BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026217
(241 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From
Nicotiana Tabacum
pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond
Reductase From Nicotiana Tabacum
pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double
Bond Reductase From Nicotiana Tabacum
Length = 351
Score = 404 bits (1039), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/242 (80%), Positives = 220/242 (90%), Gaps = 1/242 (0%)
Query: 1 MTGWEEYSLVTAPR-LFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
MTGWEEYS++T + LFKI D+PLSYYTGILGMPGMTAYAGF EVCSPK+GE VFVSA
Sbjct: 102 MTGWEEYSIITPTQTLFKIHDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSA 161
Query: 60 ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
ASGAVGQLVGQFAK++GCYVVGSAGSK+KVDLLK+KFGFDEAFNYKEE DL AALKRYFP
Sbjct: 162 ASGAVGQLVGQFAKMLGCYVVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFP 221
Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 179
+GI+IYFENVGGKMLDAVL+NM++ GRI +CGMISQYN ++ EGVHNL CLI+KRIRMEG
Sbjct: 222 DGIDIYFENVGGKMLDAVLVNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEG 281
Query: 180 FLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEVA 239
FLV DY+HLYPK+LEM+IP+IK GK+VYVED A GLESAP ALVGLFSGRN+GKQVV V+
Sbjct: 282 FLVFDYYHLYPKYLEMVIPQIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVS 341
Query: 240 TE 241
E
Sbjct: 342 RE 343
>pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3H|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Apo Form
pdb|2J3I|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3I|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Binary Complex
pdb|2J3J|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3J|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex I
pdb|2J3K|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
pdb|2J3K|B Chain B, Crystal Structure Of Arabidopsis Thaliana Double Bond
Reductase (At5g16970)-Ternary Complex Ii
Length = 345
Score = 366 bits (939), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/243 (72%), Positives = 206/243 (84%), Gaps = 2/243 (0%)
Query: 1 MTGWEEYSLVT--APRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS 58
+ WEEYS++T FKIQHTD+PLSYYTG+LGMPGMTAYAGF+EVCSPK+GE V+VS
Sbjct: 103 IVAWEEYSVITPMTHAHFKIQHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVS 162
Query: 59 AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
AASGAVGQLVGQ AK++GCYVVGSAGSK+KVDLLK KFGFD+AFNYKEE DL AALKR F
Sbjct: 163 AASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCF 222
Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKRIRME 178
P GI+IYFENVGGKMLDAVL+NM + GRI +CGMISQYN + EGVHNL+ +I KR R++
Sbjct: 223 PNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQ 282
Query: 179 GFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
GF+V D++ Y KFLE ++P I+EGKI YVED A+GLE AP ALVGLF G+NVGKQVV V
Sbjct: 283 GFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVV 342
Query: 239 ATE 241
A E
Sbjct: 343 ARE 345
>pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7C|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|B Chain B, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|C Chain C, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|D Chain D, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|E Chain E, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|F Chain F, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|G Chain G, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|H Chain H, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|I Chain I, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|J Chain J, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|K Chain K, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa.
pdb|4B7X|L Chain L, Crystal Structure Of Hypothetical Protein Pa1648 From
Pseudomonas Aeruginosa
Length = 336
Score = 200 bits (508), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 109/237 (45%), Positives = 144/237 (60%), Gaps = 2/237 (0%)
Query: 3 GWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASG 62
G ++Y + +K+ + PL Y LGM GMTAY +V PK GE V +S A+G
Sbjct: 101 GVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFALLDVGQPKNGETVVISGAAG 160
Query: 63 AVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGI 122
AVG + GQ A+L GC VVG AG +K L + GFD A +YK E DL A LKR P+GI
Sbjct: 161 AVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNE-DLAAGLKRECPKGI 219
Query: 123 NIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP-EGVHNLTCLISKRIRMEGFL 181
+++F+NVGG++LD VL + + RI LCG ISQYNN + G N L+ R RMEG +
Sbjct: 220 DVFFDNVGGEILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMV 279
Query: 182 VPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
V DY +P+ L+ M + EGK+ ED EGLE+ P L+ LFSG N GK V++V
Sbjct: 280 VMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV 336
>pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3T|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
pdb|1V3U|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3U|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase In
Apo Form
pdb|1V3V|A Chain A, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|1V3V|B Chain B, Crystal Structure Of Leukotriene B4 12-
Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase
Complexed With Nadp And 15-Oxo-Pge2
pdb|2DM6|A Chain A, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
pdb|2DM6|B Chain B, Crystal Structure Of Anti-Configuration Of Indomethacin
And Leukotriene B4 12-Hydroxydehydrogenase15-Oxo-
Prostaglandin 13-Reductase Complex
Length = 333
Score = 183 bits (465), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 108/241 (44%), Positives = 149/241 (61%), Gaps = 8/241 (3%)
Query: 2 TGWEEYSLVTAPRLFKI---QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVS 58
+GW + + L K+ +PLS G +GMPG+TAY G EVC K GE V VS
Sbjct: 93 SGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVS 152
Query: 59 AASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
AA+GAVG +VGQ AKL GC VVG+AGS +K+ LK + GFD AFNYK L+ ALK+
Sbjct: 153 AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKAS 211
Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYN--NDKPEGVHNLTCLISKRIR 176
P+G + YF+NVGG+ L+ VL M+ G+I +CG IS YN + P G + +I K++R
Sbjct: 212 PDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPG-PSPESIIYKQLR 270
Query: 177 MEGFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQV 235
+EGF+V + + K L ++ + EGKI Y E +G E+ PAA + + +G N+GK V
Sbjct: 271 IEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAV 330
Query: 236 V 236
V
Sbjct: 331 V 331
>pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|B Chain B, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|C Chain C, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
pdb|2Y05|D Chain D, Crystal Structure Of Human Leukotriene B4
12-Hydroxydehydrogenase In Complex With Nadp And
Raloxifene
Length = 328
Score = 174 bits (441), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/240 (42%), Positives = 141/240 (58%), Gaps = 6/240 (2%)
Query: 3 GWEEYSLVTAPRLFKI---QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
GW +S+ L K+ +PLS G +GMPG+TAY G E+C K GE V V+A
Sbjct: 89 GWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNA 148
Query: 60 ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
A+GAVG +VGQ AKL GC VVG+ GS +KV L+ K GFD FNYK L+ LK+ P
Sbjct: 149 AAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASP 207
Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLT-CLISKRIRME 178
+G + YF+NVGG+ + V+ M+ GRI +CG IS YN P +I + +RME
Sbjct: 208 DGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRME 267
Query: 179 GFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 237
F+V + K L+ ++ + EGKI Y E EG E+ PAA +G+ G N+GK +V+
Sbjct: 268 AFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK 327
>pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|B Chain B, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|C Chain C, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
pdb|1ZSV|D Chain D, Crystal Structure Of Human Nadp-Dependent Leukotriene B4
12- Hydroxydehydrogenase
Length = 349
Score = 174 bits (441), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/240 (42%), Positives = 141/240 (58%), Gaps = 6/240 (2%)
Query: 3 GWEEYSLVTAPRLFKI---QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
GW +S+ L K+ +PLS G +GMPG+TAY G E+C K GE V V+A
Sbjct: 110 GWTTHSISDGKDLEKLLTEWPDTIPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNA 169
Query: 60 ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
A+GAVG +VGQ AKL GC VVG+ GS +KV L+ K GFD FNYK L+ LK+ P
Sbjct: 170 AAGAVGSVVGQIAKLKGCKVVGAVGSDEKVAYLQ-KLGFDVVFNYKTVESLEETLKKASP 228
Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLT-CLISKRIRME 178
+G + YF+NVGG+ + V+ M+ GRI +CG IS YN P +I + +RME
Sbjct: 229 DGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRME 288
Query: 179 GFLVPDYF-HLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQVVE 237
F+V + K L+ ++ + EGKI Y E EG E+ PAA +G+ G N+GK +V+
Sbjct: 289 AFVVYRWQGDARQKALKDLLKWVLEGKIQYKEYIIEGFENMPAAFMGMLKGDNLGKTIVK 348
>pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
18beta-Glycyrrhetinic Acid
pdb|2VNA|A Chain A, Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (
Zadh1)
pdb|2W98|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
pdb|2W98|B Chain B, Crystal Structure Of Human Zinc-Binding Alcohol
Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And
Phenylbutazone
Length = 357
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 130/252 (51%), Gaps = 20/252 (7%)
Query: 4 WEEYSLVTAPRLFKI--QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQG--EYVFVSA 59
W+ ++ L K+ Q D LSY+ G +GMPG+T+ G E G + + VS
Sbjct: 104 WQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSG 163
Query: 60 ASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
A+GA G + GQ +GC VVG G+ +K LL ++ GFD A NYK++ ++ L+
Sbjct: 164 AAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESC 222
Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP---------EGVHNLTC 169
P G+++YF+NVGG + D V+ M I LCG ISQYN D P E +
Sbjct: 223 PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQK--- 279
Query: 170 LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR 229
+ I E FLV +Y + + + KEGK+ E GLE+ AA + +G
Sbjct: 280 --ERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGG 337
Query: 230 NVGKQVVEVATE 241
N+GKQ+V ++ E
Sbjct: 338 NIGKQIVCISEE 349
>pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And 15-Keto-Pge2
pdb|2ZB7|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph And Nicotinamide
pdb|2ZB8|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadp And Indomethacin
Length = 357
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 130/252 (51%), Gaps = 20/252 (7%)
Query: 4 WEEYSLVTAPRLFKI--QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQG--EYVFVSA 59
W+ ++ L K+ Q D LSY+ G +GMPG+T+ G E G + + VS
Sbjct: 109 WQTKVILDGNSLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSG 168
Query: 60 ASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
A+GA G + GQ +GC VVG G+ +K LL ++ GFD A NYK++ ++ L+
Sbjct: 169 AAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESC 227
Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKP---------EGVHNLTC 169
P G+++YF+NVGG + D V+ M I LCG ISQYN D P E +
Sbjct: 228 PAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQK--- 284
Query: 170 LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGR 229
+ I E FLV +Y + + + KEGK+ E GLE+ AA + +G
Sbjct: 285 --ERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGG 342
Query: 230 NVGKQVVEVATE 241
N+GKQ+V ++ E
Sbjct: 343 NIGKQIVCISEE 354
>pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13-
Reductase In Complex With Nadph
Length = 353
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/247 (35%), Positives = 132/247 (53%), Gaps = 10/247 (4%)
Query: 4 WEEYSLVTAPRLFKI--QHTDMPLSYYTGILGMPGMTAYAGFFEV--CSPKQGEYVFVSA 59
W+ +++ L K+ Q D LSY+ G +GMPG+T+ G E S + + VS
Sbjct: 105 WQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSG 164
Query: 60 ASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
A+GA G L GQ L+GC VVG G+++K L ++ GFD A NYK ++ L+
Sbjct: 165 AAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQLREAC 223
Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKR---- 174
P G+++YF+NVGG + +AV+ M I LCG ISQY+ND P + + R
Sbjct: 224 PGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPYPPPLPPAVEAIRKERN 283
Query: 175 IRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ 234
I E F V +Y + + + KEGK+ E A+GLE+ A + +G NVGKQ
Sbjct: 284 ITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETMAKGLENMGVAFQSMMTGGNVGKQ 343
Query: 235 VVEVATE 241
+V ++ +
Sbjct: 344 IVCISED 350
>pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent
Oxidoreductase From Mus Musculus At 2.10 A Resolution
Length = 363
Score = 126 bits (316), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/247 (34%), Positives = 126/247 (51%), Gaps = 10/247 (4%)
Query: 4 WEEYSLVTAPRLFKI--QHTDMPLSYYTGILGMPGMTAYAGFFEV--CSPKQGEYVFVSA 59
W+ +++ L K+ Q D LSY+ G +G PG+T+ G E S + VS
Sbjct: 115 WQTKAILDGNGLEKVDPQLVDGHLSYFLGAIGXPGLTSLIGVQEKGHISAGSNQTXVVSG 174
Query: 60 ASGAVGQLVGQFAKLVGC-YVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYF 118
A+GA G L GQ L+GC VVG G+++K L ++ GFD A NYK ++ L+
Sbjct: 175 AAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKT-GNVAEQLREAC 233
Query: 119 PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQYNNDKPEGVHNLTCLISKR---- 174
P G+++YF+NVGG + + V+ I LCG ISQYN D P + + R
Sbjct: 234 PGGVDVYFDNVGGDISNTVISQXNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERN 293
Query: 175 IRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAPAALVGLFSGRNVGKQ 234
I E F V +Y + + + KEGK+ E A+GLE+ A +G NVGKQ
Sbjct: 294 ITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETVAKGLENXGVAFQSXXTGGNVGKQ 353
Query: 235 VVEVATE 241
+V ++ +
Sbjct: 354 IVCISED 360
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Query: 36 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
G TAY E+ +G+ V V+AA+G GQ Q +K C+V+G+ S +K LK+
Sbjct: 148 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS- 206
Query: 96 FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
G D NYK EP + LK+ +PEG+++ +E+VGG M D + + +GR+ + G IS
Sbjct: 207 LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 265
Query: 156 YNNDKPEGVHNLTC------LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--- 206
Y P G+ + L+ K ++GF + Y Y + ++ G +V
Sbjct: 266 YQT--PTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 323
Query: 207 -----YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
E + GLES A+ ++ G+N GK VVE+
Sbjct: 324 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 360
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Query: 36 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
G TAY E+ +G+ V V+AA+G GQ Q +K C+V+G+ S +K LK+
Sbjct: 156 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS- 214
Query: 96 FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
G D NYK EP + LK+ +PEG+++ +E+VGG M D + + +GR+ + G IS
Sbjct: 215 LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 273
Query: 156 YNNDKPEGVHNLTC------LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--- 206
Y P G+ + L+ K ++GF + Y Y + ++ G +V
Sbjct: 274 YQT--PTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 331
Query: 207 -----YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
E + GLES A+ ++ G+N GK VVE+
Sbjct: 332 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 368
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 18/217 (8%)
Query: 36 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
G TAY E+ +G+ V V+AA+G GQ Q +K C+V+G+ S +K LK+
Sbjct: 127 GTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS- 185
Query: 96 FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
G D NYK EP + LK+ +PEG+++ +E+VGG M D + + +GR+ + G IS
Sbjct: 186 LGCDRPINYKTEP-VGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISG 244
Query: 156 YNNDKPEGVHNLTC------LISKRIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIV--- 206
Y P G+ + L+ K ++GF + Y Y + ++ G +V
Sbjct: 245 YQT--PTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEV 302
Query: 207 -----YVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
E + GLES A+ ++ G+N GK VVE+
Sbjct: 303 DLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVEL 339
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 75/152 (49%), Gaps = 9/152 (5%)
Query: 3 GWEEYSLVTAPRLFKIQHTDMPLSYYTGI-LGMPGMTAYAGFFEVCSPKQGEYVFVSAAS 61
G+ EY+L ++K+ L + G +G+P TAY K GE V V AS
Sbjct: 124 GYAEYALAADHTVYKLPEK---LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGAS 180
Query: 62 GAVGQLVGQFAKLVGCYVVGSAGSKDKVDL-LKNKFGFDEAFNYKEEPDLDAALKRYFPE 120
G VG Q A+ G ++G+AG+++ + L+N G E FN++E +D +K+Y E
Sbjct: 181 GGVGLAACQIARAYGLKILGTAGTEEGQKIVLQN--GAHEVFNHREVNYID-KIKKYVGE 237
Query: 121 -GINIYFENVGGKMLDAVLLNMRIQGRITLCG 151
GI+I E + L L + GR+ + G
Sbjct: 238 KGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 269
>pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (
Tp53i3,Pig3)
Length = 354
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 37 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
+TA+ V + + G+YV + A VG Q ++ G + +AGS+ K+ + + K
Sbjct: 148 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 206
Query: 97 GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQY 156
G FNYK+E +A LK G+N+ + +GG + + + + GR L G++
Sbjct: 207 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 266
Query: 157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFH---------LYPKFLEMMIPRIK-EG--K 204
+ + P L SK + G L+ L F E ++P EG +
Sbjct: 267 DINGP--------LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQR 318
Query: 205 IVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
++ V D+ + A + + +N+GK V+E+
Sbjct: 319 LLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 352
>pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|B Chain B, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|C Chain C, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|D Chain D, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
pdb|2OBY|E Chain E, Crystal Structure Of Human P53 Inducible Oxidoreductase
(Tp53i3,Pig3)
Length = 338
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 96/214 (44%), Gaps = 21/214 (9%)
Query: 37 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
+TA+ V + + G+YV + A VG Q ++ G + +AGS+ K+ + + K
Sbjct: 132 LTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KL 190
Query: 97 GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQY 156
G FNYK+E +A LK G+N+ + +GG + + + + GR L G++
Sbjct: 191 GAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSYWEKNVNCLALDGRWVLYGLMGGG 250
Query: 157 NNDKPEGVHNLTCLISKRIRMEGFLVPDYFH---------LYPKFLEMMIPRIK-EG--K 204
+ + P L SK + G L+ L F E ++P EG +
Sbjct: 251 DINGP--------LFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQR 302
Query: 205 IVYVEDKAEGLESAPAALVGLFSGRNVGKQVVEV 238
++ V D+ + A + + +N+GK V+E+
Sbjct: 303 LLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 336
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 81/181 (44%), Gaps = 10/181 (5%)
Query: 37 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
+TA+ + + G+ V V AA V Q AKL G V+ +AGS+DK+ K
Sbjct: 152 LTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-AL 210
Query: 97 GFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
G DE NY PD ++R +G + ++ G + V+ GRI + G S
Sbjct: 211 GADETVNYT-HPDWPKEVRRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSG 269
Query: 156 YNNDKPEGVHNLTCLISKRIRMEGFLVPDYFHLYP--KFLEMMIPRIKEGKIVYVEDKAE 213
Y EG + +++ + G + L+P +F+E + G+++ +E AE
Sbjct: 270 Y-----EGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVGQVLPLEAAAE 324
Query: 214 G 214
G
Sbjct: 325 G 325
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 76/155 (49%), Gaps = 3/155 (1%)
Query: 1 MTGWEEYSLVTAPRLFKI-QHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSA 59
+ + + L A +L K+ + D+ + G++ + GMTA + K G+YV + A
Sbjct: 95 LGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLM-LKGMTAQYLLHQTHKVKPGDYVLIHA 153
Query: 60 ASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFP 119
A+G +G ++ +A+ +G V+G+ +++K + + K G NY + + +
Sbjct: 154 AAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQDFAEVVREITGG 212
Query: 120 EGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 154
+G+++ ++++G L L +R +G G S
Sbjct: 213 KGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHAS 247
>pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
pdb|4DUP|B Chain B, Crystal Structure Of A Quinone Oxidoreductase From
Rhizobium Etli Cfn 42
Length = 353
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 84/208 (40%), Gaps = 15/208 (7%)
Query: 38 TAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG 97
T +A F+ +GE V + + +G Q A+ G V +AGS K + + + G
Sbjct: 154 TVWANLFQXAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLG 212
Query: 98 FDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRIT----LCGMI 153
NY+ E D A +K +G++I + +G + + ++ G ++ L G +
Sbjct: 213 AKRGINYRSE-DFAAVIKAETGQGVDIILDXIGAAYFERNIASLAKDGCLSIIAFLGGAV 271
Query: 154 SQYNNDKPEGVHNLTCLISK---RIRMEGFLVPDYFHLYPKFLEMMIPRIKEGKIVYVED 210
++ N P V LT S R E + D L + P ++ G + V
Sbjct: 272 AEKVNLSPIXVKRLTVTGSTXRPRTAEEKRAIRD------DLLSEVWPLLEAGTVAPVIH 325
Query: 211 KAEGLESAPAALVGLFSGRNVGKQVVEV 238
K E A L G +VGK + V
Sbjct: 326 KVFAFEDVADAHRLLEEGSHVGKVXLTV 353
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 27 YYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSK 86
Y G+L + +TA + E K+G+YV + AA+G VG ++ Q K+ G + + A +
Sbjct: 126 YAAGLLQV--LTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTD 183
Query: 87 DKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQG 145
+K+ + K ++G + N +E L LK +G++ F++VG + L ++ +G
Sbjct: 184 EKLKIAK-EYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKG 241
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ8|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase
pdb|2VZ9|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
pdb|2VZ9|B Chain B, Crystal Structure Of Mammalian Fatty Acid Synthase In
Complex With Nadp
Length = 2512
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 86/212 (40%), Gaps = 14/212 (6%)
Query: 38 TAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF- 96
TAY + GE V + + SG VGQ A GC V + GS +K L+ +F
Sbjct: 1654 TAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFP 1713
Query: 97 GFDEAF--NYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 154
DE N ++ L+ +G+++ ++ + L A + + GR G
Sbjct: 1714 QLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFD 1773
Query: 155 QYNNDKPEGVHNL-TCLISKRIRMEGFLVPDYFH----LYPKFLEMMIPRIKEGKIVYVE 209
NN H L + K + G L+ F + + E++ I+EG + ++
Sbjct: 1774 LSNN------HALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLK 1827
Query: 210 DKAEGLESAPAALVGLFSGRNVGKQVVEVATE 241
AA + G+++GK V++V E
Sbjct: 1828 CTVFPRTKVEAAFRYMAQGKHIGKVVIQVREE 1859
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 10/132 (7%)
Query: 2 TGWEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAAS 61
W E ++KI DM S M +TAY FEV + ++G V V +A
Sbjct: 95 NAWAEVVCTPVEFVYKIPD-DMSFSE-AAAFPMNFVTAYVMLFEVANLREGMSVLVHSAG 152
Query: 62 GAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFG--FDEAFNYKEEPDLDAALKRYFP 119
G VGQ V Q V V S K + +K+ FD +Y +E +KR
Sbjct: 153 GGVGQAVAQLCSTVPNVTVFGTASTFKHEAIKDSVTHLFDRNADYVQE------VKRISA 206
Query: 120 EGINIYFENVGG 131
EG++I + + G
Sbjct: 207 EGVDIVLDCLCG 218
>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
pdb|3UOG|B Chain B, Crystal Structure Of Putative Alcohol Dehydrogenase From
Sinorhizobium Meliloti 1021
Length = 363
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 36 GMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNK 95
G+TA+ E + G+ V V +G V Q AK G V+ ++ S++K+D
Sbjct: 174 GLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDR-AFA 231
Query: 96 FGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
G D N EE ++ G + E GG L L + GRI++ G++
Sbjct: 232 LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEG 291
Query: 156 YNNDKPEG 163
+ P G
Sbjct: 292 FEVSGPVG 299
>pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase
pdb|1PQW|B Chain B, Putative Enoyl Reductase Domain Of Polyketide Synthase
Length = 198
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/102 (24%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Query: 33 GMPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLL 92
G+ +TA+ EV GE V + +A+G VG AK++G + +AGS K ++L
Sbjct: 20 GVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML 79
Query: 93 KNKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKML 134
++ G + + + D L+ G+++ ++ G+ +
Sbjct: 80 -SRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAI 120
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 52/102 (50%), Gaps = 2/102 (1%)
Query: 52 GEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLD 111
G +V +S A+G +G L Q+AK +G V+G G + K +L ++ G + ++ +E D+
Sbjct: 170 GHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEVFIDFTKEKDIV 228
Query: 112 AALKRYFPEGIN-IYFENVGGKMLDAVLLNMRIQGRITLCGM 152
A+ + G + + +V ++A +R G L GM
Sbjct: 229 GAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGM 270
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 34 MPGMTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLK 93
+ G+T Y + K E AA+G VG + Q+AK +G ++G+ G+ K
Sbjct: 123 LKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL 182
Query: 94 NKFGFDEAFNYKEEPDLDAALKRYF-PEGINIYFENVG 130
K G + NY+EE DL LK + + + +++VG
Sbjct: 183 -KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVG 218
>pdb|3HZZ|A Chain A, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|B Chain B, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|C Chain C, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
pdb|3HZZ|D Chain D, 2.4 Angstrom Crystal Structure Of Streptomyces Collinus
Crotonyl Coa CarboxylaseREDUCTASE
Length = 467
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 57/144 (39%), Gaps = 23/144 (15%)
Query: 35 PGMTAYAGFFEVCSP-----KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV 89
PG+ + ++ S KQG+ V + ASG +G QFA G + S K
Sbjct: 225 PGLVNSTAYRQLVSRNGAAMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 284
Query: 90 DLLKNKFGFDEAFN--------YKEEPDLDAALKRYF---------PEGINIYFENVGGK 132
++ ++ G + + +K+E D + F E I+I FE+ G +
Sbjct: 285 EICRS-MGAEAIIDRNAEGYKFWKDEHTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE 343
Query: 133 MLDAVLLNMRIQGRITLCGMISQY 156
A + R G IT C S Y
Sbjct: 344 TFGASVYVTRKGGTITTCASTSGY 367
>pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester
Reductase (Cgi- 63)
Length = 357
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 4 WEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGA 63
W ++ + L ++ +D+PL LG+ TAY + + G+ V +A++
Sbjct: 122 WRTEAVFSEEALIQV-PSDIPLQS-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSG 179
Query: 64 VGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL-DAALKRYFPE-- 120
VGQ V Q A +G + + + L ++ A + E +L +K +F +
Sbjct: 180 VGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMP 239
Query: 121 GINIYFENVGGKMLDAVLLNMRIQGR-ITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 179
+ VGGK +L + G +T GM Q V +++ LI K +++ G
Sbjct: 240 QPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQ------PVVASVSLLIFKDLKLRG 293
Query: 180 FLVPDYF--HLYPKFLEMMI 197
F + + H +F E+++
Sbjct: 294 FWLSQWKKDHSPDQFKELIL 313
>pdb|3KRT|A Chain A, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|B Chain B, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|C Chain C, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
pdb|3KRT|D Chain D, Crystal Structure Of Putative Crotonyl Coa Reductase From
Streptomyces Coelicolor A3(2)
Length = 456
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 56/144 (38%), Gaps = 23/144 (15%)
Query: 35 PGMTAYAGFFEVCSP-----KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKV 89
PG+ + ++ S KQG+ V + ASG +G QFA G + S K
Sbjct: 207 PGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA 266
Query: 90 DLLKNKFGFDEAFN--------YKEEPDLDAALKRYF---------PEGINIYFENVGGK 132
++ + G + + +K+E D + F E I+I FE+ G +
Sbjct: 267 EICR-AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE 325
Query: 133 MLDAVLLNMRIQGRITLCGMISQY 156
A + R G IT C S Y
Sbjct: 326 TFGASVFVTRKGGTITTCASTSGY 349
>pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
pdb|2VCY|B Chain B, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human
Fas Ii
Length = 344
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/200 (22%), Positives = 86/200 (43%), Gaps = 14/200 (7%)
Query: 4 WEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGA 63
W ++ + L ++ +D+PL LG+ TAY + + G+ V +A++
Sbjct: 109 WRTEAVFSEEALIQV-PSDIPLQS-AATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSG 166
Query: 64 VGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDL-DAALKRYFPE-- 120
VGQ V Q A +G + + + L ++ A + E +L +K +F +
Sbjct: 167 VGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMP 226
Query: 121 GINIYFENVGGKMLDAVLLNMRIQGR-ITLCGMISQYNNDKPEGVHNLTCLISKRIRMEG 179
+ VGGK +L + G +T GM Q V +++ LI K +++ G
Sbjct: 227 QPRLALNCVGGKSSTELLRQLARGGTMVTYGGMAKQ------PVVASVSLLIFKDLKLRG 280
Query: 180 FLVPDYF--HLYPKFLEMMI 197
F + + H +F E+++
Sbjct: 281 FWLSQWKKDHSPDQFKELIL 300
>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase
pdb|3JYN|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato
Dc3000 Quinone Oxidoreductase Complexed With Nadph
Length = 325
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEE 107
K GE + AA+G VG L Q+AK +G ++G+ S +K K G E +Y E
Sbjct: 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYSHE 195
>pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
pdb|3SLK|B Chain B, Structure Of Ketoreductase And Enoylreductase Didomain
From Modular Polyketide Synthase
Length = 795
Score = 36.6 bits (83), Expect = 0.011, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 55/118 (46%), Gaps = 9/118 (7%)
Query: 37 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK---VDLLK 93
+TAY ++ + GE + V +A+G VG Q A+ +G V +A S+DK V+L +
Sbjct: 331 LTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATA-SEDKWQAVELSR 389
Query: 94 NKFGFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 151
++ E+ L A R G+++ ++ G+ DA L + GR G
Sbjct: 390 EHLASSRTCDF-EQQFLGATGGR----GVDVVLNSLAGEFADASLRMLPRGGRFLELG 442
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/152 (17%), Positives = 66/152 (43%), Gaps = 5/152 (3%)
Query: 4 WEEYSLVTAPRLFKIQHTDMPLSYYTGILGMPGMTAYAGFFEVCSPKQGEYVFVSAASGA 63
W+EY +A F + D + + + +TA+ E + ++ + + V+A A
Sbjct: 99 WQEYVKTSAD--FVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSA 156
Query: 64 VGQLVGQFAKLVGCYVVG-SAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGI 122
+G L Q ++++ ++ + +K +LL + G + P + ++ G
Sbjct: 157 IGHLFAQLSQILNFRLIAVTRNNKHTEELL--RLGAAYVIDTSTAPLYETVMELTNGIGA 214
Query: 123 NIYFENVGGKMLDAVLLNMRIQGRITLCGMIS 154
+ +++GG + + ++R G G++S
Sbjct: 215 DAAIDSIGGPDGNELAFSLRPNGHFLTIGLLS 246
>pdb|1WZA|A Chain A, Crystal Structure Of Alpha-Amylase From H.Orenii
Length = 488
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 33/80 (41%), Gaps = 9/80 (11%)
Query: 77 CYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPDLDAALKRYFPEGIN--------IYFEN 128
Y+VG + K+GFD FN+K + A K FP G N +Y
Sbjct: 228 VYLVGEVWDISETVAPYFKYGFDSTFNFKLAEAVIATAKAGFPFGFNKKAKHIYGVYDRE 287
Query: 129 VG-GKMLDAVLLNMRIQGRI 147
VG G +DA L Q RI
Sbjct: 288 VGFGNYIDAPFLTNHDQNRI 307
>pdb|4A0S|A Chain A, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|B Chain B, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|C Chain C, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A0S|D Chain D, Structure Of The 2-Octenoyl-Coa Carboxylase Reductase Cinf
In Complex With Nadp And 2-Octenoyl-Coa
pdb|4A10|A Chain A, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|B Chain B, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|C Chain C, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp.
pdb|4A10|D Chain D, Apo-Structure Of 2-Octenoyl-Coa Carboxylase Reductase Cinf
From Streptomyces Sp
Length = 447
Score = 30.4 bits (67), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 48/123 (39%), Gaps = 16/123 (13%)
Query: 50 KQGEYVFVSAASGAVGQLVGQFAKLVG---CYVVGSAGSKDKV-----DLLKNKFGFDEA 101
KQG+ V + ASG +G QF K G VV SA + V DL+ N+
Sbjct: 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRALGCDLVINRAELGIT 278
Query: 102 FNYKEEPDLDAALKRYFPEGI--------NIYFENVGGKMLDAVLLNMRIQGRITLCGMI 153
+ ++P R + + +I FE+ G ++ R G + CG
Sbjct: 279 DDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSS 338
Query: 154 SQY 156
S Y
Sbjct: 339 SGY 341
>pdb|3GAZ|A Chain A, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
pdb|3GAZ|B Chain B, Crystal Structure Of An Alcohol Dehydrogenase Superfamily
Protein From Novosphingobium Aromaticivorans
Length = 343
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 37 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
+TA+ G + + G+ V + G VG + Q A G V +A D ++ +++
Sbjct: 136 ITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSD-LEYVRDLG 194
Query: 97 GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLC 150
+ EP+ D A + +G ++ ++ +GG +LDA ++ G + C
Sbjct: 195 A--TPIDASREPE-DYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSC 245
>pdb|2AR7|A Chain A, Crystal Structure Of Human Adenylate Kinase 4, Ak4
pdb|2AR7|B Chain B, Crystal Structure Of Human Adenylate Kinase 4, Ak4
pdb|2BBW|A Chain A, Crystal Structure Of Human Adenylate Kinase 4 (Ak4) In
Complex With Diguanosine Pentaphosphate
pdb|2BBW|B Chain B, Crystal Structure Of Human Adenylate Kinase 4 (Ak4) In
Complex With Diguanosine Pentaphosphate
Length = 246
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 123 NIYFENVGGKMLDAVLLNMRIQGRITLCGMISQ 155
N+YF+++ K+L AV+L G+ T+C I+Q
Sbjct: 17 NLYFQSMASKLLRAVILGPPGSGKGTVCQRIAQ 49
>pdb|1VDY|A Chain A, Nmr Structure Of The Hypothetical Enth-Vhs Domain
At3g16270 From Arabidopsis Thaliana
pdb|2DCP|A Chain A, Fully Automated Nmr Structure Determination Of The
Enth-Vhs Domain At3g16270 From Arabidopsis Thaliana
Length = 140
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 67 LVGQFAKLVGCYVVGSAGSKDKVDLLKNKFGFDEAFNYKEEPD------LDAALKRYFPE 120
+V Q A + Y VG +GS+ + ++ +N F+YK PD L+ A++ E
Sbjct: 64 IVKQKALRLIKYAVGKSGSEFRREMQRNSVAVRNLFHYKGHPDPLKGDALNKAVRETAHE 123
Query: 121 GINIYFENVGG 131
I+ F G
Sbjct: 124 TISAIFSEENG 134
>pdb|1IYZ|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 37 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
+TAY + + GE V V AA+GA+G Q A+ +G V+ +A +K+ L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL 169
Query: 97 GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 151
G +EA Y E P+ A G+++ E V GK ++ L + GR+ G
Sbjct: 170 GAEEAATYAEVPERAKAWG-----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIG 218
>pdb|2CF2|D Chain D, Architecture Of Mammalian Fatty Acid Synthase
pdb|2CF2|M Chain M, Architecture Of Mammalian Fatty Acid Synthase
Length = 295
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 37 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
+TAY + + GE V V AA+GA+G Q A+ +G V+ +A +K+ L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLA-LPLAL 169
Query: 97 GFDEAFNYKEEPD 109
G +EA Y E P+
Sbjct: 170 GAEEAATYAEVPE 182
>pdb|1IZ0|A Chain A, Crystal Structures Of The Quinone Oxidoreductase From
Thermus Thermophilus Hb8 And Its Complex With Nadph
Length = 302
Score = 28.9 bits (63), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 8/115 (6%)
Query: 37 MTAYAGFFEVCSPKQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDKVDLLKNKF 96
+TAY + + GE V V AA+GA+G Q A+ G V+ +A +K+ L
Sbjct: 112 LTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAXGLRVLAAASRPEKLA-LPLAL 169
Query: 97 GFDEAFNYKEEPDLDAALKRYFPEGINIYFENVGGKMLDAVLLNMRIQGRITLCG 151
G +EA Y E P+ A G+++ E V GK ++ L + GR+ G
Sbjct: 170 GAEEAATYAEVPERAKAWG-----GLDLVLE-VRGKEVEESLGLLAHGGRLVYIG 218
>pdb|2B66|D Chain D, 50s Ribosomal Subunit From A Crystal Structure Of Release
Factor Rf1, Trnas And Mrna Bound To The Ribosome. This
File Contains The 50s Subunit From A Crystal Structure
Of Release Factor Rf1, Trnas And Mrna Bound To The
Ribosome And Is Described In Remark 400
pdb|2B9N|D Chain D, 50s Ribosomal Subunit From A Crystal Structure Of Release
Factor Rf2, Trnas And Mrna Bound To The Ribosome. This
File Contains The 50s Subunit From A Crystal Structure
Of Release Factor Rf1, Trnas And Mrna Bound To The
Ribosome And Is Described In Remark 400.
pdb|2B9P|D Chain D, 50s Ribosomal Subunit From A Crystal Structure Of The
Ribosome In Complex With Trnas And Mrna With A Stop
Codon In The A-Site. This File Contains The 50s Subunit
From A Crystal Structure Of The Ribosome In Complex With
Trnas And Mrna With A Stop Codon In The A-Site And Is
Described In Remark 400
Length = 173
Score = 28.5 bits (62), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK 88
K+G+YV V ASG V ++G+ VG VG+ G DK
Sbjct: 107 KEGKYVIVRLASGEVRMILGKCRATVG--EVGNGGRTDK 143
>pdb|1GIY|D Chain D, Crystal Structure Of The Ribosome At 5.5 A Resolution.
This File, 1giy, Contains The 50s Ribosome Subunit. The
30s Ribosome Subunit, Three Trna, And Mrna Molecules Are
In The File 1gix
pdb|1ML5|DD Chain d, Structure Of The E. Coli Ribosomal Termination Complex
With Release Factor 2
pdb|1YL3|D Chain D, Crystal Structure Of 70s Ribosome With Thrs Operator And
Trnas. Large Subunit. The Coordinates For The Small
Subunit Are In The Pdb Entry 1yl4
Length = 178
Score = 28.5 bits (62), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 50 KQGEYVFVSAASGAVGQLVGQFAKLVGCYVVGSAGSKDK 88
K+G+YV V ASG V ++G+ VG VG+ G DK
Sbjct: 107 KEGKYVIVRLASGEVRMILGKCRATVG--EVGNGGRTDK 143
>pdb|3SIL|A Chain A, Sialidase From Salmonella Typhimurium
Length = 379
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 116 RYFPEGINIYFENVGGKM---LDAVLLNMRIQGRITLCGMISQY-NNDKPEGVH 165
+ + + I IY + V K+ +D + IQGR T+ M+ ++ NNDK G +
Sbjct: 75 KTWNKKIAIYNDRVNSKLSRVMDPTCIVANIQGRETILVMVGKWNNNDKTWGAY 128
>pdb|1DIL|A Chain A, Sialidase From Salmonella Typhimurium Complexed With Apana
And Epana Inhibitors
pdb|1DIM|A Chain A, Sialidase From Salmonella Typhimurium Complexed With Epana
Inhibitor
pdb|2SIL|A Chain A, The Structures Of Salmonella Typhimurium Lt2 Neuraminidase
And Its Complex With A Transition State Analogue At 1.6
Angstroms Resolution
pdb|2SIM|A Chain A, The Structures Of Salmonella Typhimurium Lt2 Neuraminidase
And Its Complex With A Transition State Analogue At 1.6
Angstroms Resolution
Length = 381
Score = 28.5 bits (62), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 4/54 (7%)
Query: 116 RYFPEGINIYFENVGGKM---LDAVLLNMRIQGRITLCGMISQY-NNDKPEGVH 165
+ + + I IY + V K+ +D + IQGR T+ M+ ++ NNDK G +
Sbjct: 77 KTWNKKIAIYNDRVNSKLSRVMDPTCIVANIQGRETILVMVGKWNNNDKTWGAY 130
>pdb|3VR8|A Chain A, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum
pdb|3VR8|E Chain E, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum
pdb|3VRB|A Chain A, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum With The Specific
Inhibitor Flutolanil And Substrate Fumarate
pdb|3VRB|E Chain E, Mitochondrial Rhodoquinol-Fumarate Reductase From The
Parasitic Nematode Ascaris Suum With The Specific
Inhibitor Flutolanil And Substrate Fumarate
Length = 645
Score = 28.1 bits (61), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 36/75 (48%), Gaps = 12/75 (16%)
Query: 161 PEGVHNLTCLISKRIRME-GFLVPDYFHLYPKFLEMMIPRIKEGKIVYVEDKAEGLESAP 219
P G++ + CLI++ R E GFLV +F+E P+ K+ V +AE +E
Sbjct: 277 PTGIYGVGCLITEGSRGEGGFLVNSEGE---RFMERYAPKAKDLASRDVVSRAETIE--- 330
Query: 220 AALVGLFSGRNVGKQ 234
+ GR VG +
Sbjct: 331 -----IMEGRGVGPE 340
>pdb|1ATG|A Chain A, Azotobacter Vinelandii Periplasmic Molybdate-Binding
Protein
Length = 231
Score = 27.7 bits (60), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 62 GAVGQLVGQFAKLVGCYVVGSAGSKDKV 89
G + QL GQFAK G VV S+GS V
Sbjct: 12 GTLEQLAGQFAKQTGHAVVISSGSSGPV 39
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.140 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,458,352
Number of Sequences: 62578
Number of extensions: 324563
Number of successful extensions: 857
Number of sequences better than 100.0: 48
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 775
Number of HSP's gapped (non-prelim): 49
length of query: 241
length of database: 14,973,337
effective HSP length: 96
effective length of query: 145
effective length of database: 8,965,849
effective search space: 1300048105
effective search space used: 1300048105
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)