BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026214
(241 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 52 FSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RLISVMRFRESNRDGHGSCINNIVY 110
FS +EL++A++N+ KN++ +YKG + L++V R +E G V
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 111 AAQMS-HDHILKLIGCCLETPIPILAFESVEYGN----LRDRILSASQPQTEPLLMKHRL 165
M+ H ++L+L G C+ +L + + G+ LR+R SQP PL R
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER--PESQP---PLDWPKRQ 142
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+IA+ A LAYLH I++RD K A+IL +EE A + DF L+
Sbjct: 143 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 189
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 86/167 (51%), Gaps = 11/167 (6%)
Query: 52 FSAQELKLATNNYDQKNVITEDWGCILYKGFWQE-RLISVMRFRESNRDGHGSCINNIVY 110
FS +EL++A++N+ KN++ +YKG + L++V R +E G V
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 111 AAQMS-HDHILKLIGCCLETPIPILAFESVEYGN----LRDRILSASQPQTEPLLMKHRL 165
M+ H ++L+L G C+ +L + + G+ LR+R SQP PL R
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRER--PESQP---PLDWPKRQ 134
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+IA+ A LAYLH I++RD K A+IL +EE A + DF L+
Sbjct: 135 RIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLA 181
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 46 YNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERL-ISVMRFRESNRDGHGSC 104
+ YR+ +L+ ATNN+D K +I +YKG ++ +++ R + G
Sbjct: 24 FESYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF 82
Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
I + H H++ LIG C E IL ++ +E GNL+ + + P T + + R
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP-TMSMSWEQR 141
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
L+I + A L YLH R I++RD K+ +IL +E V K+ DF +S E G +
Sbjct: 142 LEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQT 195
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 85/168 (50%), Gaps = 6/168 (3%)
Query: 46 YNPYRIFSAQELKLATNNYDQKNVITEDWGCILYKGFWQERL-ISVMRFRESNRDGHGSC 104
+ YR+ +L+ ATNN+D K +I +YKG ++ +++ R + G
Sbjct: 24 FESYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEF 82
Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
I + H H++ LIG C E IL ++ +E GNL+ + + P T + + R
Sbjct: 83 ETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLP-TMSMSWEQR 141
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L+I + A L YLH R I++RD K+ +IL +E V K+ DF +S
Sbjct: 142 LEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGIS 186
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 49 YRIFSAQELKLATNNYDQK------NVITEDWGCILYKGFWQERLISVMRFRE----SNR 98
+ FS ELK TNN+D++ N + E ++YKG+ ++V + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 99 DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP 158
+ I A+ H+++++L+G + L + + G+L DR+ + T P
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPP 129
Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L R KIA A+ + +LH ++RD K+A+IL +E AK+ DF L+
Sbjct: 130 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 49 YRIFSAQELKLATNNYDQK------NVITEDWGCILYKGFWQERLISVMRFRE----SNR 98
+ FS ELK TNN+D++ N + E ++YKG+ ++V + +
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 99 DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP 158
+ I A+ H+++++L+G + L + + G+L DR+ + T P
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPP 129
Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L R KIA A+ + +LH ++RD K+A+IL +E AK+ DF L+
Sbjct: 130 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLA 180
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 83/174 (47%), Gaps = 15/174 (8%)
Query: 49 YRIFSAQELKLATNNYDQK------NVITEDWGCILYKGFWQERLISVMRFRE----SNR 98
+ FS ELK TNN+D++ N + E ++YKG+ ++V + +
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 65
Query: 99 DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP 158
+ I A+ H+++++L+G + L + + G+L DR+ + T P
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL--SCLDGTPP 123
Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L R KIA A+ + +LH ++RD K+A+IL +E AK+ DF L+
Sbjct: 124 LSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLA 174
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 15/174 (8%)
Query: 49 YRIFSAQELKLATNNYDQK------NVITEDWGCILYKGFWQERLISVMRFRE----SNR 98
+ FS ELK TNN+D++ N E ++YKG+ ++V + +
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 62
Query: 99 DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP 158
+ I A+ H+++++L+G + L + G+L DR+ + T P
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL--SCLDGTPP 120
Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L R KIA A+ + +LH ++RD K+A+IL +E AK+ DF L+
Sbjct: 121 LSWHXRCKIAQGAANGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLA 171
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 54/111 (48%), Gaps = 19/111 (17%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLR--------DRILSA-SQPQTEPLLMKHR 164
+ H+HI+K G C+E I+ FE +++G+L D +L A P TE L
Sbjct: 72 LQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTE-LTQSQM 130
Query: 165 LKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L IA IA + YL HF V+RD T + L E + K+ DF +S
Sbjct: 131 LHIAQQIAAGMVYLASQHF------VHRDLATRNCLVGENLLVKIGDFGMS 175
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 114 MSHDHILKLIGCCLETPIPIL--AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
+ H+HI+K GCC + L E V G+LRD + S + + L A I
Sbjct: 90 LYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS------IGLAQLLLFAQQI 143
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
+AYLH + ++RD ++L + + + K+ DF L+ ++PEG
Sbjct: 144 CEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 78 LYKGFWQERLISVMRFRESNRDGHGSCINN----IVYAAQMSHDHILKLIGCCLETPIPI 133
+++ W ++V E +D H +N + ++ H +I+ +G + P
Sbjct: 53 VHRAEWHGSDVAVKILME--QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
+ E + G+L R+L S + E L + RL +A D+A + YLH P PIV+RD K+
Sbjct: 111 IVTEYLSRGSLY-RLLHKSGAR-EQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRDLKS 167
Query: 194 AHILFNEENVAKMFDFSLS 212
++L +++ K+ DF LS
Sbjct: 168 PNLLVDKKYTVKVCDFGLS 186
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD 146
L++V +E++ + H HI++ G C E ++ FE + +G+L +
Sbjct: 73 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-N 131
Query: 147 RILSASQPQTE-----------PLLMKHRLKIAMDIAHALAY---LHFGFPRPIVYRDFK 192
R L + P + PL + L +A +A + Y LHF V+RD
Sbjct: 132 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLA 185
Query: 193 TAHILFNEENVAKMFDFSLSISI 215
T + L + V K+ DF +S I
Sbjct: 186 TRNCLVGQGLVVKIGDFGMSRDI 208
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 70/139 (50%), Gaps = 9/139 (6%)
Query: 78 LYKGFWQERLISVMRFRESNRDGHGSCINN----IVYAAQMSHDHILKLIGCCLETPIPI 133
+++ W ++V E +D H +N + ++ H +I+ +G + P
Sbjct: 53 VHRAEWHGSDVAVKILME--QDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLS 110
Query: 134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
+ E + G+L R+L S + E L + RL +A D+A + YLH P PIV+R+ K+
Sbjct: 111 IVTEYLSRGSLY-RLLHKSGAR-EQLDERRRLSMAYDVAKGMNYLHNRNP-PIVHRNLKS 167
Query: 194 AHILFNEENVAKMFDFSLS 212
++L +++ K+ DF LS
Sbjct: 168 PNLLVDKKYTVKVCDFGLS 186
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 18/147 (12%)
Query: 78 LYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQM----SHDHILKLIGCCLETPIPI 133
+Y+ FW ++V R + I N+ A++ H +I+ L G CL+ P
Sbjct: 23 VYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLC 82
Query: 134 LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
L E G L +R+LS + + L+ A+ IA + YLH PI++RD K+
Sbjct: 83 LVMEFARGGPL-NRVLSGKRIPPDILV-----NWAVQIARGMNYLHDEAIVPIIHRDLKS 136
Query: 194 AHILFNEE--------NVAKMFDFSLS 212
++IL ++ + K+ DF L+
Sbjct: 137 SNILILQKVENGDLSNKILKITDFGLA 163
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD 146
L++V +E++ + H HI++ G C E ++ FE + +G+L +
Sbjct: 44 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-N 102
Query: 147 RILSASQPQTE-----------PLLMKHRLKIAMDIAHALAY---LHFGFPRPIVYRDFK 192
R L + P + PL + L +A +A + Y LHF V+RD
Sbjct: 103 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLA 156
Query: 193 TAHILFNEENVAKMFDFSLSISI 215
T + L + V K+ DF +S I
Sbjct: 157 TRNCLVGQGLVVKIGDFGMSRDI 179
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 21/143 (14%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD 146
L++V +E++ + H HI++ G C E ++ FE + +G+L +
Sbjct: 50 LVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDL-N 108
Query: 147 RILSASQPQTE-----------PLLMKHRLKIAMDIAHALAY---LHFGFPRPIVYRDFK 192
R L + P + PL + L +A +A + Y LHF V+RD
Sbjct: 109 RFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHF------VHRDLA 162
Query: 193 TAHILFNEENVAKMFDFSLSISI 215
T + L + V K+ DF +S I
Sbjct: 163 TRNCLVGQGLVVKIGDFGMSRDI 185
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 88/199 (44%), Gaps = 31/199 (15%)
Query: 35 LKELIASSNGKYNP----YRIFSAQELKLATNNYDQKNVITE-DWGCILYKGFWQERL-- 87
+K+ +GK NP Y + ++K ++VI E ++G +L ++ L
Sbjct: 1 MKKHHHHHHGKNNPDPTIYPVLDWNDIKF-------QDVIGEGNFGQVLKARIKKDGLRM 53
Query: 88 -ISVMRFRE-SNRDGHGSCINNIVYAAQMSH-DHILKLIGCCLETPIPILAFESVEYGNL 144
++ R +E +++D H + ++ H +I+ L+G C LA E +GNL
Sbjct: 54 DAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNL 113
Query: 145 RDRILSASQPQTEP-----------LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
D + + +T+P L + L A D+A + YL + ++RD
Sbjct: 114 LDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAA 170
Query: 194 AHILFNEENVAKMFDFSLS 212
+IL E VAK+ DF LS
Sbjct: 171 RNILVGENYVAKIADFGLS 189
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 68/161 (42%), Gaps = 26/161 (16%)
Query: 75 GCILYKGFWQERLISV-MRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPI 133
G + Y+ F +++V M E++ D A+ + +I+KL+G C
Sbjct: 70 GLLPYEPF---TMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMC 126
Query: 134 LAFESVEYGNLRDRILS-------------------ASQPQTEPLLMKHRLKIAMDIAHA 174
L FE + YG+L + + S S P PL +L IA +A
Sbjct: 127 LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAG 186
Query: 175 LAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+AYL R V+RD T + L E V K+ DF LS +I
Sbjct: 187 MAYLS---ERKFVHRDLATRNCLVGENMVVKIADFGLSRNI 224
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 89 SVMRFRE-SNRDGHGSCINNIVYAAQMSH-DHILKLIGCCLETPIPILAFESVEYGNLRD 146
++ R +E +++D H + ++ H +I+ L+G C LA E +GNL D
Sbjct: 46 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 105
Query: 147 RILSASQPQTEP-----------LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
+ + +T+P L + L A D+A + YL + ++RD +
Sbjct: 106 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARN 162
Query: 196 ILFNEENVAKMFDFSLS 212
IL E VAK+ DF LS
Sbjct: 163 ILVGENYVAKIADFGLS 179
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 114 MSHDHILKLIGCCLETPIPIL--AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
+ H+HI+K GCC + L E V G+LRD + S + + L A I
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS------IGLAQLLLFAQQI 126
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
+AYLH + ++R+ ++L + + + K+ DF L+ ++PEG
Sbjct: 127 CEGMAYLH---AQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 53/107 (49%), Gaps = 11/107 (10%)
Query: 114 MSHDHILKLIGCCLETPIPIL--AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
+ H+HI+K GCC + L E V G+LRD + S + + L A I
Sbjct: 73 LYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS------IGLAQLLLFAQQI 126
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
+AYLH + ++R+ ++L + + + K+ DF L+ ++PEG
Sbjct: 127 CEGMAYLH---SQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEG 170
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 88 IEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 141
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 142 CLVGENHLVKVADFGLS 158
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++SH +++L G CLE L FE +E+G L D + + Q + L + +D+
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 113
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AYL +++RD + L E V K+ DF ++
Sbjct: 114 EGMAYLE---EASVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 88 IEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 141
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 142 CLVGENHLVKVADFGLS 158
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 86 IEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 139
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 140 CLVGENHLVKVADFGLS 156
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 30 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 88
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 89 IEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 142
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 143 CLVGENHLVKVADFGLS 159
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++SH +++L G CLE L FE +E+G L D + + Q + L + +D+
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 116
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AYL +++RD + L E V K+ DF ++
Sbjct: 117 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 153
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++SH +++L G CLE L FE +E+G L D + + Q + L + +D+
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 113
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AYL +++RD + L E V K+ DF ++
Sbjct: 114 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 150
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 86 TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 139
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 140 CLVGENHLVKVADFGLS 156
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 66/128 (51%), Gaps = 20/128 (15%)
Query: 90 VMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRIL 149
+ +F+E R+ + + ++H +I+KL G + P P + E V G+L R+L
Sbjct: 64 IEKFQEFQRE--------VFIMSNLNHPNIVKLYGL-MHNP-PRMVMEFVPCGDLYHRLL 113
Query: 150 SASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN--EENV---A 204
+ P+ +L++ +DIA + Y+ P PIV+RD ++ +I +EN A
Sbjct: 114 DKAH----PIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCA 168
Query: 205 KMFDFSLS 212
K+ DFSLS
Sbjct: 169 KVADFSLS 176
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 93 IEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 146
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 147 CLVGENHLVKVADFGLS 163
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 88 TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 141
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 142 CLVGENHLVKVADFGLS 158
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 27 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 85
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 86 TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 139
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 140 CLVGENHLVKVADFGLS 156
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 88 TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 141
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 142 CLVGENHLVKVADFGLS 158
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 93 TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 146
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 147 CLVGENHLVKVADFGLS 163
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++SH +++L G CLE L FE +E+G L D + + Q + L + +D+
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 111
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AYL +++RD + L E V K+ DF ++
Sbjct: 112 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 148
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 42 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 100
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 101 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 154
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 155 CLVGENHLVKVADFGLS 171
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 62/137 (45%), Gaps = 16/137 (11%)
Query: 89 SVMRFRE-SNRDGHGSCINNIVYAAQMSH-DHILKLIGCCLETPIPILAFESVEYGNLRD 146
++ R +E +++D H + ++ H +I+ L+G C LA E +GNL D
Sbjct: 53 AIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLD 112
Query: 147 RILSASQPQTEP-----------LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
+ + +T+P L + L A D+A + YL + ++R+ +
Sbjct: 113 FLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRNLAARN 169
Query: 196 ILFNEENVAKMFDFSLS 212
IL E VAK+ DF LS
Sbjct: 170 ILVGENYVAKIADFGLS 186
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 93 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 146
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 147 CLVGENHLVKVADFGLS 163
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 31 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 90 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 143
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 144 CLVGENHLVKVADFGLS 160
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 30 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 88
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 89 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 142
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 143 CLVGENHLVKVADFGLS 159
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 31 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 90 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 143
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 144 CLVGENHLVKVADFGLS 160
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++SH +++L G CLE L FE +E+G L D + + Q + L + +D+
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 133
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AYL +++RD + L E V K+ DF ++
Sbjct: 134 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 170
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 31 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 89
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 90 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 143
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 144 CLVGENHLVKVADFGLS 160
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 114 MSHDHILKLIGCCLET--PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
+ H+HI+K GCC + L E V G+LRD + + LL A I
Sbjct: 67 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL------FAQQI 120
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
+AYLH + ++R ++L + + + K+ DF L+ ++PEG
Sbjct: 121 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG 164
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 51/107 (47%), Gaps = 11/107 (10%)
Query: 114 MSHDHILKLIGCCLET--PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
+ H+HI+K GCC + L E V G+LRD + + LL A I
Sbjct: 68 LYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLL------FAQQI 121
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
+AYLH + ++R ++L + + + K+ DF L+ ++PEG
Sbjct: 122 CEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEG 165
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 88 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 141
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 142 CLVGENHLVKVADFGLS 158
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 33 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 91
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 92 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 145
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 146 CLVGENHLVKVADFGLS 162
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 93 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 146
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 147 CLVGENHLVKVADFGLS 163
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 11/138 (7%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCC-LETPIPIL 134
+Y G W++ ++V +E + + ++ H ++++L+G C LE P I+
Sbjct: 48 VYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIV 106
Query: 135 AFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTA 194
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD
Sbjct: 107 T-EYMPYGNLLDYLRECNREEVTAVVL---LYMATQISSAMEYLE---KKNFIHRDLAAR 159
Query: 195 HILFNEENVAKMFDFSLS 212
+ L E +V K+ DF LS
Sbjct: 160 NCLVGENHVVKVADFGLS 177
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 34 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 92
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 93 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 146
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 147 CLVGENHLVKVADFGLS 163
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 29 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 87
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++RD +
Sbjct: 88 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRDLAARN 141
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 142 CLVGENHLVKVADFGLS 158
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 65/128 (50%), Gaps = 20/128 (15%)
Query: 90 VMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRIL 149
+ +F+E R+ + + ++H +I+KL G + P P + E V G+L R+L
Sbjct: 64 IEKFQEFQRE--------VFIMSNLNHPNIVKLYGL-MHNP-PRMVMEFVPCGDLYHRLL 113
Query: 150 SASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN--EENV---A 204
+ P+ +L++ +DIA + Y+ P PIV+RD ++ +I +EN A
Sbjct: 114 DKAH----PIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCA 168
Query: 205 KMFDFSLS 212
K+ DF LS
Sbjct: 169 KVADFGLS 176
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 111 AAQMSHDHILKLIGCC-LETP---IPILAFESVEYGNLRDRILSASQPQTE-PLLMKHRL 165
AA ++H I+ + ETP +P + E V+ LRD + TE P+ K +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
++ IA A L+F I++RD K A+IL + N K+ DF ++ +I + G S
Sbjct: 120 EV---IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNS 172
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q H HI+KLIG E P+ I+ E G LR S Q + L + + A ++
Sbjct: 70 QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 124
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
ALAYL + V+RD ++L + + K+ DF LS
Sbjct: 125 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 161
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q H HI+KLIG E P+ I+ E G LR S Q + L + + A ++
Sbjct: 72 QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 126
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
ALAYL + V+RD ++L + + K+ DF LS
Sbjct: 127 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q H HI+KLIG E P+ I+ E G LR S Q + L + + A ++
Sbjct: 69 QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 123
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
ALAYL + V+RD ++L + + K+ DF LS
Sbjct: 124 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 160
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 111 AAQMSHDHILKLIGCC-LETP---IPILAFESVEYGNLRDRILSASQPQTE-PLLMKHRL 165
AA ++H I+ + ETP +P + E V+ LRD + TE P+ K +
Sbjct: 66 AAALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
++ IA A L+F I++RD K A+I+ + N K+ DF ++ +I + G S
Sbjct: 120 EV---IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 233 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 291
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++R+ +
Sbjct: 292 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRNLAARN 345
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 346 CLVGENHLVKVADFGLS 362
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q H HI+KLIG E P+ I+ E G LR S Q + L + + A ++
Sbjct: 67 QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 121
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
ALAYL + V+RD ++L + + K+ DF LS
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q H HI+KLIG E P+ I+ E G LR S Q + L + + A ++
Sbjct: 67 QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 121
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
ALAYL + V+RD ++L + + K+ DF LS
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q H HI+KLIG E P+ I+ E G LR S Q + L + + A ++
Sbjct: 95 QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 149
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
ALAYL + V+RD ++L + + K+ DF LS
Sbjct: 150 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 186
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 236 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 294
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++R+ +
Sbjct: 295 TEFMTYGNLLDYLRECNRQEVSAVVL---LYMATQISSAMEYLE---KKNFIHRNLAARN 348
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 349 CLVGENHLVKVADFGLS 365
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q H HI+KLIG E P+ I+ E G LR S Q + L + + A ++
Sbjct: 64 QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKYSLDLASLILYAYQLS 118
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
ALAYL + V+RD ++L + + K+ DF LS
Sbjct: 119 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 155
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 111 AAQMSHDHILKLIGCC-LETP---IPILAFESVEYGNLRDRILSASQPQTE-PLLMKHRL 165
AA ++H I+ + ETP +P + E V+ LRD + TE P+ K +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
++ IA A L+F I++RD K A+I+ + N K+ DF ++ +I + G S
Sbjct: 120 EV---IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 111 AAQMSHDHILKLIGCC-LETP---IPILAFESVEYGNLRDRILSASQPQTE-PLLMKHRL 165
AA ++H I+ + ETP +P + E V+ LRD + TE P+ K +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
++ IA A L+F I++RD K A+I+ + N K+ DF ++ +I + G S
Sbjct: 120 EV---IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 77 ILYKGFWQERLISVMRFR-ESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
++ K W+ + +++ + ES R I + ++++H +I+KL G CL P+ L
Sbjct: 24 VVCKAKWRAKDVAIKQIESESERKAF---IVELRQLSRVNHPNIVKLYGACL-NPV-CLV 78
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E E G+L + +L ++P H + + + +AYLH P+ +++RD K +
Sbjct: 79 MEYAEGGSLYN-VLHGAEPLPY-YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 136
Query: 196 ILF-NEENVAKMFDFSLSISI 215
+L V K+ DF + I
Sbjct: 137 LLLVAGGTVLKICDFGTACDI 157
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 69/141 (48%), Gaps = 9/141 (6%)
Query: 77 ILYKGFWQERLISVMRFR-ESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
++ K W+ + +++ + ES R I + ++++H +I+KL G CL P+ L
Sbjct: 23 VVCKAKWRAKDVAIKQIESESERKAF---IVELRQLSRVNHPNIVKLYGACL-NPV-CLV 77
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E E G+L + +L ++P H + + + +AYLH P+ +++RD K +
Sbjct: 78 MEYAEGGSLYN-VLHGAEPLPY-YTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPN 135
Query: 196 ILF-NEENVAKMFDFSLSISI 215
+L V K+ DF + I
Sbjct: 136 LLLVAGGTVLKICDFGTACDI 156
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 58/116 (50%), Gaps = 14/116 (12%)
Query: 111 AAQMSHDHILKLIGCC-LETP---IPILAFESVEYGNLRDRILSASQPQTE-PLLMKHRL 165
AA ++H I+ + ETP +P + E V+ LRD + TE P+ K +
Sbjct: 66 AAALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAI 119
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
++ IA A L+F I++RD K A+I+ + N K+ DF ++ +I + G S
Sbjct: 120 EV---IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS 172
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 66/137 (48%), Gaps = 9/137 (6%)
Query: 78 LYKGFWQER--LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILA 135
+Y+G W++ ++V +E + + ++ H ++++L+G C P +
Sbjct: 275 VYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYII 333
Query: 136 FESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAH 195
E + YGNL D + ++ + +++ L +A I+ A+ YL + ++R+ +
Sbjct: 334 TEFMTYGNLLDYLRECNRQEVNAVVL---LYMATQISSAMEYLE---KKNFIHRNLAARN 387
Query: 196 ILFNEENVAKMFDFSLS 212
L E ++ K+ DF LS
Sbjct: 388 CLVGENHLVKVADFGLS 404
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q H HI+KLIG E P+ I+ E G LR S Q + L + + A ++
Sbjct: 67 QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKFSLDLASLILYAYQLS 121
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
ALAYL + V+RD ++L + + K+ DF LS
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 158
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 130 PIPILAFESVEYGNLRDRILSASQPQTE-PLLMKHRLKIAMDIAHALAYLHFGFPRPIVY 188
P+P + E V+ LRD + TE P+ K +++ IA A L+F I++
Sbjct: 106 PLPYIVMEYVDGVTLRDIV------HTEGPMTPKRAIEV---IADACQALNFSHQNGIIH 156
Query: 189 RDFKTAHILFNEENVAKMFDFSLSISIPEGGTS 221
RD K A+I+ + N K+ DF ++ +I + G S
Sbjct: 157 RDVKPANIMISATNAVKVMDFGIARAIADSGNS 189
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 20/113 (17%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRD---------RILSASQPQTEP--LLMK 162
+ H+HI+K G C + I+ FE +++G+L IL QP+ L +
Sbjct: 74 LQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 133
Query: 163 HRLKIAMDIAHALAYL---HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L IA IA + YL HF V+RD T + L + K+ DF +S
Sbjct: 134 QMLHIASQIASGMVYLASQHF------VHRDLATRNCLVGANLLVKIGDFGMS 180
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q H HI+KLIG E P+ I+ E G LR S Q + L + + A ++
Sbjct: 67 QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKFSLDLASLILYAYQLS 121
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
ALAYL + V+RD ++L + + K+ DF LS
Sbjct: 122 TALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLS 158
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q H HI+KLIG E P+ I+ E G LR S Q + L + + A ++
Sbjct: 447 QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKFSLDLASLILYAYQLS 501
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
ALAYL + V+RD ++L + + K+ DF LS
Sbjct: 502 TALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLS 538
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 56/112 (50%), Gaps = 13/112 (11%)
Query: 115 SHDHILKLIGCCLE-----TPIPILAFESVEYGNLRDRILSA---SQPQTEPLLMKHRLK 166
SH ++++L+G C+E P P++ ++YG+L +L + + P+ PL + LK
Sbjct: 94 SHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPL--QTLLK 151
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
+DIA + YL R ++RD + + ++ + DF LS I G
Sbjct: 152 FMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSG 200
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 48/100 (48%), Gaps = 8/100 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q H HI+KLIG E P+ I+ E G LR S Q + L + + A ++
Sbjct: 447 QFDHPHIVKLIGVITENPVWII-MELCTLGELR----SFLQVRKFSLDLASLILYAYQLS 501
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
ALAYL + V+RD ++L + + K+ DF LS
Sbjct: 502 TALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLS 538
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++SH +++L G CLE L E +E+G L D + + Q + L + +D+
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL----RTQRGLFAAETLLGMCLDVC 114
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AYL +++RD + L E V K+ DF ++
Sbjct: 115 EGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMT 151
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 20/128 (15%)
Query: 90 VMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRIL 149
+ +F+E R+ + + ++H +I+KL G + P P + E V G+L R+L
Sbjct: 64 IEKFQEFQRE--------VFIMSNLNHPNIVKLYGL-MHNP-PRMVMEFVPCGDLYHRLL 113
Query: 150 SASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFN--EENV---A 204
+ P+ +L++ +DIA + Y+ P PIV+RD ++ +I +EN A
Sbjct: 114 DKAH----PIKWSVKLRLMLDIALGIEYMQNQNP-PIVHRDLRSPNIFLQSLDENAPVCA 168
Query: 205 KMFDFSLS 212
K+ DF S
Sbjct: 169 KVADFGTS 176
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 7/115 (6%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q SH +I++LIG C + + E V+ G+ L+ + + L +K L++ D A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF----LTFLRTEGARLRVKTLLQMVGDAA 223
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLK 227
+ YL + ++RD + L E+NV K+ DF +S +G + + L+
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLR 275
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 32/139 (23%)
Query: 102 GSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD----RILSASQPQTE 157
GS VY + D +K++ TP + AF++ E G LR IL T+
Sbjct: 33 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMGYSTK 91
Query: 158 PLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
P L MK + IA A + YLH + I++RD K+
Sbjct: 92 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKS 148
Query: 194 AHILFNEENVAKMFDFSLS 212
+I +E+N K+ DF L+
Sbjct: 149 NNIFLHEDNTVKIGDFGLA 167
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQ------------------- 153
Q++H H++KL G C + +L E +YG+LR + + +
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 154 PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI 213
P L M + A I+ + YL +V+RD +IL E K+ DF LS
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMSLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 214 SIPE 217
+ E
Sbjct: 199 DVYE 202
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQ------------------- 153
Q++H H++KL G C + +L E +YG+LR + + +
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 154 PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI 213
P L M + A I+ + YL +V+RD +IL E K+ DF LS
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 214 SIPE 217
+ E
Sbjct: 199 DVYE 202
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 51/124 (41%), Gaps = 22/124 (17%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQ------------------- 153
Q++H H++KL G C + +L E +YG+LR + + +
Sbjct: 82 QVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDH 141
Query: 154 PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSI 213
P L M + A I+ + YL +V+RD +IL E K+ DF LS
Sbjct: 142 PDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
Query: 214 SIPE 217
+ E
Sbjct: 199 DVYE 202
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 23/168 (13%)
Query: 63 NYDQKNVIT---EDWGCILYKGFWQ--ERLISVMRFRE----SNRDGHGSCINNIVYAAQ 113
++ Q N +T E+ L+KG WQ + ++ V++ R+ +RD + C ++
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF--- 64
Query: 114 MSHDHILKLIGCCLETPI--PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
SH ++L ++G C P P L + YG+L + + + + +K A+D+
Sbjct: 65 -SHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVD---QSQAVKFALDM 120
Query: 172 AHALAYLHFGFPRPIVYRD-FKTAHILFNEENVAK--MFDFSLSISIP 216
A +A+LH P++ R + ++ +E+ A+ M D S P
Sbjct: 121 ARGMAFLHTL--EPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSP 166
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q SH +I++LIG C + + E V+ G+ L+ + + L +K L++ D A
Sbjct: 168 QYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF----LTFLRTEGARLRVKTLLQMVGDAA 223
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL + ++RD + L E+NV K+ DF +S
Sbjct: 224 AGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMS 260
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 32/139 (23%)
Query: 102 GSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD----RILSASQPQTE 157
GS VY + D +K++ TP + AF++ E G LR IL T+
Sbjct: 21 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMGYSTK 79
Query: 158 PLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
P L MK + IA A + YLH + I++RD K+
Sbjct: 80 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKS 136
Query: 194 AHILFNEENVAKMFDFSLS 212
+I +E+N K+ DF L+
Sbjct: 137 NNIFLHEDNTVKIGDFGLA 155
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 32/139 (23%)
Query: 102 GSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD----RILSASQPQTE 157
GS VY + D +K++ TP + AF++ E G LR IL T
Sbjct: 33 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMGYSTA 91
Query: 158 PLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
P L MK + IA A + YLH + I++RD K+
Sbjct: 92 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKS 148
Query: 194 AHILFNEENVAKMFDFSLS 212
+I +E+N K+ DF L+
Sbjct: 149 NNIFLHEDNTVKIGDFGLA 167
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 104 RDYL----QAHAERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 156
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 157 KIGDFGLTKVLPQ 169
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 103
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 104 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 156
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 157 KIGDFGLTKVLPQ 169
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 46 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 105
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 106 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 158
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 159 KIGDFGLTKVLPQ 171
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 48 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 107
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 108 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 160
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 161 KIGDFGLTKVLPQ 173
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 47 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 106
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 107 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 159
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 160 KIGDFGLTKVLPQ 172
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 101 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 153
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 154 KIGDFGLTKVLPQ 166
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 113 QMSHDHILKLIGCCLET------PIPILAFESVEYGNLRDRILSASQPQTEP--LLMKHR 164
+ H H+ KL+G L + PIP++ +++G+L +L AS+ P L ++
Sbjct: 81 EFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLL-ASRIGENPFNLPLQTL 139
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAK 224
++ +DIA + YL R ++RD + + E+ + DF LS I G
Sbjct: 140 VRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQG 196
Query: 225 C 225
C
Sbjct: 197 C 197
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 59 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 119 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 171
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 172 KIGDFGLTKVLPQ 184
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 40 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 99
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 100 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 152
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 153 KIGDFGLTKVLPQ 165
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 101 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 153
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 154 KIGDFGLTKVLPQ 166
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 59 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 118
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 119 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 171
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 172 KIGDFGLTKVLPQ 184
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNL-------RDRILSASQPQTEPLLMKHRLKI 167
H +++ L+G C + P++ E ++GNL R+ + + L ++H +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXY 149
Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 150 SFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKIXDFGLARDI 194
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 39 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 98
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 99 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 151
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 152 KIGDFGLTKVLPQ 164
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 72 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 131
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 132 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 184
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 185 KIGDFGLTKVLPQ 197
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 41 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 100
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 101 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 153
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 154 KIGDFGLTKVLPQ 166
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 45 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 104
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 105 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 157
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 158 KIGDFGLTKVLPQ 170
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ H +++L + PI I+ E +E G+L D + P L + L +A IA
Sbjct: 59 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 114
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL ++ K+ DF L+
Sbjct: 115 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 151
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 113 QMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q+ H ++++L+G +E + + E + G+L D + S + L LK ++D+
Sbjct: 70 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDV 126
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A+ YL V+RD ++L +E+NVAK+ DF L+
Sbjct: 127 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 164
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ H +++L + PI I+ E +E G+L D + P L + L +A IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 119
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL ++ K+ DF L+
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E L K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ A +A + YL + ++RD ++L E+NV K+ DF L+ I
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ H +++L + PI I+ E +E G+L D + P L + L +A IA
Sbjct: 65 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 120
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL ++ K+ DF L+
Sbjct: 121 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 157
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ H +++L + PI I+ E +E G+L D + P L + L +A IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 119
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL ++ K+ DF L+
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E L K
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ A +A + YL + ++RD ++L E+NV K+ DF L+ I
Sbjct: 145 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 192
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ H +++L + PI I+ E +E G+L D + + P L + L +A IA
Sbjct: 69 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIA 124
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL ++ K+ DF L+
Sbjct: 125 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 161
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ H +++L + PI I+ E +E G+L D + + P L + L +A IA
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIA 125
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL ++ K+ DF L+
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 162
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E L K
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ A +A + YL + ++RD ++L E+NV K+ DF L+ I
Sbjct: 194 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 241
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ H +++L + PI I+ E +E G+L D + + P L + L +A IA
Sbjct: 72 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIA 127
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL ++ K+ DF L+
Sbjct: 128 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 164
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ H +++L + PI I+ E +E G+L D + P L + L +A IA
Sbjct: 66 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL---KTPSGIKLTINKLLDMAAQIA 121
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL ++ K+ DF L+
Sbjct: 122 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 158
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E L K
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ A +A + YL + ++RD ++L E+NV K+ DF L+ I
Sbjct: 142 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 189
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E L K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ A +A + YL + ++RD ++L E+NV K+ DF L+ I
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 112 AQMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMD 170
Q+ H ++++L+G +E + + E + G+L D + S + L LK ++D
Sbjct: 241 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLD 297
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ A+ YL V+RD ++L +E+NVAK+ DF L+
Sbjct: 298 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 336
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 112 AQMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMD 170
Q+ H ++++L+G +E + + E + G+L D + S + L LK ++D
Sbjct: 54 TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLD 110
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ A+ YL V+RD ++L +E+NVAK+ DF L+
Sbjct: 111 VCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 149
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E L K
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ A +A + YL + ++RD ++L E+NV K+ DF L+ I
Sbjct: 138 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 185
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ H +++L + PI I+ E +E G+L D + + P L + L +A IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIA 119
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL ++ K+ DF L+
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 53/101 (52%), Gaps = 7/101 (6%)
Query: 113 QMSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q+ H ++++L+G +E + + E + G+L D + S + L LK ++D+
Sbjct: 61 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGR---SVLGGDCLLKFSLDV 117
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A+ YL V+RD ++L +E+NVAK+ DF L+
Sbjct: 118 CEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLT 155
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ H +++L + PI I+ E +E G+L D + + P L + L +A IA
Sbjct: 64 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIA 119
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL ++ K+ DF L+
Sbjct: 120 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 156
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E L K
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ A +A + YL + ++RD ++L E+NV K+ DF L+ I
Sbjct: 146 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 193
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ H +++L + PI I+ E +E G+L D + + P L + L +A IA
Sbjct: 70 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIA 125
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL ++ K+ DF L+
Sbjct: 126 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 162
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ H +++L + PI I+ E +E G+L D + + P L + L +A IA
Sbjct: 74 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIA 129
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL ++ K+ DF L+
Sbjct: 130 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 166
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ H +++L + PI I+ E +E G+L D + + P L + L +A IA
Sbjct: 73 QLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFLKT---PSGIKLTINKLLDMAAQIA 128
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL ++ K+ DF L+
Sbjct: 129 EGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLA 165
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 115 SHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 88 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVAK 143
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL + V+RD + + +E+ K+ DF L+
Sbjct: 144 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 114 MSHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVA 143
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL + V+RD + + +E+ K+ DF L+
Sbjct: 144 KGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 114 MSHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 86 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVA 141
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL + V+RD + + +E+ K+ DF L+
Sbjct: 142 KGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 114 MSHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 80 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVA 135
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL + V+RD + + +E+ K+ DF L+
Sbjct: 136 KGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 172
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E L K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ A +A + YL + ++RD ++L E+NV K+ DF L+ I
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 115 SHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 107 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVAK 162
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL + V+RD + + +E+ K+ DF L+
Sbjct: 163 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 198
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E L K
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ A +A + YL + ++RD ++L E+NV K+ DF L+ I
Sbjct: 153 VSCAYQVARGMEYLA---SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI 200
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 114 MSHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 87 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVA 142
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL + V+RD + + +E+ K+ DF L+
Sbjct: 143 KGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 179
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 115 SHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 89 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVAK 144
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL + V+RD + + +E+ K+ DF L+
Sbjct: 145 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 115 SHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 86 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVAK 141
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL + V+RD + + +E+ K+ DF L+
Sbjct: 142 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 177
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 11/108 (10%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNL-------RDRILSASQPQTEPLLMKHRLKI 167
H +++ L+G C + P++ E ++GNL R+ + + L ++H +
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICY 149
Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 150 SFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDI 194
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 8/99 (8%)
Query: 115 SHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 108 SHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVAK 163
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL + V+RD + + +E+ K+ DF L+
Sbjct: 164 GMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 199
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++M RE+ I + Y A + + H+ +L+G CL +
Sbjct: 65 VYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 124
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 125 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 176
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 177 LAARNVLVKTPQHVKITDFGLA 198
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 114 MSHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 83 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVA 138
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL + V+RD + + +E+ K+ DF L+
Sbjct: 139 KGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 175
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 55/111 (49%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNL-------RDRILSASQPQT---EPLLMKHR 164
H +++ L+G C + P++ E ++GNL R+ + P+ + L ++H
Sbjct: 91 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHL 150
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 151 ICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 42 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSL 101
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
RD + Q E + L+ I + YL G R ++R+ T +IL EN
Sbjct: 102 RDYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRNLATRNILVENENRV 154
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 155 KIGDFGLTKVLPQ 167
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNLRDRILSAS------QPQT---EPLLMKHRL 165
H +++ L+G C + P++ E ++GNL + S +P+ + L ++H +
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLI 151
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 152 XYSFQVAKGMEFLA---SRKXIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF--ESVEYGNL 144
+++V + + S + I + HD+I+K G C L E + YG+L
Sbjct: 44 VVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSL 103
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA 204
R+ + Q E + L+ I + YL G R ++RD T +IL EN
Sbjct: 104 REYL----QKHKERIDHIKLLQYTSQICKGMEYL--GTKR-YIHRDLATRNILVENENRV 156
Query: 205 KMFDFSLSISIPE 217
K+ DF L+ +P+
Sbjct: 157 KIGDFGLTKVLPQ 169
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
++ + A M H H+++L+G CL +P L + + +G L + + LL
Sbjct: 88 MDEALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLL---- 142
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L + IA + YL R +V+RD ++L N K+ DF L+
Sbjct: 143 LNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA 187
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 8/108 (7%)
Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
++ + A M H H+++L+G CL +P L + + +G L + + LL
Sbjct: 65 MDEALIMASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLL---- 119
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L + IA + YL R +V+RD ++L N K+ DF L+
Sbjct: 120 LNWCVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLA 164
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 114 MSHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 89 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVA 144
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ +L + V+RD + + +E+ K+ DF L+
Sbjct: 145 KGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 114 MSHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 89 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVA 144
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ +L + V+RD + + +E+ K+ DF L+
Sbjct: 145 KGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 181
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/101 (23%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 113 QMSHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +
Sbjct: 146 DFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQV 201
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + +L + V+RD + + +E+ K+ DF L+
Sbjct: 202 AKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 239
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 114 MSHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVA 143
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ +L + V+RD + + +E+ K+ DF L+
Sbjct: 144 KGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
+ HD ++KL + PI I+ E + G+L D L + + +PL + + IA
Sbjct: 240 LQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLD-FLKSDEGSKQPL--PKLIDFSAQIAE 295
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL + V K+ DF L+
Sbjct: 296 GMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLA 331
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTE-----PLLMKHRLKIAMD 170
H++I+ L+G C ++ E YG+L + + ++ + PL ++ L +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 168
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+A +A+L + ++RD ++L +VAK+ DF L+ I
Sbjct: 169 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 210
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 114 MSHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 88 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVA 143
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ +L + V+RD + + +E+ K+ DF L+
Sbjct: 144 KGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 180
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 114 MSHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 86 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVA 141
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ +L + V+RD + + +E+ K+ DF L+
Sbjct: 142 KGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 178
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 52/120 (43%), Gaps = 23/120 (19%)
Query: 115 SHDHILKLIGCC-LETPIPILAFESVEYGNL------------RDRILSASQPQTEP--- 158
SH++I+ L+G C L PI L FE YG+L D I +Q + E
Sbjct: 107 SHENIVNLLGACTLSGPI-YLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEED 165
Query: 159 ---LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
L + L A +A + +L F + V+RD ++L V K+ DF L+ I
Sbjct: 166 LNVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDI 222
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 51/105 (48%), Gaps = 8/105 (7%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTE-----PLLMKHRLKIAMD 170
H++I+ L+G C ++ E YG+L + + ++ + PL ++ L +
Sbjct: 101 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQ 160
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+A +A+L + ++RD ++L +VAK+ DF L+ I
Sbjct: 161 VAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 202
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 59/125 (47%), Gaps = 16/125 (12%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
+ HD ++KL + PI I+ E + G+L D L + + +PL + + IA
Sbjct: 234 LQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLD-FLKSDEGSKQPL--PKLIDFSAQIAE 289
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS---------ISIPEGGTSGAK 224
+A++ R ++RD + A+IL + V K+ DF L+ + PE G+
Sbjct: 290 GMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWTAPEAINFGSF 346
Query: 225 CLKSE 229
+KS+
Sbjct: 347 TIKSD 351
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 114 MSHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
SH ++L L+G CL + P++ +++G+LR+ I + + T +K + + +A
Sbjct: 93 FSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPT----VKDLIGFGLQVA 148
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ +L + V+RD + + +E+ K+ DF L+
Sbjct: 149 KGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLA 185
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 10/136 (7%)
Query: 86 RLISVMRFRESNRDGHGSCI--NNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGN 143
R++++ +F ES+ D I I Q+ H++++ L+ C + L FE V++
Sbjct: 51 RIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTI 110
Query: 144 LRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENV 203
L D L + + + K I + + + H I++RD K +IL ++ V
Sbjct: 111 LDDLELFPNGLDYQVVQ-----KYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGV 162
Query: 204 AKMFDFSLSISIPEGG 219
K+ DF + ++ G
Sbjct: 163 VKLCDFGFARTLAAPG 178
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 7/99 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
+ HD ++KL + PI I+ E + G+L D L + + +PL + + IA
Sbjct: 67 LQHDKLVKLHAVVTKEPIYIIT-EFMAKGSLLD-FLKSDEGSKQPL--PKLIDFSAQIAE 122
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+A++ R ++RD + A+IL + V K+ DF L+
Sbjct: 123 GMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLA 158
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 32 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 91
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 92 VQLI-MQLMPFGXLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 143
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 144 LAARNVLVKTPQHVKITDFGLA 165
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 91 VQLIT-QLMPFGXLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 143 LAARNVLVKTPQHVKITDFGLA 164
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E + K
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + YL + ++RD ++L E NV K+ DF L+ I
Sbjct: 149 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 196
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNLRDRILSASQ---PQTEP--------LLMKH 163
H +++ L+G C + P++ E ++GNL + S P E L ++H
Sbjct: 92 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEH 151
Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 152 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 200
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 59/128 (46%), Gaps = 18/128 (14%)
Query: 63 NYDQKNVIT---EDWGCILYKGFWQ--ERLISVMRFRE----SNRDGHGSCINNIVYAAQ 113
++ Q N +T E+ L+KG WQ + ++ V++ R+ +RD + C ++
Sbjct: 8 DFKQLNFLTKLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIF--- 64
Query: 114 MSHDHILKLIGCCLETPI--PILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
SH ++L ++G C P P L YG+L + + + + +K A+D
Sbjct: 65 -SHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHEGTNFVVD---QSQAVKFALDX 120
Query: 172 AHALAYLH 179
A A+LH
Sbjct: 121 ARGXAFLH 128
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E + K
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + YL + ++RD ++L E NV K+ DF L+ I
Sbjct: 147 VSCTYQLARGMEYLA---SQKCIHRDLTARNVLVTENNVMKIADFGLARDI 194
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E + K
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + YL + ++RD ++L E NV K+ DF L+ I
Sbjct: 152 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 199
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E + K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + YL + ++RD ++L E NV K+ DF L+ I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E + K
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + YL + ++RD ++L E NV K+ DF L+ I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E + K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + YL + ++RD ++L E NV K+ DF L+ I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 91 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 143 LAARNVLVKTPQHVKITDFGLA 164
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 92
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 93 VQLI-MQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 145 LAARNVLVKTPQHVKITDFGLA 166
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 38 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 97
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 98 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 150 LAARNVLVKTPQHVKITDFGLA 171
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 38 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 97
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 98 VQLI-MQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 150 LAARNVLVKTPQHVKITDFGLA 171
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 38 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 97
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 98 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 150 LAARNVLVKTPQHVKITDFGLA 171
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E + K
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + YL + ++RD ++L E NV K+ DF L+ I
Sbjct: 206 VSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDI 253
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E + K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + YL + ++RD ++L E NV K+ DF L+ I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 56 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 115
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 116 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 167
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 168 LAARNVLVKTPQHVKITDFGLA 189
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 32 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 91
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 92 VQLI-MQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 143
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 144 LAARNVLVKTPQHVKITDFGLA 165
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 34 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 93
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 94 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 146 LAARNVLVKTPQHVKITDFGLA 167
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 34 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 93
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 94 VQLI-MQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 146 LAARNVLVKTPQHVKITDFGLA 167
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 28 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 87
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 88 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAEGMNYLE---DRRLVHRD 139
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 140 LAARNVLVKTPQHVKITDFGLA 161
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN A ++H++++K G E I L E G L DRI P+ +
Sbjct: 57 CIN-----AMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 112 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E + K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + YL + ++RD ++L E NV K+ DF L+ I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 92
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 93 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 145 LAARNVLVKTPQHVKITDFGLA 166
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 34 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 93
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 94 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 146 LAARNVLVKTPQHVKITDFGLA 167
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 34 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 93
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 94 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 145
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 146 LAARNVLVKTPQHVKITDFGLA 167
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E + K
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + YL + ++RD ++L E NV K+ DF L+ I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 91 VQLI-MQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 143 LAARNVLVKTPQHVKITDFGLA 164
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 35 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 94
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 95 VQLI-MQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 146
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 147 LAARNVLVKTPQHVKITDFGLA 168
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 91 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 143 LAARNVLVKTPQHVKITDFGLA 164
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 41 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 100
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 101 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 152
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 153 LAARNVLVKTPQHVKITDFGLA 174
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 25 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 84
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 85 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 136
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 137 LAARNVLVKTPQHVKITDFGLA 158
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 91 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 143 LAARNVLVKTPQHVKITDFGLA 164
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 15/142 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 37 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 96
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 97 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 148
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L K+ DF L+
Sbjct: 149 LAARNVLVKTPQHVKITDFGLA 170
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNLRDRILSASQP----QTEP-------LLMKH 163
H +++ L+G C + P++ E ++GNL + S + P L ++H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNLRDRILSASQP----QTEP-------LLMKH 163
H +++ L+G C + P++ E ++GNL + S + P L ++H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + + L + + +A IA
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYIVG-EYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIA 290
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 291 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 327
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNLRDRILSASQP----QTEP-------LLMKH 163
H +++ L+G C + P++ E ++GNL + S + P L ++H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 56 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 111 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNLRDRILSASQP----QTEP-------LLMKH 163
H +++ L+G C + P++ E ++GNL + S + P L ++H
Sbjct: 81 HLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 140
Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 141 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 189
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 57 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 112 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNLRDRILSASQP----QTEP-------LLMKH 163
H +++ L+G C + P++ E ++GNL + S + P L ++H
Sbjct: 127 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 186
Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 187 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 235
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + + L + + +A IA
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIA 290
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 291 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLA 327
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + + L + + +A IA
Sbjct: 318 KLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIA 373
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 374 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 410
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
++H I+++ G + + + +E G L +L SQ P+ + A ++
Sbjct: 63 VTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFS-LLRKSQRFPNPVAKFY----AAEVCL 117
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE 217
AL YLH + I+YRD K +IL ++ K+ DF + +P+
Sbjct: 118 ALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD 158
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + + L + + +A IA
Sbjct: 235 KLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIA 290
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 291 SGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLA 327
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + + L + + +A IA
Sbjct: 59 KLRHEKLVQLYAVVSEEPIXIVT-EYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIA 114
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 115 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 151
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 8/107 (7%)
Query: 111 AAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMD 170
++Q+SH +I+ +I E L E +E L + I S PL + +
Sbjct: 65 SSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-----PLSVDTAINFTNQ 119
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE 217
I + + H IV+RD K +IL + K+FDF ++ ++ E
Sbjct: 120 ILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSE 163
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 57 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 112 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 57 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 112 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNLRDRILSASQP----QTEP-------LLMKH 163
H +++ L+G C + P++ E ++GNL + S + P L ++H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 57 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 112 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNLRDRILSASQP----QTEP-------LLMKH 163
H +++ L+G C + P++ E ++GNL + S + P L ++H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Query: 116 HDHILKLIGCCLETPIPILAF-ESVEYGNLRDRILSASQP----QTEP-------LLMKH 163
H +++ L+G C + P++ E ++GNL + S + P L ++H
Sbjct: 90 HLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEH 149
Query: 164 RLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 150 LICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 198
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 22/153 (14%)
Query: 67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCC 126
K + T +G + Y G W+ + ++ + I +SH+ +++L G C
Sbjct: 30 KELGTGQFGVVKY-GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 127 L-ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR------LKIAMDIAHALAYLH 179
+ PI I+ E + G L + + M+HR L++ D+ A+ YL
Sbjct: 89 TKQRPIFIIT-EYMANGCLLNYLRE----------MRHRFQTQQLLEMCKDVCEAMEYLE 137
Query: 180 FGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ ++RD + L N++ V K+ DF LS
Sbjct: 138 ---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCC 126
K + T +G + Y G W+ + ++ + I +SH+ +++L G C
Sbjct: 21 KELGTGQFGVVKY-GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 79
Query: 127 L-ETPIPILAFESVEYGNLRDRILSASQP-QTEPLLMKHRLKIAMDIAHALAYLHFGFPR 184
+ PI I+ E + G L + + QT+ LL ++ D+ A+ YL +
Sbjct: 80 TKQRPIFIIT-EYMANGCLLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLE---SK 130
Query: 185 PIVYRDFKTAHILFNEENVAKMFDFSLS 212
++RD + L N++ V K+ DF LS
Sbjct: 131 QFLHRDLAARNCLVNDQGVVKVSDFGLS 158
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 18/143 (12%)
Query: 78 LYKGFWQ-ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETP----IP 132
+Y G W E I ++ N D + ++ Q H++++ +G C+ P I
Sbjct: 49 VYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108
Query: 133 ILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFK 192
L Y +RD + +T +IA +I + YLH + I+++D K
Sbjct: 109 SLCKGRTLYSVVRDAKIVLDVNKTR--------QIAQEIVKGMGYLH---AKGILHKDLK 157
Query: 193 TAHILFNEENVAKMFDFSL-SIS 214
+ ++ ++ V + DF L SIS
Sbjct: 158 SKNVFYDNGKVV-ITDFGLFSIS 179
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 46/111 (41%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + E GNLR+ + + P E + K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + YL + ++RD ++L E NV ++ DF L+ I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMRIADFGLARDI 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 55 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 109
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 110 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 150
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 22/176 (12%)
Query: 53 SAQELKLATNNYDQKNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCIN--NIVY 110
+A E L +N +I +YKG ER ++V F +NR + IN NI
Sbjct: 4 AASEPSLDLDNLKLLELIGRGRYGAVYKGSLDERPVAVKVFSFANRQ---NFINEKNIYR 60
Query: 111 AAQMSHDHILKLIGCCLETPIP-----ILAFESVEYGNLRDRILSASQPQTEPLLMKHRL 165
M HD+I + I +L E G+L + LS T + RL
Sbjct: 61 VPLMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLX-KYLSL---HTSDWVSSCRL 116
Query: 166 KIAMDIAHALAYLHFGFPR------PIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
A + LAYLH PR I +RD + ++L + + DF LS+ +
Sbjct: 117 --AHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL 170
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 56 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 111 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 56 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 111 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 56 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 111 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 56 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 111 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 57 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 112 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 56 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 111 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 118 HILKLIGCCLETPIPILAFESVEYGNLRDRILS-----ASQPQTEPLLMKHRLKIAMDIA 172
H+++L+G + ++ E + G+L+ + S + P P + +++A +IA
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 142
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE 217
+AYL+ V+RD + + E+ K+ DF ++ I E
Sbjct: 143 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 184
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 56 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 111 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCC 126
K + T +G + Y G W+ + ++ + I +SH+ +++L G C
Sbjct: 14 KELGTGQFGVVKY-GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 72
Query: 127 L-ETPIPILAFESVEYGNLRDRILSASQP-QTEPLLMKHRLKIAMDIAHALAYLHFGFPR 184
+ PI I+ E + G L + + QT+ LL ++ D+ A+ YL +
Sbjct: 73 TKQRPIFIIT-EYMANGCLLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLE---SK 123
Query: 185 PIVYRDFKTAHILFNEENVAKMFDFSLS 212
++RD + L N++ V K+ DF LS
Sbjct: 124 QFLHRDLAARNCLVNDQGVVKVSDFGLS 151
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCC 126
K + T +G + Y G W+ + ++ + I +SH+ +++L G C
Sbjct: 15 KELGTGQFGVVKY-GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 127 L-ETPIPILAFESVEYGNLRDRILSASQP-QTEPLLMKHRLKIAMDIAHALAYLHFGFPR 184
+ PI I+ E + G L + + QT+ LL ++ D+ A+ YL +
Sbjct: 74 TKQRPIFIIT-EYMANGCLLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLE---SK 124
Query: 185 PIVYRDFKTAHILFNEENVAKMFDFSLS 212
++RD + L N++ V K+ DF LS
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCC 126
K + T +G + Y G W+ + ++ + I +SH+ +++L G C
Sbjct: 10 KELGTGQFGVVKY-GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 68
Query: 127 L-ETPIPILAFESVEYGNLRDRILSASQP-QTEPLLMKHRLKIAMDIAHALAYLHFGFPR 184
+ PI I+ E + G L + + QT+ LL ++ D+ A+ YL +
Sbjct: 69 TKQRPIFIIT-EYMANGCLLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLE---SK 119
Query: 185 PIVYRDFKTAHILFNEENVAKMFDFSLS 212
++RD + L N++ V K+ DF LS
Sbjct: 120 QFLHRDLAARNCLVNDQGVVKVSDFGLS 147
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 12/148 (8%)
Query: 67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCC 126
K + T +G + Y G W+ + ++ + I +SH+ +++L G C
Sbjct: 15 KELGTGQFGVVKY-GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 73
Query: 127 L-ETPIPILAFESVEYGNLRDRILSASQP-QTEPLLMKHRLKIAMDIAHALAYLHFGFPR 184
+ PI I+ E + G L + + QT+ LL ++ D+ A+ YL +
Sbjct: 74 TKQRPIFIIT-EYMANGCLLNYLREMRHRFQTQQLL-----EMCKDVCEAMEYLE---SK 124
Query: 185 PIVYRDFKTAHILFNEENVAKMFDFSLS 212
++RD + L N++ V K+ DF LS
Sbjct: 125 QFLHRDLAARNCLVNDQGVVKVSDFGLS 152
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 66/153 (43%), Gaps = 22/153 (14%)
Query: 67 KNVITEDWGCILYKGFWQERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCC 126
K + T +G + Y G W+ + ++ + I +SH+ +++L G C
Sbjct: 30 KELGTGQFGVVKY-GKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVC 88
Query: 127 L-ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR------LKIAMDIAHALAYLH 179
+ PI I+ E + G L + + M+HR L++ D+ A+ YL
Sbjct: 89 TKQRPIFIIT-EYMANGCLLNYLRE----------MRHRFQTQQLLEMCKDVCEAMEYLE 137
Query: 180 FGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ ++RD + L N++ V K+ DF LS
Sbjct: 138 ---SKQFLHRDLAARNCLVNDQGVVKVSDFGLS 167
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 118 HILKLIGCCLETPIPILAFESVEYGNLRDRILS-----ASQPQTEPLLMKHRLKIAMDIA 172
H+++L+G + ++ E + G+L+ + S + P P + +++A +IA
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIA 133
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE 217
+AYL+ V+RD + + E+ K+ DF ++ I E
Sbjct: 134 DGMAYLN---ANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE 175
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
+ H ++++L G L P+ ++ E G+L DR+ + L+ + A+ +A
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 126
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE 217
+ YL + ++RD ++L ++ K+ DF L ++P+
Sbjct: 127 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 167
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 56 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 111 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 56 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 111 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 56 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 110
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 111 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 15/110 (13%)
Query: 104 CINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMK 162
CIN + ++H++++K G E I L E G L DRI P+ +
Sbjct: 57 CINKM-----LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFF 111
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
H+L + H + I +RD K ++L +E + K+ DF L+
Sbjct: 112 HQLMAGVVYLHGIG---------ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 35.8 bits (81), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G ++ ++ E +E G+L D L Q + + L+ I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GI 156
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + YL GF V+RD +IL N V K+ DF LS
Sbjct: 157 ASGMKYLSDMGF----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G ++ ++ E +E G+L D L Q + + L+ I
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLR---GI 127
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + YL G+ V+RD +IL N V K+ DF LS
Sbjct: 128 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + + L + + +A IA
Sbjct: 62 KLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGET---GKYLRLPQLVDMAAQIA 117
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 118 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 154
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
+ H ++++L G L P+ ++ E G+L DR+ + L+ + A+ +A
Sbjct: 72 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 126
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE 217
+ YL + ++RD ++L ++ K+ DF L ++P+
Sbjct: 127 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 167
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
+ H ++++L G L P+ ++ E G+L DR+ + L+ + A+ +A
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 132
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE 217
+ YL + ++RD ++L ++ K+ DF L ++P+
Sbjct: 133 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
+ H ++++L G L P+ ++ E G+L DR+ + L+ + A+ +A
Sbjct: 78 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 132
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE 217
+ YL + ++RD ++L ++ K+ DF L ++P+
Sbjct: 133 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 173
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 35.4 bits (80), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
+ H ++++L G L P+ ++ E G+L DR+ + L+ + A+ +A
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 122
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE 217
+ YL + ++RD ++L ++ K+ DF L ++P+
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.4 bits (80), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 157 EPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
EP+ M+ + + +A + +L R ++RD +IL +E NV K+ DF L+ I
Sbjct: 194 EPITMEDLISYSFQVARGMEFLS---SRKCIHRDLAARNILLSENNVVKICDFGLARDI 249
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
+ H ++++L G L P+ ++ E G+L DR+ + L+ + A+ +A
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 122
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE 217
+ YL + ++RD ++L ++ K+ DF L ++P+
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 35.4 bits (80), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 186 IVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
IVYRD K +IL ++ ++ D L++ +PEG T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/104 (22%), Positives = 50/104 (48%), Gaps = 8/104 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
+ H ++++L G L P+ ++ E G+L DR+ + L+ + A+ +A
Sbjct: 68 LDHRNLIRLYGVVLTPPMKMVT-ELAPLGSLLDRL----RKHQGHFLLGTLSRYAVQVAE 122
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPE 217
+ YL + ++RD ++L ++ K+ DF L ++P+
Sbjct: 123 GMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQ 163
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 22/35 (62%)
Query: 186 IVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
IVYRD K +IL ++ ++ D L++ +PEG T
Sbjct: 307 IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 341
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + L + + +A IA
Sbjct: 236 KLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIA 291
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L
Sbjct: 292 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLG 328
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 32/139 (23%)
Query: 102 GSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD----RILSASQPQTE 157
GS VY + D +K++ TP + AF++ E G LR IL T+
Sbjct: 45 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMGYSTK 103
Query: 158 PLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
P L M + IA A + YLH + I++RD K+
Sbjct: 104 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKS 160
Query: 194 AHILFNEENVAKMFDFSLS 212
+I +E+ K+ DF L+
Sbjct: 161 NNIFLHEDLTVKIGDFGLA 179
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G ++ ++ E +E G+L D L Q + + L+ I
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GI 127
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + YL G+ V+RD +IL N V K+ DF LS
Sbjct: 128 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 165
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 32/139 (23%)
Query: 102 GSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD----RILSASQPQTE 157
GS VY + D +K++ TP + AF++ E G LR IL T+
Sbjct: 45 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMGYSTK 103
Query: 158 PLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
P L M + IA A + YLH + I++RD K+
Sbjct: 104 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKS 160
Query: 194 AHILFNEENVAKMFDFSLS 212
+I +E+ K+ DF L+
Sbjct: 161 NNIFLHEDLTVKIGDFGLA 179
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G ++ ++ E +E G+L D L Q + + L+ I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLR---GI 156
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + YL G+ V+RD +IL N V K+ DF LS
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 35.0 bits (79), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 46/101 (45%), Gaps = 11/101 (10%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRI--LSASQPQTEPLLMKHRLKIAMDI 171
+ H ++LK IG + E ++ G LR I + + P ++ R+ A DI
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQ------RVSFAKDI 117
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A +AYLH I++RD + + L E + DF L+
Sbjct: 118 ASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLA 155
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 53/123 (43%), Gaps = 18/123 (14%)
Query: 114 MSHDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
+ H HI +L LET I + E G L D I+S + E + R I
Sbjct: 65 LRHQHICQLYHV-LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFR-----QIV 118
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTE 232
A+AY+H + +RD K ++LF+E + K+ DF L P+G K +
Sbjct: 119 SAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK-PKGN-------KDYHLQ 167
Query: 233 ICC 235
CC
Sbjct: 168 TCC 170
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G ++ ++ E +E G+L D L Q + + L+ I
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GI 144
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + YL G+ V+RD +IL N V K+ DF LS
Sbjct: 145 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 182
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 35.0 bits (79), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 32/139 (23%)
Query: 102 GSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD----RILSASQPQTE 157
GS VY + D +K++ TP + AF++ E G LR IL T+
Sbjct: 44 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMGYSTK 102
Query: 158 PLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
P L M + IA A + YLH + I++RD K+
Sbjct: 103 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKS 159
Query: 194 AHILFNEENVAKMFDFSLS 212
+I +E+ K+ DF L+
Sbjct: 160 NNIFLHEDLTVKIGDFGLA 178
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ HD +++L E PI I+ E + G+L D + + L + + + +A +A
Sbjct: 60 KLKHDKLVQLYAVVSEEPIYIVT-EYMNKGSLLDFLKDG---EGRALKLPNLVDMAAQVA 115
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ ++RD ++A+IL + K+ DF L+
Sbjct: 116 AGMAYIER---MNYIHRDLRSANILVGNGLICKIADFGLA 152
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 35.0 bits (79), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 92
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 93 VQLI-MQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 191 FKTAHILFNEENVAKMFDFS 210
++L K+ DF
Sbjct: 145 LAARNVLVKTPQHVKITDFG 164
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 114 MSHDHILKLIGCCL-ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
+ HD +++L E PI I+ E + G+L D + S + +L+ + + IA
Sbjct: 65 LQHDKLVRLYAVVTREEPIYIIT-EYMAKGSLLDFLKSDEGGK---VLLPKLIDFSAQIA 120
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ + ++RD + A++L +E + K+ DF L+
Sbjct: 121 EGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLA 157
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 38 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 97
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 98 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 149
Query: 191 FKTAHILFNEENVAKMFDFS 210
++L K+ DF
Sbjct: 150 LAARNVLVKTPQHVKITDFG 169
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + GNLR+ + + P E + K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + YL + ++RD ++L E NV K+ DF L+ I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 92
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 93 VQLI-MQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 191 FKTAHILFNEENVAKMFDFS 210
++L K+ DF
Sbjct: 145 LAARNVLVKTPQHVKITDFG 164
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 35.0 bits (79), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 12/68 (17%)
Query: 167 IAMDIAHALAYLHFGFP-------RP-IVYRDFKTAHILFNEENVAKMFDFSLSISI--- 215
+A ++ L+YLH P +P I +RDFK+ ++L + A + DF L++
Sbjct: 117 VAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPG 176
Query: 216 -PEGGTSG 222
P G T G
Sbjct: 177 KPPGDTHG 184
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 33 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 92
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 93 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 144
Query: 191 FKTAHILFNEENVAKMFDFS 210
++L K+ DF
Sbjct: 145 LAARNVLVKTPQHVKITDFG 164
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 32/139 (23%)
Query: 102 GSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD----RILSASQPQTE 157
GS VY + D +K++ TP + AF++ E G LR IL T+
Sbjct: 37 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMGYSTK 95
Query: 158 PLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
P L M + IA A + YLH + I++RD K+
Sbjct: 96 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKS 152
Query: 194 AHILFNEENVAKMFDFSLS 212
+I +E+ K+ DF L+
Sbjct: 153 NNIFLHEDLTVKIGDFGLA 171
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + L + + +A IA
Sbjct: 60 KLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIA 115
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 116 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 152
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 52/109 (47%), Gaps = 12/109 (11%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-QTEP--------LLMKHRLK 166
H++I+ L+G C ++ E YG+L + + S+ +T+P L + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLH 168
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A +A+L + ++RD ++L +VAK+ DF L+ I
Sbjct: 169 FSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + L + + +A IA
Sbjct: 58 KLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIA 113
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 114 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 150
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + L + + +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIA 124
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 34/145 (23%)
Query: 96 SNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD----RILSA 151
R G GS VY + D +K++ TP + AF++ E G LR IL
Sbjct: 18 GQRIGSGSF--GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLF 74
Query: 152 SQPQTEPLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIV 187
T+P L M + IA A + YLH + I+
Sbjct: 75 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSII 131
Query: 188 YRDFKTAHILFNEENVAKMFDFSLS 212
+RD K+ +I +E+ K+ DF L+
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLA 156
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 91 MRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILS 150
+R + + + I I ++ H +I+KL +L FE ++ +L+ ++L
Sbjct: 34 IRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLK-KLLD 91
Query: 151 ASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS 210
+ E + K L + + + +AY H R +++RD K ++L N E K+ DF
Sbjct: 92 VCEGGLESVTAKSFL---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFG 145
Query: 211 LS 212
L+
Sbjct: 146 LA 147
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 91 MRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILS 150
+R + + + I I ++ H +I+KL +L FE ++ +L+ ++L
Sbjct: 34 IRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLK-KLLD 91
Query: 151 ASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS 210
+ E + K L + + + +AY H R +++RD K ++L N E K+ DF
Sbjct: 92 VCEGGLESVTAKSFL---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFG 145
Query: 211 LS 212
L+
Sbjct: 146 LA 147
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 31 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 90
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 91 VQLIT-QLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 142
Query: 191 FKTAHILFNEENVAKMFDFS 210
++L K+ DF
Sbjct: 143 LAARNVLVKTPQHVKITDFG 162
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 78 LYKGFW---QERL---ISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W E++ +++ RE+ I + Y A + + H+ +L+G CL +
Sbjct: 35 VYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST 94
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + +G L D + + + + ++ L + IA + YL R +V+RD
Sbjct: 95 VQLI-MQLMPFGCLLDYV----REHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRD 146
Query: 191 FKTAHILFNEENVAKMFDFS 210
++L K+ DF
Sbjct: 147 LAARNVLVKTPQHVKITDFG 166
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + L + + +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIV-IEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIA 124
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 51/100 (51%), Gaps = 8/100 (8%)
Query: 114 MSHDHILKLIGCCL-ETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
+ HD +++L E PI I+ E + G+L D + S + +L+ + + IA
Sbjct: 64 LQHDKLVRLYAVVTKEEPIYIIT-EFMAKGSLLDFLKSDEGGK---VLLPKLIDFSAQIA 119
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ + ++RD + A++L +E + K+ DF L+
Sbjct: 120 EGMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLA 156
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 29/122 (23%), Positives = 57/122 (46%), Gaps = 8/122 (6%)
Query: 91 MRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILS 150
+R + + + I I ++ H +I+KL +L FE ++ +L+ ++L
Sbjct: 34 IRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-DLK-KLLD 91
Query: 151 ASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS 210
+ E + K L + + + +AY H R +++RD K ++L N E K+ DF
Sbjct: 92 VCEGGLESVTAKSFL---LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFG 145
Query: 211 LS 212
L+
Sbjct: 146 LA 147
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + L + + +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIV-IEYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIA 124
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H +I+ L+G C + + GNLR+ + + P E + K
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A + YL + ++RD ++L E NV K+ DF L+ I
Sbjct: 160 VSCTYQLARGMEYLA---SQKCIHRDLAARNVLVTENNVMKIADFGLARDI 207
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 22/153 (14%)
Query: 78 LYKGFWQERLISVMRFRESNRDGHGSCINNIVY-AAQMSHDHILKLIGCCL-----ETPI 131
+++G W ++V F S+RD +Y + HD+IL I + T +
Sbjct: 24 VWRGLWHGESVAVKIF--SSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQL 81
Query: 132 PILAFESVEYGNLRDRILSASQPQT-EPLLMKHRLKIAMDIAHALAYLH---FGFP-RP- 185
++ E+G+L D + Q QT EP L L++A+ A LA+LH FG +P
Sbjct: 82 WLITHYH-EHGSLYDFL----QRQTLEPHLA---LRLAVSAACGLAHLHVEIFGTQGKPA 133
Query: 186 IVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
I +RDFK+ ++L + D L++ +G
Sbjct: 134 IAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQG 166
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + + L + + ++ IA
Sbjct: 66 KLRHEKLVQLYAVVSEEPIYIVT-EYMNKGSLLDFLKGET---GKYLRLPQLVDMSAQIA 121
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 122 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 158
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 34/145 (23%)
Query: 96 SNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD----RILSA 151
R G GS VY + D +K++ TP + AF++ E G LR IL
Sbjct: 13 GQRIGSGSF--GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLF 69
Query: 152 SQPQTEPLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIV 187
T+P L M + IA A + YLH + I+
Sbjct: 70 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 188 YRDFKTAHILFNEENVAKMFDFSLS 212
+RD K+ +I +E+ K+ DF L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 23/156 (14%)
Query: 71 TEDWGCI--LYKGFWQERLISVMRFRES-------NRDGHGSCINNI----VYAAQMSHD 117
EDW + L +G + E ++V R E + C NI ++H+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 118 HILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMKHRLKIAMDIAHALA 176
+++K G E I L E G L DRI P+ + H+L + H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 177 YLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I +RD K ++L +E + K+ DF L+
Sbjct: 125 ---------ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 23/156 (14%)
Query: 71 TEDWGCI--LYKGFWQERLISVMRFRES-------NRDGHGSCINNI----VYAAQMSHD 117
EDW + L +G + E ++V R E + C NI ++H+
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 118 HILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMKHRLKIAMDIAHALA 176
+++K G E I L E G L DRI P+ + H+L + H +
Sbjct: 66 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 125
Query: 177 YLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I +RD K ++L +E + K+ DF L+
Sbjct: 126 ---------ITHRDIKPENLLLDERDNLKISDFGLA 152
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 34.7 bits (78), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
KIA+ I AL +LH +++RD K +++L N KM DF +S
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS 201
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
L I + IA A+ +LH + +++RD K ++I F ++V K+ DF L ++
Sbjct: 121 LHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 168
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 55/139 (39%), Gaps = 32/139 (23%)
Query: 102 GSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR----ILSASQPQTE 157
GS VY + D +K++ TP + AF++ E G LR IL T+
Sbjct: 22 GSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLFMGYSTK 80
Query: 158 PLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKT 193
P L M + IA A + YLH + I++RD K+
Sbjct: 81 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSIIHRDLKS 137
Query: 194 AHILFNEENVAKMFDFSLS 212
+I +E+ K+ DF L+
Sbjct: 138 NNIFLHEDLTVKIGDFGLA 156
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 34.7 bits (78), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 57/122 (46%), Gaps = 21/122 (17%)
Query: 114 MSHDHILKLIGC-----CLETPIPIL-AFESVEYGNLRDRILSASQPQTEPLLMKHRLKI 167
M H++IL+ IG ++ + ++ AF E G+L D L A+ L I
Sbjct: 75 MKHENILQFIGAEKRGTSVDVDLWLITAFH--EKGSLSD-FLKANVVSWNELC-----HI 126
Query: 168 AMDIAHALAYLHFGFP------RP-IVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
A +A LAYLH P +P I +RD K+ ++L A + DF L++ G +
Sbjct: 127 AETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS 186
Query: 221 SG 222
+G
Sbjct: 187 AG 188
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 34/145 (23%)
Query: 96 SNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR----ILSA 151
R G GS VY + D +K++ TP + AF++ E G LR IL
Sbjct: 13 GQRIGSGSF--GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLF 69
Query: 152 SQPQTEPLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIV 187
T+P L M + IA A + YLH + I+
Sbjct: 70 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 188 YRDFKTAHILFNEENVAKMFDFSLS 212
+RD K+ +I +E+ K+ DF L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G ++ ++ E +E G+L D L Q + + L+ I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GI 156
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + YL G+ V+RD +IL N V K+ DF LS
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G ++ ++ E +E G+L D L Q + + L+ I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GI 156
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + YL G+ V+RD +IL N V K+ DF LS
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 62/156 (39%), Gaps = 23/156 (14%)
Query: 71 TEDWGCI--LYKGFWQERLISVMRFRES-------NRDGHGSCINNI----VYAAQMSHD 117
EDW + L +G + E ++V R E + C NI ++H+
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 118 HILKLIGCCLETPIPILAFESVEYGNLRDRI-LSASQPQTEPLLMKHRLKIAMDIAHALA 176
+++K G E I L E G L DRI P+ + H+L + H +
Sbjct: 65 NVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIG 124
Query: 177 YLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I +RD K ++L +E + K+ DF L+
Sbjct: 125 ---------ITHRDIKPENLLLDERDNLKISDFGLA 151
>pdb|3R5T|A Chain A, Crystal Structure Of Holo-Viup
Length = 305
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 101 HGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGN-LRDRILSASQPQTEPL 159
HG + N V AQ +H +L+ +G LE P P S+ + + LR +Q Q E
Sbjct: 171 HGPGVVNAVAKAQSAHAQLLQSVGVVLEEPDPAWQAGSIVHRDFLRIHYEHLTQLQAETT 230
Query: 160 LMKHRLKIAMDIAHALAYLH 179
+ I M A A+LH
Sbjct: 231 FL-----ITMTDQQAQAFLH 245
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + L + + +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVC-EYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIA 124
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 34.7 bits (78), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G ++ ++ E +E G+L D L Q + + L+ I
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GI 154
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + YL G+ V+RD +IL N V K+ DF LS
Sbjct: 155 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 192
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G ++ ++ E +E G+L D L Q + + L+ I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GI 156
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + YL G+ V+RD +IL N V K+ DF LS
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 34.7 bits (78), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q S+ L + C +T + F +EY N D + + + P +H + +I+
Sbjct: 76 QASNHPFLVGLHSCFQTESRL--FFVIEYVNGGDLMFHMQRQRKLP--EEHARFYSAEIS 131
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL 211
AL YLH R I+YRD K ++L + E K+ D+ +
Sbjct: 132 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGM 167
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + L + + +A IA
Sbjct: 69 KIRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIA 124
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 34/145 (23%)
Query: 96 SNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR----ILSA 151
R G GS VY + D +K++ TP + AF++ E G LR IL
Sbjct: 15 GQRIGSGSF--GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLF 71
Query: 152 SQPQTEPLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIV 187
T+P L M + IA A + YLH + I+
Sbjct: 72 MGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSII 128
Query: 188 YRDFKTAHILFNEENVAKMFDFSLS 212
+RD K+ +I +E+ K+ DF L+
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLA 153
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 158 PLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
PL LKI A+ ++H P PI++RD K ++L + + K+ DF + +I
Sbjct: 132 PLSCDTVLKIFYQTCRAVQHMHRQKP-PIIHRDLKVENLLLSNQGTIKLCDFGSATTI 188
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G ++ ++ E +E G+L D L Q + + L+ I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GI 156
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + YL G+ V+RD +IL N V K+ DF LS
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + + L + + ++ IA
Sbjct: 66 KLRHEKLVQLYAVVSEEPIYIVT-EYMNKGSLLDFLKGET---GKYLRLPQLVDMSAQIA 121
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 122 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 158
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 34.7 bits (78), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q S+ L + C +T + F +EY N D + + + P +H + +I+
Sbjct: 108 QASNHPFLVGLHSCFQTESRL--FFVIEYVNGGDLMFHMQRQRKLP--EEHARFYSAEIS 163
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKC 225
AL YLH R I+YRD K ++L + E K+ D+ + + G T+ C
Sbjct: 164 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFC 214
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 9/48 (18%)
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L +A+D H+L I+YRD K +IL +EE K+ DF LS
Sbjct: 135 LALALDHLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 51/127 (40%), Gaps = 9/127 (7%)
Query: 99 DGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEP 158
D H I Y + H HI+KL + TP I+ G L D I+ + TE
Sbjct: 51 DMHMRVEREISYLKLLRHPHIIKLYDV-ITTPTDIVMVIEYAGGELFDYIVEKKR-MTE- 107
Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
+ I A+ Y H IV+RD K ++L ++ K+ DF LS + +G
Sbjct: 108 ---DEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDG 161
Query: 219 GTSGAKC 225
C
Sbjct: 162 NFLKTSC 168
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 34.3 bits (77), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 9/48 (18%)
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L +A+D H+L I+YRD K +IL +EE K+ DF LS
Sbjct: 135 LALALDHLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLS 173
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 34.3 bits (77), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 9/48 (18%)
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L +A+D H+L I+YRD K +IL +EE K+ DF LS
Sbjct: 136 LALALDHLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLS 174
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
Query: 94 RESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQ 153
++ D ++ V + H HI+KLIG E P I+ E YG L L ++
Sbjct: 50 KDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII-MELYPYGEL-GHYLERNK 107
Query: 154 PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ L + + ++ I A+AYL V+RD +IL K+ DF LS
Sbjct: 108 NSLKVLTL---VLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLS 160
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 34.3 bits (77), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
Query: 114 MSHDHILKLIGCCLETPIP--ILAFESVEYGNLRDRILSASQPQTE-PLLMKHRLKIAMD 170
+ H++I+K G C E L E + G+L++ + P+ + + +K +LK A+
Sbjct: 80 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-----PKNKNKINLKQQLKYAVQ 134
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
I + YL R V+RD ++L E+ K+ DF L+ +I
Sbjct: 135 ICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 176
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-QTEPLL--------MKHRLK 166
H++I+ L+G C ++ E YG+L + + S+ +T+P + L
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLH 168
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A +A+L + ++RD ++L +VAK+ DF L+ I
Sbjct: 169 FSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 214
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 33.9 bits (76), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 11/105 (10%)
Query: 114 MSHDHILKLIGCCLETPIP--ILAFESVEYGNLRDRILSASQPQTE-PLLMKHRLKIAMD 170
+ H++I+K G C E L E + G+L++ + P+ + + +K +LK A+
Sbjct: 68 LYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL-----PKNKNKINLKQQLKYAVQ 122
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
I + YL R V+RD ++L E+ K+ DF L+ +I
Sbjct: 123 ICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAI 164
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 33.9 bits (76), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
KIA+ I AL +LH +++RD K +++L N KM DF +S
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGIS 157
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 51/119 (42%), Gaps = 8/119 (6%)
Query: 94 RESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQ 153
++ D ++ V + H HI+KLIG E P I+ E YG L L ++
Sbjct: 46 KDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII-MELYPYGEL-GHYLERNK 103
Query: 154 PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ L + + ++ I A+AYL V+RD +IL K+ DF LS
Sbjct: 104 NSLKVLTL---VLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLS 156
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 33.9 bits (76), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 49/119 (41%), Gaps = 8/119 (6%)
Query: 94 RESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQ 153
++ D ++ V + H HI+KLIG E P I+ E YG L + +
Sbjct: 62 KDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII-MELYPYGELGHYL----E 116
Query: 154 PQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L + + ++ I A+AYL V+RD +IL K+ DF LS
Sbjct: 117 RNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLS 172
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 56/145 (38%), Gaps = 34/145 (23%)
Query: 96 SNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDR----ILSA 151
R G GS VY + D +K++ TP + AF++ E G LR IL
Sbjct: 13 GQRIGSGSF--GTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN-EVGVLRKTRHVNILLF 69
Query: 152 SQPQTEPLL------------------------MKHRLKIAMDIAHALAYLHFGFPRPIV 187
T P L M + IA A + YLH + I+
Sbjct: 70 MGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLH---AKSII 126
Query: 188 YRDFKTAHILFNEENVAKMFDFSLS 212
+RD K+ +I +E+ K+ DF L+
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLA 151
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 33.9 bits (76), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q S+ L + C +T + F +EY N D + + + P +H + +I+
Sbjct: 61 QASNHPFLVGLHSCFQTESRL--FFVIEYVNGGDLMFHMQRQRKLP--EEHARFYSAEIS 116
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKC 225
AL YLH R I+YRD K ++L + E K+ D+ + + G T+ C
Sbjct: 117 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFC 167
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 33.9 bits (76), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
L I + IA A+ +LH + +++RD K ++I F ++V K+ DF L ++
Sbjct: 167 LHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM 214
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKCLKS 228
+I AL YLH R +VYRD K +++ +++ K+ DF L I +G T C
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTP 169
Query: 229 E 229
E
Sbjct: 170 E 170
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKC 225
+I+ AL +LH + I+YRD K +I+ N + K+ DF L SI +G + C
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFC 182
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 33.9 bits (76), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q S+ L + C +T + F +EY N D + + + P +H + +I+
Sbjct: 65 QASNHPFLVGLHSCFQTESRL--FFVIEYVNGGDLMFHMQRQRKLP--EEHARFYSAEIS 120
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL 211
AL YLH R I+YRD K ++L + E K+ D+ +
Sbjct: 121 LALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGM 156
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 59/136 (43%), Gaps = 9/136 (6%)
Query: 78 LYKGFWQ-ERLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAF 136
+YKG W + + +++ + + + N + + H +IL +G + + I+
Sbjct: 52 VYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVT- 110
Query: 137 ESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHI 196
+ E +L + Q M + IA A + YLH + I++RD K+ +I
Sbjct: 111 QWCEGSSLYKHL----HVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNI 163
Query: 197 LFNEENVAKMFDFSLS 212
+E K+ DF L+
Sbjct: 164 FLHEGLTVKIGDFGLA 179
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 33.9 bits (76), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 4/126 (3%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRD 146
L V F + CI I Q++H +++K +E + E + G+L
Sbjct: 62 LKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL-S 120
Query: 147 RILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKM 206
R++ + Q + + K + + AL ++H R +++RD K A++ V K+
Sbjct: 121 RMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKL 177
Query: 207 FDFSLS 212
D L
Sbjct: 178 GDLGLG 183
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G+L D + + L + + +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVT-EYMSKGSLLDFLKGE---MGKYLRLPQLVDMAAQIA 124
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD A+IL E V K+ DF L+
Sbjct: 125 SGMAYVER---MNYVHRDLAAANILVGENLVCKVADFGLA 161
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKC 225
+I AL YLH R +VYRD K +++ +++ K+ DF L I +G T C
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 166
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 7/101 (6%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G ++ ++ E +E G+L D L Q + + L+ I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLR---GI 156
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + YL V+RD +IL N V K+ DF LS
Sbjct: 157 ASGMKYLS---DMGAVHRDLAARNILINSNLVCKVSDFGLS 194
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 33.9 bits (76), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKC 225
+I AL YLH R +VYRD K +++ +++ K+ DF L I +G T C
Sbjct: 116 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC 169
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKC 225
+I AL YLH R +VYRD K +++ +++ K+ DF L I +G T C
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKC 225
+I+ AL +LH + I+YRD K +I+ N + K+ DF L SI +G + C
Sbjct: 129 EISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFC 182
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKC 225
+I AL YLH R +VYRD K +++ +++ K+ DF L I +G T C
Sbjct: 118 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 171
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 12/110 (10%)
Query: 119 ILKLIGCCLETPIPIL-AFESVEYGNLRDRILSASQPQTEPLLMKHRLKI-AMDIAHALA 176
L + CC +TP + E V G+L I + + + R + A +I AL
Sbjct: 85 FLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR------FDEARARFYAAEIISALM 138
Query: 177 YLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKC 225
+LH + I+YRD K ++L + E K+ DF + I G T+ C
Sbjct: 139 FLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFC 185
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 44/108 (40%), Gaps = 7/108 (6%)
Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
I I Q H++K G + + E G++ D I ++ TE +
Sbjct: 72 IKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIAT-- 129
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L YLHF ++RD K +IL N E AK+ DF ++
Sbjct: 130 --ILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVA 172
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G L D + + L + + +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIV-MEYMSKGCLLDFLKGE---MGKYLRLPQLVDMAAQIA 124
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 7/100 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++ H+ +++L E PI I+ E + G L D + + L + + +A IA
Sbjct: 69 KLRHEKLVQLYAVVSEEPIYIVT-EYMSKGCLLDFLKGE---MGKYLRLPQLVDMAAQIA 124
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+AY+ V+RD + A+IL E V K+ DF L+
Sbjct: 125 SGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLA 161
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 62/142 (43%), Gaps = 15/142 (10%)
Query: 78 LYKGFW------QERLISVMRFRESNRDGHGSCINNIVYA-AQMSHDHILKLIGCCLETP 130
+YKG W + +++ RE+ I + Y A + ++ +L+G CL +
Sbjct: 33 VYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTST 92
Query: 131 IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRD 190
+ ++ + + YG L D + + L + L M IA ++YL +V+RD
Sbjct: 93 VQLVT-QLMPYGCLLDHV----RENRGRLGSQDLLNWCMQIAKGMSYLE---DVRLVHRD 144
Query: 191 FKTAHILFNEENVAKMFDFSLS 212
++L N K+ DF L+
Sbjct: 145 LAARNVLVKSPNHVKITDFGLA 166
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G ++ ++ E +E G+L D L Q + + L+ I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GI 156
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + YL G+ V+RD +IL N V K+ DF L+
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLA 194
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKC 225
+I AL YLH R +VYRD K +++ +++ K+ DF L I +G T C
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC 166
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKCLKS 228
+I AL YLH R +VYRD K +++ +++ K+ DF L I +G T C
Sbjct: 113 EIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTP 169
Query: 229 E 229
E
Sbjct: 170 E 170
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 33.1 bits (74), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ + +I+++IG C E +L E E G L + Q + K+ +++ ++
Sbjct: 62 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVS 115
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ YL V+RD ++L ++ AK+ DF LS ++
Sbjct: 116 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 155
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
Query: 110 YAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAM 169
YAA + + +K + + + E E G L D I S + Q ++
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR----DEYWRLFR 123
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I AL+Y+H + I++RD K +I +E K+ DF L+
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP---QTEPLLMKHRLKIA 168
++++H +I++ IG L++ + E + G+L+ L ++P Q L M L +A
Sbjct: 89 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS-FLRETRPRPSQPSSLAMLDLLHVA 147
Query: 169 MDIAHALAYL---HFGFPRPIVYRDFKTAHILFN---EENVAKMFDFSLSISI 215
DIA YL HF ++RD + L VAK+ DF ++ I
Sbjct: 148 RDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 194
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 108 IVYAAQMSHDHILKLIGCCLETPIP---ILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
I ++ H +++KL+ L+ P + FE V G + + P +PL
Sbjct: 87 IAILKKLDHPNVVKLVEV-LDDPNEDHLYMVFELVNQGPVMEV------PTLKPLSEDQA 139
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
D+ + YLH+ + I++RD K +++L E+ K+ DF +S
Sbjct: 140 RFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVS 184
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ + +I+++IG C E +L E E G L + Q + K+ +++ ++
Sbjct: 64 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVS 117
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ YL V+RD ++L ++ AK+ DF LS ++
Sbjct: 118 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 157
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 16/113 (14%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP---QTEPLLMKHRLKIA 168
++++H +I++ IG L++ + E + G+L+ L ++P Q L M L +A
Sbjct: 103 SKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKS-FLRETRPRPSQPSSLAMLDLLHVA 161
Query: 169 MDIAHALAYL---HFGFPRPIVYRDFKTAHILF---NEENVAKMFDFSLSISI 215
DIA YL HF ++RD + L VAK+ DF ++ I
Sbjct: 162 RDIACGCQYLEENHF------IHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 208
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 48/111 (43%), Gaps = 14/111 (12%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP-----------QTEPLLMKHR 164
H++I+ L+G C ++ E YG+L + + P E L +
Sbjct: 109 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDL 168
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
L + +A +A+L + ++RD ++L +VAK+ DF L+ I
Sbjct: 169 LHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 216
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ + +I+++IG C E +L E E G L + Q + K+ +++ ++
Sbjct: 68 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVS 121
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ YL V+RD ++L ++ AK+ DF LS ++
Sbjct: 122 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 19/116 (16%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLM--KHRLKIAMDIAH 173
H HI+ LI + L F+ + G L D + TE + + K I +
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL-------TEKVALSEKETRSIMRSLLE 211
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG-------GTSG 222
A+++LH IV+RD K +IL ++ ++ DF S + G GT G
Sbjct: 212 AVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPG 264
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G ++ ++ E +E G+L D L Q + + L+ I
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLR---GI 156
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A + YL G+ V+RD +IL N V K+ DF L
Sbjct: 157 ASGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLG 194
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ + +I+++IG C E +L E E G L + Q + K+ +++ ++
Sbjct: 74 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVS 127
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ YL V+RD ++L ++ AK+ DF LS ++
Sbjct: 128 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 21/118 (17%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNLRD------------RILSASQPQT------E 157
H++I+ L+G C ++ E YG+L + + P+
Sbjct: 94 HENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGR 153
Query: 158 PLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
PL ++ L + +A +A+L + ++RD ++L +VAK+ DF L+ I
Sbjct: 154 PLELRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNGHVAKIGDFGLARDI 208
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ + +I+++IG C E +L E E G L + Q + K+ +++ ++
Sbjct: 68 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVS 121
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ YL V+RD ++L ++ AK+ DF LS ++
Sbjct: 122 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 9/48 (18%)
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L + +D H+L I+YRD K +IL +EE K+ DF LS
Sbjct: 139 LALGLDHLHSLG---------IIYRDLKPENILLDEEGHIKLTDFGLS 177
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 162
Query: 230 RTEIC 234
RTE+C
Sbjct: 163 RTELC 167
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 157 EPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS 214
EP+ H+ + + + YLH G +++RD K ++IL N E K+ DF LS S
Sbjct: 107 EPV---HKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFGLSRS 158
>pdb|3R5S|A Chain A, Crystal Structure Of Apo-Viup
Length = 305
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 101 HGSCINNIVYAAQMSHDHILKLIGCCLETPIP 132
HG + N V AQ +H +L+ +G LE P P
Sbjct: 171 HGPGVVNAVAKAQSAHAQLLQSVGVVLEEPDP 202
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ + +I+++IG C E +L E E G L + Q + K+ +++ ++
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVS 137
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ YL V+RD ++L ++ AK+ DF LS ++
Sbjct: 138 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ + +I+++IG C E +L E E G L + Q + K+ +++ ++
Sbjct: 84 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVS 137
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ YL V+RD ++L ++ AK+ DF LS ++
Sbjct: 138 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ + +I+++IG C E +L E E G L + Q + K+ +++ ++
Sbjct: 82 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYL-----QQNRHVKDKNIIELVHQVS 135
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ YL V+RD ++L ++ AK+ DF LS ++
Sbjct: 136 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 175
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/122 (19%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 95 ESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP 154
+S R + ++++ + H HI++L+G C + + ++ + + G+L D +
Sbjct: 53 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGA 111
Query: 155 QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS 214
LL L + IA + YL +V+R+ ++L + ++ DF ++
Sbjct: 112 LGPQLL----LNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADL 164
Query: 215 IP 216
+P
Sbjct: 165 LP 166
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I+ L G ++ ++ E +E G+L D L + Q + + L+ I
Sbjct: 78 GQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLR---GI 133
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ + YL G+ V+RD +IL N V K+ DF LS
Sbjct: 134 SAGMKYLSDMGY----VHRDLAARNILINSNLVCKVSDFGLS 171
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
L ++H + + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 188 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 241
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
L ++H + + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 190 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 243
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
L ++H + + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 197 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 250
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 9/113 (7%)
Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
I + + ++ H + ++ GC L L E G+ D + + +PL
Sbjct: 102 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLL----EVHKKPLQEVEI 156
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF-SLSISIP 216
+ LAYLH +++RD K +IL +E + K+ DF S SI P
Sbjct: 157 AAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 206
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 159 LLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
L ++H + + +A + +L R ++RD +IL +E+NV K+ DF L+ I
Sbjct: 195 LTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDI 248
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/122 (19%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Query: 95 ESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQP 154
+S R + ++++ + H HI++L+G C + + ++ + + G+L D +
Sbjct: 71 KSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGA 129
Query: 155 QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS 214
LL L + IA + YL +V+R+ ++L + ++ DF ++
Sbjct: 130 LGPQLL----LNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADL 182
Query: 215 IP 216
+P
Sbjct: 183 LP 184
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ + +I+++IG C E +L E E G L + Q + K+ +++ ++
Sbjct: 427 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-----QNRHVKDKNIIELVHQVS 480
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ YL V+RD ++L ++ AK+ DF LS ++
Sbjct: 481 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 520
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 8/112 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
++H +I+KL L E G + D +++ + + + K R I
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVS 125
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
A+ Y H + IV+RD K ++L + + K+ DF S GG A C
Sbjct: 126 AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFC 174
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 9/113 (7%)
Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
I + + ++ H + ++ GC L L E G+ D + +P E +
Sbjct: 63 IKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYC-LGSASDLLEVHKKPLQEVEIAA-- 119
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF-SLSISIP 216
+ LAYLH +++RD K +IL +E + K+ DF S SI P
Sbjct: 120 --VTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ + +I+++IG C E +L E E G L + Q + K+ +++ ++
Sbjct: 426 QLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ-----QNRHVKDKNIIELVHQVS 479
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ YL V+RD ++L ++ AK+ DF LS ++
Sbjct: 480 MGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 32.0 bits (71), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 20/126 (15%)
Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIP-------ILAFESVEYGNLRDRILSASQPQTE 157
+ I +++HDH++K++ + + +L ++ L + ++ +
Sbjct: 100 LREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIK 159
Query: 158 PLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL--SISI 215
LL + L + + H+ LH RD K A+ L N++ K+ DF L ++
Sbjct: 160 TLL--YNLLVGVKYVHSAGILH---------RDLKPANCLVNQDCSVKVCDFGLARTVDY 208
Query: 216 PEGGTS 221
PE G S
Sbjct: 209 PENGNS 214
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 31.6 bits (70), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE V+ +L+ + + AS PL L+
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHVDQ-DLK-KFMDASALTGIPLPLI 108
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 109 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 116 HDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHA 174
H HI+KL + TP I + E V G L D I + L K ++ I
Sbjct: 75 HPHIIKLYQV-ISTPSDIFMVMEYVSGGELFDYICKNGR-----LDEKESRRLFQQILSG 128
Query: 175 LAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
+ Y H +V+RD K ++L + AK+ DF LS + +G
Sbjct: 129 VDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 169
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKC 225
+I AL YLH + +VYRD K +++ +++ K+ DF L I +G T C
Sbjct: 259 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC 313
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL 211
A +IA AL YLH IVYRD K +IL + + + DF L
Sbjct: 145 AAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGL 185
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 31.6 bits (70), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 11/131 (8%)
Query: 96 SNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGN-LRDRILSASQP 154
+ D G I Y + H HI+KL I+ E GN L D I+
Sbjct: 53 AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA--GNELFDYIV----- 105
Query: 155 QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS 214
Q + + + + I A+ Y H IV+RD K ++L +E K+ DF LS
Sbjct: 106 QRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 162
Query: 215 IPEGGTSGAKC 225
+ +G C
Sbjct: 163 MTDGNFLKTSC 173
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 31.6 bits (70), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 167
Query: 230 RTEIC 234
RT++C
Sbjct: 168 RTDLC 172
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKC 225
+I AL YLH + +VYRD K +++ +++ K+ DF L I +G T C
Sbjct: 256 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC 310
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 31.6 bits (70), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
++H +I+KL L E G + D +++ + + + K R I
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFR-----QIVS 124
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
A+ Y H F IV+RD K ++L + + K+ DF S G A C
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFC 173
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 163
Query: 230 RTEIC 234
RT++C
Sbjct: 164 RTDLC 168
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 31.2 bits (69), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 11/131 (8%)
Query: 96 SNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGN-LRDRILSASQP 154
+ D G I Y + H HI+KL I+ E GN L D I+
Sbjct: 52 AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA--GNELFDYIV----- 104
Query: 155 QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS 214
Q + + + + I A+ Y H IV+RD K ++L +E K+ DF LS
Sbjct: 105 QRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 161
Query: 215 IPEGGTSGAKC 225
+ +G C
Sbjct: 162 MTDGNFLKTSC 172
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
KIA+ I AL +LH +++RD K +++L N K DF +S
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGIS 184
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+D + AS PL L+
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKD-FMDASALTGIPLPLI 105
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 106 KSYL---FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA 150
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 162
Query: 230 RTEIC 234
RT++C
Sbjct: 163 RTDLC 167
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 162
Query: 230 RTEIC 234
RT++C
Sbjct: 163 RTDLC 167
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 31.2 bits (69), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
I L +LH R I+YRD K ++L +++ ++ D L++ + G T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 58/136 (42%), Gaps = 18/136 (13%)
Query: 93 FRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSAS 152
FR+S+ + N I ++ H++I+ L T L + V G L DRIL
Sbjct: 48 FRDSSLE------NEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERG 101
Query: 153 QPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILF--NEENVAKMF-DF 209
TE K + + A+ YLH IV+RD K ++L+ EEN M DF
Sbjct: 102 V-YTE----KDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDF 153
Query: 210 SLSISIPEGGTSGAKC 225
LS + + G C
Sbjct: 154 GLS-KMEQNGIMSTAC 168
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYG-NLRDRILSASQPQTEPLLMKHRLKIAMDIAHA 174
HD+I+ I L +P F+SV +L + L ++PL ++H +
Sbjct: 112 HDNIIA-IKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRG 170
Query: 175 LAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L Y+H +++RD K +++L NE K+ DF ++
Sbjct: 171 LKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 205
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
I L +LH R I+YRD K ++L +++ ++ D L++ + G T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 31.2 bits (69), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
I L +LH R I+YRD K ++L +++ ++ D L++ + G T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 31.2 bits (69), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
I L +LH R I+YRD K ++L +++ ++ D L++ + G T
Sbjct: 298 IVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT 344
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 31.2 bits (69), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 11/131 (8%)
Query: 96 SNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGN-LRDRILSASQP 154
+ D G I Y + H HI+KL I+ E GN L D I+
Sbjct: 43 AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA--GNELFDYIV----- 95
Query: 155 QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS 214
Q + + + + I A+ Y H IV+RD K ++L +E K+ DF LS
Sbjct: 96 QRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 152
Query: 215 IPEGGTSGAKC 225
+ +G C
Sbjct: 153 MTDGNFLKTSC 163
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 31.2 bits (69), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 5/98 (5%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYG-NLRDRILSASQPQTEPLLMKHRLKIAMDIAHA 174
HD+I+ I L +P F+SV +L + L ++PL ++H +
Sbjct: 113 HDNIIA-IKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRG 171
Query: 175 LAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
L Y+H +++RD K +++L NE K+ DF ++
Sbjct: 172 LKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMA 206
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 48/106 (45%), Gaps = 9/106 (8%)
Query: 106 NNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRL 165
N +V HD+++ + L + E +E G L D I++ ++ E +
Sbjct: 91 NEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIA----- 144
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL 211
+ + + AL+YLH + +++RD K+ IL + K+ DF
Sbjct: 145 TVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGF 187
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 31.2 bits (69), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG 219
I ++ L YLH ++RD K +IL E+ ++ DF +S + GG
Sbjct: 126 ILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 175
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGG 219
I ++ L YLH ++RD K +IL E+ ++ DF +S + GG
Sbjct: 121 ILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGG 170
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + +L+D + AS PL L+
Sbjct: 50 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKD-FMDASALTGIPLPLI 107
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 108 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 30.8 bits (68), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 52/131 (39%), Gaps = 11/131 (8%)
Query: 96 SNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGN-LRDRILSASQP 154
+ D G I Y + H HI+KL I+ E GN L D I+
Sbjct: 47 AKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA--GNELFDYIV----- 99
Query: 155 QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS 214
Q + + + + I A+ Y H IV+RD K ++L +E K+ DF LS
Sbjct: 100 QRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNI 156
Query: 215 IPEGGTSGAKC 225
+ +G C
Sbjct: 157 MTDGNFLKTSC 167
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
++H +I+KL L E G + D +++ + + + K R I
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
A+ Y H F IV+RD K ++L + + K+ DF S G A C
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFC 173
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 30.8 bits (68), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 84 QERLISVMRFRESNRDG--HGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY 141
Q R++++ R R D + I I ++ H +I+ LI L FE +E
Sbjct: 44 QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME- 102
Query: 142 GNLRDRILSASQPQTEPLLMKHRLKIAM-DIAHALAYLHFGFPRPIVYRDFKTAHILFNE 200
+ L + + L ++KI + + +A+ H I++RD K ++L N
Sbjct: 103 -----KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINS 154
Query: 201 ENVAKMFDFSLS 212
+ K+ DF L+
Sbjct: 155 DGALKLADFGLA 166
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 30.8 bits (68), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 84 QERLISVMRFRESNRDG--HGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEY 141
Q R++++ R R D + I I ++ H +I+ LI L FE +E
Sbjct: 44 QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME- 102
Query: 142 GNLRDRILSASQPQTEPLLMKHRLKIAM-DIAHALAYLHFGFPRPIVYRDFKTAHILFNE 200
+ L + + L ++KI + + +A+ H I++RD K ++L N
Sbjct: 103 -----KDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINS 154
Query: 201 ENVAKMFDFSLS 212
+ K+ DF L+
Sbjct: 155 DGALKLADFGLA 166
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
I I A H +I+KL+G + E G + +L + TEP
Sbjct: 64 IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP------ 117
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I + L L+F + I++RD K ++L E ++ DF +S
Sbjct: 118 -QIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS 164
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 116 HDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHA 174
H HI+KL + TP + E V G L D I + + M+ R ++ I A
Sbjct: 70 HPHIIKLYQV-ISTPTDFFMVMEYVSGGELFDYICKHGRVEE----MEAR-RLFQQILSA 123
Query: 175 LAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
+ Y H +V+RD K ++L + AK+ DF LS + +G
Sbjct: 124 VDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 30.8 bits (68), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + +L+D + AS PL L+
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLKD-FMDASALTGIPLPLI 108
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 109 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 30.8 bits (68), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 10/104 (9%)
Query: 116 HDHILKLIGCCLETPIPI-LAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAHA 174
H HI+KL + TP + E V G L D I + + M+ R ++ I A
Sbjct: 70 HPHIIKLYQV-ISTPTDFFMVMEYVSGGELFDYICKHGRVEE----MEAR-RLFQQILSA 123
Query: 175 LAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
+ Y H +V+RD K ++L + AK+ DF LS + +G
Sbjct: 124 VDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG 164
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 30.8 bits (68), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Query: 114 MSHDHILKLIGCCLETP-IPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
++H ++L LIG L +P + + +G+L I S PQ P +K + + +A
Sbjct: 79 LNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRS---PQRNPT-VKDLISFGLQVA 134
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ YL + V+RD + + +E K+ DF L+ I
Sbjct: 135 RGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDI 174
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 30.8 bits (68), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKCLKS 228
+I AL YLH + +VYRD K +++ +++ K+ DF L I +G T C
Sbjct: 117 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP 174
Query: 229 E 229
E
Sbjct: 175 E 175
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 133 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 179
Query: 230 RTEIC 234
RT +C
Sbjct: 180 RTTLC 184
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 30.4 bits (67), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 167
Query: 230 RTEIC 234
RT +C
Sbjct: 168 RTTLC 172
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 30.4 bits (67), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKC 225
+I AL YLH + +VYRD K +++ +++ K+ DF L I +G T C
Sbjct: 116 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC 170
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 167
Query: 230 RTEIC 234
RT +C
Sbjct: 168 RTTLC 172
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 7/108 (6%)
Query: 105 INNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHR 164
I I A H +I+KL+G + E G + +L + TEP
Sbjct: 56 IVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEP------ 109
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I + L L+F + I++RD K ++L E ++ DF +S
Sbjct: 110 -QIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVS 156
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTSGAKCLKS 228
+I AL YLH + +VYRD K +++ +++ K+ DF L I +G T C
Sbjct: 118 EIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTP 175
Query: 229 E 229
E
Sbjct: 176 E 176
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 11/111 (9%)
Query: 106 NNIVYAAQMSHD----HILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLM 161
N I+ Q+ H+ +I+ G + E ++ G+L D++L ++ E +L
Sbjct: 59 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKEAKRIPEEILG 117
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K +++ + LAYL I++RD K ++IL N K+ DF +S
Sbjct: 118 K----VSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVS 162
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 30.4 bits (67), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 165
Query: 230 RTEIC 234
RT +C
Sbjct: 166 RTTLC 170
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 30.4 bits (67), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 167
Query: 230 RTEIC 234
RT +C
Sbjct: 168 RTTLC 172
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 14/119 (11%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q SH +I++L G + ++ E +E G L D+ L + L + L+ I
Sbjct: 101 GQFSHHNIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLR---GI 156
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI---PEG--GTSGAK 224
A + YL + + V+RD +IL N V K+ DF LS + PE TSG K
Sbjct: 157 AAGMKYLANMNY----VHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGK 211
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 30.4 bits (67), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 162
Query: 230 RTEIC 234
RT +C
Sbjct: 163 RTTLC 167
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 30.4 bits (67), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 142 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 188
Query: 230 RTEIC 234
RT +C
Sbjct: 189 RTTLC 193
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 30.4 bits (67), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLET-PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMD 170
Q H +I++L G + P+ IL E +E G L D L + Q + + L+
Sbjct: 70 GQFEHPNIIRLEGVVTNSMPVMILT-EFMENGAL-DSFLRLNDGQFTVIQLVGMLR---G 124
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
IA + YL V+RD +IL N V K+ DF LS
Sbjct: 125 IASGMRYLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLS 163
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 30.4 bits (67), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 166
Query: 230 RTEIC 234
RT +C
Sbjct: 167 RTTLC 171
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP----------SSR 166
Query: 230 RTEIC 234
RT +C
Sbjct: 167 RTTLC 171
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 46/112 (41%), Gaps = 8/112 (7%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
++H +I+KL L E G + D +++ + + + K R I
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFR-----QIVS 122
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
A+ Y H + IV+RD K ++L + + K+ DF S GG C
Sbjct: 123 AVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFC 171
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 162
Query: 230 RTEIC 234
RT +C
Sbjct: 163 RTXLC 167
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G + ++ E +E G+L D L Q + + L+ +
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLR---GV 160
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL G+ V+RD ++L + V K+ DF LS
Sbjct: 161 GAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 165
Query: 230 RTEIC 234
RT +C
Sbjct: 166 RTTLC 170
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE V + +L+ + AS PL L+
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKT-FMDASALTGIPLPLI 104
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 105 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A +I L ++H F +VYRD K A+IL +E ++ D L+
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 338
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 105
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 106 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A +I L ++H F +VYRD K A+IL +E ++ D L+
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I++L G + ++ E +E G+L D L Q + + L+ +
Sbjct: 105 GQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLR---GV 160
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL G+ V+RD ++L + V K+ DF LS
Sbjct: 161 GAGMRYLSDLGY----VHRDLAARNVLVDSNLVCKVSDFGLS 198
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 46/102 (45%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLET-PIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMD 170
Q H +I++L G + P+ IL E +E G L D L + Q + + L+
Sbjct: 72 GQFEHPNIIRLEGVVTNSMPVMILT-EFMENGAL-DSFLRLNDGQFTVIQLVGMLR---G 126
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
IA + YL V+RD +IL N V K+ DF LS
Sbjct: 127 IASGMRYLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLS 165
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
AL YLH I++RD K +ILF + K+ DF +S
Sbjct: 147 ALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A +I L ++H F +VYRD K A+IL +E ++ D L+
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A +I L ++H F +VYRD K A+IL +E ++ D L+
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLA 339
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
AL YLH I++RD K +ILF + K+ DF +S
Sbjct: 147 ALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
AL YLH I++RD K +ILF + K+ DF +S
Sbjct: 147 ALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 113 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 159
Query: 230 RTEIC 234
RT +C
Sbjct: 160 RTTLC 164
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSE 229
++A+AL+Y H + +++RD K ++L K+ DF S+ P S
Sbjct: 115 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP----------SSR 161
Query: 230 RTEIC 234
RT +C
Sbjct: 162 RTTLC 166
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSIS 214
L YLH + I++RD K ++L +E V K+ DF L+ S
Sbjct: 123 QGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKS 161
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 113 QMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIA 172
Q+ + +I++LIG C + +L E G L ++ + E + + + ++ ++
Sbjct: 66 QLDNPYIVRLIGVCQAEAL-MLVMEMAGGGPLHKFLVG----KREEIPVSNVAELLHQVS 120
Query: 173 HALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ YL + V+RD ++L + AK+ DF LS ++
Sbjct: 121 MGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKAL 160
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 50/119 (42%), Gaps = 14/119 (11%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +++ L G ++ E +E G L D L Q + + L+ I
Sbjct: 99 GQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLR---GI 154
Query: 172 AHALAYL-HFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI---PEG--GTSGAK 224
A + YL G+ V+RD +IL N V K+ DF LS I PE T+G K
Sbjct: 155 AAGMRYLADMGY----VHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 30.0 bits (66), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/105 (21%), Positives = 45/105 (42%), Gaps = 8/105 (7%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
+ + H +IL+L G ++ L E G + + S+ + ++
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQ-----RTATYITEL 117
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
A+AL+Y H + +++RD K ++L K+ DF S+ P
Sbjct: 118 ANALSYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K+ + I AL YL +++RD K ++IL +E K+ DF +S
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGIS 172
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 105
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 106 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 106
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 107 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ ALAYLH + +++RD K+ IL + K+ DF I
Sbjct: 150 VLQALAYLH---AQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQI 191
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 106
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 107 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 106
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 107 KSYL---FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 44/103 (42%), Gaps = 7/103 (6%)
Query: 110 YAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAM 169
YAA + + +K + + + E E L D I S + Q ++
Sbjct: 68 YAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR----DEYWRLFR 123
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I AL+Y+H + I++RD K +I +E K+ DF L+
Sbjct: 124 QILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLA 163
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 105
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 106 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 105
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 106 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 104
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 105 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 104
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 105 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 105
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 106 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 3/39 (7%)
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
AL YLH I++RD K +ILF + K+ DF +S
Sbjct: 120 ALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 104
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 105 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 105
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 106 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A+AL+Y H + +++RD K ++L K+ DF S+ P
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 162
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
++H +I+KL L E G + D +++ + + + K R I
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A+ Y H F IV+RD K ++L + + K+ DF S
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
++H +I+KL L E G + D +++ + + + K R I
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A+ Y H F IV+RD K ++L + + K+ DF S
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 105
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 106 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 108
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 109 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 106
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 107 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 151
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 29.6 bits (65), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
++H +I+KL L E G + D +++ + + + K R I
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A+ Y H F IV+RD K ++L + + K+ DF S
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 108
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 109 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 50 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 107
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 108 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
++H +I+KL L E G + D +++ + + + K R I
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 124
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A+ Y H F IV+RD K ++L + + K+ DF S
Sbjct: 125 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 160
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A+AL+Y H + +++RD K ++L K+ DF S+ P
Sbjct: 121 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 164
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 179
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 104
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 105 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 179
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 50 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 107
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 108 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 152
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 55 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 112
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 113 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 105
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 106 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A+AL+Y H + +++RD K ++L K+ DF S+ P
Sbjct: 142 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 185
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 47 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 104
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 105 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 149
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A+AL+Y H + +++RD K ++L K+ DF S+ P
Sbjct: 118 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 161
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 143 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 182
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 179
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 50 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 107
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 108 KSYL---FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA 152
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 52 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 109
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 110 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 52 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 109
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 110 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 154
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A+AL+Y H + +++RD K ++L K+ DF S+ P
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 160
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 55 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 112
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 113 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 157
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 179
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 177
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 180
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 179
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 177
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL 211
A +I+ L +LH R I+YRD K +++ + E K+ DF +
Sbjct: 126 AAEISIGLFFLH---KRGIIYRDLKLDNVMLDSEGHIKIADFGM 166
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 177
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 145 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 184
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 138 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 177
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 141 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 180
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 112 AQMSHDHILKLIGCCLE-TPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMD 170
Q H +++ L G + TP+ I+ E +E G+L D L + Q + + L+
Sbjct: 89 GQFDHPNVIHLEGVVTKSTPVMIIT-EFMENGSL-DSFLRQNDGQFTVIQLVGMLR---G 143
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
IA + YL V+RD +IL N V K+ DF LS
Sbjct: 144 IAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLS 182
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 140 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 179
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS 210
+I AL YLH + I++RD K +IL NE+ ++ DF
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 174
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 9/107 (8%)
Query: 106 NNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRL 165
I +Q +I + G L++ + E + G+ D + + PL +
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL------KPGPLEETYIA 119
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I +I L YLH ++RD K A++L +E+ K+ DF ++
Sbjct: 120 TILREILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVA 163
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 115 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 154
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 118 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 157
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 116 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 155
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 122 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 161
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFS 210
+I AL YLH + I++RD K +IL NE+ ++ DF
Sbjct: 137 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFG 174
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I AL YLH + I++RD K +IL NE+ ++ DF +
Sbjct: 117 EIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTA 156
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 166 KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
++ + + L Y+H I++RD K A++L + V K+ DF L+
Sbjct: 129 RVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A+AL+Y H + +++RD K ++L K+ DF S+ P
Sbjct: 120 ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP 163
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A+AL+Y H + +++RD K ++L K+ DF S+ P
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 162
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ + L Y+H I++RD K A++L + V K+ DF L+
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + +L+ + + AS PL L+
Sbjct: 49 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLK-KFMDASALTGIPLPLI 106
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 107 KSYL---FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA 151
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 106 NNIVYAAQMSHD----HILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLM 161
N I+ Q+ H+ +I+ G + E ++ G+L D++L + E +L
Sbjct: 68 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG 126
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K +++ + L YL I++RD K ++IL N K+ DF +S
Sbjct: 127 K----VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 171
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ + L Y+H I++RD K A++L + V K+ DF L+
Sbjct: 134 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 172
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 29.3 bits (64), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A+AL+Y H + +++RD K ++L K+ DF S+ P
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + +L+ + + AS PL L+
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSM-DLK-KFMDASALTGIPLPLI 108
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 109 KSYL---FQLLQGLAFCH---SHRVLHRDLKPENLLINTEGAIKLADFGLA 153
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 29.3 bits (64), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A+AL+Y H + +++RD K ++L K+ DF S+ P
Sbjct: 119 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 162
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 3/49 (6%)
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
I +I L++LH +++RD K ++L E K+ DF +S +
Sbjct: 134 ICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQL 179
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ + L Y+H I++RD K A++L + V K+ DF L+
Sbjct: 133 LLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFGLA 171
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 28.9 bits (63), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A+AL+Y H + +++RD K ++L K+ DF S+ P
Sbjct: 116 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 159
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE++ K+ DF L+
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA 174
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+I L YLH ++RD K A++L +E+ K+ DF ++
Sbjct: 128 EILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVA 167
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE++ K+ DF L+
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGLA 178
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I +I L YLH ++RD K A++L +E K+ DF ++
Sbjct: 109 ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 28.9 bits (63), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A AL Y H R +++RD K ++L + K+ DF S+ P
Sbjct: 123 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 166
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I +I L YLH ++RD K A++L +E K+ DF ++
Sbjct: 109 ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA 151
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL 211
A +I L +LH + IVYRD K +IL +++ K+ DF +
Sbjct: 124 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGM 164
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A AL Y H R +++RD K ++L + K+ DF S+ P
Sbjct: 122 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 28.5 bits (62), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL 211
A +I L +LH + IVYRD K +IL +++ K+ DF +
Sbjct: 125 AAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGM 165
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL 211
I L Y+H I++RD K +++ NE++ K+ DF L
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDSELKILDFGL 171
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 8/99 (8%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
++H +I+KL L E G + D +++ + + K R I
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFR-----QIVS 117
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A+ Y H F IV+RD K ++L + + K+ DF S
Sbjct: 118 AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFS 153
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 158 PLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
PL I +I L YLH ++RD K A++L +E K+ DF ++
Sbjct: 120 PLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA 171
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I +I L YLH ++RD K A++L +E K+ DF ++
Sbjct: 124 ILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVA 166
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + + AS PL L+
Sbjct: 48 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLK-KFMDASALTGIPLPLI 105
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + L++ H +++RD K ++L N E K+ DF L+
Sbjct: 106 KSYL---FQLLQGLSFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 150
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A AL Y H R +++RD K ++L + K+ DF S+ P
Sbjct: 122 ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAP 165
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 9/111 (8%)
Query: 103 SCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPL-LM 161
+ I I +++H +I+KL+ L FE + + +L+ + AS PL L+
Sbjct: 51 TAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKT-FMDASALTGIPLPLI 108
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K L + LA+ H +++RD K ++L N E K+ DF L+
Sbjct: 109 KSYL---FQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLA 153
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 48/112 (42%), Gaps = 15/112 (13%)
Query: 106 NNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTE---PLLMK 162
N I Q+ H ++++L +L E V+ G L DRI+ S TE L MK
Sbjct: 135 NEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMK 194
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVA--KMFDFSLS 212
I + ++H + I++ D K +IL + K+ DF L+
Sbjct: 195 Q-------ICEGIRHMHQMY---ILHLDLKPENILCVNRDAKQIKIIDFGLA 236
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 28.5 bits (62), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL-SISIPEGGTS 221
H + A +IA L +L + I+YRD K +++ + E K+ DF + +I +G T+
Sbjct: 122 HAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTT 178
Query: 222 GAKC 225
C
Sbjct: 179 KXFC 182
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 145 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA 183
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 28.5 bits (62), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 8/99 (8%)
Query: 114 MSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDIAH 173
++H +I+KL L E G + D +++ + + + K R I
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFR-----QIVS 125
Query: 174 ALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A+ Y H + IV+RD K ++L + + K+ DF S
Sbjct: 126 AVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFS 161
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 163 HRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL 211
H + A +IA L +L + I+YRD K +++ + E K+ DF +
Sbjct: 443 HAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGM 488
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 28.5 bits (62), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 9/56 (16%)
Query: 165 LKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGT 220
+ IA+D H L Y+H RD K +IL + ++ DF + + E GT
Sbjct: 184 MVIAIDSVHQLHYVH---------RDIKPDNILMDMNGHIRLADFGSCLKLMEDGT 230
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 23/139 (16%)
Query: 87 LISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIP--ILAFESVEYGNL 144
L++V + + S D I + D I+K G P L E + G L
Sbjct: 38 LVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCL 97
Query: 145 RDRILSASQPQTEPLLMKHRLKIAMDIAHALAY-------LHFGFPRPIVYRDFKTAHIL 197
RD L +HR + +D + L Y + + R V+RD +IL
Sbjct: 98 RD------------FLQRHRAR--LDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNIL 143
Query: 198 FNEENVAKMFDFSLSISIP 216
E K+ DF L+ +P
Sbjct: 144 VESEAHVKIADFGLAKLLP 162
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 106 NNIVYAAQMSHD----HILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLM 161
N I+ Q+ H+ +I+ G + E ++ G+L D++L + E +L
Sbjct: 76 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG 134
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K +++ + L YL I++RD K ++IL N K+ DF +S
Sbjct: 135 K----VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 179
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 163 HRLKIAM-DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSL--SISIP 216
H +K+ + + LAY H + +++RD K ++L NE K+ DF L + SIP
Sbjct: 100 HNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 153
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 28.1 bits (61), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA 177
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA 177
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDXELKILDFGLA 172
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 155 QTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+++ L +H + + L Y+H I++RD K +++ NE++ ++ DF L+
Sbjct: 124 KSQALSDEHVQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 28.1 bits (61), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/51 (25%), Positives = 27/51 (52%), Gaps = 3/51 (5%)
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+H + + L Y+H I++RD K +++ NE++ ++ DF L+
Sbjct: 131 EHVQFLVYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDSELRILDFGLA 178
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 106 NNIVYAAQMSHD----HILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLM 161
N I+ Q+ H+ +I+ G + E ++ G+L D++L + E +L
Sbjct: 52 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG 110
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K +++ + L YL I++RD K ++IL N K+ DF +S
Sbjct: 111 K----VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 155
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 106 NNIVYAAQMSHD----HILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLM 161
N I+ Q+ H+ +I+ G + E ++ G+L D++L + E +L
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG 107
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K +++ + L YL I++RD K ++IL N K+ DF +S
Sbjct: 108 K----VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 106 NNIVYAAQMSHD----HILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLM 161
N I+ Q+ H+ +I+ G + E ++ G+L D++L + E +L
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG 107
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K +++ + L YL I++RD K ++IL N K+ DF +S
Sbjct: 108 K----VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 27.7 bits (60), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 116 HDHILKLIGCCLETPIP-----ILAFESVEYGNLRDRILSASQP----QTEPLLMKHRLK 166
H ++++L+ C + L FE V+ +LR + A P +T LM+ L+
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+D HA IV+RD K +IL K+ DF L+
Sbjct: 124 -GLDFLHANC---------IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 27.7 bits (60), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)
Query: 160 LMKHRLKIAMDIAHALAY-----LHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
LMKH K+ D L Y L + I++RD K ++ NE+ K+ DF L+
Sbjct: 119 LMKHE-KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLA 175
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 27.7 bits (60), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 116 HDHILKLIGCCLETPIP-----ILAFESVEYGNLRDRILSASQP----QTEPLLMKHRLK 166
H ++++L+ C + L FE V+ +LR + A P +T LM+ L+
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+D HA IV+RD K +IL K+ DF L+
Sbjct: 124 -GLDFLHANC---------IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 27.7 bits (60), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 170 DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIP 216
++A+AL+Y H + +++RD K ++L K+ DF S P
Sbjct: 117 ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAP 160
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 27.7 bits (60), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 116 HDHILKLIGCCLETPIP-----ILAFESVEYGNLRDRILSASQP----QTEPLLMKHRLK 166
H ++++L+ C + L FE V+ +LR + A P +T LM+ L+
Sbjct: 73 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 131
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+D HA IV+RD K +IL K+ DF L+
Sbjct: 132 -GLDFLHANC---------IVHRDLKPENILVTSGGTVKLADFGLA 167
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 27.7 bits (60), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 162 KHRLKIAM-DIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+H ++I + +I AL +LH I+YRD K +IL + + DF LS
Sbjct: 158 EHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLS 206
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 46/106 (43%), Gaps = 20/106 (18%)
Query: 116 HDHILKLIGCCLETPIP-----ILAFESVEYGNLRDRILSASQP----QTEPLLMKHRLK 166
H ++++L+ C + L FE V+ +LR + A P +T LM+ L+
Sbjct: 65 HPNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 167 IAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+D HA IV+RD K +IL K+ DF L+
Sbjct: 124 -GLDFLHANC---------IVHRDLKPENILVTSGGTVKLADFGLA 159
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 184
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 27.3 bits (59), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 184
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRDRI---LSASQPQTEPLLMKHRLKIAMDI 171
H +I++L L F+ ++ G L D + ++ S+ +T ++ + +++
Sbjct: 69 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM-----RALLEV 123
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
AL L+ IV+RD K +IL +++ K+ DF S + G
Sbjct: 124 ICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 164
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 146 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 184
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 27.3 bits (59), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Query: 186 IVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVREN 239
+++RD K ++ NE+ K+ DF L+ + G ER ++ C N
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---------ERKKVLCGTPN 206
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 192
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 106 NNIVYAAQMSHD----HILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLM 161
N I+ Q+ H+ +I+ G + E ++ G+L D++L + E +L
Sbjct: 111 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG 169
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K +++ + L YL I++RD K ++IL N K+ DF +S
Sbjct: 170 K----VSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVS 214
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 145 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 183
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 86 RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLR 145
+L++V + + N +V H++++++ L + E +E G L
Sbjct: 50 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 109
Query: 146 DRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAK 205
D I++ ++ E + + + + AL+ LH + +++RD K+ IL + K
Sbjct: 110 D-IVTHTRMNEEQIA-----AVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 160
Query: 206 MFDFSL 211
+ DF
Sbjct: 161 LSDFGF 166
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 157 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 195
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 27.3 bits (59), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 174
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 192
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 27.3 bits (59), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 153 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 191
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 27.3 bits (59), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Query: 186 IVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVREN 239
+++RD K ++ NE+ K+ DF L+ + G ER ++ C N
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---------ERKKVLCGTPN 204
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 106 NNIVYAAQMSHD----HILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLM 161
N I+ Q+ H+ +I+ G + E ++ G+L D++L + E +L
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG 107
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K +++ + L YL I++RD K ++IL N K+ DF +S
Sbjct: 108 K----VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 56/134 (41%), Gaps = 27/134 (20%)
Query: 90 VMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRIL 149
++RFR N G IN+I+ A + + ++ +ET + Y L+ + L
Sbjct: 75 LLRFRHENIIG----INDIIRAPTIEQMKDVYIVQDLMETDL---------YKLLKTQHL 121
Query: 150 SASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDF 209
S H I L Y+H +++RD K +++L N K+ DF
Sbjct: 122 SND----------HICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTXDLKIXDF 168
Query: 210 SLS-ISIPEGGTSG 222
L+ ++ P+ +G
Sbjct: 169 GLARVADPDHDHTG 182
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 178
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 174
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 106 NNIVYAAQMSHD----HILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLM 161
N I+ Q+ H+ +I+ G + E ++ G+L D++L + E +L
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG 107
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K +++ + L YL I++RD K ++IL N K+ DF +S
Sbjct: 108 K----VSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 27.3 bits (59), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 136 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 174
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 154 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 192
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 86 RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLR 145
+L++V + + N +V H++++++ L + E +E G L
Sbjct: 57 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 116
Query: 146 DRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAK 205
D I++ ++ E + + + + AL+ LH + +++RD K+ IL + K
Sbjct: 117 D-IVTHTRMNEEQIA-----AVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 167
Query: 206 MFDFSL 211
+ DF
Sbjct: 168 LSDFGF 173
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 177
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 157 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 195
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 133 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 171
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 86 RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLR 145
+L++V + + N +V H++++++ L + E +E G L
Sbjct: 46 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105
Query: 146 DRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAK 205
D I++ ++ E + + + + AL+ LH + +++RD K+ IL + K
Sbjct: 106 D-IVTHTRMNEEQIA-----AVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 156
Query: 206 MFDFSL 211
+ DF
Sbjct: 157 LSDFGF 162
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 27.3 bits (59), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 141 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 179
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I+ L G + ++ E +E G+L D L + + + + L+ I
Sbjct: 70 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLR---GI 125
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL V+RD +IL N V K+ DF +S
Sbjct: 126 GSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMS 163
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 11/111 (9%)
Query: 106 NNIVYAAQMSHD----HILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLM 161
N I+ Q+ H+ +I+ G + E ++ G+L D++L + E +L
Sbjct: 49 NQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSL-DQVLKKAGRIPEQILG 107
Query: 162 KHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
K +++ + L YL I++RD K ++IL N K+ DF +S
Sbjct: 108 K----VSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVS 152
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 27.3 bits (59), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 153 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 191
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 27.3 bits (59), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 14/114 (12%)
Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRDRI---LSASQPQTEPLLMKHRLKIAMDI 171
H +I++L L F+ ++ G L D + ++ S+ +T ++ + +++
Sbjct: 82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM-----RALLEV 136
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKC 225
AL L+ IV+RD K +IL +++ K+ DF S + G + C
Sbjct: 137 ICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC 184
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 27.3 bits (59), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 27.3 bits (59), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 131 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 169
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 27.3 bits (59), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 27.3 bits (59), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 27.3 bits (59), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 163 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 201
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 27.3 bits (59), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 144 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 182
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 27.3 bits (59), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 14/107 (13%)
Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNLRDRI---LSASQPQTEPLLMKHRLKIAMDI 171
H +I++L L F+ ++ G L D + ++ S+ +T ++ + +++
Sbjct: 82 GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM-----RALLEV 136
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISIPEG 218
AL L+ IV+RD K +IL +++ K+ DF S + G
Sbjct: 137 ICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG 177
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 131 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 169
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 48/116 (41%), Gaps = 22/116 (18%)
Query: 116 HDHILKLIGCCLETPIPILAFESVEYGNL-------RDRILSASQPQTEPLLMKHRL--- 165
H +I+ L+G C ++ E YG+L RD + + +T P +M+
Sbjct: 86 HMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS---KTSPAIMEDDELAL 142
Query: 166 ------KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A +A+L + ++RD +IL + K+ DF L+ I
Sbjct: 143 DLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDI 195
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 22/117 (18%)
Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNL-------RDRILSASQPQTEPLLMKHRL-- 165
+H +I+ L+G C ++ E YG+L RD + + +T P +M+
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS---KTSPAIMEDDELA 157
Query: 166 -------KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A +A+L + ++RD +IL + K+ DF L+ I
Sbjct: 158 LDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDI 211
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 139 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 177
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I+ L G + ++ E +E G+L D L + + + + L+ I
Sbjct: 64 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLR---GI 119
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL V+RD +IL N V K+ DF +S
Sbjct: 120 GSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMS 157
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 132 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 170
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 27.3 bits (59), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 86 RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLR 145
+L++V + + N +V H++++++ L + E +E G L
Sbjct: 55 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 114
Query: 146 DRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAK 205
D I++ ++ E + + + + AL+ LH + +++RD K+ IL + K
Sbjct: 115 D-IVTHTRMNEEQIA-----AVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 165
Query: 206 MFDFSL 211
+ DF
Sbjct: 166 LSDFGF 171
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 27.3 bits (59), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 134 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 172
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 27.3 bits (59), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 26.9 bits (58), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 25/54 (46%), Gaps = 9/54 (16%)
Query: 186 IVYRDFKTAHILFNEENVAKMFDFSLSISIPEGGTSGAKCLKSERTEICCVREN 239
+++RD K ++ NE+ K+ DF L+ + G ER ++ C N
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---------ERKKVLCGTPN 180
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 22/117 (18%)
Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNL-------RDRILSASQPQTEPLLMKHRL-- 165
+H +I+ L+G C ++ E YG+L RD + + +T P +M+
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS---KTSPAIMEDDELA 159
Query: 166 -------KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A +A+L + ++RD +IL + K+ DF L+ I
Sbjct: 160 LDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDI 213
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 26.9 bits (58), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 26.9 bits (58), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 26/117 (22%), Positives = 49/117 (41%), Gaps = 22/117 (18%)
Query: 115 SHDHILKLIGCCLETPIPILAFESVEYGNL-------RDRILSASQPQTEPLLMKHRL-- 165
+H +I+ L+G C ++ E YG+L RD + + +T P +M+
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICS---KTSPAIMEDDELA 164
Query: 166 -------KIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLSISI 215
+ +A +A+L + ++RD +IL + K+ DF L+ I
Sbjct: 165 LDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILLTHGRITKICDFGLARDI 218
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Query: 168 AMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
A I YLH ++YRD K +++ +++ K+ DF L+
Sbjct: 147 AAQIVLTFEYLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLA 188
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 25/126 (19%), Positives = 55/126 (43%), Gaps = 9/126 (7%)
Query: 86 RLISVMRFRESNRDGHGSCINNIVYAAQMSHDHILKLIGCCLETPIPILAFESVEYGNLR 145
+L++V + + N +V H++++++ L + E +E G L
Sbjct: 100 KLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 159
Query: 146 DRILSASQPQTEPLLMKHRLKIAMDIAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAK 205
D I++ ++ E + + + + AL+ LH + +++RD K+ IL + K
Sbjct: 160 D-IVTHTRMNEEQIA-----AVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVK 210
Query: 206 MFDFSL 211
+ DF
Sbjct: 211 LSDFGF 216
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 7/101 (6%)
Query: 112 AQMSHDHILKLIGCCLETPIPILAFESVEYGNLRDRILSASQPQTEPLLMKHRLKIAMDI 171
Q H +I+ L G + ++ E +E G+L D L + + + + L+ I
Sbjct: 85 GQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL-DAFLRKNDGRFTVIQLVGMLR---GI 140
Query: 172 AHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
+ YL V+RD +IL N V K+ DF +S
Sbjct: 141 GSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMS 178
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 168
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 140 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 178
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 26.9 bits (58), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Query: 171 IAHALAYLHFGFPRPIVYRDFKTAHILFNEENVAKMFDFSLS 212
I L Y+H I++RD K +++ NE+ K+ DF L+
Sbjct: 130 ILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFGLA 168
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,975,883
Number of Sequences: 62578
Number of extensions: 278064
Number of successful extensions: 1568
Number of sequences better than 100.0: 658
Number of HSP's better than 100.0 without gapping: 207
Number of HSP's successfully gapped in prelim test: 451
Number of HSP's that attempted gapping in prelim test: 1107
Number of HSP's gapped (non-prelim): 717
length of query: 241
length of database: 14,973,337
effective HSP length: 96
effective length of query: 145
effective length of database: 8,965,849
effective search space: 1300048105
effective search space used: 1300048105
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 50 (23.9 bits)