BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026207
(241 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357160507|ref|XP_003578787.1| PREDICTED: uncharacterized protein ycf45-like [Brachypodium
distachyon]
Length = 388
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 181/210 (86%), Positives = 195/210 (92%), Gaps = 2/210 (0%)
Query: 28 FFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 87
FL RPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+AIG ARRMQVP
Sbjct: 177 LFLG--RPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVP 234
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
EPS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKN
Sbjct: 235 EPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGERLANIIKN 294
Query: 148 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVD 207
P+LSDLIGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVD
Sbjct: 295 PVLSDLIGGVETVTLGDEEARARRTQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVD 354
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 237
MLL GK PLVE+RKRD+ F V+++RW TYD
Sbjct: 355 MLLHGKKPLVEVRKRDNEFQVIIERWATYD 384
>gi|326506502|dbj|BAJ86569.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 179/210 (85%), Positives = 195/210 (92%), Gaps = 2/210 (0%)
Query: 28 FFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 87
FL RPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+AIG ARRMQVP
Sbjct: 176 LFLG--RPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVP 233
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
EPS+QH+VMIEAVENHMPEV+IVDEIGTE+EA ACRSIAERGVMLIGTAHGE L NIIKN
Sbjct: 234 EPSMQHRVMIEAVENHMPEVVIVDEIGTESEAQACRSIAERGVMLIGTAHGERLANIIKN 293
Query: 148 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVD 207
P+LSDL+GGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVD
Sbjct: 294 PVLSDLVGGVETVTLGDEEARARRTQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVD 353
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 237
MLL GK PLVE+RKRD+ F V+++RW TYD
Sbjct: 354 MLLHGKKPLVEVRKRDNEFQVIIERWATYD 383
>gi|15217492|ref|NP_174599.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
gi|12322578|gb|AAG51292.1|AC027035_15 unknown protein [Arabidopsis thaliana]
gi|48596989|gb|AAT46035.1| At1g33290 [Arabidopsis thaliana]
gi|50198961|gb|AAT70483.1| At1g33290 [Arabidopsis thaliana]
gi|332193460|gb|AEE31581.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
Length = 379
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/230 (78%), Positives = 200/230 (86%), Gaps = 4/230 (1%)
Query: 12 VKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDG 71
+ Y L K I L RPGVGKTTV+REIARVLSDEFQKRVVI+DTSNEIGGDG
Sbjct: 154 IDMLYDLLHYGKSI----LFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIGGDG 209
Query: 72 DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 131
DIPHSAIG +RRMQVP+PSLQHKVMIEAVENHMP+VIIVDEIGTEAEA ACRSIAERGVM
Sbjct: 210 DIPHSAIGGSRRMQVPKPSLQHKVMIEAVENHMPQVIIVDEIGTEAEALACRSIAERGVM 269
Query: 132 LIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM 191
LIGTAHGE L+NIIKNP LSDLIGG++TVTLGDEEARARR QKSILERKAPPTFYFLIEM
Sbjct: 270 LIGTAHGEQLQNIIKNPTLSDLIGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEM 329
Query: 192 RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 241
RER YW+ H+TEKSVDMLLRG+ P+VE+R+RD+ + VV++RWK YD I
Sbjct: 330 RERDYWIAHQTEKSVDMLLRGRNPMVEVRRRDEEYKVVIERWKAYDGQGI 379
>gi|77553351|gb|ABA96147.1| expressed protein [Oryza sativa Japonica Group]
Length = 395
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 180/210 (85%), Positives = 194/210 (92%), Gaps = 2/210 (0%)
Query: 28 FFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 87
FL RPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+AIG ARRMQV
Sbjct: 184 LFLG--RPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVA 241
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+PS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKN
Sbjct: 242 QPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGEHLANIIKN 301
Query: 148 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVD 207
P LSDLIGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVD
Sbjct: 302 PTLSDLIGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVD 361
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 237
MLL GK PLVE+RKRD++F VV++RW TYD
Sbjct: 362 MLLHGKKPLVEVRKRDNKFQVVIERWATYD 391
>gi|297846316|ref|XP_002891039.1| hypothetical protein ARALYDRAFT_473506 [Arabidopsis lyrata subsp.
lyrata]
gi|297336881|gb|EFH67298.1| hypothetical protein ARALYDRAFT_473506 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 372 bits (954), Expect = e-101, Method: Compositional matrix adjust.
Identities = 181/230 (78%), Positives = 200/230 (86%), Gaps = 4/230 (1%)
Query: 12 VKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDG 71
+ Y L K I L RPGVGKTTV+REIARVLSDEFQKRVVI+DTSNEIGGDG
Sbjct: 154 IDMLYDLLHYGKSI----LFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIGGDG 209
Query: 72 DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 131
DIPHSAIG +RRMQVP+PSLQHKVMIEAVENHMP+VIIVDEIGTEAEA ACRSIAERGVM
Sbjct: 210 DIPHSAIGGSRRMQVPKPSLQHKVMIEAVENHMPQVIIVDEIGTEAEALACRSIAERGVM 269
Query: 132 LIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM 191
LIGTAHGE L+NIIKNP LSDLIGG++TVTLGDEEARARR QKSILERKAPPTFYFLIEM
Sbjct: 270 LIGTAHGEQLQNIIKNPTLSDLIGGIETVTLGDEEARARRTQKSILERKAPPTFYFLIEM 329
Query: 192 RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 241
RER YW+ H+TEKSVDMLLRG+ P+VE+R+RD+ + VV++RWK YD I
Sbjct: 330 RERDYWIAHQTEKSVDMLLRGRNPMVEVRRRDEEYKVVIERWKAYDGQGI 379
>gi|226531438|ref|NP_001144701.1| uncharacterized protein LOC100277737 [Zea mays]
gi|195645988|gb|ACG42462.1| hypothetical protein [Zea mays]
gi|414865048|tpg|DAA43605.1| TPA: hypothetical protein ZEAMMB73_327805 [Zea mays]
Length = 390
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/210 (85%), Positives = 193/210 (91%), Gaps = 2/210 (0%)
Query: 28 FFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 87
FL RPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGD+PH+AIG ARRMQVP
Sbjct: 179 LFLG--RPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDVPHAAIGGARRMQVP 236
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
EPS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKN
Sbjct: 237 EPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGERLANIIKN 296
Query: 148 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVD 207
P LSDLIGGV+TVTLGD+EARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVD
Sbjct: 297 PTLSDLIGGVETVTLGDDEARARRSQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVD 356
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 237
MLL GK PLVE+RKRD F VV++RW TYD
Sbjct: 357 MLLHGKKPLVEVRKRDSEFQVVIERWATYD 386
>gi|222423588|dbj|BAH19763.1| AT1G33290 [Arabidopsis thaliana]
Length = 379
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 180/230 (78%), Positives = 199/230 (86%), Gaps = 4/230 (1%)
Query: 12 VKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDG 71
+ Y L K I L RPGVGKTTV+REIARVLSDEFQKRVVI+DTSNEI GDG
Sbjct: 154 IDMLYDLLHYGKSI----LFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIEGDG 209
Query: 72 DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 131
DIPHSAIG +RRMQVP+PSLQHKVMIEAVENHMP+VIIVDEIGTEAEA ACRSIAERGVM
Sbjct: 210 DIPHSAIGGSRRMQVPKPSLQHKVMIEAVENHMPQVIIVDEIGTEAEALACRSIAERGVM 269
Query: 132 LIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM 191
LIGTAHGE L+NIIKNP LSDLIGG++TVTLGDEEARARR QKSILERKAPPTFYFLIEM
Sbjct: 270 LIGTAHGEQLQNIIKNPTLSDLIGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEM 329
Query: 192 RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 241
RER YW+ H+TEKSVDMLLRG+ P+VE+R+RD+ + VV++RWK YD I
Sbjct: 330 RERDYWIAHQTEKSVDMLLRGRNPMVEVRRRDEEYKVVIERWKAYDGQGI 379
>gi|222616800|gb|EEE52932.1| hypothetical protein OsJ_35561 [Oryza sativa Japonica Group]
Length = 451
Score = 368 bits (944), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 176/202 (87%), Positives = 190/202 (94%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+AIG ARRMQV +PS+QH
Sbjct: 167 RPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVAQPSMQH 226
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKNP LSDL
Sbjct: 227 RVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGEHLANIIKNPTLSDL 286
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGK 213
IGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVDMLL GK
Sbjct: 287 IGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVDMLLHGK 346
Query: 214 TPLVEIRKRDDRFNVVVDRWKT 235
PLVE+RKRD++F VV++RW T
Sbjct: 347 KPLVEVRKRDNKFQVVIERWAT 368
>gi|218186582|gb|EEC69009.1| hypothetical protein OsI_37798 [Oryza sativa Indica Group]
Length = 484
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 176/202 (87%), Positives = 190/202 (94%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+AIG ARRMQV +PS+QH
Sbjct: 200 RPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVAQPSMQH 259
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKNP LSDL
Sbjct: 260 RVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGEHLANIIKNPTLSDL 319
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGK 213
IGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVDMLL GK
Sbjct: 320 IGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVDMLLHGK 379
Query: 214 TPLVEIRKRDDRFNVVVDRWKT 235
PLVE+RKRD++F VV++RW T
Sbjct: 380 KPLVEVRKRDNKFQVVIERWAT 401
>gi|255557835|ref|XP_002519947.1| Stage III sporulation protein AA, putative [Ricinus communis]
gi|223540993|gb|EEF42551.1| Stage III sporulation protein AA, putative [Ricinus communis]
Length = 412
Score = 365 bits (936), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 173/204 (84%), Positives = 190/204 (93%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTTVMREIARVLSD+ KRVV+VDTSNEIGGDGDIPH+A+G ARRMQVP+PSLQH
Sbjct: 205 RPGVGKTTVMREIARVLSDKLDKRVVVVDTSNEIGGDGDIPHAAVGGARRMQVPDPSLQH 264
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
KVMIEAVENHMPEVIIVDEIGTEAEA ACRSIAERG+MLIGTAHGE LENIIKNP LS+L
Sbjct: 265 KVMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLIGTAHGERLENIIKNPTLSNL 324
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGK 213
IGG++TV LGDEEARARR QKSILERK PPTFYFLIEMRERH+WVTH TEKSVDMLLRG+
Sbjct: 325 IGGIETVILGDEEARARRSQKSILERKGPPTFYFLIEMRERHHWVTHLTEKSVDMLLRGE 384
Query: 214 TPLVEIRKRDDRFNVVVDRWKTYD 237
P VE+R+R+D+F VV++RWK YD
Sbjct: 385 NPSVEVRRRNDQFKVVIERWKAYD 408
>gi|356576569|ref|XP_003556403.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 393
Score = 357 bits (917), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 173/230 (75%), Positives = 197/230 (85%), Gaps = 4/230 (1%)
Query: 12 VKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDG 71
+ Y L K I L RPGVGKTTVMREIARVLSDE KRVVIVDTSNEIGGDG
Sbjct: 168 IDMVYDLLQYGKSI----LFVGRPGVGKTTVMREIARVLSDELHKRVVIVDTSNEIGGDG 223
Query: 72 DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 131
+IPH+AIG ARRMQVPEPS+QH+VMIEAVENHMPEVI+VDEIGTEAEAHACRSIAERG+M
Sbjct: 224 NIPHAAIGGARRMQVPEPSMQHRVMIEAVENHMPEVIVVDEIGTEAEAHACRSIAERGIM 283
Query: 132 LIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM 191
LIGTAHG+ LENIIKNP LSDLIGG+++VTLGD EARAR QK+ILERKAPPTF FLIEM
Sbjct: 284 LIGTAHGQQLENIIKNPTLSDLIGGIESVTLGDAEARARNSQKTILERKAPPTFDFLIEM 343
Query: 192 RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 241
R+RHYW+TH+T+KSVDMLLRG +P VE+RKRD++ VV+++ K YD+ I
Sbjct: 344 RDRHYWLTHQTDKSVDMLLRGISPQVEVRKRDEKCKVVIEKSKAYDKCQI 393
>gi|357504105|ref|XP_003622341.1| F-box protein [Medicago truncatula]
gi|355497356|gb|AES78559.1| F-box protein [Medicago truncatula]
Length = 663
Score = 355 bits (912), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 167/205 (81%), Positives = 192/205 (93%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTTVMREIARVLSDEF KRVVIVDTSNEIGGDG+IPH+AIG ARRMQV EPS+QH
Sbjct: 456 RPGVGKTTVMREIARVLSDEFHKRVVIVDTSNEIGGDGNIPHAAIGGARRMQVSEPSMQH 515
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG+MLIGTAHG+ +EN++KNP LSDL
Sbjct: 516 SVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGIMLIGTAHGQQIENVMKNPTLSDL 575
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGK 213
IGG+++VTLGD EARAR+CQK+ILERKAPPTF FLIEMR+RHYW+TH+T+KSVD+LLRGK
Sbjct: 576 IGGIESVTLGDYEARARKCQKTILERKAPPTFDFLIEMRDRHYWITHQTDKSVDILLRGK 635
Query: 214 TPLVEIRKRDDRFNVVVDRWKTYDR 238
TP VE+RKRD++ VV+++ K YD+
Sbjct: 636 TPQVEVRKRDEKCKVVIEKSKAYDQ 660
>gi|359493523|ref|XP_002264380.2| PREDICTED: uncharacterized protein ycf45-like [Vitis vinifera]
gi|147770825|emb|CAN76429.1| hypothetical protein VITISV_023566 [Vitis vinifera]
Length = 351
Score = 355 bits (911), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/208 (83%), Positives = 191/208 (91%), Gaps = 1/208 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTTVMREIARVLSDE +RVVIVDTSNEIGGDGDIPH+AIG ARRMQVPEPS+QH
Sbjct: 145 RPGVGKTTVMREIARVLSDELNRRVVIVDTSNEIGGDGDIPHAAIGGARRMQVPEPSMQH 204
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
++MIEAVENHMPEVIIVDEIGTEAEA ACRSIAERG+MLIGTAHGE LENIIKNP LSDL
Sbjct: 205 RIMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLIGTAHGERLENIIKNPTLSDL 264
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGK 213
+GG++TVTLGD EARARRCQKSILERKA PTF FLIEMRERHYWVTH T++SVDMLL GK
Sbjct: 265 VGGIETVTLGDAEARARRCQKSILERKALPTFPFLIEMRERHYWVTHWTQRSVDMLLHGK 324
Query: 214 TPLVEIRKRDDRFNVVVDRWKTYDRHDI 241
PLVE+R+R+D+F VV++R TYD +I
Sbjct: 325 RPLVEVRRRNDQFEVVIERG-TYDGSEI 351
>gi|297734733|emb|CBI16967.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 354 bits (908), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/208 (83%), Positives = 191/208 (91%), Gaps = 1/208 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTTVMREIARVLSDE +RVVIVDTSNEIGGDGDIPH+AIG ARRMQVPEPS+QH
Sbjct: 182 RPGVGKTTVMREIARVLSDELNRRVVIVDTSNEIGGDGDIPHAAIGGARRMQVPEPSMQH 241
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
++MIEAVENHMPEVIIVDEIGTEAEA ACRSIAERG+MLIGTAHGE LENIIKNP LSDL
Sbjct: 242 RIMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLIGTAHGERLENIIKNPTLSDL 301
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGK 213
+GG++TVTLGD EARARRCQKSILERKA PTF FLIEMRERHYWVTH T++SVDMLL GK
Sbjct: 302 VGGIETVTLGDAEARARRCQKSILERKALPTFPFLIEMRERHYWVTHWTQRSVDMLLHGK 361
Query: 214 TPLVEIRKRDDRFNVVVDRWKTYDRHDI 241
PLVE+R+R+D+F VV++R TYD +I
Sbjct: 362 RPLVEVRRRNDQFEVVIER-GTYDGSEI 388
>gi|242083132|ref|XP_002441991.1| hypothetical protein SORBIDRAFT_08g006480 [Sorghum bicolor]
gi|241942684|gb|EES15829.1| hypothetical protein SORBIDRAFT_08g006480 [Sorghum bicolor]
Length = 372
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 167/191 (87%), Positives = 178/191 (93%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGD+PH+AIG ARRMQVPE
Sbjct: 178 ILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDVPHAAIGGARRMQVPE 237
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
PS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKNP
Sbjct: 238 PSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGERLANIIKNP 297
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDM 208
LSDLIGGV+TVTLGD+EARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVDM
Sbjct: 298 TLSDLIGGVETVTLGDDEARARRSQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVDM 357
Query: 209 LLRGKTPLVEI 219
LL GK PLVE+
Sbjct: 358 LLHGKKPLVEV 368
>gi|297612841|ref|NP_001066391.2| Os12g0209000 [Oryza sativa Japonica Group]
gi|255670139|dbj|BAF29410.2| Os12g0209000 [Oryza sativa Japonica Group]
Length = 402
Score = 343 bits (880), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 168/191 (87%), Positives = 177/191 (92%), Gaps = 2/191 (1%)
Query: 28 FFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 87
FL RPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+AIG ARRMQV
Sbjct: 184 LFLG--RPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVA 241
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+PS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKN
Sbjct: 242 QPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGEHLANIIKN 301
Query: 148 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVD 207
P LSDLIGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVD
Sbjct: 302 PTLSDLIGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVD 361
Query: 208 MLLRGKTPLVE 218
MLL GK PLVE
Sbjct: 362 MLLHGKKPLVE 372
>gi|302789283|ref|XP_002976410.1| hypothetical protein SELMODRAFT_104906 [Selaginella moellendorffii]
gi|300156040|gb|EFJ22670.1| hypothetical protein SELMODRAFT_104906 [Selaginella moellendorffii]
Length = 403
Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 150/207 (72%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTTV+REIARVL+D+ +KRVV+VDTSNEIGGDGD+PH AIG ARRMQVP+PS+QH
Sbjct: 133 RPGVGKTTVIREIARVLADDLRKRVVVVDTSNEIGGDGDVPHPAIGGARRMQVPDPSMQH 192
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VM+EAVENHMP+V+IVDEIGTEAEA ACR+IAERGVML+ TAHG+ LENIIKNP LSDL
Sbjct: 193 RVMVEAVENHMPQVVIVDEIGTEAEALACRTIAERGVMLVATAHGQTLENIIKNPTLSDL 252
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGK 213
+GG+ TVTLGD+EARAR QK++LERKAPPTF LIEMRER +W+ H+++KSVD LL+GK
Sbjct: 253 VGGIQTVTLGDDEARARGTQKTVLERKAPPTFSILIEMRERSHWIAHQSDKSVDNLLQGK 312
Query: 214 TPLVEIRKRDDRFNVVVDRWKTYDRHD 240
P+VE+R RD+ F VV+++ + YD+ +
Sbjct: 313 QPVVEMRTRDENFRVVIEK-RLYDKEE 338
>gi|302811106|ref|XP_002987243.1| hypothetical protein SELMODRAFT_125482 [Selaginella moellendorffii]
gi|300145140|gb|EFJ11819.1| hypothetical protein SELMODRAFT_125482 [Selaginella moellendorffii]
Length = 403
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 150/207 (72%), Positives = 185/207 (89%), Gaps = 1/207 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTTV+REIARVL+D+ +KRVV+VDTSNEIGGDGD+PH AIG ARRMQVP+PS+QH
Sbjct: 133 RPGVGKTTVIREIARVLADDLRKRVVVVDTSNEIGGDGDVPHPAIGGARRMQVPDPSMQH 192
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VM+EAVENHMP+V+IVDEIGTEAEA ACR+IAERGVML+ TAHG+ LENIIKNP LSDL
Sbjct: 193 RVMVEAVENHMPQVVIVDEIGTEAEALACRTIAERGVMLVATAHGQTLENIIKNPTLSDL 252
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGK 213
+GG+ TVTLGD+EARAR QK++LERKAPPTF LIEMRER +W+ H+++KSVD LL+GK
Sbjct: 253 VGGIQTVTLGDDEARARGTQKTVLERKAPPTFSILIEMRERSHWIAHQSDKSVDNLLQGK 312
Query: 214 TPLVEIRKRDDRFNVVVDRWKTYDRHD 240
P+VE+R RD+ F VV+++ + YD+ +
Sbjct: 313 QPVVEMRTRDENFRVVIEK-RLYDKEE 338
>gi|145347639|ref|XP_001418270.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578499|gb|ABO96563.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 335
Score = 312 bits (799), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 152/205 (74%), Positives = 172/205 (83%), Gaps = 2/205 (0%)
Query: 28 FFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 87
FL RPGVGKTTV+RE+ARVLSDE +KRVVI+DTSNEIGGDGDIPH AIG ARRMQVP
Sbjct: 133 LFLG--RPGVGKTTVIREMARVLSDELKKRVVIIDTSNEIGGDGDIPHPAIGGARRMQVP 190
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+PS+QH+VMIEAVENHMPEVIIVDEIGTEAEA ACR+IAERGV LIGTAHG+ LEN+IKN
Sbjct: 191 DPSMQHRVMIEAVENHMPEVIIVDEIGTEAEALACRTIAERGVQLIGTAHGQLLENLIKN 250
Query: 148 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVD 207
P L+DL+GGV TVTLGD+EARAR CQKSILER+ PPTF LIEM ER+ WV H +SVD
Sbjct: 251 PTLTDLVGGVQTVTLGDDEARARGCQKSILERQGPPTFPILIEMHERNMWVAHNVAESVD 310
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDR 232
+L G P+V++R RD V V R
Sbjct: 311 EVLSGARPVVQLRTRDGEGEVTVHR 335
>gi|255072155|ref|XP_002499752.1| predicted protein [Micromonas sp. RCC299]
gi|226515014|gb|ACO61010.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 308 bits (790), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 150/208 (72%), Positives = 173/208 (83%), Gaps = 7/208 (3%)
Query: 28 FFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 87
FL RPGVGKTTV+REIARVLSDE KRVVI+DTSNEIGGDGDIPH AIG+ARRMQVP
Sbjct: 117 LFLG--RPGVGKTTVIREIARVLSDELGKRVVIIDTSNEIGGDGDIPHRAIGSARRMQVP 174
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+P+LQH++MIEAVENHMPEVIIVDEIGTE EA ACR+IAERGV L+GTAHG+ LEN+IKN
Sbjct: 175 DPALQHQIMIEAVENHMPEVIIVDEIGTEEEAIACRTIAERGVQLVGTAHGQLLENLIKN 234
Query: 148 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVD 207
P L+DL+GGV +VTLGD+EARAR CQK+I+ER+APPTF LIEM ER WV H E+SVD
Sbjct: 235 PTLTDLVGGVQSVTLGDDEARARGCQKTIMERQAPPTFPILIEMHERSMWVAHNVEESVD 294
Query: 208 MLLRGKTPLVEIRKRDD-----RFNVVV 230
+L G P+V++R RD RFN V
Sbjct: 295 EVLAGGRPMVQVRSRDQNTGQVRFNRTV 322
>gi|384251818|gb|EIE25295.1| hypothetical protein COCSUDRAFT_13766, partial [Coccomyxa
subellipsoidea C-169]
Length = 322
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/198 (73%), Positives = 169/198 (85%), Gaps = 5/198 (2%)
Query: 22 NKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA 81
N ++F RPGVGKTTV+RE+AR+LSD+ +KRVVIVDTSNEIGGDGD+PH AIG A
Sbjct: 114 NSVLF-----LGRPGVGKTTVIREMARILSDDLKKRVVIVDTSNEIGGDGDVPHPAIGGA 168
Query: 82 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 141
RRMQVP+PS QHKVM+EAVENHMPE++IVDEIGTEAEA ACR+IAERGV LI TAHG+ L
Sbjct: 169 RRMQVPDPSQQHKVMVEAVENHMPEIVIVDEIGTEAEALACRTIAERGVQLIATAHGQLL 228
Query: 142 ENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK 201
EN++KNP LSDL+GG+ +VTLGDEEARAR QKS+LERKAPPTF +IEMRER YWVTH
Sbjct: 229 ENLLKNPTLSDLVGGIQSVTLGDEEARARGTQKSVLERKAPPTFPLVIEMRERAYWVTHW 288
Query: 202 TEKSVDMLLRGKTPLVEI 219
E SVD LL GK P+V++
Sbjct: 289 VEDSVDCLLHGKVPVVQV 306
>gi|303285736|ref|XP_003062158.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456569|gb|EEH53870.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 570
Score = 301 bits (772), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 149/210 (70%), Positives = 170/210 (80%), Gaps = 4/210 (1%)
Query: 28 FFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 87
FL RPGVGKTTV+RE+ARVLSDE KRVVI+DTSNEIGGDGD+PH AIG ARRMQVP
Sbjct: 206 LFLG--RPGVGKTTVIREMARVLSDELGKRVVIIDTSNEIGGDGDVPHPAIGGARRMQVP 263
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
EPS QHKVMIEAVENHMPEVIIVDEIGTEAEA ACR+IAERGV L+GTAHG+ LEN+I+N
Sbjct: 264 EPSAQHKVMIEAVENHMPEVIIVDEIGTEAEALACRTIAERGVQLVGTAHGQLLENLIQN 323
Query: 148 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVD 207
P L DL+GG+ +VTLGD+EARAR CQK+I+ER P TF +IEM ER +WV H E+SVD
Sbjct: 324 PTLKDLVGGIQSVTLGDDEARARGCQKTIMERAGPATFPIVIEMHERSFWVAHNVEESVD 383
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 237
+L G P+V+ R R D VVV R YD
Sbjct: 384 EILTGGRPMVQTRARKD-GEVVVHR-AVYD 411
>gi|412993135|emb|CCO16668.1| single-stranded nucleic acid binding R3H domain-containing protein
[Bathycoccus prasinos]
Length = 484
Score = 294 bits (752), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 166/210 (79%)
Query: 21 INKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 80
+N+ + L +PGVGKTTV+REIARVLSD+ QKRVVI+DTSNEIGGDGDIPH AIG+
Sbjct: 150 LNRDNGESVLFLGKPGVGKTTVIREIARVLSDDLQKRVVIIDTSNEIGGDGDIPHPAIGS 209
Query: 81 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 140
ARRMQVP PS QHKVMIEAVENH PE+IIVDEIGTE EA ACR+IAERGV LIGTAHG
Sbjct: 210 ARRMQVPNPSEQHKVMIEAVENHTPEIIIVDEIGTEMEALACRTIAERGVQLIGTAHGRL 269
Query: 141 LENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH 200
LEN+IKNP LSDL+GGV TVTLGD+EAR+R CQK+I ER AP TF ++EM R WV H
Sbjct: 270 LENLIKNPTLSDLVGGVTTVTLGDDEARSRGCQKTISERAAPATFPIVVEMHARSMWVEH 329
Query: 201 KTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
E SVD +L G P+V +R RD+ V V
Sbjct: 330 DVEVSVDDILVGNRPVVNLRTRDEEKRVQV 359
>gi|170079165|ref|YP_001735803.1| ATPase like protein [Synechococcus sp. PCC 7002]
gi|169886834|gb|ACB00548.1| ATPase like protein [Synechococcus sp. PCC 7002]
Length = 591
Score = 291 bits (745), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/203 (69%), Positives = 162/203 (79%), Gaps = 1/203 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGDIPHSAIG ARRMQV
Sbjct: 139 ILLLGRPGVGKTTALREIARVLADDFGKRVVIIDTSNEIAGDGDIPHSAIGRARRMQVAT 198
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P LQHKVMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP
Sbjct: 199 PELQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGVQLVGTAHGNRIENLIKNP 258
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVD 207
LSDL+GG+ VTLGDEEAR RR QK++LERKAPPTF +EM ER WV H ++D
Sbjct: 259 TLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQRWVVHSDVSITID 318
Query: 208 MLLRGKTPLVEIRKRDDRFNVVV 230
LLRG PL+E+R DD+ NV +
Sbjct: 319 TLLRGHQPLLEVRTVDDQGNVKI 341
>gi|427723001|ref|YP_007070278.1| single-stranded nucleic acid binding R3H domain-containing protein
[Leptolyngbya sp. PCC 7376]
gi|427354721|gb|AFY37444.1| single-stranded nucleic acid binding R3H domain-containing protein
[Leptolyngbya sp. PCC 7376]
Length = 594
Score = 286 bits (731), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 160/203 (78%), Gaps = 1/203 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGD+PHSAIG ARRMQV
Sbjct: 140 ILLLGRPGVGKTTALREIARVLADDVGKRVVIIDTSNEIAGDGDVPHSAIGRARRMQVAS 199
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P QH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP
Sbjct: 200 PEQQHRVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGVQLVGTAHGNRIENLIKNP 259
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVD 207
LSDL+GG+ VTLGDEEAR RR QK++LERKAPPTF +EM ER WV H+ ++D
Sbjct: 260 TLSDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQKWVVHEDVSITID 319
Query: 208 MLLRGKTPLVEIRKRDDRFNVVV 230
LLRG PL+EIR DD NV V
Sbjct: 320 TLLRGHQPLLEIRTVDDEGNVKV 342
>gi|434386487|ref|YP_007097098.1| hypothetical protein Cha6605_2518 [Chamaesiphon minutus PCC 6605]
gi|428017477|gb|AFY93571.1| hypothetical protein Cha6605_2518 [Chamaesiphon minutus PCC 6605]
Length = 588
Score = 285 bits (730), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 144/237 (60%), Positives = 170/237 (71%), Gaps = 7/237 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A+Y +I D L RPGVGKTT +REIARVL+DE K
Sbjct: 103 RTDEIIGLTCRVGRAVYGTINMIRDLVETGKSILMLGRPGVGKTTALREIARVLADELGK 162
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPHSAIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 163 RVVIIDTSNEIAGDGDIPHSAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTE 222
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG LEN++KNP LSDLIGG+ VTLGDEEAR R QK++
Sbjct: 223 LEALAARTIAERGVQLVGTAHGNRLENLLKNPTLSDLIGGIQAVTLGDEEARRRSSQKTV 282
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
LERKAPPTF +EM ERH WV H + + VD LLRG+ P ++R ++ V + R
Sbjct: 283 LERKAPPTFEIAVEMHERHRWVVHDSVSEMVDTLLRGRQPTTQVRTVNEAGKVSIVR 339
>gi|428768784|ref|YP_007160574.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium aponinum PCC 10605]
gi|428683063|gb|AFZ52530.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium aponinum PCC 10605]
Length = 582
Score = 285 bits (729), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 139/209 (66%), Positives = 165/209 (78%), Gaps = 1/209 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DE +KRVVI+DTSNEI GDGD+PH AIG ARRMQV
Sbjct: 135 ILLLGRPGVGKTTALREIARVLADELEKRVVIIDTSNEIAGDGDVPHPAIGRARRMQVAR 194
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG LEN+IKNP
Sbjct: 195 PELQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNHLENLIKNP 254
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVD 207
LSDLIGG+ +VTLGDEEAR R QK++LERKAPPTF +EM ER WV H+ ++VD
Sbjct: 255 TLSDLIGGIQSVTLGDEEARRRGSQKTVLERKAPPTFEIAVEMWERQKWVVHEDVAQTVD 314
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDRWKTY 236
LLRGK P+ ++R+ +D V + R ++
Sbjct: 315 YLLRGKQPIPQLRQVNDEGEVSITRDPSF 343
>gi|86605726|ref|YP_474489.1| R3H domain-containing protein [Synechococcus sp. JA-3-3Ab]
gi|86554268|gb|ABC99226.1| R3H domain protein [Synechococcus sp. JA-3-3Ab]
Length = 633
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 162/205 (79%), Gaps = 1/205 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DE KRV+I+DTSNEI GDGD+PH IG ARRMQV
Sbjct: 156 MLLLGRPGVGKTTALREIARVLADELHKRVIIIDTSNEIAGDGDVPHPGIGRARRMQVAS 215
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P LQHKVMIEAVENHMPEV+++DEIGTE EA A R+IAERGV L+ TAHG ++N+IKNP
Sbjct: 216 PELQHKVMIEAVENHMPEVVVIDEIGTELEALASRTIAERGVQLVATAHGNRIDNLIKNP 275
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVD 207
LSDLIGG+ +VTLGDEEAR R CQKS+LERKAPPTF +EM ER WV H+ +VD
Sbjct: 276 TLSDLIGGIQSVTLGDEEARRRGCQKSVLERKAPPTFEIAVEMLERDRWVIHEDVAATVD 335
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDR 232
LLR + PLV++R D+R VV++R
Sbjct: 336 RLLRNREPLVQLRSLDERGQVVIER 360
>gi|113476582|ref|YP_722643.1| single-stranded nucleic acid binding R3H [Trichodesmium erythraeum
IMS101]
gi|110167630|gb|ABG52170.1| single-stranded nucleic acid binding R3H [Trichodesmium erythraeum
IMS101]
Length = 590
Score = 282 bits (722), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 159/205 (77%), Gaps = 1/205 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DE +KRVVI+DTSNEI GDGD+PHSAIG ARRMQV
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELEKRVVIIDTSNEIAGDGDVPHSAIGRARRMQVAS 185
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P QH+VMIEAVENH PEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN++KNP
Sbjct: 186 PEQQHRVMIEAVENHTPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLVKNP 245
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVD 207
LSDLIGG+ VTLGD+EAR R QK++LERKAPPTF +EM ERH WV H + +VD
Sbjct: 246 TLSDLIGGIQAVTLGDDEARRRSSQKTVLERKAPPTFEIAVEMLERHRWVVHEQVADTVD 305
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDR 232
LLRGK P E+R DD V + R
Sbjct: 306 ALLRGKKPNPEVRTMDDNGEVKIKR 330
>gi|434391656|ref|YP_007126603.1| single-stranded nucleic acid binding R3H domain-containing protein
[Gloeocapsa sp. PCC 7428]
gi|428263497|gb|AFZ29443.1| single-stranded nucleic acid binding R3H domain-containing protein
[Gloeocapsa sp. PCC 7428]
Length = 582
Score = 282 bits (721), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 142/239 (59%), Positives = 169/239 (70%), Gaps = 7/239 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A+Y +I D L RPGVGKTT +REIARVL+DE K
Sbjct: 94 RTGKIIGLTCRVGRAVYGTIGMIRDLVETGRSILMLGRPGVGKTTALREIARVLADELNK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGD+ H AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDVAHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ VTLGD+EAR RR QK++
Sbjct: 214 LEAMAARTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRRSQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 234
LERKAPPTF +EM ER WV H++ +VD LLRG P ++R DD V V R +
Sbjct: 274 LERKAPPTFEIAVEMLERQRWVVHESVADTVDSLLRGHQPSPQVRTVDDAGKVTVTRQQ 332
>gi|428222285|ref|YP_007106455.1| hypothetical protein Syn7502_02321 [Synechococcus sp. PCC 7502]
gi|427995625|gb|AFY74320.1| hypothetical protein Syn7502_02321 [Synechococcus sp. PCC 7502]
Length = 588
Score = 282 bits (721), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/221 (63%), Positives = 166/221 (75%), Gaps = 7/221 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A+Y + +I DF L RPG+GKTT +REIARVL+DE KRVVI+DT
Sbjct: 107 LTCRIGRAIYGTSAMIRDFVETGKSILLLGRPGMGKTTALREIARVLADEINKRVVIIDT 166
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG +RRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 167 SNEIAGDGDIPHPAIGRSRRMQVATPELQHQVMIEAVENHMPEVIVIDEIGTELEALAAR 226
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV LIGTAHG L N+IKNP LSDL+GG+ +VTLGDEEAR R QKSILERKAPP
Sbjct: 227 TIAERGVQLIGTAHGNQLANLIKNPTLSDLVGGIQSVTLGDEEARRRGTQKSILERKAPP 286
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRD 223
TF IEM ER+ W+ HK +++D LLRG+ P ++R D
Sbjct: 287 TFDIAIEMTERYKWIVHKDVAETIDGLLRGREPAFQVRAVD 327
>gi|254409994|ref|ZP_05023774.1| R3H domain protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196183030|gb|EDX78014.1| R3H domain protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 598
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/237 (59%), Positives = 172/237 (72%), Gaps = 7/237 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R ++ L + A++ +I D L RPGVGKTT +REIARVL+D+ QK
Sbjct: 121 RPGDIIGLTCRVGRAVFGTIGLIHDLVERGQSILMLGRPGVGKTTALREIARVLADDLQK 180
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENH PEVI++DEIGTE
Sbjct: 181 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVSRPELQHQVMIEAVENHTPEVIVIDEIGTE 240
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++
Sbjct: 241 LEALAARTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTV 300
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
LERKAPPTF +EM ER WV H++ +VD LLRG+ P ++R DD+ V++ R
Sbjct: 301 LERKAPPTFEIAVEMLERQRWVVHESVADTVDALLRGRKPNPQMRTVDDQNKVIITR 357
>gi|119512852|ref|ZP_01631918.1| Single-stranded nucleic acid binding R3H [Nodularia spumigena
CCY9414]
gi|119462480|gb|EAW43451.1| Single-stranded nucleic acid binding R3H [Nodularia spumigena
CCY9414]
Length = 578
Score = 281 bits (719), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 136/206 (66%), Positives = 161/206 (78%), Gaps = 1/206 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGD+PH AIG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADDFHKRVVIIDTSNEIAGDGDVPHPAIGRARRMQVAQ 185
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVD 207
LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVIHESVADTVD 305
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDRW 233
LLRG+ P + R DD+ V V R
Sbjct: 306 TLLRGRQPSPQTRTVDDQGKVAVTRQ 331
>gi|302832762|ref|XP_002947945.1| hypothetical protein VOLCADRAFT_57504 [Volvox carteri f.
nagariensis]
gi|300266747|gb|EFJ50933.1| hypothetical protein VOLCADRAFT_57504 [Volvox carteri f.
nagariensis]
Length = 366
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 135/193 (69%), Positives = 161/193 (83%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTTV+REI R L+DE++KRVVIVDTSNEIGGDGD+PH AIG ARRMQV +
Sbjct: 135 VLLLGRPGVGKTTVIREICRTLADEYRKRVVIVDTSNEIGGDGDVPHPAIGGARRMQVAD 194
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
+ QH VMIEAVENHMP+V++VDEIGTEAEA ACR+IAERGV LIGTAHG LEN+IKNP
Sbjct: 195 ATQQHGVMIEAVENHMPQVVVVDEIGTEAEALACRTIAERGVQLIGTAHGCLLENLIKNP 254
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDM 208
L+DL+GGV VTLGDEEAR R QK+ILERKAPPTF ++E+R R+++V H E SVD
Sbjct: 255 TLADLVGGVAAVTLGDEEARTRGTQKTILERKAPPTFPIVVEIRARNFYVAHWVEDSVDQ 314
Query: 209 LLRGKTPLVEIRK 221
LL G+ P+V++R+
Sbjct: 315 LLLGRMPVVQVRR 327
>gi|443316490|ref|ZP_21045932.1| hypothetical protein Lep6406DRAFT_00028420 [Leptolyngbya sp. PCC
6406]
gi|442783923|gb|ELR93821.1| hypothetical protein Lep6406DRAFT_00028420 [Leptolyngbya sp. PCC
6406]
Length = 575
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 140/235 (59%), Positives = 171/235 (72%), Gaps = 7/235 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQK 56
R ++ L + A++ +I D L RPGVGKTT +REIARVL+D+ QK
Sbjct: 88 RSGDIIGLTCRVGRAVFGTIGMIRDLIETGGSILMLGRPGVGKTTALREIARVLADDLQK 147
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV +P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 148 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVAQPELQHQVMIEAVENHMPEVIVIDEIGTE 207
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ +VTLGD+EAR R QKS+
Sbjct: 208 LEATAARTIAERGVQLVGTAHGNRLENLIKNPTLSDLVGGIQSVTLGDDEARRRGSQKSV 267
Query: 177 LERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
LERKAPPTF +EM ER WV H + +VD LLRG+ P ++R+ + V +
Sbjct: 268 LERKAPPTFDIAVEMLERQRWVIHEEVANTVDNLLRGRPPAAQVRETAENGRVTI 322
>gi|22298282|ref|NP_681529.1| hypothetical protein tlr0740 [Thermosynechococcus elongatus BP-1]
gi|22294461|dbj|BAC08291.1| ycf45 [Thermosynechococcus elongatus BP-1]
Length = 567
Score = 281 bits (718), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 145/240 (60%), Positives = 172/240 (71%), Gaps = 11/240 (4%)
Query: 4 LRN----VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDE 53
LRN + L + A++ +I D L RPGVGKTT +REIARVL+DE
Sbjct: 99 LRNRQGTIIGLTCRVGRAVFGTIGMIRDLVESGQSILLLGRPGVGKTTALREIARVLADE 158
Query: 54 FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 113
KRVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMP+VI++DEI
Sbjct: 159 LHKRVVIIDTSNEIAGDGDIPHPAIGKARRMQVARPELQHQVMIEAVENHMPQVIVIDEI 218
Query: 114 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ 173
GTE EA A R+IAERGV LIGTAHG +EN++KNP L+DL+GG+ +VTLGDEEAR R Q
Sbjct: 219 GTELEALAARTIAERGVQLIGTAHGNQIENLMKNPTLADLVGGIQSVTLGDEEARRRGTQ 278
Query: 174 KSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
KS+LERKAPPTF +EM ER WV H SVD+LLRG+ P+ EIR +VV+ R
Sbjct: 279 KSVLERKAPPTFQMAVEMLERDRWVVHLDVAASVDLLLRGRQPVPEIRSIAADGSVVISR 338
>gi|428218066|ref|YP_007102531.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena sp. PCC 7367]
gi|427989848|gb|AFY70103.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena sp. PCC 7367]
Length = 623
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/225 (62%), Positives = 168/225 (74%), Gaps = 7/225 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A+Y +++I D L RPG+GKTT +RE+ARVL+DE KRVVI
Sbjct: 104 VIGLTCRVGRAVYGTSEMIRDLVETGKSILIMGRPGMGKTTALREVARVLADEMDKRVVI 163
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
+DTSNEI GDGDIPH AIG ARRMQV +P LQH+VM+EAVENHMPEVII+DEIGTE EA
Sbjct: 164 IDTSNEIAGDGDIPHPAIGRARRMQVAKPELQHQVMVEAVENHMPEVIIIDEIGTELEAL 223
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+GTAHG L N+IKNP LSDLIGG+ +VTLGD+EAR R QKSILERK
Sbjct: 224 AARTIAERGVQLVGTAHGNKLANLIKNPTLSDLIGGIQSVTLGDDEARRRGTQKSILERK 283
Query: 181 APPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDD 224
APPTF IEM ER+ W H+ ++D LLRG+ P ++IR D+
Sbjct: 284 APPTFEIAIEMGERYRWAVHEDVTSTIDGLLRGREPALQIRALDE 328
>gi|427739198|ref|YP_007058742.1| hypothetical protein Riv7116_5830 [Rivularia sp. PCC 7116]
gi|427374239|gb|AFY58195.1| hypothetical protein Riv7116_5830 [Rivularia sp. PCC 7116]
Length = 581
Score = 280 bits (717), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/240 (58%), Positives = 171/240 (71%), Gaps = 7/240 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ +I D L RPGVGKTTV+REIARVL+D+ K
Sbjct: 94 RTGKIIGLTCRVGRAVHGTISMIRDLVENGQSILMLGRPGVGKTTVLREIARVLADDLDK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGD+PH AIG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDVPHPAIGKARRMQVAHPDQQHQVMIEAVENHMPEVIVIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV LIGTAHG +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++
Sbjct: 214 LEALASRTIAERGVQLIGTAHGNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 235
LERKAPPTF +EM+ER WV H++ ++D LLRG+ P ++R DD V + R T
Sbjct: 274 LERKAPPTFEIAVEMQERQRWVVHESVADTIDNLLRGRQPTPQVRTIDDNGKVAIARHLT 333
>gi|428305288|ref|YP_007142113.1| single-stranded nucleic acid binding R3H domain-containing protein
[Crinalium epipsammum PCC 9333]
gi|428246823|gb|AFZ12603.1| single-stranded nucleic acid binding R3H domain-containing protein
[Crinalium epipsammum PCC 9333]
Length = 589
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 139/237 (58%), Positives = 171/237 (72%), Gaps = 7/237 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R ++ L + A++ +I D L RPGVGKTT +REIARVL+DE K
Sbjct: 103 RTGDIIGLTCRVGRAVFGTIAMIRDLVETGNSILMLGRPGVGKTTALREIARVLADELHK 162
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 163 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTE 222
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++
Sbjct: 223 LEAQAARTIAERGVQLVGTAHGNHIENLIKNPTLSDLVGGIQAVTLGDDEARRRASQKTV 282
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
LERKAPPTF +EM ERH WV H++ +VD LLR + P ++R ++ +V + R
Sbjct: 283 LERKAPPTFEIAVEMLERHRWVVHESVSDTVDTLLRNRKPSPQVRTVNESGHVTITR 339
>gi|307155037|ref|YP_003890421.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Cyanothece sp. PCC 7822]
gi|306985265|gb|ADN17146.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 7822]
Length = 605
Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 139/240 (57%), Positives = 174/240 (72%), Gaps = 7/240 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ +I D L RPGVGKTT +REIARVL+D++ K
Sbjct: 125 RTGEIIGLTCRIGRAIFGTISMIEDLVETGQSILMLGRPGVGKTTALREIARVLADDYNK 184
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 185 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTE 244
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ VTLGDEEAR R QK++
Sbjct: 245 LEALAARTIAERGVQLVGTAHGNRIENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTV 304
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 235
LERKAPPTF +EM ER WV H+ ++VD LLRG+ P++++R D+ V + + ++
Sbjct: 305 LERKAPPTFQIAVEMLERQRWVVHEDVAETVDNLLRGREPVLQVRTVDEHGEVKITQEES 364
>gi|411119520|ref|ZP_11391900.1| hypothetical protein OsccyDRAFT_3443 [Oscillatoriales
cyanobacterium JSC-12]
gi|410711383|gb|EKQ68890.1| hypothetical protein OsccyDRAFT_3443 [Oscillatoriales
cyanobacterium JSC-12]
Length = 661
Score = 280 bits (715), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 137/210 (65%), Positives = 162/210 (77%), Gaps = 1/210 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+PH AIG ARRMQV
Sbjct: 176 ILMLGRPGVGKTTALREIARVLADELDKRVVIIDTSNEIAGDGDVPHPAIGRARRMQVAR 235
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKNP
Sbjct: 236 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRLENLIKNP 295
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVD 207
LSDL+GG+ +VTLGDEEAR R QKS+LERKAPPTF +EM ER WV H+ +++D
Sbjct: 296 TLSDLVGGIQSVTLGDEEARRRGSQKSVLERKAPPTFDIAVEMLERQRWVVHEHVAETID 355
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 237
LLRG+ P ++R +D VV+ + D
Sbjct: 356 SLLRGRQPNPQVRTINDVGKVVITHELSSD 385
>gi|409992005|ref|ZP_11275221.1| single-stranded nucleic acid binding R3H [Arthrospira platensis
str. Paraca]
gi|291568683|dbj|BAI90955.1| Ycf45 protein [Arthrospira platensis NIES-39]
gi|409937126|gb|EKN78574.1| single-stranded nucleic acid binding R3H [Arthrospira platensis
str. Paraca]
Length = 592
Score = 279 bits (714), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 144/242 (59%), Positives = 174/242 (71%), Gaps = 9/242 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R V L + A++ +I D L RPGVGKTT +REIARVL+DE K
Sbjct: 94 RTGKVIGLTCRVGRAVFGKIGMIRDLVETGGSILMLGRPGVGKTTALREIARVLADELHK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVASPELQHQVMIEAVENHMPEVIVIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+I+ERGV LIGTAHG +EN++KNP L+DLIGG+ VTLGD+EAR R QK++
Sbjct: 214 LEALAARTISERGVQLIGTAHGNRIENLMKNPTLADLIGGIQAVTLGDDEARRRGSQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVV--DRW 233
LERKAPPTF IEM ER WV H++ +VD LLRG P +++R+ +DR V V +R+
Sbjct: 274 LERKAPPTFDIAIEMLERERWVVHESVSTTVDGLLRGMQPTLQVRQMNDRGEVTVTQERY 333
Query: 234 KT 235
T
Sbjct: 334 ST 335
>gi|209525857|ref|ZP_03274392.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira maxima CS-328]
gi|376002076|ref|ZP_09779925.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|423062006|ref|ZP_17050796.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira platensis C1]
gi|209493666|gb|EDZ93986.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira maxima CS-328]
gi|375329564|emb|CCE15678.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|406716579|gb|EKD11728.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira platensis C1]
Length = 592
Score = 279 bits (714), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 138/210 (65%), Positives = 164/210 (78%), Gaps = 3/210 (1%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAS 185
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+I+ERGV LIGTAHG +EN++KNP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTISERGVQLIGTAHGNRIENLMKNP 245
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVD 207
L+DLIGG+ VTLGD+EAR R QK++LERKAPPTF IEM ER WV H++ +VD
Sbjct: 246 TLADLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFDIAIEMLERERWVVHESVSTTVD 305
Query: 208 MLLRGKTPLVEIRKRDDRFNVVV--DRWKT 235
LLRG P +++R+ +DR V V +R+ T
Sbjct: 306 GLLRGMQPTLQVRQMNDRGEVTVTQERYST 335
>gi|428203424|ref|YP_007082013.1| hypothetical protein Ple7327_3231 [Pleurocapsa sp. PCC 7327]
gi|427980856|gb|AFY78456.1| hypothetical protein Ple7327_3231 [Pleurocapsa sp. PCC 7327]
Length = 583
Score = 278 bits (712), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 159/203 (78%), Gaps = 1/203 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DEF KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 135 ILLLGRPGVGKTTALREIARVLADEFHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 194
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P LQH+VMIEAVENHMPE+I++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP
Sbjct: 195 PELQHQVMIEAVENHMPEIIVIDEIGTELEAMAARTIAERGVQLVGTAHGNRIENLIKNP 254
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVD 207
LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ +VD
Sbjct: 255 TLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWVVHEDVANTVD 314
Query: 208 MLLRGKTPLVEIRKRDDRFNVVV 230
LLRG+ P +++R D+ V +
Sbjct: 315 DLLRGREPTLQVRTIDENGRVTI 337
>gi|332711942|ref|ZP_08431872.1| hypothetical protein LYNGBM3L_69500 [Moorea producens 3L]
gi|332349270|gb|EGJ28880.1| hypothetical protein LYNGBM3L_69500 [Moorea producens 3L]
Length = 647
Score = 278 bits (712), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 158/205 (77%), Gaps = 1/205 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 196 ILMLGRPGVGKTTALREIARVLADELDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAS 255
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+GTAHG +EN+IKNP
Sbjct: 256 PEHQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVGTAHGNRIENLIKNP 315
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVD 207
LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD
Sbjct: 316 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERKRWVVHESVADTVD 375
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDR 232
LLRG+ P +R D+ V + R
Sbjct: 376 NLLRGRQPNPPVRTEDENGKVTITR 400
>gi|218441457|ref|YP_002379786.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. PCC 7424]
gi|218174185|gb|ACK72918.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 7424]
Length = 605
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 139/235 (59%), Positives = 171/235 (72%), Gaps = 7/235 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ +I D L RPGVGKTT +REIARVL+D++ K
Sbjct: 125 RTGEIIGLTCRIGRAIFGTIAMIEDLVETGQSILMLGRPGVGKTTALREIARVLADDYNK 184
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 185 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTE 244
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG ++N+IKNP LSDL+GG+ VTLGDEEAR R QK++
Sbjct: 245 LEALAARTIAERGVQLVGTAHGNRIDNLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTV 304
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
LERKAPPTF +EM ER WV H+ ++VD LLRG+ P+++IR D+ V +
Sbjct: 305 LERKAPPTFEIAVEMLERQRWVVHEDVAETVDNLLRGREPILQIRTVDENGEVQI 359
>gi|428774384|ref|YP_007166172.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium stanieri PCC 7202]
gi|428688663|gb|AFZ48523.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium stanieri PCC 7202]
Length = 580
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/205 (66%), Positives = 162/205 (79%), Gaps = 1/205 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DE +KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 135 ILLLGRPGVGKTTALREIARVLADELEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 194
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG LEN+IKNP
Sbjct: 195 PELQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNHLENLIKNP 254
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVD 207
LSDLIGG+ +VTLGD+EAR R QK++LERKAPPTF +EM ER WV H + ++VD
Sbjct: 255 TLSDLIGGIQSVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMWERQKWVVHEEVAQTVD 314
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDR 232
+LRG+ + ++R+ DD V + R
Sbjct: 315 NILRGRQIIPQLRQVDDEGKVSITR 339
>gi|443327493|ref|ZP_21056117.1| hypothetical protein Xen7305DRAFT_00020990 [Xenococcus sp. PCC
7305]
gi|442792922|gb|ELS02385.1| hypothetical protein Xen7305DRAFT_00020990 [Xenococcus sp. PCC
7305]
Length = 584
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 140/235 (59%), Positives = 170/235 (72%), Gaps = 7/235 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQK 56
R ++ L + A++ +I D L RPGVGKTT +REIARVL+D+ +K
Sbjct: 104 RAGDIIGLTCRIGRAVFGTIVMIRDLIETGGSILLLGRPGVGKTTALREIARVLADDLEK 163
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 164 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTE 223
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGD+EAR R QK++
Sbjct: 224 LEALAARTIAERGVQLVGTAHGNALENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTV 283
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
LERKAPPTF +EM ER W+ H+ T +++D LLRG P +IR DD V +
Sbjct: 284 LERKAPPTFAIAVEMLERQKWIVHEDTAQTIDSLLRGIEPGSQIRTVDDSGEVSI 338
>gi|87124959|ref|ZP_01080806.1| hypothetical protein RS9917_03118 [Synechococcus sp. RS9917]
gi|86167279|gb|EAQ68539.1| hypothetical protein RS9917_03118 [Synechococcus sp. RS9917]
Length = 547
Score = 277 bits (709), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 161/217 (74%), Gaps = 7/217 (3%)
Query: 6 NVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVV 59
+V L + A++ ++ D L RPGVGKTT +REIARVL+DE +KRVV
Sbjct: 100 DVVGLTCRVGRAVFGTVALVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADELEKRVV 159
Query: 60 IVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 119
++DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 160 VIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEA 219
Query: 120 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILER 179
A R+IAERGVML+ TAHG L N+IKNP L DL+GG+++VTLGDEEAR RR QK++LER
Sbjct: 220 QAARTIAERGVMLVATAHGNALANLIKNPTLCDLVGGIESVTLGDEEARRRRSQKTVLER 279
Query: 180 KAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTP 215
A PTF +EM RH W H ++VD+LLRG+TP
Sbjct: 280 AAEPTFPLAVEMHSRHRWAVHADVGRTVDLLLRGQTP 316
>gi|300863790|ref|ZP_07108717.1| single-stranded nucleic acid binding R3H [Oscillatoria sp. PCC
6506]
gi|300338218|emb|CBN53863.1| single-stranded nucleic acid binding R3H [Oscillatoria sp. PCC
6506]
Length = 586
Score = 277 bits (708), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 139/237 (58%), Positives = 172/237 (72%), Gaps = 7/237 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R V L ++ A++ +I D L RPGVGKTT +REIARVL+D+ +K
Sbjct: 94 RTGEVIGLTLRVGRAVFGTIGLIRDLVETGQSILLLGRPGVGKTTALREIARVLADDLEK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVSHPEFQHQVMIEAVENHMPEVIVIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG LEN++KNP L+DLIGG+ VTLGD+EAR R QK++
Sbjct: 214 LEALAARTIAERGVQLVGTAHGNRLENLVKNPTLADLIGGIQAVTLGDDEARRRGSQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
LERKAPPTF +EM ER WV H+ ++VD+LLRG+ P +++R D V+V +
Sbjct: 274 LERKAPPTFEIAVEMLERQRWVIHEHVSETVDILLRGRQPNLQVRSIGDSGEVIVSQ 330
>gi|443310712|ref|ZP_21040354.1| hypothetical protein Syn7509DRAFT_00032120 [Synechocystis sp. PCC
7509]
gi|442779237|gb|ELR89488.1| hypothetical protein Syn7509DRAFT_00032120 [Synechocystis sp. PCC
7509]
Length = 576
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 138/225 (61%), Positives = 164/225 (72%), Gaps = 7/225 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ +I D L RPGVGKTT +REIARVL+DE K
Sbjct: 94 RTGKIIGLTCRVGRAVFGTIDMIRDLVGTGQSILMLGRPGVGKTTALREIARVLADELNK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDI H AIG ARRMQV P LQH+VMIEAVENHMPE I++DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDITHPAIGRARRMQVSRPELQHQVMIEAVENHMPEAIVIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ VTLGDEEAR RR QK++
Sbjct: 214 LEAMAARTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQAVTLGDEEARRRRSQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIR 220
LERKAPPTF +EM+ER WV H++ +VD LLRGK P ++R
Sbjct: 274 LERKAPPTFEIAVEMQERQRWVIHESVADTVDNLLRGKPPTPQVR 318
>gi|440684212|ref|YP_007159007.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena cylindrica PCC 7122]
gi|428681331|gb|AFZ60097.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena cylindrica PCC 7122]
Length = 579
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 139/238 (58%), Positives = 169/238 (71%), Gaps = 7/238 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ +I D L RPGVGKTT +REIARVL+D+F K
Sbjct: 94 RTGKIIGLTCRVGRAVFGTIGMIRDLVETGKSILMLGRPGVGKTTALREIARVLADDFNK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDI H AIG ARRMQV +P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDIAHPAIGRARRMQVAKPELQHQVMIEAVENHMPEVIVIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN+IKNP L DL+GG+ VTLGD+EAR R QK++
Sbjct: 214 LEALAARTIAERGVQLVGTAHGNQIENLIKNPTLCDLVGGIQAVTLGDDEARRRGSQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRW 233
LERKAPPTF +EM ER WV H+T +VD LLRG+ P + R D++ V + R
Sbjct: 274 LERKAPPTFEIAVEMLERQRWVVHETVADTVDTLLRGRQPNPQTRTVDEKGKVAISRQ 331
>gi|427705776|ref|YP_007048153.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nostoc sp. PCC 7107]
gi|427358281|gb|AFY41003.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nostoc sp. PCC 7107]
Length = 578
Score = 276 bits (707), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 141/241 (58%), Positives = 170/241 (70%), Gaps = 9/241 (3%)
Query: 2 LRLRN--VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDE 53
+R RN + L + A++ +I D L RPGVGKTT +REIARVL+DE
Sbjct: 91 IRNRNGKIIGLTCRVGRAIFGTISMIRDLVETGKSILMLGRPGVGKTTALREIARVLADE 150
Query: 54 FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 113
KRVVI+DTSNEI GDGD+ H AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEI
Sbjct: 151 LNKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAHPELQHQVMIEAVENHMPEVIVIDEI 210
Query: 114 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ 173
GTE EA A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ VTLGD+EAR R Q
Sbjct: 211 GTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQ 270
Query: 174 KSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
K++LERKAPPTF +EM ER WV H++ +VD LLRG+ P + R DD V + R
Sbjct: 271 KTVLERKAPPTFEIAVEMLERQRWVVHESVADTVDTLLRGRQPSPQTRTVDDNGKVAMTR 330
Query: 233 W 233
Sbjct: 331 Q 331
>gi|428213099|ref|YP_007086243.1| hypothetical protein Oscil6304_2716 [Oscillatoria acuminata PCC
6304]
gi|428001480|gb|AFY82323.1| hypothetical protein Oscil6304_2716 [Oscillatoria acuminata PCC
6304]
Length = 615
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 158/205 (77%), Gaps = 1/205 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 155 ILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAA 214
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P QHKVMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP
Sbjct: 215 PEFQHKVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 274
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVD 207
L DL+GG+ +VTLGDEEAR R QK++LERKAPPTF +EM ER WV H + ++VD
Sbjct: 275 TLCDLVGGIQSVTLGDEEARRRGSQKTVLERKAPPTFEIAVEMSERKRWVVHERVAETVD 334
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDR 232
LLRG+ P +++R + V + +
Sbjct: 335 SLLRGRQPDLQVRTVSESGKVTITK 359
>gi|75906351|ref|YP_320647.1| single-stranded nucleic acid binding R3H [Anabaena variabilis ATCC
29413]
gi|75700076|gb|ABA19752.1| Single-stranded nucleic acid binding R3H [Anabaena variabilis ATCC
29413]
Length = 579
Score = 276 bits (707), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/206 (65%), Positives = 158/206 (76%), Gaps = 1/206 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H AIG ARRMQV
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAH 185
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVD 207
LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVD 305
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDRW 233
LLRG+ P + R DD+ V + R
Sbjct: 306 TLLRGRQPSPQTRTVDDQGKVAITRQ 331
>gi|119484836|ref|ZP_01619318.1| Single-stranded nucleic acid binding R3H [Lyngbya sp. PCC 8106]
gi|119457654|gb|EAW38778.1| Single-stranded nucleic acid binding R3H [Lyngbya sp. PCC 8106]
Length = 582
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 143/242 (59%), Positives = 173/242 (71%), Gaps = 9/242 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R V L + A++ +I D L RPGVGKTT +REIARVL+DE K
Sbjct: 94 RTGKVIGLTCRVGRAVFGKVGMIRDLVETGQSILMLGRPGVGKTTALREIARVLADELSK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV LIGTAHG +EN++KNP L+DLIGG+ VTLGDEEAR R QK++
Sbjct: 214 LEAIAARTIAERGVQLIGTAHGNRIENLMKNPTLADLIGGIQAVTLGDEEARRRGSQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKTEKS-VDMLLRGKTPLVEIRKRDD--RFNVVVDRW 233
LERKAPPTF IEM ER WV H++ S +D LLRG P +++R D+ ++V +R+
Sbjct: 274 LERKAPPTFEIAIEMLERDRWVVHESVASTIDSLLRGMQPTLQVRTMDEAGEVSMVEERY 333
Query: 234 KT 235
+
Sbjct: 334 NS 335
>gi|159488761|ref|XP_001702371.1| hypothetical protein CHLREDRAFT_108035 [Chlamydomonas reinhardtii]
gi|158271165|gb|EDO96991.1| predicted protein [Chlamydomonas reinhardtii]
Length = 308
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/192 (69%), Positives = 158/192 (82%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTTV+RE+ L+DE++KRVVIVDTSNEIGGDGD+PH AIG ARRMQV +
Sbjct: 117 VLLLGRPGVGKTTVIREMCATLADEYRKRVVIVDTSNEIGGDGDVPHPAIGGARRMQVAD 176
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
QH VMIEAVENHMP+V++VDEIGTEAEA ACR+IAERGV LIGTAHG LEN+IKNP
Sbjct: 177 ALQQHAVMIEAVENHMPQVVVVDEIGTEAEALACRTIAERGVQLIGTAHGCLLENLIKNP 236
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDM 208
LSDL+GGV VTLGDEEAR R QK+ILERKAPPTF ++E+R R+++V H E SVD
Sbjct: 237 TLSDLVGGVAPVTLGDEEARLRGTQKTILERKAPPTFPIVVEIRARNFYVAHWVEDSVDQ 296
Query: 209 LLRGKTPLVEIR 220
LL G+ P+V++R
Sbjct: 297 LLLGRMPVVQVR 308
>gi|37523337|ref|NP_926714.1| hypothetical protein gvip509 [Gloeobacter violaceus PCC 7421]
gi|35214341|dbj|BAC91709.1| ycf45 [Gloeobacter violaceus PCC 7421]
Length = 535
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 138/205 (67%), Positives = 159/205 (77%), Gaps = 1/205 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 126 ILLLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 185
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG L+N+IKNP
Sbjct: 186 PEYQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNKLDNLIKNP 245
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVD 207
LSDLIGG+ TVTLGDEEAR R QKS+LERKAPPTF +EM+ER+ W+ HK ++VD
Sbjct: 246 TLSDLIGGIQTVTLGDEEARRRGTQKSVLERKAPPTFEIAVEMQERYKWIVHKDVAETVD 305
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDR 232
LLR + PL E R + V V R
Sbjct: 306 YLLRDRKPLPETRALNGAGKVSVTR 330
>gi|282897384|ref|ZP_06305386.1| Single-stranded nucleic acid binding R3H [Raphidiopsis brookii D9]
gi|281198036|gb|EFA72930.1| Single-stranded nucleic acid binding R3H [Raphidiopsis brookii D9]
Length = 573
Score = 276 bits (706), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 142/243 (58%), Positives = 174/243 (71%), Gaps = 9/243 (3%)
Query: 2 LRLRN--VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDE 53
+R RN + L + A++ +I D L RPGVGKTT +REIARVL+D+
Sbjct: 90 IRNRNGKIIGLTCRVGRAVFGTIGMIRDLVETGKSILMLGRPGVGKTTALREIARVLADD 149
Query: 54 FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 113
KRV+I+DTSNEI GDGDI H AIG ARRMQV P LQH+VMIEAVENHMPEVII+DEI
Sbjct: 150 LHKRVIIIDTSNEIAGDGDIAHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIIIDEI 209
Query: 114 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ 173
GTE EA A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ VTLGD+EAR RR Q
Sbjct: 210 GTELEALASRTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRRSQ 269
Query: 174 KSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
K++LERKAPPTF +EM ER WV H++ ++VD LLRG+ P + R D++ V + R
Sbjct: 270 KTVLERKAPPTFEIAVEMLERERWVVHESVAETVDTLLRGRQPNPQTRTVDEQGKVSIAR 329
Query: 233 WKT 235
T
Sbjct: 330 PLT 332
>gi|427730839|ref|YP_007077076.1| hypothetical protein Nos7524_3698 [Nostoc sp. PCC 7524]
gi|427366758|gb|AFY49479.1| hypothetical protein Nos7524_3698 [Nostoc sp. PCC 7524]
Length = 578
Score = 276 bits (706), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 140/238 (58%), Positives = 168/238 (70%), Gaps = 7/238 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ +I D L RPGVGKTT +REIARVL+DE K
Sbjct: 94 RTGKIIGLTCRVGRAVFGTIGMIRDLVETGKSILMLGRPGVGKTTALREIARVLADELNK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGD+ H AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDVAHPAIGRARRMQVAHPELQHQVMIEAVENHMPEVIVIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++
Sbjct: 214 LEALAARTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRW 233
LERKAPPTF +EM ER WV H++ +VD LLRG+ P + R DD+ V V R
Sbjct: 274 LERKAPPTFEIAVEMLERQRWVVHESVADTVDTLLRGRQPNPQTRTVDDQGKVSVTRQ 331
>gi|126659203|ref|ZP_01730341.1| hypothetical protein CY0110_04488 [Cyanothece sp. CCY0110]
gi|126619508|gb|EAZ90239.1| hypothetical protein CY0110_04488 [Cyanothece sp. CCY0110]
Length = 576
Score = 276 bits (705), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 139/235 (59%), Positives = 168/235 (71%), Gaps = 7/235 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R ++ L + A++ +I D L RPGVGKTT +REIARVL+D+F K
Sbjct: 94 RTGDIIGLTCRVGRAVFGTISMIRDLVETGQSLLLLGRPGVGKTTALREIARVLADDFDK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P LQHKVMIEAVENHMPEVI++DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVAAPELQHKVMIEAVENHMPEVIVIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN++KNP LSDL+GG+ VTLGD+EAR R QK++
Sbjct: 214 LEALAARTIAERGVQLVGTAHGNQIENLMKNPTLSDLVGGIQAVTLGDDEARRRGSQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
LERKAPPTF IEM ER WV H ++D+LLR P ++R D+ NV +
Sbjct: 274 LERKAPPTFEIAIEMLERQKWVVHDDVAYTIDILLRNGQPNPQVRTVDENGNVQI 328
>gi|318042567|ref|ZP_07974523.1| ATPase [Synechococcus sp. CB0101]
Length = 556
Score = 276 bits (705), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 133/228 (58%), Positives = 167/228 (73%), Gaps = 7/228 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ ++ D L RPGVGKTT +REIARVL+DE K
Sbjct: 102 RTGTIVGLTCRVGRAVFGTVAMVRDLMDSGQSLLLMGRPGVGKTTALREIARVLADELGK 161
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVV++DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 162 RVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTE 221
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGVML+ TAHG L N++KNP LSDL+GG+++VTLGDEEAR RR QK++
Sbjct: 222 LEAQAARTIAERGVMLVATAHGNELANLVKNPTLSDLVGGIESVTLGDEEARRRRSQKTV 281
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRD 223
LER A PTF +EM R+ W+ H+ ++VD+LLRG+ P ++R+ D
Sbjct: 282 LERAAEPTFPLAVEMHTRNRWLVHRDVARTVDLLLRGQLPRPQVRELD 329
>gi|166367800|ref|YP_001660073.1| hypothetical protein MAE_50590 [Microcystis aeruginosa NIES-843]
gi|166090173|dbj|BAG04881.1| hypothetical protein MAE_50590 [Microcystis aeruginosa NIES-843]
Length = 603
Score = 276 bits (705), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 165/228 (72%), Gaps = 7/228 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI+DT
Sbjct: 132 LTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDT 191
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 192 SNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAAR 251
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPP
Sbjct: 252 TIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPP 311
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
TF IEM ER WV H+ ++D LLRG+ + +IR D+ V V
Sbjct: 312 TFEIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 359
>gi|425464557|ref|ZP_18843867.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389833423|emb|CCI22104.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 581
Score = 275 bits (704), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 140/231 (60%), Positives = 166/231 (71%), Gaps = 7/231 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
+ L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI
Sbjct: 107 IIGLTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVI 166
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 167 IDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEAL 226
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERK
Sbjct: 227 AARTIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERK 286
Query: 181 APPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
APPTF IEM ER WV H+ ++D LLRG+ + +IR D+ V V
Sbjct: 287 APPTFEIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 337
>gi|428316917|ref|YP_007114799.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillatoria nigro-viridis PCC 7112]
gi|428240597|gb|AFZ06383.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillatoria nigro-viridis PCC 7112]
Length = 588
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 140/240 (58%), Positives = 173/240 (72%), Gaps = 11/240 (4%)
Query: 4 LRN----VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDE 53
LRN + L ++ A++ II D L RPGVGKTT +REIARVL+D+
Sbjct: 91 LRNRSGEIIGLTLRVGRAVFGTIGIIRDLVETGQSILMLGRPGVGKTTALREIARVLADD 150
Query: 54 FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 113
+KRVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEI
Sbjct: 151 LEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEI 210
Query: 114 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ 173
GTE EA A R+IAERGV L+GTAHG LEN++KNP L+DLIGG+ VTLGD+EAR R Q
Sbjct: 211 GTELEALAARTIAERGVQLVGTAHGNRLENLMKNPTLADLIGGIQAVTLGDDEARRRGSQ 270
Query: 174 KSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
K++LERK+PPTF +EM ER WV H + S+D LLRG+ P +IR + V++++
Sbjct: 271 KTVLERKSPPTFEIAVEMLERQRWVIHERVADSIDTLLRGREPNQQIRSVSETGEVIIEQ 330
>gi|354567011|ref|ZP_08986181.1| single-stranded nucleic acid binding R3H domain-containing protein
[Fischerella sp. JSC-11]
gi|353543312|gb|EHC12770.1| single-stranded nucleic acid binding R3H domain-containing protein
[Fischerella sp. JSC-11]
Length = 577
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 141/243 (58%), Positives = 171/243 (70%), Gaps = 9/243 (3%)
Query: 2 LRLRN--VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDE 53
+R RN + L + A++ +I D L RPGVGKTT +REIARVL+DE
Sbjct: 91 IRNRNGKIIGLTCRVGRAVFGTIGMIRDLVETGKSILMLGRPGVGKTTALREIARVLADE 150
Query: 54 FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 113
KRVVI+DTSNEI GDGD+PH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEI
Sbjct: 151 LNKRVVIIDTSNEIAGDGDVPHPAIGKARRMQVAHPELQHQVMIEAVENHMPEVIVIDEI 210
Query: 114 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ 173
GT EA A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ VTLGD+EAR R Q
Sbjct: 211 GTALEALAARTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQ 270
Query: 174 KSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
K++LERKAPPTF +EM ER WV H++ +VD LLRG P ++R D+ V + R
Sbjct: 271 KTVLERKAPPTFEIAVEMLERQRWVVHESVSDTVDSLLRGHQPSPQVRTVDESGKVKITR 330
Query: 233 WKT 235
T
Sbjct: 331 QLT 333
>gi|428200832|ref|YP_007079421.1| hypothetical protein Ple7327_0407 [Pleurocapsa sp. PCC 7327]
gi|427978264|gb|AFY75864.1| hypothetical protein Ple7327_0407 [Pleurocapsa sp. PCC 7327]
Length = 492
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 140/240 (58%), Positives = 171/240 (71%), Gaps = 9/240 (3%)
Query: 2 LRLRN--VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDE 53
+R RN + L + A+Y +I D L RPGVGKTT +REIARVL+D+
Sbjct: 92 IRNRNGGIIGLTCRVGRAVYGTIDMIRDLVETGKSILMLGRPGVGKTTALREIARVLADD 151
Query: 54 FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 113
KRV+IVDTSNEI GDGDIPH AIG ARRMQV P LQ+KVMIEAVENHMP+ I++DEI
Sbjct: 152 LNKRVIIVDTSNEIAGDGDIPHPAIGRARRMQVASPELQYKVMIEAVENHMPQAIVIDEI 211
Query: 114 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ 173
GTE EA+A RSIAERGV L+GTAHG +EN+IKNPIL DL+GG+ +VTLGDEEAR R Q
Sbjct: 212 GTELEAYAARSIAERGVQLVGTAHGNSIENLIKNPILCDLVGGIQSVTLGDEEARRRGSQ 271
Query: 174 KSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
K++ ERKAPPTF +EM ER WV H++ +VD LLRG P +++R + V + R
Sbjct: 272 KTVRERKAPPTFDIAVEMLERQRWVVHESVADTVDSLLRGHQPHLQVRTMNGNGRVAITR 331
>gi|282900213|ref|ZP_06308167.1| Single-stranded nucleic acid binding R3H [Cylindrospermopsis
raciborskii CS-505]
gi|281194888|gb|EFA69831.1| Single-stranded nucleic acid binding R3H [Cylindrospermopsis
raciborskii CS-505]
Length = 575
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 142/243 (58%), Positives = 173/243 (71%), Gaps = 9/243 (3%)
Query: 2 LRLRN--VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDE 53
+R RN + L + A++ +I D L RPGVGKTT +REIARVL+D+
Sbjct: 90 IRNRNGKIIGLTCRVGRAIFGTIGMIRDLVETGKSILMLGRPGVGKTTALREIARVLADD 149
Query: 54 FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 113
KRV+I+DTSNEI GDGDI H AIG ARRMQV P LQH+VMIEAVENHMPEVII+DEI
Sbjct: 150 LHKRVIIIDTSNEIAGDGDIAHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIIIDEI 209
Query: 114 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ 173
GTE EA A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ VTLGD+EAR RR Q
Sbjct: 210 GTELEALASRTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRRSQ 269
Query: 174 KSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
K++LERKAPPTF +EM ER WV H++ +VD LLRG+ P + R D++ V + R
Sbjct: 270 KTVLERKAPPTFEIAVEMLERERWVVHESVADTVDALLRGRQPNPQTRTVDEQGKVSIAR 329
Query: 233 WKT 235
T
Sbjct: 330 PLT 332
>gi|284929559|ref|YP_003422081.1| hypothetical protein UCYN_10250 [cyanobacterium UCYN-A]
gi|284810003|gb|ADB95700.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
Length = 590
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 139/242 (57%), Positives = 171/242 (70%), Gaps = 7/242 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQK 56
R ++ L + A++ II D L RPGVGKTT +REIARVL+D+F K
Sbjct: 106 RKGSIIGLTCRVGRAVFGTISIIKDLIETGKSILLLGRPGVGKTTALREIARVLADDFHK 165
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GD D+PHS+IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 166 RVVIIDTSNEIAGDSDVPHSSIGRARRMQVSAPELQHRVMIEAVENHMPEVIVIDEIGTE 225
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN++KNP LSDL+GG+ +VTLGDEEA+ R CQK++
Sbjct: 226 LEALAARTIAERGVQLVGTAHGNEIENLMKNPTLSDLVGGIQSVTLGDEEAKRRGCQKTV 285
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 235
LERKAPPTF IE+ ER W H+ ++D LLR + P EIR V +D K+
Sbjct: 286 LERKAPPTFEIAIEILERQKWNIHQDVACAIDSLLRNRKPNTEIRTVSQNGEVSIDHQKS 345
Query: 236 YD 237
D
Sbjct: 346 ND 347
>gi|425443006|ref|ZP_18823238.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389715784|emb|CCH99888.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 603
Score = 275 bits (704), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 165/228 (72%), Gaps = 7/228 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI+DT
Sbjct: 132 LTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDT 191
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 192 SNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAAR 251
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPP
Sbjct: 252 TIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPP 311
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
TF IEM ER WV H+ ++D LLRG+ + +IR D+ V V
Sbjct: 312 TFDIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 359
>gi|425447044|ref|ZP_18827039.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389732499|emb|CCI03582.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 603
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 165/228 (72%), Gaps = 7/228 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI+DT
Sbjct: 132 LTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDT 191
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 192 SNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAAR 251
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPP
Sbjct: 252 TIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPP 311
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
TF IEM ER WV H+ ++D LLRG+ + +IR D+ V V
Sbjct: 312 TFDIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 359
>gi|334116745|ref|ZP_08490837.1| single-stranded nucleic acid binding R3H domain-containing protein
[Microcoleus vaginatus FGP-2]
gi|333461565|gb|EGK90170.1| single-stranded nucleic acid binding R3H domain-containing protein
[Microcoleus vaginatus FGP-2]
Length = 588
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/240 (58%), Positives = 173/240 (72%), Gaps = 11/240 (4%)
Query: 4 LRN----VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDE 53
LRN + L ++ A++ II D L RPGVGKTT +REIARVL+D+
Sbjct: 91 LRNRSGEIIGLTLRVGRAVFGTIGIIRDLVETGQSILMLGRPGVGKTTALREIARVLADD 150
Query: 54 FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 113
+KRVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMP+VI++DEI
Sbjct: 151 LEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSRPELQHQVMIEAVENHMPQVIVIDEI 210
Query: 114 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ 173
GTE EA A R+IAERGV L+GTAHG +EN++KNP L+DLIGG+ VTLGD+EAR R Q
Sbjct: 211 GTELEALAARTIAERGVQLVGTAHGNRIENLMKNPTLADLIGGIQAVTLGDDEARRRGSQ 270
Query: 174 KSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
K++LERKAPPTF IEM ER WV H + ++D LLRG+ P +IR + V+++R
Sbjct: 271 KTVLERKAPPTFEIAIEMLERERWVIHERVADAIDTLLRGREPHQQIRSVSESGEVIIER 330
>gi|425459771|ref|ZP_18839257.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389827687|emb|CCI20874.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 603
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 165/228 (72%), Gaps = 7/228 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI+DT
Sbjct: 132 LTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDT 191
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 192 SNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAAR 251
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPP
Sbjct: 252 TIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPP 311
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
TF IEM ER WV H+ ++D LLRG+ + +IR D+ V V
Sbjct: 312 TFEIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 359
>gi|422305000|ref|ZP_16392337.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389789775|emb|CCI14286.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 603
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 165/228 (72%), Gaps = 7/228 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI+DT
Sbjct: 132 LTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDT 191
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 192 SNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAAR 251
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPP
Sbjct: 252 TIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPP 311
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
TF IEM ER WV H+ ++D LLRG+ + +IR D+ V V
Sbjct: 312 TFDIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 359
>gi|425455395|ref|ZP_18835115.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389803727|emb|CCI17377.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 603
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 165/228 (72%), Gaps = 7/228 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI+DT
Sbjct: 132 LTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDT 191
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 192 SNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAAR 251
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPP
Sbjct: 252 TIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPP 311
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
TF IEM ER WV H+ ++D LLRG+ + +IR D+ V V
Sbjct: 312 TFDIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 359
>gi|390442301|ref|ZP_10230310.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389834387|emb|CCI34436.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 581
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/231 (60%), Positives = 166/231 (71%), Gaps = 7/231 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
+ L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI
Sbjct: 107 IIGLTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVI 166
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 167 IDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEAL 226
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERK
Sbjct: 227 AARTIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERK 286
Query: 181 APPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
APPTF IEM ER WV H+ ++D LLRG+ + +IR D+ V V
Sbjct: 287 APPTFDIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 337
>gi|116075770|ref|ZP_01473029.1| hypothetical protein RS9916_39931 [Synechococcus sp. RS9916]
gi|116067085|gb|EAU72840.1| hypothetical protein RS9916_39931 [Synechococcus sp. RS9916]
Length = 560
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 134/223 (60%), Positives = 162/223 (72%), Gaps = 7/223 (3%)
Query: 6 NVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVV 59
+V L + A++ I+ D L RPGVGKTT +REIARVL+DE KRVV
Sbjct: 102 DVVGLTCRVGRAVFGTVAIVRDLLDSGESLLLMGRPGVGKTTALREIARVLADELGKRVV 161
Query: 60 IVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 119
++DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 162 VIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEA 221
Query: 120 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILER 179
A R+IAERGVML+ TAHG L N+IKNP L DL+GG+++VTLGDEEAR RR QK++LER
Sbjct: 222 QAARTIAERGVMLVATAHGNALANLIKNPTLCDLVGGIESVTLGDEEARRRRSQKTVLER 281
Query: 180 KAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 221
A PTF +EM +RH W H +VD+LLRG P ++R+
Sbjct: 282 AAEPTFPLAVEMHQRHRWAVHPDVGATVDLLLRGHAPRAQLRE 324
>gi|425449052|ref|ZP_18828896.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389765138|emb|CCI08948.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 603
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 139/228 (60%), Positives = 165/228 (72%), Gaps = 7/228 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI+DT
Sbjct: 132 LTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDT 191
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 192 SNEIAGDGDIPHPAIGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAAR 251
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPP
Sbjct: 252 TIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPP 311
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
TF IEM ER WV H+ ++D LLRG+ + +IR D+ + V
Sbjct: 312 TFEIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKIQV 359
>gi|11465747|ref|NP_053891.1| hypothetical protein PopuCp096 [Porphyra purpurea]
gi|1723347|sp|P51281.1|YCF45_PORPU RecName: Full=Uncharacterized protein ycf45; AltName: Full=ORF565
gi|1276747|gb|AAC08167.1| trnS (chloroplast) [Porphyra purpurea]
Length = 565
Score = 275 bits (703), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 132/205 (64%), Positives = 161/205 (78%), Gaps = 1/205 (0%)
Query: 27 DFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 86
D L +PGVGKTT +REIARVLSDE +KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 124 DSILLLGKPGVGKTTAVREIARVLSDEMEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQV 183
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+P LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +LE++IK
Sbjct: 184 AQPDLQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNYLESLIK 243
Query: 147 NPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKS 205
NP L+DLIGG+ VTLGD+EA+ R QKSILERKA P F IE+ +R W+ H K E++
Sbjct: 244 NPTLADLIGGIQYVTLGDDEAKRRGTQKSILERKAAPAFQIAIEIHDRKAWIVHEKVEET 303
Query: 206 VDMLLRGKTPLVEIRKRDDRFNVVV 230
+D +L+G P V+ R+ D +++
Sbjct: 304 IDQILQGHQPFVQKRQIQDNGRILI 328
>gi|440754058|ref|ZP_20933260.1| R3H domain protein [Microcystis aeruginosa TAIHU98]
gi|440174264|gb|ELP53633.1| R3H domain protein [Microcystis aeruginosa TAIHU98]
Length = 572
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/231 (60%), Positives = 166/231 (71%), Gaps = 7/231 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
+ L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI
Sbjct: 98 IIGLTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVI 157
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 158 IDTSNEIAGDGDIPHPAIGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEAL 217
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERK
Sbjct: 218 AARTIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERK 277
Query: 181 APPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
APPTF IEM ER WV H+ ++D LLRG+ + +IR D+ V V
Sbjct: 278 APPTFDIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 328
>gi|425472177|ref|ZP_18851028.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389881819|emb|CCI37683.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 581
Score = 275 bits (702), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 140/228 (61%), Positives = 165/228 (72%), Gaps = 7/228 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI+DT
Sbjct: 110 LTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDT 169
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 170 SNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEALAAR 229
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPP
Sbjct: 230 TIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPP 289
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
TF IEM ER WV H+ ++D LLRG+ + +IR D+ V V
Sbjct: 290 TFDIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKVQV 337
>gi|220906040|ref|YP_002481351.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Cyanothece sp. PCC 7425]
gi|219862651|gb|ACL42990.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 7425]
Length = 584
Score = 275 bits (702), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/198 (67%), Positives = 158/198 (79%), Gaps = 1/198 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTT +RE+ARVL+DE KRVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH
Sbjct: 140 RPGVGKTTALREMARVLADELLKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPELQH 199
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAHG +EN+IKNP LSDL
Sbjct: 200 QVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAHGNRIENLIKNPTLSDL 259
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRG 212
+GG+ +VTLGDEEAR R QKS+LERKAPPTF +E+ ER WV H + ++VD LLRG
Sbjct: 260 VGGIQSVTLGDEEARRRGSQKSVLERKAPPTFEIAVELLERERWVVHEQVAETVDHLLRG 319
Query: 213 KTPLVEIRKRDDRFNVVV 230
+ P +IR + V++
Sbjct: 320 RIPTPQIRTLSETGKVII 337
>gi|428302124|ref|YP_007140430.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 6303]
gi|428238668|gb|AFZ04458.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 6303]
Length = 588
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/240 (57%), Positives = 168/240 (70%), Gaps = 7/240 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ +I D L RPGVGKTT +REIARVL+DE K
Sbjct: 94 RTGKIIGLTCRVGRAIFGTIGMIRDLVETGKSILMLGRPGVGKTTALREIARVLADELNK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGD+PH AIG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDVPHPAIGKARRMQVSRPEEQHQVMIEAVENHMPEVIVIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ VTLGD+EAR R QK++
Sbjct: 214 LEALAARTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQAVTLGDDEARRRGSQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 235
LERKA PTF +EM ER WV H++ +VDMLLRG+ P + R D+ V + R T
Sbjct: 274 LERKALPTFEIAVEMHERQRWVVHESVADTVDMLLRGRQPSPQTRTVDENGKVAIARHLT 333
>gi|428205270|ref|YP_007089623.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428007191|gb|AFY85754.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 587
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/239 (57%), Positives = 169/239 (70%), Gaps = 7/239 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R ++ L + A++ +I D L RPGVGKTT +REIARVL+D+ K
Sbjct: 94 RAGDIIGLTCRVGRAVFGTIGMIHDLVETGQSILLLGRPGVGKTTALREIARVLADDLNK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGD+PH AIG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDVPHPAIGRARRMQVSRPEFQHQVMIEAVENHMPEVIVIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ +VTLGD+EAR RR QK++
Sbjct: 214 LEALAARTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQSVTLGDDEARRRRTQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 234
LERKAPPTF +EM ER W H++ +VD LLRG+ P ++R D V + R
Sbjct: 274 LERKAPPTFEIAVEMLERQRWTIHESVADTVDALLRGRIPNPQLRTVDADGKVTIVRQS 332
>gi|425438133|ref|ZP_18818542.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389676734|emb|CCH94266.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 603
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/228 (60%), Positives = 165/228 (72%), Gaps = 7/228 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI+DT
Sbjct: 132 LTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDT 191
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 192 SNEIAGDGDIPHPAIGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAAR 251
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPP
Sbjct: 252 TIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPP 311
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
TF IEM ER WV H+ ++D LLRG+ + +IR D+ + V
Sbjct: 312 TFDIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKIQV 359
>gi|159026253|emb|CAO86402.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 603
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/228 (60%), Positives = 165/228 (72%), Gaps = 7/228 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI+DT
Sbjct: 132 LTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDT 191
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 192 SNEIAGDGDIPHPAIGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAAR 251
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERKAPP
Sbjct: 252 TIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPP 311
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
TF IEM ER WV H+ ++D LLRG+ + +IR D+ + V
Sbjct: 312 TFDIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKIQV 359
>gi|434396885|ref|YP_007130889.1| single-stranded nucleic acid binding R3H domain-containing protein
[Stanieria cyanosphaera PCC 7437]
gi|428267982|gb|AFZ33923.1| single-stranded nucleic acid binding R3H domain-containing protein
[Stanieria cyanosphaera PCC 7437]
Length = 584
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/198 (67%), Positives = 156/198 (78%), Gaps = 1/198 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH
Sbjct: 141 RPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSRPELQH 200
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEAVENHMPEVI++DEIGTE E+ A R+IAERGV L+GTAHG +EN+IKNP LSDL
Sbjct: 201 QVMIEAVENHMPEVIVIDEIGTELESLAARTIAERGVQLVGTAHGNTIENLIKNPTLSDL 260
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 212
IGG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H+ ++VD LLRG
Sbjct: 261 IGGIQAVTLGDDEARRRGSQKTVLERKAPPTFAVAVEMLERQRWVVHEDVAQTVDNLLRG 320
Query: 213 KTPLVEIRKRDDRFNVVV 230
P +IR DD + +
Sbjct: 321 IEPTTQIRTVDDSGEISI 338
>gi|148238773|ref|YP_001224160.1| ATPase [Synechococcus sp. WH 7803]
gi|147847312|emb|CAK22863.1| AAA ATPase superfamily protein with a possible REH domain
[Synechococcus sp. WH 7803]
Length = 545
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/217 (61%), Positives = 160/217 (73%), Gaps = 7/217 (3%)
Query: 6 NVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVV 59
+V L + A++ ++ D L RPGVGKTT +REIARVL+D+ KRVV
Sbjct: 100 DVVGLTCRVGRAVFGTVAMVRDLLDSEQSLLLMGRPGVGKTTALREIARVLADDLGKRVV 159
Query: 60 IVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 119
++DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 160 VIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEA 219
Query: 120 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILER 179
A R+IAERGVML+ TAHG L N+IKNP L DL+GG+++VTLGDEEAR RR QK++LER
Sbjct: 220 QAARTIAERGVMLVATAHGNALANLIKNPTLCDLVGGIESVTLGDEEARRRRSQKTVLER 279
Query: 180 KAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTP 215
A PTF IEM RH W H ++VD+LLRG+TP
Sbjct: 280 AAEPTFPIAIEMHSRHRWAVHDDVARTVDLLLRGQTP 316
>gi|17229801|ref|NP_486349.1| hypothetical protein alr2309 [Nostoc sp. PCC 7120]
gi|17131401|dbj|BAB74008.1| alr2309 [Nostoc sp. PCC 7120]
Length = 579
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/206 (64%), Positives = 158/206 (76%), Gaps = 1/206 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H AIG ARRMQV
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAH 185
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVD 207
LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVD 305
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDRW 233
LLRG+ P + R D++ V + R
Sbjct: 306 TLLRGRQPSPQTRTVDEQGKVAITRQ 331
>gi|86610056|ref|YP_478818.1| R3H domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558598|gb|ABD03555.1| R3H domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 639
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 157/205 (76%), Gaps = 1/205 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+PH IG ARRMQV
Sbjct: 156 MLLLGRPGVGKTTALREIARVLADELGKRVVIIDTSNEIAGDGDVPHPGIGRARRMQVAS 215
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P LQHKVMIEAVENHMPEV+++DEIGTE EA A R+IAERGV L+ TAHG ++N+IKNP
Sbjct: 216 PELQHKVMIEAVENHMPEVVVIDEIGTELEALASRTIAERGVQLVATAHGNRIDNLIKNP 275
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVD 207
LSDL+GG+ +VTLGDEEAR R QKS+LERKAPPTF IEM ER WV H+ +VD
Sbjct: 276 TLSDLVGGIQSVTLGDEEARRRGSQKSVLERKAPPTFEIAIEMLERSRWVIHEDVAATVD 335
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDR 232
LLR + PL + R D+ VV+ R
Sbjct: 336 RLLRNREPLTQTRSLDEHGQVVIVR 360
>gi|443669237|ref|ZP_21134472.1| R3H domain protein [Microcystis aeruginosa DIANCHI905]
gi|443330479|gb|ELS45192.1| R3H domain protein [Microcystis aeruginosa DIANCHI905]
Length = 572
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/231 (60%), Positives = 166/231 (71%), Gaps = 7/231 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
+ L + A++ +I D L RPGVGKTT +REIARVL+D+ KRVVI
Sbjct: 98 IIGLTCRIGRAVFGTITLINDLVETGKSLLLLGRPGVGKTTALREIARVLADDLNKRVVI 157
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 158 IDTSNEIAGDGDIPHPAIGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEAL 217
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++LERK
Sbjct: 218 AARTIAERGVQLVGTAHGNQLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTVLERK 277
Query: 181 APPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
APPTF IEM ER WV H+ ++D LLRG+ + +IR D+ + V
Sbjct: 278 APPTFDIAIEMLERQRWVIHEDVSTTIDQLLRGREAIAQIRWVDEEGKIQV 328
>gi|254423701|ref|ZP_05037419.1| R3H domain protein [Synechococcus sp. PCC 7335]
gi|196191190|gb|EDX86154.1| R3H domain protein [Synechococcus sp. PCC 7335]
Length = 665
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/235 (59%), Positives = 168/235 (71%), Gaps = 7/235 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R +V L + A++ +I D L RPGVGKTT +REIARVL+D+ K
Sbjct: 132 RKGDVIGLTCRVGRAVFGTITMIRDLVETGNSILMLGRPGVGKTTALREIARVLADDLMK 191
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 192 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVSHPEKQHQVMIEAVENHMPEVIVIDEIGTE 251
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ +VTLGD+EAR R QKS+
Sbjct: 252 LEALAARTIAERGVQLVGTAHGNRLENLIKNPTLSDLVGGIQSVTLGDDEARRRGSQKSV 311
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
LERKAPPTF +EM ER WV H+ +VD +LRG+ P ++R + VV+
Sbjct: 312 LERKAPPTFDIAVEMLERQRWVVHEDVSSTVDFILRGQVPGQQVRSINAEDQVVI 366
>gi|67922837|ref|ZP_00516336.1| Single-stranded nucleic acid binding R3H [Crocosphaera watsonii WH
8501]
gi|67855330|gb|EAM50590.1| Single-stranded nucleic acid binding R3H [Crocosphaera watsonii WH
8501]
Length = 604
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 137/232 (59%), Positives = 168/232 (72%), Gaps = 7/232 (3%)
Query: 6 NVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVV 59
++ L + A++ +I D L RPGVGKTT +REIARVL+D+F KRVV
Sbjct: 125 DIIGLTCRVGRAVFGTISMIRDLVETGQSLLLLGRPGVGKTTALREIARVLADDFDKRVV 184
Query: 60 IVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 119
I+DTSNEI GDGDIPH AIG ARRMQV P LQHK+MIEAVENHMPEVI++DEIGTE EA
Sbjct: 185 IIDTSNEIAGDGDIPHPAIGRARRMQVATPELQHKIMIEAVENHMPEVIVIDEIGTELEA 244
Query: 120 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILER 179
A R+IAERGV L+GTAHG +EN++KNP LSDLIGG+ VTLGD+EAR R QK++LER
Sbjct: 245 LAARTIAERGVQLVGTAHGNQIENLLKNPTLSDLIGGIQAVTLGDDEARRRGSQKTVLER 304
Query: 180 KAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
KAPPTF IEM ER WV H+ ++D+LLR P ++R D++ V +
Sbjct: 305 KAPPTFEIAIEMLERQKWVIHEDVANTIDILLRSGHPKPQVRTVDEKGEVQI 356
>gi|428224232|ref|YP_007108329.1| single-stranded nucleic acid binding R3H domain-containing protein
[Geitlerinema sp. PCC 7407]
gi|427984133|gb|AFY65277.1| single-stranded nucleic acid binding R3H domain-containing protein
[Geitlerinema sp. PCC 7407]
Length = 605
Score = 274 bits (700), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 139/237 (58%), Positives = 169/237 (71%), Gaps = 7/237 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R +V L + A++ +I D L RPGVGKTT +REIARVL+D+ +K
Sbjct: 124 RSGDVIGLTCRVGRAIFGTIGMIRDLVETGQSILLLGRPGVGKTTALREIARVLADDLEK 183
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 184 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTE 243
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG + N+IKNP LSDL+GG+ +VTLGD+EAR R QK++
Sbjct: 244 LEALAARTIAERGVQLVGTAHGNQIANLIKNPTLSDLVGGIQSVTLGDDEARRRGSQKTV 303
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
LERKAPPTF +EM ER WV H+ +VD LLRG+ P +IR + V + R
Sbjct: 304 LERKAPPTFEIAVEMLERERWVVHENVADTVDQLLRGRQPNPQIRTVSEGGKVTITR 360
>gi|416393486|ref|ZP_11686016.1| hypothetical protein CWATWH0003_2819 [Crocosphaera watsonii WH
0003]
gi|357263482|gb|EHJ12485.1| hypothetical protein CWATWH0003_2819 [Crocosphaera watsonii WH
0003]
Length = 576
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 137/232 (59%), Positives = 168/232 (72%), Gaps = 7/232 (3%)
Query: 6 NVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVV 59
++ L + A++ +I D L RPGVGKTT +REIARVL+D+F KRVV
Sbjct: 97 DIIGLTCRVGRAVFGTISMIRDLVETGQSLLLLGRPGVGKTTALREIARVLADDFDKRVV 156
Query: 60 IVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 119
I+DTSNEI GDGDIPH AIG ARRMQV P LQHK+MIEAVENHMPEVI++DEIGTE EA
Sbjct: 157 IIDTSNEIAGDGDIPHPAIGRARRMQVATPELQHKIMIEAVENHMPEVIVIDEIGTELEA 216
Query: 120 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILER 179
A R+IAERGV L+GTAHG +EN++KNP LSDLIGG+ VTLGD+EAR R QK++LER
Sbjct: 217 LAARTIAERGVQLVGTAHGNQIENLLKNPTLSDLIGGIQAVTLGDDEARRRGSQKTVLER 276
Query: 180 KAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
KAPPTF IEM ER WV H+ ++D+LLR P ++R D++ V +
Sbjct: 277 KAPPTFEIAIEMLERQKWVIHEDVANTIDILLRSGHPNPQVRTVDEKGEVQI 328
>gi|88807880|ref|ZP_01123391.1| hypothetical protein WH7805_06956 [Synechococcus sp. WH 7805]
gi|88787919|gb|EAR19075.1| hypothetical protein WH7805_06956 [Synechococcus sp. WH 7805]
Length = 546
Score = 273 bits (699), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 129/183 (70%), Positives = 150/183 (81%), Gaps = 1/183 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTT +REIARVL+DE QKRVV++DTSNEI GDGDIPH AIG ARRMQV P LQH
Sbjct: 134 RPGVGKTTALREIARVLADELQKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQH 193
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAHG L N+IKNP L DL
Sbjct: 194 QVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNALTNLIKNPTLCDL 253
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRG 212
+GG+++VTLGDEEAR RR QK++LER A PTF IEM RH W H ++VD+LLRG
Sbjct: 254 VGGIESVTLGDEEARRRRSQKTVLERAAEPTFPIAIEMHSRHRWAVHDDVARTVDLLLRG 313
Query: 213 KTP 215
++P
Sbjct: 314 QSP 316
>gi|428314326|ref|YP_007125303.1| hypothetical protein Mic7113_6310 [Microcoleus sp. PCC 7113]
gi|428255938|gb|AFZ21897.1| hypothetical protein Mic7113_6310 [Microcoleus sp. PCC 7113]
Length = 611
Score = 273 bits (699), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 134/205 (65%), Positives = 158/205 (77%), Gaps = 1/205 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 164 ILMLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAR 223
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP
Sbjct: 224 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRIENLIKNP 283
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVD 207
LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF IEM ER WV H++ +VD
Sbjct: 284 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVVHESVSDTVD 343
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDR 232
LLRG+ P ++R + V + R
Sbjct: 344 DLLRGRQPNPQVRTAHENGKVTITR 368
>gi|428776905|ref|YP_007168692.1| single-stranded nucleic acid binding R3H domain-containing protein
[Halothece sp. PCC 7418]
gi|428691184|gb|AFZ44478.1| single-stranded nucleic acid binding R3H domain-containing protein
[Halothece sp. PCC 7418]
Length = 599
Score = 273 bits (698), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 139/235 (59%), Positives = 167/235 (71%), Gaps = 7/235 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A+Y +I D L RPGVGKTT +REIARVL+D+ K
Sbjct: 126 RTGEIVGLTCRIGRAVYGTIGMIRDLVETGRSILMLGRPGVGKTTALREIARVLADDLNK 185
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH +IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 186 RVVIIDTSNEIAGDGDIPHPSIGRARRMQVASPELQHQVMIEAVENHMPEVIVIDEIGTE 245
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG L+N+IKNP LSDLIGG+ VTLGDEEAR R QK++
Sbjct: 246 LEALATRTIAERGVQLVGTAHGNQLDNLIKNPTLSDLIGGIQAVTLGDEEARRRGSQKTV 305
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
LERKA PTF +EM ER WV H+ ++D LLRG PL E+R +++ V +
Sbjct: 306 LERKALPTFDIAVEMLERRRWVVHQDVSVTIDQLLRGHDPLTEVRSANEQGEVEI 360
>gi|16329574|ref|NP_440302.1| hypothetical protein slr0692 [Synechocystis sp. PCC 6803]
gi|383321315|ref|YP_005382168.1| hypothetical protein SYNGTI_0406 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324485|ref|YP_005385338.1| hypothetical protein SYNPCCP_0406 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490369|ref|YP_005408045.1| hypothetical protein SYNPCCN_0406 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435635|ref|YP_005650359.1| hypothetical protein SYNGTS_0406 [Synechocystis sp. PCC 6803]
gi|451813733|ref|YP_007450185.1| YCF45 protein [Synechocystis sp. PCC 6803]
gi|1652057|dbj|BAA16982.1| ycf45 [Synechocystis sp. PCC 6803]
gi|339272667|dbj|BAK49154.1| hypothetical protein SYNGTS_0406 [Synechocystis sp. PCC 6803]
gi|359270634|dbj|BAL28153.1| hypothetical protein SYNGTI_0406 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273805|dbj|BAL31323.1| hypothetical protein SYNPCCN_0406 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276975|dbj|BAL34492.1| hypothetical protein SYNPCCP_0406 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407957455|dbj|BAM50695.1| hypothetical protein BEST7613_1764 [Synechocystis sp. PCC 6803]
gi|451779702|gb|AGF50671.1| YCF45 protein [Synechocystis sp. PCC 6803]
Length = 589
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 136/236 (57%), Positives = 168/236 (71%), Gaps = 7/236 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ +I D L RPGVGKTT +REIARVL+D+ K
Sbjct: 103 RTNEIIGLTCRVGRAVFGTINLIQDLVETGESLLLLGRPGVGKTTALREIARVLADDLHK 162
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 163 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTE 222
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG LEN+IKNP LSDL+GG+ VTLGDEEAR R QK++
Sbjct: 223 LEALAARTIAERGVQLVGTAHGNRLENLIKNPTLSDLVGGIQAVTLGDEEARRRGSQKTV 282
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVD 231
LERKAPPTF +EM ER W H ++D LLRG+ P+ ++R +++ + ++
Sbjct: 283 LERKAPPTFSMAVEMLERQKWTIHSDVALTIDNLLRGRPPVEQLRYMNEQGELQIE 338
>gi|378787319|gb|AFC39950.1| hypothetical protein [Porphyra umbilicalis]
Length = 565
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 135/216 (62%), Positives = 163/216 (75%), Gaps = 4/216 (1%)
Query: 27 DFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 86
D L +PGVGKTT +REIARVL+DE +KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 124 DSILLLGKPGVGKTTAVREIARVLADEMEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQV 183
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
P LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG LE++IK
Sbjct: 184 ARPDLQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNHLESLIK 243
Query: 147 NPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKS 205
NP L+DLIGG+ VTLGD+EA+ R QKSILERKA P F IE+ +R W+ H K E++
Sbjct: 244 NPTLADLIGGIQYVTLGDDEAKRRGTQKSILERKAAPAFQIAIEIHDRKVWIVHDKVEQT 303
Query: 206 VDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 241
+D +L+G P V+ R+ D +++ K Y H I
Sbjct: 304 IDQILQGHQPFVQKRQIQDNGRILI---KCYPSHSI 336
>gi|390559754|ref|ZP_10244042.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
gi|390173675|emb|CCF83341.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
Length = 563
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 142/241 (58%), Positives = 170/241 (70%), Gaps = 7/241 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R ++ L + A+Y II D L RPGVGKTT++RE ARVL+D+ +K
Sbjct: 114 RSGDIVGLTCRIGRAVYGTIGIIRDLVESGESILLLGRPGVGKTTMLRETARVLADDLRK 173
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVIVDTSNEI GDGDIPH +IG ARRMQVP PSLQH VMIEA+ENHMPEVI++DEIGTE
Sbjct: 174 RVVIVDTSNEIAGDGDIPHPSIGRARRMQVPSPSLQHAVMIEAIENHMPEVIVIDEIGTE 233
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG LEN++ NP LSDLIGG+ +VTL DEEAR R QKSI
Sbjct: 234 LEAAAARTIAERGVQLVGTAHGNTLENLMMNPTLSDLIGGIQSVTLSDEEARRRGTQKSI 293
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 235
LERKAPPTF ++E++ R H+ SVD +LRG+ VEIR+R V V +
Sbjct: 294 LERKAPPTFTVMVEIQARDRVAVHRDVAASVDSILRGRPLQVEIRQRGADGEVTVTLEQP 353
Query: 236 Y 236
Y
Sbjct: 354 Y 354
>gi|414079590|ref|YP_007001014.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena sp. 90]
gi|413972869|gb|AFW96957.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena sp. 90]
Length = 583
Score = 273 bits (698), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 134/206 (65%), Positives = 157/206 (76%), Gaps = 1/206 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGD+ H AIG ARRMQV +
Sbjct: 126 ILMLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVSK 185
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP
Sbjct: 186 PELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNP 245
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVD 207
LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H+ +VD
Sbjct: 246 TLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHECVADTVD 305
Query: 208 MLLRGKTPLVEIRKRDDRFNVVVDRW 233
LLRG+ P + R DD V V R
Sbjct: 306 TLLRGRQPTPQTRTVDDNGKVGVVRQ 331
>gi|221632236|ref|YP_002521457.1| ATPase-like protein [Thermomicrobium roseum DSM 5159]
gi|221156979|gb|ACM06106.1| ATPase-like protein [Thermomicrobium roseum DSM 5159]
Length = 562
Score = 272 bits (696), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 140/221 (63%), Positives = 165/221 (74%), Gaps = 7/221 (3%)
Query: 10 LIVKFFYALYSINKIIFDFFLS------YFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A+Y II D S RPGVGKTT++RE ARVL+D+ +KRV++VDT
Sbjct: 107 LTCRIGRAVYGTVAIIRDLIESGESILLLGRPGVGKTTMLRETARVLADDLRKRVIVVDT 166
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQVP PSLQH VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 167 SNEIAGDGDIPHPAIGRARRMQVPTPSLQHAVMIEAVENHMPEVIVIDEIGTELEAAAAR 226
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV LIGTAHG LENI+ NP LSDLIGG+ +VTL DEEAR R QKSILERKAPP
Sbjct: 227 TIAERGVQLIGTAHGNTLENIMMNPTLSDLIGGIQSVTLSDEEARRRGTQKSILERKAPP 286
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRD 223
TF L+E++ R+ H+ +VD +LRG+ VEIR+R+
Sbjct: 287 TFGVLVEIQSRNRVAVHRDVAAAVDAILRGQPLRVEIRERN 327
>gi|427711502|ref|YP_007060126.1| hypothetical protein Syn6312_0350 [Synechococcus sp. PCC 6312]
gi|427375631|gb|AFY59583.1| hypothetical protein Syn6312_0350 [Synechococcus sp. PCC 6312]
Length = 571
Score = 272 bits (696), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 138/235 (58%), Positives = 168/235 (71%), Gaps = 7/235 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ +I D L RPGVGKTT +RE+ARVL+D+ K
Sbjct: 102 RQGTIIGLTCRVGRAVFGTIGLIRDLVESEQSILLLGRPGVGKTTALREMARVLADDLHK 161
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH A+G ARRMQV P LQH+VMIEAVENHMP+VI++DEIGTE
Sbjct: 162 RVVIIDTSNEIAGDGDIPHPALGRARRMQVARPELQHQVMIEAVENHMPQVIVIDEIGTE 221
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV LIGTAHG LEN+IKNP L+DL+GG+ +VTLGD+EAR R QKS+
Sbjct: 222 LEALAARTIAERGVQLIGTAHGNRLENLIKNPTLADLVGGIQSVTLGDDEARRRGTQKSV 281
Query: 177 LERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
LERKAPPTF +EM ER WV H ++VD LLRG TP + R ++ VV+
Sbjct: 282 LERKAPPTFPIAVEMLERERWVVHDNVAETVDQLLRGHTPNPQTRSVNENGEVVI 336
>gi|443321273|ref|ZP_21050332.1| hypothetical protein GLO73106DRAFT_00025300 [Gloeocapsa sp. PCC
73106]
gi|442789018|gb|ELR98692.1| hypothetical protein GLO73106DRAFT_00025300 [Gloeocapsa sp. PCC
73106]
Length = 571
Score = 272 bits (695), Expect = 9e-71, Method: Compositional matrix adjust.
Identities = 133/209 (63%), Positives = 159/209 (76%), Gaps = 1/209 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH
Sbjct: 140 RPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSRPELQH 199
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKNP LSDL
Sbjct: 200 QVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRLENLIKNPTLSDL 259
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 212
+GG+ VTLGD+EAR R QK++LERKAPPTF IEM E+ WV H+ +++D LLRG
Sbjct: 260 VGGIQAVTLGDDEARRRNSQKTVLERKAPPTFAIAIEMLEKQRWVIHEDVAQTIDALLRG 319
Query: 213 KTPLVEIRKRDDRFNVVVDRWKTYDRHDI 241
+IR + + NV + Y + +
Sbjct: 320 YATPQQIRTVNGQGNVEITEEPGYTTNQV 348
>gi|172037264|ref|YP_001803765.1| hypothetical protein cce_2349 [Cyanothece sp. ATCC 51142]
gi|354553853|ref|ZP_08973159.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. ATCC 51472]
gi|171698718|gb|ACB51699.1| unknown [Cyanothece sp. ATCC 51142]
gi|353554570|gb|EHC23960.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. ATCC 51472]
Length = 604
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/235 (58%), Positives = 167/235 (71%), Gaps = 7/235 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R ++ L + A++ +I D L RPGVGKTT +REIARVL+D+F K
Sbjct: 122 RTGDIIGLTCRVGRAVFGTISMIRDLVETGQSLLLLGRPGVGKTTALREIARVLADDFDK 181
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P LQHKVMIEAVENHMPEVI++DEIGTE
Sbjct: 182 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVATPELQHKVMIEAVENHMPEVIVIDEIGTE 241
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN++KNP LSDL+GG+ VTLGD+EAR R QK++
Sbjct: 242 LEALAARTIAERGVQLVGTAHGNRIENLMKNPTLSDLVGGIQAVTLGDDEARRRGSQKTV 301
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
LERKAPPTF IEM ER WV H+ ++D+LLR P + R D+ V +
Sbjct: 302 LERKAPPTFEIAIEMLERQKWVVHEDVAYTIDILLRNGEPNPQTRTVDENGEVQI 356
>gi|427703065|ref|YP_007046287.1| hypothetical protein Cyagr_1807 [Cyanobium gracile PCC 6307]
gi|427346233|gb|AFY28946.1| hypothetical protein Cyagr_1807 [Cyanobium gracile PCC 6307]
Length = 534
Score = 272 bits (695), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 132/226 (58%), Positives = 165/226 (73%), Gaps = 7/226 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQK 56
R +V L + A++ ++ D L RPGVGKTT +REIARVL+D+ Q+
Sbjct: 82 RTGDVVGLTCRVGRAVFGTVAMVRDLLDTGQSLLLMGRPGVGKTTALREIARVLADDLQR 141
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVV++DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 142 RVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTE 201
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGVML+ TAHG L N+I+NP LSDL+GG+ +VTLGDEEAR RR QK++
Sbjct: 202 LEAQAARTIAERGVMLVATAHGNELANLIRNPTLSDLVGGIQSVTLGDEEARRRRTQKTV 261
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 221
LER A PTF +EM RH W+ H+ +VD+LLRG+ ++R+
Sbjct: 262 LERAAEPTFPLAVEMHSRHRWLVHRDVAGTVDLLLRGQPSHPQVRE 307
>gi|254432798|ref|ZP_05046501.1| ATPase [Cyanobium sp. PCC 7001]
gi|197627251|gb|EDY39810.1| ATPase [Cyanobium sp. PCC 7001]
Length = 579
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 133/226 (58%), Positives = 165/226 (73%), Gaps = 7/226 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQK 56
R+ + L + A++ ++ D L RPGVGKTT +REIARVL+D+ K
Sbjct: 117 RIGTIVGLTCRVGRAVFGTVVMVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADDLGK 176
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVV++DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 177 RVVVIDTSNEIAGDGDIPHPAIGRARRMQVVRPDLQHEVMIEAVENHMPEVIVIDEIGTE 236
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGVML+ TAHG L N+IKNP LSDL+GG+ +VTLGDEEAR RR QK++
Sbjct: 237 REAQAARTIAERGVMLVATAHGNELTNLIKNPTLSDLVGGIQSVTLGDEEARRRRTQKTV 296
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 221
LER A PTF +EM RH W+ H+ ++VD LLRG+T ++R+
Sbjct: 297 LERAAEPTFPLAVEMHSRHRWLIHRDVAQTVDGLLRGQTARPQVRE 342
>gi|427719465|ref|YP_007067459.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 7507]
gi|427351901|gb|AFY34625.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 7507]
Length = 578
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 139/238 (58%), Positives = 166/238 (69%), Gaps = 7/238 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ +I D L RPGVGKTT +REIARVL+DE K
Sbjct: 94 RTGKIIGLTCRVGRAVFGTIGMIRDLVETGKSILMLGRPGVGKTTALREIARVLADELNK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGD+ H AIG ARRMQV P QH+VMIEAVENHMPEVII+DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDVAHPAIGRARRMQVAHPDQQHQVMIEAVENHMPEVIIIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN+IKNP L+DL+GG+ VTLGD+EAR R QK++
Sbjct: 214 LEALAARTIAERGVQLVGTAHGNQIENLIKNPTLADLVGGIQAVTLGDDEARRRGSQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRW 233
LERKAPPTF +EM ER WV H++ +VD LLRG+ P + R DD V V R
Sbjct: 274 LERKAPPTFEIAVEMLERQRWVVHESVADTVDNLLRGRQPNPQTRTVDDEGKVSVARQ 331
>gi|78185517|ref|YP_377952.1| ATPase [Synechococcus sp. CC9902]
gi|78169811|gb|ABB26908.1| ATPase [Synechococcus sp. CC9902]
Length = 539
Score = 271 bits (693), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/222 (60%), Positives = 160/222 (72%), Gaps = 7/222 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A++ ++ D L RPGVGKTT +REIARVL+DE Q+RVV+
Sbjct: 101 VVGLTCRVGRAVFGTVAMVRDLLDSAQSLLLMGRPGVGKTTALREIARVLADEMQRRVVV 160
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
+DTSNEI GDGDIPH AIG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 161 IDTSNEIAGDGDIPHPAIGRARRMQVSSPEQQHQVMIEAVENHMPEVIVIDEIGTELEAM 220
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGVML+ TAHG L N+IKNP LSDL+GG+ +VTLGD+EAR RR QK++LER
Sbjct: 221 AARTIAERGVMLVATAHGNALANLIKNPTLSDLVGGIQSVTLGDDEARRRRTQKTVLERA 280
Query: 181 APPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 221
A PTF +EM RH W H +VD LLRG+ P VE R+
Sbjct: 281 AEPTFPLAVEMHSRHRWSIHADVAATVDQLLRGQQPRVEQRE 322
>gi|116072568|ref|ZP_01469834.1| ATPase [Synechococcus sp. BL107]
gi|116064455|gb|EAU70215.1| ATPase [Synechococcus sp. BL107]
Length = 550
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/222 (60%), Positives = 160/222 (72%), Gaps = 7/222 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A++ ++ D L RPGVGKTT +REIARVL+DE Q+RVV+
Sbjct: 101 VVGLTCRVGRAVFGTVAMVRDLLDSAKSLLLMGRPGVGKTTALREIARVLADEMQRRVVV 160
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
+DTSNEI GDGDIPH AIG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 161 IDTSNEIAGDGDIPHPAIGRARRMQVSSPERQHQVMIEAVENHMPEVIVIDEIGTELEAM 220
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGVML+ TAHG L N+IKNP LSDL+GG+ +VTLGD+EAR RR QK++LER
Sbjct: 221 AARTIAERGVMLVATAHGNALANLIKNPTLSDLVGGIQSVTLGDDEARRRRTQKTVLERA 280
Query: 181 APPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 221
A PTF +EM RH W H +VD LLRG+ P VE R+
Sbjct: 281 AEPTFPLAVEMHSRHRWSIHADVAATVDQLLRGQKPRVEQRE 322
>gi|298491066|ref|YP_003721243.1| single-stranded nucleic acid-binding R3H domain-containing protein
['Nostoc azollae' 0708]
gi|298232984|gb|ADI64120.1| single-stranded nucleic acid binding R3H domain protein ['Nostoc
azollae' 0708]
Length = 579
Score = 271 bits (692), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 131/200 (65%), Positives = 156/200 (78%), Gaps = 1/200 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDI HSAIG ARRMQV +P LQH+
Sbjct: 132 PGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIAHSAIGRARRMQVAKPELQHQ 191
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP LSDL+
Sbjct: 192 VMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTLSDLV 251
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD LLRG+
Sbjct: 252 GGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMMERQRWVVHESVADTVDTLLRGR 311
Query: 214 TPLVEIRKRDDRFNVVVDRW 233
+ R D+ V + R
Sbjct: 312 QANPQTRSMDENGKVAITRQ 331
>gi|427417957|ref|ZP_18908140.1| hypothetical protein Lepto7375DRAFT_3694 [Leptolyngbya sp. PCC
7375]
gi|425760670|gb|EKV01523.1| hypothetical protein Lepto7375DRAFT_3694 [Leptolyngbya sp. PCC
7375]
Length = 594
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/225 (61%), Positives = 162/225 (72%), Gaps = 7/225 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ ++I D L RPGVGKTT +REIARVL+D+ K
Sbjct: 115 RAGTIIGLTCRVGRAVFGTVEMIRDLVEAGQSILLLGRPGVGKTTALREIARVLADDLDK 174
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P QH+VMIEAVENH PEVII+DEIGTE
Sbjct: 175 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPEQQHQVMIEAVENHTPEVIIIDEIGTE 234
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG LEN+IKNP L+DLIGG+ TVTLGD+EAR R QKS+
Sbjct: 235 LEALAARTIAERGVQLVGTAHGNQLENLIKNPTLADLIGGIQTVTLGDDEARRRGSQKSV 294
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIR 220
LERKAPPTF IEM ER WV H+ +VD LLRG+ ++R
Sbjct: 295 LERKAPPTFDMAIEMLERQRWVVHEDVAATVDHLLRGRMSETQVR 339
>gi|359461140|ref|ZP_09249703.1| hypothetical protein ACCM5_20609 [Acaryochloris sp. CCMEE 5410]
Length = 577
Score = 270 bits (690), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 135/228 (59%), Positives = 164/228 (71%), Gaps = 7/228 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A+ +II D L RPGVGKTT +REIARVL+D+ KRVVI+DT
Sbjct: 110 LTCRVGRAVLGTTEIIRDLVESGRSILMLGRPGVGKTTALREIARVLADDLLKRVVIIDT 169
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENH PEVI++DEIGTE EA A R
Sbjct: 170 SNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHTPEVIVIDEIGTELEAAAAR 229
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV LIGTAHG +EN++KNP LSDL+GG+ +VTLGD+EAR R QKS+LERKAPP
Sbjct: 230 TIAERGVQLIGTAHGNRIENLLKNPTLSDLVGGIQSVTLGDDEARRRGSQKSVLERKAPP 289
Query: 184 TFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
TF +EM ER W+ H + ++D LLRG+ P ++R + V +
Sbjct: 290 TFDIAVEMLERSRWIVHEEVANTIDNLLRGRMPNPQVRTVSESGKVTI 337
>gi|158334816|ref|YP_001515988.1| hypothetical protein AM1_1653 [Acaryochloris marina MBIC11017]
gi|158305057|gb|ABW26674.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 577
Score = 270 bits (689), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 135/228 (59%), Positives = 164/228 (71%), Gaps = 7/228 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A+ +II D L RPGVGKTT +REIARVL+D+ KRVVI+DT
Sbjct: 110 LTCRVGRAVLGTTEIIRDLVESGRSILMLGRPGVGKTTALREIARVLADDLLKRVVIIDT 169
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENH PEVI++DEIGTE EA A R
Sbjct: 170 SNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHTPEVIVIDEIGTELEAAAAR 229
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV LIGTAHG +EN++KNP LSDL+GG+ +VTLGD+EAR R QKS+LERKAPP
Sbjct: 230 TIAERGVQLIGTAHGNRIENLLKNPTLSDLVGGIQSVTLGDDEARRRGSQKSVLERKAPP 289
Query: 184 TFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
TF +EM ER W+ H + ++D LLRG+ P ++R + V +
Sbjct: 290 TFDIAVEMLERSRWIVHEEVANTIDNLLRGRMPNPQVRTVSESGKVTI 337
>gi|218246053|ref|YP_002371424.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Cyanothece sp. PCC 8801]
gi|257059102|ref|YP_003136990.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. PCC 8802]
gi|218166531|gb|ACK65268.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 8801]
gi|256589268|gb|ACV00155.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 8802]
Length = 602
Score = 270 bits (689), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 137/237 (57%), Positives = 167/237 (70%), Gaps = 7/237 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ +I D L RPGVGKTT +REIARVL+D+ K
Sbjct: 125 RTGKIIGLTCRMGRAIFGTITMIQDLVETGKSLLLLGRPGVGKTTALREIARVLADDLHK 184
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 185 RVVIIDTSNEIAGDGDIPHPAIGRARRMQVASPELQHQVMIEAVENHMPEVIVIDEIGTE 244
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN++KNP LSDL+GG+ VTLGDEEAR R QK++
Sbjct: 245 LEALAARTIAERGVQLVGTAHGNRIENLLKNPTLSDLVGGIQAVTLGDEEARRRGSQKTV 304
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
LERKAPPTF IEM ER WV H+ +VD+LLR P ++R ++ V + +
Sbjct: 305 LERKAPPTFEIAIEMLERQRWVVHEDVSHTVDILLRNGEPNPQLRTINEHGEVEISQ 361
>gi|434403513|ref|YP_007146398.1| hypothetical protein Cylst_1432 [Cylindrospermum stagnale PCC 7417]
gi|428257768|gb|AFZ23718.1| hypothetical protein Cylst_1432 [Cylindrospermum stagnale PCC 7417]
Length = 578
Score = 269 bits (687), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 136/238 (57%), Positives = 166/238 (69%), Gaps = 7/238 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ +I D L RPGVGKTT +REIARVL+D+ K
Sbjct: 94 RTGKIIGLTCRVGRAVFGTIGMIRDLVETGKSILMLGRPGVGKTTALREIARVLADDLHK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGD+ H AIG ARRMQV P QH+VMIEAVENHMPEVII+DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDVAHPAIGRARRMQVAHPDQQHQVMIEAVENHMPEVIIIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN+IKNP L DL+GG+ VTLGD+EAR R QK++
Sbjct: 214 LEALAARTIAERGVQLVGTAHGNQIENLIKNPTLCDLVGGIQAVTLGDDEARRRGSQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRW 233
LERKAPPTF +EM ER WV H++ +VD LLRG+ P + R D++ V + R
Sbjct: 274 LERKAPPTFEIAVEMLERQRWVVHESVADTVDNLLRGRQPSPQTRTVDEQGKVAITRQ 331
>gi|428780211|ref|YP_007171997.1| hypothetical protein Dacsa_1993 [Dactylococcopsis salina PCC 8305]
gi|428694490|gb|AFZ50640.1| hypothetical protein Dacsa_1993 [Dactylococcopsis salina PCC 8305]
Length = 602
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 136/226 (60%), Positives = 163/226 (72%), Gaps = 7/226 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A+Y +I D L RPGVGKTT +REIARVL+D+ KRVVI+DT
Sbjct: 134 LTCRIGRAVYGTIGMIRDLVETGRSILMLGRPGVGKTTALREIARVLADDLNKRVVIIDT 193
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH +IG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 194 SNEIAGDGDIPHPSIGRARRMQVSRPELQHQVMIEAVENHMPEVIVIDEIGTELEALAAR 253
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG L+N+IKNP LSDLIGG+ VTLGDEEAR R QK++LERKA P
Sbjct: 254 TIAERGVQLVGTAHGNRLDNLIKNPTLSDLIGGIQAVTLGDEEARRRGSQKTVLERKALP 313
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNV 228
TF +EM ER WV H+ +++D LRG P E+R +++ V
Sbjct: 314 TFDIAVEMLERRRWVVHQEVSETIDQFLRGHDPATEVRLANEQGEV 359
>gi|186685424|ref|YP_001868620.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nostoc punctiforme PCC 73102]
gi|186467876|gb|ACC83677.1| single-stranded nucleic acid binding R3H domain protein [Nostoc
punctiforme PCC 73102]
Length = 577
Score = 269 bits (687), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 136/238 (57%), Positives = 166/238 (69%), Gaps = 7/238 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A++ +I D L RPGVGKTT +REIARVL+D+ K
Sbjct: 94 RTGKIIGLTCRVGRAVFGTIGMIRDLVETGKSILMLGRPGVGKTTALREIARVLADDLHK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVI+DTSNEI GDGD+ H AIG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 154 RVVIIDTSNEIAGDGDVAHPAIGRARRMQVAHPEQQHQVMIEAVENHMPEVIVIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+GTAHG +EN+IKNP L+DL+GG+ VTLGD+EAR R QK++
Sbjct: 214 LEALAARTIAERGVQLVGTAHGNQIENLIKNPTLADLVGGIQAVTLGDDEARRRGSQKTV 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRW 233
LERKAPPTF +EM ER WV H++ +VD LLRG+ + R DD+ V V R
Sbjct: 274 LERKAPPTFEIAVEMLERQRWVVHESVADTVDNLLRGRQATPQTRTVDDQGKVAVTRQ 331
>gi|51209952|ref|YP_063616.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
var. liui]
gi|50657706|gb|AAT79691.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
var. liui]
Length = 562
Score = 268 bits (686), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/189 (68%), Positives = 157/189 (83%), Gaps = 1/189 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
+PGVGKTTV+REIARVL+DE +KRVVI+DTSNEI GDGD+PH AIG ARRMQV +P LQH
Sbjct: 131 KPGVGKTTVIREIARVLADEMEKRVVIIDTSNEIAGDGDVPHPAIGRARRMQVSKPELQH 190
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEA+ENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +L+++IKNPILSDL
Sbjct: 191 QVMIEAIENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNYLDSLIKNPILSDL 250
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRG 212
IGG+ VTLGD+EA+ R QKSILERKA P F IE+ +RH W+ H++ ++VD LL+G
Sbjct: 251 IGGIQYVTLGDDEAKRRGSQKSILERKASPAFQVAIEIHDRHSWIVHESVGRAVDQLLQG 310
Query: 213 KTPLVEIRK 221
V+ RK
Sbjct: 311 VNLWVQRRK 319
>gi|317968814|ref|ZP_07970204.1| ATPase [Synechococcus sp. CB0205]
Length = 318
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/217 (59%), Positives = 160/217 (73%), Gaps = 7/217 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R +V L + A++ ++ D L RPGVGKTT +REIARVL+DE K
Sbjct: 102 RSGDVVGLTCRVGRAVFGTVAMVRDLMDSGQSLLLMGRPGVGKTTALREIARVLADELDK 161
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVV++DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPE+I++DEIGTE
Sbjct: 162 RVVVIDTSNEIAGDGDIPHPAIGRARRMQVTRPELQHQVMIEAVENHMPEIIVIDEIGTE 221
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGVML+ TAHG L N++KNP LSDL+GG+++VTLGDEEAR RR QK++
Sbjct: 222 LEAQAARTIAERGVMLVATAHGNELANLVKNPTLSDLVGGIESVTLGDEEARRRRTQKTV 281
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 212
LER A PTF +EM R W+ H+ ++VD+LLRG
Sbjct: 282 LERAAEPTFPMAVEMHSRDRWLVHRDVARTVDLLLRG 318
>gi|357168544|ref|XP_003581698.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein ycf45-like
[Brachypodium distachyon]
Length = 157
Score = 268 bits (685), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/156 (82%), Positives = 140/156 (89%)
Query: 46 IARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMP 105
+ARV++DEFQKR VIVDTSNEIGGDGDIPH+AIG ARRMQVPEPS+QH+VMIE VENHMP
Sbjct: 1 MARVVADEFQKRQVIVDTSNEIGGDGDIPHAAIGGARRMQVPEPSMQHRVMIEVVENHMP 60
Query: 106 EVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDE 165
EV+IVDEI TE EA ACRSI ERGVMLIGTAHGE L NIIKNP+LSDLIGGV TVTLGDE
Sbjct: 61 EVVIVDEIXTETEAQACRSIVERGVMLIGTAHGERLANIIKNPVLSDLIGGVKTVTLGDE 120
Query: 166 EARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK 201
EARAR +SILERKAPP F FL+E+RE HYWVTH+
Sbjct: 121 EARARHTLRSILERKAPPAFPFLVELRELHYWVTHR 156
>gi|81299436|ref|YP_399644.1| single-stranded nucleic acid binding R3H [Synechococcus elongatus
PCC 7942]
gi|81168317|gb|ABB56657.1| Single-stranded nucleic acid binding R3H [Synechococcus elongatus
PCC 7942]
Length = 588
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/221 (60%), Positives = 163/221 (73%), Gaps = 7/221 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A++ +I D L RPGVGKTT +RE+ARVL+D+ KRVVI
Sbjct: 117 VIGLTCRVGRAVFGTVGMIRDLVETGQSLLFLGRPGVGKTTALREVARVLADDLLKRVVI 176
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
+DTSNEI GDGDIPH AIG ARR+QV P LQH+VMIEAVENHMPEVII+DEIGTE EA
Sbjct: 177 IDTSNEIAGDGDIPHPAIGRARRLQVARPELQHQVMIEAVENHMPEVIIIDEIGTELEAL 236
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ +VTLGD+EAR R QK++LERK
Sbjct: 237 AARTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQSVTLGDDEARRRGSQKTVLERK 296
Query: 181 APPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIR 220
APPTF +EM ER+ WV H+ +VD+LLR P ++R
Sbjct: 297 APPTFEIAVEMLERYRWVVHEDVANTVDLLLRQGQPNPQVR 337
>gi|269925800|ref|YP_003322423.1| single-stranded nucleic acid binding R3H domain-containing protein
[Thermobaculum terrenum ATCC BAA-798]
gi|269789460|gb|ACZ41601.1| single-stranded nucleic acid binding R3H domain protein
[Thermobaculum terrenum ATCC BAA-798]
Length = 551
Score = 267 bits (683), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 134/200 (67%), Positives = 159/200 (79%), Gaps = 1/200 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTT++RE+ARVLS++ +KRV+IVDTSNEI GDGDIPH AIG ARRMQVP PS+QH
Sbjct: 143 RPGVGKTTMLREVARVLSEDLRKRVIIVDTSNEIAGDGDIPHPAIGRARRMQVPTPSMQH 202
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV LIGTAHG LEN++ NP LSDL
Sbjct: 203 AVMIEAVENHMPEVIIIDEIGTELEAAAARTIAERGVQLIGTAHGNTLENLMMNPTLSDL 262
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 212
IGG+ +VTLGDEEA+ R QKSILERKAPPTF L+E+++R H ++VD +LRG
Sbjct: 263 IGGIQSVTLGDEEAKRRGTQKSILERKAPPTFNILVEIQDRDRVAIHPDVAETVDAILRG 322
Query: 213 KTPLVEIRKRDDRFNVVVDR 232
E+R RD V ++R
Sbjct: 323 YEIKPEVRWRDATGKVHIER 342
>gi|78211931|ref|YP_380710.1| ATPase [Synechococcus sp. CC9605]
gi|78196390|gb|ABB34155.1| ATPase [Synechococcus sp. CC9605]
Length = 546
Score = 266 bits (681), Expect = 4e-69, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 158/223 (70%), Gaps = 7/223 (3%)
Query: 6 NVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVV 59
+V L + A++ ++ D L RPGVGKTT +REIARVL+DE ++RVV
Sbjct: 100 DVVGLTCRVGRAVFGTVAMVRDLLDGGQSLLLMGRPGVGKTTALREIARVLADELERRVV 159
Query: 60 IVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 119
++DTSNEI GDGDIPH AIG ARRMQV P LQH+ MIEAVENHMPEVI++DEIGTE EA
Sbjct: 160 VIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQTMIEAVENHMPEVIVIDEIGTELEA 219
Query: 120 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILER 179
A R+IAERGV+L+ TAHG L N+IKNP LSDL+GG+ VTLGDEEAR RR QK++LER
Sbjct: 220 QAARTIAERGVVLVATAHGNALANLIKNPTLSDLVGGIQAVTLGDEEARRRRSQKTVLER 279
Query: 180 KAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 221
A PTF +EM R W H +VD LLRG P V+ R+
Sbjct: 280 AAEPTFPVAVEMHSRQRWAVHTDVAATVDQLLRGLKPRVQERE 322
>gi|270308090|ref|YP_003330148.1| R3H domain-containing protein [Dehalococcoides sp. VS]
gi|270153982|gb|ACZ61820.1| R3H domain protein [Dehalococcoides sp. VS]
Length = 537
Score = 266 bits (681), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/232 (58%), Positives = 170/232 (73%), Gaps = 7/232 (3%)
Query: 10 LIVKFFYALYSINKIIFDFFLS------YFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L ++ A++ KII D S RPGVGKTT++RE+ARVL+ + +KRVVIVDT
Sbjct: 131 LTLRVGRAVFGTIKIIQDLIQSGQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDT 190
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P +QH VMIEAVENHMP+VI++DEIGTE EA A R
Sbjct: 191 SNEIAGDGDIPHPAIGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAAR 250
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG L+N++ NP LSDLIGG+ +VTLGDEEAR R QK+ILER+APP
Sbjct: 251 TIAERGVQLVGTAHGNVLDNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPP 310
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 234
TF ++E++ER+ H +VD +LRG +P EIR D+ VV+ + +
Sbjct: 311 TFQVIVEIQERNKVAVHPDVGAAVDSILRGVSPSSEIRYLDENGEVVISKQQ 362
>gi|33866596|ref|NP_898155.1| hypothetical protein SYNW2064 [Synechococcus sp. WH 8102]
gi|33633374|emb|CAE08579.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 543
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 130/223 (58%), Positives = 159/223 (71%), Gaps = 7/223 (3%)
Query: 6 NVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVV 59
+V L + A++ ++ D L RPGVGKTT +REIARVL+D+ Q+RVV
Sbjct: 100 DVVGLTCRVGRAVFGTVALVRDLLDGGQSLLLMGRPGVGKTTALREIARVLADDLQRRVV 159
Query: 60 IVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 119
++DTSNEI GDGDIPH AIG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 160 VIDTSNEIAGDGDIPHPAIGRARRMQVARPEQQHQVMIEAVENHMPEVIVIDEIGTELEA 219
Query: 120 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILER 179
A R+IAERGVML+ TAHG L N+IKNP LSDL+GG+ +VTLGD+EAR RR QK++LER
Sbjct: 220 QAARTIAERGVMLVATAHGNALANLIKNPTLSDLVGGIQSVTLGDDEARRRRSQKTVLER 279
Query: 180 KAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRK 221
A PTF +EM R W H +VD LLRG P ++ R+
Sbjct: 280 AAEPTFPVAVEMHSRQRWAVHTDVASTVDQLLRGLPPRIQERE 322
>gi|57234427|ref|YP_181509.1| R3H domain-containing protein [Dehalococcoides ethenogenes 195]
gi|57224875|gb|AAW39932.1| R3H domain protein [Dehalococcoides ethenogenes 195]
Length = 509
Score = 266 bits (680), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 135/235 (57%), Positives = 171/235 (72%), Gaps = 7/235 (2%)
Query: 10 LIVKFFYALYSINKIIFDFFLS------YFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L ++ A++ KII D S RPGVGKTT++RE+ARVL+ + +KRVVIVDT
Sbjct: 103 LTLRVGRAVFGTIKIIQDLIQSGQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDT 162
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P +QH VMIEAVENHMP+VI++DEIGTE EA A R
Sbjct: 163 SNEIAGDGDIPHPAIGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAAR 222
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG L+N++ NP LSDLIGG+ +VTLGDEEAR R QK+ILER+APP
Sbjct: 223 TIAERGVQLVGTAHGNVLDNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPP 282
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 237
TF ++E++ER+ H +VD +LRG +P EIR D+ VV+ + + +
Sbjct: 283 TFQVIVEIQERNKVAVHPDVGAAVDSILRGVSPSSEIRYLDENGEVVISKQQPSE 337
>gi|33863996|ref|NP_895556.1| ATPase AAA [Prochlorococcus marinus str. MIT 9313]
gi|33635580|emb|CAE21904.1| AAA ATPase superfamily [Prochlorococcus marinus str. MIT 9313]
Length = 545
Score = 266 bits (680), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 132/226 (58%), Positives = 160/226 (70%), Gaps = 7/226 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQK 56
R R V L + A++ ++ D L RPGVGKTT +REIARVL+D+ Q+
Sbjct: 97 RQREVVGLTCRVGRAVFGTVAMVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADDLQR 156
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVV++DTSNEI GDGDIPH AIG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 157 RVVVIDTSNEIAGDGDIPHPAIGRARRMQVSLPEQQHQVMIEAVENHMPEVIVIDEIGTE 216
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+ TAHG L N+IKNP LSDL+GG+ VTLGDEEAR RR QK++
Sbjct: 217 LEAQAARTIAERGVQLVATAHGNALANLIKNPTLSDLVGGIQAVTLGDEEARRRRTQKTV 276
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 221
LER A PTF +EM R+ W H +VD LLRG+ P ++R+
Sbjct: 277 LERAAEPTFPVAVEMNTRNRWSIHADVAATVDQLLRGQLPRPQLRE 322
>gi|124023992|ref|YP_001018299.1| ATPase AAA [Prochlorococcus marinus str. MIT 9303]
gi|123964278|gb|ABM79034.1| AAA ATPase superfamily protein [Prochlorococcus marinus str. MIT
9303]
Length = 545
Score = 266 bits (679), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 133/233 (57%), Positives = 163/233 (69%), Gaps = 7/233 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQK 56
R R V L + A++ ++ D L RPGVGKTT +REIARVL+D+ Q+
Sbjct: 97 RQREVVGLTCRVGRAVFGTVAMVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADDLQR 156
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVV++DTSNEI GDGDIPH AIG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE
Sbjct: 157 RVVVIDTSNEIAGDGDIPHPAIGRARRMQVSLPEQQHQVMIEAVENHMPEVIVIDEIGTE 216
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV L+ TAHG L N+IKNP LSDL+GG+ VTLGDEEAR RR QK++
Sbjct: 217 LEAQAARTIAERGVQLVATAHGNALPNLIKNPTLSDLVGGIQAVTLGDEEARRRRTQKTV 276
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNV 228
LER A PTF +E+ R+ W H +VD LLRG+ P ++R+ D +V
Sbjct: 277 LERAAEPTFPVAVEINTRNRWSIHADVAATVDQLLRGQLPRPQLRELDSDGSV 329
>gi|260436547|ref|ZP_05790517.1| ATPase [Synechococcus sp. WH 8109]
gi|260414421|gb|EEX07717.1| ATPase [Synechococcus sp. WH 8109]
Length = 546
Score = 266 bits (679), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 157/223 (70%), Gaps = 7/223 (3%)
Query: 6 NVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVV 59
V L + A++ ++ D L RPGVGKTT +REIARVL+DE ++RVV
Sbjct: 100 EVVGLTCRVGRAVFGTVAMVRDLLDGGQSLLLMGRPGVGKTTALREIARVLADELERRVV 159
Query: 60 IVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 119
++DTSNEI GDGDIPH AIG ARRMQV P LQH+ MIEAVENHMPEVI++DEIGTE EA
Sbjct: 160 VIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQTMIEAVENHMPEVIVIDEIGTELEA 219
Query: 120 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILER 179
A R+IAERGV+L+ TAHG L N+IKNP LSDL+GG+ VTLGDEEAR RR QK++LER
Sbjct: 220 QAARTIAERGVVLVATAHGNALANLIKNPTLSDLVGGIQAVTLGDEEARRRRSQKTVLER 279
Query: 180 KAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 221
A PTF +EM R W H +VD LLRG P V+ R+
Sbjct: 280 AAEPTFPVAVEMHSRQRWAVHTDVAATVDQLLRGLKPRVQERE 322
>gi|269836978|ref|YP_003319206.1| single-stranded nucleic acid binding R3H domain-containing protein
[Sphaerobacter thermophilus DSM 20745]
gi|269786241|gb|ACZ38384.1| single-stranded nucleic acid binding R3H domain protein
[Sphaerobacter thermophilus DSM 20745]
Length = 573
Score = 265 bits (678), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 135/234 (57%), Positives = 167/234 (71%), Gaps = 7/234 (2%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A+Y I+ D L RPGVGKTT++RE ARVL+D+ KRV+IVDT
Sbjct: 121 LTCRIGRAVYGTIGIVRDLVESGESLLLLGRPGVGKTTMLRETARVLADDLGKRVIIVDT 180
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH +IG ARRMQVP P++QH VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 181 SNEIAGDGDIPHPSIGRARRMQVPTPAMQHAVMIEAVENHMPEVIVIDEIGTELEAAAAR 240
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG LEN++ NP LSDLIGG+ +VTL DEEAR R QKSILERKAPP
Sbjct: 241 TIAERGVQLVGTAHGNTLENLMMNPTLSDLIGGIQSVTLSDEEARRRGTQKSILERKAPP 300
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTY 236
TF ++E++ R ++ +VD +LRG+ VE+R+R +V V + Y
Sbjct: 301 TFTMMVEIQARDRVAVYRDVASAVDAILRGQPLRVEVRQRAPDGSVTVTYEQPY 354
>gi|168013314|ref|XP_001759346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689659|gb|EDQ76030.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 546
Score = 265 bits (678), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 156/203 (76%), Gaps = 1/203 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT +REIAR+L+DE+ KRVVIVDTSNEI GDGDIPH+ IG ARRMQVP+ LQHK
Sbjct: 97 PGVGKTTAIREIARMLADEYHKRVVIVDTSNEIAGDGDIPHAGIGMARRMQVPKVDLQHK 156
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMP+VI++DEIGTE EA A +IA+RGV L+GTAHG +EN+IKNP L +L
Sbjct: 157 VMIEAVENHMPQVIVIDEIGTELEAVAAGTIAQRGVQLVGTAHGMTVENLIKNPSLQNLA 216
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEAR RR QKS+LER+ PP F EM R W H++ +VD LL GK
Sbjct: 217 GGIQSVTLGDEEARRRRVQKSVLERQGPPVFTSACEMISRTEWRVHRSLAATVDALLAGK 276
Query: 214 TPLVEIRKRDDRFNVVVDRWKTY 236
+P VE+RK ++ VVV Y
Sbjct: 277 SPRVEVRKMNENGQVVVGNLAEY 299
>gi|156743650|ref|YP_001433779.1| single-stranded nucleic acid binding R3H domain-containing protein
[Roseiflexus castenholzii DSM 13941]
gi|156234978|gb|ABU59761.1| single-stranded nucleic acid binding R3H domain protein
[Roseiflexus castenholzii DSM 13941]
Length = 538
Score = 265 bits (677), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 139/236 (58%), Positives = 166/236 (70%), Gaps = 9/236 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQK 56
R V L + A++ I+ D L RPGVGKTT++RE ARVL++E +K
Sbjct: 99 RTGRVIGLTCRVGRAVFGTITILRDLIESGKSVLLLGRPGVGKTTMLRETARVLAEELRK 158
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVIVDTSNEI GDGDIPH IG ARRMQVP PS QH VMIEAVENHMPEVI++DEIGTE
Sbjct: 159 RVVIVDTSNEIAGDGDIPHPGIGRARRMQVPRPSEQHAVMIEAVENHMPEVIVIDEIGTE 218
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV LIGTAHG+ LEN++ NP LSDLIGG+ VTLGDEEAR R QK++
Sbjct: 219 LEALAARTIAERGVQLIGTAHGQTLENLLSNPTLSDLIGGIQAVTLGDEEARRRGTQKTV 278
Query: 177 LERKAPPTFYFLIEMRE-RHYWVTHKTEKSVDMLLRGKTPLVEIRKR--DDRFNVV 229
LERKAPPTF L+E++ V +VD LLR ++P E+R+R D + VV
Sbjct: 279 LERKAPPTFDILVEIQNWDQVTVYPDVASAVDNLLRAESPRAEVRRRAADGQIEVV 334
>gi|71842246|ref|YP_277334.1| hypothetical chloroplast RF45 [Emiliania huxleyi]
gi|60101489|gb|AAX13833.1| hypothetical chloroplast RF45 [Emiliania huxleyi]
gi|336286160|gb|AEI29496.1| hypothetical chloroplast RF45 [Emiliania huxleyi]
Length = 558
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 137/229 (59%), Positives = 164/229 (71%), Gaps = 9/229 (3%)
Query: 2 LRLRN--VFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDE 53
LR RN V L + A++ II D L RPGVGKTT +REIARVLSD+
Sbjct: 91 LRNRNGGVIGLTCRIGRAIFGTVNIICDLLEKRKSILLLGRPGVGKTTAIREIARVLSDD 150
Query: 54 FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 113
KRV+I+DTSNEI GDGD+PH +IG ARRMQV P QH+VMIEAVENHMPE+II+DEI
Sbjct: 151 MNKRVIIIDTSNEIAGDGDLPHPSIGKARRMQVRNPQNQHQVMIEAVENHMPEIIIIDEI 210
Query: 114 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ 173
GTE EA A R+IAERGV L+GTAHG L+N+IKNP L+DLIGG+ VTLGDEEAR R
Sbjct: 211 GTELEATAARTIAERGVQLVGTAHGSALDNLIKNPTLTDLIGGIQYVTLGDEEARRRGSS 270
Query: 174 KSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRK 221
KSILERKAPPTF +E+ WV H E+SVD+LL+G+ ++ R+
Sbjct: 271 KSILERKAPPTFEIAVEIHNVKTWVIHDNIERSVDLLLQGQNLALQKRE 319
>gi|452203573|ref|YP_007483706.1| R3H domain-containing protein [Dehalococcoides mccartyi DCMB5]
gi|452110632|gb|AGG06364.1| R3H domain-containing protein [Dehalococcoides mccartyi DCMB5]
Length = 509
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/232 (57%), Positives = 169/232 (72%), Gaps = 7/232 (3%)
Query: 10 LIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L ++ A++ KII D L RPGVGKTT++RE+ARVL+ + +KRVVIVDT
Sbjct: 103 LTLRVGRAVFGTIKIIQDLIKSDQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDT 162
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P +QH VMIEAVENHMP+VI++DEIGTE EA A R
Sbjct: 163 SNEIAGDGDIPHPAIGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAAR 222
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG L+N++ NP LSDLIGG+ +VTLGDEEAR R QK+ILER+APP
Sbjct: 223 TIAERGVQLVGTAHGNVLDNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPP 282
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 234
TF ++E+++R+ H +VD +LRG +P EIR D VV+ + +
Sbjct: 283 TFQVIVEIQDRNKVAVHPDVGAAVDSILRGVSPSAEIRYLDGNGEVVISKQQ 334
>gi|452205008|ref|YP_007485137.1| R3H domain-containing protein [Dehalococcoides mccartyi BTF08]
gi|452112064|gb|AGG07795.1| R3H domain-containing protein [Dehalococcoides mccartyi BTF08]
Length = 509
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/232 (57%), Positives = 169/232 (72%), Gaps = 7/232 (3%)
Query: 10 LIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L ++ A++ KII D L RPGVGKTT++RE+ARVL+ + +KRVVIVDT
Sbjct: 103 LTLRVGRAVFGTIKIIQDLIKSDQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDT 162
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P +QH VMIEAVENHMP+VI++DEIGTE EA A R
Sbjct: 163 SNEIAGDGDIPHPAIGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAAR 222
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG L+N++ NP LSDLIGG+ +VTLGDEEAR R QK+ILER+APP
Sbjct: 223 TIAERGVQLVGTAHGNVLDNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPP 282
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 234
TF ++E+++R+ H +VD +LRG +P EIR D VV+ + +
Sbjct: 283 TFQVIVEIQDRNKVAVHPDVGAAVDSILRGVSPSAEIRYLDGNGEVVISKQQ 334
>gi|352096524|ref|ZP_08957351.1| single-stranded nucleic acid binding R3H domain-containing protein
[Synechococcus sp. WH 8016]
gi|351676174|gb|EHA59328.1| single-stranded nucleic acid binding R3H domain-containing protein
[Synechococcus sp. WH 8016]
Length = 543
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 157/218 (72%), Gaps = 6/218 (2%)
Query: 5 RNVFLLIVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTS 64
R VF + LYS ++ RPGVGKTT +REIARVLSD+ KRVV++DTS
Sbjct: 110 RAVFGTVAMVRDLLYSGESLLL-----MGRPGVGKTTALREIARVLSDDLGKRVVVIDTS 164
Query: 65 NEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 124
NEI GDGDIPH AIG ARRMQV P LQH VMIEAVENHMPEVI++DEIGTE EA A R+
Sbjct: 165 NEIAGDGDIPHPAIGRARRMQVARPELQHHVMIEAVENHMPEVIVIDEIGTELEARAART 224
Query: 125 IAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPT 184
IAERGV L+ TAHG L N+IKNP L DLIGG+++VTLGD+EAR RR QK++LER A PT
Sbjct: 225 IAERGVTLVATAHGNALSNLIKNPTLCDLIGGIESVTLGDDEARRRRSQKTVLERAAEPT 284
Query: 185 FYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 221
F +E+ R +W ++ ++VD LLRG P E RK
Sbjct: 285 FSMAVEIHSRSHWAVYREVGRAVDALLRGHVPSPEERK 322
>gi|73748587|ref|YP_307826.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dehalococcoides sp. CBDB1]
gi|289432613|ref|YP_003462486.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dehalococcoides sp. GT]
gi|73660303|emb|CAI82910.1| single-stranded nucleic acid binding R3H domain protein
[Dehalococcoides sp. CBDB1]
gi|288946333|gb|ADC74030.1| single-stranded nucleic acid binding R3H domain protein
[Dehalococcoides sp. GT]
Length = 509
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/232 (57%), Positives = 169/232 (72%), Gaps = 7/232 (3%)
Query: 10 LIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L ++ A++ KII D L RPGVGKTT++RE+ARVL+ + +KRVVIVDT
Sbjct: 103 LTLRVGRAVFGTIKIIQDLIKSDQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDT 162
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P +QH VMIEAVENHMP+VI++DEIGTE EA A R
Sbjct: 163 SNEIAGDGDIPHPAIGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAAR 222
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG L+N++ NP LSDLIGG+ +VTLGDEEAR R QK+ILER+APP
Sbjct: 223 TIAERGVQLVGTAHGNVLDNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPP 282
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 234
TF ++E+++R+ H +VD +LRG +P EIR D VV+ + +
Sbjct: 283 TFQVIVEIQDRNKVAVHPDVGAAVDSILRGVSPSAEIRYLDGNGEVVISKQQ 334
>gi|300087975|ref|YP_003758497.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527708|gb|ADJ26176.1| single-stranded nucleic acid binding R3H domain protein
[Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 512
Score = 265 bits (676), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 136/229 (59%), Positives = 162/229 (70%), Gaps = 7/229 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDFFLS------YFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L V+ A+Y KII D S RPGVGKTT++RE ARVL+D+ +KRVVI
Sbjct: 100 VIGLTVRVGRAVYGTIKIIDDLIQSGQSVLLMGRPGVGKTTMLRETARVLADDLRKRVVI 159
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
VDTSNEI GDGDIPH AIG ARRMQV P QH VMIEAVENHMPEV+++DEIGTE EA
Sbjct: 160 VDTSNEIAGDGDIPHPAIGRARRMQVKSPERQHAVMIEAVENHMPEVVVIDEIGTELEAQ 219
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+GTAHG L N+++NP L+DLIGG+ VTLGDEEAR R QK++LERK
Sbjct: 220 AARTIAERGVQLVGTAHGNTLANLMQNPTLADLIGGIQAVTLGDEEARRRGTQKTVLERK 279
Query: 181 APPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNV 228
+PPTF ++E++ER H +VD +LRG P EIR D V
Sbjct: 280 SPPTFNVVVEIQERDQVAVHPNVSVTVDAILRGLHPETEIRSLGDDGQV 328
>gi|147669347|ref|YP_001214165.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dehalococcoides sp. BAV1]
gi|146270295|gb|ABQ17287.1| single-stranded nucleic acid binding R3H domain protein
[Dehalococcoides sp. BAV1]
Length = 509
Score = 264 bits (675), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 134/232 (57%), Positives = 169/232 (72%), Gaps = 7/232 (3%)
Query: 10 LIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L ++ A++ KII D L RPGVGKTT++RE+ARVL+ + +KRVVIVDT
Sbjct: 103 LTLRVGRAVFGTIKIIQDLIKSDQSVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDT 162
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P +QH VMIEAVENHMP+VI++DEIGTE EA A R
Sbjct: 163 SNEIAGDGDIPHPAIGHARRMQVRTPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAAR 222
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV L+GTAHG L+N++ NP LSDLIGG+ +VTLGDEEAR R QK+ILER+APP
Sbjct: 223 TIAERGVQLVGTAHGNVLDNLMLNPTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPP 282
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 234
TF ++E+++R+ H +VD +LRG +P EIR D VV+ + +
Sbjct: 283 TFQVIVEIQDRNKVAVHPDVGAAVDSILRGVSPSAEIRYLDGNGEVVISKQQ 334
>gi|113954993|ref|YP_729670.1| R3H domain-containing protein [Synechococcus sp. CC9311]
gi|113882344|gb|ABI47302.1| R3H domain protein [Synechococcus sp. CC9311]
Length = 548
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 131/222 (59%), Positives = 159/222 (71%), Gaps = 7/222 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A++ ++ D L RPGVGKTT +REIARVL+D+ KRVV+
Sbjct: 101 VVGLTCRVGRAVFGTVAMVRDLLDSGESLLLMGRPGVGKTTALREIARVLADDLGKRVVV 160
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 161 IDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVENHMPEVIVIDEIGTELEAR 220
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+ TAHG L N+IKNP L DLIGG+++VTLGD+EAR RR QK++LER
Sbjct: 221 AARTIAERGVTLVATAHGNALSNLIKNPTLCDLIGGIESVTLGDDEARRRRSQKTVLERA 280
Query: 181 APPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 221
A PTF +EM R W ++ ++VD LLRG+ P E RK
Sbjct: 281 AEPTFSMAVEMHSRSRWAVYREVGRAVDALLRGQLPSPEERK 322
>gi|374249429|ref|YP_005088648.1| ycf45 gene product [Phaeocystis antarctica]
gi|340008120|gb|AEK26752.1| Ycf45 [Phaeocystis antarctica]
Length = 551
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 134/245 (54%), Positives = 169/245 (68%), Gaps = 7/245 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQK 56
R N+ L + A++ II D L +PGVGKTT +REIARVLSD +K
Sbjct: 94 RQGNIIGLTCRIGRAVFGTVSIIRDLLENKKSILLLGKPGVGKTTAIREIARVLSDGMKK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RV+I+DTSNEI GDGD+PH +IG ARRMQV QH++MIEAVENHMPE+II+DEIGTE
Sbjct: 154 RVIIIDTSNEIAGDGDLPHPSIGKARRMQVSSTKNQHEIMIEAVENHMPEIIIIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV LIGTAHG LEN+IKNP ++DLIGG+ VTLGDEEA+ R KSI
Sbjct: 214 LEATAARTIAERGVQLIGTAHGNALENLIKNPTITDLIGGIQYVTLGDEEAKRRGSAKSI 273
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 235
LERK PPTF +E+ + WV H SVD+LLRG+ PL++ R +V + +
Sbjct: 274 LERKTPPTFDIAVEIHDSQTWVIHDNIGNSVDLLLRGQNPLLQKRNLTSGQDVNIHCEIS 333
Query: 236 YDRHD 240
Y++++
Sbjct: 334 YNKNE 338
>gi|188584674|ref|YP_001916219.1| ATPase AAA [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349361|gb|ACB83631.1| AAA ATPase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 445
Score = 263 bits (671), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 141/242 (58%), Positives = 166/242 (68%), Gaps = 14/242 (5%)
Query: 10 LIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A+Y II D L RPGVGKTT++RE AR+L+DEF+KRV+IVDT
Sbjct: 102 LTCRVGKAVYGTADIIRDIVERGDKTLLLGRPGVGKTTILREAARILADEFRKRVIIVDT 161
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV P QH VMIEAVENHMPEVII+DEIGT EA A R
Sbjct: 162 SNEIAGDGDIPHPAIGHARRMQVKTPDKQHDVMIEAVENHMPEVIIIDEIGTYQEAEAAR 221
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV LI TAHG LEN+I NP LS+LIGG+DTVTLGDEEA+ R QK++LERKAP
Sbjct: 222 TIAERGVQLIATAHGNTLENLILNPTLSELIGGIDTVTLGDEEAKRRNSQKTVLERKAPS 281
Query: 184 TFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEI--RKRDDRFNV-----VVDRWKT 235
TF ++E+ +R+ H EK VD +LRG P EI RK D + + + D W
Sbjct: 282 TFDAVVEIFDRNTLKIHAPLEKVVDYILRGGAPRPEIRLRKNDGQHEIIQNSNITDEWNE 341
Query: 236 YD 237
D
Sbjct: 342 MD 343
>gi|292490546|ref|YP_003525985.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nitrosococcus halophilus Nc4]
gi|291579141|gb|ADE13598.1| single-stranded nucleic acid binding R3H domain protein
[Nitrosococcus halophilus Nc4]
Length = 500
Score = 263 bits (671), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 131/188 (69%), Positives = 149/188 (79%), Gaps = 1/188 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DEF KRV+I+DTSNEI GDGDIPH AIG+ARRMQVP
Sbjct: 128 LLLLGRPGVGKTTRLREIARVLADEFGKRVIIIDTSNEIAGDGDIPHPAIGSARRMQVPH 187
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P QH VMIEAVENHMPEVIIVDEIGT AEA A R+IAERGV LIGTAHG LEN++ NP
Sbjct: 188 PERQHGVMIEAVENHMPEVIIVDEIGTGAEATAARTIAERGVQLIGTAHGNTLENLVMNP 247
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVD 207
L+DL+GGV TVTLGD+EAR R QK+I ERKAPPTF ++E+ +R + H T +VD
Sbjct: 248 TLADLVGGVQTVTLGDDEARLRGTQKTINERKAPPTFDAVVEIVDREAVIVHPDTAGAVD 307
Query: 208 MLLRGKTP 215
LLRG P
Sbjct: 308 KLLRGLDP 315
>gi|148657339|ref|YP_001277544.1| single-stranded nucleic acid binding R3H domain-containing protein
[Roseiflexus sp. RS-1]
gi|148569449|gb|ABQ91594.1| single-stranded nucleic acid binding R3H domain protein
[Roseiflexus sp. RS-1]
Length = 538
Score = 262 bits (670), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 135/227 (59%), Positives = 161/227 (70%), Gaps = 7/227 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQK 56
R V L + A++ I+ D L RPGVGKTT++RE ARVL+++ +K
Sbjct: 99 RTGRVIGLTCRVGRAVFGTITILRDLIESGKSVLLLGRPGVGKTTMLRETARVLAEDLRK 158
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVIVDTSNEI GDGDIPH IG ARRMQVP PS QH VMIEAVENHMPEVI++DEIGTE
Sbjct: 159 RVVIVDTSNEIAGDGDIPHPGIGRARRMQVPRPSEQHAVMIEAVENHMPEVIVIDEIGTE 218
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+IAERGV LIGTAHG+ LEN++ NP LSDLIGG+ VTLGDEEAR R QK++
Sbjct: 219 LEALAARTIAERGVQLIGTAHGQTLENLLSNPTLSDLIGGIQAVTLGDEEARRRGTQKTV 278
Query: 177 LERKAPPTFYFLIEMRE-RHYWVTHKTEKSVDMLLRGKTPLVEIRKR 222
LERKAPPTF L+E++ V +VD LLR + P E+R+R
Sbjct: 279 LERKAPPTFDILVEIQNWDQVTVYPDVASAVDSLLRSEPPQAEVRRR 325
>gi|356575518|ref|XP_003555887.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 667
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/194 (66%), Positives = 156/194 (80%), Gaps = 1/194 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DEF+KRVVIVDTSNEIGGDGD+PH+ IG ARRMQVP ++QH
Sbjct: 198 PGVGKTTLIREIARMLADEFRKRVVIVDTSNEIGGDGDVPHAGIGRARRMQVPNVNMQHN 257
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAHG +ENIIKNP L L+
Sbjct: 258 VMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIENIIKNPYLQILV 317
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKTEKSVDMLLRGK 213
GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM + V H+ + +VD +L GK
Sbjct: 318 GGIESVTLGDEEARKRKVQKTILERKGPPTFSCAVEMISKTECRVHHRLDATVDAILAGK 377
Query: 214 TPLVEIRKRDDRFN 227
PL EIR+ DD N
Sbjct: 378 PPLFEIRQWDDSDN 391
>gi|56750908|ref|YP_171609.1| hypothetical protein syc0899_c [Synechococcus elongatus PCC 6301]
gi|56685867|dbj|BAD79089.1| hypothetical protein YCF45 [Synechococcus elongatus PCC 6301]
Length = 588
Score = 262 bits (669), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 132/221 (59%), Positives = 161/221 (72%), Gaps = 7/221 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A++ +I D L RP VGKTT +RE+ARVL+D+ KRVVI
Sbjct: 117 VIGLTCRVGRAVFGTVGMIRDLVETGQSLLFLGRPDVGKTTALREVARVLADDLLKRVVI 176
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
+DTSNEI GDGDIPH AIG ARR+QV P LQH+VMIEAVENHMPEVII+DEIGTE EA
Sbjct: 177 IDTSNEIAGDGDIPHPAIGRARRLQVARPELQHQVMIEAVENHMPEVIIIDEIGTELEAL 236
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+GTAHG +EN+IKNP LSDL+GG+ +VTLGD+EAR R QK++LERK
Sbjct: 237 AARTIAERGVQLVGTAHGNQIENLIKNPTLSDLVGGIQSVTLGDDEARRRGSQKTVLERK 296
Query: 181 APPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIR 220
APPTF +EM ER+ WV H+ +V +LLR P ++R
Sbjct: 297 APPTFEIAVEMLERYRWVVHEDVANTVGLLLRQGQPNPQVR 337
>gi|77166422|ref|YP_344947.1| single-stranded nucleic acid binding R3H [Nitrosococcus oceani ATCC
19707]
gi|254436235|ref|ZP_05049742.1| R3H domain protein [Nitrosococcus oceani AFC27]
gi|76884736|gb|ABA59417.1| Single-stranded nucleic acid binding R3H [Nitrosococcus oceani ATCC
19707]
gi|207089346|gb|EDZ66618.1| R3H domain protein [Nitrosococcus oceani AFC27]
Length = 496
Score = 261 bits (667), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/190 (69%), Positives = 148/190 (77%), Gaps = 1/190 (0%)
Query: 27 DFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 86
D L RPGVGKTT +REIARVL+DEF KRVVIVDTSNEIGGDGDIPH AIG+ARRMQV
Sbjct: 122 DNLLLLGRPGVGKTTRLREIARVLADEFGKRVVIVDTSNEIGGDGDIPHPAIGSARRMQV 181
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
P QH VMIEAVENHMPEVIIVDEIGT +EA A R+IAERGV LIGTAHG LEN++
Sbjct: 182 SHPEQQHGVMIEAVENHMPEVIIVDEIGTTSEATAARTIAERGVQLIGTAHGNTLENLVM 241
Query: 147 NPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKS 205
NP L+DL+GGV VTLGD+EAR RR QK+I ERKA PTF ++E+ R + H T +
Sbjct: 242 NPTLADLVGGVQAVTLGDDEARLRRTQKTIRERKALPTFDAVVEIVNREVMIVHPDTAGA 301
Query: 206 VDMLLRGKTP 215
VD LLRG P
Sbjct: 302 VDKLLRGLGP 311
>gi|309792154|ref|ZP_07686626.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillochloris trichoides DG-6]
gi|308225695|gb|EFO79451.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillochloris trichoides DG6]
Length = 552
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/227 (59%), Positives = 160/227 (70%), Gaps = 13/227 (5%)
Query: 7 VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A++ II D L +PG GKTT++RE ARVL++EF+KRVVI
Sbjct: 103 VIGLTCRVGRAIFGTVTIIRDLVETGKSILLLGKPGTGKTTLLRETARVLAEEFRKRVVI 162
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
VDTSNEI GDGDIPH IG ARRMQVP P+ QH VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 163 VDTSNEIAGDGDIPHPGIGRARRMQVPRPAEQHAVMIEAVENHMPEVIVIDEIGTELEAM 222
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+GTAHG L+N++ NP LSDL+GG+ VTLGDEEAR R QK++LERK
Sbjct: 223 AARTIAERGVQLVGTAHGNTLDNLMINPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERK 282
Query: 181 APPTFYFLIEMRERHYW----VTHKTEKSVDMLLRGKTPLVEIRKRD 223
APPTF LIE+ W V +VD +LRG+ P E+R RD
Sbjct: 283 APPTFDILIEI---ESWDSVTVYDDVAAAVDAILRGEDPPAELRSRD 326
>gi|443474815|ref|ZP_21064783.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena biceps PCC 7429]
gi|443020404|gb|ELS34366.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena biceps PCC 7429]
Length = 591
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 137/233 (58%), Positives = 162/233 (69%), Gaps = 8/233 (3%)
Query: 10 LIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A+Y +I D L +PG+GKTT +REIARVL+D+ KRVVI+D+
Sbjct: 106 LTCRVGRAVYGTIAMIRDLVETGKSILLLGKPGMGKTTALREIARVLADDLNKRVVIIDS 165
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGDIPH AIG ARRMQV +P LQH+VMIEAVENHMPEVI++DEIGTE EA A R
Sbjct: 166 SNEIAGDGDIPHPAIGRARRMQVSQPELQHQVMIEAVENHMPEVIVIDEIGTELEALAAR 225
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRC-QKSILERKAP 182
+IAERGV L+GTAHG L N+IKNP LSDLIGG+ +VTLGDEE R R QKSILERKA
Sbjct: 226 TIAERGVQLVGTAHGNQLANLIKNPTLSDLIGGIQSVTLGDEEMRRRGLPQKSILERKAQ 285
Query: 183 PTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWK 234
PTF +EM ER+ W H ++DMLLR + P +IR D V K
Sbjct: 286 PTFDIAVEMWERYRWAVHTDVAGTIDMLLRDRDPGRQIRAVSDAGEVTTTEEK 338
>gi|206901965|ref|YP_002250502.1| single-stranded nucleic acid binding R3H [Dictyoglomus thermophilum
H-6-12]
gi|206741068|gb|ACI20126.1| single-stranded nucleic acid binding R3H [Dictyoglomus thermophilum
H-6-12]
Length = 515
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/190 (67%), Positives = 151/190 (79%), Gaps = 1/190 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTT++RE ARVL+DE KRV+I+DTSNEIGGDGDIPH AIG ARRMQVP P+ QH
Sbjct: 136 RPGVGKTTLLRETARVLADELGKRVIIIDTSNEIGGDGDIPHPAIGRARRMQVPNPAKQH 195
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAHG L+N++ NP LSDL
Sbjct: 196 DVMIEAVENHMPEVIVIDEIGTELEAKAARTIAERGVQLIGTAHGITLQNLLLNPTLSDL 255
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLRG 212
+GG+ VTL DEEA+ R QK++LERKAPPTF +IE++ER + H K+VD LLRG
Sbjct: 256 VGGIQVVTLSDEEAKRRGTQKTVLERKAPPTFQVVIEIQERDRLAIHHDVAKTVDALLRG 315
Query: 213 KTPLVEIRKR 222
EIR R
Sbjct: 316 YIIKPEIRLR 325
>gi|383761637|ref|YP_005440619.1| hypothetical protein CLDAP_06820 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381905|dbj|BAL98721.1| hypothetical protein CLDAP_06820 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 542
Score = 260 bits (665), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 139/241 (57%), Positives = 174/241 (72%), Gaps = 9/241 (3%)
Query: 6 NVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVV 59
+V L + A+Y +II D L RPGVGKTT++RE AR+ S+ KRVV
Sbjct: 100 DVIGLTCRVGRAVYGAIEIIKDIVNSDRSILLLGRPGVGKTTLLREAARLRSE--VKRVV 157
Query: 60 IVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 119
IVDTSNEI GDGDIPH AIG +RRMQVP+PSLQH++MIEAVENHMPEVII+DEIG E EA
Sbjct: 158 IVDTSNEIAGDGDIPHPAIGRSRRMQVPDPSLQHELMIEAVENHMPEVIIIDEIGREQEA 217
Query: 120 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILER 179
A R+IAERGV LIGTAHG LEN++ NP LSDL+GG+++VTL DEEAR R QKS+LER
Sbjct: 218 IAARTIAERGVQLIGTAHGNSLENLLMNPTLSDLVGGIESVTLSDEEARRRGTQKSVLER 277
Query: 180 KAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDR 238
+APPTF LIE+++R H + H ++VD +LRG+ + E R D++ + V R +T
Sbjct: 278 RAPPTFDVLIEIKDRQHLVIHHDVAQAVDAILRGRELIPEERFVDEQGVIHVRRLETTPE 337
Query: 239 H 239
H
Sbjct: 338 H 338
>gi|217967175|ref|YP_002352681.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dictyoglomus turgidum DSM 6724]
gi|217336274|gb|ACK42067.1| single-stranded nucleic acid binding R3H domain protein
[Dictyoglomus turgidum DSM 6724]
Length = 515
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 129/190 (67%), Positives = 151/190 (79%), Gaps = 1/190 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
+PGVGKTT++RE ARVL+DE KRV+I+DTSNEIGGDGDIPH AIG ARRMQVP PS QH
Sbjct: 136 KPGVGKTTLLRETARVLADELGKRVIIIDTSNEIGGDGDIPHPAIGRARRMQVPNPSKQH 195
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAHG L+N++ NP LSDL
Sbjct: 196 DVMIEAVENHMPEVIVIDEIGTELEAKAARTIAERGVQLIGTAHGITLQNLLLNPTLSDL 255
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLRG 212
+GG+ VTL DEEA+ R QK++LERKAPPTF +IE++ER + H K+VD LLRG
Sbjct: 256 VGGIQVVTLSDEEAKRRGTQKTVLERKAPPTFQVVIEIQERDRLAIHHDVAKTVDALLRG 315
Query: 213 KTPLVEIRKR 222
EIR R
Sbjct: 316 YIIKPEIRVR 325
>gi|159897031|ref|YP_001543278.1| single-stranded nucleic acid binding R3H domain-containing protein
[Herpetosiphon aurantiacus DSM 785]
gi|159890070|gb|ABX03150.1| single-stranded nucleic acid binding R3H domain protein
[Herpetosiphon aurantiacus DSM 785]
Length = 565
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 132/234 (56%), Positives = 164/234 (70%), Gaps = 13/234 (5%)
Query: 7 VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A+Y +I+ D L +PG GKTT++RE+ARVL+D+F KRVVI
Sbjct: 103 VIGLTCRVGRAVYGTIEIVRDLVEAGKSILILGKPGTGKTTMLREVARVLADDFLKRVVI 162
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
VDTSNEI GDGDIPH IG ARRMQV P+ QH VMIEAVENHMP+VI++DEIGTE EA
Sbjct: 163 VDTSNEIAGDGDIPHPGIGRARRMQVARPAEQHNVMIEAVENHMPQVIVIDEIGTELEAQ 222
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+GTAHG LEN++ NP LSDLIGG+ VTLGDEEAR R QK++LERK
Sbjct: 223 AARTIAERGVQLVGTAHGNTLENLMLNPTLSDLIGGIQAVTLGDEEARRRGTQKTVLERK 282
Query: 181 APPTFYFLIEMRERHYW----VTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
APPTF L+E+ W + + +VD +L+G P E R +D++ +VV
Sbjct: 283 APPTFDVLVEI---QSWDDVTIYQEVASAVDSILQGNEPTAEQRTKDEQGEIVV 333
>gi|300115498|ref|YP_003762073.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Nitrosococcus watsonii C-113]
gi|299541435|gb|ADJ29752.1| single-stranded nucleic acid binding R3H domain protein
[Nitrosococcus watsonii C-113]
Length = 496
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 131/188 (69%), Positives = 147/188 (78%), Gaps = 1/188 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +REIARVL+DEF KRVVIVDTSNEIGGDGDIPH AIG+ARRMQV
Sbjct: 124 LLLLGRPGVGKTTRLREIARVLADEFGKRVVIVDTSNEIGGDGDIPHPAIGSARRMQVAH 183
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P QH VMIEAVENHMPEVI+VDEIGT +EA A R+IAERGV LIGTAHG LEN++ NP
Sbjct: 184 PEQQHGVMIEAVENHMPEVIVVDEIGTTSEAMAARTIAERGVQLIGTAHGNTLENLVMNP 243
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVD 207
L+DLIGGV VTLGD+EAR RR QK+I ERKA PTF ++E+ R + H T +VD
Sbjct: 244 TLADLIGGVQVVTLGDDEARLRRTQKTIRERKALPTFNAVVEIVNREIMMVHPDTASAVD 303
Query: 208 MLLRGKTP 215
LLRG P
Sbjct: 304 KLLRGLDP 311
>gi|302835702|ref|XP_002949412.1| hypothetical protein VOLCADRAFT_89849 [Volvox carteri f. nagariensis]
gi|300265239|gb|EFJ49431.1| hypothetical protein VOLCADRAFT_89849 [Volvox carteri f. nagariensis]
Length = 2804
Score = 259 bits (662), Expect = 7e-67, Method: Composition-based stats.
Identities = 123/190 (64%), Positives = 148/190 (77%), Gaps = 1/190 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTT +RE++R+L+DE KRVVIVDTSNEIGGDGDIPHS IG ARRMQV P QH
Sbjct: 2226 RPGVGKTTAIREVSRMLADECSKRVVIVDTSNEIGGDGDIPHSGIGRARRMQVAAPEAQH 2285
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEAVENHMP+VI++DEIGT E A R+IA+RGV L+ TAHG LEN+IKNP L+DL
Sbjct: 2286 RVMIEAVENHMPQVIVIDEIGTAEECAAARTIAQRGVQLVATAHGNQLENVIKNPQLADL 2345
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRG 212
+GG+ +VTLGDEEA+ R QKSILER APPTF IEM ER W H ++VD++L G
Sbjct: 2346 VGGIQSVTLGDEEAKRRGVQKSILERAAPPTFDVCIEMLERTKWRVHLDVGQAVDVVLAG 2405
Query: 213 KTPLVEIRKR 222
++R+R
Sbjct: 2406 GDAGGQVRER 2415
>gi|163847787|ref|YP_001635831.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chloroflexus aurantiacus J-10-fl]
gi|222525655|ref|YP_002570126.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chloroflexus sp. Y-400-fl]
gi|163669076|gb|ABY35442.1| single-stranded nucleic acid binding R3H domain protein
[Chloroflexus aurantiacus J-10-fl]
gi|222449534|gb|ACM53800.1| single-stranded nucleic acid binding R3H domain protein
[Chloroflexus sp. Y-400-fl]
Length = 539
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/233 (58%), Positives = 161/233 (69%), Gaps = 9/233 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A+Y II D L +PG GKTT++RE ARVL DE +KRVVI
Sbjct: 101 VIGLTCRVGRAVYGTVDIIRDLVETGQSILLLGKPGTGKTTLLRETARVLGDELRKRVVI 160
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
VDTSNEI GDGDIPH IG ARRMQVP P+ QH VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 161 VDTSNEIAGDGDIPHPGIGRARRMQVPRPAEQHNVMIEAVENHMPEVIVIDEIGTELEAA 220
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+GTAHG L+N++ NP LSDL+GG+ VTLGDEEAR R QK++LERK
Sbjct: 221 AARTIAERGVQLVGTAHGNTLDNLMVNPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERK 280
Query: 181 APPTFYFLIEMRE-RHYWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
APPTF L+E++ V +VD +LRG+ P E R RD N VV R
Sbjct: 281 APPTFSILVEIQSWDRVMVYPDVAAAVDAILRGEDPPCEQRFRD--ANGVVHR 331
>gi|359486767|ref|XP_002271948.2| PREDICTED: uncharacterized protein ycf45-like [Vitis vinifera]
Length = 687
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 154/195 (78%), Gaps = 1/195 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DE KRVVIVDTSNEIGGDGD+PHS IG ARRMQV ++QH
Sbjct: 222 PGVGKTTLIREIARMLADEHMKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVSNVNMQHN 281
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAHG ++NI+KNP L L+
Sbjct: 282 VMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIDNIMKNPSLQILV 341
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLRGK 213
GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H V H+ + +VD +L GK
Sbjct: 342 GGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTHCRVHHRLDATVDAILAGK 401
Query: 214 TPLVEIRKRDDRFNV 228
+PL E+R D N+
Sbjct: 402 SPLFELRHMDAEANI 416
>gi|374853797|dbj|BAL56696.1| single-stranded nucleic acid binding R3H [uncultured gamma
proteobacterium]
Length = 501
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/186 (66%), Positives = 148/186 (79%), Gaps = 1/186 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +RE+ARVL+D+F KRV+++DTSNEIGGDGD+PH AIG+ARRMQVP
Sbjct: 128 LLLLGRPGVGKTTKLREVARVLADDFGKRVIVIDTSNEIGGDGDVPHPAIGSARRMQVPH 187
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P QH VMIEAVENHMPEVI++DEIGT AEA A R+IAERGV LIGTAHG L N+++NP
Sbjct: 188 PDKQHAVMIEAVENHMPEVIVIDEIGTAAEALAARTIAERGVQLIGTAHGNTLANLVQNP 247
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVD 207
L DL+GGV TVTLGDEEAR R QK++ ERKAPPTF ++E+ R + H T +VD
Sbjct: 248 TLCDLVGGVQTVTLGDEEARFRGTQKTVSERKAPPTFEQVVELVSRDELIVHLDTAAAVD 307
Query: 208 MLLRGK 213
LLRG+
Sbjct: 308 ALLRGE 313
>gi|296085962|emb|CBI31403.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/195 (64%), Positives = 154/195 (78%), Gaps = 1/195 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DE KRVVIVDTSNEIGGDGD+PHS IG ARRMQV ++QH
Sbjct: 97 PGVGKTTLIREIARMLADEHMKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVSNVNMQHN 156
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAHG ++NI+KNP L L+
Sbjct: 157 VMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIDNIMKNPSLQILV 216
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLRGK 213
GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H V H+ + +VD +L GK
Sbjct: 217 GGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTHCRVHHRLDATVDAILAGK 276
Query: 214 TPLVEIRKRDDRFNV 228
+PL E+R D N+
Sbjct: 277 SPLFELRHMDAEANI 291
>gi|87300916|ref|ZP_01083758.1| hypothetical protein WH5701_05690 [Synechococcus sp. WH 5701]
gi|87284787|gb|EAQ76739.1| hypothetical protein WH5701_05690 [Synechococcus sp. WH 5701]
Length = 564
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/222 (57%), Positives = 159/222 (71%), Gaps = 7/222 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A++ ++ D L RPGVGKTT +REIARVL+D+ ++RVV+
Sbjct: 116 VVGLTCRVGRAVFGTVAMVRDLLDSGQSLLLMGRPGVGKTTALREIARVLADDLERRVVV 175
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
+DTSNEI GDGDIPH AIG ARRMQV P QH+VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 176 IDTSNEIAGDGDIPHPAIGRARRMQVARPEQQHQVMIEAVENHMPEVIVIDEIGTELEAQ 235
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGVML+ TAHG L N+IKNP L+DLIGG+ +VTLGDEEAR R QK++LER
Sbjct: 236 AARTIAERGVMLVATAHGNELANLIKNPTLADLIGGIQSVTLGDEEARRRGSQKTVLERC 295
Query: 181 APPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 221
A PTF +EM R W+ H+ ++VD LRG+ ++R+
Sbjct: 296 ADPTFPLAVEMHSRSRWLVHRDVARTVDQQLRGQPVRPQVRE 337
>gi|219849802|ref|YP_002464235.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chloroflexus aggregans DSM 9485]
gi|219544061|gb|ACL25799.1| single-stranded nucleic acid binding R3H domain protein
[Chloroflexus aggregans DSM 9485]
Length = 540
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/224 (59%), Positives = 157/224 (70%), Gaps = 7/224 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A+Y II D L +PG GKTT++RE ARVL DE +KRVVI
Sbjct: 101 VIGLTCRVGRAVYGTVDIIRDLVETGQSILLLGKPGTGKTTLLRETARVLGDELRKRVVI 160
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
VDTSNEI GDGDIPH IG ARRMQVP PS QH VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 161 VDTSNEIAGDGDIPHPGIGRARRMQVPRPSEQHNVMIEAVENHMPEVIVIDEIGTELEAA 220
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV LIGTAHG L+N++ NP LSDL+GG+ VTLGDEEAR R QK++LERK
Sbjct: 221 AARTIAERGVQLIGTAHGNTLDNLMINPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERK 280
Query: 181 APPTFYFLIEMRE-RHYWVTHKTEKSVDMLLRGKTPLVEIRKRD 223
APPTF L+E++ V +VD +LRG+ P E R R+
Sbjct: 281 APPTFSILVEIQSWDSVTVYPDVAAAVDAILRGEEPPCEQRIRE 324
>gi|320159578|ref|YP_004172802.1| hypothetical protein ANT_01680 [Anaerolinea thermophila UNI-1]
gi|319993431|dbj|BAJ62202.1| hypothetical protein ANT_01680 [Anaerolinea thermophila UNI-1]
Length = 538
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 134/230 (58%), Positives = 165/230 (71%), Gaps = 9/230 (3%)
Query: 10 LIVKFFYALYSINKIIFDFFLS------YFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L + A+Y II D S RPG+GKTT++RE AR+L++ +KRVVIVDT
Sbjct: 104 LTCRVGRAVYGTIDIIQDLIESGKSVLILGRPGIGKTTMLREAARILAE--KKRVVIVDT 161
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEIGGDGD+PH A+G ARRMQVP+PSLQH+VMIEAVENH PEVI++DEIG E EA A R
Sbjct: 162 SNEIGGDGDVPHPAVGAARRMQVPKPSLQHEVMIEAVENHNPEVIVIDEIGRELEAAAAR 221
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV LIGTAHG LEN++ NP LSDL+GG++ VTL DEEAR R QK++LER+APP
Sbjct: 222 TIAERGVQLIGTAHGRTLENLLLNPTLSDLVGGIEAVTLSDEEARRRGTQKTVLERRAPP 281
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
TF LIE++ER H +VD L+R EIR RD N+ V++
Sbjct: 282 TFDVLIEIQERDRLAIHPDVAAAVDALVRNNPLPPEIRYRDAEGNIHVEK 331
>gi|189095330|ref|YP_001936343.1| conserved hypothetical plastid protein Ycf45 [Heterosigma akashiwo]
gi|157694673|gb|ABV65949.1| conserved hypothetical plastid protein Ycf45 [Heterosigma akashiwo]
gi|157777904|gb|ABV70090.1| conserved hypothetical plastid protein Ycf45 [Heterosigma akashiwo]
Length = 451
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/189 (65%), Positives = 149/189 (78%), Gaps = 1/189 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
+PGVGKTT +REIAR+LSDE +KRVVIVDTSNEIGG+ DIPHS IG ARRMQV + LQH
Sbjct: 131 KPGVGKTTTIREIARILSDELRKRVVIVDTSNEIGGNSDIPHSGIGRARRMQVSKSELQH 190
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
VM+EAVENHMPEVIIVDEIGT+ E A R+IAERGV +IGT HG LEN+IKNPIL D+
Sbjct: 191 NVMVEAVENHMPEVIIVDEIGTDLEVLAVRTIAERGVQVIGTVHGNNLENLIKNPILMDI 250
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRG 212
+GGV V LGDEEA+ R QK++LERKAPP+F IE+ ++ W H+ +SVD LL+
Sbjct: 251 VGGVQNVILGDEEAKKRGTQKNVLERKAPPSFQIAIEINQKMNWFVHENITQSVDRLLQK 310
Query: 213 KTPLVEIRK 221
+ P ++ RK
Sbjct: 311 QFPYLQSRK 319
>gi|224109840|ref|XP_002315329.1| predicted protein [Populus trichocarpa]
gi|222864369|gb|EEF01500.1| predicted protein [Populus trichocarpa]
Length = 542
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 132/228 (57%), Positives = 165/228 (72%), Gaps = 7/228 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A+ +II D L RPGVGKTT++REIAR+L+D+ +K
Sbjct: 185 RKMQIIGLTCRVGRAVSGSAEIIRDLVEGGSSILVIGRPGVGKTTLIREIARMLADDQRK 244
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVIVDTSNEIGGDGD+PH+ IG ARRMQVP ++QH +MIEAVENHMPE II+DEIGTE
Sbjct: 245 RVVIVDTSNEIGGDGDVPHAGIGRARRMQVPNVNMQHNIMIEAVENHMPETIIIDEIGTE 304
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A +IA+RGV L+GTAHG ++NIIKNP L L+GG+++VTLGDEEAR R+ QK+I
Sbjct: 305 LEALAASTIAQRGVQLVGTAHGMTIDNIIKNPSLQILVGGIESVTLGDEEARKRKVQKTI 364
Query: 177 LERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLRGKTPLVEIRKRD 223
LERK PPTF +EM R V H+ + +VD +L GK+PL EIR D
Sbjct: 365 LERKGPPTFTCAVEMITRTECRVHHRLDATVDAILAGKSPLFEIRHVD 412
>gi|148243212|ref|YP_001228369.1| AAA ATPase [Synechococcus sp. RCC307]
gi|147851522|emb|CAK29016.1| AAA ATPase superfamily protein [Synechococcus sp. RCC307]
Length = 470
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 161/233 (69%), Gaps = 7/233 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A++ ++ D L RPGVGKTT +REIARVL+D+ +RV++
Sbjct: 114 VIGLTCRVGRAVFGTVAMVRDLLDTGESLLLLGRPGVGKTTALREIARVLADDLGRRVMV 173
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
+DTSNEI GDGDIPH AIG ARR+QV P LQH+VMIEAVENHMPEVI++DEIGTE EA
Sbjct: 174 IDTSNEIAGDGDIPHPAIGRARRLQVARPQLQHRVMIEAVENHMPEVIVIDEIGTEQEAQ 233
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+ TAHG L N+++NP LSDL+GGV VTLGD+EAR R QK++LER
Sbjct: 234 AARTIAERGVQLVATAHGNALANLVRNPTLSDLVGGVQAVTLGDDEARRRGSQKAVLERA 293
Query: 181 APPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 232
A PTF +EM R W+ H +VD LLRG++ E+R +VV+R
Sbjct: 294 AEPTFPLAVEMHSRSRWMVHGDVAATVDQLLRGQSSAPEVRSVGPDGVLVVER 346
>gi|159475499|ref|XP_001695856.1| hypothetical protein CHLREDRAFT_118675 [Chlamydomonas reinhardtii]
gi|158275416|gb|EDP01193.1| predicted protein [Chlamydomonas reinhardtii]
Length = 551
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/227 (56%), Positives = 160/227 (70%), Gaps = 7/227 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFFLS------YFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A+ +++ D LS RPGVGKTT +RE++R+L+DE K
Sbjct: 89 RTGRIIGLTCRVGRAIKGSAQMVRDLVLSGASILLLGRPGVGKTTAIREVSRMLADECTK 148
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVIVDTSNEIGGDGDIPHS IG ARRMQV P QH+VMIEAVENHMP+VI++DEIGT
Sbjct: 149 RVVIVDTSNEIGGDGDIPHSGIGRARRMQVAHPEAQHRVMIEAVENHMPQVIVIDEIGTS 208
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
E A R+IA+RGV L+ TAHG LEN+IKNP L+DL+GG+ +VTLGDEEA+ R QKSI
Sbjct: 209 EECGAARTIAQRGVQLVATAHGNELENVIKNPQLADLVGGIQSVTLGDEEAKRRGVQKSI 268
Query: 177 LERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKR 222
LER APPTF IEM ER W H ++VDM+L G ++R++
Sbjct: 269 LERAAPPTFDVCIEMLERTKWRAHLDVGQAVDMVLAGGESGGQVREK 315
>gi|222636577|gb|EEE66709.1| hypothetical protein OsJ_23378 [Oryza sativa Japonica Group]
Length = 605
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 125/190 (65%), Positives = 153/190 (80%), Gaps = 1/190 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS IG +RRMQVP+ S+QH
Sbjct: 115 PGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRSRRMQVPKVSMQHN 174
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +E+IIKNP L L+
Sbjct: 175 VMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVTIESIIKNPCLQVLV 234
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKTEKSVDMLLRGK 213
GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + V HK E +VD +L GK
Sbjct: 235 GGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTECRVHHKLEATVDAILAGK 294
Query: 214 TPLVEIRKRD 223
P E RK D
Sbjct: 295 PPKFEARKMD 304
>gi|358346746|ref|XP_003637426.1| ATPase-like protein, partial [Medicago truncatula]
gi|355503361|gb|AES84564.1| ATPase-like protein, partial [Medicago truncatula]
Length = 493
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 133/235 (56%), Positives = 166/235 (70%), Gaps = 7/235 (2%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A+ KII D L PGVGKTT++RE AR+L+DEF K
Sbjct: 173 RQMQIIGLTCRVGRAVSGSAKIIHDLVEGGGSILVIGPPGVGKTTLIRETARMLADEFLK 232
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVIVDTSNEIGGDGD+PH+ IG ARRMQVP ++QH +MIEAVENHMPE II+DEIGTE
Sbjct: 233 RVVIVDTSNEIGGDGDVPHAGIGRARRMQVPNVNMQHSIMIEAVENHMPETIIIDEIGTE 292
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A +IA+RGV L+GTAHG +E+I+KNP L L+GG+++VTLGDEEAR R+ QK+I
Sbjct: 293 LEALAASTIAQRGVQLVGTAHGTTIESIMKNPYLQILVGGIESVTLGDEEARKRKVQKTI 352
Query: 177 LERKAPPTFYFLIEM-RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 230
LERK PPTF +EM + V H+ + +VD LL GK P+ E+R DD N +V
Sbjct: 353 LERKGPPTFTCAVEMISKTECRVHHRLDATVDALLAGKPPVFEVRHWDDFSNDLV 407
>gi|255585357|ref|XP_002533375.1| ATP binding protein, putative [Ricinus communis]
gi|223526782|gb|EEF29006.1| ATP binding protein, putative [Ricinus communis]
Length = 693
Score = 256 bits (654), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 132/228 (57%), Positives = 164/228 (71%), Gaps = 7/228 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R + L + A+ +II D L+ PGVGKTT++REIAR+L+D+ K
Sbjct: 186 RKMQIIGLTCRVGRAVSGSAEIIRDLVEGGGSILAIGPPGVGKTTLIREIARMLADDQGK 245
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVIVDTSNEIGGDGD+PH+ IG ARRMQVP ++QH VMIEAVENHMP+ II+DEIGTE
Sbjct: 246 RVVIVDTSNEIGGDGDVPHAGIGRARRMQVPNVNMQHNVMIEAVENHMPQAIIIDEIGTE 305
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A +IA+RGV L+GTAHG ++NIIKNP L L+GG+++VTLGDEEAR R+ QK+I
Sbjct: 306 LEALAASTIAQRGVQLVGTAHGMTIDNIIKNPSLQILVGGIESVTLGDEEARKRKVQKTI 365
Query: 177 LERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLRGKTPLVEIRKRD 223
LERK PPTF +EM R V H+ + +VD +L GKTPL EIR D
Sbjct: 366 LERKGPPTFTCAVEMISRTECRVHHRLDATVDTILSGKTPLFEIRHMD 413
>gi|118411121|ref|YP_874515.1| hypothetical protein ThpsCp026 [Thalassiosira pseudonana]
gi|224015786|ref|XP_002297541.1| hypothetical protein THAPSDRAFT_bd2063 [Thalassiosira pseudonana
CCMP1335]
gi|116739868|gb|ABK20738.1| conserved hypothetical protein [Thalassiosira pseudonana]
gi|220967805|gb|EED86181.1| hypothetical protein THAPSDRAFT_bd2063 [Thalassiosira pseudonana
CCMP1335]
Length = 454
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 156/206 (75%), Gaps = 2/206 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTT++REIARVLSDE +KRV+I+DTSNEI GD D+PHS IG ARRMQVP+ LQH
Sbjct: 131 RPGVGKTTIIREIARVLSDEMEKRVIIIDTSNEIAGDSDVPHSGIGRARRMQVPKTELQH 190
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
K+M+EA+ENHMP+VI++DEIGTE EA A R+IAE+GV L+GT HG LEN+IKNP LSDL
Sbjct: 191 KIMLEAIENHMPQVIVIDEIGTELEALAARTIAEKGVQLVGTTHGNCLENLIKNPSLSDL 250
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRG 212
IGG+ VT+ DEEA+ R QKSILERK+ P F IE+ W ++ E SVD++LRG
Sbjct: 251 IGGIQYVTISDEEAKRRGTQKSILERKSYPAFQLAIEVNSLSSWTIYENVENSVDLILRG 310
Query: 213 KTPLVEIRKRDDRFNVVVDRWKTYDR 238
+ +IR ++++ +K + +
Sbjct: 311 NFHIAQIRNLKKNEKLIIN-YKKFQK 335
>gi|218199218|gb|EEC81645.1| hypothetical protein OsI_25180 [Oryza sativa Indica Group]
Length = 682
Score = 255 bits (652), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 125/190 (65%), Positives = 153/190 (80%), Gaps = 1/190 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS IG +RRMQVP+ S+QH
Sbjct: 192 PGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRSRRMQVPKVSMQHN 251
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +E+IIKNP L L+
Sbjct: 252 VMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVTIESIIKNPCLQVLV 311
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKTEKSVDMLLRGK 213
GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + V HK E +VD +L GK
Sbjct: 312 GGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTECRVHHKLEATVDAILAGK 371
Query: 214 TPLVEIRKRD 223
P E RK D
Sbjct: 372 PPKFEARKMD 381
>gi|242047690|ref|XP_002461591.1| hypothetical protein SORBIDRAFT_02g005070 [Sorghum bicolor]
gi|241924968|gb|EER98112.1| hypothetical protein SORBIDRAFT_02g005070 [Sorghum bicolor]
Length = 628
Score = 254 bits (650), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 123/188 (65%), Positives = 152/188 (80%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS IG ARRMQVP+ ++QH
Sbjct: 138 PGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRARRMQVPKVTMQHN 197
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +E+IIKNP L L+
Sbjct: 198 VMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVTIESIIKNPCLQMLV 257
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKTEKSVDMLLRGK 213
GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + V HK + +VD +L GK
Sbjct: 258 GGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTECRVHHKLDATVDAILAGK 317
Query: 214 TPLVEIRK 221
P E RK
Sbjct: 318 PPKFEARK 325
>gi|308081617|ref|NP_001183219.1| uncharacterized protein LOC100501605 [Zea mays]
gi|238010124|gb|ACR36097.1| unknown [Zea mays]
Length = 587
Score = 254 bits (648), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 164/226 (72%), Gaps = 7/226 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFFLSYFR------PGVGKTTVMREIARVLSDEFQK 56
R + L + A+ ++I D +S PGVGKTT++REIAR+L+DE +K
Sbjct: 59 RKAQIIGLTCRVGRAISGSAEMIRDLVVSGGSILVIGPPGVGKTTLIREIARILADEGKK 118
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RV+IVDTSNEIGGDGD+PHS IG ARRMQVP+ ++QH VMIEAVENHMPEVI++DEIGTE
Sbjct: 119 RVIIVDTSNEIGGDGDVPHSGIGRARRMQVPKVTMQHNVMIEAVENHMPEVIVIDEIGTE 178
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A +IA+RGV L+GTAHG +E+IIKNP L L+GG+++VTLGDEEA+ R+ QK+I
Sbjct: 179 LEAMAATTIAQRGVQLVGTAHGVTIESIIKNPCLQMLVGGIESVTLGDEEAKKRKVQKTI 238
Query: 177 LERKAPPTFYFLIEM-RERHYWVTHKTEKSVDMLLRGKTPLVEIRK 221
LERK PPTF +EM + V H+ + +VD +L GK P E RK
Sbjct: 239 LERKGPPTFLCAVEMISKTECRVHHRLDATVDAILAGKPPKFEARK 284
>gi|414591924|tpg|DAA42495.1| TPA: hypothetical protein ZEAMMB73_459348 [Zea mays]
Length = 696
Score = 253 bits (647), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 128/226 (56%), Positives = 164/226 (72%), Gaps = 7/226 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFFLSYFR------PGVGKTTVMREIARVLSDEFQK 56
R + L + A+ ++I D +S PGVGKTT++REIAR+L+DE +K
Sbjct: 168 RKAQIIGLTCRVGRAISGSAEMIRDLVVSGGSILVIGPPGVGKTTLIREIARILADEGKK 227
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RV+IVDTSNEIGGDGD+PHS IG ARRMQVP+ ++QH VMIEAVENHMPEVI++DEIGTE
Sbjct: 228 RVIIVDTSNEIGGDGDVPHSGIGRARRMQVPKVTMQHNVMIEAVENHMPEVIVIDEIGTE 287
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A +IA+RGV L+GTAHG +E+IIKNP L L+GG+++VTLGDEEA+ R+ QK+I
Sbjct: 288 LEAMAATTIAQRGVQLVGTAHGVTIESIIKNPCLQMLVGGIESVTLGDEEAKKRKVQKTI 347
Query: 177 LERKAPPTFYFLIEM-RERHYWVTHKTEKSVDMLLRGKTPLVEIRK 221
LERK PPTF +EM + V H+ + +VD +L GK P E RK
Sbjct: 348 LERKGPPTFLCAVEMISKTECRVHHRLDATVDAILAGKPPKFEARK 393
>gi|357111296|ref|XP_003557450.1| PREDICTED: uncharacterized protein ycf45-like [Brachypodium
distachyon]
Length = 707
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/192 (64%), Positives = 153/192 (79%), Gaps = 1/192 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS IG +RRMQVP+ ++QH
Sbjct: 215 PGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRSRRMQVPKVTMQHN 274
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +E+IIKNP L L+
Sbjct: 275 VMIEAVENHMPEVIVIDEIGTELEALAASTIAQRGVQLVGTAHGVTIESIIKNPCLQMLV 334
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLRGK 213
GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + V HK E +VD +L GK
Sbjct: 335 GGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMVSKTECRVHHKLETTVDAILAGK 394
Query: 214 TPLVEIRKRDDR 225
P E R D +
Sbjct: 395 PPKFEARVMDSK 406
>gi|116748317|ref|YP_845004.1| single-stranded nucleic acid binding R3H domain-containing protein
[Syntrophobacter fumaroxidans MPOB]
gi|116697381|gb|ABK16569.1| single-stranded nucleic acid binding R3H domain protein
[Syntrophobacter fumaroxidans MPOB]
Length = 515
Score = 253 bits (646), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 136/235 (57%), Positives = 162/235 (68%), Gaps = 9/235 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R +V L + A++ I+ D L RPGVGKTT++RE ARVL+D+F K
Sbjct: 99 RSGSVIGLTCRVGRAVFGTVDIVRDVVESGHSLLLLGRPGVGKTTLLREAARVLADDFGK 158
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RV+IVDTSNEIGGDGDIPH IG ARRMQVP P QH VMIEAVENHMPEVI++DEIGTE
Sbjct: 159 RVIIVDTSNEIGGDGDIPHPGIGRARRMQVPTPGNQHGVMIEAVENHMPEVIVIDEIGTE 218
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
AEA A R+IAERGV LI T HG LEN+++NP LSDL+GG+ +VTL DEEAR R QK++
Sbjct: 219 AEALAARTIAERGVQLIATVHGNTLENLLQNPSLSDLVGGLQSVTLSDEEARRRGTQKTV 278
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKTEKSV-DMLLRG--KTPLVEIRKRDDRFNV 228
LERK PPTF +IE++E+ H SV D LRG +P V IR D V
Sbjct: 279 LERKLPPTFNVVIEIQEKDRLAVHHDVASVIDYSLRGFPFSPEVRIRTGDGSVEV 333
>gi|11467491|ref|NP_043637.1| ORF455 [Odontella sinensis]
gi|1351772|sp|P49540.1|YCF45_ODOSI RecName: Full=Uncharacterized protein ycf45; AltName: Full=ORF455
gi|1185186|emb|CAA91669.1| ORF455, homologous to Porphyra ORF565 [Odontella sinensis]
Length = 455
Score = 252 bits (644), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 122/189 (64%), Positives = 148/189 (78%), Gaps = 1/189 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
+PGVGKTT++REIARVLSDE +KRVVIVDTSNEI GD DIPHSAIG ARRMQV LQH
Sbjct: 131 KPGVGKTTIIREIARVLSDEMEKRVVIVDTSNEIAGDSDIPHSAIGRARRMQVATTDLQH 190
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
++MIEAVENHMP+VI++DEIGTE EA A R+IAE+GV L+GT HG LEN+IKNP LSDL
Sbjct: 191 QIMIEAVENHMPQVIVIDEIGTELEALAARTIAEKGVQLVGTTHGNCLENLIKNPPLSDL 250
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEK-SVDMLLRG 212
IGG+ +VTL D+EA+ R QKSI+ERKA P F IE+ + W H+ K S+D+LLR
Sbjct: 251 IGGIQSVTLSDDEAKRRGTQKSIIERKAYPAFQIAIEINTENSWTIHEDIKSSIDLLLRK 310
Query: 213 KTPLVEIRK 221
++R+
Sbjct: 311 SFTGTQVRE 319
>gi|449465306|ref|XP_004150369.1| PREDICTED: uncharacterized protein ycf45-like [Cucumis sativus]
gi|449513026|ref|XP_004164207.1| PREDICTED: uncharacterized protein ycf45-like [Cucumis sativus]
Length = 733
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 123/194 (63%), Positives = 153/194 (78%), Gaps = 1/194 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+D+ +KRVVIVDTSNEIGGDGD+PH+ IG+ARRMQVP ++QH
Sbjct: 236 PGVGKTTLIREIARMLADDHKKRVVIVDTSNEIGGDGDVPHAGIGSARRMQVPNVNMQHT 295
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAHG ++NIIKNP L L+
Sbjct: 296 VMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGITIDNIIKNPSLQILV 355
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKTEKSVDMLLRGK 213
GG+++VTLGDEEAR R+ QK+ILERK P TF +EM + V H+ + +VD +L GK
Sbjct: 356 GGIESVTLGDEEARKRKVQKTILERKGPSTFTCAVEMISKTECRVHHRLDTTVDAILAGK 415
Query: 214 TPLVEIRKRDDRFN 227
PL E+R D N
Sbjct: 416 PPLFEVRHVDTYAN 429
>gi|374851690|dbj|BAL54642.1| single-stranded nucleic acid binding R3H [uncultured Chloroflexi
bacterium]
Length = 517
Score = 252 bits (643), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 132/228 (57%), Positives = 163/228 (71%), Gaps = 11/228 (4%)
Query: 10 LIVKFFYALYSINKIIFDFFLS------YFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L ++ A+Y + II D S RPGVGKTT++RE AR+L++ +RV+IVDT
Sbjct: 104 LTLRVGRAVYGTSDIIEDIITSGKSILLLGRPGVGKTTLLREAARILAE--TRRVIIVDT 161
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEIGGDGD+PH AIG ARRMQV EP LQH+VMIEAVENH PEVI++DEIG E EA A R
Sbjct: 162 SNEIGGDGDVPHPAIGKARRMQVREPMLQHEVMIEAVENHNPEVIVIDEIGRELEAAAAR 221
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV LIGTAHG LEN++ NP LSDL+GG++ VTL DEEAR R QK++LER+APP
Sbjct: 222 TIAERGVQLIGTAHGNTLENLLLNPTLSDLVGGIEAVTLSDEEARRRGTQKTVLERRAPP 281
Query: 184 TFYFLIEMRERHYWVTH-KTEKSVDMLLRGK--TPLVEIRKRDDRFNV 228
TF LIE++ R H +VD LLRG+ P + IR+ D R +
Sbjct: 282 TFDVLIEIQNRDRLAIHMDVATAVDALLRGRPIPPEIRIREPDGRIRI 329
>gi|452821468|gb|EME28498.1| [pt] hypothetical protein [Galdieria sulphuraria]
Length = 493
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 127/213 (59%), Positives = 160/213 (75%), Gaps = 10/213 (4%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
+PGVGKTT +REIAR+L+DE KRV+I+DTSNEI GD DI H +IG ARRMQV P LQH
Sbjct: 96 KPGVGKTTAIREIARILADEIGKRVIIIDTSNEIAGDSDIGHFSIGRARRMQVKHPQLQH 155
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEA+ENHMPEVII+DEI TE EA A R+IAERGV LIGTAHG LEN+I+N LSDL
Sbjct: 156 QVMIEAIENHMPEVIIIDEISTELEAIAARTIAERGVQLIGTAHGNSLENLIRNFTLSDL 215
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 212
IGG+ VTLGDEEAR R QKSILERK+ PTF +IE+ + + W H+ E++VD +L+G
Sbjct: 216 IGGIQYVTLGDEEARKRGTQKSILERKSFPTFNIVIEIHQLYSWRIHQDVEQNVDRILQG 275
Query: 213 KTPLVEIRKRDDRF----NVVVDRWKTYDRHDI 241
P+++ DRF N + ++ Y+ ++I
Sbjct: 276 SRPILQ-----DRFISLDNKHIIKYSQYNNNEI 303
>gi|145341893|ref|XP_001416037.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576260|gb|ABO94329.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 552
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/195 (62%), Positives = 147/195 (75%), Gaps = 1/195 (0%)
Query: 27 DFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 86
+ L RPGVGKTT +REI+R+LSDE +RVVIVDTSNEIGGDGD+PH IG ARRMQV
Sbjct: 122 NSILLLGRPGVGKTTAIREISRILSDEHSRRVVIVDTSNEIGGDGDVPHRGIGGARRMQV 181
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
P S QH V+IEAVENH P+ ++VDEIGT+ EA A ++I+ERGV +IGTAHG LEN++K
Sbjct: 182 PNASEQHLVLIEAVENHTPQTVVVDEIGTQQEADAAQTISERGVQMIGTAHGHTLENVLK 241
Query: 147 NPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKS 205
NP L DLIGGV +VTLGD+EAR R QKS+LER PPTF +EM + W H S
Sbjct: 242 NPALCDLIGGVVSVTLGDDEARRRGVQKSVLERAGPPTFTIAVEMLDIGTWRVHTDVAAS 301
Query: 206 VDMLLRGKTPLVEIR 220
VD LL G++P+ E+R
Sbjct: 302 VDALLAGQSPMTELR 316
>gi|332295596|ref|YP_004437519.1| single-stranded nucleic acid binding R3H domain-containing protein
[Thermodesulfobium narugense DSM 14796]
gi|332178699|gb|AEE14388.1| single-stranded nucleic acid binding R3H domain-containing protein
[Thermodesulfobium narugense DSM 14796]
Length = 520
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 153/207 (73%), Gaps = 1/207 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PG+GKTT +REIARVLS + ++RV+++DTSNEIGGDGDIPH AIG +RRMQVP P QH
Sbjct: 135 PGIGKTTKLREIARVLSVDMKRRVIVIDTSNEIGGDGDIPHPAIGKSRRMQVPTPEKQHA 194
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMP+VIIVDEIGTE EA A R+IAERGV LI TAHG L N+I NP LSDL+
Sbjct: 195 VMIEAVENHMPQVIIVDEIGTELEAQAARTIAERGVQLIATAHGNSLVNLIMNPTLSDLV 254
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GGV VTL DEEA+ RR QK+I ERK PTF +IE+ +R V HK +K VD LL+G+
Sbjct: 255 GGVQVVTLSDEEAKRRRTQKTIQERKTQPTFNVVIELLDREKMVIHKNVDKVVDQLLKGE 314
Query: 214 TPLVEIRKRDDRFNVVVDRWKTYDRHD 240
E+R + ++++ + + D
Sbjct: 315 QIRPEVRSKSSDGKIIIEEHRMELKED 341
>gi|206896224|ref|YP_002246822.1| R3H domain-containing protein [Coprothermobacter proteolyticus DSM
5265]
gi|206738841|gb|ACI17919.1| R3H domain protein [Coprothermobacter proteolyticus DSM 5265]
Length = 515
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 133/224 (59%), Positives = 161/224 (71%), Gaps = 10/224 (4%)
Query: 10 LIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
L ++ A+Y + + +F L +PGVGKTT++RE+AR+LS ++QKRV++VDT
Sbjct: 104 LSIRIGRAIYGVVDPLTPYFTQEKSVLLMGKPGVGKTTLLREVARLLSVDYQKRVIVVDT 163
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEI GDGD+PH AIG ARRMQVP P QH VMIEAVENHMPEVIIVDEIG + E A R
Sbjct: 164 SNEIAGDGDVPHPAIGLARRMQVPVPEQQHDVMIEAVENHMPEVIIVDEIGRKEEVDAAR 223
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
+IAERGV LI TAHG LENI+ NP LSDL+GGV VTL DEEA R QK+ILERK P
Sbjct: 224 TIAERGVQLIATAHGNTLENILVNPTLSDLVGGVQVVTLSDEEAHRRGTQKTILERKTSP 283
Query: 184 TFYFLIEMRERHYWVTHK-TEKSVDMLLRG--KTPLVEIRKRDD 224
TF LIE+R R + H+ E++VD LLRG PLV +R +DD
Sbjct: 284 TFDILIEIRARGVYAIHEDVERAVDSLLRGIPPNPLV-LRVKDD 326
>gi|297829570|ref|XP_002882667.1| hypothetical protein ARALYDRAFT_897221 [Arabidopsis lyrata subsp.
lyrata]
gi|297328507|gb|EFH58926.1| hypothetical protein ARALYDRAFT_897221 [Arabidopsis lyrata subsp.
lyrata]
Length = 688
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/188 (66%), Positives = 150/188 (79%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DE +KRVVIVDTSNEIGGDGD+PHS IG ARRMQVP +LQH
Sbjct: 226 PGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNLQHD 285
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+ TAHG ++NIIKNP L LI
Sbjct: 286 VMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKNPSLQILI 345
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGK 213
GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H + + +VD +L GK
Sbjct: 346 GGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTVDAILAGK 405
Query: 214 TPLVEIRK 221
+ L EIR+
Sbjct: 406 SALFEIRQ 413
>gi|255090003|ref|XP_002506923.1| predicted protein [Micromonas sp. RCC299]
gi|226522196|gb|ACO68181.1| predicted protein [Micromonas sp. RCC299]
Length = 624
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 126/228 (55%), Positives = 160/228 (70%), Gaps = 7/228 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFFLS------YFRPGVGKTTVMREIARVLSDEFQK 56
R V L + A+ ++ D S RPGVGKTT +REI+R+LS+E+ +
Sbjct: 119 RKGGVVGLTARVGRAIEGSADLVRDLLASGASVLLLGRPGVGKTTAIREISRILSEEYGR 178
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVV+VDTSNEIGGDGDIPH IG +RRMQVP P QH V+IEAV+NH P+V+IVDEIGTE
Sbjct: 179 RVVVVDTSNEIGGDGDIPHPGIGGSRRMQVPVPDRQHDVLIEAVQNHTPQVVIVDEIGTE 238
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
EA A R+I++RGV +I TAHG LEN++KNP+L+DL+GGV +VTLGD+EAR RR QKS+
Sbjct: 239 LEAKAARTISQRGVQMIATAHGHTLENLLKNPLLNDLVGGVVSVTLGDDEARRRRVQKSV 298
Query: 177 LERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRD 223
LER+ PPTF +EM + +W H +VD LL G P VE+R D
Sbjct: 299 LEREGPPTFGAAVEMVDIGHWRVHLDVGVAVDTLLAGYAPHVELRTLD 346
>gi|302848609|ref|XP_002955836.1| hypothetical protein VOLCADRAFT_66371 [Volvox carteri f.
nagariensis]
gi|300258804|gb|EFJ43037.1| hypothetical protein VOLCADRAFT_66371 [Volvox carteri f.
nagariensis]
Length = 363
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 122/217 (56%), Positives = 154/217 (70%), Gaps = 7/217 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFFLS------YFRPGVGKTTVMREIARVLSDEFQK 56
R V L + A+ +++ D L+ RPGVGKTT +RE+ R+ +DE ++
Sbjct: 135 RAGRVVGLTCRVGRAVPGAAELVRDLVLAGRSILLLGRPGVGKTTALREVCRIAADESRR 194
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVV+VDTSNEIGGDGD+PH +IG+ARRMQVP P QH VM+EAVENHMP+VI++DEI T
Sbjct: 195 RVVVVDTSNEIGGDGDVPHPSIGSARRMQVPRPEAQHDVMVEAVENHMPQVIVIDEISTL 254
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
AE A R+IA+RGV L+GTAHG LEN+IKNP L+DL+GG+ +VTLGDEEAR R QKSI
Sbjct: 255 AECTAARTIAQRGVQLVGTAHGGRLENVIKNPSLADLVGGIQSVTLGDEEARRRGVQKSI 314
Query: 177 LERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRG 212
LER APPTF +E+ ER W H +VD +L G
Sbjct: 315 LERAAPPTFDVAVELEERGRWRVHLDVGGAVDAILAG 351
>gi|118411037|ref|YP_874432.1| hypothetical protein PhtrCp075 [Phaeodactylum tricornutum]
gi|116739784|gb|ABK20655.1| conserved hypothetical protein [Phaeodactylum tricornutum]
Length = 454
Score = 249 bits (637), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/189 (63%), Positives = 148/189 (78%), Gaps = 1/189 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
+PGVGKTT++REIARVL+DE +KRV+I+DTSNEI GD DIPHS IG ARRMQV + LQH
Sbjct: 131 KPGVGKTTIIREIARVLADEMEKRVIIIDTSNEIAGDSDIPHSGIGRARRMQVAKTELQH 190
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEAVENHMP+VII+DEIGTE E A R+IAE+GV L+GT HG L+N+IKNP L+DL
Sbjct: 191 QVMIEAVENHMPQVIIIDEIGTELEVLAARTIAEKGVQLVGTTHGNCLDNLIKNPSLADL 250
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEK-SVDMLLRG 212
IGG+ VTL D+EA+ R QKSILERKA P F +IE+ + W H+ K SVD+ LRG
Sbjct: 251 IGGIQYVTLSDDEAKRRGTQKSILERKAYPAFEIIIEINNQSSWTIHEDVKTSVDLFLRG 310
Query: 213 KTPLVEIRK 221
+ +IR+
Sbjct: 311 SFFVGQIRQ 319
>gi|378824540|ref|YP_005089710.1| ycf45 gene product (chloroplast) [Synedra acus]
gi|371572739|gb|AEX37835.1| hypothetical protein (chloroplast) [Synedra acus]
Length = 448
Score = 249 bits (635), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 117/188 (62%), Positives = 151/188 (80%), Gaps = 1/188 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
+PGVGKTT++REI RVL+DE +KRVV++DTSNEI G+ DIPHS IG ARRMQV + LQH
Sbjct: 129 KPGVGKTTIIREIGRVLADEMEKRVVVIDTSNEIAGESDIPHSGIGRARRMQVAKTELQH 188
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEAVENHMP+VII+DEIGTE E A R+IAE+GV L+GT HG L+N+IKNP L+DL
Sbjct: 189 QVMIEAVENHMPQVIIIDEIGTELEVLAARTIAEKGVQLVGTTHGNCLQNLIKNPPLADL 248
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEK-SVDMLLRG 212
IGG+ VTL D+EA+ R+ QK++LERKA P F LIE+ +++ W H+ K S+D+LLRG
Sbjct: 249 IGGIQYVTLSDDEAKRRKTQKTVLERKAYPAFEILIEINQQNSWTIHEDVKTSIDLLLRG 308
Query: 213 KTPLVEIR 220
+ + +IR
Sbjct: 309 DSFMEQIR 316
>gi|330850845|ref|YP_004376595.1| hypothetical protein FispC_p030 [Fistulifera sp. JPCC DA0580]
gi|328835665|dbj|BAK18961.1| conserved hypothetical protein [Fistulifera sp. JPCC DA0580]
Length = 456
Score = 249 bits (635), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 123/199 (61%), Positives = 151/199 (75%), Gaps = 1/199 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
+PGVGKTT++REIARVL DE +KRV+I+DTSNEI GD DIPHS IG ARRMQV + LQH
Sbjct: 131 KPGVGKTTIIREIARVLGDEMEKRVIIIDTSNEIAGDSDIPHSGIGRARRMQVAKTELQH 190
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEAVENHMP+VII+DEIGTE E A R+IAE+GV L+GT HG LEN+IKNP L+DL
Sbjct: 191 QVMIEAVENHMPQVIIIDEIGTELEVLAARTIAEKGVQLVGTTHGNCLENLIKNPPLADL 250
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEK-SVDMLLRG 212
IGG+ VTL DEEA+ R QKSILERKA P F +IE+ ++ W H+ K SVD LRG
Sbjct: 251 IGGIQYVTLSDEEAKRRGTQKSILERKAYPAFEIIIEINDQTSWTIHEDVKDSVDSFLRG 310
Query: 213 KTPLVEIRKRDDRFNVVVD 231
+ +IR+ V+++
Sbjct: 311 SFLVGQIRQLSLNEKVIIN 329
>gi|15810179|gb|AAL06991.1| AT3g10420/F13M14_30 [Arabidopsis thaliana]
gi|28416489|gb|AAO42775.1| At3g10420/F13M14_30 [Arabidopsis thaliana]
Length = 559
Score = 249 bits (635), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 124/188 (65%), Positives = 149/188 (79%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DE +KRVVIVDTSNEIGGDGD+PHS IG ARRMQVP +LQH
Sbjct: 97 PGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNLQHD 156
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+ TAHG ++NIIKNP L LI
Sbjct: 157 VMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKNPSLQILI 216
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGK 213
GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H + + +VD +L GK
Sbjct: 217 GGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTVDAILAGK 276
Query: 214 TPLVEIRK 221
+ EIR+
Sbjct: 277 SAPFEIRQ 284
>gi|30681308|ref|NP_566373.2| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
gi|332641382|gb|AEE74903.1| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
Length = 684
Score = 249 bits (635), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 124/188 (65%), Positives = 149/188 (79%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DE +KRVVIVDTSNEIGGDGD+PHS IG ARRMQVP +LQH
Sbjct: 222 PGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNLQHD 281
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+ TAHG ++NIIKNP L LI
Sbjct: 282 VMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKNPSLQILI 341
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGK 213
GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H + + +VD +L GK
Sbjct: 342 GGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTVDAILAGK 401
Query: 214 TPLVEIRK 221
+ EIR+
Sbjct: 402 SAPFEIRQ 409
>gi|33146924|dbj|BAC79945.1| ATPase-like protein [Oryza sativa Japonica Group]
gi|50509453|dbj|BAD31071.1| ATPase-like protein [Oryza sativa Japonica Group]
Length = 707
Score = 249 bits (635), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 153/198 (77%), Gaps = 9/198 (4%)
Query: 35 PGVGKTTVM--------REIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 86
PGVGKTT++ REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS IG +RRMQV
Sbjct: 209 PGVGKTTLISLRCFQQYREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRSRRMQV 268
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
P+ S+QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +E+IIK
Sbjct: 269 PKVSMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVTIESIIK 328
Query: 147 NPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKTEKS 205
NP L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + V HK E +
Sbjct: 329 NPCLQVLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTECRVHHKLEAT 388
Query: 206 VDMLLRGKTPLVEIRKRD 223
VD +L GK P E RK D
Sbjct: 389 VDAILAGKPPKFEARKMD 406
>gi|412992135|emb|CCO19848.1| predicted protein [Bathycoccus prasinos]
Length = 773
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 152/206 (73%), Gaps = 2/206 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT +RE++R+LS +F +RVVIVDTSNEIGGDGD+ H +G +RRMQV +P LQH
Sbjct: 308 PGVGKTTAIREMSRLLSADFNQRVVIVDTSNEIGGDGDVAHPGVGNSRRMQVADPKLQHA 367
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENH P+V+IVDEIGTE EA A R+I+ERGV +I TAHG LEN++KNP L DL+
Sbjct: 368 VLIEAVENHTPQVVIVDEIGTEEEAMAARTISERGVKMIATAHGHTLENVLKNPSLCDLV 427
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGK 213
GGV +VTLGD+EAR RR QK+ILER+ PPTF +EM + W H SVD LL G+
Sbjct: 428 GGVQSVTLGDDEARRRRGQKTILEREGPPTFSIAVEMLDIGLWRVHTDVASSVDALLAGQ 487
Query: 214 TPLVEIRK-RDDRFNVVVDRWKTYDR 238
P E+R R+D V V ++ R
Sbjct: 488 APFTELRALREDGIVVQVPEFRENSR 513
>gi|326513988|dbj|BAJ92144.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523339|dbj|BAJ88710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 704
Score = 248 bits (634), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/187 (64%), Positives = 149/187 (79%), Gaps = 1/187 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DE KRV+IVDTSNEIGGDGD+PHS IG +RRMQVP+ ++QH
Sbjct: 213 PGVGKTTLIREIARILADEGNKRVIIVDTSNEIGGDGDVPHSGIGRSRRMQVPKVTMQHN 272
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +++IIKNP L L+
Sbjct: 273 VMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVTIDSIIKNPCLQMLV 332
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGK 213
GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + H K E +VD +L GK
Sbjct: 333 GGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMVSKTECRVHYKLESTVDAILAGK 392
Query: 214 TPLVEIR 220
P E R
Sbjct: 393 PPKFEAR 399
>gi|30681303|ref|NP_850553.1| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
gi|12322790|gb|AAG51387.1|AC011560_19 unknown protein; 108050-105786 [Arabidopsis thaliana]
gi|332641383|gb|AEE74904.1| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
Length = 547
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/188 (65%), Positives = 149/188 (79%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DE +KRVVIVDTSNEIGGDGD+PHS IG ARRMQVP +LQH
Sbjct: 222 PGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNLQHD 281
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+ TAHG ++NIIKNP L LI
Sbjct: 282 VMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKNPSLQILI 341
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGK 213
GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H + + +VD +L GK
Sbjct: 342 GGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTVDAILAGK 401
Query: 214 TPLVEIRK 221
+ EIR+
Sbjct: 402 SAPFEIRQ 409
>gi|315320527|ref|YP_004072583.1| putative Ycf45 [Thalassiosira oceanica CCMP1005]
gi|283569000|gb|ADB27537.1| putative Ycf45 [Thalassiosira oceanica CCMP1005]
Length = 452
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 114/204 (55%), Positives = 156/204 (76%), Gaps = 3/204 (1%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
+PGVGKTT++REIAR+LSDE +KRV+I+DTSNEI GD D+PH+ IG ARRMQV + LQH
Sbjct: 131 KPGVGKTTIIREIARILSDEMEKRVIIIDTSNEIAGDSDVPHNGIGRARRMQVAKTELQH 190
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
K+M+EA+ENHMP+VI++DEIGTE EA A R+IAE+GV L+GT HG LEN+IKNP LSDL
Sbjct: 191 KIMLEAIENHMPQVIVIDEIGTELEALAARTIAEKGVQLVGTTHGNCLENLIKNPSLSDL 250
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRG 212
+GG+ VT+ DEEA+ R QKSILERK+ P F +E+ + W H+ E SVD++LR
Sbjct: 251 VGGIQYVTISDEEAKRRGTQKSILERKSYPAFQLAVEVNNVYSWTIHENVENSVDLILRD 310
Query: 213 KTPLVEIR--KRDDRFNVVVDRWK 234
+++ R K++++ ++ + +
Sbjct: 311 NFTILQTRSIKKNEKLSITYKKLQ 334
>gi|302807180|ref|XP_002985303.1| hypothetical protein SELMODRAFT_181570 [Selaginella moellendorffii]
gi|300147131|gb|EFJ13797.1| hypothetical protein SELMODRAFT_181570 [Selaginella moellendorffii]
Length = 563
Score = 248 bits (633), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 145/192 (75%), Gaps = 1/192 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT +RE+AR+L+D++ +RVVIVDTSNEI GDGDIPH IG ARRMQV LQHK
Sbjct: 133 PGVGKTTAIREVARMLADDYDRRVVIVDTSNEIAGDGDIPHPGIGRARRMQVTNVGLQHK 192
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
+MIEAVENHMPE I++DEIGTE EA A +IA+RGV L+ TAHG +EN+IKNP L L+
Sbjct: 193 IMIEAVENHMPETIVIDEIGTELEAAAAVTIAQRGVQLVATAHGTSVENLIKNPSLEILV 252
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW-VTHKTEKSVDMLLRGK 213
GG+ +VTLGD+EAR R QKS+LERK PP F IEM R W + H ++D LL G+
Sbjct: 253 GGIQSVTLGDDEARRRGVQKSVLERKGPPAFSTAIEMASRTEWRIHHSLTATIDALLAGR 312
Query: 214 TPLVEIRKRDDR 225
+P +EIR D+
Sbjct: 313 SPSIEIRNMKDK 324
>gi|159484693|ref|XP_001700387.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272274|gb|EDO98076.1| predicted protein [Chlamydomonas reinhardtii]
Length = 324
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/229 (53%), Positives = 154/229 (67%), Gaps = 7/229 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDFFLS------YFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A+ ++ D L+ RPGVGKTT +RE+ R+ +DE +RVV+
Sbjct: 96 VVGLTCRVGRAVPGAAALVRDLVLAGRSVLLLGRPGVGKTTALREVCRIAADEAARRVVV 155
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
VDTSNEIGGDGD+PH +IG ARRMQV P QH VM+EAVENHMP+V+++DEI T AE
Sbjct: 156 VDTSNEIGGDGDVPHPSIGGARRMQVSRPEAQHAVMVEAVENHMPQVVVIDEISTLAECG 215
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IA+RGV L+ TAHG L+N+IKNP L+DL+GG+ +VTLGDEEA+ R QKSILER
Sbjct: 216 AARTIAQRGVQLVATAHGRQLDNVIKNPTLADLVGGIQSVTLGDEEAKRRGVQKSILERA 275
Query: 181 APPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNV 228
APPTF +EM ER W H +VD LL G ++R DD V
Sbjct: 276 APPTFDVAVEMEERGRWRVHLDVAAAVDSLLAGGEAAGQVRLLDDSGEV 324
>gi|298246463|ref|ZP_06970269.1| single-stranded nucleic acid binding R3H domain protein
[Ktedonobacter racemifer DSM 44963]
gi|297553944|gb|EFH87809.1| single-stranded nucleic acid binding R3H domain protein
[Ktedonobacter racemifer DSM 44963]
Length = 607
Score = 247 bits (631), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/197 (63%), Positives = 147/197 (74%), Gaps = 1/197 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT++REIARVL+DE KRVV+VDTSNEI GDGDIPH IG ARRMQV
Sbjct: 128 ILILGRPGVGKTTLLREIARVLADEANKRVVVVDTSNEIAGDGDIPHPGIGRARRMQVAR 187
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+ TAHG L N++ NP
Sbjct: 188 TVEQHAVMIEAVENHMPQVIVIDEIGTELEAAAARTIAERGVQLVATAHGNTLGNLLMNP 247
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVD 207
LSDL+GG+ TVTLGDEEAR R QKSILERKAPPTF ++E + + H+ +VD
Sbjct: 248 TLSDLVGGIQTVTLGDEEARRRHTQKSILERKAPPTFDVVVEQQSWEEVIVHRDVADTVD 307
Query: 208 MLLRGKTPLVEIRKRDD 224
+LRG + E R RD+
Sbjct: 308 TMLRGMIIVAEERTRDE 324
>gi|383788423|ref|YP_005472992.1| hypothetical protein CSE_07630 [Caldisericum exile AZM16c01]
gi|381364060|dbj|BAL80889.1| hypothetical protein CSE_07630 [Caldisericum exile AZM16c01]
Length = 496
Score = 247 bits (630), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 130/222 (58%), Positives = 155/222 (69%), Gaps = 7/222 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDFFLS------YFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L + A+Y I+ D S RPGVGKTT++RE ARVLS E KRV++
Sbjct: 101 VIGLTCRVGRAVYGTVDILKDIVTSDRNLLLLGRPGVGKTTLLREAARVLSTELGKRVIV 160
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
+DTSNEIGGDGDIPH IG ARRMQVP + Q +VMIEAVENH PEVII+DEIG EA
Sbjct: 161 IDTSNEIGGDGDIPHPGIGNARRMQVPFGTAQEEVMIEAVENHFPEVIIIDEIGRAEEAK 220
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
ACR+IAERGV LI TAHG +EN++ NP L DLIGG+ +VTL DEEA R QK++LERK
Sbjct: 221 ACRTIAERGVRLIATAHGTSIENLLVNPTLQDLIGGITSVTLSDEEAARRGTQKTVLERK 280
Query: 181 APPTFYFLIEMRERH-YWVTHKTEKSVDMLLRGKTPLVEIRK 221
+PPTF LIE+RER + + H ++VD LLRG EIRK
Sbjct: 281 SPPTFDTLIEIRERGVFAIYHDVAETVDALLRGFPVFPEIRK 322
>gi|302773391|ref|XP_002970113.1| hypothetical protein SELMODRAFT_410877 [Selaginella moellendorffii]
gi|300162624|gb|EFJ29237.1| hypothetical protein SELMODRAFT_410877 [Selaginella moellendorffii]
Length = 736
Score = 246 bits (629), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 118/192 (61%), Positives = 145/192 (75%), Gaps = 1/192 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT +RE+AR+L+D++ +RVVIVDTSNEI GDGDIPH IG ARRMQV LQHK
Sbjct: 158 PGVGKTTAIREVARMLADDYDRRVVIVDTSNEIAGDGDIPHPGIGRARRMQVTNVGLQHK 217
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
+MIEAVENHMPE I++DEIGTE EA A +IA+RGV L+ TAHG +EN+IKNP L L+
Sbjct: 218 IMIEAVENHMPETIVIDEIGTELEAAAAVTIAQRGVQLVATAHGTSVENLIKNPSLEILV 277
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW-VTHKTEKSVDMLLRGK 213
GG+ +VTLGD+EAR R QKS+LERK PP F IEM R W + H ++D LL G+
Sbjct: 278 GGIQSVTLGDDEARRRGVQKSVLERKGPPAFSTAIEMASRTEWRIHHSLTATIDALLAGR 337
Query: 214 TPLVEIRKRDDR 225
+P +EIR D+
Sbjct: 338 SPSIEIRNMKDK 349
>gi|456062084|ref|YP_007476226.1| Ycf45 (chloroplast) [Pavlova lutheri]
gi|449327271|gb|AGE93827.1| Ycf45 (chloroplast) [Pavlova lutheri]
Length = 369
Score = 246 bits (627), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/209 (60%), Positives = 155/209 (74%), Gaps = 7/209 (3%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
+PGVGKTT +REI+R+LSDE KRV+I+DTSNEI GDGDIPH AIG+ARRMQV P LQH
Sbjct: 131 KPGVGKTTAIREISRILSDEMGKRVIIIDTSNEIAGDGDIPHPAIGSARRMQVSHPELQH 190
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+MIEAVENHMP+VII+DEI TE EA A ++IAERGV LIGTAHG LE++IKNP LSDL
Sbjct: 191 HIMIEAVENHMPQVIIIDEISTELEALAAQTIAERGVKLIGTAHGNSLESLIKNPTLSDL 250
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRG 212
IGG+ VTLGDEEAR R QKS+LERK+ P F +E+ W H EK+VD +L
Sbjct: 251 IGGIQYVTLGDEEARIRGTQKSVLERKSRPAFKIGLEIGNSKAWAVHPNIEKAVDQIL-- 308
Query: 213 KTPLVEIRKRDDRFN----VVVDRWKTYD 237
+T +E + RD N V+ ++ T+D
Sbjct: 309 QTYRLENQVRDYSVNELRQVIQCKFSTFD 337
>gi|307106236|gb|EFN54482.1| hypothetical protein CHLNCDRAFT_135149 [Chlorella variabilis]
Length = 581
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 163/238 (68%), Gaps = 13/238 (5%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R V L + A+ ++ D L RPGVGKTT +REI+R+L+DE Q+
Sbjct: 109 RAGRVVGLTCRVGRAISGSAAMVADLARDGKSVLLLGRPGVGKTTAIREISRLLADECQR 168
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQ---VPEPSLQHKVMIEAVENHMPEVIIVDEI 113
RVV+VDTSNEIGGDGDIPH IG ARRMQ VP P QH+VMIEAVENHMP I++DEI
Sbjct: 169 RVVVVDTSNEIGGDGDIPHPGIGGARRMQARAVPHPEQQHRVMIEAVENHMPSTIVIDEI 228
Query: 114 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ 173
GTEAE A R+IA+RGV L+ TAHG LEN++KNP L+DL+GG+ +VTLGD+EA+ R Q
Sbjct: 229 GTEAECLAARTIAQRGVQLVATAHGNELENVVKNPSLNDLVGGIASVTLGDDEAKRRGVQ 288
Query: 174 KSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGKTPLV---EIRKRDDRFNV 228
KS+LER++PPTF +EM R W H + + +L+ +T L+ E+R+RD+ V
Sbjct: 289 KSVLERQSPPTFDACVEMVSREQWRVH-LDAAPALLVSHRTVLLRRAEVRERDESGKV 345
>gi|299830572|ref|YP_003735020.1| hypothetical protein PyulOm_p071 [Durinskia baltica]
gi|297384936|gb|ADI40235.1| hypothetical protein [Durinskia baltica]
Length = 455
Score = 243 bits (619), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 117/189 (61%), Positives = 144/189 (76%), Gaps = 1/189 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTT++REI RVL+DE +KRV+I+DTSNEI GD DIPH IG ARRMQV + QH
Sbjct: 131 RPGVGKTTIIREIGRVLADEMEKRVIIIDTSNEIAGDSDIPHFGIGRARRMQVSQTEFQH 190
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEAVENHMP+VII+DEIGT+ E A R+IAE+GV L+GT HG LEN+IKNP L++L
Sbjct: 191 QVMIEAVENHMPQVIIIDEIGTDLEVLAARTIAEKGVKLVGTTHGNCLENLIKNPSLAEL 250
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 212
IGG+ VTL DEEA+ R QKSILERKA PTF +IE+ + W H+ SVD+ LR
Sbjct: 251 IGGIKYVTLSDEEAKRRGTQKSILERKAYPTFELVIEINNSNSWTIHEDVAHSVDLFLRN 310
Query: 213 KTPLVEIRK 221
+ +IR+
Sbjct: 311 NSGKEQIRQ 319
>gi|299830371|ref|YP_003734586.1| hypothetical protein KrfoC_p076 [Kryptoperidinium foliaceum]
gi|297385073|gb|ADI40371.1| conserved hypothetical protein [Kryptoperidinium foliaceum]
Length = 455
Score = 241 bits (614), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 116/189 (61%), Positives = 145/189 (76%), Gaps = 1/189 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTT++REIARVLSDE ++RV+I+DTSNEI GD DIPH IG ARRMQV + QH
Sbjct: 131 RPGVGKTTIIREIARVLSDEMEQRVIIIDTSNEIAGDSDIPHFGIGRARRMQVSKTEFQH 190
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMIEAVENHMP+VII+DEIGT+ E A R+IAE+GV LIGT HG LEN++KNP L++L
Sbjct: 191 QVMIEAVENHMPQVIIIDEIGTDLEVLAARTIAEKGVKLIGTTHGNCLENLVKNPSLAEL 250
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRG 212
IGG+ VTL DEEA+ R QKSILERK+ PTF +IE+ W+ H+ S+D+LLR
Sbjct: 251 IGGIQYVTLSDEEAKRRGTQKSILERKSYPTFEHVIEINALKSWIIHENVSSSIDLLLRN 310
Query: 213 KTPLVEIRK 221
++R+
Sbjct: 311 LYETEQLRQ 319
>gi|242624308|ref|YP_003002226.1| conserved hypothetical plastid protein Ycf45 [Aureoumbra
lagunensis]
gi|239997416|gb|ACS36938.1| conserved hypothetical plastid protein Ycf45 [Aureoumbra
lagunensis]
Length = 340
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 154/201 (76%), Gaps = 3/201 (1%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTT++REIAR+LS+E +KRVVIVDTSNEI GD D+PH A+G ARR+QV +LQH
Sbjct: 132 RPGVGKTTIIREIARILSNELEKRVVIVDTSNEIAGDNDVPHVAVGRARRLQVKNSNLQH 191
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+ +IEAVENHMPEVII+DEIGTE EA + R+IAERGV LI T HG LEN+IKNPIL DL
Sbjct: 192 QSLIEAVENHMPEVIIIDEIGTEIEALSARTIAERGVQLIATTHGNHLENLIKNPILMDL 251
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRG 212
IGG+ +VTL D+EA+ R +KSILERK TF +IE+ + W ++ E+SVD LL+G
Sbjct: 252 IGGIQSVTLSDQEAKNRHTKKSILERKFAATFNIIIEINNYNSWTIYENVEESVDFLLKG 311
Query: 213 KTPLVEIRK--RDDRFNVVVD 231
+ P ++R D ++ +V D
Sbjct: 312 QEPNKQVRTMLSDGKYTIVSD 332
>gi|357125252|ref|XP_003564309.1| PREDICTED: uncharacterized protein ycf45-like [Brachypodium
distachyon]
Length = 650
Score = 240 bits (612), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 114/195 (58%), Positives = 149/195 (76%), Gaps = 1/195 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP +QHK
Sbjct: 200 PGVGKTTVIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQEMQHK 259
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ +AHG +EN+ NP L L+
Sbjct: 260 VLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVASAHGVTIENLTMNPSLEMLV 319
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEA RR QK++LERK P TF + +E+ + H++ E +VD LL G+
Sbjct: 320 GGIQSVTLGDEEANRRRVQKTVLERKGPSTFTYAVEIVSKTELRVHRSLEATVDALLAGR 379
Query: 214 TPLVEIRKRDDRFNV 228
P VEIRK +V
Sbjct: 380 LPNVEIRKLGSNMSV 394
>gi|449523614|ref|XP_004168818.1| PREDICTED: uncharacterized protein ycf45-like, partial [Cucumis
sativus]
Length = 640
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 150/188 (79%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+++F+KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP+ +QHK
Sbjct: 177 PGVGKTTIIREIARILANDFKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPDSDMQHK 236
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+VII+DEI T+ EA A +IA+RG+ L+ TAHG +EN+I NP+L L+
Sbjct: 237 VLIEAVENHMPQVIIIDEISTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPLLEMLV 296
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEA RR QK++LERK P TF +E+ + H++ + +VD +L G+
Sbjct: 297 GGIQSVTLGDEEASRRRVQKTVLERKGPSTFACGVEIISKTELRVHRSLDATVDAVLCGR 356
Query: 214 TPLVEIRK 221
P VE+RK
Sbjct: 357 YPNVEVRK 364
>gi|449456721|ref|XP_004146097.1| PREDICTED: uncharacterized protein ycf45-like [Cucumis sativus]
Length = 644
Score = 239 bits (611), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 150/188 (79%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+++F+KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP+ +QHK
Sbjct: 181 PGVGKTTIIREIARILANDFKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPDSDMQHK 240
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+VII+DEI T+ EA A +IA+RG+ L+ TAHG +EN+I NP+L L+
Sbjct: 241 VLIEAVENHMPQVIIIDEISTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPLLEMLV 300
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEA RR QK++LERK P TF +E+ + H++ + +VD +L G+
Sbjct: 301 GGIQSVTLGDEEASRRRVQKTVLERKGPSTFACGVEIISKTELRVHRSLDATVDAVLCGR 360
Query: 214 TPLVEIRK 221
P VE+RK
Sbjct: 361 YPNVEVRK 368
>gi|297842057|ref|XP_002888910.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297334751|gb|EFH65169.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 661
Score = 239 bits (609), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 147/188 (78%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH IG ARRMQVP +QHK
Sbjct: 201 PGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQVPNSDIQHK 260
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAHG +EN+IKNP L L+
Sbjct: 261 VLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLIKNPSLDLLV 320
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GGV +VTLGDEEA R QK++LERK PPTF E+ + H++ E +VD +L G+
Sbjct: 321 GGVQSVTLGDEEATRRGGQKTVLERKGPPTFNCGAEIVSKTEVRVHRSLEATVDAVLAGR 380
Query: 214 TPLVEIRK 221
P VEIRK
Sbjct: 381 LPNVEIRK 388
>gi|326488989|dbj|BAJ98106.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/188 (59%), Positives = 145/188 (77%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTTV+REIAR+L+D++ KRV+IVDTSNEI GDGDIPH IG ARR+QVP +QHK
Sbjct: 198 PGVGKTTVIREIARMLADDYDKRVMIVDTSNEIAGDGDIPHPGIGNARRLQVPNQEMQHK 257
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ +AHG +EN+ NP L L+
Sbjct: 258 VLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVASAHGVTIENLTMNPSLDMLV 317
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEA RR QK++LERK P TF + +E+ + H++ E +VD LL G+
Sbjct: 318 GGIQSVTLGDEEASRRRVQKTVLERKGPSTFAYAVEIVSKTELRVHRSLEATVDALLAGR 377
Query: 214 TPLVEIRK 221
P VEIRK
Sbjct: 378 MPNVEIRK 385
>gi|242092028|ref|XP_002436504.1| hypothetical protein SORBIDRAFT_10g003860 [Sorghum bicolor]
gi|241914727|gb|EER87871.1| hypothetical protein SORBIDRAFT_10g003860 [Sorghum bicolor]
Length = 657
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 145/188 (77%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP +QHK
Sbjct: 203 PGVGKTTVIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHK 262
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+
Sbjct: 263 VLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLV 322
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD LL GK
Sbjct: 323 GGIQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKKELRVHRSLEATVDALLAGK 382
Query: 214 TPLVEIRK 221
P VEIRK
Sbjct: 383 LPNVEIRK 390
>gi|125554146|gb|EAY99751.1| hypothetical protein OsI_21736 [Oryza sativa Indica Group]
Length = 582
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 145/188 (77%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP +QHK
Sbjct: 126 PGVGKTTVIREIARMLADDYRKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHK 185
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+
Sbjct: 186 VLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPSLDMLV 245
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD LL GK
Sbjct: 246 GGVQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKIELRVHRSLEDTVDALLAGK 305
Query: 214 TPLVEIRK 221
P VEIRK
Sbjct: 306 MPNVEIRK 313
>gi|125596098|gb|EAZ35878.1| hypothetical protein OsJ_20178 [Oryza sativa Japonica Group]
Length = 581
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 145/188 (77%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP +QHK
Sbjct: 126 PGVGKTTVIREIARMLADDYRKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHK 185
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+
Sbjct: 186 VLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPSLDMLV 245
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD LL GK
Sbjct: 246 GGVQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKIELRVHRSLEDTVDALLAGK 305
Query: 214 TPLVEIRK 221
P VEIRK
Sbjct: 306 MPNVEIRK 313
>gi|356514603|ref|XP_003525995.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 651
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 148/188 (78%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+++++KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP +QHK
Sbjct: 193 PGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDMQHK 252
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+
Sbjct: 253 VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPSLEMLV 312
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEA R QK++LERK P TF +E+ + H++ E +VD +L G+
Sbjct: 313 GGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELRIHRSLEATVDAILSGR 372
Query: 214 TPLVEIRK 221
P VEIRK
Sbjct: 373 FPNVEIRK 380
>gi|115466506|ref|NP_001056852.1| Os06g0155600 [Oryza sativa Japonica Group]
gi|55296694|dbj|BAD69412.1| ATPase-like [Oryza sativa Japonica Group]
gi|55297449|dbj|BAD69300.1| ATPase-like [Oryza sativa Japonica Group]
gi|113594892|dbj|BAF18766.1| Os06g0155600 [Oryza sativa Japonica Group]
Length = 643
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/188 (61%), Positives = 145/188 (77%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP +QHK
Sbjct: 188 PGVGKTTVIREIARMLADDYRKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHK 247
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+
Sbjct: 248 VLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPSLDMLV 307
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD LL GK
Sbjct: 308 GGVQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKIELRVHRSLEDTVDALLAGK 367
Query: 214 TPLVEIRK 221
P VEIRK
Sbjct: 368 MPNVEIRK 375
>gi|194707358|gb|ACF87763.1| unknown [Zea mays]
Length = 554
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 144/188 (76%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP +QHK
Sbjct: 99 PGVGKTTVIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHK 158
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+
Sbjct: 159 VLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLV 218
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD LL GK
Sbjct: 219 GGIQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKKELRVHRSLEATVDALLAGK 278
Query: 214 TPLVEIRK 221
P EIRK
Sbjct: 279 LPNFEIRK 286
>gi|145327231|ref|NP_001077817.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
gi|332197302|gb|AEE35423.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
Length = 538
Score = 236 bits (603), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 146/188 (77%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH IG ARRMQVP +QHK
Sbjct: 78 PGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQVPNSDIQHK 137
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAHG +EN+IKNP L L+
Sbjct: 138 VLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLIKNPSLDLLV 197
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD +L G+
Sbjct: 198 GGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSLEATVDAILAGR 257
Query: 214 TPLVEIRK 221
P VEIRK
Sbjct: 258 LPNVEIRK 265
>gi|255557073|ref|XP_002519569.1| Stage III sporulation protein AA, putative [Ricinus communis]
gi|223541266|gb|EEF42818.1| Stage III sporulation protein AA, putative [Ricinus communis]
Length = 726
Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 112/192 (58%), Positives = 149/192 (77%), Gaps = 1/192 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+ +++KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP QHK
Sbjct: 270 PGVGKTTIIREIARMLATDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDKQHK 329
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ T+HG +EN+I NP L L+
Sbjct: 330 VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATSHGVTIENLIVNPSLEMLV 389
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEA R QK++LERK P TF +E+ ++ H++ E +VD +L G+
Sbjct: 390 GGIQSVTLGDEEANRRGVQKTVLERKGPSTFSCAVEIIAKNELRVHRSLEATVDAILSGR 449
Query: 214 TPLVEIRKRDDR 225
P VE+RK D +
Sbjct: 450 PPNVEVRKMDSQ 461
>gi|22330595|ref|NP_177460.2| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
gi|332197301|gb|AEE35422.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
Length = 666
Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 146/188 (77%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH IG ARRMQVP +QHK
Sbjct: 206 PGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQVPNSDIQHK 265
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAHG +EN+IKNP L L+
Sbjct: 266 VLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLIKNPSLDLLV 325
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD +L G+
Sbjct: 326 GGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSLEATVDAILAGR 385
Query: 214 TPLVEIRK 221
P VEIRK
Sbjct: 386 LPNVEIRK 393
>gi|12324328|gb|AAG52137.1|AC010556_19 putative ATPase; 52924-55985 [Arabidopsis thaliana]
Length = 652
Score = 236 bits (602), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 146/188 (77%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH IG ARRMQVP +QHK
Sbjct: 206 PGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQVPNSDIQHK 265
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAHG +EN+IKNP L L+
Sbjct: 266 VLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLIKNPSLDLLV 325
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD +L G+
Sbjct: 326 GGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSLEATVDAILAGR 385
Query: 214 TPLVEIRK 221
P VEIRK
Sbjct: 386 LPNVEIRK 393
>gi|18086459|gb|AAL57683.1| At1g73170/T18K17_17 [Arabidopsis thaliana]
Length = 666
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 115/188 (61%), Positives = 145/188 (77%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH IG ARRMQVP QHK
Sbjct: 206 PGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQVPNSDTQHK 265
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAHG +EN+IKNP L L+
Sbjct: 266 VLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLIKNPSLDLLV 325
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD +L G+
Sbjct: 326 GGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSLEATVDAILAGR 385
Query: 214 TPLVEIRK 221
P VEIRK
Sbjct: 386 LPNVEIRK 393
>gi|226498156|ref|NP_001142150.1| uncharacterized protein LOC100274315 [Zea mays]
gi|223947319|gb|ACN27743.1| unknown [Zea mays]
gi|413942919|gb|AFW75568.1| hypothetical protein ZEAMMB73_728588 [Zea mays]
Length = 661
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 144/188 (76%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP +QHK
Sbjct: 206 PGVGKTTVIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHK 265
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+
Sbjct: 266 VLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLV 325
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD LL GK
Sbjct: 326 GGIQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKKELRVHRSLEATVDALLAGK 385
Query: 214 TPLVEIRK 221
P EIRK
Sbjct: 386 LPNFEIRK 393
>gi|413942920|gb|AFW75569.1| hypothetical protein ZEAMMB73_728588 [Zea mays]
Length = 572
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/188 (60%), Positives = 144/188 (76%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP +QHK
Sbjct: 206 PGVGKTTVIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHK 265
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+
Sbjct: 266 VLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLV 325
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD LL GK
Sbjct: 326 GGIQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKKELRVHRSLEATVDALLAGK 385
Query: 214 TPLVEIRK 221
P EIRK
Sbjct: 386 LPNFEIRK 393
>gi|194477061|ref|YP_002049240.1| hypothetical protein PCC_0600 [Paulinella chromatophora]
gi|171192068|gb|ACB43030.1| hypothetical protein PCC_0600 [Paulinella chromatophora]
Length = 477
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/179 (60%), Positives = 138/179 (77%), Gaps = 1/179 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PG+GKTT +REIAR+L+D+ +RV+I+DTSNEI GD DIPH +IG ARRMQV P+LQH+
Sbjct: 145 PGIGKTTALREIARLLADDLNRRVIIIDTSNEIAGDSDIPHPSIGKARRMQVANPNLQHR 204
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
+MIEA+ENH PEVI++DEIGTE EA A R+IAERG+ LI TAHG+ L +++KNP LSDL+
Sbjct: 205 MMIEAIENHTPEVIVIDEIGTEMEAQAARTIAERGIQLIATAHGDGLASLVKNPTLSDLV 264
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 212
GG+ +V LGD+EA+ R QK++LER A PTF IEM H W H VD++LR
Sbjct: 265 GGIQSVILGDDEAQRRCTQKTVLERAADPTFPVAIEMHTSHRWSIHADVAHMVDIILRN 323
>gi|224056549|ref|XP_002298905.1| predicted protein [Populus trichocarpa]
gi|222846163|gb|EEE83710.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/188 (59%), Positives = 149/188 (79%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+++++KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP+ +QHK
Sbjct: 197 PGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPDLDMQHK 256
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+
Sbjct: 257 VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLILNPSLEMLV 316
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEA R QK++LERK P TF +E+ + H++ E +VD +L G+
Sbjct: 317 GGIQSVTLGDEEANRRGVQKTVLERKGPSTFSCGVEIISKTELRVHRSLEATVDAILSGR 376
Query: 214 TPLVEIRK 221
+P VE+ K
Sbjct: 377 SPHVEVCK 384
>gi|302142922|emb|CBI20217.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 234 bits (596), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/188 (58%), Positives = 146/188 (77%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++RE+AR+L+++++KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP +QHK
Sbjct: 115 PGVGKTTIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDMQHK 174
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+
Sbjct: 175 VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLV 234
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEA R QK++LERK P TF +E+ + H + E +VD +L G+
Sbjct: 235 GGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELQVHPSLEATVDAILSGR 294
Query: 214 TPLVEIRK 221
P E+RK
Sbjct: 295 FPHFEVRK 302
>gi|225461612|ref|XP_002282987.1| PREDICTED: uncharacterized protein ycf45 [Vitis vinifera]
Length = 667
Score = 233 bits (594), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 110/188 (58%), Positives = 146/188 (77%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++RE+AR+L+++++KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP +QHK
Sbjct: 210 PGVGKTTIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDMQHK 269
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+
Sbjct: 270 VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLV 329
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLGDEEA R QK++LERK P TF +E+ + H + E +VD +L G+
Sbjct: 330 GGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELQVHPSLEATVDAILSGR 389
Query: 214 TPLVEIRK 221
P E+RK
Sbjct: 390 FPHFEVRK 397
>gi|303287638|ref|XP_003063108.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455744|gb|EEH53047.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 766
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 126/252 (50%), Positives = 152/252 (60%), Gaps = 53/252 (21%)
Query: 34 RPGVGKTTVMREIARVLS----------------------------------DEFQ---- 55
RPGVGKTT +REIARVLS D FQ
Sbjct: 302 RPGVGKTTAIREIARVLSGASYLTLDFSRRLSPPRVPRFQSRHTSTPFNSASDAFQLHPF 361
Query: 56 --------------KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVE 101
+RVV+VDTSNEIGGDGD+PH IG ARRMQV EPS QH +IEAV+
Sbjct: 362 NVRSYGQLPSDDCGRRVVVVDTSNEIGGDGDVPHPGIGGARRMQVTEPSEQHATLIEAVQ 421
Query: 102 NHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVT 161
NH P+V++VDEIGTE E A R+I++RGV +I TAHG LEN++KNP L+DL+GGV +VT
Sbjct: 422 NHTPQVVVVDEIGTELECAAARTISQRGVQMIATAHGHTLENVLKNPSLNDLVGGVVSVT 481
Query: 162 LGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIR 220
LGD+EAR RR QK+ LER+ PPTF +E+RE WV H +VD LL G P VE+R
Sbjct: 482 LGDDEARKRRAQKTTLEREGPPTFGAAVEIRETGKWVVHLDVGVAVDTLLAGYAPPVELR 541
Query: 221 KRDDRFNVVVDR 232
DD V+ R
Sbjct: 542 SVDDATGRVMSR 553
>gi|442324641|ref|YP_007364662.1| hypothetical protein MYSTI_07706 [Myxococcus stipitatus DSM 14675]
gi|441492283|gb|AGC48978.1| hypothetical protein MYSTI_07706 [Myxococcus stipitatus DSM 14675]
Length = 604
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 132/225 (58%), Positives = 156/225 (69%), Gaps = 7/225 (3%)
Query: 6 NVFLLIVKFFYALYSINKIIFDFFLS------YFRPGVGKTTVMREIARVLSDEFQKRVV 59
V L ++ A+Y ++ D S RPGVGKTT +RE+ARVL+D+ KRV+
Sbjct: 103 QVVGLTLRVGRAVYGTIDMLKDLIGSGRNVLLLGRPGVGKTTKLREVARVLADDLGKRVM 162
Query: 60 IVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 119
+VDTSNEIGGDGD+PH IG ARRMQV P QH VMIEAVENHMPE IIVDEIGT AEA
Sbjct: 163 VVDTSNEIGGDGDVPHPGIGGARRMQVSRPDRQHDVMIEAVENHMPEAIIVDEIGTSAEA 222
Query: 120 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILER 179
A R+IAERGV L+ TAHG LEN++ NP LSDL+GGV TVTL D+EAR RR QK++ ER
Sbjct: 223 AAARTIAERGVQLVATAHGNTLENLVLNPTLSDLVGGVHTVTLSDDEARRRRTQKTVSER 282
Query: 180 KAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRD 223
KAPPTF ++EM R H T ++VD LL GK E R RD
Sbjct: 283 KAPPTFDIVVEMVNRDEVRVHADTAEAVDRLLAGKEVGGERRWRD 327
>gi|444914392|ref|ZP_21234535.1| hypothetical protein D187_06705 [Cystobacter fuscus DSM 2262]
gi|444714624|gb|ELW55503.1| hypothetical protein D187_06705 [Cystobacter fuscus DSM 2262]
Length = 582
Score = 229 bits (584), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 130/223 (58%), Positives = 154/223 (69%), Gaps = 7/223 (3%)
Query: 6 NVFLLIVKFFYALYSINKIIFDFFLS------YFRPGVGKTTVMREIARVLSDEFQKRVV 59
V L ++ A++ ++ D S RPGVGKTT +RE+ARVL+D+ KRV+
Sbjct: 105 KVVGLTLRVGRAIFGTIDMLKDLIASGQNILLLGRPGVGKTTKLREVARVLADDLGKRVM 164
Query: 60 IVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 119
+VDTSNEIGGDGDIPH IG ARRMQV P QH VMIEAVENHMPE IIVDEIGT AEA
Sbjct: 165 VVDTSNEIGGDGDIPHPGIGGARRMQVSRPDRQHDVMIEAVENHMPEAIIVDEIGTSAEA 224
Query: 120 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILER 179
A R+IAERGV L+ TAHG LEN++ NP LSDL+GGV TVTL DEEAR R QK+I ER
Sbjct: 225 AAARTIAERGVQLVATAHGNTLENLVLNPTLSDLVGGVHTVTLSDEEARRRHTQKTITER 284
Query: 180 KAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRK 221
K PPTF ++EM R H T ++VD LL G+ P E R+
Sbjct: 285 KGPPTFDVVVEMVSRDEVRVHGDTAEAVDRLLAGEVPGGEQRQ 327
>gi|147816324|emb|CAN66201.1| hypothetical protein VITISV_007543 [Vitis vinifera]
Length = 693
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/188 (57%), Positives = 144/188 (76%), Gaps = 1/188 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++RE+AR+L+++++KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP +QHK
Sbjct: 236 PGVGKTTIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDMQHK 295
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+
Sbjct: 296 VLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLV 355
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ +VTLG EEA R Q ++LERK P TF +E+ + H + E +VD +L G+
Sbjct: 356 GGIQSVTLGXEEASRRGVQXTVLERKGPSTFSCGVEIISKTELQVHPSLEATVDAILSGR 415
Query: 214 TPLVEIRK 221
P E+RK
Sbjct: 416 FPHFEVRK 423
>gi|310817928|ref|YP_003950286.1| single-stranded nucleic acid binding r3h [Stigmatella aurantiaca
DW4/3-1]
gi|309391000|gb|ADO68459.1| Single-stranded nucleic acid binding R3H [Stigmatella aurantiaca
DW4/3-1]
Length = 544
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 154/214 (71%), Gaps = 7/214 (3%)
Query: 7 VFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQKRVVI 60
V L ++ A++ ++ D L RPGVGKTT +RE+ARVL+D+ +KRV++
Sbjct: 120 VVGLTLRVGRAVFGTIDMLKDLIGTGRNVLLLGRPGVGKTTKLREVARVLADDLRKRVMV 179
Query: 61 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
VDTSNEIGGDGDIPH IG ARRMQV P QH VMIEAVENHMPE IIVDEIGT AEA
Sbjct: 180 VDTSNEIGGDGDIPHPGIGGARRMQVSRPDRQHDVMIEAVENHMPEAIIVDEIGTSAEAA 239
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERK 180
A R+IAERGV L+ TAHG LEN++ NP LSDL+GGV TVTL DEEAR R QK++ ERK
Sbjct: 240 AARTIAERGVQLVATAHGNTLENLVLNPTLSDLVGGVHTVTLSDEEARRRNTQKTVSERK 299
Query: 181 APPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGK 213
APPTF +++M R + H+ T ++VD LL G+
Sbjct: 300 APPTFDLVVQMVGRDEVLVHRDTAEAVDRLLAGQ 333
>gi|403225170|gb|AFR24782.1| conserved hypothetical plastid protein Ycf45 [uncultured
Pelagomonas]
Length = 330
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 106/182 (58%), Positives = 140/182 (76%), Gaps = 1/182 (0%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
+PG GKTT++REIAR+ S+E +KRVVIVDTSNEI GD D+PH A+G ARR+QV + LQH
Sbjct: 131 KPGSGKTTIIREIARIFSNELEKRVVIVDTSNEIAGDNDVPHVAVGRARRLQVKKFDLQH 190
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+V+IEAVENHMPEVII+DEI TE E + R+IAERGV LI TAHG L N++KNPIL +L
Sbjct: 191 QVLIEAVENHMPEVIIIDEISTETETLSARTIAERGVQLIATAHGNSLVNLVKNPILVNL 250
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRG 212
IGG+ +VTL D+ A+ R +KS+LER+ TF +IE+ W+ + K E++VD++L G
Sbjct: 251 IGGIQSVTLSDQSAKLRNTKKSVLERQFAATFDLIIEISSSDSWIIYDKVEEAVDLILNG 310
Query: 213 KT 214
+
Sbjct: 311 EN 312
>gi|384248329|gb|EIE21813.1| hypothetical protein COCSUDRAFT_53863 [Coccomyxa subellipsoidea
C-169]
Length = 499
Score = 226 bits (576), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 111/167 (66%), Positives = 132/167 (79%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RPGVGKTTV+RE +R+LS QKRVVI+DTSNEIGGDGDI H IG ARRMQV + + QH
Sbjct: 96 RPGVGKTTVIRETSRLLSQLHQKRVVIIDTSNEIGGDGDIAHIGIGRARRMQVSKVAAQH 155
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+ MIEAVENHMPEV+IVDEIGTEAEA A RSIA+RGV L+ TAHG L +IKNP LSDL
Sbjct: 156 RTMIEAVENHMPEVVIVDEIGTEAEALAARSIAQRGVQLVATAHGGELARLIKNPTLSDL 215
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH 200
IGG+ VTL DEEA+ R+ K+++ER APPTF +E+ +R+ W H
Sbjct: 216 IGGIQAVTLSDEEAKRRKGPKTVIERCAPPTFDVAVEIIDRNTWRVH 262
>gi|110740513|dbj|BAE98362.1| hypothetical protein [Arabidopsis thaliana]
Length = 449
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 135/174 (77%), Gaps = 1/174 (0%)
Query: 49 VLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVI 108
+L+DE +KRVVIVDTSNEIGGDGD+PHS IG ARRMQVP +LQH VMIEAVENHMPE I
Sbjct: 1 MLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNLQHDVMIEAVENHMPETI 60
Query: 109 IVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEAR 168
I+DEIGTE EA A +IA+RGV L+ TAHG ++NIIKNP L LIGG+++VTLGDEEAR
Sbjct: 61 IIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKNPSLQILIGGIESVTLGDEEAR 120
Query: 169 ARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRK 221
R+ QK+ILERK PPTF +EM R H + + +VD +L GK+ EIR+
Sbjct: 121 KRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTVDAILAGKSAPFEIRQ 174
>gi|88811456|ref|ZP_01126711.1| Single-stranded nucleic acid binding R3H [Nitrococcus mobilis
Nb-231]
gi|88791345|gb|EAR22457.1| Single-stranded nucleic acid binding R3H [Nitrococcus mobilis
Nb-231]
Length = 513
Score = 222 bits (566), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 124/217 (57%), Positives = 152/217 (70%), Gaps = 7/217 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDF------FLSYFRPGVGKTTVMREIARVLSDEFQK 56
R V L ++ A++ I D L PG+GKTT +REIARVL+DE +
Sbjct: 96 RTGTVVGLTLRVGRAVFGTIDAIHDLIAQGGSLLLLGPPGIGKTTRLREIARVLADECAR 155
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RV+++DTSNEI GDGDIPH IG ARRMQV P QH+VMIEAVENHMPEVIIVDEIGT
Sbjct: 156 RVIVIDTSNEIAGDGDIPHPGIGCARRMQVAHPDRQHRVMIEAVENHMPEVIIVDEIGTS 215
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
AEA A R+IAERGV LIGTAHG LEN++ NP L+DL+GGV TVTL DEEARAR QK++
Sbjct: 216 AEAAAARTIAERGVQLIGTAHGTTLENLVLNPTLADLVGGVQTVTLSDEEARARGTQKTV 275
Query: 177 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 212
ER PPTF ++E+ +R + H+ ++VD +L G
Sbjct: 276 SERCGPPTFDAVVEIVDRERLLIHRDAGRAVDAILSG 312
>gi|147841865|emb|CAN66926.1| hypothetical protein VITISV_011830 [Vitis vinifera]
Length = 678
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 111/177 (62%), Positives = 135/177 (76%), Gaps = 11/177 (6%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DE KRVVIVDTSNEIGGDGD+PHS IG A+
Sbjct: 222 PGVGKTTLIREIARMLADEHMKRVVIVDTSNEIGGDGDVPHSGIGRAK----------ED 271
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAHG ++NI+KNP L L+
Sbjct: 272 VMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIDNIMKNPSLQILV 331
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLL 210
GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H V H+ + +VD +L
Sbjct: 332 GGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTHCRVHHRLDATVDAIL 388
>gi|383459841|ref|YP_005373830.1| hypothetical protein COCOR_07880 [Corallococcus coralloides DSM
2259]
gi|380731791|gb|AFE07793.1| hypothetical protein COCOR_07880 [Corallococcus coralloides DSM
2259]
Length = 564
Score = 216 bits (551), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 122/197 (61%), Positives = 142/197 (72%), Gaps = 1/197 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPGVGKTT +RE+ARVL+D KRV++VDTSNEIGGDGDIPH IG ARRMQV
Sbjct: 129 LLLLGRPGVGKTTKLREVARVLADALGKRVMVVDTSNEIGGDGDIPHPGIGGARRMQVSR 188
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
P QH VMIEAVENHMPE I+VDEIGT AEA A R+IAERGV L+ TAHG LEN++ NP
Sbjct: 189 PDRQHDVMIEAVENHMPEAIVVDEIGTAAEAAAARTIAERGVQLVATAHGNTLENLVLNP 248
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVD 207
LSDL+GGV TVTL D+EAR R QK++ ERK PTF ++EM R H+ T +VD
Sbjct: 249 TLSDLVGGVQTVTLSDDEARRRGTQKTVTERKGTPTFDIVVEMVNRDEVRVHRDTGGAVD 308
Query: 208 MLLRGKTPLVEIRKRDD 224
LL G E R++ D
Sbjct: 309 RLLTGAEVGGEKRRQQD 325
>gi|440792694|gb|ELR13902.1| sporulation proteinrelated, putative [Acanthamoeba castellanii str.
Neff]
Length = 786
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 138/200 (69%), Gaps = 4/200 (2%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PG+GKT+V+RE+AR L+ E+ V+IVDTSNEI GDGDIPH AIG ARRMQVP+ S QHK
Sbjct: 535 PGMGKTSVIREMARELAREWS--VMIVDTSNEIAGDGDIPHPAIGAARRMQVPQASEQHK 592
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
MIEAV+NH P+VIIVDEIGT EA AC +IA RGVML+ TAHG L +++ NP L+ ++
Sbjct: 593 RMIEAVQNHTPDVIIVDEIGTAEEAKACCTIARRGVMLVATAHGVTLSDVVDNPSLNSVV 652
Query: 155 GGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRG 212
GGV+ V L D A AR QK++ E + P F IE+R R WV H +V+ LL G
Sbjct: 653 GGVEAVILSDAAALARGSAQKTVRESRGPSAFGLAIELRSRSEWVVHDDVRANVNRLLAG 712
Query: 213 KTPLVEIRKRDDRFNVVVDR 232
K VE+R+R VV R
Sbjct: 713 KPMAVEVRRRLADGRVVATR 732
>gi|307109172|gb|EFN57410.1| hypothetical protein CHLNCDRAFT_21069 [Chlorella variabilis]
Length = 258
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 132/180 (73%), Gaps = 3/180 (1%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++R++A +LSD F ++VV+VDTSNE+ GDG PH+ IG+ARRM VP S QH
Sbjct: 74 PGVGKTTLLRDVASLLSDTFSQKVVVVDTSNEVAGDGSEPHACIGSARRMMVP--SQQHS 131
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIE V+NHMP+V+IVDEIGT E ACRSIA RGV+L+GTAHG L+ +++NP L+ LI
Sbjct: 132 VMIETVQNHMPDVVIVDEIGTAREVEACRSIAHRGVVLVGTAHGRSLKALMRNPDLNGLI 191
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
GG+ VTLGDEEAR K+ ER+ P F L+E+ R W H + +SVD +L G+
Sbjct: 192 GGIHQVTLGDEEARRSNHGKTRTERRGEPAFSTLVEVLSRSRWRVHMSVARSVDDMLAGR 251
>gi|356534378|ref|XP_003535732.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 568
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/130 (71%), Positives = 113/130 (86%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++REIAR+L+DEF+KRVVIVDTSNEIGGDGD+PH+ IG ARR QVP ++QH
Sbjct: 179 PGVGKTTLIREIARMLADEFRKRVVIVDTSNEIGGDGDVPHAGIGRARRTQVPNVNMQHG 238
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
VMIEA+ENHMPE II+DEIGTE EA A +IA+RGV L+GTAHG +ENIIKNP L L+
Sbjct: 239 VMIEAIENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIENIIKNPYLQILV 298
Query: 155 GGVDTVTLGD 164
GG+++VTLG+
Sbjct: 299 GGIESVTLGE 308
>gi|11465517|ref|NP_045092.1| hypothetical protein CycaCp075 [Cyanidium caldarium]
gi|14424118|sp|O19920.1|YCF45_CYACA RecName: Full=Uncharacterized protein ycf45
gi|2465740|gb|AAB82669.1| unknown [Cyanidium caldarium]
Length = 335
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 104/225 (46%), Positives = 145/225 (64%), Gaps = 7/225 (3%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFF------LSYFRPGVGKTTVMREIARVLSDEFQK 56
R N+ L + I II D L RPG+GKT+ +REI+R+LS+E K
Sbjct: 94 RYGNIVGLTYRIGREFIGIGPIIRDLIESNQSTLLIGRPGIGKTSFIREISRILSNEIMK 153
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RV+IVD++NEI G+G PH + G ARRM+V + QH+VMIEA+ENH PE+II+DEIGTE
Sbjct: 154 RVIIVDSANEISGEGCCPHISTGKARRMEVQSINSQHEVMIEAIENHTPEIIIIDEIGTE 213
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
E+ A SI++RG+ LIG+AH L N+ KNP L L+GG+++VTL D +A R+ +K+I
Sbjct: 214 YESQAAISISQRGIRLIGSAHSSDLFNLAKNPTLCKLVGGIESVTLSDTQAILRKTKKTI 273
Query: 177 LERKAPPTFYFLIEM-RERHYWVTHKTEKSVDMLLRGKTPLVEIR 220
LERK F IE+ ++R V E+S+D +L G+ +IR
Sbjct: 274 LERKGCSCFNATIEINKKRTVKVYTSVEQSIDAILEGRVNNSQIR 318
>gi|440794844|gb|ELR15989.1| R3H domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 441
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 123/170 (72%), Gaps = 12/170 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PG+GKT+V+RE+AR L++E+ V+IVDTSNEI G GDIPH+AIG ARRMQV S QHK
Sbjct: 256 PGMGKTSVLREMARELANEWS--VMIVDTSNEIAGAGDIPHTAIGEARRMQVLPGSGQHK 313
Query: 95 VMIEAVENHMPEVIIVDE---------IGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
MIEAV+NH P++IIVDE IGT++EA AC +IA RGVML+ TAHG L++++
Sbjct: 314 CMIEAVQNHTPDIIIVDEVCPISEWPCIGTKSEAAACCTIARRGVMLVATAHGLTLQDVV 373
Query: 146 KNPILSDLIGGVDTVTLGDEEARARRCQ-KSILERKAPPTFYFLIEMRER 194
NP L+ ++GGV +VTLGD+ R R + K++ E K P F IE+R R
Sbjct: 374 DNPGLNSVVGGVQSVTLGDDAVRERGAKHKTVRECKGPSAFAVAIELRSR 423
>gi|159481614|ref|XP_001698873.1| hypothetical protein CHLREDRAFT_151995 [Chlamydomonas reinhardtii]
gi|158273365|gb|EDO99155.1| predicted protein [Chlamydomonas reinhardtii]
Length = 715
Score = 179 bits (454), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 94/184 (51%), Positives = 129/184 (70%), Gaps = 2/184 (1%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPG GKTTV+R+IAR+L+D+ +RVV+VDTSNEI GD PH IG+ARRM VP
Sbjct: 428 LLLVGRPGSGKTTVLRDIARLLADDLDRRVVVVDTSNEIAGDDPTPHPCIGSARRMMVPR 487
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
L +VM+EAV+NH PEV++VDEI +E E A +SIA+RGVML+ T HG L+ +++N
Sbjct: 488 RELLWRVMLEAVQNHGPEVLVVDEISSEEEVLAAQSIAQRGVMLVATTHGPSLKALLRNH 547
Query: 149 ILSDLIGGVDTVTLGDEEAR-ARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 206
L+ L+GG++ VT+GD AR + K+ LERK PTF ++E++ + H T +SV
Sbjct: 548 TLNPLLGGIEVVTIGDVAARESNSGNKTRLERKDMPTFAAVVEVKPGGRLLVHPDTAESV 607
Query: 207 DMLL 210
D+LL
Sbjct: 608 DLLL 611
>gi|224030195|gb|ACN34173.1| unknown [Zea mays]
Length = 442
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/143 (58%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
Query: 84 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 143
MQVP+ ++QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +E+
Sbjct: 1 MQVPKVTMQHNVMIEAVENHMPEVIVIDEIGTELEAMAATTIAQRGVQLVGTAHGVTIES 60
Query: 144 IIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKT 202
IIKNP L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + V H+
Sbjct: 61 IIKNPCLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFLCAVEMISKTECRVHHRL 120
Query: 203 EKSVDMLLRGKTPLVEIRKRDDR 225
+ +VD +L GK P E RK ++
Sbjct: 121 DATVDAILAGKPPKFEARKMHNK 143
>gi|290995997|ref|XP_002680569.1| predicted protein [Naegleria gruberi]
gi|284094190|gb|EFC47825.1| predicted protein [Naegleria gruberi]
Length = 303
Score = 170 bits (430), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 86/158 (54%), Positives = 120/158 (75%), Gaps = 4/158 (2%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
+PG GKTT +R+ A+ LS+ +RVV+VDTS EIGG GDIPH AIG ARRMQV + Q
Sbjct: 150 KPGAGKTTFIRDFAKTLSES--RRVVVVDTSCEIGGFGDIPHVAIGKARRMQVADIRRQQ 207
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMI+AV+NH PEVI++DEIGT+ E R+I++RGV+L G+AHG+ +++I+KNPIL DL
Sbjct: 208 EVMIQAVQNHTPEVIVIDEIGTKDEVSTARTISQRGVILCGSAHGD-MKSILKNPILCDL 266
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM 191
+GGV++V +GD A +R +K L+ KA P F +I++
Sbjct: 267 LGGVESVIMGDRNA-SRDGEKMRLQLKADPVFDVVIQL 303
>gi|390337533|ref|XP_785121.2| PREDICTED: uncharacterized protein LOC579939 [Strongylocentrotus
purpuratus]
Length = 1849
Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats.
Identities = 76/178 (42%), Positives = 114/178 (64%), Gaps = 3/178 (1%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGK+T++RE ARV++D +RVVIVDT NEI GDGD+PH A+G ARR+Q+P+ Q
Sbjct: 1637 PGVGKSTILREAARVINDVVMRRVVIVDTCNEIAGDGDVPHPAVGGARRVQLPDRDSQPN 1696
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
++ E V NH P +++DE+ TEA+A A + ERG+ +I A G+ L+++I NP L L
Sbjct: 1697 MIREIVRNHSPHTLVIDEVVTEADAAAVHATRERGIQVISAAPGQTLQDVILNPKLRHLF 1756
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLR 211
GG+ + + +I++R P F L+EM +RH W+ H +S+D+ L+
Sbjct: 1757 GGIHNMAMSHPGQGI--TGHTIMQRTQPAAFDILVEMYDRHRWIVHTDFTRSIDLCLQ 1812
>gi|290985586|ref|XP_002675506.1| predicted protein [Naegleria gruberi]
gi|284089103|gb|EFC42762.1| predicted protein [Naegleria gruberi]
Length = 508
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/222 (40%), Positives = 134/222 (60%), Gaps = 14/222 (6%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFFLSYFR------PGVGKTTVMREIARVLSDEFQK 56
R+ NV L ++ A+ I ++ D S P GK+T++R+++RVLS+ Q
Sbjct: 260 RIGNVIGLTIRIGRAVVGIGELFKDVTNSNENILLVGIPNSGKSTLIRDLSRVLSE--QN 317
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
RVVIVDTS EI G GD+PHSA G +RR+ V +P Q M+ AV+NH P+VI++DEI
Sbjct: 318 RVVIVDTSCEIAGLGDVPHSATGDSRRIPVKDPKNQRVDMLRAVQNHSPQVIVIDEISDS 377
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
E CR+I++RGV L +AHG LE ++ NP+L DL+GGV VT+ D+ AR + QK I
Sbjct: 378 KEVQTCRTISQRGVRLCASAHG-TLEKLLVNPVLRDLLGGVGDVTVSDDSARQKGGQKII 436
Query: 177 LERKAPPTFYFLIEMRERHY----WVTHKTEK-SVDMLLRGK 213
+ K P F +IE+++ W+ + K +V +L G+
Sbjct: 437 NQMKGSPIFGIIIEVKKSQNGDTEWIIYNNVKETVRSILNGQ 478
>gi|159466478|ref|XP_001691436.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279408|gb|EDP05169.1| predicted protein [Chlamydomonas reinhardtii]
Length = 382
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/167 (49%), Positives = 112/167 (67%), Gaps = 1/167 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPG GKTT++R+IAR L+D+ VV+VDTSNEI G +PHS IG+ARR++V
Sbjct: 214 LLLLGRPGAGKTTLLRDIARFLADDLGLSVVVVDTSNEIAGGDTVPHSCIGSARRLKVGR 273
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
VM+EAV+NH P+V++VDE+G+ EA A RSI++RGVML+ TAHG L +I+ NP
Sbjct: 274 RDQLQAVMLEAVQNHGPQVVVVDELGSRQEAEAARSISQRGVMLVATAHGTDLRSIMGNP 333
Query: 149 ILSDLIGGVDTVTL-GDEEARARRCQKSILERKAPPTFYFLIEMRER 194
L+ L+GG+ TV L A K+ ER+ PTF L+E++ R
Sbjct: 334 DLNSLVGGMQTVILGDAAAGAAHGGAKTRTERRGEPTFRCLVEVQGR 380
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%), Gaps = 1/82 (1%)
Query: 118 EAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL-GDEEARARRCQKSI 176
EA A RSI++RGVML+ TAHG L +I+ NP L+ L+GG+ TV L A K+
Sbjct: 63 EAEAARSISQRGVMLVATAHGTDLRSIMGNPDLNSLVGGMQTVILGDAAAGAAHGGAKTR 122
Query: 177 LERKAPPTFYFLIEMRERHYWV 198
ER+ PTF L+E++ R ++
Sbjct: 123 TERRGEPTFRCLVEVQGRGMFL 144
>gi|159466496|ref|XP_001691445.1| hypothetical protein CHLREDRAFT_145023 [Chlamydomonas reinhardtii]
gi|158279417|gb|EDP05178.1| predicted protein [Chlamydomonas reinhardtii]
Length = 415
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/164 (49%), Positives = 111/164 (67%), Gaps = 1/164 (0%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
L RPG GKTT++R+IAR L+D+ VV+VDTSNEI G +PHS IG+ARR++V
Sbjct: 210 LLLLGRPGAGKTTLLRDIARFLADDLGLSVVVVDTSNEIAGGDAVPHSCIGSARRLKVGR 269
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
VM+EAV+NH P+V++VDE+G+ EA A RSI++RGVML+ TAHG L +I+ NP
Sbjct: 270 RDQLQAVMLEAVQNHGPQVVVVDELGSRQEAEAARSISQRGVMLVATAHGTDLRSIMGNP 329
Query: 149 ILSDLIGGVDTVTL-GDEEARARRCQKSILERKAPPTFYFLIEM 191
L+ L+GG+ TV L A+ K+ ER+ PTF L+E+
Sbjct: 330 DLNSLVGGMQTVILGDAAAGAAQGGAKTRTERRGEPTFRCLVEV 373
>gi|298705543|emb|CBJ28810.1| expressed unknown protein [Ectocarpus siliculosus]
Length = 305
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 88/198 (44%), Positives = 126/198 (63%), Gaps = 8/198 (4%)
Query: 30 LSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPH-SAIGTARRMQVPE 88
L +PG GKTTV+R+I R +S E + VVIVDTSNEI GDG IPH +AIG +RRM VP+
Sbjct: 77 LVLGKPGCGKTTVLRDICRKISQE--QTVVIVDTSNEIAGDGHIPHLAAIGQSRRMMVPD 134
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
+ QH VM EA++NH P+ I+VDE+ + EA AC I RGV ++ +AHG+ L+++++NP
Sbjct: 135 KTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGD-LQSLLENP 193
Query: 149 ILSDLIGGVDTVTLGDEEARARRCQKSIL-ERKAPPTFYFLIEMR--ERHYW-VTHKTEK 204
L+ L+GG +VTLGD A A + +R P F ++E+ + + W + +
Sbjct: 194 ELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWTIVWNVDL 253
Query: 205 SVDMLLRGKTPLVEIRKR 222
+VD +L GK V R R
Sbjct: 254 AVDAILSGKPYKVSQRTR 271
>gi|291000444|ref|XP_002682789.1| predicted protein [Naegleria gruberi]
gi|284096417|gb|EFC50045.1| predicted protein [Naegleria gruberi]
Length = 282
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 75/129 (58%), Positives = 102/129 (79%), Gaps = 3/129 (2%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
+PG GKTT +R+ A+ LS+ +RVV+VDTS EIGG GD+PH AIG ARRMQV + Q
Sbjct: 157 KPGSGKTTFIRDFAKTLSES--RRVVVVDTSCEIGGFGDVPHVAIGKARRMQVADIRRQQ 214
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+VMI+AV+NH PEVI++DEIGT E R+IA+RGV+L G+AHG+ +++I+KNPIL DL
Sbjct: 215 EVMIQAVQNHTPEVIVIDEIGTRDEVSTARTIAQRGVVLCGSAHGD-MKSILKNPILCDL 273
Query: 154 IGGVDTVTL 162
+GGV++V +
Sbjct: 274 LGGVESVIM 282
>gi|301109912|ref|XP_002904036.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096162|gb|EEY54214.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 392
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/226 (40%), Positives = 127/226 (56%), Gaps = 15/226 (6%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDT 63
LRN ++ + NK + L PG GKTT++R++AR +S E + V I+DT
Sbjct: 166 LRNAACVLTDLLLSNKHANKSV----LVLGHPGSGKTTLIRDVARCVS-ETMENVCIIDT 220
Query: 64 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
SNEIGGDG +PH +G ARRM VP Q VM+E V+NH E +IVDEIG +AE A
Sbjct: 221 SNEIGGDGLVPHECVGWARRMMVPSLEAQAGVMVECVQNHTVETLIVDEIGRKAEVLAAS 280
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPP 183
++ +RG LI +AHG++ +IKNP L L+GG VT+GD+EA++ K +R P
Sbjct: 281 TVRQRGPRLIASAHGDF-RALIKNPDLKGLVGGSQQVTIGDKEAKSLNKGKLQTQRAGNP 339
Query: 184 TFYFLIEM------RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRD 223
F ++E+ R R W +VD +L G E R+ D
Sbjct: 340 IFDVIVELDHVVRGRCRIIW---DVATAVDNVLEGNDYAFETRRWD 382
>gi|30692846|ref|NP_849744.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
gi|110737929|dbj|BAF00902.1| hypothetical protein [Arabidopsis thaliana]
gi|332193461|gb|AEE31582.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
Length = 303
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 66/88 (75%), Positives = 78/88 (88%)
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGK 213
IGG++TVTLGDEEARARR QKSILERKAPPTFYFLIEMRER YW+ H+TEKSVDMLLRG+
Sbjct: 216 IGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEMRERDYWIAHQTEKSVDMLLRGR 275
Query: 214 TPLVEIRKRDDRFNVVVDRWKTYDRHDI 241
P+VE+R+RD+ + VV++RWK YD I
Sbjct: 276 NPMVEVRRRDEEYKVVIERWKAYDGQGI 303
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 49/68 (72%), Positives = 52/68 (76%), Gaps = 4/68 (5%)
Query: 12 VKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDG 71
+ Y L K I L RPGVGKTTV+REIARVLSDEFQKRVVI+DTSNEIGGDG
Sbjct: 154 IDMLYDLLHYGKSI----LFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIGGDG 209
Query: 72 DIPHSAIG 79
DIPHSAIG
Sbjct: 210 DIPHSAIG 217
>gi|340054200|emb|CCC48495.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 537
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 83/182 (45%), Positives = 116/182 (63%), Gaps = 7/182 (3%)
Query: 34 RPGVGKTTVMREIARVLSDE-FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 92
+ GVGKTT++R+IA LS + + RVV+VDTSNEIGGD +P +G RR+QVP Q
Sbjct: 258 KAGVGKTTLLRDIATSLSRKPCRPRVVVVDTSNEIGGDSPVPLPFLGRCRRIQVPRREDQ 317
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
+M + ++NH PE ++VDEI T AEA A SI++RGV LI T HGE L +++N L+
Sbjct: 318 GDLMKQVLQNHSPEYVVVDEISTAAEAEAAWSISQRGVCLIATCHGESLAGVLQNQTLNL 377
Query: 153 LIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSVDM 208
L+GG L +EE R R + +K++LER P F F+ E+ R H +V ++VD
Sbjct: 378 LVGGTAQAFLSNEERRLRNKLKKTVLERPYPSPFKFVAELNSRNTAHVYV--DVNQAVDC 435
Query: 209 LL 210
LL
Sbjct: 436 LL 437
>gi|428178844|gb|EKX47717.1| hypothetical protein GUITHDRAFT_69358 [Guillardia theta CCMP2712]
Length = 353
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 107/177 (60%), Gaps = 8/177 (4%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP---- 89
RP GKTT +RE AR LS++ + VV+VD + EIGGDG +PH AIG AR + V
Sbjct: 140 RPNSGKTTCLREFARRLSEDKNQIVVVVDKTCEIGGDGIVPHPAIGNARWLPVETLKKDG 199
Query: 90 ---SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+LQH+ M EAVEN P V+IVDEI + E A R++++RG+ +I HG L ++
Sbjct: 200 QMFNLQHERMREAVENQSPHVVIVDEISSATEVEAIRTMSQRGIRIIAAVHGGTLPMLLH 259
Query: 147 NPILSDLIGGVDTVTLGDEEARARR-CQKSILERKAPPTFYFLIEMRERHYWVTHKT 202
+P + L GG TV L EEA R+ QKS+L R P F +EM ER+ W+ H+
Sbjct: 260 DPDRAALTGGCHTVLLSGEEANKRKDKQKSVLMRMHEPMFQMAVEMHERNRWILHRN 316
>gi|397568725|gb|EJK46301.1| hypothetical protein THAOC_35034 [Thalassiosira oceanica]
Length = 710
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/219 (38%), Positives = 120/219 (54%), Gaps = 32/219 (14%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRV---------------------VIVDTSNEIGGDGDI 73
PG GKTT++R+IA+ LSD + VDTSNEI GDG +
Sbjct: 479 PGSGKTTIVRDIAKELSDRANVFIGKWSTFPCLFGGSSLTSNPPHAAVDTSNEIAGDGGV 538
Query: 74 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 133
PH +G +RRM VP Q VM+E ++NH PEV+++DEIG E A ++ RGV +I
Sbjct: 539 PHPCVGMSRRMMVPSLRDQASVMVECLQNHTPEVMVIDEIGRGREVEAAQTSKNRGVRMI 598
Query: 134 GTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARR-------CQKSILERKAPPTFY 186
+AHG+ L +++KN L LIGG+ T T+GD EAR + QK + +R A P F
Sbjct: 599 ASAHGD-LRSLMKNRELRGLIGGLATTTVGDMEARRMQKKTGGEILQKQVTQRAAAPIFE 657
Query: 187 FLIEMRE---RHYWVTHKTEKSVDMLLRGKTPLVEIRKR 222
+IE+R + + +VD +L+GKT V+ R R
Sbjct: 658 TIIELRRGRLNEWHIIPDVATAVDAVLKGKTYDVQKRIR 696
>gi|154341757|ref|XP_001566830.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064155|emb|CAM40352.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 551
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 119/182 (65%), Gaps = 7/182 (3%)
Query: 34 RPGVGKTTVMREIARVLS-DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 92
+ G+GKTT++R++A L+ D RV +VDTSNEIGGDG IP +G RR+QVP Q
Sbjct: 240 KAGMGKTTLLRDLAAGLAQDPLTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVPRREDQ 299
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
+VMIE ++NH P+ +IVDEI TE EA A SI++RGV +IGT HGE LE +++N L+
Sbjct: 300 SRVMIEVIQNHTPDYLIVDEIATEEEAEAAWSISQRGVHMIGTCHGEHLEGLLQNRALNL 359
Query: 153 LIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSVDM 208
L+GG L +EE R R + +K++LER F F++E+ R H +V K+VD+
Sbjct: 360 LVGGAAQAFLSNEERRLRNKTKKTVLERPYNSPFSFVVELHARNRAHLYV--DVNKAVDL 417
Query: 209 LL 210
L
Sbjct: 418 AL 419
>gi|390337535|ref|XP_784840.3| PREDICTED: uncharacterized protein ycf45-like [Strongylocentrotus
purpuratus]
Length = 441
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 114/188 (60%), Gaps = 8/188 (4%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 95
GVGKTT++RE ARVLSD +K V+I+DT +EI G+GDIPH +IG+ARR+QV E +LQHKV
Sbjct: 229 GVGKTTLLREAARVLSDVEKKNVMIIDTLSEIAGEGDIPHQSIGSARRLQVIESNLQHKV 288
Query: 96 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIG 155
M E +NH PE++I+DEI + EA + RG+ LI G+ L +++ N L+ + G
Sbjct: 289 MSEVYQNHRPEIVIIDEISSLEEAEKTLDMKLRGIQLIAGVQGKTLADVLLNTALTPITG 348
Query: 156 GVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKT 214
G+ ++G R R P F L+EM + W+ H + ++D +L G
Sbjct: 349 GIKE-SVGYPGGVPGRL------RTGPVVFDVLVEMLDMERWIIHWDFQWAIDAVLPGGR 401
Query: 215 PLVEIRKR 222
+E+ +R
Sbjct: 402 RTLEVEER 409
>gi|218297092|ref|ZP_03497763.1| AAA ATPase [Thermus aquaticus Y51MC23]
gi|218242506|gb|EED09044.1| AAA ATPase [Thermus aquaticus Y51MC23]
Length = 319
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/184 (39%), Positives = 116/184 (63%), Gaps = 18/184 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSL--Q 92
P GKTT++R++ R+L++ + RV++VDTSNEIGGDG IPH I ARRMQVP+P Q
Sbjct: 135 PRTGKTTLLRDVVRILAERWGSRVLVVDTSNEIGGDGLIPHPGIRPARRMQVPDPPAKTQ 194
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
+++ +A+ NH PE+++VDEIG + + C + + RGV ++ TAHGE L ++++NP L
Sbjct: 195 GRIIYQAIANHSPEIVVVDEIGYNEDVYECLTASRRGVRVVATAHGEKLLDVLENPALHP 254
Query: 153 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLR 211
+ LGD + +AR ER++ P+F +++ + +V + K++D LL
Sbjct: 255 V--------LGDPDLKAR-------ERRSRPSFQMALQVVGKGRFVLYPDLAKALDELLE 299
Query: 212 GKTP 215
G P
Sbjct: 300 GNEP 303
>gi|348667954|gb|EGZ07779.1| hypothetical protein PHYSODRAFT_529044 [Phytophthora sojae]
Length = 460
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 124/234 (52%), Gaps = 22/234 (9%)
Query: 7 VFLLIVKFFYALYSINKIIFDFFLS----------YFRPGVGKTTVMREIARVLSDEFQK 56
V+ L ++ AL + ++ D LS PG GKTT++R++AR +S E +
Sbjct: 220 VYGLTMRVGRALRNAACVLTDLLLSARHADKSVLVLGHPGSGKTTLIRDVARCVS-ETME 278
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
V I+DTSNEIGGDG +PH +G ARRM V Q VM+E V+NH E +IVDEIG
Sbjct: 279 NVCIIDTSNEIGGDGLVPHECVGWARRMMVRSLEAQAGVMVECVQNHTVETLIVDEIGRR 338
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
AE A ++ +RG LI +AHG++ ++KNP L L+GG V +GD A + +
Sbjct: 339 AEVLAASTVRQRGPRLIASAHGDF-RALLKNPDLKGLVGGSQQVIVGDSAAAQSASKSKL 397
Query: 177 -LERKAPPTFYFLIEM------RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRD 223
+R P F ++E+ R R W K+VD + G E R+ D
Sbjct: 398 QTQRAGNPIFDVIVELDHVVRGRCRVIW---DVAKAVDSVFEGNGYAFETRQWD 448
>gi|342181564|emb|CCC91044.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 539
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/182 (44%), Positives = 118/182 (64%), Gaps = 7/182 (3%)
Query: 34 RPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 92
+ GVGKTT++R++A LS E + RV+++DTSNEIGGD + +G RR+QVP Q
Sbjct: 256 KAGVGKTTILRDLAASLSREPSRPRVMVIDTSNEIGGDSPVALPFLGRCRRVQVPRREAQ 315
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
+VM + ++NH PE +IVDEI + AEA A SI++RGV LI T HGE L +++N L+
Sbjct: 316 QEVMRQVLQNHSPEYMIVDEITSAAEAEAAWSISQRGVHLIATCHGENLAGLLQNRSLNI 375
Query: 153 LIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSVDM 208
L+GGV L +EE R R + +K++LER F+F++E+ R H +V ++VD
Sbjct: 376 LVGGVAQAFLSNEERRLRNKVKKTVLERPNSSPFHFVVELTSRKCAHLYV--DVNEAVDC 433
Query: 209 LL 210
LL
Sbjct: 434 LL 435
>gi|72390323|ref|XP_845456.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359508|gb|AAX79944.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801991|gb|AAZ11897.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 470
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 116/182 (63%), Gaps = 7/182 (3%)
Query: 34 RPGVGKTTVMREIARVLS-DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 92
+ G+GKTT++R++A LS D + RV++VDTSNEIGGD +P +G RR+QVP Q
Sbjct: 194 KAGMGKTTILRDLAASLSRDPAKPRVMVVDTSNEIGGDSPMPLPFLGRCRRIQVPRREEQ 253
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
+VM + ++NH PE +IVDE+ T AEA SI++RGV L+ T HGE L +++N L+
Sbjct: 254 QEVMKQILQNHSPEYVIVDEVSTTAEAEVTWSISQRGVHLVATCHGESLAGLLQNQSLNL 313
Query: 153 LIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSVDM 208
L+GG L +EE R R + +K+ILER F F++E+ R H +V ++VD
Sbjct: 314 LVGGTAHAFLSNEERRLRNKIKKTILERPHSSPFKFVVELHSRKFAHLYV--DVNQAVDC 371
Query: 209 LL 210
LL
Sbjct: 372 LL 373
>gi|261328858|emb|CBH11836.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 531
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 116/182 (63%), Gaps = 7/182 (3%)
Query: 34 RPGVGKTTVMREIARVLS-DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 92
+ G+GKTT++R++A LS D + RV++VDTSNEIGGD +P +G RR+QVP Q
Sbjct: 255 KAGMGKTTILRDLAASLSRDPAKPRVMVVDTSNEIGGDSPMPLPFLGRCRRIQVPRREEQ 314
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
+VM + ++NH PE +IVDE+ T AEA SI++RGV L+ T HGE L +++N L+
Sbjct: 315 QEVMKQILQNHSPEYVIVDEVSTTAEAEVTWSISQRGVHLVATCHGESLAGLLQNQSLNL 374
Query: 153 LIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSVDM 208
L+GG L +EE R R + +K+ILER F F++E+ R H +V ++VD
Sbjct: 375 LVGGTAHAFLSNEERRLRNKIKKTILERPHSSPFKFVVELHSRKFAHLYV--DVNQAVDC 432
Query: 209 LL 210
LL
Sbjct: 433 LL 434
>gi|348667950|gb|EGZ07775.1| hypothetical protein PHYSODRAFT_529219 [Phytophthora sojae]
Length = 397
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/234 (36%), Positives = 123/234 (52%), Gaps = 22/234 (9%)
Query: 7 VFLLIVKFFYALYSINKIIFDFFLS----------YFRPGVGKTTVMREIARVLSDEFQK 56
V+ L ++ AL + ++ D LS G GKTT++R++AR +S E +
Sbjct: 158 VYGLTMRVGRALRNAACVLTDLLLSARHADKSVLVLGHSGSGKTTLIRDVARCVS-ETME 216
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
V I+DTSNEIGGDG +PH +G ARRM V Q VM+E V+NH E +IVDEIG
Sbjct: 217 NVCIIDTSNEIGGDGLVPHECVGWARRMMVRSLEAQAGVMVECVQNHTVETLIVDEIGRR 276
Query: 117 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 176
AE A ++ +RG LI +AHG++ ++KNP L L+GG V +GD A + +
Sbjct: 277 AEVLAASTVRQRGPRLIASAHGDF-RALLKNPDLKGLVGGSQQVIVGDSAAAQSASKSKL 335
Query: 177 -LERKAPPTFYFLIEM------RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRD 223
+R P F ++E+ R R W K+VD + G E R+ D
Sbjct: 336 QTQRAGNPIFDVIVELDHVVRGRCRVIW---DVAKAVDSVFEGNGYAFETRQWD 386
>gi|407416930|gb|EKF37845.1| hypothetical protein MOQ_001953 [Trypanosoma cruzi marinkellei]
Length = 539
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 12/209 (5%)
Query: 34 RPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 92
+ G+GKTT++R++A LS E K RV++VDTSNEIGGD IP +G RR+QV Q
Sbjct: 255 KAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGRCRRVQVSRREDQ 314
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
++M + ++NH PE ++VDEI T +EA A S+ +RGV LI T HGE L +++N L+
Sbjct: 315 GQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGENLHGLLQNQSLNL 374
Query: 153 LIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRERH-YWVTHKTEKSVDMLL 210
L+GG L +EE R R + +K+ILER F F++E+ R+ V +VD+LL
Sbjct: 375 LVGGAAQAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHVYTDVNTAVDLLL 434
Query: 211 RGKTPLVEIRKRDDRFNVVVDRWKTYDRH 239
+D + N V + DRH
Sbjct: 435 ---------DDQDAKQNASVGQTVVLDRH 454
>gi|71422331|ref|XP_812102.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70876843|gb|EAN90251.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 539
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 12/209 (5%)
Query: 34 RPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 92
+ G+GKTT++R++A LS E K RV++VDTSNEIGGD IP +G RR+QV Q
Sbjct: 255 KAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGRCRRVQVSRREDQ 314
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
++M + ++NH PE ++VDEI T +EA A S+ +RGV LI T HGE L +++N L+
Sbjct: 315 GQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGENLHGLLQNQSLNL 374
Query: 153 LIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRERH-YWVTHKTEKSVDMLL 210
L+GG L +EE R R + +K+ILER F F++E+ R+ V +VD+LL
Sbjct: 375 LVGGAAQAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHVYTDVNTAVDLLL 434
Query: 211 RGKTPLVEIRKRDDRFNVVVDRWKTYDRH 239
+D + N V + DRH
Sbjct: 435 ---------DDQDAKQNASVGQTVVLDRH 454
>gi|71420679|ref|XP_811568.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70876244|gb|EAN89717.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 539
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 12/209 (5%)
Query: 34 RPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 92
+ G+GKTT++R++A LS E K RV++VDTSNEIGGD IP +G RR+QV Q
Sbjct: 255 KAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGRCRRVQVSRREDQ 314
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
++M + ++NH PE ++VDEI T +EA A S+ +RGV LI T HGE L +++N L+
Sbjct: 315 GQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGENLHGLLQNQSLNL 374
Query: 153 LIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRERH-YWVTHKTEKSVDMLL 210
L+GG L +EE R R + +K+ILER F F++E+ R+ V +VD+LL
Sbjct: 375 LVGGAAQAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHVYTDVNTAVDLLL 434
Query: 211 RGKTPLVEIRKRDDRFNVVVDRWKTYDRH 239
+D + N V + DRH
Sbjct: 435 ---------DDQDAKQNASVGQTVVLDRH 454
>gi|407852006|gb|EKG05683.1| hypothetical protein TCSYLVIO_003242 [Trypanosoma cruzi]
Length = 539
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 123/209 (58%), Gaps = 12/209 (5%)
Query: 34 RPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 92
+ G+GKTT++R++A LS E K RV++VDTSNEIGGD IP +G RR+QV Q
Sbjct: 255 KAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGRCRRVQVSRREDQ 314
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
++M + ++NH PE ++VDEI T +EA A S+ +RGV LI T HGE L +++N L+
Sbjct: 315 GQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGENLHGLLQNQSLNL 374
Query: 153 LIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRERH-YWVTHKTEKSVDMLL 210
L+GG L +EE R R + +K+ILER F F++E+ R+ V +VD+LL
Sbjct: 375 LVGGAAHAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHVYTDVNTAVDLLL 434
Query: 211 RGKTPLVEIRKRDDRFNVVVDRWKTYDRH 239
+D + N V + DRH
Sbjct: 435 ---------DDQDAKQNASVGQTVVLDRH 454
>gi|384432170|ref|YP_005641529.1| AAA ATPase [Thermus thermophilus SG0.5JP17-16]
gi|333967638|gb|AEG34402.1| AAA ATPase [Thermus thermophilus SG0.5JP17-16]
Length = 310
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 111/184 (60%), Gaps = 18/184 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSL--Q 92
P GKTT++R+I R+L++ + RVV+VDTSNEIGGDG H I ARRMQVP+P Q
Sbjct: 135 PRTGKTTLLRDIVRILAERWGPRVVVVDTSNEIGGDGLTAHPGIRPARRMQVPDPPSRNQ 194
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
+++ +A+ NH PEV++VDEIG + C + + RGV ++ TAHGE L ++++NP L
Sbjct: 195 GRIIYQAIANHSPEVVVVDEIGYNEDVQECLTASRRGVRVVATAHGERLLDVLENPALHP 254
Query: 153 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLR 211
++G D +E R R+ P+F +++ + Y V +++D LL+
Sbjct: 255 VLGEPDL-----KEGR----------RRTRPSFGTALQVVAKGRYLVYPDLAQALDDLLQ 299
Query: 212 GKTP 215
G+ P
Sbjct: 300 GREP 303
>gi|297564982|ref|YP_003683954.1| AAA ATPase [Meiothermus silvanus DSM 9946]
gi|296849431|gb|ADH62446.1| AAA ATPase [Meiothermus silvanus DSM 9946]
Length = 322
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 109/184 (59%), Gaps = 20/184 (10%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
P GKTT++R+I R+L+ + RV +VDTSNEIGGDG + H I ARR+QVP+P +++
Sbjct: 147 PRTGKTTLLRDIVRILAGRYGPRVAVVDTSNEIGGDGKLTHPGISPARRLQVPDPPSKNQ 206
Query: 95 --VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
V+ +A+ NH PEV++ DEIG + C + + RGV ++ TAHGE + ++++NP+L
Sbjct: 207 GWVIYQAIANHSPEVVVADEIGYNEDVFQCLTASRRGVRVVATAHGETILDLLENPVLLP 266
Query: 153 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLR 211
+ LGD RR + P+F +E+R + +V + +++D LL
Sbjct: 267 I--------LGDPGEGRRRSR---------PSFAMCLEVRGKGKFVLYPDFAEALDTLLT 309
Query: 212 GKTP 215
G P
Sbjct: 310 GGEP 313
>gi|291294925|ref|YP_003506323.1| AAA ATPase [Meiothermus ruber DSM 1279]
gi|290469884|gb|ADD27303.1| AAA ATPase [Meiothermus ruber DSM 1279]
Length = 318
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 109/184 (59%), Gaps = 20/184 (10%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
P GKTT++R+I R+L+ + RV +VDTSNEIGGDG + H I ARR+QVP+P +++
Sbjct: 143 PRTGKTTLLRDIVRILAGRYGPRVAVVDTSNEIGGDGKLTHPGISPARRLQVPDPPSKNQ 202
Query: 95 --VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
V+ +A+ NH PEV++ DEIG + C + + RGV ++ TAHGE + ++++NP+L
Sbjct: 203 GWVIYQAIANHSPEVVVADEIGYNEDVFQCLTASRRGVRVVATAHGETILDLLENPVLLP 262
Query: 153 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLR 211
+ LGD RR + P+F +E+R + +V + +++D LL
Sbjct: 263 I--------LGDPVEGKRRSR---------PSFAMCLEVRGKGKFVLYPDFAEALDTLLA 305
Query: 212 GKTP 215
G P
Sbjct: 306 GGEP 309
>gi|386361866|ref|YP_006061707.1| hypothetical protein [Thermus thermophilus JL-18]
gi|383510893|gb|AFH40323.1| hypothetical protein TtJL18_2503 [Thermus thermophilus JL-18]
Length = 310
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 110/184 (59%), Gaps = 18/184 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSL--Q 92
P GKTT++R+I R+L++++ RVV+VDTSNEIGGDG H I ARRMQVP+P Q
Sbjct: 135 PRTGKTTLLRDIVRILAEKWGPRVVVVDTSNEIGGDGLTAHPGIRPARRMQVPDPPSRNQ 194
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
+++ +A+ NH PEV++VDEIG + C + + RGV ++ TAHGE L + ++NP L
Sbjct: 195 GRIIYQAIANHSPEVVVVDEIGYNEDVQECLTASRRGVRVVATAHGERLLDALENPALHP 254
Query: 153 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLR 211
++G D E R R+ P+F +++ + Y V +++D LL+
Sbjct: 255 VLGEPDL-----REGR----------RRTRPSFGTALQVVAKGRYLVYPDLAQALDDLLQ 299
Query: 212 GKTP 215
G+ P
Sbjct: 300 GREP 303
>gi|339898849|ref|XP_001467056.2| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321398540|emb|CAM70107.2| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 551
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 119/182 (65%), Gaps = 7/182 (3%)
Query: 34 RPGVGKTTVMREIARVLSDE-FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 92
+ G+GKTT++R++A L+ E RV +VDTSNEIGGDG IP +G RR+QV Q
Sbjct: 240 KAGMGKTTLLRDLAAALAQEPGTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVARREDQ 299
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
+VM+E ++NH PE +IVDEI TE EA A SI++RGV LIGT HGE LE +++N L+
Sbjct: 300 GRVMMEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQNRALNL 359
Query: 153 LIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSVDM 208
L+GG L +EE R R + +K++LER F FL+E+ R H +V K+VD+
Sbjct: 360 LVGGAAQAFLSNEERRLRNKTKKTVLERPYSSPFSFLVELHARNRGHLYV--DVNKAVDL 417
Query: 209 LL 210
+L
Sbjct: 418 VL 419
>gi|398019514|ref|XP_003862921.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501152|emb|CBZ36230.1| hypothetical protein, conserved [Leishmania donovani]
Length = 551
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/182 (47%), Positives = 119/182 (65%), Gaps = 7/182 (3%)
Query: 34 RPGVGKTTVMREIARVLSDE-FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 92
+ G+GKTT++R++A L+ E RV +VDTSNEIGGDG IP +G RR+QV Q
Sbjct: 240 KAGMGKTTLLRDLAAALAQEPGTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVARREDQ 299
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
+VM+E ++NH PE +IVDEI TE EA A SI++RGV LIGT HGE LE +++N L+
Sbjct: 300 GRVMMEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQNRALNL 359
Query: 153 LIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSVDM 208
L+GG L +EE R R + +K++LER F FL+E+ R H +V K+VD+
Sbjct: 360 LVGGAAQAFLSNEERRLRNKTKKTVLERPYSSPFSFLVELHARNRGHLYV--DVNKAVDL 417
Query: 209 LL 210
+L
Sbjct: 418 VL 419
>gi|157872545|ref|XP_001684813.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127883|emb|CAJ06408.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 551
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 120/182 (65%), Gaps = 7/182 (3%)
Query: 34 RPGVGKTTVMREIARVLSDE-FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 92
+ G+GKTT++R++A L+ E RV +VDTSNEIGGDG IP +G RR+QV + Q
Sbjct: 240 KAGMGKTTLLRDLAAALAQEPGTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVAQRQDQ 299
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
+VM+E ++NH PE +IVDEI TE EA A SI++RGV LIGT HGE LE +++N L+
Sbjct: 300 GRVMMEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQNRALNL 359
Query: 153 LIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSVDM 208
L+GG L +EE R R + +K++LER F F++E+ R H +V K+VD+
Sbjct: 360 LVGGAAQAFLSNEERRLRNKMKKTVLERPYSSPFSFVVELHARNLGHLYV--DVNKAVDL 417
Query: 209 LL 210
+L
Sbjct: 418 VL 419
>gi|401425735|ref|XP_003877352.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493597|emb|CBZ28886.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 550
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/182 (46%), Positives = 119/182 (65%), Gaps = 7/182 (3%)
Query: 34 RPGVGKTTVMREIARVLSDE-FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 92
+ G+GKTT++R++A L+ E RV +VDTSNEIGGDG IP +G RR+QV Q
Sbjct: 240 KAGMGKTTLLRDLAAALAQEPGAPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVARREDQ 299
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
+VM+E ++NH PE +IVDEI TE EA A SI++RGV LIGT HGE LE +++N L+
Sbjct: 300 GRVMMEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQNRALNL 359
Query: 153 LIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSVDM 208
L+GG L +EE R R + +K++LER F F++E+ R H +V K+VD+
Sbjct: 360 LVGGAAQAFLSNEERRLRNKTRKTVLERPYSSPFSFVVELHGRSRGHLYV--DVNKAVDL 417
Query: 209 LL 210
+L
Sbjct: 418 VL 419
>gi|297567949|ref|YP_003686919.1| AAA ATPase [Meiothermus silvanus DSM 9946]
gi|296852398|gb|ADH65411.1| AAA ATPase [Meiothermus silvanus DSM 9946]
Length = 386
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 107/191 (56%), Gaps = 25/191 (13%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS---- 90
PGVGKTT +R++ R + + +VV+VDTSNEIGG+G +PH +G+ARR+QVP P+
Sbjct: 135 PGVGKTTFLRDVVRQYAQQIGPKVVVVDTSNEIGGEGLVPHPTLGSARRLQVPTPNYAIG 194
Query: 91 -----LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
+ + +EA+ NH P+VI+ DE+G + +I +RG+ I T HG L +++
Sbjct: 195 ETFQMMLARTYLEALANHGPQVIVGDEVGYPEDVAVVETIGKRGIKGIVTVHGRTLRDVL 254
Query: 146 KNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEK 204
+NP+L LIG D ARR R+ P F +E+R + + V
Sbjct: 255 ENPVLWPLIGRPDL--------PARR-------RQGRPVFSMALEVRGKGRFAVYPDLAG 299
Query: 205 SVDMLLRGKTP 215
++D LL+G P
Sbjct: 300 AIDTLLQGGQP 310
>gi|320450693|ref|YP_004202789.1| AAA ATPase [Thermus scotoductus SA-01]
gi|320150862|gb|ADW22240.1| AAA ATPase [Thermus scotoductus SA-01]
Length = 316
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/124 (46%), Positives = 82/124 (66%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKTT++R I + + R+VIVDTSNEI GDG +PH IG+ARRM V +P Q
Sbjct: 140 PGVGKTTLLRGIVEEKAKVLKARLVIVDTSNEIAGDGTVPHPIIGSARRMMVGDPRKQAS 199
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
++++A+ NH PE I+VDEIG + + RGV ++ T HGE L ++++NP+L L+
Sbjct: 200 IIMQAITNHSPETIVVDEIGYHDDVAVLETARRRGVDIVATVHGEDLIDVLENPVLKPLL 259
Query: 155 GGVD 158
G D
Sbjct: 260 GYPD 263
>gi|308805324|ref|XP_003079974.1| sporulation protein-related (ISS) [Ostreococcus tauri]
gi|116058431|emb|CAL53620.1| sporulation protein-related (ISS), partial [Ostreococcus tauri]
Length = 173
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 59/85 (69%)
Query: 153 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRG 212
L+GGV TVTLGD+EARAR CQKSILER+ PPTF LIEM ER WV H +SVD +L G
Sbjct: 2 LVGGVQTVTLGDDEARARGCQKSILERQGPPTFPILIEMHERDMWVAHNVAESVDEVLSG 61
Query: 213 KTPLVEIRKRDDRFNVVVDRWKTYD 237
P+V++R R+ + N V YD
Sbjct: 62 ARPVVQLRTRNAQTNEVSVHRTVYD 86
>gi|260804927|ref|XP_002597339.1| hypothetical protein BRAFLDRAFT_66476 [Branchiostoma floridae]
gi|229282602|gb|EEN53351.1| hypothetical protein BRAFLDRAFT_66476 [Branchiostoma floridae]
Length = 2613
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 57/151 (37%), Positives = 81/151 (53%), Gaps = 8/151 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
P G+TT++RE ARVLSD +RV++VDT EI G DIPH IG ARR+QV Q
Sbjct: 2414 PCSGRTTLLREWARVLSDVCYRRVIVVDTLKEIAGGDDIPHPGIGGARRVQVHNRCDQVS 2473
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
+ A NH P+ IIVDE+ T+ E A ++I G+ ++ L ++++N ++ L+
Sbjct: 2474 QLQTAARNHSPDCIIVDEVQTQEEVTALQAIRLTGIQVVAGVCAGCLTDLLQNSVMRGLL 2533
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTF 185
G DT + Q PPTF
Sbjct: 2534 GLSDTASTFP--------QTPSTSESVPPTF 2556
Score = 94.0 bits (232), Expect = 5e-17, Method: Composition-based stats.
Identities = 48/92 (52%), Positives = 60/92 (65%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RP GKTT++RE ARVLSD +RV++VDT NEI G DIPH IG ARR+QV Q
Sbjct: 1560 RPCSGKTTLLREWARVLSDVCYRRVIVVDTRNEIAGGDDIPHPGIGGARRVQVHNRCDQV 1619
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
+ A NH P+ IIVDE+ T+ E A ++I
Sbjct: 1620 FQLQTAARNHSPDCIIVDEVQTQEEVTALQAI 1651
>gi|313667305|ref|YP_004049706.1| AAA ATPase central domain protein [Oceanithermus profundus DSM
14977]
gi|313153936|gb|ADR37786.1| AAA ATPase central domain protein [Oceanithermus profundus DSM
14977]
Length = 345
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PG GKTT++R +A +D + I+DTSNEIGG G+ P + AR QVP P+ Q +
Sbjct: 137 PGSGKTTLLRAVAAAFADAIGPHLNIIDTSNEIGGVGETPIHELRHARWHQVPNPAKQPE 196
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
V+ A+ NH P V+I+DE+G + + A RGV +I T HG + ++I+N S L+
Sbjct: 197 VIRRAIANHGPLVLILDEVGYHGDVPEVEAAARRGVQVIATVHGYGIFDVIENAHYSPLL 256
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM 191
G D L AR +S+LE +A FY+L ++
Sbjct: 257 GHPD---LNSRVRLARPAFQSLLEVRAKGKFYWLPDL 290
>gi|260804935|ref|XP_002597343.1| hypothetical protein BRAFLDRAFT_66479 [Branchiostoma floridae]
gi|229282606|gb|EEN53355.1| hypothetical protein BRAFLDRAFT_66479 [Branchiostoma floridae]
Length = 3045
Score = 97.4 bits (241), Expect = 5e-18, Method: Composition-based stats.
Identities = 64/191 (33%), Positives = 93/191 (48%), Gaps = 3/191 (1%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RP GKTT++RE ARVLSD +RV++VDT EI G DI H IG ARR+QV Q
Sbjct: 2846 RPCSGKTTLLREWARVLSDVCYRRVIVVDTLKEIAGGDDITHPGIGGARRVQVHNRCDQV 2905
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+ A NH P+ IIVDE+ T+ E A ++I G+ ++ L +++ N ++ L
Sbjct: 2906 FQLQTAARNHSPDFIIVDEVQTQEEVTALQAIRLTGIQVVAGVCAGCLPDLLHNSVMRGL 2965
Query: 154 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDM--LLR 211
+G D + + + P F + + R + S LL
Sbjct: 2966 LGLSDPASTFPQTPSTSESVPPAFPQTL-PVFQAAVVIHSRDMVSVYSDVASFVRVSLLE 3024
Query: 212 GKTPLVEIRKR 222
G+ PL + RKR
Sbjct: 3025 GRFPLAQQRKR 3035
>gi|397565678|gb|EJK44725.1| hypothetical protein THAOC_36714 [Thalassiosira oceanica]
Length = 579
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 86/143 (60%), Gaps = 11/143 (7%)
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
S Q +VMIE V+NH P V+++DEIG E A ++ RGV +I +AHG+ L +++KN
Sbjct: 424 SKQSEVMIECVQNHTPSVMVIDEIGRRNEVEAAQTSKNRGVRMIASAHGD-LRSLLKNKE 482
Query: 150 LSDLIGGVDTVTLGDEEAR-------ARRCQKSILERKAPPTFYFLIEM---RERHYWVT 199
+ LIGG++T TLGD EA+ ++ +K++ R A P F +IE+ R + +
Sbjct: 483 IRGLIGGLETTTLGDVEAKELQKKTGSKTLEKTLTTRAAAPIFEVIIELKRGRLNEWHIV 542
Query: 200 HKTEKSVDMLLRGKTPLVEIRKR 222
+ K+VD +LRG+ V+ R R
Sbjct: 543 SDSTKAVDAILRGEKYHVQKRMR 565
>gi|298714683|emb|CBJ27608.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 354
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 105/191 (54%), Gaps = 15/191 (7%)
Query: 29 FLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHS-AIGT-ARRMQV 86
L R G GKTT++R++ R LS + VVIVDT ++IGG G +PH AIG +RR+ V
Sbjct: 114 ILVLGRHGAGKTTLVRDMCRKLSS--HETVVIVDTRSDIGGAGVVPHRRAIGEESRRVMV 171
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
P+ QH+V+++A NH P+ I+VDEI ++ + AC ++ RG+ ++ A G+ L ++
Sbjct: 172 PQGMQQHEVILQAYRNHSPQTIVVDEISSQLDIEACMAVKARGIRVVAGAVGD-LPYVLD 230
Query: 147 NPILSDLIGGVDTVTLGDEEARARRCQKSILERKA-PPTFYFLIEMRER------HYWVT 199
+P + +GG++ + A +ER+A P F ++E+ R V
Sbjct: 231 SPEIGAALGGLEDIQ---RSANVDDDSDDQMERRAGSPVFEAVVELEGRAGGAAPQGAVV 287
Query: 200 HKTEKSVDMLL 210
E VD LL
Sbjct: 288 TNVEAVVDELL 298
>gi|158421474|ref|YP_001527701.1| AAA ATPase [Deinococcus geothermalis DSM 11300]
gi|158342717|gb|ABW35003.1| AAA ATPase [Deinococcus geothermalis DSM 11300]
Length = 322
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 97/182 (53%), Gaps = 13/182 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
P VGKTT++R+I R+ ++ +V++D+SNEI GDGD+PH + RR +V +P Q
Sbjct: 134 PAVGKTTLLRDITRIRAEVKSSGLVVIDSSNEITGDGDVPHPMLSRVRRFKVGDPEQQAP 193
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
+ A+ NH PE I++DE+G + S GV +I T HG ++++++NP L L+
Sbjct: 194 KLRRAIRNHGPEEILMDEVGYNGDVPLLVSAVRLGVTVIATMHGRVVKDVLRNPPLLPLL 253
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSV-DMLLRGK 213
G G+ RA C F IE+ + ++ H+ ++V LL G+
Sbjct: 254 GVAIDERTGELIKRADTC------------FGMAIEVHGKGKYLVHEDLEAVTQALLCGE 301
Query: 214 TP 215
P
Sbjct: 302 EP 303
>gi|325284450|ref|YP_004256990.1| AAA ATPase [Deinococcus proteolyticus MRP]
gi|324316514|gb|ADY27627.1| AAA ATPase [Deinococcus proteolyticus MRP]
Length = 316
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 92/181 (50%), Gaps = 19/181 (10%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
P VGKTT++R+IAR++++ + +VI+DTSNEI GD DIPH IG AR + V P Q +
Sbjct: 144 PAVGKTTLLRDIARIMAERLAQGLVIIDTSNEIAGDSDIPHRIIGKARVVAVGNPLHQGE 203
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
+ N P+ ++ DEIG + R A RGV + T HG+ + ++ + L L+
Sbjct: 204 KFARVIGNMGPQALLSDEIGYRDDIPIIRQNAPRGVSITATLHGKNMVRVVNSENLWPLL 263
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
G + ++ P F IE+ R + H+ + S++ +L GK
Sbjct: 264 GVIGR------------------QKVEPSVFAQAIEVIGRGRYRVHEDFDASIEAILAGK 305
Query: 214 T 214
Sbjct: 306 N 306
>gi|386854327|ref|YP_006258707.1| AAA ATPase [Deinococcus gobiensis I-0]
gi|380002656|gb|AFD27843.1| AAA ATPase [Deinococcus gobiensis I-0]
Length = 314
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 92/188 (48%), Gaps = 19/188 (10%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
P GKTT++R+IAR+L++ +VI+DTSNEI GD D H +G ARR+ V P Q +
Sbjct: 142 PAAGKTTLLRDIARILAERLGSGLVIIDTSNEIAGDSDHKHPIVGQARRVPVGNPLWQGE 201
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
A+ N P+ ++ DEIG + A RGV + T HG+ + + + L ++
Sbjct: 202 KFARAIGNMGPKALLSDEIGYRDDIPVIAMNAPRGVSVTATLHGKNMRRVAHSQNLWPIL 261
Query: 155 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 213
G D V + P F IE+ R ++ H+ + S+ LL G+
Sbjct: 262 GIKDGV------------------KTEPAVFKIAIEVPRRGFFRVHEDFDASLKSLLAGE 303
Query: 214 TPLVEIRK 221
P IR+
Sbjct: 304 EPTEGIRE 311
>gi|326516068|dbj|BAJ88057.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 160
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/60 (70%), Positives = 51/60 (85%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 95
GV KT V+REIAR+L+D++ KRV+IVDTSNEI GDGDIPH IG ARR+QVP+ +QHKV
Sbjct: 66 GVWKTIVIREIARMLADDYDKRVMIVDTSNEIAGDGDIPHPGIGNARRLQVPDQEMQHKV 125
>gi|20807732|ref|NP_622903.1| stage III sporulation protein spoIIIAA [Thermoanaerobacter
tengcongensis MB4]
gi|254479690|ref|ZP_05092986.1| stage III sporulation protein AA [Carboxydibrachium pacificum DSM
12653]
gi|20516285|gb|AAM24507.1| stage III sporulation protein spoIIIAA [Thermoanaerobacter
tengcongensis MB4]
gi|214034376|gb|EEB75154.1| stage III sporulation protein AA [Carboxydibrachium pacificum DSM
12653]
Length = 330
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 73/127 (57%), Gaps = 7/127 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R+IAR LSD F K+V I+D +EI G +P +G R V +
Sbjct: 165 PQCGKTTLLRDIARALSDGFMGFGGKKVCIIDERSEIAGCYNGVPQLNVGI--RTDVLDR 222
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + MI A+ + P+V++ DEIG + + A R + GV +I T H + +E++ K P+
Sbjct: 223 CPKAEGMIMAIRSMSPQVVVTDEIGKKEDIEALRHVLNAGVKIITTVHAKDIEDLKKRPL 282
Query: 150 LSDLIGG 156
L DL+ G
Sbjct: 283 LKDLVEG 289
>gi|323452315|gb|EGB08189.1| hypothetical protein AURANDRAFT_71632 [Aureococcus anophagefferens]
Length = 1677
Score = 77.4 bits (189), Expect = 5e-12, Method: Composition-based stats.
Identities = 59/183 (32%), Positives = 92/183 (50%), Gaps = 27/183 (14%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVV------IVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
PG GK+T +R+ A L +++R +VD S E+GGDG H+++ A R
Sbjct: 603 PGAGKSTALRDAA-ALVGAYRERHAPVGDCWVVDQSLELGGDGLAAHASLRPAERYPCQG 661
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW-------- 140
+L H+ M+ + NH P I+VDE+ A A A + +RGV L+ +AH W
Sbjct: 662 EAL-HEAMLRVLRNHTPAAIVVDELVDRAAALAAADVGKRGVQLLASAHA-WEKGATSAH 719
Query: 141 ---LENIIKNPILSDLIGGVDTVTLGDEEARARRCQ------KSILERKAPPTFYFLIEM 191
L ++ + L+ ++G + VTL D EA ARR + K +R TF ++E+
Sbjct: 720 ARSLAELVDDAALAPVLGDFEIVTLSDREA-ARRAKTQRDPRKVRRQRVRNATFGCVVEL 778
Query: 192 RER 194
R R
Sbjct: 779 RPR 781
>gi|386854853|ref|YP_006262593.1| AAA ATPase [Deinococcus gobiensis I-0]
gi|380002330|gb|AFD27518.1| AAA ATPase [Deinococcus gobiensis I-0]
Length = 301
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PG GKT ++R++ R+L + R+ + D+SNEI GDG PHS R+ + +P LQ
Sbjct: 113 PGAGKTALLRDVNRILGERLAGRLFVCDSSNEILGDGIQPHSITDWLSRVPIGDPKLQLS 172
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 137
+ V+N P ++VDE+ + +A A RGV ++ T H
Sbjct: 173 KLNMVVKNFQPRWMVVDEVSSPDDARAIGYARSRGVRVVMTWH 215
>gi|260804937|ref|XP_002597344.1| hypothetical protein BRAFLDRAFT_66480 [Branchiostoma floridae]
gi|229282607|gb|EEN53356.1| hypothetical protein BRAFLDRAFT_66480 [Branchiostoma floridae]
Length = 1910
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 67/127 (52%), Gaps = 19/127 (14%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
RP GKTT++RE ARVLSD +RV++VDT NE+ H+ ++Q
Sbjct: 1736 RPCSGKTTLLREWARVLSDVCYRRVIVVDTRNEV-------HNRCDQVSQLQT------- 1781
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
A NH P+ IIVDE+ T+ E A ++I G+ ++ L ++++N ++ L
Sbjct: 1782 -----AARNHSPDCIIVDEVQTQEEVTALQAIRLTGIQVVAGVCAGCLTDLLQNSVMRGL 1836
Query: 154 IGGVDTV 160
+G D V
Sbjct: 1837 LGLSDPV 1843
>gi|410722781|ref|ZP_11362034.1| stage III sporulation protein AA [Clostridium sp. Maddingley
MBC34-26]
gi|410603777|gb|EKQ58203.1| stage III sporulation protein AA [Clostridium sp. Maddingley
MBC34-26]
Length = 306
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 73/127 (57%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 87
P GKTT++R+IAR +S+ K+VV+VD +EIG +P + +G R V
Sbjct: 147 PKCGKTTILRDIARNISNGMSILGLNGKKVVVVDERSEIGACHLGVPQTDLGL--RTDVL 204
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ L+ + +I A+ + PEV+I DEIGT+ + + GV +I T HG +E++ K
Sbjct: 205 DNCLKREGLIMAIRSLSPEVLICDEIGTQGDIESLIMAFNSGVNIITTIHGFTIEDLYKR 264
Query: 148 PILSDLI 154
+LSDL+
Sbjct: 265 KVLSDLL 271
>gi|253682298|ref|ZP_04863095.1| stage III sporulation protein AA [Clostridium botulinum D str.
1873]
gi|253562010|gb|EES91462.1| stage III sporulation protein AA [Clostridium botulinum D str.
1873]
Length = 298
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQH 93
P GKTT++R+I+R LSD +K++ IVD +EIG + +P IG R V + ++
Sbjct: 146 PKCGKTTLLRDISRNLSDA-KKKICIVDERSEIGACFEGVPQMNIGL--RTDVFDNCVKS 202
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+ +I A+ + PEVII DEIGT + + GV LI T HG +E++ + P+ ++
Sbjct: 203 QGIIMAIRSMAPEVIICDEIGTYKDMESIIMAMNSGVNLITTIHGFGIEDLYRRPVFKEI 262
Query: 154 I 154
+
Sbjct: 263 L 263
>gi|105672147|gb|ABF74689.1| AAA [Lingulodinium polyedrum]
Length = 656
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 69/105 (65%), Gaps = 4/105 (3%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 95
G GKTTV R++AR+L++E + V++VDT+ E+GG G + HS++G ARR+ V + + QH
Sbjct: 455 GSGKTTVTRDVARLLAEE--RSVMVVDTARELGGAGVVAHSSLGLARRLLV-DSAEQHLA 511
Query: 96 MI-EAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 139
+ EA+ +H EV++VD + ++ A R E G L+ +A G+
Sbjct: 512 AVEEAILSHAAEVVVVDGMAVQSLISASRLAREHGACLVASAVGD 556
>gi|150016566|ref|YP_001308820.1| sporulation stage III, protein AA [Clostridium beijerinckii NCIMB
8052]
gi|149903031|gb|ABR33864.1| Sporulation stage III, protein AA [Clostridium beijerinckii NCIMB
8052]
Length = 306
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 86/167 (51%), Gaps = 18/167 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDEF 54
+RN+ + ++ + + + + +S ++ P GKTT++R+IAR +S
Sbjct: 107 IRNISSVNIRICREVIGCSNKVMKYIISAYKVYNTIIISPPKCGKTTILRDIARNISSGM 166
Query: 55 ------QKRVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
K+V ++D +EIG IP S +G R V + L+ + +I A+ + PEV
Sbjct: 167 PSLGIAGKKVAVIDERSEIGACYFGIPQSDLGI--RTDVLDNCLKREGLIMAIRSLSPEV 224
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
+I DEIGT+ + A GV +I T HG +E++ K +LSDL+
Sbjct: 225 LICDEIGTKGDIEALIMAFNSGVNIITTIHGFTIEDLYKRRVLSDLL 271
>gi|56964243|ref|YP_175974.1| stage III sporulation protein AA [Bacillus clausii KSM-K16]
gi|56910486|dbj|BAD65013.1| stage III sporulation protein AA [Bacillus clausii KSM-K16]
Length = 309
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 69/126 (54%), Gaps = 9/126 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTTV+R++AR++S +K +V IVD +EI G +P +G R+ V
Sbjct: 152 PQTGKTTVLRDVARIVSTGSKKNHIPSCKVGIVDERSEIAGCVAGVPQHELGV--RVDVL 209
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG E + A GV LI TAHG LE++ K
Sbjct: 210 DGCPKAEGMMMLIRSMSPDVLIVDEIGREEDVKAILEARHAGVSLIATAHGHTLEDVAKR 269
Query: 148 PILSDL 153
P+ L
Sbjct: 270 PVFKGL 275
>gi|359412675|ref|ZP_09205140.1| stage III sporulation protein AA [Clostridium sp. DL-VIII]
gi|357171559|gb|EHI99733.1| stage III sporulation protein AA [Clostridium sp. DL-VIII]
Length = 309
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 87
P GKTT++R+IAR +S+ ++VV++D +EIG +P S +G R V
Sbjct: 150 PKCGKTTILRDIARNISNGVSSLGLNGRKVVVIDERSEIGACHFGVPQSDLGI--RTDVL 207
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ L+ + +I A+ + PEV+I DEIGT+ + A GV +I T HG +E++ K
Sbjct: 208 DNCLKREGLIMAIRSLSPEVLICDEIGTKGDIEALIMAFNSGVNIITTIHGFTIEDLYKR 267
Query: 148 PILSDLI 154
+L DL+
Sbjct: 268 KVLGDLL 274
>gi|188586330|ref|YP_001917875.1| stage III sporulation protein AA [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351017|gb|ACB85287.1| stage III sporulation protein AA [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 322
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 35 PGVGKTTVMREIARVLS---DEFQK--RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 88
PG GKTT++R++ R+LS F + ++ ++D +EI G IP IG R V +
Sbjct: 155 PGCGKTTILRDLTRLLSTGNKSFDRTFKITLIDERSEISGSVRGIPQKEIGL--RTDVLD 212
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
+ K M+ AV PE+I+ DEIGT+ + +A + GV L+ + HG+ E ++K P
Sbjct: 213 GCPKAKGMMMAVRAMSPEIIVTDEIGTKEDINAVKEAMNSGVKLLLSIHGDSYETLLKRP 272
Query: 149 ILSDLI 154
+ +L+
Sbjct: 273 GIPELL 278
>gi|331269432|ref|YP_004395924.1| stage III sporulation protein AA [Clostridium botulinum BKT015925]
gi|329125982|gb|AEB75927.1| stage III sporulation protein AA [Clostridium botulinum BKT015925]
Length = 319
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQH 93
P GKTT++R+I+R LSD +K++ IVD +E+G + +P +G R V + ++
Sbjct: 167 PKCGKTTLIRDISRNLSDA-KKKICIVDERSEVGACFEGVPQMNVGL--RTDVFDNCVKS 223
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+ +I A+ + PE+I+ DEIGT + + GV LI T HG +E++ + P+ ++
Sbjct: 224 EGIIMAIRSMAPEIIVCDEIGTYKDMESIIMAMNSGVNLITTIHGFGIEDLYRRPVFKEI 283
Query: 154 I 154
+
Sbjct: 284 L 284
>gi|220931461|ref|YP_002508369.1| Sporulation stage III protein AA [Halothermothrix orenii H 168]
gi|219992771|gb|ACL69374.1| Sporulation stage III protein AA [Halothermothrix orenii H 168]
Length = 316
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 70/127 (55%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R++S+ +K +V +VD +EIGG IP + IG+ R +
Sbjct: 160 PLCGKTTLLRDIVRLISNGIKKYGIPGKKVGVVDERSEIGGAYNGIPGNRIGS--RTDLL 217
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + K + V + PEVI VDEIG E + A + GV LI TAHGE L +
Sbjct: 218 DNCPKAKGISLLVRSMSPEVIAVDEIGNEEDVIAIQEATNSGVSLIATAHGENLTTLKMR 277
Query: 148 PILSDLI 154
P ++ L+
Sbjct: 278 PAMARLM 284
>gi|365157824|ref|ZP_09354069.1| stage III sporulation protein AA [Bacillus smithii 7_3_47FAA]
gi|363622494|gb|EHL73653.1| stage III sporulation protein AA [Bacillus smithii 7_3_47FAA]
Length = 309
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 87
P GKTT++R+IARV+S + +V IVD +EI G IP + G R+ V
Sbjct: 145 PQTGKTTLLRDIARVVSTGCDQLNIPSLKVGIVDERSEIAGCMFGIPQLSFGP--RVDVL 202
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V++VDEIG E + A GV L+ T HG+ LE I K
Sbjct: 203 DACPKAEGMMMMIRSMSPDVLVVDEIGREEDRMAVLEAVNAGVKLVMTTHGDSLEEIQKR 262
Query: 148 PILSDLI 154
P+L+D++
Sbjct: 263 PLLADIV 269
>gi|429765574|ref|ZP_19297859.1| stage III sporulation protein AA [Clostridium celatum DSM 1785]
gi|429186025|gb|EKY26988.1| stage III sporulation protein AA [Clostridium celatum DSM 1785]
Length = 329
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR +S+ K+V IVD +EI G IP +G R V
Sbjct: 168 PKCGKTTILRDIARNISNGMYSLNLRGKKVTIVDERSEIAGCYNGIPQMNVGV--RTDVL 225
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ L+ MI A+ + PEV+I DEIGTE + A GV +I T HG + +I
Sbjct: 226 DNCLKRIGMIMAIRSLSPEVLICDEIGTEGDLEALNMAFNSGVNIIVTVHGNDINDIYGR 285
Query: 148 PILSDLI 154
+ LI
Sbjct: 286 EMFRKLI 292
>gi|187935302|ref|YP_001886604.1| stage III sporulation protein AA [Clostridium botulinum B str.
Eklund 17B]
gi|187723455|gb|ACD24676.1| stage III sporulation protein AA [Clostridium botulinum B str.
Eklund 17B]
Length = 306
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 86/167 (51%), Gaps = 18/167 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDEF 54
+RN+ + V+F + + I + +S R P GKTT++R+I+R +S+
Sbjct: 107 IRNISSINVRFCREVIGCSNKIMKYIVSGDRIYNTIIISPPKCGKTTILRDISRNISNGM 166
Query: 55 Q------KRVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
+ K+V ++D +EIG +P S +G R + + L+ + MI ++ + PEV
Sbjct: 167 KSLGLNGKKVSVIDERSEIGACYFGVPQSDLGI--RTDILDNCLKKEGMIMSIRSLSPEV 224
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
+I DEIGT+ + A GV +I + HG +++I K + +LI
Sbjct: 225 LICDEIGTKGDIEALIMAFNSGVNIITSIHGFTIDDIYKRKVFKELI 271
>gi|403238245|ref|ZP_10916831.1| stage III sporulation protein AA [Bacillus sp. 10403023]
Length = 307
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR++S Q + V IVD +EI G +P +++G R+ V
Sbjct: 145 PQTGKTTLLRDLARMISTGIQSKSIPAMKVGIVDERSEIAGCVKGVPQASLGP--RVDVL 202
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG E ++ A GV LI TAHG + +++K
Sbjct: 203 DACPKAEGMMMMIRSMSPDVLIVDEIGREEDSLAIMEAVNAGVSLIVTAHGHQISDLLKR 262
Query: 148 PILSDLI 154
P L +I
Sbjct: 263 PSLEKII 269
>gi|297616604|ref|YP_003701763.1| stage III sporulation protein AA [Syntrophothermus lipocalidus DSM
12680]
gi|297144441|gb|ADI01198.1| stage III sporulation protein AA [Syntrophothermus lipocalidus DSM
12680]
Length = 326
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 68/122 (55%), Gaps = 4/122 (3%)
Query: 35 PGVGKTTVMREIARVLSD-EFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQ 92
P GKTT++R++ R+ SD VV++D +EI IP +G R V + +
Sbjct: 167 PRCGKTTLLRDLTRLYSDGPANLNVVVIDERSEIAACYQGIPQLNVGN--RTDVLDGCPK 224
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
M+ AV + P +++VDEIG A+A A + GV +I TAHG LE+I + PI++
Sbjct: 225 ALGMMMAVRSLSPHLVVVDEIGRPADAEALQECVNAGVSVIATAHGTDLEDISRRPIMAG 284
Query: 153 LI 154
L+
Sbjct: 285 LL 286
>gi|212638773|ref|YP_002315293.1| stage III sporulation protein AA [Anoxybacillus flavithermus WK1]
gi|212560253|gb|ACJ33308.1| Stage III sporulation protein AA (mutants block sporulation after
engulfment) [Anoxybacillus flavithermus WK1]
Length = 313
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR++S ++V IVD +EI G IP G R+ V
Sbjct: 151 PQTGKTTLLRDIARIVSSGVTEQHIAPRKVGIVDERSEIAGCVKGIPQFTFGC--RVDVL 208
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG+EA+ A G+ L TAHG L++++K
Sbjct: 209 DACPKAEGMMMMIRSMSPDVLIVDEIGSEADCTAILEAVHAGIGLFMTAHGRHLDDLMKR 268
Query: 148 PILSDLI 154
P L +I
Sbjct: 269 PSLRPII 275
>gi|381210320|ref|ZP_09917391.1| stage III sporulation protein AA [Lentibacillus sp. Grbi]
Length = 325
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 13/150 (8%)
Query: 9 LLIVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK----RVVIVDTS 64
L ++ + Y +N +I P GKTT++R++AR++ + K +V +VD
Sbjct: 126 LPLIPYLYHNKYVNTLIIG------PPQTGKTTLIRDLARMIGSGWDKAGAHKVGVVDER 179
Query: 65 NEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
+EIGG IP +G R V + + + M+ + + PEV++VDEIG+E++ A
Sbjct: 180 SEIGGSHKGIPQHDLGV--RTDVMDACPKDEGMMMMIRSMSPEVLVVDEIGSESDVQALM 237
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDL 153
GV ++ T H LE + K P L L
Sbjct: 238 EAVNAGVAVVCTIHSSSLEALKKRPSLKPL 267
>gi|297544559|ref|YP_003676861.1| stage III sporulation protein AA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842334|gb|ADH60850.1| stage III sporulation protein AA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 332
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR +S+ K+V IVD +EI G IP +G R V
Sbjct: 165 PQCGKTTLLRDIARWISNGIDFLGFTGKKVGIVDERSEIAGCYNGIPQLDVGI--RTDVL 222
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + MI + + P+V++ DEIG + + A + GV +I T H +E+++K
Sbjct: 223 DGCPKAHGMIMLIRSMSPQVVVTDEIGRKEDIEAIHEVLNTGVKIITTVHANDIEDLMKK 282
Query: 148 PILSDLI 154
PIL D+I
Sbjct: 283 PILKDVI 289
>gi|182417972|ref|ZP_02949280.1| stage III sporulation protein AA [Clostridium butyricum 5521]
gi|237668875|ref|ZP_04528859.1| stage III sporulation protein AA [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182378143|gb|EDT75678.1| stage III sporulation protein AA [Clostridium butyricum 5521]
gi|237657223|gb|EEP54779.1| stage III sporulation protein AA [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 308
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 82/151 (54%), Gaps = 12/151 (7%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDE------FQKRVVIVDTS 64
++K+ Y+ N+I +S P GKTT++R+IAR +S+ + ++V ++D
Sbjct: 128 LIKYIYSQKE-NRIFNTIIIS--PPKCGKTTILRDIARNISNGMNSIGLYGRKVAVIDER 184
Query: 65 NEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
+EIG IP + +G R + + L+ + MI A+ + PE++I DEIGT+ + A
Sbjct: 185 SEIGACHFGIPQNDLGM--RTDILDNCLKKEGMIMAIRSLSPEILICDEIGTKGDVEALL 242
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
GV +I + HG +E++ K + +L+
Sbjct: 243 MAFNSGVNIITSIHGFTIEDLYKRKVFHELL 273
>gi|289578279|ref|YP_003476906.1| stage III sporulation protein AA [Thermoanaerobacter italicus Ab9]
gi|289527992|gb|ADD02344.1| stage III sporulation protein AA [Thermoanaerobacter italicus Ab9]
Length = 332
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR +S+ K+V IVD +EI G IP +G R V
Sbjct: 165 PQCGKTTLLRDIARWISNGIDFLGFTGKKVGIVDERSEIAGCYNGIPQLDVGI--RTDVL 222
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + MI + + P+V++ DEIG + + A + GV +I T H +E+++K
Sbjct: 223 DGCPKAHGMIMLIRSMSPQVVVTDEIGRKEDIEAIHEVLNTGVKIITTVHANDIEDLMKK 282
Query: 148 PILSDLI 154
PIL D+I
Sbjct: 283 PILKDVI 289
>gi|118444024|ref|YP_878042.1| stage III sporulation protein AA [Clostridium novyi NT]
gi|118134480|gb|ABK61524.1| stage III sporulation protein AA, SpoIIIAA [Clostridium novyi NT]
Length = 298
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQH 93
P GKTT++R+I R LS +K+V I+D +EI + +P +G R + + ++
Sbjct: 146 PKCGKTTLIRDITRNLSTA-KKKVCIIDERSEIASCFEGVPQMDVGI--RTDILDNCIKS 202
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+ +I A+ + PEVI+ DEIGT ++ + GV LI T HG +E++ + P+ +++
Sbjct: 203 QGIIMAIRSMAPEVIVCDEIGTHSDIQSIVMAMNSGVNLITTIHGFGIEDLYRRPVFNEV 262
Query: 154 I 154
+
Sbjct: 263 V 263
>gi|433444521|ref|ZP_20409393.1| stage III sporulation protein AA [Anoxybacillus flavithermus
TNO-09.006]
gi|432001549|gb|ELK22424.1| stage III sporulation protein AA [Anoxybacillus flavithermus
TNO-09.006]
Length = 307
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 70/127 (55%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR++S ++V IVD +EI G IP G R+ V
Sbjct: 145 PQTGKTTLLRDIARIVSGGVTEQHIAPRKVGIVDERSEIAGCVKGIPQFTFGC--RVDVL 202
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V++VDEIG+EA+ A GV L TAHG L++++K
Sbjct: 203 DACPKAEGMMMMIRSMSPDVLVVDEIGSEADCTAILEAVHAGVGLFMTAHGRHLDDLMKR 262
Query: 148 PILSDLI 154
P L +I
Sbjct: 263 PSLRPII 269
>gi|332981353|ref|YP_004462794.1| stage III sporulation protein AA [Mahella australiensis 50-1 BON]
gi|332699031|gb|AEE95972.1| stage III sporulation protein AA [Mahella australiensis 50-1 BON]
Length = 332
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 69/125 (55%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R+IAR LSD ++VVIVD +E+ G I + +G R V +
Sbjct: 172 PQCGKTTLLRDIARQLSDGCSACIPRKVVIVDERSELAGSYMGIAQNDVGI--RTDVLDA 229
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ ++ A+ P+VI+ DEIG + + +A G++++ +AHG+ + +I PI
Sbjct: 230 CPKAAGIMMAIRAMSPDVIVTDEIGRQEDVYAIEEALNSGIIVVASAHGKDISDISNRPI 289
Query: 150 LSDLI 154
L L+
Sbjct: 290 LKQLM 294
>gi|255524184|ref|ZP_05391144.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
gi|296186639|ref|ZP_06855041.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
gi|255512169|gb|EET88449.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
gi|296048676|gb|EFG88108.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
Length = 308
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 69/127 (54%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +SD + K+V ++D +EIG IP +G R +
Sbjct: 149 PKCGKTTLIRDIVRNISDGMKQKAFTGKKVCVIDERSEIGACYNGIPQLKLGL--RTDIL 206
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ L+ + ++ A+ + P+V++ DEIGT + + GV LI T HG +E++ K
Sbjct: 207 DSCLKSQGIMMAIRSMSPDVVVCDEIGTYKDMDSILFALNSGVNLITTIHGYGIEDLYKR 266
Query: 148 PILSDLI 154
P+ +++
Sbjct: 267 PVFKEIV 273
>gi|153938479|ref|YP_001391217.1| stage III sporulation protein AA [Clostridium botulinum F str.
Langeland]
gi|384462236|ref|YP_005674831.1| stage III sporulation protein AA [Clostridium botulinum F str.
230613]
gi|152934375|gb|ABS39873.1| stage III sporulation protein AA [Clostridium botulinum F str.
Langeland]
gi|295319253|gb|ADF99630.1| stage III sporulation protein AA [Clostridium botulinum F str.
230613]
Length = 307
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDEF 54
+R++ L ++ +Y+ +K++ + + P GKTT++R+I++ +SD
Sbjct: 106 IRDISSLNIRICREIYNASKLVMPYIVENGHVLNTIIISPPKCGKTTIIRDISKKISDGV 165
Query: 55 Q------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
K+V ++D +EI G +P +G R V + + + ++ A+ + PEV
Sbjct: 166 DALNLKGKKVSVIDERSEIAGSYNGVPQLDVGL--RTDVLDNCPKSEGIVMAIRSMAPEV 223
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
II DEIGT + + GV LI T HG +ENI P+ +++
Sbjct: 224 IICDEIGTYNDVESILIALNSGVSLITTIHGFGVENIYNRPVFKEIV 270
>gi|317498108|ref|ZP_07956410.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894585|gb|EFV16765.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_63FAA]
Length = 315
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQH 93
PG GKTT++R++ R +SDE Q V +VD +EIG + + +G + V + +
Sbjct: 166 PGCGKTTLLRDMIRKISDEGQT-VGVVDERSEIGACYQGVAQNDLGI--QTDVMDACEKG 222
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+ M + + P+VI VDEIG++ + A A RG ++ TAHG+ E++ KNP + ++
Sbjct: 223 QGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNPYMREI 282
Query: 154 I 154
I
Sbjct: 283 I 283
>gi|291559558|emb|CBL38358.1| stage III sporulation protein AA [butyrate-producing bacterium
SSC/2]
Length = 308
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 79/142 (55%), Gaps = 10/142 (7%)
Query: 18 LYS----INKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GD 72
LYS + K+I +S PG GKTT++R++ R +SDE Q V +VD +EIG
Sbjct: 140 LYSRCTRMGKLIPTLIIS--PPGCGKTTLLRDMIRKISDEGQT-VGVVDERSEIGACYQG 196
Query: 73 IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVML 132
+ + +G + V + + + M + + P+VI VDEIG++ + A A RG +
Sbjct: 197 VAQNDLGI--QTDVMDACEKGQGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSI 254
Query: 133 IGTAHGEWLENIIKNPILSDLI 154
+ TAHG+ E++ KNP + ++I
Sbjct: 255 LATAHGKNKESLSKNPYMREII 276
>gi|238917027|ref|YP_002930544.1| stage III sporulation protein AA [Eubacterium eligens ATCC 27750]
gi|238872387|gb|ACR72097.1| stage III sporulation protein AA [Eubacterium eligens ATCC 27750]
Length = 289
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQH 93
PG GKTT++R+I R LSD ++K VV++D EI +P + IG R V + +
Sbjct: 150 PGFGKTTLLRDIIRQLSDIYRKNVVLIDERCEIAACVNGVPCNDIGC--RTDVLDGCNKL 207
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 141
+ AV + P+V+ +DEIG E + A + + G +IGTAHG +
Sbjct: 208 TGVYMAVRSLSPQVVAMDEIGGEDDIKAVKYCIKSGCAVIGTAHGSGI 255
>gi|167037501|ref|YP_001665079.1| ATPase AAA [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320115915|ref|YP_004186074.1| stage III sporulation protein AA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856335|gb|ABY94743.1| AAA ATPase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929006|gb|ADV79691.1| stage III sporulation protein AA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 332
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S+ K+V +VD +EI G IP +G R V
Sbjct: 165 PQCGKTTLLRDITRWISNGIDFLGFKGKKVGVVDERSEIAGCYNGIPQMDVGI--RTDVL 222
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + MI + + PEV++ DEIG + + A + GV +I T H +E+++K
Sbjct: 223 DGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHANDIEDLMKK 282
Query: 148 PILSDLI 154
P+L D+I
Sbjct: 283 PVLKDVI 289
>gi|429762047|ref|ZP_19294454.1| stage III sporulation protein AA [Anaerostipes hadrus DSM 3319]
gi|429182593|gb|EKY23691.1| stage III sporulation protein AA [Anaerostipes hadrus DSM 3319]
Length = 345
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQH 93
PG GKTT++R++ R +SDE Q V +VD +EIG + + +G + V + +
Sbjct: 196 PGCGKTTLLRDMIRKISDEGQT-VGVVDERSEIGACYQGVAQNDLGI--QTDVMDACEKG 252
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+ M + + P+VI VDEIG++ + A A RG ++ TAHG+ E++ KNP + ++
Sbjct: 253 QGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNPYMREI 312
Query: 154 I 154
I
Sbjct: 313 I 313
>gi|167767112|ref|ZP_02439165.1| hypothetical protein CLOSS21_01630 [Clostridium sp. SS2/1]
gi|167711087|gb|EDS21666.1| stage III sporulation protein AA [Clostridium sp. SS2/1]
Length = 342
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQH 93
PG GKTT++R++ R +SDE Q V +VD +EIG + + +G + V + +
Sbjct: 193 PGCGKTTLLRDMIRKISDEGQT-VGVVDERSEIGACYQGVAQNDLGI--QTDVMDACEKG 249
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+ M + + P+VI VDEIG++ + A A RG ++ TAHG+ E++ KNP + ++
Sbjct: 250 QGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNPYMREI 309
Query: 154 I 154
I
Sbjct: 310 I 310
>gi|384044940|ref|YP_005492957.1| stage III sporulation protein AA [Bacillus megaterium WSH-002]
gi|345442631|gb|AEN87648.1| Stage III sporulation protein AA [Bacillus megaterium WSH-002]
Length = 315
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 15/151 (9%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK------RVVIVDTS 64
++ F Y Y + +I P GKTT++R++ARV+S ++ +V IVD
Sbjct: 128 LIPFLYNRYWQSTVIIG------PPQTGKTTMIRDLARVISTGIERSKIPPFKVGIVDER 181
Query: 65 NEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
+EI G +P G+ RM + + + + M+ + + P+V+IVDE+G+E + A
Sbjct: 182 SEIAGAVKGVPQHTFGS--RMDLLDSCPKAEGMMMMIRSMSPDVLIVDEVGSEEDCKAVL 239
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
GV +I T HG +++++K P L L+
Sbjct: 240 EAVNAGVRVIMTVHGYDIDDLMKRPTLQALM 270
>gi|319651504|ref|ZP_08005632.1| stage III sporulation protein AA [Bacillus sp. 2_A_57_CT2]
gi|317396819|gb|EFV77529.1| stage III sporulation protein AA [Bacillus sp. 2_A_57_CT2]
Length = 307
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLS------DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR++S D +V IVD +EI G IP G R+ V
Sbjct: 145 PQTGKTTLLRDIARIISSGDPNNDFPASKVGIVDERSEIAGCVNGIPQMTFGN--RIDVL 202
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + PEV++VDEIG +A A G+ LI T HG LE I K
Sbjct: 203 DACPKAEGMMMMIRSMSPEVLVVDEIGRHEDAEAIMEAVNAGIKLIMTTHGNSLEEIKKR 262
Query: 148 PILSDLI 154
P L ++
Sbjct: 263 PTLKAIL 269
>gi|167040163|ref|YP_001663148.1| ATPase AAA [Thermoanaerobacter sp. X514]
gi|300914246|ref|ZP_07131562.1| stage III sporulation protein AA [Thermoanaerobacter sp. X561]
gi|307724518|ref|YP_003904269.1| stage III sporulation protein AA [Thermoanaerobacter sp. X513]
gi|166854403|gb|ABY92812.1| AAA ATPase [Thermoanaerobacter sp. X514]
gi|300889181|gb|EFK84327.1| stage III sporulation protein AA [Thermoanaerobacter sp. X561]
gi|307581579|gb|ADN54978.1| stage III sporulation protein AA [Thermoanaerobacter sp. X513]
Length = 332
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S+ K+V +VD +EI G IP +G R V
Sbjct: 165 PQCGKTTLLRDITRWISNGIDFLGFKGKKVGVVDERSEIAGCYNGIPQMDVGL--RTDVL 222
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + MI + + PEV++ DEIG + + A + GV +I T H +E+++K
Sbjct: 223 DGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHANDIEDLMKK 282
Query: 148 PILSDLI 154
P+L D+I
Sbjct: 283 PVLKDVI 289
>gi|294501214|ref|YP_003564914.1| stage III sporulation protein AA [Bacillus megaterium QM B1551]
gi|295706561|ref|YP_003599636.1| stage III sporulation protein AA [Bacillus megaterium DSM 319]
gi|294351151|gb|ADE71480.1| stage III sporulation protein AA [Bacillus megaterium QM B1551]
gi|294804220|gb|ADF41286.1| stage III sporulation protein AA [Bacillus megaterium DSM 319]
Length = 315
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 15/151 (9%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK------RVVIVDTS 64
++ F Y Y + +I P GKTT++R++ARV+S ++ +V IVD
Sbjct: 128 LIPFLYNRYWQSTVIIG------PPQTGKTTMIRDLARVISTGIERSKIPPFKVGIVDER 181
Query: 65 NEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 123
+EI G +P G+ RM + + + + M+ + + P+V+IVDE+G+E + A
Sbjct: 182 SEIAGAVKGVPQHTFGS--RMDLLDSCPKAEGMMMMIRSMSPDVLIVDEVGSEEDCKAVL 239
Query: 124 SIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
GV +I T HG +++++K P L L+
Sbjct: 240 EAVNAGVRVIMTVHGYDIDDLMKRPTLQALM 270
>gi|188590784|ref|YP_001921561.1| stage III sporulation protein AA [Clostridium botulinum E3 str.
Alaska E43]
gi|188501065|gb|ACD54201.1| stage III sporulation protein AA [Clostridium botulinum E3 str.
Alaska E43]
Length = 306
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDEF 54
+RN+ + V+F + + I +S R P GKTT++R+I+R +S+
Sbjct: 107 IRNISSINVRFCREVIGCSNKIMKHIISGDRIYNTIIISPPKCGKTTILRDISRNISNGM 166
Query: 55 Q------KRVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
+ K+V ++D +EIG +P S +G R + + L+ + MI ++ + PEV
Sbjct: 167 KSLGLNGKKVSVIDERSEIGACYFGVPQSDLGI--RTDILDNCLKKEGMIMSIRSLSPEV 224
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
+I DEIGT+ + A GV +I + HG +++I K + +LI
Sbjct: 225 LICDEIGTKGDIEALIMAFNSGVNIITSIHGFTIDDIYKRKVFKELI 271
>gi|256752877|ref|ZP_05493715.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus
CCSD1]
gi|256748254|gb|EEU61320.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus
CCSD1]
Length = 332
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S+ K+V +VD +EI G IP +G R V
Sbjct: 165 PQCGKTTLLRDITRWISNGIDFLGFKGKKVGVVDERSEIAGCYNGIPQMDVGL--RTDVL 222
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + MI + + PEV++ DEIG + + A + GV +I T H +E+++K
Sbjct: 223 DGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHANDIEDLMKK 282
Query: 148 PILSDLI 154
P+L D+I
Sbjct: 283 PVLKDVI 289
>gi|251778035|ref|ZP_04820955.1| stage III sporulation protein AA [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243082350|gb|EES48240.1| stage III sporulation protein AA [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 306
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 85/167 (50%), Gaps = 18/167 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDEF 54
+RN+ + V+F + + I +S R P GKTT++R+I+R +S+
Sbjct: 107 IRNISSINVRFCREVIGCSNKIMKHIISGDRIYNTIIISPPKCGKTTILRDISRNISNGM 166
Query: 55 Q------KRVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
+ K+V ++D +EIG +P S +G R + + L+ + MI ++ + PEV
Sbjct: 167 KSLGLNGKKVSVIDERSEIGACYLGVPQSDLGI--RTDILDNCLKKEGMIMSIRSLSPEV 224
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
+I DEIGT+ + A GV +I + HG +++I K + +LI
Sbjct: 225 LICDEIGTKGDIEALIMAFNSGVNIITSIHGFTIDDIYKRKVFKELI 271
>gi|336114346|ref|YP_004569113.1| stage III sporulation protein AA [Bacillus coagulans 2-6]
gi|335367776|gb|AEH53727.1| stage III sporulation protein AA [Bacillus coagulans 2-6]
Length = 310
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT +R+IAR++S +R V IVD +EI G IP G R+ V
Sbjct: 146 PQTGKTTFLRDIARLISSGIPERGISPAKVGIVDERSEIAGCVHGIPQLHFGP--RVDVL 203
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+VI+VDEIG E +A A G+ L+ T HGE +I K
Sbjct: 204 DACPKAEGMMMLIRSMSPDVIVVDEIGREEDAAAIMEAVNAGISLVMTTHGENFRDIQKR 263
Query: 148 PILSDLI 154
PIL ++
Sbjct: 264 PILKKIL 270
>gi|253578537|ref|ZP_04855809.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850855|gb|EES78813.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 312
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 7/126 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR----VVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R+I R LS+ + + +VD +E+ G IP + +G R V +
Sbjct: 156 PRCGKTTLLRDIIRQLSNGWANTQGLTIGVVDERSELAGCYQGIPQNDLGM--RTDVLDC 213
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M V + P+V+ VDE+G E + A S+ G LI TAHG LE+++ P
Sbjct: 214 CPKSEGMQMLVRSMSPDVVAVDELGCEEDFKAVDSVIHCGCKLIATAHGSCLEDVLDQPF 273
Query: 150 LSDLIG 155
L+G
Sbjct: 274 FYKLMG 279
>gi|347753237|ref|YP_004860802.1| stage III sporulation protein AA [Bacillus coagulans 36D1]
gi|347585755|gb|AEP02022.1| stage III sporulation protein AA [Bacillus coagulans 36D1]
Length = 308
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT +R+IAR++S +R V IVD +EI G IP G R+ V
Sbjct: 144 PQTGKTTFLRDIARLISTGIPERGISPAKVGIVDERSEIAGCVHGIPQLHFGP--RVDVL 201
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+VIIVDEIG E +A A G+ L+ T HGE +I K
Sbjct: 202 DACPKAEGMMMLIRSMSPDVIIVDEIGREEDAAAIMEAVNAGISLVMTTHGENFRDINKR 261
Query: 148 PILSDLI 154
PIL ++
Sbjct: 262 PILKKIL 268
>gi|168186187|ref|ZP_02620822.1| stage III sporulation protein AA [Clostridium botulinum C str.
Eklund]
gi|169295742|gb|EDS77875.1| stage III sporulation protein AA [Clostridium botulinum C str.
Eklund]
Length = 298
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQH 93
P GKTT++R+I+R LS +K++ I+D +EI + +P +G R + + ++
Sbjct: 146 PKCGKTTLIRDISRNLSIA-KKKICIIDERSEIASCFEGVPQMDVGI--RTDILDNCVKS 202
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+ +I A+ + PEVI+ DEIGT + + GV LI T HG +E++ + P+ +++
Sbjct: 203 QGIIMAIRSMAPEVIVCDEIGTHRDVESIIMAMNSGVNLITTIHGFGIEDLYRRPVFNEV 262
Query: 154 I 154
I
Sbjct: 263 I 263
>gi|170760679|ref|YP_001787223.1| stage III sporulation protein AA [Clostridium botulinum A3 str.
Loch Maree]
gi|169407668|gb|ACA56079.1| stage III sporulation protein AA [Clostridium botulinum A3 str.
Loch Maree]
Length = 307
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDEF 54
+R++ L ++ +Y+ +K++ + + + P GKTT++R+I++ +SD
Sbjct: 106 IRDISSLNIRICREIYNASKLVMPYIVENGQVLNTIIISPPKCGKTTIIRDISKKISDGV 165
Query: 55 Q------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
K+V ++D +EI G +P +G R V + + + ++ A+ + PEV
Sbjct: 166 DALSLKGKKVSVIDERSEIAGSYNGVPQLDVGL--RTDVLDNCPKSEGIVMAIRSMAPEV 223
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
II DEIGT + + GV LI T HG +E+I P+ +++
Sbjct: 224 IICDEIGTYNDVESILIALNSGVSLITTIHGFGVEDIYNRPVFKEIV 270
>gi|387929684|ref|ZP_10132361.1| stage III sporulation protein AA [Bacillus methanolicus PB1]
gi|387586502|gb|EIJ78826.1| stage III sporulation protein AA [Bacillus methanolicus PB1]
Length = 307
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR++S + +V IVD +EI G IP G R+ V
Sbjct: 145 PQTGKTTLLRDIARIISTGNEDLGFGASKVGIVDERSEIAGCVKGIPQLTFGN--RIDVL 202
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V++VDEIG E +A A G+ LI T HG LE + K
Sbjct: 203 DACPKAEGMMMMIRSMSPDVLVVDEIGREEDALAIMEAVNAGIKLIMTTHGSSLEEVRKR 262
Query: 148 PILSDLI 154
P L +++
Sbjct: 263 PSLKNIL 269
>gi|392955288|ref|ZP_10320831.1| stage III sporulation protein AA [Bacillus macauensis ZFHKF-1]
gi|391878760|gb|EIT87337.1| stage III sporulation protein AA [Bacillus macauensis ZFHKF-1]
Length = 308
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 9/126 (7%)
Query: 35 PGVGKTTVMREIARVLS--DE----FQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR++S DE ++V IVD +EI G IP +G+ R+ V
Sbjct: 150 PQTGKTTLLRDLARLISVGDEQTRISSRKVGIVDERSEIAGSVRGIPQFELGS--RVDVL 207
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + PE++IVDEIG + + A GV LI TAHG L+ +K
Sbjct: 208 DACPKAEGMMMLIRSMSPEILIVDEIGRKEDVEAMIEAMHAGVGLIATAHGYSLQEAMKR 267
Query: 148 PILSDL 153
P L L
Sbjct: 268 PALEAL 273
>gi|149183869|ref|ZP_01862262.1| stage III sporulation protein AA [Bacillus sp. SG-1]
gi|148848430|gb|EDL62687.1| stage III sporulation protein AA [Bacillus sp. SG-1]
Length = 309
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 67/129 (51%), Gaps = 11/129 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQK--------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 85
P GKTT++R+IAR++S F + +V IVD +EI G +P G R+
Sbjct: 145 PQTGKTTMLRDIARIVSTGFPEESIPIPPYKVGIVDERSEIAGCVHGVPQLQFGP--RID 202
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
V + + + M+ + + P+VIIVDEIG + A G+ LI T HG LE I
Sbjct: 203 VLDACPKAEGMMMLIRSMSPDVIIVDEIGRREDGQAILEAVNAGITLIMTTHGHSLEEIS 262
Query: 146 KNPILSDLI 154
K P L ++I
Sbjct: 263 KRPYLKEII 271
>gi|345017586|ref|YP_004819939.1| stage III sporulation protein AA [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032929|gb|AEM78655.1| stage III sporulation protein AA [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 332
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S+ K+V VD +EI G IP +G R V
Sbjct: 165 PQCGKTTLLRDITRWISNGIDFLGFKGKKVGAVDERSEIAGCYNGIPQMDVGI--RTDVL 222
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + MI + + PEV++ DEIG + + A + GV +I T H +E+++K
Sbjct: 223 DGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHANDIEDLMKK 282
Query: 148 PILSDLI 154
P+L D+I
Sbjct: 283 PVLKDVI 289
>gi|170757502|ref|YP_001781446.1| stage III sporulation protein AA [Clostridium botulinum B1 str.
Okra]
gi|429246197|ref|ZP_19209539.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001628]
gi|169122714|gb|ACA46550.1| stage III sporulation protein AA [Clostridium botulinum B1 str.
Okra]
gi|428756801|gb|EKX79331.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001628]
Length = 307
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDEF 54
+R++ L ++ +Y+ +K++ + + P GKTT++R+I++ +SD
Sbjct: 106 IRDISSLNIRICREIYNASKLVMPYIVENGHVLNTIIISPPKCGKTTIIRDISKKISDGV 165
Query: 55 Q------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
K+V ++D +EI G +P +G R V + + + ++ A+ + PEV
Sbjct: 166 DALNLKGKKVSVIDERSEIAGSYNGVPQLDVGL--RTDVLDNCPKSEGIVMAIRSMAPEV 223
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
II DEIGT + + GV LI T HG +E+I P+ +++
Sbjct: 224 IICDEIGTYNDVESILIALNSGVSLITTIHGFGVEDIYNRPVFKEIV 270
>gi|326390193|ref|ZP_08211754.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus JW
200]
gi|325993841|gb|EGD52272.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus JW
200]
Length = 332
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S+ K+V VD +EI G IP +G R V
Sbjct: 165 PQCGKTTLLRDITRWISNGIDFLGFKGKKVGAVDERSEIAGCYNGIPQMDVGI--RTDVL 222
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + MI + + PEV++ DEIG + + A + GV +I T H +E+++K
Sbjct: 223 DGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHANDIEDLMKK 282
Query: 148 PILSDLI 154
P+L D+I
Sbjct: 283 PVLKDVI 289
>gi|392941068|ref|ZP_10306712.1| LOW QUALITY PROTEIN: stage III sporulation protein AA
[Thermoanaerobacter siderophilus SR4]
gi|392292818|gb|EIW01262.1| LOW QUALITY PROTEIN: stage III sporulation protein AA
[Thermoanaerobacter siderophilus SR4]
Length = 332
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S+ K+V VD +EI G IP +G R V
Sbjct: 165 PQCGKTTLLRDITRWISNGIDFLGFKGKKVGAVDERSEIAGCYNGIPQMDVGI--RTDVL 222
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + MI + + PEV++ DEIG + + A + GV +I T H +E+++K
Sbjct: 223 DGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHANDIEDLMKK 282
Query: 148 PILSDLI 154
P+L D+I
Sbjct: 283 PVLKDVI 289
>gi|148379856|ref|YP_001254397.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
3502]
gi|153932422|ref|YP_001384153.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
19397]
gi|153935244|ref|YP_001387694.1| stage III sporulation protein AA [Clostridium botulinum A str.
Hall]
gi|168180483|ref|ZP_02615147.1| stage III sporulation protein AA [Clostridium botulinum NCTC 2916]
gi|226949193|ref|YP_002804284.1| stage III sporulation protein AA [Clostridium botulinum A2 str.
Kyoto]
gi|148289340|emb|CAL83436.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
3502]
gi|152928466|gb|ABS33966.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
19397]
gi|152931158|gb|ABS36657.1| stage III sporulation protein AA [Clostridium botulinum A str.
Hall]
gi|182668758|gb|EDT80736.1| stage III sporulation protein AA [Clostridium botulinum NCTC 2916]
gi|226844597|gb|ACO87263.1| stage III sporulation protein AA [Clostridium botulinum A2 str.
Kyoto]
Length = 307
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 18/167 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDEF 54
+R++ L ++ +Y+ +K++ + + P GKTT++R+I++ +SD
Sbjct: 106 IRDISSLNIRICREIYNASKLVMPYIVENGHVLNTIIISPPKCGKTTIIRDISKKISDGV 165
Query: 55 Q------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
K+V ++D +EI G +P +G R V + + + ++ A+ + PEV
Sbjct: 166 DALNLKGKKVSVIDERSEIAGSYNGVPQLDVGL--RTDVLDNCPKSEGIVMAIRSMAPEV 223
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
II DEIGT + + GV LI T HG +E+I P+ +++
Sbjct: 224 IICDEIGTYNDVESILIALNSGVSLITTIHGFGVEDIYNRPVFKEIV 270
>gi|424836158|ref|ZP_18260815.1| stage III sporulation protein AA [Clostridium sporogenes PA 3679]
gi|365977560|gb|EHN13659.1| stage III sporulation protein AA [Clostridium sporogenes PA 3679]
Length = 307
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDEF 54
+R++ L ++ +Y+ +K++ + + + P GKTT++R+I++ +SD
Sbjct: 106 IRDISSLNIRICREIYNASKLVMPYIVENGQVLNTIIISPPKCGKTTIIRDISKKISDGV 165
Query: 55 Q------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
++V ++D +EI G +P +G R V + + + ++ A+ + PEV
Sbjct: 166 DSLNLKGQKVSVIDERSEIAGSYNGVPQLDVGL--RTDVLDNCPKSEGIVMAIRSMAPEV 223
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
II DEIGT + + GV LI T HG +E+I P+ +++
Sbjct: 224 IICDEIGTYKDVESILIALNSGVSLITTIHGFGVEDIYNRPVFKEIV 270
>gi|187779500|ref|ZP_02995973.1| hypothetical protein CLOSPO_03096 [Clostridium sporogenes ATCC
15579]
gi|187773125|gb|EDU36927.1| stage III sporulation protein AA [Clostridium sporogenes ATCC
15579]
Length = 310
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDEF 54
+R++ L ++ +Y+ +K++ + + + P GKTT++R+I++ +SD
Sbjct: 109 IRDISSLNIRICREIYNASKLVMPYIVENGQVLNTIIISPPKCGKTTIIRDISKKISDGV 168
Query: 55 Q------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
++V ++D +EI G +P +G R V + + + ++ A+ + PEV
Sbjct: 169 DALNLKGQKVSVIDERSEIAGSYNGVPQLDVGL--RTDVLDNCPKSEGIVMAIRSMAPEV 226
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
II DEIGT + + GV LI T HG +E+I P+ +++
Sbjct: 227 IICDEIGTYKDVESILIALNSGVSLITTIHGFGVEDIYNRPVFKEIV 273
>gi|168184581|ref|ZP_02619245.1| stage III sporulation protein AA [Clostridium botulinum Bf]
gi|237795310|ref|YP_002862862.1| stage III sporulation protein AA [Clostridium botulinum Ba4 str.
657]
gi|182672334|gb|EDT84295.1| stage III sporulation protein AA [Clostridium botulinum Bf]
gi|229261521|gb|ACQ52554.1| stage III sporulation protein AA [Clostridium botulinum Ba4 str.
657]
Length = 307
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 84/167 (50%), Gaps = 18/167 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDEF 54
+R++ L ++ +Y+ +K++ + + + P GKTT++R+I++ +SD
Sbjct: 106 IRDISSLNIRICREIYNASKLVMPYIVENGQVLNTIIISPPKCGKTTIIRDISKKISDGV 165
Query: 55 Q------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
K+V ++D +EI G +P +G R V + + + ++ A+ + PEV
Sbjct: 166 DALSLKGKKVSVIDERSEIAGSYNGVPQLDVGL--RTDVLDNCPKSEGIVMAIRSMAPEV 223
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
+I DEIGT + + GV LI T HG +E+I P+ +++
Sbjct: 224 MICDEIGTYNDVESILIALNSGVSLITTIHGFGVEDIYNRPVFKEIV 270
>gi|110800786|ref|YP_696516.1| stage III sporulation protein AA [Clostridium perfringens ATCC
13124]
gi|168206113|ref|ZP_02632118.1| stage III sporulation protein AA [Clostridium perfringens E str.
JGS1987]
gi|168210804|ref|ZP_02636429.1| stage III sporulation protein AA [Clostridium perfringens B str.
ATCC 3626]
gi|169343721|ref|ZP_02864720.1| stage III sporulation protein AA [Clostridium perfringens C str.
JGS1495]
gi|182625637|ref|ZP_02953406.1| stage III sporulation protein AA [Clostridium perfringens D str.
JGS1721]
gi|422346502|ref|ZP_16427416.1| stage III sporulation protein AA [Clostridium perfringens
WAL-14572]
gi|110675433|gb|ABG84420.1| stage III sporulation protein AA [Clostridium perfringens ATCC
13124]
gi|169298281|gb|EDS80371.1| stage III sporulation protein AA [Clostridium perfringens C str.
JGS1495]
gi|170662470|gb|EDT15153.1| stage III sporulation protein AA [Clostridium perfringens E str.
JGS1987]
gi|170711143|gb|EDT23325.1| stage III sporulation protein AA [Clostridium perfringens B str.
ATCC 3626]
gi|177909039|gb|EDT71514.1| stage III sporulation protein AA [Clostridium perfringens D str.
JGS1721]
gi|373226047|gb|EHP48374.1| stage III sporulation protein AA [Clostridium perfringens
WAL-14572]
Length = 294
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S+ KR V++D +EI IP +G R V
Sbjct: 144 PKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM--RTDVY 201
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ ++ + M+ AV PEVII DEIGT + GV +I T HG +E + +
Sbjct: 202 DNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEELYRR 261
Query: 148 PILSDLI 154
P+ +++
Sbjct: 262 PVFREIV 268
>gi|168215461|ref|ZP_02641086.1| stage III sporulation protein AA [Clostridium perfringens NCTC
8239]
gi|182382302|gb|EDT79781.1| stage III sporulation protein AA [Clostridium perfringens NCTC
8239]
Length = 294
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S+ KR V++D +EI IP +G R V
Sbjct: 144 PKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM--RTDVY 201
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ ++ + M+ AV PEVII DEIGT + GV +I T HG +E + +
Sbjct: 202 DNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEELYRR 261
Query: 148 PILSDLI 154
P+ +++
Sbjct: 262 PVFREIV 268
>gi|422874752|ref|ZP_16921237.1| stage III sporulation protein AA [Clostridium perfringens F262]
gi|380304393|gb|EIA16682.1| stage III sporulation protein AA [Clostridium perfringens F262]
Length = 294
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S+ KR V++D +EI IP +G R V
Sbjct: 144 PKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM--RTDVY 201
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ ++ + M+ AV PEVII DEIGT + GV +I T HG +E + +
Sbjct: 202 DNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEELYRR 261
Query: 148 PILSDLI 154
P+ +++
Sbjct: 262 PVFREIV 268
>gi|110801582|ref|YP_699116.1| stage III sporulation protein AA [Clostridium perfringens SM101]
gi|110682083|gb|ABG85453.1| stage III sporulation protein AA [Clostridium perfringens SM101]
Length = 294
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S+ KR V++D +EI IP +G R V
Sbjct: 144 PKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM--RTDVY 201
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ ++ + M+ AV PEVII DEIGT + GV +I T HG +E + +
Sbjct: 202 DNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEELYRR 261
Query: 148 PILSDLI 154
P+ +++
Sbjct: 262 PVFREIV 268
>gi|317132167|ref|YP_004091481.1| stage III sporulation protein AA [Ethanoligenens harbinense YUAN-3]
gi|315470146|gb|ADU26750.1| stage III sporulation protein AA [Ethanoligenens harbinense YUAN-3]
Length = 336
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 63/117 (53%), Gaps = 6/117 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR--VVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSL 91
PG GKTTV+R++AR LS+ R V +VD EI +P + IG + V +
Sbjct: 167 PGCGKTTVLRDLARQLSNGVSGRCRVSVVDERGEIAATFKGVPQNDIG---QCDVLDGYP 223
Query: 92 QHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
+ + +++AV P+V+I DEIG E +A A + GV +I +AH +E + P
Sbjct: 224 KGEGILQAVRCLSPDVVICDEIGGETDARAVAASLNAGVAVIASAHAAKMEELFARP 280
>gi|421874483|ref|ZP_16306087.1| stage III sporulation protein AA [Brevibacillus laterosporus GI-9]
gi|372456527|emb|CCF15636.1| stage III sporulation protein AA [Brevibacillus laterosporus GI-9]
Length = 320
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 19 YSINKIIFDFFLSYFRPGVGKTTVMREIARVLS--DEFQ--KRVVIVDTSNEIGGD-GDI 73
Y ++ F L P GKTT++R++AR +S +E+ K+V IVD +EI G I
Sbjct: 142 YLFDQGQFQSTLVISPPQCGKTTLLRDLARSISYGNEWSSSKKVGIVDERSEIAGCYNGI 201
Query: 74 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 133
P +G R V + + M+ + + P++++VDEIG + ++ A GV ++
Sbjct: 202 PQRDVGP--RTDVLDACPKAIGMMMMIRSMSPDLVVVDEIGRQEDSEAIWEALHAGVGVL 259
Query: 134 GTAHGEWLENIIKNPILSDLI 154
+AHG LE+I K P +S LI
Sbjct: 260 CSAHGISLEDIAKRPTISRLI 280
>gi|339010279|ref|ZP_08642849.1| stage III sporulation protein AA [Brevibacillus laterosporus LMG
15441]
gi|338772434|gb|EGP31967.1| stage III sporulation protein AA [Brevibacillus laterosporus LMG
15441]
Length = 320
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 19 YSINKIIFDFFLSYFRPGVGKTTVMREIARVLS--DEFQ--KRVVIVDTSNEIGGD-GDI 73
Y ++ F L P GKTT++R++AR +S +E+ K+V IVD +EI G I
Sbjct: 142 YLFDQGQFQSTLVISPPQCGKTTLLRDLARSISYGNEWSSSKKVGIVDERSEIAGCYNGI 201
Query: 74 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 133
P +G R V + + M+ + + P++++VDEIG + ++ A GV ++
Sbjct: 202 PQRDVGP--RTDVLDACPKAIGMMMMIRSMSPDLVVVDEIGRQEDSEAIWEALHAGVGVL 259
Query: 134 GTAHGEWLENIIKNPILSDLI 154
+AHG LE+I K P +S LI
Sbjct: 260 CSAHGISLEDIAKRPTISRLI 280
>gi|291520786|emb|CBK79079.1| stage III sporulation protein AA [Coprococcus catus GD/7]
Length = 351
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 35 PGVGKTTVMREIARVLSD----EFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
PG GKTT++R++ R S+ E +RV +VD +EI IP + +G R V +
Sbjct: 160 PGCGKTTMLRDVIRQFSNGCGQEAGRRVGVVDERSEIAACYRGIPQNDMGI--RTDVLDG 217
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+H M + + PE++ VDEIG+ + A ++ G L+ TAHG +E + P
Sbjct: 218 CAKHMGMQMMLRSMTPEILAVDEIGSRTDKEAIDAVMNCGCCLLATAHGASMEKMQMRPA 277
Query: 150 LSDL 153
L +
Sbjct: 278 LRQM 281
>gi|18310815|ref|NP_562749.1| stage III sporulation protein AA [Clostridium perfringens str. 13]
gi|18145497|dbj|BAB81539.1| stage III sporulation protein AA [Clostridium perfringens str. 13]
Length = 294
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S+ KR V++D +EI IP +G R V
Sbjct: 144 PKCGKTTLLRDITRNISNGISQIGLKGKRTVVIDERSEIAACYNGIPQMNVGM--RTDVY 201
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ ++ + M+ AV PEVII DEIGT + GV +I T HG +E + +
Sbjct: 202 DNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEELYRR 261
Query: 148 PILSDLI 154
P+ +++
Sbjct: 262 PVFREIV 268
>gi|226323219|ref|ZP_03798737.1| hypothetical protein COPCOM_00991 [Coprococcus comes ATCC 27758]
gi|225208409|gb|EEG90763.1| stage III sporulation protein AA [Coprococcus comes ATCC 27758]
Length = 305
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 13 KFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIG 68
K F + ++ +S PG GKTT++R++ R +SD + + V +VD +EIG
Sbjct: 130 KLFPVILEKGRLCHTMIIS--PPGGGKTTLLRDLVRQISDGNRWVEGRNVGVVDERSEIG 187
Query: 69 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 127
G +P + +G R + + + + M+ V + PEVI DEIGT + A
Sbjct: 188 GCYRGVPQNQLGM--RTDILDNCPKAEGMMMLVRSMAPEVIAADEIGTAKDVEAIEYAMH 245
Query: 128 RGVMLIGTAHGEWLENIIKNPILSDLI 154
G ++ T HG ++ I + P++S+L+
Sbjct: 246 CGATMLTTVHGSGMDEIREKPLVSNLV 272
>gi|138895978|ref|YP_001126431.1| stage III sporulation protein AA [Geobacillus thermodenitrificans
NG80-2]
gi|196248870|ref|ZP_03147570.1| stage III sporulation protein AA [Geobacillus sp. G11MC16]
gi|134267491|gb|ABO67686.1| Stage III sporulation protein AA [Geobacillus thermodenitrificans
NG80-2]
gi|196211746|gb|EDY06505.1| stage III sporulation protein AA [Geobacillus sp. G11MC16]
Length = 306
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 70/125 (56%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++AR++S ++ +V IVD +EI G IP + G R+ V +
Sbjct: 144 PQTGKTTLLRDVARLISSGTERIPAQKVAIVDERSEIAGCVKGIPQFSFGP--RLDVLDA 201
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ + + P+VIIVDEIG E ++ A A GV + T HG ++++ + P
Sbjct: 202 CPKAEGMMMMIRSMSPDVIIVDEIGREEDSEAVLEAANAGVSVWTTVHGRSIKDVQQRPT 261
Query: 150 LSDLI 154
L ++
Sbjct: 262 LGSVM 266
>gi|410453700|ref|ZP_11307645.1| stage III sporulation protein AA [Bacillus bataviensis LMG 21833]
gi|409932914|gb|EKN69868.1| stage III sporulation protein AA [Bacillus bataviensis LMG 21833]
Length = 308
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR++S + +V +VD +EI G +P G R+ V
Sbjct: 145 PQTGKTTLLRDIARIISTGNRAGGIQAYKVGVVDERSEIAGCVHGVPQLTFG--HRLDVL 202
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + +A A G+ LI T HG +E + K
Sbjct: 203 DACPKAEGMMMLIRSMSPDVLIVDEIGRKEDAEAILEAVHAGIKLIMTTHGTSIEELRKR 262
Query: 148 PILSDLI 154
P L DLI
Sbjct: 263 PSLRDLI 269
>gi|168214407|ref|ZP_02640032.1| stage III sporulation protein AA [Clostridium perfringens CPE str.
F4969]
gi|170714158|gb|EDT26340.1| stage III sporulation protein AA [Clostridium perfringens CPE str.
F4969]
Length = 294
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S+ KR V++D +EI IP +G R V
Sbjct: 144 PKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM--RTDVY 201
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ ++ + M+ AV PEVII DEIGT + GV +I T HG +E + +
Sbjct: 202 DNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEELYRR 261
Query: 148 PILSDLI 154
P+ +++
Sbjct: 262 PVFREIM 268
>gi|337746932|ref|YP_004641094.1| stage III sporulation protein AA [Paenibacillus mucilaginosus
KNP414]
gi|336298121|gb|AEI41224.1| Stage III sporulation protein AA [Paenibacillus mucilaginosus
KNP414]
Length = 334
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQK--------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 85
P +GKTT++R++AR+LS + +V IVD +EI +P +G R
Sbjct: 161 PQLGKTTLVRDLARLLSSGSAEAGIGGRSFKVGIVDERSEIAACVRGVPRFDVGP--RTD 218
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
V + + + M+ + + PEV+I DEIG +A A G+ LI TAHG ++++
Sbjct: 219 VLDGCPKAEGMMMMIRSMSPEVLIADEIGRSEDAAAIHEALHAGIGLIATAHGRDVDDVR 278
Query: 146 KNPILSDLIGG 156
+ PIL +L+ G
Sbjct: 279 RRPILKELLAG 289
>gi|386723401|ref|YP_006189727.1| stage III sporulation protein AA [Paenibacillus mucilaginosus K02]
gi|384090526|gb|AFH61962.1| stage III sporulation protein AA [Paenibacillus mucilaginosus K02]
Length = 334
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQK--------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 85
P +GKTT++R++AR+LS + +V IVD +EI +P +G R
Sbjct: 161 PQLGKTTLVRDLARLLSSGSAEAGIGGRSFKVGIVDERSEIAACVRGVPRFDVGP--RTD 218
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
V + + + M+ + + PEV+I DEIG +A A G+ LI TAHG ++++
Sbjct: 219 VLDGCPKAEGMMMMIRSMSPEVLIADEIGRSEDAAAIHEALHAGIGLIATAHGRDVDDVR 278
Query: 146 KNPILSDLIGG 156
+ PIL +L+ G
Sbjct: 279 RRPILKELLAG 289
>gi|404371401|ref|ZP_10976707.1| stage III sporulation protein AA [Clostridium sp. 7_2_43FAA]
gi|226912470|gb|EEH97671.1| stage III sporulation protein AA [Clostridium sp. 7_2_43FAA]
Length = 300
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IA+ +S K+V I+D +EI +P +G R +
Sbjct: 140 PKCGKTTILRDIAKNISTGMPIVNLKGKKVSIIDERSEIAACFNGVPQLDVGI--RSDIL 197
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ L+ MI A+ + P+++I DEIGT+ + A GV +I T HG +E++ K
Sbjct: 198 DNCLKKDGMIMAIRSLSPDILICDEIGTDGDIEALHMAFNSGVNIIVTIHGYSIEDVYKR 257
Query: 148 PILSDLI 154
+ DL+
Sbjct: 258 KVFKDLL 264
>gi|379720795|ref|YP_005312926.1| Stage III sporulation protein AA [Paenibacillus mucilaginosus 3016]
gi|378569467|gb|AFC29777.1| Stage III sporulation protein AA [Paenibacillus mucilaginosus 3016]
Length = 342
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 11/131 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQK--------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 85
P +GKTT++R++AR+LS + +V IVD +EI +P +G R
Sbjct: 169 PQLGKTTLVRDLARLLSSGSAEAGIGGRSFKVGIVDERSEIAACVRGVPRFDVGP--RTD 226
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
V + + + M+ + + PEV+I DEIG +A A G+ LI TAHG ++++
Sbjct: 227 VLDGCPKAEGMMMMIRSMSPEVLIADEIGRSEDAAAIHEALHAGIGLIATAHGRDVDDVR 286
Query: 146 KNPILSDLIGG 156
+ PIL +L+ G
Sbjct: 287 RRPILKELLAG 297
>gi|166030404|ref|ZP_02233233.1| hypothetical protein DORFOR_00065 [Dorea formicigenerans ATCC
27755]
gi|166029762|gb|EDR48519.1| stage III sporulation protein AA [Dorea formicigenerans ATCC 27755]
Length = 316
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLS--DEFQK--RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
PG GKTT++R++ R +S +EF K V +VD +EI G + + +G R V +
Sbjct: 152 PGCGKTTLLRDLIRQISEGNEFIKGMSVGVVDERSEIAGCYRGVAQNHLGI--RTDVLDG 209
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + MI + + PEVI VDEIG + HA G +I TAH + +E + K P+
Sbjct: 210 CPKAEGMIMLIRSMRPEVIAVDEIGGSEDVHAIEYAMHCGCRMIATAHADSMEELQKKPV 269
Query: 150 LSDLI 154
LI
Sbjct: 270 FDRLI 274
>gi|228910029|ref|ZP_04073849.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 200]
gi|228849546|gb|EEM94380.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 200]
Length = 308
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG E+++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYEDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|154483666|ref|ZP_02026114.1| hypothetical protein EUBVEN_01370 [Eubacterium ventriosum ATCC
27560]
gi|149735576|gb|EDM51462.1| putative stage III sporulation protein AA [Eubacterium ventriosum
ATCC 27560]
Length = 283
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQH 93
PG+GKTT++R I R S+ V +VD NEIGG +P +G R V ++
Sbjct: 148 PGLGKTTLLRNIIRGYSNLKGINVTVVDERNEIGGSYRGVPMINLGL--RTDVISDCTKY 205
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 141
++ A+ + P+VI VDEIG+ A+ A GV ++ T HG+ L
Sbjct: 206 SGIVMAIRSMAPKVIAVDEIGSGADFKAIEYAVNSGVSVVATIHGKDL 253
>gi|326790836|ref|YP_004308657.1| stage III sporulation protein AA [Clostridium lentocellum DSM 5427]
gi|326541600|gb|ADZ83459.1| stage III sporulation protein AA [Clostridium lentocellum DSM 5427]
Length = 314
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
PG GKTT++R++ R LS+ F V +VD +EI +P + +G+ + P
Sbjct: 158 PGCGKTTLLRDMIRYLSEGFCGYGPYTVGVVDERSEIAACYQGVPQNRMGSRTDVLDGCP 217
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
++ M+ + + P+VI VDEIG + A I GV L+ T HG+ +E+ ++ PI
Sbjct: 218 KVEGMRML--LRSMAPQVIAVDEIGKADDCTALEEILNVGVSLLCTVHGKNIEDCLRRPI 275
Query: 150 LSDLI 154
L +L+
Sbjct: 276 LKELL 280
>gi|160893216|ref|ZP_02074004.1| hypothetical protein CLOL250_00762 [Clostridium sp. L2-50]
gi|156865299|gb|EDO58730.1| stage III sporulation protein AA [Clostridium sp. L2-50]
Length = 337
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEF----QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++ R+LSD F + +VD +EIG +P + IG R + +
Sbjct: 162 PRCGKTTLLRDMIRMLSDGFPGFKGNTIGVVDERSEIGACYKGVPQNDIGI--RTDILDC 219
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ M+ + + P++I VDEIG+ + A S+ G LI T HG +++I P
Sbjct: 220 CPKSYGMLMLIRSMSPQIIAVDEIGSRDDIDAIYSVINCGCKLIATVHGNSIDDIRNRPG 279
Query: 150 LSDLI 154
L L+
Sbjct: 280 LRKLV 284
>gi|229163141|ref|ZP_04291096.1| Stage III sporulation protein AA [Bacillus cereus R309803]
gi|228620204|gb|EEK77075.1| Stage III sporulation protein AA [Bacillus cereus R309803]
Length = 308
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYEFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG E+++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYEDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|451819552|ref|YP_007455753.1| stage III sporulation protein AA [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451785531|gb|AGF56499.1| stage III sporulation protein AA [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 308
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSD------EFQKRVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 87
P GKTT++R+IAR +S+ K+VV+VD +EI IP S +G R V
Sbjct: 149 PKCGKTTIIRDIARNISNGVFSLGVSGKKVVVVDERSEIAACHLGIPQSNLGL--RTDVL 206
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ L+ + +I A+ + PEV+I DEIGT+ + A GV +I T HG +E++ K
Sbjct: 207 DNCLKREGLIMAIRSLSPEVLICDEIGTKGDTEALMMAFNSGVNIITTIHGFTVEDLYKR 266
Query: 148 PILSDLI 154
+ SDL+
Sbjct: 267 KVFSDLL 273
>gi|288553343|ref|YP_003425278.1| stage III sporulation protein AA [Bacillus pseudofirmus OF4]
gi|288544503|gb|ADC48386.1| stage III sporulation protein AA [Bacillus pseudofirmus OF4]
Length = 319
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 71/127 (55%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR++S+ +KR V I+D +EI +P +G R+ V
Sbjct: 152 PQTGKTTILRDVARLISEGDEKRGIAPLKVGIIDERSEICASMRGVPQHQLGP--RIDVL 209
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + A + GV +I T HG +++++K
Sbjct: 210 DGCPKAEGMMMMIRSMSPDVLIVDEIGRVEDVLAVQEAVHAGVGVITTVHGHTIDDVLKR 269
Query: 148 PILSDLI 154
P L +L+
Sbjct: 270 PALKELM 276
>gi|197301796|ref|ZP_03166866.1| hypothetical protein RUMLAC_00522 [Ruminococcus lactaris ATCC
29176]
gi|197299236|gb|EDY33766.1| stage III sporulation protein AA [Ruminococcus lactaris ATCC 29176]
Length = 313
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSD--EFQK--RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +SD E+ K V +VD +E+GG I + +GT R V +
Sbjct: 156 PCCGKTTLIRDLIRQISDGNEYVKGCSVGVVDERSELGGCYLGIAQNHLGT--RTDVLDC 213
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + MI + + P+VI VDEIGT + HA + G +I + HG ++ P+
Sbjct: 214 CPKAEGMIMLIRSMSPQVIAVDEIGTVEDIHAIEYAMQCGCRMIASVHGLNMDEASNKPV 273
Query: 150 LSDLI 154
L DLI
Sbjct: 274 LGDLI 278
>gi|373856780|ref|ZP_09599524.1| stage III sporulation protein AA [Bacillus sp. 1NLA3E]
gi|372453759|gb|EHP27226.1| stage III sporulation protein AA [Bacillus sp. 1NLA3E]
Length = 307
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR++S + +V IVD +EI G IP + G R+ V
Sbjct: 145 PQTGKTTLLRDIARIISSGYLPMQLPPFKVGIVDERSEIAGSVNGIPQLSFGP--RIDVL 202
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V++VDEIG + +A A G+ LI T HG L + +
Sbjct: 203 DACPKAEGMMMMIRSMSPDVLVVDEIGRKEDAEAIMEAVNAGIKLIMTTHGNSLAEVQRR 262
Query: 148 PIL 150
P L
Sbjct: 263 PSL 265
>gi|423395504|ref|ZP_17372705.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-1]
gi|423406380|ref|ZP_17383529.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-3]
gi|401654915|gb|EJS72454.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-1]
gi|401660374|gb|EJS77856.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-3]
Length = 308
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASQIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG E+++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYEDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|291550239|emb|CBL26501.1| stage III sporulation protein AA [Ruminococcus torques L2-14]
Length = 314
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 67/125 (53%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSD--EFQK--RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +SD E+ K V +VD +E+GG I + +GT R + +
Sbjct: 158 PCCGKTTLIRDLIRQISDGNEYIKGCSVGVVDERSELGGCYLGIAQNHLGT--RTDILDC 215
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + MI + + P VI VDEIGT + HA + G LI + H ++ K PI
Sbjct: 216 CPKAEGMIMLIRSMAPRVIAVDEIGTSEDIHAIEYAMQCGCRLIASVHSLDMDEASKKPI 275
Query: 150 LSDLI 154
L DLI
Sbjct: 276 LGDLI 280
>gi|346306473|ref|ZP_08848629.1| stage III sporulation protein AA [Dorea formicigenerans 4_6_53AFAA]
gi|345897847|gb|EGX67744.1| stage III sporulation protein AA [Dorea formicigenerans 4_6_53AFAA]
Length = 316
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLS--DEFQK--RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
PG GKTT++R++ R +S +EF K V +VD +EI G + + +G R V +
Sbjct: 152 PGCGKTTLLRDLIRQISEGNEFIKGMSVGVVDERSEIAGCYRGVAQNHLGI--RTDVLDG 209
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + MI + + PEVI VDEIG + HA G ++ TAH + +E + K P+
Sbjct: 210 CPKAEGMIMLIRSMRPEVIAVDEIGGSEDVHAIEYAMHCGCRMLATAHADSMEELQKKPV 269
Query: 150 LSDLI 154
LI
Sbjct: 270 FDRLI 274
>gi|210615799|ref|ZP_03290780.1| hypothetical protein CLONEX_02998 [Clostridium nexile DSM 1787]
gi|210150135|gb|EEA81144.1| hypothetical protein CLONEX_02998 [Clostridium nexile DSM 1787]
Length = 317
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD--GDIPHSAIGTARRMQVPE 88
P GKTT++R++ R +SD + V +VD +E+GG G I ++ R + +
Sbjct: 160 PRCGKTTLLRDVIRQISDGNRWIKGCTVGVVDERSELGGCYLGVIQNN---LGMRTDILD 216
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
+ MI + + P+V+ VDEIG + + HA G ++ TAHG+ +E I K P
Sbjct: 217 RCPKADGMIMLIRSMAPQVVAVDEIGAKEDVHAIEYAMHCGCKMLATAHGDSMEEICKKP 276
Query: 149 ILSDLI 154
I LI
Sbjct: 277 IFEKLI 282
>gi|153810487|ref|ZP_01963155.1| hypothetical protein RUMOBE_00868 [Ruminococcus obeum ATCC 29174]
gi|149833666|gb|EDM88747.1| stage III sporulation protein AA [Ruminococcus obeum ATCC 29174]
Length = 251
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 35 PGVGKTTVMREIARVLS---DEFQKRVV-IVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +S D Q + V +VD +E+ G IP + +G R V +
Sbjct: 98 PRCGKTTLLRDMIRQISNGTDRIQGKTVGVVDERSELAGCYQGIPQNDLGM--RTDVLDA 155
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ K M + + P+V+ VDE+G + + A S+ G L TAHG LE+I++ P
Sbjct: 156 CPKAKGMQMLLRSMSPDVVAVDELGKKEDFKAVESVVHCGCKLFATAHGNSLEDILRQPF 215
Query: 150 LSDL 153
L
Sbjct: 216 FQKL 219
>gi|164688622|ref|ZP_02212650.1| hypothetical protein CLOBAR_02267 [Clostridium bartlettii DSM
16795]
gi|164603035|gb|EDQ96500.1| stage III sporulation protein AA [Clostridium bartlettii DSM 16795]
Length = 321
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 17/133 (12%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGDIPHSAIGTAR-----R 83
P GKTT++R+I R +S+ ++ +V ++D NEI G S +G A+ R
Sbjct: 162 PQCGKTTILRDIVRNISNGNREYGFSGVKVALIDERNEIAG------SCMGVAQLDVGMR 215
Query: 84 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 143
V E + ++ + + P VI+ DEIG E E A + GV LI T HG+ +E+
Sbjct: 216 TDVMETCPKDLGIMMVLRSMSPNVIVTDEIGNEKEIKALYTALNGGVSLITTVHGDSIED 275
Query: 144 IIKNPILSDLIGG 156
I+ L L+ G
Sbjct: 276 ILHRTELKRLLDG 288
>gi|423634977|ref|ZP_17610630.1| stage III sporulation protein AA [Bacillus cereus VD156]
gi|401278963|gb|EJR84893.1| stage III sporulation protein AA [Bacillus cereus VD156]
Length = 308
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSSKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG E++++
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYEDVVRR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|218899357|ref|YP_002447768.1| stage III sporulation protein AA [Bacillus cereus G9842]
gi|228902712|ref|ZP_04066859.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 4222]
gi|228967235|ref|ZP_04128271.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402564392|ref|YP_006607116.1| stage III sporulation protein AA [Bacillus thuringiensis HD-771]
gi|423358766|ref|ZP_17336269.1| stage III sporulation protein AA [Bacillus cereus VD022]
gi|423561330|ref|ZP_17537606.1| stage III sporulation protein AA [Bacillus cereus MSX-A1]
gi|434377318|ref|YP_006611962.1| stage III sporulation protein AA [Bacillus thuringiensis HD-789]
gi|218541836|gb|ACK94230.1| stage III sporulation protein AA [Bacillus cereus G9842]
gi|228792604|gb|EEM40170.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228856899|gb|EEN01412.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 4222]
gi|401084638|gb|EJP92884.1| stage III sporulation protein AA [Bacillus cereus VD022]
gi|401201587|gb|EJR08452.1| stage III sporulation protein AA [Bacillus cereus MSX-A1]
gi|401793044|gb|AFQ19083.1| stage III sporulation protein AA [Bacillus thuringiensis HD-771]
gi|401875875|gb|AFQ28042.1| stage III sporulation protein AA [Bacillus thuringiensis HD-789]
Length = 308
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG E++++
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYEDVVRR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|30022276|ref|NP_833907.1| stage III sporulation protein AA [Bacillus cereus ATCC 14579]
gi|29897833|gb|AAP11108.1| Stage III sporulation protein AA [Bacillus cereus ATCC 14579]
Length = 316
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG E++++
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYEDVVRR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|260588113|ref|ZP_05854026.1| stage III sporulation protein AA [Blautia hansenii DSM 20583]
gi|331082319|ref|ZP_08331445.1| stage III sporulation protein AA [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541640|gb|EEX22209.1| stage III sporulation protein AA [Blautia hansenii DSM 20583]
gi|330400805|gb|EGG80406.1| stage III sporulation protein AA [Lachnospiraceae bacterium
6_1_63FAA]
Length = 323
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +S+ + V +VD +EI G IP + +G R V +
Sbjct: 159 PRCGKTTLLRDLIRQVSNGNRYMPGVSVGVVDERSEIAGSYQGIPQNDLGI--RTDVLDC 216
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ + + PEV+ VDE+G + HA S+ G L T HG +E+I + P+
Sbjct: 217 CPKAEGMMMLIRSMSPEVVAVDELGDYEDIHAIESVIHCGCKLFATVHGSSIEDIKRKPL 276
Query: 150 LSDLI 154
L L+
Sbjct: 277 LQRLM 281
>gi|228941354|ref|ZP_04103906.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228974286|ref|ZP_04134855.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980879|ref|ZP_04141183.1| Stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|384188264|ref|YP_005574160.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676583|ref|YP_006928954.1| stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|423385698|ref|ZP_17362954.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-2]
gi|423527946|ref|ZP_17504391.1| stage III sporulation protein AA [Bacillus cereus HuB1-1]
gi|452200654|ref|YP_007480735.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228778815|gb|EEM27078.1| Stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|228785336|gb|EEM33346.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818280|gb|EEM64353.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326941973|gb|AEA17869.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401635754|gb|EJS53509.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-2]
gi|402451609|gb|EJV83428.1| stage III sporulation protein AA [Bacillus cereus HuB1-1]
gi|409175712|gb|AFV20017.1| stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|452106047|gb|AGG02987.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 308
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG E++++
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYEDVVRR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|423470413|ref|ZP_17447157.1| stage III sporulation protein AA [Bacillus cereus BAG6O-2]
gi|423558227|ref|ZP_17534529.1| stage III sporulation protein AA [Bacillus cereus MC67]
gi|401191495|gb|EJQ98517.1| stage III sporulation protein AA [Bacillus cereus MC67]
gi|402436542|gb|EJV68572.1| stage III sporulation protein AA [Bacillus cereus BAG6O-2]
Length = 308
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|219854458|ref|YP_002471580.1| hypothetical protein CKR_1115 [Clostridium kluyveri NBRC 12016]
gi|219568182|dbj|BAH06166.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 308
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S + K+V ++D +EIG +P +G R +
Sbjct: 149 PKCGKTTLIRDIVRNISQGIKNVGLTGKKVCVIDERSEIGACFNGMPQLNVGM--RTDIL 206
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + +I A+ + PEVI+ DEIGT + + + GV LI T HG E++
Sbjct: 207 DGCPKSQGIIMAIRSMSPEVIVCDEIGTYKDMDSILTALNSGVNLITTIHGYGTEDLYSR 266
Query: 148 PILSDLI 154
P+ +++
Sbjct: 267 PVFKEIV 273
>gi|206971017|ref|ZP_03231968.1| stage III sporulation protein AA [Bacillus cereus AH1134]
gi|218233741|ref|YP_002368996.1| stage III sporulation protein AA [Bacillus cereus B4264]
gi|228922948|ref|ZP_04086242.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228954479|ref|ZP_04116504.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960461|ref|ZP_04122112.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229047889|ref|ZP_04193465.1| Stage III sporulation protein AA [Bacillus cereus AH676]
gi|229071700|ref|ZP_04204916.1| Stage III sporulation protein AA [Bacillus cereus F65185]
gi|229081453|ref|ZP_04213953.1| Stage III sporulation protein AA [Bacillus cereus Rock4-2]
gi|229111668|ref|ZP_04241218.1| Stage III sporulation protein AA [Bacillus cereus Rock1-15]
gi|229129473|ref|ZP_04258444.1| Stage III sporulation protein AA [Bacillus cereus BDRD-Cer4]
gi|229146768|ref|ZP_04275133.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST24]
gi|229152395|ref|ZP_04280587.1| Stage III sporulation protein AA [Bacillus cereus m1550]
gi|229180473|ref|ZP_04307815.1| Stage III sporulation protein AA [Bacillus cereus 172560W]
gi|229192406|ref|ZP_04319369.1| Stage III sporulation protein AA [Bacillus cereus ATCC 10876]
gi|296504681|ref|YP_003666381.1| stage III sporulation protein AA [Bacillus thuringiensis BMB171]
gi|423412001|ref|ZP_17389121.1| stage III sporulation protein AA [Bacillus cereus BAG3O-2]
gi|423426330|ref|ZP_17403361.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-2]
gi|423432213|ref|ZP_17409217.1| stage III sporulation protein AA [Bacillus cereus BAG4O-1]
gi|423437648|ref|ZP_17414629.1| stage III sporulation protein AA [Bacillus cereus BAG4X12-1]
gi|423503117|ref|ZP_17479709.1| stage III sporulation protein AA [Bacillus cereus HD73]
gi|423582406|ref|ZP_17558517.1| stage III sporulation protein AA [Bacillus cereus VD014]
gi|423585324|ref|ZP_17561411.1| stage III sporulation protein AA [Bacillus cereus VD045]
gi|423630919|ref|ZP_17606666.1| stage III sporulation protein AA [Bacillus cereus VD154]
gi|423640723|ref|ZP_17616341.1| stage III sporulation protein AA [Bacillus cereus VD166]
gi|423650061|ref|ZP_17625631.1| stage III sporulation protein AA [Bacillus cereus VD169]
gi|423657139|ref|ZP_17632438.1| stage III sporulation protein AA [Bacillus cereus VD200]
gi|449091154|ref|YP_007423595.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|206733789|gb|EDZ50960.1| stage III sporulation protein AA [Bacillus cereus AH1134]
gi|218161698|gb|ACK61690.1| stage III sporulation protein AA [Bacillus cereus B4264]
gi|228590983|gb|EEK48839.1| Stage III sporulation protein AA [Bacillus cereus ATCC 10876]
gi|228602897|gb|EEK60376.1| Stage III sporulation protein AA [Bacillus cereus 172560W]
gi|228631003|gb|EEK87640.1| Stage III sporulation protein AA [Bacillus cereus m1550]
gi|228636596|gb|EEK93061.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST24]
gi|228654078|gb|EEL09945.1| Stage III sporulation protein AA [Bacillus cereus BDRD-Cer4]
gi|228671803|gb|EEL27097.1| Stage III sporulation protein AA [Bacillus cereus Rock1-15]
gi|228701868|gb|EEL54354.1| Stage III sporulation protein AA [Bacillus cereus Rock4-2]
gi|228711431|gb|EEL63390.1| Stage III sporulation protein AA [Bacillus cereus F65185]
gi|228723346|gb|EEL74715.1| Stage III sporulation protein AA [Bacillus cereus AH676]
gi|228799225|gb|EEM46191.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228805136|gb|EEM51730.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228836719|gb|EEM82066.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|296325733|gb|ADH08661.1| stage III sporulation protein AA [Bacillus thuringiensis BMB171]
gi|401104069|gb|EJQ12046.1| stage III sporulation protein AA [Bacillus cereus BAG3O-2]
gi|401111077|gb|EJQ18976.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-2]
gi|401116969|gb|EJQ24807.1| stage III sporulation protein AA [Bacillus cereus BAG4O-1]
gi|401120803|gb|EJQ28599.1| stage III sporulation protein AA [Bacillus cereus BAG4X12-1]
gi|401213285|gb|EJR20026.1| stage III sporulation protein AA [Bacillus cereus VD014]
gi|401233967|gb|EJR40453.1| stage III sporulation protein AA [Bacillus cereus VD045]
gi|401264286|gb|EJR70398.1| stage III sporulation protein AA [Bacillus cereus VD154]
gi|401279784|gb|EJR85706.1| stage III sporulation protein AA [Bacillus cereus VD166]
gi|401282479|gb|EJR88378.1| stage III sporulation protein AA [Bacillus cereus VD169]
gi|401289882|gb|EJR95586.1| stage III sporulation protein AA [Bacillus cereus VD200]
gi|402459338|gb|EJV91075.1| stage III sporulation protein AA [Bacillus cereus HD73]
gi|449024911|gb|AGE80074.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 308
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG E++++
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYEDVVRR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|415885462|ref|ZP_11547390.1| stage III sporulation protein AA [Bacillus methanolicus MGA3]
gi|387591131|gb|EIJ83450.1| stage III sporulation protein AA [Bacillus methanolicus MGA3]
Length = 307
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLS---DEF---QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR++S D +V IVD +EI G IP G R+ V
Sbjct: 145 PQTGKTTLLRDIARIISTGNDALGLSASKVGIVDERSEIAGCVKGIPQLTFGN--RIDVL 202
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V++VDEIG E +A A G+ LI T HG L I K
Sbjct: 203 DACPKAEGMMMMIRSMSPDVLVVDEIGREEDALAIMEAVNAGIKLIMTTHGSSLLEIRKR 262
Query: 148 PILSDLI 154
P L ++
Sbjct: 263 PSLKKIL 269
>gi|194016755|ref|ZP_03055368.1| stage III sporulation protein AA [Bacillus pumilus ATCC 7061]
gi|194011361|gb|EDW20930.1| stage III sporulation protein AA [Bacillus pumilus ATCC 7061]
Length = 307
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 6 NVFLLIVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIV 61
+ L + + Y + N +I P GKTT++R+IAR+ S + K+ I+
Sbjct: 122 GIALPFLPYLYDEHWCNTLIIG------PPQTGKTTLLRDIARLASTGTKAIPPKKTGII 175
Query: 62 DTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
D +EI G +P G R+ V + + + ++ + + PEV+IVDEIG +
Sbjct: 176 DERSEIAGCIRGVPQHQFG--HRVDVLDACPKAEGLMMMIRSMSPEVMIVDEIGKSEDVQ 233
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
A GV +I + HG LEN+ K P L L
Sbjct: 234 ALLEAIHAGVTIIVSVHGYSLENVYKRPSLKPL 266
>gi|153953843|ref|YP_001394608.1| stage III sporulation protein AA [Clostridium kluyveri DSM 555]
gi|146346724|gb|EDK33260.1| Predicted stage III sporulation protein AA [Clostridium kluyveri
DSM 555]
Length = 305
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S + K+V ++D +EIG +P +G R +
Sbjct: 146 PKCGKTTLIRDIVRNISQGIKNVGLTGKKVCVIDERSEIGACFNGMPQLNVGM--RTDIL 203
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + +I A+ + PEVI+ DEIGT + + + GV LI T HG E++
Sbjct: 204 DGCPKSQGIIMAIRSMSPEVIVCDEIGTYKDMDSILTALNSGVNLITTIHGYGTEDLYSR 263
Query: 148 PILSDLI 154
P+ +++
Sbjct: 264 PVFKEIV 270
>gi|386714784|ref|YP_006181107.1| stage III sporulation protein AA [Halobacillus halophilus DSM 2266]
gi|384074340|emb|CCG45833.1| stage III sporulation protein AA [Halobacillus halophilus DSM 2266]
Length = 325
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++RE+A+ + Q +V IVD +EI +P +G R V +
Sbjct: 145 PHSGKTTLLRELAQRIGSGHQDHRASKVAIVDERSEIAASLRGVPQLDVG--ERTDVMDA 202
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ + + PEV+IVDEIG A+A+A R GV +I + HG + N+ K P
Sbjct: 203 CPKAEGMMMMIRSMSPEVLIVDEIGGVADANAIREATFTGVEVICSIHGTSITNVQKRPS 262
Query: 150 LSDLI 154
+LI
Sbjct: 263 ARELI 267
>gi|229174870|ref|ZP_04302390.1| Stage III sporulation protein AA [Bacillus cereus MM3]
gi|228608538|gb|EEK65840.1| Stage III sporulation protein AA [Bacillus cereus MM3]
Length = 308
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|374708800|ref|ZP_09713234.1| stage III sporulation protein AA [Sporolactobacillus inulinus CASD]
Length = 317
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 72/144 (50%), Gaps = 11/144 (7%)
Query: 18 LYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGDG 71
LY N+ + P GKTT++R++AR++S+ ++ IVD +E+ G
Sbjct: 136 LYQRNRWFSTLLIGA--PQTGKTTMLRDLARLVSEGIPDRYLPSRKTAIVDERSELAGCV 193
Query: 72 D-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 130
D +P + +G R V + + + M+ + + PEV+IVDEIG + A GV
Sbjct: 194 DGVPQNRLGV--RADVMDACPKAEGMMMMIRSMSPEVLIVDEIGGAEDTKALLEALNAGV 251
Query: 131 MLIGTAHGEWLENIIKNPILSDLI 154
++ +AHG + ++ P + LI
Sbjct: 252 AVMASAHGFTFDQLLHRPSIRPLI 275
>gi|153855227|ref|ZP_01996393.1| hypothetical protein DORLON_02407 [Dorea longicatena DSM 13814]
gi|149752226|gb|EDM62157.1| stage III sporulation protein AA [Dorea longicatena DSM 13814]
Length = 317
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 66/130 (50%), Gaps = 15/130 (11%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGDIPHSAIGTAR-----RMQ 85
PG GKTT++R++ R +S+ V +VD +EIGG +G A+ R
Sbjct: 155 PGCGKTTMLRDLIRQISEGNSWIPGLAVGVVDERSEIGG------CYMGVAQNHLGIRTD 208
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
+ + + + MI + + P+VI VDEIGT + HA G ++ T H E +E +
Sbjct: 209 ILDGCPKAEGMIMLIRSMGPQVIAVDEIGTPEDVHAIEYAMHCGCKMLATVHAESMEELR 268
Query: 146 KNPILSDLIG 155
K P+ + +IG
Sbjct: 269 KKPLFNRMIG 278
>gi|423622719|ref|ZP_17598497.1| stage III sporulation protein AA [Bacillus cereus VD148]
gi|401260839|gb|EJR67007.1| stage III sporulation protein AA [Bacillus cereus VD148]
Length = 308
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|365159017|ref|ZP_09355204.1| stage III sporulation protein AA [Bacillus sp. 7_6_55CFAA_CT2]
gi|363626006|gb|EHL77015.1| stage III sporulation protein AA [Bacillus sp. 7_6_55CFAA_CT2]
Length = 308
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG E++++
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYEDVVRR 260
Query: 148 PIL 150
P L
Sbjct: 261 PSL 263
>gi|407706722|ref|YP_006830307.1| stage IV sporulation YqfD [Bacillus thuringiensis MC28]
gi|407384407|gb|AFU14908.1| Stage III sporulation protein AA [Bacillus thuringiensis MC28]
Length = 308
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|229075902|ref|ZP_04208878.1| Stage III sporulation protein AA [Bacillus cereus Rock4-18]
gi|229098666|ref|ZP_04229606.1| Stage III sporulation protein AA [Bacillus cereus Rock3-29]
gi|229117691|ref|ZP_04247061.1| Stage III sporulation protein AA [Bacillus cereus Rock1-3]
gi|423377947|ref|ZP_17355231.1| stage III sporulation protein AA [Bacillus cereus BAG1O-2]
gi|423441067|ref|ZP_17417973.1| stage III sporulation protein AA [Bacillus cereus BAG4X2-1]
gi|423464141|ref|ZP_17440909.1| stage III sporulation protein AA [Bacillus cereus BAG6O-1]
gi|423533483|ref|ZP_17509901.1| stage III sporulation protein AA [Bacillus cereus HuB2-9]
gi|423547498|ref|ZP_17523856.1| stage III sporulation protein AA [Bacillus cereus HuB5-5]
gi|228665783|gb|EEL21255.1| Stage III sporulation protein AA [Bacillus cereus Rock1-3]
gi|228684745|gb|EEL38683.1| Stage III sporulation protein AA [Bacillus cereus Rock3-29]
gi|228707217|gb|EEL59414.1| Stage III sporulation protein AA [Bacillus cereus Rock4-18]
gi|401179219|gb|EJQ86392.1| stage III sporulation protein AA [Bacillus cereus HuB5-5]
gi|401636213|gb|EJS53967.1| stage III sporulation protein AA [Bacillus cereus BAG1O-2]
gi|402417728|gb|EJV50028.1| stage III sporulation protein AA [Bacillus cereus BAG4X2-1]
gi|402420408|gb|EJV52679.1| stage III sporulation protein AA [Bacillus cereus BAG6O-1]
gi|402463702|gb|EJV95402.1| stage III sporulation protein AA [Bacillus cereus HuB2-9]
Length = 308
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|336437972|ref|ZP_08617616.1| hypothetical protein HMPREF0990_00010 [Lachnospiraceae bacterium
1_1_57FAA]
gi|336019390|gb|EGN49115.1| hypothetical protein HMPREF0990_00010 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 162
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSD--EFQK--RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +SD E+ K V +VD +EIGG I + +G R V +
Sbjct: 6 PRCGKTTLLRDLIRQISDGNEYVKGCSVGVVDERSEIGGCYMGIVQNNLGM--RTDVLDC 63
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + MI + + P+V+ VDEIGT + HA + G LI + HG +E + P+
Sbjct: 64 CPKAEGMIMLIRSMSPQVVAVDEIGTAEDIHAIEYAMQCGCKLIASVHGMDMEEAARKPV 123
Query: 150 LSDLI 154
L ++I
Sbjct: 124 LGEMI 128
>gi|229104823|ref|ZP_04235483.1| Stage III sporulation protein AA [Bacillus cereus Rock3-28]
gi|228678540|gb|EEL32757.1| Stage III sporulation protein AA [Bacillus cereus Rock3-28]
Length = 308
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|423604153|ref|ZP_17580046.1| stage III sporulation protein AA [Bacillus cereus VD102]
gi|401245839|gb|EJR52192.1| stage III sporulation protein AA [Bacillus cereus VD102]
Length = 308
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|153816458|ref|ZP_01969126.1| hypothetical protein RUMTOR_02711 [Ruminococcus torques ATCC 27756]
gi|317500219|ref|ZP_07958450.1| stage III sporulation protein AA [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087553|ref|ZP_08336484.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846200|gb|EDK23118.1| stage III sporulation protein AA [Ruminococcus torques ATCC 27756]
gi|316898390|gb|EFV20430.1| stage III sporulation protein AA [Lachnospiraceae bacterium
8_1_57FAA]
gi|330400693|gb|EGG80297.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_46FAA]
Length = 313
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSD--EFQK--RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +SD E+ K V +VD +EIGG I + +G R V +
Sbjct: 157 PRCGKTTLLRDLIRQISDGNEYVKGCSVGVVDERSEIGGCYMGIVQNNLGM--RTDVLDC 214
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + MI + + P+V+ VDEIGT + HA + G LI + HG +E + P+
Sbjct: 215 CPKAEGMIMLIRSMSPQVVAVDEIGTAEDIHAIEYAMQCGCKLIASVHGMDMEEAARKPV 274
Query: 150 LSDLI 154
L ++I
Sbjct: 275 LGEMI 279
>gi|423417881|ref|ZP_17394970.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-1]
gi|401107052|gb|EJQ15009.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-1]
Length = 308
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|423448777|ref|ZP_17425656.1| stage III sporulation protein AA [Bacillus cereus BAG5O-1]
gi|401129371|gb|EJQ37054.1| stage III sporulation protein AA [Bacillus cereus BAG5O-1]
Length = 308
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|42783312|ref|NP_980559.1| stage III sporulation protein AA [Bacillus cereus ATCC 10987]
gi|42739240|gb|AAS43167.1| stage III sporulation protein AA [Bacillus cereus ATCC 10987]
Length = 308
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSTSKIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|229031842|ref|ZP_04187830.1| Stage III sporulation protein AA [Bacillus cereus AH1271]
gi|228729460|gb|EEL80449.1| Stage III sporulation protein AA [Bacillus cereus AH1271]
Length = 308
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASNIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|255280238|ref|ZP_05344793.1| stage III sporulation protein AA [Bryantella formatexigens DSM
14469]
gi|255269329|gb|EET62534.1| stage III sporulation protein AA [Marvinbryantia formatexigens DSM
14469]
Length = 381
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +SD V +VD +EIGG +P + +G R V +
Sbjct: 204 PRCGKTTLLRDLIRQISDGTASFPGVTVGVVDERSEIGGSYLGVPQNDLGI--RTDVLDC 261
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ + P VI VDEIG + A S+ G L+ T HG+ +E++ + P+
Sbjct: 262 CPKAEGMMMLIRAMSPRVIAVDEIGDYRDIRAIESVIHCGCRLLATVHGDSIEDVQRRPL 321
Query: 150 LSDLI 154
L L+
Sbjct: 322 LQKLV 326
>gi|206976251|ref|ZP_03237159.1| stage III sporulation protein AA [Bacillus cereus H3081.97]
gi|217961683|ref|YP_002340253.1| stage III sporulation protein AA [Bacillus cereus AH187]
gi|222097640|ref|YP_002531697.1| stage III sporulation protein aa [Bacillus cereus Q1]
gi|229140927|ref|ZP_04269471.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST26]
gi|229198320|ref|ZP_04325027.1| Stage III sporulation protein AA [Bacillus cereus m1293]
gi|375286201|ref|YP_005106640.1| stage III sporulation protein AA [Bacillus cereus NC7401]
gi|402555673|ref|YP_006596944.1| stage III sporulation protein AA [Bacillus cereus FRI-35]
gi|423354691|ref|ZP_17332316.1| stage III sporulation protein AA [Bacillus cereus IS075]
gi|423373988|ref|ZP_17351327.1| stage III sporulation protein AA [Bacillus cereus AND1407]
gi|423566844|ref|ZP_17543091.1| stage III sporulation protein AA [Bacillus cereus MSX-A12]
gi|423574120|ref|ZP_17550239.1| stage III sporulation protein AA [Bacillus cereus MSX-D12]
gi|206745447|gb|EDZ56846.1| stage III sporulation protein AA [Bacillus cereus H3081.97]
gi|217064201|gb|ACJ78451.1| stage III sporulation protein AA [Bacillus cereus AH187]
gi|221241698|gb|ACM14408.1| stage III sporulation protein AA [Bacillus cereus Q1]
gi|228585199|gb|EEK43310.1| Stage III sporulation protein AA [Bacillus cereus m1293]
gi|228642503|gb|EEK98790.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST26]
gi|358354728|dbj|BAL19900.1| stage III sporulation protein AA [Bacillus cereus NC7401]
gi|401086239|gb|EJP94466.1| stage III sporulation protein AA [Bacillus cereus IS075]
gi|401094803|gb|EJQ02873.1| stage III sporulation protein AA [Bacillus cereus AND1407]
gi|401212689|gb|EJR19432.1| stage III sporulation protein AA [Bacillus cereus MSX-D12]
gi|401215359|gb|EJR22076.1| stage III sporulation protein AA [Bacillus cereus MSX-A12]
gi|401796883|gb|AFQ10742.1| stage III sporulation protein AA [Bacillus cereus FRI-35]
Length = 308
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSTSKIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|229157792|ref|ZP_04285867.1| Stage III sporulation protein AA [Bacillus cereus ATCC 4342]
gi|228625749|gb|EEK82501.1| Stage III sporulation protein AA [Bacillus cereus ATCC 4342]
Length = 308
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|52141303|ref|YP_085526.1| stage III sporulation protein AA [Bacillus cereus E33L]
gi|118479384|ref|YP_896535.1| stage III sporulation protein AA [Bacillus thuringiensis str. Al
Hakam]
gi|196046314|ref|ZP_03113540.1| stage III sporulation protein AA [Bacillus cereus 03BB108]
gi|225866175|ref|YP_002751553.1| stage III sporulation protein AA [Bacillus cereus 03BB102]
gi|229186436|ref|ZP_04313600.1| Stage III sporulation protein AA [Bacillus cereus BGSC 6E1]
gi|301055686|ref|YP_003793897.1| stage III sporulation protein AA [Bacillus cereus biovar anthracis
str. CI]
gi|376268091|ref|YP_005120803.1| Stage III sporulation protein AA [Bacillus cereus F837/76]
gi|51974772|gb|AAU16322.1| stage III sporulation protein AA [Bacillus cereus E33L]
gi|118418609|gb|ABK87028.1| stage III sporulation protein AA [Bacillus thuringiensis str. Al
Hakam]
gi|196022784|gb|EDX61465.1| stage III sporulation protein AA [Bacillus cereus 03BB108]
gi|225790306|gb|ACO30523.1| stage III sporulation protein AA [Bacillus cereus 03BB102]
gi|228597063|gb|EEK54719.1| Stage III sporulation protein AA [Bacillus cereus BGSC 6E1]
gi|300377855|gb|ADK06759.1| stage III sporulation protein AA [Bacillus cereus biovar anthracis
str. CI]
gi|364513891|gb|AEW57290.1| Stage III sporulation protein AA [Bacillus cereus F837/76]
Length = 308
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|423521947|ref|ZP_17498420.1| stage III sporulation protein AA [Bacillus cereus HuA4-10]
gi|401176609|gb|EJQ83804.1| stage III sporulation protein AA [Bacillus cereus HuA4-10]
Length = 308
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|384182023|ref|YP_005567785.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324328107|gb|ADY23367.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 308
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|47569452|ref|ZP_00240133.1| stage III sporulation protein AA [Bacillus cereus G9241]
gi|47553867|gb|EAL12237.1| stage III sporulation protein AA [Bacillus cereus G9241]
Length = 308
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|229019412|ref|ZP_04176235.1| Stage III sporulation protein AA [Bacillus cereus AH1273]
gi|229025656|ref|ZP_04182062.1| Stage III sporulation protein AA [Bacillus cereus AH1272]
gi|423389488|ref|ZP_17366714.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-3]
gi|228735654|gb|EEL86243.1| Stage III sporulation protein AA [Bacillus cereus AH1272]
gi|228741882|gb|EEL92059.1| Stage III sporulation protein AA [Bacillus cereus AH1273]
gi|401641579|gb|EJS59296.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-3]
Length = 308
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 65/123 (52%), Gaps = 9/123 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PIL 150
P L
Sbjct: 261 PSL 263
>gi|228987384|ref|ZP_04147504.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229093252|ref|ZP_04224370.1| Stage III sporulation protein AA [Bacillus cereus Rock3-42]
gi|228690226|gb|EEL44020.1| Stage III sporulation protein AA [Bacillus cereus Rock3-42]
gi|228772356|gb|EEM20802.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 308
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|423550060|ref|ZP_17526387.1| stage III sporulation protein AA [Bacillus cereus ISP3191]
gi|401189676|gb|EJQ96726.1| stage III sporulation protein AA [Bacillus cereus ISP3191]
Length = 308
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|225025911|ref|ZP_03715103.1| hypothetical protein EUBHAL_00147 [Eubacterium hallii DSM 3353]
gi|224956697|gb|EEG37906.1| putative stage III sporulation protein AA [Eubacterium hallii DSM
3353]
Length = 320
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGDIPHSAIG--TARRMQVPE 88
PG GKTT +R+I R+LSD K V +VD +EIG + IG R + +
Sbjct: 167 PGCGKTTYLRDIIRLLSDGTDTITGKNVAVVDERSEIG---NRTREGIGFYLGNRTDLMD 223
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
+ M+ + PE++ DEIG E + A + G L+ T HG +++I P
Sbjct: 224 HCPKAAGMLMMLRTMTPEILAADEIGGEKDIKAMAYVRNCGCRLLMTVHGNSMQDIFARP 283
Query: 149 ILSDLI 154
+L + +
Sbjct: 284 VLGEYL 289
>gi|75763195|ref|ZP_00742959.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74489310|gb|EAO52762.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 208
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 43 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 100
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG E++++
Sbjct: 101 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYEDVVRR 160
Query: 148 PILSDLI 154
P L ++
Sbjct: 161 PSLKAVL 167
>gi|300854289|ref|YP_003779273.1| stage III sporulation protein AA [Clostridium ljungdahlii DSM
13528]
gi|300434404|gb|ADK14171.1| predicted stage III sporulation protein AA [Clostridium ljungdahlii
DSM 13528]
Length = 308
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 73/140 (52%), Gaps = 11/140 (7%)
Query: 22 NKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIP 74
N+II +S P GKTT++R+I R +S + K+V ++D +EIG +P
Sbjct: 138 NEIINTIIIS--PPKCGKTTLVRDIVRNISQGVKNIGLTGKKVSVIDERSEIGACFNGVP 195
Query: 75 HSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 134
+G R + + + + +I A+ + PEVI+ DEIGT + + + G+ LI
Sbjct: 196 QLNVGV--RTDILDGCPKSQGIIMAIRSMSPEVIVCDEIGTYRDMDSIVTALNSGISLII 253
Query: 135 TAHGEWLENIIKNPILSDLI 154
T HG +E++ P+ +++
Sbjct: 254 TIHGYGIEDLYNRPVFKEIV 273
>gi|423612416|ref|ZP_17588277.1| stage III sporulation protein AA [Bacillus cereus VD107]
gi|401246005|gb|EJR52357.1| stage III sporulation protein AA [Bacillus cereus VD107]
Length = 308
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|423541261|ref|ZP_17517652.1| stage III sporulation protein AA [Bacillus cereus HuB4-10]
gi|401172449|gb|EJQ79670.1| stage III sporulation protein AA [Bacillus cereus HuB4-10]
Length = 308
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + + A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRKEDTEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|423483786|ref|ZP_17460476.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-2]
gi|401141337|gb|EJQ48892.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-2]
Length = 308
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSRGVSASKISSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|196034946|ref|ZP_03102353.1| stage III sporulation protein AA [Bacillus cereus W]
gi|195992485|gb|EDX56446.1| stage III sporulation protein AA [Bacillus cereus W]
Length = 308
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|407979685|ref|ZP_11160495.1| stage III sporulation protein AA [Bacillus sp. HYC-10]
gi|407413697|gb|EKF35386.1| stage III sporulation protein AA [Bacillus sp. HYC-10]
Length = 303
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 6 NVFLLIVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIV 61
+ L + + Y + N +I P GKTT++R++AR++S ++ IV
Sbjct: 118 GIALPFLPYLYEKHWCNTLIIG------PPQTGKTTLLRDLARLVSTGTTTISPRKTGIV 171
Query: 62 DTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
D +EI G +P + G R+ V + + + ++ + + PEVIIVDEIG +
Sbjct: 172 DERSEIAGCIRGVPQHSFG--HRIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGKSEDVQ 229
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
A GV +I +AHG LE++ K P L
Sbjct: 230 ALLEAIHAGVTIIVSAHGYSLEDLYKRPSFEPL 262
>gi|30264268|ref|NP_846645.1| stage III sporulation protein AA [Bacillus anthracis str. Ames]
gi|47529711|ref|YP_021060.1| stage III sporulation protein AA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187095|ref|YP_030347.1| stage III sporulation protein AA [Bacillus anthracis str. Sterne]
gi|49480626|ref|YP_038254.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65321579|ref|ZP_00394538.1| COG3854: Uncharacterized protein conserved in bacteria [Bacillus
anthracis str. A2012]
gi|165872983|ref|ZP_02217605.1| stage III sporulation protein AA [Bacillus anthracis str. A0488]
gi|167634531|ref|ZP_02392851.1| stage III sporulation protein AA [Bacillus anthracis str. A0442]
gi|167638567|ref|ZP_02396843.1| stage III sporulation protein AA [Bacillus anthracis str. A0193]
gi|170687461|ref|ZP_02878678.1| stage III sporulation protein AA [Bacillus anthracis str. A0465]
gi|170709034|ref|ZP_02899464.1| stage III sporulation protein AA [Bacillus anthracis str. A0389]
gi|177654810|ref|ZP_02936567.1| stage III sporulation protein AA [Bacillus anthracis str. A0174]
gi|190566110|ref|ZP_03019029.1| stage III sporulation protein AA [Bacillus anthracis str.
Tsiankovskii-I]
gi|218905329|ref|YP_002453163.1| stage III sporulation protein AA [Bacillus cereus AH820]
gi|227816969|ref|YP_002816978.1| stage III sporulation protein AA [Bacillus anthracis str. CDC 684]
gi|228916829|ref|ZP_04080394.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228935516|ref|ZP_04098334.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947910|ref|ZP_04110197.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229123713|ref|ZP_04252908.1| Stage III sporulation protein AA [Bacillus cereus 95/8201]
gi|229602406|ref|YP_002868487.1| stage III sporulation protein AA [Bacillus anthracis str. A0248]
gi|254683957|ref|ZP_05147817.1| stage III sporulation protein AA [Bacillus anthracis str.
CNEVA-9066]
gi|254721792|ref|ZP_05183581.1| stage III sporulation protein AA [Bacillus anthracis str. A1055]
gi|254736305|ref|ZP_05194011.1| stage III sporulation protein AA [Bacillus anthracis str. Western
North America USA6153]
gi|254741343|ref|ZP_05199030.1| stage III sporulation protein AA [Bacillus anthracis str. Kruger B]
gi|254754023|ref|ZP_05206058.1| stage III sporulation protein AA [Bacillus anthracis str. Vollum]
gi|254757894|ref|ZP_05209921.1| stage III sporulation protein AA [Bacillus anthracis str. Australia
94]
gi|386738084|ref|YP_006211265.1| Stage III sporulation protein AA [Bacillus anthracis str. H9401]
gi|421506452|ref|ZP_15953375.1| stage III sporulation protein AA [Bacillus anthracis str. UR-1]
gi|421638274|ref|ZP_16078870.1| stage III sporulation protein AA [Bacillus anthracis str. BF1]
gi|30258913|gb|AAP28131.1| stage III sporulation protein AA [Bacillus anthracis str. Ames]
gi|47504859|gb|AAT33535.1| stage III sporulation protein AA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181022|gb|AAT56398.1| stage III sporulation protein AA [Bacillus anthracis str. Sterne]
gi|49332182|gb|AAT62828.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164711266|gb|EDR16821.1| stage III sporulation protein AA [Bacillus anthracis str. A0488]
gi|167513415|gb|EDR88785.1| stage III sporulation protein AA [Bacillus anthracis str. A0193]
gi|167529983|gb|EDR92718.1| stage III sporulation protein AA [Bacillus anthracis str. A0442]
gi|170126061|gb|EDS94958.1| stage III sporulation protein AA [Bacillus anthracis str. A0389]
gi|170668656|gb|EDT19402.1| stage III sporulation protein AA [Bacillus anthracis str. A0465]
gi|172080471|gb|EDT65557.1| stage III sporulation protein AA [Bacillus anthracis str. A0174]
gi|190563029|gb|EDV16995.1| stage III sporulation protein AA [Bacillus anthracis str.
Tsiankovskii-I]
gi|218535151|gb|ACK87549.1| stage III sporulation protein AA [Bacillus cereus AH820]
gi|227007321|gb|ACP17064.1| stage III sporulation protein AA [Bacillus anthracis str. CDC 684]
gi|228659848|gb|EEL15493.1| Stage III sporulation protein AA [Bacillus cereus 95/8201]
gi|228811897|gb|EEM58231.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824268|gb|EEM70082.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228843016|gb|EEM88099.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229266814|gb|ACQ48451.1| stage III sporulation protein AA [Bacillus anthracis str. A0248]
gi|384387936|gb|AFH85597.1| Stage III sporulation protein AA [Bacillus anthracis str. H9401]
gi|401823445|gb|EJT22592.1| stage III sporulation protein AA [Bacillus anthracis str. UR-1]
gi|403394700|gb|EJY91940.1| stage III sporulation protein AA [Bacillus anthracis str. BF1]
Length = 308
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|196041563|ref|ZP_03108855.1| stage III sporulation protein AA [Bacillus cereus NVH0597-99]
gi|196027551|gb|EDX66166.1| stage III sporulation protein AA [Bacillus cereus NVH0597-99]
Length = 308
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAILEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|302874798|ref|YP_003843431.1| stage III sporulation protein AA [Clostridium cellulovorans 743B]
gi|307690585|ref|ZP_07633031.1| stage III sporulation protein AA [Clostridium cellulovorans 743B]
gi|302577655|gb|ADL51667.1| stage III sporulation protein AA [Clostridium cellulovorans 743B]
Length = 307
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 18/166 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLS---------YFRPGVGKTTVMREIARVLSDEF 54
++N+ L ++ +Y + + ++ L P GKTT++R+I R LSD
Sbjct: 105 IKNIASLNIRMAREIYGCSNSVIEYILRDQGIYNTIIISPPKCGKTTMLRDITRQLSDGI 164
Query: 55 Q------KRVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
+RV ++D +EI +P +G R V + + ++ A+ P++
Sbjct: 165 ADNNVSGRRVCVIDERSEIAACKLGVPEMDVGL--RTDVLDGCPKAIGIMMAIRTLAPDI 222
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
I+ DEIGTE + ++ S GV +I T HG+ +E++ I D+
Sbjct: 223 IVCDEIGTEKDLNSIISACTCGVNIISTIHGQSIEDLYSKGISRDI 268
>gi|228929239|ref|ZP_04092266.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228830529|gb|EEM76139.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 308
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|23099349|ref|NP_692815.1| stage III sporulation protein AA [Oceanobacillus iheyensis HTE831]
gi|22777578|dbj|BAC13850.1| stage III sporulation protein AA (mutants block sporulation after
engulfment) [Oceanobacillus iheyensis HTE831]
Length = 327
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 67/126 (53%), Gaps = 8/126 (6%)
Query: 35 PGVGKTTVMREIARVLSDEFQ-----KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 88
P GKTT++R++ R+++ Q K+V IVD +EI IP +GT R + +
Sbjct: 147 PQSGKTTIIRDLTRMIATIDQPMNRSKKVGIVDERSEIAASLQGIPQHDVGT--RTDIMD 204
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
+ + M+ V + P++I+VDEIGT+ + A GV +I TAH +++ K P
Sbjct: 205 ACPKAEGMMMLVRSMSPDIIVVDEIGTDHDVEALLEAIHTGVTIICTAHANQWDDLNKRP 264
Query: 149 ILSDLI 154
+ LI
Sbjct: 265 SMKRLI 270
>gi|56420943|ref|YP_148261.1| stage III sporulation protein AA [Geobacillus kaustophilus HTA426]
gi|375009488|ref|YP_004983121.1| stage III sporulation protein AA [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448238686|ref|YP_007402744.1| stage III sporulation protein [Geobacillus sp. GHH01]
gi|56380785|dbj|BAD76693.1| stage III sporulation protein AA [Geobacillus kaustophilus HTA426]
gi|359288337|gb|AEV20021.1| Stage III sporulation protein AA [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445207528|gb|AGE22993.1| stage III sporulation protein [Geobacillus sp. GHH01]
Length = 306
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 69/125 (55%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R+ AR++S ++ +V IVD +EI G IP + G R+ V +
Sbjct: 145 PQTGKTTLLRDAARLISSGTRRIPAQKVAIVDERSEIAGCVKGIPQFSFGP--RLDVLDA 202
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ + + P+V+IVDEIG E ++ A A GV + T HG ++++ + P
Sbjct: 203 CPKAEGMMMMIRSMSPDVMIVDEIGREEDSEAVLEAANAGVSVWTTVHGRNIQDVWQRPT 262
Query: 150 LSDLI 154
L ++
Sbjct: 263 LGPVM 267
>gi|402298077|ref|ZP_10817801.1| stage III sporulation protein AA [Bacillus alcalophilus ATCC 27647]
gi|401726721|gb|EJS99937.1| stage III sporulation protein AA [Bacillus alcalophilus ATCC 27647]
Length = 310
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR++S+ +K+ V IVD +EI +P +G R+ V
Sbjct: 151 PQTGKTTLLRDIARLISEGDRKKGIQPLKVGIVDERSEIAASVKGVPQHRLGD--RVDVL 208
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + P+VIIVDEIG E + A GV +I TAHG + ++ +
Sbjct: 209 DGCPKVEGMMMLIRTMSPDVIIVDEIGREEDRIAIEEAMYAGVKVITTAHGHSVHDLKRR 268
Query: 148 PILSDLI 154
P L LI
Sbjct: 269 PALKGLI 275
>gi|389571702|ref|ZP_10161791.1| stage III sporulation protein AA [Bacillus sp. M 2-6]
gi|388428596|gb|EIL86392.1| stage III sporulation protein AA [Bacillus sp. M 2-6]
Length = 307
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 6 NVFLLIVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIV 61
+ L + + Y + N +I P GKTT++R++AR++S ++ IV
Sbjct: 122 GIALPFLPYLYEKHWCNTLIIG------PPQTGKTTLLRDLARLVSTGTTAISPRKTGIV 175
Query: 62 DTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
D +EI G +P + G R+ V + + + ++ + + PEVIIVDEIG +
Sbjct: 176 DERSEIAGCIRGVPQHSFG--HRIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGKSEDVQ 233
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
A GV +I +AHG LE++ K P L
Sbjct: 234 ALLEAIHAGVTIIVSAHGYSLEDLSKRPSFEPL 266
>gi|403386589|ref|ZP_10928646.1| stage III sporulation protein AA [Clostridium sp. JC122]
Length = 251
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R++S+ K V ++D +EI IP IG R V
Sbjct: 89 PKCGKTTILRDICRIVSNGNYTLNLKGKNVSVIDERSEIAACFKGIPQMNIG--ERTDVL 146
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + +I A+ + PEV+I DEIGT + + + GV LI T HG ++++ K
Sbjct: 147 DSCPKSEGIIMAIRSMSPEVVICDEIGTYKDMDSIIAALNSGVKLITTIHGFDIDDLYKR 206
Query: 148 PILSDLI 154
P+ +++
Sbjct: 207 PVFREVM 213
>gi|293115588|ref|ZP_05792179.2| stage III sporulation protein AA [Butyrivibrio crossotus DSM 2876]
gi|292808949|gb|EFF68154.1| stage III sporulation protein AA [Butyrivibrio crossotus DSM 2876]
Length = 303
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 7/112 (6%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR---VVIVDTSNEIGG-DGDIPHSAIGTARRMQVPEPS 90
PG GKTT++R+I R+LSD + R + ++D NEI D IP + +G + + +
Sbjct: 157 PGCGKTTLLRDIIRLLSDGYGNRGFNISVIDERNEISATDLGIPENDVGMRTDVMINNKT 216
Query: 91 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 142
+ +I A+ + PE+I VDEIG++ + + G ++ + H + LE
Sbjct: 217 ---EGIIMALRSMAPEIIAVDEIGSDKDINVLNKAITCGCKILASIHADNLE 265
>gi|433542466|ref|ZP_20498893.1| stage III sporulation protein AA [Brevibacillus agri BAB-2500]
gi|432186277|gb|ELK43751.1| stage III sporulation protein AA [Brevibacillus agri BAB-2500]
Length = 258
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 13 KFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLS--DEFQ--KRVVIVDTSNEIG 68
K L+ K++ +S P GKTT++R++AR LS E+ ++V IVD +E+
Sbjct: 76 KVMPYLFEGGKVLSTLVIS--PPQCGKTTLLRDMARSLSYGSEWSSSRKVGIVDERSELA 133
Query: 69 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 127
G +P +G R V + + M+ + + P+V+IVDE+G + A
Sbjct: 134 GCLQGVPQRDVGP--RTDVLDACPKAAGMMMLIRSMSPDVLIVDEVGRAEDGDAVWEAIH 191
Query: 128 RGVMLIGTAHGEWLENIIKNPILSDLI 154
GV +I +AHG ++ + + P+L +L+
Sbjct: 192 AGVAVICSAHGADIQEVARRPMLGNLV 218
>gi|452856213|ref|YP_007497896.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452080473|emb|CCP22236.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 307
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNE 66
++ F + +N +I P GKTT++R++AR+ S + K+ IVD +E
Sbjct: 127 LIPFLWKENWLNTLIIG------PPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSE 180
Query: 67 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
I G IP + G RR+ V + + + ++ + + P+VIIVDEIG ++ A
Sbjct: 181 IAGCLRGIPQHSFG--RRIDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEA 238
Query: 126 AERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG +++++K P L L
Sbjct: 239 LHAGVSVIVSAHGWNMKDLVKRPSLKML 266
>gi|394992156|ref|ZP_10384948.1| stage III sporulation protein AA [Bacillus sp. 916]
gi|429505855|ref|YP_007187039.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|393806985|gb|EJD68312.1| stage III sporulation protein AA [Bacillus sp. 916]
gi|429487445|gb|AFZ91369.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 307
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNE 66
++ F + +N +I P GKTT++R++AR+ S + K+ IVD +E
Sbjct: 127 LIPFLWKENWLNTLIIG------PPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSE 180
Query: 67 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
I G IP + G RR+ V + + + ++ + + P+VIIVDEIG ++ A
Sbjct: 181 IAGCLRGIPQHSFG--RRIDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEA 238
Query: 126 AERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG +++++K P L L
Sbjct: 239 LHAGVSVIVSAHGWNMKDLVKRPSLKML 266
>gi|423400957|ref|ZP_17378130.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-2]
gi|423478338|ref|ZP_17455053.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-1]
gi|401653947|gb|EJS71490.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-2]
gi|402428500|gb|EJV60597.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-1]
Length = 308
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP G R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGA--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|399053816|ref|ZP_10742615.1| stage III sporulation protein AA [Brevibacillus sp. CF112]
gi|398048593|gb|EJL41065.1| stage III sporulation protein AA [Brevibacillus sp. CF112]
Length = 320
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 9/147 (6%)
Query: 13 KFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLS--DEFQ--KRVVIVDTSNEIG 68
K L+ K++ +S P GKTT++R++AR LS E+ ++V IVD +E+
Sbjct: 138 KVMPYLFEGGKVLSTLVIS--PPQCGKTTLLRDMARSLSYGSEWSSSRKVGIVDERSELA 195
Query: 69 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 127
G +P +G R V + + M+ + + P+V+IVDE+G + A
Sbjct: 196 GCLQGVPQRDVGP--RTDVLDACPKAAGMMMLIRSMSPDVLIVDEVGRAEDGDAVWEAIH 253
Query: 128 RGVMLIGTAHGEWLENIIKNPILSDLI 154
GV +I +AHG ++ + + P+L +L+
Sbjct: 254 AGVAVICSAHGADIQEVARRPMLGNLV 280
>gi|385265443|ref|ZP_10043530.1| ATPase family associated with various cellular activities (AAA)
[Bacillus sp. 5B6]
gi|385149939|gb|EIF13876.1| ATPase family associated with various cellular activities (AAA)
[Bacillus sp. 5B6]
Length = 307
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNE 66
++ F + +N +I P GKTT++R++AR+ S + K+ IVD +E
Sbjct: 127 LIPFLWKENWLNTLIIG------PPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSE 180
Query: 67 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
I G IP + G RR+ V + + + ++ + + P+VIIVDEIG ++ A
Sbjct: 181 IAGCLRGIPQHSFG--RRIDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEA 238
Query: 126 AERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG +++++K P L L
Sbjct: 239 LHAGVSVIVSAHGWNMKDLVKRPSLKML 266
>gi|384266059|ref|YP_005421766.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387899079|ref|YP_006329375.1| stage III sporulation protein AA [Bacillus amyloliquefaciens Y2]
gi|380499412|emb|CCG50450.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387173189|gb|AFJ62650.1| stage III sporulation protein AA [Bacillus amyloliquefaciens Y2]
Length = 307
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNE 66
++ F + +N +I P GKTT++R++AR+ S + K+ IVD +E
Sbjct: 127 LIPFLWKENWLNTLIIG------PPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSE 180
Query: 67 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
I G IP + G RR+ V + + + ++ + + P+VIIVDEIG ++ A
Sbjct: 181 IAGCLRGIPQHSFG--RRIDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEA 238
Query: 126 AERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG +++++K P L L
Sbjct: 239 LHAGVSVIVSAHGWNMKDLVKRPSLKML 266
>gi|375362979|ref|YP_005131018.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|421731034|ref|ZP_16170160.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|371568973|emb|CCF05823.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|407075188|gb|EKE48175.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 307
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNE 66
++ F + +N +I P GKTT++R++AR+ S + K+ IVD +E
Sbjct: 127 LIPFLWKENWLNTLIIG------PPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSE 180
Query: 67 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
I G IP + G RR+ V + + + ++ + + P+VIIVDEIG ++ A
Sbjct: 181 IAGCLRGIPQHSFG--RRVDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEA 238
Query: 126 AERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG +++++K P L L
Sbjct: 239 LHAGVSVIVSAHGWNMKDLVKRPSLKML 266
>gi|423591808|ref|ZP_17567839.1| stage III sporulation protein AA [Bacillus cereus VD048]
gi|401231941|gb|EJR38443.1| stage III sporulation protein AA [Bacillus cereus VD048]
Length = 308
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP G R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|423615466|ref|ZP_17591300.1| stage III sporulation protein AA [Bacillus cereus VD115]
gi|401260003|gb|EJR66176.1| stage III sporulation protein AA [Bacillus cereus VD115]
Length = 308
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP GT R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIAGCVKGIPQYEFGT--RLDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + ++ A GV L +AHG +++ K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVEKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|229168937|ref|ZP_04296654.1| Stage III sporulation protein AA [Bacillus cereus AH621]
gi|228614529|gb|EEK71637.1| Stage III sporulation protein AA [Bacillus cereus AH621]
Length = 308
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP G R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|261417733|ref|YP_003251415.1| stage III sporulation protein AA [Geobacillus sp. Y412MC61]
gi|319767455|ref|YP_004132956.1| stage III sporulation protein AA [Geobacillus sp. Y412MC52]
gi|261374190|gb|ACX76933.1| stage III sporulation protein AA [Geobacillus sp. Y412MC61]
gi|317112321|gb|ADU94813.1| stage III sporulation protein AA [Geobacillus sp. Y412MC52]
Length = 306
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEF----QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R+ AR++S ++V IVD +EI G IP + G R+ V +
Sbjct: 145 PQTGKTTLLRDAARLISSGTGRIPAQKVAIVDERSEIAGCVKGIPQFSFGP--RLDVLDA 202
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ + + P+V+IVDEIG E ++ A A GV + T HG ++++ + P
Sbjct: 203 CPKAEGMMMMIRSMSPDVMIVDEIGREEDSEAVLEAANAGVSVWTTVHGRNIQDVWQRPT 262
Query: 150 LSDLI 154
L ++
Sbjct: 263 LGPVM 267
>gi|154686707|ref|YP_001421868.1| hypothetical protein RBAM_022760 [Bacillus amyloliquefaciens FZB42]
gi|154352558|gb|ABS74637.1| SpoIIIAA [Bacillus amyloliquefaciens FZB42]
Length = 307
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNE 66
++ F + +N +I P GKTT++R++AR+ S + K+ IVD +E
Sbjct: 127 LIPFLWKENWLNTLIIG------PPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSE 180
Query: 67 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
I G IP + G RR+ V + + + ++ + + P+VIIVDEIG ++ A
Sbjct: 181 IAGCLRGIPQHSFG--RRIDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEA 238
Query: 126 AERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG +++++K P L L
Sbjct: 239 LHAGVSVIVSAHGWDMKDLVKRPSLKML 266
>gi|423457622|ref|ZP_17434419.1| stage III sporulation protein AA [Bacillus cereus BAG5X2-1]
gi|401148006|gb|EJQ55499.1| stage III sporulation protein AA [Bacillus cereus BAG5X2-1]
Length = 308
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP G R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGA--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVL 267
>gi|423452500|ref|ZP_17429353.1| stage III sporulation protein AA [Bacillus cereus BAG5X1-1]
gi|401140138|gb|EJQ47695.1| stage III sporulation protein AA [Bacillus cereus BAG5X1-1]
Length = 308
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP G R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGA--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|451346346|ref|YP_007444977.1| stage III sporulation protein AA [Bacillus amyloliquefaciens IT-45]
gi|449850104|gb|AGF27096.1| stage III sporulation protein AA [Bacillus amyloliquefaciens IT-45]
Length = 307
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNE 66
++ F + +N +I P GKTT++R++AR+ S + K+ IVD +E
Sbjct: 127 LIPFLWKENWLNTLIIG------PPQTGKTTLLRDLARLSSTGSKRIPAKKTGIVDERSE 180
Query: 67 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
I G IP + G RR+ V + + + ++ + + P+VIIVDEIG ++ A
Sbjct: 181 IAGCLRGIPQHSFG--RRVDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEA 238
Query: 126 AERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG +++++K P L L
Sbjct: 239 LHAGVSVIVSAHGWNMKDLVKRPSLKML 266
>gi|297529425|ref|YP_003670700.1| stage III sporulation protein AA [Geobacillus sp. C56-T3]
gi|297252677|gb|ADI26123.1| stage III sporulation protein AA [Geobacillus sp. C56-T3]
Length = 306
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 68/125 (54%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R+ AR++S ++ +V IVD +EI G IP + G R+ V +
Sbjct: 145 PQTGKTTLLRDAARLISSGTRRIPAQKVAIVDERSEIAGCVKGIPQFSFGP--RLDVLDA 202
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ + P+V+IVDEIG E ++ A A GV + T HG ++++ + P
Sbjct: 203 CPKAEGMMMMIRAMSPDVMIVDEIGREEDSEAVLEAANAGVSVWTTVHGRNIQDVWQRPT 262
Query: 150 LSDLI 154
L ++
Sbjct: 263 LGPVM 267
>gi|157692942|ref|YP_001487404.1| stage III sporulation protein AA [Bacillus pumilus SAFR-032]
gi|157681700|gb|ABV62844.1| stage III sporulation protein AA [Bacillus pumilus SAFR-032]
Length = 307
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 6 NVFLLIVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIV 61
+ L + + Y + N +I P GKTT++R+IAR+ S + K+ I+
Sbjct: 122 GIALPFLPYLYDEHWCNTLIIG------PPQTGKTTLLRDIARLASTGTKAIPPKKTGII 175
Query: 62 DTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
D +EI G +P G R+ V + + + ++ + + PEV+IVDEIG +
Sbjct: 176 DERSEIAGCIRGVPQHQFG--HRVDVLDACPKAEGLMMMIRSMSPEVMIVDEIGKSEDVQ 233
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
A GV +I + HG LE++ K P L L
Sbjct: 234 ALLEAIHAGVSIIVSVHGYSLEDVYKRPSLKPL 266
>gi|291542877|emb|CBL15987.1| Uncharacterized protein conserved in bacteria [Ruminococcus bromii
L2-63]
Length = 316
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIP-HSAIGTARRMQVPEPSLQH 93
P GKTTV+R++AR+LS + +K V ++D E+ G + IG V + +
Sbjct: 167 PCSGKTTVLRDLARLLSTKGKKNVALIDERGELAGTASGKFQNDIGMC---DVYDSYNKS 223
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 137
+ M+ A+ + PE+II DEIG++ + +A GV +I + H
Sbjct: 224 EAMLHAIRSMAPEIIICDEIGSKEDIYAVEKSINCGVRIISSTH 267
>gi|333370541|ref|ZP_08462536.1| stage III sporulation protein AA [Desmospora sp. 8437]
gi|332977550|gb|EGK14320.1| stage III sporulation protein AA [Desmospora sp. 8437]
Length = 321
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 35 PGVGKTTVMREIARVLSDE---FQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPS 90
P GKTT++R++ R++S ++V +VD +EI G + +P +G R V +
Sbjct: 159 PQCGKTTLLRDLTRIVSSGETIPSRKVGVVDERSEIAGCVEGVPQHDVGP--RTDVLDGC 216
Query: 91 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 150
+ + M+ + + PE+++VDEIG + A GV L TAHG +E + + P +
Sbjct: 217 PKAEGMMMLIRSMSPELLVVDEIGRREDGEAVFEAVHAGVSLFTTAHGSSMEEVCRRPGI 276
Query: 151 SDLI 154
+ L+
Sbjct: 277 AQLV 280
>gi|160938291|ref|ZP_02085646.1| hypothetical protein CLOBOL_03187 [Clostridium bolteae ATCC
BAA-613]
gi|158438664|gb|EDP16421.1| hypothetical protein CLOBOL_03187 [Clostridium bolteae ATCC
BAA-613]
Length = 357
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR----------VVIVDTSNEIGGD-GDIPHSAIGTARR 83
P GKTT++R++ R +SD + + V +VD +E+G +P + +G R
Sbjct: 184 PRCGKTTLLRDMIRQVSDGPRTQRSGRRITGVSVGVVDERSELGACYQGVPQNDLGM--R 241
Query: 84 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 143
V + + + M+ V + P+VI VDEIG+ + A + G L T HG LE+
Sbjct: 242 TDVLDCCPKSQGMMMLVRSMAPQVIAVDEIGSREDVQAIEYVRNCGCSLAATIHGSSLED 301
Query: 144 IIKNPILSDLI 154
I++ P + +LI
Sbjct: 302 IMQKPAVGELI 312
>gi|288870190|ref|ZP_06113246.2| stage III sporulation protein AA [Clostridium hathewayi DSM 13479]
gi|288868079|gb|EFD00378.1| stage III sporulation protein AA [Clostridium hathewayi DSM 13479]
Length = 356
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 9/142 (6%)
Query: 18 LYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKR----VVIVDTSNEIGGD-GD 72
LY +I+ +S P GKTT++R++ R +S+ + V +VD +EIG
Sbjct: 167 LYDSEEILHTLIIS--PPRCGKTTLLRDLIRQISNGTEAHPGMTVGVVDERSEIGACYQG 224
Query: 73 IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVML 132
IP + +G R + + + + M+ + P VI VDEIG+ + A + G L
Sbjct: 225 IPQNELGI--RTDILDCCPKARGMMMLIRTMSPRVIAVDEIGSREDLEAVEYVMNCGCKL 282
Query: 133 IGTAHGEWLENIIKNPILSDLI 154
I T HG ++++ + P+L L+
Sbjct: 283 IATVHGSSIDDLKQKPVLRRLV 304
>gi|423489380|ref|ZP_17466062.1| stage III sporulation protein AA [Bacillus cereus BtB2-4]
gi|423495103|ref|ZP_17471747.1| stage III sporulation protein AA [Bacillus cereus CER057]
gi|423498103|ref|ZP_17474720.1| stage III sporulation protein AA [Bacillus cereus CER074]
gi|423598486|ref|ZP_17574486.1| stage III sporulation protein AA [Bacillus cereus VD078]
gi|401151196|gb|EJQ58648.1| stage III sporulation protein AA [Bacillus cereus CER057]
gi|401161390|gb|EJQ68757.1| stage III sporulation protein AA [Bacillus cereus CER074]
gi|401236756|gb|EJR43213.1| stage III sporulation protein AA [Bacillus cereus VD078]
gi|402431616|gb|EJV63680.1| stage III sporulation protein AA [Bacillus cereus BtB2-4]
Length = 308
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP G R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGISASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|358062401|ref|ZP_09149047.1| stage III sporulation protein AA [Clostridium hathewayi WAL-18680]
gi|356699530|gb|EHI61044.1| stage III sporulation protein AA [Clostridium hathewayi WAL-18680]
Length = 320
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR----VVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +S+ K V ++D +EIG +P + +G R + +
Sbjct: 160 PRCGKTTLLRDMIRQISNGTGKEPGMTVGVIDERSEIGACYQGVPQNELGI--RTDILDC 217
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ + P VI VDEIG+ + A + G LI T HG +E+I + P+
Sbjct: 218 CPKARGMMMLIRTMSPRVIAVDEIGSREDLEAMEYVMNCGCKLIATVHGNSVEDIKQKPV 277
Query: 150 LSDLI 154
L L+
Sbjct: 278 LRKLV 282
>gi|225570621|ref|ZP_03779646.1| hypothetical protein CLOHYLEM_06723 [Clostridium hylemonae DSM
15053]
gi|225160634|gb|EEG73253.1| hypothetical protein CLOHYLEM_06723 [Clostridium hylemonae DSM
15053]
Length = 316
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGDIPHSAIGTAR-----RMQ 85
P GKTT++R++ R +SD V +VD +EIGG +G A+ R
Sbjct: 153 PRCGKTTLLRDMIRQISDGNAWVKGMSVGVVDERSEIGG------CYMGVAQNHLGMRTD 206
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
V + + + MI + + PEV+ VDEIG + HA G L+ + HG +E I
Sbjct: 207 VLDCCPKAEGMIMLIRSMSPEVVAVDEIGAAEDVHAVEYAMHCGCKLLASIHGASMEEIR 266
Query: 146 KNPILSDLI 154
K P+L L+
Sbjct: 267 KKPLLGRLV 275
>gi|229061884|ref|ZP_04199213.1| Stage III sporulation protein AA [Bacillus cereus AH603]
gi|228717397|gb|EEL69066.1| Stage III sporulation protein AA [Bacillus cereus AH603]
Length = 308
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP G R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|228992941|ref|ZP_04152865.1| Stage III sporulation protein AA [Bacillus pseudomycoides DSM
12442]
gi|228766798|gb|EEM15437.1| Stage III sporulation protein AA [Bacillus pseudomycoides DSM
12442]
Length = 308
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S + +V IVD +EI G IP G +R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVRSHEIPSCKVGIVDERSEIAGCVKGIPQYEFG--QRVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRVEDSEAIMEAVHAGVQLFISAHGFSFDDVMKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVM 267
>gi|229135016|ref|ZP_04263821.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST196]
gi|228648401|gb|EEL04431.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST196]
Length = 308
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP G R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|169335050|ref|ZP_02862243.1| hypothetical protein ANASTE_01456 [Anaerofustis stercorihominis DSM
17244]
gi|169257788|gb|EDS71754.1| stage III sporulation protein AA [Anaerofustis stercorihominis DSM
17244]
Length = 304
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 78/159 (49%), Gaps = 14/159 (8%)
Query: 1 MLRLRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLS 51
++ LRN+ L ++ + + ++ ++ L+ P VGKTT++R+I+RV+S
Sbjct: 107 VIGLRNINSLNIRISRQIIGASNLVLNYILNKGEVYNTLIISPPKVGKTTLLRDISRVIS 166
Query: 52 ----DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
D KRV IVD EI D + + + V E + M V PEV
Sbjct: 167 TNKGDFVGKRVCIVDERKEIASLHD-GVNELNIGDKTDVLEGINKSDGMNMLVRAMSPEV 225
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
II DEIG + A + GV +I +AHG+ +++I++
Sbjct: 226 IITDEIGKIDDISALENSVLSGVKVISSAHGKDMKDILR 264
>gi|163941952|ref|YP_001646836.1| sporulation stage III protein AA [Bacillus weihenstephanensis
KBAB4]
gi|423518898|ref|ZP_17495379.1| stage III sporulation protein AA [Bacillus cereus HuA2-4]
gi|423669780|ref|ZP_17644809.1| stage III sporulation protein AA [Bacillus cereus VDM034]
gi|163864149|gb|ABY45208.1| Sporulation stage III protein AA [Bacillus weihenstephanensis
KBAB4]
gi|401159953|gb|EJQ67332.1| stage III sporulation protein AA [Bacillus cereus HuA2-4]
gi|401298907|gb|EJS04507.1| stage III sporulation protein AA [Bacillus cereus VDM034]
Length = 308
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP G R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|229013411|ref|ZP_04170548.1| Stage III sporulation protein AA [Bacillus mycoides DSM 2048]
gi|423368248|ref|ZP_17345680.1| stage III sporulation protein AA [Bacillus cereus VD142]
gi|423512308|ref|ZP_17488839.1| stage III sporulation protein AA [Bacillus cereus HuA2-1]
gi|423660956|ref|ZP_17636125.1| stage III sporulation protein AA [Bacillus cereus VDM022]
gi|423674015|ref|ZP_17648954.1| stage III sporulation protein AA [Bacillus cereus VDM062]
gi|228747823|gb|EEL97689.1| Stage III sporulation protein AA [Bacillus mycoides DSM 2048]
gi|401080999|gb|EJP89279.1| stage III sporulation protein AA [Bacillus cereus VD142]
gi|401300997|gb|EJS06586.1| stage III sporulation protein AA [Bacillus cereus VDM022]
gi|401309566|gb|EJS14899.1| stage III sporulation protein AA [Bacillus cereus VDM062]
gi|402449279|gb|EJV81116.1| stage III sporulation protein AA [Bacillus cereus HuA2-1]
Length = 308
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP G R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCVKGIPQYDFGV--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG + ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYDDVVKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLQAVL 267
>gi|399889154|ref|ZP_10775031.1| stage III sporulation protein AA [Clostridium arbusti SL206]
Length = 306
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVP 87
P GKTT++R+I R +S+ K V ++D +EI D IP +G R V
Sbjct: 147 PKCGKTTLIRDITRNISNGMDNTLLKGKNVCVIDERSEICASSDGIPQLNVGI--RTDVM 204
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + ++ A+ + P+VI+ DEIGT + + + GV LI T HG +E++
Sbjct: 205 DNCPKSQGIMMAIRSMAPDVIVCDEIGTYDDVKSILAALNCGVNLITTIHGFGIEDLNSR 264
Query: 148 PILSDLI 154
+ D+I
Sbjct: 265 DVFKDVI 271
>gi|417961837|ref|ZP_12604170.1| Stage III sporulation protein AA, partial [Candidatus Arthromitus
sp. SFB-2]
gi|380332103|gb|EIA23008.1| Stage III sporulation protein AA, partial [Candidatus Arthromitus
sp. SFB-2]
Length = 186
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 13 KFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEI 67
KF +Y +I+ +S P GKTT++R++++++S+ +V ++D +EI
Sbjct: 15 KFINYIYKGGEILNTLIIS--PPKCGKTTLLRDLSKIISNGDSPLNRGFKVSVIDERSEI 72
Query: 68 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 126
IP +G R V + L+ K +I A+ + PEVII DEIGT + +
Sbjct: 73 AASFRGIPQLDVGI--RTDVYDNCLKSKGIILAIRSMAPEVIICDEIGTREDFESVLIAY 130
Query: 127 ERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I T HG E+ +S+L
Sbjct: 131 NSGVSIISTIHGSSEEDFYNKLRMSNL 157
>gi|398817112|ref|ZP_10575743.1| stage III sporulation protein AA [Brevibacillus sp. BC25]
gi|398030914|gb|EJL24313.1| stage III sporulation protein AA [Brevibacillus sp. BC25]
Length = 320
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 75/147 (51%), Gaps = 9/147 (6%)
Query: 13 KFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLS--DEFQ--KRVVIVDTSNEIG 68
K L+ K++ +S P GKTT++R++AR +S E+ ++V IVD +E+
Sbjct: 138 KVMPYLFEDGKLLNTLLIS--PPQCGKTTLLRDMARTISYGSEWSSSRKVGIVDERSELA 195
Query: 69 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 127
G +P +G R V + + M+ + + P+V+IVDE+G + A
Sbjct: 196 GCLQGVPQRDVGP--RTDVLDACPKAAGMMMMIRSMSPDVLIVDEVGRTEDGDAVWEAIH 253
Query: 128 RGVMLIGTAHGEWLENIIKNPILSDLI 154
GV +I +AHG ++ + + P+L LI
Sbjct: 254 AGVAVICSAHGASVKEVAERPMLGKLI 280
>gi|159488481|ref|XP_001702238.1| hypothetical protein CHLREDRAFT_154234 [Chlamydomonas reinhardtii]
gi|158271275|gb|EDO97098.1| predicted protein [Chlamydomonas reinhardtii]
Length = 205
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 118 EAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL-GDEEARARRCQKSI 176
EA A RSI++RGVML+ TAHG L +I+ NP L+ L+GG+ TV L A K+
Sbjct: 2 EAEAARSISQRGVMLVATAHGTDLRSIMGNPDLNSLVGGMQTVILGDAAAGAAHGGAKTR 61
Query: 177 LERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRG 212
ER+ PTF + SVD LL G
Sbjct: 62 TERRGEPTFRLRLR---------PDVAASVDALLGG 88
>gi|311069045|ref|YP_003973968.1| stage III sporulation protein AA [Bacillus atrophaeus 1942]
gi|419820311|ref|ZP_14343922.1| stage III sporulation protein AA [Bacillus atrophaeus C89]
gi|310869562|gb|ADP33037.1| stage III sporulation protein AA [Bacillus atrophaeus 1942]
gi|388475463|gb|EIM12175.1| stage III sporulation protein AA [Bacillus atrophaeus C89]
Length = 307
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 13/148 (8%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNE 66
+V F + +N +I P GKTT++R++AR+ S K + IVD +E
Sbjct: 127 LVPFLFKENWLNTLIIG------PPQTGKTTLLRDLARLSSSGINKIPAKKTGIVDERSE 180
Query: 67 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
I G IP G +R+ V + + + ++ + + PEVIIVDEIG ++ A
Sbjct: 181 IAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGRMEDSEAILEA 238
Query: 126 AERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG + +++K P L L
Sbjct: 239 LHAGVSVIVSAHGWTISDLMKRPSLKLL 266
>gi|384456035|ref|YP_005668630.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|418015948|ref|ZP_12655513.1| stage 3 sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|345506283|gb|EGX28577.1| stage 3 sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984378|dbj|BAK80054.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Yit]
Length = 271
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 13 KFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEI 67
KF +Y +I+ +S P GKTT++R++++++S+ +V ++D +EI
Sbjct: 100 KFINYIYKGGEILNTLIIS--PPKCGKTTLLRDLSKIISNGDSPLNRGFKVSVIDERSEI 157
Query: 68 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 126
IP +G R V + L+ K +I A+ + PEVII DEIGT + +
Sbjct: 158 AASFRGIPQLDVGI--RTDVYDNCLKSKGIILAIRSMAPEVIICDEIGTREDFESVLIAY 215
Query: 127 ERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I T HG E+ +S+L
Sbjct: 216 NSGVSIISTIHGSSEEDFYNKLRMSNL 242
>gi|125973363|ref|YP_001037273.1| stage III sporulation protein spoIIIAA [Clostridium thermocellum
ATCC 27405]
gi|256005469|ref|ZP_05430432.1| stage III sporulation protein AA [Clostridium thermocellum DSM
2360]
gi|281417563|ref|ZP_06248583.1| stage III sporulation protein AA [Clostridium thermocellum JW20]
gi|385778725|ref|YP_005687890.1| stage III sporulation protein AA [Clostridium thermocellum DSM
1313]
gi|419722089|ref|ZP_14249238.1| stage III sporulation protein AA [Clostridium thermocellum AD2]
gi|419724836|ref|ZP_14251893.1| stage III sporulation protein AA [Clostridium thermocellum YS]
gi|125713588|gb|ABN52080.1| stage III sporulation protein AA [Clostridium thermocellum ATCC
27405]
gi|255990609|gb|EEU00728.1| stage III sporulation protein AA [Clostridium thermocellum DSM
2360]
gi|281408965|gb|EFB39223.1| stage III sporulation protein AA [Clostridium thermocellum JW20]
gi|316940405|gb|ADU74439.1| stage III sporulation protein AA [Clostridium thermocellum DSM
1313]
gi|380771725|gb|EIC05588.1| stage III sporulation protein AA [Clostridium thermocellum YS]
gi|380781843|gb|EIC11492.1| stage III sporulation protein AA [Clostridium thermocellum AD2]
Length = 336
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 9/111 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +SD ++ +V +VD +EI +P + +GT R V
Sbjct: 176 PQCGKTTLLRDITRAISDGVEEMGFKGVKVGVVDERSEIAACYKGVPQNRVGT--RTDVL 233
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
+ + MI + + P+VI+ DEIG + + A + GV +I TAHG
Sbjct: 234 DACPKQIGMIMMLRSMSPDVIVTDEIGNKGDKDALIQVLNAGVKVISTAHG 284
>gi|357051938|ref|ZP_09113056.1| stage III sporulation protein AA [Clostridium clostridioforme
2_1_49FAA]
gi|355387206|gb|EHG34232.1| stage III sporulation protein AA [Clostridium clostridioforme
2_1_49FAA]
Length = 357
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR----------VVIVDTSNEIGGD-GDIPHSAIGTARR 83
P GKTT++R+I R +SD + + V +VD +E+G +P + +G R
Sbjct: 184 PRCGKTTLLRDIIRQVSDGPRTQRAGRRIPGVSVGVVDERSELGACYQGVPQNDLGM--R 241
Query: 84 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 143
+ + + + M+ V + P+VI VDEIG+ + A + G L T HG LE+
Sbjct: 242 TDILDCCPKSQGMMMLVRSMAPQVIAVDEIGSREDVRAIEYVRNCGCSLAATIHGSSLED 301
Query: 144 IIKNPILSDLI 154
I++ P + +LI
Sbjct: 302 IMQKPAVGELI 312
>gi|342732644|ref|YP_004771483.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|417959181|ref|ZP_12602037.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-1]
gi|417965028|ref|ZP_12606647.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-4]
gi|417968209|ref|ZP_12609250.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-co]
gi|418372898|ref|ZP_12964990.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-mouse-SU]
gi|342330099|dbj|BAK56741.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|380334058|gb|EIA24534.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-1]
gi|380339205|gb|EIA27984.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-4]
gi|380340147|gb|EIA28776.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-co]
gi|380342567|gb|EIA31012.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-mouse-SU]
Length = 266
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 13 KFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEI 67
KF +Y +I+ +S P GKTT++R++++++S+ +V ++D +EI
Sbjct: 95 KFINYIYKGGEILNTLIIS--PPKCGKTTLLRDLSKIISNGDSPLNRGFKVSVIDERSEI 152
Query: 68 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 126
IP +G R V + L+ K +I A+ + PEVII DEIGT + +
Sbjct: 153 AASFRGIPQLDVGI--RTDVYDNCLKSKGIILAIRSMAPEVIICDEIGTREDFESVLIAY 210
Query: 127 ERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I T HG E+ +S+L
Sbjct: 211 NSGVSIISTIHGSSEEDFYNKLRMSNL 237
>gi|15615360|ref|NP_243663.1| mutants block sporulation after engulfment [Bacillus halodurans
C-125]
gi|10175418|dbj|BAB06516.1| mutants block sporulation after engulfment [Bacillus halodurans
C-125]
Length = 309
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 70/127 (55%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR++S + ++ V IVD +EI +P +G R+ V
Sbjct: 150 PQSGKTTLLRDLARLVSVGWSRKGIPPLKVGIVDERSEIAAAVKGVPQHELGM--RVDVL 207
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + + A + GV ++ TAHG LE + K
Sbjct: 208 DGCPKAEGMMMMIRSMSPDVLIVDEIGRKEDCVAIQEALHAGVKVMTTAHGYELEEVSKR 267
Query: 148 PILSDLI 154
P + +L+
Sbjct: 268 PAIRELL 274
>gi|228998985|ref|ZP_04158567.1| Stage III sporulation protein AA [Bacillus mycoides Rock3-17]
gi|229006532|ref|ZP_04164170.1| Stage III sporulation protein AA [Bacillus mycoides Rock1-4]
gi|228754718|gb|EEM04125.1| Stage III sporulation protein AA [Bacillus mycoides Rock1-4]
gi|228760602|gb|EEM09566.1| Stage III sporulation protein AA [Bacillus mycoides Rock3-17]
Length = 308
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S + +V IVD +EI G IP G R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVRSHEIPSCKVGIVDERSEIAGCVKGIPQYEFGP--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDVLIVDEIGRVEDSEAIMEAVHAGVQLFISAHGFSFDDVMKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVM 267
>gi|89099238|ref|ZP_01172116.1| stage III sporulation protein AA [Bacillus sp. NRRL B-14911]
gi|89086084|gb|EAR65207.1| stage III sporulation protein AA [Bacillus sp. NRRL B-14911]
Length = 356
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR++S ++ IVD +EI G IP G R+ V
Sbjct: 192 PQTGKTTLLRDIARIVSSGAANPAIAAQKAGIVDERSEIAGSVSGIPQMTFGP--RVDVL 249
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V++VDEIG + + A G+ L+ T HG E I
Sbjct: 250 DACPKAEGMMMMIRSMSPDVLLVDEIGRQEDGEAIMEAVHAGIKLMMTTHGRSWEEIKNR 309
Query: 148 PILSDLI 154
P L ++
Sbjct: 310 PTLKQIL 316
>gi|404330166|ref|ZP_10970614.1| stage III sporulation protein AA [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 315
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 18/162 (11%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDE 53
RLR+V V+ + + D+ R P GKTT++R++AR +S+
Sbjct: 110 RLRDVAFFNVRIARQKIGAGRPLIDYLYQDHRWLSTLFIGAPQTGKTTLLRDLARFISNG 169
Query: 54 FQKRVV------IVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPE 106
+R + I+D +EI G G +P + +G R V + + + M+ + + P
Sbjct: 170 LPERGIPGEKTGIIDERSEIAGCVGGVPQNDVGP--RTDVLDACPKAEGMMMMIRSMSPG 227
Query: 107 VIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
V+ VDEIG + A GV ++ +AH L+ + K P
Sbjct: 228 VLAVDEIGGREDMDALVEALNAGVTVLASAHAGSLDELRKRP 269
>gi|255100207|ref|ZP_05329184.1| stage III sporulation protein AA [Clostridium difficile QCD-63q42]
Length = 322
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 87
P GKTT++R+I R LS+ + +V +VD NEI G +P +G R +
Sbjct: 163 PQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGSYLGVPQMDVGI--RTDII 220
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
E + + + + P VI+ DEIG+E E A + G+ LI T HG+ +E+I
Sbjct: 221 ETCPKDLGITMLLRSMSPNVIVTDEIGSEKEIKALYTALNGGIGLITTVHGDSIEDI 277
>gi|347542681|ref|YP_004857318.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985717|dbj|BAK81392.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 280
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 10/147 (6%)
Query: 13 KFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEI 67
KF +Y +I+ +S P GKTT++R++++++S+ +V I+D +EI
Sbjct: 109 KFINHIYKGGEILNTLIIS--PPKCGKTTLLRDLSKIISNGDSPLNRGFKVSIIDERSEI 166
Query: 68 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 126
+P IG R + + L+ K +I A+ + PEVI+ DEIGT + +
Sbjct: 167 AASFRGVPQLDIGI--RTDIYDNCLKSKGIILAIRSMAPEVIVCDEIGTREDFESILVAY 224
Query: 127 ERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I T HG E+ +S+L
Sbjct: 225 NSGVSIISTIHGNSEEDFYNKLRMSNL 251
>gi|229086768|ref|ZP_04218932.1| Stage III sporulation protein AA [Bacillus cereus Rock3-44]
gi|228696543|gb|EEL49364.1| Stage III sporulation protein AA [Bacillus cereus Rock3-44]
Length = 308
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S R V IVD +EI G IP G R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVYSREIPSCKVGIVDERSEIAGCVKGIPQYEFGP--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG ++ A GV L +AHG ++++K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRMEDSEAIMEAVHAGVQLFISAHGFSFDDVMKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVM 267
>gi|302387582|ref|YP_003823404.1| stage III sporulation protein AA [Clostridium saccharolyticum WM1]
gi|302198210|gb|ADL05781.1| stage III sporulation protein AA [Clostridium saccharolyticum WM1]
Length = 335
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +S D V +VD +EIG +P + +G R + +
Sbjct: 161 PRCGKTTLLRDMIRQVSNGTEDHTGLTVGVVDERSEIGACYQGVPQNELGI--RTDILDC 218
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ K M+ + P VI VDEIG+ + A + G LI T HG ++++ + P+
Sbjct: 219 CPKAKGMMMLIRTMSPRVIAVDEIGSREDLEAMEYVMNCGCKLIATVHGNSIDDLKQKPV 278
Query: 150 LSDLI 154
L L+
Sbjct: 279 LRKLV 283
>gi|225573674|ref|ZP_03782429.1| hypothetical protein RUMHYD_01870 [Blautia hydrogenotrophica DSM
10507]
gi|225038967|gb|EEG49213.1| stage III sporulation protein AA [Blautia hydrogenotrophica DSM
10507]
Length = 311
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +S+ + V +VD +EI G I + +G R V +
Sbjct: 158 PRCGKTTLLRDLIRQISNGTSSCPGRTVGVVDERSEIAGCYQGIAQNDVGI--RTDVLDG 215
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ + + P+V+ VDE+G + HA S+ G L+ T HG LE++ + P+
Sbjct: 216 CPKAEGMMMLIRSMAPQVVAVDELGDYEDIHAIESVVHCGCKLLATVHGNSLEDLRRKPL 275
Query: 150 LSDLI 154
L+
Sbjct: 276 FQRLM 280
>gi|226311909|ref|YP_002771803.1| stage III sporulation protein AA [Brevibacillus brevis NBRC 100599]
gi|226094857|dbj|BAH43299.1| stage III sporulation protein AA [Brevibacillus brevis NBRC 100599]
Length = 320
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R+IAR +S ++V IVD +E+ G +P +G R V +
Sbjct: 158 PQCGKTTLLRDIARTISYGSECSSSRKVGIVDERSELAGCLQGVPQRDVGP--RTDVLDA 215
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ M+ + + P+V+IVDE+G + A GV +I +AHG ++ + + P+
Sbjct: 216 CPKAVGMMMLIRSMSPDVLIVDEVGRAEDGDAVWEAIHAGVAVICSAHGASVKEVAERPM 275
Query: 150 LSDLI 154
L LI
Sbjct: 276 LGKLI 280
>gi|308174238|ref|YP_003920943.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens DSM 7]
gi|384160096|ref|YP_005542169.1| stage III sporulation protein AA [Bacillus amyloliquefaciens TA208]
gi|384165021|ref|YP_005546400.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens LL3]
gi|384169160|ref|YP_005550538.1| stage III sporulation protein AA [Bacillus amyloliquefaciens XH7]
gi|307607102|emb|CBI43473.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens DSM 7]
gi|328554184|gb|AEB24676.1| stage III sporulation protein AA [Bacillus amyloliquefaciens TA208]
gi|328912576|gb|AEB64172.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens LL3]
gi|341828439|gb|AEK89690.1| stage III sporulation protein AA [Bacillus amyloliquefaciens XH7]
Length = 307
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 13/148 (8%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNE 66
++ F + +N +I P GKTT++R++AR+ S + K+ I+D +E
Sbjct: 127 LIPFLWKENWLNTLIIG------PPQTGKTTLLRDLARLSSTGSKRIPAKKTGIIDERSE 180
Query: 67 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
I G IP + G RR+ V + + + ++ + + P+V+IVDEIG ++ A
Sbjct: 181 IAGCLRGIPQHSFG--RRVDVLDACPKAEGLMMMIRSMSPDVMIVDEIGRIEDSEALMEA 238
Query: 126 AERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG +++++K P L L
Sbjct: 239 LHAGVSVIVSAHGWNMKDLVKRPSLKML 266
>gi|126698788|ref|YP_001087685.1| stage III sporulation protein AA [Clostridium difficile 630]
gi|255306096|ref|ZP_05350268.1| stage III sporulation protein AA [Clostridium difficile ATCC 43255]
gi|423090770|ref|ZP_17079056.1| stage III sporulation protein AA [Clostridium difficile
70-100-2010]
gi|115250225|emb|CAJ68046.1| Stage III sporulation protein AA [Clostridium difficile 630]
gi|357555885|gb|EHJ37507.1| stage III sporulation protein AA [Clostridium difficile
70-100-2010]
Length = 322
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 87
P GKTT++R+I R LS+ + +V +VD NEI G +P +G R +
Sbjct: 163 PQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGAYLGVPQMDVGI--RTDII 220
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
E + + + + P VI+ DEIG+E E A + G+ LI T HG+ +E+I
Sbjct: 221 ETCPKDLGITMLLRSMSPNVIVTDEIGSEKEIKALYTALNGGIGLITTVHGDSIEDI 277
>gi|440781945|ref|ZP_20960173.1| stage III sporulation protein AA [Clostridium pasteurianum DSM 525]
gi|440220663|gb|ELP59870.1| stage III sporulation protein AA [Clostridium pasteurianum DSM 525]
Length = 305
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVP 87
P GKTT++R+I R +S + K V ++D +EI D IP +G R V
Sbjct: 147 PNCGKTTLIRDITRNISSGSKNFGIRGKNVCVIDERSEICASSDGIPQLNVGI--RTDVM 204
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+ + + ++ A+ + P+VI+ DEIGT + + S G+ LI T HG +E++
Sbjct: 205 DNCPKSQGIMMAIRSMAPDVIVCDEIGTYEDVKSILSALNCGINLITTIHGFGIEDL 261
>gi|225388160|ref|ZP_03757884.1| hypothetical protein CLOSTASPAR_01895 [Clostridium asparagiforme
DSM 15981]
gi|225045777|gb|EEG56023.1| hypothetical protein CLOSTASPAR_01895 [Clostridium asparagiforme
DSM 15981]
Length = 363
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 63/125 (50%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLS--DEFQK--RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +S + F V +VD +E+G +P + +G R V +
Sbjct: 180 PRCGKTTLLRDVIRQVSAGNAFAPGMTVGVVDERSELGACYQGVPQNDLGP--RTDVLDC 237
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ V + P+V+ VDEIG+ + A I G L T HG LE+I P
Sbjct: 238 CPKDQGMMMLVRSMAPQVVAVDEIGSAGDVEAVGYIQSCGCALAATVHGASLEDIYSKPA 297
Query: 150 LSDLI 154
L L+
Sbjct: 298 LGQLV 302
>gi|336421575|ref|ZP_08601732.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000459|gb|EGN30609.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_57FAA]
Length = 312
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGDIPHSAIGTAR-----RMQ 85
P GKTT++R++ R +SD V +VD +EIGG +G A+ R
Sbjct: 153 PRCGKTTLLRDMIRQISDGNDWVRGMAVGVVDERSEIGG------CYMGVAQNHLGIRTD 206
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
V + + + MI + + PEVI VDEIG+ + HA G ++ T H +E +
Sbjct: 207 VLDGCPKAEGMIMLIRSMGPEVIAVDEIGSAEDVHAIEYAMHCGCKMLATVHAGSMEELR 266
Query: 146 KNPILSDLI 154
K P+L +I
Sbjct: 267 KKPLLDQMI 275
>gi|291536399|emb|CBL09511.1| stage III sporulation protein AA [Roseburia intestinalis M50/1]
Length = 318
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 34 RPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPE 88
+PG GKTT +R+ R LS+ + ++ +VD +EI IP + +G R V
Sbjct: 163 KPGAGKTTCLRDCIRSLSNGKEGWEGMKICVVDERSEIAACHLGIPQNDMGI--RTDVLS 220
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
+ + M+ + + P++I VDE+G + + A A GV ++GT H + +E + + P
Sbjct: 221 GCGKSEGMMLMLRSMSPQIIAVDELGGKKDFQAVEQAACSGVRILGTVHADTVEELWEKP 280
Query: 149 IL 150
L
Sbjct: 281 YL 282
>gi|323485467|ref|ZP_08090813.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14163]
gi|323694458|ref|ZP_08108628.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14673]
gi|355628505|ref|ZP_09049787.1| stage III sporulation protein AA [Clostridium sp. 7_3_54FAA]
gi|323401115|gb|EGA93467.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14163]
gi|323501446|gb|EGB17338.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14673]
gi|354819754|gb|EHF04192.1| stage III sporulation protein AA [Clostridium sp. 7_3_54FAA]
Length = 330
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 60/123 (48%), Gaps = 11/123 (8%)
Query: 35 PGVGKTTVMREIARVLSD--------EFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 85
P GKTT++R+I R SD K V +VD +EIG IP + +G R
Sbjct: 170 PRCGKTTLLRDIVRQASDGGSSGKRVRAGKTVGVVDERSEIGACFQGIPQNDVGL--RTD 227
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
+ + + M+ + + P+V+ VDEIG + + A R + G ++ T HG +E+I
Sbjct: 228 ILDCCPKAAGMMMLIRSMAPDVVAVDEIGGDPDLEALRCVMNCGCRILATVHGTSMEDIR 287
Query: 146 KNP 148
P
Sbjct: 288 NKP 290
>gi|408356526|ref|YP_006845057.1| stage III sporulation protein AA [Amphibacillus xylanus NBRC 15112]
gi|407727297|dbj|BAM47295.1| stage III sporulation protein AA [Amphibacillus xylanus NBRC 15112]
Length = 322
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 69/125 (55%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEF----QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R+I+R++ + K+V IVD +EI G IP +G +R V +
Sbjct: 148 PQSGKTTLIRDISRLIGTGWGHMEAKKVGIVDERSEIAGSRNGIPFYQVG--KRTDVLDN 205
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ + + P++IIVDEIG+ + A + + GV L+ T H + ++I ++
Sbjct: 206 CPKSEGMMLMIRSMSPDIIIVDEIGSVRDIEAIQEVIRSGVGLVCTLHSDSYQSIKQSKH 265
Query: 150 LSDLI 154
L +I
Sbjct: 266 LKPII 270
>gi|167747013|ref|ZP_02419140.1| hypothetical protein ANACAC_01725 [Anaerostipes caccae DSM 14662]
gi|167653973|gb|EDR98102.1| stage III sporulation protein AA [Anaerostipes caccae DSM 14662]
Length = 310
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 65/121 (53%), Gaps = 4/121 (3%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQH 93
PG GKTT++R++ R+ SD + V +VD +EI +P + +G R V + +
Sbjct: 160 PGRGKTTLLRDMIRIASDGGET-VGVVDERSEIAASYMGVPQNKVGI--RTDVMDGCPKS 216
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+ M+ V + P VI VDEIG + + A A G L+ T HG+ +E + K P + ++
Sbjct: 217 EGMMMLVRSMAPNVIAVDEIGKKEDVDAMLYSAYCGCTLMATIHGKDMEELKKVPYVGEM 276
Query: 154 I 154
+
Sbjct: 277 M 277
>gi|240145623|ref|ZP_04744224.1| stage III sporulation protein AA [Roseburia intestinalis L1-82]
gi|257202285|gb|EEV00570.1| stage III sporulation protein AA [Roseburia intestinalis L1-82]
Length = 318
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 34 RPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPE 88
+PG GKTT +R+ R LS+ + ++ +VD +EI IP + +G R V
Sbjct: 163 KPGAGKTTCLRDCIRSLSNGKEGWEGMKICVVDERSEIAACHLGIPQNDMGI--RTDVLS 220
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
+ + M+ + + P++I VDE+G + + A A GV ++GT H + +E + + P
Sbjct: 221 GCGKSEGMMLMLRSMSPQIIAVDELGGKKDFQAVEQAACSGVRILGTVHADTVEELWEKP 280
Query: 149 IL 150
L
Sbjct: 281 YL 282
>gi|225018840|ref|ZP_03708032.1| hypothetical protein CLOSTMETH_02790 [Clostridium methylpentosum
DSM 5476]
gi|224948400|gb|EEG29609.1| hypothetical protein CLOSTMETH_02790 [Clostridium methylpentosum
DSM 5476]
Length = 295
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 63/121 (52%), Gaps = 7/121 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQH 93
P GKTT++++I R + D ++ +VD+ E+ +P + +G A V + +
Sbjct: 150 PASGKTTLLKDIVRQMPDH---KITVVDSRGELAACVCGVPQNDVGNA---DVLDGWQKA 203
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+ M+ A+ + P++I+ DEIG +A A GV LI TAH LE + K + D+
Sbjct: 204 EGMMLAIRSMAPDIIVCDEIGDRRDAQAVECCMNAGVKLIATAHAGSLEELTKRRHIMDI 263
Query: 154 I 154
+
Sbjct: 264 L 264
>gi|423082410|ref|ZP_17071002.1| stage III sporulation protein AA [Clostridium difficile
002-P50-2011]
gi|423087822|ref|ZP_17076208.1| stage III sporulation protein AA [Clostridium difficile
050-P50-2011]
gi|357544136|gb|EHJ26142.1| stage III sporulation protein AA [Clostridium difficile
050-P50-2011]
gi|357548736|gb|EHJ30596.1| stage III sporulation protein AA [Clostridium difficile
002-P50-2011]
Length = 322
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 87
P GKTT++R+I R LS+ + +V +VD NEI G IP +G R +
Sbjct: 163 PQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGAYLGIPQMDVGI--RTDII 220
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
E + + + + P VI+ DEIG+E E A + G+ LI T HG+ +++I
Sbjct: 221 ETCPKDLGITMLLRSMSPNVIVTDEIGSEKEIKALYTALNGGIGLITTVHGDSIDDI 277
>gi|291538735|emb|CBL11846.1| stage III sporulation protein AA [Roseburia intestinalis XB6B4]
Length = 269
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 7/122 (5%)
Query: 34 RPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPE 88
+PG GKTT +R+ R LS+ + ++ +VD +EI IP + +G R V
Sbjct: 114 KPGAGKTTCLRDCIRSLSNGKEGWEGMKICVVDERSEIAACHLGIPQNDMGI--RTDVLS 171
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
+ + M+ + + P++I VDE+G + + A A GV ++GT H + +E + + P
Sbjct: 172 GCGKSEGMMLMLRSMSPQIIAVDELGGKKDFQAVEQAACSGVRILGTVHADTVEELWEKP 231
Query: 149 IL 150
L
Sbjct: 232 YL 233
>gi|325265391|ref|ZP_08132115.1| stage III sporulation protein AA [Clostridium sp. D5]
gi|324029392|gb|EGB90683.1| stage III sporulation protein AA [Clostridium sp. D5]
Length = 314
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGDIPHSAIGTAR-----RMQ 85
P GKTT++R++ R +SD V +VD +EIGG +G A+ R
Sbjct: 157 PCCGKTTLIRDLIRQISDGNMYVKGCTVGVVDERSEIGG------CYLGVAQNELGMRTD 210
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
V + + + MI + + P+VI VDEIG+ + HA + G +I + HG ++
Sbjct: 211 VLDCCPKAEGMIMLIRSMAPQVIAVDEIGSPEDVHAIEYAMQCGCKMIASVHGLSMDEAA 270
Query: 146 KNPILSDLI 154
P+L LI
Sbjct: 271 DKPVLGKLI 279
>gi|167758077|ref|ZP_02430204.1| hypothetical protein CLOSCI_00415 [Clostridium scindens ATCC 35704]
gi|167663974|gb|EDS08104.1| stage III sporulation protein AA [Clostridium scindens ATCC 35704]
Length = 312
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGDIPHSAIGTAR-----RMQ 85
P GKTT++R++ R +SD V +VD +EIGG +G A+ R
Sbjct: 153 PRCGKTTLLRDMIRQISDGNDWVRGMAVGVVDERSEIGG------CYMGVAQNHLGIRTD 206
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
V + + + MI + + PEVI VDEIG+ + HA G ++ T H +E +
Sbjct: 207 VLDGCPKAEGMIMLIRSMGPEVIAVDEIGSAEDVHAIEYAMHCGCKMLATVHAGSMEELR 266
Query: 146 KNPILSDLI 154
K P+L +I
Sbjct: 267 KKPLLDRMI 275
>gi|398311387|ref|ZP_10514861.1| stage III sporulation protein AA [Bacillus mojavensis RO-H-1]
Length = 307
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++AR+ S + + IVD +EI G IP G +R+ V +
Sbjct: 145 PQTGKTTLLRDLARLASSGKNRIAPVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDA 202
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + ++ + + PEVIIVDEIG + A GV +I +AHG + +++K P
Sbjct: 203 CPKAEGLMMMIRSMSPEVIIVDEIGRAEDTDALLEALHAGVSVIVSAHGWSISDLMKRPS 262
Query: 150 LSDL 153
L L
Sbjct: 263 LKRL 266
>gi|403070093|ref|ZP_10911425.1| stage III sporulation protein AA [Oceanobacillus sp. Ndiop]
Length = 325
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++ R+++ + K +V ++D +EIG +P +G R V +
Sbjct: 146 PQTGKTTLIRDLTRLIASGYGKISPRKVGVIDERSEIGASLKGVPQHNLGL--RTDVLDA 203
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ M+ + + P+V++VDEIG+ + A GV ++ + HG L+ + K P
Sbjct: 204 CPKSDGMMMMIRSMSPDVLVVDEIGSGEDIAALMEAINAGVTIVCSIHGNDLKELKKRPS 263
Query: 150 LSDL 153
L L
Sbjct: 264 LQQL 267
>gi|331084722|ref|ZP_08333810.1| stage III sporulation protein AA [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410816|gb|EGG90238.1| stage III sporulation protein AA [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 321
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEP 89
PG GKTT++R++ R +SD + + V +VD +E+G I + +G R + +
Sbjct: 157 PGCGKTTLLRDLIRQISDGNRWIQGESVGVVDERSELGACHLGIAQNELGI--RTDILDG 214
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ + + P+++ VDEIG + HA G ++ T HG + + K P+
Sbjct: 215 CPKAEGMLMLIRSMAPKILAVDEIGAPEDIHAMEYAMHCGCRMLATVHGTSMAEVQKKPV 274
Query: 150 LSDLI 154
L LI
Sbjct: 275 LQQLI 279
>gi|254974727|ref|ZP_05271199.1| stage III sporulation protein AA [Clostridium difficile QCD-66c26]
gi|255092116|ref|ZP_05321594.1| stage III sporulation protein AA [Clostridium difficile CIP 107932]
gi|255313853|ref|ZP_05355436.1| stage III sporulation protein AA [Clostridium difficile QCD-76w55]
gi|255516534|ref|ZP_05384210.1| stage III sporulation protein AA [Clostridium difficile QCD-97b34]
gi|255649634|ref|ZP_05396536.1| stage III sporulation protein AA [Clostridium difficile QCD-37x79]
gi|260682798|ref|YP_003214083.1| stage III sporulation protein AA [Clostridium difficile CD196]
gi|260686396|ref|YP_003217529.1| stage III sporulation protein AA [Clostridium difficile R20291]
gi|306519751|ref|ZP_07406098.1| stage III sporulation protein AA [Clostridium difficile QCD-32g58]
gi|384360380|ref|YP_006198232.1| stage III sporulation protein AA [Clostridium difficile BI1]
gi|260208961|emb|CBA61998.1| stage III sporulation protein AA [Clostridium difficile CD196]
gi|260212412|emb|CBE03268.1| stage III sporulation protein AA [Clostridium difficile R20291]
Length = 322
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 87
P GKTT++R+I R LS+ + +V +VD NEI G +P +G R +
Sbjct: 163 PQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGAYLGVPQMDVGI--RTDII 220
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
E + + + + P VI+ DEIG+E E A + G+ LI T HG+ +++I
Sbjct: 221 ETCPKDLGITMLLRSMSPNVIVTDEIGSEKEIKALYTALNGGIGLITTVHGDSIDDI 277
>gi|255655197|ref|ZP_05400606.1| stage III sporulation protein AA [Clostridium difficile QCD-23m63]
gi|296451182|ref|ZP_06892923.1| stage III sporulation protein AA [Clostridium difficile NAP08]
gi|296880466|ref|ZP_06904428.1| stage III sporulation protein AA [Clostridium difficile NAP07]
gi|296260003|gb|EFH06857.1| stage III sporulation protein AA [Clostridium difficile NAP08]
gi|296428420|gb|EFH14305.1| stage III sporulation protein AA [Clostridium difficile NAP07]
Length = 322
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 60/117 (51%), Gaps = 9/117 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 87
P GKTT++R+I R LS+ + +V +VD NEI G +P +G R +
Sbjct: 163 PQCGKTTLIRDIVRNLSNGNEDYGFKGLKVALVDERNEIAGAYLGVPQMDVGI--RTDII 220
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
E + + + + P VI+ DEIG+E E A + G+ LI T HG+ +++I
Sbjct: 221 ETCPKDLGITMLLRSMSPNVIVTDEIGSEKEIKALYTALNGGIGLITTVHGDSIDDI 277
>gi|386759038|ref|YP_006232254.1| ATP-binding stage III sporulation protein [Bacillus sp. JS]
gi|384932320|gb|AFI28998.1| ATP-binding stage III sporulation protein [Bacillus sp. JS]
Length = 307
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSN 65
++ + Y +N +I P GKTT++R++AR LS + R++ IVD +
Sbjct: 127 LLPYLYQTSWLNTLIIG------PPQTGKTTLLRDLAR-LSSTGKNRMLPVKTGIVDERS 179
Query: 66 EIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 124
EI G IP G +R+ V + + + ++ + + PEV+IVDEIG + A
Sbjct: 180 EIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLE 237
Query: 125 IAERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG + +++K P L L
Sbjct: 238 ALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|302392502|ref|YP_003828322.1| stage III sporulation protein AA [Acetohalobium arabaticum DSM
5501]
gi|302204579|gb|ADL13257.1| stage III sporulation protein AA [Acetohalobium arabaticum DSM
5501]
Length = 330
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R LS + +V +VD E+GG + + +G +
Sbjct: 166 PQCGKTTLLRDLIRQLSTGLPEQNFSGLKVGVVDERGELGGSYQGVVQNQLGIRTDLLAN 225
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
P Q MI + PEVI+ DEIG+ + A GV ++ + HG L+ I +
Sbjct: 226 CPKSQG--MILLIRAMSPEVIVTDEIGSRQDVQAICEAVNAGVKIVTSVHGRDLKEIKQR 283
Query: 148 PILSDLIG 155
P L L+G
Sbjct: 284 PNLEKLLG 291
>gi|410460620|ref|ZP_11314295.1| stage III sporulation protein AA [Bacillus azotoformans LMG 9581]
gi|409926878|gb|EKN64030.1| stage III sporulation protein AA [Bacillus azotoformans LMG 9581]
Length = 312
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 9/130 (6%)
Query: 32 YFRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRM 84
Y P GKTT++R++AR++S +V IVD +EI G IP G R+
Sbjct: 144 YGPPQTGKTTLLRDMARMMSTGSYDSNIPSFKVGIVDERSEIAGCVKGIPQHQFGP--RI 201
Query: 85 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
V + + + M+ + + P++++VDEIG + A GV L + HG +E++
Sbjct: 202 DVLDACPKAEGMMMLIRSMSPDILVVDEIGRMEDTEAILEAVNAGVALFISVHGSSMEDL 261
Query: 145 IKNPILSDLI 154
K P + L+
Sbjct: 262 YKRPSIKPLM 271
>gi|374324640|ref|YP_005077769.1| stage III sporulation protein AA [Paenibacillus terrae HPL-003]
gi|357203649|gb|AET61546.1| stage III sporulation protein AA [Paenibacillus terrae HPL-003]
Length = 331
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 71/151 (47%), Gaps = 14/151 (9%)
Query: 22 NKIIFDFFLSYFRPGVGKTTVMREIARVLS---------DEFQKRVVIVDTSNEIGGD-G 71
KI+ LS P GKTT++R++AR LS +V I+D +EI G
Sbjct: 148 GKILHTLILSP--PQHGKTTLLRDLARQLSYGGLESNGGRRSGLKVGIIDERSEIAGSHK 205
Query: 72 DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 131
IP +G R V + + + M+ + + P+V+IVDEIG +A A R G+
Sbjct: 206 GIPGFDVGP--RTDVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVREALHAGIA 263
Query: 132 LIGTAHGEWLENIIKNPILSDLIGGVDTVTL 162
+I +AHG + + P + L G + L
Sbjct: 264 VIASAHGRDVAEMATRPAFAGLTTGQELFQL 294
>gi|291545427|emb|CBL18535.1| stage III sporulation protein AA [Ruminococcus sp. SR1/5]
Length = 310
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R+I R +S+ + V +VD +E+ G IP + +G R + +
Sbjct: 153 PRCGKTTLLRDIIRQMSNGWGNISGVTVGVVDERSELAGCYQGIPQNDLGM--RTDILDG 210
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M + + P V+ VDE+G E + A S+ G LI TAHG +E + P
Sbjct: 211 CPKAEGMQMLIRSMSPVVVAVDELGKEEDFKAVESVIHCGCRLIATAHGASMEETLSQPF 270
Query: 150 LSDL 153
L
Sbjct: 271 FRKL 274
>gi|403744996|ref|ZP_10954024.1| stage III sporulation protein AA [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121651|gb|EJY55928.1| stage III sporulation protein AA [Alicyclobacillus hesperidum
URH17-3-68]
Length = 347
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 11/127 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGG--DGDIPHSAIGTARRMQV 86
P GKTT++R+IAR S+ R VVI+D +EI G +G P A+G R V
Sbjct: 191 PQCGKTTLVRDIARQWSENLVTRRRSPSKVVIIDERSEIAGMFEGR-PQFALGP--RTDV 247
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+ + + ++ A+ + P++++ DEIG + A A GV +I TAH L + +
Sbjct: 248 LDGCPKAEGLLMAIRSLSPDIVVTDEIGKHGDVEAILEAANAGVAVITTAHASSLASWRR 307
Query: 147 NPILSDL 153
P + +L
Sbjct: 308 RPHMEEL 314
>gi|350266640|ref|YP_004877947.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349599527|gb|AEP87315.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 307
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 72/148 (48%), Gaps = 13/148 (8%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDE----FQKRVVIVDTSNE 66
++ F Y +N +I P GKTT++R++AR+ S + IVD +E
Sbjct: 127 LLPFLYRESWLNTLIIG------PPQTGKTTLLRDLARLSSTGKNHMLPVKTGIVDERSE 180
Query: 67 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
I G IP G +R+ V + + + ++ + + PEVIIVDEIG + A
Sbjct: 181 IAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGRIEDTDALLEA 238
Query: 126 AERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG L +++K P L L
Sbjct: 239 LHAGVSVIVSAHGWSLSDLMKRPSLKRL 266
>gi|325661685|ref|ZP_08150308.1| stage III sporulation protein AA [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471938|gb|EGC75153.1| stage III sporulation protein AA [Lachnospiraceae bacterium
4_1_37FAA]
Length = 321
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 15/129 (11%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGDIPHSAIGTAR-----RMQ 85
PG GKTT++R++ R +SD + + V +VD +E+G +G A+ R
Sbjct: 157 PGCGKTTLLRDLIRQISDGNRWIQGESVGVVDERSELGA------CHLGVAQNELGIRTD 210
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
+ + + + M+ + + P+++ VDEIG + HA G ++ T HG + +
Sbjct: 211 ILDGCPKAEGMLMLIRSMAPKILAVDEIGAPEDIHAMEYAMHCGCRMLATVHGTSMAEVQ 270
Query: 146 KNPILSDLI 154
K P+L LI
Sbjct: 271 KKPVLQQLI 279
>gi|291544826|emb|CBL17935.1| Uncharacterized protein conserved in bacteria [Ruminococcus
champanellensis 18P13]
Length = 295
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGG-DGDIPHSAIGTARRMQVPEPSLQH 93
P GKTT++R++ R+L + RV +VD E+ IP +G + P Q
Sbjct: 153 PASGKTTMLRDLCRLLGSRY--RVSVVDERGELAACRQGIPTHDLGAMTDVFDGYPKAQG 210
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
M A+ P+ II DE+G+EAE A + GV ++GTAH L + P L L
Sbjct: 211 --MQIALRVMTPDYIICDELGSEAETTAVLASMNSGVSILGTAHAGSLAQAERRPQLRCL 268
Query: 154 I 154
+
Sbjct: 269 L 269
>gi|295093404|emb|CBK82495.1| stage III sporulation protein AA [Coprococcus sp. ART55/1]
Length = 310
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 6/128 (4%)
Query: 18 LYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHS 76
+YS K++ +S P GKTT++R+I RV+SD V +VD +EI +P +
Sbjct: 144 IYSDGKLMNTLIVS--APCHGKTTLLRDIIRVVSDGGMT-VGVVDERSEIAACYKGVPQN 200
Query: 77 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 136
+G R V + + M+ V P++I VDEIG + + A + G L+ TA
Sbjct: 201 DVGM--RTDVLDCCPKASGMMMLVRTMAPDLIAVDEIGGQQDVDAIFGVINCGCRLLATA 258
Query: 137 HGEWLENI 144
HG ++++
Sbjct: 259 HGYSMDDV 266
>gi|404489858|ref|YP_006713964.1| stage III sporulation protein SpoIIIAA [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|52348854|gb|AAU41488.1| stage III sporulation protein SpoIIIAA [Bacillus licheniformis DSM
13 = ATCC 14580]
Length = 309
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 35 PGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++AR++S + K+V IVD +EI G IP +G R + +
Sbjct: 147 PQTGKTTLLRDLARLISSGSGNAPAKKVGIVDERSEIAGCVNGIPQYRLGD--RADILDA 204
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + ++ + + PEV+I DEIG +A A GV +I +AHG ++ + P
Sbjct: 205 CPKAEGLMMMIRSMSPEVMIADEIGRMEDAEALLEAVHAGVTVIVSAHGYTYADLARRPS 264
Query: 150 LSDL 153
L L
Sbjct: 265 LKML 268
>gi|168333637|ref|ZP_02691897.1| stage III sporulation protein AA [Epulopiscium sp. 'N.t. morphotype
B']
Length = 313
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSD----EFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++ R LS+ + V IVD +EI IP + +G R V +
Sbjct: 157 PKCGKTTILRDVIRNLSNGESLDVSYHVGIVDERSEIAACYMGIPQNDVGI--RTDVLDS 214
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + + ++ + + PE+I VDEIG + + A GV +I T HG L + + P+
Sbjct: 215 APKAEGILMLLRSMSPEIIAVDEIGRDEDYKAIFDALIVGVTVICTIHGSSLNDCLNKPL 274
Query: 150 LSDLI 154
L D++
Sbjct: 275 LKDML 279
>gi|390935036|ref|YP_006392541.1| stage III sporulation protein AA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570537|gb|AFK86942.1| stage III sporulation protein AA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 334
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSD-----EFQ-KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR +S+ FQ ++V IVD +EI IP + +G R V
Sbjct: 166 PQCGKTTLIRDIARNISNGMPELNFQGEKVSIVDERSEIAACFKGIPQNDVGY--RTDVL 223
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ +H ++ + + P+VII DEIG + + GV +I T HG +E++ +
Sbjct: 224 DLCPKHIGILMMIRSMSPKVIITDEIGKVEDISSIHEALNAGVSIITTVHGNGIEDVARK 283
Query: 148 PILSDLI 154
+ +++
Sbjct: 284 KYIDEML 290
>gi|160934305|ref|ZP_02081692.1| hypothetical protein CLOLEP_03176 [Clostridium leptum DSM 753]
gi|156866978|gb|EDO60350.1| putative stage III sporulation protein AA [Clostridium leptum DSM
753]
Length = 336
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 5/113 (4%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQH 93
P GKTT++R++AR LS + K+VV++D E+GG I + +G + V +
Sbjct: 169 PSSGKTTILRDLARQLSIK-GKKVVVIDERGELGGAFQGICQNDLGLS---DVLTGFPKG 224
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+ +++AV PE+II DE G+ EA A GV LI T H LE I +
Sbjct: 225 EGILQAVRCLSPELIICDEAGSRQEAAAIEEGLNAGVGLITTLHAGSLEEIYR 277
>gi|317128413|ref|YP_004094695.1| stage III sporulation protein AA [Bacillus cellulosilyticus DSM
2522]
gi|315473361|gb|ADU29964.1| stage III sporulation protein AA [Bacillus cellulosilyticus DSM
2522]
Length = 310
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S + R V I+D +EI G +P G ++ +
Sbjct: 151 PKSGKTTLLRDLAREISIGSKSRKIEPKNVGIIDERSEIAGSVKGVPQHDFGV--KIDIL 208
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + ++ + + PEV+IVDEIG + + A GV + + HGE L ++
Sbjct: 209 DACPKAEGLMMMIRSMSPEVLIVDEIGRKEDCEAIMEAVHAGVTIFASVHGENLNDVKSR 268
Query: 148 PILSDLI 154
P ++ LI
Sbjct: 269 PTIARLI 275
>gi|52080976|ref|YP_079767.1| hypothetical protein BL01540 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319645066|ref|ZP_07999299.1| SpoIIIAA protein [Bacillus sp. BT1B_CT2]
gi|423682948|ref|ZP_17657787.1| hypothetical protein MUY_02800 [Bacillus licheniformis WX-02]
gi|52004187|gb|AAU24129.1| SpoIIIAA [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|317392875|gb|EFV73669.1| SpoIIIAA protein [Bacillus sp. BT1B_CT2]
gi|383439722|gb|EID47497.1| hypothetical protein MUY_02800 [Bacillus licheniformis WX-02]
Length = 307
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 65/124 (52%), Gaps = 7/124 (5%)
Query: 35 PGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++AR++S + K+V IVD +EI G IP +G R + +
Sbjct: 145 PQTGKTTLLRDLARLISSGSGNAPAKKVGIVDERSEIAGCVNGIPQYRLGD--RADILDA 202
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + ++ + + PEV+I DEIG +A A GV +I +AHG ++ + P
Sbjct: 203 CPKAEGLMMMIRSMSPEVMIADEIGRMEDAEALLEAVHAGVTVIVSAHGYTYADLARRPS 262
Query: 150 LSDL 153
L L
Sbjct: 263 LKML 266
>gi|239627516|ref|ZP_04670547.1| stage III sporulation protein AA [Clostridiales bacterium
1_7_47_FAA]
gi|239517662|gb|EEQ57528.1| stage III sporulation protein AA [Clostridiales bacterium
1_7_47FAA]
Length = 332
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK---------RVVIV 61
++ F Y +N ++ P GKTT++R+I R +SD + V +V
Sbjct: 146 VMDFLYDGRFLNTLVIS------PPRCGKTTLLRDIIRQVSDGWVGHSGDRVPGVSVGVV 199
Query: 62 DTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 120
D +E+ +P + +G R V + + + M+ V P VI VDEIG+ +A
Sbjct: 200 DERSELAACYQGVPQNDLGM--RTDVLDCCPKSQGMMMLVRTMAPGVIAVDEIGSRQDAE 257
Query: 121 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
A + G L T HG LE+I + P + L+
Sbjct: 258 AIEYVRNCGCALAATIHGSSLEDIRQKPSMGGLL 291
>gi|374296405|ref|YP_005046596.1| stage III sporulation protein AA [Clostridium clariflavum DSM
19732]
gi|359825899|gb|AEV68672.1| stage III sporulation protein AA [Clostridium clariflavum DSM
19732]
Length = 340
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG--DGDIPHSAIGTARRMQV 86
P GKTT++R+IAR +SD + +V IVD +EI G P +G R V
Sbjct: 176 PKCGKTTILRDIARSISDGVAQIGLKGLKVGIVDERSEIAACFKGS-PQKQVGV--RTDV 232
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI-I 145
+ + M + + P+VII DEIG+ + A + GV ++ TAHG + + +
Sbjct: 233 LDACPKQLGMSMLLRSMSPDVIITDEIGSSGDKEALMQVINAGVKIVTTAHGYSISQLKL 292
Query: 146 KNPILSDL 153
+ +LS L
Sbjct: 293 RKEVLSML 300
>gi|152976597|ref|YP_001376114.1| sporulation stage III protein AA [Bacillus cytotoxicus NVH 391-98]
gi|152025349|gb|ABS23119.1| Sporulation stage III protein AA [Bacillus cytotoxicus NVH 391-98]
Length = 307
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR +S +V IVD +EI G IP G R+ V
Sbjct: 143 PQTGKTTLLRDVARCMSQGVGFANIPSCKVGIVDERSEIAGCVKGIPQYEFGP--RVDVL 200
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+++IVDEIG ++ A GV L +AHG ++I K
Sbjct: 201 DACPKAEGMMMMIRSMSPDILIVDEIGRMEDSEAIMEAVHAGVQLFISAHGFSFDDIRKR 260
Query: 148 PILSDLI 154
P L ++
Sbjct: 261 PSLKAVM 267
>gi|225174900|ref|ZP_03728897.1| stage III sporulation protein AA [Dethiobacter alkaliphilus AHT 1]
gi|225169540|gb|EEG78337.1| stage III sporulation protein AA [Dethiobacter alkaliphilus AHT 1]
Length = 341
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLS--DEFQKR----VVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTTV+R++AR+ D R V IVD +EI G +P +G R V
Sbjct: 175 PQAGKTTVLRDLARLFGNGDAASGRPAFNVGIVDERSEIAGCYQGVPQLDVGL--RSDVL 232
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ V + P++++ DE+G +A A G ++ TAHG+ + + +
Sbjct: 233 DGCPKAEGMMMLVRSMSPQIVVTDELGRPEDARAVEEAVNTGASILATAHGQSMTELFRR 292
Query: 148 PILSDLI 154
P L+ L+
Sbjct: 293 PSLAYLL 299
>gi|163816778|ref|ZP_02208141.1| hypothetical protein COPEUT_02968 [Coprococcus eutactus ATCC 27759]
gi|158448035|gb|EDP25030.1| stage III sporulation protein AA [Coprococcus eutactus ATCC 27759]
Length = 294
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 73/151 (48%), Gaps = 13/151 (8%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDEF 54
+R++ L ++ + + + + + +S R P GKTT++R+I RV+S+
Sbjct: 103 IRHISFLNIRVAHEIKGCSNRVMQYIVSGGRLLNTLIVSAPCHGKTTLLRDIIRVVSNS- 161
Query: 55 QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 113
V +VD +EI IP + +G R V + + M+ V PE+I VDEI
Sbjct: 162 GTTVGVVDERSEIAACYKGIPQNDVGI--RTDVLDCCPKAAGMMMLVRTMAPELIAVDEI 219
Query: 114 GTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
G A+ A + G L+ TAHG ++++
Sbjct: 220 GGPADVDAIFGVVNCGCRLLATAHGYSIDDV 250
>gi|160880656|ref|YP_001559624.1| stage III sporulation protein AA [Clostridium phytofermentans ISDg]
gi|160429322|gb|ABX42885.1| stage III sporulation protein AA [Clostridium phytofermentans ISDg]
Length = 322
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR----------VVIVDTSNEIGGD-GDIPHSAIGTARR 83
PG GKTT++R++ R LSD Q V +VD +EI P + +G R
Sbjct: 160 PGCGKTTLLRDVIRQLSDGEQDTKGGSYREGIPVGVVDERSEIAACYMGTPQNDLGI--R 217
Query: 84 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 143
V + + K M+ + + P V+ VDEIG + A G+ +I T HG ++
Sbjct: 218 TDVLDCCPKAKGMMLLIRSMSPSVLAVDEIGLGEDIEAIHYAMGCGIKMIATVHGGTIDE 277
Query: 144 IIKNPILSDLI 154
+ P+L +LI
Sbjct: 278 VRDKPLLGELI 288
>gi|308069614|ref|YP_003871219.1| stage III sporulation protein AA [Paenibacillus polymyxa E681]
gi|305858893|gb|ADM70681.1| Stage III sporulation protein AA [Paenibacillus polymyxa E681]
Length = 331
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQK---------RVVIVDTSNEIGGD-GDIPHSAIGTARRM 84
P GKTT++R++AR LS + +V I+D +EI G IP +G R
Sbjct: 159 PQHGKTTLLRDLARQLSYGGMESNGGRRNGLKVGIIDERSEIAGSHKGIPGFDVGP--RT 216
Query: 85 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
V + + + M+ + + P+V+IVDEIG +A A R G+ +I +AHG + +
Sbjct: 217 DVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEM 276
Query: 145 IKNPILSDLIGGVDTVTL 162
P + L G + L
Sbjct: 277 ATRPAFAGLTTGQELFQL 294
>gi|317056392|ref|YP_004104859.1| AAA ATPase [Ruminococcus albus 7]
gi|315448661|gb|ADU22225.1| AAA ATPase [Ruminococcus albus 7]
Length = 298
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 74/163 (45%), Gaps = 13/163 (7%)
Query: 1 MLRLRNVFLLIVKFFYALYSINKIIFDFFLSYF--------RPGVGKTTVMREIARVLSD 52
++ ++N+ L ++ + IFD F+S P GKTT +R++ R+
Sbjct: 111 IVNVKNITSLNIRIPREIKGCAGSIFDRFMSAAPRSLLIAGSPSSGKTTFLRDLTRLCGH 170
Query: 53 EFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 111
+ R ++D EI G IP + IG + P + + + AV P+VI+ D
Sbjct: 171 RY--RTSLIDERGEIAASVGGIPANDIGIMTDVFDRYP--RKEAVQTAVRVMSPQVIVCD 226
Query: 112 EIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
EIG+ + + + G LI + H L ++I P +S L+
Sbjct: 227 EIGSAEDITSLEYAVDSGAELIASCHCSGLSDLIHKPNISKLV 269
>gi|331091290|ref|ZP_08340131.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404737|gb|EGG84276.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_46FAA]
Length = 307
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGDIPHSAIGTAR-----RMQ 85
P GKTT++R++ R +SD + V +VD +E+GG +GTA+ R
Sbjct: 148 PRCGKTTLLRDMIRQISDGNRWVKGVPVGVVDERSELGG------CYMGTAQNELGIRTD 201
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
+ + + M+ + + P+VI VDEIG E A G ++ TAHG +E +
Sbjct: 202 ILDCCPKADGMLMLIRSMAPQVIAVDEIGAREEIRAIEYALHCGCKMLATAHGVSMEEMK 261
Query: 146 KNPILSDLI 154
K P LI
Sbjct: 262 KKPFFEQLI 270
>gi|338812834|ref|ZP_08624987.1| stage III sporulation protein AA [Acetonema longum DSM 6540]
gi|337275133|gb|EGO63617.1| stage III sporulation protein AA [Acetonema longum DSM 6540]
Length = 336
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 71/146 (48%), Gaps = 11/146 (7%)
Query: 16 YALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG 69
Y + NK+ +S P GKTTV+R++ R LS + +V +VD +EI
Sbjct: 152 YVIQGHNKVYNTLIIS--PPRCGKTTVLRDLTRQLSSGVSQYGFAGVQVGLVDERSEIAA 209
Query: 70 D-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAER 128
+P +G R+ + + + M+ + + P+VI+ DE+G+E + A
Sbjct: 210 CYQGVPTVEVGP--RVDILDGCPKAIGMLMLIRSMSPQVIVTDELGSEEDVRAVNEALHA 267
Query: 129 GVMLIGTAHGEWLENIIKNPILSDLI 154
GV +I + HG+ +I+ P S+LI
Sbjct: 268 GVSVIASIHGQNATDILHRPCSSELI 293
>gi|296333400|ref|ZP_06875853.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675094|ref|YP_003866766.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296149598|gb|EFG90494.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413338|gb|ADM38457.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 307
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 13/148 (8%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDE----FQKRVVIVDTSNE 66
++ F Y +N +I P GKTT++R++AR+ S + IVD +E
Sbjct: 127 LLPFLYRDSWLNTLIIG------PPQTGKTTLLRDLARLSSTGKNHILPVKTGIVDERSE 180
Query: 67 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
I G IP G +R+ V + + + ++ + + PEVIIVDEIG + A
Sbjct: 181 IAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGRVEDTDALLEA 238
Query: 126 AERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG + +++K P L L
Sbjct: 239 LHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|15895363|ref|NP_348712.1| stage III sporulation protein AA [Clostridium acetobutylicum ATCC
824]
gi|337737311|ref|YP_004636758.1| stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum DSM 1731]
gi|384458819|ref|YP_005671239.1| Stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum EA 2018]
gi|15025082|gb|AAK80052.1|AE007711_9 Stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum ATCC 824]
gi|325509508|gb|ADZ21144.1| Stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum EA 2018]
gi|336291043|gb|AEI32177.1| stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum DSM 1731]
Length = 305
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 15/149 (10%)
Query: 13 KFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLS---DEFQ---KRVVIVDTSNE 66
K Y +N II P GKTT++R+I R +S + Q K+V ++D +E
Sbjct: 130 KIVYGNTVLNTIIIS------PPNCGKTTLLRDITRNISYGINSIQFRGKKVCVIDERSE 183
Query: 67 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
IG + IG R + + + ++ A+ + PEVII DEIGT + + +
Sbjct: 184 IGACLNGVNQMDIGI--RTDILDNCPKSIGIMMAIRSMAPEVIICDEIGTYDDIKSILTA 241
Query: 126 AERGVMLIGTAHGEWLENIIKNPILSDLI 154
GV LI T HG +E++ + D I
Sbjct: 242 VNCGVKLITTIHGFGIEDLNSRDVFKDAI 270
>gi|452975004|gb|EME74823.1| stage III sporulation protein AA [Bacillus sonorensis L12]
Length = 307
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 7/124 (5%)
Query: 35 PGVGKTTVMREIARVLSDEF----QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++ R++S K+ IVD +EI G IP G R+ + +
Sbjct: 145 PQTGKTTLLRDLGRLISTGSGKIPAKKAAIVDERSEIAGCVNGIPQYKFGN--RIDILDA 202
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + ++ + + PEV+I DEIG +A A GV +I +AHG ++ K P
Sbjct: 203 CPKAEGLMMMIRSMSPEVVIADEIGRMEDAEALLEAVHAGVSVIVSAHGFTYSDVSKRPS 262
Query: 150 LSDL 153
L L
Sbjct: 263 LKLL 266
>gi|332799361|ref|YP_004460860.1| stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
gi|438002504|ref|YP_007272247.1| Stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
gi|332697096|gb|AEE91553.1| stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
gi|432179298|emb|CCP26271.1| Stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
Length = 340
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 66/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLS---DEFQKR---VVIVDTSNEIGGDGD-IPHSAIGTARRMQVP 87
P GKTT++R+I R LS DEF + + +VD +EI + IP + +G R V
Sbjct: 172 PKAGKTTLLRDIIRQLSSGVDEFGIKGFNIGLVDERSEIACCYEGIPQNDVGI--RTDVL 229
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + K ++ + + P++I DEIG + A GV +I TAHG L++I +
Sbjct: 230 DSCPKAKGIMLLLRSMSPDIIATDEIGRNEDVIAIEEAINTGVTIITTAHGSDLDDIRRR 289
Query: 148 PILSDLI 154
P + LI
Sbjct: 290 PTIRKLI 296
>gi|402776705|ref|YP_006630649.1| ATP-binding stage III sporulation protein [Bacillus subtilis QB928]
gi|402481885|gb|AFQ58394.1| ATP-binding stage III sporulation protein [Bacillus subtilis QB928]
Length = 308
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSN 65
++ + Y +N +I P GKTT++R++AR LS +K ++ IVD +
Sbjct: 128 LLPYLYQNSWLNTLIIG------PPQTGKTTLLRDLAR-LSSTGKKNMLPVKTGIVDERS 180
Query: 66 EIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 124
EI G IP G +R+ V + + + ++ + + PEV+IVDEIG + A
Sbjct: 181 EIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLE 238
Query: 125 IAERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG + +++K P L L
Sbjct: 239 ALHAGVSVIVSAHGWSISDLMKRPSLKRL 267
>gi|433654894|ref|YP_007298602.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293083|gb|AGB18905.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 333
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 35 PGVGKTTVMREIARVLSD-----EFQ-KRVVIVDTSNEIGG--DGDIPHSAIGTARRMQV 86
P GKTT++R+IAR +S+ +F + V I+D +EI G+ P + +G R V
Sbjct: 166 PQCGKTTLLRDIARNISNGMADLDFNGENVSIIDERSEIAACFKGN-PQNDVGY--RTDV 222
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+ +H ++ + + P+VII DEIG + A GV +I T HG+ +E+I++
Sbjct: 223 LDSCPKHIGILMMIRSMSPKVIITDEIGKIEDILAIHEALNAGVSIITTVHGKDIEDIMR 282
Query: 147 NPILSDLI 154
+ D++
Sbjct: 283 KKHIDDML 290
>gi|407959688|dbj|BAM52928.1| ATP-binding stage III sporulation protein [Bacillus subtilis
BEST7613]
gi|407965263|dbj|BAM58502.1| ATP-binding stage III sporulation protein [Bacillus subtilis
BEST7003]
Length = 307
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSN 65
++ + Y +N +I P GKTT++R++AR LS +K ++ IVD +
Sbjct: 127 LLPYLYQNSWLNTLIIG------PPQTGKTTLLRDLAR-LSSTGKKNMLPVKTGIVDERS 179
Query: 66 EIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 124
EI G IP G +R+ V + + + ++ + + PEV+IVDEIG + A
Sbjct: 180 EIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLE 237
Query: 125 IAERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG + +++K P L L
Sbjct: 238 ALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|16079499|ref|NP_390323.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221310366|ref|ZP_03592213.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. 168]
gi|221314690|ref|ZP_03596495.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221319613|ref|ZP_03600907.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. JH642]
gi|221323889|ref|ZP_03605183.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. SMY]
gi|418032384|ref|ZP_12670867.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. SC-8]
gi|449094940|ref|YP_007427431.1| ATP-binding stage III sporulation protein [Bacillus subtilis XF-1]
gi|452915262|ref|ZP_21963888.1| stage III sporulation protein AA [Bacillus subtilis MB73/2]
gi|730774|sp|Q01367.1|SP3AA_BACSU RecName: Full=Stage III sporulation protein AA
gi|581722|emb|CAA43959.1| SpoIIIAA protein [Bacillus subtilis subsp. subtilis str. 168]
gi|1000359|gb|AAA76720.1| SpoIIIAA [Bacillus subtilis subsp. subtilis str. JH642]
gi|1303904|dbj|BAA12560.1| SpoIIIAA [Bacillus subtilis]
gi|2634877|emb|CAB14374.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|351471247|gb|EHA31368.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. SC-8]
gi|449028855|gb|AGE64094.1| ATP-binding stage III sporulation protein [Bacillus subtilis XF-1]
gi|452115610|gb|EME06006.1| stage III sporulation protein AA [Bacillus subtilis MB73/2]
Length = 307
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSN 65
++ + Y +N +I P GKTT++R++AR LS +K ++ IVD +
Sbjct: 127 LLPYLYQNSWLNTLIIG------PPQTGKTTLLRDLAR-LSSTGKKNMLPVKTGIVDERS 179
Query: 66 EIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 124
EI G IP G +R+ V + + + ++ + + PEV+IVDEIG + A
Sbjct: 180 EIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLE 237
Query: 125 IAERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG + +++K P L L
Sbjct: 238 ALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|428279930|ref|YP_005561665.1| stage III sporulation protein AA [Bacillus subtilis subsp. natto
BEST195]
gi|291484887|dbj|BAI85962.1| stage III sporulation protein AA [Bacillus subtilis subsp. natto
BEST195]
Length = 307
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSN 65
++ + Y +N +I P GKTT++R++AR LS +K ++ IVD +
Sbjct: 127 LLPYLYQNSWLNTLIIG------PPQTGKTTLLRDLAR-LSSTGKKNMLPVKTGIVDERS 179
Query: 66 EIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 124
EI G IP G +R+ V + + + ++ + + PEV+IVDEIG + A
Sbjct: 180 EIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLE 237
Query: 125 IAERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG + +++K P L L
Sbjct: 238 ALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|384176064|ref|YP_005557449.1| stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349595288|gb|AEP91475.1| stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 307
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSN 65
++ + Y +N +I P GKTT++R++AR LS +K ++ IVD +
Sbjct: 127 LLPYLYQNSWLNTLIIG------PPQTGKTTLLRDLAR-LSSTGKKSMLPVKTGIVDERS 179
Query: 66 EIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 124
EI G IP G +R+ V + + + ++ + + PEV+IVDEIG + A
Sbjct: 180 EIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLE 237
Query: 125 IAERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG + +++K P L L
Sbjct: 238 ALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|304316750|ref|YP_003851895.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778252|gb|ADL68811.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 333
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 35 PGVGKTTVMREIARVLSD-----EFQ-KRVVIVDTSNEIGG--DGDIPHSAIGTARRMQV 86
P GKTT++R+IAR +S+ +F + V I+D +EI G+ P + +G R V
Sbjct: 166 PQCGKTTLLRDIARNISNGMADLDFNGENVSIIDERSEIAACFKGN-PQNDVGY--RTDV 222
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+ +H ++ + + P+VII DEIG + A GV +I T HG+ +E+I++
Sbjct: 223 LDSCPKHIGILMMIRSMSPKVIITDEIGKIEDILAIHEALNAGVSIITTVHGKDIEDIMR 282
Query: 147 NPILSDLI 154
+ D++
Sbjct: 283 KKHIDDML 290
>gi|355672461|ref|ZP_09058391.1| stage III sporulation protein AA [Clostridium citroniae WAL-17108]
gi|354815162|gb|EHE99758.1| stage III sporulation protein AA [Clostridium citroniae WAL-17108]
Length = 328
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 69/145 (47%), Gaps = 13/145 (8%)
Query: 21 INKIIFDFFLSYF---RPGVGKTTVMREIARVLSDEFQK-------RVVIVDTSNEIGGD 70
++ + D FL+ P GKTT++R+I R +S+ + V +VD +E+
Sbjct: 147 MDYLYMDRFLNTLIISPPRCGKTTLLRDIIRQVSNGRSRDRWIPGMSVGVVDERSELAAC 206
Query: 71 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 129
IP + +G R V + + + M+ V P VI VDEIG+ + A + G
Sbjct: 207 YQGIPQNDLGV--RTDVLDCCPKSQGMMMLVRTMAPGVIAVDEIGSRQDMEAIEYVRNCG 264
Query: 130 VMLIGTAHGEWLENIIKNPILSDLI 154
L T HG LE+I + P + +L+
Sbjct: 265 CSLAATIHGNSLEDIRQKPCMGELL 289
>gi|354582540|ref|ZP_09001441.1| stage III sporulation protein AA [Paenibacillus lactis 154]
gi|353198832|gb|EHB64298.1| stage III sporulation protein AA [Paenibacillus lactis 154]
Length = 332
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 12/130 (9%)
Query: 35 PGVGKTTVMREIARVLS-DEFQK--------RVVIVDTSNEIGG-DGDIPHSAIGTARRM 84
P GKTT++R++AR +S ++ +V IVD +EI G +P +G R
Sbjct: 161 PQHGKTTLLRDLARQISYGQWGAGTVRWPGMKVGIVDERSEIAGCQRGVPGFDVGP--RT 218
Query: 85 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
V + + + M+ + + P+V+IVDEIG +A A G+ +I TAHG ++++
Sbjct: 219 DVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRAEDAEAVVEALHAGISVIATAHGSSVQDM 278
Query: 145 IKNPILSDLI 154
P LS LI
Sbjct: 279 RGRPALSGLI 288
>gi|321311927|ref|YP_004204214.1| stage III sporulation protein AA [Bacillus subtilis BSn5]
gi|320018201|gb|ADV93187.1| stage III sporulation protein AA [Bacillus subtilis BSn5]
Length = 307
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 75/149 (50%), Gaps = 15/149 (10%)
Query: 11 IVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSN 65
++ + Y +N +I P GKTT++R++AR LS +K ++ IVD +
Sbjct: 127 LLPYLYQSSWLNTLIIG------PPQTGKTTLLRDLAR-LSSTGKKPMLPVKTGIVDERS 179
Query: 66 EIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 124
EI G IP G +R+ V + + + ++ + + PEV+IVDEIG + A
Sbjct: 180 EIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLE 237
Query: 125 IAERGVMLIGTAHGEWLENIIKNPILSDL 153
GV +I +AHG + +++K P L L
Sbjct: 238 ALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|374603523|ref|ZP_09676501.1| stage III sporulation protein AA [Paenibacillus dendritiformis
C454]
gi|374390825|gb|EHQ62169.1| stage III sporulation protein AA [Paenibacillus dendritiformis
C454]
Length = 341
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 73/152 (48%), Gaps = 19/152 (12%)
Query: 20 SINKIIFDFFLSYFR-------PGVGKTTVMREIARVLSDEFQK---------RVVIVDT 63
S+ ++ DF ++ P GKTT++R++ R + +V +VD
Sbjct: 140 SVMPMLLDFKHAHVHHTLIVSPPQQGKTTLLRDLVRAIGSGLWHHPEARWKALKVGVVDE 199
Query: 64 SNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHAC 122
+EI G +P +G R V + + + M+ + + P+V+ VDE+G E + A
Sbjct: 200 RSEIAGCIKGVPSYDLGY--RTDVMDGCPKAEGMMMFIRSMSPDVLAVDEMGREEDLLAM 257
Query: 123 RSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
R GV LI TAH E ++++++ P L L+
Sbjct: 258 REAMHAGVRLIATAHAEDMDDLLRRPGLQQLL 289
>gi|443631736|ref|ZP_21115916.1| stage III sporulation protein AA [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347851|gb|ELS61908.1| stage III sporulation protein AA [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 305
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 35 PGVGKTTVMREIARVLSDE----FQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++AR+ S + IVD +EI G IP G +R+ V +
Sbjct: 145 PQTGKTTLLRDLARLSSTGKNLMLPVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDA 202
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + ++ + + PEVIIVDEIG + A GV +I +AHG + +++K P
Sbjct: 203 CPKAEGLMMMIRSMSPEVIIVDEIGRVEDTDALLEALHAGVSVIVSAHGWSISDLMKRPS 262
Query: 150 LSDL 153
L L
Sbjct: 263 LKRL 266
>gi|239827682|ref|YP_002950306.1| stage III sporulation protein AA [Geobacillus sp. WCH70]
gi|239807975|gb|ACS25040.1| stage III sporulation protein AA [Geobacillus sp. WCH70]
Length = 308
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+ AR++S ++V IVD +EI G IP +G R+ V
Sbjct: 145 PQTGKTTLLRDAARMISMGINEKHIPSQKVGIVDERSEIAGCVKGIPQFELGN--RVDVL 202
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG ++ A GV + T HG +++ +
Sbjct: 203 DACPKAEGMMMMIRSMSPDVLIVDEIGRAEDSEAILEAVNAGVCIWTTVHGRKWKDVFQR 262
Query: 148 PILSDLI 154
P L +I
Sbjct: 263 PTLRPII 269
>gi|302389879|ref|YP_003825700.1| stage III sporulation protein AA [Thermosediminibacter oceani DSM
16646]
gi|302200507|gb|ADL08077.1| stage III sporulation protein AA [Thermosediminibacter oceani DSM
16646]
Length = 341
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 11/129 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG--DGDIPHSAIGTARRMQV 86
P GKTT++R++ R LS + +V +VD +EI +G +P + +G R V
Sbjct: 172 PKAGKTTLLRDLIRQLSSGNPRLGLKGFKVGVVDERSEIACCYEG-VPQNDVGI--RTDV 228
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+ + + ++ + + P++I DEIG + A GV L+ TAHG LE++ +
Sbjct: 229 LDGCPKARGIMMLLRSMSPDIIATDEIGRTEDVEAMEEALNAGVKLLTTAHGADLEDVGR 288
Query: 147 NPILSDLIG 155
P L LIG
Sbjct: 289 RPTLRKLIG 297
>gi|283797254|ref|ZP_06346407.1| stage III sporulation protein AA [Clostridium sp. M62/1]
gi|291075104|gb|EFE12468.1| stage III sporulation protein AA [Clostridium sp. M62/1]
Length = 427
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +SD K V IVD +EI I + +G R V +
Sbjct: 216 PCCGKTTLLRDLVRKISDGCGYMEGKTVGIVDERSEIAACFQGIAQNDVGM--RSDVLDG 273
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ + + P+V+ VDEIG + A R A G LI TAHG +++ P
Sbjct: 274 CPKAQGMMMLIRSMAPQVLAVDEIGGREDLEALRYAAGCGCSLIATAHGTSYQDVEAKPA 333
Query: 150 LSDL 153
+L
Sbjct: 334 FREL 337
>gi|326500622|dbj|BAJ94977.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 220
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/26 (96%), Positives = 26/26 (100%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRVV 59
RPGVGKTTVMREIARVL+DEFQKRVV
Sbjct: 195 RPGVGKTTVMREIARVLADEFQKRVV 220
>gi|315646315|ref|ZP_07899435.1| stage III sporulation protein AA [Paenibacillus vortex V453]
gi|315278514|gb|EFU41830.1| stage III sporulation protein AA [Paenibacillus vortex V453]
Length = 332
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 74/143 (51%), Gaps = 14/143 (9%)
Query: 22 NKIIFDFFLSYFRPGVGKTTVMREIARVLS-DEFQK--------RVVIVDTSNEIGGD-G 71
+++ LS P GKTT++R++AR +S ++ K +V IVD +EI G
Sbjct: 150 KRVLHTLILSP--PQQGKTTLLRDLARQISHGKWGKSAVHWPGMKVGIVDERSEIAGCLR 207
Query: 72 DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 131
+P +G R V + + + M+ + + P+V+IVDEIG +A A G+
Sbjct: 208 GVPGFDVGP--RTDVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVIEALHAGIS 265
Query: 132 LIGTAHGEWLENIIKNPILSDLI 154
+I TAHG ++++ P LS L+
Sbjct: 266 VIATAHGSSVQDMRGRPALSGLL 288
>gi|336434712|ref|ZP_08614434.1| stage III sporulation protein AA [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008491|gb|EGN38507.1| stage III sporulation protein AA [Lachnospiraceae bacterium
1_4_56FAA]
Length = 313
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSD--EFQK--RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +SD + K V +VD +E+GG I + IG R + +
Sbjct: 157 PCCGKTTLIRDMIRQISDGNAYVKGCTVGVVDERSELGGCYLGIAQNDIGM--RTDILDC 214
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + MI + + P V+ +DEIG E E A G LI + HG LE I + P
Sbjct: 215 CPKAEGMILLIRSMAPRVLAIDEIGGEEEIRALEYAMHCGCKLIASVHGSDLEEISERPG 274
Query: 150 LSDLI 154
+ +LI
Sbjct: 275 VKELI 279
>gi|366166835|ref|ZP_09466590.1| stage III sporulation protein AA [Acetivibrio cellulolyticus CD2]
Length = 340
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 11/112 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG--DGDIPHSAIGTARRMQV 86
P GKTT++R++AR LSD +V +VD +EI G P +G R V
Sbjct: 176 PKCGKTTILRDLARNLSDGVDGFAIRGLKVGVVDERSEIAACFKGS-PQKEVGA--RTDV 232
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
+ + M + + P+VII DEIG + A + GV +I TAHG
Sbjct: 233 LDACPKQLGMSMMLRSMSPDVIITDEIGCNGDKEALMQVLNAGVKIITTAHG 284
>gi|334137167|ref|ZP_08510612.1| stage III sporulation protein AA [Paenibacillus sp. HGF7]
gi|333605365|gb|EGL16734.1| stage III sporulation protein AA [Paenibacillus sp. HGF7]
Length = 397
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 36 GVGKTTVMREIARVLS--DEFQKR----VVIVDTSNEIGG-DGDIPHSAIGTARRMQVPE 88
G G RE AR S D Q+R V IVD +EI + +P +G R V +
Sbjct: 216 GSGLEAGSREPARRPSAPDRPQRRAGWKVGIVDERSEIAASERGVPRFDLGP--RTDVLD 273
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
+ + M+ + + PEV+IVDEIG +A A R G+ +I TAHG L ++ + P
Sbjct: 274 ACPKAEGMMMMIRSMSPEVLIVDEIGRHEDAEAIREALHAGIRIIATAHGRDLGDVKRRP 333
Query: 149 ILSDLI 154
+L +L+
Sbjct: 334 VLRELL 339
>gi|28211253|ref|NP_782197.1| stage III sporulation protein AA [Clostridium tetani E88]
gi|28203693|gb|AAO36134.1| stage III sporulation protein AA [Clostridium tetani E88]
Length = 303
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IA+ LS+ K +V ++D +EI +P +G R V
Sbjct: 146 PNCGKTTLLRDIAKKLSNGISKLDLKGMKVCVIDERSEIASCVNGVPQLNLGL--RTDVL 203
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+ + + ++ A+ + P+VI+ DEIG+ + + GV LI T HG +++I
Sbjct: 204 DSCPKSQGIMMAIRSMSPDVIVCDEIGSTEDIESIIKAMNSGVKLITTVHGYDVKDI 260
>gi|430759091|ref|YP_007209015.1| Stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430023611|gb|AGA24217.1| Stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. BSP1]
Length = 307
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTARRMQVPE 88
P GKTT++R++AR LS +K ++ IVD +EI G IP G +R+ V +
Sbjct: 145 PQTGKTTLLRDLAR-LSSTGKKPMLPVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLD 201
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
+ + ++ + + PEV+IVDEIG + A GV +I +AHG + +++K P
Sbjct: 202 ACPKAEGLMMMIRSMSPEVMIVDEIGRMEDTDALLEALHAGVSVIVSAHGWSISDLMKRP 261
Query: 149 ILSDL 153
L L
Sbjct: 262 SLKRL 266
>gi|336234728|ref|YP_004587344.1| stage III sporulation protein AA [Geobacillus thermoglucosidasius
C56-YS93]
gi|335361583|gb|AEH47263.1| stage III sporulation protein AA [Geobacillus thermoglucosidasius
C56-YS93]
Length = 308
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+ AR++S ++V IVD +EI G IP +G R+ V
Sbjct: 145 PQTGKTTLLRDAARMISTGILARHIPSQKVGIVDERSEIAGCVKGIPQFQLGN--RVDVL 202
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + A GV + T HG +++++
Sbjct: 203 DACPKAEGMMMMIRSMSPDVLIVDEIGRSEDGEAILEAVNAGVCIWTTVHGRNRKDVLQR 262
Query: 148 PILSDLI 154
P L ++
Sbjct: 263 PTLRPIM 269
>gi|357012942|ref|ZP_09077941.1| stage III sporulation protein AA [Paenibacillus elgii B69]
Length = 328
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 10/128 (7%)
Query: 35 PGVGKTTVMREIARVL----SDEFQKR---VVIVDTSNEIGGD-GDIPHSAIGTARRMQV 86
P GKTT++R++AR+L +D +R + IVD +EI +P +G R V
Sbjct: 161 PQQGKTTLVRDLARLLGTGGADNGLRRSFKIGIVDERSEIAACVKGVPRFDVGY--RTDV 218
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+ + + M+ + + PEV+I DEIG +A A GV +I TAHG + +
Sbjct: 219 LDGCPKAEGMMMMIRSMSPEVLIADEIGRAEDALAIHEALHAGVGVIATAHGRDAAELKR 278
Query: 147 NPILSDLI 154
PIL +L+
Sbjct: 279 RPILRELL 286
>gi|402815122|ref|ZP_10864715.1| stage III sporulation protein AA [Paenibacillus alvei DSM 29]
gi|402507493|gb|EJW18015.1| stage III sporulation protein AA [Paenibacillus alvei DSM 29]
Length = 335
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQK---------RVVIVDTSNEIGGD-GDIPHSAIGTARRM 84
P GKTT++R++AR +S +V IVD +EI G +P +G R
Sbjct: 162 PQHGKTTMLRDMARAVSSGCWNHPQAVWKALKVGIVDERSEIAGCMKGVPSYNLGY--RT 219
Query: 85 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
V + + + ++ + + P+V++VDE G E + A + GV +I + HG +E+I
Sbjct: 220 DVIDGCPKAEGLMMFIRSMSPDVLVVDEFGREEDYDAMQEAIHAGVRMIASVHGSDVEDI 279
Query: 145 IKNPILSDLI 154
++ P L+ L+
Sbjct: 280 LRRPGLASLL 289
>gi|398304497|ref|ZP_10508083.1| stage III sporulation protein AA [Bacillus vallismortis DV1-F-3]
Length = 307
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 7/124 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R++AR+ S + IVD +EI G IP G +R+ V +
Sbjct: 145 PQTGKTTLLRDLARLSSTGKNGMSPAKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDA 202
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + ++ + + PEVIIVDEIG + A GV +I +AHG + +++K P
Sbjct: 203 CPKAEGLMMMIRSMSPEVIIVDEIGRIEDTDALLEALHAGVSVIVSAHGWSISDLMKRPS 262
Query: 150 LSDL 153
L L
Sbjct: 263 LKRL 266
>gi|332652603|ref|ZP_08418348.1| stage III sporulation protein AA [Ruminococcaceae bacterium D16]
gi|332517749|gb|EGJ47352.1| stage III sporulation protein AA [Ruminococcaceae bacterium D16]
Length = 303
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 64/125 (51%), Gaps = 8/125 (6%)
Query: 35 PGVGKTTVMREIARVLS---DEFQKRVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPEP 89
PG GKTT++R++ R++S +RV + D E+ +G +P +G R V E
Sbjct: 156 PGAGKTTLLRDLIRMVSHGEGMTPQRVAVADERGEVAALWNG-VPQLDVG--ERTDVLEG 212
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + ++ + P+V+ DEI + A S A GV L+ TAHG E++ + P+
Sbjct: 213 CPKAQALMMLLRAMNPQVLAADEITAPEDVAALISAAGCGVKLLATAHGSAREDLARRPL 272
Query: 150 LSDLI 154
+L+
Sbjct: 273 YRELM 277
>gi|312110267|ref|YP_003988583.1| stage III sporulation protein AA [Geobacillus sp. Y4.1MC1]
gi|423719293|ref|ZP_17693475.1| stage III sporulation protein AA [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215368|gb|ADP73972.1| stage III sporulation protein AA [Geobacillus sp. Y4.1MC1]
gi|383368196|gb|EID45471.1| stage III sporulation protein AA [Geobacillus thermoglucosidans
TNO-09.020]
Length = 308
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+ AR++S ++V IVD +EI G IP +G R+ V
Sbjct: 145 PQTGKTTLLRDAARMISTGILARHIPSQKVGIVDERSEIAGCVKGIPQFQLGN--RVDVL 202
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+V+IVDEIG + A GV + T HG +++++
Sbjct: 203 DACPKAEGMMMMIRSMSPDVLIVDEIGRSEDGAAILEAVNAGVCIWTTVHGRNRKDVLQR 262
Query: 148 PILSDLI 154
P L ++
Sbjct: 263 PTLRPIM 269
>gi|261405938|ref|YP_003242179.1| stage III sporulation protein AA [Paenibacillus sp. Y412MC10]
gi|261282401|gb|ACX64372.1| stage III sporulation protein AA [Paenibacillus sp. Y412MC10]
Length = 332
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 18/145 (12%)
Query: 22 NKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK-----------RVVIVDTSNEIGGD 70
+++ LS P GKTT++R++AR +S + K +V I+D +EI G
Sbjct: 150 KRVMHSLILSP--PQQGKTTLLRDLARQIS--YGKWGNSSVHWPGMKVGIIDERSEIAGC 205
Query: 71 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 129
+P +G R V + + + M+ + + P+V+IVDEIG +A A G
Sbjct: 206 LRGVPGFDVGP--RTDVMDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVIEALHAG 263
Query: 130 VMLIGTAHGEWLENIIKNPILSDLI 154
+ +I TAHG ++++ P LS L+
Sbjct: 264 ISVIATAHGSSVQDMRGRPALSGLL 288
>gi|329924766|ref|ZP_08279755.1| stage III sporulation protein AA [Paenibacillus sp. HGF5]
gi|328940431|gb|EGG36754.1| stage III sporulation protein AA [Paenibacillus sp. HGF5]
Length = 332
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 18/145 (12%)
Query: 22 NKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK-----------RVVIVDTSNEIGGD 70
+++ LS P GKTT++R++AR +S + K +V I+D +EI G
Sbjct: 150 KRVMHSLILSP--PQQGKTTLLRDLARQIS--YGKWGNSSVHWPGMKVGIIDERSEIAGC 205
Query: 71 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 129
+P +G R V + + + M+ + + P+V+IVDEIG +A A G
Sbjct: 206 LRGVPGFDVGP--RTDVMDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVIEALHAG 263
Query: 130 VMLIGTAHGEWLENIIKNPILSDLI 154
+ +I TAHG ++++ P LS L+
Sbjct: 264 ISVIATAHGSSVQDMRGRPALSGLL 288
>gi|403380881|ref|ZP_10922938.1| stage III sporulation protein AA [Paenibacillus sp. JC66]
Length = 326
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQ--------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 85
P GKTT++R++AR +S + ++V I+D +EI +P +G R
Sbjct: 158 PQHGKTTMLRDLARSISGGYTCGQIRVPGRKVGIIDERSEIAACVKGVPTFDVGP--RTD 215
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
V + + + M+ + + PEV+IVDE+G + +A A G+ ++ TAH L +I
Sbjct: 216 VLDHCPKAEGMMMMIRSMSPEVLIVDELGRDEDAAAVHEAIHAGIQVLATAHAASLGDIE 275
Query: 146 KNPILSDL 153
K P L L
Sbjct: 276 KRPGLRTL 283
>gi|390453349|ref|ZP_10238877.1| stage III sporulation protein AA [Paenibacillus peoriae KCTC 3763]
Length = 331
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 35 PGVGKTTVMREIARVLS---------DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRM 84
P GKTT++R++AR LS +V I+D +EI G IP +G R
Sbjct: 159 PQHGKTTLLRDLARQLSYGGVGSNGGRRSGLKVGIIDERSEIAGSHKGIPGFDVGP--RT 216
Query: 85 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
V + + + M+ + + P+V+IVDEIG +A A R G+ +I +AHG + +
Sbjct: 217 DVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEM 276
Query: 145 IKNPILSDLIGGVDTVTL 162
L+ L G + L
Sbjct: 277 ATRSALAGLTAGQELFQL 294
>gi|114566101|ref|YP_753255.1| stage III sporulation protein spoIIIAA [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114337036|gb|ABI67884.1| stage III sporulation protein spoIIIAA [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 313
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 18 LYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDGDI 73
+ S I+ +S P GKTT++R+IAR +S + I+D +EI G
Sbjct: 149 IISTGTIVNTLIISP--PRCGKTTILRDIARSISTGSSACPPHNIAIIDERSEIAGT--- 203
Query: 74 PHSAIG---TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 130
H + R V + + M+ A+ + P+V+I DEIG + + A + GV
Sbjct: 204 -HRGLAQLDVGIRSDVLDACPKSWGMMMAIRSLSPQVLIADEIGRKEDVEALQECVNAGV 262
Query: 131 MLIGTAHGEWLENIIKNPILSDLI 154
+I + H LE + K P++ L+
Sbjct: 263 AVICSIHARNLEELSKRPLIKKLL 286
>gi|225375604|ref|ZP_03752825.1| hypothetical protein ROSEINA2194_01229 [Roseburia inulinivorans DSM
16841]
gi|225212583|gb|EEG94937.1| hypothetical protein ROSEINA2194_01229 [Roseburia inulinivorans DSM
16841]
Length = 309
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 62/121 (51%), Gaps = 7/121 (5%)
Query: 35 PGVGKTTVMREIARVLSDE----FQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
PG GKTT++R+ R LS+ + +V +VD +EI +P + +G R V +
Sbjct: 154 PGAGKTTLLRDSIRALSNGEAYGIRLKVCVVDERSEIAASFHGVPQNDMGP--RTDVMDG 211
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M + + P++I VDE+G E++ +A G ++GT H ++ + + P
Sbjct: 212 CGKAEGMQLLIRSMSPQIIAVDELGAESDFYAVEQALNCGSRVLGTIHAGNMKELSEKPY 271
Query: 150 L 150
L
Sbjct: 272 L 272
>gi|375309142|ref|ZP_09774423.1| stage III sporulation protein AA [Paenibacillus sp. Aloe-11]
gi|375078451|gb|EHS56678.1| stage III sporulation protein AA [Paenibacillus sp. Aloe-11]
Length = 331
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 35 PGVGKTTVMREIARVLS---------DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRM 84
P GKTT++R++AR LS +V I+D +EI G IP +G R
Sbjct: 159 PQHGKTTLLRDLARQLSYGGVGSNGGRRSGLKVGIIDERSEIAGSHKGIPGFDVGP--RT 216
Query: 85 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
V + + + M+ + + P+V+IVDEIG +A A R G+ +I +AHG + +
Sbjct: 217 DVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEM 276
Query: 145 IKNPILSDLIGGVDTVTL 162
L+ L G + L
Sbjct: 277 ATRSALAGLTAGQELFQL 294
>gi|220929335|ref|YP_002506244.1| stage III sporulation protein AA [Clostridium cellulolyticum H10]
gi|219999663|gb|ACL76264.1| stage III sporulation protein AA [Clostridium cellulolyticum H10]
Length = 331
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 87
P GKTT++R+++R+LS + +V IVD +EI +P S +G R V
Sbjct: 171 PQCGKTTILRDLSRMLSSGETEYGFSGMKVGIVDERSEIAACCKGVPQSDVGY--RTDVM 228
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
+ + M + + PE+II DEIGT + A + G+ +I +AHG
Sbjct: 229 DGCPKALGMEMLLRSMSPEIIITDEIGTHGDKEAILKVLNSGIKIIASAHG 279
>gi|51893000|ref|YP_075691.1| stage III sporulation protein AA [Symbiobacterium thermophilum IAM
14863]
gi|51856689|dbj|BAD40847.1| stage III sporulation protein AA [Symbiobacterium thermophilum IAM
14863]
Length = 292
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
Query: 29 FLSYF---RPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAI 78
FLS P GKTT++R++ R LS + +V +VD +E+ G +P +
Sbjct: 127 FLSTLLVSPPQAGKTTLLRDLVRQLSTGVPRLGLRGLKVGLVDERSEVAGCVCGVPQRDV 186
Query: 79 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
G R V + + + ++ + P+V+ DEIG +A A GV ++ TAHG
Sbjct: 187 GP--RTDVLDGCPKAEGLMLMIRALSPQVVAADEIGRPEDAVAVMEALHAGVAVLATAHG 244
Query: 139 EWLENIIKNPILSDLI 154
L ++ + P L++L+
Sbjct: 245 AGLSDVRRRPALAELL 260
>gi|310642679|ref|YP_003947437.1| stage III sporulation protein aa [Paenibacillus polymyxa SC2]
gi|386041735|ref|YP_005960689.1| stage III sporulation protein AA [Paenibacillus polymyxa M1]
gi|309247629|gb|ADO57196.1| Stage III sporulation protein AA [Paenibacillus polymyxa SC2]
gi|343097773|emb|CCC85982.1| stage III sporulation protein AA [Paenibacillus polymyxa M1]
Length = 331
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 66/138 (47%), Gaps = 12/138 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQK---------RVVIVDTSNEIGGD-GDIPHSAIGTARRM 84
P GKTT++R++AR LS K +V I+D +EI G IP +G R
Sbjct: 159 PQHGKTTLLRDLARQLSYGGMKSNGGRRNGLKVGIIDERSEIAGSHKGIPGFDVGP--RT 216
Query: 85 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+ + + + M+ + + P+V+IVDEIG +A A R G+ +I +AHG + +
Sbjct: 217 DILDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEM 276
Query: 145 IKNPILSDLIGGVDTVTL 162
+ L G + L
Sbjct: 277 ASRSAFAGLATGQELFQL 294
>gi|291562681|emb|CBL41497.1| stage III sporulation protein AA [butyrate-producing bacterium
SS3/4]
Length = 323
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 7/124 (5%)
Query: 35 PGVGKTTVMREIARVLSDE----FQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
PG GKTT++R++ R LS K V +VD +EI G I +G R V +
Sbjct: 166 PGAGKTTLLRDLIRELSCGGTWGAGKNVSVVDERSEIAACFGGIAQCDLGP--RTDVMDG 223
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + M+ + + P+V+ VDE G E E A + G ++ T HG + +I+K P
Sbjct: 224 CPKSEGMLMMLRSMAPQVLAVDEAGGEGEILAMKYGMNCGCRILATVHGADVGDIMKRPA 283
Query: 150 LSDL 153
+L
Sbjct: 284 WREL 287
>gi|291525262|emb|CBK90849.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
DSM 17629]
gi|291529279|emb|CBK94865.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
M104/1]
Length = 313
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 63/117 (53%), Gaps = 9/117 (7%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKR----VVIVDTSNEIGGDG-DIPHSAIGTARRMQVPE 88
RPG GKTT +R+ R+LSD + V +VD +EI + + IG + +
Sbjct: 140 RPGEGKTTFLRDCIRILSDGCDGKNALKVSVVDERSEIAACYLGVAQNDIGNSSDVLDNC 199
Query: 89 P-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
P SL ++++ ++ P+VI VDE+G E++ A + G+ ++G+ HG +++
Sbjct: 200 PKSLGMRMLLRSMS---PDVIAVDELGGESDIEALNQLVSCGIRILGSVHGTNADDL 253
>gi|154502445|ref|ZP_02039505.1| hypothetical protein RUMGNA_00258 [Ruminococcus gnavus ATCC 29149]
gi|336434239|ref|ZP_08614039.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796841|gb|EDN79261.1| stage III sporulation protein AA [Ruminococcus gnavus ATCC 29149]
gi|336014282|gb|EGN44138.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_58FAA]
Length = 313
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEP 89
P GKTT++R++ R +SD V +VD +EIGG + + +G+ R + +
Sbjct: 157 PCGGKTTLIRDLIRQISDGNAHVKGCTVGVVDERSEIGGCYLGVAQNHLGS--RTDILDC 214
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + MI + + P V+ VDEIG + E A + G LI + HG + I P
Sbjct: 215 CPKAEGMIMLIRSMSPRVLAVDEIGAQEEIRAVEYAMQCGCKLIASVHGNSMAEIASKPG 274
Query: 150 LSDLI 154
L +L+
Sbjct: 275 LGELV 279
>gi|311030965|ref|ZP_07709055.1| stage III sporulation protein AA [Bacillus sp. m3-13]
Length = 310
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 67/127 (52%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++AR++S +++ V IVD +EI G IP +G +R+ V
Sbjct: 147 PQTGKTTLLRDLARIMSSGCEEKRVASCKVGIVDERSEIAGCVHGIPQHDLG--QRVDVL 204
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P+VI+VDEIG ++ A GV L+ + H + +
Sbjct: 205 DSCPKAEGMMMMIRSMSPDVIVVDEIGRMEDSEAVMEAVNAGVGLLMSVHAFSFDELKSR 264
Query: 148 PILSDLI 154
P L +++
Sbjct: 265 PSLREIL 271
>gi|433462230|ref|ZP_20419819.1| stage III sporulation protein AA [Halobacillus sp. BAB-2008]
gi|432189119|gb|ELK46252.1| stage III sporulation protein AA [Halobacillus sp. BAB-2008]
Length = 325
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 62/125 (49%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 89
P GKTT++R +++ + + +V +VD +EI +P +G R V +
Sbjct: 145 PHSGKTTLLRALSKWIGSDHTGYRGCKVAVVDERSEIAASLRGVPQLEVGV--RTDVMDG 202
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ M+ + + P+V+IVDEIG +A A R + GV +I + HG L+ + K P
Sbjct: 203 CPKAAGMMMMIRSMSPDVLIVDEIGGLEDADAVREASYTGVQVICSIHGRTLDGVRKRPS 262
Query: 150 LSDLI 154
L+
Sbjct: 263 ARSLV 267
>gi|238924594|ref|YP_002938110.1| stage III sporulation protein AA [Eubacterium rectale ATCC 33656]
gi|238876269|gb|ACR75976.1| stage III sporulation protein AA [Eubacterium rectale ATCC 33656]
Length = 313
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKR----VVIVDTSNEIGGDG-DIPHSAIGTARRMQVPE 88
RPG GKTT +R+ R+LSD + V +VD +EI + + IG + +
Sbjct: 140 RPGEGKTTFLRDCIRILSDGCDGKNALKVSVVDERSEIAACYLGVAQNDIGNSSDVLDNC 199
Query: 89 P-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
P SL ++++ ++ P+VI VDE+G E + A + G+ ++G+ HG +++
Sbjct: 200 PKSLGMRMLLRSMS---PDVIAVDELGGEGDIEALNQLVSCGIRILGSVHGTNADDL 253
>gi|251796305|ref|YP_003011036.1| stage III sporulation protein AA [Paenibacillus sp. JDR-2]
gi|247543931|gb|ACT00950.1| stage III sporulation protein AA [Paenibacillus sp. JDR-2]
Length = 350
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 66/132 (50%), Gaps = 14/132 (10%)
Query: 35 PGVGKTTVMREIARVLS----DEFQ-------KRVVIVDTSNEIGGD-GDIPHSAIGTAR 82
P GKTT++R+IAR +S F+ ++V IVD +EI IP +G
Sbjct: 161 PQQGKTTIVRDIARSISYGHWGLFENAAGWAGRKVGIVDERSEIAACVRGIPTFDVGP-- 218
Query: 83 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 142
R + + + + M+ + + PEV+I DEIG + A R + G+ +I TAH L+
Sbjct: 219 RTDIMDACPKAEGMMMLLRSMSPEVVIADEIGRPEDGEAIREASHAGISVIATAHAYDLQ 278
Query: 143 NIIKNPILSDLI 154
+ P+L L+
Sbjct: 279 DAKGRPVLQQLL 290
>gi|333897006|ref|YP_004470880.1| stage III sporulation protein AA [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112271|gb|AEF17208.1| stage III sporulation protein AA [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 334
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+IAR +S+ + +V IVD +EI IP + +G R V
Sbjct: 166 PQCGKTTLIRDIARNISNGMPELNFHGEKVSIVDERSEIAACFKGIPQNDVGY--RTDVL 223
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ +H ++ + + P+VII DEIG + + GV +I T HG +E++ +
Sbjct: 224 DLCPKHIGILMMIRSMSPKVIITDEIGKVEDIASIHEALNAGVSIITTVHGNDVEDVARK 283
Query: 148 PILSDLI 154
+ +++
Sbjct: 284 KYIDEML 290
>gi|296133231|ref|YP_003640478.1| stage III sporulation protein AA [Thermincola potens JR]
gi|296031809|gb|ADG82577.1| stage III sporulation protein AA [Thermincola potens JR]
Length = 325
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 64/136 (47%), Gaps = 9/136 (6%)
Query: 26 FDFFLSYFRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAI 78
F L P GKTT++R+I R LS+ V +VD +EI G +P +
Sbjct: 158 FQHTLIISPPRCGKTTLLRDIVRQLSNGVPSLGFHGVPVGVVDERSEIAGCFRGVPQKDV 217
Query: 79 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
G R V + + + MI + + P+V+ DEIG + + A + G+ ++ T HG
Sbjct: 218 GI--RTDVLDGCPKAEGMIMLIRSMAPKVVATDEIGRKEDIFALEEVLNAGIKILTTVHG 275
Query: 139 EWLENIIKNPILSDLI 154
+ +++ P L L+
Sbjct: 276 ANMSELVQRPALKYLV 291
>gi|414865049|tpg|DAA43606.1| TPA: hypothetical protein ZEAMMB73_327805 [Zea mays]
Length = 209
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/25 (96%), Positives = 25/25 (100%)
Query: 34 RPGVGKTTVMREIARVLSDEFQKRV 58
RPGVGKTTVMREIARVL+DEFQKRV
Sbjct: 183 RPGVGKTTVMREIARVLADEFQKRV 207
>gi|452992565|emb|CCQ95992.1| Stage III sporulation protein AA [Clostridium ultunense Esp]
Length = 324
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG--DGDIPHSAIGTARRMQV 86
P GKTT++R++ R+LS+ + +V ++D +E+ G +G +P IG R V
Sbjct: 167 PQCGKTTILRDLIRILSNGSKDLGGKGMKVGVIDERSELAGMYNG-MPQFDIGL--RTDV 223
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+ + I + P+++ +DEIG+ + A + GV +I T HG LE+++
Sbjct: 224 LDGCNKKDGTIMLIRAMSPDIVAMDEIGSINDVDAIHEALKAGVKIIATIHGSTLEDLVS 283
Query: 147 NPILSDLI 154
L LI
Sbjct: 284 KKSLRMLI 291
>gi|435853281|ref|YP_007314600.1| stage III sporulation protein AA [Halobacteroides halobius DSM
5150]
gi|433669692|gb|AGB40507.1| stage III sporulation protein AA [Halobacteroides halobius DSM
5150]
Length = 317
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 63/127 (49%), Gaps = 12/127 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGD-GDIPHSAIGTARRM--QV 86
P GKTT++R++ R +S+ K +V +VD +EIGG + + IG + +
Sbjct: 168 PRCGKTTLLRDLVRQISNGIPKQFNGLKVGVVDERSEIGGAYQGVAQNQIGIRTDLLDRA 227
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
P+P + ++ + + P VI+ DEIGT+ + GV +I T HG L +
Sbjct: 228 PKP----EGILLLIRSMSPNVIVTDEIGTKEDVDILLEALNAGVRVITTVHGSNLAEVKS 283
Query: 147 NPILSDL 153
P L+ L
Sbjct: 284 RPSLAKL 290
>gi|134298920|ref|YP_001112416.1| hypothetical protein Dred_1056 [Desulfotomaculum reducens MI-1]
gi|134051620|gb|ABO49591.1| conserved hypothetical protein [Desulfotomaculum reducens MI-1]
Length = 337
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++REI R LS+ + V +VD +EI G +P IG R V
Sbjct: 176 PRCGKTTMLREIIRRLSEGVPELGFSGVTVGVVDERSEIAGCYRGVPQRDIGP--RTDVL 233
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + M+ + + P +I DEIG + + A + GV ++ T HG LE +
Sbjct: 234 DACPKAPGMMMLLRSMGPMIIATDEIGRQEDVAALEEVLNAGVKVLSTVHGATLEELADR 293
Query: 148 PILSDL 153
P L L
Sbjct: 294 PALQYL 299
>gi|407473829|ref|YP_006788229.1| stage III sporulation protein AA [Clostridium acidurici 9a]
gi|407050337|gb|AFS78382.1| stage III sporulation protein AA [Clostridium acidurici 9a]
Length = 326
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG--DGDIPHSAIGTARRMQV 86
P GKTT++R++ R +S+ +V +VD +E+ G +G P + +G R +
Sbjct: 168 PKCGKTTILRDLIRNISNGINSYNFEGLKVGVVDERSELAGTYNGQ-PQNDLG--YRTDI 224
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+ +H ++ + P+VI DE+G + A + GV +I T HG L+++
Sbjct: 225 LDGCYKHDGIMILLRAMSPDVIATDELGHPNDIKAIYEAMKGGVQIISTVHGANLDDVKN 284
Query: 147 NPILSDLI 154
P + D++
Sbjct: 285 KPNIKDIV 292
>gi|253576304|ref|ZP_04853634.1| stage III sporulation protein AA [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844197|gb|EES72215.1| stage III sporulation protein AA [Paenibacillus sp. oral taxon 786
str. D14]
Length = 343
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 12/129 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQK---------RVVIVDTSNEIGGDG-DIPHSAIGTARRM 84
P GKTT++R++AR +S +V ++D +EI G +P +G R
Sbjct: 172 PQQGKTTLIRDLARQISSGTWGHPEASWPGLKVAVIDERSEIAGSKRGVPGFDMGP--RT 229
Query: 85 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
V + + + ++ + + P+VIIVDEIG +A A GV +I TAHG ++++
Sbjct: 230 DVMDGCPKAEGIMMMIRSMSPDVIIVDEIGRPEDAEALAEALHAGVRVIATAHGSSVDDL 289
Query: 145 IKNPILSDL 153
P LS L
Sbjct: 290 AARPALSRL 298
>gi|304407059|ref|ZP_07388713.1| stage III sporulation protein AA [Paenibacillus curdlanolyticus
YK9]
gi|304344046|gb|EFM09886.1| stage III sporulation protein AA [Paenibacillus curdlanolyticus
YK9]
Length = 357
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 62/127 (48%), Gaps = 14/127 (11%)
Query: 35 PGVGKTTVMREIARVLS----------DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARR 83
P GKTT +R++AR +S ++V IVD +EI +P +G R
Sbjct: 161 PRQGKTTFIRDLARSISYGRWRSTAAAGWPGRKVGIVDERSEIAASVRGVPTFDVGP--R 218
Query: 84 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH-GEWLE 142
V + + + M+ + + PEV+IVDEIG E + A R GV +I TAH G+W E
Sbjct: 219 TDVMDACPKAEGMMMMIRSMSPEVLIVDEIGREEDVEAIREAVRAGVSVIATAHAGDWQE 278
Query: 143 NIIKNPI 149
+ I
Sbjct: 279 AAARPAI 285
>gi|421860480|ref|ZP_16292604.1| uncharacterized protein conserved in bacteria [Paenibacillus
popilliae ATCC 14706]
gi|410829962|dbj|GAC43041.1| uncharacterized protein conserved in bacteria [Paenibacillus
popilliae ATCC 14706]
Length = 320
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 20 SINKIIFDFFLSYFR-------PGVGKTTVMREIARVLSDEFQK---------RVVIVDT 63
S+ ++ DF ++ P GKTT++R++ R + +V +VD
Sbjct: 128 SVMPMLLDFKHAHIHHTLIVSPPQQGKTTLLRDLVRAIGSGLWHHPEARWKALKVGVVDE 187
Query: 64 SNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHAC 122
+EI G +P +G R V + + + M+ + + P+V+ VDE G E + A
Sbjct: 188 RSEIAGCIKGVPSYDLGY--RTDVLDGCPKAEGMMMFIRSMSPDVLAVDETGREEDLLAM 245
Query: 123 RSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
GV LI TAH E ++++++ P L L+
Sbjct: 246 SEAMHAGVRLIATAHAEDMDDLLRRPGLRQLL 277
>gi|326201942|ref|ZP_08191812.1| stage III sporulation protein AA [Clostridium papyrosolvens DSM
2782]
gi|325987737|gb|EGD48563.1| stage III sporulation protein AA [Clostridium papyrosolvens DSM
2782]
Length = 323
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 87
P GKTT++R+++R+LS Q+ +V IVD +EI +P + +G +
Sbjct: 163 PQCGKTTILRDLSRMLSSGEQEYDFNGMKVGIVDERSEIAACCKGVPQNDVGYRTDVMDG 222
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
P + M+ + + P +II DEIGT + A + G+ +I +AHG
Sbjct: 223 CPKVLGMEML--LRSMSPGIIITDEIGTHGDRDAVLKVLNSGIKIIASAHG 271
>gi|346722887|ref|YP_001180908.2| AAA ATPase [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|345106858|gb|ABP67717.2| AAA ATPase [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 248
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 9/118 (7%)
Query: 35 PGVGKTTVMREIARVLSD-----EFQK-RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
PG GKTT++R+I R+LS+ F RVV++D +EI S +GT R V +
Sbjct: 97 PGCGKTTLLRDIVRILSNGEINLSFGGFRVVVIDERSEISTYSQ-EQSKLGT--RTFVLD 153
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+ + A+ + P++I +DE+G + A ++ GV +I T HGE L + K
Sbjct: 154 GVDKLNGVFMAIRSLNPQIIAMDELGGPQDYLAVAEASKMGVKVIATMHGENLHELKK 211
>gi|345019757|ref|ZP_08783370.1| stage III sporulation protein AA [Ornithinibacillus scapharcae
TW25]
Length = 328
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 80/153 (52%), Gaps = 13/153 (8%)
Query: 7 VFLLIVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQ----KRVVIVD 62
V + ++ + Y +N +I P GKTT++R+I R++S ++ K+V +VD
Sbjct: 124 VGMEVIPYLYDNKFLNTLIVG------SPQSGKTTLIRDIIRIISSGWKTIPPKKVGVVD 177
Query: 63 TSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 121
+EI IP +G RR V + + + M+ + + PE+++VDEIG++ + A
Sbjct: 178 ERSEIAACLKGIPQHNLG--RRTDVLDACPKAEGMMMMIRSMSPEILVVDEIGSDKDVQA 235
Query: 122 CRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
+ GV +I T HG+ L+ + K P + L+
Sbjct: 236 LMNAINAGVTVICTIHGQTLDELKKRPSIIPLL 268
>gi|357038632|ref|ZP_09100429.1| stage III sporulation protein AA [Desulfotomaculum gibsoniae DSM
7213]
gi|355359424|gb|EHG07186.1| stage III sporulation protein AA [Desulfotomaculum gibsoniae DSM
7213]
Length = 350
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 61/126 (48%), Gaps = 9/126 (7%)
Query: 32 YFRPGVGKTTVMREIARVLSD-----EFQKRVV-IVDTSNEIGG-DGDIPHSAIGTARRM 84
+ P GKTT++R++ R +S+ F R V +VD +EI G +P +G R
Sbjct: 184 FSPPRCGKTTLLRDLVRQVSNGVPGLHFAGRTVGVVDERSEIAGCHRGVPQMDVGV--RT 241
Query: 85 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
V + + + M+ + P+VI+ DEIG + HA + GV +I T HG L +
Sbjct: 242 DVLDGCPKAQGMMILLRAMSPDVIVTDEIGRMEDIHALEEVFNAGVRVIVTIHGSSLREL 301
Query: 145 IKNPIL 150
P L
Sbjct: 302 TNRPAL 307
>gi|397906464|ref|ZP_10507264.1| Stage III sporulation protein AA [Caloramator australicus RC3]
gi|397160421|emb|CCJ34601.1| Stage III sporulation protein AA [Caloramator australicus RC3]
Length = 311
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG-DGDIPHSAIGTARRMQVP 87
PG GKTT++R+I R LSD ++ R+ +VD EI +P +G R V
Sbjct: 160 PGCGKTTLLRDIIRNLSDGNKRLNVRGYRIGVVDERGEIAACHQGVPQLDVGL--RTDVL 217
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+ + + + + PE+I VDEIG + A + + GV +I TAH + I
Sbjct: 218 DSCPKTLGIYMLLRSMGPEIIAVDEIGGLDDTKAIQDALKAGVKIIATAHAGTFDEI 274
>gi|218132216|ref|ZP_03461020.1| hypothetical protein BACPEC_00073 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992875|gb|EEC58875.1| stage III sporulation protein AA [[Bacteroides] pectinophilus ATCC
43243]
Length = 299
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 64/127 (50%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPE 88
PG GKTT++R++ R +S+ + V +VD +EI +G P + +G R V +
Sbjct: 151 PGCGKTTMLRDLIRQISNGNSYYEGQTVGVVDERSEIAACYNGR-PQNDLGI--RTDVLD 207
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 148
+ + M+ V + P VI VDEI T + A R + G +I TAH + + + P
Sbjct: 208 CCPKAEGMVMLVRSMSPRVIAVDEIATPDDIEAVRYVMNCGCSIIATAHAYNADELRQKP 267
Query: 149 ILSDLIG 155
++L+
Sbjct: 268 QFAELLA 274
>gi|392426588|ref|YP_006467582.1| stage III sporulation protein AA [Desulfosporosinus acidiphilus
SJ4]
gi|391356551|gb|AFM42250.1| stage III sporulation protein AA [Desulfosporosinus acidiphilus
SJ4]
Length = 340
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGG-DGDIPHSAIGTARRMQVP 87
P GKTT++R++ R++S+ + V ++D E+ G + +P +G +
Sbjct: 184 PRAGKTTLLRDLIRLISNGVPQMGLEGQSVGVIDERGELAGMNKGLPSYNLGCRTDVLDG 243
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
P + M+ + + P+V+++DE+G E A + GV ++ TAH LE
Sbjct: 244 CPKVYGMTML--IRSMAPQVVVMDELGHHDEIEALKDALRTGVRILCTAHASSLEEAKTR 301
Query: 148 PILSDLI 154
P LS L+
Sbjct: 302 PTLSYLL 308
>gi|313114131|ref|ZP_07799683.1| putative stage III sporulation protein AA [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623540|gb|EFQ06943.1| putative stage III sporulation protein AA [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 297
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 26 FDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD---IPH----SAI 78
F L P GKTT++R+IAR L+ Q+R +VD EI GD +P S I
Sbjct: 149 FIGMLVVGEPDSGKTTLLRQIARELAG-MQRRACVVDERCEIFPPGDSEKMPPLDLLSGI 207
Query: 79 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
R +Q+ A+ P+VI++DE+GT AE A GV + + H
Sbjct: 208 PKERAVQM------------ALRTLSPQVILLDELGTLAETAALEQGFYSGVDFVASVHA 255
Query: 139 EWLENIIKNPILSDL 153
+E + P + L
Sbjct: 256 ASVEEAARRPQVQAL 270
>gi|121534513|ref|ZP_01666336.1| AAA ATPase [Thermosinus carboxydivorans Nor1]
gi|121307006|gb|EAX47925.1| AAA ATPase [Thermosinus carboxydivorans Nor1]
Length = 349
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R LS ++ +V +VD +EI +P +G R+ V
Sbjct: 182 PRCGKTTLLRDIIRQLSSGVRQLNFSGVQVGLVDERSEIAACVSGVPTMDLGP--RVDVL 239
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + ++ + + P+V++ DE+G +A A + GV+++ T HG + I +
Sbjct: 240 DGCPKASGLLMLLRSMAPQVLVTDELGRGEDAAAIQEALHAGVVVVATVHGRDIAGIAQR 299
Query: 148 PILSDLI 154
P + +LI
Sbjct: 300 PYVGELI 306
>gi|205374061|ref|ZP_03226861.1| mutants block sporulation after engulfment [Bacillus coahuilensis
m4-4]
Length = 294
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 35 PGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 88
P GKTT++R++AR +S + +V IVD +EI G +P +G R+ V +
Sbjct: 145 PQSGKTTLLRDLARFVSSGNGQGIPSFKVGIVDERSEIAGCVKGVPQLELGN--RVDVLD 202
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+ + M+ + + P+V++VDEIG + + A GV L+ + HG L+++
Sbjct: 203 GCPKVEGMMMLIRSMSPDVLVVDEIGRKEDGDAILEAVNAGVTLMMSIHGSSLQDV 258
>gi|420156698|ref|ZP_14663538.1| putative stage III sporulation protein AA [Clostridium sp. MSTE9]
gi|394756708|gb|EJF39767.1| putative stage III sporulation protein AA [Clostridium sp. MSTE9]
Length = 337
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ---KRVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPEP 89
P GKTT++R++AR L+ +++ +VD E+ G GD + +G + P
Sbjct: 164 PSTGKTTILRDLARQLAGGGTLPPRKITVVDERGELAGVYRGD-AQNDLGCCCDILDGYP 222
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 137
Q +++A+ + PEVI+ DE+G+E E A + GV LI + H
Sbjct: 223 KSQG--ILQAIRSLSPEVILCDELGSERETAAVEEVVNAGVSLIVSVH 268
>gi|373115236|ref|ZP_09529412.1| stage III sporulation protein AA [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670528|gb|EHO35607.1| stage III sporulation protein AA [Lachnospiraceae bacterium
7_1_58FAA]
Length = 305
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 5 RNVFLLIVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK---RVVIV 61
R V L L+S + LS PG GKTT++R++ R +SD RV +
Sbjct: 130 REVPGLSAAVLDRLWSGGVLQSTLLLSP--PGGGKTTLLRDLIRAVSDGEGGPALRVGVA 187
Query: 62 DTSNEIGG--DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 119
D E+ G+ P +IG R+ V + + ++ + P+V+ DEI +A
Sbjct: 188 DERGELAAMYQGE-PQFSIG--RQTDVLDGCPKGPALLMLLRGMNPQVLAADEITAPEDA 244
Query: 120 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
A A GV L+ TAH LE + P+ L+
Sbjct: 245 AALEMAANCGVSLLCTAHAGSLEELKARPLYRRLL 279
>gi|365842271|ref|ZP_09383300.1| putative stage III sporulation protein AA [Flavonifractor plautii
ATCC 29863]
gi|364576112|gb|EHM53459.1| putative stage III sporulation protein AA [Flavonifractor plautii
ATCC 29863]
Length = 305
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 5 RNVFLLIVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQK---RVVIV 61
R V L L+S + LS PG GKTT++R++ R +SD RV +
Sbjct: 130 REVPGLSAAVLDRLWSGGVLQSTLLLSP--PGGGKTTLLRDLIRAVSDGEGGPALRVGVA 187
Query: 62 DTSNEIGG--DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 119
D E+ G+ P +IG R+ V + + ++ + P+V+ DEI +A
Sbjct: 188 DERGELAAMYQGE-PQFSIG--RQTDVLDGCPKGPALLMLLRGMNPQVLAADEITAPEDA 244
Query: 120 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
A A GV L+ TAH LE + P+ L+
Sbjct: 245 AALEMAANCGVSLLCTAHAGSLEELKARPLYRRLL 279
>gi|376261518|ref|YP_005148238.1| stage III sporulation protein AA [Clostridium sp. BNL1100]
gi|373945512|gb|AEY66433.1| stage III sporulation protein AA [Clostridium sp. BNL1100]
Length = 323
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 9/111 (8%)
Query: 35 PGVGKTTVMREIARVLS------DEFQKRVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 87
P GKTT++R+++R+LS D +V IVD +EI +P S +G +
Sbjct: 163 PQCGKTTILRDLSRMLSSGEAEYDFNGMKVGIVDERSEIAACCKGVPQSDVGYRTDVLDG 222
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
P + M+ + + P +II DEIGT + A + G+ +I +AHG
Sbjct: 223 CPKVLGMEML--LRSMSPGIIITDEIGTHGDRDAILKVLNSGIKIIASAHG 271
>gi|421836386|ref|ZP_16270884.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001627]
gi|409741749|gb|EKN41434.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001627]
Length = 241
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 65/128 (50%), Gaps = 18/128 (14%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFR---------PGVGKTTVMREIARVLSDEF 54
+R++ L ++ +Y+ +K++ + + P GKTT++R+I++ +SD
Sbjct: 106 IRDISSLNIRICREIYNASKLVMPYIVENGHVLNTIIISPPKCGKTTIIRDISKKISDGV 165
Query: 55 Q------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
K+V ++D +EI G +P +G R V + + + ++ A+ + PEV
Sbjct: 166 DALNLKGKKVSVIDERSEIAGSYNGVPQLDVGL--RTDVLDNCPKSEGIVMAIRSMAPEV 223
Query: 108 IIVDEIGT 115
II DEIGT
Sbjct: 224 IICDEIGT 231
>gi|323702758|ref|ZP_08114418.1| stage III sporulation protein AA [Desulfotomaculum nigrificans DSM
574]
gi|323532275|gb|EGB22154.1| stage III sporulation protein AA [Desulfotomaculum nigrificans DSM
574]
Length = 323
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R LS+ + V +VD +EI G +P IG R V
Sbjct: 162 PRCGKTTLLRDLVRRLSEGVPELGLPGMTVGVVDERSEIAGCYRGVPQRDIGP--RTDVL 219
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + M+ + + P+VI DEIG + A + GV ++ T HG LE +
Sbjct: 220 DACPKAAGMMMLLRSMGPQVIATDEIGRPEDIAALEEMVNAGVKVLTTVHGASLEELTDR 279
Query: 148 PILSDL 153
P L L
Sbjct: 280 PALQYL 285
>gi|333924296|ref|YP_004497876.1| stage III sporulation protein AA [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749857|gb|AEF94964.1| stage III sporulation protein AA [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 323
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R LS+ + V +VD +EI G +P IG R V
Sbjct: 162 PRCGKTTLLRDLVRRLSEGVPELGLPGMTVGVVDERSEIAGCYRGVPQRDIGP--RTDVL 219
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + M+ + + P+VI DEIG + A + GV ++ T HG LE +
Sbjct: 220 DACPKAAGMMMLLRSMGPQVIATDEIGRPEDIAALEEMVNAGVKVLTTVHGASLEELTDR 279
Query: 148 PILSDL 153
P L L
Sbjct: 280 PALQYL 285
>gi|154498058|ref|ZP_02036436.1| hypothetical protein BACCAP_02039 [Bacteroides capillosus ATCC
29799]
gi|150273048|gb|EDN00205.1| putative stage III sporulation protein AA [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 314
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 17/165 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFF---------LSYFRPGVGKTTVMREIARVLSDE- 53
LR + L ++ ++ I+ I D L PG GKTT++R+I R +SD
Sbjct: 122 LRRLSSLSIRVARSVPGISAGILDGLTVNGLLQSTLILSPPGGGKTTLLRDIIRAVSDGD 181
Query: 54 --FQKRVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 109
RV I D E+ DG +P +G RR V + + ++ + P+V+
Sbjct: 182 GVTPMRVGIADERGELAAMYDG-LPQLDVG--RRTDVLDGCPKGTALLMLLRGMNPQVLA 238
Query: 110 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
DEI A+ A + A GV L+ TAH E++ P+ L+
Sbjct: 239 ADEITAPADCAALEAAANCGVTLLATAHASGTEDLSSRPLYRRLL 283
>gi|334341607|ref|YP_004546587.1| stage III sporulation protein AA [Desulfotomaculum ruminis DSM
2154]
gi|334092961|gb|AEG61301.1| stage III sporulation protein AA [Desulfotomaculum ruminis DSM
2154]
Length = 337
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 9/126 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R LS+ + V +VD +EI G +P +G R V
Sbjct: 176 PRCGKTTLLRDLIRRLSEGVPELAFPGVNVGVVDERSEIAGCYRGVPQRDVGP--RTDVL 233
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + M+ + + P VI DEIG + + A + GV ++ T HG LE +
Sbjct: 234 DACPKAAGMMMLLRSMGPVVIATDEIGRQEDVAALEEVLNAGVKVLTTVHGSSLEELADR 293
Query: 148 PILSDL 153
P L L
Sbjct: 294 PALQYL 299
>gi|158320654|ref|YP_001513161.1| sporulation stage III protein AA [Alkaliphilus oremlandii OhILAs]
gi|158140853|gb|ABW19165.1| Sporulation stage III protein AA [Alkaliphilus oremlandii OhILAs]
Length = 351
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSD-----EFQK-RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R++S F+ +V +VD +E+G +P + +G +
Sbjct: 184 PQCGKTTLLRDVIRMVSTGVPHMNFRGLKVGVVDERSELGACFQGVPQNDLGPRTDILDS 243
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
P + +M+ + P+VI DEIG E + A G+ LI T H LENI+
Sbjct: 244 CPKAEGIMML--IRAMSPQVIATDEIGREEDMIAIDEAIMAGIKLITTVHSRSLENILSK 301
Query: 148 PILSDLI 154
++ L+
Sbjct: 302 RVVGKLV 308
>gi|169831169|ref|YP_001717151.1| ATPase AAA [Candidatus Desulforudis audaxviator MP104C]
gi|169638013|gb|ACA59519.1| AAA ATPase [Candidatus Desulforudis audaxviator MP104C]
Length = 332
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 9/123 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
PG GKTT++R++ R S + V +VD +EI G +P +G R V
Sbjct: 169 PGCGKTTLLRDLVRQFSAGVPRLGFAGLTVGVVDERSEIAGCYRGVPQLDVGP--RTDVL 226
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + P+VI DEIG + A + GV ++ TAH L+ +
Sbjct: 227 DGCPKAEGMMMLLRAFSPDVIATDEIGRREDVTALEEMLNAGVKILATAHAASLDELRGR 286
Query: 148 PIL 150
P+L
Sbjct: 287 PVL 289
>gi|333979376|ref|YP_004517321.1| stage III sporulation protein AA [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822857|gb|AEG15520.1| stage III sporulation protein AA [Desulfotomaculum kuznetsovii DSM
6115]
Length = 336
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 9/131 (6%)
Query: 30 LSYFRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 82
L + P GKTT++R+I R LS+ + V +VD +E+ G +P +G
Sbjct: 172 LIFSPPRCGKTTLLRDIIRQLSNGAPELDLPGLTVGVVDERSELAGCYRGVPQRDVGV-- 229
Query: 83 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 142
R V + + + MI + + P+VI DEIG + + A + GV ++ T HG L
Sbjct: 230 RTDVLDGCPKAEGMIMLLRSMAPQVIATDEIGRDEDIAALEEVFHAGVRVLVTVHGASLA 289
Query: 143 NIIKNPILSDL 153
+ P L L
Sbjct: 290 ELAARPALQHL 300
>gi|222528982|ref|YP_002572864.1| ATPase AAA [Caldicellulosiruptor bescii DSM 6725]
gi|222455829|gb|ACM60091.1| AAA ATPase [Caldicellulosiruptor bescii DSM 6725]
Length = 313
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 63/116 (54%), Gaps = 9/116 (7%)
Query: 35 PGVGKTTVMREIARVLSDE------FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
PG GKTT++R I R+LS RVV++D +EI + + IG R V +
Sbjct: 158 PGCGKTTLLRNIIRILSSGEGILAGRGLRVVVIDERSEICTENN-DKREIGI--RTFVLD 214
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+ + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E +++I
Sbjct: 215 GVDKLRGILMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVRIIATMHAESIKDI 270
>gi|344995705|ref|YP_004798048.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963924|gb|AEM73071.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
Length = 313
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG-DGDIPHSAIGTARRMQVP 87
PG GKTT++R I R+LS RVV++D +EI D D I R V
Sbjct: 158 PGCGKTTLLRNIIRILSSGEGILAGRGFRVVVIDERSEICAVDNDRREIGI----RTFVL 213
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+ + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E +++I
Sbjct: 214 DGVDKLRGILMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKIIATMHAESVKDI 270
>gi|312127950|ref|YP_003992824.1| aaa atpase [Caldicellulosiruptor hydrothermalis 108]
gi|311777969|gb|ADQ07455.1| AAA ATPase [Caldicellulosiruptor hydrothermalis 108]
Length = 313
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG-DGDIPHSAIGTARRMQVP 87
PG GKTT++R I R+LS RVV++D +EI D D I R V
Sbjct: 158 PGCGKTTLLRNIIRILSSGEGILAGRGFRVVVIDERSEICAVDNDRREIGI----RTFVL 213
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+ + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E +++I
Sbjct: 214 DGVDKLRGILMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKIIATMHAESVKDI 270
>gi|312793180|ref|YP_004026103.1| aaa atpase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180320|gb|ADQ40490.1| AAA ATPase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 313
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG-DGDIPHSAIGTARRMQVP 87
PG GKTT++R I R+LS RVV++D +EI D D I R V
Sbjct: 158 PGCGKTTLLRNIIRILSSGEGILAGRGFRVVVIDERSEICAVDNDRREIGI----RTFVL 213
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+ + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E +++I
Sbjct: 214 DGVDKLRGILMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKIIATMHAESVKDI 270
>gi|224114563|ref|XP_002316796.1| predicted protein [Populus trichocarpa]
gi|222859861|gb|EEE97408.1| predicted protein [Populus trichocarpa]
Length = 64
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 3/61 (4%)
Query: 67 IGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 126
+GG +GT VP P +V IE VENHMP+V ++DEIGT+ EA A +IA
Sbjct: 3 LGGKPLARFQHLGTLFYRIVPSP---FRVFIEEVENHMPQVSVIDEIGTKLEAMAVSTIA 59
Query: 127 E 127
+
Sbjct: 60 Q 60
>gi|147677501|ref|YP_001211716.1| hypothetical protein PTH_1166 [Pelotomaculum thermopropionicum SI]
gi|146273598|dbj|BAF59347.1| Uncharacterized protein conserved in bacteria [Pelotomaculum
thermopropionicum SI]
Length = 329
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 62/127 (48%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R +S+ V +VD +EI G +P +G R V
Sbjct: 168 PRCGKTTMLRDMVRQISNGIPALGFPGLTVGLVDERSEIAGCYRGVPKLDVGI--RTDVL 225
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ + + P VI DEIG + + A + GV ++ TAHG L + +
Sbjct: 226 DGCPKAEGMMMLLRSMSPRVIAADEIGRQEDVDALEEVLNAGVKVLITAHGSSLAELAER 285
Query: 148 PILSDLI 154
P L +++
Sbjct: 286 PALGEVL 292
>gi|78044260|ref|YP_360826.1| sporulation protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77996375|gb|ABB15274.1| putative sporulation protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 315
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 11/122 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG--DGDIPHSAIGTARRMQV 86
P GKTT++R++AR+ ++ + V IVD +EI G+ P +G R V
Sbjct: 156 PRSGKTTMLRDLARIFANGSAQIGIPGIPVGIVDERSEIAACYKGE-PQLDVGI--RADV 212
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+ + + MI + + P++I+ DEIG E + A +A GV + +AH ++++ K
Sbjct: 213 LDGCPKAQGMIILLRSMAPKLIVTDEIGREEDVGALIEVANAGVAVFTSAHARDMDDLKK 272
Query: 147 NP 148
P
Sbjct: 273 RP 274
>gi|312622749|ref|YP_004024362.1| AAA atpase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203216|gb|ADQ46543.1| AAA ATPase [Caldicellulosiruptor kronotskyensis 2002]
Length = 313
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 62/116 (53%), Gaps = 9/116 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
PG GKTT++R I R+LS RVV++D +EI + IG R V +
Sbjct: 158 PGCGKTTLLRNIIRILSSGEGILAGKGFRVVVIDERSEICPKNN-DRREIGI--RTFVLD 214
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+ + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E +++I
Sbjct: 215 GVDKLRGILMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVRIIATMHAESIKDI 270
>gi|258515805|ref|YP_003192027.1| stage III sporulation protein AA [Desulfotomaculum acetoxidans DSM
771]
gi|257779510|gb|ACV63404.1| stage III sporulation protein AA [Desulfotomaculum acetoxidans DSM
771]
Length = 345
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 87
P GKTT++R++ R +S+ V +VD +E+ G +P +G R V
Sbjct: 184 PRCGKTTLLRDLVRQISNGIPSLSFPGTTVGLVDERSELAGCYYGLPQKDVGL--RTDVL 241
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + MI + P+VI DEIG + A + GV +I T H ++ +I+
Sbjct: 242 DACPKAEGMIMLLRAMSPQVIATDEIGRAEDVRALEEVFHAGVKVITTVHAASIKELIQR 301
Query: 148 PILSDLI 154
P L L+
Sbjct: 302 PALKYLL 308
>gi|354558158|ref|ZP_08977414.1| stage III sporulation protein AA [Desulfitobacterium
metallireducens DSM 15288]
gi|353548883|gb|EHC18327.1| stage III sporulation protein AA [Desulfitobacterium
metallireducens DSM 15288]
Length = 337
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 11/127 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGG--DGDIPHSAIGTARRMQV 86
P GKTT++R++ R +SD + V +VD EI G G H + R +
Sbjct: 178 PRAGKTTLLRDLIRCISDGVPNLSLKGQTVGVVDERGEIAGMWQG---HPSYNLGCRTDI 234
Query: 87 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+ + M + + P V+ VDE+G + A GV ++ TAH E E K
Sbjct: 235 LDGCPKAIGMSMLIRSMSPRVVAVDELGHPQDVEAVLDALRTGVSVLSTAHAESGEEAKK 294
Query: 147 NPILSDL 153
P+L L
Sbjct: 295 RPVLKAL 301
>gi|167770749|ref|ZP_02442802.1| hypothetical protein ANACOL_02095 [Anaerotruncus colihominis DSM
17241]
gi|167667344|gb|EDS11474.1| putative stage III sporulation protein AA [Anaerotruncus
colihominis DSM 17241]
Length = 318
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 6/123 (4%)
Query: 35 PGVGKTTVMREIARVLSDE---FQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPS 90
P GKTT++R++AR LS ++V +VD S EIG G + + +G + P
Sbjct: 164 PASGKTTLLRDLARQLSSGTPGVYRKVCVVDESGEIGASSGGLIQNDLGPCCDLLAGYP- 222
Query: 91 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 150
+ K + A+ PE+II DEI TEAE A + GV ++ + H E + + ++
Sbjct: 223 -KAKGLQIAIRYLSPEIIICDEIATEAEIEAVAAAVNSGVAVVTSVHAASFEELYRKRMI 281
Query: 151 SDL 153
L
Sbjct: 282 GRL 284
>gi|414154684|ref|ZP_11411001.1| Stage III sporulation protein AA [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411453515|emb|CCO08905.1| Stage III sporulation protein AA [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 337
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R LS+ + V +VD +EI G IP +G R V
Sbjct: 176 PRCGKTTLLRDLVRRLSEGIPELGWPGSNVGVVDERSEIAGCYRGIPQQDVGP--RTDVL 233
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + M+ + + P VI DEIG + A + GV ++ T HG L +
Sbjct: 234 DACPKAAGMMMLLRSMGPAVIATDEIGRREDVAALEEVLHAGVKVLTTVHGGSLAELADR 293
Query: 148 PILSDL 153
P L L
Sbjct: 294 PALQYL 299
>gi|312134806|ref|YP_004002144.1| aaa atpase [Caldicellulosiruptor owensensis OL]
gi|311774857|gb|ADQ04344.1| AAA ATPase [Caldicellulosiruptor owensensis OL]
Length = 313
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG-DGDIPHSAIGTARRMQVP 87
PG GKTT++R I R+LS RVV++D +EI D D I R V
Sbjct: 158 PGCGKTTLLRNIVRILSSGEGILAGRGFRVVVIDERSEICMVDNDRREIGI----RTFVL 213
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+ + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E +++I
Sbjct: 214 DGVDKLRGVLMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKIIATMHAESVKDI 270
>gi|302872161|ref|YP_003840797.1| AAA ATPase [Caldicellulosiruptor obsidiansis OB47]
gi|302575020|gb|ADL42811.1| AAA ATPase [Caldicellulosiruptor obsidiansis OB47]
Length = 313
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG-DGDIPHSAIGTARRMQVP 87
PG GKTT++R I R+LS RVV++D +EI D D I R V
Sbjct: 158 PGCGKTTLLRNIVRILSSGEGILAGRGFRVVVIDERSEICMVDNDRREIGI----RTFVL 213
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+ + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E +++I
Sbjct: 214 DGVDKLRGVLMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKIIATMHAESVKDI 270
>gi|402571564|ref|YP_006620907.1| stage III sporulation protein AA [Desulfosporosinus meridiei DSM
13257]
gi|402252761|gb|AFQ43036.1| stage III sporulation protein AA [Desulfosporosinus meridiei DSM
13257]
Length = 356
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R +S+ K V +VD E+ G IP +G R V
Sbjct: 198 PRAGKTTLLRDLIRSISNGVPKLRLEGQTVGVVDERGELAGMWQGIPTYDLGL--RTDVL 255
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + M V + P+V+ VDE+G + A GV ++ TAH LE
Sbjct: 256 DGCPKASGMSMMVRSMSPQVLAVDELGHAEDVVAINDALRTGVRILSTAHAGTLEEARSR 315
Query: 148 PILSDLI 154
PI++ L+
Sbjct: 316 PIITHLL 322
>gi|345861748|ref|ZP_08814000.1| stage III sporulation protein AA [Desulfosporosinus sp. OT]
gi|344325141|gb|EGW36667.1| stage III sporulation protein AA [Desulfosporosinus sp. OT]
Length = 315
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R++S+ + V +VD E+ G +P +G R V
Sbjct: 159 PRAGKTTLLRDLIRLISNGVPQLGLMGLTVGVVDERGELAGMWQGVPTYNLGY--RTDVL 216
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + M V + P+VI +DE+G + +A GV ++ TAH +E
Sbjct: 217 DGCPKATGMNMIVRSMAPQVIAMDELGHADDVNALMDALRTGVRILSTAHASSIEEARNR 276
Query: 148 PILSDLI 154
PIL+ L+
Sbjct: 277 PILAHLL 283
>gi|83590379|ref|YP_430388.1| hypothetical protein Moth_1536 [Moorella thermoacetica ATCC 39073]
gi|83573293|gb|ABC19845.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
Length = 350
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 71/167 (42%), Gaps = 18/167 (10%)
Query: 4 LRNVFLLIVKFFYALYSINKIIFDFFLSYFRP---------GVGKTTVMREIARVLSDEF 54
L+N L ++ + + + + L RP GKTT++R++ R+LS
Sbjct: 144 LKNFAGLNLRLARDIPGCARSLIPYLLEGGRPLHTLILSPPRCGKTTLLRDLIRLLSTGV 203
Query: 55 QK------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEV 107
+ V +VD +EI G +P +G R V + + M+ + + PEV
Sbjct: 204 PELKFSGVNVGVVDERSEIAGCWLGVPQLEVGP--RTDVLDRCPKAAGMLMLLRSMGPEV 261
Query: 108 IIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
I DEIG E A + + GV ++ + H LE + P L+
Sbjct: 262 IATDEIGRPEELAALQDVLHAGVTMLASVHAGSLEELQHRPGWGPLL 308
>gi|392960834|ref|ZP_10326299.1| stage III sporulation protein AA [Pelosinus fermentans DSM 17108]
gi|421054408|ref|ZP_15517376.1| stage III sporulation protein AA [Pelosinus fermentans B4]
gi|421057110|ref|ZP_15520000.1| stage III sporulation protein AA [Pelosinus fermentans B3]
gi|421067733|ref|ZP_15529177.1| stage III sporulation protein AA [Pelosinus fermentans A12]
gi|421071270|ref|ZP_15532390.1| stage III sporulation protein AA [Pelosinus fermentans A11]
gi|392440766|gb|EIW18426.1| stage III sporulation protein AA [Pelosinus fermentans B4]
gi|392447186|gb|EIW24440.1| stage III sporulation protein AA [Pelosinus fermentans A11]
gi|392448088|gb|EIW25292.1| stage III sporulation protein AA [Pelosinus fermentans A12]
gi|392454731|gb|EIW31553.1| stage III sporulation protein AA [Pelosinus fermentans DSM 17108]
gi|392463665|gb|EIW39564.1| stage III sporulation protein AA [Pelosinus fermentans B3]
Length = 333
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 35 PGVGKTTVMREIARVLS--DEFQKR--VVIVDTSNEIGGDGDIPHSAIGTAR---RMQVP 87
P GKTT++R++ R +S + K V +VD +EI S I T R V
Sbjct: 172 PRCGKTTILRDLIRQISMGSKIYKGLPVGVVDERSEIAA----CKSGISTVDLGIRTDVL 227
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + M+ + + P V+ DE+G + HA R GV ++ T HG+ L ++
Sbjct: 228 DNCPKAMGMLMLIRSMSPAVVATDELGRAEDIHAVREALNAGVSVVTTVHGKDLNELLHR 287
Query: 148 PILSDLI 154
P + +L+
Sbjct: 288 PYIGELL 294
>gi|442804014|ref|YP_007372163.1| stage III sporulation protein AA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739864|gb|AGC67553.1| stage III sporulation protein AA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 369
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 8/110 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 88
PG+GKTT++R+I R +S + V +VD +EI +P + +G R V
Sbjct: 169 PGMGKTTLLRDIIRSVSSGVENIFDGLNVGVVDERSEIAACYRGVPQNNLGY--RTDVIN 226
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
+ + M + + P VI VDE+G + + + GV ++ TAHG
Sbjct: 227 GINKKEGMEILLRSMSPRVIAVDELGNPDDVYTVLKVMNAGVRILATAHG 276
>gi|295695388|ref|YP_003588626.1| stage III sporulation protein AA [Kyrpidia tusciae DSM 2912]
gi|295410990|gb|ADG05482.1| stage III sporulation protein AA [Kyrpidia tusciae DSM 2912]
Length = 348
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 35 PGVGKTTVMREIARVLS-DEFQKRV-----VIVDTSNEIGGDGDIPH-SAIGTARRMQVP 87
P GKTT++R++A LS + RV +VD +E+ G H +G R V
Sbjct: 177 PQCGKTTLLRDLAYHLSIGAWHPRVPPLKVAVVDERSELAGTFQGRHYHDLGP--RTDVL 234
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M+ V + PEV+I DE+G A+ A GV+++ +AH L++
Sbjct: 235 DGCPKAEGMMMMVRSMSPEVLITDEVGGAADIAALMEAVGSGVVVLASAHAASLDDAESR 294
Query: 148 PILSDLIGG 156
P L L+ G
Sbjct: 295 PALRPLLEG 303
>gi|410667979|ref|YP_006920350.1| stage III sporulation protein AA [Thermacetogenium phaeum DSM
12270]
gi|409105726|gb|AFV11851.1| stage III sporulation protein AA [Thermacetogenium phaeum DSM
12270]
Length = 330
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R LS + V +VD E+ +P +G R+ V
Sbjct: 168 PCAGKTTLLRDIIRSLSYGIPELHFPALSVGVVDERCELAACYQGVPQHDLGP--RVDVL 225
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + MI + + P+VI DEIG + +A + GV ++ T H E + +
Sbjct: 226 DRCPKAAGMIILLRSMAPQVIATDEIGRCEDINAIWEMLYTGVSILATVHASSWEELERR 285
Query: 148 PILSDLI 154
P L D++
Sbjct: 286 PYLQDVV 292
>gi|336427118|ref|ZP_08607122.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336009971|gb|EGN39958.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 319
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 15/112 (13%)
Query: 35 PGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDGDIPHSAIGTAR-----RMQ 85
PG GKTT++R+I R +SD V IVD +EI G S G A+ R
Sbjct: 161 PGCGKTTLLRDIIRQVSDGNPYGGGVTVGIVDERSEIAG------SFQGRAQNDVGLRTD 214
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 137
+ + + + M+ + + P+VI VDE+G+E + A + + G ++ T H
Sbjct: 215 ILDSCPKAEGMMLLIRSMAPKVIGVDELGSEEDIDAMKKVLSCGCAILATIH 266
>gi|347532101|ref|YP_004838864.1| stage III sporulation protein AA [Roseburia hominis A2-183]
gi|345502249|gb|AEN96932.1| stage III sporulation protein AA [Roseburia hominis A2-183]
Length = 316
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 7/125 (5%)
Query: 35 PGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEP 89
PG+GKTT +R++ R LS +V +VD +EI IP + +G R V +
Sbjct: 162 PGIGKTTFLRDLIRQLSAGDAGAPGMKVGVVDERSEIAACHLGIPQNDLGP--RTDVLDG 219
Query: 90 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
+ + + + + P+++ VDE+G + + A + G ++GT H ++ ++ P
Sbjct: 220 CKKTEGIRMLLRSMSPQILAVDELGGKEDFAAVKQALCCGCRVLGTVHAGCVQELLDKPY 279
Query: 150 LSDLI 154
L +
Sbjct: 280 LQACV 284
>gi|421074477|ref|ZP_15535509.1| stage III sporulation protein AA [Pelosinus fermentans JBW45]
gi|392527518|gb|EIW50612.1| stage III sporulation protein AA [Pelosinus fermentans JBW45]
Length = 333
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 11/127 (8%)
Query: 35 PGVGKTTVMREIARVLS--DEFQKR--VVIVDTSNEIGGDGDIPHSAIGTAR---RMQVP 87
P GKTT++R++ R +S K V +VD +EI S I T R V
Sbjct: 172 PRCGKTTILRDLIRQISMGSNIYKGLPVGVVDERSEIAA----CKSGISTVDLGIRTDVL 227
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + M+ + + P V+ DE+G + HA R GV ++ T HG+ L ++
Sbjct: 228 DNCPKAMGMLMLIRSMSPAVVATDELGRAEDIHAVREALNAGVSVVTTVHGKDLSELLHR 287
Query: 148 PILSDLI 154
P + +L+
Sbjct: 288 PYVGELL 294
>gi|384135427|ref|YP_005518141.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339289512|gb|AEJ43622.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 337
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 35 PGVGKTTVMREIARVLS------DEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVP 87
P GKTT++R++AR LS D +V ++D +EI G D IP +G R V
Sbjct: 174 PQCGKTTLVRDVARRLSYGDFAPDNPGLKVAVIDERSEIAGSVDGIPQFDLGP--RADVL 231
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 121
+ + + M+ A+ + P V++ DEIG +A A
Sbjct: 232 DGCPKAEGMMMAIRSLSPHVVVTDEIGRMEDAEA 265
>gi|452993992|emb|CCQ94462.1| Stage III sporulation protein AB (modular protein) [Clostridium
ultunense Esp]
Length = 266
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 100 VENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+ + P+++I DEIG E + A G+ LI TAHGE L+ I K PIL +
Sbjct: 3 IRSMSPQLLITDEIGQEEDVVALLEAINAGIYLIATAHGEKLDEIEKRPILQKI 56
>gi|410657082|ref|YP_006909453.1| Stage III sporulation protein AA [Dehalobacter sp. DCA]
gi|410660119|ref|YP_006912490.1| Stage III sporulation protein AA [Dehalobacter sp. CF]
gi|409019437|gb|AFV01468.1| Stage III sporulation protein AA [Dehalobacter sp. DCA]
gi|409022475|gb|AFV04505.1| Stage III sporulation protein AA [Dehalobacter sp. CF]
Length = 352
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R + + LS+ + V +VD +EI G IP +G +
Sbjct: 186 PRAGKTTMLRFLVKNLSNGVPQLNLKGHTVGVVDERSEIAGMWQGIPSFDLGCRTDVLDR 245
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
P Q +M+ + + PEV+ VDE+G +A A GV ++ T H L+ + K
Sbjct: 246 CPKAQGLIML--IRSMAPEVVAVDELGGREDAAALGEAVRCGVKILATVHAGSLDELQKR 303
Query: 148 PILSDLI 154
L +L+
Sbjct: 304 AHLRELL 310
>gi|374579571|ref|ZP_09652665.1| stage III sporulation protein AA [Desulfosporosinus youngiae DSM
17734]
gi|374415653|gb|EHQ88088.1| stage III sporulation protein AA [Desulfosporosinus youngiae DSM
17734]
Length = 354
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R +S+ + V +VD E+ G +P +G R +
Sbjct: 198 PRAGKTTLLRDLIRSISNGVPQLGLRGQTVGVVDERGELAGMWQGVPTYDLGY--RTDIL 255
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + M V + P+V+ VDE+G + A GV ++ TAH +E
Sbjct: 256 DGCPKARGMSIMVRSMSPQVLAVDELGHREDVIAIADALRTGVQILSTAHAGTIEEARSR 315
Query: 148 PILSDLI 154
P++S+L+
Sbjct: 316 PVISNLL 322
>gi|218289649|ref|ZP_03493869.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
LAA1]
gi|218240299|gb|EED07482.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
LAA1]
Length = 335
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 35 PGVGKTTVMREIARVLS------DEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVP 87
P GKTT++R++AR S D+ +V ++D +EI G D +P +G R V
Sbjct: 172 PQCGKTTLVRDVARRFSYGDFAPDDHGLKVAVIDERSEIAGSVDGVPQFDLGP--RADVL 229
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 121
+ + + M+ A+ + P V++ DEIG +A A
Sbjct: 230 DGCPKAEGMMMAIRSLSPHVVVTDEIGRMEDAEA 263
>gi|150390255|ref|YP_001320304.1| sporulation stage III, protein AA [Alkaliphilus metalliredigens
QYMF]
gi|149950117|gb|ABR48645.1| Sporulation stage III, protein AA [Alkaliphilus metalliredigens
QYMF]
Length = 346
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R+I R +S ++ +V +VD +EI + + +G R V
Sbjct: 178 PQCGKTTLLRDIIRNISRGVEEISLKGHKVGVVDERSEIAASFQGVAQNDLGP--RTDVL 235
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + M+ + P+VI DEIG + A G+ LI T HG L+ I+
Sbjct: 236 DACPKAIGMMMLIRAMSPDVIATDEIGRHEDGMAIEEAIMAGIKLITTVHGNSLDEILGR 295
Query: 148 PILSDLI 154
++ LI
Sbjct: 296 KVIGHLI 302
>gi|430750198|ref|YP_007213106.1| stage III sporulation protein AA [Thermobacillus composti KWC4]
gi|430734163|gb|AGA58108.1| stage III sporulation protein AA [Thermobacillus composti KWC4]
Length = 331
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 59/120 (49%), Gaps = 13/120 (10%)
Query: 35 PGVGKTTVMREIARVLS----------DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARR 83
P GKTT++R+I R +S D ++V +VD +EI +P +G R
Sbjct: 161 PQQGKTTMLRDIIRSVSYGSWPMPEARDWPARKVGVVDERSEIAACVRGVPVFDVGP--R 218
Query: 84 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 143
V + + + M+ + + PE++ DEIG +A A R A GV +I TAH L++
Sbjct: 219 TDVLDACPKAEGMMMLLRSMSPELLAADEIGRPEDAEAIREAAHAGVPVIATAHASDLQD 278
>gi|268608458|ref|ZP_06142185.1| stage III sporulation protein AA [Ruminococcus flavefaciens FD-1]
Length = 330
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Query: 38 GKTTVMREIARVLSDEFQKRVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPEPSLQHKV 95
GKTT++R++ R+ + + ++D+ NEI G P + +G + + +H
Sbjct: 158 GKTTILRDLCRLYGNAV--KCTLIDSRNEIAAVIKGK-PANDVGMLTDIITGKS--RHDG 212
Query: 96 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
+I AV P I DEI ++ A R GV I T H + +E +++ ++ L+
Sbjct: 213 IISAVRTLSPGYIFCDEIADSSDTEAIREGIGCGVKFIATIHADSVEELLRRSVVRTLL 271
>gi|339629557|ref|YP_004721200.1| hypothetical protein TPY_3305 [Sulfobacillus acidophilus TPY]
gi|379007324|ref|YP_005256775.1| hypothetical protein [Sulfobacillus acidophilus DSM 10332]
gi|339287346|gb|AEJ41457.1| hypothetical protein TPY_3305 [Sulfobacillus acidophilus TPY]
gi|361053586|gb|AEW05103.1| hypothetical protein Sulac_1606 [Sulfobacillus acidophilus DSM
10332]
Length = 292
Score = 43.1 bits (100), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 48/103 (46%), Gaps = 1/103 (0%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
P GKTT +R++ R+ S+ RVV++D EI G + V E +
Sbjct: 150 PRSGKTTFLRDLIRLWSNR-GLRVVVIDERLEIAGGSQSEGFSFDVGLHTDVLEAWPKLA 208
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 137
+ A+ P+VI VDEIG+ E A + GV ++ T H
Sbjct: 209 GISVAIRTLGPDVIAVDEIGSVDELAAVSRARQAGVTVLATVH 251
>gi|261366974|ref|ZP_05979857.1| putative stage III sporulation protein AA [Subdoligranulum
variabile DSM 15176]
gi|282571092|gb|EFB76627.1| putative stage III sporulation protein AA [Subdoligranulum
variabile DSM 15176]
Length = 296
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR-RMQVPEPSLQH 93
PG GKTT +R + R LSD + V +VD E+ D G A+ R+ V
Sbjct: 152 PGSGKTTFLRTLVRYLSDT-DEIVCVVDERGELMMSDD------GQAQQRLPVCCDVYTR 204
Query: 94 KVMIEAVENHM----PEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 149
E ++ + P I+ DE+GT A+ A G+ + + H + + + K P
Sbjct: 205 CSKAEGIQMALRCMNPRYIVCDELGTTADTAAVERGVASGICFLASVHCDSPQALQKKPQ 264
Query: 150 LSDLI 154
L+ L
Sbjct: 265 LARLC 269
>gi|392394445|ref|YP_006431047.1| stage III sporulation protein AA [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390525523|gb|AFM01254.1| stage III sporulation protein AA [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 359
Score = 43.1 bits (100), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 58/126 (46%), Gaps = 9/126 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R LSD + V +VD E+ G IP +G R +
Sbjct: 193 PRGGKTTLLRDLIRRLSDGSPGLNLPGQTVGVVDERRELAGMWQGIPAYNLGC--RTDIL 250
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + + + P+V+ VDE+G + A GV ++ TAH ++ +K
Sbjct: 251 DGCPKRMGINMLIRSMAPQVVAVDELGHPEDVEAVLDALRTGVKILSTAHASNMDEALKR 310
Query: 148 PILSDL 153
P L L
Sbjct: 311 PTLRSL 316
>gi|387818104|ref|YP_005678449.1| stage III sporulation protein AA, partial [Clostridium botulinum
H04402 065]
gi|322806146|emb|CBZ03714.1| stage III sporulation protein AA [Clostridium botulinum H04402 065]
Length = 94
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 99 AVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 154
A+ + PEVII DEIGT + + GV LI T HG +E+I P+ +++
Sbjct: 2 AIRSMAPEVIICDEIGTYNDVESILIALNSGVSLITTIHGFGVEDIYNRPVFKEIV 57
>gi|335356398|ref|ZP_08548268.1| type II secretion system protein E [Lactobacillus animalis KCTC
3501]
Length = 324
Score = 42.4 bits (98), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 60/119 (50%), Gaps = 15/119 (12%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PEPSLQHK 94
G GKTT M ++A+ ++ Q++V+ ++ EI D + ++QV P+ + +
Sbjct: 141 GSGKTTAMYQLAK---NQKQQQVMCIEDPIEIREDSFL---------QVQVNPKAQMDYS 188
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 153
+++A H P++ IV EI A A + A G +++ T H +I+ L+DL
Sbjct: 189 TLLKAALRHHPDIFIVGEIRDRQTARAVLTAALSGHLVLSTLHATSAYGVIER--LADL 245
>gi|423073519|ref|ZP_17062258.1| stage III sporulation protein AA [Desulfitobacterium hafniense DP7]
gi|361855597|gb|EHL07560.1| stage III sporulation protein AA [Desulfitobacterium hafniense DP7]
Length = 361
Score = 42.4 bits (98), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R LSD + V +VD E+ G IP +G R +
Sbjct: 195 PRAGKTTLLRDLIRRLSDGSPALNLPGQTVGVVDERRELAGMWQGIPAYNLGC--RTDIL 252
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + + + P+V+ VDE+G + A GV ++ TAH + ++
Sbjct: 253 DGCPKRMGINMLIRSMAPQVVAVDELGHPEDVEAVLDALRTGVKILSTAHAATMSEALRR 312
Query: 148 PILSDL 153
P L L
Sbjct: 313 PTLKAL 318
>gi|219669535|ref|YP_002459970.1| stage III sporulation protein AA [Desulfitobacterium hafniense
DCB-2]
gi|219539795|gb|ACL21534.1| stage III sporulation protein AA [Desulfitobacterium hafniense
DCB-2]
Length = 361
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R LSD + V +VD E+ G IP +G R +
Sbjct: 195 PRAGKTTLLRDLIRRLSDGSPALNLPGQTVGVVDERRELAGMWQGIPAYNLGC--RTDIL 252
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + + + P+V+ VDE+G + A GV ++ TAH + ++
Sbjct: 253 DGCPKRMGINMLIRSMAPQVVAVDELGHPEDVEAVLDALRTGVKILSTAHAATMSEALRR 312
Query: 148 PILSDL 153
P L L
Sbjct: 313 PTLKAL 318
>gi|89895121|ref|YP_518608.1| hypothetical protein DSY2375 [Desulfitobacterium hafniense Y51]
gi|89334569|dbj|BAE84164.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 330
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 57/126 (45%), Gaps = 9/126 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ R LSD + V +VD E+ G +P +G R +
Sbjct: 164 PRAGKTTLLRDLIRRLSDGSPALNLPGQTVGVVDERRELAGMWQGVPAYNLGC--RTDIL 221
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + + + P+V+ VDE+G + A GV ++ TAH + ++
Sbjct: 222 DGCPKRMGINMLIRSMAPQVVAVDELGHPEDVEAVLDALRTGVKILSTAHAATMSEALRR 281
Query: 148 PILSDL 153
P L L
Sbjct: 282 PTLKAL 287
>gi|167750486|ref|ZP_02422613.1| hypothetical protein EUBSIR_01462 [Eubacterium siraeum DSM 15702]
gi|167656637|gb|EDS00767.1| putative stage III sporulation protein AA [Eubacterium siraeum DSM
15702]
Length = 303
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 38 GKTTVMREIARVLSDEFQKRVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPEPSLQHKV 95
GKTT++R++ R + F RV ++D EI +G P +G V +
Sbjct: 159 GKTTILRDLCRCIGGMF--RVSLIDERQEIAAVYNGK-PCLDVGLM--TDVFSGYGKSDG 213
Query: 96 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+I AV P+ I+ DE+G +AE + R G LI TAH + +E +N
Sbjct: 214 IIRAVRCMSPDYIVTDELGADAE--SIRQAVNSGSGLIMTAHADSIEEAYRN 263
>gi|418035514|ref|ZP_12673971.1| hypothetical protein LDBUL1519_00671 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354690503|gb|EHE90451.1| hypothetical protein LDBUL1519_00671 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 333
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
Query: 10 LIVKFFYALYSINKIIFDFF-----LSYFR--------PGVGKTTVMREIARVLSDEFQK 56
L+++ YAL D F L + R G GKTT M E+AR LS K
Sbjct: 112 LVIRIIYALGESRYFFPDQFRDLVDLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TK 169
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
V+ ++ E+ + AR + + +++A H P+V+I+ EI E
Sbjct: 170 MVMTIEDPVEVYEESFFQAQVNAGAR--------ISYASLLKAALRHRPDVLIIGEIRDE 221
Query: 117 AEAHACRSIAERGVMLIGTAHGE 139
AH A G +++ T H +
Sbjct: 222 ETAHLAVDAALSGHLVLATVHAK 244
>gi|385815392|ref|YP_005851783.1| Competence protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|325125429|gb|ADY84759.1| Competence protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 323
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
Query: 10 LIVKFFYALYSINKIIFDFF-----LSYFR--------PGVGKTTVMREIARVLSDEFQK 56
L+++ YAL D F L + R G GKTT M E+AR LS K
Sbjct: 102 LVIRIIYALGESRYFFPDQFRDLVDLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TK 159
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
V+ ++ E+ + AR + + +++A H P+V+I+ EI E
Sbjct: 160 MVMTIEDPVEVYEESFFQAQVNAGAR--------ISYASLLKAALRHRPDVLIIGEIRDE 211
Query: 117 AEAHACRSIAERGVMLIGTAHGE 139
AH A G +++ T H +
Sbjct: 212 ETAHLAVDAALSGHLVLATVHAK 234
>gi|104773768|ref|YP_618748.1| competence protein ComGA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513772|ref|YP_812678.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|103422849|emb|CAI97507.1| Putative competence protein ComGA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116093087|gb|ABJ58240.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 323
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 23/143 (16%)
Query: 10 LIVKFFYALYSINKIIFDFF-----LSYFR--------PGVGKTTVMREIARVLSDEFQK 56
L+++ YAL D F L + R G GKTT M E+AR LS K
Sbjct: 102 LVIRIIYALGESRYFFPDQFRDLVDLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TK 159
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
V+ ++ E+ + AR + + +++A H P+V+I+ EI E
Sbjct: 160 MVMTIEDPVEVYEESFFQAQVNAGAR--------ISYASLLKAALRHRPDVLIIGEIRDE 211
Query: 117 AEAHACRSIAERGVMLIGTAHGE 139
AH A G +++ T H +
Sbjct: 212 ETAHLAVDAALSGHLVLATVHAK 234
>gi|418029142|ref|ZP_12667690.1| hypothetical protein LDBUL1632_00484 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354690860|gb|EHE90802.1| hypothetical protein LDBUL1632_00484 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 323
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 23/143 (16%)
Query: 10 LIVKFFYALYSINKIIFDFF-----LSYFR--------PGVGKTTVMREIARVLSDEFQK 56
L+++ YAL D F L + R G GKTT M E+AR LS K
Sbjct: 102 LVIRIIYALGESRYFFPDQFRDLVDLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TK 159
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
V+ ++ E+ + + + T R + + +++A H P+V+I+ EI E
Sbjct: 160 MVMTIEDPVEVYEE-SFFQAQVNTGAR-------ISYASLLKAALRHRPDVLIIGEIRDE 211
Query: 117 AEAHACRSIAERGVMLIGTAHGE 139
AH A G +++ T H +
Sbjct: 212 ETAHLAVDAALSGHLVLATVHAK 234
>gi|258511760|ref|YP_003185194.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478486|gb|ACV58805.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 334
Score = 40.8 bits (94), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 9/94 (9%)
Query: 35 PGVGKTTVMREIARVLS-DEFQK-----RVVIVDTSNEIGGDGD-IPHSAIGTARRMQVP 87
P GKTT++R++AR S +F +V ++D +EI G D IP +G R V
Sbjct: 171 PQCGKTTLVRDVARRFSYGDFALVDPGLKVAVIDERSEIAGSVDGIPQFDLGP--RADVL 228
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 121
+ + + M+ A+ + P V++ DEIG +A A
Sbjct: 229 DGCPKAEGMMMAIRSLSPHVVVTDEIGRMEDAEA 262
>gi|289743537|gb|ADD20516.1| replication factor C subunit RFC2 [Glossina morsitans morsitans]
Length = 333
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 35 PGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
PGVGKTT ++ +AR+ L D F++ V+ ++ SNE G D+ + I + +V P +H
Sbjct: 61 PGVGKTTTIQCLARILLGDSFKEAVLELNASNERG--IDVVRNKIKMFAQQKVTLPKGRH 118
Query: 94 KVMIEAVENHMPE 106
K++I + M E
Sbjct: 119 KIVILDEADSMTE 131
>gi|365134919|ref|ZP_09343478.1| stage III sporulation protein AA [Subdoligranulum sp. 4_3_54A2FAA]
gi|363613246|gb|EHL64764.1| stage III sporulation protein AA [Subdoligranulum sp. 4_3_54A2FAA]
Length = 308
Score = 40.4 bits (93), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 54/122 (44%), Gaps = 6/122 (4%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT--ARRMQVPEPSLQ 92
PG GKTT++R + LS +K V VD EI + S T + V +
Sbjct: 161 PGSGKTTLLRAVLAELSAAGRKTAV-VDERFEIA---PVEQSGFCTRLPQHCDVLSGYPK 216
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 152
H M A+ P+VI+ DE+G + A A GV L+ T H E + + P +
Sbjct: 217 HIGMQHALRALAPDVIVCDEVGAMEDIAAITQAANAGVGLVVTIHAPDAETLRRRPQYTA 276
Query: 153 LI 154
L+
Sbjct: 277 LL 278
>gi|291557678|emb|CBL34795.1| Uncharacterized protein conserved in bacteria [Eubacterium siraeum
V10Sc8a]
Length = 303
Score = 40.0 bits (92), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 38 GKTTVMREIARVLSDEFQKRVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPEPSLQHKV 95
GKTT++R++ R + F RV ++D EI +G P +G V +
Sbjct: 159 GKTTILRDLCRCIGGMF--RVSLIDERQEIAAVYNGK-PCLDVGLM--TDVFSGYGKTDG 213
Query: 96 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+I AV P+ I+ DE+G +AE + + G LI TAH + +E +N
Sbjct: 214 IIRAVRCMSPDYIVTDELGADAE--SIKQAVNSGSGLIMTAHADSIEEAYRN 263
>gi|160945210|ref|ZP_02092436.1| hypothetical protein FAEPRAM212_02729 [Faecalibacterium prausnitzii
M21/2]
gi|158442941|gb|EDP19946.1| putative stage III sporulation protein AA [Faecalibacterium
prausnitzii M21/2]
Length = 302
Score = 40.0 bits (92), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 62/150 (41%), Gaps = 34/150 (22%)
Query: 2 LRLRNVFLLIVKFFYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIV 61
L LR ++ AL + + F L PG GKTT++R IAR L+ E Q+ V ++
Sbjct: 132 LNLRIARSCVIPLPPALDKLLEQHFTGLLVVGEPGSGKTTLLRTIARTLA-ERQRLVAVI 190
Query: 62 DTSNE-------------IGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVI 108
D E IGG + AR +Q+ A+ P+VI
Sbjct: 191 DERGELFPPEGPLPPLERIGG--------VDKARAVQM------------ALRTLAPQVI 230
Query: 109 IVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
++DE+G+ E A GV I + H
Sbjct: 231 LLDELGSLEETMALEQGFFSGVDFIASIHA 260
>gi|374993713|ref|YP_004969212.1| stage III sporulation protein AA [Desulfosporosinus orientis DSM
765]
gi|357212079|gb|AET66697.1| stage III sporulation protein AA [Desulfosporosinus orientis DSM
765]
Length = 353
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 9/127 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT +R++ R +S+ + V +VD E+ G +P +G +
Sbjct: 196 PRAGKTTFLRDLIRSISNGVPQIGLRGLTVGVVDERGELAGMWQGVPTYDLGLQTDIMDS 255
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
P M+ V + P+V+ +DEIG + A GV ++ TAH E +
Sbjct: 256 CPKASGLSML--VRSMSPQVVAMDEIGHMDDVAAITDALRTGVRILCTAHASSFEEAHRR 313
Query: 148 PILSDLI 154
P ++ L+
Sbjct: 314 PAIAALL 320
>gi|408411471|ref|ZP_11182629.1| Putative competence protein ComGA [Lactobacillus sp. 66c]
gi|407874386|emb|CCK84435.1| Putative competence protein ComGA [Lactobacillus sp. 66c]
Length = 324
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 95
G GKTT M E+A+ LS K V+ ++ E+ +G + I P + +
Sbjct: 142 GSGKTTTMYELAKRLSQT--KMVMTIEDPVEVH-EGSFLQTQIN-------PVAGISYLS 191
Query: 96 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 139
+++A H P+V+I+ EI AH A G +++ T H +
Sbjct: 192 LLKAALRHRPDVLIIGEIRDSETAHLAVDAALSGHLVLATVHAK 235
>gi|325290033|ref|YP_004266214.1| stage III sporulation protein AA [Syntrophobotulus glycolicus DSM
8271]
gi|324965434|gb|ADY56213.1| stage III sporulation protein AA [Syntrophobotulus glycolicus DSM
8271]
Length = 344
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTTV+R + + LS+ + V +VD EI G IP +G +
Sbjct: 178 PRAGKTTVLRMLIKTLSNGLPAIQLAGQPVGVVDERGEIAGIWQGIPAFDLGIRTDILDR 237
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
P M+ + + P V+ VDE+G + + GV +I TAH +E I
Sbjct: 238 TPKALGIAML--IRSMSPSVVAVDELGAPEDVRSLEDAVRCGVKIIATAHAGSIEEI 292
>gi|21227723|ref|NP_633645.1| divalent cation transport protein [Methanosarcina mazei Go1]
gi|20906121|gb|AAM31317.1| divalent cation transport protein [Methanosarcina mazei Go1]
Length = 373
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRM 84
G GKTT ++ I+R LSD ++ +IV+ EIG DGD +S T R +
Sbjct: 29 GSGKTTAIQRISRQLSDAGKRTAIIVNEIGEIGLDGDTLNSPGITTREL 77
>gi|308503414|ref|XP_003113891.1| CRE-MMAA-1 protein [Caenorhabditis remanei]
gi|308263850|gb|EFP07803.1| CRE-MMAA-1 protein [Caenorhabditis remanei]
Length = 399
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 35/182 (19%)
Query: 16 YALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVD---TSNEIGGDGD 72
Y Y + +IF +S PGVGK++ + + L++ K+V ++ TS GG
Sbjct: 115 YKKYGRDSMIFRVGIS-GSPGVGKSSFIEALGAELTENRGKKVAVLTIDPTSAMTGG--- 170
Query: 73 IPHSAIGTARRMQVPEPSLQHKVMI-----------------EAV---ENHMPEVIIVDE 112
S +G RMQ E S K I EAV E +++I++
Sbjct: 171 ---SVLGDLTRMQ--ELSRNPKAYIRQSPTSGSLGGVTRGIHEAVILCEGAGYDIVIIET 225
Query: 113 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI-LSDLIGGVDTVTLGDEEARARR 171
+G + + + +L+ AHG+ L+ + + + +SDL+ V T GD +A+A+
Sbjct: 226 VGVGQSETSVSDMCDMMCLLLSPAHGDELQGVKRGIMEMSDLL--VVTKDDGDLQAKAKM 283
Query: 172 CQ 173
Q
Sbjct: 284 TQ 285
>gi|317122021|ref|YP_004102024.1| ATPase AAA [Thermaerobacter marianensis DSM 12885]
gi|315592001|gb|ADU51297.1| AAA ATPase [Thermaerobacter marianensis DSM 12885]
Length = 391
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 23/153 (15%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFFLSYFR-------------PGVGKTTVMREIARV 49
R R V L+++ A+ + + + R P GKTT++R++AR+
Sbjct: 171 RFRRVRGLVIRRARAVEGCAAPLLPWLVERGRAGPRLASTLLLGPPASGKTTLLRDLARL 230
Query: 50 LSDEFQ-----KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHM 104
+RV +VD E+ G A R V E + ++ A+
Sbjct: 231 AGTGLPGRLTAQRVAVVDERGELAAGG-----AFDLGPRTAVLEHCPKQAGIVLALRALS 285
Query: 105 PEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 137
PEV+I DE+G +A A GV ++ TAH
Sbjct: 286 PEVLITDELGGPGDAVAVADAVRAGVTVVATAH 318
>gi|409350672|ref|ZP_11233720.1| Putative competence protein ComGA [Lactobacillus equicursoris CIP
110162]
gi|407877292|emb|CCK85778.1| Putative competence protein ComGA [Lactobacillus equicursoris CIP
110162]
Length = 324
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 49/104 (47%), Gaps = 10/104 (9%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 95
G GKTT M E+A+ LS K V+ ++ E+ +G + I P + +
Sbjct: 142 GSGKTTTMYELAKRLSQT--KMVMTIEDPVEVH-EGSFLQTQIN-------PVAGISYLS 191
Query: 96 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 139
+++A H P+V+I+ EI AH A G +++ T H +
Sbjct: 192 LLKAALRHRPDVLIIGEIRDSETAHLAVDAALSGHLVLATVHAK 235
>gi|313123375|ref|YP_004033634.1| type ii secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|312279938|gb|ADQ60657.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 323
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 59/143 (41%), Gaps = 23/143 (16%)
Query: 10 LIVKFFYALYSINKIIFDFF-----LSYFR--------PGVGKTTVMREIARVLSDEFQK 56
L+++ YAL D F L + R G GKTT M E+AR LS K
Sbjct: 102 LVIRIIYALGESRYFFPDQFRDLVDLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TK 159
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
V+ ++ E+ + A + + +++A H P+V+I+ EI E
Sbjct: 160 MVMTIEDPVEVYEESFFQAQVNAGA--------GISYASLLKAALRHRPDVLIIGEIRDE 211
Query: 117 AEAHACRSIAERGVMLIGTAHGE 139
AH A G +++ T H +
Sbjct: 212 ETAHLAVDAALSGHLVLATVHAK 234
>gi|410584372|ref|ZP_11321475.1| hypothetical protein ThesuDRAFT_00062 [Thermaerobacter subterraneus
DSM 13965]
gi|410504307|gb|EKP93818.1| hypothetical protein ThesuDRAFT_00062 [Thermaerobacter subterraneus
DSM 13965]
Length = 403
Score = 39.3 bits (90), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 63/153 (41%), Gaps = 23/153 (15%)
Query: 3 RLRNVFLLIVKFFYALYSINKIIFDFFLSYFRPG-------------VGKTTVMREIARV 49
R R V L+++ + + + + RPG GKTT++R++AR+
Sbjct: 198 RFRRVRGLVIRRARPVSGCATPLLPYLVEPARPGPCLASTLLIGAPASGKTTLLRDLARL 257
Query: 50 LSDEFQ-----KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHM 104
S +RV +VD E+ G A R V E + + A+
Sbjct: 258 ASAGVPGTLAGRRVAVVDERGELAAGG-----AFDLGPRTAVLEHCPKEAGIPLALRALS 312
Query: 105 PEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 137
PEV++ DE+G +A A GV ++ TAH
Sbjct: 313 PEVLVTDELGGPHDAAAVAEAVHAGVTVVATAH 345
>gi|281420206|ref|ZP_06251205.1| negative regulator of genetic competence [Prevotella copri DSM
18205]
gi|281405701|gb|EFB36381.1| negative regulator of genetic competence [Prevotella copri DSM
18205]
Length = 892
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 45/182 (24%)
Query: 35 PGVGKTTVMREIARVLSDE------FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 88
PGVGK+ ++ +A++++++ F KR+V +D + + G T R Q E
Sbjct: 286 PGVGKSAIVEGLAQLINNQETSPMFFNKRLVSLDLTAIVAG----------TKFRGQFEE 335
Query: 89 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW---LENII 145
+ K +I+ +ENH +I +DEI T +IG GE NI+
Sbjct: 336 ---RIKNVIKELENHPEIIIFIDEIHT----------------MIGAGSGEGSMDAANIL 376
Query: 146 KNPILSDLIGGVDTVTLGD-------EEARARRCQKSILERKAPPTFYFLIEMRERHYWV 198
K + +I + TL + + A RR QK ++E ++ ++HY
Sbjct: 377 KPALARGIIQCIGATTLDEYRKSIEKDGALERRFQKVLVEPTTREETLLILHNIKQHYEK 436
Query: 199 TH 200
H
Sbjct: 437 HH 438
>gi|422845361|ref|ZP_16892071.1| competence protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|325684533|gb|EGD26697.1| competence protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 333
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 59/144 (40%), Gaps = 23/144 (15%)
Query: 9 LLIVKFFYALYSINKIIFDFF-----LSYFR--------PGVGKTTVMREIARVLSDEFQ 55
LL+++ YAL D F L + R G GKTT M E+ R LS
Sbjct: 111 LLVIRIIYALGESRYFFPDQFRDLVGLCWLRGMIVTSGPTGSGKTTTMYELPRKLSQ--T 168
Query: 56 KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGT 115
K V+ ++ E+ + A + + +++A H P+V+I+ EI
Sbjct: 169 KMVMTIEDPVEVYEESFFQAQVNAGA--------GISYASLLKAALRHRPDVLIIGEIRD 220
Query: 116 EAEAHACRSIAERGVMLIGTAHGE 139
E AH A G +++ T H +
Sbjct: 221 EETAHLAVDAALSGHLVLATVHAK 244
>gi|341899733|gb|EGT55668.1| hypothetical protein CAEBREN_16185 [Caenorhabditis brenneri]
Length = 298
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 35/182 (19%)
Query: 16 YALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVD---TSNEIGGDGD 72
Y Y + +IF +S PGVGK++ + + L++ K+V ++ TS GG
Sbjct: 14 YKKYGRDAMIFRVGIS-GSPGVGKSSFIEALGAELTENRGKKVAVLTIDPTSAMTGG--- 69
Query: 73 IPHSAIGTARRMQVPEPSLQHKVMI-----------------EAV---ENHMPEVIIVDE 112
S +G RMQ E S K I EAV E +++I++
Sbjct: 70 ---SVLGDLTRMQ--ELSRNPKAYIRQSPTSGSLGGVTRGIHEAVILCEGAGYDIVIIET 124
Query: 113 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI-LSDLIGGVDTVTLGDEEARARR 171
+G + + + +L+ AHG+ L+ + + + +SDL+ V T GD +A+A+
Sbjct: 125 VGVGQSETSVSDMCDMMCLLLSPAHGDELQGVKRGIMEMSDLL--VVTKDDGDLKAKAKM 182
Query: 172 CQ 173
Q
Sbjct: 183 TQ 184
>gi|194866271|ref|XP_001971841.1| GG14218 [Drosophila erecta]
gi|190653624|gb|EDV50867.1| GG14218 [Drosophila erecta]
Length = 331
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 35 PGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V P +H
Sbjct: 58 PGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKVTLPRGRH 115
Query: 94 KVMIEAVENHMPE 106
K++I + M E
Sbjct: 116 KIVILDEADSMTE 128
>gi|125977992|ref|XP_001353029.1| GA13416 [Drosophila pseudoobscura pseudoobscura]
gi|195172285|ref|XP_002026929.1| GL12737 [Drosophila persimilis]
gi|54641780|gb|EAL30530.1| GA13416 [Drosophila pseudoobscura pseudoobscura]
gi|194112697|gb|EDW34740.1| GL12737 [Drosophila persimilis]
Length = 331
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 35 PGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V P +H
Sbjct: 58 PGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKVTLPKGRH 115
Query: 94 KVMIEAVENHMPE 106
K++I + M E
Sbjct: 116 KIVILDEADSMTE 128
>gi|195440776|ref|XP_002068216.1| GK10084 [Drosophila willistoni]
gi|194164301|gb|EDW79202.1| GK10084 [Drosophila willistoni]
Length = 333
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 35 PGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V P +H
Sbjct: 60 PGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKVTLPKGRH 117
Query: 94 KVMIEAVENHMPE 106
K++I + M E
Sbjct: 118 KIVILDEADSMTE 130
>gi|194750805|ref|XP_001957720.1| GF23886 [Drosophila ananassae]
gi|190625002|gb|EDV40526.1| GF23886 [Drosophila ananassae]
Length = 331
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 35 PGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V P +H
Sbjct: 58 PGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKVTLPRGRH 115
Query: 94 KVMIEAVENHMPE 106
K++I + M E
Sbjct: 116 KIVILDEADSMTE 128
>gi|195337341|ref|XP_002035287.1| GM14011 [Drosophila sechellia]
gi|194128380|gb|EDW50423.1| GM14011 [Drosophila sechellia]
Length = 331
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 35 PGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V P +H
Sbjct: 58 PGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKVTLPRGRH 115
Query: 94 KVMIEAVENHMPE 106
K++I + M E
Sbjct: 116 KIVILDEADSMTE 128
>gi|195587662|ref|XP_002083580.1| GD13291 [Drosophila simulans]
gi|194195589|gb|EDX09165.1| GD13291 [Drosophila simulans]
Length = 331
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 35 PGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V P +H
Sbjct: 58 PGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKVTLPRGRH 115
Query: 94 KVMIEAVENHMPE 106
K++I + M E
Sbjct: 116 KIVILDEADSMTE 128
>gi|17647857|ref|NP_523915.1| replication factor C subunit 4 [Drosophila melanogaster]
gi|1703054|sp|P53034.1|RFC2_DROME RecName: Full=Replication factor C subunit 2; AltName:
Full=Activator 1 40 kDa subunit; Short=A1 40 kDa
subunit; AltName: Full=Activator 1 subunit 2; AltName:
Full=Replication factor C 40 kDa subunit; Short=RF-C 40
kDa subunit; Short=RFC40; AltName: Full=Replication
factor C subunit 4; Short=DmRfc4
gi|639708|gb|AAB60241.1| rfc40 [Drosophila melanogaster]
gi|7292439|gb|AAF47843.1| replication factor C subunit 4 [Drosophila melanogaster]
gi|20151645|gb|AAM11182.1| LD40483p [Drosophila melanogaster]
gi|220944360|gb|ACL84723.1| RfC40-PA [synthetic construct]
gi|220954324|gb|ACL89705.1| RfC40-PA [synthetic construct]
Length = 331
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 35 PGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V P +H
Sbjct: 58 PGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKVTLPRGRH 115
Query: 94 KVMIEAVENHMPE 106
K++I + M E
Sbjct: 116 KIVILDEADSMTE 128
>gi|195491632|ref|XP_002093645.1| GE20646 [Drosophila yakuba]
gi|194179746|gb|EDW93357.1| GE20646 [Drosophila yakuba]
Length = 331
Score = 38.5 bits (88), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 35 PGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V P +H
Sbjct: 58 PGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKVTLPRGRH 115
Query: 94 KVMIEAVENHMPE 106
K++I + M E
Sbjct: 116 KIVILDEADSMTE 128
>gi|431794356|ref|YP_007221261.1| stage III sporulation protein AA [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784582|gb|AGA69865.1| stage III sporulation protein AA [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 349
Score = 38.1 bits (87), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 56/123 (45%), Gaps = 9/123 (7%)
Query: 35 PGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVP 87
P GKTT++R++ + +SD + V +VD E+ G IP +G R +
Sbjct: 185 PRAGKTTLLRDLIQKISDGSPTLHTQGQTVGVVDERRELAGMWQGIPAYNLGY--RTDIL 242
Query: 88 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 147
+ + + + + P+VI VDE+G + A GV ++ TAH LE +
Sbjct: 243 DGCPKRMGINMLIRSMSPQVIAVDELGHPEDVEAVLDALRTGVKILSTAHALNLEEALSR 302
Query: 148 PIL 150
P L
Sbjct: 303 PTL 305
>gi|300681240|sp|A8XGZ9.2|MMAA1_CAEBR RecName: Full=Methylmalonic aciduria type A homolog, mitochondrial;
AltName: Full=Methylmalonic aciduria type A protein 1;
Flags: Precursor
Length = 412
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 35/182 (19%)
Query: 16 YALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVD---TSNEIGGDGD 72
Y Y + +IF +S PGVGK++ + + L++ K+V ++ TS GG
Sbjct: 116 YKKYGRDSMIFRVGIS-GSPGVGKSSFIEALGAELTENRGKKVAVLTIDPTSAMTGG--- 171
Query: 73 IPHSAIGTARRMQVPEPSLQHKVMI-----------------EAV---ENHMPEVIIVDE 112
S +G RMQ E S + I EAV E +++I++
Sbjct: 172 ---SVLGDLTRMQ--ELSRNPRAYIRQSPTSGSLGGVTRGIHEAVILCEGAGYDIVIIET 226
Query: 113 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI-LSDLIGGVDTVTLGDEEARARR 171
+G + + + +L+ AHG+ L+ + + + +SDL+ V T GD +A+A+
Sbjct: 227 VGVGQSETSVSDMCDMMCLLLSPAHGDELQGVKRGIMEMSDLL--VVTKDDGDLQAKAKM 284
Query: 172 CQ 173
Q
Sbjct: 285 TQ 286
>gi|268562539|ref|XP_002646687.1| C. briggsae CBR-MMAA-1 protein [Caenorhabditis briggsae]
Length = 298
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 35/182 (19%)
Query: 16 YALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVD---TSNEIGGDGD 72
Y Y + +IF +S PGVGK++ + + L++ K+V ++ TS GG
Sbjct: 14 YKKYGRDSMIFRVGIS-GSPGVGKSSFIEALGAELTENRGKKVAVLTIDPTSAMTGG--- 69
Query: 73 IPHSAIGTARRMQVPEPSLQHKVMI-----------------EAV---ENHMPEVIIVDE 112
S +G RMQ E S + I EAV E +++I++
Sbjct: 70 ---SVLGDLTRMQ--ELSRNPRAYIRQSPTSGSLGGVTRGIHEAVILCEGAGYDIVIIET 124
Query: 113 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI-LSDLIGGVDTVTLGDEEARARR 171
+G + + + +L+ AHG+ L+ + + + +SDL+ V T GD +A+A+
Sbjct: 125 VGVGQSETSVSDMCDMMCLLLSPAHGDELQGVKRGIMEMSDLL--VVTKDDGDLQAKAKM 182
Query: 172 CQ 173
Q
Sbjct: 183 TQ 184
>gi|257439784|ref|ZP_05615539.1| putative stage III sporulation protein AA [Faecalibacterium
prausnitzii A2-165]
gi|257197804|gb|EEU96088.1| putative stage III sporulation protein AA [Faecalibacterium
prausnitzii A2-165]
Length = 326
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Query: 26 FDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 85
F L PG GKTT++R IAR L + QK + ++D E+ + G A +
Sbjct: 180 FIGMLLVGEPGSGKTTLLRSIARELVRQ-QKILSVIDERREL-----FAGNTHGEALDVL 233
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
P Q M A+ P+VI++DE+G E A GV I T H E
Sbjct: 234 AGLPKGQAVQM--ALRTLSPQVILLDELGGLDEVTALEQGLFSGVDFIATLHAATPEEAT 291
Query: 146 KNP 148
P
Sbjct: 292 MRP 294
>gi|195135525|ref|XP_002012183.1| GI16571 [Drosophila mojavensis]
gi|193918447|gb|EDW17314.1| GI16571 [Drosophila mojavensis]
Length = 331
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 35 PGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
PGVGKTT ++ +AR+ L D ++ V+ ++ SNE G D+ + I + +V P +H
Sbjct: 58 PGVGKTTTIQCLARILLGDSYKDAVLELNASNERG--IDVVRNKIKMFAQQKVTLPRGRH 115
Query: 94 KVMIEAVENHMPE 106
K++I + M E
Sbjct: 116 KIVILDEADSMTE 128
>gi|421147451|ref|ZP_15607139.1| competence protein ComGA [Streptococcus agalactiae GB00112]
gi|401685883|gb|EJS81875.1| competence protein ComGA [Streptococcus agalactiae GB00112]
Length = 323
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 31/140 (22%)
Query: 36 GVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP-SLQH 93
G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E + +
Sbjct: 142 GSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNEDIGMTY 189
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------------- 138
+I+ H P+++I+ EI +A A A + GVM+ T H
Sbjct: 190 DALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSIPGVYDRLIELGV 249
Query: 139 --EWLENIIKNPILSDLIGG 156
+ LEN +K LIGG
Sbjct: 250 NYQELENSLKLIAYQRLIGG 269
>gi|25010234|ref|NP_734629.1| hypothetical protein gbs0159 [Streptococcus agalactiae NEM316]
gi|77413407|ref|ZP_00789600.1| competence protein CglA [Streptococcus agalactiae 515]
gi|23094586|emb|CAD45804.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160577|gb|EAO71695.1| competence protein CglA [Streptococcus agalactiae 515]
Length = 323
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 36 GVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP-SLQH 93
G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E + +
Sbjct: 142 GSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNEDIGMTY 189
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+I+ H P+++I+ EI +A A A + GVM+ T H + + +
Sbjct: 190 DALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSISGV 240
>gi|195375032|ref|XP_002046307.1| GJ12823 [Drosophila virilis]
gi|194153465|gb|EDW68649.1| GJ12823 [Drosophila virilis]
Length = 331
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 35 PGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
PGVGKTT ++ +AR+ L D ++ V+ ++ SNE G D+ + I + +V P +H
Sbjct: 58 PGVGKTTTIQCLARILLGDSYKDAVLELNASNERG--IDVVRNKIKMFAQQKVTLPRGRH 115
Query: 94 KVMIEAVENHMPE 106
K++I + M E
Sbjct: 116 KIVILDEADSMTE 128
>gi|167628405|ref|YP_001678904.1| stage iii sporulation protein aa [Heliobacterium modesticaldum
Ice1]
gi|167591145|gb|ABZ82893.1| stage iii sporulation protein aa [Heliobacterium modesticaldum
Ice1]
Length = 137
Score = 38.1 bits (87), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 73 IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVML 132
+P + +G R V + + + ++ + + P+V+ DEIG E + A GV L
Sbjct: 14 VPQNDVGP--RTDVLDGCPKAEGLLRLLRSMGPQVLATDEIGREEDVLAIEEAVHSGVTL 71
Query: 133 IGTAHGEWLENIIKNPILSDLI 154
+ TAHG E ++ P L ++
Sbjct: 72 LATAHGRNREELLTRPGLERML 93
>gi|195012119|ref|XP_001983484.1| GH15919 [Drosophila grimshawi]
gi|193896966|gb|EDV95832.1| GH15919 [Drosophila grimshawi]
Length = 331
Score = 38.1 bits (87), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 35 PGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 93
PGVGKTT ++ +AR+ L D ++ V+ ++ SNE G D+ + I + +V P +H
Sbjct: 58 PGVGKTTTIQCLARILLGDSYKDAVLELNASNERG--IDVVRNKIKMFAQQKVTLPRGRH 115
Query: 94 KVMIEAVENHMPE 106
K++I + M E
Sbjct: 116 KIVILDEADSMTE 128
>gi|452210203|ref|YP_007490317.1| CobW nucleotide-binding domain protein [Methanosarcina mazei
Tuc01]
gi|452100105|gb|AGF97045.1| CobW nucleotide-binding domain protein [Methanosarcina mazei
Tuc01]
Length = 371
Score = 37.7 bits (86), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 12/64 (18%)
Query: 16 YALYSINK-------IIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIG 68
+ L+S NK +I FL G GKTT ++ I+R LSD ++ +IV+ EIG
Sbjct: 5 HNLFSGNKDRKNMKVMIIGGFL-----GSGKTTAIQRISRQLSDAGKRTAIIVNEIGEIG 59
Query: 69 GDGD 72
DGD
Sbjct: 60 LDGD 63
>gi|77406337|ref|ZP_00783400.1| competence protein CglA [Streptococcus agalactiae H36B]
gi|77175042|gb|EAO77848.1| competence protein CglA [Streptococcus agalactiae H36B]
Length = 323
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 31/140 (22%)
Query: 36 GVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP-SLQH 93
G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E + +
Sbjct: 142 GSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNEDIGMTY 189
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------------- 138
+I+ H P+++I+ EI +A A A + GVM T H
Sbjct: 190 DALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMFFSTIHAKSIPGVYDRLIELGV 249
Query: 139 --EWLENIIKNPILSDLIGG 156
+ LEN +K LIGG
Sbjct: 250 NYQELENSLKLIAYQRLIGG 269
>gi|421532800|ref|ZP_15979146.1| competence protein ComGA [Streptococcus agalactiae STIR-CD-17]
gi|403641900|gb|EJZ02807.1| competence protein ComGA [Streptococcus agalactiae STIR-CD-17]
Length = 323
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 31/140 (22%)
Query: 36 GVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP-SLQH 93
G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E + +
Sbjct: 142 GSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNEDIGMTY 189
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------------- 138
+I+ H P+++I+ EI +A A A + GVM+ T H
Sbjct: 190 DALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSIPGVYDRLIELGV 249
Query: 139 --EWLENIIKNPILSDLIGG 156
+ LEN +K LIGG
Sbjct: 250 NYQELENSLKLIAYQRLIGG 269
>gi|22536347|ref|NP_687198.1| competence protein CglA [Streptococcus agalactiae 2603V/R]
gi|76787380|ref|YP_328894.1| competence protein ComGA [Streptococcus agalactiae A909]
gi|76798818|ref|ZP_00781030.1| competence protein CglA [Streptococcus agalactiae 18RS21]
gi|77410958|ref|ZP_00787314.1| competence protein CglA [Streptococcus agalactiae CJB111]
gi|406708696|ref|YP_006763422.1| competence protein CglA [Streptococcus agalactiae GD201008-001]
gi|424050183|ref|ZP_17787731.1| competence protein ComGA [Streptococcus agalactiae ZQ0910]
gi|22533172|gb|AAM99070.1|AE014199_6 competence protein CglA [Streptococcus agalactiae 2603V/R]
gi|76562437|gb|ABA45021.1| competence protein ComGA [Streptococcus agalactiae A909]
gi|76585825|gb|EAO62371.1| competence protein CglA [Streptococcus agalactiae 18RS21]
gi|77163013|gb|EAO73968.1| competence protein CglA [Streptococcus agalactiae CJB111]
gi|389648258|gb|EIM69768.1| competence protein ComGA [Streptococcus agalactiae ZQ0910]
gi|406649581|gb|AFS44982.1| competence protein CglA [Streptococcus agalactiae GD201008-001]
Length = 323
Score = 37.7 bits (86), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 31/140 (22%)
Query: 36 GVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP-SLQH 93
G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E + +
Sbjct: 142 GSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNEDIGMTY 189
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------------- 138
+I+ H P+++I+ EI +A A A + GVM+ T H
Sbjct: 190 DALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSIPGVYDRLIELGV 249
Query: 139 --EWLENIIKNPILSDLIGG 156
+ LEN +K LIGG
Sbjct: 250 NYQELENSLKLIAYQRLIGG 269
>gi|339302445|ref|ZP_08651497.1| competence protein ComGA [Streptococcus agalactiae ATCC 13813]
gi|417004282|ref|ZP_11943015.1| competence protein ComGA [Streptococcus agalactiae FSL S3-026]
gi|319744114|gb|EFV96488.1| competence protein ComGA [Streptococcus agalactiae ATCC 13813]
gi|341578081|gb|EGS28478.1| competence protein ComGA [Streptococcus agalactiae FSL S3-026]
Length = 323
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 31/140 (22%)
Query: 36 GVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP-SLQH 93
G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E + +
Sbjct: 142 GSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNEDIGMTY 189
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------------- 138
+I+ H P+++I+ EI +A A A + GVM+ T H
Sbjct: 190 DALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSIPGVYDRLIELGV 249
Query: 139 --EWLENIIKNPILSDLIGG 156
+ LEN +K LIGG
Sbjct: 250 NYQELENSLKLIAYQRLIGG 269
>gi|410593867|ref|YP_006950594.1| Type II/IV secretion system protein [Streptococcus agalactiae
SA20-06]
gi|410517506|gb|AFV71650.1| Type II/IV secretion system protein [Streptococcus agalactiae
SA20-06]
Length = 323
Score = 37.7 bits (86), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 31/140 (22%)
Query: 36 GVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP-SLQH 93
G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E + +
Sbjct: 142 GSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNEDIGMTY 189
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------------- 138
+I+ H P+++I+ EI +A A A + GVM+ T H
Sbjct: 190 DALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSIPGVYDRLIELGV 249
Query: 139 --EWLENIIKNPILSDLIGG 156
+ LEN +K LIGG
Sbjct: 250 NYQELENSLKLIAYQRLIGG 269
>gi|398342474|ref|ZP_10527177.1| DNA repair protein RadA [Leptospira inadai serovar Lyme str. 10]
Length = 455
Score = 37.7 bits (86), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 16/88 (18%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT-ARRMQVPEPS--L 91
PGVGK+T++ EI+R LS++ +K + I G+ S +G A RM V P+ L
Sbjct: 99 PGVGKSTLILEISRKLSEQGRKLLYI---------SGEESASQVGLRAARMSVLSPNLLL 149
Query: 92 QHKVMIEAV----ENHMPEVIIVDEIGT 115
+ +E V E+ P+++ VD I T
Sbjct: 150 SSETYVENVSAMIEDTEPDLVFVDSIQT 177
>gi|20089325|ref|NP_615400.1| CobW protein [Methanosarcina acetivorans C2A]
gi|19914214|gb|AAM03880.1| CobW protein [Methanosarcina acetivorans C2A]
Length = 354
Score = 37.7 bits (86), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD 72
G GKTT +++I+R LSD ++ +IV+ EIG DGD
Sbjct: 11 GSGKTTAIQKISRQLSDAGKRIAIIVNEIGEIGLDGD 47
>gi|300813117|ref|ZP_07093495.1| type II/IV secretion system protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
gi|300495958|gb|EFK31102.1| type II/IV secretion system protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
Length = 323
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 58/143 (40%), Gaps = 23/143 (16%)
Query: 10 LIVKFFYALYSINKIIFDFF-----LSYFR--------PGVGKTTVMREIARVLSDEFQK 56
L+++ YAL D F L + R G GKTT M E+AR LS K
Sbjct: 102 LVIRIIYALGESRYFFPDQFGDLVDLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TK 159
Query: 57 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 116
V+ ++ E+ + A + + +++A H P+ +I+ EI E
Sbjct: 160 MVMTIEDPVEVYEESFFQAQVNAGA--------GISYASLLKAALRHRPDALIIGEIRDE 211
Query: 117 AEAHACRSIAERGVMLIGTAHGE 139
AH A G +++ T H +
Sbjct: 212 ETAHLAVDAALSGHLVLATVHAK 234
>gi|441506895|ref|ZP_20988823.1| two-component histidine kinase KdpD [Gordonia aichiensis NBRC
108223]
gi|441448960|dbj|GAC46784.1| two-component histidine kinase KdpD [Gordonia aichiensis NBRC
108223]
Length = 840
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 37/144 (25%), Positives = 66/144 (45%), Gaps = 12/144 (8%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKT M AR L+DE V+ V S+ + RR +V ++ +
Sbjct: 19 PGVGKTYEMLSQARGLADEGVDVVIAVVESHGRSATAALTDGLEEIPRREEVYRGAVLEE 78
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRS---------IAERGVMLIGTAHGEWLENII 145
+ ++AV P V +VDE+ A R+ + + G+ ++ T + + LE++
Sbjct: 79 MDLDAVLARAPRVALVDELA-HTNAPGSRNAKRWQDIEELRDAGIDVLTTVNVQHLESL- 136
Query: 146 KNPILSDLIGGVDTVTLGDEEARA 169
N +++ + G + T+ D RA
Sbjct: 137 -NDVVAQITGVIQRETVPDAVVRA 159
>gi|336396013|ref|ZP_08577412.1| competence protein [Lactobacillus farciminis KCTC 3681]
Length = 322
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS-LQHK 94
G GKT++M + R LS ++KRV+ ++ EI D + ++QV E + + ++
Sbjct: 142 GSGKTSLMYALTRQLS--YKKRVMCIEDPIEIVEDSFL---------QLQVNEEAGMTYE 190
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+I+ H P ++I+ EI A A G ++ T HG+ ++I+
Sbjct: 191 ELIKTTLRHRPGILIIGEIRDAKTAQQAIRAAICGYTVMSTIHGKSKYSVIQ 242
>gi|407408480|gb|EKF31906.1| hypothetical protein MOQ_004254 [Trypanosoma cruzi marinkellei]
Length = 635
Score = 37.4 bits (85), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 70/159 (44%), Gaps = 17/159 (10%)
Query: 20 SINKIIFDFFLSYFRPGVGKTTVM------REIARVLSDEFQKRVVIVDTSNEIGGDGDI 73
+++ ++F +Y PG +T ++ E AR + DE +++ + E+G +G +
Sbjct: 482 AMSDLMFLTQRTYLPPGTLRTQLIYPAVEGEEQARRMPDE-----MLLQLAAEVGLNGVV 536
Query: 74 PHSAIGTARR--MQVPEPSLQHKVMIEAVENHMPEVIIVDE----IGTEAEAHACRSIAE 127
A + +V + ++ I H P + +DE I + E +
Sbjct: 537 EREGGLDAEKEWGEVFSGGERQRISIVRAMCHCPTFVFLDECTSAISQDVEPELYELLQR 596
Query: 128 RGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEE 166
RGV LI +H E L+ + ++ D +GG + LGD +
Sbjct: 597 RGVTLITVSHREALKALHHETLILDGMGGYNMSVLGDSQ 635
>gi|222055748|ref|YP_002538110.1| twitching motility protein [Geobacter daltonii FRC-32]
gi|221565037|gb|ACM21009.1| twitching motility protein [Geobacter daltonii FRC-32]
Length = 356
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 51/118 (43%), Gaps = 33/118 (27%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVD-------TSN-------EIGGDGDIPHSAIGTA 81
G GK+T + + R L++ F ++ ++ TS E+G D D +SA+ +A
Sbjct: 136 GNGKSTTLASMLRFLNENFNHNIITIEDPIEFLFTSQKSCIIQREVGIDTDSFNSALKSA 195
Query: 82 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 139
RM P+VI+V E+ + AC AE G +++ T H +
Sbjct: 196 LRMD-------------------PDVIMVGEMRDKETIDACIKTAETGHLVLSTLHTQ 234
>gi|421858333|ref|ZP_16290604.1| uncharacterized protein PPOP_0382 [Paenibacillus popilliae ATCC
14706]
gi|410832091|dbj|GAC41041.1| uncharacterized protein PPOP_0382 [Paenibacillus popilliae ATCC
14706]
Length = 187
Score = 37.4 bits (85), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 114 GTEAEAHACRSIA-ERGVMLIGTAHGEWLENIIKNPILSDLIGGV--DTVTLGDEEARAR 170
G + E H C S A E+G + GTA+G + N++ + DL GG + G ++ +A
Sbjct: 21 GQKTEFHICESCAREKGEWIPGTANGFSIHNLLSGLLDFDLSGGAAKGSGACGSQKPQAM 80
Query: 171 RCQKSIL 177
RC+K L
Sbjct: 81 RCEKCGL 87
>gi|357636533|ref|ZP_09134408.1| type II/IV secretion system protein [Streptococcus macacae NCTC
11558]
gi|357584987|gb|EHJ52190.1| type II/IV secretion system protein [Streptococcus macacae NCTC
11558]
Length = 313
Score = 37.4 bits (85), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 64/157 (40%), Gaps = 29/157 (18%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP-SLQHK 94
G GKTT+M +IAR F K+++ ++ EI ++Q+ E + +
Sbjct: 142 GSGKTTLMYQIAR--EKFFNKQIITIEDPVEI---------KEANMLQLQLNENIGMTYD 190
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW-------------- 140
+I+ H P+++I+ EI A A + GV+++ T H +
Sbjct: 191 SLIKLSLRHRPDILIIGEIRDRETARAVIRASLTGVLVMSTVHAKSIPGVYARLLELGVN 250
Query: 141 ---LENIIKNPILSDLIGGVDTVTLGDEEARARRCQK 174
LEN + I LI G + ++ + QK
Sbjct: 251 PKELENTLGGIIYQRLISGGGVLDFAKDKFQEHSAQK 287
>gi|322389128|ref|ZP_08062691.1| UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
[Streptococcus parasanguinis ATCC 903]
gi|321144170|gb|EFX39585.1| UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
[Streptococcus parasanguinis ATCC 903]
Length = 504
Score = 37.4 bits (85), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 31/185 (16%)
Query: 38 GKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMI 97
GKTT +A++LS + + +NEIG +P++ + +PE + K+++
Sbjct: 158 GKTTTKDMLAQLLSTTYLTYKTQGNYNNEIG----LPYTV------LHMPEGT--DKLVL 205
Query: 98 EAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN---IIKNPI-LSDL 153
E ++H+ ++ ++ E+ AH +I V LIG AH E+ ++ I K + ++D
Sbjct: 206 EMGQDHLGDIHLLSEL-----AHPKAAI----VTLIGEAHLEFFKDRSEIAKGKLQIADG 256
Query: 154 I--GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT---EKSVDM 208
+ GG+ V D A +K + R P F+ E+ ER +T + E+++D+
Sbjct: 257 MPEGGL-LVVPADPIVDAYLPEKQTVVRFGPDEEIFITELIERKDSLTFRANFLEEAIDL 315
Query: 209 LLRGK 213
+ GK
Sbjct: 316 PVTGK 320
>gi|350270772|ref|YP_004882080.1| stage III sporulation protein AA [Oscillibacter valericigenes
Sjm18-20]
gi|348595614|dbj|BAK99574.1| stage III sporulation protein AA [Oscillibacter valericigenes
Sjm18-20]
Length = 301
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 59/141 (41%), Gaps = 12/141 (8%)
Query: 18 LYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIG----GDGDI 73
L S +I LS PG GKTT++R++ R +S RV + D E+ G
Sbjct: 143 LLSGGEINSTLLLSP--PGGGKTTLLRDLIRCVSQR-GFRVGLADERGEVAVCYRGK--- 196
Query: 74 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 133
P +G + P M+ N P+++ DEI E + A A GV L+
Sbjct: 197 PQMDVGPCTDVLDGCPKAIAIPMLLRTMN--PQIVAADEITAEEDIRAMTMAAGCGVKLL 254
Query: 134 GTAHGEWLENIIKNPILSDLI 154
T H + + P+ + L+
Sbjct: 255 ATVHAANAAELTQKPLYARLL 275
>gi|77407934|ref|ZP_00784685.1| competence protein CglA [Streptococcus agalactiae COH1]
gi|77173481|gb|EAO76599.1| competence protein CglA [Streptococcus agalactiae COH1]
Length = 199
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 14/111 (12%)
Query: 36 GVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP-SLQH 93
G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E + +
Sbjct: 18 GSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNEDIGMTY 65
Query: 94 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 144
+I+ H P+++I+ EI +A A A + GVM+ T H + + +
Sbjct: 66 DALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAKSIPGV 116
>gi|325680699|ref|ZP_08160237.1| putative stage III sporulation protein AA [Ruminococcus albus 8]
gi|324107479|gb|EGC01757.1| putative stage III sporulation protein AA [Ruminococcus albus 8]
Length = 294
Score = 37.4 bits (85), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 58/132 (43%), Gaps = 17/132 (12%)
Query: 30 LSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ---- 85
L + P GKTT++R++ R+ + R ++D E+ +A+ R M
Sbjct: 143 LIFGAPSSGKTTILRDLTRMCGMVY--RTTLIDERGEL--------AAVYLGRPMNDVGL 192
Query: 86 ---VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 142
V + + + AV P++I+ DEIG+ + + + GV L+ + H + E
Sbjct: 193 LTDVFDKYPRKNAIETAVRVMSPQIIVCDEIGSSEDVLSLTYALDSGVKLVCSCHCDSFE 252
Query: 143 NIIKNPILSDLI 154
+ + +L+
Sbjct: 253 ELNSKANICELL 264
>gi|377559855|ref|ZP_09789389.1| turgor pressure sensor kinase KdpD [Gordonia otitidis NBRC 100426]
gi|377522979|dbj|GAB34554.1| turgor pressure sensor kinase KdpD [Gordonia otitidis NBRC 100426]
Length = 839
Score = 37.4 bits (85), Expect = 6.1, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 10/143 (6%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PGVGKT M AR L+DE V+ V S+ + RR +V ++ +
Sbjct: 19 PGVGKTYEMLSHARGLADEGVDVVIAVVESHGRSATAALTEGLEEIPRRDEVYRGAVLEE 78
Query: 95 VMIEAVENHMPEVIIVDEIG-TEA----EAHACRSIAE---RGVMLIGTAHGEWLENIIK 146
+ ++AV P V +VDE+ T A A + I E G+ ++ T + + LE++
Sbjct: 79 MDLDAVLARAPRVALVDELAHTNAPGSRNAKRWQDIEELRNAGIDVLTTVNVQHLESL-- 136
Query: 147 NPILSDLIGGVDTVTLGDEEARA 169
N +++ + G + T+ D RA
Sbjct: 137 NDVVAQITGVIQRETVPDAVVRA 159
>gi|423335885|ref|ZP_17313636.1| competence protein [Lactobacillus reuteri ATCC 53608]
gi|337729088|emb|CCC04211.1| competence protein [Lactobacillus reuteri ATCC 53608]
Length = 323
Score = 37.0 bits (84), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 39/173 (22%)
Query: 10 LIVKFFYALYSINKIIFDFF-------LSYFRP-----------GVGKTTVMREIARVLS 51
L+++F Y L N I F+F L +R G GKTT M ++AR L
Sbjct: 100 LVIRFIYPL---NDIRFNFLVPHQWERLQQYRQQRGLILFAGPMGAGKTTTMYQLARQL- 155
Query: 52 DEFQKRVVI-VDTSNEIGGDGDIPHSAIGTARRMQVPE-PSLQHKVMIEAVENHMPEVII 109
K++V+ ++ EI G I ++QV E + ++ +++ H P+V I
Sbjct: 156 --LPKQIVLTIEDPVEIDHPGFI---------QLQVNELAGMNYESLLKLGLRHRPDVFI 204
Query: 110 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL 162
+ EI A A G +++GT H +I L L G+D+ L
Sbjct: 205 IGEIRDSQTAAMSVQAALSGHLVLGTIHARNAYGVISR--LQQL--GIDSYYL 253
>gi|440300459|gb|ELP92928.1| werner helicase interacting protein, putative [Entamoeba invadens
IP1]
Length = 545
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 101/241 (41%), Gaps = 40/241 (16%)
Query: 15 FYALYSINKIIFDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIP 74
FYA+ + N+I Y G GKTT+ + IAR ++F V + TS DI
Sbjct: 57 FYAMIANNQISSTII--YGPAGCGKTTIAKIIARTTKNDF---VTVSATSTGKNELKDII 111
Query: 75 HSA-----IGTARRMQVPE----PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 125
+A +GT + V E LQ + AVEN +I++ ++
Sbjct: 112 KTATQKKKMGTNTILFVDEIHSLNKLQQDTFLPAVENG--NIILLGATTENPSFEINDAL 169
Query: 126 AER-GVMLIGTAHGEWLENIIKNPI----------LSD-LIGGVDTVTLGDEEARARRCQ 173
R G++++ E L I+KN I LSD + + +V GD +
Sbjct: 170 MSRCGLLVLRRLRDEDLMTIMKNAIEKEYKGCMFELSDEVFQYIASVADGDGRNALNFVE 229
Query: 174 KSILERKAPPTFY--FLIEMRERHYWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVD 231
K L +Y F I+ E+ + KTEK+ + +G +V RD+ +VVV+
Sbjct: 230 KVYL-------YYTKFNIDQLEKIVLASKKTEKTATTVEKGCRDVV---NRDNEKSVVVE 279
Query: 232 R 232
R
Sbjct: 280 R 280
>gi|312867216|ref|ZP_07727426.1| UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
[Streptococcus parasanguinis F0405]
gi|311097345|gb|EFQ55579.1| UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
[Streptococcus parasanguinis F0405]
Length = 456
Score = 37.0 bits (84), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 91/185 (49%), Gaps = 31/185 (16%)
Query: 38 GKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMI 97
GKTT +A++LS + + +NEIG +P++ + +PE + K+++
Sbjct: 110 GKTTTKDMLAQLLSTTYLTYKTQGNYNNEIG----LPYTV------LHMPEGT--DKLVL 157
Query: 98 EAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN---IIKNPI-LSDL 153
E ++H+ ++ ++ E+ AH +I V LIG AH E+ ++ I K + ++D
Sbjct: 158 EMGQDHLGDIHLLSEL-----AHPKAAI----VTLIGEAHLEFFKDRSEIAKGKLQIADG 208
Query: 154 I--GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT---EKSVDM 208
+ GG+ V D A +K + R P F+ E+ ER +T + E+++D+
Sbjct: 209 MPEGGL-LVVPADPIVNAYLPEKQKVVRFGPDEEIFITELIERKDSLTFRANFLEEAIDL 267
Query: 209 LLRGK 213
+ GK
Sbjct: 268 PVTGK 272
>gi|312870429|ref|ZP_07730550.1| type II/IV secretion system protein [Lactobacillus oris PB013-T2-3]
gi|311094046|gb|EFQ52369.1| type II/IV secretion system protein [Lactobacillus oris PB013-T2-3]
Length = 325
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE-PSLQHK 94
G GKTT M ++AR ++D Q+ V+ ++ EI D P + ++QV E + ++
Sbjct: 141 GSGKTTTMYQLARQVAD--QQVVMAIEDPVEI----DEP-----SFVQLQVNELAGMNYQ 189
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 139
++ H P+V I+ EI A A G +++GT H +
Sbjct: 190 QLLRLGLRHRPDVFIIGEIRDPETAQMTVQAALSGHLVLGTVHAQ 234
>gi|323339504|ref|ZP_08079782.1| competence protein ComGA [Lactobacillus ruminis ATCC 25644]
gi|417972857|ref|ZP_12613743.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 25644]
gi|323093073|gb|EFZ35667.1| competence protein ComGA [Lactobacillus ruminis ATCC 25644]
gi|346330774|gb|EGX99007.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 25644]
Length = 328
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP---EPSLQ 92
G GKTT M E+AR ++D K+++ ++ EI R +QV + +
Sbjct: 143 GSGKTTTMYELARKMTD---KQIMCIEDPVEIA-----------EPRFLQVQVNEKAKMS 188
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
+ +++ H P+V I+ EI E A + A G +++ T H
Sbjct: 189 YYDLLKVALRHHPDVFIIGEIRDELTAKTAVNAALSGHLVLSTVHA 234
>gi|335997578|ref|ZP_08563492.1| competence protein ComGA [Lactobacillus ruminis SPM0211]
gi|335350261|gb|EGM51758.1| competence protein ComGA [Lactobacillus ruminis SPM0211]
Length = 328
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 13/104 (12%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS-LQHK 94
G GKTT M E+AR ++D K+++ ++ EI A ++QV E + + +
Sbjct: 143 GSGKTTTMYELARKMTD---KQIMCIEDPVEI---------AEPRFLQVQVNEKAKMSYY 190
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
+++ H P+V I+ EI E A + A G +++ T H
Sbjct: 191 DLLKVALRHHPDVFIIGEIRDELTAKTAVNAALSGHLVLSTVHA 234
>gi|58337049|ref|YP_193634.1| competence protein [Lactobacillus acidophilus NCFM]
gi|227903612|ref|ZP_04021417.1| competence protein [Lactobacillus acidophilus ATCC 4796]
gi|58254366|gb|AAV42603.1| competence protein [Lactobacillus acidophilus NCFM]
gi|227868499|gb|EEJ75920.1| competence protein [Lactobacillus acidophilus ATCC 4796]
Length = 324
Score = 36.6 bits (83), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 95
G GKTT M EIA+ LS+ + V+ ++ E+ + S + E + ++
Sbjct: 142 GSGKTTTMYEIAKKLSE--NRIVMTIEDPVEVY-ESSFLQSQVNN-------EAGIDYQS 191
Query: 96 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 139
+++A H P+++I+ EI + A A G +++ T H +
Sbjct: 192 LLKAALRHRPDILIIGEIRDQGTARLSVDAALSGHLVLATVHAK 235
>gi|259502892|ref|ZP_05745794.1| competence protein CglA [Lactobacillus antri DSM 16041]
gi|259169143|gb|EEW53638.1| competence protein CglA [Lactobacillus antri DSM 16041]
Length = 325
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE-PSLQHK 94
G GKTT M ++AR ++D Q+ V+ ++ EI D P + ++QV E + ++
Sbjct: 141 GSGKTTTMYQLARQVAD--QRVVMAIEDPVEI----DEP-----SFVQLQVNELAGMNYQ 189
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 139
++ H P+V I+ EI A A G +++GT H +
Sbjct: 190 QLLRLGLRHRPDVFIIGEIRDPETAQMTVRAALSGQLVLGTVHAQ 234
>gi|347525904|ref|YP_004832652.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 27782]
gi|345284863|gb|AEN78716.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 27782]
Length = 328
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP---EPSLQ 92
G GKTT M E+AR ++D K+++ ++ EI R +QV + +
Sbjct: 143 GSGKTTTMYELARKMTD---KQIMCIEDPVEIA-----------EPRFLQVQVNEKAKMS 188
Query: 93 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
+ +++ H P+V I+ EI E A + A G +++ T H
Sbjct: 189 YYDLLKVALRHHPDVFIIGEIRDELTAKTAVNAALSGHLVLSTVHA 234
>gi|18313110|ref|NP_559777.1| conjugal transfer protein [Pyrobaculum aerophilum str. IM2]
gi|18160619|gb|AAL63959.1| conjugal transfer protein, conjectural [Pyrobaculum aerophilum str.
IM2]
Length = 343
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 52/112 (46%), Gaps = 12/112 (10%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 94
PG GKTT++ I ++ + Q+ V +D ++E D D I +++ SL
Sbjct: 209 PGSGKTTLLSVIDDLIPGQLQR--VYIDEADEFDDDPDKNQIKIRNVNKLREVYASLNRN 266
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 146
+ ++II+ E+ E +A ++ E G+ + T H +++ +K
Sbjct: 267 I----------DIIIIGELQYEEHFNAFKTAVEIGLQTLATMHATSVKDALK 308
>gi|171778651|ref|ZP_02919747.1| hypothetical protein STRINF_00599 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|379704898|ref|YP_005203357.1| UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
[Streptococcus infantarius subsp. infantarius CJ18]
gi|171282608|gb|EDT48032.1| UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase
[Streptococcus infantarius subsp. infantarius ATCC
BAA-102]
gi|374681597|gb|AEZ61886.1| UDP-N-acetylmuramoylalanyl-D-glutamyl-2,
6-diaminopimelate-D-alanyl-D-alanine ligase
[Streptococcus infantarius subsp. infantarius CJ18]
Length = 454
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 61/125 (48%), Gaps = 26/125 (20%)
Query: 38 GKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMI 97
GKTT IA VLS E++ + +NEIG +P++A+ P K+++
Sbjct: 110 GKTTTKDMIAAVLSTEYKTYKTQGNYNNEIG----LPYTALHM--------PDDTEKIVL 157
Query: 98 EAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL---ENIIKNPILSDLI 154
E ++HM ++ ++ E+ A+ H V LIG AH E+ E I K + ++
Sbjct: 158 EMGQDHMGDIHLLSEL---AKPHIGV------VTLIGEAHLEFFGSREKIAKGKL--QIV 206
Query: 155 GGVDT 159
G+D+
Sbjct: 207 DGMDS 211
>gi|205374026|ref|ZP_03226826.1| required for exogenous DNA-binding (competence) [Bacillus
coahuilensis m4-4]
Length = 357
Score = 36.6 bits (83), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 13/113 (11%)
Query: 29 FLSYFRP-GVGKTTVMREIARVLSDEFQKRVVIV-DTSNEIGGDGDIPHSAIGTARRMQV 86
L Y P G GKTT++ + + SD+ + V+ + D +I D ++QV
Sbjct: 139 LLLYSGPTGSGKTTLLYTLVQYCSDQLHRHVITLEDPIEKINED----------FLQIQV 188
Query: 87 PE-PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 138
E + + ++A+ H P+VI+V EI E AH A G +++ T H
Sbjct: 189 NERAGMTYSNGLKAILRHDPDVIMVGEIRDEETAHIAVRAALSGHLVLSTIHS 241
>gi|408790759|ref|ZP_11202372.1| DNA repair protein RadA [Lactobacillus florum 2F]
gi|408519948|gb|EKK20061.1| DNA repair protein RadA [Lactobacillus florum 2F]
Length = 460
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 58/110 (52%), Gaps = 25/110 (22%)
Query: 35 PGVGKTTVMREIARVLSDEFQKRVVIV---DTSNEIGGDGDIPHSAIGTARRMQVPE--- 88
PG+GK+T++ +++ LS + QKRV+ V ++++++ D R+Q+P+
Sbjct: 101 PGIGKSTLLLQVSGELS-QLQKRVLYVTGEESADQVKMRAD----------RLQIPQNED 149
Query: 89 ----PSLQHKVMIEAVENHMPEVIIVDEIGTEAEA---HACRSIAE-RGV 130
P + +A+ + P V+IVD + T E+ A S+A+ RGV
Sbjct: 150 LYVFPETDMTAIRDAIADLKPNVVIVDSVQTMQESTVTSAIGSVAQVRGV 199
>gi|295100821|emb|CBK98366.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
prausnitzii L2-6]
Length = 293
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 7/123 (5%)
Query: 26 FDFFLSYFRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 85
F L P GKTT++R +AR L+ + + V ++D EI P S A +
Sbjct: 146 FIGMLLMGEPDSGKTTLLRGVARELAKQ-NRAVAVIDERREI-----FP-SEESAALPLD 198
Query: 86 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 145
+ + + + A+ P+VI++DE+G E +A GV I T H E
Sbjct: 199 ILSGIPKGQAVQMALRTLSPQVILLDELGGMDELYALEQGLFSGVEFIATLHAASWEEAA 258
Query: 146 KNP 148
+ P
Sbjct: 259 RRP 261
>gi|161507246|ref|YP_001577200.1| competence protein [Lactobacillus helveticus DPC 4571]
gi|260102545|ref|ZP_05752782.1| competence protein [Lactobacillus helveticus DSM 20075]
gi|417020872|ref|ZP_11947366.1| competence protein [Lactobacillus helveticus MTCC 5463]
gi|160348235|gb|ABX26909.1| Competence protein [Lactobacillus helveticus DPC 4571]
gi|260083639|gb|EEW67759.1| competence protein [Lactobacillus helveticus DSM 20075]
gi|328461763|gb|EGF33999.1| competence protein [Lactobacillus helveticus MTCC 5463]
Length = 324
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 18/130 (13%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 95
G GKTT M EIA+ LS K V+ ++ E+ + S + + + ++
Sbjct: 142 GSGKTTTMYEIAKKLSP--NKVVMTIEDPVEVH-EPKFLQSQVNN-------KAGIDYQS 191
Query: 96 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW-------LENI-IKN 147
+++A H P+++I+ EI + A A G ++ TAH + LE++ IKN
Sbjct: 192 LLKAALRHRPDILIIGEIRDQGTARLAIDAALSGHLVFATAHAKSTLQTISRLESLGIKN 251
Query: 148 PILSDLIGGV 157
LS+ + V
Sbjct: 252 DELSNCLTAV 261
>gi|417885137|ref|ZP_12529295.1| type II/IV secretion system protein [Lactobacillus oris F0423]
gi|341596332|gb|EGS38943.1| type II/IV secretion system protein [Lactobacillus oris F0423]
Length = 325
Score = 36.6 bits (83), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE-PSLQHK 94
G GKTT M ++AR ++D Q+ V+ ++ EI D P + ++QV E + ++
Sbjct: 141 GSGKTTTMYQLARQVAD--QQVVMAIEDPVEI----DEP-----SFVQLQVNELAGMNYQ 189
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 139
++ H P+V I+ EI A A G +++GT H +
Sbjct: 190 QLLRLGLRHRPDVFIIGEIRDPETAQMTIQAALSGHLVLGTVHAQ 234
>gi|365157848|ref|ZP_09354093.1| hypothetical protein HMPREF1015_00253 [Bacillus smithii 7_3_47FAA]
gi|363622518|gb|EHL73677.1| hypothetical protein HMPREF1015_00253 [Bacillus smithii 7_3_47FAA]
Length = 359
Score = 36.6 bits (83), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 36 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS-LQHK 94
G GKTT + + + F ++V+ ++ E DG + ++QV E + L +
Sbjct: 147 GSGKTTTLYSLVSHSTRHFNQKVITLEDPVERQNDGWL---------QLQVNEKAGLTYS 197
Query: 95 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 137
++A+ H P+++IV EI E A A G +++ T H
Sbjct: 198 AGLKAILRHDPDIVIVGEIRDEETARITMRAALTGHLVLTTMH 240
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.140 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,725,613,603
Number of Sequences: 23463169
Number of extensions: 146407313
Number of successful extensions: 597751
Number of sequences better than 100.0: 779
Number of HSP's better than 100.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 175
Number of HSP's that attempted gapping in prelim test: 596511
Number of HSP's gapped (non-prelim): 794
length of query: 241
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 103
effective length of database: 9,121,278,045
effective search space: 939491638635
effective search space used: 939491638635
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 75 (33.5 bits)