RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= 026219
(241 letters)
>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase
TrmB {Bacillus subtilis [TaxId: 1423]}
Length = 204
Score = 68.0 bits (165), Expect = 1e-14
Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 5/127 (3%)
Query: 115 DWSEVYKNPTLPLMVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELAL 174
W+ V+ N P+ +++G+G G+F+ +A++NPD NY+G+E+ + ++ A V++
Sbjct: 21 KWNTVFGNDN-PIHIEVGTGKGQFISGMAKQNPDI-NYIGIELFKSVIVTAVQKVKDSEA 78
Query: 175 SNIHFLFANASVSFKQLVSSYPGPLMLVSILCPDPHFKKKHHKRRVVQKPLVDSIIDYLM 234
N+ L + + PG + V + DP KK+H KRR+ + + +
Sbjct: 79 QNVKLLNID---ADTLTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMG 135
Query: 235 PGGKVYF 241
GG ++F
Sbjct: 136 KGGSIHF 142
>d1yzha1 c.66.1.53 (A:8-211) tRNA (guanine-N(7)-)-methyltransferase
TrmB {Streptococcus pneumoniae [TaxId: 1313]}
Length = 204
Score = 64.1 bits (155), Expect = 3e-13
Identities = 37/127 (29%), Positives = 68/127 (53%), Gaps = 5/127 (3%)
Query: 115 DWSEVYKNPTLPLMVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELAL 174
W +++ N P+ V++GSG G F+ +A++NPD NY+G++I++ ++ A V E+ +
Sbjct: 23 KWRDLFGNDN-PIHVEVGSGKGAFVSGMAKQNPDI-NYIGIDIQKSVLSYALDKVLEVGV 80
Query: 175 SNIHFLFANASVSFKQLVSSYPGPLMLVSILCPDPHFKKKHHKRRVVQKPLVDSIIDYLM 234
NI L+ + G + + + DP KK+H KRR+ K +D+ L
Sbjct: 81 PNIKLLWVD---GSDLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILP 137
Query: 235 PGGKVYF 241
G+++F
Sbjct: 138 ENGEIHF 144
>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 324
Score = 44.0 bits (103), Expect = 7e-06
Identities = 17/112 (15%), Positives = 35/112 (31%), Gaps = 5/112 (4%)
Query: 128 MVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFLFANASVS 187
+++ GSGSG ++L++ G + E+R+ A+ + S +
Sbjct: 102 VLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN 161
Query: 188 FKQLVSSYPGPLMLVSILCPDPHFKKKHHKRRVVQKPLVDSIIDYLMPGGKV 239
+ G + L D + + +L GG
Sbjct: 162 VDFIHKDISGATEDIKSLTFDAVALDMLNPHVT-----LPVFYPHLKHGGVC 208
>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 406
Score = 41.6 bits (97), Expect = 4e-05
Identities = 21/111 (18%), Positives = 33/111 (29%), Gaps = 2/111 (1%)
Query: 129 VDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFLFANASVSF 188
+D+GSG G ++ A G EI +EL + +V F
Sbjct: 221 MDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEF 279
Query: 189 KQLVSSYPGPLMLVSILCPDPHFKKKHHKRRVVQKPLVDSIIDYLMPGGKV 239
S + I D + K V+ I+ G K+
Sbjct: 280 SLKKSFVDNNRVAELIPQCDVILVNNFLFDEDLNK-KVEKILQTAKVGCKI 329
>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852
{Thermoplasma acidophilum [TaxId: 2303]}
Length = 250
Score = 39.3 bits (91), Expect = 2e-04
Identities = 9/53 (16%), Positives = 20/53 (37%)
Query: 128 MVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFL 180
++++G GSG ++ G +E + +K+A + E
Sbjct: 89 ILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRT 141
>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 292
Score = 35.3 bits (80), Expect = 0.004
Identities = 16/115 (13%), Positives = 35/115 (30%), Gaps = 7/115 (6%)
Query: 130 DIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFLFANASVSFK 189
D+ G+G I L + ++ K++K A + ++
Sbjct: 62 DVACGTGVDSIMLVEEGF---SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 118
Query: 190 QLVSSYPGPLMLVSILCPD---PHFKKKHHKRRVVQKPLVDSIIDYLMPGGKVYF 241
L P +++C H + + + +I + PGG +
Sbjct: 119 TLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRL-ALKNIASMVRPGGLLVI 172
>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga
maritima [TaxId: 2336]}
Length = 266
Score = 35.5 bits (81), Expect = 0.004
Identities = 16/53 (30%), Positives = 23/53 (43%)
Query: 128 MVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFL 180
++D G GSG LAR SG E R++ K AE + + L +
Sbjct: 107 IIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTI 159
>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 264
Score = 34.6 bits (79), Expect = 0.007
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 129 VDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAE 166
++ G+GSG + L R +G + E R + A
Sbjct: 101 LEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHAR 138
>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus
cereus [TaxId: 1396]}
Length = 281
Score = 33.7 bits (76), Expect = 0.015
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 129 VDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFW 168
VD G G G + L P+ Y G++ + L+ A
Sbjct: 32 VDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEAREL 71
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus
halodurans [TaxId: 86665]}
Length = 231
Score = 33.5 bits (75), Expect = 0.016
Identities = 13/113 (11%), Positives = 35/113 (30%), Gaps = 16/113 (14%)
Query: 129 VDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFLFANASVSF 188
+D+ +G G A + ++ + ++K A +++ + ++ +A
Sbjct: 20 LDVATGGGHVANAFAPFVK---KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMP 76
Query: 189 KQLVSSYPGPLMLVSILCPDPHFKKKHHKRRVVQKPLVDSIIDYLMPGGKVYF 241
+ + + P+P V L GG++
Sbjct: 77 FTDERFHIVTCRIAAHHFPNP-------------ASFVSEAYRVLKKGGQLLL 116
>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Human (Homo sapiens) [TaxId: 9606]}
Length = 224
Score = 31.8 bits (71), Expect = 0.057
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 14/112 (12%)
Query: 128 MVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFLFANASVS 187
+D+GSGSG AR +G +G++ ++LV + V++ + + V
Sbjct: 80 ALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVG 139
Query: 188 FKQLVSSYPGPLMLVSILCPDPHFKKKHHKRRVVQKPLVDSIIDYLMPGGKV 239
+ + H P ++ID L PGG++
Sbjct: 140 ------------DGRMGYAEEAPYDAIHVGAAAPVVP--QALIDQLKPGGRL 177
>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase
3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}
Length = 311
Score = 31.4 bits (70), Expect = 0.085
Identities = 16/111 (14%), Positives = 32/111 (28%), Gaps = 7/111 (6%)
Query: 130 DIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFLFANA----- 184
D+G G+G ++ A+ LG++ + L + + I +
Sbjct: 41 DVGCGTGILSMFAAKAGAKK--VLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHL 98
Query: 185 SVSFKQLVSSYPGPLMLVSILCPDPHFKKKHHKRRVVQKPLVDSIIDYLMP 235
V ++ S L+ D K+ D L+
Sbjct: 99 PVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYPDICTISLVA 149
>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone
methyltransferase Dot1l {Human (Homo sapiens) [TaxId:
9606]}
Length = 328
Score = 31.3 bits (70), Expect = 0.094
Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 128 MVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFLFANASVS 187
VD+GSG G+ ++ +A ++ G+E K AE +E + +A +
Sbjct: 155 FVDLGSGVGQVVLQVAAATNC-KHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYT 213
Query: 188 FKQ 190
++
Sbjct: 214 LER 216
>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis
[TaxId: 1423]}
Length = 234
Score = 30.7 bits (68), Expect = 0.14
Identities = 18/112 (16%), Positives = 35/112 (31%), Gaps = 16/112 (14%)
Query: 130 DIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFLFANASVSFK 189
DIG+G+G + + +G++ +++V+ A + QE + N+ F A
Sbjct: 22 DIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPF 78
Query: 190 QLVSSYPGPLMLVSILCPDPHFKKKHHKRRVVQKPLVDSIIDYLMPGGKVYF 241
S + D + R L G+
Sbjct: 79 PDDSFDIITCRYAAHHFSDVRKAVREVAR-------------VLKQDGRFLL 117
>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 223
Score = 29.4 bits (65), Expect = 0.27
Identities = 14/57 (24%), Positives = 25/57 (43%), Gaps = 5/57 (8%)
Query: 128 MVDIGSGSGRFLIWLARRNPDSGNYL-----GLEIRQKLVKRAEFWVQELALSNIHF 179
++D+GSGSG R G G+E + +LV+R++ + S +
Sbjct: 84 ILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS 140
>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase
{Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}
Length = 252
Score = 29.5 bits (65), Expect = 0.27
Identities = 14/99 (14%), Positives = 27/99 (27%), Gaps = 6/99 (6%)
Query: 130 DIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALS-NIHFLFANASVSF 188
D+G G G L+ R G Y G++I + + A + + + F ++
Sbjct: 30 DLGCGKGGDLLKYERAGI--GEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRH 87
Query: 189 KQLVSSYPGP---LMLVSILCPDPHFKKKHHKRRVVQKP 224
L + +P
Sbjct: 88 MDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRP 126
>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371
{Clostridium acetobutylicum [TaxId: 1488]}
Length = 246
Score = 29.6 bits (65), Expect = 0.29
Identities = 16/112 (14%), Positives = 37/112 (33%), Gaps = 14/112 (12%)
Query: 130 DIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFLFANASVSFK 189
D+ G+G L + N +++ Q+++ AE + L ++++
Sbjct: 43 DLACGTGNLTENLCPKFK---NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN 99
Query: 190 QLVSSYPGPLMLVSILCPDPHFKKKHHKRRVVQKPLVDSIIDYLMPGGKVYF 241
+ L + + KK ++ ++L GG F
Sbjct: 100 RKFDLITCCLDSTNYIIDSDDLKK-----------YFKAVSNHLKEGGVFIF 140
>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas
syringae [TaxId: 317]}
Length = 201
Score = 28.5 bits (62), Expect = 0.62
Identities = 7/116 (6%), Positives = 20/116 (17%), Gaps = 9/116 (7%)
Query: 130 DIGSGSGRFLIWLARRNPDS----GNYLGLEIRQKLVKRAEFWVQELALSNIHFLFANAS 185
G + + WL+ + + +E +
Sbjct: 26 VPLCGKSQDMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIW 85
Query: 186 VSFKQLVSSYPGPLMLVSILCPDPHFKKKHHKRRVVQKPLVDSIIDYLMPGGKVYF 241
+++ + R VQ + +
Sbjct: 86 CGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQH-----LEALMPQACSGLL 136
>d2ih2a1 c.66.1.27 (A:21-243) DNA methylase TaqI, N-terminal domain
{Thermus aquaticus [TaxId: 271]}
Length = 223
Score = 28.5 bits (62), Expect = 0.64
Identities = 7/39 (17%), Positives = 15/39 (38%)
Query: 130 DIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFW 168
+ G FL + + ++G+EI K + +
Sbjct: 25 EPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLPPWA 63
>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia
carotovora [TaxId: 554]}
Length = 225
Score = 28.3 bits (62), Expect = 0.72
Identities = 7/39 (17%), Positives = 15/39 (38%), Gaps = 3/39 (7%)
Query: 130 DIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFW 168
++GS G F L + +E ++ + A+
Sbjct: 26 ELGSFKGDFTSRLQEHFN---DITCVEASEEAISHAQGR 61
>d2h00a1 c.66.1.54 (A:5-254) Methyltransferase 10 domain containing
protein METT10D {Human (Homo sapiens) [TaxId: 9606]}
Length = 250
Score = 27.8 bits (61), Expect = 1.0
Identities = 13/89 (14%), Positives = 28/89 (31%), Gaps = 1/89 (1%)
Query: 126 PLMVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFLFANAS 185
+DIG+G+ L E+ A+ V++ LS++ +
Sbjct: 63 RRGIDIGTGASCIYPLLGATLNGWYFL-ATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQ 121
Query: 186 VSFKQLVSSYPGPLMLVSILCPDPHFKKK 214
+ ++ +C P F +
Sbjct: 122 KTLLMDALKEESEIIYDFCMCNPPFFANQ 150
>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli
[TaxId: 562]}
Length = 245
Score = 27.6 bits (60), Expect = 1.1
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 128 MVDIGSGSGRFLIWLARRNP 147
++D+GSGSG L AR +
Sbjct: 37 ILDLGSGSGEMLCTWARDHG 56
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 25.8 bits (57), Expect = 1.1
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 210 HFKKKHHKRRVVQ 222
HF+ K HK+R+ Q
Sbjct: 34 HFRSKDHKKRLKQ 46
>d1fp1d2 c.66.1.12 (D:129-372) Chalcone O-methyltransferase {Alfalfa
(Medicago sativa) [TaxId: 3879]}
Length = 244
Score = 27.4 bits (60), Expect = 1.3
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 112 PIPDWSEVYKNPT-LPLMVDIGSGSGRFLIWLARRNPD 148
+ E+Y + +VD+G GSGR L + + P
Sbjct: 68 EMKRMLEIYTGFEGISTLVDVGGGSGRNLELIISKYPL 105
>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 316
Score = 27.4 bits (60), Expect = 1.4
Identities = 13/97 (13%), Positives = 26/97 (26%), Gaps = 3/97 (3%)
Query: 129 VDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFLFANA-SVS 187
+D+GSG+G ++ A+ +G+E + + + V
Sbjct: 38 LDVGSGTGILCMFAAKAGARKV--IGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVE 95
Query: 188 FKQLVSSYPGPLMLVSILCPDPHFKKKHHKRRVVQKP 224
+ L + H R P
Sbjct: 96 LPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAP 132
>d1gkab_ b.60.1.1 (B:) Alpha-crustacyanin {European lobster (Homarus
gammarus) [TaxId: 6707]}
Length = 174
Score = 27.2 bits (59), Expect = 1.4
Identities = 7/79 (8%), Positives = 14/79 (17%), Gaps = 8/79 (10%)
Query: 92 GHARIRQHVNPLSSSFTVPAPIPDWSEV----YKNPTLPLMVDIGSGSGRFLIWLARRNP 147
+ P+ EV Y+ + ++ R P
Sbjct: 78 FKVYPTKEFPAAHMLIDAPSVFAAPYEVIETDYETYSCVYSCITTDNYKSEFAFVFSRTP 137
Query: 148 DSGNYLGLEIRQKLVKRAE 166
+K
Sbjct: 138 Q----TSGPAVEKTAAVFN 152
>d2dfka1 a.87.1.1 (A:37-239) Rho guanine nucleotide exchange factor
9, Collybistin {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 203
Score = 27.4 bits (60), Expect = 1.4
Identities = 13/80 (16%), Positives = 32/80 (40%), Gaps = 1/80 (1%)
Query: 156 EIRQKLVKRAEFWVQELALSNIHFL-FANASVSFKQLVSSYPGPLMLVSILCPDPHFKKK 214
+ L K+ L+ FL + + + +++ M +S L D ++
Sbjct: 72 GFVRDLEKQYNNDDPHLSEIGPCFLEHQDGFWIYSEYCNNHLDACMELSKLMKDSRYQHF 131
Query: 215 HHKRRVVQKPLVDSIIDYLM 234
R++Q+ + +I +L+
Sbjct: 132 FEACRLLQQMIDIAIDGFLL 151
>d1u78a2 a.4.1.2 (A:55-104) Transposase tc3a1-65 {Caenorhabditis
elegans [TaxId: 6239]}
Length = 50
Score = 25.1 bits (54), Expect = 1.6
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 9/37 (24%)
Query: 50 RNTASAASAACNTSKEIRSTDLVALEFAELNLPVSNK 86
RN AAS +C T+++IR+ EL L S +
Sbjct: 13 RNVIRAASNSCKTARDIRN---------ELQLSASKR 40
>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 27.1 bits (59), Expect = 1.9
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 130 DIGSGSGRFLIWLARRNPDS 149
D+G G+G ++ A+
Sbjct: 44 DVGCGTGILSMFAAKHGAKH 63
>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus
fulgidus [TaxId: 2234]}
Length = 209
Score = 26.6 bits (58), Expect = 2.6
Identities = 9/45 (20%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 128 MVDIGSGSGRFLIWLARRNPDSGNYLGLEIR----QKLVKRAEFW 168
++ +G+ SG + LA + Y +E +KL++
Sbjct: 60 VLYLGAASGTTVSHLADIVDEGIIY-AVEYSAKPFEKLLELVRER 103
>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 227
Score = 26.2 bits (57), Expect = 3.0
Identities = 6/39 (15%), Positives = 16/39 (41%)
Query: 128 MVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAE 166
++ +G SG ++ G G+E ++++
Sbjct: 77 VLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELV 115
>d1vz6a_ d.154.1.2 (A:) Glutamate N-acetyltransferase 2 (ornithine
acetyltransferase) {Streptomyces clavuligerus [TaxId:
1901]}
Length = 383
Score = 26.6 bits (58), Expect = 3.3
Identities = 4/27 (14%), Positives = 12/27 (44%)
Query: 115 DWSEVYKNPTLPLMVDIGSGSGRFLIW 141
+E + + + +D+ G F ++
Sbjct: 343 AVAEHLRGDEVVIGIDLAIADGAFTVY 369
>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 215
Score = 26.0 bits (56), Expect = 3.5
Identities = 10/56 (17%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 128 MVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNIHFLFAN 183
++++G+GSG ++ + +E +LV+ A+ ++ + N+H + +
Sbjct: 82 ILEVGTGSGWNAALISEIV--KTDVYTIERIPELVEFAKRNLERAGVKNVHVILGD 135
>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus
jannaschii [TaxId: 2190]}
Length = 230
Score = 25.8 bits (56), Expect = 4.2
Identities = 5/50 (10%), Positives = 16/50 (32%), Gaps = 1/50 (2%)
Query: 128 MVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRAEFWVQELALSNI 177
++ +G+ +G +A +E ++++ E
Sbjct: 78 ILYLGASAGTTPSHVADIADKG-IVYAIEYAPRIMRELLDACAERENIIP 126
>d1h3ga1 b.1.18.2 (A:3-95) Cyclomaltodextrinase, N-terminal domain
{Flavobacterium sp. 92 [TaxId: 197856]}
Length = 93
Score = 24.7 bits (54), Expect = 4.4
Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 13/58 (22%)
Query: 114 PDWSEVYKNPTLPLMV---DIG------SGSGRFLIWLARRNPDSGNYL--GLEIRQK 160
P W ++ L LMV DIG G L+ + + NYL LEI +
Sbjct: 10 PFWWAGMQHKGLQLMVHGRDIGRMEAALDYPGVRLV--STTRVPNANYLFVDLEIGPE 65
>d1fp2a2 c.66.1.12 (A:109-352) Isoflavone O-methyltransferase
{Alfalfa (Medicago sativa) [TaxId: 3879]}
Length = 244
Score = 25.9 bits (56), Expect = 4.8
Identities = 9/56 (16%), Positives = 18/56 (32%)
Query: 93 HARIRQHVNPLSSSFTVPAPIPDWSEVYKNPTLPLMVDIGSGSGRFLIWLARRNPD 148
+ N +S + + + L +VD+G G+G + P
Sbjct: 49 NPEYNTSFNDAMASDSKLINLALRDCDFVFDGLESIVDVGGGTGTTAKIICETFPK 104
>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase
{Sulfolobus tokodaii [TaxId: 111955]}
Length = 224
Score = 25.6 bits (55), Expect = 5.1
Identities = 10/58 (17%), Positives = 21/58 (36%), Gaps = 3/58 (5%)
Query: 108 TVPAPIPDWSEVYKNPTLPLMVDIGSGSGRFLIWLARRNPDSGNYLGLEIRQKLVKRA 165
T + +++IG+G G + +A + +EI +K+ A
Sbjct: 54 TALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEI---VDKVVSVEINEKMYNYA 108
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.323 0.136 0.423
Gapped
Lambda K H
0.267 0.0559 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 932,864
Number of extensions: 41493
Number of successful extensions: 175
Number of sequences better than 10.0: 1
Number of HSP's gapped: 175
Number of HSP's successfully gapped: 46
Length of query: 241
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 158
Effective length of database: 1,268,006
Effective search space: 200344948
Effective search space used: 200344948
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 52 (24.2 bits)