 26.8 66 0.0023 28.9 4.6 42 154-196 93-143 (324)
318 2rfg_A Dihydrodipicolinate syn 26.6 77 0.0026 27.6 4.9 41 152-192 82-130 (297)
319 2i6u_A Otcase, ornithine carba 26.6 63 0.0021 28.8 4.4 72 154-231 84-166 (307)
320 4avf_A Inosine-5'-monophosphat 26.6 1.6E+02 0.0053 27.6 7.3 53 156-208 232-293 (490)
321 1twd_A Copper homeostasis prot 26.6 62 0.0021 28.3 4.2 75 159-239 15-113 (256)
322 2vc6_A MOSA, dihydrodipicolina 26.5 97 0.0033 26.8 5.5 41 152-192 82-130 (292)
323 1k7c_A Rhamnogalacturonan acet 26.4 1.1E+02 0.0037 24.8 5.6 54 149-202 109-177 (233)
324 1ydn_A Hydroxymethylglutaryl-C 26.3 2E+02 0.0069 24.5 7.6 55 154-208 157-226 (295)
325 2ef0_A Ornithine carbamoyltran 26.3 62 0.0021 28.8 4.2 71 154-230 90-170 (301)
326 4a18_G RPL30; ribosome, eukary 26.3 69 0.0023 23.5 3.9 50 155-205 28-80 (104)
327 4h31_A Otcase, ornithine carba 26.2 77 0.0026 28.7 5.0 39 154-194 115-153 (358)
328 1ps9_A 2,4-dienoyl-COA reducta 26.2 2.4E+02 0.0084 26.8 8.8 70 155-233 231-321 (671)
329 4a8p_A Putrescine carbamoyltra 26.2 60 0.0021 29.6 4.2 66 154-224 86-162 (355)
330 3m5v_A DHDPS, dihydrodipicolin 26.0 83 0.0029 27.4 5.1 62 156-225 94-173 (301)
331 2h31_A Multifunctional protein 26.0 2E+02 0.0068 26.9 7.8 85 81-196 266-352 (425)
332 1ypf_A GMP reductase; GUAC, pu 26.0 79 0.0027 27.9 4.9 61 156-226 161-243 (336)
333 3na8_A Putative dihydrodipicol 25.9 79 0.0027 27.8 4.9 34 142-179 39-72 (315)
334 1pvv_A Otcase, ornithine carba 25.9 63 0.0021 28.9 4.2 71 154-230 91-171 (315)
335 3obi_A Formyltetrahydrofolate 25.9 2.1E+02 0.0071 24.9 7.6 102 79-194 88-194 (288)
336 3lop_A Substrate binding perip 25.8 2.9E+02 0.01 23.1 9.3 37 159-195 190-229 (364)
337 3v7e_A Ribosome-associated pro 25.7 51 0.0017 23.3 3.0 49 155-205 17-68 (82)
338 2nx9_A Oxaloacetate decarboxyl 25.7 1.9E+02 0.0064 27.1 7.7 56 153-208 159-228 (464)
339 2p2s_A Putative oxidoreductase 25.7 2.7E+02 0.0094 23.7 8.4 26 161-186 62-90 (336)
340 2yv4_A Hypothetical protein PH 25.7 1.2E+02 0.0042 22.4 5.2 44 145-188 52-99 (105)
341 3dz1_A Dihydrodipicolinate syn 25.5 86 0.0029 27.5 5.1 34 142-179 23-56 (313)
342 3qze_A DHDPS, dihydrodipicolin 25.5 99 0.0034 27.2 5.5 34 142-179 38-71 (314)
343 1icp_A OPR1, 12-oxophytodienoa 25.4 51 0.0018 29.8 3.7 73 154-235 258-343 (376)
344 3d0c_A Dihydrodipicolinate syn 25.4 75 0.0026 27.9 4.7 36 157-192 98-141 (314)
345 1pg5_A Aspartate carbamoyltran 25.3 67 0.0023 28.5 4.3 71 154-230 84-167 (299)
346 4ew6_A D-galactose-1-dehydroge 25.3 1.1E+02 0.0039 26.5 5.8 21 82-103 27-47 (330)
347 3si9_A DHDPS, dihydrodipicolin 25.2 82 0.0028 27.8 4.9 41 152-192 104-152 (315)
348 1dxh_A Ornithine carbamoyltran 25.2 84 0.0029 28.3 5.0 73 154-231 90-173 (335)
349 3m2t_A Probable dehydrogenase; 25.1 1.1E+02 0.0039 26.7 5.9 21 81-102 6-26 (359)
350 3fkr_A L-2-keto-3-deoxyarabona 25.1 2.2E+02 0.0076 24.8 7.7 62 156-225 94-176 (309)
351 3ouz_A Biotin carboxylase; str 25.1 2.2E+02 0.0075 25.4 7.9 34 80-119 6-39 (446)
352 2wkj_A N-acetylneuraminate lya 25.1 88 0.003 27.3 5.0 34 142-179 26-59 (303)
353 3qze_A DHDPS, dihydrodipicolin 25.1 83 0.0028 27.7 4.9 61 156-225 109-187 (314)
354 3lq1_A 2-succinyl-5-enolpyruvy 25.1 1.2E+02 0.0041 28.6 6.3 77 152-232 12-90 (578)
355 3qel_B Glutamate [NMDA] recept 25.0 1.8E+02 0.006 25.4 7.0 41 154-194 52-96 (364)
356 1vrd_A Inosine-5'-monophosphat 25.0 2.3E+02 0.0077 26.1 8.1 53 156-208 240-301 (494)
357 3tak_A DHDPS, dihydrodipicolin 24.9 96 0.0033 26.8 5.2 34 142-179 16-49 (291)
358 3eb2_A Putative dihydrodipicol 24.8 75 0.0025 27.7 4.5 61 156-225 90-168 (300)
359 3kru_A NADH:flavin oxidoreduct 24.8 2.6E+02 0.0088 24.9 8.2 94 90-206 188-299 (343)
360 2w37_A Ornithine carbamoyltran 24.8 86 0.003 28.6 5.0 72 154-231 112-194 (359)
361 4fxs_A Inosine-5'-monophosphat 24.7 2.3E+02 0.0078 26.5 8.1 52 157-208 235-295 (496)
362 3j21_Z 50S ribosomal protein L 24.6 1.3E+02 0.0045 21.6 5.2 39 156-194 22-63 (99)
363 3l21_A DHDPS, dihydrodipicolin 24.6 88 0.003 27.4 4.9 34 142-179 30-63 (304)
364 2f00_A UDP-N-acetylmuramate--L 24.6 1.1E+02 0.0038 28.2 5.9 66 164-240 77-145 (491)
365 3sds_A Ornithine carbamoyltran 24.3 80 0.0027 28.7 4.7 41 154-196 111-151 (353)
366 1w3i_A EDA, 2-keto-3-deoxy glu 24.3 62 0.0021 28.1 3.8 41 152-192 78-127 (293)
367 3m5v_A DHDPS, dihydrodipicolin 24.3 70 0.0024 27.9 4.2 33 143-179 23-55 (301)
368 3trj_A Phosphoheptose isomeras 24.0 1.9E+02 0.0065 23.2 6.6 92 79-179 45-155 (201)
369 1thf_D HISF protein; thermophI 23.9 2.9E+02 0.01 22.4 10.2 51 157-207 156-218 (253)
370 2r8w_A AGR_C_1641P; APC7498, d 23.8 1E+02 0.0035 27.4 5.3 34 142-179 49-82 (332)
371 1ujp_A Tryptophan synthase alp 23.7 2E+02 0.0069 24.7 7.1 16 180-195 83-98 (271)
372 3daq_A DHDPS, dihydrodipicolin 23.5 86 0.0029 27.2 4.6 32 144-179 19-50 (292)
373 1vlv_A Otcase, ornithine carba 23.4 70 0.0024 28.7 4.1 72 154-231 103-185 (325)
374 3daq_A DHDPS, dihydrodipicolin 23.3 75 0.0026 27.5 4.2 61 156-225 88-166 (292)
375 1jr2_A Uroporphyrinogen-III sy 23.2 72 0.0025 27.0 4.0 48 161-208 205-259 (286)
376 3a5f_A Dihydrodipicolinate syn 23.1 99 0.0034 26.7 4.9 33 142-179 17-49 (291)
377 3vk5_A MOEO5; TIM barrel, tran 23.1 1.1E+02 0.0037 27.2 5.1 38 156-193 57-101 (286)
378 1f0k_A MURG, UDP-N-acetylgluco 23.0 3.3E+02 0.011 22.7 11.7 40 153-192 84-123 (364)
379 4dnh_A Uncharacterized protein 23.0 4.5E+02 0.015 24.2 9.7 88 88-192 90-187 (396)
380 3fkr_A L-2-keto-3-deoxyarabona 22.9 1.1E+02 0.0037 26.8 5.2 34 142-179 23-56 (309)
381 2a8y_A 5'-methylthioadenosine 22.9 32 0.0011 29.8 1.7 11 81-91 8-18 (270)
382 1f6k_A N-acetylneuraminate lya 22.8 79 0.0027 27.4 4.2 41 152-192 86-134 (293)
383 3lma_A Stage V sporulation pro 22.8 3.5E+02 0.012 24.4 8.7 51 144-194 48-106 (347)
384 1ml4_A Aspartate transcarbamoy 22.7 57 0.0019 29.1 3.3 71 154-230 90-173 (308)
385 1gte_A Dihydropyrimidine dehyd 22.7 2.1E+02 0.0071 29.2 7.9 55 154-208 650-730 (1025)
386 3e96_A Dihydrodipicolinate syn 22.5 49 0.0017 29.2 2.8 34 142-179 27-60 (316)
387 3eth_A Phosphoribosylaminoimid 22.4 30 0.001 31.1 1.4 22 80-107 1-22 (355)
388 2hmc_A AGR_L_411P, dihydrodipi 22.2 1E+02 0.0035 27.6 5.0 60 157-225 110-189 (344)
389 4huj_A Uncharacterized protein 22.2 57 0.002 26.5 3.1 24 72-96 15-38 (220)
390 4hwg_A UDP-N-acetylglucosamine 22.1 1.5E+02 0.0052 26.4 6.1 49 147-195 76-124 (385)
391 2ojp_A DHDPS, dihydrodipicolin 21.9 1E+02 0.0034 26.7 4.7 34 142-179 16-49 (292)
392 3h5d_A DHDPS, dihydrodipicolin 21.8 2.6E+02 0.009 24.3 7.5 37 156-192 93-138 (311)
393 3cpq_A 50S ribosomal protein L 21.8 1.4E+02 0.0048 22.0 4.9 49 156-205 28-79 (110)
394 4f2d_A L-arabinose isomerase; 21.6 1.5E+02 0.005 28.1 6.1 38 156-194 62-103 (500)
395 3eaf_A ABC transporter, substr 21.4 2.5E+02 0.0086 24.0 7.2 34 161-194 195-231 (391)
396 3sx6_A Sulfide-quinone reducta 21.3 64 0.0022 28.9 3.4 24 77-100 1-25 (437)
397 2f6u_A GGGPS, (S)-3-O-geranylg 21.1 1.1E+02 0.0037 26.1 4.6 36 158-194 26-67 (234)
398 2v9d_A YAGE; dihydrodipicolini 21.1 1.1E+02 0.0036 27.4 4.8 34 142-179 46-79 (343)
399 3sm9_A Mglur3, metabotropic gl 21.0 3.3E+02 0.011 24.6 8.3 69 165-241 116-214 (479)
400 3iwp_A Copper homeostasis prot 21.0 94 0.0032 27.6 4.3 75 159-239 53-151 (287)
401 1ydo_A HMG-COA lyase; TIM-barr 21.0 2.3E+02 0.0077 24.8 6.9 55 154-208 159-228 (307)
402 3qpm_A Peroxiredoxin; oxidored 21.0 1.7E+02 0.0059 24.1 5.9 56 150-207 96-159 (240)
403 3kws_A Putative sugar isomeras 20.9 3.1E+02 0.011 22.4 7.6 28 147-174 99-126 (287)
404 2vbi_A Pyruvate decarboxylase; 20.9 59 0.002 30.6 3.2 65 158-226 10-75 (566)
405 2iel_A Hypothetical protein TT 20.8 1E+02 0.0035 24.5 4.1 36 159-195 90-134 (138)
406 2z08_A Universal stress protei 20.8 1.4E+02 0.0047 21.5 4.7 17 159-175 93-109 (137)
407 3qfe_A Putative dihydrodipicol 20.7 90 0.0031 27.5 4.2 33 143-179 27-59 (318)
408 2qjg_A Putative aldolase MJ040 20.6 1.4E+02 0.0048 24.9 5.3 39 155-194 169-208 (273)
409 2iyf_A OLED, oleandomycin glyc 20.4 3.1E+02 0.011 23.7 7.7 40 154-195 93-132 (430)
410 1jmv_A USPA, universal stress 20.4 1.2E+02 0.0041 21.8 4.3 16 159-174 96-111 (141)
411 3ixr_A Bacterioferritin comigr 20.4 1.8E+02 0.0061 22.4 5.5 43 151-193 71-114 (179)
412 1cb0_A Protein (5'-deoxy-5'-me 20.4 40 0.0014 29.1 1.8 13 81-93 10-22 (283)
413 3hkx_A Amidase; alpha-beta-BET 20.4 1.1E+02 0.0038 25.9 4.6 33 145-177 33-65 (283)
414 3cpr_A Dihydrodipicolinate syn 20.4 1.2E+02 0.004 26.5 4.8 34 142-179 31-64 (304)
415 2gl5_A Putative dehydratase pr 20.3 1.6E+02 0.0055 26.3 5.9 37 157-193 237-274 (410)
416 3h6g_A Glutamate receptor, ion 20.3 3.3E+02 0.011 23.2 7.8 34 160-193 66-100 (395)
417 1w8s_A FBP aldolase, fructose- 20.3 3.9E+02 0.013 22.5 8.4 65 156-230 163-238 (263)
418 1ybh_A Acetolactate synthase, 20.3 98 0.0034 29.2 4.6 73 158-233 19-92 (590)
419 3auf_A Glycinamide ribonucleot 20.2 2.2E+02 0.0074 23.9 6.4 37 158-194 40-78 (229)
420 1prx_A HORF6; peroxiredoxin, h 20.1 1.9E+02 0.0064 23.6 5.9 43 151-193 51-104 (224)
421 3d0c_A Dihydrodipicolinate syn 20.1 1.1E+02 0.0036 27.0 4.5 34 142-179 27-60 (314)
422 1kjq_A GART 2, phosphoribosylg 20.0 3.6E+02 0.012 23.2 8.0 12 79-91 10-21 (391)
No 1
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=100.00 E-value=1e-36 Score=266.93 Aligned_cols=139 Identities=23% Similarity=0.406 Sum_probs=121.4
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC----CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE----NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d----~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
||+|||||||||+||++||++|++.++++ ++++++++|.+ +++ ....+ ..++|+++.+++.
T Consensus 2 mk~iGilGGmg~~at~~~~~~i~~~~~~~~~~~h~~~~~~~s~~-~~~-----------~~~~~---~~~~~~~~~~~l~ 66 (231)
T 3ojc_A 2 MKILGLIGGMSWESTIPYYRMINQHVKAQLGGLHSAKIILYSVD-FHE-----------IEQLQ---AKGDWQTAAQLLS 66 (231)
T ss_dssp CCCEEEEECTTHHHHHHHHHHHHHHHHHHHCTTCCCCEEEEECC-HHH-----------HHHHH---HTTCHHHHHHHHH
T ss_pred CCeEEEEccCCHHHHHHHHHHHHHHhHHhcCCCCCccceeeCCC-hhh-----------HHHHH---HCCChhHHHHHHH
Confidence 89999999999999999999999999963 44678888843 222 11111 3568999999999
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHHHH
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEK 235 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~~~ 235 (241)
+.+++|+++|||+|||||||+|++++++++.+++||+||++++++++++.+.+ |||||||++|+++++|++.
T Consensus 67 ~~~~~L~~~g~~~iviaCNTa~~~~~~l~~~~~iPvi~i~~~~~~~a~~~~~~--------rVgvLaT~~T~~s~~y~~~ 138 (231)
T 3ojc_A 67 NAAISLKHAGAEVIVVCTNTMHKVADDIEAACGLPLLHIADATAVQIKQQGID--------KIGLLGTRYTMEQGFYRGR 138 (231)
T ss_dssp HHHHHHHHHTCCEEEECSSGGGGGHHHHHHHHCSCBCCHHHHHHHHHHHTTCC--------EEEEESCHHHHHSTTTHHH
T ss_pred HHHHHHHhcCCCEEEEeCCchHHHHHHHHHhCCCCEeccHHHHHHHHHHcCCC--------EEEEEcCHHHhhchHHHHH
Confidence 99999999999999999999999999999999999999999999999886544 9999999999999999999
Q ss_pred HHhc-CC
Q 026201 236 LQHE-DC 241 (241)
Q Consensus 236 L~~~-G~ 241 (241)
|++. |+
T Consensus 139 l~~~~g~ 145 (231)
T 3ojc_A 139 LTEKHGI 145 (231)
T ss_dssp HHHTTCC
T ss_pred HHhcCCC
Confidence 9987 74
No 2
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=100.00 E-value=1.4e-34 Score=259.10 Aligned_cols=135 Identities=31% Similarity=0.562 Sum_probs=118.4
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchH---HhhhcCCChhhhhcccCCCCCCCHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNK---ELLSHDRSSFSSLNCKGGGVQLDDSLIVEN 153 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d---~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~ 153 (241)
||+|||||||||+||++|||+|++.+++. +|+|++++|+|++++ ++..++.++ .+.
T Consensus 26 ~k~IGiiGGmg~~aT~~~~~~i~~~~~~~~D~~h~p~~~~s~~~i~~r~~~~~~~g~~~------------------~~~ 87 (268)
T 3s81_A 26 KHTIGILGGMGPAATADMLEKFVELRHASCDQQHIPLIVSSIPDIPDRTACLLSGGPSP------------------YRY 87 (268)
T ss_dssp CCCEEEECCSSHHHHHHHHHHHHHHSCCSSGGGSCCEEEEECTTSCCHHHHHHHCCCCS------------------HHH
T ss_pred CCcEEEEecCCHHHHHHHHHHHHHhhHhhcCCCCCCEEEeccCCHHHHHHHHHhCCchH------------------HHH
Confidence 89999999999999999999999999964 899999999999875 344443333 334
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQ 233 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~ 233 (241)
+.+.+++|+++|||+|||||||+|++++++++.+++|||||+++++++++ .+ .+|||||||++|+++++|+
T Consensus 88 l~~~~~~L~~~Gad~IVIaCNTah~~l~~lr~~~~iPvigiiea~~~aa~-~~--------~~rVgVLaT~~T~~s~~y~ 158 (268)
T 3s81_A 88 LERYLHMLEDAGAECIVIPCNTAHYWFDDLQNVAKARMISILDATLGDIP-PS--------ARHVGLLATNATLATGLYQ 158 (268)
T ss_dssp HHHHHHHHHHTTCSEEECSCSGGGGGHHHHHHHCSSEEECHHHHHHHTSC-TT--------CCEEEEECCHHHHHTTTTH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHCCCCEEcccHHHHHHHH-hc--------CCcEEEEechHHhhHHHHH
Confidence 67788999999999999999999999999999999999999999998776 33 3499999999999999999
Q ss_pred HHHHhcCC
Q 026201 234 EKLQHEDC 241 (241)
Q Consensus 234 ~~L~~~G~ 241 (241)
+.|++.|+
T Consensus 159 ~~l~~~g~ 166 (268)
T 3s81_A 159 KKALARGL 166 (268)
T ss_dssp HHHHHHTC
T ss_pred HHHHHcCC
Confidence 99998874
No 3
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=100.00 E-value=7e-34 Score=246.41 Aligned_cols=139 Identities=23% Similarity=0.400 Sum_probs=121.3
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRR 156 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~ 156 (241)
||+|||||||||+||++||++|++.+++. +|++++++|+|+++++..- + ..+|+...+.+.+
T Consensus 1 m~~iGiiGGmg~~at~~~~~~i~~~~~~~~d~~~~~~~~~~~~~i~~r~~~-----------~----~~~~~~~~~~l~~ 65 (228)
T 1jfl_A 1 MKTIGILGGMGPLATAELFRRIVIKTPAKRDQEHPKVIIFNNPQIPDRTAY-----------I----LGKGEDPRPQLIW 65 (228)
T ss_dssp CCCEEEEECSSHHHHHHHHHHHHHTCCCSSGGGSCCEEEEECTTSCCHHHH-----------H----TTSSCCCHHHHHH
T ss_pred CCeEEEecccCHHHHHHHHHHHHHHHHhhcCCccCcEeEEeCCCHHHHHHH-----------H----HcCCchHHHHHHH
Confidence 78999999999999999999999999854 8999999999988764210 0 0135556677888
Q ss_pred HHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHHHHH
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL 236 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~~~L 236 (241)
.+++|++.|||+|||||||+|.+++++++.+++|++||++++++.+.+.+.+ |||||||++|+++++|++.|
T Consensus 66 ~~~~l~~~g~d~iviaCnTa~~~~~~l~~~~~iPvi~i~~~~~~~a~~~~~~--------rigvlaT~~T~~~~~y~~~l 137 (228)
T 1jfl_A 66 TAKRLEECGADFIIMPCNTAHAFVEDIRKAIKIPIISMIEETAKKVKELGFK--------KAGLLATTGTIVSGVYEKEF 137 (228)
T ss_dssp HHHHHHHHTCSEEECSCTGGGGGHHHHHHHCSSCBCCHHHHHHHHHHHTTCS--------EEEEECCHHHHHHTHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCccHHHHHHHHHHhCCCCEechHHHHHHHHHHcCCC--------eEEEEecHHHhhhhHHHHHH
Confidence 8999999999999999999999999999999999999999999998775433 99999999999999999999
Q ss_pred HhcCC
Q 026201 237 QHEDC 241 (241)
Q Consensus 237 ~~~G~ 241 (241)
++.|+
T Consensus 138 ~~~g~ 142 (228)
T 1jfl_A 138 SKYGV 142 (228)
T ss_dssp HHTTC
T ss_pred HHCCC
Confidence 98874
No 4
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.2e-33 Score=244.84 Aligned_cols=138 Identities=25% Similarity=0.377 Sum_probs=119.5
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhcc--C-CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGE--E-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRR 156 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~--d-~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~ 156 (241)
||+|||||||||+||++||++|++.+++ + +|.+.++.+.+.+++. .. ...+|+.+.+.+.+
T Consensus 1 m~~iGiiGGmgp~at~~~~~~i~~~~~~~~~~~~~~~i~~~~~~~~~~-~~---------------~~~~~~~~~~~l~~ 64 (226)
T 2zsk_A 1 MKKIGIIGGTTPESTLYYYKKYIEISREKFEKYFYPELIIYSINFKEF-FQ---------------NPEGWEGRKKILIN 64 (226)
T ss_dssp CCCEEEEECSSHHHHHHHHHHHHHHHHHHSSTTCCCCEEEEECCTHHH-HT---------------CTTHHHHHHHHHHH
T ss_pred CCeEEEecccCHHHHHHHHHHHHHHHHHhcCCccCCeeEEeCCCHHHH-Hh---------------hcCCcchHHHHHHH
Confidence 6899999999999999999999999985 3 6665555555666654 11 12348999999999
Q ss_pred HHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHHHHH
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL 236 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~~~L 236 (241)
.+++|++.|||+|||||||+|.+++++++.+++|++||++++++++++.+.+ |||||||++|+++++|++.+
T Consensus 65 ~~~~L~~~g~d~iviaCnTa~~~~~~l~~~~~iPvi~i~~a~~~~~~~~~~~--------rigvlaT~~T~~~~~y~~~l 136 (226)
T 2zsk_A 65 AAKALERAGAELIAFAANTPHLVFDDVQREVNVPMVSIIDAVAEEILKRGVR--------KVLLLGTKTTMTADFYIKTL 136 (226)
T ss_dssp HHHHHHHHTCSEEEESSSGGGGGHHHHHHHCSSCBCCHHHHHHHHHHHTTCC--------EEEEESSTTTTSCHHHHHHH
T ss_pred HHHHHHHcCCCEEEECCCcHHHHHHHHHHhCCCCEeccHHHHHHHHHHcCCC--------eEEEEeCHHHHhhhHHHHHH
Confidence 9999999999999999999999999999999999999999999999775443 99999999999999999999
Q ss_pred HhcCC
Q 026201 237 QHEDC 241 (241)
Q Consensus 237 ~~~G~ 241 (241)
++.|+
T Consensus 137 ~~~g~ 141 (226)
T 2zsk_A 137 EEKGL 141 (226)
T ss_dssp HTTTC
T ss_pred HHCCC
Confidence 98875
No 5
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=99.89 E-value=7.1e-23 Score=182.68 Aligned_cols=135 Identities=18% Similarity=0.235 Sum_probs=110.2
Q ss_pred chhhccCCeEEEE-eCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHH
Q 026201 74 DALLNQANTVGIV-GGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVE 152 (241)
Q Consensus 74 ~~~~~~~k~IGII-GGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~ 152 (241)
+++|+..++|||+ ||||+ +.++++|.+..+.. .++-+.|... .|+ ...+++.+.+
T Consensus 6 ~~~~~~~~~IGv~DsG~Gg---ltv~~~i~~~~P~~---~~iy~~D~~~-----------~Py-------g~~s~~~i~~ 61 (273)
T 2oho_A 6 GSHMMDTRPIGFLDSGVGG---LTVVCELIRQLPHE---KIVYIGDSAR-----------APY-------GPRPKKQIKE 61 (273)
T ss_dssp SSCBCCCCCEEEEESSSTT---HHHHHHHHHHCTTC---CEEEEECGGG-----------CCC-------TTSCHHHHHH
T ss_pred cccccCCCcEEEEeCCCcH---HHHHHHHHHHCCCC---CEEEEeCCCC-----------CCC-------CCCCHHHHHH
Confidence 3455334689999 99998 47999999999876 2444454421 111 3456788999
Q ss_pred HHHHHHHHHHHhCCcEEEEeCCchhhh-HHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhh
Q 026201 153 NLRRKRVFLEKAGARCIVMPCHLSHIW-HDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGF 231 (241)
Q Consensus 153 ~l~~~~~~Le~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~ 231 (241)
.+.+.+++|++.|||+|||||||+|.+ ++++++.+++||++|++++++.+.+.. +++|||||||++|+++++
T Consensus 62 ~~~~~~~~L~~~g~d~iviaCNTas~~~l~~lr~~~~iPvigi~epa~~~A~~~~-------~~~rIgVlaT~~T~~~~~ 134 (273)
T 2oho_A 62 YTWELVNFLLTQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKST-------TKGQVGVIGTPMTVASDI 134 (273)
T ss_dssp HHHHHHHHHHTTTCSEEEECCHHHHHHHHHHHHHHCSSCEEESHHHHHHHHHHHC-------SSSEEEEEECHHHHHHTH
T ss_pred HHHHHHHHHHHCCCCEEEEeCchHhHHHHHHHHHhCCCCEEeccHHHHHHHHHhc-------CCCeEEEEECchhhcchH
Confidence 999999999999999999999999965 799999999999999999998877641 244999999999999999
Q ss_pred HHHHHHhc
Q 026201 232 YQEKLQHE 239 (241)
Q Consensus 232 Y~~~L~~~ 239 (241)
|++.+++.
T Consensus 135 y~~~l~~~ 142 (273)
T 2oho_A 135 YRKKIQLL 142 (273)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999887
No 6
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=99.89 E-value=8e-23 Score=184.20 Aligned_cols=137 Identities=15% Similarity=0.233 Sum_probs=111.3
Q ss_pred cchhhccCCeEEEE-eCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHH
Q 026201 73 SDALLNQANTVGIV-GGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIV 151 (241)
Q Consensus 73 ~~~~~~~~k~IGII-GGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~ 151 (241)
++++|+..++|||+ ||||+ +.+|++|++..+.+ .++-+.|.. ..|+ ...+|+++.
T Consensus 17 ~~~~~~~~~~IGvfDsG~Gg---ltv~~~i~~~~P~~---~~iy~~D~~-----------~~py-------G~~s~~~i~ 72 (290)
T 2vvt_A 17 RGSHMSNQEAIGLIDSGVGG---LTVLKEALKQLPNE---RLIYLGDTA-----------RCPY-------GPRPAEQVV 72 (290)
T ss_dssp TSSCCGGGSCEEEEESSSTT---HHHHHHHHHHCTTS---CEEEEECTT-----------TCCC-------TTSCHHHHH
T ss_pred CCccccCCCcEEEEeCCCcH---HHHHHHHHHHCCCc---cEEEecccc-----------cCCC-------CCCCHHHHH
Confidence 55666445689999 99998 47999999999876 122222221 1111 356789999
Q ss_pred HHHHHHHHHHHHhCCcEEEEeCCchhh-hHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhh
Q 026201 152 ENLRRKRVFLEKAGARCIVMPCHLSHI-WHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAG 230 (241)
Q Consensus 152 ~~l~~~~~~Le~~Gad~IvIaCNTAH~-~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~ 230 (241)
+++.+.+++|++.|||+|||||||+|. +++++++.+++||++|++++++.+.+.. .++|||||||++|++++
T Consensus 73 ~~~~~~~~~L~~~g~d~IVIACNTas~~~l~~lr~~~~iPVigiiepa~~~A~~~~-------~~~rIgVLaT~~T~~s~ 145 (290)
T 2vvt_A 73 QFTWEMADFLLKKRIKMLVIACNTATAVALEEIKAALPIPVVGVILPGARAAVKVT-------KNNKIGVIGTLGTIKSA 145 (290)
T ss_dssp HHHHHHHHHHHTTTCSEEEECCHHHHHHHHHHHHHHCSSCEEESSHHHHHHHHHHC-------SSSEEEEEECHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCEEEEeCcchhHHHHHHHHHhCCCCEEcccHHHHHHHHHhc-------CCCEEEEEeCcHhhhhH
Confidence 999999999999999999999999995 5899999999999999999999887531 24599999999999999
Q ss_pred hHHHHHHhcC
Q 026201 231 FYQEKLQHED 240 (241)
Q Consensus 231 ~Y~~~L~~~G 240 (241)
+|++.+++.|
T Consensus 146 ~y~~~l~~~~ 155 (290)
T 2vvt_A 146 SYEIAIKSKA 155 (290)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHHhC
Confidence 9999998864
No 7
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=99.88 E-value=3.2e-22 Score=179.91 Aligned_cols=139 Identities=16% Similarity=0.207 Sum_probs=110.9
Q ss_pred cchhhc-cCCeEEEEe-CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHH
Q 026201 73 SDALLN-QANTVGIVG-GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLI 150 (241)
Q Consensus 73 ~~~~~~-~~k~IGIIG-GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i 150 (241)
-+.+|+ ....|||+. |+|.+ ..++.|.+..+.. +++-+.|.. .+|+ .+.+|+++
T Consensus 16 ~~~~~~~~~~~IgvfDSGvGGL---tv~~~i~~~lP~e---~~iy~~D~a-----------~~PY-------G~ks~e~i 71 (274)
T 3uhf_A 16 ENLYFQSNAMKIGVFDSGVGGL---SVLKSLYEARLFD---EIIYYGDTA-----------RVPY-------GVKDKDTI 71 (274)
T ss_dssp -CCCCCCSCCEEEEEESSSTTH---HHHHHHHHTTCCS---EEEEEECTT-----------TCCC-------TTSCHHHH
T ss_pred ceeeccCCCCeEEEEECCCChH---HHHHHHHHHCCCC---CEEEEecCC-----------CCCC-------CCCCHHHH
Confidence 345553 345899999 99999 5667777777654 333333221 2222 57899999
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeCCchhhh-HHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhh
Q 026201 151 VENLRRKRVFLEKAGARCIVMPCHLSHIW-HDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTA 229 (241)
Q Consensus 151 ~~~l~~~~~~Le~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s 229 (241)
.+++.+++++|+++|||+|||||||+|.+ ++++++.+++|||+|+|++++.+.+... ++++|||||||++|+++
T Consensus 72 ~~~~~~~~~~L~~~g~d~IVIACNTa~~~al~~lr~~~~iPvigiiepa~~~a~~~~~-----t~~~~IGVLaT~~Ti~s 146 (274)
T 3uhf_A 72 IKFCLEALDFFEQFQIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALH-----DKNKEILVIATKATIKS 146 (274)
T ss_dssp HHHHHHHHHHHTTSCCSEEEECCHHHHHHSHHHHHHHCSSCEECSHHHHHHHHHHHHC-----CTTSCEEEEECHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEEEeCCChhHHHHHHHHHhcCCCEEcCCHHHHHHHHHhcc-----cCCCeEEEEeccccccH
Confidence 99999999999999999999999999987 7999999999999999999999887510 12449999999999999
Q ss_pred hhHHHHHHhcC
Q 026201 230 GFYQEKLQHED 240 (241)
Q Consensus 230 ~~Y~~~L~~~G 240 (241)
++|++.|++.|
T Consensus 147 ~~Y~~~l~~~~ 157 (274)
T 3uhf_A 147 EEYQKRLLSQG 157 (274)
T ss_dssp THHHHHHHTTT
T ss_pred HHHHHHHHHcC
Confidence 99999998765
No 8
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=99.87 E-value=1.2e-21 Score=176.21 Aligned_cols=133 Identities=12% Similarity=0.141 Sum_probs=107.0
Q ss_pred chhhccCCeEEEE-eCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHH
Q 026201 74 DALLNQANTVGIV-GGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVE 152 (241)
Q Consensus 74 ~~~~~~~k~IGII-GGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~ 152 (241)
..+| .++|||+ +||| ++.++++|.+..+.+ .++-+.|.. ..|+ ...+++++.+
T Consensus 18 ~~~m--~~~IGvfDsG~G---gltv~~~i~~~~P~~---~~iy~~D~~-----------~~Py-------g~~s~~~i~~ 71 (286)
T 2jfq_A 18 GSHM--NKPIGVIDSGVG---GLTVAKEIMRQLPNE---TIYYLGDIG-----------RCPY-------GPRPGEQVKQ 71 (286)
T ss_dssp ---C--CSCEEEEESSST---THHHHHHHHHHCTTC---CEEEEECTT-----------TCCC-------TTSCHHHHHH
T ss_pred cccc--CCcEEEEeCCCC---cHHHHHHHHHHCCCc---cEEEeccCC-----------CCCc-------CCCCHHHHHH
Confidence 3455 2589999 9999 779999999998876 222222221 1111 3567889999
Q ss_pred HHHHHHHHHHHhCCcEEEEeCCchhh-hHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhh
Q 026201 153 NLRRKRVFLEKAGARCIVMPCHLSHI-WHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGF 231 (241)
Q Consensus 153 ~l~~~~~~Le~~Gad~IvIaCNTAH~-~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~ 231 (241)
++.+.+++|++.|||+|||||||+|. +++++++.+++||++|++++++.+.+.. .++|||||||++|+++++
T Consensus 72 ~~~~~~~~L~~~g~d~IVIaCNTas~~~l~~lr~~~~iPVigi~e~a~~~A~~~~-------~~~rIgVLaT~~T~~~~~ 144 (286)
T 2jfq_A 72 YTVEIARKLMEFDIKMLVIACNTATAVALEYLQKTLSISVIGVIEPGARTAIMTT-------RNQNVLVLGTEGTIKSEA 144 (286)
T ss_dssp HHHHHHHHHTTSCCSEEEECCHHHHHHHHHHHHHHCSSEEEESHHHHHHHHHHHC-------SSSEEEEEECHHHHHHTH
T ss_pred HHHHHHHHHHHCCCCEEEEeCCchhHHHHHHHHHhCCCCEEeccHHHHHHHHHhc-------CCCEEEEEeChHHhcchH
Confidence 99999999999999999999999996 6899999999999999999998877631 244999999999999999
Q ss_pred HHHHHHhc
Q 026201 232 YQEKLQHE 239 (241)
Q Consensus 232 Y~~~L~~~ 239 (241)
|++.+++.
T Consensus 145 y~~~l~~~ 152 (286)
T 2jfq_A 145 YRTHIKRI 152 (286)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999876
No 9
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=99.86 E-value=1.5e-21 Score=174.67 Aligned_cols=130 Identities=15% Similarity=0.232 Sum_probs=105.4
Q ss_pred hccCCeEEEEe-CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 77 LNQANTVGIVG-GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 77 ~~~~k~IGIIG-GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
|+..+.|||+. |+|.+ ..++.|.+..+.. +++-+.|.. .+|+ ...+|+++.+++.
T Consensus 4 ~~~~~pIgvfDSGvGGL---tv~~~i~~~lp~~---~~iy~~D~a-----------~~PY-------G~~~~~~i~~~~~ 59 (268)
T 3out_A 4 MLDNRPIGVFDSGIGGL---TIVKNLMSILPNE---DIIYFGDIA-----------RIPY-------GTKSRATIQKFAA 59 (268)
T ss_dssp -CTTSCEEEEESSSTTH---HHHHHHHHHCTTC---CEEEEECTT-----------TCCC-------TTSCHHHHHHHHH
T ss_pred cCCCCcEEEEECCCChH---HHHHHHHHHCCCC---cEEEecCCC-----------CCCC-------CCCCHHHHHHHHH
Confidence 54566899999 99999 4556666666654 344434321 1222 5789999999999
Q ss_pred HHHHHHHHhCCcEEEEeCCchhh-hHHHHhccC-CCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHH
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHI-WHDEVCKGC-SVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQ 233 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~-~~d~l~~~~-~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~ 233 (241)
+.+++|+++|||+|||||||+|. +++++++.+ ++|||||++++++. .. .++|||||||++|+++++|+
T Consensus 60 ~~~~~L~~~g~~~iVIACNTa~~~al~~lr~~~~~iPvigiiep~~~~--~~--------~~~~IGVLaT~~Ti~s~~y~ 129 (268)
T 3out_A 60 QTAKFLIDQEVKAIIIACNTISAIAKDIVQEIAKAIPVIDVITAGVSL--VD--------NLNTVGVIATPATINSNAYA 129 (268)
T ss_dssp HHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHHTTSCEEEHHHHHHHT--TT--------TCSEEEEEECHHHHHHTHHH
T ss_pred HHHHHHHHCCCCEEEEeCCChHHHHHHHHHHhcCCCCEEeccHHHHHH--hc--------cCCeEEEEecCcccccHHHH
Confidence 99999999999999999999998 569999999 99999999999987 22 34599999999999999999
Q ss_pred HHHHhcC
Q 026201 234 EKLQHED 240 (241)
Q Consensus 234 ~~L~~~G 240 (241)
+.+++.|
T Consensus 130 ~~l~~~~ 136 (268)
T 3out_A 130 LQIHKKN 136 (268)
T ss_dssp HHHHHHC
T ss_pred HHHHHhC
Confidence 9998875
No 10
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=99.86 E-value=7.5e-21 Score=170.28 Aligned_cols=130 Identities=15% Similarity=0.210 Sum_probs=105.9
Q ss_pred CCeEEEEe-CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 80 ANTVGIVG-GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 80 ~k~IGIIG-GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
.+.|||+. |+|.+ -.++.|.+..+.. +++-+-|.. .+|+ .+...+++.+++.+.+
T Consensus 5 ~~~IgvfDSGvGGl---tv~~~i~~~lP~~---~~iy~~D~a-----------~~PY-------G~ks~~~i~~~~~~~~ 60 (269)
T 3ist_A 5 KQAIGFIDSGVGGL---TVVREVLKQLPHE---QVYYLGDTA-----------RCPY-------GPRDKEEVAKFTWEMT 60 (269)
T ss_dssp CCCEEEEESSSTTH---HHHHHHHHHCTTC---CEEEEECGG-----------GCCC-------TTSCHHHHHHHHHHHH
T ss_pred CCcEEEEECCccHH---HHHHHHHHHCCCC---cEEEEeCCC-----------CCCC-------CCCCHHHHHHHHHHHH
Confidence 45799999 99999 6778888877765 333333221 1222 5667889999999999
Q ss_pred HHHHHhCCcEEEEeCCchhhh-HHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHHHHHH
Q 026201 159 VFLEKAGARCIVMPCHLSHIW-HDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQ 237 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~~~L~ 237 (241)
++|+++|||+|||||||+|++ ++++++.+++|||||++++++.+.+.. +++|||||||++|+++++|++.++
T Consensus 61 ~~L~~~g~~~IVIACNTa~~~al~~lr~~~~iPvigii~pa~~~A~~~~-------~~~~IGVLaT~~Ti~s~~y~~~i~ 133 (269)
T 3ist_A 61 NFLVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAALKAT-------RNNKIGVLGTLGTVESMAYPTALK 133 (269)
T ss_dssp HHHHHTTCSEEEECCHHHHHHHHHHHHHHCSSCEEESHHHHHHHHHHHC-------SSSEEEEEECHHHHHHTHHHHHHH
T ss_pred HHHHHCCCCEEEEeCCCccHHHHHHHHHhcCCCEEeecHHHHHHHHHHc-------CCCeEEEEeccchhhHHHHHHHHH
Confidence 999999999999999999995 899999999999999998888655431 245999999999999999999998
Q ss_pred hcC
Q 026201 238 HED 240 (241)
Q Consensus 238 ~~G 240 (241)
+.|
T Consensus 134 ~~~ 136 (269)
T 3ist_A 134 GLN 136 (269)
T ss_dssp HHC
T ss_pred HhC
Confidence 865
No 11
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=99.83 E-value=5.2e-20 Score=163.66 Aligned_cols=128 Identities=13% Similarity=0.224 Sum_probs=105.9
Q ss_pred CeEEEEe-CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 81 NTVGIVG-GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 81 k~IGIIG-GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
+.|||+. |+|.+ .++++|.+..+.. .++-+.|.. ..|+ ...+++++.+++.+.++
T Consensus 4 ~~IgvfDSGvGGl---tv~~~i~~~lP~~---~~iy~~D~~-----------~~Py-------g~~s~~~i~~~~~~~~~ 59 (267)
T 2gzm_A 4 RAIGVIDSGVGGL---TVAKELIRQLPKE---RIIYLGDTA-----------RCPY-------GPRSREEVRQFTWEMTE 59 (267)
T ss_dssp SCEEEEESSSTTH---HHHHHHHHHCTTS---CEEEEECTT-----------TCCC-------TTSCHHHHHHHHHHHHH
T ss_pred CcEEEEeCCccHH---HHHHHHHHHCCCC---CEEEecCCC-----------CCCC-------CCCCHHHHHHHHHHHHH
Confidence 3799996 99987 7889999998865 223223221 1111 35678899999999999
Q ss_pred HHHHhCCcEEEEeCCchhh-hHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHHHHHHh
Q 026201 160 FLEKAGARCIVMPCHLSHI-WHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQH 238 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~-~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~~~L~~ 238 (241)
+|++.|||+|||||||+|. +++++++.+++||++|++++++.+.+.. +++|||||||++|+++++|++.+++
T Consensus 60 ~L~~~g~d~iviaCNTas~~~l~~lr~~~~iPvigi~ep~~~~A~~~~-------~~~rIgVlaT~~T~~~~~y~~~l~~ 132 (267)
T 2gzm_A 60 HLLDLNIKMLVIACNTATAVVLEEMQKQLPIPVVGVIHPGSRTALKVT-------NTYHVGIIGTIGTVKSGAYEEALKS 132 (267)
T ss_dssp HHHTTTCSEEEECCHHHHHHHHHHHHHHCSSCEEESHHHHHHHHHHHC-------SSCEEEEEECHHHHHHTHHHHHHHH
T ss_pred HHHHCCCCEEEEeCchhhHHHHHHHHHhCCCCEEeecHHHHHHHHHcc-------CCCEEEEEEChHHhccHHHHHHHHH
Confidence 9999999999999999996 7899999999999999999999887641 2449999999999999999999998
Q ss_pred c
Q 026201 239 E 239 (241)
Q Consensus 239 ~ 239 (241)
.
T Consensus 133 ~ 133 (267)
T 2gzm_A 133 I 133 (267)
T ss_dssp H
T ss_pred h
Confidence 7
No 12
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=99.83 E-value=6.1e-20 Score=163.89 Aligned_cols=128 Identities=13% Similarity=0.243 Sum_probs=105.7
Q ss_pred CeEEEEe-CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 81 NTVGIVG-GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 81 k~IGIIG-GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
+.|||+. |+|.+ .++++|.+..+.. .++-+.|.. ..|+ ...+++++.+++.+.++
T Consensus 4 ~~IgvfDSGvGGl---tv~~~i~~~lP~~---~~iy~~D~~-----------~~Py-------G~~s~~~i~~~~~~~~~ 59 (272)
T 1zuw_A 4 QPIGVIDSGVGGL---TVAKEIMRQLPKE---NIIYVGDTK-----------RCPY-------GPRPEEEVLQYTWELTN 59 (272)
T ss_dssp SCEEEEESSSTTH---HHHHHHHHHSTTC---CEEEEECGG-----------GCCC-------SSSCHHHHHHHHHHHHH
T ss_pred CeEEEEeCCcchH---HHHHHHHHhCCCC---cEEEeccCC-----------CCCC-------CCCCHHHHHHHHHHHHH
Confidence 4799995 99976 7899999998876 233333322 1111 45678899999999999
Q ss_pred HHHH-hCCcEEEEeCCchhh-hHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHHHHHH
Q 026201 160 FLEK-AGARCIVMPCHLSHI-WHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQ 237 (241)
Q Consensus 160 ~Le~-~Gad~IvIaCNTAH~-~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~~~L~ 237 (241)
+|++ .|||+|||||||+|. +++++++.+++||++|++++++.+.+.. .++|||||||++|+++++|++.++
T Consensus 60 ~L~~~~g~d~iViACNTas~~~l~~lr~~~~iPVigiiepa~~~A~~~~-------~~~rIgVlaT~~T~~s~~y~~~i~ 132 (272)
T 1zuw_A 60 YLLENHHIKMLVIACNTATAIALDDIQRSVGIPVVGVIQPGARAAIKVT-------DNQHIGVIGTENTIKSNAYEEALL 132 (272)
T ss_dssp HHHHHSCCSEEEECCHHHHHHHHHHHHHHCSSCEEESHHHHHHHHHHHC-------SSSEEEEEECHHHHHTTHHHHHHH
T ss_pred HHHhhcCCCEEEEeCchhhHHHHHHHHHHCCCCEEcccHHHHHHHHHhc-------CCCEEEEEEChhhhhhhHHHHHHH
Confidence 9999 999999999999997 6899999999999999999998877631 245999999999999999999998
Q ss_pred hc
Q 026201 238 HE 239 (241)
Q Consensus 238 ~~ 239 (241)
+.
T Consensus 133 ~~ 134 (272)
T 1zuw_A 133 AL 134 (272)
T ss_dssp HH
T ss_pred Hh
Confidence 76
No 13
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=99.82 E-value=9.9e-20 Score=160.46 Aligned_cols=129 Identities=22% Similarity=0.270 Sum_probs=105.7
Q ss_pred eEEEEe-CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHH
Q 026201 82 TVGIVG-GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVF 160 (241)
Q Consensus 82 ~IGIIG-GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~ 160 (241)
+|||+. |+|.. .++++|.+..+.. .++-+.|.. ..|+ ...+++.+.+.+.+.+++
T Consensus 2 ~IgvfDSG~Ggl---tv~~~l~~~~P~~---~~iy~~D~~-----------~~py-------G~~s~~~i~~~~~~~~~~ 57 (254)
T 1b73_A 2 KIGIFDSGVGGL---TVLKAIRNRYRKV---DIVYLGDTA-----------RVPY-------GIRSKDTIIRYSLECAGF 57 (254)
T ss_dssp EEEEEESSSGGG---THHHHHHHHSTTC---EEEEEECTT-----------TCCC-------TTSCHHHHHHHHHHHHHH
T ss_pred cEEEEECCccHH---HHHHHHHHhCCCC---cEEEeecCC-----------CCCC-------CcCCHHHHHHHHHHHHHH
Confidence 699996 99977 7999999998865 233223332 1111 355788899999999999
Q ss_pred HHHhCCcEEEEeCCchhh-hHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHHHHHHhc
Q 026201 161 LEKAGARCIVMPCHLSHI-WHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE 239 (241)
Q Consensus 161 Le~~Gad~IvIaCNTAH~-~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~~~L~~~ 239 (241)
|++.|||+|||||||+|. +++++++.+++|+++|++++++.+.+.. .++|||||||++|+++++|++.+++.
T Consensus 58 L~~~g~d~iviaCnTa~~~~~~~lr~~~~iPvigi~e~~~~~A~~~~-------~~~rigVlaT~~T~~~~~y~~~l~~~ 130 (254)
T 1b73_A 58 LKDKGVDIIVVACNTASAYALERLKKEINVPVFGVIEPGVKEALKKS-------RNKKIGVIGTPATVKSGAYQRKLEEG 130 (254)
T ss_dssp HHTTTCSEEEECCHHHHTTSHHHHHHHSSSCEEESHHHHHHHHHHHC-------SSCEEEEEECHHHHHHCHHHHHHHTT
T ss_pred HHHCCCCEEEEeCchhhHHHHHHHHHhCCCCEEeeeHHHHHHHHHcc-------CCCEEEEEEChHHhhhHHHHHHHHcC
Confidence 999999999999999994 7999999999999999999999877641 23499999999999999999999876
Q ss_pred CC
Q 026201 240 DC 241 (241)
Q Consensus 240 G~ 241 (241)
|+
T Consensus 131 g~ 132 (254)
T 1b73_A 131 GA 132 (254)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 14
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=99.81 E-value=1.6e-19 Score=161.31 Aligned_cols=129 Identities=14% Similarity=0.202 Sum_probs=106.3
Q ss_pred CeEEEEe-CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 81 NTVGIVG-GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 81 k~IGIIG-GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
+.|||+. |+|.+ .++++|.+..+.+ .++-+.|... .|+ ...+++++.+++.+.++
T Consensus 8 ~~IgvfDSGvGGl---tv~~~i~~~lP~~---~~iy~~D~~~-----------~Py-------G~~s~~~i~~~~~~~~~ 63 (276)
T 2dwu_A 8 SVIGVLDSGVGGL---TVASEIIRQLPKE---SICYIGDNER-----------CPY-------GPRSVEEVQSFVFEMVE 63 (276)
T ss_dssp CEEEEEESSSTTH---HHHHHHHHHCTTS---CEEEEECGGG-----------CCC-------TTSCHHHHHHHHHHHHH
T ss_pred CeEEEEeCCcchH---HHHHHHHHhCCCC---cEEEccCCCC-----------CCC-------CCCCHHHHHHHHHHHHH
Confidence 4899995 99977 7889999998876 2333343321 111 45678999999999999
Q ss_pred HHHHhCCcEEEEeCCchhh-hHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHHHHHHh
Q 026201 160 FLEKAGARCIVMPCHLSHI-WHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQH 238 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~-~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~~~L~~ 238 (241)
+|++.|||+|||||||+|. +++++++.+++||++|++++++.+.+.. .++|||||||++|+++++|++.+++
T Consensus 64 ~L~~~g~d~IViACNTas~~~l~~lr~~~~iPVigiiep~~~~A~~~~-------~~~rIgVlaT~~T~~s~~y~~~i~~ 136 (276)
T 2dwu_A 64 FLKQFPLKALVVACNTAAAATLAALQEALSIPVIGVIHPGARAAIKVT-------KKGKIGVIGTVGTIQSNMYEKALHE 136 (276)
T ss_dssp HHTTSCEEEEEECCHHHHHHHHHHHHHHCSSCEEESHHHHHHHHHHHC-------SSSEEEEEECHHHHHTTHHHHHHHH
T ss_pred HHHHCCCCEEEEeCCcHHHHHHHHHHHHCCCCEEeccHHHHHHHHHhc-------CCCeEEEEeChhhhhhHHHHHHHHH
Confidence 9999999999999999995 7899999999999999999998887631 2459999999999999999999987
Q ss_pred cC
Q 026201 239 ED 240 (241)
Q Consensus 239 ~G 240 (241)
.|
T Consensus 137 ~~ 138 (276)
T 2dwu_A 137 LD 138 (276)
T ss_dssp HC
T ss_pred hC
Confidence 53
No 15
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=99.80 E-value=4.2e-19 Score=156.66 Aligned_cols=130 Identities=16% Similarity=0.197 Sum_probs=103.3
Q ss_pred eEEEEe-CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHH
Q 026201 82 TVGIVG-GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVF 160 (241)
Q Consensus 82 ~IGIIG-GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~ 160 (241)
.|||+. |+|.+ ..++.|.+..+.. +++-+-|.. ..|+ .+.+|+++.+.+.+.+++
T Consensus 2 ~igvfDSG~GGl---tv~~~l~~~lP~~---~~iy~~D~~-----------~~Py-------g~~s~~~i~~~~~~~~~~ 57 (255)
T 2jfz_A 2 KIGVFDSGVGGF---SVLKSLLKARLFD---EIIYYGDSA-----------RVPY-------GTKDPTTIKQFGLEALDF 57 (255)
T ss_dssp EEEEEESSSTTH---HHHHHHHHTTCCS---EEEEEECTT-----------TCCC-------TTSCHHHHHHHHHHHHHH
T ss_pred cEEEEECCccHH---HHHHHHHHHCCCC---CEEEEeCCC-----------CCCC-------CCCCHHHHHHHHHHHHHH
Confidence 699999 99999 5667777766654 233222221 1111 456899999999999999
Q ss_pred HHHhCCcEEEEeCCchhh-hHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHHHHHHhc
Q 026201 161 LEKAGARCIVMPCHLSHI-WHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHE 239 (241)
Q Consensus 161 Le~~Gad~IvIaCNTAH~-~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~~~L~~~ 239 (241)
|++.|||+|||||||+|. +++++++.+++||++|++++++.+.+... ..++|||||||++|+++++|++.+++.
T Consensus 58 L~~~g~d~iviaCNTa~~~~~~~lr~~~~iPvigii~~av~~A~~~~~-----~~~~rigVlaT~~T~~~~~y~~~l~~~ 132 (255)
T 2jfz_A 58 FKPHEIELLIVACNTASALALEEMQKYSKIPIVGVIEPSILAIKRQVE-----DKNAPILVLGTKATIQSNAYDNALKQQ 132 (255)
T ss_dssp HGGGCCSCEEECCHHHHHHTHHHHHHHCSSCEECSSHHHHHHHHHHCC-----CTTSCEEEEECHHHHHHTHHHHHHHHT
T ss_pred HHHCCCCEEEEeCchhhHHHHHHHHHhCCCCEEeeeHHHHHHHHHhhc-----CCCCEEEEEECHHHHhChHHHHHHHHc
Confidence 999999999999999996 78999999999999998998887765300 123499999999999999999999987
Q ss_pred C
Q 026201 240 D 240 (241)
Q Consensus 240 G 240 (241)
|
T Consensus 133 g 133 (255)
T 2jfz_A 133 G 133 (255)
T ss_dssp T
T ss_pred C
Confidence 6
No 16
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=99.79 E-value=7.7e-19 Score=157.69 Aligned_cols=129 Identities=14% Similarity=0.189 Sum_probs=101.3
Q ss_pred CCeEEEE-eCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 80 ANTVGIV-GGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 80 ~k~IGII-GGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
.+.|||+ .|+|.. .++++|.+..+.. .++-+.|.. ..|+ ...+.+++.++..+.+
T Consensus 21 ~~~IgvfDSGvGGl---tv~~~i~~~lP~~---~~iy~~D~~-----------~~Py-------G~~s~~~i~~~~~~i~ 76 (285)
T 2jfn_A 21 RPTVLVFDSGVGGL---SVYDEIRHLLPDL---HYIYAFDNV-----------AFPY-------GEKSEAFIVERVVAIV 76 (285)
T ss_dssp EEEEEEEESSSTHH---HHHHHHHHHSTTS---EEEEEECTT-----------TCCT-------TTSCHHHHHHHHHHHH
T ss_pred CCcEEEEeCCccHH---HHHHHHHHhCCCC---CeEEeeccC-----------CCCC-------ccCCHHHHHHHHHHHH
Confidence 4579999 599876 8899999998865 222222221 1111 2345677888888888
Q ss_pred HHH-HHhCCcEEEEeCCchhh-hHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHHHHH
Q 026201 159 VFL-EKAGARCIVMPCHLSHI-WHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKL 236 (241)
Q Consensus 159 ~~L-e~~Gad~IvIaCNTAH~-~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~~~L 236 (241)
++| ++.|||+|||||||+|. +++++++.+++||++|++++.++++..+ ++|||||||++|+++++|++.+
T Consensus 77 ~~ll~~~g~d~IviaCNTas~~~l~~lr~~~~iPVigi~~a~~~a~~~~~--------~~rIgVLaT~~T~~s~~y~~~l 148 (285)
T 2jfn_A 77 TAVQERYPLALAVVACNTASTVSLPALREKFDFPVVGVVPAIKPAARLTA--------NGIVGLLATRGTVKRSYTHELI 148 (285)
T ss_dssp HHHHHHSCCSEEEECCHHHHHHHHHHHHHHCSSCEECCCCCHHHHHHHCS--------SSEEEEEECTTGGGCHHHHHHH
T ss_pred HHHHHhCCCCEEEEECccccHHHHHHHHHhCCCCEEehHHHHHHHHHhcC--------CCEEEEEEcHHHHhhHHHHHHH
Confidence 877 45899999999999995 8899999999999999887777765443 3499999999999999999999
Q ss_pred HhcC
Q 026201 237 QHED 240 (241)
Q Consensus 237 ~~~G 240 (241)
++.|
T Consensus 149 ~~~g 152 (285)
T 2jfn_A 149 ARFA 152 (285)
T ss_dssp HHSC
T ss_pred HHhC
Confidence 9887
No 17
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=99.57 E-value=2.9e-15 Score=133.78 Aligned_cols=134 Identities=13% Similarity=0.121 Sum_probs=96.7
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
.++||+|+++++.++..++.++.... . .+.+..++ ..++. .+.++... ..+.+.+.+.++
T Consensus 25 ~~rIGlI~p~s~~s~e~~~~~~~~~~-~--~~~~~~~~-ar~~~----~~v~~~~l------------~~~~~~l~~aa~ 84 (273)
T 2xed_A 25 IRRIGLVVPSSNVTVETEMPALLSRH-P--GAEFSFHS-TRMRM----HTVSPEGL------------AAMNAQRERCVL 84 (273)
T ss_dssp SEEEEEEEETTCCSHHHHHHHHHTTC-S--SCCEEEEE-EEECC----CBCSHHHH------------HHHHTTHHHHHH
T ss_pred CCEEEEEECCCchhHHHHHHHHhccc-c--cCCeEEEE-eCCcc----CCCCHHHH------------HHHHHHHHHHHH
Confidence 45899999999999999876664321 1 00122212 11110 01222111 123334677889
Q ss_pred HHHHhCCcEEEEeCCchhhhH---------HHHhccC-----CCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHH
Q 026201 160 FLEKAGARCIVMPCHLSHIWH---------DEVCKGC-----SVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNA 225 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~~~---------d~l~~~~-----~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~ 225 (241)
.|+++|+|+|+++|||+|.++ ++|++.+ ++|++++++++++.++..+.+ |||||+|-.
T Consensus 85 ~L~~~g~d~IviaCnta~~~~G~~~~~~~~~~l~~~~~~~~~~iPv~~~~~A~~~al~~~g~~--------rvgvltp~~ 156 (273)
T 2xed_A 85 EIADAAPEVILYACLVAVMVGGPGEHHRVESAVAEQLATGGSQALVRSSAGALVEGLRALDAQ--------RVALVTPYM 156 (273)
T ss_dssp HHHTTCCSEEEECCHHHHHTTCTTHHHHHHHHHHHHHHHTTCCCEEEEHHHHHHHHHHHTTCC--------EEEEEECSC
T ss_pred HHhhcCCCEEEECCChHHHhcccchhHHHHHHHHHHhhccCCCCCEecHHHHHHHHHHHcCCC--------eEEEEcCCh
Confidence 999999999999999999885 9999998 999999999999999877655 999998766
Q ss_pred HHhhhhHHHHHHhcCC
Q 026201 226 ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 226 T~~s~~Y~~~L~~~G~ 241 (241)
+..+++|++.|++.|+
T Consensus 157 ~~~~~~~~~~l~~~Gi 172 (273)
T 2xed_A 157 RPLAEKVVAYLEAEGF 172 (273)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred hhhHHHHHHHHHHCCC
Confidence 6678899999999885
No 18
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=99.54 E-value=2.9e-14 Score=125.72 Aligned_cols=132 Identities=7% Similarity=-0.012 Sum_probs=97.1
Q ss_pred eEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 026201 82 TVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFL 161 (241)
Q Consensus 82 ~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~L 161 (241)
+|.||=-.+..+.-+-+++..+.... ...+++.++.|.-|. ..+...||......+.+.++.|
T Consensus 3 rilvINPnts~~~T~~i~~~~~~~~~-p~~~i~~~t~~~gp~----------------~i~~~~d~~~a~~~l~~~~~~l 65 (245)
T 3qvl_A 3 RIQVINPNTSLAMTETIGAAARAVAA-PGTEILAVCPRAGVP----------------SIEGHFDEAIAAVGVLEQIRAG 65 (245)
T ss_dssp EEEEECSSCCHHHHHHHHHHHHHHCC-TTEEEEEECCSSSCS----------------SCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHhcC-CCCEEEEEeCCCCch----------------hhcChhHHHHHHHHHHHHHHHH
Confidence 57777544444433334443333322 356677777442111 1124557888888888888999
Q ss_pred HHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHHHHHHhcCC
Q 026201 162 EKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEKLQHEDC 241 (241)
Q Consensus 162 e~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~~~L~~~G~ 241 (241)
++.|+|+|||+|||+|.+ +++++.+++||++|++++++.+...+ +|||||+|.+|+. +.|++.+++.|.
T Consensus 66 ~~~g~d~iviaCnt~~~l-~~lr~~~~iPvigi~e~~~~~a~~~~---------~rigVlaT~~t~~-~~~~~~l~~~g~ 134 (245)
T 3qvl_A 66 REQGVDGHVIASFGDPGL-LAARELAQGPVIGIAEAAMHMATMVA---------TRFSIVTTLPRTL-IIARHLLHQYGF 134 (245)
T ss_dssp HHHTCSEEEEC-CCCTTH-HHHHHHCSSCEEEHHHHHHHHHHHHC---------SCEEEEESCGGGH-HHHHHHHHHHTC
T ss_pred HHCCCCEEEEeCCChhHH-HHHHHHcCCCEECccHHHHHHHHHcC---------CEEEEEEcchhHH-HHHHHHHHHcCC
Confidence 999999999999999987 99999999999999999998887753 3899999999986 899999998773
No 19
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=99.53 E-value=1.5e-14 Score=124.30 Aligned_cols=122 Identities=15% Similarity=0.091 Sum_probs=92.0
Q ss_pred eEEEEeCCChHHHHH-HHHHHHHHhccCCCCCEEEecCccc-hHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 82 TVGIVGGASVDSTLN-LLGKLVQLSGEENDFPFLLCSDPLL-NKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 82 ~IGIIGGmGp~AT~~-fy~kI~~~t~~d~~~~~vi~S~p~i-~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
+||+|+++++.++.. |++.+ +.+ +-+++ ..+ + .++. ...++..+.+.+.+.++
T Consensus 7 ~IG~i~p~s~~~~e~~~~~~~----~~~----v~~~~-~r~~~----~~~~------------~~~~~~~~~~~l~~~a~ 61 (223)
T 2dgd_A 7 RIGVILPANNAGMEYDLWKMA----PEG----VSIHS-TRMKP----TKGC------------EPENVEEFEKELKYSYS 61 (223)
T ss_dssp EEEEEEETTCCSHHHHHHHHC----CTT----EEEEE-EEECC----CSSS------------SCSCHHHHHHHHHHHHH
T ss_pred eEEEEECCCcccHHHHHHHHc----cCC----eEEEE-Eeeec----CCCC------------CHHHHHHHHHHHHHHHH
Confidence 899999999999998 55543 222 11111 111 0 0011 22346667777888999
Q ss_pred HHHHhCCcEEEEeCCchhhhH----HHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHHHH
Q 026201 160 FLEKAGARCIVMPCHLSHIWH----DEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQEK 235 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~~~----d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~~~ 235 (241)
.|+++ ||+|+++|||+|.++ +++++.+++| +++++++++..+.+ |||||+|..+..+++|++.
T Consensus 62 ~L~~~-~d~ivi~Cnt~~~~~g~~~~~l~~~~~iP----~~a~~~a~~~~g~~--------rvgvlt~~~~~~~~~~~~~ 128 (223)
T 2dgd_A 62 LLAEV-SDIIIYGRTYGTHKHAHVIKRVIKDVVIP----EESVYELLKKLNVR--------KLWIGTPYIKERTLEEVEW 128 (223)
T ss_dssp HHTTT-CSEEEECCCTTTTTCHHHHHHHSTTCBCH----HHHHHHHHHHTTCC--------EEEEEESSCHHHHHHHHHH
T ss_pred Hhhcc-CCEEEEcCCHHHHhhhHHHHHHHHhcCCC----HHHHHHHHHHcCCC--------eEEEEeCCchHHHHHHHHH
Confidence 99999 999999999999886 9999999999 78898888776544 9999987666668899999
Q ss_pred HHhcCC
Q 026201 236 LQHEDC 241 (241)
Q Consensus 236 L~~~G~ 241 (241)
|++.|+
T Consensus 129 l~~~G~ 134 (223)
T 2dgd_A 129 WRNKGF 134 (223)
T ss_dssp HHTTTC
T ss_pred HHhCCc
Confidence 999885
No 20
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=99.42 E-value=1.2e-13 Score=118.49 Aligned_cols=83 Identities=18% Similarity=0.189 Sum_probs=71.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHH
Q 026201 147 DSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAI 226 (241)
Q Consensus 147 ~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T 226 (241)
+......+.+.+++|++.|+|+|+++|||+ .+++++++.+++|+++|++++++.+...+ +|||||+|.+|
T Consensus 57 ~~~~~~~l~~~~~~l~~~g~d~iviaCnta-~~~~~l~~~~~iPvi~i~~~~~~~a~~~~---------~rigVlat~~t 126 (228)
T 2eq5_A 57 EREAEPKIIRLAKEFEREGVDAIIISCAAD-PAVEKVRKLLSIPVIGAGSSVSALALAYG---------RRVGVLNLTEE 126 (228)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECSTTC-TTHHHHHHHCSSCEEEHHHHHHHHHHTTC---------SSEEEECSSSC
T ss_pred HHHhHHHHHHHHHHHHHCCCCEEEEeCCch-HHHHHHHHhCCCCEeCccHHHHHHHHHhC---------CeEEEEecCcc
Confidence 444555677788899999999999999999 88999999999999999999998876532 39999999999
Q ss_pred HhhhhHHHHH-HhcC
Q 026201 227 LTAGFYQEKL-QHED 240 (241)
Q Consensus 227 ~~s~~Y~~~L-~~~G 240 (241)
+.+ .|++.+ ++.|
T Consensus 127 ~~~-~~~~~~~~~~g 140 (228)
T 2eq5_A 127 TPK-VIRSILGNNLI 140 (228)
T ss_dssp CCH-HHHHHHGGGEE
T ss_pred cHH-HHHHHHHHHhC
Confidence 995 799999 8776
No 21
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=99.37 E-value=9.5e-13 Score=115.48 Aligned_cols=88 Identities=14% Similarity=0.133 Sum_probs=76.2
Q ss_pred CHHHHHHH---HHHHHHHHHHhCCcEEEEeCCchhhh---------HHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCC
Q 026201 146 DDSLIVEN---LRRKRVFLEKAGARCIVMPCHLSHIW---------HDEVCKGCSVPFLHVSECVAKELKEANMKPLEAG 213 (241)
Q Consensus 146 d~~~i~~~---l~~~~~~Le~~Gad~IvIaCNTAH~~---------~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~ 213 (241)
..+.+.++ +.+.++.|+++|+|+|+++|||+|.| .++|++.+++|++++.+++++++++.|.+
T Consensus 44 t~e~l~~~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~G~~~~~~~~~~l~~~~~iPv~~~~~A~~~al~~~g~~----- 118 (240)
T 3ixl_A 44 TPEGYDAVIESVVDHARRLQKQGAAVVSLMCTSLSFYRGAAFNAALTVAMREATGLPCTTMSTAVLNGLRALGVR----- 118 (240)
T ss_dssp SHHHHHHHGGGHHHHHHHHHHTTEEEEEECCHHHHHTTCHHHHHHHHHHHHHHHSSCEEEHHHHHHHHHHHTTCS-----
T ss_pred CHHHHHHHHHHHHHHHHHhccCCCCEEEECCcHHHHhcccchHHHHHHHHHhccCCCEECHHHHHHHHHHHhCCC-----
Confidence 34444444 67889999999999999999999974 49999999999999999999999998776
Q ss_pred CCCEEEEEecHHHHhhhhHHHHHHhcCC
Q 026201 214 SPLRIGVLAKNAILTAGFYQEKLQHEDC 241 (241)
Q Consensus 214 ~~~rVGLLaT~~T~~s~~Y~~~L~~~G~ 241 (241)
||||++|-.+..+++|++.|++.||
T Consensus 119 ---rvglltpy~~~~~~~~~~~l~~~Gi 143 (240)
T 3ixl_A 119 ---RVALATAYIDDVNERLAAFLAEESL 143 (240)
T ss_dssp ---EEEEEESSCHHHHHHHHHHHHHTTC
T ss_pred ---EEEEEeCChHHHHHHHHHHHHHCCC
Confidence 9999999666668999999999986
No 22
>2qh8_A Uncharacterized protein; conserved domain protein, structural genomics, PSI-2, MCSG, BIG_563.1, protein structure initiative; HET: HIS; 2.20A {Vibrio cholerae o1 biovar eltor str} PDB: 3lkv_A*
Probab=96.92 E-value=0.033 Score=48.06 Aligned_cols=75 Identities=13% Similarity=0.086 Sum_probs=47.0
Q ss_pred HHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc-----------------------------HHHHHHHHHh--
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS-----------------------------ECVAKELKEA-- 205 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii-----------------------------d~t~~~i~~~-- 205 (241)
.++.|.+.++|.|++....+..... ....++|+|-+. ..+++.+.+.
T Consensus 61 ~~~~l~~~~vDgII~~~~~~~~~~~--~~~~~iPvV~~~~~~~~~~~~v~~~~~~~~~~~gv~~~~~~~~~~~~l~~~~P 138 (302)
T 2qh8_A 61 IARQFVGENPDVLVGIATPTAQALV--SATKTIPIVFTAVTDPVGAKLVKQLEQPGKNVTGLSDLSPVEQHVELIKEILP 138 (302)
T ss_dssp HHHHHHHTCCSEEEEESHHHHHHHH--HHCSSSCEEEEEESCTTTTTSCSCSSSCCSSEEEEECCCCHHHHHHHHHHHST
T ss_pred HHHHHHhCCCCEEEECChHHHHHHH--hcCCCcCEEEEecCCHhhcCccccccCCCCCEEEEECCcCHHHHHHHHHHhCC
Confidence 3467788999999887543222222 224578877432 1245777776
Q ss_pred cCCCCCCCCCCEEEEEecHH----HHhhhhHHHHHHhcCC
Q 026201 206 NMKPLEAGSPLRIGVLAKNA----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 206 ~~k~~~~~~~~rVGLLaT~~----T~~s~~Y~~~L~~~G~ 241 (241)
|.| |||+++.+. .-+..-|++.++++|+
T Consensus 139 g~~--------~I~~i~~~~~~~~~~r~~g~~~al~~~gi 170 (302)
T 2qh8_A 139 NVK--------SIGVVYNPGEANAVSLMELLKLSAAKHGI 170 (302)
T ss_dssp TCC--------EEEEEECTTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCc--------EEEEEecCCCcchHHHHHHHHHHHHHcCC
Confidence 655 999997653 2233558888888775
No 23
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=96.77 E-value=0.0092 Score=52.75 Aligned_cols=127 Identities=13% Similarity=0.124 Sum_probs=75.8
Q ss_pred cCCeEEEEeCCChHHHH--HHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTL--NLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRR 156 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~--~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~ 156 (241)
+.++|||||= .+|+ .+|++..+....+ ..+.....|.+-+.+.. ...+.+...+.+.+
T Consensus 110 ~~~~IGVLaT---~~Ti~s~~y~~~l~~~~~~--~~V~~~~~~~lV~~vE~---------------g~~~~~~~~~~l~~ 169 (268)
T 3out_A 110 NLNTVGVIAT---PATINSNAYALQIHKKNPN--IEVYSNPCGLFVSMIEE---------------GFVSGHIVELVAKE 169 (268)
T ss_dssp TCSEEEEEEC---HHHHHHTHHHHHHHHHCTT--SEEEEEECTTHHHHHHT---------------TCCSSHHHHHHHHH
T ss_pred cCCeEEEEec---CcccccHHHHHHHHHhCCC--CEEecCCChHHHHHHHc---------------CCcCCHHHHHHHHH
Confidence 4679999953 3455 3777776655432 12222223332222211 11122344566777
Q ss_pred HHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHh-cCCCCCC--CCCCEEEEEecHH
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEA-NMKPLEA--GSPLRIGVLAKNA 225 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~-~~k~~~~--~~~~rVGLLaT~~ 225 (241)
.++.|.+.|+|.||+.|--.-...+.+++..++|+|+=.+++++.+++. ..+++.. ....++-++.|..
T Consensus 170 ~l~~l~~~g~D~iILGCTh~pll~~~i~~~~~v~viD~~~~~a~~~~~~l~~~~~~~~~~~~~~~~~~~t~~ 241 (268)
T 3out_A 170 YLSYFHDKNIQALILGCTHYPIIKESIAKILDVKLIDPSLQASKMLYSLLFENKLLNTTKSNPEYRFYVTDI 241 (268)
T ss_dssp HHGGGTTSCCSEEEECSTTGGGGHHHHHHHCCSEEECCHHHHHHHHHHHHHHTTCCCCCC-CCCEEEEESCC
T ss_pred HHHHHHhCCCCEEEECCCChHHHHHHHhcCCCCceechHHHHHHHHHHHHHhccccccCCCCCcEEEEECCC
Confidence 7778888899999999975445568898888999999999988887763 1111111 1233566677654
No 24
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=96.69 E-value=0.0095 Score=51.91 Aligned_cols=105 Identities=17% Similarity=0.192 Sum_probs=65.3
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
.++||||+-.+.. ..+|++..+....+....-+... ..+ ..+ ...+.+...+.+.+.+.
T Consensus 109 ~~rigVlaT~~t~--~~~~~~~l~~~g~~~~~~~v~~~--~~~---------~~~--------l~~~~~~~~~~l~~~~~ 167 (245)
T 3qvl_A 109 ATRFSIVTTLPRT--LIIARHLLHQYGFHQHCAALHAI--DLP---------VLA--------LEDGSGLAQEKVRERCI 167 (245)
T ss_dssp CSCEEEEESCGGG--HHHHHHHHHHHTCGGGEEEEEEC--CSC---------GGG--------GGSSSSHHHHHHHHHHH
T ss_pred CCEEEEEEcchhH--HHHHHHHHHHcCCCCeEEEEeCC--CCC---------HHH--------HcCCcHHHHHHHHHHHH
Confidence 5799999766654 37888887766543111111111 000 000 00112233444555443
Q ss_pred -HHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHh
Q 026201 160 -FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 160 -~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~ 205 (241)
.+++.|+|.||+.|--.-.+.+.|++.+++|+|+-.+++++.+...
T Consensus 168 ~~~~~~gad~IVLGCTh~p~l~~~i~~~~gVpvID~~~a~~~~~~~l 214 (245)
T 3qvl_A 168 RALKEDGSGAIVLGSGGMATLAQQLTRELRVPVIDGVSAAVKMVESL 214 (245)
T ss_dssp HHHHHSCCSEEEECCGGGGGGHHHHHHHHTSCEECHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEECCCChHHHHHHHHHHcCCeEEccHHHHHHHHHHH
Confidence 4556899999999986655679999989999999999998887653
No 25
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=96.65 E-value=0.014 Score=51.17 Aligned_cols=109 Identities=13% Similarity=0.157 Sum_probs=68.0
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
+.++|||||--+...+ .+|++..+..... ..++....|..-..+.. ...+.+...+.+.+.+
T Consensus 108 ~~~rIgVlaT~~T~~~-~~y~~~l~~~~~g--~~v~~~~~~~~v~~ie~---------------g~~~~~~~~~~l~~~~ 169 (267)
T 2gzm_A 108 NTYHVGIIGTIGTVKS-GAYEEALKSINNR--VMVESLACPPFVELVES---------------GNFESEMAYEVVRETL 169 (267)
T ss_dssp SSCEEEEEECHHHHHH-THHHHHHHHHCTT--CEEEEEECTTHHHHHHT---------------TCSSSHHHHHHHHHHH
T ss_pred CCCEEEEEEChHHhcc-HHHHHHHHHhCCC--CEEeccCCHHHHHHHhC---------------CCCCCHHHHHHHHHHH
Confidence 4679999954333322 3677776665322 22332222322221111 1112244556677777
Q ss_pred HHHHHhCCcEEEEeCCchhhhHHHHhccC--CCCeeeccHHHHHHHHHh
Q 026201 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGC--SVPFLHVSECVAKELKEA 205 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~~d~l~~~~--~vPil~Iid~t~~~i~~~ 205 (241)
+.|.+.|+|.||+.|--.....+++++.+ ++|+|+-.+++++++.+.
T Consensus 170 ~~l~~~~~d~iVLGCTh~p~l~~~i~~~~~~~vpviDs~~~~a~~~~~~ 218 (267)
T 2gzm_A 170 QPLKNTDIDTLILGCTHYPILGPVIKQVMGDKVQLISSGDETAREVSTI 218 (267)
T ss_dssp HHHHHSCCSEEEECSTTGGGGHHHHHHHHCTTSEEEEHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcccChHHHHHHHHHHcCCCCEEECcHHHHHHHHHHH
Confidence 78888899999999975555678898766 899999999988777653
No 26
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=96.55 E-value=0.016 Score=50.94 Aligned_cols=108 Identities=13% Similarity=0.177 Sum_probs=67.8
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
+.++|||||--+...+ .+|++..+....+ ..++....|..-+.+. ....+.+...+.+.+.+
T Consensus 109 ~~~rIgVlaT~~T~~s-~~y~~~i~~~~~~--~~v~~~~~~~~v~~ve---------------~g~~~~~~~~~~l~~~l 170 (272)
T 1zuw_A 109 DNQHIGVIGTENTIKS-NAYEEALLALNPD--LKVENLACPLLVPFVE---------------SGKFLDQTADEIVKTSL 170 (272)
T ss_dssp SSSEEEEEECHHHHHT-THHHHHHHHHCTT--CEEEEEECTTHHHHHT---------------SCCCCHHHHHHHHHHHH
T ss_pred CCCEEEEEEChhhhhh-hHHHHHHHHhCCC--CEEEeccCHHHHHHHH---------------CCCCCCHHHHHHHHHHH
Confidence 4679999965333322 3566665554222 2233222333222221 11223345566677777
Q ss_pred HHHHHhCCcEEEEeCCchhhhHHHHhccC--CCCeeeccHHHHHHHHH
Q 026201 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGC--SVPFLHVSECVAKELKE 204 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~~d~l~~~~--~vPil~Iid~t~~~i~~ 204 (241)
+.|.+.|+|.||+.|--.....+.+++.+ ++|+|+-.+++++.+.+
T Consensus 171 ~~l~~~~~D~iVLGCTh~pll~~~i~~~~~~~v~vIDs~~~~a~~~~~ 218 (272)
T 1zuw_A 171 YPLKDTSIDSLILGCTHYPILKEAIQRYMGEHVNIISSGDETAREVST 218 (272)
T ss_dssp HHHHHSCCSEEEEESTTGGGGHHHHHHHHCTTSEEEEHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEECccCHHHHHHHHHHHcCCCCeEECcHHHHHHHHHH
Confidence 88888899999999986666678898766 89999999988887654
No 27
>2dwu_A Glutamate racemase; isomerase; HET: DGL; 1.60A {Bacillus anthracis}
Probab=96.43 E-value=0.018 Score=50.66 Aligned_cols=108 Identities=15% Similarity=0.225 Sum_probs=68.2
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
+.++|||||--+...+ .+|++..+....+ ..++-...|..-+.+..+ ..+.+...+.+.+.+
T Consensus 112 ~~~rIgVlaT~~T~~s-~~y~~~i~~~~~~--~~v~~~~~~~~v~~ve~g---------------~~~~~~~~~~l~~~l 173 (276)
T 2dwu_A 112 KKGKIGVIGTVGTIQS-NMYEKALHELDTY--LKVHSHACPTLATVVENR---------------LEDTAYVTQQVKQAL 173 (276)
T ss_dssp SSSEEEEEECHHHHHT-THHHHHHHHHCTT--CEEEEEECTTHHHHHHHS---------------TTCHHHHHHHHHHHH
T ss_pred CCCeEEEEeChhhhhh-HHHHHHHHHhCCC--CEEEeeeCHHHHHHHHcC---------------CcCCHHHHHHHHHHH
Confidence 4578999954333333 2667666554322 223222333332222211 112244556677777
Q ss_pred HHHHHhCCcEEEEeCCchhhhHHHHhccC--CCCeeeccHHHHHHHHH
Q 026201 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGC--SVPFLHVSECVAKELKE 204 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~~d~l~~~~--~vPil~Iid~t~~~i~~ 204 (241)
+.|.+.|+|.||+.|--.....+.+++.+ ++|+|+-.+++++.+.+
T Consensus 174 ~~l~~~~~D~IVLGCTh~p~l~~~i~~~~~~~v~vIDs~~~~a~~~~~ 221 (276)
T 2dwu_A 174 LPLTKEDIDTLILGCTHYPLLESYIKKELGEDVTIISSAEETAIELST 221 (276)
T ss_dssp HHHHTSCCSEEEECSTTGGGGHHHHHHHHCTTSEEEEHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEECCCCHHHHHHHHHHHcCCCCeEECcHHHHHHHHHH
Confidence 88888999999999986666678898866 89999999998888665
No 28
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=96.41 E-value=0.014 Score=51.77 Aligned_cols=108 Identities=7% Similarity=0.052 Sum_probs=66.6
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHH-HHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLI-VENLRRK 157 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i-~~~l~~~ 157 (241)
+.++|||||--+... ..+|++..+....+ ..++....|..-+.+.. ...+.+.. .+.+.+.
T Consensus 127 ~~~rIgVLaT~~T~~-~~~y~~~l~~~~~~--~~v~~~~~~~~v~~ie~---------------g~~~~~~~~~~~l~~~ 188 (286)
T 2jfq_A 127 RNQNVLVLGTEGTIK-SEAYRTHIKRINPH--VEVHGVACPGFVPLVEQ---------------MRYSDPTITSIVIHQT 188 (286)
T ss_dssp SSSEEEEEECHHHHH-HTHHHHHHHHHCTT--CEEEEEECTTHHHHHHT---------------TCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEeChHHhc-chHHHHHHHHhCCC--CEEEecCCHHHHHHHHc---------------CCCCCchhHHHHHHHH
Confidence 457899996333332 23566666554222 22332223332222211 11111334 5667777
Q ss_pred HHHHHHhCCcEEEEeCCchhhhHHHHhccC--CCCeeeccHHHHHHHHH
Q 026201 158 RVFLEKAGARCIVMPCHLSHIWHDEVCKGC--SVPFLHVSECVAKELKE 204 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~--~vPil~Iid~t~~~i~~ 204 (241)
++.|.+.|+|.||+.|--.-...+++++.+ ++|+|+-.+++++.+.+
T Consensus 189 ~~~l~~~g~D~IVLGCTh~p~l~~~i~~~l~~~vpvIDs~~a~a~~~~~ 237 (286)
T 2jfq_A 189 LKRWRNSESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSA 237 (286)
T ss_dssp HGGGTTCSCSEEEEESSSGGGGHHHHHHHTTTCSEEEEHHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEEcCcCHHHHHHHHHHHcCCCCEEECcHHHHHHHHHH
Confidence 777878899999999976556678898877 89999999988887665
No 29
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=96.11 E-value=0.013 Score=52.12 Aligned_cols=108 Identities=11% Similarity=0.132 Sum_probs=67.0
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
+.++|||||--+...+ .+|++..+....+ ..++-...|.+-+.+..+ ..+.+...+.+.+.+
T Consensus 129 ~~~rIgVLaT~~T~~s-~~y~~~l~~~~~~--~~v~~~~~~~lv~~ve~g---------------~~~~~~~~~~l~~~l 190 (290)
T 2vvt_A 129 KNNKIGVIGTLGTIKS-ASYEIAIKSKAPA--IEVTSLACPKFVPIVESN---------------QYRSSVAKKIVAETL 190 (290)
T ss_dssp SSSEEEEEECHHHHHT-THHHHHHHTTCTT--SEEEEEECTTHHHHHHTT---------------CTTSHHHHHHHHHHH
T ss_pred CCCEEEEEeCcHhhhh-HHHHHHHHHhCCC--CEEEeccCHHHHHHHHcC---------------CCCCHHHHHHHHHHH
Confidence 3578999964433332 2677666554222 233322333332222211 112244556677777
Q ss_pred HHHHHhCCcEEEEeCCchhhhHHHHhccC--CCCeeeccHHHHHHHHH
Q 026201 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGC--SVPFLHVSECVAKELKE 204 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~~d~l~~~~--~vPil~Iid~t~~~i~~ 204 (241)
+.|.+.|+|.||+.|--.-.+.+.+++.+ ++|+|+-.+++++.+.+
T Consensus 191 ~~l~~~g~D~IVLGCTh~p~l~~~i~~~l~~~vpvIDs~~a~a~~~~~ 238 (290)
T 2vvt_A 191 QALQLKGLDTLILGCTHYPLLRPVIQNVMGSHVTLIDSGAETVGEVSM 238 (290)
T ss_dssp GGGTTSCCSEEEECSTTGGGGHHHHHHHHCTTCEEEEHHHHHHHHHHH
T ss_pred HHHHhCCCCEEEECCcCHHHHHHHHHHHcCCCCeEECcHHHHHHHHHH
Confidence 77888899999999975555678898866 89999999988887665
No 30
>3lft_A Uncharacterized protein; ABC, ATPase, cassette, L-Trp, PSI, MCSG, structural genomics center for structural genomics; HET: MSE TRP; 1.35A {Streptococcus pneumoniae}
Probab=95.99 E-value=0.13 Score=43.95 Aligned_cols=75 Identities=13% Similarity=0.088 Sum_probs=46.6
Q ss_pred HHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc-----------------------------HHHHHHHHHh--
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS-----------------------------ECVAKELKEA-- 205 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii-----------------------------d~t~~~i~~~-- 205 (241)
.++.|.+.++|.|++....+..... ....++|+|-+. ..+++.+.+.
T Consensus 54 ~~~~l~~~~vDgII~~~~~~~~~~~--~~~~~iPvV~~~~~~~~~~~~v~~~~~~~~~~~gv~~~~~~~~~~~~l~~~~p 131 (295)
T 3lft_A 54 MSKQLVANGNDLVVGIATPAAQGLA--SATKDLPVIMAAITDPIGANLVKDLKKPGGNVTGVSDHNPAQQQVELIKALTP 131 (295)
T ss_dssp HHHHHTTSSCSEEEEESHHHHHHHH--HHCSSSCEEEESCSCTTTTTSCSCSSCCCSSEEEEEECCCHHHHHHHHHHHCT
T ss_pred HHHHHHhcCCCEEEECCcHHHHHHH--HcCCCCCEEEEeccChhhcCccccccCCCCcEEEEECCccHHHHHHHHHHhCC
Confidence 3456788899998887643322222 223567876531 1345777776
Q ss_pred cCCCCCCCCCCEEEEEecHH----HHhhhhHHHHHHhcCC
Q 026201 206 NMKPLEAGSPLRIGVLAKNA----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 206 ~~k~~~~~~~~rVGLLaT~~----T~~s~~Y~~~L~~~G~ 241 (241)
|.| |||+++.+. ..+..-|++.+++.|+
T Consensus 132 g~~--------~I~~i~~~~~~~~~~r~~g~~~al~~~gi 163 (295)
T 3lft_A 132 NVK--------TIGALYSSSEDNSKTQVEEFKAYAEKAGL 163 (295)
T ss_dssp TCC--------EEEEEEETTCHHHHHHHHHHHHHHHHTTC
T ss_pred CCc--------EEEEEeCCCCcchHHHHHHHHHHHHHcCC
Confidence 555 999997543 2233558888888775
No 31
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=95.62 E-value=0.041 Score=48.65 Aligned_cols=108 Identities=10% Similarity=0.108 Sum_probs=66.2
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
+.++|||||=-+...+ .+|++..+....+ ..+.....|..-+.+.. ...+.+...+.+.+.+
T Consensus 110 ~~~~IGVLaT~~Ti~s-~~y~~~i~~~~~~--~~v~~~~~~~lV~~vE~---------------g~~~~~~~~~~l~~~l 171 (269)
T 3ist_A 110 RNNKIGVLGTLGTVES-MAYPTALKGLNRR--VEVDSLACPKFVSVVES---------------GEYKSAIAKKVVAESL 171 (269)
T ss_dssp SSSEEEEEECHHHHHH-THHHHHHHHHCTT--CEEEEEECHHHHHHHHT---------------TCTTSHHHHHHHHHHH
T ss_pred CCCeEEEEeccchhhH-HHHHHHHHHhCCC--CEEeccCCHHHHHHHHc---------------CCCCCHHHHHHHHHHH
Confidence 4679999954433322 4676666554322 22222222322222211 1112234556677777
Q ss_pred HHHHHhCCcEEEEeCCchhhhHHHHhccC--CCCeeeccHHHHHHHHH
Q 026201 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGC--SVPFLHVSECVAKELKE 204 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~~d~l~~~~--~vPil~Iid~t~~~i~~ 204 (241)
+.|.+.|+|.||+.|-=.-...+.+++.. ++|+|+=.+++++.+++
T Consensus 172 ~~l~~~g~D~iVLGCTh~pll~~~i~~~~~~~v~vIDs~~~~a~~~~~ 219 (269)
T 3ist_A 172 LPLKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSA 219 (269)
T ss_dssp GGGGGSCCCEEEECSTTGGGGHHHHHHHHCTTSEEECTHHHHHHHHHH
T ss_pred HHHHhCCCCEEEECCCCHHHHHHHHHHHcCCCCeEECcHHHHHHHHHH
Confidence 78888999999999974444568888754 69999999999888775
No 32
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=95.24 E-value=0.057 Score=47.35 Aligned_cols=107 Identities=12% Similarity=0.141 Sum_probs=64.3
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
+.++|||||--+...+ .+|++..+..... ..++....|..-+.+. ....+.+...+.+.+.+
T Consensus 117 ~~~rIgVlaT~~T~~~-~~y~~~l~~~~~g--~~v~~~~~~~~v~~ie---------------~g~~~~~~~~~~l~~~~ 178 (273)
T 2oho_A 117 TKGQVGVIGTPMTVAS-DIYRKKIQLLAPS--IQVRSLACPKFVPIVE---------------SNEMCSSIAKKIVYDSL 178 (273)
T ss_dssp SSSEEEEEECHHHHHH-THHHHHHHHHCTT--SEEEEEECTTHHHHHC---------------C-----HHHHHHHHHHH
T ss_pred CCCeEEEEECchhhcc-hHHHHHHHHhCCC--CEEEecCCHHHHHHHH---------------CCCCCCHHHHHHHHHHH
Confidence 3578999964443333 4666666654322 3333223333211111 11112244556677777
Q ss_pred HHHHHhCCcEEEEeCCchhhhHHHHhccC--CCCeeeccHHHHHHHHH
Q 026201 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGC--SVPFLHVSECVAKELKE 204 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~~d~l~~~~--~vPil~Iid~t~~~i~~ 204 (241)
+.|.+. +|.||+.|--...+.+++++.+ ++|+|+-.+++++++.+
T Consensus 179 ~~l~~~-~d~iVLGCTh~p~l~~~i~~~~~~~vpviDs~~~~a~~~~~ 225 (273)
T 2oho_A 179 APLVGK-IDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISV 225 (273)
T ss_dssp TTTTTS-CSEEEECSTTGGGGHHHHHHHHCTTSEEEEHHHHHHHHHHH
T ss_pred HHHHhc-CCEEEEcCCCHHHHHHHHHHHhCCCCEEECcHHHHHHHHHH
Confidence 777666 9999999976656678898765 79999999998877665
No 33
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=95.17 E-value=0.23 Score=42.86 Aligned_cols=126 Identities=10% Similarity=0.108 Sum_probs=71.7
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
..++||||| ...-....+|++..+... . ..++-...+.+-+.+..+ ..+.+...+.+.+.+
T Consensus 107 ~~~rigVla-T~~T~~~~~y~~~l~~~g-~--~~v~~~~~~~lv~~ie~g---------------~~~~~~~~~~l~~~~ 167 (255)
T 2jfz_A 107 KNAPILVLG-TKATIQSNAYDNALKQQG-Y--LNISHLATSLFVPLIEES---------------ILEGELLETCMHYYF 167 (255)
T ss_dssp TTSCEEEEE-CHHHHHHTHHHHHHHHTT-C--CCEEEEECTTHHHHHHTT---------------CCSSHHHHHHHHHHH
T ss_pred CCCEEEEEE-CHHHHhChHHHHHHHHcC-C--CEEEecChHHHHHHHHhc---------------ccCCHHHHHHHHHHH
Confidence 467999994 333333347777766654 2 122222233332222211 111123344455444
Q ss_pred HHHHHhCCcEEEEeCCchhhhHHHHhccC--------CCCeeeccHHHHHHHHHhc-CCCCCCCCCCEEEEEecHH
Q 026201 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGC--------SVPFLHVSECVAKELKEAN-MKPLEAGSPLRIGVLAKNA 225 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~~d~l~~~~--------~vPil~Iid~t~~~i~~~~-~k~~~~~~~~rVGLLaT~~ 225 (241)
+. .+.|+|.||+.|--...+.+++++.+ ++|+|+-.+++++.+.+.- .+.+.. ...++-++.|..
T Consensus 168 ~~-~~~~~d~iILGCTh~p~l~~~i~~~~~~~~~~~~~v~viDs~~~~a~~~~~~l~~~~~~~-~~~~~~~~~t~~ 241 (255)
T 2jfz_A 168 TP-LEILPEVIILGCTHFPLIAQKIEGYFMGHFALPTPPLLIHSGDAIVEYLQQKYALKNNAC-TFPKVEFHASGD 241 (255)
T ss_dssp TT-CCSCCSEEEEESTTGGGGHHHHHHHHHHHSCCSSCCEEEEHHHHHHHHHHHHTTCCSCSC-SSCEEEEEESSC
T ss_pred hh-hcCCCCEEEEcCcChHHHHHHHHHHhCccccCCCCCEEECcHHHHHHHHHHHHHhccccC-CCCCEEEEECCC
Confidence 44 45799999999987766778888654 4999999999999888752 111111 113566666643
No 34
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=95.08 E-value=0.43 Score=39.46 Aligned_cols=121 Identities=13% Similarity=0.156 Sum_probs=67.9
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRR 156 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~ 156 (241)
.++||++=-- .+-.||..+.+...+. ....+++++.. .+.+... +
T Consensus 2 s~~Igvi~~~---~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~-------------------------~~~~~~~----~ 49 (272)
T 3o74_A 2 TRTLGFILPD---LENPSYARIAKQLEQGARARGYQLLIASSD-------------------------DQPDSER----Q 49 (272)
T ss_dssp CCEEEEEESC---TTCHHHHHHHHHHHHHHHHTTCEEEEEECT-------------------------TCHHHHH----H
T ss_pred ceEEEEEeCC---CcChhHHHHHHHHHHHHHHCCCEEEEEeCC-------------------------CCHHHHH----H
Confidence 5789998632 2335777777766642 45566665411 1222222 2
Q ss_pred HHHHHHHhCCcEEEEeCCc--hhhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCC
Q 026201 157 KRVFLEKAGARCIVMPCHL--SHIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSP 215 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNT--AH~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~ 215 (241)
.++.|.+.++|.|++.... ....++.+++ .++|++-+ ...+++++.+.|.+
T Consensus 50 ~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~------- 121 (272)
T 3o74_A 50 LQQLFRARRCDALFVASCLPPEDDSYRELQD-KGLPVIAIDRRLDPAHFCSVISDDRDASRQLAASLLSSAPR------- 121 (272)
T ss_dssp HHHHHHHTTCSEEEECCCCCSSCCHHHHHHH-TTCCEEEESSCCCTTTCEEEEECHHHHHHHHHHHHHTTCCS-------
T ss_pred HHHHHHHcCCCEEEEecCccccHHHHHHHHH-cCCCEEEEccCCCccccCEEEEchHHHHHHHHHHHHHCCCc-------
Confidence 3456778899988775543 2334565554 35665543 23455666666544
Q ss_pred CEEEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 216 LRIGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 216 ~rVGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
||++++.+. ..+..-|.+.++++|+
T Consensus 122 -~i~~i~~~~~~~~~~~R~~gf~~~l~~~~~ 151 (272)
T 3o74_A 122 -SIALIGARPELSVSQARAGGFDEALQGYTG 151 (272)
T ss_dssp -EEEEEEECTTSHHHHHHHHHHHHHTTTCCS
T ss_pred -EEEEEecCCCCccHHHHHHHHHHHHHHcCC
Confidence 999997432 1223346777776653
No 35
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=94.94 E-value=0.33 Score=40.97 Aligned_cols=121 Identities=15% Similarity=0.176 Sum_probs=68.1
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+.++||++--- .+-.||..+.+...+. ....+++++.. .+.+...
T Consensus 7 ~~~~Igvi~~~---~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~-------------------------~~~~~~~---- 54 (285)
T 3c3k_A 7 KTGMLLVMVSN---IANPFCAAVVKGIEKTAEKNGYRILLCNTE-------------------------SDLARSR---- 54 (285)
T ss_dssp CCCEEEEEESC---TTSHHHHHHHHHHHHHHHHTTCEEEEEECT-------------------------TCHHHHH----
T ss_pred CCCEEEEEeCC---CCCchHHHHHHHHHHHHHHcCCEEEEEeCC-------------------------CCHHHHH----
Confidence 35689998632 1235777776666542 34455554310 1112212
Q ss_pred HHHHHHHHhCCcEEEEeCCc-hhhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCHL-SHIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSP 215 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNT-AH~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~ 215 (241)
+.++.|...++|.|++.... ....++.++ .++|++-+ ...+++++.+.|.+
T Consensus 55 ~~~~~l~~~~vdgiI~~~~~~~~~~~~~l~--~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~------- 125 (285)
T 3c3k_A 55 SCLTLLSGKMVDGVITMDALSELPELQNII--GAFPWVQCAEYDPLSTVSSVSIDDVAASEYVVDQLVKSGKK------- 125 (285)
T ss_dssp HHTHHHHTTCCSEEEECCCGGGHHHHHHHH--TTSSEEEESSCCTTSSSCEEECCHHHHHHHHHHHHHHTTCC-------
T ss_pred HHHHHHHhCCCCEEEEeCCCCChHHHHHHh--cCCCEEEEccccCCCCCCEEEEChHHHHHHHHHHHHHcCCC-------
Confidence 23356778899988876443 234556665 56776643 22355666666554
Q ss_pred CEEEEEecHH---H--HhhhhHHHHHHhcCC
Q 026201 216 LRIGVLAKNA---I--LTAGFYQEKLQHEDC 241 (241)
Q Consensus 216 ~rVGLLaT~~---T--~~s~~Y~~~L~~~G~ 241 (241)
||++++.+. + -+..-|.+.++++|+
T Consensus 126 -~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~ 155 (285)
T 3c3k_A 126 -RIALINHDLAYQYAQHRESGYLNRLKFHGL 155 (285)
T ss_dssp -CEEEEECCTTSHHHHHHHHHHHHHHHHHTC
T ss_pred -eEEEEeCCCccccHHHHHHHHHHHHHHcCC
Confidence 999997542 1 123347788877763
No 36
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=94.84 E-value=0.077 Score=44.87 Aligned_cols=55 Identities=24% Similarity=0.333 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHh
Q 026201 149 LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 149 ~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~ 205 (241)
...+.+.+.++.|.+.|+|.|++.|--...+.++++ .++|+++-.+.+++++.+.
T Consensus 170 ~~~~~l~~~~~~l~~~g~d~iiLGCT~~p~l~~~~~--~~vpviDs~~~~a~~~~~~ 224 (228)
T 1jfl_A 170 LGRELLLKTAKILEERGAECIIAGCTEVSVVLKQDD--LKVPLIDPMDVIAEVAVKV 224 (228)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEECSHHHHHHCCGGG--CSSCEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCcCEEEECCCChHhhhhhhc--CCCCEEChHHHHHHHHHHH
Confidence 346667777788888899999999975555556665 6799999999888887764
No 37
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=94.79 E-value=0.45 Score=39.80 Aligned_cols=76 Identities=9% Similarity=0.093 Sum_probs=44.8
Q ss_pred HHHHHHhCCcEEEEeCCch-hhhHHHHhccCCCCeeec--------------------cHHHHHHHHHhcCCCCCCCCCC
Q 026201 158 RVFLEKAGARCIVMPCHLS-HIWHDEVCKGCSVPFLHV--------------------SECVAKELKEANMKPLEAGSPL 216 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTA-H~~~d~l~~~~~vPil~I--------------------id~t~~~i~~~~~k~~~~~~~~ 216 (241)
++.|.+.++|.|++..... ....+.+++..++|+|-+ ...+++++.+.|.+
T Consensus 56 ~~~l~~~~vdgii~~~~~~~~~~~~~l~~~~~iPvV~~~~~~~~~~~~~~V~~d~~~~~~~~~~~L~~~G~~-------- 127 (289)
T 1dbq_A 56 LSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHR-------- 127 (289)
T ss_dssp HHHHHHTTCSEEEEECSCCCHHHHHHHHHTTTSCEEEEECSSCCSSSCEEEEECHHHHHHHHHHHHHHTTCC--------
T ss_pred HHHHHhCCCCEEEEEeccCCHHHHHHHHhccCCCEEEEccCCCccCcCCEEEeCcHHHHHHHHHHHHHCCCC--------
Confidence 4567788999888755433 344566654346665533 12345666666544
Q ss_pred EEEEEecHHH-----HhhhhHHHHHHhcCC
Q 026201 217 RIGVLAKNAI-----LTAGFYQEKLQHEDC 241 (241)
Q Consensus 217 rVGLLaT~~T-----~~s~~Y~~~L~~~G~ 241 (241)
||++++.+.. .+..-|.+.++++|+
T Consensus 128 ~i~~i~~~~~~~~~~~R~~g~~~~l~~~g~ 157 (289)
T 1dbq_A 128 EIGVIPGPLERNTGAGRLAGFMKAMEEAMI 157 (289)
T ss_dssp SEEEECCC------CHHHHHHHHHHHHTTC
T ss_pred eEEEEecCCccccHHHHHHHHHHHHHHCCC
Confidence 9999975421 123347788877763
No 38
>2dgd_A 223AA long hypothetical arylmalonate decarboxylas; octamer, alpha/beta structure, lyase; 2.90A {Sulfolobus tokodaii}
Probab=94.77 E-value=0.11 Score=43.77 Aligned_cols=52 Identities=10% Similarity=0.095 Sum_probs=41.4
Q ss_pred HHHHHHHHHHh--CCcEEEEeCCchhhh--HHHHhccCCCCeeeccHHHHHHHHHh
Q 026201 154 LRRKRVFLEKA--GARCIVMPCHLSHIW--HDEVCKGCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 154 l~~~~~~Le~~--Gad~IvIaCNTAH~~--~d~l~~~~~vPil~Iid~t~~~i~~~ 205 (241)
+.+.++.|.+. |||.|++.|--...+ .+++++.+++|+|+-...++.++.+.
T Consensus 158 ~~~~~~~l~~~~~gadaIvLgCT~l~~~~~~~~l~~~~g~PVids~~~~a~~~l~~ 213 (223)
T 2dgd_A 158 IYRLVKRHLNEVLKADAVYIACTALSTYEAVQYLHEDLDMPVVSENAAAMWEALNK 213 (223)
T ss_dssp HHHHHHTTHHHHTTSSEEEECCTTSCCTTHHHHHHHHHTSCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccCCCCEEEEeCCcccHHHHHHHHHHHhCCCEEEhHHHHHHHHHHH
Confidence 34445566677 999999999888764 68898888999999999988776653
No 39
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=94.67 E-value=0.56 Score=39.65 Aligned_cols=124 Identities=10% Similarity=0.015 Sum_probs=65.0
Q ss_pred hccCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHH
Q 026201 77 LNQANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVEN 153 (241)
Q Consensus 77 ~~~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~ 153 (241)
|++.++||++--.. +-.||..+.+...+. ....++++.+. ..+.+...
T Consensus 1 ~s~~~~I~~i~~~~---~~~~~~~~~~gi~~~a~~~g~~~~~~~~~------------------------~~~~~~~~-- 51 (305)
T 3g1w_A 1 MSLNETYMMITFQS---GMDYWKRCLKGFEDAAQALNVTVEYRGAA------------------------QYDIQEQI-- 51 (305)
T ss_dssp ----CEEEEEESST---TSTHHHHHHHHHHHHHHHHTCEEEEEECS------------------------SSCHHHHH--
T ss_pred CCCCceEEEEEccC---CChHHHHHHHHHHHHHHHcCCEEEEeCCC------------------------cCCHHHHH--
Confidence 45678999987332 225666666665532 34455552211 11222222
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhh---hHHHHhccCCCCeeec--------------------cHHHHHHHHHh--cCC
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHI---WHDEVCKGCSVPFLHV--------------------SECVAKELKEA--NMK 208 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~---~~d~l~~~~~vPil~I--------------------id~t~~~i~~~--~~k 208 (241)
+.++.|...++|.|++....... .++++++ .++|++-+ ...+++++.+. |.+
T Consensus 52 --~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~g~~ 128 (305)
T 3g1w_A 52 --TVLEQAIAKNPAGIAISAIDPVELTDTINKAVD-AGIPIVLFDSGAPDSHAHSFLGTNNYNAGMNAAYKMAELLDGEG 128 (305)
T ss_dssp --HHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHH-TTCCEEEESSCCTTSCCSCEEECCHHHHHHHHHHHHHHHTTTCE
T ss_pred --HHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHH-CCCcEEEECCCCCCCceeEEECcCHHHHHHHHHHHHHHHhCCCc
Confidence 23356777899988876544332 3344433 35555533 23456677776 554
Q ss_pred CCCCCCCCEEEEEecHHH----HhhhhHHHHHHhcC
Q 026201 209 PLEAGSPLRIGVLAKNAI----LTAGFYQEKLQHED 240 (241)
Q Consensus 209 ~~~~~~~~rVGLLaT~~T----~~s~~Y~~~L~~~G 240 (241)
||++++.+.. .+..-|++.++++|
T Consensus 129 --------~i~~i~~~~~~~~~~R~~gf~~~l~~~~ 156 (305)
T 3g1w_A 129 --------EVAVITLPNQLNHQERTTGFKETLEAEF 156 (305)
T ss_dssp --------EEEEEECTTCHHHHHHHHHHHHHHHHHC
T ss_pred --------EEEEEeCCCcccHHHHHHHHHHHHHhhC
Confidence 9999985532 12233677776654
No 40
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=94.64 E-value=0.84 Score=37.95 Aligned_cols=121 Identities=7% Similarity=0.084 Sum_probs=65.7
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+.++||++=.- .+-.||..+.+...+. ....++++... .+.+...
T Consensus 7 ~~~~Ig~i~~~---~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~-------------------------~~~~~~~---- 54 (277)
T 3e61_A 7 KSKLIGLLLPD---MSNPFFTLIARGVEDVALAHGYQVLIGNSD-------------------------NDIKKAQ---- 54 (277)
T ss_dssp ---CEEEEESC---TTSHHHHHHHHHHHHHHHHTTCCEEEEECT-------------------------TCHHHHH----
T ss_pred CCCEEEEEECC---CCCHHHHHHHHHHHHHHHHCCCEEEEEeCC-------------------------CCHHHHH----
Confidence 35689998532 2336777777666542 45556664411 1222222
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhHH-HHhccCCCCeeec-----------------cHHHHHHHHHhcCCCCCCCCCCE
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWHD-EVCKGCSVPFLHV-----------------SECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~d-~l~~~~~vPil~I-----------------id~t~~~i~~~~~k~~~~~~~~r 217 (241)
+.++.|...++|.|++...+ ...++ .+++ .++|+|-+ ...+++++.+.|.+ +
T Consensus 55 ~~~~~l~~~~~dgiIi~~~~-~~~~~~~l~~-~~iPvV~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~--------~ 124 (277)
T 3e61_A 55 GYLATFVSHNCTGMISTAFN-ENIIENTLTD-HHIPFVFIDRINNEHNGISTNHFKGGQLQAEVVRKGKGK--------N 124 (277)
T ss_dssp HHHHHHHHTTCSEEEECGGG-HHHHHHHHHH-C-CCEEEGGGCC---------HHHHHHHHHHHHHHTTCC--------S
T ss_pred HHHHHHHhCCCCEEEEecCC-hHHHHHHHHc-CCCCEEEEeccCCCCCeEEechHHHHHHHHHHHHHCCCC--------e
Confidence 23456778899998887633 23345 5554 37888765 23456667776654 8
Q ss_pred EEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 218 IGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 218 VGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
|++++.+. ..+..-|.+.++++|+
T Consensus 125 i~~i~~~~~~~~~~~R~~gf~~~l~~~~~ 153 (277)
T 3e61_A 125 VLIVHENLLIDAFHQRVQGIKYILDQQRI 153 (277)
T ss_dssp EEEEESCTTSHHHHHHHHHHHHHHHC---
T ss_pred EEEEeCCCCCccHHHHHHHHHHHHHHcCC
Confidence 99997432 1223347777777663
No 41
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=94.62 E-value=0.67 Score=38.73 Aligned_cols=121 Identities=12% Similarity=0.067 Sum_probs=67.7
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRR 156 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~ 156 (241)
.++||++=.-- +-.||..+.+...+. ....+++++.. .+.+... +
T Consensus 15 ~~~Igvi~~~~---~~~~~~~~~~gi~~~a~~~g~~~~~~~~~-------------------------~~~~~~~----~ 62 (298)
T 3tb6_A 15 NKTIGVLTTYI---SDYIFPSIIRGIESYLSEQGYSMLLTSTN-------------------------NNPDNER----R 62 (298)
T ss_dssp CCEEEEEESCS---SSTTHHHHHHHHHHHHHHTTCEEEEEECT-------------------------TCHHHHH----H
T ss_pred CceEEEEeCCC---CchHHHHHHHHHHHHHHHCCCEEEEEeCC-------------------------CChHHHH----H
Confidence 37899985321 224666666665532 45556665411 1222222 3
Q ss_pred HHHHHHHhCCcEEEEeCCch-----h-hhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCC
Q 026201 157 KRVFLEKAGARCIVMPCHLS-----H-IWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLE 211 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTA-----H-~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~ 211 (241)
.++.|...++|.|++..... + ..++++++ .++|++-+ ...+++++.+.|.+
T Consensus 63 ~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~--- 138 (298)
T 3tb6_A 63 GLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEK-NGIPFAMINASYAELAAPSFTLDDVKGGMMAAEHLLSLGHT--- 138 (298)
T ss_dssp HHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHH-TTCCEEEESSCCTTCSSCEEEECHHHHHHHHHHHHHHTTCC---
T ss_pred HHHHHHHCCCCEEEEecccccccCCcHHHHHHHHh-cCCCEEEEecCcCCCCCCEEEeCcHHHHHHHHHHHHHCCCC---
Confidence 34567788999888754322 1 34455543 36666543 23466777777655
Q ss_pred CCCCCEEEEEecHHH----HhhhhHHHHHHhcCC
Q 026201 212 AGSPLRIGVLAKNAI----LTAGFYQEKLQHEDC 241 (241)
Q Consensus 212 ~~~~~rVGLLaT~~T----~~s~~Y~~~L~~~G~ 241 (241)
+|++++.+.. .+..-|.+.++++|+
T Consensus 139 -----~i~~i~~~~~~~~~~R~~gf~~~l~~~g~ 167 (298)
T 3tb6_A 139 -----HMMGIFKADDTQGVKRMNGFIQAHREREL 167 (298)
T ss_dssp -----SEEEEEESSSHHHHHHHHHHHHHHHHTTC
T ss_pred -----cEEEEcCCCCccHHHHHHHHHHHHHHcCC
Confidence 8999874322 233347778877763
No 42
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=94.55 E-value=0.06 Score=45.25 Aligned_cols=56 Identities=11% Similarity=0.049 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEeCCchh--hhHHHHhccCCCCeeeccHHHHHHHHHh
Q 026201 150 IVENLRRKRVFLEKAGARCIVMPCHLSH--IWHDEVCKGCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 150 i~~~l~~~~~~Le~~Gad~IvIaCNTAH--~~~d~l~~~~~vPil~Iid~t~~~i~~~ 205 (241)
..+.+.+.++.|.+.|+|.|++.|--.. .+.+++++.+++|+|+-.+.+++.+.+.
T Consensus 159 ~~~~l~~~~~~l~~~~~d~IvLgCT~~~t~~~~~~i~~~~~vpvids~~~~a~~~~~~ 216 (228)
T 2eq5_A 159 GRREVINAAKRLKEKGVEVIALGCTGMSTIGIAPVLEEEVGIPVIDPVIASGAVALHA 216 (228)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCTHHHHHTCHHHHHHHHSSCEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCCcchHHHHHHHHHHcCCCEEchHHHHHHHHHHH
Confidence 4455666777777789999999998887 6779998888999999999888877663
No 43
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=94.43 E-value=0.043 Score=49.35 Aligned_cols=105 Identities=14% Similarity=0.164 Sum_probs=68.1
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
.|+.|-+||-.-....++.++|.....+....+++|.-..+ ..+..-++.+.+.++
T Consensus 119 ~k~cgH~~gk~L~p~~~~~~~I~Aa~~a~~~~~~~i~aRtd------------------------a~~~~gl~~ai~ra~ 174 (295)
T 1xg4_A 119 AKRSGHRPNKAIVSKEEMVDRIRAAVDAKTDPDFVIMARTD------------------------ALAVEGLDAAIERAQ 174 (295)
T ss_dssp SCCCTTSSSCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEEC------------------------CHHHHCHHHHHHHHH
T ss_pred CcccCCCCCCccCCHHHHHHHHHHHHHhccCCCcEEEEecH------------------------HhhhcCHHHHHHHHH
Confidence 35555566655666778888888888765333444422110 001000122334556
Q ss_pred HHHHhCCcEEEEeCCchhhhHHHHhccCCCCee-eccH------HHHHHHHHhcCC
Q 026201 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL-HVSE------CVAKELKEANMK 208 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil-~Iid------~t~~~i~~~~~k 208 (241)
.++++|||+|++.|-+.-..+.++.+.+++|++ |+.+ .+.+++.+.|.+
T Consensus 175 ay~eAGAd~i~~e~~~~~~~~~~i~~~~~iP~~~N~~~~g~~p~~~~~eL~~~G~~ 230 (295)
T 1xg4_A 175 AYVEAGAEMLFPEAITELAMYRQFADAVQVPILANITEFGATPLFTTDELRSAHVA 230 (295)
T ss_dssp HHHHTTCSEEEETTCCSHHHHHHHHHHHCSCBEEECCSSSSSCCCCHHHHHHTTCS
T ss_pred HHHHcCCCEEEEeCCCCHHHHHHHHHHcCCCEEEEecccCCCCCCCHHHHHHcCCC
Confidence 789999999999997654567888888899975 6663 367899999875
No 44
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=94.38 E-value=0.43 Score=40.43 Aligned_cols=75 Identities=13% Similarity=0.055 Sum_probs=44.6
Q ss_pred HHHHHHhCCcEEEEeCC-chhhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCCCE
Q 026201 158 RVFLEKAGARCIVMPCH-LSHIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCN-TAH~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~~r 217 (241)
++.|...++|.|++... .....++++.+ .++|+|-+ ...+++++.+.|.+ |
T Consensus 65 ~~~l~~~~vdgiIi~~~~~~~~~~~~l~~-~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~--------~ 135 (289)
T 2fep_A 65 LNTMLGKQVDGIVFMGGNITDEHVAEFKR-SPVPIVLAASVEEQEETPSVAIDYEQAIYDAVKLLVDKGHT--------D 135 (289)
T ss_dssp HHHHHHTTCSEEEECCSCCCHHHHHHHHH-SSSCEEEESCCCTTCCSCEEECCHHHHHHHHHHHHHHTTCS--------S
T ss_pred HHHHHhCCCCEEEEecCCCCHHHHHHHHh-cCCCEEEEccccCCCCCCEEEECcHHHHHHHHHHHHHCCCC--------e
Confidence 35677889998887543 22334555542 35565433 23356667766654 9
Q ss_pred EEEEecHH----HH--hhhhHHHHHHhcCC
Q 026201 218 IGVLAKNA----IL--TAGFYQEKLQHEDC 241 (241)
Q Consensus 218 VGLLaT~~----T~--~s~~Y~~~L~~~G~ 241 (241)
|++++.+. +. +..-|++.++++|+
T Consensus 136 I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~ 165 (289)
T 2fep_A 136 IAFVSGPMAEPINRSKKLQGYKRALEEANL 165 (289)
T ss_dssp EEEEESCTTSHHHHTTHHHHHHHHHHHTTC
T ss_pred EEEEeCCccccccHHHHHHHHHHHHHHcCC
Confidence 99997643 21 22347788887764
No 45
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=94.34 E-value=0.69 Score=39.21 Aligned_cols=125 Identities=10% Similarity=0.079 Sum_probs=70.9
Q ss_pred cCCeEEEEeCCC--hHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHH
Q 026201 79 QANTVGIVGGAS--VDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVEN 153 (241)
Q Consensus 79 ~~k~IGIIGGmG--p~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~ 153 (241)
+.++||||=... +..+-.||..+.+...+. ....+++++.. .+.+.
T Consensus 6 ~s~~Igvi~~~~~~~~~~~~f~~~~~~gi~~~a~~~g~~~~~~~~~-------------------------~~~~~---- 56 (295)
T 3hcw_A 6 QTYKIGLVLKGSEEPIRLNPFYINVLLGISETCNQHGYGTQTTVSN-------------------------NMNDL---- 56 (295)
T ss_dssp CSCEEEEECSCCCHHHHSCHHHHHHHHHHHHHHHTTTCEEEECCCC-------------------------SHHHH----
T ss_pred CCcEEEEEeecCCcccccChHHHHHHHHHHHHHHHCCCEEEEEcCC-------------------------CChHH----
Confidence 457899994222 444556888887777643 44555554411 01111
Q ss_pred HHHHHHHHHHhCCcEEEEeCCc-hhhhHHHHhccCCCCeeec---------------------cHHHHHHHHHhcCCCCC
Q 026201 154 LRRKRVFLEKAGARCIVMPCHL-SHIWHDEVCKGCSVPFLHV---------------------SECVAKELKEANMKPLE 211 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNT-AH~~~d~l~~~~~vPil~I---------------------id~t~~~i~~~~~k~~~ 211 (241)
-.+.++.|...++|.|++.... .....+.+++ .++|+|-+ ...+++++.+.|.+
T Consensus 57 ~~~~~~~l~~~~vdGiI~~~~~~~~~~~~~l~~-~~iPvV~i~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~--- 132 (295)
T 3hcw_A 57 MDEVYKMIKQRMVDAFILLYSKENDPIKQMLID-ESMPFIVIGKPTSDIDHQFTHIDNDNILASENLTRHVIEQGVD--- 132 (295)
T ss_dssp HHHHHHHHHTTCCSEEEESCCCTTCHHHHHHHH-TTCCEEEESCCCSSGGGGSCEEEECHHHHHHHHHHHHHHHCCS---
T ss_pred HHHHHHHHHhCCcCEEEEcCcccChHHHHHHHh-CCCCEEEECCCCccccCCceEEecCcHHHHHHHHHHHHHcCCc---
Confidence 1233456778899988775432 2234455543 24444322 23466777777765
Q ss_pred CCCCCEEEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 212 AGSPLRIGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 212 ~~~~~rVGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
|||+++.+. ..+..-|.+.++++|+
T Consensus 133 -----~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~ 162 (295)
T 3hcw_A 133 -----ELIFITEKGNFEVSKDRIQGFETVASQFNL 162 (295)
T ss_dssp -----EEEEEEESSCCHHHHHHHHHHHHHHHHTTC
T ss_pred -----cEEEEcCCccchhHHHHHHHHHHHHHHcCC
Confidence 999997532 2233448888888774
No 46
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=94.34 E-value=0.63 Score=40.39 Aligned_cols=76 Identities=9% Similarity=0.101 Sum_probs=46.0
Q ss_pred HHHHHHhCCcEEEEeCCch-hhhHHHHhccCCCCeeec--------------------cHHHHHHHHHhcCCCCCCCCCC
Q 026201 158 RVFLEKAGARCIVMPCHLS-HIWHDEVCKGCSVPFLHV--------------------SECVAKELKEANMKPLEAGSPL 216 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTA-H~~~d~l~~~~~vPil~I--------------------id~t~~~i~~~~~k~~~~~~~~ 216 (241)
++.|...++|.|++..... ....+.+++..++|++-+ ...+++++.+.|.+
T Consensus 107 ~~~l~~~~vdgiI~~~~~~~~~~~~~l~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~-------- 178 (340)
T 1qpz_A 107 LSMMAQKRVDGLLVMCSEYPEPLLAMLEEYRHIPMVVMDWGEAKADFTDAVIDNAFEGGYMAGRYLIERGHR-------- 178 (340)
T ss_dssp HHHHHHTTCSEEEECCSCCCHHHHHHHHTTTTSCEEEEEESSCCCSSSEEEECCHHHHHHHHHHHHHHHTCC--------
T ss_pred HHHHHcCCCCEEEEeCCCCChHHHHHHHhhCCCCEEEEecccCCCCCCCEEEECHHHHHHHHHHHHHHCCCC--------
Confidence 4567788999888854432 334555654345665432 23456667777655
Q ss_pred EEEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 217 RIGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 217 rVGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
||++++.+. ..+..-|.+.++++|+
T Consensus 179 ~I~~i~g~~~~~~~~~R~~Gf~~al~~~g~ 208 (340)
T 1qpz_A 179 EIGVIPGPLERNTGAGRLAGFMKAMEEAMI 208 (340)
T ss_dssp CEEEECCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEEeCCCccccHHHHHHHHHHHHHHCCC
Confidence 999997531 1223347888887764
No 47
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=94.30 E-value=0.43 Score=42.28 Aligned_cols=75 Identities=9% Similarity=0.163 Sum_probs=49.4
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccC--CCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHH
Q 026201 149 LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGC--SVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAI 226 (241)
Q Consensus 149 ~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~--~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T 226 (241)
...+.+.+.++.|. |+|.||+.|-=.-...+++++.. ++|+|+=.+++++++++.- .........++-++.|...
T Consensus 182 ~~~~~~~~~l~~l~--g~D~iILGCTh~PlL~~~i~~~~~~~v~lIDs~~~~A~~~~~~l-~~~~~~~~~~~~~~~t~~~ 258 (274)
T 3uhf_A 182 FLQSAMEYYFKNIT--TPDALILACTHFPLLGRSLSKYFGDKTKLIHSGDAIVEFLKERE-NIDLKNHKAKLHFYASSDV 258 (274)
T ss_dssp HHHHHHHHHHTTCC--CCSEEEECSTTGGGGHHHHHHHHCTTCEEEEHHHHHHHHHHHHS-CCCCCSSCCEEEEEESSCH
T ss_pred HHHHHHHHHHHHhc--CCCEEEECCCChHHHHHHHHHHcCCCCEEEcCHHHHHHHHHHHH-HhcccCCCCcEEEEECCCH
Confidence 34445555555554 99999999984444568888764 7999999999999988752 1111122345667776543
No 48
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=94.30 E-value=0.52 Score=40.18 Aligned_cols=121 Identities=12% Similarity=0.090 Sum_probs=69.1
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+.++||++=.- .+-.||..+.+...+. ....+++++.. .+.+.. .
T Consensus 14 ~s~~Igvi~~~---~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~-------------------------~~~~~~----~ 61 (303)
T 3kke_A 14 RSGTIGLIVPD---VNNAVFADMFSGVQMAASGHSTDVLLGQID-------------------------APPRGT----Q 61 (303)
T ss_dssp ---CEEEEESC---TTSTTHHHHHHHHHHHHHHTTCCEEEEECC-------------------------STTHHH----H
T ss_pred CCCEEEEEeCC---CcChHHHHHHHHHHHHHHHCCCEEEEEeCC-------------------------CChHHH----H
Confidence 35789988532 2234666666666542 45556665411 011111 2
Q ss_pred HHHHHHHHhCCcEEEEeCC-chhh-hHHHHhccCCCCeeec------------------cHHHHHHHHHhcCCCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCH-LSHI-WHDEVCKGCSVPFLHV------------------SECVAKELKEANMKPLEAGSP 215 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCN-TAH~-~~d~l~~~~~vPil~I------------------id~t~~~i~~~~~k~~~~~~~ 215 (241)
+.++.|...++|.|++... .... .++.+.+ ++|+|-+ ...+++++.+.|.+
T Consensus 62 ~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~--~iPvV~i~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~------- 132 (303)
T 3kke_A 62 QLSRLVSEGRVDGVLLQRREDFDDDMLAAVLE--GVPAVTINSRVPGRVGSVILDDQKGGGIATEHLITLGHS------- 132 (303)
T ss_dssp HHHHHHHSCSSSEEEECCCTTCCHHHHHHHHT--TSCEEEESCCCTTCCCEEEECHHHHHHHHHHHHHHTTCC-------
T ss_pred HHHHHHHhCCCcEEEEecCCCCcHHHHHHHhC--CCCEEEECCcCCCCCCEEEECcHHHHHHHHHHHHHCCCC-------
Confidence 2345678889998777543 3334 5677776 7777654 23456777777655
Q ss_pred CEEEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 216 LRIGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 216 ~rVGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
||++++.+. ..+..-|.+.++++|+
T Consensus 133 -~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~ 162 (303)
T 3kke_A 133 -RIAFISGTAIHDTAQRRKEGYLETLASAGL 162 (303)
T ss_dssp -SEEEEESCSSCHHHHHHHHHHHHHHHHTTC
T ss_pred -eEEEEeCCCcCccHHHHHHHHHHHHHHcCC
Confidence 999997532 2233447888887764
No 49
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=94.21 E-value=0.027 Score=48.79 Aligned_cols=106 Identities=10% Similarity=0.143 Sum_probs=65.4
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
..++|||||--+...+ .+|++..+. . ...++....+.+-+.+.. ...+.+...+.+.+.+
T Consensus 105 ~~~rigVlaT~~T~~~-~~y~~~l~~---~-g~~v~~~~~~~~v~~ie~---------------g~~~~~~~~~~l~~~~ 164 (254)
T 1b73_A 105 RNKKIGVIGTPATVKS-GAYQRKLEE---G-GADVFAKACPLFAPLAEE---------------GLLEGEITRKVVEHYL 164 (254)
T ss_dssp SSCEEEEEECHHHHHH-CHHHHHHHT---T-SCEEEEEECCCCTTTSCG---------------GGGSGGGHHHHHHHHS
T ss_pred CCCEEEEEEChHHhhh-HHHHHHHHc---C-CCEEEecCCHHHHHHHHC---------------CCCCCHHHHHHHHHHH
Confidence 4679999965444433 477777662 1 223333233332111110 1111133445566666
Q ss_pred HHHHHhCCcEEEEeCCchhhhHHHHhccC-CCCeeeccHHHHHHHHHh
Q 026201 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGC-SVPFLHVSECVAKELKEA 205 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~~d~l~~~~-~vPil~Iid~t~~~i~~~ 205 (241)
+.|.+. +|.||+.|--.-.+.+++++.+ ++|+|+-.+++++.+.+.
T Consensus 165 ~~l~~~-~d~IILGCT~~p~l~~~i~~~~~~vpviDs~~~~a~~~~~~ 211 (254)
T 1b73_A 165 KEFKGK-IDTLILGCTHYPLLKKEIKKFLGDAEVVDSSEALSLSLHNF 211 (254)
T ss_dssp TTTTTT-CSEEEECCCCTTCCHHHHHHHSCSCEEECHHHHHHHTTTTT
T ss_pred HHHHhc-CCEEEECccChHHHHHHHHHHcCCCeEECCHHHHHHHHHHH
Confidence 666666 9999999987777789999877 899999888888877653
No 50
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=94.16 E-value=0.67 Score=38.69 Aligned_cols=76 Identities=20% Similarity=0.187 Sum_probs=44.8
Q ss_pred HHHHHHhCCcEEEEeCCc-hhhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCCCE
Q 026201 158 RVFLEKAGARCIVMPCHL-SHIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNT-AH~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~~r 217 (241)
++.|...++|.|++.... ....++.+++..++|++-+ ...+++++.+.|.+ +
T Consensus 70 ~~~l~~~~vdgii~~~~~~~~~~~~~l~~~~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~l~~~G~~--------~ 141 (296)
T 3brq_A 70 IQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQ--------E 141 (296)
T ss_dssp HHHHHHTTCSEEEEECSSSCHHHHHHHHHTCSSCEEEESCCCSSSGGGEECCCHHHHHHHHHHHHHHTTCC--------S
T ss_pred HHHHHhcCCCEEEEecCCCChHHHHHHHhcCCCCEEEEccccCCCCCCEEEEchHHHHHHHHHHHHHCCCc--------e
Confidence 355667899988775432 2344566654246676543 12345666666544 9
Q ss_pred EEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 218 IGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 218 VGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
|++++.+. .-+..-|.+.++++|+
T Consensus 142 I~~i~~~~~~~~~~~R~~gf~~~l~~~g~ 170 (296)
T 3brq_A 142 IAFLTGSMDSPTSIERLAGYKDALAQHGI 170 (296)
T ss_dssp EEEECCCTTCHHHHHHHHHHHHHHHTTTC
T ss_pred EEEEcCCCCCccHHHHHHHHHHHHHHcCC
Confidence 99997542 1223347788877764
No 51
>2xed_A Putative maleate isomerase; nicotinic acid catabolism, cofactor-independent CIS-trans isomerase; 1.95A {Nocardia farcinica} PDB: 2xec_A
Probab=94.07 E-value=0.15 Score=44.76 Aligned_cols=52 Identities=10% Similarity=0.097 Sum_probs=42.1
Q ss_pred HHHHHHHHHHhCCcEEEEe-CCchhhh--HHHHhccCCCCeeeccHHHHHHHHHh
Q 026201 154 LRRKRVFLEKAGARCIVMP-CHLSHIW--HDEVCKGCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIa-CNTAH~~--~d~l~~~~~vPil~Iid~t~~~i~~~ 205 (241)
+.+.++.|...|||.|++. |--...+ .+++++.+++|+|+-..+++.++.+.
T Consensus 196 l~~~~~~l~~~gadaIvLg~CT~l~~~~~~~~le~~lg~PVids~~a~a~~~l~~ 250 (273)
T 2xed_A 196 VMAAARSLDLSEVDALVISCAVQMPSLPLVETAEREFGIPVLSAATAGAYSILRS 250 (273)
T ss_dssp HHHHHHHSCCTTCSEEEEESSSSSCCTTHHHHHHHHHSSCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCEEEEcCCCCcchHHhHHHHHHHhCCCEEcHHHHHHHHHHHH
Confidence 4445566777899999999 9888864 68899889999999999988776654
No 52
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=93.95 E-value=0.77 Score=38.73 Aligned_cols=75 Identities=16% Similarity=0.154 Sum_probs=45.0
Q ss_pred HHHHHHhCCcEEEEeCCch-hhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCCCE
Q 026201 158 RVFLEKAGARCIVMPCHLS-HIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTA-H~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~~r 217 (241)
++.|...++|.|++..... ...++.+++ .++|++-+ ...+++++.+.|.+ |
T Consensus 60 ~~~l~~~~vdgiIi~~~~~~~~~~~~l~~-~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~--------~ 130 (290)
T 2rgy_A 60 VRFLIGRDCDGVVVISHDLHDEDLDELHR-MHPKMVFLNRAFDALPDASFCPDHRRGGELAAATLIEHGHR--------K 130 (290)
T ss_dssp HHHHHHTTCSEEEECCSSSCHHHHHHHHH-HCSSEEEESSCCTTSGGGEECCCHHHHHHHHHHHHHHTTCC--------S
T ss_pred HHHHHhcCccEEEEecCCCCHHHHHHHhh-cCCCEEEEccccCCCCCCEEEeCcHHHHHHHHHHHHHCCCc--------e
Confidence 3567788999888765432 334555543 35666543 22355666666544 9
Q ss_pred EEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 218 IGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 218 VGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
||+++.+. ..+..-|++.++++|+
T Consensus 131 I~~i~~~~~~~~~~~R~~Gf~~al~~~g~ 159 (290)
T 2rgy_A 131 LAVISGPFTASDNVERLDGFFDELARHGI 159 (290)
T ss_dssp EEEEESCTTCHHHHHHHHHHHHHHHTTTC
T ss_pred EEEEeCCCCCccHHHHHHHHHHHHHHcCC
Confidence 99997542 1223347888887763
No 53
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=93.92 E-value=0.091 Score=46.97 Aligned_cols=43 Identities=28% Similarity=0.351 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 152 ~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
+.+.+.++.++++|||.|++.|-..- .+.+|.+.+++|+|+|.
T Consensus 173 ~~~i~rA~a~~eAGA~~ivlE~vp~~-~a~~It~~l~iP~igIG 215 (275)
T 3vav_A 173 AQLLRDARAVEEAGAQLIVLEAVPTL-VAAEVTRELSIPTIGIG 215 (275)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCCHH-HHHHHHHHCSSCEEEES
T ss_pred HHHHHHHHHHHHcCCCEEEecCCCHH-HHHHHHHhCCCCEEEEc
Confidence 44556678899999999999999886 88999999999999984
No 54
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=93.91 E-value=0.14 Score=46.12 Aligned_cols=105 Identities=17% Similarity=0.173 Sum_probs=68.4
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
.|+.|-++|-.-..+.++.+||.....+.+.++++|.-..+.. . .+.+-+.+. -++
T Consensus 123 ~k~cGh~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~---~--------------------~~gldeai~-Ra~ 178 (298)
T 3eoo_A 123 QKRCGHRPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAA---A--------------------AEGIDAAIE-RAI 178 (298)
T ss_dssp CCCTTCCCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTH---H--------------------HHHHHHHHH-HHH
T ss_pred CcccCCCCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhh---h--------------------hcCHHHHHH-HHH
Confidence 4556666666667788999999887765534566664422110 0 011223333 345
Q ss_pred HHHHhCCcEEEEeCCchhhhHHHHhccCCCCee-eccHH------HHHHHHHhcCC
Q 026201 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL-HVSEC------VAKELKEANMK 208 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil-~Iid~------t~~~i~~~~~k 208 (241)
..+++|||+|.++|-+.-.-+.++.+.+++|++ +|++- +.+++.+.|.+
T Consensus 179 ay~~AGAD~if~~~~~~~ee~~~~~~~~~~Pl~~n~~~~g~tp~~~~~eL~~lGv~ 234 (298)
T 3eoo_A 179 AYVEAGADMIFPEAMKTLDDYRRFKEAVKVPILANLTEFGSTPLFTLDELKGANVD 234 (298)
T ss_dssp HHHHTTCSEEEECCCCSHHHHHHHHHHHCSCBEEECCTTSSSCCCCHHHHHHTTCC
T ss_pred hhHhcCCCEEEeCCCCCHHHHHHHHHHcCCCeEEEeccCCCCCCCCHHHHHHcCCe
Confidence 567899999999998754556777778889974 66542 57899999875
No 55
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=93.78 E-value=0.18 Score=45.83 Aligned_cols=105 Identities=17% Similarity=0.119 Sum_probs=66.6
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
.|+.|-+||-.-....++.++|.....+.+..+++|.-..+. ....-++.+.+.++
T Consensus 141 ~k~cgH~~gk~L~p~~e~~~rI~Aa~~A~~~~~~~I~ARtda------------------------~a~~gl~~ai~Ra~ 196 (318)
T 1zlp_A 141 PKKCGHMRGKAVVPAEEHALKIAAAREAIGDSDFFLVARTDA------------------------RAPHGLEEGIRRAN 196 (318)
T ss_dssp SCCCSSSSCCCBCCHHHHHHHHHHHHHHHTTSCCEEEEEECT------------------------HHHHHHHHHHHHHH
T ss_pred CccccCCCCCccCCHHHHHHHHHHHHHhcccCCcEEEEeeHH------------------------hhhcCHHHHHHHHH
Confidence 345555555555566677778777776542244444331100 01111223344556
Q ss_pred HHHHhCCcEEEEeCCchhhhHHHHhccCCCCee-eccH------HHHHHHHHhcCC
Q 026201 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL-HVSE------CVAKELKEANMK 208 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil-~Iid------~t~~~i~~~~~k 208 (241)
.++++|||+|++.|-..-..+.++.+.+++|++ +|.+ .+.+++.+.|.+
T Consensus 197 Ay~eAGAd~i~~e~~~~~e~~~~i~~~l~~P~lan~~~~g~~~~~~~~eL~~lGv~ 252 (318)
T 1zlp_A 197 LYKEAGADATFVEAPANVDELKEVSAKTKGLRIANMIEGGKTPLHTPEEFKEMGFH 252 (318)
T ss_dssp HHHHTTCSEEEECCCCSHHHHHHHHHHSCSEEEEEECTTSSSCCCCHHHHHHHTCC
T ss_pred HHHHcCCCEEEEcCCCCHHHHHHHHHhcCCCEEEEeccCCCCCCCCHHHHHHcCCe
Confidence 789999999999997654667889999999975 6653 357899999875
No 56
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=93.77 E-value=1.3 Score=37.07 Aligned_cols=122 Identities=13% Similarity=0.138 Sum_probs=69.7
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+.++||++=-- .+-.||..+.+...+. ....++++... .+.+.. .
T Consensus 7 ~~~~Igvv~~~---~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~-------------------------~~~~~~----~ 54 (291)
T 3egc_A 7 RSNVVGLIVSD---IENVFFAEVASGVESEARHKGYSVLLANTA-------------------------EDIVRE----R 54 (291)
T ss_dssp CCCEEEEEESC---TTSHHHHHHHHHHHHHHHHTTCEEEEEECT-------------------------TCHHHH----H
T ss_pred CCcEEEEEECC---CcchHHHHHHHHHHHHHHHCCCEEEEEeCC-------------------------CCHHHH----H
Confidence 45789998522 2335777776666542 45556665411 112222 2
Q ss_pred HHHHHHHHhCCcEEEEeCCch-hhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLS-HIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSP 215 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTA-H~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~ 215 (241)
+.++.|...++|.|++..... ...++.+.+ .++|++-+ ...+++++.+.|.+
T Consensus 55 ~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~------- 126 (291)
T 3egc_A 55 EAVGQFFERRVDGLILAPSEGEHDYLRTELP-KTFPIVAVNRELRIPGCGAVLSENVRGARTAVEYLIARGHT------- 126 (291)
T ss_dssp HHHHHHHHTTCSEEEECCCSSCCHHHHHSSC-TTSCEEEESSCCCCTTCEEEEECHHHHHHHHHHHHHHTTCC-------
T ss_pred HHHHHHHHCCCCEEEEeCCCCChHHHHHhhc-cCCCEEEEecccCCCCCCEEEECcHHHHHHHHHHHHHcCCC-------
Confidence 334567788999887765443 333444433 36776644 23466777777655
Q ss_pred CEEEEEecHH---H--HhhhhHHHHHHhcCC
Q 026201 216 LRIGVLAKNA---I--LTAGFYQEKLQHEDC 241 (241)
Q Consensus 216 ~rVGLLaT~~---T--~~s~~Y~~~L~~~G~ 241 (241)
+|++++... + .+..-|++.++++|+
T Consensus 127 -~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~ 156 (291)
T 3egc_A 127 -RIGAIVGSAGLMTSRERLKGFRAAMSAAGL 156 (291)
T ss_dssp -SEEEECSCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred -EEEEEeCCCCCcCHHHHHHHHHHHHHHcCC
Confidence 999997543 1 223347777877663
No 57
>2jfn_A Glutamate racemase; cell WALL, isomerase, cell shape, UDP- murnac-Ala, peptidoglycan biosynthesis, peptidoglycan synthesis; HET: GLU UMA; 1.9A {Escherichia coli}
Probab=93.76 E-value=0.22 Score=43.94 Aligned_cols=109 Identities=10% Similarity=0.130 Sum_probs=64.5
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
+.++|||||--+...+ .+|++..+....+ ..+.-...|.+-+.+..... ..+.. .+.+.+.+
T Consensus 126 ~~~rIgVLaT~~T~~s-~~y~~~l~~~g~~--~~v~~~~~~~lv~~ie~~~~-----------~~~~~----~~~l~~~l 187 (285)
T 2jfn_A 126 ANGIVGLLATRGTVKR-SYTHELIARFANE--CQIEMLGSAEMVELAEAKLH-----------GEDVS----LDALKRIL 187 (285)
T ss_dssp SSSEEEEEECTTGGGC-HHHHHHHHHSCTT--SEEEEEECHHHHHHHHHHHH-----------TCCCC----HHHHHHHT
T ss_pred CCCEEEEEEcHHHHhh-HHHHHHHHHhCCC--CEEeCCCCHHHHHHHHhccc-----------CCHHH----HHHHHHHH
Confidence 4679999987666544 4566666554322 22222222222111111000 01112 23344445
Q ss_pred HHHHH--hCCcEEEEeCCchhhhHHHHhccC--CCCeeeccHHHHHHHHHh
Q 026201 159 VFLEK--AGARCIVMPCHLSHIWHDEVCKGC--SVPFLHVSECVAKELKEA 205 (241)
Q Consensus 159 ~~Le~--~Gad~IvIaCNTAH~~~d~l~~~~--~vPil~Iid~t~~~i~~~ 205 (241)
+.|.+ .|+|.||+.|--...+.+++++.+ ++|+|+-.+++++++.+.
T Consensus 188 ~~l~~~~~~~D~IVLGCTh~p~l~~~i~~~lg~~vpviDs~~a~a~~~~~~ 238 (285)
T 2jfn_A 188 RPWLRMKEPPDTVVLGCTHFPLLQEELLQVLPEGTRLVDSGAAIARRTAWL 238 (285)
T ss_dssp HHHHTCSSCCSEEEECSTTGGGGHHHHHHHSCTTCEEECSHHHHHHHHHHH
T ss_pred HHHHhcCCCCCEEEEeCCCcHHHHHHHHHhcCCCCEEECcHHHHHHHHHHH
Confidence 55654 589999999986666779999876 499999999988887653
No 58
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=93.75 E-value=1.2 Score=38.48 Aligned_cols=125 Identities=16% Similarity=0.122 Sum_probs=69.7
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+.++||++=.-. .-+-.||..+.+...+. ....+++++.. .+.+...
T Consensus 60 ~~~~Igvi~~~~-~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~-------------------------~~~~~~~---- 109 (338)
T 3dbi_A 60 STQTLGLVVTNT-LYHGIYFSELLFHAARMAEEKGRQLLLADGK-------------------------HSAEEER---- 109 (338)
T ss_dssp CCSEEEEEECTT-TTSTTHHHHHHHHHHHHHHHTTCEEEEEECT-------------------------TSHHHHH----
T ss_pred CCCEEEEEecCC-cccChhHHHHHHHHHHHHHHCCCEEEEEeCC-------------------------CChHHHH----
Confidence 357899985321 12235677776666542 45556655411 1112222
Q ss_pred HHHHHHHHhCCcEEEEeCCch-hhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLS-HIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSP 215 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTA-H~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~ 215 (241)
+.++.|...++|.|++..... ...+.++.+..++|++-+ ...+++++.+.|.+
T Consensus 110 ~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~------- 182 (338)
T 3dbi_A 110 QAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRRLRKNSSHSVWCDHKQTSFNAVAELINAGHQ------- 182 (338)
T ss_dssp HHHHHHHHTTCSEEEECCSSSCHHHHHHHHHHCSSCEEEESSCCSSSGGGEECBCHHHHHHHHHHHHHHTTCC-------
T ss_pred HHHHHHHhCCCCEEEEeCCCCChHHHHHHHHcCCCCEEEEcCCCCCCCCCEEEEChHHHHHHHHHHHHHCCCC-------
Confidence 234567788999888865432 222333444456665543 22456677777655
Q ss_pred CEEEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 216 LRIGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 216 ~rVGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
+||+++.+. ..+..-|.+.++++|+
T Consensus 183 -~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~ 212 (338)
T 3dbi_A 183 -EIAFLTGSMDSPTSIERLAGYKDALAQHGI 212 (338)
T ss_dssp -SEEEECCCTTCHHHHHHHHHHHHHHHHTTC
T ss_pred -EEEEEeCCCCCccHHHHHHHHHHHHHHCCC
Confidence 999996531 1233448888888764
No 59
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=93.66 E-value=2.7 Score=36.07 Aligned_cols=77 Identities=9% Similarity=0.016 Sum_probs=48.2
Q ss_pred HHHHHHHhCCcEEEEeCCchhhh-HHHHhccCCCCeeec-------------------------cHHHHHHHHHh-cCCC
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIW-HDEVCKGCSVPFLHV-------------------------SECVAKELKEA-NMKP 209 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~I-------------------------id~t~~~i~~~-~~k~ 209 (241)
.++.|...+++.|+.|..+.... ...+.+..++|+|.. ....++++.+. +.+
T Consensus 61 ~~~~l~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~- 139 (356)
T 3ipc_A 61 VANKFVADGVKFVVGHANSGVSIPASEVYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFKDA- 139 (356)
T ss_dssp HHHHHHHTTCCEEEECSSHHHHHHHHHHHHTTTCEEEESSCCCGGGGSSCCTTEEESSCCHHHHHHHHHHHHHHHCTTC-
T ss_pred HHHHHHHCCCcEEEcCCCcHHHHHHHHHHHhCCCeEEecCCCCcHhhcCCCCcEEEecCChHHHHHHHHHHHHHhcCCC-
Confidence 33456668999999887665543 344555667887762 12344556555 544
Q ss_pred CCCCCCCEEEEEecHHH---HhhhhHHHHHHhcCC
Q 026201 210 LEAGSPLRIGVLAKNAI---LTAGFYQEKLQHEDC 241 (241)
Q Consensus 210 ~~~~~~~rVGLLaT~~T---~~s~~Y~~~L~~~G~ 241 (241)
||++++.+.. -...-|++.+++.|+
T Consensus 140 -------~iaii~~~~~~~~~~~~~~~~~l~~~g~ 167 (356)
T 3ipc_A 140 -------KVAIIHDKTPYGQGLADETKKAANAAGV 167 (356)
T ss_dssp -------CEEEEECSSHHHHHHHHHHHHHHHHTTC
T ss_pred -------EEEEEeCCChHHHHHHHHHHHHHHHcCC
Confidence 9999987432 234457888887764
No 60
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=93.66 E-value=3 Score=36.06 Aligned_cols=75 Identities=12% Similarity=0.119 Sum_probs=43.7
Q ss_pred HHHHHh-CCcEEEEeCCchhhh-HHHHhccCCCCeeecc------------------------HHHHHHHHHh-cCCCCC
Q 026201 159 VFLEKA-GARCIVMPCHLSHIW-HDEVCKGCSVPFLHVS------------------------ECVAKELKEA-NMKPLE 211 (241)
Q Consensus 159 ~~Le~~-Gad~IvIaCNTAH~~-~d~l~~~~~vPil~Ii------------------------d~t~~~i~~~-~~k~~~ 211 (241)
+.|... +++.|+-|..+.... ...+.+..++|+|... ...++.+.+. +.
T Consensus 74 ~~l~~~~~v~~iiG~~~s~~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~g~---- 149 (366)
T 3td9_A 74 ARAIDKEKVLAIIGEVASAHSLAIAPIAEENKVPMVTPASTNPLVTQGRKFVSRVCFIDPFQGAAMAVFAYKNLGA---- 149 (366)
T ss_dssp HHHHHTSCCSEEEECSSHHHHHHHHHHHHHTTCCEEESSCCCGGGTTTCSSEEESSCCHHHHHHHHHHHHHHTSCC----
T ss_pred HHHhccCCeEEEEccCCchhHHHHHHHHHhCCCeEEecCCCCccccCCCCCEEEEeCCcHHHHHHHHHHHHHhcCC----
Confidence 445555 599999876655432 3444455678877642 1234445443 43
Q ss_pred CCCCCEEEEEe---cHHHH-hhhhHHHHHHhcCC
Q 026201 212 AGSPLRIGVLA---KNAIL-TAGFYQEKLQHEDC 241 (241)
Q Consensus 212 ~~~~~rVGLLa---T~~T~-~s~~Y~~~L~~~G~ 241 (241)
+||+++. ++... ....|++.+++.|+
T Consensus 150 ----~~iaii~~~~~~~~~~~~~~~~~~~~~~G~ 179 (366)
T 3td9_A 150 ----KRVVVFTDVEQDYSVGLSNFFINKFTELGG 179 (366)
T ss_dssp ----CEEEEEEETTCHHHHHHHHHHHHHHHHTTC
T ss_pred ----cEEEEEEeCCCcHHHHHHHHHHHHHHHCCC
Confidence 4999994 23222 23557888888774
No 61
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=93.66 E-value=0.31 Score=41.32 Aligned_cols=119 Identities=13% Similarity=0.123 Sum_probs=69.4
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+.++||++=. .+-.||..+.+...+. ....+++++... + . +. .
T Consensus 11 ~~~~Igvi~~----~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~----------~------------~-~~-------~ 56 (289)
T 3k9c_A 11 SSRLLGVVFE----LQQPFHGDLVEQIYAAATRRGYDVMLSAVAP----------S------------R-AE-------K 56 (289)
T ss_dssp --CEEEEEEE----TTCHHHHHHHHHHHHHHHHTTCEEEEEEEBT----------T------------B-CH-------H
T ss_pred CCCEEEEEEe----cCCchHHHHHHHHHHHHHHCCCEEEEEeCCC----------C------------H-HH-------H
Confidence 3578999962 2446777777776643 455566554110 0 0 00 1
Q ss_pred HHHHHHHHhCCcEEEEeC-CchhhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMPC-HLSHIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSP 215 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaC-NTAH~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~ 215 (241)
+.++.|...++|.|++.. +.....++.+.+ ++|+|-+ ...+++++.+.|.+
T Consensus 57 ~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~--~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~------- 127 (289)
T 3k9c_A 57 VAVQALMRERCEAAILLGTRFDTDELGALAD--RVPALVVARASGLPGVGAVRGDDVAGITLAVDHLTELGHR------- 127 (289)
T ss_dssp HHHHHHTTTTEEEEEEETCCCCHHHHHHHHT--TSCEEEESSCCSSTTSEEEEECHHHHHHHHHHHHHHTTCC-------
T ss_pred HHHHHHHhCCCCEEEEECCCCCHHHHHHHHc--CCCEEEEcCCCCCCCCCEEEeChHHHHHHHHHHHHHCCCC-------
Confidence 223456778999777664 444445566654 6777654 22456777777655
Q ss_pred CEEEEEecHH----HHhhhhHHHHHHhcCC
Q 026201 216 LRIGVLAKNA----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 216 ~rVGLLaT~~----T~~s~~Y~~~L~~~G~ 241 (241)
|||+++.+. ..+..-|.+.++++|+
T Consensus 128 -~I~~i~~~~~~~~~~R~~Gf~~al~~~g~ 156 (289)
T 3k9c_A 128 -NIAHIDGADAPGGADRRAGFLAAMDRHGL 156 (289)
T ss_dssp -SEEEECCTTSTTHHHHHHHHHHHHHHTTC
T ss_pred -cEEEEeCCCCccHHHHHHHHHHHHHHCCC
Confidence 999998653 2233447788877764
No 62
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=93.59 E-value=0.29 Score=42.20 Aligned_cols=51 Identities=14% Similarity=-0.011 Sum_probs=40.9
Q ss_pred HHHHHH-H-HHhCCcEEEEeCCchhhh--HHHHhccCCCCeeeccHHHHHHHHHh
Q 026201 155 RRKRVF-L-EKAGARCIVMPCHLSHIW--HDEVCKGCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 155 ~~~~~~-L-e~~Gad~IvIaCNTAH~~--~d~l~~~~~vPil~Iid~t~~~i~~~ 205 (241)
.+.++. | ...|||.|++.|--...+ .+++++.+++|+++...+++.++.+.
T Consensus 168 ~~~~~~~l~~~~~adaivL~CT~l~~l~~i~~le~~lg~PVids~~a~~w~~lr~ 222 (240)
T 3ixl_A 168 VDLCVRAFEAAPDSDGILLSSGGLLTLDAIPEVERRLGVPVVSSSPAGFWDAVRL 222 (240)
T ss_dssp HHHHHHHHHTSTTCSEEEEECTTSCCTTHHHHHHHHHSSCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCCCEEEEeCCCCchhhhHHHHHHHhCCCEEeHHHHHHHHHHHH
Confidence 344455 6 678999999999766665 48899999999999999988877764
No 63
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=93.49 E-value=0.11 Score=46.69 Aligned_cols=52 Identities=12% Similarity=0.219 Sum_probs=42.2
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccH------HHHHHHHHhcCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE------CVAKELKEANMK 208 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid------~t~~~i~~~~~k 208 (241)
+.++.++++|||+|+++|-+.-..+.++.+.+++|++ |++ .+.+++.+.|.+
T Consensus 172 ~Ra~ay~eAGAd~i~~e~~~~~~~~~~i~~~~~~P~i-i~~~g~~~~~~~~eL~~lGv~ 229 (287)
T 3b8i_A 172 QRTLAYQEAGADGICLVGVRDFAHLEAIAEHLHIPLM-LVTYGNPQLRDDARLARLGVR 229 (287)
T ss_dssp HHHHHHHHTTCSEEEEECCCSHHHHHHHHTTCCSCEE-EECTTCGGGCCHHHHHHTTEE
T ss_pred HHHHHHHHcCCCEEEecCCCCHHHHHHHHHhCCCCEE-EeCCCCCCCCCHHHHHHcCCc
Confidence 3446789999999999997555677899999999999 753 368899998874
No 64
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=93.34 E-value=0.41 Score=39.72 Aligned_cols=75 Identities=13% Similarity=0.161 Sum_probs=42.7
Q ss_pred HHHHHHhCCcEEEEe-CCchhhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCCCE
Q 026201 158 RVFLEKAGARCIVMP-CHLSHIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 158 ~~~Le~~Gad~IvIa-CNTAH~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~~r 217 (241)
++.|...++|.|++. ++.....++.+++ .++|++-+ ...+++++.+.|.+ |
T Consensus 52 ~~~l~~~~vdgii~~~~~~~~~~~~~l~~-~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~--------~ 122 (275)
T 3d8u_A 52 LSTFLESRPAGVVLFGSEHSQRTHQLLEA-SNTPVLEIAELSSKASYLNIGVDHFEVGKACTRHLIEQGFK--------N 122 (275)
T ss_dssp HHHHHTSCCCCEEEESSCCCHHHHHHHHH-HTCCEEEESSSCSSSSSEEECBCHHHHHHHHHHHHHTTTCC--------C
T ss_pred HHHHHhcCCCEEEEeCCCCCHHHHHHHHh-CCCCEEEEeeccCCCCCCEEEEChHHHHHHHHHHHHHCCCC--------e
Confidence 345677889976664 3333344555543 35665533 22345555555543 9
Q ss_pred EEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 218 IGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 218 VGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
|++++.+. ..+..-|.+.++++|+
T Consensus 123 i~~i~~~~~~~~~~~R~~gf~~~l~~~g~ 151 (275)
T 3d8u_A 123 VGFIGARGNHSTLQRQLHGWQSAMIENYL 151 (275)
T ss_dssp EEEEECSCSSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEcCCCCCchHHHHHHHHHHHHHHcCC
Confidence 99997642 1233447788887763
No 65
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=93.21 E-value=0.86 Score=38.99 Aligned_cols=76 Identities=11% Similarity=0.101 Sum_probs=46.5
Q ss_pred HHHHHHh-CCcEEEEeCCchhhh-HHHHhccCCCCeeecc-----------------------HHHHHHHHHhcCCCCCC
Q 026201 158 RVFLEKA-GARCIVMPCHLSHIW-HDEVCKGCSVPFLHVS-----------------------ECVAKELKEANMKPLEA 212 (241)
Q Consensus 158 ~~~Le~~-Gad~IvIaCNTAH~~-~d~l~~~~~vPil~Ii-----------------------d~t~~~i~~~~~k~~~~ 212 (241)
++.|... +++.|+.+..+.... ...+.+..++|+|... ...++.+.+.|.+
T Consensus 61 ~~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---- 136 (362)
T 3snr_A 61 ARRFVTESKADVIMGSSVTPPSVAISNVANEAQIPHIALAPLPITPERAKWSVVMPQPIPIMGKVLYEHMKKNNVK---- 136 (362)
T ss_dssp HHHHHHTSCCSEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCCCTTTTTTEEECSCCHHHHHHHHHHHHHHTTCC----
T ss_pred HHHHHhccCceEEEcCCCcHHHHHHHHHHHHcCccEEEecCCccccCCCCcEEecCCChHHHHHHHHHHHHhcCCC----
Confidence 3455555 899999887665432 2233334467766532 2455666666554
Q ss_pred CCCCEEEEEecHHHH---hhhhHHHHHHhcCC
Q 026201 213 GSPLRIGVLAKNAIL---TAGFYQEKLQHEDC 241 (241)
Q Consensus 213 ~~~~rVGLLaT~~T~---~s~~Y~~~L~~~G~ 241 (241)
||+++..+... ...-|++.+++.|+
T Consensus 137 ----~ia~i~~~~~~~~~~~~~~~~~l~~~g~ 164 (362)
T 3snr_A 137 ----TVGYIGYSDSYGDLWFNDLKKQGEAMGL 164 (362)
T ss_dssp ----EEEEEEESSHHHHHHHHHHHHHHHHTTC
T ss_pred ----EEEEEecCchHHHHHHHHHHHHHHHcCC
Confidence 99999754332 34457888888774
No 66
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=93.19 E-value=0.9 Score=39.38 Aligned_cols=76 Identities=13% Similarity=0.209 Sum_probs=46.6
Q ss_pred HHHHHHHhCCcEEEEeCCchh-hhHHHHhccCCCCeeec------------------cHHHHHHHHHhcCCCCCCCCCCE
Q 026201 157 KRVFLEKAGARCIVMPCHLSH-IWHDEVCKGCSVPFLHV------------------SECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH-~~~d~l~~~~~vPil~I------------------id~t~~~i~~~~~k~~~~~~~~r 217 (241)
.++.|...++|.|++...... ...+.+++ .++|++-+ ...+++++.+.|.+ |
T Consensus 110 ~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~-~~iPvV~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~--------~ 180 (339)
T 3h5o_A 110 LLRAYLQHRPDGVLITGLSHAEPFERILSQ-HALPVVYMMDLADDGRCCVGFSQEDAGAAITRHLLSRGKR--------R 180 (339)
T ss_dssp HHHHHHTTCCSEEEEECSCCCTTHHHHHHH-TTCCEEEEESCCSSSCCEEECCHHHHHHHHHHHHHHTTCC--------S
T ss_pred HHHHHHcCCCCEEEEeCCCCCHHHHHHHhc-CCCCEEEEeecCCCCCeEEEECHHHHHHHHHHHHHHCCCC--------e
Confidence 345677889998877654332 33444443 46777654 23456777777765 9
Q ss_pred EEEEecHH--H--HhhhhHHHHHHhcCC
Q 026201 218 IGVLAKNA--I--LTAGFYQEKLQHEDC 241 (241)
Q Consensus 218 VGLLaT~~--T--~~s~~Y~~~L~~~G~ 241 (241)
||+++.+. + .+..-|.+.++++|+
T Consensus 181 I~~i~~~~~~~~~~R~~Gf~~al~~~g~ 208 (339)
T 3h5o_A 181 IGFLGAQLDERVMKRLDGYRAALDAADC 208 (339)
T ss_dssp EEEEEESCCHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCCCccHHHHHHHHHHHHHHCCC
Confidence 99997542 1 222337788877764
No 67
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=93.19 E-value=1.7 Score=37.87 Aligned_cols=76 Identities=8% Similarity=0.121 Sum_probs=46.7
Q ss_pred HHHHHHHhCCcEEEEeCCch-hhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCCC
Q 026201 157 KRVFLEKAGARCIVMPCHLS-HIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSPL 216 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTA-H~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~~ 216 (241)
.++.|...++|.|++..... ....+.+.+ .++|++-+ ...+++++.+.|.+
T Consensus 118 ~~~~l~~~~vdGiI~~~~~~~~~~~~~l~~-~~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~r-------- 188 (355)
T 3e3m_A 118 LVETMLRRRPEAMVLSYDGHTEQTIRLLQR-ASIPIVEIWEKPAHPIGHTVGFSNERAAYDMTNALLARGFR-------- 188 (355)
T ss_dssp HHHHHHHTCCSEEEEECSCCCHHHHHHHHH-CCSCEEEESSCCSSCSSEEEECCHHHHHHHHHHHHHHTTCC--------
T ss_pred HHHHHHhCCCCEEEEeCCCCCHHHHHHHHh-CCCCEEEECCccCCCCCCEEEeChHHHHHHHHHHHHHCCCC--------
Confidence 34567788999887764332 233444443 46676644 12456677777655
Q ss_pred EEEEEecH------HHHhhhhHHHHHHhcCC
Q 026201 217 RIGVLAKN------AILTAGFYQEKLQHEDC 241 (241)
Q Consensus 217 rVGLLaT~------~T~~s~~Y~~~L~~~G~ 241 (241)
|||+++.+ ...+..-|.+.++++|+
T Consensus 189 ~I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~ 219 (355)
T 3e3m_A 189 KIVFLGEKDDDWTRGAARRAGFKRAMREAGL 219 (355)
T ss_dssp SEEEEEESSCTTSHHHHHHHHHHHHHHHTTS
T ss_pred eEEEEccCcccChhHHHHHHHHHHHHHHCCc
Confidence 99999753 22344458888888774
No 68
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=93.18 E-value=0.25 Score=41.77 Aligned_cols=74 Identities=16% Similarity=0.124 Sum_probs=44.1
Q ss_pred HHHHHhCCcEEEEeCCc-hhhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCCCEE
Q 026201 159 VFLEKAGARCIVMPCHL-SHIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSPLRI 218 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNT-AH~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~~rV 218 (241)
+.|...++|.|++.... ....++.+++ .++|+|-+ ...+++++.+.|.+ ||
T Consensus 58 ~~l~~~~vdgiIi~~~~~~~~~~~~l~~-~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~--------~I 128 (287)
T 3bbl_A 58 DLIRSGNVDGFVLSSINYNDPRVQFLLK-QKFPFVAFGRSNPDWDFAWVDIDGTAGTRQAVEYLIGRGHR--------RI 128 (287)
T ss_dssp HHHHTTCCSEEEECSCCTTCHHHHHHHH-TTCCEEEESCCSTTCCCCEEEECHHHHHHHHHHHHHHHTCC--------CE
T ss_pred HHHHcCCCCEEEEeecCCCcHHHHHHHh-cCCCEEEECCcCCCCCCCEEEeccHHHHHHHHHHHHHCCCC--------eE
Confidence 45677899988775432 2334455543 35665533 23455667776655 99
Q ss_pred EEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 219 GVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 219 GLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
++++.+. ..+..-|.+.++++|+
T Consensus 129 ~~i~~~~~~~~~~~R~~Gf~~~l~~~g~ 156 (287)
T 3bbl_A 129 AILAWPEDSRVGNDRLQGYLEAMQTAQL 156 (287)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeCCcccccHHHHHHHHHHHHHHcCC
Confidence 9997542 1233447888887764
No 69
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=93.17 E-value=1.4 Score=36.86 Aligned_cols=125 Identities=11% Similarity=0.145 Sum_probs=68.7
Q ss_pred cCCeEEEEeCCChH--HHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHH
Q 026201 79 QANTVGIVGGASVD--STLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVEN 153 (241)
Q Consensus 79 ~~k~IGIIGGmGp~--AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~ 153 (241)
+.++||++=..... .+-.||..+.+...+. ....++++... .+.+.
T Consensus 7 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~-------------------------~~~~~---- 57 (292)
T 3k4h_A 7 TTKTLGLVMPSSASKAFQNPFFPEVIRGISSFAHVEGYALYMSTGE-------------------------TEEEI---- 57 (292)
T ss_dssp CCCEEEEECSSCHHHHTTSTHHHHHHHHHHHHHHHTTCEEEECCCC-------------------------SHHHH----
T ss_pred CCCEEEEEecCCccccccCHHHHHHHHHHHHHHHHcCCEEEEEeCC-------------------------CCHHH----
Confidence 46789998543110 2335777776666542 44555554311 01111
Q ss_pred HHHHHHHHHHhCCcEEEEeCCc-hhhhHHHHhccCCCCeeec--------------------cHHHHHHHHHhcCCCCCC
Q 026201 154 LRRKRVFLEKAGARCIVMPCHL-SHIWHDEVCKGCSVPFLHV--------------------SECVAKELKEANMKPLEA 212 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNT-AH~~~d~l~~~~~vPil~I--------------------id~t~~~i~~~~~k~~~~ 212 (241)
..+.++.|...++|.|++.... ....++.+.+ .++|+|-+ ...+++++.+.|.+
T Consensus 58 ~~~~~~~~~~~~vdgiIi~~~~~~~~~~~~l~~-~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~---- 132 (292)
T 3k4h_A 58 FNGVVKMVQGRQIGGIILLYSRENDRIIQYLHE-QNFPFVLIGKPYDRKDEITYVDNDNYTAAREVAEYLISLGHK---- 132 (292)
T ss_dssp HHHHHHHHHTTCCCEEEESCCBTTCHHHHHHHH-TTCCEEEESCCSSCTTTSCEEECCHHHHHHHHHHHHHHTTCC----
T ss_pred HHHHHHHHHcCCCCEEEEeCCCCChHHHHHHHH-CCCCEEEECCCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCc----
Confidence 1233456778899987775433 3344555543 25555432 23566677777655
Q ss_pred CCCCEEEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 213 GSPLRIGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 213 ~~~~rVGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
+|++++.+. ..+..-|.+.++++|+
T Consensus 133 ----~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~ 162 (292)
T 3k4h_A 133 ----QIAFIGGGSDLLVTRDRLAGMSDALKLADI 162 (292)
T ss_dssp ----CEEEEESCTTBHHHHHHHHHHHHHHHHTTC
T ss_pred ----eEEEEeCcccchhHHHHHHHHHHHHHHcCC
Confidence 999997542 1233447788877764
No 70
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=93.03 E-value=0.7 Score=38.93 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=45.6
Q ss_pred HHHHHhCCcEEEEeCCchh-hhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCCCEE
Q 026201 159 VFLEKAGARCIVMPCHLSH-IWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSPLRI 218 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH-~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~~rV 218 (241)
+.|...++|.|++...... ..++.+++ .++|+|-+ ...+++++.+.|.+ ||
T Consensus 60 ~~l~~~~vdgiIi~~~~~~~~~~~~l~~-~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~--------~I 130 (288)
T 3gv0_A 60 YILETGSADGVIISKIEPNDPRVRFMTE-RNMPFVTHGRSDMGIEHAFHDFDNEAYAYEAVERLAQCGRK--------RI 130 (288)
T ss_dssp HHHHHTCCSEEEEESCCTTCHHHHHHHH-TTCCEEEESCCCSSCCCEEEEECHHHHHHHHHHHHHHTTCC--------EE
T ss_pred HHHHcCCccEEEEecCCCCcHHHHHHhh-CCCCEEEECCcCCCCCCcEEEeCcHHHHHHHHHHHHHCCCC--------eE
Confidence 3466789998877643322 34555553 35665543 33566777777655 99
Q ss_pred EEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 219 GVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 219 GLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
++++.+. ..+..-|.+.++++|+
T Consensus 131 ~~i~~~~~~~~~~~R~~gf~~~l~~~g~ 158 (288)
T 3gv0_A 131 AVIVPPSRFSFHDHARKGFNRGIRDFGL 158 (288)
T ss_dssp EEECCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEcCCcccchHHHHHHHHHHHHHHcCC
Confidence 9997542 2233447788877763
No 71
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=93.03 E-value=0.77 Score=39.03 Aligned_cols=125 Identities=9% Similarity=0.101 Sum_probs=69.8
Q ss_pred cCCeEEEEeCCChH--HHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHH
Q 026201 79 QANTVGIVGGASVD--STLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVEN 153 (241)
Q Consensus 79 ~~k~IGIIGGmGp~--AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~ 153 (241)
+.++||++=.-... .+-.||..+.+...+. ....+++++.. .+.+.
T Consensus 21 ~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~-------------------------~~~~~---- 71 (305)
T 3huu_A 21 KTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGYSTRMTVSE-------------------------NSGDL---- 71 (305)
T ss_dssp CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTCEEEECCCS-------------------------SHHHH----
T ss_pred CCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCCEEEEEeCC-------------------------CChHH----
Confidence 46789998433111 3446777777776643 34455554411 01111
Q ss_pred HHHHHHHHHHhCCcEEEEeC-CchhhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCC
Q 026201 154 LRRKRVFLEKAGARCIVMPC-HLSHIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAG 213 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaC-NTAH~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~ 213 (241)
-.+.++.|...++|.|++.. +.....++.+++ .++|+|-+ ...+++++.+.|.+
T Consensus 72 ~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~l~~-~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~----- 145 (305)
T 3huu_A 72 YHEVKTMIQSKSVDGFILLYSLKDDPIEHLLNE-FKVPYLIVGKSLNYENIIHIDNDNIDAAYQLTQYLYHLGHR----- 145 (305)
T ss_dssp HHHHHHHHHTTCCSEEEESSCBTTCHHHHHHHH-TTCCEEEESCCCSSTTCCEEECCHHHHHHHHHHHHHHTTCC-----
T ss_pred HHHHHHHHHhCCCCEEEEeCCcCCcHHHHHHHH-cCCCEEEECCCCcccCCcEEEeCHHHHHHHHHHHHHHCCCC-----
Confidence 12334567788999877754 333334455543 25555543 23456777777655
Q ss_pred CCCEEEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 214 SPLRIGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 214 ~~~rVGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
||++++.+. ..+..-|.+.++++|+
T Consensus 146 ---~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~ 175 (305)
T 3huu_A 146 ---HILFLQESGHYAVTEDRSVGFKQYCDDVKI 175 (305)
T ss_dssp ---SEEEEEESSCBHHHHHHHHHHHHHHHHTTC
T ss_pred ---eEEEEcCCcccchhHHHHHHHHHHHHHcCC
Confidence 999997532 1233447888887764
No 72
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=92.68 E-value=1.9 Score=37.14 Aligned_cols=75 Identities=7% Similarity=0.005 Sum_probs=46.6
Q ss_pred HHHH-HhCCcEEEEeCCchhhh-HHHHhccCCCCeeec------------------------cHHHHHHHHHhcCCCCCC
Q 026201 159 VFLE-KAGARCIVMPCHLSHIW-HDEVCKGCSVPFLHV------------------------SECVAKELKEANMKPLEA 212 (241)
Q Consensus 159 ~~Le-~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~I------------------------id~t~~~i~~~~~k~~~~ 212 (241)
+.|. +.+++.|+.+..+.... ...+.+..++|+|.. ....++.+.+.|.+
T Consensus 65 ~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---- 140 (358)
T 3hut_A 65 RAFVDDPRVVGVLGDFSSTVSMAAGSIYGKEGMPQLSPTAAHPDYIKISPWQFRAITTPAFEGPNNAAWMIGDGFT---- 140 (358)
T ss_dssp HHHHHCTTEEEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGTTSCTTEEESSCCGGGHHHHHHHHHHHTTCC----
T ss_pred HHHhccCCcEEEEcCCCcHHHHHHHHHHHHCCCcEEecCCCCcccccCCCeEEEecCChHHHHHHHHHHHHHcCCC----
Confidence 4455 78999999886654432 233334457777764 12355666666554
Q ss_pred CCCCEEEEEecHHHH---hhhhHHHHHHhcCC
Q 026201 213 GSPLRIGVLAKNAIL---TAGFYQEKLQHEDC 241 (241)
Q Consensus 213 ~~~~rVGLLaT~~T~---~s~~Y~~~L~~~G~ 241 (241)
||++++.+... ...-|++.+++.|+
T Consensus 141 ----~ia~i~~~~~~~~~~~~~~~~~l~~~g~ 168 (358)
T 3hut_A 141 ----SVAVIGVTTDWGLSSAQAFRKAFELRGG 168 (358)
T ss_dssp ----EEEEEEESSHHHHHHHHHHHHHHHHTTC
T ss_pred ----EEEEEecCcHHHHHHHHHHHHHHHHcCC
Confidence 99999744322 34457788887764
No 73
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=92.55 E-value=1.3 Score=38.30 Aligned_cols=122 Identities=15% Similarity=0.097 Sum_probs=67.1
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+.++||++-.- -+-.||..+.+...+. ....+++++.. .+.+...
T Consensus 62 ~~~~Ig~i~~~---~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~-------------------------~~~~~~~---- 109 (332)
T 2o20_A 62 RTTTVGVILPT---ITSTYFAAITRGVDDIASMYKYNMILANSD-------------------------NDVEKEE---- 109 (332)
T ss_dssp CCCEEEEEESC---TTCHHHHHHHHHHHHHHHHTTCEEEEEECT-------------------------TCHHHHH----
T ss_pred CCCEEEEEeCC---CCCcHHHHHHHHHHHHHHHcCCEEEEEECC-------------------------CChHHHH----
Confidence 45789998532 1235777777666542 44555554411 1112222
Q ss_pred HHHHHHHHhCCcEEEEeCCch-hhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLS-HIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSP 215 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTA-H~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~ 215 (241)
+.++.|...++|.|++..... ...++.+++ .++|++-+ ...+++++.+.|.+
T Consensus 110 ~~~~~l~~~~vdgiI~~~~~~~~~~~~~l~~-~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~------- 181 (332)
T 2o20_A 110 KVLETFLSKQVDGIVYMGSSLDEKIRTSLKN-SRTPVVLVGTIDGDKEIPSVNIDYHLAAYQSTKKLIDSGNK------- 181 (332)
T ss_dssp HHHHHHHHTTCSEEEECSSCCCHHHHHHHHH-HCCCEEEESCCCTTSCSCEEECCHHHHHHHHHHHHHHTTCS-------
T ss_pred HHHHHHHhCCCCEEEEeCCCCCHHHHHHHHh-CCCCEEEEccccCCCCCCEEEeChHHHHHHHHHHHHHCCCC-------
Confidence 233456778999887765322 234455542 24554432 23456667776655
Q ss_pred CEEEEEecHH---H--HhhhhHHHHHHhcCC
Q 026201 216 LRIGVLAKNA---I--LTAGFYQEKLQHEDC 241 (241)
Q Consensus 216 ~rVGLLaT~~---T--~~s~~Y~~~L~~~G~ 241 (241)
|||+++.+. + .+..-|.+.++++|+
T Consensus 182 -~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~ 211 (332)
T 2o20_A 182 -KIAYIMGSLKDVENTERMVGYQEALLEANI 211 (332)
T ss_dssp -SEEEECSCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred -eEEEEeCCcccccHHHHHHHHHHHHHHcCC
Confidence 999997642 1 223347888887764
No 74
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=92.50 E-value=3.2 Score=35.24 Aligned_cols=75 Identities=7% Similarity=0.066 Sum_probs=43.6
Q ss_pred HHHHHHhCCcEEEEeCCchhh---hHHHHhccCCCCeeec--------------------cHHHHHHHHHh--cCCCCCC
Q 026201 158 RVFLEKAGARCIVMPCHLSHI---WHDEVCKGCSVPFLHV--------------------SECVAKELKEA--NMKPLEA 212 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH~---~~d~l~~~~~vPil~I--------------------id~t~~~i~~~--~~k~~~~ 212 (241)
++.|...++|.|++....... .++.+++ .++|+|-+ ...+++++.+. |.+
T Consensus 50 i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~~V~~d~~~~g~~a~~~L~~~~~G~~---- 124 (313)
T 2h3h_A 50 LESFIAEGVNGIAIAPSDPTAVIPTIKKALE-MGIPVVTLDTDSPDSGRYVYIGTDNYQAGYTAGLIMKELLGGKG---- 124 (313)
T ss_dssp HHHHHHTTCSEEEECCSSTTTTHHHHHHHHH-TTCCEEEESSCCTTSCCSCEEECCHHHHHHHHHHHHHHHHTSCS----
T ss_pred HHHHHHcCCCEEEEeCCChHHHHHHHHHHHH-CCCeEEEeCCCCCCcceeEEECcCHHHHHHHHHHHHHHHcCCCC----
Confidence 345667899988875544432 3444432 35665532 22345666665 544
Q ss_pred CCCCEEEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 213 GSPLRIGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 213 ~~~~rVGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
||++++.+. ..+..-|++.+++.|+
T Consensus 125 ----~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~ 154 (313)
T 2h3h_A 125 ----KVVIGTGSLTAMNSLQRIQGFKDAIKDSEI 154 (313)
T ss_dssp ----EEEEEESCSSCHHHHHHHHHHHHHHTTSSC
T ss_pred ----EEEEEECCCCCccHHHHHHHHHHHhcCCCC
Confidence 999997541 2233447777777663
No 75
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=92.43 E-value=0.66 Score=38.18 Aligned_cols=74 Identities=8% Similarity=0.052 Sum_probs=43.2
Q ss_pred HHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec-----------------cHHHHHHHHHhcCCCCCCCCCCEEEE
Q 026201 158 RVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV-----------------SECVAKELKEANMKPLEAGSPLRIGV 220 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I-----------------id~t~~~i~~~~~k~~~~~~~~rVGL 220 (241)
++.|...++|.|++....... .+.+++ .++|++-+ ...+++++.+.|.+ ||++
T Consensus 51 ~~~l~~~~vdgiI~~~~~~~~-~~~l~~-~~~pvV~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~--------~I~~ 120 (255)
T 1byk_A 51 LGVLKRRNIDGVVLFGFTGIT-EEMLAH-WQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHR--------NISY 120 (255)
T ss_dssp HHHHHTTTCCEEEEECCTTCC-TTTSGG-GSSSEEEESSCCSSCEEEEECHHHHHHHHHHHHHHTTCC--------CEEE
T ss_pred HHHHHhcCCCEEEEecCcccc-HHHHHh-cCCCEEEEccccCCCCEEEEccHHHHHHHHHHHHHcCCC--------eEEE
Confidence 356778899987775432111 122332 35666543 23466777777655 9999
Q ss_pred EecH--H----HHhhhhHHHHHHhcCC
Q 026201 221 LAKN--A----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 221 LaT~--~----T~~s~~Y~~~L~~~G~ 241 (241)
++.+ . ..+..-|++.++++|+
T Consensus 121 i~~~~~~~~~~~~R~~gf~~al~~~g~ 147 (255)
T 1byk_A 121 LGVPHSDVTTGKRRHEAYLAFCKAHKL 147 (255)
T ss_dssp ECCCTTSTTTTHHHHHHHHHHHHHTTC
T ss_pred EecCCCCcccHHHHHHHHHHHHHHcCC
Confidence 9853 1 1233447888888764
No 76
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=92.42 E-value=0.72 Score=38.80 Aligned_cols=74 Identities=11% Similarity=0.099 Sum_probs=41.6
Q ss_pred HHHHHhCCcEEEEeCCc-hhhhHHHHhccCCCCeeec------------------cHHHHHHHHHhcCCCCCCCCCCEEE
Q 026201 159 VFLEKAGARCIVMPCHL-SHIWHDEVCKGCSVPFLHV------------------SECVAKELKEANMKPLEAGSPLRIG 219 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNT-AH~~~d~l~~~~~vPil~I------------------id~t~~~i~~~~~k~~~~~~~~rVG 219 (241)
+.|...++|.|++.... ....++.+++ .++|+|-+ ...+++++.+.|.+ ||+
T Consensus 59 ~~l~~~~vdgiI~~~~~~~~~~~~~l~~-~~iPvV~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~--------~i~ 129 (290)
T 3clk_A 59 LTAIERPVMGILLLSIALTDDNLQLLQS-SDVPYCFLSMGFDDDRPFISSDDEDIGYQATNLLINEGHR--------QIG 129 (290)
T ss_dssp HHHHSSCCSEEEEESCC----CHHHHHC-C--CEEEESCC--CCSCEEECCHHHHHHHHHHHHHTTTCC--------SEE
T ss_pred HHHHhcCCCEEEEecccCCHHHHHHHHh-CCCCEEEEcCCCCCCCCEEEeChHHHHHHHHHHHHHcCCC--------EEE
Confidence 45667899987775433 2344566654 46676543 22344555555543 899
Q ss_pred EEecH-----HHHhhhhHHHHHHhcCC
Q 026201 220 VLAKN-----AILTAGFYQEKLQHEDC 241 (241)
Q Consensus 220 LLaT~-----~T~~s~~Y~~~L~~~G~ 241 (241)
+++.+ ...+..-|.+.++++|+
T Consensus 130 ~i~~~~~~~~~~~R~~gf~~~l~~~g~ 156 (290)
T 3clk_A 130 IAGIDQYPYTGRKRLAGYKKALKEANI 156 (290)
T ss_dssp EESCCCCTTTHHHHHHHHHHHHHHTTC
T ss_pred EEeCCCCCcchHHHHHHHHHHHHHcCC
Confidence 99754 12334457888887764
No 77
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=92.40 E-value=0.27 Score=43.23 Aligned_cols=55 Identities=15% Similarity=0.145 Sum_probs=45.2
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHh
Q 026201 151 VENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 151 ~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~ 205 (241)
.+.+.+.++.|.+.|+|.||+.|-=.-...+++.+..++|+|+-.+.+++++.+.
T Consensus 195 ~~~l~~~l~~l~~~g~d~vILGCTh~pll~~~l~~~~~v~viDs~~~~A~~~~~~ 249 (268)
T 3s81_A 195 QALLLPQIDSLIARGAQAIIMGCTEIPLIVAGHERAIACPMIDSTASLVRAAIRW 249 (268)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECSTTHHHHHTTTGGGSSSCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEECccCHHHHHHHHhcCCCCeEEccHHHHHHHHHHH
Confidence 5567777788888999999999985555567777778999999999999998875
No 78
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=92.35 E-value=0.39 Score=43.37 Aligned_cols=105 Identities=18% Similarity=0.155 Sum_probs=63.0
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC--CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRK 157 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d--~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~ 157 (241)
.|+.|-++|-.-..+.++.+||.....+. ..++++|.-..+. +.. .. +-+.+. -
T Consensus 128 ~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa---~~~-----------------~g---ldeAi~-R 183 (307)
T 3lye_A 128 TKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDA---LQS-----------------LG---YEECIE-R 183 (307)
T ss_dssp CC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECC---HHH-----------------HC---HHHHHH-H
T ss_pred CcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechh---hhc-----------------cC---HHHHHH-H
Confidence 57788888877778889999998887754 3466776542211 000 01 222232 3
Q ss_pred HHHHHHhCCcEEEEeCCchhhhHHHHhccCC-CCee-eccH------HHHHHHHHhcCC
Q 026201 158 RVFLEKAGARCIVMPCHLSHIWHDEVCKGCS-VPFL-HVSE------CVAKELKEANMK 208 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~-vPil-~Iid------~t~~~i~~~~~k 208 (241)
++..+++|||+|.++|-+.-.-+.++.+.++ +|++ +|++ .+.+++.+.|.+
T Consensus 184 a~ay~eAGAD~ifi~~~~~~~~~~~i~~~~~~~Pv~~n~~~~g~~p~~t~~eL~~lGv~ 242 (307)
T 3lye_A 184 LRAARDEGADVGLLEGFRSKEQAAAAVAALAPWPLLLNSVENGHSPLITVEEAKAMGFR 242 (307)
T ss_dssp HHHHHHTTCSEEEECCCSCHHHHHHHHHHHTTSCBEEEEETTSSSCCCCHHHHHHHTCS
T ss_pred HHHHHHCCCCEEEecCCCCHHHHHHHHHHccCCceeEEeecCCCCCCCCHHHHHHcCCe
Confidence 3456789999999999876555677777664 8864 6654 257899999886
No 79
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=92.30 E-value=0.87 Score=38.36 Aligned_cols=122 Identities=11% Similarity=0.173 Sum_probs=65.3
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+.++||++--- .+-.||..+.+...+. ....+++++.. .+.+...
T Consensus 19 ~~~~Ig~i~~~---~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~-------------------------~~~~~~~---- 66 (293)
T 2iks_A 19 RTRSIGLVIPD---LENTSYTRIANYLERQARQRGYQLLIACSE-------------------------DQPDNEM---- 66 (293)
T ss_dssp CCCEEEEEESC---SCSHHHHHHHHHHHHHHHHTTCEEEEEECT-------------------------TCHHHHH----
T ss_pred CCcEEEEEeCC---CcCcHHHHHHHHHHHHHHHCCCEEEEEcCC-------------------------CCHHHHH----
Confidence 35789998521 1235777776666542 34555554311 1122222
Q ss_pred HHHHHHHHhCCcEEEEeCCch-h-hhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLS-H-IWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGS 214 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTA-H-~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~ 214 (241)
+.++.|...++|.|++..... . ..++.+++ .++|+|-+ ...+++++.+.|.+
T Consensus 67 ~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~------ 139 (293)
T 2iks_A 67 RCIEHLLQRQVDAIIVSTSLPPEHPFYQRWAN-DPFPIVALDRALDREHFTSVVGADQDDAEMLAEELRKFPAE------ 139 (293)
T ss_dssp HHHHHHHHTTCSEEEECCSSCTTCHHHHTTTT-SSSCEEEEESCCCTTTCEEEEECHHHHHHHHHHHHHTSCCS------
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcHHHHHHHHh-CCCCEEEECCccCcCCCCEEEecCHHHHHHHHHHHHHCCCC------
Confidence 233567788999888765432 2 13344432 46776543 12344555555443
Q ss_pred CCEEEEEecHH---H--HhhhhHHHHHHhcCC
Q 026201 215 PLRIGVLAKNA---I--LTAGFYQEKLQHEDC 241 (241)
Q Consensus 215 ~~rVGLLaT~~---T--~~s~~Y~~~L~~~G~ 241 (241)
||++++.+. + .+..-|.+.++++|+
T Consensus 140 --~I~~i~~~~~~~~~~~R~~Gf~~~l~~~g~ 169 (293)
T 2iks_A 140 --TVLYLGALPELSVSFLREQGFRTAWKDDPR 169 (293)
T ss_dssp --SEEEEEECTTSHHHHHHHHHHHHHHTTCCC
T ss_pred --EEEEEecCcccccHHHHHHHHHHHHHHcCC
Confidence 899997531 1 223347788877763
No 80
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=92.19 E-value=2.3 Score=36.59 Aligned_cols=75 Identities=12% Similarity=0.112 Sum_probs=46.6
Q ss_pred HHHH-HhCCcEEEEeCCchhhh-HHHHhccCCCCeeec------------------------cHHHHHHHHHhcCCCCCC
Q 026201 159 VFLE-KAGARCIVMPCHLSHIW-HDEVCKGCSVPFLHV------------------------SECVAKELKEANMKPLEA 212 (241)
Q Consensus 159 ~~Le-~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~I------------------------id~t~~~i~~~~~k~~~~ 212 (241)
+.|. +.+++.|+-|..+.... ...+.+..++|+|.. ....++.+.+.+.+
T Consensus 65 ~~li~~~~v~~iiG~~~s~~~~~~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~---- 140 (368)
T 4eyg_A 65 QELIVNDKVNVIAGFGITPAALAAAPLATQAKVPEIVMAAGTSIITERSPYIVRTSFTLAQSSIIIGDWAAKNGIK---- 140 (368)
T ss_dssp HHHHHTSCCSEEEECSSHHHHHHHHHHHHHHTCCEEESSCCCGGGGGGCTTEEESSCCHHHHHHHHHHHHHHTTCC----
T ss_pred HHHHhcCCcEEEECCCccHHHHHHHHHHHhCCceEEeccCCChhhccCCCCEEEecCChHHHHHHHHHHHHHcCCC----
Confidence 3454 48999999876655432 233444557777754 12355666665554
Q ss_pred CCCCEEEEEecHHHH---hhhhHHHHHHhcCC
Q 026201 213 GSPLRIGVLAKNAIL---TAGFYQEKLQHEDC 241 (241)
Q Consensus 213 ~~~~rVGLLaT~~T~---~s~~Y~~~L~~~G~ 241 (241)
||+++..+... ...-|++.+++.|+
T Consensus 141 ----~ia~i~~~~~~g~~~~~~~~~~l~~~g~ 168 (368)
T 4eyg_A 141 ----KVATLTSDYAPGNDALAFFKERFTAGGG 168 (368)
T ss_dssp ----EEEEEEESSHHHHHHHHHHHHHHHHTTC
T ss_pred ----EEEEEecCchHhHHHHHHHHHHHHHcCC
Confidence 99999865432 24567788887764
No 81
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=92.13 E-value=0.24 Score=43.91 Aligned_cols=43 Identities=21% Similarity=0.420 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 152 ~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
+.+.+.++.++++||+.|++.|-.. ..+.+|.+.+++|+++|.
T Consensus 161 ~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l~iP~igIG 203 (264)
T 1m3u_A 161 DQLLSDALALEAAGAQLLVLECVPV-ELAKRITEALAIPVIGIG 203 (264)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCCH-HHHHHHHHHCSSCEEEES
T ss_pred HHHHHHHHHHHHCCCcEEEEecCCH-HHHHHHHHhCCCCEEEeC
Confidence 4455667889999999999999775 567899999999999983
No 82
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=92.11 E-value=2.2 Score=35.47 Aligned_cols=106 Identities=8% Similarity=0.094 Sum_probs=60.6
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+.++||++=.- .+-.||..+.+...+. ....+++++.. .+.+.. .
T Consensus 6 ~s~~Igvi~~~---~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~-------------------------~~~~~~----~ 53 (276)
T 3jy6_A 6 SSKLIAVIVAN---IDDYFSTELFKGISSILESRGYIGVLFDAN-------------------------ADIERE----K 53 (276)
T ss_dssp CCCEEEEEESC---TTSHHHHHHHHHHHHHHHTTTCEEEEEECT-------------------------TCHHHH----H
T ss_pred CCcEEEEEeCC---CCchHHHHHHHHHHHHHHHCCCEEEEEeCC-------------------------CCHHHH----H
Confidence 46789998532 2345777777666542 44555554411 111221 2
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSPL 216 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~~ 216 (241)
+.++.|...++|.|++........++.+++ .++|+|-+ ...+++++.+.|.+
T Consensus 54 ~~~~~l~~~~vdgiIi~~~~~~~~~~~l~~-~~iPvV~i~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~-------- 124 (276)
T 3jy6_A 54 TLLRAIGSRGFDGLILQSFSNPQTVQEILH-QQMPVVSVDREMDACPWPQVVTDNFEAAKAATTAFRQQGYQ-------- 124 (276)
T ss_dssp HHHHHHHTTTCSEEEEESSCCHHHHHHHHT-TSSCEEEESCCCTTCSSCEEECCHHHHHHHHHHHHHTTTCC--------
T ss_pred HHHHHHHhCCCCEEEEecCCcHHHHHHHHH-CCCCEEEEecccCCCCCCEEEEChHHHHHHHHHHHHHcCCC--------
Confidence 334567788999877766554444555553 35665543 22355666666544
Q ss_pred EEEEEecHH
Q 026201 217 RIGVLAKNA 225 (241)
Q Consensus 217 rVGLLaT~~ 225 (241)
+|++++.+.
T Consensus 125 ~I~~i~~~~ 133 (276)
T 3jy6_A 125 HVVVLTSEL 133 (276)
T ss_dssp EEEEEEECS
T ss_pred eEEEEecCC
Confidence 999997654
No 83
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=91.93 E-value=0.55 Score=42.37 Aligned_cols=53 Identities=21% Similarity=0.205 Sum_probs=42.3
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCee-eccH------HHHHHHHHhcCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL-HVSE------CVAKELKEANMK 208 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil-~Iid------~t~~~i~~~~~k 208 (241)
+.++.++++|||+|+++|-+.-..+.++.+.+++|++ +|++ .+.+++.+.|.+
T Consensus 179 ~Ra~ay~eAGAD~i~~e~~~~~~~~~~i~~~~~~P~~~n~~~~g~tp~~~~~eL~~lGv~ 238 (305)
T 3ih1_A 179 ERANAYVKAGADAIFPEALQSEEEFRLFNSKVNAPLLANMTEFGKTPYYSAEEFANMGFQ 238 (305)
T ss_dssp HHHHHHHHHTCSEEEETTCCSHHHHHHHHHHSCSCBEEECCTTSSSCCCCHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEcCCCCHHHHHHHHHHcCCCEEEeecCCCCCCCCCHHHHHHcCCC
Confidence 4456788999999999998765667888889999987 6643 357889999875
No 84
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=91.69 E-value=0.23 Score=44.37 Aligned_cols=42 Identities=24% Similarity=0.367 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 153 NLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 153 ~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
.+.+.++.++++||+.|++.|-.. ..+.+|.+.+++|+++|.
T Consensus 162 ~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l~iP~igIG 203 (275)
T 1o66_A 162 ALLNDAKAHDDAGAAVVLMECVLA-ELAKKVTETVSCPTIGIG 203 (275)
T ss_dssp HHHHHHHHHHHTTCSEEEEESCCH-HHHHHHHHHCSSCEEEES
T ss_pred HHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHhCCCCEEEEC
Confidence 344566789999999999999775 567899999999999983
No 85
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=91.69 E-value=5.2 Score=33.40 Aligned_cols=35 Identities=11% Similarity=0.081 Sum_probs=20.9
Q ss_pred HHHHHHhCCcEEEEeCCchh---hhHHHHhccCCCCeee
Q 026201 158 RVFLEKAGARCIVMPCHLSH---IWHDEVCKGCSVPFLH 193 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH---~~~d~l~~~~~vPil~ 193 (241)
++.|...++|.|++...... ..++++++ .++|+|-
T Consensus 52 ~~~~~~~~vdgiii~~~~~~~~~~~~~~~~~-~~iPvV~ 89 (309)
T 2fvy_A 52 IDVLLAKGVKALAINLVDPAAAGTVIEKARG-QNVPVVF 89 (309)
T ss_dssp HHHHHHTTCSEEEECCSSGGGHHHHHHHHHT-TTCCEEE
T ss_pred HHHHHHcCCCEEEEeCCCcchhHHHHHHHHH-CCCcEEE
Confidence 35667889998887553332 33455543 4677654
No 86
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=91.66 E-value=0.7 Score=40.51 Aligned_cols=97 Identities=12% Similarity=0.104 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHhccC-C-CCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhCCcEEE
Q 026201 93 STLNLLGKLVQLSGEE-N-DFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGARCIV 170 (241)
Q Consensus 93 AT~~fy~kI~~~t~~d-~-~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~Le~~Gad~Iv 170 (241)
...++.++|...+.+. + .+++++.-+.+. .+.+. .++ .+.+.+ +.+.++.++++|||+|+
T Consensus 125 ~~~e~~~~I~a~~~a~~~~g~~~~v~aRtd~--~~~g~-~~~--------------~~~~~~-ai~ra~a~~eAGAd~i~ 186 (255)
T 2qiw_A 125 EAQEHADYIAAARQAADVAGVDVVINGRTDA--VKLGA-DVF--------------EDPMVE-AIKRIKLMEQAGARSVY 186 (255)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCCEEEEEECH--HHHCT-TTS--------------SSHHHH-HHHHHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHHHHHHHhcCCCeEEEEEech--hhccC-Ccc--------------hHHHHH-HHHHHHHHHHcCCcEEE
Confidence 3457888888887764 2 466666442221 11110 000 011222 33455678999999999
Q ss_pred EeCCchhhhHHHHhccCCCCeeecc--H------HHHHHHHHhcCC
Q 026201 171 MPCHLSHIWHDEVCKGCSVPFLHVS--E------CVAKELKEANMK 208 (241)
Q Consensus 171 IaCNTAH~~~d~l~~~~~vPil~Ii--d------~t~~~i~~~~~k 208 (241)
++|-..-..+.++.+.+++|+ +++ . .+.+++.+.|.+
T Consensus 187 ~e~~~~~~~~~~i~~~~~~P~-n~~~~~~~~~p~~~~~eL~~lGv~ 231 (255)
T 2qiw_A 187 PVGLSTAEQVERLVDAVSVPV-NITAHPVDGHGAGDLATLAGLGVR 231 (255)
T ss_dssp ECCCCSHHHHHHHHTTCSSCB-EEECBTTTBBTTBCHHHHHHTTCC
T ss_pred EcCCCCHHHHHHHHHhCCCCE-EEEecCCCCCCCCCHHHHHHcCCC
Confidence 999754466788999999997 443 2 358899999875
No 87
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=91.60 E-value=0.53 Score=39.51 Aligned_cols=118 Identities=14% Similarity=0.158 Sum_probs=63.7
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRR 156 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~ 156 (241)
.++||++-.. +-.||..+.+...+. ....+++++.. .+.+... +
T Consensus 8 ~~~Igvi~~~----~~~~~~~~~~gi~~~~~~~g~~~~~~~~~-------------------------~~~~~~~----~ 54 (288)
T 2qu7_A 8 SNIIAFIVPD----QNPFFTEVLTEISHECQKHHLHVAVASSE-------------------------ENEDKQQ----D 54 (288)
T ss_dssp EEEEEEEESS----CCHHHHHHHHHHHHHHGGGTCEEEEEECT-------------------------TCHHHHH----H
T ss_pred CCEEEEEECC----CCchHHHHHHHHHHHHHHCCCEEEEEeCC-------------------------CCHHHHH----H
Confidence 4689998643 446777777666532 33445554311 1112222 2
Q ss_pred HHHHHHHhCCcEEEEeCCchh-hhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCCC
Q 026201 157 KRVFLEKAGARCIVMPCHLSH-IWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSPL 216 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH-~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~~ 216 (241)
.++.|...++|.|++...... ..++.+ .++|++-+ ...+++++.+.|.+
T Consensus 55 ~~~~l~~~~vdgiI~~~~~~~~~~~~~l---~~iPvV~~~~~~~~~~~~~V~~d~~~~g~~a~~~L~~~G~~-------- 123 (288)
T 2qu7_A 55 LIETFVSQNVSAIILVPVKSKFQMKREW---LKIPIMTLDRELESTSLPSITVDNEEAAYIATKRVLESTCK-------- 123 (288)
T ss_dssp HHHHHHHTTEEEEEECCSSSCCCCCGGG---GGSCEEEESCCCSSCCCCEEEECHHHHHHHHHHHHHTSSCC--------
T ss_pred HHHHHHHcCccEEEEecCCCChHHHHHh---cCCCEEEEecccCCCCCCEEEECcHHHHHHHHHHHHHcCCC--------
Confidence 345667889998887654322 233333 34554432 22344555555443
Q ss_pred EEEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 217 RIGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 217 rVGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
||++++.+. ..+..-|.+.++++|+
T Consensus 124 ~I~~i~~~~~~~~~~~R~~gf~~~l~~~g~ 153 (288)
T 2qu7_A 124 EVGLLLANPNISTTIGRKNGYNKAISEFDL 153 (288)
T ss_dssp CEEEEECCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred cEEEEecCCCCCCHHHHHHHHHHHHHHcCC
Confidence 999997531 2233447788877764
No 88
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=91.55 E-value=2.1 Score=35.73 Aligned_cols=127 Identities=9% Similarity=0.052 Sum_probs=68.5
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---C-CCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---N-DFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENL 154 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~-~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l 154 (241)
+.++||++=-... +-.||..+.+...+. . ...++++.... ...+.+...
T Consensus 7 ~~~~Igvi~~~~~--~~~~~~~~~~gi~~~a~~~~g~~~~~~~~~~----------------------~~~~~~~~~--- 59 (304)
T 3gbv_A 7 KKYTFACLLPKHL--EGEYWTDVQKGIREAVTTYSDFNISANITHY----------------------DPYDYNSFV--- 59 (304)
T ss_dssp CCEEEEEEEECCC--TTSHHHHHHHHHHHHHHHTGGGCEEEEEEEE----------------------CSSCHHHHH---
T ss_pred CcceEEEEecCCC--CchHHHHHHHHHHHHHHHHHhCCeEEEEEcC----------------------CCCCHHHHH---
Confidence 3568997742210 335777777766643 3 45666643100 011222222
Q ss_pred HHHHHHHHHhCCcEEEEeCCchh---hhHHHHhccCCCCeeec--------------------cHHHHHHHHHhcCCCCC
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSH---IWHDEVCKGCSVPFLHV--------------------SECVAKELKEANMKPLE 211 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH---~~~d~l~~~~~vPil~I--------------------id~t~~~i~~~~~k~~~ 211 (241)
+.++.|...++|.|++...... ..++.+++. ++|+|-+ ...+++++.+.|..
T Consensus 60 -~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~-~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g~~--- 134 (304)
T 3gbv_A 60 -ATSQAVIEEQPDGVMFAPTVPQYTKGFTDALNEL-GIPYIYIDSQIKDAPPLAFFGQNSHQSGYFAARMLMLLAVN--- 134 (304)
T ss_dssp -HHHHHHHTTCCSEEEECCSSGGGTHHHHHHHHHH-TCCEEEESSCCTTSCCSEEEECCHHHHHHHHHHHHHHHSTT---
T ss_pred -HHHHHHHhcCCCEEEECCCChHHHHHHHHHHHHC-CCeEEEEeCCCCCCCceEEEecChHHHHHHHHHHHHHHhCC---
Confidence 2345677889998877654432 234444432 4444432 23456777777651
Q ss_pred CCCCCEEEEEe---------cHHHHhhhhHHHHHHhcC
Q 026201 212 AGSPLRIGVLA---------KNAILTAGFYQEKLQHED 240 (241)
Q Consensus 212 ~~~~~rVGLLa---------T~~T~~s~~Y~~~L~~~G 240 (241)
.++|++++ +....+..-|.+.++++|
T Consensus 135 ---~~~i~~i~~~~~g~~~~~~~~~R~~gf~~~l~~~g 169 (304)
T 3gbv_A 135 ---DREIVIFRKIHEGVIGSNQQESREIGFRQYMQEHH 169 (304)
T ss_dssp ---CSEEEEEEEEBTTBCCCHHHHHHHHHHHHHHHHHC
T ss_pred ---CCeEEEEEecccCCccchhHHHHHHHHHHHHHhhC
Confidence 24999997 223344455888888776
No 89
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=91.47 E-value=1.2 Score=38.49 Aligned_cols=75 Identities=8% Similarity=0.088 Sum_probs=45.9
Q ss_pred HHHHH-hCCcEEEEeCCchhhh-HHHHhccCCCCeeec--------------------------cHHHHHHHHHhcCCCC
Q 026201 159 VFLEK-AGARCIVMPCHLSHIW-HDEVCKGCSVPFLHV--------------------------SECVAKELKEANMKPL 210 (241)
Q Consensus 159 ~~Le~-~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~I--------------------------id~t~~~i~~~~~k~~ 210 (241)
+.|.. .+++.|+.+..+.... ...+.+..++|+|.. ...+++.+.+.|.+
T Consensus 75 ~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~-- 152 (375)
T 4evq_A 75 TKLIQSEKADVLIGTVHSGVAMAMVKIAREDGIPTIVPNAGADIITRAMCAPNVFRTSFANGQIGRATGDAMIKAGLK-- 152 (375)
T ss_dssp HCCCCCSCCSEEEECSSHHHHHHHHHHHHHHCCCEEESSCCCGGGGTTTCCTTEEESSCCHHHHHHHHHHHHHHTTCC--
T ss_pred HHHHhcCCceEEEcCCccHHHHHHHHHHHHcCceEEecCCCChhhcccCCCCCEEEeeCChHhHHHHHHHHHHHcCCc--
Confidence 34544 4899998886654432 233344456777732 22455666666554
Q ss_pred CCCCCCEEEEEecHHHH---hhhhHHHHHHhcCC
Q 026201 211 EAGSPLRIGVLAKNAIL---TAGFYQEKLQHEDC 241 (241)
Q Consensus 211 ~~~~~~rVGLLaT~~T~---~s~~Y~~~L~~~G~ 241 (241)
||++++.+... ...-|++.+++.|+
T Consensus 153 ------~ia~i~~~~~~~~~~~~~~~~~l~~~G~ 180 (375)
T 4evq_A 153 ------KAVTVTWKYAAGEEMVSGFKKSFTAGKG 180 (375)
T ss_dssp ------EEEEEEESSHHHHHHHHHHHHHHHHTTC
T ss_pred ------EEEEEecCchHHHHHHHHHHHHHHHcCC
Confidence 99999865432 24567888888774
No 90
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=91.35 E-value=2 Score=37.13 Aligned_cols=76 Identities=8% Similarity=0.094 Sum_probs=46.3
Q ss_pred HHHHHHh-CCcEEEEeCCchhhh-HHHHhccCCCCeeecc---------------------------HHHHHHHHHhcCC
Q 026201 158 RVFLEKA-GARCIVMPCHLSHIW-HDEVCKGCSVPFLHVS---------------------------ECVAKELKEANMK 208 (241)
Q Consensus 158 ~~~Le~~-Gad~IvIaCNTAH~~-~d~l~~~~~vPil~Ii---------------------------d~t~~~i~~~~~k 208 (241)
++.|... +++.|+.|..+.... .-.+.+..++|+|... ...++.+.+.|.+
T Consensus 81 ~~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~ 160 (386)
T 3sg0_A 81 ARKLLSEEKVDVLIGSSLTPVSLPLIDIAAEAKTPLMTMAAAAILVAPMDERRKWVYKVVPNDDIMAEAIGKYIAKTGAK 160 (386)
T ss_dssp HHHHHHTSCCSEEECCSSHHHHHHHHHHHHHTTCCEEECCCCGGGTCSCCTTGGGEEECSCCHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhhcCceEEECCCCchhHHHHHHHHHhcCCeEEEecCCCccccccCCCCCcEEecCCCcHHHHHHHHHHHHhcCCC
Confidence 3445555 899999876654432 2344455677776532 2455666665544
Q ss_pred CCCCCCCCEEEEEecHHHH---hhhhHHHHHHhcCC
Q 026201 209 PLEAGSPLRIGVLAKNAIL---TAGFYQEKLQHEDC 241 (241)
Q Consensus 209 ~~~~~~~~rVGLLaT~~T~---~s~~Y~~~L~~~G~ 241 (241)
||+++..+... ...-|++.+++.|+
T Consensus 161 --------~ia~i~~~~~~~~~~~~~~~~~l~~~g~ 188 (386)
T 3sg0_A 161 --------KVGYIGFSDAYGEGYYKVLAAAAPKLGF 188 (386)
T ss_dssp --------EEEEEEESSHHHHHHHHHHHHHHHHHTC
T ss_pred --------EEEEEecCchHHHHHHHHHHHHHHHcCC
Confidence 99999754332 34557778877764
No 91
>1oy0_A Ketopantoate hydroxymethyltransferase; domain swapping, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: c.1.12.8
Probab=91.30 E-value=0.26 Score=44.09 Aligned_cols=43 Identities=16% Similarity=0.226 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 152 ENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 152 ~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
+.+.+.++.++++||+.|++.|-.. ..+.+|.+.+++|+++|.
T Consensus 179 ~~~i~rA~a~~eAGA~~ivlE~vp~-~~a~~it~~l~iP~igIG 221 (281)
T 1oy0_A 179 EQTIADAIAVAEAGAFAVVMEMVPA-ELATQITGKLTIPTVGIG 221 (281)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCCH-HHHHHHHHHCSSCEEEES
T ss_pred HHHHHHHHHHHHcCCcEEEEecCCH-HHHHHHHHhCCCCEEEeC
Confidence 4455667889999999999999775 567899999999999983
No 92
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=91.30 E-value=2.2 Score=37.23 Aligned_cols=122 Identities=14% Similarity=0.156 Sum_probs=64.6
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+.++||++--- .+-.||..+.+...+. ....+++++.. .+.+...
T Consensus 65 ~s~~Igvi~~~---~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~-------------------------~~~~~~~---- 112 (348)
T 3bil_A 65 RSNTIGVIVPS---LINHYFAAMVTEIQSTASKAGLATIITNSN-------------------------EDATTMS---- 112 (348)
T ss_dssp ---CEEEEESC---SSSHHHHHHHHHHHHHHHHTTCCEEEEECT-------------------------TCHHHHH----
T ss_pred CCCEEEEEeCC---CCCcHHHHHHHHHHHHHHHcCCEEEEEeCC-------------------------CCHHHHH----
Confidence 35689998521 1235777776666542 34555554411 1111112
Q ss_pred HHHHHHHHhCCcEEEEeCCch-hhhHHHHhccCCCCeeec--------------------cHHHHHHHHHhcCCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLS-HIWHDEVCKGCSVPFLHV--------------------SECVAKELKEANMKPLEAGS 214 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTA-H~~~d~l~~~~~vPil~I--------------------id~t~~~i~~~~~k~~~~~~ 214 (241)
+.++.|...++|.|++..... ...++.+++ .++|+|-+ ...+++++.+.|.+
T Consensus 113 ~~~~~l~~~~vdgiI~~~~~~~~~~~~~l~~-~~iPvV~i~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~------ 185 (348)
T 3bil_A 113 GSLEFLTSHGVDGIICVPNEECANQLEDLQK-QGMPVVLVDRELPGDSTIPTATSNPQPGIAAAVELLAHNNAL------ 185 (348)
T ss_dssp HHHHHHHHTTCSCEEECCCGGGHHHHHHHHH-C-CCEEEESSCCSCC-CCCEEEEECHHHHHHHHHHHHHTTCC------
T ss_pred HHHHHHHhCCCCEEEEeCCCCChHHHHHHHh-CCCCEEEEcccCCCCCCCCEEEeChHHHHHHHHHHHHHCCCC------
Confidence 233566778999777755432 234455543 34554432 23456667776654
Q ss_pred CCEEEEEecHH---H--HhhhhHHHHHHhcCC
Q 026201 215 PLRIGVLAKNA---I--LTAGFYQEKLQHEDC 241 (241)
Q Consensus 215 ~~rVGLLaT~~---T--~~s~~Y~~~L~~~G~ 241 (241)
||++++.+. + .+..-|.+.++++|+
T Consensus 186 --~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~ 215 (348)
T 3bil_A 186 --PIGYLSGPMDTSTGRERLEDFKAACANSKI 215 (348)
T ss_dssp --SEEEECCCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred --eEEEEeCCCCCccHHHHHHHHHHHHHHcCc
Confidence 999997542 1 223347788887764
No 93
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=91.24 E-value=2.4 Score=37.26 Aligned_cols=74 Identities=5% Similarity=-0.009 Sum_probs=43.3
Q ss_pred HHHH-HhCCcEEEEeCCchhh-hHHHHhccCCCCeeec----------------------cHHHHHHHHHh-cCCCCCCC
Q 026201 159 VFLE-KAGARCIVMPCHLSHI-WHDEVCKGCSVPFLHV----------------------SECVAKELKEA-NMKPLEAG 213 (241)
Q Consensus 159 ~~Le-~~Gad~IvIaCNTAH~-~~d~l~~~~~vPil~I----------------------id~t~~~i~~~-~~k~~~~~ 213 (241)
+.|. +.+++.|+.+| +... ..-.+.+..++|+|.. ....++.+.+. +.+
T Consensus 69 ~~li~~~~V~~iiG~~-s~~~~a~~~~~~~~~iP~i~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~g~~----- 142 (391)
T 3eaf_A 69 REFRDRYGVIAIIGWG-TADTEKLSDQVDTDKITYISASYSAKLLVKPFNFYPAPDYSTQACSGLAFLASEFGQG----- 142 (391)
T ss_dssp HHHHHTTCCSEEEECC-HHHHHHHHHHHHHHTCEEEESCCCGGGTTSTTEECSSCCHHHHHHHHHHHHHHHHCSE-----
T ss_pred HHHHhhcCcEEEEEcC-cHHHHHHHHHHhhcCCeEEecccchhhcCCCcEEEeCCCHHHHHHHHHHHHHHhcCCC-----
Confidence 4455 78999998854 3332 2233334457777642 22345566664 655
Q ss_pred CCCEEEEEec-HHHH---hhhhHHHHHHhcCC
Q 026201 214 SPLRIGVLAK-NAIL---TAGFYQEKLQHEDC 241 (241)
Q Consensus 214 ~~~rVGLLaT-~~T~---~s~~Y~~~L~~~G~ 241 (241)
||+++.. +... ....|++.+++.|+
T Consensus 143 ---~iaii~~~~~~~g~~~~~~~~~~l~~~G~ 171 (391)
T 3eaf_A 143 ---KLALAYDSKVAYSRSPIGAIKKAAPSLGL 171 (391)
T ss_dssp ---EEEEEECTTCHHHHTTHHHHHHHTGGGTE
T ss_pred ---EEEEEEecCChhHHHHHHHHHHHHHHcCC
Confidence 9999987 3222 24457777777763
No 94
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=91.20 E-value=5.7 Score=32.92 Aligned_cols=119 Identities=13% Similarity=0.058 Sum_probs=66.1
Q ss_pred cCCeEEEEeC-CChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHH
Q 026201 79 QANTVGIVGG-ASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENL 154 (241)
Q Consensus 79 ~~k~IGIIGG-mGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l 154 (241)
+.++||++-- ++ -.|+..+.+...+. ....+++++.. .+.+...
T Consensus 4 ~~~~Ig~i~~~~~----~~~~~~~~~gi~~~a~~~g~~~~~~~~~-------------------------~~~~~~~--- 51 (291)
T 3l49_A 4 EGKTIGITAIGTD----HDWDLKAYQAQIAEIERLGGTAIALDAG-------------------------RNDQTQV--- 51 (291)
T ss_dssp TTCEEEEEESCCS----SHHHHHHHHHHHHHHHHTTCEEEEEECT-------------------------TCHHHHH---
T ss_pred CCcEEEEEeCCCC----ChHHHHHHHHHHHHHHHcCCEEEEEcCC-------------------------CCHHHHH---
Confidence 3578999863 33 35666666655532 45566665411 1222222
Q ss_pred HHHHHHHHHhCCcEEEEeCCchh---hhHHHHhccCCCCeeec------------------cHHHHHHHHH--hcCCCCC
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSH---IWHDEVCKGCSVPFLHV------------------SECVAKELKE--ANMKPLE 211 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH---~~~d~l~~~~~vPil~I------------------id~t~~~i~~--~~~k~~~ 211 (241)
+.++.|...++|.|++...... ..++.+.+ .++|++-+ ...+++++.+ .|.+
T Consensus 52 -~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~~--- 126 (291)
T 3l49_A 52 -SQIQTLIAQKPDAIIEQLGNLDVLNPWLQKIND-AGIPLFTVDTATPHAINNTTSNNYSIGAELALQMVADLGGKG--- 126 (291)
T ss_dssp -HHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHH-TTCCEEEESCCCTTCSEEEEECHHHHHHHHHHHHHHHHTTCE---
T ss_pred -HHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHH-CCCcEEEecCCCCCcCceEecChHHHHHHHHHHHHHHcCCCc---
Confidence 2345677889998887554322 23444443 35666543 3345667777 5544
Q ss_pred CCCCCEEEEEecHH-----HHhhhhHHHHHHhc
Q 026201 212 AGSPLRIGVLAKNA-----ILTAGFYQEKLQHE 239 (241)
Q Consensus 212 ~~~~~rVGLLaT~~-----T~~s~~Y~~~L~~~ 239 (241)
||++++... ..+..-|++.++++
T Consensus 127 -----~i~~i~~~~~~~~~~~R~~gf~~~l~~~ 154 (291)
T 3l49_A 127 -----NVLVFNGFYSVPVCKIRYDQMKYVLEAF 154 (291)
T ss_dssp -----EEEEECSCTTSHHHHHHHHHHHHHHHTC
T ss_pred -----eEEEEeCCCCCchHHHHHHHHHHHHHHC
Confidence 999997421 11233477888776
No 95
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=91.18 E-value=2.7 Score=36.80 Aligned_cols=75 Identities=1% Similarity=-0.079 Sum_probs=43.5
Q ss_pred HHHHHHh-CCcEEEEeCCchhh-hHHHHhccCCCCeeec-------------------------cHHHHHHHHHh-cCCC
Q 026201 158 RVFLEKA-GARCIVMPCHLSHI-WHDEVCKGCSVPFLHV-------------------------SECVAKELKEA-NMKP 209 (241)
Q Consensus 158 ~~~Le~~-Gad~IvIaCNTAH~-~~d~l~~~~~vPil~I-------------------------id~t~~~i~~~-~~k~ 209 (241)
++.|... +++.|+.+ .+... ..-.+.+..++|+|.. ....++.+.+. +.+
T Consensus 67 ~~~li~~~~V~~iig~-~s~~~~~~~~~~~~~~iP~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~~g~~- 144 (392)
T 3lkb_A 67 FEEAVDRFKIPVFLSY-ATGANLQLKPLIQELRIPTIPASMHIELIDPPNNDYIFLPTTSYSEQVVALLEYIAREKKGA- 144 (392)
T ss_dssp HHHHHHTTCCSCEEEC-CHHHHHHHHHHHHHHTCCEEESCCCGGGGSSSSCTTBCEEECCHHHHHHHHHHHHHHHCTTC-
T ss_pred HHHHHhhcCcEEEEeC-CcHHHHHHHHHHHhCCceEEecccChhhccCCCCCceEecCCChHHHHHHHHHHHHHhCCCC-
Confidence 3456555 99988884 33322 2233334456776652 12345566664 544
Q ss_pred CCCCCCCEEEEEecHHHH---hhhhHHHHHHhcCC
Q 026201 210 LEAGSPLRIGVLAKNAIL---TAGFYQEKLQHEDC 241 (241)
Q Consensus 210 ~~~~~~~rVGLLaT~~T~---~s~~Y~~~L~~~G~ 241 (241)
||+++..+... ...-|++.+++.|+
T Consensus 145 -------~iaii~~~~~~g~~~~~~~~~~l~~~G~ 172 (392)
T 3lkb_A 145 -------KVALVVHPSPFGRAPVEDARKAARELGL 172 (392)
T ss_dssp -------EEEEEECSSHHHHTTHHHHHHHHHHHTC
T ss_pred -------EEEEEEeCCchhhhHHHHHHHHHHHcCC
Confidence 99999876443 23457788877764
No 96
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=91.16 E-value=3.3 Score=35.78 Aligned_cols=75 Identities=13% Similarity=0.154 Sum_probs=45.1
Q ss_pred HHHHH-hCCcEEEEeCCchhhh-HHH--HhccCCCCeeecc-----------------------HHHHHHHHHhcCCCCC
Q 026201 159 VFLEK-AGARCIVMPCHLSHIW-HDE--VCKGCSVPFLHVS-----------------------ECVAKELKEANMKPLE 211 (241)
Q Consensus 159 ~~Le~-~Gad~IvIaCNTAH~~-~d~--l~~~~~vPil~Ii-----------------------d~t~~~i~~~~~k~~~ 211 (241)
+.|.. .+++.|+.|..+.... .-. +.+..++|+|... ..+++.+.+.|.|
T Consensus 66 ~~l~~~~~v~~iig~~~s~~~~~~~~~~~~~~~~iP~v~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~--- 142 (364)
T 3lop_A 66 RDMARVDNPVALLTVVGTANVEALMREGVLAEARLPLVGPATGASSMTTDPLVFPIKASYQQEIDKMITALVTIGVT--- 142 (364)
T ss_dssp HHHHHHSCEEEEECCCCHHHHHHHHHTTHHHHHTCCEESCSCCCGGGGSCTTEECCSCCHHHHHHHHHHHHHHTTCC---
T ss_pred HHHHhhcCcEEEEecCCCHHHHhhCchhhHHhcCCcEEEcccCcHhhccCCcEEEeCCChHHHHHHHHHHHHHcCCc---
Confidence 44555 4999998876654432 223 3344566666531 2455666655554
Q ss_pred CCCCCEEEEEecHHHH---hhhhHHHHHHhcCC
Q 026201 212 AGSPLRIGVLAKNAIL---TAGFYQEKLQHEDC 241 (241)
Q Consensus 212 ~~~~~rVGLLaT~~T~---~s~~Y~~~L~~~G~ 241 (241)
||++++.+... ...-|++.+++.|+
T Consensus 143 -----~iaii~~~~~~g~~~~~~~~~~~~~~G~ 170 (364)
T 3lop_A 143 -----RIGVLYQEDALGKEAITGVERTLKAHAL 170 (364)
T ss_dssp -----CEEEEEETTHHHHHHHHHHHHHHHTTTC
T ss_pred -----eEEEEEeCchhhHHHHHHHHHHHHHcCC
Confidence 99999864432 34557888887764
No 97
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=90.92 E-value=1.6 Score=36.50 Aligned_cols=126 Identities=12% Similarity=0.008 Sum_probs=67.9
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRR 156 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~ 156 (241)
.++||++=-- .+-.||..+.+...+. ....++++.... ..+.+... +
T Consensus 5 ~~~Igvi~~~---~~~~~~~~~~~g~~~~a~~~g~~~~~~~~~~-----------------------~~~~~~~~----~ 54 (304)
T 3o1i_D 5 DEKICAIYPH---LKDSYWLSVNYGMVSEAEKQGVNLRVLEAGG-----------------------YPNKSRQE----Q 54 (304)
T ss_dssp CCEEEEEESC---SCSHHHHHHHHHHHHHHHHHTCEEEEEECSS-----------------------TTCHHHHH----H
T ss_pred CcEEEEEeCC---CCCcHHHHHHHHHHHHHHHcCCeEEEEcCCC-----------------------CCCHHHHH----H
Confidence 5789988521 1235777777666542 345566544110 01222222 2
Q ss_pred HHHHHHHhCCcEEEEeCCchh---hhHHHHhccCCCCeeecc-------------------------HHHHHHHHHhcCC
Q 026201 157 KRVFLEKAGARCIVMPCHLSH---IWHDEVCKGCSVPFLHVS-------------------------ECVAKELKEANMK 208 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH---~~~d~l~~~~~vPil~Ii-------------------------d~t~~~i~~~~~k 208 (241)
.++.|...++|.|++...... ..++++. .++|+|-+- ..+++++.+.+.+
T Consensus 55 ~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~--~~iPvV~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g~~ 132 (304)
T 3o1i_D 55 QLALCTQWGANAIILGTVDPHAYEHNLKSWV--GNTPVFATVNQLDLDEEQSTLLKGEVGVDWYWMGYEAGKYLAERHPK 132 (304)
T ss_dssp HHHHHHHHTCSEEEECCSSTTSSTTTHHHHT--TTSCEEECSSCCCCCTTTGGGEEEECCCCHHHHHHHHHHHHHTTSBT
T ss_pred HHHHHHHcCCCEEEEeCCChhHHHHHHHHHc--CCCCEEEecCCCcccccCCCceEEEEecCHHHHHHHHHHHHHHhccc
Confidence 345677789998887655444 3456665 578877661 1245566665511
Q ss_pred CCCCCCCCEEEEEecHHH-----HhhhhHHHHHHhcC
Q 026201 209 PLEAGSPLRIGVLAKNAI-----LTAGFYQEKLQHED 240 (241)
Q Consensus 209 ~~~~~~~~rVGLLaT~~T-----~~s~~Y~~~L~~~G 240 (241)
.+..++|++++.+.. .+..-|++.+++.|
T Consensus 133 ---~~~~~~i~~i~~~~~~~~~~~R~~gf~~~l~~~~ 166 (304)
T 3o1i_D 133 ---GSGKTNIALLLGPRTRGGTKPVTTGFYEAIKNSD 166 (304)
T ss_dssp ---TTCCEEEEEECCCC-----CHHHHHHHHTTTTBT
T ss_pred ---CCCCCEEEEEECCCCcchHHHHHHHHHHHHhcCC
Confidence 111348999964321 12233666666555
No 98
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=90.84 E-value=1 Score=39.06 Aligned_cols=76 Identities=11% Similarity=0.113 Sum_probs=46.2
Q ss_pred HHHHHHHhCCcEEEEeCCch-hhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCCC
Q 026201 157 KRVFLEKAGARCIVMPCHLS-HIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSPL 216 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTA-H~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~~ 216 (241)
.++.|...++|.|++..... ....+.+++ .++|++-+ ...+++++.+.|.+
T Consensus 116 ~i~~l~~~~vdGiIi~~~~~~~~~~~~l~~-~~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~-------- 186 (344)
T 3kjx_A 116 VLYEMLSWRPSGVIIAGLEHSEAARAMLDA-AGIPVVEIMDSDGKPVDAMVGISHRRAGREMAQAILKAGYR-------- 186 (344)
T ss_dssp HHHHHHTTCCSEEEEECSCCCHHHHHHHHH-CSSCEEEEEECSSCCSSEEEEECHHHHHHHHHHHHHHHTCC--------
T ss_pred HHHHHHhCCCCEEEEECCCCCHHHHHHHHh-CCCCEEEEeCCCCCCCCCEEEECcHHHHHHHHHHHHHCCCC--------
Confidence 34567788999888765432 233444443 35666544 22456677777765
Q ss_pred EEEEEecHH----HH--hhhhHHHHHHhcCC
Q 026201 217 RIGVLAKNA----IL--TAGFYQEKLQHEDC 241 (241)
Q Consensus 217 rVGLLaT~~----T~--~s~~Y~~~L~~~G~ 241 (241)
|||+++.+. +. +..-|.+.++++|+
T Consensus 187 ~I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~ 217 (344)
T 3kjx_A 187 RIGFMGTKMPLDYRARKRFEGFTEVLGKNGV 217 (344)
T ss_dssp SCCEEESSTTTCHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEecCcccCccHHHHHHHHHHHHHHcCC
Confidence 899998642 22 23347888887764
No 99
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=90.53 E-value=3.4 Score=35.40 Aligned_cols=118 Identities=11% Similarity=0.081 Sum_probs=63.7
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC---C-CCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE---N-DFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~-~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
.++||++=.. +-.||..+.+...+. . ...++++... .+.+...
T Consensus 6 ~~~Igvi~~~----~~~~~~~~~~gi~~~a~~~~g~~l~i~~~~-------------------------~~~~~~~---- 52 (325)
T 2x7x_A 6 HFRIGVAQCS----DDSWRHKMNDEILREAMFYNGVSVEIRSAG-------------------------DDNSKQA---- 52 (325)
T ss_dssp CCEEEEEESC----CSHHHHHHHHHHHHHHTTSSSCEEEEEECT-------------------------TCHHHHH----
T ss_pred CeEEEEEecC----CCHHHHHHHHHHHHHHHHcCCcEEEEeCCC-------------------------CCHHHHH----
Confidence 5689998543 346777776665532 3 4566664411 1112222
Q ss_pred HHHHHHHHhCCcEEEEeCCchh---hhHHHHhccCCCCeeec--------------------cHHHHHHHHHh--cCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLSH---IWHDEVCKGCSVPFLHV--------------------SECVAKELKEA--NMKPL 210 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH---~~~d~l~~~~~vPil~I--------------------id~t~~~i~~~--~~k~~ 210 (241)
+.++.|...++|.|++...... ..++.+.+ .++|+|-+ ...+++++.+. |.+
T Consensus 53 ~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~~G~~-- 129 (325)
T 2x7x_A 53 EDVHYFMDEGVDLLIISANEAAPMTPIVEEAYQ-KGIPVILVDRKILSDKYTAYIGADNYEIGRSVGNYIASSLKGKG-- 129 (325)
T ss_dssp HHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH-TTCCEEEESSCCSSSCSSEEEEECHHHHHHHHHHHHHHHTTTEE--
T ss_pred HHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHH-CCCeEEEeCCCCCCcceeEEEecCHHHHHHHHHHHHHHHcCCCc--
Confidence 2334566789998887644332 23444432 34555432 22345566664 544
Q ss_pred CCCCCCEEEEEecHH-----HHhhhhHHHHHHhc
Q 026201 211 EAGSPLRIGVLAKNA-----ILTAGFYQEKLQHE 239 (241)
Q Consensus 211 ~~~~~~rVGLLaT~~-----T~~s~~Y~~~L~~~ 239 (241)
||++++.+. ..+..-|.+.++++
T Consensus 130 ------~I~~i~~~~~~~~~~~R~~Gf~~al~~~ 157 (325)
T 2x7x_A 130 ------NIVELTGLSGSTPAMERHQGFMAAISKF 157 (325)
T ss_dssp ------EEEEEESCTTSHHHHHHHHHHHHHHHTC
T ss_pred ------eEEEEECCCCCccHHHHHHHHHHHHHhC
Confidence 999997532 12234477777766
No 100
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=90.10 E-value=5.4 Score=33.51 Aligned_cols=125 Identities=14% Similarity=-0.009 Sum_probs=67.4
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRR 156 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~ 156 (241)
..+||++---- +-.||..+.+...+. ....++++... ...+.+... +
T Consensus 3 ~~~Igvi~~~~---~~~~~~~~~~gi~~~a~~~g~~~~~~~~~-----------------------~~~~~~~~~----~ 52 (297)
T 3rot_A 3 RDKYYLITHGS---QDPYWTSLFQGAKKAAEELKVDLQILAPP-----------------------GANDVPKQV----Q 52 (297)
T ss_dssp CCEEEEECSCC---CSHHHHHHHHHHHHHHHHHTCEEEEECCS-----------------------SSCCHHHHH----H
T ss_pred eEEEEEEecCC---CCchHHHHHHHHHHHHHHhCcEEEEECCC-----------------------CcCCHHHHH----H
Confidence 35899985322 345777776666542 34555554411 001222222 2
Q ss_pred HHHHHHHhCCcEEEEeCCchh---hhHHHHhccCCCCeeec-----------------------cHHHHHHHHHhcCCCC
Q 026201 157 KRVFLEKAGARCIVMPCHLSH---IWHDEVCKGCSVPFLHV-----------------------SECVAKELKEANMKPL 210 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH---~~~d~l~~~~~vPil~I-----------------------id~t~~~i~~~~~k~~ 210 (241)
.++.|...++|.|++...... ..++++++ .++|++-+ ...+++++.+.+.
T Consensus 53 ~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~-~giPvV~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~g~--- 128 (297)
T 3rot_A 53 FIESALATYPSGIATTIPSDTAFSKSLQRANK-LNIPVIAVDTRPKDKTKNPYLVFLGSDNLLAGKKLGEKALELTP--- 128 (297)
T ss_dssp HHHHHHHTCCSEEEECCCCSSTTHHHHHHHHH-HTCCEEEESCCCSCTTTSCCSCEEECCHHHHHHHHHHHHHHHCT---
T ss_pred HHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHH-CCCCEEEEcCCCccccccCcceEEccChHHHHHHHHHHHHHhcC---
Confidence 345677889998887544333 23444433 24444432 2356677777761
Q ss_pred CCCCCCEEEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 211 EAGSPLRIGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 211 ~~~~~~rVGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
..++|++++... ..+..-|++.++++|+
T Consensus 129 ---~~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~g~ 161 (297)
T 3rot_A 129 ---SAKRALVLNPQPGHIGLEKRAYGIKTILQDKGI 161 (297)
T ss_dssp ---TCCEEEEEESCTTCHHHHHHHHHHHHHHHHTTC
T ss_pred ---CCceEEEEeCCCCcHHHHHHHHHHHHHHHhcCC
Confidence 134999995431 2334557888877764
No 101
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=89.97 E-value=4.3 Score=34.82 Aligned_cols=74 Identities=12% Similarity=-0.050 Sum_probs=41.3
Q ss_pred HHHHHHhC--CcEEEEeCCchhh---hHHHHhccCCCCeeec---------------------------cHHHHHHHHH-
Q 026201 158 RVFLEKAG--ARCIVMPCHLSHI---WHDEVCKGCSVPFLHV---------------------------SECVAKELKE- 204 (241)
Q Consensus 158 ~~~Le~~G--ad~IvIaCNTAH~---~~d~l~~~~~vPil~I---------------------------id~t~~~i~~- 204 (241)
++.|...+ +|.|++....... .++.+.+ .++|++-+ ...+++++.+
T Consensus 54 i~~l~~~~~~vdgiIi~~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~ 132 (332)
T 2rjo_A 54 IRALLQKTGGNLVLNVDPNDSADARVIVEACSK-AGAYVTTIWNKPKDLHPWDYNPNYVAHLSYDGVAYGEETATQLFKS 132 (332)
T ss_dssp HHHHHHHTTTCEEEEECCSSHHHHHHHHHHHHH-HTCEEEEESCCCTTCCGGGGTTTEEEEEECCHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCCCEEEEeCCCHHHHHHHHHHHHH-CCCeEEEECCCCCcccchhcccceeEEEccChHHHHHHHHHHHHHH
Confidence 34566678 9988876544332 3344432 24454422 2335566666
Q ss_pred -hcCCCCCCCCCCEEEEEecHH-----HHhhhhHHHHHHhc-C
Q 026201 205 -ANMKPLEAGSPLRIGVLAKNA-----ILTAGFYQEKLQHE-D 240 (241)
Q Consensus 205 -~~~k~~~~~~~~rVGLLaT~~-----T~~s~~Y~~~L~~~-G 240 (241)
.|.+ ||++++.+. ..+..-|.+.++++ |
T Consensus 133 ~~G~~--------~I~~i~g~~~~~~~~~R~~Gf~~al~~~pg 167 (332)
T 2rjo_A 133 MGGKG--------GVVALGGIFSNVPAIERKAGLDAALKKFPG 167 (332)
T ss_dssp TTTCE--------EEEEEECCTTCHHHHHHHHHHHHHHHTCTT
T ss_pred cCCCC--------eEEEEECCCCCccHHHHHHHHHHHHHhCCC
Confidence 4544 999997541 12333477888776 5
No 102
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=89.93 E-value=5.4 Score=33.05 Aligned_cols=75 Identities=11% Similarity=0.029 Sum_probs=42.1
Q ss_pred HHHHHHhCCcEEEEeCCchhhhHHHHhc--cCCCCeeec--------------------cHHHHHHHHHh-c-CCCCCCC
Q 026201 158 RVFLEKAGARCIVMPCHLSHIWHDEVCK--GCSVPFLHV--------------------SECVAKELKEA-N-MKPLEAG 213 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH~~~d~l~~--~~~vPil~I--------------------id~t~~~i~~~-~-~k~~~~~ 213 (241)
++.|.+.++|.|++.......+.+.++. ..++|++-+ ...+++++.+. | .+
T Consensus 58 ~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~~~~~L~~~~G~~~----- 132 (289)
T 3brs_A 58 IEEAIKRKPDVILLAAADYEKTYDAAKEIKDAGIKLIVIDSGMKQDIADITVATDNIQAGIRIGAVTKNLVRKSG----- 132 (289)
T ss_dssp HHHHHHTCCSEEEECCSCTTTTHHHHTTTGGGTCEEEEESSCCSSCCCSEEEECCHHHHHHHHHHHHHHHTSSSC-----
T ss_pred HHHHHHhCCCEEEEeCCChHHhHHHHHHHHHCCCcEEEECCCCCCCcceEEEeeChHHHHHHHHHHHHHHcCCCc-----
Confidence 3567778999888865544332222322 134555432 23455666665 4 44
Q ss_pred CCCEEEEEecHH-----HHhhhhHHHHHHhcC
Q 026201 214 SPLRIGVLAKNA-----ILTAGFYQEKLQHED 240 (241)
Q Consensus 214 ~~~rVGLLaT~~-----T~~s~~Y~~~L~~~G 240 (241)
||++++.+. ..+..-|++.++++|
T Consensus 133 ---~i~~i~~~~~~~~~~~R~~gf~~~l~~~g 161 (289)
T 3brs_A 133 ---KIGVISFVKNSKTAMDREEGLKIGLSDDS 161 (289)
T ss_dssp ---EEEEEESCTTSHHHHHHHHHHHHHHGGGG
T ss_pred ---eEEEEECCCCCccHHHHHHHHHHHHHhCC
Confidence 999997531 123344777777665
No 103
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=89.89 E-value=6.2 Score=34.32 Aligned_cols=75 Identities=9% Similarity=-0.014 Sum_probs=45.2
Q ss_pred HHHH-HhCCcEEEEeCCchhhh-HHHHhccCCCCeeec--------------------------cHHHHHHHHHhcCCCC
Q 026201 159 VFLE-KAGARCIVMPCHLSHIW-HDEVCKGCSVPFLHV--------------------------SECVAKELKEANMKPL 210 (241)
Q Consensus 159 ~~Le-~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~I--------------------------id~t~~~i~~~~~k~~ 210 (241)
+.|. +.|++.|+-|..+.... .-.+.+..++|+|.. ...+++.+.+.+.+
T Consensus 66 ~~li~~~~v~~iiG~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~-- 143 (379)
T 3n0w_A 66 REWFDRDGVDAIFDVVNSGTALAINNLVKDKKKLAFITAAAADQIGGTECNGYGIGFLYNFTSIVKTVVQAQLAKGYK-- 143 (379)
T ss_dssp HHHHHHSCCCEEEECCCHHHHHHHHHHHHHHTCEEEECSCCCTTTTTTTCCSSEEECSCCHHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHhCCceEEEcCCCcHHHHHHHHHHHHcCceEEEcCCCchhhhcccCCCcEEEEeCChHHHHHHHHHHHHHcCCc--
Confidence 3444 48999998877655443 233334445666553 23445566665544
Q ss_pred CCCCCCEEEEEecHHHH---hhhhHHHHHHhcCC
Q 026201 211 EAGSPLRIGVLAKNAIL---TAGFYQEKLQHEDC 241 (241)
Q Consensus 211 ~~~~~~rVGLLaT~~T~---~s~~Y~~~L~~~G~ 241 (241)
||+++..+... ....|++.+++.|+
T Consensus 144 ------~vaii~~~~~~g~~~~~~~~~~~~~~G~ 171 (379)
T 3n0w_A 144 ------TWFLMLPDAAYGDLMNAAIRRELTAGGG 171 (379)
T ss_dssp ------EEEEEEESSHHHHHHHHHHHHHHHHHTC
T ss_pred ------EEEEEecccchhHHHHHHHHHHHHHcCC
Confidence 99999865432 24557777877763
No 104
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=89.77 E-value=5.3 Score=34.60 Aligned_cols=75 Identities=7% Similarity=0.019 Sum_probs=46.1
Q ss_pred HHHH-HhCCcEEEEeCCchhhh-HHHHhccCCCCeeec--------------------------cHHHHHHHHHhcCCCC
Q 026201 159 VFLE-KAGARCIVMPCHLSHIW-HDEVCKGCSVPFLHV--------------------------SECVAKELKEANMKPL 210 (241)
Q Consensus 159 ~~Le-~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~I--------------------------id~t~~~i~~~~~k~~ 210 (241)
+.|. +.|++.|+-|..+.... .-.+.+..++|+|.. ...+++.+.+.+.+
T Consensus 64 ~~li~~~~v~~iiG~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g~~-- 141 (375)
T 3i09_A 64 REWMDRGGLDLLVGGTNSATALSMNQVAAEKKKVYINIGAGADTLTNEQCTPYTVHYAYDTMALAKGTGSAVVKQGGK-- 141 (375)
T ss_dssp HHHHHHSCEEEEEECSCHHHHHHHHHHHHHHTCEEEECSCCCGGGGTTTCCTTEEECSCCHHHHHHHHHHHHHHTTCC--
T ss_pred HHHHhhCCCEEEECCCCcHHHHHHHHHHHHcCceEEEeCCCchhhhcccCCCcEEEeeCChHHHHHHHHHHHHHcCCc--
Confidence 3444 48999999887665543 233444456666653 12345556665544
Q ss_pred CCCCCCEEEEEecHHHH---hhhhHHHHHHhcCC
Q 026201 211 EAGSPLRIGVLAKNAIL---TAGFYQEKLQHEDC 241 (241)
Q Consensus 211 ~~~~~~rVGLLaT~~T~---~s~~Y~~~L~~~G~ 241 (241)
||+++..+... ....|++.+++.|+
T Consensus 142 ------~vaii~~~~~~g~~~~~~~~~~~~~~G~ 169 (375)
T 3i09_A 142 ------TWFFLTADYAFGKALEKNTADVVKANGG 169 (375)
T ss_dssp ------EEEEEEESSHHHHHHHHHHHHHHHHTTC
T ss_pred ------eEEEEecccHHHHHHHHHHHHHHHHcCC
Confidence 99999865543 34557788887764
No 105
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=89.68 E-value=5.3 Score=33.69 Aligned_cols=77 Identities=12% Similarity=0.138 Sum_probs=42.8
Q ss_pred HHHHHHhCCcEEEEeCCch---hhhHHHHhccCCCCeeec-----------------------cHHHHHHHHHhcCCCCC
Q 026201 158 RVFLEKAGARCIVMPCHLS---HIWHDEVCKGCSVPFLHV-----------------------SECVAKELKEANMKPLE 211 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTA---H~~~d~l~~~~~vPil~I-----------------------id~t~~~i~~~~~k~~~ 211 (241)
++.|...++|.|++..... ...++.+++ .++|+|-+ ...+++++.+.|.
T Consensus 51 i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~g~---- 125 (306)
T 2vk2_A 51 VRSFVAQGVDAIFIAPVVATGWEPVLKEAKD-AEIPVFLLDRSIDVKDKSLYMTTVTADNILEGKLIGDWLVKEVN---- 125 (306)
T ss_dssp HHHHHHHTCSEEEECCSSSSSCHHHHHHHHH-TTCCEEEESSCCCCSCGGGSSEEEECCHHHHHHHHHHHHHHHHT----
T ss_pred HHHHHHcCCCEEEEeCCChhhHHHHHHHHHH-CCCCEEEecCCCCCCCccceEEEEecCHHHHHHHHHHHHHHhcC----
Confidence 3566778999888755432 234455543 34554432 1245566777651
Q ss_pred CCCCCEEEEEecHH---H--HhhhhHHHHHHhcC
Q 026201 212 AGSPLRIGVLAKNA---I--LTAGFYQEKLQHED 240 (241)
Q Consensus 212 ~~~~~rVGLLaT~~---T--~~s~~Y~~~L~~~G 240 (241)
++.+||++++.+. + .+..-|++.++++|
T Consensus 126 -g~~~~I~~i~~~~~~~~~~~R~~Gf~~al~~~g 158 (306)
T 2vk2_A 126 -GKPCNVVELQGTVGASVAIDRKKGFAEAIKNAP 158 (306)
T ss_dssp -TSCEEEEEEECSTTCHHHHHHHHHHHHHTTTCT
T ss_pred -CCCCeEEEEEcCCCChhHHHHHHHHHHHHhhCC
Confidence 0123999997542 1 22334777777665
No 106
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=88.73 E-value=5.6 Score=34.52 Aligned_cols=75 Identities=15% Similarity=0.072 Sum_probs=42.6
Q ss_pred HHHHHHhCCcEEEEe-CCchhh-hHHHHhccCCCCeeec------------------cHHHHHHHHHhcCCCCCCCCCCE
Q 026201 158 RVFLEKAGARCIVMP-CHLSHI-WHDEVCKGCSVPFLHV------------------SECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 158 ~~~Le~~Gad~IvIa-CNTAH~-~~d~l~~~~~vPil~I------------------id~t~~~i~~~~~k~~~~~~~~r 217 (241)
++.|...++|.|++. +..... ....+. ..++|++-+ ...+++++.+.|.+ |
T Consensus 111 l~~l~~~~vdGiIi~~~~~~~~~~~~~~~-~~~iPvV~i~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~~--------~ 181 (349)
T 1jye_A 111 VHNLLAQRVSGLIINYPLDDQDAIAVEAA-CTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGHQ--------Q 181 (349)
T ss_dssp HHHHHTTTCSCEEEESCCCHHHHHHHHHH-TTTSCEEESSSCTTSSSCEEEECHHHHHHHHHHHHHHHTCC--------S
T ss_pred HHHHHHCCCCEEEEecCCCChhHHHHHHh-hCCCCEEEEcccCCCCCCEEEEchHHHHHHHHHHHHHCCCC--------E
Confidence 345677899988875 332222 222222 245666543 12345667777655 9
Q ss_pred EEEEecHH---H--HhhhhHHHHHHhcCC
Q 026201 218 IGVLAKNA---I--LTAGFYQEKLQHEDC 241 (241)
Q Consensus 218 VGLLaT~~---T--~~s~~Y~~~L~~~G~ 241 (241)
||+++.+. + .+..-|.+.++++|+
T Consensus 182 I~~i~g~~~~~~~~~R~~Gf~~al~~~gi 210 (349)
T 1jye_A 182 IALLAGPLSSVSARLRLAGWHKYLTRNQI 210 (349)
T ss_dssp EEEEECCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCCCCccHHHHHHHHHHHHHHcCC
Confidence 99997542 1 122347888887764
No 107
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=87.69 E-value=5 Score=33.45 Aligned_cols=74 Identities=14% Similarity=0.052 Sum_probs=40.7
Q ss_pred HHHHHHhCCcEEEEeCCchh---hhHHHHhccCCCCeeec--------------------cHHHHHHHHHh-c-CCCCCC
Q 026201 158 RVFLEKAGARCIVMPCHLSH---IWHDEVCKGCSVPFLHV--------------------SECVAKELKEA-N-MKPLEA 212 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH---~~~d~l~~~~~vPil~I--------------------id~t~~~i~~~-~-~k~~~~ 212 (241)
++.|...++|.|++...... ..++.+++ .++|++-+ ...+++++.+. | .+
T Consensus 50 i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~gg~~---- 124 (283)
T 2ioy_A 50 VEDLIQQKVDVLLINPVDSDAVVTAIKEANS-KNIPVITIDRSANGGDVVCHIASDNVKGGEMAAEFIAKALKGKG---- 124 (283)
T ss_dssp HHHHHHTTCSEEEECCSSTTTTHHHHHHHHH-TTCCEEEESSCCSSSCCSEEEEECHHHHHHHHHHHHHHHTTTCE----
T ss_pred HHHHHHcCCCEEEEeCCchhhhHHHHHHHHH-CCCeEEEecCCCCCcceeEEEecChHHHHHHHHHHHHHHcCCCc----
Confidence 34566889998887443322 23344432 34554422 22345666665 3 43
Q ss_pred CCCCEEEEEecHH-----HHhhhhHHHHHHhc-C
Q 026201 213 GSPLRIGVLAKNA-----ILTAGFYQEKLQHE-D 240 (241)
Q Consensus 213 ~~~~rVGLLaT~~-----T~~s~~Y~~~L~~~-G 240 (241)
||++++.+. ..+..-|++.|+++ |
T Consensus 125 ----~I~~i~g~~~~~~~~~R~~Gf~~al~~~~~ 154 (283)
T 2ioy_A 125 ----NVVELEGIPGASAARDRGKGFDEAIAKYPD 154 (283)
T ss_dssp ----EEEEEECCTTCHHHHHHHHHHHHHHTTCTT
T ss_pred ----eEEEEECCCCCccHHHHHHHHHHHHHhCCC
Confidence 999997431 12233477888776 5
No 108
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=87.63 E-value=1.3 Score=39.94 Aligned_cols=105 Identities=16% Similarity=0.130 Sum_probs=63.8
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC--CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRK 157 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d--~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~ 157 (241)
.|+-|-++|---....++.+||.....+. ..++++|.-..+. +.. .. +-+.+. -
T Consensus 120 ~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa---~~~-----------------~g---ldeAi~-R 175 (302)
T 3fa4_A 120 TKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDS---LQT-----------------HG---YEESVA-R 175 (302)
T ss_dssp C-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECC---HHH-----------------HC---HHHHHH-H
T ss_pred CcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecc---ccc-----------------CC---HHHHHH-H
Confidence 57778887776777889999998888754 2466666542221 000 01 222233 2
Q ss_pred HHHHHHhCCcEEEEeCCchhhhHHHHhccC-CCCe-eeccHH------HHHHHHHhcCC
Q 026201 158 RVFLEKAGARCIVMPCHLSHIWHDEVCKGC-SVPF-LHVSEC------VAKELKEANMK 208 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~-~vPi-l~Iid~------t~~~i~~~~~k 208 (241)
++...++|||+|-+++-+.-.-+.++.+.+ ++|+ ++|++. +.+++.+.|.+
T Consensus 176 a~ay~eAGAD~ifi~g~~~~~ei~~~~~~~~~~Pl~~n~~~~g~~p~~~~~eL~~lGv~ 234 (302)
T 3fa4_A 176 LRAARDAGADVGFLEGITSREMARQVIQDLAGWPLLLNMVEHGATPSISAAEAKEMGFR 234 (302)
T ss_dssp HHHHHTTTCSEEEETTCCCHHHHHHHHHHTTTSCEEEECCTTSSSCCCCHHHHHHHTCS
T ss_pred HHHHHHcCCCEEeecCCCCHHHHHHHHHHhcCCceeEEEecCCCCCCCCHHHHHHcCCC
Confidence 345578999999999976555567777777 4786 576642 57899999875
No 109
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=87.47 E-value=0.65 Score=39.62 Aligned_cols=55 Identities=20% Similarity=0.231 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHh
Q 026201 149 LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 149 ~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~ 205 (241)
...+.+.+.++.|.+.|+|.||+.|-=.-...+++. .++|+++-.+.+++++.+.
T Consensus 174 ~~~~~~~~~~~~l~~~g~d~vILGCTe~pll~~~~~--~~v~viDs~~~~A~~~v~~ 228 (231)
T 3ojc_A 174 TSRDAYRRVIKKLEAQGVQGIIFGCTEITLLVNAQD--ASVPVFDTTAIHASAAADY 228 (231)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEECSGGGGGTCCGGG--CSSCEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCEEEECCCCHHHhccccc--CCCcEEchHHHHHHHHHHH
Confidence 345566777788888999999999974444446554 6799999999888887764
No 110
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=87.41 E-value=9.5 Score=33.20 Aligned_cols=73 Identities=15% Similarity=0.074 Sum_probs=43.4
Q ss_pred HHHHH-hCCcEEEEeCCchhhh-HHHHhccCCCCeeecc--------------------------HHHHHHHHHhcCCCC
Q 026201 159 VFLEK-AGARCIVMPCHLSHIW-HDEVCKGCSVPFLHVS--------------------------ECVAKELKEANMKPL 210 (241)
Q Consensus 159 ~~Le~-~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~Ii--------------------------d~t~~~i~~~~~k~~ 210 (241)
+.|.. .|++.|+-|..+.... .-.+.+..++|+|... ...++.+.+.+
T Consensus 66 ~~li~~~~v~aiiG~~~s~~~~a~~~~~~~~~ip~i~~~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~l~~~g---- 141 (387)
T 3i45_A 66 QELLTRHGVHALAGTFLSHVGLAVSDFARQRKVLFMASEPLTDALTWEKGNRYTYRLRPSTYMQAAMLAAEAAKLP---- 141 (387)
T ss_dssp HHHHHHHCCSEEEECCSHHHHHHHHHHHHHHTCCEEECSCCCGGGTTTTCCTTEEECSCCHHHHHHHHHHHHTTSS----
T ss_pred HHHHHhcCCEEEECCcchHHHHHHHHHHHHcCceEEecCCCchhhhhccCCCCEEEeCCChHHHHHHHHHHHHHcC----
Confidence 34544 6999999987765543 3444455678877631 12333333333
Q ss_pred CCCCCCEEEEEecHHHH---hhhhHHHHHHhc
Q 026201 211 EAGSPLRIGVLAKNAIL---TAGFYQEKLQHE 239 (241)
Q Consensus 211 ~~~~~~rVGLLaT~~T~---~s~~Y~~~L~~~ 239 (241)
.+||+++..+... ....|++.+++.
T Consensus 142 ----~~~vaii~~~~~~g~~~~~~~~~~l~~~ 169 (387)
T 3i45_A 142 ----ITRWATIAPNYEYGQSAVARFKELLLAA 169 (387)
T ss_dssp ----CCEEEEECCSSHHHHHHHHHHHHHHHHH
T ss_pred ----CCeEEEEeCCchHhHHHHHHHHHHHHHh
Confidence 3599999865432 234577777766
No 111
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=87.36 E-value=4 Score=33.79 Aligned_cols=77 Identities=9% Similarity=0.040 Sum_probs=42.0
Q ss_pred HHHHHHhCCcEEEEeCCchhh---hHHHHhccCCCCeeec--------------------cHHHHHHHHHhcCCCCCCCC
Q 026201 158 RVFLEKAGARCIVMPCHLSHI---WHDEVCKGCSVPFLHV--------------------SECVAKELKEANMKPLEAGS 214 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH~---~~d~l~~~~~vPil~I--------------------id~t~~~i~~~~~k~~~~~~ 214 (241)
++.|...++|.|++....... ..+++++ .++|++-+ ...+++++.+.+. +
T Consensus 50 i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~-~~iPvV~i~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~g~------g 122 (271)
T 2dri_A 50 VQDLTVRGTKILLINPTDSDAVGNAVKMANQ-ANIPVITLDRQATKGEVVSHIASDNVLGGKIAGDYIAKKAG------E 122 (271)
T ss_dssp HHHHTTTTEEEEEECCSSTTTTHHHHHHHHH-TTCCEEEESSCCSSSCCSEEEEECHHHHHHHHHHHHHHHHC------T
T ss_pred HHHHHHcCCCEEEEeCCChHHHHHHHHHHHH-CCCcEEEecCCCCCCceeEEEecChHHHHHHHHHHHHHHcC------C
Confidence 345667889988775433222 2344433 34555432 1234566766642 1
Q ss_pred CCEEEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 215 PLRIGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 215 ~~rVGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
.+||++++.+. ..+..-|++.+++.|+
T Consensus 123 ~~~I~~i~g~~~~~~~~~R~~Gf~~al~~~g~ 154 (271)
T 2dri_A 123 GAKVIELQGIAGTSAARERGEGFQQAVAAHKF 154 (271)
T ss_dssp TCEEEEEECCTTCHHHHHHHHHHHHHHHHHTC
T ss_pred CCeEEEEECCCCCccHhHHHHHHHHHHhcCCC
Confidence 24999997431 2233447888877664
No 112
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=87.13 E-value=0.77 Score=40.71 Aligned_cols=99 Identities=19% Similarity=0.211 Sum_probs=61.4
Q ss_pred ChHHHHHHHHHHHHHhccC--CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCC-H-HHHHHHHHHHHHHHHHhC
Q 026201 90 SVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLD-D-SLIVENLRRKRVFLEKAG 165 (241)
Q Consensus 90 Gp~AT~~fy~kI~~~t~~d--~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d-~-~~i~~~l~~~~~~Le~~G 165 (241)
.-..+.++.++|.....+. ..++++|.-..+ .+.. ..+. + +.+.+.+ +.++.++++|
T Consensus 121 ~l~~~~e~~~~I~aa~~a~~~~g~~~~i~aRtd---a~~~---------------~~g~~~~~~~~~ai-~Ra~ay~eAG 181 (275)
T 2ze3_A 121 ELYDLDSQLRRIEAARAAIDASGVPVFLNARTD---TFLK---------------GHGATDEERLAETV-RRGQAYADAG 181 (275)
T ss_dssp CBCCHHHHHHHHHHHHHHHHHHTSCCEEEEECC---TTTT---------------TCSSSHHHHHHHHH-HHHHHHHHTT
T ss_pred ccCCHHHHHHHHHHHHHhHhhcCCCeEEEEech---hhhc---------------cccccchhhHHHHH-HHHHHHHHCC
Confidence 3455667888888887764 245666543111 0000 0000 1 2233333 4456788999
Q ss_pred CcEEEEeCCchhhhHHHHhccCCCCeeeccH----HHHHHHHHhcCC
Q 026201 166 ARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE----CVAKELKEANMK 208 (241)
Q Consensus 166 ad~IvIaCNTAH~~~d~l~~~~~vPil~Iid----~t~~~i~~~~~k 208 (241)
||+|+++|-+.-..+.++.+.+++|+ +++. .+.+++.+.|.+
T Consensus 182 Ad~i~~e~~~~~~~~~~i~~~~~~P~-n~~~~~~~~~~~eL~~lGv~ 227 (275)
T 2ze3_A 182 ADGIFVPLALQSQDIRALADALRVPL-NVMAFPGSPVPRALLDAGAA 227 (275)
T ss_dssp CSEEECTTCCCHHHHHHHHHHCSSCE-EEECCTTSCCHHHHHHTTCS
T ss_pred CCEEEECCCCCHHHHHHHHHhcCCCE-EEecCCCCCCHHHHHHcCCc
Confidence 99999999654466788889999996 4432 357899999875
No 113
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=87.11 E-value=0.59 Score=39.29 Aligned_cols=52 Identities=17% Similarity=0.168 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHH-hCCcEEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHh
Q 026201 152 ENLRRKRVFLEK-AGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 152 ~~l~~~~~~Le~-~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~ 205 (241)
+.+.+.++.|.+ .|+|.|++.|--...+.+++ ..++|+++-.+.+++++.+.
T Consensus 171 ~~l~~~~~~l~~~~g~d~iiLGCT~~p~l~~~~--~~~vpviDs~~~~a~~~~~~ 223 (226)
T 2zsk_A 171 EWIVRLIEKYRESEGIEGVILGCTELPLAIKQG--DVSVEVFDSAEIHMRKLIEL 223 (226)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECSSSGGGTCCGG--GSSSEEEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcCCCEEEECCCCHHHHhhcc--CCCCcEEChHHHHHHHHHHH
Confidence 345555567777 89999999998666665655 46799999988888887653
No 114
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=86.77 E-value=4.4 Score=34.77 Aligned_cols=119 Identities=13% Similarity=0.186 Sum_probs=64.0
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+.++||++-.- .+-.||..+.+...+. ....+++++.. .+.+...
T Consensus 59 ~~~~Igvi~~~---~~~~~~~~~~~gi~~~~~~~g~~~~~~~~~-------------------------~~~~~~~---- 106 (330)
T 3ctp_A 59 NSKTIGLMVPN---ISNPFFNQMASVIEEYAKNKGYTLFLCNTD-------------------------DDKEKEK---- 106 (330)
T ss_dssp -CCEEEEEESC---TTSHHHHHHHHHHHHHHHHTTCEEEEEECT-------------------------TCHHHHH----
T ss_pred CCCEEEEEeCC---CCCcHHHHHHHHHHHHHHHCCCEEEEEeCC-------------------------CChHHHH----
Confidence 35789998532 1235777776666542 34455554311 1122222
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec------------------cHHHHHHHHHhcCCCCCCCCCCE
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV------------------SECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I------------------id~t~~~i~~~~~k~~~~~~~~r 217 (241)
+.++.|...++|.|+++++... +.++ ..++|++-+ ...+++++.+.|.+ |
T Consensus 107 ~~~~~l~~~~vdgiI~~~~~~~---~~l~-~~~iPvV~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~--------~ 174 (330)
T 3ctp_A 107 TYLEVLQSHRVAGIIASRSQCE---DEYA-NIDIPVVAFENHILDNIITISSDNYNGGRMAFDHLYEKGCR--------K 174 (330)
T ss_dssp HHHHHHHHTTCSEEEEETCCCS---GGGT-TCCSCEEEESSCCCTTSCEEEECHHHHHHHHHHHHHHTTCC--------S
T ss_pred HHHHHHHhCCCCEEEECCCCCH---HHHH-hcCCCEEEEeccCCCCCCEEEeCHHHHHHHHHHHHHHCCCC--------e
Confidence 2335677889998884433221 2233 345665532 12355666666654 9
Q ss_pred EEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 218 IGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 218 VGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
|++++.+. ..+..-|.+.++++|+
T Consensus 175 I~~i~~~~~~~~~~~R~~Gf~~al~~~g~ 203 (330)
T 3ctp_A 175 ILHIKGPEVFEATELRYKGFLDGARAKDL 203 (330)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEeCCccCccHHHHHHHHHHHHHHcCC
Confidence 99997542 1233447888888774
No 115
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=86.65 E-value=1.4 Score=39.27 Aligned_cols=106 Identities=14% Similarity=0.172 Sum_probs=61.8
Q ss_pred CCeEEEEe--CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHH
Q 026201 80 ANTVGIVG--GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRK 157 (241)
Q Consensus 80 ~k~IGIIG--GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~ 157 (241)
.|+.|-+| |-.-....++.++|.....+....+++|.-..+ ..+ .....++ +.+.
T Consensus 115 ~k~cgH~~~~~k~l~p~~e~~~kI~Aa~~a~~~~~~~i~aRtd---a~~----------------a~~g~~~----ai~R 171 (290)
T 2hjp_A 115 PKDTSLRTDGRQELVRIEEFQGKIAAATAARADRDFVVIARVE---ALI----------------AGLGQQE----AVRR 171 (290)
T ss_dssp SCCC-------CCBCCHHHHHHHHHHHHHHCSSTTSEEEEEEC---TTT----------------TTCCHHH----HHHH
T ss_pred CccccccccCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeeh---Hhh----------------ccccHHH----HHHH
Confidence 46667776 444555668888888887765224555533110 000 0111222 2334
Q ss_pred HHHHHHhCCcEEEEeC-CchhhhHHHHhccCC--CCee-ecc---HHHHHHHHHhc-CC
Q 026201 158 RVFLEKAGARCIVMPC-HLSHIWHDEVCKGCS--VPFL-HVS---ECVAKELKEAN-MK 208 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaC-NTAH~~~d~l~~~~~--vPil-~Ii---d~t~~~i~~~~-~k 208 (241)
++.++++|||+|++.| -..-..+.++.+.++ +|++ ++. ..+.+++.+.| .+
T Consensus 172 a~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~vP~i~n~~~~~~~~~~eL~~lG~v~ 230 (290)
T 2hjp_A 172 GQAYEEAGADAILIHSRQKTPDEILAFVKSWPGKVPLVLVPTAYPQLTEADIAALSKVG 230 (290)
T ss_dssp HHHHHHTTCSEEEECCCCSSSHHHHHHHHHCCCSSCEEECGGGCTTSCHHHHHTCTTEE
T ss_pred HHHHHHcCCcEEEeCCCCCCHHHHHHHHHHcCCCCCEEEeccCCCCCCHHHHHhcCCee
Confidence 4678899999999999 654455688888888 9977 332 24678888887 63
No 116
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=86.47 E-value=1.3 Score=38.12 Aligned_cols=75 Identities=13% Similarity=0.082 Sum_probs=42.2
Q ss_pred HHHHHHhCCcEEEEeCCc-hhhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCCCE
Q 026201 158 RVFLEKAGARCIVMPCHL-SHIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNT-AH~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~~r 217 (241)
++.|...++|.|++.... ....++.+.+ .++|++-+ ...+++++.+.|.+ |
T Consensus 109 ~~~l~~~~vdgiI~~~~~~~~~~~~~l~~-~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~--------~ 179 (332)
T 2hsg_A 109 LNNMLGKQVDGIIFMSGNVTEEHVEELKK-SPVPVVLAASIESTNQIPSVTIDYEQAAFDAVQSLIDSGHK--------N 179 (332)
T ss_dssp HHHTSCCSSCCEEECCSSCCHHHHHHHTT-SSSCEEEESCCCSCTTSCEEEECHHHHHHHHHHHHHTTTCS--------C
T ss_pred HHHHHhCCCcEEEEecCCCCHHHHHHHHh-CCCCEEEEccccCCCCCCEEEEChHHHHHHHHHHHHHCCCC--------E
Confidence 345667788877765432 2234455543 35665533 22345566665544 9
Q ss_pred EEEEecHH----HH--hhhhHHHHHHhcCC
Q 026201 218 IGVLAKNA----IL--TAGFYQEKLQHEDC 241 (241)
Q Consensus 218 VGLLaT~~----T~--~s~~Y~~~L~~~G~ 241 (241)
||+++.+. +. +..-|++.++++|+
T Consensus 180 I~~i~~~~~~~~~~~~R~~Gf~~al~~~g~ 209 (332)
T 2hsg_A 180 IAFVSGTLEEPINHAKKVKGYKRALTESGL 209 (332)
T ss_dssp EEEEESCTTSHHHHTTHHHHHHHHHHTTTC
T ss_pred EEEEeCCcccCccHHHHHHHHHHHHHHcCC
Confidence 99997653 11 22347888887774
No 117
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=86.38 E-value=2.4 Score=38.11 Aligned_cols=115 Identities=10% Similarity=0.072 Sum_probs=63.4
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRR 156 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~ 156 (241)
.++|||+=. .+-.||..+.+...+. ....++++.... . . +
T Consensus 25 s~~Igvv~~----~~~~f~~~l~~gi~~~a~~~g~~~~i~~~~~-----------~---------------~-------~ 67 (412)
T 4fe7_A 25 RHRITLLFN----ANKAYDRQVVEGVGEYLQASQSEWDIFIEED-----------F---------------R-------A 67 (412)
T ss_dssp CEEEEEECC----TTSHHHHHHHHHHHHHHHHHTCCEEEEECC------------C---------------C--------
T ss_pred CceEEEEeC----CcchhhHHHHHHHHHHHHhcCCCeEEEecCC-----------c---------------c-------c
Confidence 468999963 3456777777776642 344555544110 0 0 0
Q ss_pred HHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec-----------------------cHHHHHHHHHhcCCCCCCC
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV-----------------------SECVAKELKEANMKPLEAG 213 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I-----------------------id~t~~~i~~~~~k~~~~~ 213 (241)
.++.|...++|.|++.... ....+.+.+ .++|+|-+ ...+++++.+.|.+
T Consensus 68 ~i~~l~~~~vDGiIi~~~~-~~~~~~l~~-~~iPvV~i~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~r----- 140 (412)
T 4fe7_A 68 RIDKIKDWLGDGVIADFDD-KQIEQALAD-VDVPIVGVGGSYHLAESYPPVHYIATDNYALVESAFLHLKEKGVN----- 140 (412)
T ss_dssp -------CCCSEEEEETTC-HHHHHHHTT-CCSCEEEEEECCSSGGGSCSSEEEEECHHHHHHHHHHHHHHTTCC-----
T ss_pred hhhhHhcCCCCEEEEecCC-hHHHHHHhh-CCCCEEEecCCccccccCCCCCEEEeCHHHHHHHHHHHHHHcCCc-----
Confidence 1245678899999884332 223344443 46776643 12356677777665
Q ss_pred CCCEEEEEecHH-------HHhhhhHHHHHHhcCC
Q 026201 214 SPLRIGVLAKNA-------ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 214 ~~~rVGLLaT~~-------T~~s~~Y~~~L~~~G~ 241 (241)
+||+++.+. ..+..-|.+.++++|+
T Consensus 141 ---~I~~i~~~~~~~~~~~~~R~~Gf~~al~~~g~ 172 (412)
T 4fe7_A 141 ---RFAFYGLPESSGKRWATEREYAFRQLVAEEKY 172 (412)
T ss_dssp ---EEEEECCCTTSCCHHHHHHHHHHHHHHTTSSS
T ss_pred ---eEEEecccccccccHHHHHHHHHHHHHHHcCC
Confidence 999998653 2234447888887763
No 118
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=86.31 E-value=2.9 Score=34.95 Aligned_cols=121 Identities=8% Similarity=0.030 Sum_probs=63.3
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCC-EEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFP-FLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENL 154 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~-~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l 154 (241)
+.++||++=.- .+-.||..+.+...+. .... +++++. ..+.+...
T Consensus 9 ~~~~Igvi~~~---~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~-------------------------~~~~~~~~--- 57 (277)
T 3hs3_A 9 KSKMIGIIIPD---LNNRFYAQIIDGIQEVIQKEGYTALISFST-------------------------NSDVKKYQ--- 57 (277)
T ss_dssp CCCEEEEEESC---TTSHHHHHHHHHHHHHHHHTTCEEEEEECS-------------------------SCCHHHHH---
T ss_pred CCCEEEEEeCC---CCChhHHHHHHHHHHHHHHCCCCEEEEEeC-------------------------CCChHHHH---
Confidence 35789998532 2235777777766643 4555 555441 11222222
Q ss_pred HHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH---------------HHHHHHHhcCCCCCCCCCCEEE
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC---------------VAKELKEANMKPLEAGSPLRIG 219 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~---------------t~~~i~~~~~k~~~~~~~~rVG 219 (241)
+.++.|...++|.|++.. ..++++. ..++|++-+-.. ..+.+.+. + - ...+|||
T Consensus 58 -~~~~~l~~~~vdgiIi~~----~~~~~~~-~~~iPvV~~~~~~~~~~~~~V~~D~~~~g~~a~~~-L---~-~G~~~I~ 126 (277)
T 3hs3_A 58 -NAIINFENNNVDGIITSA----FTIPPNF-HLNTPLVMYDSANINDDIVRIVSNNTKGGKESIKL-L---S-KKIEKVL 126 (277)
T ss_dssp -HHHHHHHHTTCSEEEEEC----CCCCTTC-CCSSCEEEESCCCCCSSSEEEEECHHHHHHHHHHT-S---C-TTCCEEE
T ss_pred -HHHHHHHhCCCCEEEEcc----hHHHHHH-hCCCCEEEEcccccCCCCEEEEEChHHHHHHHHHH-H---H-hCCCEEE
Confidence 234567889999888876 2223332 236776644211 12222221 1 1 2345999
Q ss_pred EEecHH-----HHhhhhHHHHHHhcCC
Q 026201 220 VLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 220 LLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
+++.+. ..+..-|.+.++++|+
T Consensus 127 ~i~~~~~~~~~~~R~~Gf~~~l~~~g~ 153 (277)
T 3hs3_A 127 IQHWPLSLPTIRERIEAMTAEASKLKI 153 (277)
T ss_dssp EEESCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred EEeCCCcCccHHHHHHHHHHHHHHCCC
Confidence 996542 1233447788887764
No 119
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=85.62 E-value=4.3 Score=35.11 Aligned_cols=116 Identities=9% Similarity=0.037 Sum_probs=62.7
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+.++||++=.- .+-.||..+.+...+. ....+++++... + +. -.
T Consensus 63 ~~~~Igvi~~~---~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~-~-------------------------~~----~~ 109 (333)
T 3jvd_A 63 RSALVGVIVPD---LSNEYYSESLQTIQQDLKAAGYQMLVAEANS-V-------------------------QA----QD 109 (333)
T ss_dssp -CCEEEEEESC---SSSHHHHHHHHHHHHHHHHHTCEEEEEECCS-H-------------------------HH----HH
T ss_pred CCCEEEEEeCC---CcChHHHHHHHHHHHHHHHCCCEEEEECCCC-h-------------------------HH----HH
Confidence 35789998532 2235777777766543 345555554111 1 11 12
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc-------------------HHHHHHHHHhcCCCCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS-------------------ECVAKELKEANMKPLEAGSPL 216 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii-------------------d~t~~~i~~~~~k~~~~~~~~ 216 (241)
+.++.|...++|.|++... .+.+. ..++|++-+- ..+++++.+.|. +
T Consensus 110 ~~~~~l~~~~vdGiIi~~~-----~~~~~-~~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~--------~ 175 (333)
T 3jvd_A 110 VVMESLISIQAAGIIHVPV-----VGSIA-PEGIPMVQLTRGELGPGFPRVLCDDEAGFFQLTESVLGGSG--------M 175 (333)
T ss_dssp HHHHHHHHHTCSEEEECCC-----TTCCC--CCSCEEEECC----CCSCEEEECHHHHHHHHHHHHCCSSS--------C
T ss_pred HHHHHHHhCCCCEEEEcch-----HHHHh-hCCCCEEEECccCCCCCCCEEEEChHHHHHHHHHHHHHCCC--------C
Confidence 3345677889999888765 11111 2355655431 123344444443 4
Q ss_pred EEEEEecHH---H--HhhhhHHHHHHhcCC
Q 026201 217 RIGVLAKNA---I--LTAGFYQEKLQHEDC 241 (241)
Q Consensus 217 rVGLLaT~~---T--~~s~~Y~~~L~~~G~ 241 (241)
+||+++.+. + .+..-|.+.++++|+
T Consensus 176 ~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~ 205 (333)
T 3jvd_A 176 NIAALVGEESLSTTQERMRGISHAASIYGA 205 (333)
T ss_dssp EEEEEESCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEeCCCCCccHHHHHHHHHHHHHHCCC
Confidence 999998652 1 233447788887764
No 120
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=85.44 E-value=9.4 Score=32.16 Aligned_cols=73 Identities=14% Similarity=-0.010 Sum_probs=41.7
Q ss_pred HHHHHHhCCcEEEEeCCchh---hhHHHHhccCCCCeeec--------------------cHHHHHHHH-HhcCCCCCCC
Q 026201 158 RVFLEKAGARCIVMPCHLSH---IWHDEVCKGCSVPFLHV--------------------SECVAKELK-EANMKPLEAG 213 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH---~~~d~l~~~~~vPil~I--------------------id~t~~~i~-~~~~k~~~~~ 213 (241)
++.|...++|.|++...... ..++.+++ .++|++-+ ...+++++. +.|.+
T Consensus 51 i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~G~~----- 124 (313)
T 3m9w_A 51 IENMINRGVDVLVIIPYNGQVLSNVVKEAKQ-EGIKVLAYDRMINDADIDFYISFDNEKVGELQAKALVDIVPQG----- 124 (313)
T ss_dssp HHHHHHTTCSEEEEECSSTTSCHHHHHHHHT-TTCEEEEESSCCTTSCCSEEEEECHHHHHHHHHHHHHHHCSSE-----
T ss_pred HHHHHHcCCCEEEEeCCChhhhHHHHHHHHH-CCCeEEEECCcCCCCCceEEEecCHHHHHHHHHHHHHHhCCCC-----
Confidence 45677889998888766554 33455543 24554432 234566666 54443
Q ss_pred CCCEEEEEecHHH-----HhhhhHHHHHHhc
Q 026201 214 SPLRIGVLAKNAI-----LTAGFYQEKLQHE 239 (241)
Q Consensus 214 ~~~rVGLLaT~~T-----~~s~~Y~~~L~~~ 239 (241)
+|++++.... .+..-|++.++++
T Consensus 125 ---~i~~i~g~~~~~~~~~R~~Gf~~~l~~~ 152 (313)
T 3m9w_A 125 ---NYFLMGGSPVDNNAKLFRAGQMKVLKPY 152 (313)
T ss_dssp ---EEEEEESCTTCHHHHHHHHHHHHHHHHH
T ss_pred ---cEEEEECCCCCccHHHHHHHHHHHHHhh
Confidence 9999964321 1233466666654
No 121
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=85.11 E-value=2.6 Score=36.78 Aligned_cols=75 Identities=15% Similarity=0.116 Sum_probs=46.1
Q ss_pred HHHHHHhCCcEEEEeCCch-hhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCCCCE
Q 026201 158 RVFLEKAGARCIVMPCHLS-HIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTA-H~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~~~r 217 (241)
++.|...++|.|++.+... ...++.+.+. ++|+|-+ ...+++++.+.|.+ |
T Consensus 121 ~~~l~~~~vdGiIi~~~~~~~~~~~~l~~~-~iPvV~i~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~r--------~ 191 (366)
T 3h5t_A 121 QQLVNNAAVDGVVIYSVAKGDPHIDAIRAR-GLPAVIADQPAREEGMPFIAPNNRKAIAPAAQALIDAGHR--------K 191 (366)
T ss_dssp HHHHHTCCCSCEEEESCCTTCHHHHHHHHH-TCCEEEESSCCSCTTCCEEEECHHHHTHHHHHHHHHTTCC--------S
T ss_pred HHHHHhCCCCEEEEecCCCChHHHHHHHHC-CCCEEEECCccCCCCCCEEEeChHHHHHHHHHHHHHCCCC--------c
Confidence 4567788999888765433 2344555432 4454432 33567778887765 9
Q ss_pred EEEEec----------------------HHHHhhhhHHHHHHhcCC
Q 026201 218 IGVLAK----------------------NAILTAGFYQEKLQHEDC 241 (241)
Q Consensus 218 VGLLaT----------------------~~T~~s~~Y~~~L~~~G~ 241 (241)
||+++. ....+..-|.+.|+++|+
T Consensus 192 I~~i~~~~~~~~~~g~~~~~~~~~~~~~~~~~R~~Gf~~al~~~g~ 237 (366)
T 3h5t_A 192 IGILSIRLDRANNDGEVTRERLENAQYQVQRDRVRGAMEVFIEAGI 237 (366)
T ss_dssp EEEEEECCSSSCCCEECCHHHHHTCCCTTHHHHHHHHHHHHHHHTC
T ss_pred EEEEecccccccccCccccccccccccchHHHHHHHHHHHHHHCCC
Confidence 999982 112334458888888764
No 122
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=84.56 E-value=1.9 Score=36.31 Aligned_cols=76 Identities=16% Similarity=0.195 Sum_probs=43.8
Q ss_pred HHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec--------------------cHHHHHHHHHhcCCCCCCCCCC
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV--------------------SECVAKELKEANMKPLEAGSPL 216 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I--------------------id~t~~~i~~~~~k~~~~~~~~ 216 (241)
.++.|...++|.|++.........+.+. ..++|+|-+ ...+++++.+.|.+
T Consensus 62 ~~~~l~~~~vdGiIi~~~~~~~~~~~~~-~~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~-------- 132 (301)
T 3miz_A 62 IWKMFQSHRIDGVLYVTMYRRIVDPESG-DVSIPTVMINCRPQTRELLPSIEPDDYQGARDLTRYLLERGHR-------- 132 (301)
T ss_dssp HHHHHHHTTCSEEEEEEEEEEECCCCCT-TCCCCEEEEEEECSSTTSSCEEEECHHHHHHHHHHHHHTTTCC--------
T ss_pred HHHHHHhCCCCEEEEecCCccHHHHHHH-hCCCCEEEECCCCCCCCCCCEEeeChHHHHHHHHHHHHHcCCC--------
Confidence 3456788899988776543322222222 235665543 22456666666654
Q ss_pred EEEEEecHHH-----HhhhhHHHHHHhcCC
Q 026201 217 RIGVLAKNAI-----LTAGFYQEKLQHEDC 241 (241)
Q Consensus 217 rVGLLaT~~T-----~~s~~Y~~~L~~~G~ 241 (241)
|||+++.+.. .+..-|.+.++++|+
T Consensus 133 ~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~ 162 (301)
T 3miz_A 133 RIGYIRLNPILLGAELRLDAFRRTTSEFGL 162 (301)
T ss_dssp SEEEEECCTTSHHHHHHHHHHHHHHHHHTC
T ss_pred eEEEEecCccchhHHHHHHHHHHHHHHcCC
Confidence 9999985321 233447788877763
No 123
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=83.59 E-value=19 Score=30.33 Aligned_cols=74 Identities=15% Similarity=0.135 Sum_probs=40.8
Q ss_pred HHHHHhCCcEEEEeCCchhh--hHHHHhccCCCCeeec-------------------------cHHHHHHHHHh-cCCCC
Q 026201 159 VFLEKAGARCIVMPCHLSHI--WHDEVCKGCSVPFLHV-------------------------SECVAKELKEA-NMKPL 210 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~--~~d~l~~~~~vPil~I-------------------------id~t~~~i~~~-~~k~~ 210 (241)
+.|.+.+++.|+.+..+... ..+.+ +..++|+|.. ...+++.+.+. +.+
T Consensus 63 ~~l~~~~v~~iig~~~s~~~~~~~~~~-~~~~ip~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-- 139 (346)
T 1usg_A 63 NKIVNDGIKYVIGHLCSSSTQPASDIY-EDEGILMISPGATNPELTQRGYQHIMRTAGLDSSQGPTAAKYILETVKPQ-- 139 (346)
T ss_dssp HHHHHTTCCEEECCSSHHHHHHHHHHH-HHHTCEEEECCCCCGGGGSSCCSSEEECSCCGGGHHHHHHHHHHHTTCCS--
T ss_pred HHHHhCCCCEEEcCCCcHHHHHHHHHH-HHCCCeEEeeCCCChHHhcCCCCcEEeccCChHHHHHHHHHHHHHhcCCC--
Confidence 44556789988877554332 22332 2234454432 12345555443 443
Q ss_pred CCCCCCEEEEEecHHHH---hhhhHHHHHHhcCC
Q 026201 211 EAGSPLRIGVLAKNAIL---TAGFYQEKLQHEDC 241 (241)
Q Consensus 211 ~~~~~~rVGLLaT~~T~---~s~~Y~~~L~~~G~ 241 (241)
||++++.+... ...-|++.+++.|+
T Consensus 140 ------~i~~i~~~~~~~~~~~~~~~~~l~~~g~ 167 (346)
T 1usg_A 140 ------RIAIIHDKQQYGEGLARSVQDGLKAANA 167 (346)
T ss_dssp ------SEEEEECSSHHHHHHHHHHHHHHHHTTC
T ss_pred ------eEEEEECCCchHHHHHHHHHHHHHHcCC
Confidence 99999865322 23457788887764
No 124
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=83.18 E-value=17 Score=29.50 Aligned_cols=74 Identities=11% Similarity=0.115 Sum_probs=43.0
Q ss_pred HHHHHHHhC-CcEEEEeCCchh---hhHHHHhccCCCCeeec--------------------cHHHHHHHHHh----cCC
Q 026201 157 KRVFLEKAG-ARCIVMPCHLSH---IWHDEVCKGCSVPFLHV--------------------SECVAKELKEA----NMK 208 (241)
Q Consensus 157 ~~~~Le~~G-ad~IvIaCNTAH---~~~d~l~~~~~vPil~I--------------------id~t~~~i~~~----~~k 208 (241)
.++.|.+.+ +|.|++...... ..++.+++ .++|++-+ ...+++++.+. |.+
T Consensus 50 ~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~~-~~ipvV~~~~~~~~~~~~~~V~~d~~~~g~~~~~~l~~~~~~~G~~ 128 (276)
T 3ksm_A 50 ILSYHLSQAPPDALILAPNSAEDLTPSVAQYRA-RNIPVLVVDSDLAGDAHQGLVATDNYAAGQLAARALLATLDLSKER 128 (276)
T ss_dssp HHHHHHHHSCCSEEEECCSSTTTTHHHHHHHHH-TTCCEEEESSCCSSSCSSEEEECCHHHHHHHHHHHHHHHSCTTSCE
T ss_pred HHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHHH-CCCcEEEEecCCCCCCcceEEccCHHHHHHHHHHHHHHhcCcCCCc
Confidence 345677788 998888664322 23454443 24554432 23456677776 544
Q ss_pred CCCCCCCCEEEEEecH-----HHHhhhhHHHHHHhc
Q 026201 209 PLEAGSPLRIGVLAKN-----AILTAGFYQEKLQHE 239 (241)
Q Consensus 209 ~~~~~~~~rVGLLaT~-----~T~~s~~Y~~~L~~~ 239 (241)
||++++.+ ...+..-|.+.++++
T Consensus 129 --------~i~~i~~~~~~~~~~~R~~gf~~~l~~~ 156 (276)
T 3ksm_A 129 --------NIALLRLRAGNASTDQREQGFLDVLRKH 156 (276)
T ss_dssp --------EEEECBCCTTCHHHHHHHHHHHHHHTTC
T ss_pred --------eEEEEEcCCCchhHHHHHHHHHHHHHhC
Confidence 99999743 122334477777766
No 125
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=82.91 E-value=6 Score=33.21 Aligned_cols=124 Identities=14% Similarity=0.169 Sum_probs=69.6
Q ss_pred cCCeEEEEeCCCh-HHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHH
Q 026201 79 QANTVGIVGGASV-DSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENL 154 (241)
Q Consensus 79 ~~k~IGIIGGmGp-~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l 154 (241)
+.++||++=-... ..+-.||..+.+...+. ....+++++... ....
T Consensus 5 ~s~~Igvi~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~~-----------------------~~~~------- 54 (294)
T 3qk7_A 5 RTDAIALAYPSRPRVLNNSTFLEMISWIGIELGKRGLDLLLIPDEP-----------------------GEKY------- 54 (294)
T ss_dssp CCCEEEEEEESCSGGGSCHHHHHHHHHHHHHHHHTTCEEEEEEECT-----------------------TCCC-------
T ss_pred ccceEEEEecCCCccccChhHHHHHHHHHHHHHHCCCEEEEEeCCC-----------------------hhhH-------
Confidence 4578999853110 22345777777766642 455566554110 0000
Q ss_pred HHHHHHHHHhCCcEEEEeCCc-hhhhHHHHhccCCCCeeec-------------------cHHHHHHHHHhcCCCCCCCC
Q 026201 155 RRKRVFLEKAGARCIVMPCHL-SHIWHDEVCKGCSVPFLHV-------------------SECVAKELKEANMKPLEAGS 214 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNT-AH~~~d~l~~~~~vPil~I-------------------id~t~~~i~~~~~k~~~~~~ 214 (241)
.+..+.|...++|.|++.... ....++.+.+ .++|+|-+ ...+++++.+.|.+
T Consensus 55 ~~~~~~l~~~~vdGiIi~~~~~~~~~~~~l~~-~~iPvV~~~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~------ 127 (294)
T 3qk7_A 55 QSLIHLVETRRVDALIVAHTQPEDFRLQYLQK-QNFPFLALGRSHLPKPYAWFDFDNHAGASLAVKRLLELGHQ------ 127 (294)
T ss_dssp HHHHHHHHHTCCSEEEECSCCSSCHHHHHHHH-TTCCEEEESCCCCSSCCEEEEECHHHHHHHHHHHHHHTTCC------
T ss_pred HHHHHHHHcCCCCEEEEeCCCCChHHHHHHHh-CCCCEEEECCCCCCCCCCEEEcChHHHHHHHHHHHHHCCCc------
Confidence 122356778899988776543 2334455543 35665543 23466777777655
Q ss_pred CCEEEEEecHH---H--HhhhhHHHHHHhcCC
Q 026201 215 PLRIGVLAKNA---I--LTAGFYQEKLQHEDC 241 (241)
Q Consensus 215 ~~rVGLLaT~~---T--~~s~~Y~~~L~~~G~ 241 (241)
||++++.+. + .+..-|.+.++++|+
T Consensus 128 --~I~~i~~~~~~~~~~~R~~Gf~~al~~~g~ 157 (294)
T 3qk7_A 128 --RIAFVSTDARISYVDQRLQGYVQTMSEAGL 157 (294)
T ss_dssp --CEEEEEESSCCHHHHHHHHHHHHHHHTTTC
T ss_pred --eEEEEeCCcccchHHHHHHHHHHHHHHCCC
Confidence 999997542 1 234447888887764
No 126
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=82.58 E-value=19 Score=29.66 Aligned_cols=35 Identities=9% Similarity=0.041 Sum_probs=19.1
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEec
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCS 117 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S 117 (241)
.++||++-.. .+-.||..+.+...+. ....+++++
T Consensus 2 ~~~Ig~i~~~---~~~~~~~~~~~gi~~~~~~~g~~~~~~~ 39 (290)
T 2fn9_A 2 KGKMAIVIST---LNNPWFVVLAETAKQRAEQLGYEATIFD 39 (290)
T ss_dssp -CEEEEEESC---SSSHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ceEEEEEeCC---CCChHHHHHHHHHHHHHHHcCCEEEEeC
Confidence 4689998632 1235666666665532 344555543
No 127
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=81.82 E-value=22 Score=29.87 Aligned_cols=65 Identities=11% Similarity=-0.041 Sum_probs=36.0
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRR 156 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~ 156 (241)
.++|||+--- .+-.||..+.+...+. ....+++++. ..+.+... +
T Consensus 3 ~~~Igvi~~~---~~~~~~~~~~~gi~~~a~~~g~~~~~~~~-------------------------~~~~~~~~----~ 50 (330)
T 3uug_A 3 KGSVGIAMPT---KSSARWIDDGNNIVKQLQEAGYKTDLQYA-------------------------DDDIPNQL----S 50 (330)
T ss_dssp CCEEEEEECC---SSSTHHHHHHHHHHHHHHHTTCEEEEEEC-------------------------TTCHHHHH----H
T ss_pred CcEEEEEeCC---CcchHHHHHHHHHHHHHHHcCCEEEEeeC-------------------------CCCHHHHH----H
Confidence 4689988632 1224677776666542 4555665541 11222222 2
Q ss_pred HHHHHHHhCCcEEEEeCCch
Q 026201 157 KRVFLEKAGARCIVMPCHLS 176 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTA 176 (241)
.++.|...++|.|++.....
T Consensus 51 ~i~~~~~~~vdgiIi~~~~~ 70 (330)
T 3uug_A 51 QIENMVTKGVKVLVIASIDG 70 (330)
T ss_dssp HHHHHHHHTCSEEEECCSSG
T ss_pred HHHHHHHcCCCEEEEEcCCc
Confidence 33566778999888765543
No 128
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=81.59 E-value=4 Score=36.38 Aligned_cols=106 Identities=12% Similarity=0.135 Sum_probs=56.1
Q ss_pred CCeEEEEeC--CChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHH
Q 026201 80 ANTVGIVGG--ASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRK 157 (241)
Q Consensus 80 ~k~IGIIGG--mGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~ 157 (241)
.|+.|-+|| -.-....++.++|.....+....+++|.-..+ ..+ ....-++ +.+.
T Consensus 119 ~k~cgH~gg~~k~l~p~~e~~~rI~Aa~~a~~~~~~~i~aRtd---a~~----------------a~~g~~~----ai~R 175 (295)
T 1s2w_A 119 PKTNSLHDGRAQPLADIEEFALKIKACKDSQTDPDFCIVARVE---AFI----------------AGWGLDE----ALKR 175 (295)
T ss_dssp --------CTTCCBCCHHHHHHHHHHHHHHCSSTTCEEEEEEC---TTT----------------TTCCHHH----HHHH
T ss_pred CccccccCCCCCcccCHHHHHHHHHHHHHhcccCCcEEEEeeh---HHh----------------ccccHHH----HHHH
Confidence 567787876 12234457788888777765234444433110 000 0011122 3344
Q ss_pred HHHHHHhCCcEEEEeC-CchhhhHHHHhccCC--CCeeeccH----HHHHHHHHhcCC
Q 026201 158 RVFLEKAGARCIVMPC-HLSHIWHDEVCKGCS--VPFLHVSE----CVAKELKEANMK 208 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaC-NTAH~~~d~l~~~~~--vPil~Iid----~t~~~i~~~~~k 208 (241)
++.++++|||+|++.| -..-..+.++.+.++ +|++-.+. ...+++.+.|.+
T Consensus 176 a~ay~eAGAd~i~~e~~~~~~~~~~~i~~~~~~~~P~i~~~~~~~~~~~~eL~~lGv~ 233 (295)
T 1s2w_A 176 AEAYRNAGADAILMHSKKADPSDIEAFMKAWNNQGPVVIVPTKYYKTPTDHFRDMGVS 233 (295)
T ss_dssp HHHHHHTTCSEEEECCCSSSSHHHHHHHHHHTTCSCEEECCSTTTTSCHHHHHHHTCC
T ss_pred HHHHHHcCCCEEEEcCCCCCHHHHHHHHHHcCCCCCEEEeCCCCCCCCHHHHHHcCCc
Confidence 5678899999999988 333445566666666 88763322 457899999875
No 129
>3cs3_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative; 2.40A {Enterococcus faecalis}
Probab=81.34 E-value=11 Score=31.06 Aligned_cols=38 Identities=8% Similarity=0.032 Sum_probs=23.9
Q ss_pred HHHHHHHHHhcCCCCCCCCCCEEEEEecHH-----HHhhhhHHHHHHhcCC
Q 026201 196 ECVAKELKEANMKPLEAGSPLRIGVLAKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 196 d~t~~~i~~~~~k~~~~~~~~rVGLLaT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
..+++++.+.|.+ ||++++.+. ..+..-|++.++++|+
T Consensus 107 ~~a~~~L~~~G~~--------~i~~i~~~~~~~~~~~R~~gf~~~l~~~g~ 149 (277)
T 3cs3_A 107 TQAIEQFVNVGSK--------KVLLLSGPEKGYDSQERLAVSTRELTRFGI 149 (277)
T ss_dssp HHHHHHHHHTTCS--------CEEEEECCTTSHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCc--------eEEEEeCCccCccHHHHHHHHHHHHHHcCC
Confidence 3456667776654 999997542 1233447788877764
No 130
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=80.59 E-value=26 Score=29.79 Aligned_cols=74 Identities=11% Similarity=0.101 Sum_probs=41.4
Q ss_pred HHHHHHhCCcEEEEeCCch--hhhHHHHhccCCCCeeec--------------------------cHHHHHHHHHh-c-C
Q 026201 158 RVFLEKAGARCIVMPCHLS--HIWHDEVCKGCSVPFLHV--------------------------SECVAKELKEA-N-M 207 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTA--H~~~d~l~~~~~vPil~I--------------------------id~t~~~i~~~-~-~ 207 (241)
++.|...++|.|+++.+.. ...++.+.+. ++|++-+ ...+++++.+. | .
T Consensus 97 i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~-~ip~V~~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~Gg~ 175 (342)
T 1jx6_A 97 LMEALKSKSDYLIFTLDTTRHRKFVEHVLDS-TNTKLILQNITTPVREWDKHQPFLYVGFDHAEGSRELATEFGKFFPKH 175 (342)
T ss_dssp HHHHHHTTCSEEEECCSSSTTHHHHHHHHHH-CSCEEEEETCCSCBGGGTTSCCSEEEECCHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHhcCCCEEEEeCChHhHHHHHHHHHHc-CCCEEEEecCCCcccccccCCCceEEecCcHHHHHHHHHHHHHHcCCC
Confidence 3456778999999955432 2344555432 4554322 12355666665 4 4
Q ss_pred CCCCCCCCCEEEEEecHHH----HhhhhHHHHHHhcC
Q 026201 208 KPLEAGSPLRIGVLAKNAI----LTAGFYQEKLQHED 240 (241)
Q Consensus 208 k~~~~~~~~rVGLLaT~~T----~~s~~Y~~~L~~~G 240 (241)
+ +|++++.... .+..-|.+.++++|
T Consensus 176 ~--------~I~~i~~~~~~~~~~R~~Gf~~~l~~~~ 204 (342)
T 1jx6_A 176 T--------YYSVLYFSEGYISDVRGDTFIHQVNRDN 204 (342)
T ss_dssp C--------EEEEECCSTTHHHHHHHHHHHHHHHHHH
T ss_pred c--------eEEEEEcCCcchhhHHHHHHHHHHHhCC
Confidence 4 9999975421 22333667776654
No 131
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=79.35 E-value=2.4 Score=34.98 Aligned_cols=74 Identities=8% Similarity=-0.029 Sum_probs=38.1
Q ss_pred HHHHHhCCcEEEEeCCchh-hhHHHHhccCCCCeeecc-----------------HHHHHHHHHhcCCCCCCCCCCEEEE
Q 026201 159 VFLEKAGARCIVMPCHLSH-IWHDEVCKGCSVPFLHVS-----------------ECVAKELKEANMKPLEAGSPLRIGV 220 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH-~~~d~l~~~~~vPil~Ii-----------------d~t~~~i~~~~~k~~~~~~~~rVGL 220 (241)
+.|...++|.|++...... ..++.++ ..++|++-+- ..+++++.+.|. +||++
T Consensus 49 ~~l~~~~vdgiI~~~~~~~~~~~~~~~-~~~iPvV~~~~~~~~~~~V~~d~~~~~~~a~~~L~~~G~--------~~i~~ 119 (276)
T 2h0a_A 49 NTTLAYLTDGLILASYDLTERFEEGRL-PTERPVVLVDAQNPRYDSVYLDNRLGGRLAGAYLARFPG--------PIFAI 119 (276)
T ss_dssp -----CCCSEEEEESCCCC------CC-SCSSCEEEESSCCTTSEEEEECSHHHHHHHHHHHTTSSS--------CEEEE
T ss_pred HHHHhCCCCEEEEecCCCCHHHHHHHh-hcCCCEEEEeccCCCCCEEEEccHHHHHHHHHHHHHcCC--------CeEEE
Confidence 4566789998887654333 3334443 2467876541 233444444443 49999
Q ss_pred EecHH---------H-HhhhhHHHHHHhcCC
Q 026201 221 LAKNA---------I-LTAGFYQEKLQHEDC 241 (241)
Q Consensus 221 LaT~~---------T-~~s~~Y~~~L~~~G~ 241 (241)
++.+. . .+..-|.+.++++|+
T Consensus 120 i~~~~~~~~~~~~~~~~R~~gf~~~l~~~g~ 150 (276)
T 2h0a_A 120 AVEEEPDRAFRRTVFAERMAGFQEALKEAGR 150 (276)
T ss_dssp EECCSCCC---CCHHHHHHHHHHHHHHHTTC
T ss_pred EecCcccccccchhHHHHHHHHHHHHHHcCC
Confidence 97643 1 233447888887764
No 132
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=79.18 E-value=5.8 Score=35.59 Aligned_cols=65 Identities=15% Similarity=0.197 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH--------H--HHHHHHhcCCCCCCCCCCEEEEEec
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC--------V--AKELKEANMKPLEAGSPLRIGVLAK 223 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~--------t--~~~i~~~~~k~~~~~~~~rVGLLaT 223 (241)
+.+.++-|.+.|+|+|++=.. .|-..+++.+..++||||..+. . .-.+++...+ ..+.+|+++|-
T Consensus 81 l~DTarvLs~~~~D~iviR~~-~~~~~~~la~~~~vPVINagdg~~~HPtQaLaDl~Ti~e~~g~----l~glkva~vGD 155 (304)
T 3r7f_A 81 LYDTIRTLESIGVDVCVIRHS-EDEYYEELVSQVNIPILNAGDGCGQHPTQSLLDLMTIYEEFNT----FKGLTVSIHGD 155 (304)
T ss_dssp HHHHHHHHHHHTCCEEEEECS-STTCHHHHHHHCSSCEEESCCTTSCCHHHHHHHHHHHHHHHSC----CTTCEEEEESC
T ss_pred HHHHHHHHHHhcCCEEEEecC-ChhHHHHHHHhCCCCEEeCCCCCCcCcHHHHHHHHHHHHHhCC----CCCCEEEEEcC
Confidence 445557899999999999976 4667788888899999998752 1 1123443211 24669999996
No 133
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=78.64 E-value=21 Score=29.54 Aligned_cols=81 Identities=15% Similarity=0.070 Sum_probs=42.2
Q ss_pred HHHHHHHhCCcEEEEeCCchhh---hHHHHhccCCCCeeecc-------------------------HHHHHHHHHh-cC
Q 026201 157 KRVFLEKAGARCIVMPCHLSHI---WHDEVCKGCSVPFLHVS-------------------------ECVAKELKEA-NM 207 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~---~~d~l~~~~~vPil~Ii-------------------------d~t~~~i~~~-~~ 207 (241)
.++.|...++|.|++....... .++++++ .++|++-+- ..+++++.+. +.
T Consensus 49 ~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~l~~~~g~ 127 (306)
T 8abp_A 49 AIDSLAASGAKGFVICTPDPKLGSAIVAKARG-YDMKVIAVDDQFVNAKGKPMDTVPLVMLAATKIGERQGQELYKEMQK 127 (306)
T ss_dssp HHHHHHHTTCCEEEEECSCGGGHHHHHHHHHH-TTCEEEEESSCCBCTTSCBCTTSCEEEECHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCCchhhHHHHHHHHH-CCCcEEEeCCCCCCccccccccccEEecChhHHHHHHHHHHHHHHHh
Confidence 3456777899988876654332 2344433 355554332 1334455533 32
Q ss_pred CCCCCCCCCEEEEEe------cHHHHhhhhHHHHHHhcCC
Q 026201 208 KPLEAGSPLRIGVLA------KNAILTAGFYQEKLQHEDC 241 (241)
Q Consensus 208 k~~~~~~~~rVGLLa------T~~T~~s~~Y~~~L~~~G~ 241 (241)
+ ....++||+++ +....+..-|.+.|+++|+
T Consensus 128 ~---~~~~~~i~~~~~~~~~~~~~~~R~~Gf~~~l~~~g~ 164 (306)
T 8abp_A 128 R---GWDVKESAVMAITANELDTARRRTTGSMDALKAAGF 164 (306)
T ss_dssp H---TCCGGGEEEEEEECTTSHHHHHHHHHHHHHHHHHTC
T ss_pred c---CCCccceEEEEecCCCChHHHHHHHHHHHHHHhcCC
Confidence 1 00113899986 2333344558888887663
No 134
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=78.61 E-value=12 Score=30.82 Aligned_cols=126 Identities=15% Similarity=0.116 Sum_probs=65.9
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+.++||++-.- .+-.||..+.+...+. ....++++... .+.+...
T Consensus 7 ~~~~Ig~i~~~---~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~-------------------------~~~~~~~---- 54 (293)
T 3l6u_A 7 KRNIVGFTIVN---DKHEFAQRLINAFKAEAKANKYEALVATSQ-------------------------NSRISER---- 54 (293)
T ss_dssp --CEEEEEESC---SCSHHHHHHHHHHHHHHHHTTCEEEEEECS-------------------------SCHHHHH----
T ss_pred CCcEEEEEEec---CCcHHHHHHHHHHHHHHHHcCCEEEEECCC-------------------------CCHHHHH----
Confidence 35789998632 1235677776666542 45566665411 1222222
Q ss_pred HHHHHHHHhCCcEEEEeCCchh---hhHHHHhccCCCCeeec--------------------cHHHHHHHHHh--cCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLSH---IWHDEVCKGCSVPFLHV--------------------SECVAKELKEA--NMKPL 210 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH---~~~d~l~~~~~vPil~I--------------------id~t~~~i~~~--~~k~~ 210 (241)
+.++.|...++|.|++...... ..++.+.+ .++|+|-+ ...+++++.+. |.+.
T Consensus 55 ~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~~~~~l~~~~~g~~~- 132 (293)
T 3l6u_A 55 EQILEFVHLKVDAIFITTLDDVYIGSAIEEAKK-AGIPVFAIDRMIRSDAVVSSITSNNQMIGEQLASYIKNELIKQTG- 132 (293)
T ss_dssp HHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHH-TTCCEEEESSCCCCTTCSEEEEECHHHHHHHHHHHHHHHHHHHHS-
T ss_pred HHHHHHHHcCCCEEEEecCChHHHHHHHHHHHH-cCCCEEEecCCCCCCcceeEEecCHHHHHHHHHHHHHHHhccCCC-
Confidence 2335677889998887655444 33455443 25665543 23355666663 4320
Q ss_pred CCCCCCEEEEEecHH-----HHhhhhHHHHHHhc-C
Q 026201 211 EAGSPLRIGVLAKNA-----ILTAGFYQEKLQHE-D 240 (241)
Q Consensus 211 ~~~~~~rVGLLaT~~-----T~~s~~Y~~~L~~~-G 240 (241)
...++|++++... ..+..-|.+.++++ |
T Consensus 133 --~~~~~i~~i~g~~~~~~~~~R~~gf~~~l~~~~g 166 (293)
T 3l6u_A 133 --RSTGRIVEITGTANVYTTNERHRGFLKGIENEPT 166 (293)
T ss_dssp --CSCEEEEEEECSTTCHHHHHHHHHHHHHHTTCTT
T ss_pred --CCCceEEEEECCCCCchHHHHHHHHHHHHHhCCC
Confidence 0123899997321 12334467777766 5
No 135
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=77.82 E-value=7 Score=32.23 Aligned_cols=71 Identities=11% Similarity=0.108 Sum_probs=41.3
Q ss_pred HHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec--------------------cHHHHHHHHHhcCCCCCCCCCCEE
Q 026201 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV--------------------SECVAKELKEANMKPLEAGSPLRI 218 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I--------------------id~t~~~i~~~~~k~~~~~~~~rV 218 (241)
+.|...++|.|+++++.....++. .++|+|-+ ...+++++.+.|.+ +|
T Consensus 54 ~~l~~~~vdgiI~~~~~~~~~~~~----~~iPvV~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~G~~--------~i 121 (280)
T 3gyb_A 54 TSALSMRPDGIIIAQDIPDFTVPD----SLPPFVIAGTRITQASTHDSVANDDFRGAEIATKHLIDLGHT--------HI 121 (280)
T ss_dssp HHHHTTCCSEEEEESCC------------CCCEEEESCCCSSSCSTTEEEECHHHHHHHHHHHHHHTTCC--------SE
T ss_pred HHHHhCCCCEEEecCCCChhhHhh----cCCCEEEECCCCCCCCCCCEEEechHHHHHHHHHHHHHCCCC--------eE
Confidence 456788999888666554333333 56666533 23456677776655 99
Q ss_pred EEEecHHH---HhhhhHHHHHHhcCC
Q 026201 219 GVLAKNAI---LTAGFYQEKLQHEDC 241 (241)
Q Consensus 219 GLLaT~~T---~~s~~Y~~~L~~~G~ 241 (241)
++++.... .+..-|.+.++++|+
T Consensus 122 ~~i~~~~~~~~~R~~gf~~~l~~~~~ 147 (280)
T 3gyb_A 122 AHLRVGSGAGLRRFESFEATMRAHGL 147 (280)
T ss_dssp EEECCSSHHHHHHHHHHHHHHHHTTC
T ss_pred EEEeCCCchHHHHHHHHHHHHHHcCc
Confidence 99987643 233347777777663
No 136
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=77.55 E-value=13 Score=31.09 Aligned_cols=73 Identities=10% Similarity=-0.003 Sum_probs=41.0
Q ss_pred HHHHHhCCcEEEEeCCchh---hhHHHHhccCCCCeeec---------------------------cHHHHHHHHHh-c-
Q 026201 159 VFLEKAGARCIVMPCHLSH---IWHDEVCKGCSVPFLHV---------------------------SECVAKELKEA-N- 206 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH---~~~d~l~~~~~vPil~I---------------------------id~t~~~i~~~-~- 206 (241)
+.|...++|.|++...... ..++++.+ .++|++-+ ...+++++.+. |
T Consensus 53 ~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~-~~iPvV~~~~~~~~~~~~~~~~~~~~~V~~D~~~~g~~a~~~L~~~~G~ 131 (288)
T 1gud_A 53 EDLSNKNYKGIAFAPLSSVNLVMPVARAWK-KGIYLVNLDEKIDMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKLGA 131 (288)
T ss_dssp HHHHTSSEEEEEECCSSSSTTHHHHHHHHH-TTCEEEEESSCCCHHHHHHTTCCCSEEEECCHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHcCCCEEEEeCCChHHHHHHHHHHHH-CCCeEEEECCCCCcccccccCCceeEEECCChHHHHHHHHHHHHHHhCC
Confidence 4566778888777543222 22344433 34555432 22355666666 5
Q ss_pred -CCCCCCCCCCEEEEEecHH-----HHhhhhHHHHHHhc-C
Q 026201 207 -MKPLEAGSPLRIGVLAKNA-----ILTAGFYQEKLQHE-D 240 (241)
Q Consensus 207 -~k~~~~~~~~rVGLLaT~~-----T~~s~~Y~~~L~~~-G 240 (241)
.+ ||++++.+. ..+..-|++.++++ |
T Consensus 132 ~~~--------~I~~i~g~~~~~~~~~R~~Gf~~al~~~~g 164 (288)
T 1gud_A 132 EGG--------EVAIIEGKAGNASGEARRNGATEAFKKASQ 164 (288)
T ss_dssp GCE--------EEEEEECSTTCHHHHHHHHHHHHHHHTCTT
T ss_pred CCC--------EEEEEeCCCCCchHhHHHHHHHHHHHhCCC
Confidence 44 999997432 12333478888766 5
No 137
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=77.30 E-value=14 Score=32.24 Aligned_cols=75 Identities=12% Similarity=-0.032 Sum_probs=43.5
Q ss_pred HHHHH-HhCCcEEEEeCCchhh--hHHHHhccCCCCeeec----------------------cHHHHHHHHHhcCCCCCC
Q 026201 158 RVFLE-KAGARCIVMPCHLSHI--WHDEVCKGCSVPFLHV----------------------SECVAKELKEANMKPLEA 212 (241)
Q Consensus 158 ~~~Le-~~Gad~IvIaCNTAH~--~~d~l~~~~~vPil~I----------------------id~t~~~i~~~~~k~~~~ 212 (241)
++.|. +.+++.|+.+..+... ..+.+ +..++|+|.+ ...+++.+.+.+.
T Consensus 67 ~~~l~~~~~v~~iig~~~s~~~~~~~~~~-~~~~iP~v~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~g~----- 140 (385)
T 1pea_A 67 AEDFIRNRGVRFLVGCYMSHTRKAVMPVV-ERADALLCYPTPYEGFEYSPNIVYGGPAPNQNSAPLAAYLIRHYG----- 140 (385)
T ss_dssp HHHHHHTTCCCEEEECCSHHHHHHHHHHH-HHTTCEEEECSCCCCCCCCTTEEECSCCGGGTHHHHHHHHHTTTC-----
T ss_pred HHHHHhhCCcEEEECCCchHHHHHHHHHH-HhcCceEEECCcccCccCCCCEEEecCChHHhHHHHHHHHHHccC-----
Confidence 34555 4899999988665432 23333 3345555532 1234555555543
Q ss_pred CCCCEEEEEecHHH---HhhhhHHHHHHhcCC
Q 026201 213 GSPLRIGVLAKNAI---LTAGFYQEKLQHEDC 241 (241)
Q Consensus 213 ~~~~rVGLLaT~~T---~~s~~Y~~~L~~~G~ 241 (241)
+||++++.+.. -...-|++.+++.|+
T Consensus 141 ---~~ia~i~~~~~~~~~~~~~~~~~l~~~G~ 169 (385)
T 1pea_A 141 ---ERVVFIGSDYIYPRESNHVMRHLYRQHGG 169 (385)
T ss_dssp ---SEEEEEEESSHHHHHHHHHHHHHHHHTTC
T ss_pred ---cEEEEEeCCChHHHHHHHHHHHHHHHcCC
Confidence 49999986432 233557888888774
No 138
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=76.12 E-value=21 Score=30.33 Aligned_cols=20 Identities=10% Similarity=0.074 Sum_probs=13.7
Q ss_pred HHHHHHhCCcEEEEeCCchh
Q 026201 158 RVFLEKAGARCIVMPCHLSH 177 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH 177 (241)
++.|...|+|.|++......
T Consensus 53 i~~li~~~vdgiii~~~~~~ 72 (316)
T 1tjy_A 53 VNNFVNQGYDAIIVSAVSPD 72 (316)
T ss_dssp HHHHHHTTCSEEEECCSSSS
T ss_pred HHHHHHcCCCEEEEeCCCHH
Confidence 35667789998887655443
No 139
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=75.66 E-value=26 Score=30.01 Aligned_cols=43 Identities=16% Similarity=0.077 Sum_probs=22.6
Q ss_pred HHHHHHHHhcCCCCCCCCCCEEEEEecHH-----HHhhhhHHHHHHhcC
Q 026201 197 CVAKELKEANMKPLEAGSPLRIGVLAKNA-----ILTAGFYQEKLQHED 240 (241)
Q Consensus 197 ~t~~~i~~~~~k~~~~~~~~rVGLLaT~~-----T~~s~~Y~~~L~~~G 240 (241)
.+++++.+.+.+ .+.+..++|++++... ..+..-|++.++++|
T Consensus 128 ~a~~~L~~~g~~-~~~g~~~~i~~i~g~~~~~~~~~R~~Gf~~~l~~~~ 175 (350)
T 3h75_A 128 RMLKELLHKLGP-VPAGHGIELLAFSGLKVTPAAQLRERGLRRALAEHP 175 (350)
T ss_dssp HHHHHHHHHHCC-CCSSCCEEEEEEESCTTSHHHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhhh-hcCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHCC
Confidence 456666666511 0111124899996431 223344777887765
No 140
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=75.58 E-value=16 Score=28.43 Aligned_cols=90 Identities=17% Similarity=0.163 Sum_probs=54.6
Q ss_pred eCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhCC
Q 026201 87 GGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGA 166 (241)
Q Consensus 87 GGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~Le~~Ga 166 (241)
.|+|...+.+.+.++.+..... .+++|+..- +..|.. ...+.++..+.+.+.++.+.+.|+
T Consensus 40 ~g~~G~~~~~~~~~~~~~~~~~-~pd~Vii~~---------G~ND~~---------~~~~~~~~~~~l~~li~~~~~~~~ 100 (190)
T 1ivn_A 40 ASISGDTSQQGLARLPALLKQH-QPRWVLVEL---------GGNDGL---------RGFQPQQTEQTLRQILQDVKAANA 100 (190)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHH-CCSEEEEEC---------CTTTTS---------SSCCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCCchHHHHHHHHHHHHHhc-CCCEEEEEe---------eccccc---------cCCCHHHHHHHHHHHHHHHHHcCC
Confidence 3776666667777665544332 457777651 112211 122456677788888899998899
Q ss_pred cEEEEe----CCch-------hhhHHHHhccCCCCeeecc
Q 026201 167 RCIVMP----CHLS-------HIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 167 d~IvIa----CNTA-------H~~~d~l~~~~~vPil~Ii 195 (241)
++|++. .+.. ..++.++.+..+++++++-
T Consensus 101 ~vil~~~~~p~~~~~~~~~~~n~~~~~~a~~~~v~~iD~~ 140 (190)
T 1ivn_A 101 EPLLMQIRLPANYGRRYNEAFSAIYPKLAKEFDVPLLPFF 140 (190)
T ss_dssp EEEEECCCCCGGGCHHHHHHHHHHHHHHHHHTTCCEECCT
T ss_pred CEEEEeccCCcchhHHHHHHHHHHHHHHHHHcCCeEEccH
Confidence 988874 2211 1123555666789999975
No 141
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=72.63 E-value=7.2 Score=32.31 Aligned_cols=73 Identities=5% Similarity=-0.024 Sum_probs=43.4
Q ss_pred HHHHhCCcEEEEeCCchhh-hHHHHhccCCCCeeec-----------------cHHHHHHHHHhcCCCCCCCCCCEEEEE
Q 026201 160 FLEKAGARCIVMPCHLSHI-WHDEVCKGCSVPFLHV-----------------SECVAKELKEANMKPLEAGSPLRIGVL 221 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~-~~d~l~~~~~vPil~I-----------------id~t~~~i~~~~~k~~~~~~~~rVGLL 221 (241)
.|...++|.|++....... .+.+.. ..++|+|-+ ...+++++.+.|.+ ||+++
T Consensus 63 ~l~~~~vdgiIi~~~~~~~~~~~~~~-~~~iPvV~~~~~~~~~~~V~~D~~~~~~~a~~~L~~~G~~--------~i~~i 133 (289)
T 3g85_A 63 ISKENSFDAAIIANISNYDLEYLNKA-SLTLPIILFNRLSNKYSSVNVDNYKMGEKASLLFAKKRYK--------SAAAI 133 (289)
T ss_dssp GSTTTCCSEEEESSCCHHHHHHHHHC-CCSSCEEEESCCCSSSEEEEECHHHHHHHHHHHHHHTTCC--------BCEEE
T ss_pred HHhccCCCEEEEecCCcccHHHHHhc-cCCCCEEEECCCCCCCCEEEeCHHHHHHHHHHHHHHcCCC--------EEEEE
Confidence 4567788887776554332 122221 346776653 33566777777655 99999
Q ss_pred ecHH-----HHhhhhHHHHHHhcCC
Q 026201 222 AKNA-----ILTAGFYQEKLQHEDC 241 (241)
Q Consensus 222 aT~~-----T~~s~~Y~~~L~~~G~ 241 (241)
+.+. ..+..-|.+.++++|+
T Consensus 134 ~~~~~~~~~~~R~~gf~~~l~~~~~ 158 (289)
T 3g85_A 134 LTESLNDAMDNRNKGFIETCHKNGI 158 (289)
T ss_dssp ECCCSSHHHHHHHHHHHHHHHHTTC
T ss_pred eCCcccccHHHHHHHHHHHHHHcCC
Confidence 7532 2233447788887763
No 142
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=69.99 E-value=20 Score=29.92 Aligned_cols=73 Identities=15% Similarity=0.031 Sum_probs=45.4
Q ss_pred HHHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCeeecc----HHHHHHHHHhcCCCCCCCCCCEEEEEec
Q 026201 156 RKRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFLHVS----ECVAKELKEANMKPLEAGSPLRIGVLAK 223 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil~Ii----d~t~~~i~~~~~k~~~~~~~~rVGLLaT 223 (241)
+.++.+++.|+|.|.+..-+.. .+..++++.+++|++--. ...++.+.+.|.. .| ++||
T Consensus 39 ~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad--------~V-~ig~ 109 (247)
T 3tdn_A 39 DWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGAD--------KV-SINT 109 (247)
T ss_dssp HHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCS--------EE-CCSH
T ss_pred HHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCC--------ee-ehhh
Confidence 4556789999999988654332 245788888999987641 1335555666654 44 5677
Q ss_pred HHHHhhhhHHHHHH
Q 026201 224 NAILTAGFYQEKLQ 237 (241)
Q Consensus 224 ~~T~~s~~Y~~~L~ 237 (241)
..--...+..+..+
T Consensus 110 ~~l~dp~~~~~~~~ 123 (247)
T 3tdn_A 110 AAVENPSLITQIAQ 123 (247)
T ss_dssp HHHHCTHHHHHHHH
T ss_pred HHhhChHHHHHHHH
Confidence 65444444444433
No 143
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=69.73 E-value=5.8 Score=37.84 Aligned_cols=57 Identities=11% Similarity=0.032 Sum_probs=43.2
Q ss_pred CHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhhHHH----Hhcc-----CCCCeeeccHHHHHHH
Q 026201 146 DDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDE----VCKG-----CSVPFLHVSECVAKEL 202 (241)
Q Consensus 146 d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~----l~~~-----~~vPil~Iid~t~~~i 202 (241)
+.+.-.+...+.++.+++.|||+||-+|..=+.-++. +.+. .++|++|+++-++.++
T Consensus 429 ~~e~s~~i~~~k~~~a~~tgAd~IvT~Cp~C~~~l~~~q~~~~k~~g~~~~~ipV~h~~eLLa~Al 494 (514)
T 3kwl_A 429 NEASGLLQCAHLRYLGIDLGADFLIAHSLGLFYAFENLSLKASKIYKRDNDNTPTLFLPQIALMAM 494 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCSEEEESCHHHHHHHTTTHHHHHTTSCSCCCCCCEECHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEecCHHHHHHHHhHhHHHHHhhCCCCCCCcEeeHHHHHHHHc
Confidence 4455555666777888999999999999988876654 4332 4799999998887665
No 144
>2h4a_A YRAM (HI1655); perplasmic binding protein, lipoprotein; 1.35A {Haemophilus influenzae} PDB: 3ckm_A
Probab=69.70 E-value=57 Score=28.52 Aligned_cols=76 Identities=13% Similarity=0.039 Sum_probs=44.6
Q ss_pred HHHHHHHhCCcEEEEeCCchhhh-HHHHh-ccCCCCeeec----------------------cHHHHHHHHHhcCCCCCC
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIW-HDEVC-KGCSVPFLHV----------------------SECVAKELKEANMKPLEA 212 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~-~d~l~-~~~~vPil~I----------------------id~t~~~i~~~~~k~~~~ 212 (241)
.++.|.+.||++|+=|..+.... .-.+. +..++|+|.. .+.+++.+.+.|.|
T Consensus 48 ~~~~l~~~~v~~IiGp~~s~~~~a~~~~~~~~~~vp~i~~~~~~~~~~~~~~~~f~~~~~~~~~~~a~~a~~~g~k---- 123 (325)
T 2h4a_A 48 IIAQAKQAGIKTLVGPLLKQNLDVILADPAQIQGMDVLALNATPNSRAIPQLCYYGLSPEDEAESAANKMWNDGVR---- 123 (325)
T ss_dssp HHHHHHHTTCCEEECCCSHHHHHHHHHCGGGGTTCEEEESCCCSSCCCCTTEEECCCCHHHHHHHHHHHHHHTTCC----
T ss_pred HHHHHHHCCCCEEEeeCCHHHHHHHHhhhhccCCCcEEECCCCccccCCCCeEEEECCHHHHHHHHHHHHHHcCCC----
Confidence 34567778898888887766543 12222 3345555542 23455566666655
Q ss_pred CCCCEEEEEecHHHHhhh---hHHHHHHhcC
Q 026201 213 GSPLRIGVLAKNAILTAG---FYQEKLQHED 240 (241)
Q Consensus 213 ~~~~rVGLLaT~~T~~s~---~Y~~~L~~~G 240 (241)
||++|+.+...-.+ .|++.+++.|
T Consensus 124 ----~vail~~~~~yG~~~~~~F~~~~~~~G 150 (325)
T 2h4a_A 124 ----NPLVAMPQNDLGQRVGNAFNVRWQQLA 150 (325)
T ss_dssp ----SCEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ----eEEEEEcCCcHHHHHHHHHHHHHHHcC
Confidence 89999876554433 3556665553
No 145
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=69.05 E-value=7.1 Score=36.10 Aligned_cols=37 Identities=16% Similarity=0.201 Sum_probs=30.8
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhh--HHHHhccCCCCee
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIW--HDEVCKGCSVPFL 192 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~--~d~l~~~~~vPil 192 (241)
+.+++|+++|||.|=+++++.-.. +.+|++.+++|++
T Consensus 50 ~Qi~~l~~aG~diVRvavp~~~~a~al~~I~~~~~vPlv 88 (366)
T 3noy_A 50 NQIKRLYEAGCEIVRVAVPHKEDVEALEEIVKKSPMPVI 88 (366)
T ss_dssp HHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHcCCCEEEeCCCChHHHHHHHHHHhcCCCCEE
Confidence 345689999999999999996553 5889999999974
No 146
>3qek_A NMDA glutamate receptor subunit; amino terminal domain, ION channel, NMDA receptor, allosteri modulation, phenylethanolamine, polyamine; HET: NAG BMA; 2.00A {Xenopus laevis} PDB: 3qel_A* 3qem_A* 3q41_A*
Probab=69.01 E-value=29 Score=30.13 Aligned_cols=77 Identities=6% Similarity=-0.058 Sum_probs=41.4
Q ss_pred HHHHHHHHhCCcEEEEe-----CCchh-hhHHHHhccCCCCeeec--------------------------cHHHHHHHH
Q 026201 156 RKRVFLEKAGARCIVMP-----CHLSH-IWHDEVCKGCSVPFLHV--------------------------SECVAKELK 203 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIa-----CNTAH-~~~d~l~~~~~vPil~I--------------------------id~t~~~i~ 203 (241)
..++.|.+.|+++|+=| .+|.. .....+.+..++|+|.. ..+.++.++
T Consensus 56 ~~~~~Li~~~V~aiiG~~~~~~~~s~~~~a~~~~~~~~~iP~is~~~~~~~ls~~~~~~~~fr~~~~~~~~~~a~~~~~~ 135 (384)
T 3qek_A 56 SVCEDLISSQVYAILVSHPPAPTDHLTPTPISYTAGFYRIPVIGLTTRMSIYSDKSIHLSFLRTVPPYSHQALVWFEMMR 135 (384)
T ss_dssp HHHHHTGGGTEEEEEECC--------CCHHHHHHHHTTTCCEEESSCCCGGGGCSSSCTTEEESSCCGGGHHHHHHHHHH
T ss_pred HHHHHHHHcCceEEEEecCCCCccchhHHHHHHHHhcCCCCEEecccCchhccCcccCCceEEecCChHHHHHHHHHHHH
Confidence 34455666699998884 22222 22355656667777652 223444454
Q ss_pred HhcCCCCCCCCCCEEEEEecHHHHhh---hhHHHHHHhcC
Q 026201 204 EANMKPLEAGSPLRIGVLAKNAILTA---GFYQEKLQHED 240 (241)
Q Consensus 204 ~~~~k~~~~~~~~rVGLLaT~~T~~s---~~Y~~~L~~~G 240 (241)
..+. ++|+++..+...-. ..+++.+++.|
T Consensus 136 ~~gw--------~~v~ii~~d~~~G~~~~~~~~~~~~~~g 167 (384)
T 3qek_A 136 LFNW--------NHVILIVSDDHEGRAAQKKLETLLEGKE 167 (384)
T ss_dssp HTTC--------CEEEEEEESSHHHHHHHHHHHHHHC---
T ss_pred HcCC--------eEEEEEEEcCcccHHHHHHHHHHHHhcc
Confidence 4443 49999997554333 34666666655
No 147
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=69.00 E-value=63 Score=28.76 Aligned_cols=120 Identities=13% Similarity=0.008 Sum_probs=69.4
Q ss_pred ChHHHHHHHHHHHHHhccC--CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhCCc
Q 026201 90 SVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGAR 167 (241)
Q Consensus 90 Gp~AT~~fy~kI~~~t~~d--~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~Le~~Gad 167 (241)
+.+--.+|...|++.+++. +..++.+--.|. +.. ....+.++ ..+.++.|++.|+|
T Consensus 197 slenR~r~~~eiv~aVR~avG~d~pV~vRls~~----------~~~--------~~g~~~~~----~~~la~~L~~~Gvd 254 (349)
T 3hgj_A 197 SLENRMRFPLQVAQAVREVVPRELPLFVRVSAT----------DWG--------EGGWSLED----TLAFARRLKELGVD 254 (349)
T ss_dssp SHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESC----------CCS--------TTSCCHHH----HHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHhcCCceEEEEeccc----------ccc--------CCCCCHHH----HHHHHHHHHHcCCC
Confidence 5666677888888888765 344444411110 000 00112222 34566789999999
Q ss_pred EEEEeCCch---------h----hhHHHHhccCCCCeeeccH----HHHHHHHHhc-CCCCCCCCCCEEEEEecHHHHhh
Q 026201 168 CIVMPCHLS---------H----IWHDEVCKGCSVPFLHVSE----CVAKELKEAN-MKPLEAGSPLRIGVLAKNAILTA 229 (241)
Q Consensus 168 ~IvIaCNTA---------H----~~~d~l~~~~~vPil~Iid----~t~~~i~~~~-~k~~~~~~~~rVGLLaT~~T~~s 229 (241)
+|-+.+-.. . .+..++++.+++|++.... ..++++.+.+ .+ .--+|+.....-
T Consensus 255 ~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD---------~V~iGR~~lanP 325 (349)
T 3hgj_A 255 LLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSAD---------LVLLGRVLLRDP 325 (349)
T ss_dssp EEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCS---------EEEESTHHHHCT
T ss_pred EEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCce---------EEEecHHHHhCc
Confidence 999985110 1 2357888888999987642 3455555554 32 445677776666
Q ss_pred hhHHHHHHhcC
Q 026201 230 GFYQEKLQHED 240 (241)
Q Consensus 230 ~~Y~~~L~~~G 240 (241)
++..+..+..|
T Consensus 326 dl~~k~~~~l~ 336 (349)
T 3hgj_A 326 YFPLRAAKALG 336 (349)
T ss_dssp THHHHHHHHTT
T ss_pred hHHHHHHHHCC
Confidence 66655554443
No 148
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=68.88 E-value=17 Score=30.73 Aligned_cols=59 Identities=19% Similarity=0.054 Sum_probs=41.7
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc-----------HH---HHHHHHHhcCCCCCCCCCCEEE
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS-----------EC---VAKELKEANMKPLEAGSPLRIG 219 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii-----------d~---t~~~i~~~~~k~~~~~~~~rVG 219 (241)
+.+.++..++.||..|-+. + -...+++++.+++|++.+. .+ -++++.+.|.+ .|.
T Consensus 38 ~~~~A~a~~~~Ga~~i~~~--~-~~~i~~ir~~v~~Pvig~~k~~~~~~~~~I~~~~~~i~~~~~aGad--------~I~ 106 (229)
T 3q58_A 38 VAAMAQAAASAGAVAVRIE--G-IENLRTVRPHLSVPIIGIIKRDLTGSPVRITPYLQDVDALAQAGAD--------IIA 106 (229)
T ss_dssp HHHHHHHHHHTTCSEEEEE--S-HHHHHHHGGGCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCS--------EEE
T ss_pred HHHHHHHHHHCCCcEEEEC--C-HHHHHHHHHhcCCCEEEEEeecCCCCceEeCccHHHHHHHHHcCCC--------EEE
Confidence 4455677899999998863 2 2346889999999987432 22 35667778876 787
Q ss_pred EEec
Q 026201 220 VLAK 223 (241)
Q Consensus 220 LLaT 223 (241)
+.+|
T Consensus 107 l~~~ 110 (229)
T 3q58_A 107 FDAS 110 (229)
T ss_dssp EECC
T ss_pred ECcc
Confidence 7766
No 149
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=68.72 E-value=29 Score=27.51 Aligned_cols=78 Identities=14% Similarity=0.118 Sum_probs=47.6
Q ss_pred eEEEEe-CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHH
Q 026201 82 TVGIVG-GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVF 160 (241)
Q Consensus 82 ~IGIIG-GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~ 160 (241)
.+-++- |.+...+..++..+.+....+..+.+|+..- +..|.... .......++..+.+.+.++.
T Consensus 43 ~~~v~n~g~~G~~~~~~~~~~~~~~~~~~~pd~vvi~~---------G~ND~~~~-----~~~~~~~~~~~~~l~~~i~~ 108 (240)
T 3mil_A 43 KMDILQRGFKGYTSRWALKILPEILKHESNIVMATIFL---------GANDACSA-----GPQSVPLPEFIDNIRQMVSL 108 (240)
T ss_dssp TEEEEEEECTTCCHHHHHHHHHHHHHHCCCEEEEEEEC---------CTTTTSSS-----STTCCCHHHHHHHHHHHHHH
T ss_pred ceEEEecCcCcccHHHHHHHHHHHhcccCCCCEEEEEe---------ecCcCCcc-----CCCCCCHHHHHHHHHHHHHH
Confidence 344444 6777777777777766554434677777651 11121100 01223456778888888999
Q ss_pred HHHhCCcEEEEeC
Q 026201 161 LEKAGARCIVMPC 173 (241)
Q Consensus 161 Le~~Gad~IvIaC 173 (241)
+.+.|+++|++..
T Consensus 109 ~~~~~~~vil~~~ 121 (240)
T 3mil_A 109 MKSYHIRPIIIGP 121 (240)
T ss_dssp HHHTTCEEEEECC
T ss_pred HHHcCCeEEEEcC
Confidence 9999998888753
No 150
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=67.65 E-value=11 Score=31.23 Aligned_cols=83 Identities=13% Similarity=0.168 Sum_probs=47.6
Q ss_pred eEEEEeCCChHHHHHHHHHHHHHhccC-CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHH
Q 026201 82 TVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVF 160 (241)
Q Consensus 82 ~IGIIGGmGp~AT~~fy~kI~~~t~~d-~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~ 160 (241)
.+||| ||..|-....++..+....= -..++-+.|-- + ..+.+.+ .++.
T Consensus 7 ~V~Ii--mgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaH----------R---------------tp~~l~~----~~~~ 55 (166)
T 3oow_A 7 QVGVI--MGSKSDWSTMKECCDILDNLGIGYECEVVSAH----------R---------------TPDKMFD----YAET 55 (166)
T ss_dssp EEEEE--ESSGGGHHHHHHHHHHHHHTTCEEEEEECCTT----------T---------------CHHHHHH----HHHH
T ss_pred eEEEE--ECcHHhHHHHHHHHHHHHHcCCCEEEEEEcCc----------C---------------CHHHHHH----HHHH
Confidence 68888 66666677777776655532 12233333311 1 1223333 3345
Q ss_pred HHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 161 LEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 161 Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
+++.|+++|+....-+-..---+...+..|+|++.
T Consensus 56 ~~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP 90 (166)
T 3oow_A 56 AKERGLKVIIAGAGGAAHLPGMVAAKTTLPVLGVP 90 (166)
T ss_dssp TTTTTCCEEEEEECSSCCHHHHHHHTCSSCEEEEE
T ss_pred HHhCCCcEEEEECCcchhhHHHHHhccCCCEEEee
Confidence 67788886665544444444666777888888863
No 151
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=65.86 E-value=17 Score=29.96 Aligned_cols=62 Identities=15% Similarity=0.138 Sum_probs=39.3
Q ss_pred HHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH---HHHHHHHhcCCCCCCCCCCEEEEEecHHHHhh
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC---VAKELKEANMKPLEAGSPLRIGVLAKNAILTA 229 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~---t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s 229 (241)
.++.+ +.|+|+|+-.--|+ +.|++.+++|++.|--. ..+.+++..- .+.|||++|-+.++..
T Consensus 44 ~a~~~-~~~~dVIISRGgta----~~lr~~~~iPVV~I~~s~~Dil~al~~a~~------~~~kIavvg~~~~~~~ 108 (196)
T 2q5c_A 44 IAFGL-QDEVDAIISRGATS----DYIKKSVSIPSISIKVTRFDTMRAVYNAKR------FGNELALIAYKHSIVD 108 (196)
T ss_dssp HHHHH-TTTCSEEEEEHHHH----HHHHTTCSSCEEEECCCHHHHHHHHHHHGG------GCSEEEEEEESSCSSC
T ss_pred HHHHh-cCCCeEEEECChHH----HHHHHhCCCCEEEEcCCHhHHHHHHHHHHh------hCCcEEEEeCcchhhH
Confidence 34556 79999777665554 56778889999987322 2333333321 1349999998776543
No 152
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=65.55 E-value=29 Score=30.16 Aligned_cols=105 Identities=8% Similarity=0.072 Sum_probs=47.3
Q ss_pred cchhhccCC--eEEEEeCCChHHHH--HHHHHHHHHhccCCCCCEEEecCccc--hHHhhhcCCChhhhhcccCCCCCCC
Q 026201 73 SDALLNQAN--TVGIVGGASVDSTL--NLLGKLVQLSGEENDFPFLLCSDPLL--NKELLSHDRSSFSSLNCKGGGVQLD 146 (241)
Q Consensus 73 ~~~~~~~~k--~IGIIGGmGp~AT~--~fy~kI~~~t~~d~~~~~vi~S~p~i--~d~ll~~~~~~~~~~~~~~~~~~~d 146 (241)
...+++-|| +|||| |.|..+.. .-|+.+-......+..+++-..++.. .+++... +.. ...-.|
T Consensus 16 ~~~~~~~MkkirvgiI-G~G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~----~g~-----~~~y~d 85 (393)
T 4fb5_A 16 ENLYFQSMKPLGIGLI-GTGYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGE----FGF-----EKATAD 85 (393)
T ss_dssp --------CCCEEEEE-CCSHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHH----HTC-----SEEESC
T ss_pred cCccccCCCCccEEEE-cCCHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHH----hCC-----CeecCC
Confidence 455666677 68999 67777653 12222222222225666776555432 1111100 000 001123
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEeCCch-hhh--HHHHhccC----CCCeeeccHH
Q 026201 147 DSLIVENLRRKRVFLEKAGARCIVMPCHLS-HIW--HDEVCKGC----SVPFLHVSEC 197 (241)
Q Consensus 147 ~~~i~~~l~~~~~~Le~~Gad~IvIaCNTA-H~~--~d~l~~~~----~vPil~Iid~ 197 (241)
+++ .|++..+|+|+|++.+. |+- ...+++.. .-|+-.=++.
T Consensus 86 ~~e----------ll~~~~iDaV~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~e 133 (393)
T 4fb5_A 86 WRA----------LIADPEVDVVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYAD 133 (393)
T ss_dssp HHH----------HHHCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHH
T ss_pred HHH----------HhcCCCCcEEEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHH
Confidence 433 36677899999998654 442 25566653 3476544443
No 153
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=65.36 E-value=34 Score=28.34 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=46.5
Q ss_pred HHHHHHHhCCcEEEEeCCchhh--------hHHHHhccCCCCeeec---c-HHHHHHHHHhcCCCCCCCCCCEEEEEecH
Q 026201 157 KRVFLEKAGARCIVMPCHLSHI--------WHDEVCKGCSVPFLHV---S-ECVAKELKEANMKPLEAGSPLRIGVLAKN 224 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~--------~~d~l~~~~~vPil~I---i-d~t~~~i~~~~~k~~~~~~~~rVGLLaT~ 224 (241)
.++.++++|||.|.+-.-+.+. ...++++.+++|++-. - ..-++.+.+.|.. .| ++++.
T Consensus 35 ~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad--------~V-~lg~~ 105 (253)
T 1thf_D 35 LGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGAD--------KV-SINTA 105 (253)
T ss_dssp HHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCS--------EE-EESHH
T ss_pred HHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCC--------EE-EEChH
Confidence 3467899999998776544331 2366788889998742 1 1235556666664 55 67887
Q ss_pred HHHhhhhHHHHHHhc
Q 026201 225 AILTAGFYQEKLQHE 239 (241)
Q Consensus 225 ~T~~s~~Y~~~L~~~ 239 (241)
..-....+.+.++..
T Consensus 106 ~l~~p~~~~~~~~~~ 120 (253)
T 1thf_D 106 AVENPSLITQIAQTF 120 (253)
T ss_dssp HHHCTHHHHHHHHHH
T ss_pred HHhChHHHHHHHHHc
Confidence 665555565555543
No 154
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=64.56 E-value=31 Score=26.26 Aligned_cols=95 Identities=13% Similarity=0.063 Sum_probs=56.6
Q ss_pred eEEEEe-CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHH
Q 026201 82 TVGIVG-GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVF 160 (241)
Q Consensus 82 ~IGIIG-GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~ 160 (241)
.+-++. |.+...+.+++.++-+..... .+.+|+..-- ..|.. ...+.+...+.+.+.++.
T Consensus 38 ~~~v~n~g~~G~~~~~~~~~~~~~~~~~-~pd~vvi~~G-~ND~~-----------------~~~~~~~~~~~~~~~i~~ 98 (185)
T 3hp4_A 38 DIVLINASISGETSGGALRRLDALLEQY-EPTHVLIELG-ANDGL-----------------RGFPVKKMQTNLTALVKK 98 (185)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHHHHHH-CCSEEEEECC-HHHHH-----------------TTCCHHHHHHHHHHHHHH
T ss_pred cEEEEECCcCCccHHHHHHHHHHHHhhc-CCCEEEEEee-cccCC-----------------CCcCHHHHHHHHHHHHHH
Confidence 355553 666666777777766554432 5677776511 12221 112345677788888899
Q ss_pred HHHhCCcEEEEe----CCch-------hhhHHHHhccCCCCeeecc
Q 026201 161 LEKAGARCIVMP----CHLS-------HIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 161 Le~~Gad~IvIa----CNTA-------H~~~d~l~~~~~vPil~Ii 195 (241)
+.+.|++++++. .|-. ...+.++.+..+++++++.
T Consensus 99 ~~~~~~~vvl~~~~~p~~~~~~~~~~~~~~~~~~a~~~~~~~vd~~ 144 (185)
T 3hp4_A 99 SQAANAMTALMEIYIPPNYGPRYSKMFTSSFTQISEDTNAHLMNFF 144 (185)
T ss_dssp HHHTTCEEEEECCCCCSTTCHHHHHHHHHHHHHHHHHHCCEEECCT
T ss_pred HHHcCCeEEEEeCCCCCcccHHHHHHHHHHHHHHHHHcCCEEEcch
Confidence 999999998874 2211 1233445555678888764
No 155
>1u11_A PURE (N5-carboxyaminoimidazole ribonucleotide MUT; acidophIle, protein stability, lyase; HET: CIT; 1.55A {Acetobacter aceti} SCOP: c.23.8.1 PDB: 2fwj_A* 2fw1_A* 2fwb_A 2fwa_A 2fw9_A 2fw7_A 2fw6_A 2fwp_A* 2fwi_A* 2fw8_A
Probab=64.21 E-value=13 Score=31.06 Aligned_cols=86 Identities=17% Similarity=0.075 Sum_probs=46.4
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC-CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d-~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
...+||| ||..+-....++..+....= -..++-+.|--..| +. +.+.+
T Consensus 21 ~~~V~Ii--mGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p-------------------------~~----l~~~~ 69 (182)
T 1u11_A 21 APVVGII--MGSQSDWETMRHADALLTELEIPHETLIVSAHRTP-------------------------DR----LADYA 69 (182)
T ss_dssp CCSEEEE--ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCH-------------------------HH----HHHHH
T ss_pred CCEEEEE--ECcHHHHHHHHHHHHHHHHcCCCeEEEEEcccCCH-------------------------HH----HHHHH
Confidence 4578888 66677777777776666532 22344444411111 22 22333
Q ss_pred HHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccH
Q 026201 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid 196 (241)
+..++.|+++|+....-+-..---+...+..|+|++.-
T Consensus 70 ~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~ 107 (182)
T 1u11_A 70 RTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPV 107 (182)
T ss_dssp HHTTTTTCCEEEEEEESSCCHHHHHHHHCSSCEEEEEE
T ss_pred HHHHhCCCcEEEEecCchhhhHHHHHhccCCCEEEeeC
Confidence 45567788854433332222335556667788887643
No 156
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=64.09 E-value=22 Score=29.48 Aligned_cols=85 Identities=14% Similarity=0.104 Sum_probs=48.1
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC-CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d-~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
...+||| ||..|-....++..+....= -..++-+.|-- + ..+.+.+ .+
T Consensus 7 ~~~V~Ii--mgS~SD~~v~~~a~~~L~~~gi~~ev~V~SaH----------R---------------~p~~~~~----~~ 55 (174)
T 3lp6_A 7 RPRVGVI--MGSDSDWPVMADAAAALAEFDIPAEVRVVSAH----------R---------------TPEAMFS----YA 55 (174)
T ss_dssp CCSEEEE--ESCGGGHHHHHHHHHHHHHTTCCEEEEECCTT----------T---------------CHHHHHH----HH
T ss_pred CCeEEEE--ECcHHhHHHHHHHHHHHHHcCCCEEEEEECCC----------C---------------CHHHHHH----HH
Confidence 3468888 66666677777776665532 22334444411 1 1222333 34
Q ss_pred HHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
+..++.|+++|+....-+-..---+...+..|+|++.
T Consensus 56 ~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP 92 (174)
T 3lp6_A 56 RGAAARGLEVIIAGAGGAAHLPGMVAAATPLPVIGVP 92 (174)
T ss_dssp HHHHHHTCCEEEEEEESSCCHHHHHHHHCSSCEEEEE
T ss_pred HHHHhCCCCEEEEecCchhhhHHHHHhccCCCEEEee
Confidence 4567889995554444433334566667888888863
No 157
>3hsy_A Glutamate receptor 2; ligand-gated ION channel, synapse, cell CELL membrane, endoplasmic reticulum, glycoprotein, ION TRA ionic channel; HET: NAG BMA; 1.75A {Rattus norvegicus} PDB: 3h5v_A* 3h5w_A 3o2j_A* 2wjw_A* 2wjx_A 3n6v_A
Probab=63.57 E-value=73 Score=27.56 Aligned_cols=73 Identities=8% Similarity=0.029 Sum_probs=44.0
Q ss_pred HHHHHhCCcEEEEeCCchhhh-HHHHhccCCCCeee------------------ccHHHHHHHHHhcCCCCCCCCCCEEE
Q 026201 159 VFLEKAGARCIVMPCHLSHIW-HDEVCKGCSVPFLH------------------VSECVAKELKEANMKPLEAGSPLRIG 219 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~------------------Iid~t~~~i~~~~~k~~~~~~~~rVG 219 (241)
..|.+.|+.+|+=|.++.... ...+.+..++|+|+ ...+.++.++..+.+ +|+
T Consensus 54 ~~li~~~V~aiiG~~~S~~~~av~~~~~~~~ip~is~~~~~~~~~~~~~~~~p~~~~a~~~~~~~~gw~--------~va 125 (376)
T 3hsy_A 54 CSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTDGTHPFVIQMRPDLKGALLSLIEYYQWD--------KFA 125 (376)
T ss_dssp HHHHHTTCSEEEECCCTTTHHHHHHHHHHHTCEEEECSCCCCSCCTTEEECSCCCHHHHHHHHHHTTCC--------EEE
T ss_pred HHHHhcCcEEEECCCchhHHHHHHHHhccCcCceeecCCCCcccCCceEEeCccHHHHHHHHHHhcCCC--------EEE
Confidence 445556999888877765543 35566666777764 234566666655544 999
Q ss_pred EEecHHHHhh---hhHHHHHHhcC
Q 026201 220 VLAKNAILTA---GFYQEKLQHED 240 (241)
Q Consensus 220 LLaT~~T~~s---~~Y~~~L~~~G 240 (241)
++. +...-. ..+.+.+++.|
T Consensus 126 ii~-d~~~g~~~~~~~~~~~~~~g 148 (376)
T 3hsy_A 126 YLY-DSDRGLSTLQAVLDSAAEKK 148 (376)
T ss_dssp EEE-CSTTCSHHHHHHHHHHHHHT
T ss_pred EEE-eCchhHHHHHHHHHHhhhcC
Confidence 998 433221 23445555554
No 158
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=62.70 E-value=28 Score=29.38 Aligned_cols=59 Identities=19% Similarity=0.040 Sum_probs=41.4
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeee-----------ccHH---HHHHHHHhcCCCCCCCCCCEEE
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH-----------VSEC---VAKELKEANMKPLEAGSPLRIG 219 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~-----------Iid~---t~~~i~~~~~k~~~~~~~~rVG 219 (241)
+.+.++..++.||..|-+ ++ -...+++++.+++|++. ++.+ -++++.+.|.+ .|.
T Consensus 38 ~~~~A~a~~~~Ga~~i~~--~~-~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~~~~~Gad--------~V~ 106 (232)
T 3igs_A 38 VAAMALAAEQAGAVAVRI--EG-IDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDALAQAGAA--------IIA 106 (232)
T ss_dssp HHHHHHHHHHTTCSEEEE--ES-HHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHHHHHHTCS--------EEE
T ss_pred HHHHHHHHHHCCCeEEEE--CC-HHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHHHHHcCCC--------EEE
Confidence 445567789999998876 32 23468899999999885 2223 35667778876 787
Q ss_pred EEec
Q 026201 220 VLAK 223 (241)
Q Consensus 220 LLaT 223 (241)
+.+|
T Consensus 107 l~~~ 110 (232)
T 3igs_A 107 VDGT 110 (232)
T ss_dssp EECC
T ss_pred ECcc
Confidence 7665
No 159
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=62.25 E-value=80 Score=27.54 Aligned_cols=26 Identities=12% Similarity=0.138 Sum_probs=16.9
Q ss_pred CEEEEEecHHHH---hhhhHHHHHHhcCC
Q 026201 216 LRIGVLAKNAIL---TAGFYQEKLQHEDC 241 (241)
Q Consensus 216 ~rVGLLaT~~T~---~s~~Y~~~L~~~G~ 241 (241)
+||++|..+... ....+++.+++.|+
T Consensus 165 ~~vail~~~~~~g~~~~~~~~~~~~~~g~ 193 (419)
T 3h5l_A 165 NKIAIITGPGIYSVNIANAIRDGAGEYGY 193 (419)
T ss_dssp SEEEEEECSSHHHHHHHHHHHHHGGGGTC
T ss_pred CEEEEEEcCcchhHHHHHHHHHHHHHcCC
Confidence 599999986542 23456666776663
No 160
>3ckm_A YRAM (HI1655), LPOA; periplasmic-binding protein, lipoprotein, unliganded, biosynthetic protein; 1.35A {Haemophilus influenzae} SCOP: c.93.1.1
Probab=61.32 E-value=75 Score=26.94 Aligned_cols=75 Identities=13% Similarity=0.099 Sum_probs=45.8
Q ss_pred HHHHHHhCCcEEEEeCCchhhh--HHHHhccCCCCeeec----------------------cHHHHHHHHHhcCCCCCCC
Q 026201 158 RVFLEKAGARCIVMPCHLSHIW--HDEVCKGCSVPFLHV----------------------SECVAKELKEANMKPLEAG 213 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH~~--~d~l~~~~~vPil~I----------------------id~t~~~i~~~~~k~~~~~ 213 (241)
.+.+.+.|+++|+=|..+.... ...+.+.-.+|++.. ....++.+.+.+.|
T Consensus 51 ~~~~~~~~v~~iiGp~~s~~~~a~~~~~~~~~~v~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~a~~~~~~g~k----- 125 (327)
T 3ckm_A 51 IAQAKQAGIKTLVGPLLKQNLDVILADPAQIQGMDVLALNATPNSRAIPQLCYYGLSPEDEAESAANKMWNDGVR----- 125 (327)
T ss_dssp HHHHHHTTCCEEECCCSHHHHHHHHHCGGGGTTCEEEESCCCTTCCCCTTEEECCCCHHHHHHHHHHHHHHTTCC-----
T ss_pred HHHHHHcCCeEEEEccccccchhhHHHHHhccCceEeccCcCcccccCCCeEEEecChHHHHHHHHHHHHhcCCe-----
Confidence 3567888999999886654432 344444445555442 33456666666655
Q ss_pred CCCEEEEEecHHHHhhh---hHHHHHHhcC
Q 026201 214 SPLRIGVLAKNAILTAG---FYQEKLQHED 240 (241)
Q Consensus 214 ~~~rVGLLaT~~T~~s~---~Y~~~L~~~G 240 (241)
+|+++..+...-.+ .|++.+++.|
T Consensus 126 ---~~~ii~~~~~yg~~~~~~f~~~~~~~G 152 (327)
T 3ckm_A 126 ---NPLVAMPQNDLGQRVGNAFNVRWQQLA 152 (327)
T ss_dssp ---SCEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ---eEEEEecCChHHHHHHHHHHHHHHHCC
Confidence 89999877654433 3556666554
No 161
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=60.52 E-value=26 Score=28.91 Aligned_cols=84 Identities=15% Similarity=0.101 Sum_probs=47.4
Q ss_pred CeEEEEeCCChHHHHHHHHHHHHHhccC-CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 81 NTVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 81 k~IGIIGGmGp~AT~~fy~kI~~~t~~d-~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
.++||| ||..|-..+.++..+....= -..++-+.|-- +. .+.+. +.++
T Consensus 7 ~~V~Ii--mgS~SD~~v~~~a~~~l~~~gi~~ev~V~SaH----------R~---------------p~~~~----~~~~ 55 (169)
T 3trh_A 7 IFVAIL--MGSDSDLSTMETAFTELKSLGIPFEAHILSAH----------RT---------------PKETV----EFVE 55 (169)
T ss_dssp CEEEEE--ESCGGGHHHHHHHHHHHHHTTCCEEEEECCTT----------TS---------------HHHHH----HHHH
T ss_pred CcEEEE--ECcHHhHHHHHHHHHHHHHcCCCEEEEEEccc----------CC---------------HHHHH----HHHH
Confidence 368888 66666667777776665532 22334444411 11 12233 3345
Q ss_pred HHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
..+..|+++|+...--+-..---+...+..|+|++.
T Consensus 56 ~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP 91 (169)
T 3trh_A 56 NADNRGCAVFIAAAGLAAHLAGTIAAHTLKPVIGVP 91 (169)
T ss_dssp HHHHTTEEEEEEEECSSCCHHHHHHHTCSSCEEEEE
T ss_pred HHHhCCCcEEEEECChhhhhHHHHHhcCCCCEEEee
Confidence 567789985554444333334566677888888863
No 162
>3saj_A Glutamate receptor 1; rossman fold, ION channel, membrane, transport protein; HET: NAG BMA MAN; 2.50A {Rattus norvegicus}
Probab=60.03 E-value=86 Score=27.16 Aligned_cols=75 Identities=8% Similarity=-0.006 Sum_probs=44.4
Q ss_pred HHHHHHHhCCcEEEEeCCchhhh-HHHHhccCCCCeeec------------------cHHHHHHHHHhcCCCCCCCCCCE
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIW-HDEVCKGCSVPFLHV------------------SECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~I------------------id~t~~~i~~~~~k~~~~~~~~r 217 (241)
.+..|.+.|+.+|+=|.++.... ...+.+..++|+|+. ..+.++.++..+.+ +
T Consensus 59 ~~~~l~~~~V~aiiG~~~S~~~~a~~~~~~~~~iP~is~~~~~~~~~~~~~~~~p~~~~a~~~~~~~~g~~--------~ 130 (384)
T 3saj_A 59 RFCSQFSKGVYAIFGFYERRTVNMLTSFCGALHVCFITPSFPVDTSNQFVLQLRPELQEALISIIDHYKWQ--------T 130 (384)
T ss_dssp HHHHHHHTTCSCEEECCCHHHHHHHHHHHHHHTCCEEECSCCCSSCCTTEEECSCCCHHHHHHHHHHTTCC--------E
T ss_pred HHHHHHhcCeEEEECCCCHHHHHHHHHHhccCCCCeEeccccCcCccCceEEecccHHHHHHHHHHHCCCc--------E
Confidence 34456667999988887765554 355555566776652 34556666555544 9
Q ss_pred EEEEecHHHHh---hhhHHHHHHhcC
Q 026201 218 IGVLAKNAILT---AGFYQEKLQHED 240 (241)
Q Consensus 218 VGLLaT~~T~~---s~~Y~~~L~~~G 240 (241)
|+++.-+ ..- ...+.+.+++.|
T Consensus 131 v~ii~d~-~~g~~~~~~~~~~~~~~g 155 (384)
T 3saj_A 131 FVYIYDA-DRGLSVLQRVLDTAAEKN 155 (384)
T ss_dssp EEEEECS-TTCSHHHHHHHHHHHHHT
T ss_pred EEEEEeC-chhHHHHHHHHHHhhhcC
Confidence 9999833 221 223455555555
No 163
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=59.67 E-value=81 Score=26.75 Aligned_cols=79 Identities=11% Similarity=0.020 Sum_probs=42.5
Q ss_pred HHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec-----------------------------cHHHHHHHHHh
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV-----------------------------SECVAKELKEA 205 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I-----------------------------id~t~~~i~~~ 205 (241)
.+.++.|...++|+|+. .-|.- .....+...++|++-. ++..++.+++.
T Consensus 59 ~~~~~~l~~~~~DlIia-i~t~a-a~a~~~~~~~iPVVf~~v~dp~~~~l~~~~~~~g~nvtGv~~~~~~~~~l~l~~~l 136 (302)
T 3lkv_A 59 VQIARQFVGENPDVLVG-IATPT-AQALVSATKTIPIVFTAVTDPVGAKLVKQLEQPGKNVTGLSDLSPVEQHVELIKEI 136 (302)
T ss_dssp HHHHHHHHTTCCSEEEE-ESHHH-HHHHHHHCSSSCEEEEEESCTTTTTSCSCSSSCCSSEEEEECCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCcEEEE-cCCHH-HHHHHhhcCCCCeEEEecCCcchhhhcccccCCCCcEEEEECCcCHHHHHHHHHHh
Confidence 34456788999998763 22221 1122233345676521 13445556554
Q ss_pred cCCCCCCCCCCEEEEEecHHHH----hhhhHHHHHHhcCC
Q 026201 206 NMKPLEAGSPLRIGVLAKNAIL----TAGFYQEKLQHEDC 241 (241)
Q Consensus 206 ~~k~~~~~~~~rVGLLaT~~T~----~s~~Y~~~L~~~G~ 241 (241)
. +..++||++..+..- ..+.+++.+++.|+
T Consensus 137 ~------P~~k~vgvi~~~~~~~s~~~~~~~~~~~~~~g~ 170 (302)
T 3lkv_A 137 L------PNVKSIGVVYNPGEANAVSLMELLKLSAAKHGI 170 (302)
T ss_dssp S------TTCCEEEEEECTTCHHHHHHHHHHHHHHHHTTC
T ss_pred C------CCCCEEEEEeCCCcccHHHHHHHHHHHHHHcCC
Confidence 2 124599999876533 33445555655553
No 164
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=59.54 E-value=37 Score=27.92 Aligned_cols=73 Identities=11% Similarity=-0.006 Sum_probs=45.1
Q ss_pred HHHHHHHhCCcEEEEeCCchh-------hhHHHHhccCCCCeee--ccH--HHHHHHHHhcCCCCCCCCCCEEEEEecHH
Q 026201 157 KRVFLEKAGARCIVMPCHLSH-------IWHDEVCKGCSVPFLH--VSE--CVAKELKEANMKPLEAGSPLRIGVLAKNA 225 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH-------~~~d~l~~~~~vPil~--Iid--~t~~~i~~~~~k~~~~~~~~rVGLLaT~~ 225 (241)
.++.++++|||.|-+-.-+.+ ....++++.+++|++- .+. .-++.+.+.|.. .| ++++..
T Consensus 36 ~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad--------~V-~lg~~~ 106 (244)
T 2y88_A 36 AALGWQRDGAEWIHLVDLDAAFGRGSNHELLAEVVGKLDVQVELSGGIRDDESLAAALATGCA--------RV-NVGTAA 106 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHTTSCCCHHHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCS--------EE-EECHHH
T ss_pred HHHHHHHcCCCEEEEEcCcccccCCChHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCC--------EE-EECchH
Confidence 445788999999998642222 4567888888999762 111 336666666664 44 677766
Q ss_pred HHhhhhHHHHHHh
Q 026201 226 ILTAGFYQEKLQH 238 (241)
Q Consensus 226 T~~s~~Y~~~L~~ 238 (241)
.-......+.++.
T Consensus 107 l~~p~~~~~~~~~ 119 (244)
T 2y88_A 107 LENPQWCARVIGE 119 (244)
T ss_dssp HHCHHHHHHHHHH
T ss_pred hhChHHHHHHHHH
Confidence 5444444444443
No 165
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=59.28 E-value=97 Score=27.53 Aligned_cols=113 Identities=16% Similarity=0.086 Sum_probs=63.7
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCE-EEecCccc--hHHhhh-cCCChhhhhcccCCCCCCCHHHHHHHH
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPF-LLCSDPLL--NKELLS-HDRSSFSSLNCKGGGVQLDDSLIVENL 154 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~-vi~S~p~i--~d~ll~-~~~~~~~~~~~~~~~~~~d~~~i~~~l 154 (241)
.|++|.++-|.=|.. -.+.-|++...++..+++ ++...++. .+.++. .+..|-..+. .......-...+...+
T Consensus 24 ~m~ki~~v~Gtr~~~--~~~a~li~~l~~~~~~~~~~~~tG~h~~~~~~~~~~~~i~~~~~l~-~~~~~~~~~~~~~~~~ 100 (396)
T 3dzc_A 24 AMKKVLIVFGTRPEA--IKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLN-IMEPGQTLNGVTSKIL 100 (396)
T ss_dssp CCEEEEEEECSHHHH--HHHHHHHHHHHHCTTEEEEEEECCSSSHHHHHHHHHTTCCCSEECC-CCCTTCCHHHHHHHHH
T ss_pred CCCeEEEEEeccHhH--HHHHHHHHHHHhCCCCcEEEEEecccHHHHHHHHHhcCCCCceeee-cCCCCCCHHHHHHHHH
Confidence 367899998877653 334555655555423445 45554443 233221 1111100010 0001112223456667
Q ss_pred HHHHHHHHHhCCcEEEEeCCchhhhH-HHHhccCCCCeeec
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSHIWH-DEVCKGCSVPFLHV 194 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH~~~-d~l~~~~~vPil~I 194 (241)
.+..+.|++...|++++-..+...+. -......++|++|+
T Consensus 101 ~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 101 LGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp HHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 77788999999999999888777665 33344578999986
No 166
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=59.19 E-value=92 Score=27.27 Aligned_cols=74 Identities=19% Similarity=0.110 Sum_probs=41.1
Q ss_pred HHHHH-hCCcEEEEeCCchhhh-HHHHhccCCCCeeec--------------------------cHHHHHHHHHhcCCCC
Q 026201 159 VFLEK-AGARCIVMPCHLSHIW-HDEVCKGCSVPFLHV--------------------------SECVAKELKEANMKPL 210 (241)
Q Consensus 159 ~~Le~-~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~I--------------------------id~t~~~i~~~~~k~~ 210 (241)
+.+.+ .++.+|+=|.++.... ...+.+..++|+|+. ....++.+++.+.+
T Consensus 78 ~li~~~~~v~aviG~~~S~~~~a~~~~~~~~~ip~is~~~~~~~l~~~~~~~~~fr~~~~~~~~~~~~~~~~~~~g~~-- 155 (433)
T 4f11_A 78 DAIKYGPNHLMVFGGVCPSVTSIIAESLQGWNLVQLSFAATTPVLADKKKYPYFFRTVPSDNAVNPAILKLLKHYQWK-- 155 (433)
T ss_dssp HHHHHSCCCSEEEECCSHHHHHHHHHTHHHHTCEEEESSCCCGGGGCTTTCTTEEESSCCGGGHHHHHHHHHHHTTCC--
T ss_pred HHHhcCCceEEEECCCcchHHHHHHHHHHhcCceEEEcccCCccccccccCCceEEecCchHHHHHHHHHHHHHcCCc--
Confidence 33444 3788888776665543 244444446666552 23455566555544
Q ss_pred CCCCCCEEEEEecHHHHhh---hhHHHHHHhcC
Q 026201 211 EAGSPLRIGVLAKNAILTA---GFYQEKLQHED 240 (241)
Q Consensus 211 ~~~~~~rVGLLaT~~T~~s---~~Y~~~L~~~G 240 (241)
+|+++..+...-. ..+++.+++.|
T Consensus 156 ------~v~ii~~~~~~g~~~~~~~~~~~~~~g 182 (433)
T 4f11_A 156 ------RVGTLTQDVQRFSEVRNDLTGVLYGED 182 (433)
T ss_dssp ------EEEEEEESSHHHHHHHHHHHHHSSSSS
T ss_pred ------EEEEEEecchhhHHHHHHHHHHHHHcC
Confidence 9999987643222 23444555544
No 167
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=58.10 E-value=12 Score=33.29 Aligned_cols=53 Identities=17% Similarity=0.283 Sum_probs=41.9
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhh-----------HHHHhccCCCCee-----eccHHHHHHHHHhcCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIW-----------HDEVCKGCSVPFL-----HVSECVAKELKEANMK 208 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~-----------~d~l~~~~~vPil-----~Iid~t~~~i~~~~~k 208 (241)
++.+|.++-|+|+++++-=|+|-. +++|++.+++|++ ++.+.-.+.+.+.|+.
T Consensus 159 ea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ai~~Gv~ 227 (286)
T 1gvf_A 159 EAKRFVELTGVDSLAVAIGTAHGLYSKTPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRRTIELGVT 227 (286)
T ss_dssp HHHHHHHHHCCSEEEECSSCCSSCCSSCCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHHHHHTTEE
T ss_pred HHHHHHHHHCCCEEEeecCccccCcCCCCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHCCCe
Confidence 344677889999999999999952 3667888899977 6777777777777765
No 168
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=57.97 E-value=65 Score=28.69 Aligned_cols=77 Identities=8% Similarity=0.059 Sum_probs=49.7
Q ss_pred HHHHHHHHHhCCcEEEEeCCc----------h--hhhHHHHhccCCCCeeeccH----HHHHHHHHhc-CCCCCCCCCCE
Q 026201 155 RRKRVFLEKAGARCIVMPCHL----------S--HIWHDEVCKGCSVPFLHVSE----CVAKELKEAN-MKPLEAGSPLR 217 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNT----------A--H~~~d~l~~~~~vPil~Iid----~t~~~i~~~~-~k~~~~~~~~r 217 (241)
.+.++.|+++|+|+|-+..-. . ..+..++++.+++|++.... ..++++.+.| .+
T Consensus 232 ~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD--------- 302 (340)
T 3gr7_A 232 VPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRAD--------- 302 (340)
T ss_dssp HHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCS---------
T ss_pred HHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCee---------
Confidence 345678999999999986421 1 12457889999999987543 3455555554 33
Q ss_pred EEEEecHHHHhhhhHHHHHHhcC
Q 026201 218 IGVLAKNAILTAGFYQEKLQHED 240 (241)
Q Consensus 218 VGLLaT~~T~~s~~Y~~~L~~~G 240 (241)
.-.+|+.....-++..+..+..|
T Consensus 303 ~V~iGR~~lanPdl~~ki~~~l~ 325 (340)
T 3gr7_A 303 LVFLGRELLRNPYWPYAAARELG 325 (340)
T ss_dssp EEEECHHHHHCTTHHHHHHHHTT
T ss_pred EEEecHHHHhCchHHHHHHHHCC
Confidence 44577777666666655554443
No 169
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=57.92 E-value=24 Score=29.45 Aligned_cols=82 Identities=15% Similarity=0.181 Sum_probs=45.4
Q ss_pred eEEEEeCCChHHHHHHHHHHHHHhccC-CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHH
Q 026201 82 TVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVF 160 (241)
Q Consensus 82 ~IGIIGGmGp~AT~~fy~kI~~~t~~d-~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~ 160 (241)
.+||| ||..|-....++..+....- -..++-+.|--.. ++.+.+ .++.
T Consensus 24 ~V~Ii--mGS~SD~~v~~~a~~~L~~~gI~~e~~V~SAHRt-------------------------p~~l~~----~~~~ 72 (181)
T 4b4k_A 24 LVGVI--MGSTSDWETMKYACDILDELNIPYEKKVVSAHRT-------------------------PDYMFE----YAET 72 (181)
T ss_dssp SEEEE--ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTS-------------------------HHHHHH----HHHH
T ss_pred cEEEE--ECCHhHHHHHHHHHHHHHHcCCCeeEEEEccccC-------------------------hHHHHH----HHHH
Confidence 59998 77777777777776666542 1223444441111 222333 3345
Q ss_pred HHHhCCcEEEE-eCCchhhhHHHHhccCCCCeeecc
Q 026201 161 LEKAGARCIVM-PCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 161 Le~~Gad~IvI-aCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
.+..|+++|+. |-..+|. ---+...+.+|+|++.
T Consensus 73 a~~~g~~ViIa~AG~aahL-pGvvAa~T~~PVIGVP 107 (181)
T 4b4k_A 73 ARERGLKVIIAGAGGAAHL-PGMVAAKTNLPVIGVP 107 (181)
T ss_dssp TTTTTCCEEEEEECSSCCH-HHHHHTTCCSCEEEEE
T ss_pred HHhcCceEEEEeccccccc-hhhHHhcCCCCEEEEe
Confidence 66778875543 3344443 3455666777877763
No 170
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=57.51 E-value=37 Score=29.07 Aligned_cols=15 Identities=27% Similarity=0.169 Sum_probs=9.0
Q ss_pred HHHHHHHhCCcEEEE
Q 026201 157 KRVFLEKAGARCIVM 171 (241)
Q Consensus 157 ~~~~Le~~Gad~IvI 171 (241)
.++.|++.|||.|-+
T Consensus 36 ~~~~l~~~GaD~iei 50 (268)
T 1qop_A 36 IIDTLIDAGADALEL 50 (268)
T ss_dssp HHHHHHHTTCSSEEE
T ss_pred HHHHHHHCCCCEEEE
Confidence 345566666666655
No 171
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=57.51 E-value=76 Score=27.57 Aligned_cols=13 Identities=8% Similarity=0.253 Sum_probs=9.0
Q ss_pred cCCeEEEEeCCChH
Q 026201 79 QANTVGIVGGASVD 92 (241)
Q Consensus 79 ~~k~IGIIGGmGp~ 92 (241)
+|++||+|| +|..
T Consensus 2 ~M~kIgfIG-lG~M 14 (300)
T 3obb_A 2 HMKQIAFIG-LGHM 14 (300)
T ss_dssp -CCEEEEEC-CSTT
T ss_pred CcCEEEEee-ehHH
Confidence 488999994 5444
No 172
>4g9p_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; oxidoreductase, isoprenoid biosynthesis, non mevalonate PATH iron-sulphur-cluster; HET: CDI MES; 1.55A {Thermus thermophilus} PDB: 2y0f_A*
Probab=57.16 E-value=16 Score=34.19 Aligned_cols=36 Identities=17% Similarity=0.245 Sum_probs=29.3
Q ss_pred HHHHHHhCCcEEEEeCCchhhh--HHHHhcc-----CCCCeee
Q 026201 158 RVFLEKAGARCIVMPCHLSHIW--HDEVCKG-----CSVPFLH 193 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH~~--~d~l~~~-----~~vPil~ 193 (241)
++.|+++|||++=++||+.-.. +.+|+++ +++|++-
T Consensus 44 I~~L~~aG~eiVRvaVp~~~~A~al~~I~~~l~~~~~~vPLVA 86 (406)
T 4g9p_A 44 VLELHRAGSEIVRLTVNDEEAAKAVPEIKRRLLAEGVEVPLVG 86 (406)
T ss_dssp HHHHHHHTCSEEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEE
T ss_pred HHHHHHcCCCEEEEecCCHHHHHhHHHHHHHHHhcCCCCceEe
Confidence 4679999999999999998765 4777665 8899853
No 173
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=56.48 E-value=72 Score=25.22 Aligned_cols=94 Identities=10% Similarity=0.072 Sum_probs=56.4
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhCCc
Q 026201 88 GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGAR 167 (241)
Q Consensus 88 GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~Le~~Gad 167 (241)
|+|..-|.+++.++-+.+-. ..|.+|+..- -..|...+ ....+.+.+.+.+.+.++.+...|+.
T Consensus 57 Gi~G~tt~~~l~r~~~~v~~-~~Pd~vvi~~-G~ND~~~~--------------~~~~~~~~~~~~l~~ii~~~~~~~~~ 120 (209)
T 4hf7_A 57 GISGQTSYQFLLRFREDVIN-LSPALVVINA-GTNDVAEN--------------TGAYNEDYTFGNIASMAELAKANKIK 120 (209)
T ss_dssp ECTTCCHHHHHHHHHHHTGG-GCCSEEEECC-CHHHHTTS--------------SSSCCHHHHHHHHHHHHHHHHHTTCE
T ss_pred ccCcccHHHHHHHHHHHHHh-cCCCEEEEEe-CCCcCccc--------------cccccHHHHHHHHHHhhHHHhccCce
Confidence 77778888888887664433 3567777651 11231100 12234566777788888888889999
Q ss_pred EEEEe---CCch----------------hhhHHHHhccCCCCeeeccHH
Q 026201 168 CIVMP---CHLS----------------HIWHDEVCKGCSVPFLHVSEC 197 (241)
Q Consensus 168 ~IvIa---CNTA----------------H~~~d~l~~~~~vPil~Iid~ 197 (241)
++++. ++.. ..++.++.+..++++|++-+.
T Consensus 121 iil~~~~P~~~~~~~~~~~~~~~~i~~~n~~i~~~a~~~~v~~iD~~~~ 169 (209)
T 4hf7_A 121 VILTSVLPAAEFPWRREIKDAPQKIQSLNARIEAYAKANKIPFVNYYQP 169 (209)
T ss_dssp EEEECCCCCSCCTTCTTCCCHHHHHHHHHHHHHHHHHHTTCCEECSHHH
T ss_pred EEEEeeeccCcccccccccchhHHHHHHHHHHHHHHHhcCCeEeecHHH
Confidence 88763 3211 112344556678888887443
No 174
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=55.58 E-value=37 Score=29.73 Aligned_cols=62 Identities=16% Similarity=0.245 Sum_probs=43.1
Q ss_pred HHHHHHHHhCCcEEEEeCCchhh-----hHHHHhccCCCCee---eccHH-HHHHHHHhcCCCCCCCCCCEEEEEecHH
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHI-----WHDEVCKGCSVPFL---HVSEC-VAKELKEANMKPLEAGSPLRIGVLAKNA 225 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~-----~~d~l~~~~~vPil---~Iid~-t~~~i~~~~~k~~~~~~~~rVGLLaT~~ 225 (241)
+.++..++.||++|=+.+-..+. .+.++++.+++|++ -|+++ -+.++++.|.. .|.|.++.-
T Consensus 83 ~~A~~y~~~GA~~IsVltd~~~f~Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD--------~VlLi~a~L 153 (272)
T 3tsm_A 83 ALAKAYEEGGAACLSVLTDTPSFQGAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWGAD--------CILIIMASV 153 (272)
T ss_dssp HHHHHHHHTTCSEEEEECCSTTTCCCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCS--------EEEEETTTS
T ss_pred HHHHHHHHCCCCEEEEeccccccCCCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcCCC--------EEEEccccc
Confidence 34467889999999877654433 45788888999985 22333 46667788876 888887643
No 175
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=55.13 E-value=27 Score=29.03 Aligned_cols=84 Identities=14% Similarity=0.035 Sum_probs=47.0
Q ss_pred CeEEEEeCCChHHHHHHHHHHHHHhccC-CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 81 NTVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 81 k~IGIIGGmGp~AT~~fy~kI~~~t~~d-~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
.++||| ||..|-....++..+....= -..++-+.|--.. .+.+. +.++
T Consensus 13 ~~V~Ii--mGS~SD~~v~~~a~~~L~~~Gi~~ev~V~SaHR~-------------------------p~~~~----~~~~ 61 (174)
T 3kuu_A 13 VKIAIV--MGSKSDWATMQFAADVLTTLNVPFHVEVVSAHRT-------------------------PDRLF----SFAE 61 (174)
T ss_dssp CCEEEE--ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTC-------------------------HHHHH----HHHH
T ss_pred CcEEEE--ECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccCC-------------------------HHHHH----HHHH
Confidence 368888 66666677777776665532 2233444441111 12222 3334
Q ss_pred HHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
..+..|+++|+....-+-..---+...+..|+|++.
T Consensus 62 ~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP 97 (174)
T 3kuu_A 62 QAEANGLHVIIAGNGGAAHLPGMLAAKTLVPVLGVP 97 (174)
T ss_dssp HTTTTTCSEEEEEEESSCCHHHHHHHTCSSCEEEEE
T ss_pred HHHhCCCcEEEEECChhhhhHHHHHhccCCCEEEee
Confidence 556788985554444333334566667788888863
No 176
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=54.21 E-value=25 Score=28.85 Aligned_cols=84 Identities=10% Similarity=0.054 Sum_probs=45.9
Q ss_pred CeEEEEeCCChHHHHHHHHHHHHHhccC-CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 81 NTVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 81 k~IGIIGGmGp~AT~~fy~kI~~~t~~d-~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
.++||| ||..|-....++..+....= -..++-+.|--.. .+. +.+.++
T Consensus 4 ~~V~Ii--mgs~SD~~v~~~a~~~l~~~gi~~ev~V~SaHR~-------------------------p~~----~~~~~~ 52 (163)
T 3ors_A 4 MKVAVI--MGSSSDWKIMQESCNMLDYFEIPYEKQVVSAHRT-------------------------PKM----MVQFAS 52 (163)
T ss_dssp CCEEEE--ESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTS-------------------------HHH----HHHHHH
T ss_pred CeEEEE--ECcHHHHHHHHHHHHHHHHcCCCEEEEEECCcCC-------------------------HHH----HHHHHH
Confidence 367887 66666667777776655432 2233444441111 122 233334
Q ss_pred HHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
..++.|+++|+....-+-..---+...+..|+|++.
T Consensus 53 ~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP 88 (163)
T 3ors_A 53 EARERGINIIIAGAGGAAHLPGMVASLTTLPVIGVP 88 (163)
T ss_dssp HTTTTTCCEEEEEEESSCCHHHHHHHHCSSCEEEEE
T ss_pred HHHhCCCcEEEEECCchhhhHHHHHhccCCCEEEee
Confidence 567788985554444333334556667788888863
No 177
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=53.87 E-value=55 Score=28.52 Aligned_cols=67 Identities=12% Similarity=0.127 Sum_probs=38.5
Q ss_pred hCCcEEEEeC--CchhhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHh-hhhHHHHHHhcC
Q 026201 164 AGARCIVMPC--HLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT-AGFYQEKLQHED 240 (241)
Q Consensus 164 ~Gad~IvIaC--NTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~-s~~Y~~~L~~~G 240 (241)
.++|+||+.- .--|+.+.+.+ ..++|+++=+|...+.+.+ +. +.|||-||.|--. +.+-...|++.|
T Consensus 65 ~~~d~vV~Spgi~~~~p~~~~a~-~~gi~v~~~~e~~~~~~~~-~~--------~~IaVTGTnGKTTTt~ll~~iL~~~g 134 (326)
T 3eag_A 65 FKADVYVIGNVAKRGMDVVEAIL-NLGLPYISGPQWLSENVLH-HH--------WVLGVAGTHGKTTTASMLAWVLEYAG 134 (326)
T ss_dssp CCCSEEEECTTCCTTCHHHHHHH-HTTCCEEEHHHHHHHHTGG-GS--------EEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCcCCCCHHHHHHH-HcCCcEEeHHHHHHHHHhc-CC--------CEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 4688888632 12244444444 3489999987766654322 12 2799999987332 233444455544
No 178
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=53.54 E-value=66 Score=26.01 Aligned_cols=75 Identities=17% Similarity=0.080 Sum_probs=44.2
Q ss_pred HHHHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCeeecc----HHHHHHHHHhcCCCCCCCCCCEEEEEe
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFLHVS----ECVAKELKEANMKPLEAGSPLRIGVLA 222 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil~Ii----d~t~~~i~~~~~k~~~~~~~~rVGLLa 222 (241)
.+.++.+++.|+|.|.+..-+.+ ....++++.+++|++-.. ...++.+.+.|.+ .| .++
T Consensus 36 ~~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad--------~V-~i~ 106 (253)
T 1h5y_A 36 VEMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGAD--------KV-SVN 106 (253)
T ss_dssp HHHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCS--------EE-EES
T ss_pred HHHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCC--------EE-EEC
Confidence 34557889999998877532221 134677888899987432 1234666677764 34 566
Q ss_pred cHHHHhhhhHHHHHHh
Q 026201 223 KNAILTAGFYQEKLQH 238 (241)
Q Consensus 223 T~~T~~s~~Y~~~L~~ 238 (241)
+...-......+..+.
T Consensus 107 ~~~~~~~~~~~~~~~~ 122 (253)
T 1h5y_A 107 TAAVRNPQLVALLARE 122 (253)
T ss_dssp HHHHHCTHHHHHHHHH
T ss_pred hHHhhCcHHHHHHHHH
Confidence 6654344444444443
No 179
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=53.51 E-value=26 Score=29.79 Aligned_cols=59 Identities=19% Similarity=0.187 Sum_probs=37.4
Q ss_pred HHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH---HHHHHHHhcCCCCCCCCCCEEEEEecHHHHh
Q 026201 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC---VAKELKEANMKPLEAGSPLRIGVLAKNAILT 228 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~---t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~ 228 (241)
.++..|+|+|+-.--|+ +.|++.+++|++.|--. ..+.+++..- .+.|||++|-+.++.
T Consensus 58 ~~~~~~~dVIISRGgta----~~Lr~~~~iPVV~I~vs~~Dil~aL~~a~~------~~~kIavVg~~~~~~ 119 (225)
T 2pju_A 58 KLANERCDAIIAAGSNG----AYLKSRLSVPVILIKPSGYDVLQFLAKAGK------LTSSIGVVTYQETIP 119 (225)
T ss_dssp HTTTSCCSEEEEEHHHH----HHHHTTCSSCEEEECCCHHHHHHHHHHTTC------TTSCEEEEEESSCCH
T ss_pred HHhcCCCeEEEeCChHH----HHHHhhCCCCEEEecCCHHHHHHHHHHHHh------hCCcEEEEeCchhhh
Confidence 34455799777665554 56778889999997332 2334444321 234899999877654
No 180
>1xmp_A PURE, phosphoribosylaminoimidazole carboxylase; purine biosynthesis, spine, lyase; 1.80A {Bacillus anthracis} SCOP: c.23.8.1
Probab=53.39 E-value=30 Score=28.57 Aligned_cols=85 Identities=12% Similarity=0.087 Sum_probs=46.8
Q ss_pred CeEEEEeCCChHHHHHHHHHHHHHhccC-CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 81 NTVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 81 k~IGIIGGmGp~AT~~fy~kI~~~t~~d-~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
..+||| ||..|-....++..+....= -..++-+.|--..| +. +.+.++
T Consensus 12 ~~V~Ii--mGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR~p-------------------------~~----l~~~~~ 60 (170)
T 1xmp_A 12 SLVGVI--MGSTSDWETMKYACDILDELNIPYEKKVVSAHRTP-------------------------DY----MFEYAE 60 (170)
T ss_dssp CSEEEE--ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTTSH-------------------------HH----HHHHHH
T ss_pred CcEEEE--ECcHHHHHHHHHHHHHHHHcCCCEEEEEEeccCCH-------------------------HH----HHHHHH
Confidence 468888 66677777778776666532 22334444411111 22 233334
Q ss_pred HHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccH
Q 026201 160 FLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid 196 (241)
..++.|+++|+....-+-..---+...+..|+|++.-
T Consensus 61 ~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~ 97 (170)
T 1xmp_A 61 TARERGLKVIIAGAGGAAHLPGMVAAKTNLPVIGVPV 97 (170)
T ss_dssp HTTTTTCCEEEEEEESSCCHHHHHHTTCCSCEEEEEE
T ss_pred HHHhCCCcEEEEECCchhhhHHHHHhccCCCEEEeeC
Confidence 5567789854433333323335566677888888743
No 181
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=53.29 E-value=12 Score=33.53 Aligned_cols=51 Identities=18% Similarity=0.378 Sum_probs=36.0
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhH-------------HHHhccCCCCee-----eccHHHHHHHHHhc
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWH-------------DEVCKGCSVPFL-----HVSECVAKELKEAN 206 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~-------------d~l~~~~~vPil-----~Iid~t~~~i~~~~ 206 (241)
++.+|.++-|+|+++++-=|+|-.| ++|++.+++|++ ++....++.+.+.|
T Consensus 157 ea~~Fv~~TgvD~LAvaiGt~HG~Yk~~g~p~L~~~~L~~I~~~~~vpLVlHGgSsv~~~~~~~~~~~g 225 (305)
T 1rvg_A 157 EARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHARLERIARLVPAPLVLHGASAVPPELVERFRASG 225 (305)
T ss_dssp HHHHHHHHHCCSEEEECSSCCSSSBCSSSSCCCCHHHHHHHHHHCCSCEEECSCCCCCHHHHHHHHHTT
T ss_pred HHHHHHHHHCCCEEEEecCccccccCCCCCCccCHHHHHHHHHhcCCCEEEeCCCCCcHHHHHHHHhhc
Confidence 3445777889999999999999533 457888899987 44444454444444
No 182
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=53.24 E-value=77 Score=24.55 Aligned_cols=52 Identities=4% Similarity=-0.020 Sum_probs=31.3
Q ss_pred CHHHHHHHHHHHHHHHHHhCCcEEEEeCCc-h--------------------hhhHHHHhccCCCCeeeccHH
Q 026201 146 DDSLIVENLRRKRVFLEKAGARCIVMPCHL-S--------------------HIWHDEVCKGCSVPFLHVSEC 197 (241)
Q Consensus 146 d~~~i~~~l~~~~~~Le~~Gad~IvIaCNT-A--------------------H~~~d~l~~~~~vPil~Iid~ 197 (241)
..++..+.+.+.++.+.+.+.+..++-|.+ . ..++.++.+..+++++++-..
T Consensus 90 ~~~~~~~~l~~ii~~l~~~~p~~~ii~~~~~P~~~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~v~~iD~~~~ 162 (200)
T 4h08_A 90 TEEEYDKSFPKLIKIIRKYAPKAKLIWANTTPVRTGEGMKEFAPITERLNVRNQIALKHINRASIEVNDLWKV 162 (200)
T ss_dssp CHHHHHHHHHHHHHHHHHHCTTCEEEEECCCCCEESGGGCEECTHHHHHHHHHHHHHHHHHHTTCEEECHHHH
T ss_pred CHHHHHHHHHHHHHHHhhhCCCccEEEeccCCCcccccccccchhHHHHHHHHHHHHHHhhhcceEEEecHHh
Confidence 345667778888888988887654332221 1 012344555678888886443
No 183
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=53.14 E-value=69 Score=26.33 Aligned_cols=73 Identities=11% Similarity=0.078 Sum_probs=44.5
Q ss_pred HHHHHHHhCCcEEEEeCCchh-------hhHHHHhccCCCCeeec--cH--HHHHHHHHhcCCCCCCCCCCEEEEEecHH
Q 026201 157 KRVFLEKAGARCIVMPCHLSH-------IWHDEVCKGCSVPFLHV--SE--CVAKELKEANMKPLEAGSPLRIGVLAKNA 225 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH-------~~~d~l~~~~~vPil~I--id--~t~~~i~~~~~k~~~~~~~~rVGLLaT~~ 225 (241)
.++.++++|+|.|-+-.-+.+ .+..++++.+++|++-- +. .-++.+.+.|.. .| ++++..
T Consensus 37 ~a~~~~~~Gad~i~v~~~d~~~~~~~~~~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad--------~V-~lg~~~ 107 (244)
T 1vzw_A 37 AALAWQRSGAEWLHLVDLDAAFGTGDNRALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCT--------RV-NLGTAA 107 (244)
T ss_dssp HHHHHHHTTCSEEEEEEHHHHHTSCCCHHHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCS--------EE-EECHHH
T ss_pred HHHHHHHcCCCEEEEecCchhhcCCChHHHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCC--------EE-EECchH
Confidence 346788999999988543222 44678888889997531 11 235666666654 44 577766
Q ss_pred HHhhhhHHHHHHh
Q 026201 226 ILTAGFYQEKLQH 238 (241)
Q Consensus 226 T~~s~~Y~~~L~~ 238 (241)
.-.-....+.++.
T Consensus 108 l~~p~~~~~~~~~ 120 (244)
T 1vzw_A 108 LETPEWVAKVIAE 120 (244)
T ss_dssp HHCHHHHHHHHHH
T ss_pred hhCHHHHHHHHHH
Confidence 5444444444443
No 184
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=52.39 E-value=77 Score=24.29 Aligned_cols=108 Identities=12% Similarity=0.041 Sum_probs=62.1
Q ss_pred EEEEe-CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHHH
Q 026201 83 VGIVG-GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFL 161 (241)
Q Consensus 83 IGIIG-GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~L 161 (241)
+-++. |.+...+.+++.++.+..... .+.+|+..-- ..|.......... .....+.+...+.+.+.++.+
T Consensus 56 ~~~~n~g~~G~~~~~~~~~~~~~~~~~-~pd~vvi~~G-~ND~~~~~~~~~~-------~~~~~~~~~~~~~l~~~i~~~ 126 (216)
T 3rjt_A 56 IRVVNVGTSGNTVADVARRWEDDVMAL-QPDYVSLMIG-VNDVWRQFDMPLV-------VERHVGIDEYRDTLRHLVATT 126 (216)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHTGGG-CCSEEEEECC-HHHHHHHHHSTTC-------GGGCCCHHHHHHHHHHHHHHH
T ss_pred eEEEECCCCCccHHHHHHHHHhHHhhc-CCCEEEEEee-ccccchhhccccc-------cccCCCHHHHHHHHHHHHHHH
Confidence 33443 777777778887776655443 5677776511 1232211100000 001335677888889899999
Q ss_pred HHhCCcEEEEe---CC--ch----------hhhHHHHhccCCCCeeeccHHHH
Q 026201 162 EKAGARCIVMP---CH--LS----------HIWHDEVCKGCSVPFLHVSECVA 199 (241)
Q Consensus 162 e~~Gad~IvIa---CN--TA----------H~~~d~l~~~~~vPil~Iid~t~ 199 (241)
.+.|+.+|++. +. .. ..++.++.+..+++++++-+...
T Consensus 127 ~~~~~~vil~~p~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~~~~vD~~~~~~ 179 (216)
T 3rjt_A 127 KPRVREMFLLSPFYLEPNRSDPMRKTVDAYIEAMRDVAASEHVPFVDVQAEFD 179 (216)
T ss_dssp GGGSSEEEEECCCCCCCCTTSHHHHHHHHHHHHHHHHHHHHTCCEECHHHHHH
T ss_pred HhcCCeEEEECCCcCCCCcchHHHHHHHHHHHHHHHHHHHcCCeEEEcHHHHH
Confidence 98899999983 11 11 11234445566899999755443
No 185
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=51.78 E-value=86 Score=28.00 Aligned_cols=31 Identities=10% Similarity=0.229 Sum_probs=19.5
Q ss_pred hhccCCeEEEEeCCChHHHHHHHHHHHHHhc
Q 026201 76 LLNQANTVGIVGGASVDSTLNLLGKLVQLSG 106 (241)
Q Consensus 76 ~~~~~k~IGIIGGmGp~AT~~fy~kI~~~t~ 106 (241)
+|...++||.|||+-......|+.-..+...
T Consensus 145 ~~tk~~kIGfVgg~~~p~v~~~~~GF~~G~k 175 (356)
T 3s99_A 145 KMSKKGIAGYIGSVPVPEVVQGINSFMLGAQ 175 (356)
T ss_dssp HHCSSCEEEEEECCCCHHHHHHHHHHHHHHH
T ss_pred HhcCCCEEEEECCCccHHHHHHHHHHHHHHH
Confidence 4555789999999844444455544444444
No 186
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=50.80 E-value=1e+02 Score=25.19 Aligned_cols=64 Identities=11% Similarity=0.191 Sum_probs=40.6
Q ss_pred HHHHHHHHHhCCcEEEEeCCchh---hhHHHHhccCCCC-----eeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHH
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSH---IWHDEVCKGCSVP-----FLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAI 226 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH---~~~d~l~~~~~vP-----il~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T 226 (241)
.+.++.|.+.|..++++.-|+.. .+.+.++ ..+++ ++.-..+++..+++... ..+|.++|+++-
T Consensus 23 ~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~-~lg~~~~~~~i~~~~~~~~~~l~~~~~-------~~~v~viG~~~l 94 (263)
T 1zjj_A 23 RELIEFLKERGIPFAFLTNNSTKTPEMYREKLL-KMGIDVSSSIIITSGLATRLYMSKHLD-------PGKIFVIGGEGL 94 (263)
T ss_dssp HHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHH-TTTCCCCGGGEEEHHHHHHHHHHHHSC-------CCCEEEESCHHH
T ss_pred HHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHH-HCCCCCChhhEEecHHHHHHHHHHhCC-------CCEEEEEcCHHH
Confidence 34556788899988877766543 2445555 34554 55555666776766421 248999999753
No 187
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=50.64 E-value=58 Score=28.69 Aligned_cols=102 Identities=12% Similarity=0.104 Sum_probs=62.0
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEec-CccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCS-DPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S-~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
+-+|||+ =+|..+|..+...+.+.-..++.+.+-+++ .+. -+++.+.+.....+
T Consensus 3 vvKiGii-KlGNigts~~idl~LDErAdRedI~vrv~gsGaK------------------------m~pe~~~~~~~~~~ 57 (283)
T 1qv9_A 3 VAKAIFI-KCGNLGTSMMMDMLLDERADREDVEFRVVGTSVK------------------------MDPECVEAAVEMAL 57 (283)
T ss_dssp CEEEEEE-ECSCCHHHHHTTGGGSTTSCCSSEEEEEEECTTC------------------------CSHHHHHHHHHHHH
T ss_pred eEEEEEE-EecccchHHHHHHHHHhhhccCCceEEEeccCCC------------------------CCHHHHHHHHHHhh
Confidence 4589999 788888888777776665544555555544 222 22333333222222
Q ss_pred HHHHHhCCcEEEEeCCchhh----hHHHHhccCCCCeeeccHHH----HHHHHHhc
Q 026201 159 VFLEKAGARCIVMPCHLSHI----WHDEVCKGCSVPFLHVSECV----AKELKEAN 206 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~----~~d~l~~~~~vPil~Iid~t----~~~i~~~~ 206 (241)
+.-+..+.||+++-+.-+-. -.+++-...++|.|=|-|.- .+++.+.|
T Consensus 58 ~~~~~~~pDfvI~isPN~a~PGP~~ARE~l~~~~iP~IvI~D~p~~K~kd~l~~~g 113 (283)
T 1qv9_A 58 DIAEDFEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPGLKVKDEMEEQG 113 (283)
T ss_dssp HHHHHHCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGGGGGHHHHHHTT
T ss_pred hhhhhcCCCEEEEECCCCCCCCchHHHHHHHhCCCCEEEEcCCcchhhHHHHHhcC
Confidence 33378899988887755443 24566666789988887754 44555554
No 188
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=50.06 E-value=72 Score=27.65 Aligned_cols=13 Identities=31% Similarity=0.452 Sum_probs=8.4
Q ss_pred CCCCEEEecCccc
Q 026201 109 NDFPFLLCSDPLL 121 (241)
Q Consensus 109 ~~~~~vi~S~p~i 121 (241)
.-++++..-+|..
T Consensus 19 ali~yi~aGdP~~ 31 (267)
T 3vnd_A 19 AFVPFVTIGDPSP 31 (267)
T ss_dssp EEEEEEETTSSCH
T ss_pred eEEEEEeCCCCCH
Confidence 4566777677754
No 189
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=49.94 E-value=33 Score=28.70 Aligned_cols=60 Identities=17% Similarity=0.107 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchh-------hhHHHHhccC--CCCeeeccH----HHHHHHHHhcCCCCCCCCCCEEEE
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSH-------IWHDEVCKGC--SVPFLHVSE----CVAKELKEANMKPLEAGSPLRIGV 220 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH-------~~~d~l~~~~--~vPil~Iid----~t~~~i~~~~~k~~~~~~~~rVGL 220 (241)
+.+.++.++++|||+| -+||-. .+...+++.+ ++||+.... ..+.++.+.|.+ +||+
T Consensus 134 ~~~~a~~a~eaGad~I--~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~t~~da~~~l~aGA~--------~iG~ 203 (225)
T 1mzh_A 134 IKKAVEICIEAGADFI--KTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIRDLETAISMIEAGAD--------RIGT 203 (225)
T ss_dssp HHHHHHHHHHHTCSEE--ECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCS--------EEEE
T ss_pred HHHHHHHHHHhCCCEE--EECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCCCHHHHHHHHHhCch--------HHHH
Confidence 4456678899999999 556521 2346666655 688876532 223333346655 7776
Q ss_pred Eec
Q 026201 221 LAK 223 (241)
Q Consensus 221 LaT 223 (241)
=..
T Consensus 204 s~~ 206 (225)
T 1mzh_A 204 SSG 206 (225)
T ss_dssp SCH
T ss_pred ccH
Confidence 544
No 190
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=49.36 E-value=24 Score=29.51 Aligned_cols=60 Identities=12% Similarity=-0.009 Sum_probs=42.8
Q ss_pred HHHHhCCcEEEEeCC-chhhhHHHHhc----cCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHh
Q 026201 160 FLEKAGARCIVMPCH-LSHIWHDEVCK----GCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228 (241)
Q Consensus 160 ~Le~~Gad~IvIaCN-TAH~~~d~l~~----~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~ 228 (241)
.|+...+|.|++.+- |++.|++.+.+ ..+++++-|.+.|++.+++.|++ +-+.+...|++
T Consensus 180 ~l~~~~~d~v~ftS~s~v~~~~~~~~~~~~~l~~~~~~aIG~~Ta~~l~~~G~~---------~~~~a~~~~~~ 244 (254)
T 4es6_A 180 RVRAERLNGLVVSSGQGLQNLYQLAAADWPEIGRLPLFVPSPRVAEMARELGAQ---------RVIDCRGASAP 244 (254)
T ss_dssp HHHHTTCCEEECCSHHHHHHHHHHHGGGHHHHTTSCEEESSHHHHHHHHHTTCS---------SEEECSSSSHH
T ss_pred HHHhCCCCEEEEcCHHHHHHHHHHhhHHHHHHhCCeEEEECHHHHHHHHHcCCC---------ceEECCCCCHH
Confidence 456678999988764 44556666654 24789999999999999998875 33556666544
No 191
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=48.78 E-value=89 Score=28.53 Aligned_cols=63 Identities=14% Similarity=0.073 Sum_probs=36.1
Q ss_pred CcEEEEeCC--chhhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHH-HHhhhhHHHHHHhcC
Q 026201 166 ARCIVMPCH--LSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNA-ILTAGFYQEKLQHED 240 (241)
Q Consensus 166 ad~IvIaCN--TAH~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~-T~~s~~Y~~~L~~~G 240 (241)
+|+||+.-- --|+.+.+.+ ..++|+++-++...+.. . .+.|||-||.| |-.+.+-...|++.|
T Consensus 73 ~d~vv~spgi~~~~p~~~~a~-~~gi~v~~~~e~~~~~~---~--------~~~IaVTGTnGKTTTt~ml~~iL~~~g 138 (451)
T 3lk7_A 73 FCYMIKNPGIPYNNPMVKKAL-EKQIPVLTEVELAYLVS---E--------SQLIGITGSNGKTTTTTMIAEVLNAGG 138 (451)
T ss_dssp EEEEEECTTSCTTSHHHHHHH-HTTCCEECHHHHHHHHC---C--------SEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred CCEEEECCcCCCCChhHHHHH-HCCCcEEeHHHHHHHhc---C--------CCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 787776421 1233333333 35899999777654422 1 13899999987 333344455555554
No 192
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=48.53 E-value=21 Score=31.65 Aligned_cols=53 Identities=13% Similarity=0.161 Sum_probs=40.5
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhh-----------HHHHhccCCCCee-----eccHHHHHHHHHhcCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIW-----------HDEVCKGCSVPFL-----HVSECVAKELKEANMK 208 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~-----------~d~l~~~~~vPil-----~Iid~t~~~i~~~~~k 208 (241)
++.+|.++-|+|+++++-=|+|-. +++|++.+++|++ ++.+.-.+.+.+.|+.
T Consensus 163 ea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i~~ai~~Gv~ 231 (288)
T 3q94_A 163 ECKHLVEATGIDCLAPALGSVHGPYKGEPNLGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKAISLGTS 231 (288)
T ss_dssp HHHHHHHHHCCSEEEECSSCBSSCCSSSCCCCHHHHHHHHHHHCSCEEECCCTTCCHHHHHHHHHTTEE
T ss_pred HHHHHHHHHCCCEEEEEcCcccCCcCCCCccCHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHHHHcCCe
Confidence 344677889999999999999953 3567777889976 5677777777777765
No 193
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=48.02 E-value=80 Score=26.85 Aligned_cols=17 Identities=12% Similarity=0.061 Sum_probs=11.8
Q ss_pred HHHHHHHHhCCcEEEEe
Q 026201 156 RKRVFLEKAGARCIVMP 172 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIa 172 (241)
+.++.|++.|||.|-+-
T Consensus 35 ~~~~~l~~~G~D~IElG 51 (262)
T 2ekc_A 35 KAFKEVLKNGTDILEIG 51 (262)
T ss_dssp HHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 34567788888877764
No 194
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=47.99 E-value=67 Score=30.62 Aligned_cols=64 Identities=14% Similarity=0.090 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhCCcEEEEeCCch-----------hhhHHHHhccCCCCee---eccH------------HHHHHHHHhcC
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLS-----------HIWHDEVCKGCSVPFL---HVSE------------CVAKELKEANM 207 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTA-----------H~~~d~l~~~~~vPil---~Iid------------~t~~~i~~~~~ 207 (241)
-.+.++.++++|||.+.+.=-++ .....++.+.+++|+. +|-+ ..++.+.+.|.
T Consensus 282 p~~~A~~~~~~Ga~~l~~~dl~~~~~~~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~aGa 361 (555)
T 1jvn_A 282 PVQLAQKYYQQGADEVTFLNITSFRDCPLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFRSGA 361 (555)
T ss_dssp HHHHHHHHHHTTCSEEEEEEEC---CCCGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCCEEEEEeCCccccccCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHHcCC
Confidence 34566788899999886652222 2235777788899998 6644 44777778877
Q ss_pred CCCCCCCCCEEEEEecHHH
Q 026201 208 KPLEAGSPLRIGVLAKNAI 226 (241)
Q Consensus 208 k~~~~~~~~rVGLLaT~~T 226 (241)
+ +| +++|...
T Consensus 362 d--------~V-~igt~~~ 371 (555)
T 1jvn_A 362 D--------KV-SIGTDAV 371 (555)
T ss_dssp S--------EE-EECHHHH
T ss_pred C--------EE-EECCHHh
Confidence 5 55 7888774
No 195
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=47.98 E-value=48 Score=28.46 Aligned_cols=37 Identities=11% Similarity=-0.089 Sum_probs=22.2
Q ss_pred HHHHHHhCCcEEEEeCCchhhhHHHHhcc-CCCCeeec
Q 026201 158 RVFLEKAGARCIVMPCHLSHIWHDEVCKG-CSVPFLHV 194 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH~~~d~l~~~-~~vPil~I 194 (241)
++.|.+.|+|.|++..........++.+. .++||+.+
T Consensus 55 l~~l~~~~~dgIi~~~~~~~~~~~~~a~~~p~~p~v~i 92 (318)
T 2fqx_A 55 LSAFADENMGLVVACGSFLVEAVIETSARFPKQKFLVI 92 (318)
T ss_dssp HHHHHHTTCSEEEEESTTTHHHHHHHHHHCTTSCEEEE
T ss_pred HHHHHHcCCCEEEECChhHHHHHHHHHHHCCCCEEEEE
Confidence 45677889999998754332224444433 35666544
No 196
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=47.96 E-value=24 Score=31.85 Aligned_cols=43 Identities=5% Similarity=-0.043 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhCCcEEEEeCCch-------hhhHHHHhccCCCCeeeccH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLS-------HIWHDEVCKGCSVPFLHVSE 196 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTA-------H~~~d~l~~~~~vPil~Iid 196 (241)
..+.++.|++.|+|+|.+..-|. ..+..++++.+++|++....
T Consensus 252 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Gg 301 (365)
T 2gou_A 252 YTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAGR 301 (365)
T ss_dssp HHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESS
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEEeCC
Confidence 44566789999999999986542 23467899999999987643
No 197
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=47.53 E-value=48 Score=27.47 Aligned_cols=84 Identities=18% Similarity=0.171 Sum_probs=45.1
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC-CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d-~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
..+|||| ||..|-....++..+....= -..++-+.|--. ..+.+. +.+
T Consensus 12 ~P~V~Ii--mGS~SD~~v~~~a~~~l~~~gi~~ev~V~saHR-------------------------~p~~l~----~~~ 60 (173)
T 4grd_A 12 APLVGVL--MGSSSDWDVMKHAVAILQEFGVPYEAKVVSAHR-------------------------MPDEMF----DYA 60 (173)
T ss_dssp SCSEEEE--ESSGGGHHHHHHHHHHHHHTTCCEEEEECCTTT-------------------------SHHHHH----HHH
T ss_pred CCeEEEE--eCcHhHHHHHHHHHHHHHHcCCCEEEEEEcccc-------------------------CHHHHH----HHH
Confidence 3478888 66666667777766555432 112333433111 112233 333
Q ss_pred HHHHHhCCcEE-EEeCCchhhhHHHHhccCCCCeeecc
Q 026201 159 VFLEKAGARCI-VMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 159 ~~Le~~Gad~I-vIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
+..+..|+++| +++--.+|. ---+...+..|+|++.
T Consensus 61 ~~a~~~g~~ViIa~AG~aahL-pgvvA~~t~~PVIgVP 97 (173)
T 4grd_A 61 EKARERGLRAIIAGAGGAAHL-PGMLAAKTTVPVLGVP 97 (173)
T ss_dssp HHHTTTTCSEEEEEEESSCCH-HHHHHHHCCSCEEEEE
T ss_pred HHHHhcCCeEEEEeccccccc-hhhheecCCCCEEEEE
Confidence 45677899854 333333332 2445566788888874
No 198
>3qi7_A Putative transcriptional regulator; periplasmic binding protein-like, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.86A {Clostridium difficile}
Probab=47.17 E-value=56 Score=29.98 Aligned_cols=74 Identities=14% Similarity=0.082 Sum_probs=45.0
Q ss_pred HHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec-----cHHHHHHHHHhcCCCCCCCCCCEEEEEecHH-----HH
Q 026201 158 RVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV-----SECVAKELKEANMKPLEAGSPLRIGVLAKNA-----IL 227 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I-----id~t~~~i~~~~~k~~~~~~~~rVGLLaT~~-----T~ 227 (241)
++.+....+|.|++..+-.+-.. .+....++ .|.+ ...+++++.+.|.| +|++++.+. +.
T Consensus 104 i~~lkekrvDgIIi~~~~~ed~~-~i~~~~di-~V~~Dn~~Ggy~A~~~Li~~Ghk--------~Ia~Isgp~~~~~~~~ 173 (371)
T 3qi7_A 104 LQKVKEKRPEIITISAPMGDDKN-QLSQFVDV-NLGVSAEERGKVLAERSKEMGAK--------AFIHYASTDDLKDVNI 173 (371)
T ss_dssp HHHHHHHCTTSEEEESSCCSCHH-HHHHHSSE-EEECCHHHHHHHHHHHHHHTTCS--------CEEEEEETTGGGSHHH
T ss_pred HHHHHhcCCCEEEEeccccccch-hhcccCce-EEEeChHHHHHHHHHHHHHCCCC--------EEEEEeccccccchhH
Confidence 35577778998777764222211 12222343 3443 23467788888877 999987532 23
Q ss_pred --hhhhHHHHHHhcCC
Q 026201 228 --TAGFYQEKLQHEDC 241 (241)
Q Consensus 228 --~s~~Y~~~L~~~G~ 241 (241)
+-.-|++.|+++|+
T Consensus 174 ~~R~~Gyk~Al~e~Gi 189 (371)
T 3qi7_A 174 AKRLEMIKETCKNIGL 189 (371)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCC
Confidence 34459999999885
No 199
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=46.97 E-value=23 Score=30.84 Aligned_cols=110 Identities=14% Similarity=0.122 Sum_probs=51.6
Q ss_pred cchhhccCCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccch--HHhhhcCCChhhhhcccCCCCCCCHHHH
Q 026201 73 SDALLNQANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLN--KELLSHDRSSFSSLNCKGGGVQLDDSLI 150 (241)
Q Consensus 73 ~~~~~~~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~--d~ll~~~~~~~~~~~~~~~~~~~d~~~i 150 (241)
.+.++..|-+|||| |.|..+...+...+.+ .+..+++-..++... +++.. -+... ..-.|++++
T Consensus 16 ~n~~~~~mirigiI-G~G~ig~~~~~~~~~~----~~~~~lvav~d~~~~~a~~~a~----~~g~~-----~~y~d~~el 81 (350)
T 4had_A 16 ENLYFQSMLRFGII-STAKIGRDNVVPAIQD----AENCVVTAIASRDLTRAREMAD----RFSVP-----HAFGSYEEM 81 (350)
T ss_dssp ------CCEEEEEE-SCCHHHHHTHHHHHHH----CSSEEEEEEECSSHHHHHHHHH----HHTCS-----EEESSHHHH
T ss_pred ccccccCccEEEEE-cChHHHHHHHHHHHHh----CCCeEEEEEECCCHHHHHHHHH----HcCCC-----eeeCCHHHH
Confidence 44455557799999 6777765544443322 124456544444321 11110 00000 011244333
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeCCch-hhh--HHHHhccC----CCCeeecc---HHHHHHHHHhc
Q 026201 151 VENLRRKRVFLEKAGARCIVMPCHLS-HIW--HDEVCKGC----SVPFLHVS---ECVAKELKEAN 206 (241)
Q Consensus 151 ~~~l~~~~~~Le~~Gad~IvIaCNTA-H~~--~d~l~~~~----~vPil~Ii---d~t~~~i~~~~ 206 (241)
|++..+|+|+|++.+. |+- ...++... .-|+-.=+ +..++.+++.+
T Consensus 82 ----------l~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~~ 137 (350)
T 4had_A 82 ----------LASDVIDAVYIPLPTSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAARDRNK 137 (350)
T ss_dssp ----------HHCSSCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHHHHHT
T ss_pred ----------hcCCCCCEEEEeCCCchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHHHHcC
Confidence 5677899999998664 432 25566543 34653222 33455555544
No 200
>4f06_A Extracellular ligand-binding receptor; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: MSE PHB; 1.30A {Rhodopseudomonas palustris} PDB: 4evs_A*
Probab=46.00 E-value=83 Score=27.10 Aligned_cols=75 Identities=11% Similarity=0.094 Sum_probs=45.1
Q ss_pred HHH-HHhCCcEEEEeCCchhhh-HHHHhccCCCCeeec------------------------cHHHHHHHHHhcCCCCCC
Q 026201 159 VFL-EKAGARCIVMPCHLSHIW-HDEVCKGCSVPFLHV------------------------SECVAKELKEANMKPLEA 212 (241)
Q Consensus 159 ~~L-e~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~I------------------------id~t~~~i~~~~~k~~~~ 212 (241)
+.| ++.||++|+=|..+.... .-.+.+..++|+|.. ....++.+++.+.+
T Consensus 65 ~~Li~~d~V~aiiG~~~S~~~~a~~~~~~~~~vp~i~~~a~~~~~~~~~~~~fr~~~~~~~~~~~~~~~~~~~g~k---- 140 (371)
T 4f06_A 65 QELIVKEKVQYLAGLYFTPNAMAVAPLLQEAKVPMVVMNAATSSITEKSPYIVRTSFTMFQNTVPAAKVAKQKGAT---- 140 (371)
T ss_dssp HHHHHTSCCSEEEECCSHHHHHHHGGGHHHHTCCEEESSCCCGGGGGGCTTEEESSCCHHHHHHHHHHHHHHTTCC----
T ss_pred HHHHhcCCCEEEEecccccchHHHHHHHHhhcCCccccccccchhcccCCcceecccchhhhhhhhhhhhhhcCce----
Confidence 344 456899998887766543 233334446666643 12345556665544
Q ss_pred CCCCEEEEEecHHHHh---hhhHHHHHHhcCC
Q 026201 213 GSPLRIGVLAKNAILT---AGFYQEKLQHEDC 241 (241)
Q Consensus 213 ~~~~rVGLLaT~~T~~---s~~Y~~~L~~~G~ 241 (241)
||+++..+...- ...+++.+++.|.
T Consensus 141 ----~vaii~~~~~~g~~~~~~~~~~~~~~g~ 168 (371)
T 4f06_A 141 ----KVAIAVSDYGPGIDAETAFKKTFEAEGG 168 (371)
T ss_dssp ----EEEEEEESSHHHHHHHHHHHHHHHHTTC
T ss_pred ----EEEEEcCCcccchhHHHHHHHHHHhcCC
Confidence 999998765433 3346777777663
No 201
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=45.76 E-value=1.1e+02 Score=24.54 Aligned_cols=75 Identities=13% Similarity=0.038 Sum_probs=42.6
Q ss_pred HHHHHHhCCcEEEEeCCch--------hhhHHHHhccCCCCeeecc---H-HHHHHHHHhcCCCCCCCCCCEEEEEecHH
Q 026201 158 RVFLEKAGARCIVMPCHLS--------HIWHDEVCKGCSVPFLHVS---E-CVAKELKEANMKPLEAGSPLRIGVLAKNA 225 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaCNTA--------H~~~d~l~~~~~vPil~Ii---d-~t~~~i~~~~~k~~~~~~~~rVGLLaT~~ 225 (241)
++.+++.|+|.|++-.-+. -..+.++++.+++|++-.. . .-+..+.+.|.. ..++|+..
T Consensus 160 ~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~~Ga~---------~v~vgsal 230 (253)
T 1h5y_A 160 AKEVEELGAGEILLTSIDRDGTGLGYDVELIRRVADSVRIPVIASGGAGRVEHFYEAAAAGAD---------AVLAASLF 230 (253)
T ss_dssp HHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCS---------EEEESHHH
T ss_pred HHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHHHcCCc---------HHHHHHHH
Confidence 4567889999987643221 1245778888899988432 2 344455555553 44566544
Q ss_pred HHhh---hhHHHHHHhcCC
Q 026201 226 ILTA---GFYQEKLQHEDC 241 (241)
Q Consensus 226 T~~s---~~Y~~~L~~~G~ 241 (241)
.-.. .-..+.++++||
T Consensus 231 ~~~~~~~~~~~~~l~~~g~ 249 (253)
T 1h5y_A 231 HFRVLSIAQVKRYLKERGV 249 (253)
T ss_dssp HTTSSCHHHHHHHHHHTTC
T ss_pred HcCCCCHHHHHHHHHHcCC
Confidence 3222 123445666664
No 202
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=45.69 E-value=1.6e+02 Score=26.19 Aligned_cols=110 Identities=10% Similarity=-0.008 Sum_probs=60.3
Q ss_pred eEEEEeCCChHHHHHHHHHHHHHhccCC-CCCEE-EecCcc--chHHhhh-cCCChhhhhcccCCCCCCCH-HHHHHHHH
Q 026201 82 TVGIVGGASVDSTLNLLGKLVQLSGEEN-DFPFL-LCSDPL--LNKELLS-HDRSSFSSLNCKGGGVQLDD-SLIVENLR 155 (241)
Q Consensus 82 ~IGIIGGmGp~AT~~fy~kI~~~t~~d~-~~~~v-i~S~p~--i~d~ll~-~~~~~~~~~~~~~~~~~~d~-~~i~~~l~ 155 (241)
+|.++-|.-|.. -.+.-|.+...++. .+++. +...++ +.+.++. .+..|-..+ ... ...... ..+...+.
T Consensus 29 kI~~v~Gtr~~~--~~~a~li~~l~~~~~~~~~~~~~tG~h~~m~~~~~~~~~i~~~~~l-~v~-~~~~~~~~~~~~~~~ 104 (403)
T 3ot5_A 29 KVMSIFGTRPEA--IKMAPLVLALEKEPETFESTVVITAQHREMLDQVLEIFDIKPDIDL-DIM-KKGQTLAEITSRVMN 104 (403)
T ss_dssp EEEEEECSHHHH--HHHHHHHHHHHTCTTTEEEEEEECC-----CHHHHHHTTCCCSEEC-CCC-C-CCCHHHHHHHHHH
T ss_pred eEEEEEecChhH--HHHHHHHHHHHhCCCCCcEEEEEecCcHHHHHHHHHhcCCCCCccc-ccC-CCCCCHHHHHHHHHH
Confidence 799998877763 33355555555542 45543 444444 3332221 111110000 000 011222 33566777
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhH-HHHhccCCCCeeecc
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWH-DEVCKGCSVPFLHVS 195 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~-d~l~~~~~vPil~Ii 195 (241)
+..+.|++...|+|++-..|.+.+. .......++|++|+.
T Consensus 105 ~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~~ 145 (403)
T 3ot5_A 105 GINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVE 145 (403)
T ss_dssp HHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEES
T ss_pred HHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEEE
Confidence 7888999999999999888777764 333445789998864
No 203
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=45.67 E-value=34 Score=30.31 Aligned_cols=44 Identities=11% Similarity=0.027 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec
Q 026201 149 LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194 (241)
Q Consensus 149 ~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I 194 (241)
....+++++++.+.+.|+-.|..+|.+ ..+++.+.+ +++-++++
T Consensus 228 f~~p~~~~i~~~i~~~g~~~i~~~~G~-~~~l~~l~~-~g~d~~~~ 271 (359)
T 2inf_A 228 YIKPVMNRIFSELAKENVPLIMFGVGA-SHLAGDWHD-LPLDVVGL 271 (359)
T ss_dssp HTHHHHHHHHHHHGGGCSCEEEECTTC-GGGHHHHHT-SSCSEEEC
T ss_pred HhHHHHHHHHHHHHHcCCcEEEEcCCc-HHHHHHHHH-hCCCEEEe
Confidence 456777888888888899999999999 667788875 67778886
No 204
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=45.64 E-value=1.2e+02 Score=25.72 Aligned_cols=69 Identities=13% Similarity=0.066 Sum_probs=42.3
Q ss_pred HHHHHHHHhCCcEEEEeC---------Cch--------------------hhhHHHHhccCCCCeeeccH----HHHHHH
Q 026201 156 RKRVFLEKAGARCIVMPC---------HLS--------------------HIWHDEVCKGCSVPFLHVSE----CVAKEL 202 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaC---------NTA--------------------H~~~d~l~~~~~vPil~Iid----~t~~~i 202 (241)
+.++.++++|||.|.+.. .|. -.+..++++.+++||+-... ..+.++
T Consensus 180 ~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~~~~ 259 (311)
T 1ep3_A 180 PIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVLEM 259 (311)
T ss_dssp HHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHH
Confidence 345678999999999832 121 12346788888999986432 233444
Q ss_pred HHhcCCCCCCCCCCEEEEEecHHHHhhhhHH
Q 026201 203 KEANMKPLEAGSPLRIGVLAKNAILTAGFYQ 233 (241)
Q Consensus 203 ~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~ 233 (241)
.+.|.+ .-.+||.....-.+++
T Consensus 260 l~~GAd---------~V~vg~~~l~~p~~~~ 281 (311)
T 1ep3_A 260 YMAGAS---------AVAVGTANFADPFVCP 281 (311)
T ss_dssp HHHTCS---------EEEECTHHHHCTTHHH
T ss_pred HHcCCC---------EEEECHHHHcCcHHHH
Confidence 455654 4467887665444443
No 205
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=45.60 E-value=42 Score=30.24 Aligned_cols=65 Identities=11% Similarity=0.153 Sum_probs=45.0
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH-------H--HHHHHHhcCCCCCCCCCCEEEEEecH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-------V--AKELKEANMKPLEAGSPLRIGVLAKN 224 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~-------t--~~~i~~~~~k~~~~~~~~rVGLLaT~ 224 (241)
+.+.++.|.+. +|+|||=.. .|...+++.+..++||||..+. . .-.+++...+ ..+.+|+++|--
T Consensus 93 l~DTarvLs~~-~D~iviR~~-~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e~~g~----l~glkva~vGD~ 166 (323)
T 3gd5_A 93 VRDTARVLGRY-VDGLAIRTF-AQTELEEYAHYAGIPVINALTDHEHPCQVVADLLTIRENFGR----LAGLKLAYVGDG 166 (323)
T ss_dssp HHHHHHHHTTT-CSEEEEECS-SHHHHHHHHHHHCSCEEEEECSSCCHHHHHHHHHHHHHHHSC----CTTCEEEEESCC
T ss_pred HHHHHHHHHHh-CCEEEEecC-ChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhCC----CCCCEEEEECCC
Confidence 45556788888 999999866 4677788888899999998762 1 1123443211 246699999864
No 206
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=45.34 E-value=34 Score=28.59 Aligned_cols=86 Identities=17% Similarity=0.165 Sum_probs=46.1
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccC-CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d-~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
-..+||| ||..|-....++..+....= -..++-+.|--. ..+.+ .+.+
T Consensus 13 ~~~V~Ii--mGS~SD~~v~~~a~~~L~~~Gi~~dv~V~SaHR-------------------------~p~~l----~~~~ 61 (183)
T 1o4v_A 13 VPRVGII--MGSDSDLPVMKQAAEILEEFGIDYEITIVSAHR-------------------------TPDRM----FEYA 61 (183)
T ss_dssp -CEEEEE--ESCGGGHHHHHHHHHHHHHTTCEEEEEECCTTT-------------------------CHHHH----HHHH
T ss_pred CCeEEEE--eccHHHHHHHHHHHHHHHHcCCCeEEEEEcccC-------------------------CHHHH----HHHH
Confidence 4578888 66666677777776655432 122333433111 11222 2333
Q ss_pred HHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccH
Q 026201 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid 196 (241)
+..++.|+++|+....-+-..---+...+..|+|++.-
T Consensus 62 ~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP~ 99 (183)
T 1o4v_A 62 KNAEERGIEVIIAGAGGAAHLPGMVASITHLPVIGVPV 99 (183)
T ss_dssp HHTTTTTCCEEEEEEESSCCHHHHHHHHCSSCEEEEEE
T ss_pred HHHHhCCCcEEEEecCcccccHHHHHhccCCCEEEeeC
Confidence 45567889854443333333335566678888888744
No 207
>3kg2_A Glutamate receptor 2; ION channel, membrane protein, cell membrane, glycoprotein, transport, membrane, postsynaptic cell membrane, editing; HET: ZK1 NAG BMA; 3.60A {Rattus norvegicus}
Probab=45.30 E-value=2.1e+02 Score=27.35 Aligned_cols=75 Identities=8% Similarity=0.012 Sum_probs=45.8
Q ss_pred HHHHHHHhCCcEEEEeCCchhhh-HHHHhccCCCCeee------------------ccHHHHHHHHHhcCCCCCCCCCCE
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIW-HDEVCKGCSVPFLH------------------VSECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~------------------Iid~t~~~i~~~~~k~~~~~~~~r 217 (241)
.+..|.+.|+.+|+=|-++.... ...+.+..++|+|+ ..++.++.++..+.+ +
T Consensus 52 ~~~~l~~~~V~aiiG~~~S~~~~a~~~i~~~~~iP~is~~~~~~~~~~~~~r~~p~~~~a~~~l~~~~gw~--------~ 123 (823)
T 3kg2_A 52 AFCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPTDGTHPFVIQMRPDLKGALLSLIEYYQWD--------K 123 (823)
T ss_dssp HHHHHHHTTCSEEEECCCTTTHHHHHHHHHHTTCEEEECSCCCSSCCSSEEECSCCCHHHHHHHHHHTTCS--------E
T ss_pred HHHHHHhcCcEEEEcCCChhHHHHHHHHhhcCCCceeecccCCCCCCceEEEeCCCHHHHHHHHHHHCCCC--------E
Confidence 44566777999988887766554 35666666777665 234455555555544 9
Q ss_pred EEEEecHHHHh---hhhHHHHHHhcC
Q 026201 218 IGVLAKNAILT---AGFYQEKLQHED 240 (241)
Q Consensus 218 VGLLaT~~T~~---s~~Y~~~L~~~G 240 (241)
|+++. +...- ...+.+.+++.|
T Consensus 124 v~ii~-d~~~g~~~~~~~~~~~~~~g 148 (823)
T 3kg2_A 124 FAYLY-DSDRGLSTLQAVLDSAAEKK 148 (823)
T ss_dssp EEEEE-CGGGCTHHHHHHHHHHHHTT
T ss_pred EEEEE-eCChhHHHHHHHHHHhhccC
Confidence 99998 43222 223455566655
No 208
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=45.01 E-value=1e+02 Score=26.67 Aligned_cols=54 Identities=19% Similarity=0.204 Sum_probs=38.1
Q ss_pred HHHHHHHHHhCCcEEEEeCCchhh-----hHHHHhccCCCCeee---ccHH-HHHHHHHhcCC
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSHI-----WHDEVCKGCSVPFLH---VSEC-VAKELKEANMK 208 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH~-----~~d~l~~~~~vPil~---Iid~-t~~~i~~~~~k 208 (241)
.+.++..++.||++|-+-+..-.. .+.++++.+++|++- |++. .++.+.+.|.+
T Consensus 75 ~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD 137 (272)
T 3qja_A 75 AKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGAD 137 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCC
Confidence 345577899999999876654422 246678889999873 3555 37788888876
No 209
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=44.98 E-value=48 Score=30.07 Aligned_cols=65 Identities=14% Similarity=0.160 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH-------H--HHHHHHhcCCCCCCCCCCEEEEEecH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-------V--AKELKEANMKPLEAGSPLRIGVLAKN 224 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~-------t--~~~i~~~~~k~~~~~~~~rVGLLaT~ 224 (241)
+.+.++-|.+. +|+|||=.. .|-..+++.+..++||||-.+. . .-.+++...+ ..+.+|+++|--
T Consensus 115 l~DTarvLs~y-~D~IviR~~-~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~E~~G~----l~glkva~vGD~ 188 (340)
T 4ep1_A 115 VSDTAKVLSHY-IDGIMIRTF-SHADVEELAKESSIPVINGLTDDHHPCQALADLMTIYEETNT----FKGIKLAYVGDG 188 (340)
T ss_dssp TTHHHHHHHHH-CSEEEEECS-CHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHHSC----CTTCEEEEESCC
T ss_pred HHHHHHHHHHh-CCEEEEecC-ChhHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhCC----CCCCEEEEECCC
Confidence 44455688888 999999865 5667788999999999998762 1 1123443211 246699999863
No 210
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=44.91 E-value=27 Score=31.55 Aligned_cols=43 Identities=12% Similarity=-0.028 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhCCcEEEEeCCch-------hhhHHHHhccCCCCeeeccH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLS-------HIWHDEVCKGCSVPFLHVSE 196 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTA-------H~~~d~l~~~~~vPil~Iid 196 (241)
..+.++.|++.|+|+|-+.+-+. ..+..++++.+++|++....
T Consensus 253 ~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~~Gg 302 (364)
T 1vyr_A 253 ALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGA 302 (364)
T ss_dssp HHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESS
T ss_pred HHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEEECC
Confidence 34567889999999999987432 13467899999999987543
No 211
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=44.21 E-value=74 Score=28.27 Aligned_cols=64 Identities=9% Similarity=0.044 Sum_probs=43.5
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH--------H--HHHHHHhcCCCCCCCCCCEEEEEec
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC--------V--AKELKEANMKPLEAGSPLRIGVLAK 223 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~--------t--~~~i~~~~~k~~~~~~~~rVGLLaT 223 (241)
+.+.++-|.+.. |+|++=... |-..+++.+..++||||..+. . .-.+++...+ ..+.+|+++|-
T Consensus 86 l~DTarvls~~~-D~iviR~~~-~~~~~~lA~~~~vPVINag~g~~~HPtQ~LaDl~Ti~e~~g~----l~glkva~vGD 159 (306)
T 4ekn_B 86 LIDTIRVISGYA-DIIVLRHPS-EGAARLASEYSQVPIINAGDGSNQHPTQTLLDLYTIMREIGR----IDGIKIAFVGD 159 (306)
T ss_dssp HHHHHHHHHHHC-SEEEEECSS-TTHHHHHHHHCSSCEEESCSSSSCCHHHHHHHHHHHHHHHSC----STTCEEEEESC
T ss_pred HHHHHHHHHHhC-cEEEEEcCC-hHHHHHHHHhCCCCEEeCCCCCCcCcHHHHHHHHHHHHHhCC----cCCCEEEEEcC
Confidence 444556788885 999998664 666788888899999998652 1 1123443211 24669999996
No 212
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=44.10 E-value=71 Score=26.00 Aligned_cols=84 Identities=12% Similarity=-0.030 Sum_probs=44.0
Q ss_pred CeEEEEeCCChHHHHHHHHHHHHHhccC-CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 81 NTVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 81 k~IGIIGGmGp~AT~~fy~kI~~~t~~d-~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
..+||| ||..|-....++..+....= -..++-+.|--. ..+.+.+++ +
T Consensus 3 ~~V~Ii--mgs~SD~~v~~~a~~~l~~~gi~~ev~V~saHR-------------------------~p~~~~~~~----~ 51 (159)
T 3rg8_A 3 PLVIIL--MGSSSDMGHAEKIASELKTFGIEYAIRIGSAHK-------------------------TAEHVVSML----K 51 (159)
T ss_dssp CEEEEE--ESSGGGHHHHHHHHHHHHHTTCEEEEEECCTTT-------------------------CHHHHHHHH----H
T ss_pred CeEEEE--ECcHHHHHHHHHHHHHHHHcCCCEEEEEEcccC-------------------------CHHHHHHHH----H
Confidence 368888 66666667777766555432 112344444111 112233333 3
Q ss_pred HHHHh-CCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 160 FLEKA-GARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 160 ~Le~~-Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
..++. |+++|+...--+-..---+...+..|+|++.
T Consensus 52 ~a~~~~~~~ViIa~AG~aa~LpgvvA~~t~~PVIgVP 88 (159)
T 3rg8_A 52 EYEALDRPKLYITIAGRSNALSGFVDGFVKGATIACP 88 (159)
T ss_dssp HHHTSCSCEEEEEECCSSCCHHHHHHHHSSSCEEECC
T ss_pred HhhhcCCCcEEEEECCchhhhHHHHHhccCCCEEEee
Confidence 44554 6886665554444444555666777777764
No 213
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=43.99 E-value=1.1e+02 Score=28.49 Aligned_cols=64 Identities=9% Similarity=0.133 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchh-------------------------hhHHHHhccC--CCCeeeccH-----HHHHH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSH-------------------------IWHDEVCKGC--SVPFLHVSE-----CVAKE 201 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH-------------------------~~~d~l~~~~--~vPil~Iid-----~t~~~ 201 (241)
+.+.++.+++.|||.|++ .||.- .+..++++.+ ++|||.... .+.+.
T Consensus 285 i~~iA~~a~~aGaDgIiv-~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~eDa~e~ 363 (415)
T 3i65_A 285 KKEIADVLLETNIDGMII-SNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEK 363 (415)
T ss_dssp HHHHHHHHHHHTCSEEEE-CCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEE-eCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHHH
Confidence 455667899999999875 56531 2457778877 799998743 34444
Q ss_pred HHHhcCCCCCCCCCCEEEEEecHHHHh
Q 026201 202 LKEANMKPLEAGSPLRIGVLAKNAILT 228 (241)
Q Consensus 202 i~~~~~k~~~~~~~~rVGLLaT~~T~~ 228 (241)
+ +.|. ..-.+||..-.+
T Consensus 364 l-~aGA---------d~VqIgra~l~~ 380 (415)
T 3i65_A 364 I-EAGA---------SVCQLYSCLVFN 380 (415)
T ss_dssp H-HHTE---------EEEEESHHHHHH
T ss_pred H-HcCC---------CEEEEcHHHHhc
Confidence 4 3554 456678876555
No 214
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=43.99 E-value=1e+02 Score=23.43 Aligned_cols=95 Identities=12% Similarity=0.045 Sum_probs=54.9
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhCCc
Q 026201 88 GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGAR 167 (241)
Q Consensus 88 GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~Le~~Gad 167 (241)
|++...+.+++.++.+..... .+.+|+..-- ..|.... ....+.+...+.+.+.++.+.+.|+.
T Consensus 53 g~~G~~~~~~~~~~~~~~~~~-~pd~vvi~~G-~ND~~~~--------------~~~~~~~~~~~~~~~~i~~~~~~~~~ 116 (204)
T 3p94_A 53 GISGQTTSEMLVRFRQDVINL-KPKAVVILAG-INDIAHN--------------NGVIALENVFGNLVSMAELAKANHIK 116 (204)
T ss_dssp ECTTCCHHHHHHHHHHHTGGG-CEEEEEEECC-HHHHTTT--------------TSCCCHHHHHHHHHHHHHHHHHTTCE
T ss_pred ccCcccHHHHHHHHHHHHHhC-CCCEEEEEee-cCccccc--------------cCCCCHHHHHHHHHHHHHHHHhCCCe
Confidence 566666667777765544433 4677776511 1222110 01134567778888888888889999
Q ss_pred EEEEe---CCch------------h---hhHHHHhccCCCCeeeccHHH
Q 026201 168 CIVMP---CHLS------------H---IWHDEVCKGCSVPFLHVSECV 198 (241)
Q Consensus 168 ~IvIa---CNTA------------H---~~~d~l~~~~~vPil~Iid~t 198 (241)
++++. ++.. . .++.++.+..+++++++-...
T Consensus 117 vil~~~~p~~~~~~~~~~~~~~~~~~~n~~l~~~a~~~~v~~iD~~~~~ 165 (204)
T 3p94_A 117 VIFCSVLPAYDFPWRPGMQPADKVIQLNKWIKEYADKNGLTYVDYHSAM 165 (204)
T ss_dssp EEEECCCCCSCBTTBTTCCCHHHHHHHHHHHHHHHHHTTCEEECHHHHH
T ss_pred EEEEeCCCCCCCCCCccccHHHHHHHHHHHHHHHHHHcCCcEEchhhhh
Confidence 88883 3211 0 123445555688888864443
No 215
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=43.85 E-value=60 Score=27.02 Aligned_cols=52 Identities=21% Similarity=0.024 Sum_probs=34.1
Q ss_pred HHHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCeeec-----cHHHHHHHHHhcCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFLHV-----SECVAKELKEANMK 208 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil~I-----id~t~~~i~~~~~k 208 (241)
+.++.+++.|||.|.+..-++. ....++++.+++|++-. .+. ++.+.+.|..
T Consensus 34 ~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~~iPvi~~ggi~~~~~-i~~~~~~Gad 98 (266)
T 2w6r_A 34 DWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEH-FLEAFLAGAD 98 (266)
T ss_dssp HHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGCCSCEEEESCCCSTHH-HHHHHHHTCS
T ss_pred HHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhcCCCEEEECCCCCHHH-HHHHHHcCCc
Confidence 3456788999999999654332 23577888889998842 233 4455566654
No 216
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=43.80 E-value=1e+02 Score=26.78 Aligned_cols=73 Identities=12% Similarity=0.050 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhCCcEEEEeCCch----------------h----------hhHHHHhccC--CCCeeeccH----HHHHH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLS----------------H----------IWHDEVCKGC--SVPFLHVSE----CVAKE 201 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTA----------------H----------~~~d~l~~~~--~vPil~Iid----~t~~~ 201 (241)
+.+.++.+++.|+|.|.+..-|. + .+..++++.+ ++||+.... ..+.+
T Consensus 227 ~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~~~da~~ 306 (336)
T 1f76_A 227 LIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGIDSVIAARE 306 (336)
T ss_dssp HHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCCSHHHHHH
T ss_pred HHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCCCHHHHHH
Confidence 34556789999999999864321 1 1235677777 899986532 22333
Q ss_pred HHHhcCCCCCCCCCCEEEEEecHHHH-hhhhHHHH
Q 026201 202 LKEANMKPLEAGSPLRIGVLAKNAIL-TAGFYQEK 235 (241)
Q Consensus 202 i~~~~~k~~~~~~~~rVGLLaT~~T~-~s~~Y~~~ 235 (241)
+.+.|.+ .--+||..-. .-.++++.
T Consensus 307 ~l~~GAd---------~V~igr~~l~~~P~~~~~i 332 (336)
T 1f76_A 307 KIAAGAS---------LVQIYSGFIFKGPPLIKEI 332 (336)
T ss_dssp HHHHTCS---------EEEESHHHHHHCHHHHHHH
T ss_pred HHHCCCC---------EEEeeHHHHhcCcHHHHHH
Confidence 4445654 3456777665 35555444
No 217
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=43.56 E-value=94 Score=25.42 Aligned_cols=33 Identities=6% Similarity=-0.011 Sum_probs=18.7
Q ss_pred cCCeEEEEeCCChHHHHHHHHHHHHHhccC---CCCCEE
Q 026201 79 QANTVGIVGGASVDSTLNLLGKLVQLSGEE---NDFPFL 114 (241)
Q Consensus 79 ~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d---~~~~~v 114 (241)
+.++||++--.. +-.|+..+.+...+. ....++
T Consensus 3 ~~~~Ig~i~~~~---~~~~~~~~~~g~~~~~~~~g~~~~ 38 (303)
T 3d02_A 3 AEKTVVNISKVD---GMPWFNRMGEGVVQAGKEFNLNAS 38 (303)
T ss_dssp -CEEEEEECSCS---SCHHHHHHHHHHHHHHHHTTEEEE
T ss_pred CceEEEEEeccC---CChHHHHHHHHHHHHHHHcCCEEE
Confidence 356899996322 235777777666542 344444
No 218
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=43.53 E-value=1.1e+02 Score=26.03 Aligned_cols=71 Identities=13% Similarity=0.134 Sum_probs=45.3
Q ss_pred HHHHHHHHhCCcEEEEeCCch----h-hhHHHHhccCCCCee---eccHH-HHHHHHHhcCCCCCCCCCCEEEEEecHHH
Q 026201 156 RKRVFLEKAGARCIVMPCHLS----H-IWHDEVCKGCSVPFL---HVSEC-VAKELKEANMKPLEAGSPLRIGVLAKNAI 226 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTA----H-~~~d~l~~~~~vPil---~Iid~-t~~~i~~~~~k~~~~~~~~rVGLLaT~~T 226 (241)
+.++..++.||++|=+.+-.- + ..+..+++.+++|++ -|++. -+..+.+.|.+ .|.|.++.-+
T Consensus 69 ~~A~~~~~~GA~~isvlt~~~~f~G~~~~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD--------~VlL~~~~l~ 140 (254)
T 1vc4_A 69 EAALAYARGGARAVSVLTEPHRFGGSLLDLKRVREAVDLPLLRKDFVVDPFMLEEARAFGAS--------AALLIVALLG 140 (254)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSSCCCHHHHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCS--------EEEEEHHHHG
T ss_pred HHHHHHHHcCCCEEEEecchhhhccCHHHHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCC--------EEEECccchH
Confidence 445677899999998854422 1 235788889999943 12333 45667778876 7877776544
Q ss_pred HhhhhHHHHHH
Q 026201 227 LTAGFYQEKLQ 237 (241)
Q Consensus 227 ~~s~~Y~~~L~ 237 (241)
...++.++
T Consensus 141 ---~~l~~l~~ 148 (254)
T 1vc4_A 141 ---ELTGAYLE 148 (254)
T ss_dssp ---GGHHHHHH
T ss_pred ---HHHHHHHH
Confidence 34554443
No 219
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=43.48 E-value=35 Score=31.39 Aligned_cols=99 Identities=9% Similarity=-0.028 Sum_probs=57.1
Q ss_pred eCCChHHHHHHHHHHHHHhccC---CCCCEEEecCccch--------HHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 87 GGASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLN--------KELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 87 GGmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~--------d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
||.-+.....+|+.|.+++.+- .|-+..+.|...-+ +...+. ..|.-+...+ ...+.+.+.
T Consensus 88 ~~l~~~~i~~ifr~Ii~~s~~~Q~~~hsk~~l~sr~~~~~~t~i~i~~~~iG~-~~~~~Iigpc---sves~e~a~---- 159 (385)
T 3nvt_A 88 GPFEDSTVQKLFKEIFKAGLELQEEDHSKALLVSRKNKKEDTIVTVKGLPIGN-GEPVFVFGPC---SVESYEQVA---- 159 (385)
T ss_dssp SSSCHHHHHHHHHHHHHHHHTTSTTCCTTSCTTBTTTCCSCCCEEETTEEETS-SSCEEEEECS---BCCCHHHHH----
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHcccccchhhhccccCCCCcEEEECCEEECC-CCeEEEEEeC---CcCCHHHHH----
Confidence 8999999999999999999752 44444444532211 111121 2232222222 223544443
Q ss_pred HHHHHHHHhCCcEEEEeCCc--------------hhhhHHHHhccCCCCeee
Q 026201 156 RKRVFLEKAGARCIVMPCHL--------------SHIWHDEVCKGCSVPFLH 193 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNT--------------AH~~~d~l~~~~~vPil~ 193 (241)
+.++.+.++|||+|.+-.-. .+.++.++.+..++|++.
T Consensus 160 ~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~t 211 (385)
T 3nvt_A 160 AVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVIS 211 (385)
T ss_dssp HHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 45567889999999887633 122344455566777664
No 220
>3p9z_A Uroporphyrinogen III cosynthase (HEMD); MCSG, PSI2, structural genomics, protein structure initiativ midwest center for structural genomics; HET: MSE; 2.10A {Helicobacter pylori}
Probab=43.45 E-value=19 Score=29.93 Aligned_cols=59 Identities=12% Similarity=0.080 Sum_probs=43.5
Q ss_pred HHHHhCCcEEEEeC-CchhhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHh
Q 026201 160 FLEKAGARCIVMPC-HLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228 (241)
Q Consensus 160 ~Le~~Gad~IvIaC-NTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~ 228 (241)
.|+....|.|++.+ +++..+++.+.-.-+++++-|.+.|++.+++.|++ | ..+...|.+
T Consensus 156 ~l~~~~~d~v~ftS~s~v~~~~~~~~~~~~~~~~aIG~~Ta~~l~~~G~~---------v-~va~~~~~e 215 (229)
T 3p9z_A 156 ALKPKEKSILIFTAISHAKAFLHYFEFLENYTAISIGNTTALYLQEQGIP---------S-YIAKKPSLE 215 (229)
T ss_dssp HHSCCTTCEEEECSHHHHHHHHHHSCCCTTCEEEESSHHHHHHHHHTTCC---------E-EECSSSSHH
T ss_pred HHhcCCCeEEEEECHHHHHHHHHHhCcccCCEEEEECHHHHHHHHHcCCC---------c-eeCCCCCHH
Confidence 45566789999976 77777777664334688999999999999998763 4 356666544
No 221
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=43.32 E-value=26 Score=29.69 Aligned_cols=60 Identities=13% Similarity=0.038 Sum_probs=42.4
Q ss_pred HHHHhCCcEEEEeC-CchhhhHHHHhcc----CCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHh
Q 026201 160 FLEKAGARCIVMPC-HLSHIWHDEVCKG----CSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228 (241)
Q Consensus 160 ~Le~~Gad~IvIaC-NTAH~~~d~l~~~----~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~ 228 (241)
.|+....|.|++.+ +++..|++.+.+. .+++++-|.+.|++.+++.|++ +-+.+...|.+
T Consensus 188 ~l~~~~~d~v~ftS~s~v~~~~~~~~~~~~~l~~~~~~aIG~~Ta~~l~~~G~~---------~~~va~~~t~~ 252 (269)
T 3re1_A 188 RVEVERLNGLVVSSGQGFEHLLQLAGDSWPDLAGLPLFVPSPRVASLAQAAGAR---------NVIDCRGASAA 252 (269)
T ss_dssp HHHHTTCCEEECSSHHHHTTTHHHHGGGHHHHTTSCEEESSHHHHHHHHHHTCS---------SEEECSSSSHH
T ss_pred HHHcCCCCEEEEcCHHHHHHHHHHhhHHHHHHhCCeEEEECHHHHHHHHHCCCC---------ceEECCCCCHH
Confidence 35667789888876 4445566666542 4789999999999999999875 33456555543
No 222
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=42.65 E-value=1.8e+02 Score=30.70 Aligned_cols=40 Identities=18% Similarity=0.169 Sum_probs=23.1
Q ss_pred HHHHHhCCcEEEEeCCchh--hhHHHHhccCCCCeeeccHHH
Q 026201 159 VFLEKAGARCIVMPCHLSH--IWHDEVCKGCSVPFLHVSECV 198 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH--~~~d~l~~~~~vPil~Iid~t 198 (241)
+..++.|+|+|+..+-... ..+.+..+..++|+++--..+
T Consensus 97 ~~a~~~~iDaI~pg~g~lsEn~~~a~~le~~Gi~~iGps~ea 138 (1236)
T 3va7_A 97 NAAKKTGAQAIIPGYGFLSENADFSDRCSQENIVFVGPSGDA 138 (1236)
T ss_dssp HHHHHTTCSEEECCSSGGGGCHHHHHHHHTTTCEESSCCHHH
T ss_pred HHHHHhCCCEEEECCccccccHHHHHHHHHCCCCeeCCCHHH
Confidence 3456789998775543222 223344456788887644333
No 223
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=42.13 E-value=1.3e+02 Score=25.28 Aligned_cols=37 Identities=11% Similarity=0.077 Sum_probs=27.1
Q ss_pred HHHHHhCCcEEEEeCCchhh--hHHHHhc-cCCCCeeecc
Q 026201 159 VFLEKAGARCIVMPCHLSHI--WHDEVCK-GCSVPFLHVS 195 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~--~~d~l~~-~~~vPil~Ii 195 (241)
+.+.+.++|+|+++||.... ++.++++ ...+|++...
T Consensus 187 ~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~~ 226 (356)
T 3ipc_A 187 SKMKEAGVSIIYWGGLHTEAGLIIRQAADQGLKAKLVSGD 226 (356)
T ss_dssp HHHHHTTCCEEEEESCHHHHHHHHHHHHHHTCCCEEEECG
T ss_pred HHHHhcCCCEEEEccCchHHHHHHHHHHHCCCCCcEEEec
Confidence 45667899999999987665 3566655 4788988753
No 224
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=42.02 E-value=56 Score=29.18 Aligned_cols=71 Identities=13% Similarity=0.094 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccC-CCCeeeccHH--------HH--HHHHHhcCCCCCCCCCCEEEEEe
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGC-SVPFLHVSEC--------VA--KELKEANMKPLEAGSPLRIGVLA 222 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~-~vPil~Iid~--------t~--~~i~~~~~k~~~~~~~~rVGLLa 222 (241)
+.+.++-|.+. +|+|++=.. .|-..+++.+.. ++||||..+. .+ -.+++...+ .++.+|+++|
T Consensus 88 l~DTarvls~~-~D~iviR~~-~~~~~~~la~~~~~vPVINag~G~~~HPtQaLaDl~Ti~e~~g~----l~gl~va~vG 161 (310)
T 3csu_A 88 LADTISVISTY-VDAIVMRHP-QEGAARLATEFSGNVPVLNAGDGSNQHPTQTLLDLFTIQETQGR----LDNLHVAMVG 161 (310)
T ss_dssp HHHHHHHHTTT-CSEEEEEES-STTHHHHHHHHCTTCCEEEEEETTSCCHHHHHHHHHHHHHHHSC----SSSCEEEEES
T ss_pred HHHHHHHHHHh-CCEEEEECC-ChhHHHHHHHhcCCCCEEcCccCCCCCchHHHHHHHHHHHHhCC----cCCcEEEEEC
Confidence 44555688888 799999865 466778888888 9999998761 11 123333211 2356999999
Q ss_pred cH---HHHhhh
Q 026201 223 KN---AILTAG 230 (241)
Q Consensus 223 T~---~T~~s~ 230 (241)
-- .+..|-
T Consensus 162 D~~~~rva~Sl 172 (310)
T 3csu_A 162 DLKYGRTVHSL 172 (310)
T ss_dssp CTTTCHHHHHH
T ss_pred CCCCCchHHHH
Confidence 73 454443
No 225
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=41.12 E-value=52 Score=29.25 Aligned_cols=45 Identities=9% Similarity=0.141 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHHH-Hh------CCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 149 LIVENLRRKRVFLE-KA------GARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 149 ~i~~~l~~~~~~Le-~~------Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
.+..+++++++.+. +. |+-.|..+|++ ..+++.+.+ +++-++++-
T Consensus 232 f~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~-~~~l~~l~~-~g~d~i~~d 283 (367)
T 1r3s_A 232 FALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG-HFALEELAQ-AGYEVVGLD 283 (367)
T ss_dssp HTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC-GGGHHHHTT-SSCSEEECC
T ss_pred HhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc-HHHHHHHHh-cCCCEEEeC
Confidence 45677788888887 66 68999999999 677788865 567788864
No 226
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=41.11 E-value=1.1e+02 Score=26.54 Aligned_cols=13 Identities=31% Similarity=0.429 Sum_probs=8.5
Q ss_pred CCCCEEEecCccc
Q 026201 109 NDFPFLLCSDPLL 121 (241)
Q Consensus 109 ~~~~~vi~S~p~i 121 (241)
--++++...+|..
T Consensus 21 ali~yi~aGdP~~ 33 (271)
T 3nav_A 21 AFVPFVTIGDPNP 33 (271)
T ss_dssp EEEEEEETTSSCH
T ss_pred eEEEEEeCCCCCH
Confidence 4566777667765
No 227
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=40.50 E-value=50 Score=28.86 Aligned_cols=44 Identities=11% Similarity=-0.038 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHHHh-CCcEEEEeCCchhhhHHHHhccCCCCeeec
Q 026201 149 LIVENLRRKRVFLEKA-GARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194 (241)
Q Consensus 149 ~i~~~l~~~~~~Le~~-Gad~IvIaCNTAH~~~d~l~~~~~vPil~I 194 (241)
.+..++++.++.+.+. |+-.|..+|++ ..+++.+.+ +++.++++
T Consensus 214 f~~p~~k~i~~~i~~~~g~~~i~~~~g~-~~~l~~l~~-~g~d~~~~ 258 (338)
T 2eja_A 214 YVYPYVNYLISELKDFSDTPVIYFFRGS-SSFIDLAVD-YRADALSV 258 (338)
T ss_dssp HTHHHHHHHHHHHHHHCCCCEEEEESSH-HHHHHHHTT-SCCSEEEC
T ss_pred HhHHHHHHHHHHHhhcCCCCEEEEcCCc-HHHHHHHHH-cCCCEEEe
Confidence 4567777888888877 89999999999 667788765 46778886
No 228
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=40.10 E-value=1.4e+02 Score=24.42 Aligned_cols=74 Identities=16% Similarity=0.134 Sum_probs=44.5
Q ss_pred HHHHHHHHhCCcEEEEeCCchh-----h---hHHHHhccCCCCeeec---c-HHHHHHHHHhcCCCCCCCCCCEEEEEec
Q 026201 156 RKRVFLEKAGARCIVMPCHLSH-----I---WHDEVCKGCSVPFLHV---S-ECVAKELKEANMKPLEAGSPLRIGVLAK 223 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH-----~---~~d~l~~~~~vPil~I---i-d~t~~~i~~~~~k~~~~~~~~rVGLLaT 223 (241)
+.++.+++.|+|.|.+---++. . ...++++.+++|++-. . ..-++.+.+.|.. .| ++++
T Consensus 35 ~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad--------~V-~lg~ 105 (252)
T 1ka9_F 35 EAARAYDEAGADELVFLDISATHEERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGAD--------KV-SVNS 105 (252)
T ss_dssp HHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCS--------EE-EECH
T ss_pred HHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCC--------EE-EECh
Confidence 3456789999998877533221 1 2477888889998852 0 2345556666664 44 6676
Q ss_pred HHHHhhhhHHHHHHh
Q 026201 224 NAILTAGFYQEKLQH 238 (241)
Q Consensus 224 ~~T~~s~~Y~~~L~~ 238 (241)
..--.....++..+.
T Consensus 106 ~~l~~p~~~~~~~~~ 120 (252)
T 1ka9_F 106 AAVRRPELIRELADH 120 (252)
T ss_dssp HHHHCTHHHHHHHHH
T ss_pred HHHhCcHHHHHHHHH
Confidence 655444445554443
No 229
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=39.74 E-value=1.6e+02 Score=26.14 Aligned_cols=28 Identities=7% Similarity=0.074 Sum_probs=19.0
Q ss_pred HHHhCCcEEEEeCCc-hhhh--HHHHhccCC
Q 026201 161 LEKAGARCIVMPCHL-SHIW--HDEVCKGCS 188 (241)
Q Consensus 161 Le~~Gad~IvIaCNT-AH~~--~d~l~~~~~ 188 (241)
|++..+|+|+|++.+ .|.- ...++....
T Consensus 92 l~~~~vD~V~I~tp~~~H~~~~~~al~aGkh 122 (412)
T 4gqa_A 92 VNDPQVDVVDITSPNHLHYTMAMAAIAAGKH 122 (412)
T ss_dssp HHCTTCCEEEECSCGGGHHHHHHHHHHTTCE
T ss_pred hcCCCCCEEEECCCcHHHHHHHHHHHHcCCC
Confidence 567789999999854 5543 266666543
No 230
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=39.72 E-value=1.2e+02 Score=26.68 Aligned_cols=75 Identities=8% Similarity=0.074 Sum_probs=48.2
Q ss_pred HHHHHHHHHHhCCcEEEEeCCch------------hhhHHHHhccCCCCeeeccH----HHHHHHHHhc-CCCCCCCCCC
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLS------------HIWHDEVCKGCSVPFLHVSE----CVAKELKEAN-MKPLEAGSPL 216 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTA------------H~~~d~l~~~~~vPil~Iid----~t~~~i~~~~-~k~~~~~~~~ 216 (241)
..+.++.|++.|+|+|-+..-|. ..+..++++.+++|++.... ..++++.+.| .
T Consensus 231 ~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~a--------- 301 (338)
T 1z41_A 231 HIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRA--------- 301 (338)
T ss_dssp HHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSC---------
T ss_pred HHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCc---------
Confidence 34556789999999999865331 12347788888999986543 3344555554 3
Q ss_pred EEEEEecHHHHhhhhHHHHHH
Q 026201 217 RIGVLAKNAILTAGFYQEKLQ 237 (241)
Q Consensus 217 rVGLLaT~~T~~s~~Y~~~L~ 237 (241)
-.-.+|+...-.-++.++..+
T Consensus 302 D~V~iGR~~i~nPdl~~ki~~ 322 (338)
T 1z41_A 302 DLIFIGRELLRDPFFARTAAK 322 (338)
T ss_dssp SEEEECHHHHHCTTHHHHHHH
T ss_pred eEEeecHHHHhCchHHHHHHc
Confidence 344678777666666655443
No 231
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=39.46 E-value=1.1e+02 Score=26.72 Aligned_cols=61 Identities=18% Similarity=0.245 Sum_probs=38.7
Q ss_pred HHHHHHHHhCCcEEEEeCCch--------hhhHHHHhccCCCCee----------eccHHHHHHHHHhcCCCCCCCCCCE
Q 026201 156 RKRVFLEKAGARCIVMPCHLS--------HIWHDEVCKGCSVPFL----------HVSECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTA--------H~~~d~l~~~~~vPil----------~Iid~t~~~i~~~~~k~~~~~~~~r 217 (241)
+.++..++.|||.+++...-. -.+|++|.+.+++||+ +|-..++..+.+. .+-
T Consensus 101 ~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~---------pnI 171 (304)
T 3l21_A 101 RLAKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASH---------PNI 171 (304)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHTS---------TTE
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcC---------CCE
Confidence 344678899999988876432 2246888888898864 3334556666532 226
Q ss_pred EEEEecHH
Q 026201 218 IGVLAKNA 225 (241)
Q Consensus 218 VGLLaT~~ 225 (241)
||+==|.+
T Consensus 172 vgiKdssg 179 (304)
T 3l21_A 172 VGVXDAKA 179 (304)
T ss_dssp EEEEECSC
T ss_pred EEEECCCC
Confidence 77765544
No 232
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=39.27 E-value=96 Score=28.04 Aligned_cols=63 Identities=11% Similarity=0.102 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchh---------------------------hhHHHHhccC--CCCeeeccH-----HHH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSH---------------------------IWHDEVCKGC--SVPFLHVSE-----CVA 199 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH---------------------------~~~d~l~~~~--~vPil~Iid-----~t~ 199 (241)
+.+.++.++++|||.|++. ||.- .+..++++.+ ++||+.... .+.
T Consensus 236 ~~~ia~~~~~aGadgi~v~-ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~~da~ 314 (367)
T 3zwt_A 236 KEDIASVVKELGIDGLIVT-NTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSGQDAL 314 (367)
T ss_dssp HHHHHHHHHHHTCCEEEEC-CCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEe-CCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCHHHHH
Confidence 3456678899999998875 4421 2357788888 899998633 333
Q ss_pred HHHHHhcCCCCCCCCCCEEEEEecHHHH
Q 026201 200 KELKEANMKPLEAGSPLRIGVLAKNAIL 227 (241)
Q Consensus 200 ~~i~~~~~k~~~~~~~~rVGLLaT~~T~ 227 (241)
+.+ +.|.+ .--+||..-.
T Consensus 315 ~~l-~~GAd---------~V~vgra~l~ 332 (367)
T 3zwt_A 315 EKI-RAGAS---------LVQLYTALTF 332 (367)
T ss_dssp HHH-HHTCS---------EEEESHHHHH
T ss_pred HHH-HcCCC---------EEEECHHHHh
Confidence 434 45654 4456776543
No 233
>3p9x_A Phosphoribosylglycinamide formyltransferase; structural genomics, PSI-biology, protein STRU initiative; 1.90A {Bacillus halodurans}
Probab=39.23 E-value=70 Score=26.87 Aligned_cols=102 Identities=11% Similarity=0.146 Sum_probs=49.6
Q ss_pred CCeEEEEe-CCChHHHHHHHHHHHHHhccC---CCCCEEEecCccch--HHhhhcCCChhhhhcccCCCCCCCHHHHHHH
Q 026201 80 ANTVGIVG-GASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLN--KELLSHDRSSFSSLNCKGGGVQLDDSLIVEN 153 (241)
Q Consensus 80 ~k~IGIIG-GmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~--d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~ 153 (241)
|++|+|+. |-|.- ++.|.+..... ..+..|+.+.|..+ .+-...+. |.-..... .-.++++-
T Consensus 2 m~riavl~Sg~Gsn-----l~ali~~~~~~~l~~eI~~Visn~~~a~v~~~A~~~gI-p~~~~~~~---~~~~r~~~--- 69 (211)
T 3p9x_A 2 MKRVAIFASGSGTN-----AEAIIQSQKAGQLPCEVALLITDKPGAKVVERVKVHEI-PVCALDPK---TYPSKEAY--- 69 (211)
T ss_dssp -CEEEEECCTTCHH-----HHHHHHHHHTTCCSSEEEEEEESCSSSHHHHHHHTTTC-CEEECCGG---GSSSHHHH---
T ss_pred CCEEEEEEeCCchH-----HHHHHHHHHcCCCCcEEEEEEECCCCcHHHHHHHHcCC-CEEEeChh---hcCchhhh---
Confidence 67899985 65532 67777776544 34566666666654 11111111 11000000 00112111
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I 194 (241)
=.+..+.|++.++|+||++... +..-+++-+..+..+|||
T Consensus 70 d~~~~~~l~~~~~Dliv~agy~-~Il~~~~l~~~~~~~iNi 109 (211)
T 3p9x_A 70 EIEVVQQLKEKQIDFVVLAGYM-RLVGPTLLGAYEGRIVNI 109 (211)
T ss_dssp HHHHHHHHHHTTCCEEEESSCC-SCCCHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHhcCCCEEEEeCch-hhcCHHHHhhccCCeEEE
Confidence 1234467889999999998642 333233333333334444
No 234
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=38.98 E-value=35 Score=31.05 Aligned_cols=43 Identities=5% Similarity=-0.096 Sum_probs=31.4
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCeeeccH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFLHVSE 196 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil~Iid 196 (241)
..+.++.|++.|+|+|-+..-+.. .+..++++.+++|++....
T Consensus 257 ~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Gg 307 (377)
T 2r14_A 257 AFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGN 307 (377)
T ss_dssp HHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEEESS
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEEECC
Confidence 445678899999999999764321 2357889999999887544
No 235
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=37.84 E-value=2e+02 Score=25.49 Aligned_cols=46 Identities=9% Similarity=0.069 Sum_probs=28.6
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeee
Q 026201 145 LDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193 (241)
Q Consensus 145 ~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~ 193 (241)
.|.+.+++.+. +..++.++|.|+-.+-........+++.+++|-.+
T Consensus 58 ~d~~~~~~~~~---~~~~~~~id~V~~~~e~~~~~~a~l~e~lglpg~~ 103 (425)
T 3vot_A 58 EDEEAAMDVVR---QTFVEFPFDGVMTLFEPALPFTAKAAEALNLPGLP 103 (425)
T ss_dssp TCHHHHHHHHH---HHHHHSCCSEEECCCGGGHHHHHHHHHHTTCSSCC
T ss_pred CCHHHHHHHHH---HhhhhcCCCEEEECCchhHHHHHHHHHHcCCCCCC
Confidence 45566665554 34457789987643334444567888888888433
No 236
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=37.75 E-value=1.9e+02 Score=25.25 Aligned_cols=101 Identities=16% Similarity=0.114 Sum_probs=53.5
Q ss_pred CCeEEEEe-CCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 80 ANTVGIVG-GASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 80 ~k~IGIIG-GmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
.++|+|++ |-|. .++.|.+..+.. -.+..|+.|+|.....-..++.-.+..+ ....+.++-- .
T Consensus 90 ~~ri~vl~Sg~g~-----~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~-----~~~~~r~~~~---~ 156 (286)
T 3n0v_A 90 RPKVVIMVSKADH-----CLNDLLYRQRIGQLGMDVVAVVSNHPDLEPLAHWHKIPYYHFA-----LDPKDKPGQE---R 156 (286)
T ss_dssp CCEEEEEESSCCH-----HHHHHHHHHHTTSSCCEEEEEEESSSTTHHHHHHTTCCEEECC-----CBTTBHHHHH---H
T ss_pred CcEEEEEEeCCCC-----CHHHHHHHHHCCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeC-----CCcCCHHHHH---H
Confidence 56799886 6663 456666655543 4567777777766432112221111100 0111222211 2
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I 194 (241)
+..+.|++.++|+||++-. .+..-+.+-+...-.+|||
T Consensus 157 ~~~~~l~~~~~Dlivla~y-~~il~~~~l~~~~~~~iNi 194 (286)
T 3n0v_A 157 KVLQVIEETGAELVILARY-MQVLSPELCRRLDGWAINI 194 (286)
T ss_dssp HHHHHHHHHTCSEEEESSC-CSCCCHHHHHHTTTSEEEE
T ss_pred HHHHHHHhcCCCEEEeccc-ccccCHHHHhhhcCCeEEe
Confidence 3346788999999999854 3333355555555556665
No 237
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=37.63 E-value=42 Score=30.11 Aligned_cols=71 Identities=7% Similarity=0.011 Sum_probs=42.5
Q ss_pred HHHHHHHHHhCCcEEEEeCCc---hhhhHHHHhccCCCC-----eeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHH
Q 026201 155 RRKRVFLEKAGARCIVMPCHL---SHIWHDEVCKGCSVP-----FLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAI 226 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNT---AH~~~d~l~~~~~vP-----il~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T 226 (241)
.+.+++|.+.|..++++.-|+ .....+.+++..++| |+.=..+++..+. ..++|-++|+++.
T Consensus 35 ~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~~~~i~ts~~~~~~~~~----------~~~~v~viG~~~l 104 (352)
T 3kc2_A 35 SDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKSLVN----------KYSRILAVGTPSV 104 (352)
T ss_dssp HHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCCGGGEECTTGGGGGGTT----------TCSEEEEESSTTH
T ss_pred HHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCChhhEeehHHHHHHHHh----------cCCEEEEECCHHH
Confidence 345578999999999887664 344567777655554 2222233333221 1349999999864
Q ss_pred HhhhhHHHHHHhcCC
Q 026201 227 LTAGFYQEKLQHEDC 241 (241)
Q Consensus 227 ~~s~~Y~~~L~~~G~ 241 (241)
.+.|++.||
T Consensus 105 ------~~~l~~~G~ 113 (352)
T 3kc2_A 105 ------RGVAEGYGF 113 (352)
T ss_dssp ------HHHHHHHTC
T ss_pred ------HHHHHhCCC
Confidence 344555553
No 238
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=37.63 E-value=97 Score=27.05 Aligned_cols=81 Identities=15% Similarity=0.149 Sum_probs=0.0
Q ss_pred EEEEe--CCChHHHHHHHHHHHHHhccC--CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 83 VGIVG--GASVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 83 IGIIG--GmGp~AT~~fy~kI~~~t~~d--~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
|-+.| |=++.=|.+=.+++++.+.+. ...|+++-- ...+-.+.++..+
T Consensus 50 l~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGv-------------------------g~~st~~ai~la~--- 101 (306)
T 1o5k_A 50 LIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGA-------------------------GTNSTEKTLKLVK--- 101 (306)
T ss_dssp EEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEEC-------------------------CCSCHHHHHHHHH---
T ss_pred EEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcC-------------------------CCccHHHHHHHHH---
Q ss_pred HHHHHhCCcEEEEeCCchhh--------hHHHHhccCCCCee
Q 026201 159 VFLEKAGARCIVMPCHLSHI--------WHDEVCKGCSVPFL 192 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~--------~~d~l~~~~~vPil 192 (241)
..++.|||.+++...-... +|++|.+.+++||+
T Consensus 102 -~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 142 (306)
T 1o5k_A 102 -QAEKLGANGVLVVTPYYNKPTQEGLYQHYKYISERTDLGIV 142 (306)
T ss_dssp -HHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEE
T ss_pred -HHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEE
No 239
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=37.17 E-value=1.4e+02 Score=25.48 Aligned_cols=64 Identities=3% Similarity=-0.105 Sum_probs=40.3
Q ss_pred HHHHHHHHHHhCCcEEEEeCCc-----h---------------------------hhhHHHHhccC--CCCeeeccH---
Q 026201 154 LRRKRVFLEKAGARCIVMPCHL-----S---------------------------HIWHDEVCKGC--SVPFLHVSE--- 196 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNT-----A---------------------------H~~~d~l~~~~--~vPil~Iid--- 196 (241)
+.+.++.++++|+|.|++..-| . -.+..++++.+ ++||+....
T Consensus 174 ~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~~ 253 (311)
T 1jub_A 174 FDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIET 253 (311)
T ss_dssp HHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCCS
T ss_pred HHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCCC
Confidence 3445678899999999886432 0 11346778888 899987643
Q ss_pred --HHHHHHHHhcCCCCCCCCCCEEEEEecHHHH
Q 026201 197 --CVAKELKEANMKPLEAGSPLRIGVLAKNAIL 227 (241)
Q Consensus 197 --~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~ 227 (241)
.+.+.+ +.|.+ .-.+||....
T Consensus 254 ~~da~~~l-~~GAd---------~V~vg~~~l~ 276 (311)
T 1jub_A 254 GQDAFEHL-LCGAT---------MLQIGTALHK 276 (311)
T ss_dssp HHHHHHHH-HHTCS---------EEEECHHHHH
T ss_pred HHHHHHHH-HcCCC---------EEEEchHHHh
Confidence 333333 45654 4457777664
No 240
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=36.93 E-value=1.1e+02 Score=26.74 Aligned_cols=36 Identities=6% Similarity=0.179 Sum_probs=25.3
Q ss_pred HHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCee
Q 026201 157 KRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFL 192 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil 192 (241)
.++..++.|||.+++...-.. .+|.+|.+.+++||+
T Consensus 99 la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 142 (301)
T 1xky_A 99 LTKKATEVGVDAVMLVAPYYNKPSQEGMYQHFKAIAESTPLPVM 142 (301)
T ss_dssp HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHTCSSCEE
T ss_pred HHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 445678999998888665321 245778888888864
No 241
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=36.92 E-value=1.9e+02 Score=25.29 Aligned_cols=101 Identities=11% Similarity=-0.007 Sum_probs=53.4
Q ss_pred CCeEEEEe-CCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHH
Q 026201 80 ANTVGIVG-GASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLR 155 (241)
Q Consensus 80 ~k~IGIIG-GmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~ 155 (241)
+++|+|+. |-|. .++.|.+..+.. -.+..|+.|+|.....-..++.-.+..+ ....+.++-- .
T Consensus 95 ~~ri~vl~Sg~g~-----~l~~ll~~~~~g~l~~~i~~Visn~~~~~~~A~~~gIp~~~~~-----~~~~~r~~~~---~ 161 (292)
T 3lou_A 95 RPKVLIMVSKLEH-----CLADLLFRWKMGELKMDIVGIVSNHPDFAPLAAQHGLPFRHFP-----ITADTKAQQE---A 161 (292)
T ss_dssp CCEEEEEECSCCH-----HHHHHHHHHHHTSSCCEEEEEEESSSTTHHHHHHTTCCEEECC-----CCSSCHHHHH---H
T ss_pred CCEEEEEEcCCCc-----CHHHHHHHHHcCCCCcEEEEEEeCcHHHHHHHHHcCCCEEEeC-----CCcCCHHHHH---H
Confidence 56899986 6663 455565555432 4577788777766432112221111110 0111222211 2
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I 194 (241)
+..+.|++.++|+||++.-. +..-+++-+..+-.+|||
T Consensus 162 ~~~~~l~~~~~Dlivla~y~-~il~~~~l~~~~~~~iNi 199 (292)
T 3lou_A 162 QWLDVFETSGAELVILARYM-QVLSPEASARLANRAINI 199 (292)
T ss_dssp HHHHHHHHHTCSEEEESSCC-SCCCHHHHHHTTTSEEEE
T ss_pred HHHHHHHHhCCCEEEecCch-hhCCHHHHhhhcCCeEEe
Confidence 33467889999999998652 333355555555555655
No 242
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=36.53 E-value=45 Score=29.79 Aligned_cols=43 Identities=16% Similarity=0.312 Sum_probs=31.0
Q ss_pred HHHHHHHHHHhCCcEEEEeCCch----------------hhhHHHHhccC-CCCeeeccH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLS----------------HIWHDEVCKGC-SVPFLHVSE 196 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTA----------------H~~~d~l~~~~-~vPil~Iid 196 (241)
+.+.++.|+++|||.|.+-+-|. -.+..++++.+ ++||+--.+
T Consensus 146 ~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGg 205 (350)
T 3b0p_A 146 LAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGG 205 (350)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESS
T ss_pred HHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECC
Confidence 34456789999999999987652 11346788888 899886544
No 243
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=36.52 E-value=1e+02 Score=26.75 Aligned_cols=37 Identities=19% Similarity=0.231 Sum_probs=25.5
Q ss_pred HHHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCee
Q 026201 156 RKRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFL 192 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil 192 (241)
+.++..++.|||.+++...-.. .+|++|.+.+++|++
T Consensus 93 ~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPii 137 (297)
T 3flu_A 93 ALSQAAEKAGADYTLSVVPYYNKPSQEGIYQHFKTIAEATSIPMI 137 (297)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 3446778999998887654321 146788888888863
No 244
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=36.33 E-value=63 Score=27.32 Aligned_cols=38 Identities=16% Similarity=0.145 Sum_probs=22.0
Q ss_pred HHHHHHHhCCcEEEEeCCchhhhHHHHhccC-CCCeeec
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIWHDEVCKGC-SVPFLHV 194 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~-~vPil~I 194 (241)
.++.|.+.|+|.|++..........++.+.. ++||+.+
T Consensus 55 ~l~~l~~~~vdgIi~~~~~~~~~~~~~~~~~p~~p~v~i 93 (296)
T 2hqb_A 55 RIKELVDGGVNLIFGHGHAFAEYFSTIHNQYPDVHFVSF 93 (296)
T ss_dssp HHHHHHHTTCCEEEECSTHHHHHHHTTTTSCTTSEEEEE
T ss_pred HHHHHHHCCCCEEEEcCHhHHHHHHHHHHHCCCCEEEEE
Confidence 3456788999999986533222233333332 5677654
No 245
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=36.16 E-value=84 Score=27.23 Aligned_cols=41 Identities=15% Similarity=0.112 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
+.+..+.+++...|+|+.-+ ....+...+.+..++|++.+.
T Consensus 107 ~~~l~~~l~~~~PDlVi~d~-~~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 107 LRATAEALDGDVPDLVLYDD-FPFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHHSSSCCSEEEEES-TTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhccCCCEEEECc-hhhhHHHHHHHHhCCCEEEEE
Confidence 44555667788999998522 334445666777899998876
No 246
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=36.01 E-value=1.2e+02 Score=26.40 Aligned_cols=61 Identities=15% Similarity=0.172 Sum_probs=37.5
Q ss_pred HHHHHHHHhCCcEEEEeCCchh----------hhHHHHhccCCCCee--ec--------cHHHHHHHHHhcCCCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLSH----------IWHDEVCKGCSVPFL--HV--------SECVAKELKEANMKPLEAGSP 215 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH----------~~~d~l~~~~~vPil--~I--------id~t~~~i~~~~~k~~~~~~~ 215 (241)
+.++..++.|||.+++.+.-.. .+|++|.+.+++||+ |+ -..++..+.+. .
T Consensus 100 ~la~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~---------p 170 (307)
T 3s5o_A 100 EMTVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQH---------P 170 (307)
T ss_dssp HHHHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTS---------T
T ss_pred HHHHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhcC---------C
Confidence 3446778999999888544321 146778888888863 43 33455555431 2
Q ss_pred CEEEEEecHH
Q 026201 216 LRIGVLAKNA 225 (241)
Q Consensus 216 ~rVGLLaT~~ 225 (241)
+-||+==|.+
T Consensus 171 nIvgiKdssg 180 (307)
T 3s5o_A 171 NIVGMXDSGG 180 (307)
T ss_dssp TEEEEEECSC
T ss_pred CEEEEEcCCC
Confidence 2677766654
No 247
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=35.70 E-value=84 Score=27.93 Aligned_cols=36 Identities=17% Similarity=0.129 Sum_probs=25.3
Q ss_pred HHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCee
Q 026201 157 KRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFL 192 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil 192 (241)
.++..++.|||.+++...-.. .+|.+|.+.+++||+
T Consensus 121 la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPii 164 (332)
T 2r8w_A 121 LAKDAEAAGADALLLAPVSYTPLTQEEAYHHFAAVAGATALPLA 164 (332)
T ss_dssp HHHHHHHHTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 445678899999888765432 145778888888854
No 248
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=35.16 E-value=1e+02 Score=26.87 Aligned_cols=36 Identities=14% Similarity=0.133 Sum_probs=25.1
Q ss_pred HHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCee
Q 026201 157 KRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFL 192 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil 192 (241)
.++..++.|||.+++...-.. .+|.+|.+.+++||+
T Consensus 103 la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPii 146 (304)
T 3cpr_A 103 LAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVPIC 146 (304)
T ss_dssp HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEE
T ss_pred HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 445678999998887655321 245778888888854
No 249
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=34.94 E-value=1.3e+02 Score=27.25 Aligned_cols=72 Identities=10% Similarity=-0.007 Sum_probs=45.8
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchh-hhHHHHhccCCCCeeeccH---HHHHHHHHhc-CCCCCCCCCCEEEEEecHHHHh
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSH-IWHDEVCKGCSVPFLHVSE---CVAKELKEAN-MKPLEAGSPLRIGVLAKNAILT 228 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH-~~~d~l~~~~~vPil~Iid---~t~~~i~~~~-~k~~~~~~~~rVGLLaT~~T~~ 228 (241)
..+.++.|++.|+|+|-+..-+.- .+..++++.+++|++.... ..++++.+.+ . -.--+|......
T Consensus 244 ~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g~a---------D~V~iGR~~lan 314 (362)
T 4ab4_A 244 FTYVARELGKRGIAFICSREREADDSIGPLIKEAFGGPYIVNERFDKASANAALASGKA---------DAVAFGVPFIAN 314 (362)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSC---------SEEEESHHHHHC
T ss_pred HHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHcCCc---------cEEEECHHhHhC
Confidence 445668899999999999876521 3578899999999886533 3344444443 2 233456555544
Q ss_pred hhhHHH
Q 026201 229 AGFYQE 234 (241)
Q Consensus 229 s~~Y~~ 234 (241)
-.+..+
T Consensus 315 Pdl~~k 320 (362)
T 4ab4_A 315 PDLPAR 320 (362)
T ss_dssp TTHHHH
T ss_pred cHHHHH
Confidence 444443
No 250
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=34.93 E-value=1.7e+02 Score=27.20 Aligned_cols=64 Identities=13% Similarity=0.105 Sum_probs=40.5
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchh-------------------------hhHHHHhccC--CCCeeeccHH----HHHHH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSH-------------------------IWHDEVCKGC--SVPFLHVSEC----VAKEL 202 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH-------------------------~~~d~l~~~~--~vPil~Iid~----t~~~i 202 (241)
+.+.++.+++.|+|.|++- ||.. .+..++++.+ ++|||..... -+.+.
T Consensus 313 ~~~iA~~~~~aGaDgI~v~-ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~DA~e~ 391 (443)
T 1tv5_A 313 KKEIADVLLETNIDGMIIS-NTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLDALEK 391 (443)
T ss_dssp HHHHHHHHHHTTCSEEEEC-CCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEE-CCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHHHHHH
Confidence 4456678999999999875 5522 2357788888 8999976431 22233
Q ss_pred HHhcCCCCCCCCCCEEEEEecHHHH
Q 026201 203 KEANMKPLEAGSPLRIGVLAKNAIL 227 (241)
Q Consensus 203 ~~~~~k~~~~~~~~rVGLLaT~~T~ 227 (241)
.+.|. ..--+||..-.
T Consensus 392 l~aGA---------d~Vqigrall~ 407 (443)
T 1tv5_A 392 IEAGA---------SVCQLYSCLVF 407 (443)
T ss_dssp HHTTE---------EEEEESHHHHH
T ss_pred HHcCC---------CEEEEcHHHHh
Confidence 34554 45556776554
No 251
>1q77_A Hypothetical protein AQ_178; structural genomics, universal stress protein, PSI, protein structure initiative; 2.70A {Aquifex aeolicus} SCOP: c.26.2.4
Probab=34.92 E-value=28 Score=25.39 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=21.8
Q ss_pred HHHHHhCCcEEEEeCCchhhhHHHHhccCCCCee
Q 026201 159 VFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL 192 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil 192 (241)
+..++.++|+|||....- ...+.+-...++|++
T Consensus 103 ~~a~~~~~dliV~G~~g~-sv~~~vl~~a~~PVl 135 (138)
T 1q77_A 103 KFVEGKGYELVVWACYPS-AYLCKVIDGLNLASL 135 (138)
T ss_dssp HHHTTSCCSEEEECSCCG-GGTHHHHHHSSSEEE
T ss_pred HHHHhcCCCEEEEeCCCC-chHHHHHHhCCCceE
Confidence 445667899999987644 445555555666665
No 252
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=34.88 E-value=50 Score=29.45 Aligned_cols=64 Identities=6% Similarity=0.027 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH-------H--HHHHHHhcCCCCCCCCCCEEEEEec
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-------V--AKELKEANMKPLEAGSPLRIGVLAK 223 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~-------t--~~~i~~~~~k~~~~~~~~rVGLLaT 223 (241)
+.+.++-|.+. +|+||+=.. .|...+++.+..++||||-... . .-.+++...+ ..+.+|+++|-
T Consensus 90 l~DTarvls~~-~D~iviR~~-~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e~~g~----l~glkva~vGD 162 (309)
T 4f2g_A 90 VEDSAQVISRM-VDIIMIRTF-EQDIIQRFAENSRVPVINGLTNEYHPCQVLADIFTYYEHRGP----IRGKTVAWVGD 162 (309)
T ss_dssp HHHHHHHHHHH-CSEEEEECS-CHHHHHHHHHTCSSCEEEEECSSCCHHHHHHHHHHHHHHHSC----CTTCEEEEESC
T ss_pred HHHHHHHHHHh-CCEEEEecC-CHHHHHHHHHhCCCCEEECCCCccCcHHHHHHHHHHHHHhCC----CCCCEEEEECC
Confidence 34455688888 999999865 4677888999999999997641 1 1123443211 24669999986
No 253
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=34.76 E-value=1.5e+02 Score=25.56 Aligned_cols=40 Identities=13% Similarity=0.081 Sum_probs=22.9
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCcEEEEeCCch-hhhH--HHHhcc
Q 026201 145 LDDSLIVENLRRKRVFLEKAGARCIVMPCHLS-HIWH--DEVCKG 186 (241)
Q Consensus 145 ~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTA-H~~~--d~l~~~ 186 (241)
.+++++++.+.+..+ ++..+|+++|++.+. |.-+ ..++..
T Consensus 54 ~~~~~ll~~~~~l~~--~~~~vD~V~I~tP~~~H~~~~~~al~aG 96 (312)
T 3o9z_A 54 TEPEAFEAYLEDLRD--RGEGVDYLSIASPNHLHYPQIRMALRLG 96 (312)
T ss_dssp SCHHHHHHHHHHHHH--TTCCCSEEEECSCGGGHHHHHHHHHHTT
T ss_pred CCHHHHHHHhhhhcc--cCCCCcEEEECCCchhhHHHHHHHHHCC
Confidence 356666554421111 467899999998664 4322 455554
No 254
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=34.52 E-value=1.2e+02 Score=27.15 Aligned_cols=47 Identities=19% Similarity=0.314 Sum_probs=31.0
Q ss_pred HHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCee--ec--------cHHHHHHHH
Q 026201 157 KRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFL--HV--------SECVAKELK 203 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil--~I--------id~t~~~i~ 203 (241)
.++..++.|||.+++...-.. .+|.+|.+.+++||+ |+ -..++..+.
T Consensus 118 la~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 118 LSQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp HHHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 445678999998888655321 145778888888864 33 335566665
No 255
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=34.41 E-value=1.2e+02 Score=26.26 Aligned_cols=37 Identities=8% Similarity=0.161 Sum_probs=25.4
Q ss_pred HHHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCee
Q 026201 156 RKRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFL 192 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil 192 (241)
+.++..++.|||.+++...-.. .+|++|.+.+++||+
T Consensus 87 ~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPii 131 (291)
T 3tak_A 87 ELTKAAKDLGADAALLVTPYYNKPTQEGLYQHYKAIAEAVELPLI 131 (291)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEE
T ss_pred HHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 3446778999998887654321 146788888888864
No 256
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=34.13 E-value=49 Score=28.64 Aligned_cols=36 Identities=17% Similarity=0.358 Sum_probs=25.6
Q ss_pred HHHHHHHhCCcEEEEeCCchhh---------hHHHHhccCCCCee
Q 026201 157 KRVFLEKAGARCIVMPCHLSHI---------WHDEVCKGCSVPFL 192 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~---------~~d~l~~~~~vPil 192 (241)
.++..++.|||.+++...-... +|++|.+.+++|++
T Consensus 82 la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPii 126 (286)
T 2r91_A 82 LAKYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSAVSIPVF 126 (286)
T ss_dssp HHHHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 4467789999988886554322 45778888888854
No 257
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=34.06 E-value=49 Score=30.06 Aligned_cols=119 Identities=10% Similarity=0.004 Sum_probs=66.1
Q ss_pred EeCCChHHHHHHHHHHHHHhccC--CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHHHHH
Q 026201 86 VGGASVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEK 163 (241)
Q Consensus 86 IGGmGp~AT~~fy~kI~~~t~~d--~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~Le~ 163 (241)
-||.+.+--.+|...|++.+++. +. ++.+=-.|. +.+.. ..+.+ .. +...+.++.|++
T Consensus 218 yGG~slenR~r~~~eiv~aVr~avg~~-~v~vRis~~----------~~~~~-------~~~~~-~~-~~~~~la~~l~~ 277 (379)
T 3aty_A 218 YAGTTIDTRCQLIYDVTKSVCDAVGSD-RVGLRISPL----------NGVHG-------MIDSN-PE-ALTKHLCKKIEP 277 (379)
T ss_dssp TCTTSHHHHHHHHHHHHHHHHHHHCGG-GEEEEECTT----------CCGGG-------CCCSC-HH-HHHHHHHHHHGG
T ss_pred CCccChhhhHHHHHHHHHHHHHhcCCC-eEEEEECcc----------ccccc-------CCCCC-CH-HHHHHHHHHHHH
Confidence 35667777788888888888764 22 333311110 00000 00111 11 223456678999
Q ss_pred hCCcEEEEeCCch------hhhHHHHhccCCCCeeeccH---HHHHHHHHhc-CCCCCCCCCCEEEEEecHHHHhhhhHH
Q 026201 164 AGARCIVMPCHLS------HIWHDEVCKGCSVPFLHVSE---CVAKELKEAN-MKPLEAGSPLRIGVLAKNAILTAGFYQ 233 (241)
Q Consensus 164 ~Gad~IvIaCNTA------H~~~d~l~~~~~vPil~Iid---~t~~~i~~~~-~k~~~~~~~~rVGLLaT~~T~~s~~Y~ 233 (241)
.|+|+|-+.+-+. .. ..++++.+++|++.... ..++++.+.+ . -.--+|......-.+..
T Consensus 278 ~Gvd~i~v~~~~~~~~~~~~~-~~~ir~~~~iPvi~~G~it~~~a~~~l~~g~a---------D~V~igR~~l~~P~l~~ 347 (379)
T 3aty_A 278 LSLAYLHYLRGDMVNQQIGDV-VAWVRGSYSGVKISNLRYDFEEADQQIREGKV---------DAVAFGAKFIANPDLVE 347 (379)
T ss_dssp GCCSEEEEECSCTTSCCCCCH-HHHHHTTCCSCEEEESSCCHHHHHHHHHTTSC---------SEEEESHHHHHCTTHHH
T ss_pred hCCCEEEEcCCCcCCCCccHH-HHHHHHHCCCcEEEECCCCHHHHHHHHHcCCC---------eEEEecHHHHhCcHHHH
Confidence 9999999987542 13 67889999999887533 2333344433 2 24446666555544444
Q ss_pred H
Q 026201 234 E 234 (241)
Q Consensus 234 ~ 234 (241)
+
T Consensus 348 k 348 (379)
T 3aty_A 348 R 348 (379)
T ss_dssp H
T ss_pred H
Confidence 3
No 258
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=33.77 E-value=1.5e+02 Score=26.78 Aligned_cols=73 Identities=10% Similarity=-0.003 Sum_probs=46.0
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchh-hhHHHHhccCCCCeeeccH---HHHHHHHHhc-CCCCCCCCCCEEEEEecHHHHh
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSH-IWHDEVCKGCSVPFLHVSE---CVAKELKEAN-MKPLEAGSPLRIGVLAKNAILT 228 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH-~~~d~l~~~~~vPil~Iid---~t~~~i~~~~-~k~~~~~~~~rVGLLaT~~T~~ 228 (241)
..+.++.|++.|+|+|-+..-+.- .+..++++.+++|++.... ..++++.+.+ . -.--+|......
T Consensus 252 ~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G~a---------D~V~iGR~~lad 322 (361)
T 3gka_A 252 FGHVARELGRRRIAFLFARESFGGDAIGQQLKAAFGGPFIVNENFTLDSAQAALDAGQA---------DAVAWGKLFIAN 322 (361)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSTTCCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSC---------SEEEESHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCc---------cEEEECHHhHhC
Confidence 345667899999999999876521 3578899999999876543 3344444443 2 233456655544
Q ss_pred hhhHHHH
Q 026201 229 AGFYQEK 235 (241)
Q Consensus 229 s~~Y~~~ 235 (241)
-.+..+.
T Consensus 323 Pdl~~k~ 329 (361)
T 3gka_A 323 PDLPRRF 329 (361)
T ss_dssp TTHHHHH
T ss_pred cHHHHHH
Confidence 4444433
No 259
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=33.68 E-value=20 Score=31.80 Aligned_cols=74 Identities=12% Similarity=0.134 Sum_probs=48.8
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHH-HhccCCCCeeeccHH--------HH--HHHHHhcCCCCCCCCCCEEEEEe
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDE-VCKGCSVPFLHVSEC--------VA--KELKEANMKPLEAGSPLRIGVLA 222 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~-l~~~~~vPil~Iid~--------t~--~~i~~~~~k~~~~~~~~rVGLLa 222 (241)
+.+.++-|.+.++|+||+=.. .|...++ +.+..++||||-.+. .+ --+++...+ .++.+|+++|
T Consensus 79 l~DTarvls~~~~D~iviR~~-~~~~~~~~la~~~~vPVINAG~g~~~HPtQaLaDl~Ti~e~~g~----l~gl~va~vG 153 (291)
T 3d6n_B 79 FFDTLKTFEGLGFDYVVFRVP-FVFFPYKEIVKSLNLRLVNAGDGTHQHPSQGLIDFFTIKEHFGE----VKDLRVLYVG 153 (291)
T ss_dssp HHHHHHHHHHTTCSEEEEEES-SCCCSCHHHHHTCSSEEEEEEETTTBCHHHHHHHHHHHHHHHSC----CTTCEEEEES
T ss_pred HHHHHHHHHHhcCCEEEEEcC-ChHHHHHHHHHhCCCCEEeCccCCCcCcHHHHHHHHHHHHHhCC----cCCcEEEEEC
Confidence 445557899999999999865 4666677 888899999994331 11 123333211 2456999999
Q ss_pred c---HHHHhhhhH
Q 026201 223 K---NAILTAGFY 232 (241)
Q Consensus 223 T---~~T~~s~~Y 232 (241)
- ..+..|-.+
T Consensus 154 Dl~~~rva~Sl~~ 166 (291)
T 3d6n_B 154 DIKHSRVFRSGAP 166 (291)
T ss_dssp CCTTCHHHHHHHH
T ss_pred CCCCCchHHHHHH
Confidence 7 555555443
No 260
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=33.67 E-value=1.9e+02 Score=25.47 Aligned_cols=102 Identities=14% Similarity=0.173 Sum_probs=52.7
Q ss_pred cCCeEEEEe-CCChHHHHHHHHHHHHHhccC---CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHH
Q 026201 79 QANTVGIVG-GASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENL 154 (241)
Q Consensus 79 ~~k~IGIIG-GmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l 154 (241)
++++|+|++ |-|. .++.|.+..+.. -.+..|+.|+|.+...-...+. |+-.+. ....+.++--
T Consensus 104 ~~~ri~vl~Sg~g~-----nl~~ll~~~~~g~l~~~I~~Visn~~~~~~~A~~~gI-p~~~~~----~~~~~r~~~~--- 170 (302)
T 3o1l_A 104 QKKRVVLMASRESH-----CLADLLHRWHSDELDCDIACVISNHQDLRSMVEWHDI-PYYHVP----VDPKDKEPAF--- 170 (302)
T ss_dssp SCCEEEEEECSCCH-----HHHHHHHHHHTTCSCSEEEEEEESSSTTHHHHHTTTC-CEEECC----CCSSCCHHHH---
T ss_pred CCcEEEEEEeCCch-----hHHHHHHHHHCCCCCcEEEEEEECcHHHHHHHHHcCC-CEEEcC----CCcCCHHHHH---
Confidence 366899986 6653 456666665543 4567778777876432222221 111110 0111221111
Q ss_pred HHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I 194 (241)
.+..+.|++.++|+||++-- .+..-+.+-+..+-.+|||
T Consensus 171 ~~~~~~l~~~~~DliVlagy-m~IL~~~~l~~~~~~~INi 209 (302)
T 3o1l_A 171 AEVSRLVGHHQADVVVLARY-MQILPPQLCREYAHQVINI 209 (302)
T ss_dssp HHHHHHHHHTTCSEEEESSC-CSCCCTTHHHHTTTCEEEE
T ss_pred HHHHHHHHHhCCCEEEHhHh-hhhcCHHHHhhhhCCeEEe
Confidence 22346788999999999854 2332244444444445555
No 261
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=33.41 E-value=28 Score=31.35 Aligned_cols=41 Identities=10% Similarity=0.155 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid 196 (241)
+.+.++-|.+. +|+||+=.. .|-..+++.+..++||||..+
T Consensus 90 l~DTarvls~~-~D~iviR~~-~~~~~~~lA~~~~vPVINag~ 130 (328)
T 3grf_A 90 VQDTAEVFSRM-VDICTARLA-TKEMMREMAQHASVPCINALD 130 (328)
T ss_dssp HHHHHHHHTTT-CSEEEEECS-SHHHHHHHHHHCSSCEEESSC
T ss_pred HHHHHHHHHhh-CCEEEEecC-ChhHHHHHHHhCCCCEEeCCC
Confidence 45556788888 999999866 567778899999999999876
No 262
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=33.30 E-value=40 Score=30.20 Aligned_cols=37 Identities=16% Similarity=0.225 Sum_probs=26.7
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhH-------------HHHhccCCCCee
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWH-------------DEVCKGCSVPFL 192 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~-------------d~l~~~~~vPil 192 (241)
++.+|.++-|+|+++++-=|+|-.| ++|++..++|++
T Consensus 159 ea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I~~~~~~PLV 208 (307)
T 3n9r_A 159 EAEQFVKESQVDYLAPAIGTSHGAFKFKGEPKLDFERLQEVKRLTNIPLV 208 (307)
T ss_dssp HHHHHHHHHCCSEEEECSSCCSSSBCCSSSCCCCHHHHHHHHHHHCSCEE
T ss_pred HHHHHHHHHCCCEEEEecCCcccccCCCCCCccCHHHHHHHHhcCCCCeE
Confidence 3445677889999999999999432 345555678866
No 263
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=33.26 E-value=45 Score=30.54 Aligned_cols=42 Identities=12% Similarity=0.097 Sum_probs=34.3
Q ss_pred HHHHHHHHHHhCCcEEEEeCC---------chhhhHHHHhccCCCCeeeccH
Q 026201 154 LRRKRVFLEKAGARCIVMPCH---------LSHIWHDEVCKGCSVPFLHVSE 196 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCN---------TAH~~~d~l~~~~~vPil~Iid 196 (241)
+.+.++.|.+. +|+|+|=+. -.|...+++.+..++||||..+
T Consensus 115 l~DTarvLs~y-~D~IviR~~~~~~~~~~~~~~~~~~~lA~~~~vPVINag~ 165 (359)
T 1zq6_A 115 IAEVARVLGRY-VDLIGVRAFPKFVDWSKDREDQVLKSFAKYSPVPVINMET 165 (359)
T ss_dssp HHHHHHHHHHH-CSEEEEECCCCSSCHHHHTTCHHHHHHHHHCSSCEEESSS
T ss_pred HHHHHHHHHHh-CcEEEEeccccccccccccchHHHHHHHHhCCCCEEeCCC
Confidence 44555688888 999999877 1577788898999999999877
No 264
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=33.00 E-value=14 Score=33.45 Aligned_cols=21 Identities=14% Similarity=0.090 Sum_probs=19.0
Q ss_pred CCeEEEEe-CCChHHHHHHHHH
Q 026201 80 ANTVGIVG-GASVDSTLNLLGK 100 (241)
Q Consensus 80 ~k~IGIIG-GmGp~AT~~fy~k 100 (241)
||+|-||| |++.++++.++.+
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~ 22 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQA 22 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHH
T ss_pred CCCEEEECCcHHHHHHHHHHHH
Confidence 78999999 9999999988766
No 265
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=32.76 E-value=45 Score=29.72 Aligned_cols=64 Identities=11% Similarity=0.135 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH-------H--HHHHHHhcCCCCCCCC-CCEEEEEec
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-------V--AKELKEANMKPLEAGS-PLRIGVLAK 223 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~-------t--~~~i~~~~~k~~~~~~-~~rVGLLaT 223 (241)
+.+.++.|.+. +|+|+|=.. .|-..+++.+..++||||-.+. . .-.+++...+ .. +.+|+++|-
T Consensus 81 l~DTarvls~~-~D~iviR~~-~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e~~g~----l~~gl~va~vGD 154 (307)
T 3tpf_A 81 VKDTARVIGAM-VDFVMMRVN-KHETLLEFARYSKAPVINALSELYHPTQVLGDLFTIKEWNKM----QNGIAKVAFIGD 154 (307)
T ss_dssp HHHHHHHHHHH-SSEEEEECS-CHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHTTCC----GGGCCEEEEESC
T ss_pred HHHHHHHHHHh-CCEEEEecC-ChHHHHHHHHhCCCCEEeCCCCCcCcHHHHHHHHHHHHHhCC----CCCCCEEEEEcC
Confidence 44455688888 999999865 4677788999999999998762 1 1124443211 23 569999996
No 266
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=32.65 E-value=2.2e+02 Score=24.08 Aligned_cols=41 Identities=15% Similarity=0.143 Sum_probs=28.1
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
+.+..+.+++.+.|+|+.-+ +...+...+.+..++|++.+.
T Consensus 91 ~~~l~~~l~~~~pD~Vi~d~-~~~~~~~~aA~~~giP~v~~~ 131 (402)
T 3ia7_A 91 LRAAEEALGDNPPDLVVYDV-FPFIAGRLLAARWDRPAVRLT 131 (402)
T ss_dssp HHHHHHHHTTCCCSEEEEES-TTHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHhccCCCEEEECc-hHHHHHHHHHHhhCCCEEEEe
Confidence 44455667778999988632 344455666677899998864
No 267
>3iz5_f 60S ribosomal protein L30 (L30E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_f
Probab=32.63 E-value=64 Score=24.34 Aligned_cols=40 Identities=10% Similarity=0.145 Sum_probs=30.8
Q ss_pred HHHHHHHHHhCCcEEEEeCCchhhhHHHH---hccCCCCeeec
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSHIWHDEV---CKGCSVPFLHV 194 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH~~~d~l---~~~~~vPil~I 194 (241)
.+..+.+++..|.++++|.|+.-....++ .+..++|+++.
T Consensus 32 ~~t~kai~~gkakLVilA~D~~~~~~~~i~~~c~~~~ipv~~~ 74 (112)
T 3iz5_f 32 KTVLKTLRSSLGKLIILANNCPPLRKSEIETYAMLAKISVHHF 74 (112)
T ss_dssp HHHHHHHHTTCCSEEEECSCCCHHHHHHHHHHHHHTTCCEECC
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 34556788888999999999986554444 56679999987
No 268
>3ks9_A Mglur1, metabotropic glutamate receptor 1; glutamate receptors, dimerization, glutamic acid BIN structural genomics, structural genomics consortium; HET: Z99 NAG; 1.90A {Homo sapiens} SCOP: c.93.1.1 PDB: 1ewk_A* 1ewt_A* 1ewv_A 1isr_A* 1iss_A* 3lmk_A*
Probab=32.60 E-value=2e+02 Score=26.21 Aligned_cols=71 Identities=11% Similarity=0.102 Sum_probs=42.3
Q ss_pred HhCCcEEEEeCCchhhh-HHHHhccCCCCeeec--------------------------cHHHHHHHHHhcCCCCCCCCC
Q 026201 163 KAGARCIVMPCHLSHIW-HDEVCKGCSVPFLHV--------------------------SECVAKELKEANMKPLEAGSP 215 (241)
Q Consensus 163 ~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~I--------------------------id~t~~~i~~~~~k~~~~~~~ 215 (241)
+.++.+|+=+..+.... ...+-+..++|.|+- ..+.++.++..+.+
T Consensus 126 ~~~v~aviG~~~S~~s~ava~i~~~~~iP~Is~~a~~~~lsd~~~~p~~frt~psd~~~~~ai~~ll~~fgw~------- 198 (496)
T 3ks9_A 126 KKPIAGVIGPGSSSVAIQVQNLLQLFDIPQIAYSATSIDLSDKTLYKYFLRVVPSDTLQARAMLDIVKRYNWT------- 198 (496)
T ss_dssp -CCEEEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTCTTEEESSCCTHHHHHHHHHHHHHTTCC-------
T ss_pred CCceEEEECCCccHHHHHHHHHHhhcceeEECCCcCCccccCccCCCceEEecCChHHHHHHHHHHHHHcCCc-------
Confidence 45666666666665543 355555667776653 22455555555444
Q ss_pred CEEEEEecHHHHh---hhhHHHHHHhcCC
Q 026201 216 LRIGVLAKNAILT---AGFYQEKLQHEDC 241 (241)
Q Consensus 216 ~rVGLLaT~~T~~---s~~Y~~~L~~~G~ 241 (241)
+||+++++...- ...+++.+++.|+
T Consensus 199 -~V~li~~dd~~G~~~~~~~~~~~~~~Gi 226 (496)
T 3ks9_A 199 -YVSAVHTEGNYGESGMDAFKELAAQEGL 226 (496)
T ss_dssp -EEEEEEESSHHHHHHHHHHHHHHHHTTC
T ss_pred -EEEEEEeccHHHHHHHHHHHHHHHHcCc
Confidence 999999865432 3446677777764
No 269
>3d8t_A Uroporphyrinogen-III synthase; heme biosynthesis, lyase; 1.60A {Thermus thermophilus} PDB: 3d8r_A 3d8s_A 3d8n_A
Probab=32.47 E-value=32 Score=29.38 Aligned_cols=50 Identities=14% Similarity=0.095 Sum_probs=36.3
Q ss_pred HHHHHhCCcEEEEeCC-chhhhHHHHhc-------cC-CCCeeeccHHHHHHHHHhcCC
Q 026201 159 VFLEKAGARCIVMPCH-LSHIWHDEVCK-------GC-SVPFLHVSECVAKELKEANMK 208 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCN-TAH~~~d~l~~-------~~-~vPil~Iid~t~~~i~~~~~k 208 (241)
+.|....+|.|++.+- |+..|++.+.+ .. +++++-|.+.|++.+++.|++
T Consensus 202 ~~l~~~~~d~v~FtS~~~v~~~~~~~~~~~~~~~~l~~~~~i~aIG~~TA~al~~~G~~ 260 (286)
T 3d8t_A 202 EAVLRGEVDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVK 260 (286)
T ss_dssp HHHHTTCCSEEEESSHHHHHHHHHHCSCHHHHHHHHTTTSEEEEESHHHHHHHHHTTCC
T ss_pred HHHHcCCCCEEEEECHHHHHHHHHHHHhccchhhHhhcCCEEEEECHHHHHHHHHcCCC
Confidence 4566677898887764 45556655432 13 678999999999999998874
No 270
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=32.40 E-value=1.8e+02 Score=23.75 Aligned_cols=15 Identities=20% Similarity=0.306 Sum_probs=8.2
Q ss_pred HHHHhccCCCCeeec
Q 026201 180 HDEVCKGCSVPFLHV 194 (241)
Q Consensus 180 ~d~l~~~~~vPil~I 194 (241)
.+++++.+++|+.=|
T Consensus 72 i~~i~~~~~~pv~~~ 86 (248)
T 1geq_A 72 VKEFRRHSSTPIVLM 86 (248)
T ss_dssp HHHHHTTCCCCEEEE
T ss_pred HHHHHhhCCCCEEEE
Confidence 355666666664444
No 271
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=32.26 E-value=1.7e+02 Score=23.67 Aligned_cols=36 Identities=17% Similarity=-0.014 Sum_probs=26.9
Q ss_pred HHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeee
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLH 193 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~ 193 (241)
.+.++.++++|++.|-+- + -.+.+.+++.+++|++.
T Consensus 39 ~~~a~~~~~~G~~~i~~~--~-~~~i~~i~~~~~~p~i~ 74 (234)
T 1yxy_A 39 PLMAKAAQEAGAVGIRAN--S-VRDIKEIQAITDLPIIG 74 (234)
T ss_dssp HHHHHHHHHHTCSEEEEE--S-HHHHHHHHTTCCSCEEE
T ss_pred HHHHHHHHHCCCcEeecC--C-HHHHHHHHHhCCCCEEe
Confidence 345567889999998763 2 24578899999999973
No 272
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=32.08 E-value=1.1e+02 Score=23.06 Aligned_cols=93 Identities=11% Similarity=-0.081 Sum_probs=52.8
Q ss_pred CHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHHHH-HHHHHh------cCCCCCCCCCCEE
Q 026201 146 DDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSECVA-KELKEA------NMKPLEAGSPLRI 218 (241)
Q Consensus 146 d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~-~~i~~~------~~k~~~~~~~~rV 218 (241)
+|+.+.+...+.++.+.+.+.|+|+-.-...-.+...+...+++|.+.++.... ...... .........+++|
T Consensus 7 s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~V 86 (153)
T 1vdm_A 7 TWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDERGEKPVITIPIHGDLKDKRV 86 (153)
T ss_dssp CHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--CCCSSCEEEECCCSCCBTCEE
T ss_pred CHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCcccccceeEeccCCcCCCCCEE
Confidence 455666666666667766688887766556666778899999998765543100 000000 0000112235677
Q ss_pred EE----EecHHHHhhhhHHHHHHhcC
Q 026201 219 GV----LAKNAILTAGFYQEKLQHED 240 (241)
Q Consensus 219 GL----LaT~~T~~s~~Y~~~L~~~G 240 (241)
.| +.|-+|+..- .+.|+++|
T Consensus 87 llVDDvitTG~Tl~~a--~~~L~~~g 110 (153)
T 1vdm_A 87 VIVDDVSDTGKTLEVV--IEEVKKLG 110 (153)
T ss_dssp EEEEEEESSCHHHHHH--HHHHHTTT
T ss_pred EEEecccCChHHHHHH--HHHHHHcC
Confidence 65 6888888743 24455444
No 273
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=32.00 E-value=99 Score=27.06 Aligned_cols=102 Identities=16% Similarity=0.087 Sum_probs=50.5
Q ss_pred cCCeEEEEe-CCChHHHHHHHHHHHHHhccC---CCCCEEEecCcc-chHHhhhcCCChhhhhcccCCCCCCCHHHHHHH
Q 026201 79 QANTVGIVG-GASVDSTLNLLGKLVQLSGEE---NDFPFLLCSDPL-LNKELLSHDRSSFSSLNCKGGGVQLDDSLIVEN 153 (241)
Q Consensus 79 ~~k~IGIIG-GmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~p~-i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~ 153 (241)
++++|+|+. |-|. .++.|.+..+.. -.+..|+.|+|. +...-...+. |+-.. .....+.++-
T Consensus 87 ~~~ri~vl~Sg~g~-----nl~~ll~~~~~g~l~~~i~~Visn~~~a~~~~A~~~gI-p~~~~----~~~~~~r~~~--- 153 (287)
T 3nrb_A 87 DRKKVVIMVSKFDH-----CLGDLLYRHRLGELDMEVVGIISNHPREALSVSLVGDI-PFHYL----PVTPATKAAQ--- 153 (287)
T ss_dssp CCCEEEEEECSCCH-----HHHHHHHHHHHTSSCCEEEEEEESSCGGGCCCCCCTTS-CEEEC----CCCGGGHHHH---
T ss_pred CCcEEEEEEeCCCc-----CHHHHHHHHHCCCCCeEEEEEEeCChHHHHHHHHHcCC-CEEEE----eccCcchhhH---
Confidence 367899886 6663 445555555432 356777777776 3211001111 11100 0001111111
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I 194 (241)
=.+..+.|++.++|+||++.. .+..-+++-+.++-.+|||
T Consensus 154 ~~~~~~~l~~~~~Dlivlagy-m~il~~~~l~~~~~~~iNi 193 (287)
T 3nrb_A 154 ESQIKNIVTQSQADLIVLARY-MQILSDDLSAFLSGRCINI 193 (287)
T ss_dssp HHHHHHHHHHHTCSEEEESSC-CSCCCHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHhCCCEEEhhhh-hhhcCHHHHhhccCCeEEE
Confidence 123346788999999999865 3333344444444445555
No 274
>3mw8_A Uroporphyrinogen-III synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, lyase; 1.65A {Shewanella amazonensis}
Probab=31.64 E-value=30 Score=28.56 Aligned_cols=60 Identities=15% Similarity=0.043 Sum_probs=40.5
Q ss_pred HHHHhCCcEEEEeCC-chhhhHHHHhcc-----CCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHh
Q 026201 160 FLEKAGARCIVMPCH-LSHIWHDEVCKG-----CSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT 228 (241)
Q Consensus 160 ~Le~~Gad~IvIaCN-TAH~~~d~l~~~-----~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~ 228 (241)
.|+..++|.|++.+- |++.+++.+.+. -+++++-|.+.|++.+++.|++ +-+.+...|.+
T Consensus 167 ~l~~~~~d~v~ftS~s~v~~~~~~~~~~~~~~l~~~~~~aiG~~ta~~l~~~G~~---------~~~va~~p~~~ 232 (240)
T 3mw8_A 167 RWQSFGIDTIVVTSGEVLENLINLVPKDSFAWLRDCHIIVPSARVETQARKKGLR---------RVTNAGAANQA 232 (240)
T ss_dssp HHHHHTCCEEECCSHHHHHHHHHHSCGGGHHHHHHSEEEESSHHHHHHHHHTTCC---------CEEECSSSSHH
T ss_pred HHHhCCCCEEEEcCHHHHHHHHHHcchHHHHHHhCCCEEEECHHHHHHHHHcCCC---------ceEeCCCCCHH
Confidence 456678999988764 334455554332 2578999999999999998874 33456555543
No 275
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=31.47 E-value=57 Score=29.51 Aligned_cols=66 Identities=8% Similarity=0.078 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH-------HH--HHHHHhc--CCCCCCCCCCEEEEEe
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-------VA--KELKEAN--MKPLEAGSPLRIGVLA 222 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~-------t~--~~i~~~~--~k~~~~~~~~rVGLLa 222 (241)
+.+.++-|.+. +|+|||=.. .|-..+++.+..++||||..+. .+ -.+++.. .+ ...+.+|+++|
T Consensus 108 l~DTarvLs~~-~D~IviR~~-~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~Ti~e~~~~G~---~l~glkva~vG 182 (339)
T 4a8t_A 108 IEDTSRVLSRL-VDILMARVE-RHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMVEHLPEGK---KLEDCKVVFVG 182 (339)
T ss_dssp HHHHHHHHHHH-CSEEEEECS-SHHHHHHHHHHCSSCEEECCCSSCCHHHHHHHHHHHHHTCCTTC---CGGGCEEEEES
T ss_pred HHHHHHHHHHh-CCEEEEecC-cHHHHHHHHHhCCCCEEECCCCCcCcHHHHHHHHHHHHHhhcCC---CCCCCEEEEEC
Confidence 44455688888 999999865 4677788999999999998652 11 1244432 10 12356999998
Q ss_pred cH
Q 026201 223 KN 224 (241)
Q Consensus 223 T~ 224 (241)
--
T Consensus 183 D~ 184 (339)
T 4a8t_A 183 DA 184 (339)
T ss_dssp SC
T ss_pred CC
Confidence 64
No 276
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=31.36 E-value=1.4e+02 Score=25.17 Aligned_cols=36 Identities=11% Similarity=0.015 Sum_probs=26.4
Q ss_pred HHHHHhCCcEEEEeCCchhh--hHHHHhc-cCCCCeeec
Q 026201 159 VFLEKAGARCIVMPCHLSHI--WHDEVCK-GCSVPFLHV 194 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~--~~d~l~~-~~~vPil~I 194 (241)
..+.+.++|+|++++|.... ++.++++ ..++|++..
T Consensus 198 ~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 236 (366)
T 3td9_A 198 SVAMSFNPDAIYITGYYPEIALISRQARQLGFTGYILAG 236 (366)
T ss_dssp HHHHHTCCSEEEECSCHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHhcCCCEEEEccchhHHHHHHHHHHHcCCCceEEee
Confidence 45667899999999987665 3566665 467898875
No 277
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=31.29 E-value=99 Score=26.74 Aligned_cols=38 Identities=11% Similarity=0.075 Sum_probs=22.7
Q ss_pred CCHHHHHHHHHHHHHHH---HHhCCcEEEEeCCch-hhhH--HHHhcc
Q 026201 145 LDDSLIVENLRRKRVFL---EKAGARCIVMPCHLS-HIWH--DEVCKG 186 (241)
Q Consensus 145 ~d~~~i~~~l~~~~~~L---e~~Gad~IvIaCNTA-H~~~--d~l~~~ 186 (241)
.+++++++.+ +.| .+..+|+++|++.+. |.-+ ..++..
T Consensus 54 ~~~~~ll~~~----~~l~~~~~~~vD~V~I~tP~~~H~~~~~~al~aG 97 (318)
T 3oa2_A 54 TEFEFFLDHA----SNLKRDSATALDYVSICSPNYLHYPHIAAGLRLG 97 (318)
T ss_dssp SSHHHHHHHH----HHHTTSTTTSCCEEEECSCGGGHHHHHHHHHHTT
T ss_pred CCHHHHHHhh----hhhhhccCCCCcEEEECCCcHHHHHHHHHHHHCC
Confidence 3556655443 233 367899999998664 4422 455554
No 278
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=31.17 E-value=1.1e+02 Score=27.88 Aligned_cols=53 Identities=15% Similarity=0.082 Sum_probs=33.8
Q ss_pred HHHHHHHHhCCcEEEEeCCch---hh--hHHHHhccC-CCCeee--ccH-HHHHHHHHhcCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLS---HI--WHDEVCKGC-SVPFLH--VSE-CVAKELKEANMK 208 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTA---H~--~~d~l~~~~-~vPil~--Iid-~t~~~i~~~~~k 208 (241)
+.++.+.++|+|+|++-++.- +. +.+.+++.+ ++|++- +.. +.++.+.+.|.+
T Consensus 103 e~~~~a~~aGvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD 164 (361)
T 3r2g_A 103 QRAEALRDAGADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGAD 164 (361)
T ss_dssp HHHHHHHHTTCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCC
Confidence 445778899999999854322 22 346777765 688765 432 335556666665
No 279
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=30.99 E-value=1.2e+02 Score=22.42 Aligned_cols=56 Identities=13% Similarity=0.095 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhc-cCCCCeeeccHHHHHHHHHhc
Q 026201 149 LIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCK-GCSVPFLHVSECVAKELKEAN 206 (241)
Q Consensus 149 ~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~-~~~vPil~Iid~t~~~i~~~~ 206 (241)
.....+.+..+.+.+.|+.+|.|.+++.-.+.+.+++ ..+.|++. |...+..+..+
T Consensus 53 ~~~~~l~~~~~~~~~~~~~vv~vs~d~~~~~~~~~~~~~~~~~~~~--d~~~~~~~~~~ 109 (163)
T 3gkn_A 53 TEGLDFNALLPEFDKAGAKILGVSRDSVKSHDNFCAKQGFAFPLVS--DGDEALCRAFD 109 (163)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHCCSSCEEE--CTTCHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCceEEE--CCcHHHHHHhC
Confidence 3445566777788889999999999976655444433 35566664 43333334443
No 280
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=30.65 E-value=2.9e+02 Score=24.54 Aligned_cols=121 Identities=12% Similarity=0.102 Sum_probs=69.0
Q ss_pred ChHHHHHHHHHHHHHhccC--CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhCCc
Q 026201 90 SVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGAR 167 (241)
Q Consensus 90 Gp~AT~~fy~kI~~~t~~d--~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~Le~~Gad 167 (241)
+.+--.+|...|++.+++. +..++.+=-.|. ++ .++....+ +...+.++.|++.|+|
T Consensus 203 slenR~r~~~eiv~aVr~avg~d~pV~vRis~~-------------~~-------~~~G~~~~-~~~~~la~~L~~~Gvd 261 (363)
T 3l5l_A 203 SFDNRSRFLLETLAAVREVWPENLPLTARFGVL-------------EY-------DGRDEQTL-EESIELARRFKAGGLD 261 (363)
T ss_dssp SHHHHHHHHHHHHHHHHTTSCTTSCEEEEEEEE-------------CS-------SSCHHHHH-HHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHcCCCceEEEEecch-------------hc-------CCCCCCCH-HHHHHHHHHHHHcCCC
Confidence 4555667888888888875 344444411110 00 01110122 2344577899999999
Q ss_pred EEEEeCCch-----------h--hhHHHHhccCCCCeeeccH----HHHHHHHHhc-CCCCCCCCCCEEEEEecHHHHhh
Q 026201 168 CIVMPCHLS-----------H--IWHDEVCKGCSVPFLHVSE----CVAKELKEAN-MKPLEAGSPLRIGVLAKNAILTA 229 (241)
Q Consensus 168 ~IvIaCNTA-----------H--~~~d~l~~~~~vPil~Iid----~t~~~i~~~~-~k~~~~~~~~rVGLLaT~~T~~s 229 (241)
+|-+..-+. . .+..++++.+++|++.... ..++++.+.| .+ .-.+|+.....-
T Consensus 262 ~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~aD---------~V~iGR~~lanP 332 (363)
T 3l5l_A 262 LLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQLD---------LVSVGRAHLADP 332 (363)
T ss_dssp EEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTSCS---------EEECCHHHHHCT
T ss_pred EEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCCcc---------EEEecHHHHhCc
Confidence 999876321 1 1347788888999987643 3455555554 32 334676666555
Q ss_pred hhHHHHHHhcC
Q 026201 230 GFYQEKLQHED 240 (241)
Q Consensus 230 ~~Y~~~L~~~G 240 (241)
++..+..+..|
T Consensus 333 dl~~k~~~~lg 343 (363)
T 3l5l_A 333 HWAYFAAKELG 343 (363)
T ss_dssp THHHHHHHHTT
T ss_pred hHHHHHHHHcC
Confidence 55555544444
No 281
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=30.61 E-value=98 Score=26.65 Aligned_cols=37 Identities=14% Similarity=0.072 Sum_probs=22.4
Q ss_pred HHHhCCcEEEEeCCch-hhh--HHHHhccCC----CCeeeccHH
Q 026201 161 LEKAGARCIVMPCHLS-HIW--HDEVCKGCS----VPFLHVSEC 197 (241)
Q Consensus 161 Le~~Gad~IvIaCNTA-H~~--~d~l~~~~~----vPil~Iid~ 197 (241)
|++-.+|+|+|++.+. |+- ...++...+ -|+-.=++.
T Consensus 71 l~~~~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~t~~e 114 (390)
T 4h3v_A 71 LERDDVQLVDVCTPGDSHAEIAIAALEAGKHVLCEKPLANTVAE 114 (390)
T ss_dssp TTCTTCSEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHH
T ss_pred hcCCCCCEEEEeCChHHHHHHHHHHHHcCCCceeecCcccchhH
Confidence 5677899999998654 432 255666533 365443333
No 282
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=30.60 E-value=1.2e+02 Score=24.94 Aligned_cols=69 Identities=10% Similarity=0.050 Sum_probs=40.0
Q ss_pred HHHHHHHHhCCcEEEEeCCchh-----hhH---HHHhccCCCCeeec-----cHHHHHHHHHhcCCCCCCCCCCEEEEEe
Q 026201 156 RKRVFLEKAGARCIVMPCHLSH-----IWH---DEVCKGCSVPFLHV-----SECVAKELKEANMKPLEAGSPLRIGVLA 222 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH-----~~~---d~l~~~~~vPil~I-----id~t~~~i~~~~~k~~~~~~~~rVGLLa 222 (241)
+.++.++++|||.|.+..-++. ..+ .+++ .+++|++-. .+ -++.+.+.|.. .| ++|
T Consensus 34 ~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~-~~~ipvi~~Ggi~~~~-~~~~~~~~Gad--------~V-~lg 102 (241)
T 1qo2_A 34 ELVEKLIEEGFTLIHVVDLSNAIENSGENLPVLEKLS-EFAEHIQIGGGIRSLD-YAEKLRKLGYR--------RQ-IVS 102 (241)
T ss_dssp HHHHHHHHTTCCCEEEEEHHHHHHCCCTTHHHHHHGG-GGGGGEEEESSCCSHH-HHHHHHHTTCC--------EE-EEC
T ss_pred HHHHHHHHcCCCEEEEecccccccCCchhHHHHHHHH-hcCCcEEEECCCCCHH-HHHHHHHCCCC--------EE-EEC
Confidence 3456788999999988654332 112 4455 678898752 23 34445556654 55 566
Q ss_pred cHHHHhhhhHHHH
Q 026201 223 KNAILTAGFYQEK 235 (241)
Q Consensus 223 T~~T~~s~~Y~~~ 235 (241)
+..--+...+.+.
T Consensus 103 ~~~l~~p~~~~~~ 115 (241)
T 1qo2_A 103 SKVLEDPSFLKSL 115 (241)
T ss_dssp HHHHHCTTHHHHH
T ss_pred chHhhChHHHHHH
Confidence 6654444444444
No 283
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=30.39 E-value=1.2e+02 Score=26.30 Aligned_cols=55 Identities=5% Similarity=-0.070 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhCCcEEEEe----CCchhhhH---HHHhccC-CCCe-------eeccHHHHHHHHHhcCC
Q 026201 154 LRRKRVFLEKAGARCIVMP----CHLSHIWH---DEVCKGC-SVPF-------LHVSECVAKELKEANMK 208 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIa----CNTAH~~~---d~l~~~~-~vPi-------l~Iid~t~~~i~~~~~k 208 (241)
+.+.++.+++.|||.|.++ .-|.+..+ ++|++.+ ++|+ .++..+-..++.+.|.+
T Consensus 161 ~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~ 230 (302)
T 2ftp_A 161 VAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIA 230 (302)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCC
Confidence 3445567889999999999 22333333 5566666 4664 23344444455566654
No 284
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=30.31 E-value=1.2e+02 Score=28.17 Aligned_cols=51 Identities=12% Similarity=0.052 Sum_probs=31.5
Q ss_pred HHHHHHHhCCcEEEEeCC-----------------chh--hhHHHHhccCCCCee---eccH-HHHHHHHHhcCC
Q 026201 157 KRVFLEKAGARCIVMPCH-----------------LSH--IWHDEVCKGCSVPFL---HVSE-CVAKELKEANMK 208 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCN-----------------TAH--~~~d~l~~~~~vPil---~Iid-~t~~~i~~~~~k 208 (241)
.++.|+++|||+|++ .+ +.. ....++.+.+++|++ +|-. .-+..+.+.|.+
T Consensus 309 ~a~~l~~aGad~I~v-g~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~~ipVia~GGI~~~~di~kala~GAd 382 (514)
T 1jcn_A 309 QAKNLIDAGVDGLRV-GMGCGSICITQEVMACGRPQGTAVYKVAEYARRFGVPIIADGGIQTVGHVVKALALGAS 382 (514)
T ss_dssp HHHHHHHHTCSEEEE-CSSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHcCCCEEEE-CCCCCcccccccccCCCccchhHHHHHHHHHhhCCCCEEEECCCCCHHHHHHHHHcCCC
Confidence 456789999999988 32 111 123667777899999 4543 223344445653
No 285
>2vpq_A Acetyl-COA carboxylase; bacteria, ATP-grAsp domain, biotin carboxylase, ligase; HET: ANP; 2.1A {Staphylococcus aureus}
Probab=30.27 E-value=2.6e+02 Score=24.84 Aligned_cols=35 Identities=14% Similarity=0.318 Sum_probs=20.1
Q ss_pred HHHHhCCcEEEEeCCch--hhhHHHHhccCCCCeeec
Q 026201 160 FLEKAGARCIVMPCHLS--HIWHDEVCKGCSVPFLHV 194 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTA--H~~~d~l~~~~~vPil~I 194 (241)
..++.++|+|+..+-.. ...+.++.+..++|+++-
T Consensus 68 ~~~~~~~d~v~~~~g~~~e~~~~~~~~~~~gi~~~g~ 104 (451)
T 2vpq_A 68 IATSTGCDGVHPGYGFLAENADFAELCEACQLKFIGP 104 (451)
T ss_dssp HHHHTTCSEEECCSSTTTTCHHHHHHHHTTTCEESSS
T ss_pred HHHHcCCCEEEECCCccccCHHHHHHHHHcCCeEECC
Confidence 44567999887654311 122333345678887764
No 286
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=30.16 E-value=49 Score=29.90 Aligned_cols=37 Identities=16% Similarity=0.282 Sum_probs=27.3
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhH---------------HHHhccCCCCee
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWH---------------DEVCKGCSVPFL 192 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~---------------d~l~~~~~vPil 192 (241)
++.+|.++-|+|+++++-=|+|-.| ++|++.+++|++
T Consensus 157 ea~~Fv~~TgvD~LAvaiGt~HG~Yk~~~~p~~~L~~~~L~~I~~~~~vpLV 208 (323)
T 2isw_A 157 DAKKFVELTGVDALAVAIGTSHGAYKFKSESDIRLAIDRVKTISDLTGIPLV 208 (323)
T ss_dssp HHHHHHHHHCCSEEEECSSCCSSSBCCCC----CCCCHHHHHHHHHHCSCEE
T ss_pred HHHHHHHHHCCCEEEEecCccccccCCCCCcccccCHHHHHHHHHHhCCCeE
Confidence 3446778899999999999999532 345556678866
No 287
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=30.02 E-value=52 Score=28.52 Aligned_cols=36 Identities=8% Similarity=0.024 Sum_probs=25.3
Q ss_pred HHHHHHHhCCcEEEEeCCchhh---------hHHHHhccCCCCee
Q 026201 157 KRVFLEKAGARCIVMPCHLSHI---------WHDEVCKGCSVPFL 192 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~---------~~d~l~~~~~vPil 192 (241)
.++..++.|||.+++...-... +|++|.+.+++||+
T Consensus 83 la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPii 127 (288)
T 2nuw_A 83 LVKFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARISSHSLY 127 (288)
T ss_dssp HHHHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHHCCSCEE
T ss_pred HHHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 4456789999998886543222 45778888888854
No 288
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=29.64 E-value=1.7e+02 Score=21.73 Aligned_cols=93 Identities=13% Similarity=0.064 Sum_probs=51.1
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhCCc
Q 026201 88 GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGAR 167 (241)
Q Consensus 88 GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~Le~~Gad 167 (241)
|.+...+.+++.++.+.... ..+.+|+..-- ..|... ....+.+...+.+.+.++.+. ++.
T Consensus 46 g~~G~~~~~~~~~~~~~~~~-~~pd~vvi~~G---------~ND~~~-------~~~~~~~~~~~~l~~~i~~~~--~~~ 106 (195)
T 1yzf_A 46 GMPGDTTEDGLKRLNKEVLI-EKPDEVVIFFG---------ANDASL-------DRNITVATFRENLETMIHEIG--SEK 106 (195)
T ss_dssp ECTTCCHHHHHHHHHHHTGG-GCCSEEEEECC---------TTTTCT-------TSCCCHHHHHHHHHHHHHHHC--GGG
T ss_pred CCCCCCHHHHHHHHHHhhhh-cCCCEEEEEee---------ccccCc-------cCCCCHHHHHHHHHHHHHHhc--CCE
Confidence 55555666777766554433 35677776511 122210 012244566667777777775 888
Q ss_pred EEEEeCCch---------hh-------hHHHHhccCCCCeeeccHHHH
Q 026201 168 CIVMPCHLS---------HI-------WHDEVCKGCSVPFLHVSECVA 199 (241)
Q Consensus 168 ~IvIaCNTA---------H~-------~~d~l~~~~~vPil~Iid~t~ 199 (241)
+|++.-.-. .. .+.++.+..+++++++-+...
T Consensus 107 vi~~~~~p~~~~~~~~~~~~~~~~~n~~~~~~a~~~~~~~iD~~~~~~ 154 (195)
T 1yzf_A 107 VILITPPYADSGRRPERPQTRIKELVKVAQEVGAAHNLPVIDLYKAMT 154 (195)
T ss_dssp EEEECCCCCCTTTCTTSCHHHHHHHHHHHHHHHHHTTCCEECHHHHHH
T ss_pred EEEEcCCCCccccchhhhHHHHHHHHHHHHHHHHHhCCeEEehHHHHh
Confidence 888754311 11 123344556889998755443
No 289
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porph structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=29.53 E-value=34 Score=28.45 Aligned_cols=50 Identities=16% Similarity=0.110 Sum_probs=36.7
Q ss_pred HHHHHhCCcEEEEeCC-chhhhHHHHhc-------cC-CCCeeeccHHHHHHHHHhcCC
Q 026201 159 VFLEKAGARCIVMPCH-LSHIWHDEVCK-------GC-SVPFLHVSECVAKELKEANMK 208 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCN-TAH~~~d~l~~-------~~-~vPil~Iid~t~~~i~~~~~k 208 (241)
+.|....+|.|++.+- +++.|++.+.+ .. +++++-|.+.|++.+++.|++
T Consensus 177 ~~l~~~~~d~v~ftS~~~v~~~~~~~~~~~~~~~~l~~~~~~~aIG~~Ta~~l~~~G~~ 235 (261)
T 1wcw_A 177 EALLRGEVDALAFVAAIQVEFLFEGAKDPKALREALNTRVKALAVGRVTADALREWGVK 235 (261)
T ss_dssp HHHHHTCCSEEEECSHHHHHHHHHHCSCHHHHHHHHHHTSEEEEESHHHHHHHHHTTCC
T ss_pred HHHHcCCCCEEEEECHHHHHHHHHHHhhccchhHHhhcCCEEEEECHHHHHHHHHcCCC
Confidence 4566778999988764 45566665432 12 678999999999999998875
No 290
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=29.50 E-value=1e+02 Score=26.58 Aligned_cols=36 Identities=6% Similarity=0.058 Sum_probs=25.0
Q ss_pred HHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCee
Q 026201 157 KRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFL 192 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil 192 (241)
.++..++.|||.+++...-.. .+|++|.+.+++||+
T Consensus 88 la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPii 131 (292)
T 2ojp_A 88 LTQRFNDSGIVGCLTVTPYYNRPSQEGLYQHFKAIAEHTDLPQI 131 (292)
T ss_dssp HHHHTTTSSCSEEEEECCCSSCCCHHHHHHHHHHHHTTCSSCEE
T ss_pred HHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEE
Confidence 345678899998888665321 245778888888854
No 291
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=29.31 E-value=76 Score=28.33 Aligned_cols=38 Identities=21% Similarity=0.089 Sum_probs=25.9
Q ss_pred HHHHHHHhCCcEEEEeCCchhhhHHHHhcc-CCCCeeec
Q 026201 157 KRVFLEKAGARCIVMPCHLSHIWHDEVCKG-CSVPFLHV 194 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~-~~vPil~I 194 (241)
.++.|.+.|+|.|+...........++.+. .++||+.+
T Consensus 78 ~l~~l~~~g~d~Ii~~g~~~~~~~~~vA~~~Pdv~fv~i 116 (356)
T 3s99_A 78 SIKRIARAGNKLIFTTSFGYMDPTVKVAKKFPDVKFEHA 116 (356)
T ss_dssp HHHHHHHTTCSEEEECSGGGHHHHHHHHTTCTTSEEEEE
T ss_pred HHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEE
Confidence 446788899999888765554445555555 46888765
No 292
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=29.28 E-value=66 Score=28.84 Aligned_cols=64 Identities=17% Similarity=0.158 Sum_probs=43.7
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH-------HH--HHHHHhcCCCCCCCCCCEEEEEec
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-------VA--KELKEANMKPLEAGSPLRIGVLAK 223 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~-------t~--~~i~~~~~k~~~~~~~~rVGLLaT 223 (241)
+.+.++-|.+. +|+|||=.. .|-..+++.+..++||||-.+. .+ --+++...+ .++.+|+++|-
T Consensus 91 l~DTarvls~~-~D~iviR~~-~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~----l~gl~va~vGD 163 (321)
T 1oth_A 91 LTDTARVLSSM-ADAVLARVY-KQSDLDTLAKEASIPIINGLSDLYHPIQILADYLTLQEHYSS----LKGLTLSWIGD 163 (321)
T ss_dssp HHHHHHHHHHH-CSEEEEECS-CHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHHHHHSC----CTTCEEEEESC
T ss_pred HHHHHHHHHHh-CCEEEEeCC-ChhHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHHHHhCC----cCCcEEEEECC
Confidence 44455688888 799999865 5777888999999999997542 11 113333211 24569999997
No 293
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=29.18 E-value=84 Score=24.19 Aligned_cols=40 Identities=10% Similarity=0.146 Sum_probs=30.4
Q ss_pred HHHHHHHHHhCCcEEEEeCCchh-h---hHHHHhccCCCCeeec
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSH-I---WHDEVCKGCSVPFLHV 194 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH-~---~~d~l~~~~~vPil~I 194 (241)
.+..+.+++..|.+++||.|..- - ++..+.+..+||++-+
T Consensus 30 ~~v~Kai~~gka~LViiA~D~~p~~~~~~i~~lc~~~~Ip~~~v 73 (126)
T 2xzm_U 30 HEVLRTIEAKQALFVCVAEDCDQGNYVKLVKALCAKNEIKYVSV 73 (126)
T ss_dssp HHHHHHHHHTCCSEEEEESSCCSTTHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCCceEEEEeCCCChHHHHHHHHHHHHHhCCCEEEE
Confidence 44556788889999999999843 3 3566777789998864
No 294
>1p3d_A UDP-N-acetylmuramate--alanine ligase; alpha/beta protein; HET: UMA ANP; 1.70A {Haemophilus influenzae} SCOP: c.5.1.1 c.59.1.1 c.72.2.1 PDB: 1gqq_A* 1p31_A* 1gqy_A*
Probab=29.00 E-value=1e+02 Score=28.34 Aligned_cols=66 Identities=12% Similarity=0.148 Sum_probs=39.6
Q ss_pred hCCcEEEEeCCc--hhhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhh-hhHHHHHHhcC
Q 026201 164 AGARCIVMPCHL--SHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTA-GFYQEKLQHED 240 (241)
Q Consensus 164 ~Gad~IvIaCNT--AH~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s-~~Y~~~L~~~G 240 (241)
.|+|++|+.--- .|..+.+.++ .++|+++.++...+.+.. .+ .|+|-||.|-=.+ .+-...|++.|
T Consensus 76 ~~a~~vv~s~~i~~~~~~~~~a~~-~~i~vl~~~~~l~~~~~~--~~--------vI~VTGTnGKTTTt~ml~~iL~~~G 144 (475)
T 1p3d_A 76 EGASVVVVSSAIKDDNPELVTSKQ-KRIPVIQRAQMLAEIMRF--RH--------GIAVAGTHGKTTTTAMISMIYTQAK 144 (475)
T ss_dssp TTCSEEEECTTSCTTCHHHHHHHH-TTCCEEEHHHHHHHHHHT--SE--------EEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCCCCCCHHHHHHHH-cCCcEEEHHHHHHHHhcC--CC--------EEEEECCCCHHHHHHHHHHHHHhCC
Confidence 489988875321 1333333332 479999988876655432 22 7999999874333 34445555555
No 295
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=28.98 E-value=25 Score=30.26 Aligned_cols=17 Identities=29% Similarity=0.268 Sum_probs=14.2
Q ss_pred CCeEEEEeCCChHHHHH
Q 026201 80 ANTVGIVGGASVDSTLN 96 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~ 96 (241)
+++||||||.|-..+.-
T Consensus 21 ~~~I~iIGg~G~mG~~l 37 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLF 37 (298)
T ss_dssp CCCEEEETTTSHHHHHH
T ss_pred CCEEEEEcCCCHHHHHH
Confidence 57899998899987763
No 296
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=28.78 E-value=1.9e+02 Score=25.06 Aligned_cols=73 Identities=10% Similarity=0.016 Sum_probs=45.0
Q ss_pred HHHHHhCCcEEEEeCCchhhh-HHHHhccCCCCeee------------------ccHHHHHHHHHhcCCCCCCCCCCEEE
Q 026201 159 VFLEKAGARCIVMPCHLSHIW-HDEVCKGCSVPFLH------------------VSECVAKELKEANMKPLEAGSPLRIG 219 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~------------------Iid~t~~~i~~~~~k~~~~~~~~rVG 219 (241)
..|.+.|+.+|+=|.++.... ...+.+..++|+|. ...+.++.++..+.+ +|+
T Consensus 63 ~~li~~~V~aiiG~~~S~~~~a~~~i~~~~~iP~Is~s~~~~~~~~~~~~~~p~~~~a~~~~~~~~gw~--------~va 134 (389)
T 3o21_A 63 CSQFSRGVYAIFGFYDQMSMNTLTSFCGALHTSFVTPSFPTDADVQFVIQMRPALKGAILSLLSYYKWE--------KFV 134 (389)
T ss_dssp HHHHTTTCSCEEECCCTTTHHHHHHHHHHHTCCEEECSCCCSSCCSSEEECSCCSHHHHHHHHHHHTCC--------EEE
T ss_pred HHHHhcCcEEEEeCCChhHHHHHHHHhccCCCceeecCCCCccCCceEEEEccCHHHHHHHHHHhCCCC--------EEE
Confidence 345556999988887766654 36666677788772 234556666665555 999
Q ss_pred EEecHHHHh---hhhHHHHHHhcC
Q 026201 220 VLAKNAILT---AGFYQEKLQHED 240 (241)
Q Consensus 220 LLaT~~T~~---s~~Y~~~L~~~G 240 (241)
++. +...- ...+.+.+++.|
T Consensus 135 ii~-d~~~g~~~~~~~~~~~~~~g 157 (389)
T 3o21_A 135 YLY-DTERGFSVLQAIMEAAVQNN 157 (389)
T ss_dssp EEE-CSTTCSHHHHHHHHHHHHTT
T ss_pred EEE-cCcHHHHHHHHHHHHhhcCC
Confidence 998 43221 123445566555
No 297
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=28.40 E-value=1.6e+02 Score=25.26 Aligned_cols=64 Identities=5% Similarity=-0.004 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhC-CcEEEEeCCc--------------------------------hhhhHHHHhccC-CCCeeeccH---
Q 026201 154 LRRKRVFLEKAG-ARCIVMPCHL--------------------------------SHIWHDEVCKGC-SVPFLHVSE--- 196 (241)
Q Consensus 154 l~~~~~~Le~~G-ad~IvIaCNT--------------------------------AH~~~d~l~~~~-~vPil~Iid--- 196 (241)
+.+.++.++++| +|+|++..-| +-.+..++++.+ ++||+....
T Consensus 176 ~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~~~ipvi~~GGI~~ 255 (314)
T 2e6f_A 176 FDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRCPDKLVFGCGGVYS 255 (314)
T ss_dssp HHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHCTTSEEEEESSCCS
T ss_pred HHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 344567889999 9999877533 012346677788 899986533
Q ss_pred --HHHHHHHHhcCCCCCCCCCCEEEEEecHHHH
Q 026201 197 --CVAKELKEANMKPLEAGSPLRIGVLAKNAIL 227 (241)
Q Consensus 197 --~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~ 227 (241)
.+.+.+ +.|.+ .--+||....
T Consensus 256 ~~da~~~l-~~GAd---------~V~ig~~~l~ 278 (314)
T 2e6f_A 256 GEDAFLHI-LAGAS---------MVQVGTALQE 278 (314)
T ss_dssp HHHHHHHH-HHTCS---------SEEECHHHHH
T ss_pred HHHHHHHH-HcCCC---------EEEEchhhHh
Confidence 233333 45654 3346776654
No 298
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=28.27 E-value=83 Score=27.42 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=26.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+.+ ++|.+.|+|-|++.+.|--.+
T Consensus 27 dg~iD~~~l~~lv----~~li~~Gv~gl~v~GtTGE~~ 60 (301)
T 1xky_A 27 NGNIDFAKTTKLV----NYLIDNGTTAIVVGGTTGESP 60 (301)
T ss_dssp TSSBCHHHHHHHH----HHHHHTTCCEEEESSTTTTGG
T ss_pred CCCcCHHHHHHHH----HHHHHcCCCEEEECccccChh
Confidence 4567777765544 689999999999998887654
No 299
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=28.27 E-value=68 Score=27.74 Aligned_cols=41 Identities=20% Similarity=0.294 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCcEEEEeCCchhh--------hHHHHhccCCCCee
Q 026201 152 ENLRRKRVFLEKAGARCIVMPCHLSHI--------WHDEVCKGCSVPFL 192 (241)
Q Consensus 152 ~~l~~~~~~Le~~Gad~IvIaCNTAH~--------~~d~l~~~~~vPil 192 (241)
+...+.++..++.|||.+++.+.-... +|.+|.+.+++|++
T Consensus 82 ~~ai~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPii 130 (289)
T 2yxg_A 82 EEAIELSVFAEDVGADAVLSITPYYNKPTQEGLRKHFGKVAESINLPIV 130 (289)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEE
No 300
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=28.25 E-value=1.2e+02 Score=26.23 Aligned_cols=81 Identities=14% Similarity=0.050 Sum_probs=0.0
Q ss_pred EEEEe--CCChHHHHHHHHHHHHHhccC--CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHH
Q 026201 83 VGIVG--GASVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKR 158 (241)
Q Consensus 83 IGIIG--GmGp~AT~~fy~kI~~~t~~d--~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~ 158 (241)
|-+.| |=++.=|.+=.+++++.+.+. ...++++-- ...+-.+.++..+
T Consensus 41 l~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGv-------------------------g~~~t~~ai~la~--- 92 (294)
T 3b4u_A 41 VTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGV-------------------------LVDSIEDAADQSA--- 92 (294)
T ss_dssp EEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEE-------------------------CCSSHHHHHHHHH---
T ss_pred EEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeC-------------------------CCccHHHHHHHHH---
Q ss_pred HHHHHhCCcEEEEeCCchhh---------hHHHHhccC---CCCee
Q 026201 159 VFLEKAGARCIVMPCHLSHI---------WHDEVCKGC---SVPFL 192 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~---------~~d~l~~~~---~vPil 192 (241)
..++.|||.+++...-... +|.+|.+.+ ++|++
T Consensus 93 -~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~p~~~lPii 137 (294)
T 3b4u_A 93 -EALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSKIGKDARDIL 137 (294)
T ss_dssp -HHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHHHCTTCCCEE
T ss_pred -HHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHhcCCCCCcEE
No 301
>2xhf_A Peroxiredoxin 5; oxidoreductase, antioxidant enzymes; 1.30A {Alvinella pompejana}
Probab=28.10 E-value=85 Score=25.17 Aligned_cols=52 Identities=8% Similarity=0.091 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhCCc-EEEEeCCchhh---hHHHHhccCCCCeeeccHHHHHHHHHhcC
Q 026201 154 LRRKRVFLEKAGAR-CIVMPCHLSHI---WHDEVCKGCSVPFLHVSECVAKELKEANM 207 (241)
Q Consensus 154 l~~~~~~Le~~Gad-~IvIaCNTAH~---~~d~l~~~~~vPil~Iid~t~~~i~~~~~ 207 (241)
+++....|++.||+ ++.|.+|+... |.+......++|+++ |.-.+..++.|+
T Consensus 65 f~~~~~ef~~~gv~~VigIS~D~~~~~~~w~~~~~~~~~f~lLS--D~~~~~a~ayGv 120 (171)
T 2xhf_A 65 YLSLYDKFKEEGYHTIACIAVNDPFVMAAWGKTVDPEHKIRMLA--DMHGEFTRALGT 120 (171)
T ss_dssp HHHTHHHHHHTTCCEEEEEESSCHHHHHHHHHHHCTTCCSEEEE--CTTSHHHHHHTC
T ss_pred HHHHHHHHHHCCCCEEEEEeCCCHHHHHHHHHhcCCCCCeEEEE--eCCchHHHHhCC
Confidence 44556778999998 99999999854 444443222677777 444444555554
No 302
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=28.01 E-value=2.6e+02 Score=23.30 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=18.5
Q ss_pred HHHHHh-CCcEEEEeCCchhhh-HHHHhccCCCCeee
Q 026201 159 VFLEKA-GARCIVMPCHLSHIW-HDEVCKGCSVPFLH 193 (241)
Q Consensus 159 ~~Le~~-Gad~IvIaCNTAH~~-~d~l~~~~~vPil~ 193 (241)
+.|... ++++|+-+..+.... ...+.+..++|+|.
T Consensus 68 ~~li~~~~v~~i~g~~~s~~~~a~~~~~~~~~vp~i~ 104 (353)
T 4gnr_A 68 TNLVTQSKVSAVVGPATSGATAAAVANATKAGVPLIS 104 (353)
T ss_dssp HHHHHTSCCSEEECCCSHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHhhCCceEEeccccCcccceehhhhhccCcceEe
Confidence 344444 456665555544433 34555566676665
No 303
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=28.00 E-value=70 Score=24.82 Aligned_cols=30 Identities=23% Similarity=0.524 Sum_probs=18.4
Q ss_pred cCCCC----eeeccH-------HHHHHHHHhcCCCCCCCCCCEEEEEecHHH
Q 026201 186 GCSVP----FLHVSE-------CVAKELKEANMKPLEAGSPLRIGVLAKNAI 226 (241)
Q Consensus 186 ~~~vP----il~Iid-------~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T 226 (241)
...+| ++++-| ..++.+.+.|+ -|+||.+|
T Consensus 19 g~~lP~~gvliSv~d~dK~~l~~~a~~l~~lGf-----------~i~AT~GT 59 (143)
T 2yvq_A 19 GFKIPQKGILIGIQQSFRPRFLGVAEQLHNEGF-----------KLFATEAT 59 (143)
T ss_dssp SCCCCCSEEEEECCGGGHHHHHHHHHHHHTTTC-----------EEEEEHHH
T ss_pred CCCCCCCCEEEEecccchHHHHHHHHHHHHCCC-----------EEEECchH
Confidence 44555 666655 34555555544 37999998
No 304
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=27.56 E-value=1.2e+02 Score=26.30 Aligned_cols=36 Identities=6% Similarity=0.050 Sum_probs=24.3
Q ss_pred HHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCC-CCee
Q 026201 157 KRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCS-VPFL 192 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~-vPil 192 (241)
.++..++.|||.+++...-.. .+|++|.+.++ +||+
T Consensus 98 la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~~lPii 142 (303)
T 2wkj_A 98 LAASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDSADGLPMV 142 (303)
T ss_dssp HHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 445678899998888655321 14577777777 8853
No 305
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=27.48 E-value=89 Score=27.13 Aligned_cols=34 Identities=9% Similarity=-0.069 Sum_probs=26.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+. +++|.+.|+|-|++.+.|--.+
T Consensus 22 dg~iD~~~l~~l----v~~li~~Gv~gl~~~GttGE~~ 55 (297)
T 3flu_A 22 DGSIHYEQLRDL----IDWHIENGTDGIVAVGTTGESA 55 (297)
T ss_dssp TSCBCHHHHHHH----HHHHHHTTCCEEEESSTTTTGG
T ss_pred CCCcCHHHHHHH----HHHHHHcCCCEEEeCccccCcc
Confidence 456677776554 4689999999999999987764
No 306
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=27.44 E-value=2.1e+02 Score=21.97 Aligned_cols=94 Identities=13% Similarity=-0.048 Sum_probs=51.1
Q ss_pred cchhhccCCeEEEEe-CCChHHHHHHHHHHHHHhccCCCCCEEEec-Cccch-HHhhhcC-CChhhhhcccCCCCCCCHH
Q 026201 73 SDALLNQANTVGIVG-GASVDSTLNLLGKLVQLSGEENDFPFLLCS-DPLLN-KELLSHD-RSSFSSLNCKGGGVQLDDS 148 (241)
Q Consensus 73 ~~~~~~~~k~IGIIG-GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S-~p~i~-d~ll~~~-~~~~~~~~~~~~~~~~d~~ 148 (241)
....+.+.+.|=|+| |.+..++.++..++... ..++...+ ++... ..+..-. .|..-.. ...+.-.
T Consensus 32 ~~~~i~~a~~I~i~G~G~S~~~a~~~~~~l~~~-----g~~~~~~~~~~~~~~~~~~~~~~~d~~i~i-----S~sG~t~ 101 (187)
T 3sho_A 32 AVEAICRADHVIVVGMGFSAAVAVFLGHGLNSL-----GIRTTVLTEGGSTLTITLANLRPTDLMIGV-----SVWRYLR 101 (187)
T ss_dssp HHHHHHHCSEEEEECCGGGHHHHHHHHHHHHHT-----TCCEEEECCCTHHHHHHHHTCCTTEEEEEE-----CCSSCCH
T ss_pred HHHHHHhCCEEEEEecCchHHHHHHHHHHHHhc-----CCCEEEecCCchhHHHHHhcCCCCCEEEEE-----eCCCCCH
Confidence 345566788999998 77777777777777542 22344444 23221 1111111 1111110 0122223
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEeCCchhhhH
Q 026201 149 LIVENLRRKRVFLEKAGARCIVMPCHLSHIWH 180 (241)
Q Consensus 149 ~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~ 180 (241)
++ .+.++.+.+.|+..|+|.+|.-....
T Consensus 102 ~~----~~~~~~ak~~g~~vi~IT~~~~s~l~ 129 (187)
T 3sho_A 102 DT----VAALAGAAERGVPTMALTDSSVSPPA 129 (187)
T ss_dssp HH----HHHHHHHHHTTCCEEEEESCTTSHHH
T ss_pred HH----HHHHHHHHHCCCCEEEEeCCCCCcch
Confidence 33 34556788999999999998766544
No 307
>3v7q_A Probable ribosomal protein YLXQ; L7AE superfamily, K-turn binding, K-turn RNA, hypothetical R protein, RNA binding protein; HET: CIT; 1.55A {Bacillus subtilis}
Probab=27.40 E-value=95 Score=22.60 Aligned_cols=48 Identities=19% Similarity=0.172 Sum_probs=35.2
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhHHHH---hccCCCCeeeccHHHHHHHHHh
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWHDEV---CKGCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~d~l---~~~~~vPil~Iid~t~~~i~~~ 205 (241)
+..+.+++..|.++++|.+..-.....+ .+..++|++.+ .+-+++-..
T Consensus 26 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~vp~~~~--~s~~eLG~A 76 (101)
T 3v7q_A 26 LVIKEIRNARAKLVLLTEDASSNTAKKVTDKCNYYKVPYKKV--ESRAVLGRS 76 (101)
T ss_dssp HHHHHHHTTCCSEEEEETTSCHHHHHHHHHHHHHTTCCEEEE--SCHHHHHHH
T ss_pred hhHHHHhcCceeEEEEeccccccchhhhcccccccCCCeeee--chHHHHHhh
Confidence 3446778888999999999987765444 55678999987 455566554
No 308
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=27.38 E-value=84 Score=23.77 Aligned_cols=49 Identities=18% Similarity=0.298 Sum_probs=34.8
Q ss_pred HHHHHHHHHhCCcEEEEeCCchhh-h---HHHHhccCCCCeeeccHHHHHHHHHh
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSHI-W---HDEVCKGCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH~-~---~d~l~~~~~vPil~Iid~t~~~i~~~ 205 (241)
.+..+.+++..|.+++||.|..-. + +..+.+..+||++-+- .-+++-+.
T Consensus 26 ~~v~kai~~gkakLViiA~D~~~~~~~~~l~~lc~~~~VP~~~v~--sk~eLG~a 78 (121)
T 2lbw_A 26 KEVVKALRKGEKGLVVIAGDIWPADVISHIPVLCEDHSVPYIFIP--SKQDLGAA 78 (121)
T ss_dssp HHHHHHHHHSCCCEEEECTTCSCTTHHHHHHHHHHHTCCCEEECC--CHHHHHHH
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHhcCCcEEEEC--CHHHHHHH
Confidence 345567888899999999998764 2 4666777899988764 33445444
No 309
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=27.35 E-value=1.3e+02 Score=25.51 Aligned_cols=55 Identities=15% Similarity=0.108 Sum_probs=35.1
Q ss_pred HHHHHHHHHH-hCCcEEEEeCCchh----------------hhHHHHhccCCCCee-----ec--cHHHHHHHHHhcCC
Q 026201 154 LRRKRVFLEK-AGARCIVMPCHLSH----------------IWHDEVCKGCSVPFL-----HV--SECVAKELKEANMK 208 (241)
Q Consensus 154 l~~~~~~Le~-~Gad~IvIaCNTAH----------------~~~d~l~~~~~vPil-----~I--id~t~~~i~~~~~k 208 (241)
..+.++.+++ .|+|.|-+-.+..+ .+.+++++.+++|++ ++ +...++.+.+.|.+
T Consensus 113 ~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~~~pv~vk~~~~~~~~~~~a~~l~~~G~d 191 (311)
T 1ep3_A 113 YVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVSKVPLYVKLSPNVTDIVPIAKAVEAAGAD 191 (311)
T ss_dssp HHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhcCCCEEEEECCChHHHHHHHHHHHHcCCC
Confidence 3445567777 89999988554221 123567777788876 22 24567777887765
No 310
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=27.30 E-value=74 Score=27.57 Aligned_cols=41 Identities=10% Similarity=0.168 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCcEEEEeCCchhh--------hHHHHhccCCCCee
Q 026201 152 ENLRRKRVFLEKAGARCIVMPCHLSHI--------WHDEVCKGCSVPFL 192 (241)
Q Consensus 152 ~~l~~~~~~Le~~Gad~IvIaCNTAH~--------~~d~l~~~~~vPil 192 (241)
+...+.++..++.|||.+++...-... +|.+|.+.+++||+
T Consensus 82 ~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 130 (294)
T 2ehh_A 82 HEAVHLTAHAKEVGADGALVVVPYYNKPTQRGLYEHFKTVAQEVDIPII 130 (294)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCCEE
No 311
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=27.30 E-value=2.8e+02 Score=23.28 Aligned_cols=89 Identities=7% Similarity=0.082 Sum_probs=47.8
Q ss_pred ccCCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHH
Q 026201 78 NQANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRK 157 (241)
Q Consensus 78 ~~~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~ 157 (241)
...|+||||+.-+........+.+.+...+. .+.++.+.... ++++ .+.
T Consensus 138 P~~k~vgvi~~~~~~~s~~~~~~~~~~~~~~-g~~~v~~~~~~--------------------------~~~~----~~~ 186 (302)
T 3lkv_A 138 PNVKSIGVVYNPGEANAVSLMELLKLSAAKH-GIKLVEATALK--------------------------SADV----QSA 186 (302)
T ss_dssp TTCCEEEEEECTTCHHHHHHHHHHHHHHHHT-TCEEEEEECSS--------------------------GGGH----HHH
T ss_pred CCCCEEEEEeCCCcccHHHHHHHHHHHHHHc-CCEEEEEecCC--------------------------hHHH----HHH
Confidence 3578999998877655555555444443332 34444433111 1112 222
Q ss_pred HHHHHHhCCcEEEEeC-CchhhhHH---HHhccCCCCeeeccHHH
Q 026201 158 RVFLEKAGARCIVMPC-HLSHIWHD---EVCKGCSVPFLHVSECV 198 (241)
Q Consensus 158 ~~~Le~~Gad~IvIaC-NTAH~~~d---~l~~~~~vPil~Iid~t 198 (241)
.+.| ..++|++.++. |+.-...+ .+....++|+++.-+..
T Consensus 187 ~~~l-~~~~d~i~~~~d~~~~~~~~~i~~~~~~~~iPv~~~~~~~ 230 (302)
T 3lkv_A 187 TQAI-AEKSDVIYALIDNTVASAIEGMIVAANQAKTPVFGAATSY 230 (302)
T ss_dssp HHHH-HTTCSEEEECSCHHHHHTHHHHHHHHHHTTCCEEESSHHH
T ss_pred HHhc-cCCeeEEEEeCCcchhhHHHHHHHHHhhcCCceeeccccc
Confidence 2334 34688877765 44333333 34556789999976543
No 312
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=27.18 E-value=2.5e+02 Score=23.76 Aligned_cols=26 Identities=12% Similarity=0.066 Sum_probs=15.6
Q ss_pred CeEEEEeCCChHHHHHHHHHHHHHhc
Q 026201 81 NTVGIVGGASVDSTLNLLGKLVQLSG 106 (241)
Q Consensus 81 k~IGIIGGmGp~AT~~fy~kI~~~t~ 106 (241)
++||+|||+......++++-..+...
T Consensus 130 r~Ig~i~g~~~~~~~~r~~Gf~~~~~ 155 (318)
T 2fqx_A 130 SAVGFIVGMELGMMPLFEAGFEAGVK 155 (318)
T ss_dssp CEEEEEESCCSTTTHHHHHHHHHHHH
T ss_pred cEEEEEeCcccHHHHHHHHHHHHHHH
Confidence 49999999854334444444444443
No 313
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=27.15 E-value=2.3e+02 Score=24.46 Aligned_cols=16 Identities=6% Similarity=0.243 Sum_probs=12.5
Q ss_pred HHHhCCcEEEEeCCch
Q 026201 161 LEKAGARCIVMPCHLS 176 (241)
Q Consensus 161 Le~~Gad~IvIaCNTA 176 (241)
|++..+|+|+|++.+.
T Consensus 62 l~~~~~D~V~i~tp~~ 77 (354)
T 3db2_A 62 LAREDVEMVIITVPND 77 (354)
T ss_dssp HHCSSCCEEEECSCTT
T ss_pred hcCCCCCEEEEeCChH
Confidence 4567899999998664
No 314
>1j6u_A UDP-N-acetylmuramate-alanine ligase MURC; structural genomics, TM0231, JCSG, PSI, protein structure initiative; 2.30A {Thermotoga maritima} SCOP: c.5.1.1 c.59.1.1 c.72.2.1
Probab=27.09 E-value=1.7e+02 Score=26.88 Aligned_cols=66 Identities=12% Similarity=0.061 Sum_probs=37.7
Q ss_pred CCcEEEEeCCch---hhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHh-hhhHHHHHHhcC
Q 026201 165 GARCIVMPCHLS---HIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILT-AGFYQEKLQHED 240 (241)
Q Consensus 165 Gad~IvIaCNTA---H~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~-s~~Y~~~L~~~G 240 (241)
++|+||+ .+-. |+.+.+.++ .++|+++-.+...+.+.....+ .|+|-||.|-=. +.+-...|++.|
T Consensus 71 ~~d~vV~-spgi~~~~p~~~~a~~-~gi~v~~~~e~l~~~~~~~~~~--------vI~VTGTnGKTTTt~ml~~iL~~~G 140 (469)
T 1j6u_A 71 DPDLVIK-TPAVRDDNPEIVRARM-ERVPIENRLHYFRDTLKREKKE--------EFAVTGTDGKTTTTAMVAHVLKHLR 140 (469)
T ss_dssp CCSEEEE-CTTCCTTCHHHHHHHH-TTCCEEEHHHHHHHHHHHHCCC--------EEEEECSSSHHHHHHHHHHHHHHTT
T ss_pred CCCEEEE-CCCcCCCCHHHHHHHH-cCCcEEEHHHHHHHHHhccCCC--------EEEEECCCCHHHHHHHHHHHHHHcC
Confidence 4565554 3432 444444333 4899999887766544321222 899999987433 334455555555
No 315
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=26.87 E-value=74 Score=28.01 Aligned_cols=61 Identities=18% Similarity=0.163 Sum_probs=39.3
Q ss_pred HHHHHHHHhCCcEEEEeCCchhh--------hHHHHhccCCCCee--e--------ccHHHHHHH-HHhcCCCCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHI--------WHDEVCKGCSVPFL--H--------VSECVAKEL-KEANMKPLEAGSPL 216 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~--------~~d~l~~~~~vPil--~--------Iid~t~~~i-~~~~~k~~~~~~~~ 216 (241)
+.++..++.|||.+++.+.-... +|++|.+.+++||+ | |-..++..+ .+. .+
T Consensus 110 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~---------pn 180 (315)
T 3na8_A 110 RRAQFAESLGAEAVMVLPISYWKLNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREV---------DN 180 (315)
T ss_dssp HHHHHHHHTTCSEEEECCCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHS---------TT
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcC---------CC
Confidence 34467889999999887653221 46788888888864 3 334566666 432 12
Q ss_pred EEEEEecHH
Q 026201 217 RIGVLAKNA 225 (241)
Q Consensus 217 rVGLLaT~~ 225 (241)
-||+=-|.+
T Consensus 181 IvgiKdssg 189 (315)
T 3na8_A 181 VTMVKESTG 189 (315)
T ss_dssp EEEEEECSS
T ss_pred EEEEECCCC
Confidence 677766654
No 316
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=26.81 E-value=2.4e+02 Score=22.46 Aligned_cols=36 Identities=11% Similarity=0.043 Sum_probs=26.8
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCee
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL 192 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil 192 (241)
+.+.++.++++|++.|-+- + -...+++++.+++|++
T Consensus 25 ~~~~a~~~~~~Ga~~i~~~--~-~~~i~~i~~~~~~pv~ 60 (223)
T 1y0e_A 25 MSKMALAAYEGGAVGIRAN--T-KEDILAIKETVDLPVI 60 (223)
T ss_dssp HHHHHHHHHHHTCSEEEEE--S-HHHHHHHHHHCCSCEE
T ss_pred HHHHHHHHHHCCCeeeccC--C-HHHHHHHHHhcCCCEE
Confidence 3445677899999998762 2 2446888888999997
No 317
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=26.79 E-value=66 Score=28.93 Aligned_cols=42 Identities=7% Similarity=0.069 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhCCcEEEEeCC---------chhhhHHHHhccCCCCeeeccH
Q 026201 154 LRRKRVFLEKAGARCIVMPCH---------LSHIWHDEVCKGCSVPFLHVSE 196 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCN---------TAH~~~d~l~~~~~vPil~Iid 196 (241)
+.+.++-|.+. +|+|+|=+. ..|...+++.+..++||||..+
T Consensus 93 l~DTarvLs~y-~D~IviR~~~~~~~~~~~~~~~~~~~lA~~~~vPVINa~~ 143 (324)
T 1js1_X 93 LLEAIPVMGCY-CDIIGVRSFARFENREYDYNEVIINQFIQHSGRPVFSMEA 143 (324)
T ss_dssp HHHHHHHHHHT-CSEEEEECCCCSSCHHHHHHTHHHHHHHHHSSSCEEESSC
T ss_pred HHHHHHHHHHh-CcEEEEecccccccccccccchHHHHHHhhCCCCEEECCC
Confidence 44455688888 899999765 1577788899999999999866
No 318
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=26.65 E-value=77 Score=27.59 Aligned_cols=41 Identities=15% Similarity=0.186 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCcEEEEeCCchhh--------hHHHHhccCCCCee
Q 026201 152 ENLRRKRVFLEKAGARCIVMPCHLSHI--------WHDEVCKGCSVPFL 192 (241)
Q Consensus 152 ~~l~~~~~~Le~~Gad~IvIaCNTAH~--------~~d~l~~~~~vPil 192 (241)
+...+.++..++.|||.+++...-... +|++|.+.+++||+
T Consensus 82 ~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 130 (297)
T 2rfg_A 82 VEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLYQHFKMVHDAIDIPII 130 (297)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEE
No 319
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=26.62 E-value=63 Score=28.77 Aligned_cols=72 Identities=15% Similarity=0.184 Sum_probs=48.1
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH-------HH--HHHHHhcCCCCCCCCCCEEEEEecH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-------VA--KELKEANMKPLEAGSPLRIGVLAKN 224 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~-------t~--~~i~~~~~k~~~~~~~~rVGLLaT~ 224 (241)
+.+.++-|.+. +|+|||=.. .|-..+++.+..++||||-.+. .+ --+++...+ -++.+|+++|--
T Consensus 84 l~DTarvls~~-~D~iviR~~-~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~----l~gl~va~vGD~ 157 (307)
T 2i6u_A 84 LQDTAKVLSRY-VDAIVWRTF-GQERLDAMASVATVPVINALSDEFHPCQVLADLQTIAERKGA----LRGLRLSYFGDG 157 (307)
T ss_dssp HHHHHHHHHHH-EEEEEEECS-SHHHHHHHHHHCSSCEEESCCSSCCHHHHHHHHHHHHHHHSC----CTTCEEEEESCT
T ss_pred HHHHHHHHHHh-CCEEEEecC-ChhHHHHHHhhCCCCEEcCCCCCcCccHHHHHHHHHHHHhCC----cCCeEEEEECCC
Confidence 44555788888 799999865 5777899999999999997542 11 113333211 245699999983
Q ss_pred --HHHhhhh
Q 026201 225 --AILTAGF 231 (241)
Q Consensus 225 --~T~~s~~ 231 (241)
.+..|-+
T Consensus 158 ~~rva~Sl~ 166 (307)
T 2i6u_A 158 ANNMAHSLL 166 (307)
T ss_dssp TSHHHHHHH
T ss_pred CcCcHHHHH
Confidence 5555443
No 320
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=26.61 E-value=1.6e+02 Score=27.58 Aligned_cols=53 Identities=23% Similarity=0.206 Sum_probs=34.4
Q ss_pred HHHHHHHHhCCcEEEEeCCchhh-----hHHHHhccC-CCCeee--c-cHHHHHHHHHhcCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHI-----WHDEVCKGC-SVPFLH--V-SECVAKELKEANMK 208 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~-----~~d~l~~~~-~vPil~--I-id~t~~~i~~~~~k 208 (241)
+.++.|.++|+|+|++-+..-|. +.+++++.+ ++|++- + -...++.+.+.|.+
T Consensus 232 ~~a~~l~~aG~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD 293 (490)
T 4avf_A 232 ERVAALVAAGVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGAD 293 (490)
T ss_dssp HHHHHHHHTTCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCS
T ss_pred HHHHHHhhcccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCC
Confidence 34567888999999986554442 346677777 678643 1 23456667777775
No 321
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=26.60 E-value=62 Score=28.31 Aligned_cols=75 Identities=12% Similarity=0.155 Sum_probs=55.3
Q ss_pred HHHHHhCCcEEEEeCC------chhh-hHHHHhccCCCCeeeccHH-----------------HHHHHHHhcCCCCCCCC
Q 026201 159 VFLEKAGARCIVMPCH------LSHI-WHDEVCKGCSVPFLHVSEC-----------------VAKELKEANMKPLEAGS 214 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCN------TAH~-~~d~l~~~~~vPil~Iid~-----------------t~~~i~~~~~k~~~~~~ 214 (241)
..-++.|||-|=+++| |.++ .+..+++.+++|+.=|+.+ -++.+++.|.+
T Consensus 15 ~~A~~~GAdRIELc~~L~~GGlTPS~g~i~~~~~~~~ipv~vMIRPR~GdF~Ys~~E~~~M~~Di~~~~~~Gad------ 88 (256)
T 1twd_A 15 LTAQQNGADRVELCAAPKEGGLTPSLGVLKSVRQRVTIPVHPIIRPRGGDFCYSDGEFAAILEDVRTVRELGFP------ 88 (256)
T ss_dssp HHHHHTTCSEEEECBCGGGTCBCCCHHHHHHHHHHCCSCEEEBCCSSSSCSCCCHHHHHHHHHHHHHHHHTTCS------
T ss_pred HHHHHcCCCEEEEcCCcccCCCCCCHHHHHHHHHHcCCceEEEECCCCCCCcCCHHHHHHHHHHHHHHHHcCCC------
Confidence 3457899999999998 3343 3477888899999888764 45556666654
Q ss_pred CCEEEEEecHHHHhhhhHHHHHHhc
Q 026201 215 PLRIGVLAKNAILTAGFYQEKLQHE 239 (241)
Q Consensus 215 ~~rVGLLaT~~T~~s~~Y~~~L~~~ 239 (241)
.--+|+|-.++++....-++.++..
T Consensus 89 GvV~G~Lt~dg~iD~~~~~~Li~~a 113 (256)
T 1twd_A 89 GLVTGVLDVDGNVDMPRMEKIMAAA 113 (256)
T ss_dssp EEEECCBCTTSSBCHHHHHHHHHHH
T ss_pred EEEEeeECCCCCcCHHHHHHHHHHh
Confidence 4478999999988887777776543
No 322
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=26.49 E-value=97 Score=26.78 Aligned_cols=41 Identities=10% Similarity=0.117 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCcEEEEeCCc--------hhhhHHHHhccCCCCee
Q 026201 152 ENLRRKRVFLEKAGARCIVMPCHL--------SHIWHDEVCKGCSVPFL 192 (241)
Q Consensus 152 ~~l~~~~~~Le~~Gad~IvIaCNT--------AH~~~d~l~~~~~vPil 192 (241)
+...+.++..++.|||.+++...- .-.+|++|.+.+++||+
T Consensus 82 ~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a~~lPii 130 (292)
T 2vc6_A 82 AEAIAFVRHAQNAGADGVLIVSPYYNKPTQEGIYQHFKAIDAASTIPII 130 (292)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEE
No 323
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=26.41 E-value=1.1e+02 Score=24.84 Aligned_cols=54 Identities=11% Similarity=0.107 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHhCCcEEEEeCCch---------------hhhHHHHhccCCCCeeeccHHHHHHH
Q 026201 149 LIVENLRRKRVFLEKAGARCIVMPCHLS---------------HIWHDEVCKGCSVPFLHVSECVAKEL 202 (241)
Q Consensus 149 ~i~~~l~~~~~~Le~~Gad~IvIaCNTA---------------H~~~d~l~~~~~vPil~Iid~t~~~i 202 (241)
...+.+.+.++.+.+.|+..|++..... -.++.++.+..++|+|++-....+..
T Consensus 109 ~~~~~l~~~i~~~~~~g~~vil~tp~p~~~~~~~~~~~~~~~y~~~~~~vA~~~~v~~iD~~~~~~~~~ 177 (233)
T 1k7c_A 109 TFPAYLENAAKLFTAKGAKVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEVAGVEYVDHWSYVDSIY 177 (233)
T ss_dssp BHHHHHHHHHHHHHHTTCEEEEECCCCCCTTTTSSCCCCCCHHHHHHHHHHHHHTCEEECHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCEEEEECCCCccccCCCccccchHHHHHHHHHHHHHhCCeEEecHHHHHHHH
Confidence 4667778888888889999888743211 02346677777999999877665543
No 324
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=26.31 E-value=2e+02 Score=24.52 Aligned_cols=55 Identities=11% Similarity=-0.041 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCcEEEEe----CCchhhh---HHHHhccCC-CCe-ee------ccHHHHHHHHHhcCC
Q 026201 154 LRRKRVFLEKAGARCIVMP----CHLSHIW---HDEVCKGCS-VPF-LH------VSECVAKELKEANMK 208 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIa----CNTAH~~---~d~l~~~~~-vPi-l~------Iid~t~~~i~~~~~k 208 (241)
+.+.++.+++.|||.|.++ .-|...+ ++.+++.++ +|+ +| +..+-..+..+.|.+
T Consensus 157 ~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~ 226 (295)
T 1ydn_A 157 VASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLR 226 (295)
T ss_dssp HHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCC
Confidence 3445567889999999998 2223333 355666665 664 33 333333444455654
No 325
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=26.28 E-value=62 Score=28.76 Aligned_cols=71 Identities=20% Similarity=0.180 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH-------HH--HHHHHhcCCCCCCCCCCEEEEEec-
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-------VA--KELKEANMKPLEAGSPLRIGVLAK- 223 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~-------t~--~~i~~~~~k~~~~~~~~rVGLLaT- 223 (241)
+.+.++-|.+. +|+||+=.. .|-..+++.+..++||||-.+. .+ --+++...+ .++.+|+++|-
T Consensus 90 l~DTarvls~~-~D~iviR~~-~~~~~~~la~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~----l~gl~ia~vGD~ 163 (301)
T 2ef0_A 90 VRDVAKNLERF-VEGIAARVF-RHETVEALARHAKVPVVNALSDRAHPLQALADLLTLKEVFGG----LAGLEVAWVGDG 163 (301)
T ss_dssp HHHHHHHHTTT-CSEEEEECS-SHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHHSC----CTTCEEEEESCC
T ss_pred hHHHHHHHHHh-CCEEEEecC-ChHHHHHHHHHCCCCEEeCCCCccCchHHHHHHHHHHHHhCC----cCCcEEEEECCC
Confidence 44555688888 899999865 5777889999999999997542 11 113333211 24569999997
Q ss_pred HHHHhhh
Q 026201 224 NAILTAG 230 (241)
Q Consensus 224 ~~T~~s~ 230 (241)
..+..|-
T Consensus 164 ~rva~Sl 170 (301)
T 2ef0_A 164 NNVLNSL 170 (301)
T ss_dssp CHHHHHH
T ss_pred chhHHHH
Confidence 4444443
No 326
>4a18_G RPL30; ribosome, eukaryotic initiation factor 6, EIF6, transla large ribosomal subunit, rRNA; 3.52A {Tetrahymena thermophila} PDB: 4a19_G 4a1b_G 4a1d_G 4adx_6
Probab=26.25 E-value=69 Score=23.54 Aligned_cols=50 Identities=12% Similarity=0.139 Sum_probs=33.6
Q ss_pred HHHHHHHHHhCCcEEEEeCCchhhhHHHHhc---cCCCCeeeccHHHHHHHHHh
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSHIWHDEVCK---GCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~---~~~vPil~Iid~t~~~i~~~ 205 (241)
.+..+.+++..|.++++|.|.......++.. ..++|++..+. +-+++-..
T Consensus 28 ~~v~kai~~gkaklViiA~D~~~~~~~~i~~~c~~~~ip~~~~~~-s~~eLG~a 80 (104)
T 4a18_G 28 KSTIKAIRNGTAKLVFISNNCPTVRKSEIEYYASLAQISIHHFVG-SNVELGTA 80 (104)
T ss_dssp HHHHHHHHHTCCCEEEECTTSCHHHHHHHHHHHHHHTCEEEECSS-CHHHHHHH
T ss_pred HHHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCcEEEecC-CHHHHHHH
Confidence 3455678888899999999998765555543 45899986222 33445444
No 327
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=26.19 E-value=77 Score=28.73 Aligned_cols=39 Identities=13% Similarity=0.084 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I 194 (241)
+.+.++-|.+. +|+|||=.. .|...+++.+..++||++-
T Consensus 115 l~DTarvLs~~-~D~IviR~~-~~~~~~~la~~s~vPVING 153 (358)
T 4h31_A 115 MKDTARVLGRM-YDGIQYRGF-GQAIVEELGAFAGVPVWNG 153 (358)
T ss_dssp HHHHHHHHHHH-CSEEEEECS-CHHHHHHHHHHSSSCEEES
T ss_pred hhHHHHHhhcc-CceeEeccc-chhHHHHhhhhccCceECC
Confidence 44555688888 999999865 5777889999999999993
No 328
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=26.16 E-value=2.4e+02 Score=26.83 Aligned_cols=70 Identities=16% Similarity=0.125 Sum_probs=42.4
Q ss_pred HHHHHHHHHhCCcEEEEeCCc----------------hhhhHHHHhccCCCCeeeccH----HHHHHHHHhc-CCCCCCC
Q 026201 155 RRKRVFLEKAGARCIVMPCHL----------------SHIWHDEVCKGCSVPFLHVSE----CVAKELKEAN-MKPLEAG 213 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNT----------------AH~~~d~l~~~~~vPil~Iid----~t~~~i~~~~-~k~~~~~ 213 (241)
.+.++.|++.|+|+|-+-.-+ ...+..++++.+++|++.... ..++++.+.+ .+
T Consensus 231 ~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~aD----- 305 (671)
T 1ps9_A 231 VELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDAD----- 305 (671)
T ss_dssp HHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSCS-----
T ss_pred HHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCCC-----
Confidence 345678999999999873111 012457889999999997643 3445555544 32
Q ss_pred CCCEEEEEecHHHHhhhhHH
Q 026201 214 SPLRIGVLAKNAILTAGFYQ 233 (241)
Q Consensus 214 ~~~rVGLLaT~~T~~s~~Y~ 233 (241)
.--+|......-++..
T Consensus 306 ----~V~~gR~~l~~P~l~~ 321 (671)
T 1ps9_A 306 ----MVSMARPFLADAELLS 321 (671)
T ss_dssp ----EEEESTHHHHCTTHHH
T ss_pred ----EEEeCHHHHhCcHHHH
Confidence 3345665555544443
No 329
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=26.16 E-value=60 Score=29.60 Aligned_cols=66 Identities=8% Similarity=0.078 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH-------HH--HHHHHhc--CCCCCCCCCCEEEEEe
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-------VA--KELKEAN--MKPLEAGSPLRIGVLA 222 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~-------t~--~~i~~~~--~k~~~~~~~~rVGLLa 222 (241)
+.+.++.|.+. +|+|||=.. .|-..+++.+..++||||..+. .+ -.+++.. .+ ...+.+|+++|
T Consensus 86 l~DTarvLs~y-~D~IviR~~-~~~~~~~lA~~~~vPVINag~~~~HPtQaLaDl~TI~E~~~~G~---~l~glkva~vG 160 (355)
T 4a8p_A 86 IEDTSRVLSRL-VDILMARVE-RHHSIVDLANCATIPVINGMSDYNHPTQELGDLCTMVEHLPEGK---KLEDCKVVFVG 160 (355)
T ss_dssp HHHHHHHHTTT-CSEEEEECS-SHHHHHHHHHHCSSCEEECCCSSCCHHHHHHHHHHHHHTCCTTC---CGGGCEEEEES
T ss_pred HHHHHHHHHHh-CCEEEEecC-cHHHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhhcCC---CCCCCEEEEEC
Confidence 44455688888 999999865 4677788988999999998652 11 1234432 10 12356999998
Q ss_pred cH
Q 026201 223 KN 224 (241)
Q Consensus 223 T~ 224 (241)
--
T Consensus 161 D~ 162 (355)
T 4a8p_A 161 DA 162 (355)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 330
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=26.04 E-value=83 Score=27.37 Aligned_cols=62 Identities=16% Similarity=0.150 Sum_probs=39.4
Q ss_pred HHHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCee----------eccHHHHHHHHHhcCCCCCCCCCCE
Q 026201 156 RKRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFL----------HVSECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil----------~Iid~t~~~i~~~~~k~~~~~~~~r 217 (241)
+.++..++.|||.+++.+.-.. .+|++|.+.+++||+ +|-..++..+.+.. .+-
T Consensus 94 ~la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~--------pni 165 (301)
T 3m5v_A 94 GLAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDC--------ENI 165 (301)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHC--------TTE
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcC--------CCE
Confidence 3446788999999888764321 146778888888875 34445666666531 125
Q ss_pred EEEEecHH
Q 026201 218 IGVLAKNA 225 (241)
Q Consensus 218 VGLLaT~~ 225 (241)
||+==|.+
T Consensus 166 vgiKdssg 173 (301)
T 3m5v_A 166 YGVKEASG 173 (301)
T ss_dssp EEEEECSS
T ss_pred EEEEeCCC
Confidence 67765544
No 331
>2h31_A Multifunctional protein ADE2; alpha-beta-alpha, ligase, lyase; 2.80A {Homo sapiens}
Probab=25.98 E-value=2e+02 Score=26.87 Aligned_cols=85 Identities=14% Similarity=0.036 Sum_probs=46.3
Q ss_pred CeEEEEeCCChHHHHHHHHHHHHHhccC-CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHH
Q 026201 81 NTVGIVGGASVDSTLNLLGKLVQLSGEE-NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRV 159 (241)
Q Consensus 81 k~IGIIGGmGp~AT~~fy~kI~~~t~~d-~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~ 159 (241)
..+||| ||..|-....++.......= -..++-+.|--..| +. +.+.++
T Consensus 266 ~~V~Ii--~gs~SD~~~~~~a~~~l~~~gi~~~v~V~saHR~p-------------------------~~----~~~~~~ 314 (425)
T 2h31_A 266 CRVVVL--MGSTSDLGHCEKIKKACGNFGIPCELRVTSAHKGP-------------------------DE----TLRIKA 314 (425)
T ss_dssp CEEEEE--ESCGGGHHHHHHHHHHHHHTTCCEEEEECCTTTCH-------------------------HH----HHHHHH
T ss_pred CeEEEE--ecCcccHHHHHHHHHHHHHcCCceEEeeeeccCCH-------------------------HH----HHHHHH
Confidence 468888 66666677777776655432 12334444411111 22 333445
Q ss_pred HHHHhCCc-EEEEeCCchhhhHHHHhccCCCCeeeccH
Q 026201 160 FLEKAGAR-CIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196 (241)
Q Consensus 160 ~Le~~Gad-~IvIaCNTAH~~~d~l~~~~~vPil~Iid 196 (241)
..+..|+. +|+....-+-..---+...+..|+|++.-
T Consensus 315 ~~~~~g~~~viIa~AG~~a~Lpgvva~~t~~PVIgvP~ 352 (425)
T 2h31_A 315 EYEGDGIPTVFVAVAGRSNGLGPVMSGNTAYPVISCPP 352 (425)
T ss_dssp HHHTTCCCEEEEEECCSSCCHHHHHHHHCSSCEEECCC
T ss_pred HHHHCCCCeEEEEEcCcccchHhHHhccCCCCEEEeeC
Confidence 67788995 43333333222335566678888888754
No 332
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=25.95 E-value=79 Score=27.91 Aligned_cols=61 Identities=20% Similarity=0.160 Sum_probs=37.2
Q ss_pred HHHHHHHHhCCcEEEEe------CCch-----------hhhHHHHhccCCCCeee---c--cHHHHHHHHHhcCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMP------CHLS-----------HIWHDEVCKGCSVPFLH---V--SECVAKELKEANMKPLEAG 213 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIa------CNTA-----------H~~~d~l~~~~~vPil~---I--id~t~~~i~~~~~k~~~~~ 213 (241)
+.++.++++|||+|++- |.|. -..+.++++.+++||+- | .+.+++++ ..|.+
T Consensus 161 e~A~~a~~aGad~Ivvs~hgG~~~~~~~~~~~g~~g~~~~~l~~v~~~~~ipVIa~GGI~~g~Dv~kal-alGAd----- 234 (336)
T 1ypf_A 161 EAVRELENAGADATKVGIGPGKVCITKIKTGFGTGGWQLAALRWCAKAASKPIIADGGIRTNGDVAKSI-RFGAT----- 234 (336)
T ss_dssp HHHHHHHHHTCSEEEECSSCSTTCHHHHHHSCSSTTCHHHHHHHHHHTCSSCEEEESCCCSTHHHHHHH-HTTCS-----
T ss_pred HHHHHHHHcCCCEEEEecCCCceeecccccCcCCchhHHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHH-HcCCC-----
Confidence 45678899999999992 1111 11246677778999885 2 23344444 45653
Q ss_pred CCCEEEEEecHHH
Q 026201 214 SPLRIGVLAKNAI 226 (241)
Q Consensus 214 ~~~rVGLLaT~~T 226 (241)
...+||...
T Consensus 235 ----aV~iGr~~l 243 (336)
T 1ypf_A 235 ----MVMIGSLFA 243 (336)
T ss_dssp ----EEEESGGGT
T ss_pred ----EEEeChhhh
Confidence 556666654
No 333
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=25.92 E-value=79 Score=27.82 Aligned_cols=34 Identities=15% Similarity=-0.079 Sum_probs=26.3
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+. +++|.+.|+|-|++.+.|--.+
T Consensus 39 dg~iD~~~l~~l----v~~li~~Gv~Gi~v~GtTGE~~ 72 (315)
T 3na8_A 39 DGGLDLPALGRS----IERLIDGGVHAIAPLGSTGEGA 72 (315)
T ss_dssp TSSBCHHHHHHH----HHHHHHTTCSEEECSSGGGTGG
T ss_pred CCCcCHHHHHHH----HHHHHHcCCCEEEECccccChh
Confidence 456777776554 4689999999999999887764
No 334
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=25.87 E-value=63 Score=28.87 Aligned_cols=71 Identities=13% Similarity=0.113 Sum_probs=47.2
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH-------HH--HHHHHhcCCCCCCCCCCEEEEEec-
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-------VA--KELKEANMKPLEAGSPLRIGVLAK- 223 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~-------t~--~~i~~~~~k~~~~~~~~rVGLLaT- 223 (241)
+.+.++-|.+. +|+||+=.. .|-..+++.+..++||||-.+. .+ --+++...+ .++.+|+++|-
T Consensus 91 l~DTarvls~~-~D~iviR~~-~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~----l~gl~va~vGD~ 164 (315)
T 1pvv_A 91 IADTARVLSRY-VDAIMARVY-DHKDVEDLAKYATVPVINGLSDFSHPCQALADYMTIWEKKGT----IKGVKVVYVGDG 164 (315)
T ss_dssp HHHHHHHHTTT-CSEEEEECS-SHHHHHHHHHHCSSCEEEEECSSCCHHHHHHHHHHHHHHHSC----CTTCEEEEESCC
T ss_pred HHHHHHHHHHh-CcEEEEecC-chHHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHHHHhCC----cCCcEEEEECCC
Confidence 44455678888 899999875 5777899999999999997652 11 113333211 24569999997
Q ss_pred HHHHhhh
Q 026201 224 NAILTAG 230 (241)
Q Consensus 224 ~~T~~s~ 230 (241)
..+..|-
T Consensus 165 ~rva~Sl 171 (315)
T 1pvv_A 165 NNVAHSL 171 (315)
T ss_dssp CHHHHHH
T ss_pred cchHHHH
Confidence 4444443
No 335
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=25.86 E-value=2.1e+02 Score=24.94 Aligned_cols=102 Identities=8% Similarity=-0.033 Sum_probs=51.9
Q ss_pred cCCeEEEEe-CCChHHHHHHHHHHHHHhccC---CCCCEEEecC-ccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHH
Q 026201 79 QANTVGIVG-GASVDSTLNLLGKLVQLSGEE---NDFPFLLCSD-PLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVEN 153 (241)
Q Consensus 79 ~~k~IGIIG-GmGp~AT~~fy~kI~~~t~~d---~~~~~vi~S~-p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~ 153 (241)
++++|+|+. |-|. .++.|.+..+.. -.+..|+.|+ +.+...-..++. |+-.. .....+.++--
T Consensus 88 ~~~ri~vl~Sg~g~-----nl~~ll~~~~~g~l~~~i~~Visn~p~~~~~~A~~~gI-p~~~~----~~~~~~r~~~~-- 155 (288)
T 3obi_A 88 TRRKVMLLVSQSDH-----CLADILYRWRVGDLHMIPTAIVSNHPRETFSGFDFGDI-PFYHF----PVNKDTRRQQE-- 155 (288)
T ss_dssp SCEEEEEEECSCCH-----HHHHHHHHHHTTSSCEEEEEEEESSCGGGSCCTTTTTC-CEEEC----CCCTTTHHHHH--
T ss_pred CCcEEEEEEcCCCC-----CHHHHHHHHHCCCCCeEEEEEEcCCChhHHHHHHHcCC-CEEEe----CCCcccHHHHH--
Confidence 356788885 7664 355555555543 3467777777 544221111111 11100 00111222211
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeec
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~I 194 (241)
.+..+.|++.++|+||++-. .+..-+++-+...-.+|||
T Consensus 156 -~~~~~~l~~~~~Dlivlagy-~~il~~~~l~~~~~~~iNi 194 (288)
T 3obi_A 156 -AAITALIAQTHTDLVVLARY-MQILSDEMSARLAGRCINI 194 (288)
T ss_dssp -HHHHHHHHHHTCCEEEESSC-CSCCCHHHHHHTTTSEEEE
T ss_pred -HHHHHHHHhcCCCEEEhhhh-hhhCCHHHHhhhcCCeEEe
Confidence 23346788999999999854 3333355555555455655
No 336
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=25.82 E-value=2.9e+02 Score=23.11 Aligned_cols=37 Identities=16% Similarity=0.132 Sum_probs=26.6
Q ss_pred HHHHHhCCcEEEEeCCchhh--hHHHHhc-cCCCCeeecc
Q 026201 159 VFLEKAGARCIVMPCHLSHI--WHDEVCK-GCSVPFLHVS 195 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNTAH~--~~d~l~~-~~~vPil~Ii 195 (241)
..+.+.++|+|+++++.... ++.++++ ..++|++..-
T Consensus 190 ~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~i~~~ 229 (364)
T 3lop_A 190 DKLLAADVQAIFLGATAEPAAQFVRQYRARGGEAQLLGLS 229 (364)
T ss_dssp HHHHHSCCSEEEEESCHHHHHHHHHHHHHTTCCCEEEECT
T ss_pred HHHHhCCCCEEEEecCcHHHHHHHHHHHHcCCCCeEEEec
Confidence 45677899999999876544 4566665 4788988753
No 337
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=25.75 E-value=51 Score=23.28 Aligned_cols=49 Identities=14% Similarity=0.179 Sum_probs=34.7
Q ss_pred HHHHHHHHHhCCcEEEEeCCchhhhH---HHHhccCCCCeeeccHHHHHHHHHh
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSHIWH---DEVCKGCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH~~~---d~l~~~~~vPil~Iid~t~~~i~~~ 205 (241)
.+..+.+++..+.+++||.|...-.. ..+.+..++|++.+- +-+++-+.
T Consensus 17 ~~v~kai~~gkaklViiA~D~~~~~~~~i~~lc~~~~Ip~~~v~--sk~eLG~a 68 (82)
T 3v7e_A 17 KQTVKALKRGSVKEVVVAKDADPILTSSVVSLAEDQGISVSMVE--SMKKLGKA 68 (82)
T ss_dssp HHHHHHHTTTCEEEEEEETTSCHHHHHHHHHHHHHHTCCEEEES--CHHHHHHH
T ss_pred HHHHHHHHcCCeeEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEC--CHHHHHHH
Confidence 34456778888999999999887544 445566789999864 44555544
No 338
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=25.70 E-value=1.9e+02 Score=27.13 Aligned_cols=56 Identities=13% Similarity=0.062 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHhCCcEEEEe----CCchhhhH---HHHhccCCCCe-------eeccHHHHHHHHHhcCC
Q 026201 153 NLRRKRVFLEKAGARCIVMP----CHLSHIWH---DEVCKGCSVPF-------LHVSECVAKELKEANMK 208 (241)
Q Consensus 153 ~l~~~~~~Le~~Gad~IvIa----CNTAH~~~---d~l~~~~~vPi-------l~Iid~t~~~i~~~~~k 208 (241)
++.+.++.++++|||.|.|+ .-|.+.+. ..+++.+++|| .++.-+..-++.++|.+
T Consensus 159 ~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~AGa~ 228 (464)
T 2nx9_A 159 TWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAIEAGVD 228 (464)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHHHhCCC
Confidence 44556678889999999997 44455443 56667777774 23333444444556654
No 339
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=25.66 E-value=2.7e+02 Score=23.66 Aligned_cols=26 Identities=12% Similarity=0.009 Sum_probs=16.8
Q ss_pred HHHhCCcEEEEeCCch-hhh--HHHHhcc
Q 026201 161 LEKAGARCIVMPCHLS-HIW--HDEVCKG 186 (241)
Q Consensus 161 Le~~Gad~IvIaCNTA-H~~--~d~l~~~ 186 (241)
|++..+|+|+|++.+. |.- ...++..
T Consensus 62 l~~~~~D~V~i~tp~~~h~~~~~~al~aG 90 (336)
T 2p2s_A 62 ITDASIDLIACAVIPCDRAELALRTLDAG 90 (336)
T ss_dssp HTCTTCCEEEECSCGGGHHHHHHHHHHTT
T ss_pred hhCCCCCEEEEeCChhhHHHHHHHHHHCC
Confidence 4566899999998643 542 2445554
No 340
>2yv4_A Hypothetical protein PH0435; alpha and beta proteins (A+B), SUA5 domain, structural genom NPPSFA; 2.00A {Pyrococcus horikoshii}
Probab=25.65 E-value=1.2e+02 Score=22.37 Aligned_cols=44 Identities=14% Similarity=0.178 Sum_probs=28.7
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchh----hhHHHHhccCC
Q 026201 145 LDDSLIVENLRRKRVFLEKAGARCIVMPCHLSH----IWHDEVCKGCS 188 (241)
Q Consensus 145 ~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH----~~~d~l~~~~~ 188 (241)
.|.+++...|-...+.|.+.|+|.|++..---+ +..|+|++...
T Consensus 52 ~~~~~~A~~Lf~~LR~~D~~~~~~I~~e~~p~~g~g~Ai~nRL~kAA~ 99 (105)
T 2yv4_A 52 SSVEEVAKNLFKALRYMDKAGVDVVIAEGVEERGLGLAVMNRLRKASG 99 (105)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCSEEEEEEESGGGHHHHHHHHC---CC
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCEEEEeCCCCcChHHHHHHHHHHhcC
Confidence 455666677777788999999999988765433 23466666544
No 341
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=25.52 E-value=86 Score=27.48 Aligned_cols=34 Identities=18% Similarity=0.137 Sum_probs=26.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+. +++|.+.|+|-|++.+.|--.+
T Consensus 23 dg~iD~~~l~~l----v~~li~~Gv~Gl~v~GtTGE~~ 56 (313)
T 3dz1_A 23 DGKIDDVSIDRL----TDFYAEVGCEGVTVLGILGEAP 56 (313)
T ss_dssp TSCBCHHHHHHH----HHHHHHTTCSEEEESTGGGTGG
T ss_pred CCCcCHHHHHHH----HHHHHHCCCCEEEeCccCcChh
Confidence 456677776554 4689999999999999887654
No 342
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=25.46 E-value=99 Score=27.17 Aligned_cols=34 Identities=18% Similarity=0.040 Sum_probs=26.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+. +++|.+.|+|-|++.+.|--.+
T Consensus 38 dg~iD~~~l~~l----v~~li~~Gv~Gl~v~GtTGE~~ 71 (314)
T 3qze_A 38 QGRLDWDSLAKL----VDFHLQEGTNAIVAVGTTGESA 71 (314)
T ss_dssp TSCBCHHHHHHH----HHHHHHHTCCEEEESSGGGTGG
T ss_pred CCCcCHHHHHHH----HHHHHHcCCCEEEECccccChh
Confidence 456677776554 4689999999999999887754
No 343
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=25.45 E-value=51 Score=29.83 Aligned_cols=73 Identities=7% Similarity=-0.174 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchh---------hhHHHHhccCCCCeeeccH---HHHHHHHHhc-CCCCCCCCCCEEEE
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSH---------IWHDEVCKGCSVPFLHVSE---CVAKELKEAN-MKPLEAGSPLRIGV 220 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH---------~~~d~l~~~~~vPil~Iid---~t~~~i~~~~-~k~~~~~~~~rVGL 220 (241)
..+.++.|++.|+|+|-+..-+.. .+..++++.+++|++.... ..++++.+.+ . -.--
T Consensus 258 ~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~l~~g~a---------D~V~ 328 (376)
T 1icp_A 258 GLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRALIEDRA---------DLVA 328 (376)
T ss_dssp HHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHHHHTTSC---------SEEE
T ss_pred HHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHCCCC---------cEEe
Confidence 345668899999999999765421 1347889999999875433 2334444433 2 2444
Q ss_pred EecHHHHhhhhHHHH
Q 026201 221 LAKNAILTAGFYQEK 235 (241)
Q Consensus 221 LaT~~T~~s~~Y~~~ 235 (241)
+|......-.+..+.
T Consensus 329 ~gR~~l~~P~l~~k~ 343 (376)
T 1icp_A 329 YGRLFISNPDLPKRF 343 (376)
T ss_dssp ESHHHHHCTTHHHHH
T ss_pred ecHHHHhCccHHHHH
Confidence 566555444444443
No 344
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=25.39 E-value=75 Score=27.93 Aligned_cols=36 Identities=11% Similarity=0.220 Sum_probs=25.7
Q ss_pred HHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCee
Q 026201 157 KRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFL 192 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil 192 (241)
.++..++.|||.+++...-.. .+|++|.+.+++||+
T Consensus 98 la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 141 (314)
T 3d0c_A 98 LGKSAIDSGADCVMIHQPVHPYITDAGAVEYYRNIIEALDAPSI 141 (314)
T ss_dssp HHHHHHHTTCSEEEECCCCCSCCCHHHHHHHHHHHHHHSSSCEE
T ss_pred HHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 445678999999888765321 245778888888864
No 345
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=25.31 E-value=67 Score=28.45 Aligned_cols=71 Identities=13% Similarity=0.078 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccH--------HHH--HHHHHhcCCCCCCCCCCEEEEEec
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE--------CVA--KELKEANMKPLEAGSPLRIGVLAK 223 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid--------~t~--~~i~~~~~k~~~~~~~~rVGLLaT 223 (241)
+.+.++-|.+. +|+|+|=.. .|-..+++.+..++||||-.+ +.+ --+++...+ .++.+|+++|-
T Consensus 84 l~DTarvls~~-~D~iviR~~-~~~~~~~la~~~~vPVINaG~g~~~HPtQ~LaDl~Ti~e~~g~----l~gl~va~vGD 157 (299)
T 1pg5_A 84 LADTIRMLNNY-SDGIVMRHK-YDGASRFASEISDIPVINAGDGKHEHPTQAVIDIYTINKHFNT----IDGLVFALLGD 157 (299)
T ss_dssp HHHHHHHHHHH-CSEEEEEES-SBTHHHHHHHHCSSCEEEEEETTTBCHHHHHHHHHHHHHHHSC----STTCEEEEEEC
T ss_pred HHHHHHHHHHh-CCEEEEeCC-ChhHHHHHHHhCCCCEEeCCCCCCcCcHHHHHHHHHHHHHhCC----cCCcEEEEECC
Confidence 45556788888 899999865 467788899899999999744 111 123333211 24569999997
Q ss_pred ---HHHHhhh
Q 026201 224 ---NAILTAG 230 (241)
Q Consensus 224 ---~~T~~s~ 230 (241)
..+..|-
T Consensus 158 ~~~~rva~Sl 167 (299)
T 1pg5_A 158 LKYARTVNSL 167 (299)
T ss_dssp CSSCHHHHHH
T ss_pred CCCCchHHHH
Confidence 3555443
No 346
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=25.30 E-value=1.1e+02 Score=26.47 Aligned_cols=21 Identities=19% Similarity=0.197 Sum_probs=14.8
Q ss_pred eEEEEeCCChHHHHHHHHHHHH
Q 026201 82 TVGIVGGASVDSTLNLLGKLVQ 103 (241)
Q Consensus 82 ~IGIIGGmGp~AT~~fy~kI~~ 103 (241)
+|||| |.|..+...+++.+.+
T Consensus 27 rvgii-G~G~ig~~~~~~~l~~ 47 (330)
T 4ew6_A 27 NLAIV-GVGKIVRDQHLPSIAK 47 (330)
T ss_dssp EEEEE-CCSHHHHHTHHHHHHH
T ss_pred eEEEE-ecCHHHHHHHHHHHHh
Confidence 79999 6788776556666643
No 347
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=25.22 E-value=82 Score=27.77 Aligned_cols=41 Identities=20% Similarity=0.276 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCcEEEEeCCchhh--------hHHHHhccCCCCee
Q 026201 152 ENLRRKRVFLEKAGARCIVMPCHLSHI--------WHDEVCKGCSVPFL 192 (241)
Q Consensus 152 ~~l~~~~~~Le~~Gad~IvIaCNTAH~--------~~d~l~~~~~vPil 192 (241)
+...+.++..++.|||.+++...-... +|..|.+.+++||+
T Consensus 104 ~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPii 152 (315)
T 3si9_A 104 SEAVELAKHAEKAGADAVLVVTPYYNRPNQRGLYTHFSSIAKAISIPII 152 (315)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHcCCCCEE
No 348
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=25.16 E-value=84 Score=28.33 Aligned_cols=73 Identities=15% Similarity=0.134 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH-------HHH--HHHHhcCCCCCCCCCCEEEEEec-
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-------VAK--ELKEANMKPLEAGSPLRIGVLAK- 223 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~-------t~~--~i~~~~~k~~~~~~~~rVGLLaT- 223 (241)
+.+.++-|.+. +|+|++=.. .|...+++.+..++||||-.+. .+. -+++...+ ..++.+|+++|-
T Consensus 90 l~DTarvLs~~-~D~IviR~~-~~~~~~~lA~~s~vPVINa~~~~~HPtQ~LaDl~Ti~e~~g~---~l~gl~va~vGD~ 164 (335)
T 1dxh_A 90 MKDTARVLGRM-YDAIEYRGF-KQEIVEELAKFAGVPVFNGLTDEYHPTQMLADVLTMREHSDK---PLHDISYAYLGDA 164 (335)
T ss_dssp HHHHHHHHHHH-CSEEEEECS-CHHHHHHHHHHSSSCEEEEECSSCCHHHHHHHHHHHHHTCSS---CGGGCEEEEESCC
T ss_pred HHHHHHHHHhh-CCEEEEecC-ChhHHHHHHHhCCCCEEcCCCCCCCcHHHHHHHHHHHHHcCC---CcCCeEEEEecCC
Confidence 34455688888 799999875 5777899999999999997542 111 23443210 123569999997
Q ss_pred -HHHHhhhh
Q 026201 224 -NAILTAGF 231 (241)
Q Consensus 224 -~~T~~s~~ 231 (241)
..+..|-+
T Consensus 165 ~~~va~Sl~ 173 (335)
T 1dxh_A 165 RNNMGNSLL 173 (335)
T ss_dssp SSHHHHHHH
T ss_pred ccchHHHHH
Confidence 35555443
No 349
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=25.12 E-value=1.1e+02 Score=26.68 Aligned_cols=21 Identities=38% Similarity=0.518 Sum_probs=15.1
Q ss_pred CeEEEEeCCChHHHHHHHHHHH
Q 026201 81 NTVGIVGGASVDSTLNLLGKLV 102 (241)
Q Consensus 81 k~IGIIGGmGp~AT~~fy~kI~ 102 (241)
.+|||| |.|..+...+.+.|.
T Consensus 6 ~rigiI-G~G~~g~~~~~~~l~ 26 (359)
T 3m2t_A 6 IKVGLV-GIGAQMQENLLPSLL 26 (359)
T ss_dssp EEEEEE-CCSHHHHHTHHHHHH
T ss_pred ceEEEE-CCCHHHHHHHHHHHH
Confidence 479999 788877655666653
No 350
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=25.12 E-value=2.2e+02 Score=24.76 Aligned_cols=62 Identities=8% Similarity=0.074 Sum_probs=37.6
Q ss_pred HHHHHHHHhCCcEEEEeCCch------h-----hhHHHHhccCCCCee--e-------ccHHHHHHHHHhcCCCCCCCCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLS------H-----IWHDEVCKGCSVPFL--H-------VSECVAKELKEANMKPLEAGSP 215 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTA------H-----~~~d~l~~~~~vPil--~-------Iid~t~~~i~~~~~k~~~~~~~ 215 (241)
+.++..++.|||.+++...-. . .+|..|.+.+++||+ | |-.+++..+.+.. .
T Consensus 94 ~la~~A~~~Gadavlv~~Pyy~~~~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~~~~~~~La~~~--------p 165 (309)
T 3fkr_A 94 ARSLRAQQLGAAMVMAMPPYHGATFRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLARMAREI--------E 165 (309)
T ss_dssp HHHHHHHHTTCSEEEECCSCBTTTBCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCHHHHHHHHHHS--------T
T ss_pred HHHHHHHHcCCCEEEEcCCCCccCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCCHHHHHHHHhhC--------C
Confidence 344677899999888765321 1 145778888888864 3 3345666665421 1
Q ss_pred CEEEEE-ecHH
Q 026201 216 LRIGVL-AKNA 225 (241)
Q Consensus 216 ~rVGLL-aT~~ 225 (241)
+-||+= .+.+
T Consensus 166 nIvgiK~~~~~ 176 (309)
T 3fkr_A 166 QVAYFXIETPG 176 (309)
T ss_dssp TEEEEEECSSS
T ss_pred CEEEEECCCcc
Confidence 267877 4433
No 351
>3ouz_A Biotin carboxylase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta fold, cytosol, LIG; HET: MSE ADP SRT TLA; 1.90A {Campylobacter jejuni subsp} PDB: 3ouu_A*
Probab=25.12 E-value=2.2e+02 Score=25.44 Aligned_cols=34 Identities=15% Similarity=0.143 Sum_probs=17.6
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhccCCCCCEEEecCc
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGEENDFPFLLCSDP 119 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p 119 (241)
||+|.|+|| |. .+..+.+.. .+...--+++++++
T Consensus 6 ~~kiLI~g~-g~-~a~~i~~aa----~~~G~~~v~v~~~~ 39 (446)
T 3ouz_A 6 IKSILIANR-GE-IALRALRTI----KEMGKKAICVYSEA 39 (446)
T ss_dssp CCEEEECCC-HH-HHHHHHHHH----HHTTCEEEEEEEGG
T ss_pred cceEEEECC-CH-HHHHHHHHH----HHcCCEEEEEEcCc
Confidence 789999973 33 344333333 22223334555544
No 352
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=25.09 E-value=88 Score=27.30 Aligned_cols=34 Identities=12% Similarity=0.119 Sum_probs=26.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+.+ ++|.+.|+|-|++.+.|--.+
T Consensus 26 dg~iD~~~l~~lv----~~li~~Gv~Gl~v~GtTGE~~ 59 (303)
T 2wkj_A 26 QQALDKASLRRLV----QFNIQQGIDGLYVGGSTGEAF 59 (303)
T ss_dssp TSSBCHHHHHHHH----HHHHHTTCSEEEESSTTTTGG
T ss_pred CCCcCHHHHHHHH----HHHHHcCCCEEEECeeccChh
Confidence 4567877765544 689999999999999887664
No 353
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=25.08 E-value=83 Score=27.69 Aligned_cols=61 Identities=13% Similarity=0.205 Sum_probs=37.8
Q ss_pred HHHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCee--ec--------cHHHHHHHHHhcCCCCCCCCCCE
Q 026201 156 RKRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFL--HV--------SECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil--~I--------id~t~~~i~~~~~k~~~~~~~~r 217 (241)
+.++..++.|||.+++...-.. .+|++|.+.+++||+ |+ -..++..+.+. .+-
T Consensus 109 ~la~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~---------pnI 179 (314)
T 3qze_A 109 ALTEAAKSGGADACLLVTPYYNKPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKV---------PNI 179 (314)
T ss_dssp HHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTS---------TTE
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcC---------CCE
Confidence 3446788999998888764221 246788888888863 43 33455555531 226
Q ss_pred EEEEecHH
Q 026201 218 IGVLAKNA 225 (241)
Q Consensus 218 VGLLaT~~ 225 (241)
||+==|.+
T Consensus 180 vgiKdssg 187 (314)
T 3qze_A 180 IGIKEATG 187 (314)
T ss_dssp EEEEECSC
T ss_pred EEEEcCCC
Confidence 77765544
No 354
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=25.07 E-value=1.2e+02 Score=28.56 Aligned_cols=77 Identities=13% Similarity=0.041 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHHhCCcEE-EEeCCchhhhHHHHhccCCCCeeeccHHHHHH-HHHhcCCCCCCCCCCEEEEEecHHHHhh
Q 026201 152 ENLRRKRVFLEKAGARCI-VMPCHLSHIWHDEVCKGCSVPFLHVSECVAKE-LKEANMKPLEAGSPLRIGVLAKNAILTA 229 (241)
Q Consensus 152 ~~l~~~~~~Le~~Gad~I-vIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~-i~~~~~k~~~~~~~~rVGLLaT~~T~~s 229 (241)
....-.++.|++.|++.| .+|-...-.++|.+.+.-++.++....+-... +..-..| ..++...+++|.|+=..
T Consensus 12 ~~a~~lv~~L~~~GV~~vFg~PG~~~~~l~dal~~~~~i~~i~~~hE~~Aa~aAdGyAr----~tG~pgv~~~TsGpG~~ 87 (578)
T 3lq1_A 12 DYLAAFIEELVQAGVKEAIISPGSRSTPLALMMAEHPILKIYVDVDERSAGFFALGLAK----ASKRPVVLLCTSGTAAA 87 (578)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCCTTTHHHHHHHHHCSSCEEEECSSHHHHHHHHHHHHH----HHCCCEEEEECSSHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCccHHHHHHHHhCCCceEEEecCcHHHHHHHHHHHH----hhCCCEEEEECCchhhh
Confidence 334445688999999855 45666656778998876578777766654333 2221111 11224567778776544
Q ss_pred hhH
Q 026201 230 GFY 232 (241)
Q Consensus 230 ~~Y 232 (241)
..+
T Consensus 88 N~~ 90 (578)
T 3lq1_A 88 NYF 90 (578)
T ss_dssp TTH
T ss_pred hhh
Confidence 433
No 355
>3qel_B Glutamate [NMDA] receptor subunit epsilon-2; ION channel, allosteric modulation, phenylethanolamine, N-glycosylation, extracellular; HET: NAG BMA MAN FUC QEL; 2.60A {Rattus norvegicus} PDB: 3qem_B* 3jpw_A* 3jpy_A*
Probab=24.99 E-value=1.8e+02 Score=25.42 Aligned_cols=41 Identities=12% Similarity=0.088 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhCCcEEEE-eCCch---hhhHHHHhccCCCCeeec
Q 026201 154 LRRKRVFLEKAGARCIVM-PCHLS---HIWHDEVCKGCSVPFLHV 194 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvI-aCNTA---H~~~d~l~~~~~vPil~I 194 (241)
+...++.|...|+..|+. ++... ..+...+....++|+|+.
T Consensus 52 ~~~~C~~l~~~~V~aiIgg~~s~~~a~a~~v~~i~~~~~iP~IS~ 96 (364)
T 3qel_B 52 ITRICDLMSDRKIQGVVFADDTDQEAIAQILDFISAQTLTPILGI 96 (364)
T ss_dssp HHHHHHHHHHSCEEEEEEEESSCCTHHHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhCCeEEEEecCCCCchHHHHHHHHHHhccCCCEEEe
Confidence 455667788788988775 44322 112466666667777753
No 356
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=24.96 E-value=2.3e+02 Score=26.08 Aligned_cols=53 Identities=19% Similarity=0.175 Sum_probs=34.7
Q ss_pred HHHHHHHHhCCcEEEEeCCchhh-----hHHHHhccC-CCCee---eccHHHHHHHHHhcCC
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHI-----WHDEVCKGC-SVPFL---HVSECVAKELKEANMK 208 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~-----~~d~l~~~~-~vPil---~Iid~t~~~i~~~~~k 208 (241)
+.+++|.++|+|+|++.++--+. ..+++++.+ ++|++ ..-...++.+.+.|.+
T Consensus 240 ~~a~~l~~aGvd~v~i~~~~G~~~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d 301 (494)
T 1vrd_A 240 ERVEKLVKAGVDVIVIDTAHGHSRRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGAD 301 (494)
T ss_dssp HHHHHHHHTTCSEEEECCSCCSSHHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCS
T ss_pred HHHHHHHHhCCCEEEEEecCCchHHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCC
Confidence 45678889999999996653232 246777777 68875 1222345667777765
No 357
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=24.90 E-value=96 Score=26.77 Aligned_cols=34 Identities=12% Similarity=-0.037 Sum_probs=26.0
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+. +++|.+.|+|-|++.+.|--.+
T Consensus 16 dg~iD~~~l~~l----v~~li~~Gv~gl~~~GttGE~~ 49 (291)
T 3tak_A 16 DGGVDWKSLEKL----VEWHIEQGTNSIVAVGTTGEAS 49 (291)
T ss_dssp TSCBCHHHHHHH----HHHHHHHTCCEEEESSTTTTGG
T ss_pred CCCcCHHHHHHH----HHHHHHCCCCEEEECccccccc
Confidence 456677776554 4689999999999999987653
No 358
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=24.82 E-value=75 Score=27.72 Aligned_cols=61 Identities=16% Similarity=0.188 Sum_probs=38.1
Q ss_pred HHHHHHHHhCCcEEEEeCCchhh--------hHHHHhccCCCCee--e--------ccHHHHHHHHHhcCCCCCCCCCCE
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHI--------WHDEVCKGCSVPFL--H--------VSECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~--------~~d~l~~~~~vPil--~--------Iid~t~~~i~~~~~k~~~~~~~~r 217 (241)
+.++..++.|||.+++...-... +|++|.+.+++||+ | |-..++..+.+. .+-
T Consensus 90 ~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~---------pnI 160 (300)
T 3eb2_A 90 AQAKLYEKLGADGILAILEAYFPLKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEH---------PRI 160 (300)
T ss_dssp HHHHHHHHHTCSEEEEEECCSSCCCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHTS---------TTE
T ss_pred HHHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHHcC---------CCE
Confidence 34467789999988876543221 46788888888863 3 334566666431 226
Q ss_pred EEEEecHH
Q 026201 218 IGVLAKNA 225 (241)
Q Consensus 218 VGLLaT~~ 225 (241)
||+==|.+
T Consensus 161 vgiKdssg 168 (300)
T 3eb2_A 161 RYIKDAST 168 (300)
T ss_dssp EEEEECSS
T ss_pred EEEEcCCC
Confidence 77766654
No 359
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=24.81 E-value=2.6e+02 Score=24.87 Aligned_cols=94 Identities=10% Similarity=0.131 Sum_probs=55.1
Q ss_pred ChHHHHHHHHHHHHHhccC--CCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhCCc
Q 026201 90 SVDSTLNLLGKLVQLSGEE--NDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGAR 167 (241)
Q Consensus 90 Gp~AT~~fy~kI~~~t~~d--~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~Le~~Gad 167 (241)
+.+--..|...|++.+++. +..++.+=-.|. ++.+ ...+.++ ..+.++.|++. +|
T Consensus 188 slenR~rf~~eiv~aVr~avg~d~pv~vRls~~----------~~~~--------~g~~~~~----~~~~a~~l~~~-vd 244 (343)
T 3kru_A 188 SIENRARFLIEVIDEVRKNWPENKPIFVRVSAD----------DYME--------GGINIDM----MVEYINMIKDK-VD 244 (343)
T ss_dssp SHHHHTHHHHHHHHHHHHTSCTTSCEEEEEECC----------CSST--------TSCCHHH----HHHHHHHHTTT-CS
T ss_pred chHhHHHHHHHHHHHHHhcCCccCCeEEEeech----------hhhc--------cCccHHH----HHHHHHHhhcc-cc
Confidence 5666778888888888865 455555421110 1000 0112222 34456789999 99
Q ss_pred EEEEeCCch------------hhhHHHHhccCCCCeeeccH----HHHHHHHHhc
Q 026201 168 CIVMPCHLS------------HIWHDEVCKGCSVPFLHVSE----CVAKELKEAN 206 (241)
Q Consensus 168 ~IvIaCNTA------------H~~~d~l~~~~~vPil~Iid----~t~~~i~~~~ 206 (241)
+|-+..... -.+..++++.+++|++.... ..++++.+.|
T Consensus 245 ~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G 299 (343)
T 3kru_A 245 LIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNE 299 (343)
T ss_dssp EEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTT
T ss_pred EEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhch
Confidence 999953211 12357788888999987543 3455555544
No 360
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=24.76 E-value=86 Score=28.62 Aligned_cols=72 Identities=13% Similarity=0.045 Sum_probs=48.0
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH-------HH--HHHHHhcCCCCCCCCCCEEEEEecH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-------VA--KELKEANMKPLEAGSPLRIGVLAKN 224 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~-------t~--~~i~~~~~k~~~~~~~~rVGLLaT~ 224 (241)
+.+.++-|.+. +|+|++=.. .|...+++.+..++||||-.+. .+ --+++...+ .++.+|+++|--
T Consensus 112 l~DTarvLs~~-~D~IviR~~-~~~~~~~lA~~s~vPVINa~~~~~HPtQaLaDl~Ti~E~~g~----l~gl~va~vGD~ 185 (359)
T 2w37_A 112 TSDTAKVLGSM-FDGIEFRGF-KQSDAEILARDSGVPVWNGLTDEWHPTQMLADFMTVKENFGK----LQGLTLTFMGDG 185 (359)
T ss_dssp HHHHHHHHHHH-CSEEEEESS-CHHHHHHHHHHSSSCEEEEECSSCCHHHHHHHHHHHHHHHSC----CTTCEEEEESCT
T ss_pred HHHHHHHHHHh-cCEEEEecC-ChHHHHHHHHhCCCCEEcCCCCCCCccHHHHHHHHHHHHhCC----cCCeEEEEECCC
Confidence 44455688888 899999875 5777899999999999997542 11 113333211 245699999983
Q ss_pred --HHHhhhh
Q 026201 225 --AILTAGF 231 (241)
Q Consensus 225 --~T~~s~~ 231 (241)
.+..|-+
T Consensus 186 ~~rva~Sl~ 194 (359)
T 2w37_A 186 RNNVANSLL 194 (359)
T ss_dssp TSHHHHHHH
T ss_pred ccchHHHHH
Confidence 5555443
No 361
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=24.68 E-value=2.3e+02 Score=26.50 Aligned_cols=52 Identities=19% Similarity=0.206 Sum_probs=34.4
Q ss_pred HHHHHHHhCCcEEEEeCCchhh-----hHHHHhccC-CCCeee--c-cHHHHHHHHHhcCC
Q 026201 157 KRVFLEKAGARCIVMPCHLSHI-----WHDEVCKGC-SVPFLH--V-SECVAKELKEANMK 208 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~-----~~d~l~~~~-~vPil~--I-id~t~~~i~~~~~k 208 (241)
.++.|.++|+|+|+|-+...|. +.+++++.+ ++|++- + -...++.+.+.|.+
T Consensus 235 ~a~~l~~aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD 295 (496)
T 4fxs_A 235 RVKALVEAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVS 295 (496)
T ss_dssp HHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCS
T ss_pred HHHHHHhccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCC
Confidence 3456788899999986554442 346777777 788743 2 22456677788875
No 362
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=24.65 E-value=1.3e+02 Score=21.62 Aligned_cols=39 Identities=15% Similarity=0.255 Sum_probs=28.6
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhHHH---HhccCCCCeeec
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWHDE---VCKGCSVPFLHV 194 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~d~---l~~~~~vPil~I 194 (241)
+..+.+++..|.++++|.|..--.... +.+..++|++..
T Consensus 22 ~v~kai~~gka~lViiA~D~~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 22 ETIRLAKTGGAKLIIVAKNAPKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp HHHHHHHHTCCSEEEEECCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHcCCccEEEEeCCCCHHHHHHHHHHHHHcCCCEEEe
Confidence 445677888899999999976555444 455678998665
No 363
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=24.63 E-value=88 Score=27.35 Aligned_cols=34 Identities=15% Similarity=0.052 Sum_probs=26.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+. +++|.+.|+|-|++.+.|--.+
T Consensus 30 dg~iD~~~l~~l----v~~li~~Gv~gi~v~GttGE~~ 63 (304)
T 3l21_A 30 DGSLDTATAARL----ANHLVDQGCDGLVVSGTTGESP 63 (304)
T ss_dssp TSCBCHHHHHHH----HHHHHHTTCSEEEESSTTTTGG
T ss_pred CCCcCHHHHHHH----HHHHHHcCCCEEEeCccccchh
Confidence 456777776554 4689999999999999987764
No 364
>2f00_A UDP-N-acetylmuramate--L-alanine ligase; amide bond ligase, ATPase, bacterial cell WALL; 2.50A {Escherichia coli}
Probab=24.60 E-value=1.1e+02 Score=28.18 Aligned_cols=66 Identities=11% Similarity=0.133 Sum_probs=38.9
Q ss_pred hCCcEEEEeCCc--hhhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhh-hhHHHHHHhcC
Q 026201 164 AGARCIVMPCHL--SHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTA-GFYQEKLQHED 240 (241)
Q Consensus 164 ~Gad~IvIaCNT--AH~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s-~~Y~~~L~~~G 240 (241)
.|+|+||+.--- -|..+.+.++ .++|+++.++...+.+.. . +.|+|-||.|-=.+ .+-...|++.|
T Consensus 77 ~~a~~vv~s~~i~~~~p~~~~a~~-~~ipvl~~~~~l~~~~~~--~--------~vI~VTGTnGKTTTt~ml~~iL~~~G 145 (491)
T 2f00_A 77 RDASVVVVSSAISADNPEIVAAHE-ARIPVIRRAEMLAELMRF--R--------HGIAIAGTHGKTTTTAMVSSIYAEAG 145 (491)
T ss_dssp TTCSEEEECTTCCTTCHHHHHHHH-TTCCEEEHHHHHHHHHTT--S--------EEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEECCCCCCCCHHHHHHHH-cCCcEEEHHHHHHHHHcC--C--------CEEEEECCCCHHHHHHHHHHHHHhCC
Confidence 489988875321 1333333332 489999988866554421 1 27999999874333 34445555555
No 365
>3sds_A Ornithine carbamoyltransferase, mitochondrial; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.80A {Coccidioides immitis}
Probab=24.34 E-value=80 Score=28.72 Aligned_cols=41 Identities=24% Similarity=0.309 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSE 196 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid 196 (241)
+.+.++-|.+. +|+|+|=.. .|...+++.+..++||||-.+
T Consensus 111 l~DTarvLs~~-~D~IviR~~-~~~~~~~lA~~s~vPVINag~ 151 (353)
T 3sds_A 111 LYDTSVVISSM-VSCIVARVG-PHSDIANLAKHSSVPVINALC 151 (353)
T ss_dssp HHHHHHHHHTS-CSEEEEECS-SHHHHHHHHHHCSSCEEEEEC
T ss_pred HHHHHHHHHHh-cCEEEEEeC-ChHHHHHHHhhCCCCEEECCC
Confidence 45556788888 899998754 466678888889999999863
No 366
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=24.30 E-value=62 Score=28.11 Aligned_cols=41 Identities=10% Similarity=0.086 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCcEEEEeCCchhh---------hHHHHhccCCCCee
Q 026201 152 ENLRRKRVFLEKAGARCIVMPCHLSHI---------WHDEVCKGCSVPFL 192 (241)
Q Consensus 152 ~~l~~~~~~Le~~Gad~IvIaCNTAH~---------~~d~l~~~~~vPil 192 (241)
+...+.++..++.|||.+++...-... +|.+|.+.+++||+
T Consensus 78 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a~~lPii 127 (293)
T 1w3i_A 78 DDAIRLAKLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEVSPHPVY 127 (293)
T ss_dssp HHHHHHHHHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHHCSSCEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhhCCCCEE
No 367
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=24.28 E-value=70 Score=27.89 Aligned_cols=33 Identities=9% Similarity=-0.072 Sum_probs=25.2
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 143 ~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
...|++.+.+ .+++|.+.|+|-|++.+.|--.+
T Consensus 23 g~iD~~~l~~----lv~~li~~Gv~gl~v~GttGE~~ 55 (301)
T 3m5v_A 23 GKVDEQSYAR----LIKRQIENGIDAVVPVGTTGESA 55 (301)
T ss_dssp TEECHHHHHH----HHHHHHHTTCCEEECSSTTTTGG
T ss_pred CCCCHHHHHH----HHHHHHHcCCCEEEECccccChh
Confidence 4557666554 44689999999999999988764
No 368
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=24.01 E-value=1.9e+02 Score=23.18 Aligned_cols=92 Identities=13% Similarity=0.084 Sum_probs=46.8
Q ss_pred cCCeEEEEe-CCChHHHHHHHHHHHHHhccC-CCCCEEEec-CccchHHh--------------h--hcCCChhhhhccc
Q 026201 79 QANTVGIVG-GASVDSTLNLLGKLVQLSGEE-NDFPFLLCS-DPLLNKEL--------------L--SHDRSSFSSLNCK 139 (241)
Q Consensus 79 ~~k~IGIIG-GmGp~AT~~fy~kI~~~t~~d-~~~~~vi~S-~p~i~d~l--------------l--~~~~~~~~~~~~~ 139 (241)
+.++|=++| |-+...+.+|..++....... -..+.+... ++.+...+ . ....|-.-..
T Consensus 45 ~~~~I~i~G~G~S~~~A~~~~~~l~~~~~~~r~g~~~~~~~~d~~~~~a~~~d~~~~~~~~~~l~~~~~~~Dvvi~i--- 121 (201)
T 3trj_A 45 NGGKVLVCGNGSSGVIAQHFTSKLLNHFEMERPPLPAIALTGDVATITAVGNHYGFSQIFAKQVAALGNEDDILLVI--- 121 (201)
T ss_dssp TTCCEEEEESTHHHHHHHHHHHHHHC-------CCCEEETTSCHHHHHHHHHHTCGGGTTHHHHHHHCCTTCEEEEE---
T ss_pred CCCEEEEEeCcHhHHHHHHHHHHhcCccCCCCCCCceEEccCChHHHHHhccCCCHHHHHHHHHHhhCCCCCEEEEE---
Confidence 458999997 656666667777776433322 334555544 44322111 0 0112211111
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 140 GGGVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 140 ~~~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
...+.-.+++ +.++.+.+.|+..|+|.++.-...
T Consensus 122 --S~SG~t~~~~----~~~~~ak~~g~~vi~iT~~~~s~l 155 (201)
T 3trj_A 122 --TTSGDSENIL----SAVEEAHDLEMKVIALTGGSGGAL 155 (201)
T ss_dssp --CSSSCCHHHH----HHHHHHHHTTCEEEEEEETTCCGG
T ss_pred --eCCCCCHHHH----HHHHHHHHCCCcEEEEECCCCCHH
Confidence 1222333343 345678889999999999865544
No 369
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=23.91 E-value=2.9e+02 Score=22.39 Aligned_cols=51 Identities=20% Similarity=-0.022 Sum_probs=32.4
Q ss_pred HHHHHHHhCCcEEEEeCCch--------hhhHHHHhccCCCCeeeccH----HHHHHHHHhcC
Q 026201 157 KRVFLEKAGARCIVMPCHLS--------HIWHDEVCKGCSVPFLHVSE----CVAKELKEANM 207 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTA--------H~~~d~l~~~~~vPil~Iid----~t~~~i~~~~~ 207 (241)
.++.+++.|++.|++...+. -..+.++++.+++|++-... .-++.+.+.|.
T Consensus 156 ~~~~~~~~G~~~i~~~~~~~~g~~~g~~~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~Ga 218 (253)
T 1thf_D 156 WVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGA 218 (253)
T ss_dssp HHHHHHHTTCSEEEEEETTTTTSCSCCCHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTC
T ss_pred HHHHHHHCCCCEEEEEeccCCCCCCCCCHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCC
Confidence 34567789999888754321 11357788888999986432 44555556554
No 370
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=23.81 E-value=1e+02 Score=27.35 Aligned_cols=34 Identities=9% Similarity=-0.069 Sum_probs=25.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+. +++|.+.|+|-|++.+.|--.+
T Consensus 49 dg~iD~~~l~~l----v~~li~~Gv~Gl~v~GtTGE~~ 82 (332)
T 2r8w_A 49 AGRVDIEAFSAL----IARLDAAEVDSVGILGSTGIYM 82 (332)
T ss_dssp TCCBCHHHHHHH----HHHHHHHTCSEEEESSTTTTGG
T ss_pred CCCcCHHHHHHH----HHHHHHcCCCEEEECccccChh
Confidence 345677766554 4689999999999999887664
No 371
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=23.71 E-value=2e+02 Score=24.66 Aligned_cols=16 Identities=19% Similarity=0.179 Sum_probs=10.4
Q ss_pred HHHHhccCCCCeeecc
Q 026201 180 HDEVCKGCSVPFLHVS 195 (241)
Q Consensus 180 ~d~l~~~~~vPil~Ii 195 (241)
..++++..++|++-|.
T Consensus 83 v~~ir~~~~~Pii~m~ 98 (271)
T 1ujp_A 83 VREVRALTEKPLFLMT 98 (271)
T ss_dssp HHHHHHHCCSCEEEEC
T ss_pred HHHHHhcCCCCEEEEe
Confidence 4666666777777653
No 372
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=23.46 E-value=86 Score=27.17 Aligned_cols=32 Identities=13% Similarity=0.115 Sum_probs=24.8
Q ss_pred CCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 144 QLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 144 ~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
..|++.+.+ .+++|.+.|+|-|++.+.|--.+
T Consensus 19 ~iD~~~l~~----lv~~li~~Gv~gl~v~GttGE~~ 50 (292)
T 3daq_A 19 KVNLEALKA----HVNFLLENNAQAIIVNGTTAESP 50 (292)
T ss_dssp EECHHHHHH----HHHHHHHTTCCEEEESSGGGTGG
T ss_pred CcCHHHHHH----HHHHHHHcCCCEEEECccccccc
Confidence 556666544 45789999999999999988764
No 373
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=23.43 E-value=70 Score=28.74 Aligned_cols=72 Identities=11% Similarity=0.100 Sum_probs=47.8
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH-------HH--HHHHHhcCCCCCCCCCCEEEEEecH
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC-------VA--KELKEANMKPLEAGSPLRIGVLAKN 224 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~-------t~--~~i~~~~~k~~~~~~~~rVGLLaT~ 224 (241)
+.+.++-|.+. +|+|||=.. .|-..+++.+..++||||-.+. .+ -.+++...+ .++.+|+++|-.
T Consensus 103 l~DTarvLs~~-~D~iviR~~-~~~~~~~lA~~~~vPVINa~~~~~HPtQaLaDl~Ti~e~~g~----l~gl~va~vGD~ 176 (325)
T 1vlv_A 103 LEDTARVLGRM-VDAIMFRGY-KQETVEKLAEYSGVPVYNGLTDEFHPTQALADLMTIEENFGR----LKGVKVVFMGDT 176 (325)
T ss_dssp HHHHHHHHHTT-CSEEEEESS-CHHHHHHHHHHHCSCEEESCCSSCCHHHHHHHHHHHHHHHSC----STTCEEEEESCT
T ss_pred HHHHHHHHHHh-CCEEEEECC-ChHHHHHHHHhCCCCEEeCCCCCCCcHHHHHHHHHHHHHhCC----cCCcEEEEECCC
Confidence 44455688888 899999865 5777888988889999997652 11 113333211 245699999983
Q ss_pred --HHHhhhh
Q 026201 225 --AILTAGF 231 (241)
Q Consensus 225 --~T~~s~~ 231 (241)
.+..|-+
T Consensus 177 ~~rva~Sl~ 185 (325)
T 1vlv_A 177 RNNVATSLM 185 (325)
T ss_dssp TSHHHHHHH
T ss_pred CcCcHHHHH
Confidence 4544433
No 374
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=23.30 E-value=75 Score=27.54 Aligned_cols=61 Identities=10% Similarity=0.225 Sum_probs=37.3
Q ss_pred HHHHHHHHhCCcEEEEeCCchh--------hhHHHHhccCCCCee--e--------ccHHHHHHHHHhcCCCCCCCCCCE
Q 026201 156 RKRVFLEKAGARCIVMPCHLSH--------IWHDEVCKGCSVPFL--H--------VSECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH--------~~~d~l~~~~~vPil--~--------Iid~t~~~i~~~~~k~~~~~~~~r 217 (241)
+.++..++.|||.+++...-.. .+|++|.+.+++||+ | |-..++..+.+. .+-
T Consensus 88 ~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~---------pni 158 (292)
T 3daq_A 88 QASIQAKALGADAIMLITPYYNKTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQH---------PYI 158 (292)
T ss_dssp HHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTS---------TTE
T ss_pred HHHHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcC---------CCE
Confidence 3446778899998888764322 146778887788863 3 333455555542 226
Q ss_pred EEEEecHH
Q 026201 218 IGVLAKNA 225 (241)
Q Consensus 218 VGLLaT~~ 225 (241)
||+=-|.+
T Consensus 159 vgiK~ssg 166 (292)
T 3daq_A 159 VALKDATN 166 (292)
T ss_dssp EEEEECCC
T ss_pred EEEEeCCC
Confidence 77765554
No 375
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=23.18 E-value=72 Score=27.04 Aligned_cols=48 Identities=8% Similarity=0.025 Sum_probs=35.4
Q ss_pred HHH-hCCcEEEEeCC-chhhhHHHHhc-----cCCCCeeeccHHHHHHHHHhcCC
Q 026201 161 LEK-AGARCIVMPCH-LSHIWHDEVCK-----GCSVPFLHVSECVAKELKEANMK 208 (241)
Q Consensus 161 Le~-~Gad~IvIaCN-TAH~~~d~l~~-----~~~vPil~Iid~t~~~i~~~~~k 208 (241)
|++ ..+|.|++.+- ++..|++.+.+ ..+++++-|.+.|++.+++.|++
T Consensus 205 l~~~~~~d~v~ftS~~~v~~f~~~~~~~~~~~l~~~~i~aIG~~Ta~~l~~~G~~ 259 (286)
T 1jr2_A 205 YSQQGVPASITFFSPSGLTYSLKHIQELSGDNIDQIKFAAIGPTTARALAAQGLP 259 (286)
T ss_dssp HHHHCSCSEEEESSHHHHHHHHHHHHHHHGGGGGGSEEEESSHHHHHHHHHTTCC
T ss_pred HHhCCCCCEEEEEChHHHHHHHHHHhhhccccccCCEEEEECHHHHHHHHHcCCC
Confidence 444 56899988764 45666666654 23578999999999999998875
No 376
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=23.08 E-value=99 Score=26.70 Aligned_cols=33 Identities=12% Similarity=-0.042 Sum_probs=25.2
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+. .|++.+.+. +++|.+.|+|-|++.+.|--.+
T Consensus 17 dg-iD~~~l~~l----v~~li~~Gv~gl~~~GttGE~~ 49 (291)
T 3a5f_A 17 TG-VDFDKLSEL----IEWHIKSKTDAIIVCGTTGEAT 49 (291)
T ss_dssp SS-BCHHHHHHH----HHHHHHTTCCEEEESSGGGTGG
T ss_pred CC-cCHHHHHHH----HHHHHHcCCCEEEECccccChh
Confidence 35 677776554 4689999999999999887664
No 377
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=23.05 E-value=1.1e+02 Score=27.25 Aligned_cols=38 Identities=13% Similarity=0.180 Sum_probs=26.2
Q ss_pred HHHHHHHHhCCcEEEEeCCchh-------hhHHHHhccCCCCeee
Q 026201 156 RKRVFLEKAGARCIVMPCHLSH-------IWHDEVCKGCSVPFLH 193 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH-------~~~d~l~~~~~vPil~ 193 (241)
+.++.+...|.|+|.|-+--.. .+.+.+++.+++|++=
T Consensus 57 ~~~~~~~~sGtDai~VGS~~vt~~~~~~~~~v~~ik~~~~lPvil 101 (286)
T 3vk5_A 57 EKAAELTRLGFAAVLLASTDYESFESHMEPYVAAVKAATPLPVVL 101 (286)
T ss_dssp HHHHHHHHTTCSCEEEECSCCSSHHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHhcCCCEEEEccCCCCcchHHHHHHHHHHHHhCCCCEEE
Confidence 3445678899999999932123 2346778878899764
No 378
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=23.05 E-value=3.3e+02 Score=22.65 Aligned_cols=40 Identities=8% Similarity=0.008 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCee
Q 026201 153 NLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFL 192 (241)
Q Consensus 153 ~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil 192 (241)
.+.+..+.+.+.+.|+|+.-........-......++|++
T Consensus 84 ~~~~l~~~l~~~~pDvv~~~~~~~~~~~~~~~~~~~~p~v 123 (364)
T 1f0k_A 84 AWRQARAIMKAYKPDVVLGMGGYVSGPGGLAAWSLGIPVV 123 (364)
T ss_dssp HHHHHHHHHHHHCCSEEEECSSTTHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcCchHHHHHHHHcCCCEE
Confidence 4455667788889999988654333333333445677866
No 379
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=22.99 E-value=4.5e+02 Score=24.19 Aligned_cols=88 Identities=15% Similarity=0.202 Sum_probs=52.6
Q ss_pred CCChHHHHHHHHHHHHHhccCCCCCEEEecCccchHHhhhcCCChhhhhcccCCCCCCCHHHHHHHHHHHHHHHHHhCCc
Q 026201 88 GASVDSTLNLLGKLVQLSGEENDFPFLLCSDPLLNKELLSHDRSSFSSLNCKGGGVQLDDSLIVENLRRKRVFLEKAGAR 167 (241)
Q Consensus 88 GmGp~AT~~fy~kI~~~t~~d~~~~~vi~S~p~i~d~ll~~~~~~~~~~~~~~~~~~~d~~~i~~~l~~~~~~Le~~Gad 167 (241)
|+-|.++.++.++=.....+.. =..|.|- -+.|..+- .....-++++....+-+...|..|+.
T Consensus 90 GLDW~~a~ELIrRs~aeA~~~p-g~~ia~G----------~GTDqL~~------~~~~~l~~V~~AY~EQ~~~Ve~~G~~ 152 (396)
T 4dnh_A 90 GLGWPEARELIRRSLAEARGRP-DALIACG----------AGTDHLAP------GPDVSIDDILAAYESQIEAIEAEGGR 152 (396)
T ss_dssp TBCHHHHHHHHHHHHHHHHTSS-SCCEEEE----------ECCTTSCC------CTTCCHHHHHHHHHHHHHHHHHTTCC
T ss_pred CCCcHHHHHHHHHHHHHHhcCC-CCeeeec----------cCcCCCCC------CCCCCHHHHHHHHHHHHHHHHHcCCe
Confidence 6678999888777555443320 0112222 11222110 01124567788888888999999999
Q ss_pred EEEEeCCchh----------hhHHHHhccCCCCee
Q 026201 168 CIVMPCHLSH----------IWHDEVCKGCSVPFL 192 (241)
Q Consensus 168 ~IvIaCNTAH----------~~~d~l~~~~~vPil 192 (241)
.|+|++--.- .+|+++-.+++-|+|
T Consensus 153 ~ILMASRaLA~~A~~pdDY~~VY~~vL~q~~~PVI 187 (396)
T 4dnh_A 153 IILMASRALAAAAKGPEDYIRVYDRVLSQVKEPVI 187 (396)
T ss_dssp EEECCCHHHHHHCCSHHHHHHHHHHHHHHCSSCEE
T ss_pred EEEehhHHHHHHhCCHHHHHHHHHHHHHhcCCCEE
Confidence 9999975322 246777777777754
No 380
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=22.87 E-value=1.1e+02 Score=26.84 Aligned_cols=34 Identities=18% Similarity=0.180 Sum_probs=26.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+. +++|.+.|+|-|++.+.|--.+
T Consensus 23 dg~iD~~~l~~l----v~~li~~Gv~gl~v~GtTGE~~ 56 (309)
T 3fkr_A 23 TGDLDLASQKRA----VDFMIDAGSDGLCILANFSEQF 56 (309)
T ss_dssp TSSBCHHHHHHH----HHHHHHTTCSCEEESSGGGTGG
T ss_pred CCCcCHHHHHHH----HHHHHHcCCCEEEECccccCcc
Confidence 456677776554 4689999999999999887754
No 381
>2a8y_A 5'-methylthioadenosine phosphorylase (MTAP); alpha/beta, beta sheet, beta barrel, transferase; HET: MTA; 1.45A {Sulfolobus solfataricus} PDB: 3t94_A* 1v4n_A
Probab=22.86 E-value=32 Score=29.75 Aligned_cols=11 Identities=36% Similarity=1.045 Sum_probs=9.5
Q ss_pred CeEEEEeCCCh
Q 026201 81 NTVGIVGGASV 91 (241)
Q Consensus 81 k~IGIIGGmGp 91 (241)
.+||||||||-
T Consensus 8 p~igIIggsgl 18 (270)
T 2a8y_A 8 ASIGIIGGSGL 18 (270)
T ss_dssp CSEEEEECTTC
T ss_pred CCEEEEecCch
Confidence 36999999995
No 382
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=22.80 E-value=79 Score=27.36 Aligned_cols=41 Identities=7% Similarity=0.141 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCcEEEEeCCchhh--------hHHHHhccCCCCee
Q 026201 152 ENLRRKRVFLEKAGARCIVMPCHLSHI--------WHDEVCKGCSVPFL 192 (241)
Q Consensus 152 ~~l~~~~~~Le~~Gad~IvIaCNTAH~--------~~d~l~~~~~vPil 192 (241)
+...+.++..++.|||.+++...-... +|.+|.+.+++||+
T Consensus 86 ~~ai~la~~a~~~Gadavlv~~P~y~~~~~~~l~~~f~~va~a~~lPii 134 (293)
T 1f6k_A 86 KEAVELGKYATELGYDCLSAVTPFYYKFSFPEIKHYYDTIIAETGSNMI 134 (293)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHHHCCCEE
T ss_pred HHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhCCCCEE
No 383
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A
Probab=22.77 E-value=3.5e+02 Score=24.43 Aligned_cols=51 Identities=16% Similarity=0.130 Sum_probs=30.4
Q ss_pred CCCHHHHH-HHHHHHH-HHHHHhC-----CcEEEEeCCchhhh-HHHHhccCCCCeeec
Q 026201 144 QLDDSLIV-ENLRRKR-VFLEKAG-----ARCIVMPCHLSHIW-HDEVCKGCSVPFLHV 194 (241)
Q Consensus 144 ~~d~~~i~-~~l~~~~-~~Le~~G-----ad~IvIaCNTAH~~-~d~l~~~~~vPil~I 194 (241)
...|++-. +...+++ +-|+++| +|+|+.++.|.+.. ...++..+++|.++|
T Consensus 48 ~~t~e~a~sdLa~~Aa~~AL~~AGi~~~DID~II~gt~t~q~~~A~~va~~LgipafdV 106 (347)
T 3lma_A 48 QKNWEMAERKLMEDAVQSALSKQNLKKEDIDIFLAGDLLNQNVTANYVARHLKIPFLCL 106 (347)
T ss_dssp SSSHHHHHHHHHHHHHHHHHHTTTCCGGGCSEEEEEESSSSSTTHHHHHHHHCCCEEEB
T ss_pred CcCccHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEeCCCchhHHHHHHHHhCCCEEEe
Confidence 34566543 3334443 5677777 68999887764322 233444458999987
No 384
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=22.71 E-value=57 Score=29.06 Aligned_cols=71 Identities=17% Similarity=0.152 Sum_probs=47.6
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeeccHH--------H--HHHHHHhcCCCCCCCCCCEEEEEec
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVSEC--------V--AKELKEANMKPLEAGSPLRIGVLAK 223 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Iid~--------t--~~~i~~~~~k~~~~~~~~rVGLLaT 223 (241)
+.+.++-|.+. +|+||+=.. .|-..+++.+..++||||..+- . .-.+++...+ ..+.+|+++|-
T Consensus 90 l~DTarvls~~-~D~iviR~~-~~~~~~~la~~~~vPVINag~g~~~HPtQ~LaDl~Ti~e~~g~----l~gl~va~vGD 163 (308)
T 1ml4_A 90 LRDTIKTVEQY-CDVIVIRHP-KEGAARLAAEVAEVPVINAGDGSNQHPTQTLLDLYTIKKEFGR----IDGLKIGLLGD 163 (308)
T ss_dssp HHHHHHHHTTT-CSEEEEEES-STTHHHHHHHTCSSCEEEEEETTSCCHHHHHHHHHHHHHHSSC----SSSEEEEEESC
T ss_pred HHHHHHHHHHh-CcEEEEecC-ChhHHHHHHHhCCCCEEeCccCCccCcHHHHHHHHHHHHHhCC----CCCeEEEEeCC
Confidence 44555778888 899999865 5777889999999999998761 1 1123443211 23569999997
Q ss_pred H---HHHhhh
Q 026201 224 N---AILTAG 230 (241)
Q Consensus 224 ~---~T~~s~ 230 (241)
- .+..|-
T Consensus 164 ~~~~rva~Sl 173 (308)
T 1ml4_A 164 LKYGRTVHSL 173 (308)
T ss_dssp TTTCHHHHHH
T ss_pred CCcCchHHHH
Confidence 3 454443
No 385
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=22.67 E-value=2.1e+02 Score=29.18 Aligned_cols=55 Identities=20% Similarity=0.215 Sum_probs=37.1
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhh-------------------hHHHHhccCCCCee-----ec--cHHHHHHHHHhcC
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHI-------------------WHDEVCKGCSVPFL-----HV--SECVAKELKEANM 207 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~-------------------~~d~l~~~~~vPil-----~I--id~t~~~i~~~~~ 207 (241)
..+.++.+++.|+|.|.|-++..+. ..+.+++.+++||+ ++ +...++.+.+.|.
T Consensus 650 ~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~~~Pv~vK~~~~~~~~~~~a~~~~~~G~ 729 (1025)
T 1gte_A 650 WMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTDIVSIARAAKEGGA 729 (1025)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHCSSCEEEEECSCSSCHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhhCCceEEEeCCChHHHHHHHHHHHHcCC
Confidence 3445677888999999997664442 34667777888876 22 2345667777776
Q ss_pred C
Q 026201 208 K 208 (241)
Q Consensus 208 k 208 (241)
+
T Consensus 730 d 730 (1025)
T 1gte_A 730 D 730 (1025)
T ss_dssp S
T ss_pred C
Confidence 5
No 386
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=22.49 E-value=49 Score=29.17 Aligned_cols=34 Identities=18% Similarity=0.050 Sum_probs=25.9
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+. +++|.+.|+|-|++.+.|--.+
T Consensus 27 dg~iD~~~l~~l----v~~li~~Gv~Gl~v~GtTGE~~ 60 (316)
T 3e96_A 27 DGSIDWHHYKET----VDRIVDNGIDVIVPCGNTSEFY 60 (316)
T ss_dssp TCCBCHHHHHHH----HHHHHTTTCCEECTTSGGGTGG
T ss_pred CCCCCHHHHHHH----HHHHHHcCCCEEEeCccccCcc
Confidence 456677776554 4689999999999999886654
No 387
>3eth_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; ATP-grAsp, purine biosynthesis, antimicrobial, ATP-binding, decarboxylase, lyase; HET: ATP; 1.60A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1b6r_A* 3etj_A* 1b6s_A*
Probab=22.44 E-value=30 Score=31.07 Aligned_cols=22 Identities=23% Similarity=0.220 Sum_probs=13.7
Q ss_pred CCeEEEEeCCChHHHHHHHHHHHHHhcc
Q 026201 80 ANTVGIVGGASVDSTLNLLGKLVQLSGE 107 (241)
Q Consensus 80 ~k~IGIIGGmGp~AT~~fy~kI~~~t~~ 107 (241)
||+||||||= ..=+.+.....+
T Consensus 1 Mk~igilGgG------qlg~m~~~aa~~ 22 (355)
T 3eth_A 1 MKQVCVLGNG------QLGRMLRQAGEP 22 (355)
T ss_dssp CCEEEEESCS------HHHHHHHHHHGG
T ss_pred CCEEEEECCC------HHHHHHHHHHHH
Confidence 6889999863 334445554444
No 388
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=22.20 E-value=1e+02 Score=27.59 Aligned_cols=60 Identities=13% Similarity=0.134 Sum_probs=37.0
Q ss_pred HHHHHHHhCCcEEEEeCCchhh---------hHHHHhc-cCCCCee--e-------ccHHHHHHH-HHhcCCCCCCCCCC
Q 026201 157 KRVFLEKAGARCIVMPCHLSHI---------WHDEVCK-GCSVPFL--H-------VSECVAKEL-KEANMKPLEAGSPL 216 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~---------~~d~l~~-~~~vPil--~-------Iid~t~~~i-~~~~~k~~~~~~~~ 216 (241)
.++..++.|||.+++...-... +|+.|.+ .+++||+ | |-..++..+ .+. .+
T Consensus 110 la~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L~a~~---------pn 180 (344)
T 2hmc_A 110 HAVHAQKVGAKGLMVIPRVLSRGSVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFALRAEH---------KN 180 (344)
T ss_dssp HHHHHHHHTCSEEEECCCCSSSTTCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHHHHHC---------TT
T ss_pred HHHHHHhcCCCEEEECCCccCCCCCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHHHhcC---------CC
Confidence 4456788999988886553322 4577888 7888853 3 334566666 432 12
Q ss_pred EEEEEecHH
Q 026201 217 RIGVLAKNA 225 (241)
Q Consensus 217 rVGLLaT~~ 225 (241)
-||+==|.+
T Consensus 181 IvGiKdssg 189 (344)
T 2hmc_A 181 LVGFKEFGG 189 (344)
T ss_dssp EEEEEECSC
T ss_pred EEEEEcCCC
Confidence 677755544
No 389
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=22.19 E-value=57 Score=26.52 Aligned_cols=24 Identities=17% Similarity=0.221 Sum_probs=15.5
Q ss_pred CcchhhccCCeEEEEeCCChHHHHH
Q 026201 72 CSDALLNQANTVGIVGGASVDSTLN 96 (241)
Q Consensus 72 ~~~~~~~~~k~IGIIGGmGp~AT~~ 96 (241)
..+.+++.|++||||| .|..++.-
T Consensus 15 ~~~~~~m~mmkI~IIG-~G~mG~~l 38 (220)
T 4huj_A 15 TENLYFQSMTTYAIIG-AGAIGSAL 38 (220)
T ss_dssp --CTTGGGSCCEEEEE-CHHHHHHH
T ss_pred ccchhhhcCCEEEEEC-CCHHHHHH
Confidence 3444555577999996 77777653
No 390
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=22.12 E-value=1.5e+02 Score=26.39 Aligned_cols=49 Identities=14% Similarity=0.166 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 147 DSLIVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 147 ~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
.+.+...+.+..+.|++...|++++-..|...+.-......+||++|+.
T Consensus 76 ~~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~e 124 (385)
T 4hwg_A 76 AKSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHME 124 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEES
T ss_pred HHHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEEe
Confidence 3455566777788999999999999887777665222335789999863
No 391
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=21.88 E-value=1e+02 Score=26.68 Aligned_cols=34 Identities=9% Similarity=-0.065 Sum_probs=25.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+. +++|.+.|+|-|++.+.|--.+
T Consensus 16 dg~iD~~~l~~l----v~~li~~Gv~gl~~~GttGE~~ 49 (292)
T 2ojp_A 16 KGNVCRASLKKL----IDYHVASGTSAIVSVGTTGESA 49 (292)
T ss_dssp TSCBCHHHHHHH----HHHHHHHTCCEEEESSTTTTGG
T ss_pred CCCcCHHHHHHH----HHHHHHcCCCEEEECccccchh
Confidence 356677776554 4688999999999998887654
No 392
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=21.82 E-value=2.6e+02 Score=24.31 Aligned_cols=37 Identities=5% Similarity=0.052 Sum_probs=25.0
Q ss_pred HHHHHHHHhCC-cEEEEeCCchh--------hhHHHHhccCCCCee
Q 026201 156 RKRVFLEKAGA-RCIVMPCHLSH--------IWHDEVCKGCSVPFL 192 (241)
Q Consensus 156 ~~~~~Le~~Ga-d~IvIaCNTAH--------~~~d~l~~~~~vPil 192 (241)
+.++..++.|+ |.+++.+.-.. .+|++|.+.+++||+
T Consensus 93 ~la~~A~~~Ga~davlv~~P~y~~~s~~~l~~~f~~va~a~~lPii 138 (311)
T 3h5d_A 93 EFVKEVAEFGGFAAGLAIVPYYNKPSQEGMYQHFKAIADASDLPII 138 (311)
T ss_dssp HHHHHHHHSCCCSEEEEECCCSSCCCHHHHHHHHHHHHHSCSSCEE
T ss_pred HHHHHHHhcCCCcEEEEcCCCCCCCCHHHHHHHHHHHHHhCCCCEE
Confidence 34466788887 98877764321 256788888888864
No 393
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=21.78 E-value=1.4e+02 Score=22.01 Aligned_cols=49 Identities=14% Similarity=0.214 Sum_probs=32.8
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhH---HHHhccCCCCeeeccHHHHHHHHHh
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWH---DEVCKGCSVPFLHVSECVAKELKEA 205 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~---d~l~~~~~vPil~Iid~t~~~i~~~ 205 (241)
+..+.+++..|.++++|.|..--.. +.+.+..+||++.... +-+++-..
T Consensus 28 ~v~kai~~gka~lViiA~D~~~~~~~~l~~~c~~~~Vp~~~~~~-sk~eLG~a 79 (110)
T 3cpq_A 28 RTIKFVKHGEGKLVVLAGNIPKDLEEDVKYYAKLSNIPVYQHKI-TSLELGAV 79 (110)
T ss_dssp HHHHHHHTTCCSEEEECTTCBHHHHHHHHHHHHHTTCCEEECCS-CHHHHHHH
T ss_pred HHHHHHHcCCceEEEEeCCCCHHHHHHHHHHHHHcCCCEEEEcC-CHHHHHHH
Confidence 4456778888999999999954443 4556667899877622 33444443
No 394
>4f2d_A L-arabinose isomerase; structural genomics, PSI-1, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: MSE RB0; 2.30A {Escherichia coli} PDB: 2ajt_A 2hxg_A
Probab=21.56 E-value=1.5e+02 Score=28.12 Aligned_cols=38 Identities=11% Similarity=-0.101 Sum_probs=28.4
Q ss_pred HHHHHH-HHhCCcEEEEeCCchhhh---HHHHhccCCCCeeec
Q 026201 156 RKRVFL-EKAGARCIVMPCHLSHIW---HDEVCKGCSVPFLHV 194 (241)
Q Consensus 156 ~~~~~L-e~~Gad~IvIaCNTAH~~---~d~l~~~~~vPil~I 194 (241)
+.++.+ .+.+||.|++...|...- +.-++ .+++|+++.
T Consensus 62 ~~~~~~n~~~~vdgvi~~~~TFs~a~~~i~~l~-~l~~PvL~~ 103 (500)
T 4f2d_A 62 AICRDANYDDRCAGLVVWLHTFSPAKMWINGLT-MLNKPLLQF 103 (500)
T ss_dssp HHHHHHHHCTTEEEEEEECCSCCCTHHHHHHHH-HCCSCEEEE
T ss_pred HHHHHhccccCCcEEEEeCCcCccHHHHHHHHH-hcCCCEEEE
Confidence 344567 688999999999998863 45554 578999884
No 395
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=21.37 E-value=2.5e+02 Score=23.98 Aligned_cols=34 Identities=15% Similarity=0.095 Sum_probs=24.6
Q ss_pred HHHhCCcEEEEeCCchhh--hHHHHhc-cCCCCeeec
Q 026201 161 LEKAGARCIVMPCHLSHI--WHDEVCK-GCSVPFLHV 194 (241)
Q Consensus 161 Le~~Gad~IvIaCNTAH~--~~d~l~~-~~~vPil~I 194 (241)
+.+.++|+|+++++.... ++.++++ ..++|++..
T Consensus 195 l~~~~~dav~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 231 (391)
T 3eaf_A 195 MLAADPDYVWCGNTISSCSLLGRAMAKVGLDAFLLTN 231 (391)
T ss_dssp HHTTCCSEEEECSCHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred HHHcCCCEEEEecCcHHHHHHHHHHHHCCCCceEEEe
Confidence 677899999998875443 3466654 478898875
No 396
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=21.34 E-value=64 Score=28.90 Aligned_cols=24 Identities=17% Similarity=0.209 Sum_probs=19.8
Q ss_pred hccCCeEEEEe-CCChHHHHHHHHH
Q 026201 77 LNQANTVGIVG-GASVDSTLNLLGK 100 (241)
Q Consensus 77 ~~~~k~IGIIG-GmGp~AT~~fy~k 100 (241)
|+.|+.|-||| |.+..+++..+++
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~ 25 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKE 25 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHH
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhc
Confidence 44578999998 7888988888877
No 397
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=21.13 E-value=1.1e+02 Score=26.12 Aligned_cols=36 Identities=8% Similarity=0.163 Sum_probs=23.2
Q ss_pred HHHHHHhCCcEEEEe-CCc--hhhh---HHHHhccCCCCeeec
Q 026201 158 RVFLEKAGARCIVMP-CHL--SHIW---HDEVCKGCSVPFLHV 194 (241)
Q Consensus 158 ~~~Le~~Gad~IvIa-CNT--AH~~---~d~l~~~~~vPil~I 194 (241)
++.|+++|+|+|.+- ++- .... .+++++ .++|++=|
T Consensus 26 ~~~l~~~GaD~IelG~S~g~t~~~~~~~v~~ir~-~~~Pivl~ 67 (234)
T 2f6u_A 26 IKAVADSGTDAVMISGTQNVTYEKARTLIEKVSQ-YGLPIVVE 67 (234)
T ss_dssp HHHHHTTTCSEEEECCCTTCCHHHHHHHHHHHTT-SCCCEEEC
T ss_pred HHHHHHcCCCEEEECCCCCCCHHHHHHHHHHhcC-CCCCEEEe
Confidence 457889999999986 322 2212 366766 67886543
No 398
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=21.05 E-value=1.1e+02 Score=27.43 Aligned_cols=34 Identities=21% Similarity=-0.029 Sum_probs=25.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+. +++|.+.|+|.|++.+.|--.+
T Consensus 46 dg~ID~~~l~~l----v~~li~~Gv~Gl~v~GtTGE~~ 79 (343)
T 2v9d_A 46 DGQLDKPGTAAL----IDDLIKAGVDGLFFLGSGGEFS 79 (343)
T ss_dssp TSSBCHHHHHHH----HHHHHHTTCSCEEESSTTTTGG
T ss_pred CCCcCHHHHHHH----HHHHHHcCCCEEEeCccccChh
Confidence 356677776554 4689999999999998877654
No 399
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=21.04 E-value=3.3e+02 Score=24.58 Aligned_cols=69 Identities=9% Similarity=0.038 Sum_probs=39.2
Q ss_pred CCcEEEEeCCchhhh-HHHHhccCCCCeeec--------------------------cHHHHHHHHHhcCCCCCCCCCCE
Q 026201 165 GARCIVMPCHLSHIW-HDEVCKGCSVPFLHV--------------------------SECVAKELKEANMKPLEAGSPLR 217 (241)
Q Consensus 165 Gad~IvIaCNTAH~~-~d~l~~~~~vPil~I--------------------------id~t~~~i~~~~~k~~~~~~~~r 217 (241)
++.+|+=+..+.... ...+-+..++|.|+- ..+.++.++..+. ++
T Consensus 116 ~v~aviG~~~S~~s~ava~i~~~~~iP~Is~~a~~~~lsd~~~~p~~fr~~psd~~~~~a~~~ll~~fgw--------~~ 187 (479)
T 3sm9_A 116 LIAGVIGGSYSSVSIQVANLLRLFQIPQISYASTSAKLSDKSRYDYFARTVPPDFYQAKAMAEILRFFNW--------TY 187 (479)
T ss_dssp CEEEEECCSSHHHHHHHHHHHGGGTCCEEESSCCCGGGGCTTTTTTEEESSCCTHHHHHHHHHHHHHTTC--------CE
T ss_pred ceEEEECCCCcHHHHHHHHHHhcCCccEECCCcCCccccCcccCCCeEEeCCcHHHHHHHHHHHHHHCCC--------eE
Confidence 455555555544433 345555556666652 2245555555544 49
Q ss_pred EEEEecHHHHh---hhhHHHHHHhcCC
Q 026201 218 IGVLAKNAILT---AGFYQEKLQHEDC 241 (241)
Q Consensus 218 VGLLaT~~T~~---s~~Y~~~L~~~G~ 241 (241)
||++.++...- ...+++.+++.|+
T Consensus 188 V~ii~~dd~~G~~~~~~~~~~~~~~Gi 214 (479)
T 3sm9_A 188 VSTVASEGDYGETGIEAFEQEARLRNI 214 (479)
T ss_dssp EEEEEESSHHHHHHHHHHHHHHHTTTC
T ss_pred EEEEEecchhhHHHHHHHHHHHHHCCc
Confidence 99999865433 3446677777664
No 400
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=21.04 E-value=94 Score=27.59 Aligned_cols=75 Identities=15% Similarity=0.112 Sum_probs=53.7
Q ss_pred HHHHHhCCcEEEEeCC------chhh-hHHHHhccCCCCeeeccHH-----------------HHHHHHHhcCCCCCCCC
Q 026201 159 VFLEKAGARCIVMPCH------LSHI-WHDEVCKGCSVPFLHVSEC-----------------VAKELKEANMKPLEAGS 214 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCN------TAH~-~~d~l~~~~~vPil~Iid~-----------------t~~~i~~~~~k~~~~~~ 214 (241)
...++.|||-|=++.| |..+ +++.+++.+++|+.-|+.+ -++.+++.|.+
T Consensus 53 ~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~a~~~~~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI~~~~~~GAd------ 126 (287)
T 3iwp_A 53 VNAERGGADRIELCSGLSEGGTTPSMGVLQVVKQSVQIPVFVMIRPRGGDFLYSDREIEVMKADIRLAKLYGAD------ 126 (287)
T ss_dssp HHHHHHTCSEEEECBCGGGTCBCCCHHHHHHHHTTCCSCEEEECCSSSSCSCCCHHHHHHHHHHHHHHHHTTCS------
T ss_pred HHHHHhCCCEEEECCCCCCCCCCCCHHHHHHHHHhcCCCeEEEEecCCCCcccCHHHHHHHHHHHHHHHHcCCC------
Confidence 3467899999999988 3333 4588888889998887653 45566666654
Q ss_pred CCEEEEEecHHHHhhhhHHHHHHhc
Q 026201 215 PLRIGVLAKNAILTAGFYQEKLQHE 239 (241)
Q Consensus 215 ~~rVGLLaT~~T~~s~~Y~~~L~~~ 239 (241)
.-.+|.|-.++++....-++.++..
T Consensus 127 GvVfG~L~~dg~iD~~~~~~Li~~a 151 (287)
T 3iwp_A 127 GLVFGALTEDGHIDKELCMSLMAIC 151 (287)
T ss_dssp EEEECCBCTTSCBCHHHHHHHHHHH
T ss_pred EEEEeeeCCCCCcCHHHHHHHHHHc
Confidence 3356777788888877777766554
No 401
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=21.02 E-value=2.3e+02 Score=24.76 Aligned_cols=55 Identities=5% Similarity=-0.081 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhCCcEEEEe----CCchhhhH---HHHhccC-CCCe-------eeccHHHHHHHHHhcCC
Q 026201 154 LRRKRVFLEKAGARCIVMP----CHLSHIWH---DEVCKGC-SVPF-------LHVSECVAKELKEANMK 208 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIa----CNTAH~~~---d~l~~~~-~vPi-------l~Iid~t~~~i~~~~~k 208 (241)
+.+.++.+++.|||.|.++ .-|...+. +.+++.+ ++|| .++.-+-..++.+.|.+
T Consensus 159 ~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~ 228 (307)
T 1ydo_A 159 VIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGIT 228 (307)
T ss_dssp HHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCC
Confidence 4455567889999999998 34444443 5566666 3554 33444444444556654
No 402
>3qpm_A Peroxiredoxin; oxidoreductase, thioredoxin fold, peroxidase; 1.90A {Larimichthys crocea}
Probab=20.96 E-value=1.7e+02 Score=24.15 Aligned_cols=56 Identities=5% Similarity=0.053 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhc--------cCCCCeeeccHHHHHHHHHhcC
Q 026201 150 IVENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCK--------GCSVPFLHVSECVAKELKEANM 207 (241)
Q Consensus 150 i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~--------~~~vPil~Iid~t~~~i~~~~~ 207 (241)
-...+.+..+.+.+.|+.+|.|.+++.-...+.+++ ..+.|++. |...+..+..++
T Consensus 96 el~~l~~l~~~~~~~gv~vv~Is~D~~~~~~~~~~~~~~~~~~~~~~fp~l~--D~~~~v~~~ygv 159 (240)
T 3qpm_A 96 EIIAFSDRVHEFRAINTEVVACSVDSQFTHLAWIITPRKQGGLGPMKIPLLS--DLTHQISKDYGV 159 (240)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHSCGGGTCCCSCSSCEEE--CTTSHHHHHTTC
T ss_pred HHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHhhcCCCCCceeEEe--CchHHHHHHhCC
Confidence 345566677788888999999999986643333333 34566654 443333444443
No 403
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=20.93 E-value=3.1e+02 Score=22.37 Aligned_cols=28 Identities=4% Similarity=0.078 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEeCC
Q 026201 147 DSLIVENLRRKRVFLEKAGARCIVMPCH 174 (241)
Q Consensus 147 ~~~i~~~l~~~~~~Le~~Gad~IvIaCN 174 (241)
++..++.+.+.++.....||+.|++...
T Consensus 99 r~~~~~~~~~~i~~a~~lGa~~v~~~~g 126 (287)
T 3kws_A 99 RKECMDTMKEIIAAAGELGSTGVIIVPA 126 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEECSC
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEecC
Confidence 3566778888899999999999998653
No 404
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=20.91 E-value=59 Score=30.58 Aligned_cols=65 Identities=5% Similarity=0.032 Sum_probs=42.6
Q ss_pred HHHHHHhCCc-EEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHH
Q 026201 158 RVFLEKAGAR-CIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAI 226 (241)
Q Consensus 158 ~~~Le~~Gad-~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T 226 (241)
++.|++.|++ ++.+|..+.-.+++.+.+.-++.++...++-.....+.|.- .... ...++.|.|+
T Consensus 10 ~~~L~~~GV~~vfg~PG~~~~~l~~al~~~~~i~~v~~~~E~~Aa~~A~Gya---r~tg-~~v~~~TsGp 75 (566)
T 2vbi_A 10 AERLVQIGLKHHFAVAGDYNLVLLDQLLLNKDMKQIYCCNELNCGFSAEGYA---RSNG-AAAAVVTFSV 75 (566)
T ss_dssp HHHHHHHTCSEEEECCCTTTHHHHHHHHTCTTSEEEECSSHHHHHHHHHHHH---HHHS-CEEEEECTTT
T ss_pred HHHHHHcCCCEEEeCCCCccHHHHHHHhcCCCCeEEeeCcHHHHHHHHHHHH---hhcC-CeEEEEeCCC
Confidence 4789999998 56778887778889998765677777776654443332210 0112 4567788775
No 405
>2iel_A Hypothetical protein TT0030; TT0030,thermus thermophilus, structural genomics, PSI, protein structure initiative; 1.60A {Thermus thermophilus} SCOP: c.26.2.4
Probab=20.84 E-value=1e+02 Score=24.53 Aligned_cols=36 Identities=19% Similarity=0.216 Sum_probs=25.8
Q ss_pred HHHHHhC--CcEEEEeCC------chhh-hHHHHhccCCCCeeecc
Q 026201 159 VFLEKAG--ARCIVMPCH------LSHI-WHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 159 ~~Le~~G--ad~IvIaCN------TAH~-~~d~l~~~~~vPil~Ii 195 (241)
..++..| +|-|||.+- +.|. |..+.+. +++|++|+.
T Consensus 90 ~~v~~~~~~~deiIV~T~Ph~vs~~fh~DwasrAr~-~gvPVlhl~ 134 (138)
T 2iel_A 90 EELLAHPGAYQGIVLSTLPPGLSRWLRLDVHTQAER-FGLPVIHVI 134 (138)
T ss_dssp HHHHHSTTSCSEEEEEECCTTTCHHHHTTHHHHGGG-GSSCEEEEE
T ss_pred HHHHhcCCCCceEEEEcCCchHHHHHhccHHHHHHh-cCCCEEEEe
Confidence 3456668 888888753 3332 5577888 999999986
No 406
>2z08_A Universal stress protein family; uncharacterized conserved protein, structural genomics, unknown function, NPPSFA; HET: ATP; 1.55A {Thermus thermophilus} SCOP: c.26.2.4 PDB: 1wjg_A* 2z09_A* 2z3v_A
Probab=20.76 E-value=1.4e+02 Score=21.49 Aligned_cols=17 Identities=24% Similarity=0.008 Sum_probs=12.6
Q ss_pred HHHHHhCCcEEEEeCCc
Q 026201 159 VFLEKAGARCIVMPCHL 175 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCNT 175 (241)
+..++.++|+|||.+..
T Consensus 93 ~~a~~~~~dliV~G~~~ 109 (137)
T 2z08_A 93 QAARAEKADLIVMGTRG 109 (137)
T ss_dssp HHHHHTTCSEEEEESSC
T ss_pred HHHHHcCCCEEEECCCC
Confidence 45567788988888764
No 407
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=20.67 E-value=90 Score=27.49 Aligned_cols=33 Identities=15% Similarity=0.155 Sum_probs=25.5
Q ss_pred CCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 143 VQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 143 ~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
...|++.+.+ .+++|.+.|+|-|++.+.|--.+
T Consensus 27 g~iD~~~l~~----lv~~li~~Gv~gl~v~GtTGE~~ 59 (318)
T 3qfe_A 27 DTLDLASQER----YYAYLARSGLTGLVILGTNAEAF 59 (318)
T ss_dssp TEECHHHHHH----HHHHHHTTTCSEEEESSGGGTGG
T ss_pred CCCCHHHHHH----HHHHHHHcCCCEEEeCccccChh
Confidence 4567766654 44689999999999999988654
No 408
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=20.65 E-value=1.4e+02 Score=24.88 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=26.7
Q ss_pred HHHHHHHHHhCCcEEEEeCCchhh-hHHHHhccCCCCeeec
Q 026201 155 RRKRVFLEKAGARCIVMPCHLSHI-WHDEVCKGCSVPFLHV 194 (241)
Q Consensus 155 ~~~~~~Le~~Gad~IvIaCNTAH~-~~d~l~~~~~vPil~I 194 (241)
.+.++..++.|||+|.+. ++... .+.++.+.+++|++-.
T Consensus 169 ~~~a~~a~~~Gad~i~~~-~~~~~~~l~~i~~~~~ipvva~ 208 (273)
T 2qjg_A 169 AHAARLGAELGADIVKTS-YTGDIDSFRDVVKGCPAPVVVA 208 (273)
T ss_dssp HHHHHHHHHTTCSEEEEC-CCSSHHHHHHHHHHCSSCEEEE
T ss_pred HHHHHHHHHcCCCEEEEC-CCCCHHHHHHHHHhCCCCEEEE
Confidence 344467789999988876 33222 3577777789998754
No 409
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=20.44 E-value=3.1e+02 Score=23.67 Aligned_cols=40 Identities=10% Similarity=0.060 Sum_probs=24.4
Q ss_pred HHHHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCCCeeecc
Q 026201 154 LRRKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSVPFLHVS 195 (241)
Q Consensus 154 l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~vPil~Ii 195 (241)
+.+..+.+++...|+|+.- +...+.-.+.+..++|++.+.
T Consensus 93 ~~~l~~~l~~~~pD~Vi~d--~~~~~~~~~A~~~giP~v~~~ 132 (430)
T 2iyf_A 93 LPQLADAYADDIPDLVLHD--ITSYPARVLARRWGVPAVSLS 132 (430)
T ss_dssp HHHHHHHHTTSCCSEEEEE--TTCHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHhhccCCCEEEEC--CccHHHHHHHHHcCCCEEEEe
Confidence 3444556667789988853 333344555566788876653
No 410
>1jmv_A USPA, universal stress protein A; chaperone; 1.85A {Haemophilus influenzae} SCOP: c.26.2.4
Probab=20.43 E-value=1.2e+02 Score=21.83 Aligned_cols=16 Identities=19% Similarity=0.160 Sum_probs=12.8
Q ss_pred HHHHHhCCcEEEEeCC
Q 026201 159 VFLEKAGARCIVMPCH 174 (241)
Q Consensus 159 ~~Le~~Gad~IvIaCN 174 (241)
+..++.++|+|||.+.
T Consensus 96 ~~a~~~~~dliV~G~~ 111 (141)
T 1jmv_A 96 DAIEQYDVDLLVTGHH 111 (141)
T ss_dssp HHHHHTTCCEEEEEEC
T ss_pred HHHHhcCCCEEEEeCC
Confidence 4556789999999977
No 411
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=20.39 E-value=1.8e+02 Score=22.41 Aligned_cols=43 Identities=12% Similarity=0.072 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeCCchhhhHHHHhc-cCCCCeee
Q 026201 151 VENLRRKRVFLEKAGARCIVMPCHLSHIWHDEVCK-GCSVPFLH 193 (241)
Q Consensus 151 ~~~l~~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~-~~~vPil~ 193 (241)
...+.+..+.+++.|+.+|.|.+++.-...+.+++ ..+.|++.
T Consensus 71 l~~l~~l~~~~~~~~~~vv~Vs~D~~~~~~~~~~~~~~~f~~l~ 114 (179)
T 3ixr_A 71 GLEFNLLLPQFEQINATVLGVSRDSVKSHDSFCAKQGFTFPLVS 114 (179)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEESCCHHHHHHHHHHHTCCSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCceEEEE
Confidence 44566677788889999999999986554333332 35566665
No 412
>1cb0_A Protein (5'-deoxy-5'-methylthioadenosine phosphor; methylthioadenosine phosphorylase, purine nucleoside phospho purine salvage, adenine; HET: ADE; 1.70A {Homo sapiens} SCOP: c.56.2.1 PDB: 1cg6_A* 1k27_A* 1sd1_A* 1sd2_A* 3ozc_A* 3ozd_A* 3oze_A
Probab=20.38 E-value=40 Score=29.12 Aligned_cols=13 Identities=38% Similarity=0.920 Sum_probs=11.4
Q ss_pred CeEEEEeCCChHH
Q 026201 81 NTVGIVGGASVDS 93 (241)
Q Consensus 81 k~IGIIGGmGp~A 93 (241)
.+||||||||.+.
T Consensus 10 ~~igII~gsg~e~ 22 (283)
T 1cb0_A 10 VKIGIIGGTGLDD 22 (283)
T ss_dssp CEEEEEECTTCCC
T ss_pred CCEEEEecCCchh
Confidence 3699999999986
No 413
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=20.37 E-value=1.1e+02 Score=25.92 Aligned_cols=33 Identities=15% Similarity=0.215 Sum_probs=23.4
Q ss_pred CCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchh
Q 026201 145 LDDSLIVENLRRKRVFLEKAGARCIVMPCHLSH 177 (241)
Q Consensus 145 ~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH 177 (241)
.|.+.-++.+.+.++...+.|||+||+|=....
T Consensus 33 ~d~~~N~~~~~~~i~~A~~~gadlvvfPE~~l~ 65 (283)
T 3hkx_A 33 LDPQHNLDLIDDAAARASEQGAQLLLTPELFGF 65 (283)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCSEEECCTTGGG
T ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEcCCCccc
Confidence 455555566666666666789999999966554
No 414
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=20.36 E-value=1.2e+02 Score=26.48 Aligned_cols=34 Identities=15% Similarity=0.083 Sum_probs=25.6
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+. +++|.+.|+|-|++.+.|--.+
T Consensus 31 dg~iD~~~l~~l----v~~li~~Gv~gl~v~GttGE~~ 64 (304)
T 3cpr_A 31 SGDIDIAAGREV----AAYLVDKGLDSLVLAGTTGESP 64 (304)
T ss_dssp TSCBCHHHHHHH----HHHHHHTTCCEEEESSTTTTTT
T ss_pred CCCcCHHHHHHH----HHHHHHcCCCEEEECccccChh
Confidence 456677776554 4689999999999998877654
No 415
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=20.34 E-value=1.6e+02 Score=26.33 Aligned_cols=37 Identities=16% Similarity=0.100 Sum_probs=23.9
Q ss_pred HHHHHHHhCCcEEEEeCCchhh-hHHHHhccCCCCeee
Q 026201 157 KRVFLEKAGARCIVMPCHLSHI-WHDEVCKGCSVPFLH 193 (241)
Q Consensus 157 ~~~~Le~~Gad~IvIaCNTAH~-~~d~l~~~~~vPil~ 193 (241)
.++.|++.|+++|==||..... .+.+|++.+++||..
T Consensus 237 ~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~ 274 (410)
T 2gl5_A 237 FAKAIEKYRIFLYEEPIHPLNSDNMQKVSRSTTIPIAT 274 (410)
T ss_dssp HHHHHGGGCEEEEECSSCSSCHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHhcCCCeEECCCChhhHHHHHHHHhhCCCCEEe
Confidence 3456777888877777653332 346777777787764
No 416
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A* 3qlv_C 3qlu_C* 3qlt_A* 3olz_A*
Probab=20.32 E-value=3.3e+02 Score=23.24 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=23.5
Q ss_pred HHHHhCCcEEEEeCCchhhh-HHHHhccCCCCeee
Q 026201 160 FLEKAGARCIVMPCHLSHIW-HDEVCKGCSVPFLH 193 (241)
Q Consensus 160 ~Le~~Gad~IvIaCNTAH~~-~d~l~~~~~vPil~ 193 (241)
.|.+.|+++|+=|.++.... ...+.+..++|+|+
T Consensus 66 ~l~~~~V~aiiG~~~S~~~~a~~~~~~~~~ip~is 100 (395)
T 3h6g_A 66 DQLSLGVAAIFGPSHSSSANAVQSICNALGVPHIQ 100 (395)
T ss_dssp HHHHHCCSCEECCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred HhhhcCcEEEECCCChhHHHHHHHHHhcCCCCeEe
Confidence 34457999988887776654 35666667777775
No 417
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=20.30 E-value=3.9e+02 Score=22.53 Aligned_cols=65 Identities=12% Similarity=0.025 Sum_probs=37.6
Q ss_pred HHHHHHHHhCCcEEEEeCCchhhhHHHHhccCCC-CeeeccH-------H---HHHHHHHhcCCCCCCCCCCEEEEEecH
Q 026201 156 RKRVFLEKAGARCIVMPCHLSHIWHDEVCKGCSV-PFLHVSE-------C---VAKELKEANMKPLEAGSPLRIGVLAKN 224 (241)
Q Consensus 156 ~~~~~Le~~Gad~IvIaCNTAH~~~d~l~~~~~v-Pil~Iid-------~---t~~~i~~~~~k~~~~~~~~rVGLLaT~ 224 (241)
+.++..++.|||+|-.....----+.++++.+++ |++-+.- . .++.+.+.|. . |+....
T Consensus 163 ~a~~~a~~~GAD~vkt~~~~~~e~~~~~~~~~~~~pV~asGGi~~~~~~~~l~~i~~~~~aGA---------~-Gvsvgr 232 (263)
T 1w8s_A 163 YAARIALELGADAMKIKYTGDPKTFSWAVKVAGKVPVLMSGGPKTKTEEDFLKQVEGVLEAGA---------L-GIAVGR 232 (263)
T ss_dssp HHHHHHHHHTCSEEEEECCSSHHHHHHHHHHTTTSCEEEECCSCCSSHHHHHHHHHHHHHTTC---------C-EEEESH
T ss_pred HHHHHHHHcCCCEEEEcCCCCHHHHHHHHHhCCCCeEEEEeCCCCCCHHHHHHHHHHHHHcCC---------e-EEEEeh
Confidence 3345567899999999953111234666666676 8664421 1 2233334443 2 777777
Q ss_pred HHHhhh
Q 026201 225 AILTAG 230 (241)
Q Consensus 225 ~T~~s~ 230 (241)
..+++.
T Consensus 233 aI~~~~ 238 (263)
T 1w8s_A 233 NVWQRR 238 (263)
T ss_dssp HHHTST
T ss_pred hhcCCc
Confidence 776654
No 418
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=20.26 E-value=98 Score=29.23 Aligned_cols=73 Identities=12% Similarity=0.037 Sum_probs=44.3
Q ss_pred HHHHHHhCCc-EEEEeCCchhhhHHHHhccCCCCeeeccHHHHHHHHHhcCCCCCCCCCCEEEEEecHHHHhhhhHH
Q 026201 158 RVFLEKAGAR-CIVMPCHLSHIWHDEVCKGCSVPFLHVSECVAKELKEANMKPLEAGSPLRIGVLAKNAILTAGFYQ 233 (241)
Q Consensus 158 ~~~Le~~Gad-~IvIaCNTAH~~~d~l~~~~~vPil~Iid~t~~~i~~~~~k~~~~~~~~rVGLLaT~~T~~s~~Y~ 233 (241)
++.|++.|++ ++.+|....-.+++.+.+.-++.++...++-.....+.|.- ...++...++.|.|+=....+-
T Consensus 19 ~~~L~~~GV~~vfg~PG~~~~~l~~al~~~~~i~~i~~~~E~~Aa~~A~Gya---r~tg~p~v~~~TsGpG~~N~~~ 92 (590)
T 1ybh_A 19 VEALERQGVETVFAYPGGASMEIHQALTRSSSIRNVLPRHEQGGVFAAEGYA---RSSGKPGICIATSGPGATNLVS 92 (590)
T ss_dssp HHHHHTTTCCEEEECCCGGGHHHHHHHHHCSSCEECCCSSHHHHHHHHHHHH---HHHSSCEEEEECTTHHHHTTHH
T ss_pred HHHHHHcCCCEEEEcCCCchHHHHHHHhccCCccEEeeCCHHHHHHHHHHHH---HHHCCCEEEEeccCchHHHHHH
Confidence 4789999998 45667766667789997655677777666543332222210 0112256678888775555443
No 419
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=20.22 E-value=2.2e+02 Score=23.93 Aligned_cols=37 Identities=16% Similarity=0.091 Sum_probs=26.5
Q ss_pred HHHHHHh--CCcEEEEeCCchhhhHHHHhccCCCCeeec
Q 026201 158 RVFLEKA--GARCIVMPCHLSHIWHDEVCKGCSVPFLHV 194 (241)
Q Consensus 158 ~~~Le~~--Gad~IvIaCNTAH~~~d~l~~~~~vPil~I 194 (241)
++.|.+. +++.+++-||-......+..+..++|++.+
T Consensus 40 l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~ 78 (229)
T 3auf_A 40 LDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHM 78 (229)
T ss_dssp HHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEEC
T ss_pred HHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEE
Confidence 3455554 678888888876666667778889998753
No 420
>1prx_A HORF6; peroxiredoxin, hydrogen peroxide, redox regulation, cellular signaling, antioxidant; 2.00A {Homo sapiens} SCOP: c.47.1.10
Probab=20.12 E-value=1.9e+02 Score=23.63 Aligned_cols=43 Identities=9% Similarity=0.219 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHhCCcEEEEeCCchhh---hHHHHhc--------cCCCCeee
Q 026201 151 VENLRRKRVFLEKAGARCIVMPCHLSHI---WHDEVCK--------GCSVPFLH 193 (241)
Q Consensus 151 ~~~l~~~~~~Le~~Gad~IvIaCNTAH~---~~d~l~~--------~~~vPil~ 193 (241)
...+.+..+.+++.|+++|.|.+++... |.+.+++ ..+.|++.
T Consensus 51 l~~l~~l~~~f~~~~v~vi~IS~D~~~~~~~~~~~i~~~~~~~~~~~~~fpil~ 104 (224)
T 1prx_A 51 LGRAAKLAPEFAKRNVKLIALSIDSVEDHLAWSKDINAYNSEEPTEKLPFPIID 104 (224)
T ss_dssp HHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSCCCSCCSSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhhCcccccCcCcceee
Confidence 3446666677888999999999998643 4455543 34566654
No 421
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=20.10 E-value=1.1e+02 Score=26.96 Aligned_cols=34 Identities=21% Similarity=0.223 Sum_probs=25.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCchhhh
Q 026201 142 GVQLDDSLIVENLRRKRVFLEKAGARCIVMPCHLSHIW 179 (241)
Q Consensus 142 ~~~~d~~~i~~~l~~~~~~Le~~Gad~IvIaCNTAH~~ 179 (241)
+...|++.+.+. +++|.+.|+|.|++.+.|--.+
T Consensus 27 dg~iD~~~l~~l----v~~li~~Gv~gl~v~GtTGE~~ 60 (314)
T 3d0c_A 27 TREIDWKGLDDN----VEFLLQNGIEVIVPNGNTGEFY 60 (314)
T ss_dssp TCCBCHHHHHHH----HHHHHHTTCSEECTTSGGGTGG
T ss_pred CCCCCHHHHHHH----HHHHHHcCCCEEEECcccCChh
Confidence 356677776554 4689999999999988877654
No 422
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=20.02 E-value=3.6e+02 Score=23.21 Aligned_cols=12 Identities=25% Similarity=0.349 Sum_probs=9.1
Q ss_pred cCCeEEEEeCCCh
Q 026201 79 QANTVGIVGGASV 91 (241)
Q Consensus 79 ~~k~IGIIGGmGp 91 (241)
.+++|+|+|| |.
T Consensus 10 ~~~~ili~g~-g~ 21 (391)
T 1kjq_A 10 AATRVMLLGS-GE 21 (391)
T ss_dssp TCCEEEEESC-SH
T ss_pred CCCEEEEECC-CH
Confidence 4679999976 54
Done!