Your job contains 1 sequence.
>026212
MGSESSASLDEEVNVMVVDASVDGHCPTKKNKSRVPKRVHKAEREKLKREHLNDLFLDLA
NAVEVNQPNNGKACVLNEAARLLKDLFSQIESLNKENASLLSESHYVTIEKNELKEENSS
LESQIEVLQSELRARVVQSKPDLNIPPEFQQPELSSHFPGDSYGFPAAVEPTLSQAPAVL
VVPIHSDLQAYSASDVAQLTSKPASNVSKPHARYPNPADSWPSQLLGENISSTRENADRN
K
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026212
(241 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2079102 - symbol:PYE "AT3G47640" species:3702 ... 447 3.2e-42 1
UNIPROTKB|Q69V10 - symbol:P0506F02.119 "cDNA clone:J02306... 312 6.4e-28 1
UNIPROTKB|Q2R1K8 - symbol:Os11g0601700 "Helix-loop-helix ... 264 7.8e-23 1
UNIPROTKB|Q67U21 - symbol:OSJNBa0065F08.2 "Basic helix-lo... 202 6.0e-16 1
TAIR|locus:2135169 - symbol:bHLH11 "AT4G36060" species:37... 161 1.0e-10 1
TAIR|locus:2092216 - symbol:bHLH121 "AT3G19860" species:3... 159 4.2e-10 1
TAIR|locus:2086198 - symbol:bHLH34 "AT3G23210" species:37... 141 1.1e-07 1
UNIPROTKB|Q6ZGM4 - symbol:OJ1442_E05.19 "cDNA clone:006-3... 126 3.6e-06 1
TAIR|locus:2157538 - symbol:ILR3 "AT5G54680" species:3702... 121 1.4e-05 1
TAIR|locus:2129710 - symbol:bHLH104 "AT4G14410" species:3... 122 1.9e-05 1
UNIPROTKB|Q6ZKI8 - symbol:OJ1119_D01.9 "BHLH transcriptio... 112 0.00023 1
>TAIR|locus:2079102 [details] [associations]
symbol:PYE "AT3G47640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010106 "cellular response to iron ion starvation"
evidence=IMP] [GO:0055072 "iron ion homeostasis" evidence=IMP]
InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0055072
EMBL:AY080786 EMBL:AY114018 EMBL:AL132955 EMBL:AF488582
IPI:IPI00539041 PIR:T45724 RefSeq:NP_001190029.1
RefSeq:NP_001190030.1 RefSeq:NP_190348.1 UniGene:At.43911
ProteinModelPortal:Q9SN74 SMR:Q9SN74 IntAct:Q9SN74 STRING:Q9SN74
PRIDE:Q9SN74 EnsemblPlants:AT3G47640.1 EnsemblPlants:AT3G47640.2
EnsemblPlants:AT3G47640.3 GeneID:823918 KEGG:ath:AT3G47640
TAIR:At3g47640 eggNOG:NOG254857 HOGENOM:HOG000070871
InParanoid:Q9SN74 OMA:QSKPDLN PhylomeDB:Q9SN74
ProtClustDB:CLSN2913351 Genevestigator:Q9SN74 GO:GO:0010106
Uniprot:Q9SN74
Length = 240
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 113/250 (45%), Positives = 148/250 (59%)
Query: 1 MGSESSASLDEEVNVMVVDASVDGHCPTKKNKSRVPKRVHKAEREKLKREHLNDLFLDLA 60
M S++ ++ +E N A+ D C K +VPKR++KA RE+LKREHLN+LF++LA
Sbjct: 1 MVSKTPSTSSDEAN-----ATADERC----RKGKVPKRINKAVRERLKREHLNELFIELA 51
Query: 61 NAVEVNQPNNGKACVLNEAARLLKDLFSQIESLNKENASLLSESHYVTIXXXXXXXXXXX 120
+ +E+NQ N+GKA +L EA R LKD+F QIESL KE+ASLLSES YVT
Sbjct: 52 DTLELNQQNSGKASILCEATRFLKDVFGQIESLRKEHASLLSESSYVTTEKNELKEETSV 111
Query: 121 XXXQIEVLQSELRARVVQSKPDLNI-P-PEF-------QQPELSSHFPG----DSYGFPA 167
+I LQ+E+ AR QSKPDLN P PE+ Q PE S FPG GF
Sbjct: 112 LETEISKLQNEIEARANQSKPDLNTSPAPEYHHHHYQQQHPERVSQFPGLPIFQGPGFQQ 171
Query: 168 AVEPTLSQAPAVLVVPIHSDLQAYSASDVAQLTSKP----ASNVSKPHARYPNPADSWPS 223
+ TL VLV+PI D Q S++ Q +P +SNVSKP RY + ADSW S
Sbjct: 172 SAT-TLHPPATVLVLPIQPDPQTQDISEMTQ-AQQPLMFNSSNVSKPCPRYASAADSWSS 229
Query: 224 QLLGENISST 233
+LLGE + ++
Sbjct: 230 RLLGERLKAS 239
>UNIPROTKB|Q69V10 [details] [associations]
symbol:P0506F02.119 "cDNA clone:J023068N18, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008213
EMBL:CM000144 EMBL:HQ858856 EMBL:AP004260 EMBL:AP004306
EMBL:AK070963 RefSeq:NP_001060350.1 UniGene:Os.34549 STRING:Q69V10
EnsemblPlants:LOC_Os07g43530.1 EnsemblPlants:LOC_Os07g43530.2
GeneID:4343984 KEGG:osa:4343984 eggNOG:NOG310955 OMA:NESHYVA
ProtClustDB:CLSN2693968 Uniprot:Q69V10
Length = 265
Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
Identities = 84/216 (38%), Positives = 116/216 (53%)
Query: 29 KKNKSRVPKRVHKAEREKLKREHLNDLFLDLANAVEVNQPNNGKACVLNEAARLLKDLFS 88
KK + PKR+HK+EREKLKR+ NDLF +L N +E ++ NNGKACVL E R+LKDL S
Sbjct: 28 KKCDKKAPKRIHKSEREKLKRDKQNDLFNELGNLLEPDRQNNGKACVLGETTRILKDLLS 87
Query: 89 QIESLNKENASLLSESHYVTIXXXXXXXXXXXXXXQIEVLQSELRARV--------VQSK 140
Q+ESL KEN+SL +ESHYV + +I LQ+ELR R+ V ++
Sbjct: 88 QVESLRKENSSLKNESHYVALERNELHDDNSMLRTEILELQNELRTRMEGNPVWSHVNTR 147
Query: 141 PDLNIP-PE---FQQPELSSHFP-GDSYGFPAAVEPTLSQAPAVLVVPIHSDLQAYSASD 195
P L +P P F L H P + FP + + Q A P +LQ + S
Sbjct: 148 PALRVPYPTTGVFPVQHLP-HLPVTTTAAFPQQLPVIIEQHYAA--TP--RELQLFPESA 202
Query: 196 VAQLTSKPAS------NVSKPHARYPNPADSWPSQL 225
++ S+P+ +V++P RYP P + P L
Sbjct: 203 TSE-DSEPSQEHGISDHVTRPQPRYPTPTATLPVNL 237
>UNIPROTKB|Q2R1K8 [details] [associations]
symbol:Os11g0601700 "Helix-loop-helix DNA-binding domain
containing protein, expressed" species:39947 "Oryza sativa Japonica
Group" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 EMBL:AP008217 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000148 HOGENOM:HOG000070871 RefSeq:NP_001068228.1
UniGene:Os.27243 EnsemblPlants:LOC_Os11g38870.1 GeneID:4350864
KEGG:osa:4350864 eggNOG:NOG323604 OMA:LVSERQY
ProtClustDB:CLSN2698640 Uniprot:Q2R1K8
Length = 278
Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
Identities = 80/236 (33%), Positives = 123/236 (52%)
Query: 3 SESSASLDEEVNVMVVDASVDGHCPTKKNKSRVPKRVHKAEREKLKREHLNDLFLDLANA 62
+ESS SL N D +VDG K+++ + PK+ HKAEREKLKR+ LNDLF++L++
Sbjct: 15 TESSGSLGGSSNA-ASDKAVDGSLD-KRSQEKAPKKTHKAEREKLKRDQLNDLFVELSSM 72
Query: 63 VEVNQPNNGKACVLNEAARLLKDLFSQIESLNKENASLLSESHYVTIXXXXXXXXXXXXX 122
++ + N+GKA VL +AAR+L+DL SQ+ESL KE ++LL+E YV
Sbjct: 73 LDPERQNSGKATVLGDAARVLRDLVSQVESLRKEQSALLTERQYVGSENNELQEENIMLR 132
Query: 123 XQIEVLQSELRARVVQSKPDL-NIPPEFQQPELSSHFPGDSYGFPAAV---EPTLSQA-P 177
QI L +E+ AR+ + + N+ QP ++ + P + P L+ P
Sbjct: 133 AQILELHNEICARMGNNHLNQSNLA--MSQPVANNGSNSATQPVPHHIWGNGPNLAMVHP 190
Query: 178 AVLVVPIHSDL-QAYSASDV-----AQLTSKPASNVSKPHARYPNPADSWPSQLLG 227
+ P+H+ Q+ AS V +L P ++VS R + S P+ G
Sbjct: 191 TNTLSPLHNQHHQSAGASQVYASRPQELQLFPGTSVSTERERSRAGSGSTPATSSG 246
>UNIPROTKB|Q67U21 [details] [associations]
symbol:OSJNBa0065F08.2 "Basic helix-loop-helix-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008208 EMBL:CM000139 eggNOG:NOG237057
EMBL:HQ858850 EMBL:AP005770 EMBL:AK069790 EMBL:AK103986
RefSeq:NP_001046730.1 UniGene:Os.52897
EnsemblPlants:LOC_Os02g23823.1 GeneID:4329217 KEGG:osa:4329217
OMA:RNDKATI ProtClustDB:CLSN2692698 Uniprot:Q67U21
Length = 343
Score = 202 (76.2 bits), Expect = 6.0e-16, P = 6.0e-16
Identities = 61/222 (27%), Positives = 100/222 (45%)
Query: 20 ASVDGHCPTKKNKSRVPKRVHKAEREKLKREHLNDLFLDLANAVEVNQPNNGKACVLNEA 79
A G K S ++V KA+REK++R+ LN+ F +L + ++ ++P N KA +L++A
Sbjct: 23 ADSSGKTECKTQGSIATRKVQKADREKMRRDRLNEQFQELGSTLDPDRPRNDKATILSDA 82
Query: 80 ARLLKDLFSQIESLNKENASLLSESHYVTIXXXXXXXXXXXXXXQIEVLQSELRARVVQS 139
++LKDL SQ+ L E SL E+ +T +++ L ++ + R+
Sbjct: 83 IQMLKDLTSQVNKLKAEYTSLSEEARELTQEKNELRDEKVSLKFEVDNLNTQYQQRMRVL 142
Query: 140 KPDLNIPPEFQQPELSSHFPGDSYGFPAAVEPTLSQAPAVLVVPIHSDLQAYSASDVAQL 199
P + P + P Y F V P P+ VP+H LQAY
Sbjct: 143 YPWTGMEPSVV---IGPPLP---YPFSVPV-PVPVPIPSG-AVPMHPQLQAYPY--FRNQ 192
Query: 200 TSKPASNVSKPHARYPNPADSWPSQLLGENISSTRENADRNK 241
TS SN P+ Y P P+ L S+ +++ N+
Sbjct: 193 TSGTVSNPCTPYMAYTQPIHP-PTDQLSNQFSAPVQHSSSNR 233
>TAIR|locus:2135169 [details] [associations]
symbol:bHLH11 "AT4G36060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161588
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022373 EMBL:AF251696
EMBL:AY090362 EMBL:BT000535 IPI:IPI00517622 IPI:IPI00521706
PIR:T05498 RefSeq:NP_195330.2 RefSeq:NP_849566.1 UniGene:At.43990
ProteinModelPortal:Q8W2F2 SMR:Q8W2F2 IntAct:Q8W2F2 PRIDE:Q8W2F2
EnsemblPlants:AT4G36060.1 GeneID:829762 KEGG:ath:AT4G36060
TAIR:At4g36060 eggNOG:NOG307055 HOGENOM:HOG000005852 OMA:PYSASVN
PhylomeDB:Q8W2F2 ProtClustDB:CLSN2690363 Genevestigator:Q8W2F2
Uniprot:Q8W2F2
Length = 286
Score = 161 (61.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 46/147 (31%), Positives = 71/147 (48%)
Query: 41 KAEREKLKREHLNDLFLDLANAVEVNQPNNGKACVLNEAARLLKDLFSQIESLNKENASL 100
KAEREKL+R+ L + FL+L NA++ N+P + KA VL + ++LKD+ +Q++ L E +L
Sbjct: 49 KAEREKLRRDKLKEQFLELGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYETL 108
Query: 101 LSESHYVTIXXXXXXXXXXXXXXQIEVLQSELRARVVQSKPDLNIPPEFQQPELSSHFP- 159
ES + IE+L ++ + R+ P + P S H P
Sbjct: 109 SQESRELIQEKSELREEKATLKSDIEILNAQYQHRIKTMVPWV--------PHYSYHIPF 160
Query: 160 -----GDSYGFP--AAVEPTLSQAPAV 179
G S P A+V P Q +V
Sbjct: 161 VAITQGQSSFIPYSASVNPLTEQQASV 187
>TAIR|locus:2092216 [details] [associations]
symbol:bHLH121 "AT3G19860" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0016558 "protein import into
peroxisome matrix" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB025631
HOGENOM:HOG000005852 EMBL:AF488633 EMBL:AY065107 EMBL:AY081703
IPI:IPI00517171 IPI:IPI00657162 RefSeq:NP_001030729.1
RefSeq:NP_188620.1 UniGene:At.20167 ProteinModelPortal:Q9LT23
SMR:Q9LT23 IntAct:Q9LT23 STRING:Q9LT23 EnsemblPlants:AT3G19860.2
GeneID:821523 KEGG:ath:AT3G19860 TAIR:At3g19860 eggNOG:NOG237057
InParanoid:Q9LT23 OMA:GSIPMHP PhylomeDB:Q9LT23
ProtClustDB:CLSN2684712 Genevestigator:Q9LT23 Uniprot:Q9LT23
Length = 337
Score = 159 (61.0 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 46/158 (29%), Positives = 73/158 (46%)
Query: 37 KRVHKAEREKLKREHLNDLFLDLANAVEVNQPNNGKACVLNEAARLLKDLFSQIESLNKE 96
++ KA REKL+RE LN+ F++L N ++ +P N KA +L + +LLK+L S++ L E
Sbjct: 59 RKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKELTSEVNKLKSE 118
Query: 97 NASLLSESHYVTIXXXXXXXXXXXXXXQIEVLQSELRARVVQSKP-----DLNI----PP 147
+L ES +T IE L + + R+ P D + PP
Sbjct: 119 YTALTDESRELTQEKNDLREEKTSLKSDIENLNLQYQQRLRSMSPWGAAMDHTVMMAPPP 178
Query: 148 EFQQPELSSHFPGDSYGFPAAVEPTL--SQAPAVLVVP 183
F P + PG P+ T +Q P+++ P
Sbjct: 179 SFPYPMPIAMPPGSIPMHPSMPSYTYFGNQNPSMIPAP 216
>TAIR|locus:2086198 [details] [associations]
symbol:bHLH34 "AT3G23210" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009718 "anthocyanin-containing compound biosynthetic process"
evidence=RCA] [GO:0009744 "response to sucrose stimulus"
evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB025608 EMBL:AY099674 EMBL:AY128853 EMBL:AF488573
IPI:IPI00543123 RefSeq:NP_188962.2 UniGene:At.6338
ProteinModelPortal:Q9LTC7 SMR:Q9LTC7 EnsemblPlants:AT3G23210.1
GeneID:821899 KEGG:ath:AT3G23210 TAIR:At3g23210 eggNOG:NOG287253
HOGENOM:HOG000238732 InParanoid:Q9LTC7 OMA:NEDNIFQ PhylomeDB:Q9LTC7
ProtClustDB:CLSN2689429 Genevestigator:Q9LTC7 Uniprot:Q9LTC7
Length = 320
Score = 141 (54.7 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 45/174 (25%), Positives = 79/174 (45%)
Query: 9 LDEEVNVMVVDASVDGHCPTKKNKS-RVPKRVHKAEREKLKREHLNDLFLDLANAVEVNQ 67
++ +V V + C K+ ++ K KA REKL+RE LND F+DL++ +E +
Sbjct: 134 INSSSSVGAVKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEPGR 193
Query: 68 -PNNGKACVLNEAARLLKDLFSQIESLNKENASLLSESHYVTIXXXXXXXXXXXXXXQIE 126
P K+ +L++A R++ L + L + N LL E + + E
Sbjct: 194 TPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAEKE 253
Query: 127 VLQSELRARVVQSK---PDLNIPPEFQQPELSSHFPGDSYGFPAAVEPTLSQAP 177
++ +L++ VV S P + P F +++ +P YG+ P S P
Sbjct: 254 KMEQQLKSMVVPSPGFMPSQH-PAAFHSHKMAVAYP---YGYYPPNMPMWSPLP 303
>UNIPROTKB|Q6ZGM4 [details] [associations]
symbol:OJ1442_E05.19 "cDNA clone:006-303-B03, full insert
sequence" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008208 EMBL:CM000139 eggNOG:NOG277469
EMBL:AP004121 EMBL:EU837263 EMBL:HQ858854 EMBL:AK060881
EMBL:AK103434 EMBL:AK104188 RefSeq:NP_001045680.1 UniGene:Os.17893
EnsemblPlants:LOC_Os02g02480.1 EnsemblPlants:LOC_Os02g02480.3
GeneID:4328080 KEGG:osa:4328080 OMA:AIFCDGG Uniprot:Q6ZGM4
Length = 236
Score = 126 (49.4 bits), Expect = 3.6e-06, P = 3.6e-06
Identities = 47/167 (28%), Positives = 73/167 (43%)
Query: 18 VDASVDGHCPTKKNKSRVPKRVHKAEREKLKREHLNDLFLDLANAVEVN-QPNNGKACVL 76
+D SV G ++ S PK KA REK++R+ LND FL+L++ + + Q KA +L
Sbjct: 50 LDQSVLGKRGRDESSSSGPKS--KACREKIRRDRLNDRFLELSSVINPDKQAKLDKANIL 107
Query: 77 NEAARLLKDLFSQIESLNKENASLLSESHYVTIXXXXXXXXXXXXXXQIEVLQSELRARV 136
++AARLL +L + E L + N L + + + E L+ +++A
Sbjct: 108 SDAARLLAELRGEAEKLKESNEKLRETIKDLKVEKNELRDEKVTLKAEKERLEQQVKALS 167
Query: 137 VQSK---PDLNIPPEFQQPELSSHFPG-DSYGFPAAVEPTLSQAPAV 179
V P L P F P + G A P Q A+
Sbjct: 168 VAPTGFVPHLPHPAAFHPAAFPPFIPPYQALGNKNAPTPAAFQGMAM 214
>TAIR|locus:2157538 [details] [associations]
symbol:ILR3 "AT5G54680" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR EMBL:AB022214
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000238732 UniGene:At.49177
UniGene:At.9639 EMBL:AF488629 EMBL:AY054585 EMBL:BT002189
EMBL:AY086197 IPI:IPI00530460 RefSeq:NP_200279.1
ProteinModelPortal:Q9FH37 SMR:Q9FH37 IntAct:Q9FH37 STRING:Q9FH37
EnsemblPlants:AT5G54680.1 GeneID:835557 KEGG:ath:AT5G54680
TAIR:At5g54680 eggNOG:NOG277469 InParanoid:Q9FH37 OMA:MASPEGT
PhylomeDB:Q9FH37 ProtClustDB:CLSN2916456 Genevestigator:Q9FH37
Uniprot:Q9FH37
Length = 234
Score = 121 (47.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 54/190 (28%), Positives = 79/190 (41%)
Query: 1 MGSESSASLDEEVNVMVVDASVDGHCPTKKNKSRVPKRV---HKAEREKLKREHLNDLFL 57
+ S SSA +D +AS + P K + R KA REK +R+ LND F+
Sbjct: 38 VSSNSSAGVDGSAGNS--EASKE---PGSKKRGRCESSSATSSKACREKQRRDRLNDKFM 92
Query: 58 DLANAVEV-NQPNNGKACVLNEAARLLKDLFSQIESLNKENASLLSESHYVTIXXXXXXX 116
+L +E N P KA +L +A R++ L + + L N+SL + +
Sbjct: 93 ELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNELRD 152
Query: 117 XXXXXXXQIEVLQSELRARVVQSKPDLNIPPEFQQPELSSHFPGDSYGFPAAVEPTLSQA 176
+ E L+ +L+A +N P QP S FP P A QA
Sbjct: 153 EKQRLKTEKEKLEQQLKA--------MNAP----QP---SFFPAPPM-MPTAFASAQGQA 196
Query: 177 PAVLVVPIHS 186
P +VPI S
Sbjct: 197 PGNKMVPIIS 206
>TAIR|locus:2129710 [details] [associations]
symbol:bHLH104 "AT4G14410" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
EMBL:AL161538 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:Z97336 HOGENOM:HOG000238732
ProtClustDB:CLSN2689429 EMBL:AF488628 EMBL:AY102106 EMBL:AY133565
EMBL:AY088053 IPI:IPI00527516 IPI:IPI00532570 PIR:B71406
RefSeq:NP_567431.1 RefSeq:NP_849383.1 UniGene:At.4272
ProteinModelPortal:Q8L467 SMR:Q8L467 EnsemblPlants:AT4G14410.1
GeneID:827086 KEGG:ath:AT4G14410 TAIR:At4g14410 eggNOG:NOG307178
InParanoid:Q8L467 OMA:TKACRER PhylomeDB:Q8L467
Genevestigator:Q8L467 Uniprot:Q8L467
Length = 283
Score = 122 (48.0 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 39/148 (26%), Positives = 69/148 (46%)
Query: 22 VDGHCPTKKNKSRVPKRVH--KAEREKLKREHLNDLFLDLANAVEVNQ-PNNGKACVLNE 78
+D C K+ ++ R KA RE+L+RE LN+ F+DL++ +E + P K +L++
Sbjct: 114 LDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLSSVLEPGRTPKTDKPAILDD 173
Query: 79 AARLLKDLFSQIESLNKENASLLSESHYVTIXXXXXXXXXXXXXXQIEVLQSELRARVVQ 138
A R+L L + L + N LL E + E + +L++
Sbjct: 174 AIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKLVLKADKEKTEQQLKSMTAP 233
Query: 139 SKPDL-NIPPEFQQPELSSHFPGDSYGF 165
S + +IP F +++ +P SYG+
Sbjct: 234 SSGFIPHIPAAFNHNKMAV-YP--SYGY 258
>UNIPROTKB|Q6ZKI8 [details] [associations]
symbol:OJ1119_D01.9 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:HQ858852 EMBL:AP003876 EMBL:AK102951
RefSeq:NP_001060960.1 UniGene:Os.18333 IntAct:Q6ZKI8
EnsemblPlants:LOC_Os08g04390.2 GeneID:4344627 KEGG:osa:4344627
OMA:REKMRRN Uniprot:Q6ZKI8
Length = 253
Score = 112 (44.5 bits), Expect = 0.00023, P = 0.00023
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 41 KAEREKLKREHLNDLFLDLANAVEVNQP-NNGKACVLNEAARLLKDLFSQIESLNKENAS 99
KA REK++R+ +ND FL+L +E +P + KA +L++A R++ L ++ + L N S
Sbjct: 87 KASREKIRRDKMNDRFLELGTTLEPGKPVKSDKAAILSDATRMVIQLRAEAKQLKDTNES 146
Query: 100 L 100
L
Sbjct: 147 L 147
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.309 0.125 0.348 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 241 227 0.00079 113 3 11 23 0.50 33
32 0.41 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 588 (63 KB)
Total size of DFA: 159 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.55u 0.10s 23.65t Elapsed: 00:00:01
Total cpu time: 23.55u 0.10s 23.65t Elapsed: 00:00:01
Start: Fri May 10 03:11:40 2013 End: Fri May 10 03:11:41 2013