Query 026221
Match_columns 241
No_of_seqs 163 out of 1287
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 05:13:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026221.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026221hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02864 enoyl-CoA hydratase 100.0 3.3E-56 7.2E-61 398.8 23.3 236 1-236 2-237 (310)
2 KOG1206 Peroxisomal multifunct 100.0 5E-39 1.1E-43 269.6 -0.0 195 22-235 6-200 (272)
3 PF13452 MaoC_dehydrat_N: N-te 99.9 5.3E-25 1.1E-29 173.5 11.0 124 12-148 2-132 (132)
4 PRK13691 (3R)-hydroxyacyl-ACP 99.9 2E-21 4.3E-26 159.8 15.0 147 5-158 1-148 (166)
5 PRK13692 (3R)-hydroxyacyl-ACP 99.8 1.7E-19 3.8E-24 147.3 15.0 146 5-157 1-147 (159)
6 cd03448 HDE_HSD HDE_HSD The R 99.5 1.5E-15 3.2E-20 118.9 1.9 54 183-236 1-54 (122)
7 cd03450 NodN NodN (nodulation 99.5 7.6E-13 1.6E-17 107.0 11.3 142 4-154 4-147 (149)
8 cd03452 MaoC_C MaoC_C The C-t 99.4 1.1E-12 2.4E-17 105.0 11.8 134 12-157 6-141 (142)
9 cd03446 MaoC_like MoaC_like 99.4 2.7E-12 5.8E-17 101.7 12.7 132 12-153 6-139 (140)
10 cd03454 YdeM YdeM is a Bacillu 99.4 2E-12 4.3E-17 102.7 11.0 133 12-155 5-140 (140)
11 cd03451 FkbR2 FkbR2 is a Strep 99.4 4.7E-12 1E-16 101.0 11.8 133 12-156 8-144 (146)
12 cd03453 SAV4209_like SAV4209_l 99.3 3.8E-11 8.2E-16 94.0 11.0 125 13-151 1-125 (127)
13 cd03449 R_hydratase (R)-hydrat 99.3 6.5E-11 1.4E-15 91.8 11.8 125 13-153 3-127 (128)
14 cd03441 R_hydratase_like (R)-h 99.2 3.9E-10 8.5E-15 87.1 12.0 122 18-151 4-125 (127)
15 cd03447 FAS_MaoC FAS_MaoC, the 99.1 1.4E-11 3.1E-16 96.8 2.2 49 189-237 5-53 (126)
16 PF01575 MaoC_dehydratas: MaoC 99.1 2E-12 4.4E-17 100.7 -3.7 55 183-237 6-61 (122)
17 cd03455 SAV4209 SAV4209 is a S 99.1 6E-10 1.3E-14 86.7 10.2 122 14-152 1-122 (123)
18 PRK08190 bifunctional enoyl-Co 99.0 2.6E-09 5.6E-14 101.2 12.0 130 12-157 15-144 (466)
19 TIGR02278 PaaN-DH phenylacetic 98.9 6.4E-09 1.4E-13 102.4 11.0 131 12-154 529-661 (663)
20 PRK13693 (3R)-hydroxyacyl-ACP 98.9 5.1E-10 1.1E-14 89.7 0.8 43 194-236 21-64 (142)
21 COG2030 MaoC Acyl dehydratase 98.8 8.2E-10 1.8E-14 90.1 -0.4 45 192-236 32-77 (159)
22 PRK11563 bifunctional aldehyde 98.8 3.5E-08 7.6E-13 97.4 10.8 132 12-155 541-674 (675)
23 cd03455 SAV4209 SAV4209 is a S 98.7 3.7E-09 8E-14 82.2 1.6 42 195-236 11-53 (123)
24 cd03449 R_hydratase (R)-hydrat 98.7 6.8E-09 1.5E-13 80.4 1.9 44 192-235 10-54 (128)
25 cd03453 SAV4209_like SAV4209_l 98.7 5.6E-09 1.2E-13 81.7 1.2 42 195-236 12-54 (127)
26 cd03452 MaoC_C MaoC_C The C-t 98.6 6.1E-09 1.3E-13 83.3 0.6 42 195-236 18-60 (142)
27 cd03441 R_hydratase_like (R)-h 98.6 9.6E-09 2.1E-13 79.2 -0.1 42 195-236 10-52 (127)
28 cd03446 MaoC_like MoaC_like 98.6 9.1E-09 2E-13 81.3 -0.5 42 195-236 18-60 (140)
29 cd03450 NodN NodN (nodulation 98.6 1.8E-08 4E-13 81.4 0.9 43 195-237 24-67 (149)
30 COG2030 MaoC Acyl dehydratase 98.5 2.2E-06 4.9E-11 69.9 11.4 134 12-155 21-155 (159)
31 cd03451 FkbR2 FkbR2 is a Strep 98.4 3E-08 6.4E-13 79.0 -0.8 39 198-236 25-63 (146)
32 cd03447 FAS_MaoC FAS_MaoC, the 98.4 4.1E-06 9E-11 65.7 11.4 117 20-152 6-123 (126)
33 PRK13691 (3R)-hydroxyacyl-ACP 98.3 1.5E-07 3.3E-12 77.4 1.1 37 198-234 24-60 (166)
34 PRK08190 bifunctional enoyl-Co 98.3 1.9E-07 4E-12 88.6 1.6 42 193-234 24-66 (466)
35 COG3777 Uncharacterized conser 98.2 8.8E-07 1.9E-11 76.0 3.7 131 87-235 72-210 (273)
36 cd03454 YdeM YdeM is a Bacillu 98.2 4.4E-07 9.5E-12 71.9 0.7 40 195-234 17-56 (140)
37 PRK13692 (3R)-hydroxyacyl-ACP 98.1 1.3E-06 2.9E-11 71.3 1.2 36 198-233 24-59 (159)
38 PRK13693 (3R)-hydroxyacyl-ACP 98.0 8.2E-05 1.8E-09 59.5 10.8 112 12-138 10-126 (142)
39 TIGR02278 PaaN-DH phenylacetic 97.9 2.2E-06 4.7E-11 84.6 -0.8 44 194-237 540-584 (663)
40 PRK11563 bifunctional aldehyde 97.8 2.9E-06 6.2E-11 84.0 -0.8 42 195-236 553-595 (675)
41 PF01575 MaoC_dehydratas: MaoC 97.4 7.7E-05 1.7E-09 57.8 2.2 113 12-135 5-118 (122)
42 cd00586 4HBT 4-hydroxybenzoyl- 97.0 0.012 2.7E-07 42.7 10.0 58 92-154 51-108 (110)
43 PRK00006 fabZ (3R)-hydroxymyri 96.7 0.018 3.8E-07 45.8 9.8 59 91-155 87-145 (147)
44 TIGR02286 PaaD phenylacetic ac 96.7 0.022 4.9E-07 43.2 9.8 56 93-153 57-112 (114)
45 cd03440 hot_dog The hotdog fol 96.7 0.023 4.9E-07 38.6 9.1 59 89-152 41-99 (100)
46 TIGR00369 unchar_dom_1 unchara 96.3 0.033 7.2E-07 42.4 8.6 56 92-153 61-116 (117)
47 PRK11688 hypothetical protein; 96.1 0.07 1.5E-06 43.0 9.7 58 91-154 96-153 (154)
48 PRK04424 fatty acid biosynthes 96.0 0.053 1.2E-06 45.3 9.1 56 93-154 126-181 (185)
49 PRK10800 acyl-CoA thioesterase 95.9 0.099 2.1E-06 40.4 9.7 60 92-156 53-112 (130)
50 cd03443 PaaI_thioesterase PaaI 95.9 0.11 2.3E-06 38.6 9.4 55 93-153 58-112 (113)
51 PF03061 4HBT: Thioesterase su 95.7 0.087 1.9E-06 36.4 7.7 51 91-146 29-79 (79)
52 cd01288 FabZ FabZ is a 17kD be 95.7 0.11 2.3E-06 39.9 8.9 55 93-153 75-129 (131)
53 cd03442 BFIT_BACH Brown fat-in 95.6 0.13 2.8E-06 38.7 9.1 59 93-156 52-114 (123)
54 cd03448 HDE_HSD HDE_HSD The R 95.6 0.06 1.3E-06 41.8 7.1 108 21-149 10-117 (122)
55 PRK10254 thioesterase; Provisi 95.5 0.18 3.8E-06 40.1 9.7 60 91-156 78-137 (137)
56 PF07977 FabA: FabA-like domai 95.4 0.092 2E-06 41.3 7.7 55 91-148 82-137 (138)
57 TIGR01750 fabZ beta-hydroxyacy 95.2 0.15 3.2E-06 40.1 8.4 57 91-153 83-139 (140)
58 TIGR02799 thio_ybgC tol-pal sy 95.0 0.49 1.1E-05 35.9 10.5 59 93-157 53-111 (126)
59 cd01287 FabA FabA, beta-hydrox 94.9 0.25 5.5E-06 39.8 9.0 60 92-153 85-145 (150)
60 cd00493 FabA_FabZ FabA/Z, beta 94.8 0.25 5.5E-06 37.7 8.6 52 92-149 75-126 (131)
61 COG2050 PaaI HGG motif-contain 94.7 0.33 7.2E-06 38.3 9.3 58 94-156 81-138 (141)
62 PF13279 4HBT_2: Thioesterase- 94.7 0.54 1.2E-05 35.5 10.0 63 92-158 43-107 (121)
63 PLN02864 enoyl-CoA hydratase 94.3 0.38 8.2E-06 43.4 9.6 118 13-152 183-303 (310)
64 TIGR00051 acyl-CoA thioester h 94.2 0.69 1.5E-05 34.3 9.5 54 94-152 50-103 (117)
65 PRK10293 acyl-CoA esterase; Pr 94.2 0.61 1.3E-05 36.9 9.5 57 92-154 79-135 (136)
66 PLN02322 acyl-CoA thioesterase 93.8 0.86 1.9E-05 37.0 9.9 60 92-155 70-134 (154)
67 COG0824 FcbC Predicted thioest 93.8 1.3 2.8E-05 34.9 10.8 60 93-158 57-116 (137)
68 cd00556 Thioesterase_II Thioes 93.7 0.46 9.9E-06 34.3 7.5 57 92-153 42-98 (99)
69 PRK13188 bifunctional UDP-3-O- 93.5 0.54 1.2E-05 44.8 9.5 59 92-155 402-460 (464)
70 PF13452 MaoC_dehydrat_N: N-te 93.1 0.0039 8.4E-08 48.5 -4.8 44 192-235 11-55 (132)
71 PF12119 DUF3581: Protein of u 92.8 0.031 6.8E-07 47.2 0.0 23 192-214 13-37 (218)
72 PRK07531 bifunctional 3-hydrox 91.2 1.5 3.3E-05 42.0 9.5 59 93-156 396-454 (495)
73 PF14539 DUF4442: Domain of un 90.7 0.96 2.1E-05 35.4 6.4 57 93-153 75-131 (132)
74 COG0764 FabA 3-hydroxymyristoy 89.5 1.3 2.7E-05 35.8 6.3 94 52-154 47-143 (147)
75 PRK05174 3-hydroxydecanoyl-(ac 89.2 3 6.5E-05 34.4 8.4 55 93-150 105-160 (172)
76 PLN02370 acyl-ACP thioesterase 88.8 3.8 8.2E-05 38.6 9.8 62 92-157 196-257 (419)
77 TIGR02447 yiiD_Cterm thioester 88.2 2.1 4.6E-05 33.8 6.7 59 91-154 68-136 (138)
78 cd01289 FabA_like Domain of un 87.9 5.5 0.00012 31.3 8.9 59 91-154 77-136 (138)
79 TIGR01749 fabA beta-hydroxyacy 86.7 5 0.00011 33.0 8.3 55 93-150 102-157 (169)
80 TIGR00189 tesB acyl-CoA thioes 85.3 4.3 9.3E-05 35.3 7.7 60 91-155 212-271 (271)
81 COG1946 TesB Acyl-CoA thioeste 84.0 5.6 0.00012 35.6 7.8 65 88-157 221-285 (289)
82 COG1607 Acyl-CoA hydrolase [Li 82.0 14 0.0003 30.2 8.7 56 98-156 62-120 (157)
83 PRK10526 acyl-CoA thioesterase 81.6 8.8 0.00019 34.1 8.2 61 91-156 224-284 (286)
84 cd03444 Thioesterase_II_repeat 81.6 12 0.00026 27.9 7.8 60 89-153 44-103 (104)
85 PRK10694 acyl-CoA esterase; Pr 81.4 11 0.00024 29.5 7.9 56 98-157 60-122 (133)
86 PLN02647 acyl-CoA thioesterase 78.3 18 0.00039 34.3 9.5 60 98-157 339-403 (437)
87 PF01643 Acyl-ACP_TE: Acyl-ACP 75.0 28 0.0006 30.3 9.3 60 94-157 62-121 (261)
88 PF13622 4HBT_3: Thioesterase- 71.3 53 0.0011 27.9 10.1 56 94-154 199-255 (255)
89 PF02551 Acyl_CoA_thio: Acyl-C 70.3 43 0.00093 26.5 8.3 59 86-150 69-128 (131)
90 PF09500 YiiD_Cterm: Putative 69.0 41 0.00089 26.9 8.2 66 85-155 69-143 (144)
91 KOG3328 HGG motif-containing t 61.7 84 0.0018 25.4 9.1 64 91-158 80-143 (148)
92 PF14765 PS-DH: Polyketide syn 60.6 76 0.0016 27.3 9.1 60 89-153 226-286 (295)
93 PF10862 FcoT: FcoT-like thioe 55.6 83 0.0018 25.6 7.6 53 90-143 93-148 (157)
94 PLN02868 acyl-CoA thioesterase 50.9 47 0.001 30.9 6.5 55 92-151 356-410 (413)
95 COG1480 Predicted membrane-ass 46.4 6.6 0.00014 39.1 -0.0 34 207-240 539-594 (700)
96 PLN02647 acyl-CoA thioesterase 44.0 1.5E+02 0.0033 28.1 8.7 57 98-157 150-211 (437)
97 PF13622 4HBT_3: Thioesterase- 39.3 2.3E+02 0.0051 23.8 8.6 55 97-158 38-92 (255)
98 COG5496 Predicted thioesterase 38.8 1.9E+02 0.0042 22.7 9.6 57 93-155 58-114 (130)
99 PF01643 Acyl-ACP_TE: Acyl-ACP 35.8 2.1E+02 0.0046 24.7 7.9 51 97-151 208-258 (261)
100 PF10738 Lpp-LpqN: Probable li 34.2 16 0.00035 30.2 0.5 41 196-236 67-124 (175)
101 PF06950 DUF1293: Protein of u 26.3 35 0.00075 26.0 1.0 18 205-222 45-67 (115)
102 PF13389 DUF4107: Protein of u 20.5 35 0.00075 27.1 0.1 6 236-241 133-138 (158)
103 TIGR02722 lp_ uncharacterized 20.5 4.7E+02 0.01 21.5 7.0 43 109-151 141-186 (189)
104 PF03756 AfsA: A-factor biosyn 20.3 3.9E+02 0.0084 20.2 9.3 58 93-152 72-130 (132)
No 1
>PLN02864 enoyl-CoA hydratase
Probab=100.00 E-value=3.3e-56 Score=398.84 Aligned_cols=236 Identities=69% Similarity=1.067 Sum_probs=203.6
Q ss_pred CCCCCCCChhhhcCCccCCceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCC
Q 026221 1 MAKSSGINPELLLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGA 80 (241)
Q Consensus 1 ~~~~m~id~~~~iG~~~~~~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~ 80 (241)
|-...+||.++++|+++++.+++|+++|+++||+|||+++.+|.++++|+|+||+.++++|+|||||++++++.......
T Consensus 2 ~~~~~~~~~~~~~g~~~p~~~~~~~~~d~~lyAl~vG~~~~~~~d~~~l~~~ye~~g~~~~~a~PTf~~vl~~~~~~~~~ 81 (310)
T PLN02864 2 MPPISPFDPDLVLAHKFPEVTYSYTERDVALYALGVGACGRDAVDEDELKYVYHRDGQQFIKVLPTFASLFNLGSLDGFG 81 (310)
T ss_pred CCCCCCCCHHHHhCCcCCCeeEEECHHHHHHHHHhcCCCCCCCCChHHhhhhhccccCCCcccCCceeeeccccCccccc
Confidence 44566899999999999999999999999999999998667888899999999843348999999999999876532122
Q ss_pred CCCCCCCCCCCcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEeccCCC
Q 026221 81 IDLPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGF 160 (241)
Q Consensus 81 ~~~~~~~~d~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~gg~ 160 (241)
+.+|+++||+.++||+||+|++||||+++++|+++++|+++++||+|+++++++++.+.++|++||++++|+|+||.|||
T Consensus 82 ~~~p~~~~d~~~lVHgeq~i~~~rPlp~~~~l~~~~~v~~v~dkG~ga~v~~~~~~~d~~~Ge~v~t~~st~~~Rg~gg~ 161 (310)
T PLN02864 82 LDLPGLNYDPSLLLHGQQYIEIYKPIPSSASVRNKVSIAGLHDKGKAAILELETLSYEKDSGELLCMNRSTIFLRGAGGF 161 (310)
T ss_pred ccCCCCCCChhheeeccceEEEECCCCCCCEEEEEEEEEEEEeCCCcEEEEEEEEEEeCCCCcEEEEEEEEEEEeCCCCC
Confidence 46788999999999999999999999999999999999999999999999999998875689999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCccCCCCCCCCCcEEEEeeeCCcceeeeeecCCCCcCCCCHHHHHHcCCCCceEecceeee
Q 026221 161 SNSSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVN 236 (241)
Q Consensus 161 g~~~~p~~~~~~~~~~~~~~~~p~~~Pd~~~~~~~~~~qa~~yrlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~ 236 (241)
|+++.|....+++....+..+.|++.||++.+..+.++|+++||+|||+||||+|+++||.+||+++|+|||-+.+
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~p~~~pd~~~~~~t~~~~~~~a~lSGD~NPiH~d~~~A~~~gf~~~IaHGm~t~g 237 (310)
T PLN02864 162 SNSSQPFSYSNYPTNQVSAVKIPKSQPDAVFEDQTQPSQALLYRLSGDYNPLHSDPMFAKVAGFTRPILHGLCTLG 237 (310)
T ss_pred CCCCCCccccccccccccccCCCCCCCCeEEeeccChhHHHHHHhhCCCCcccCCHHHHhhCCCCCceeccHHHHH
Confidence 8876553211122222223457889999999999999999999999999999999999999999999999987643
No 2
>KOG1206 consensus Peroxisomal multifunctional beta-oxidation protein and related enzymes [Lipid transport and metabolism]
Probab=100.00 E-value=5e-39 Score=269.60 Aligned_cols=195 Identities=37% Similarity=0.575 Sum_probs=171.1
Q ss_pred EEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCCcceeeeeEEE
Q 026221 22 FTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQYME 101 (241)
Q Consensus 22 ~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~~lvHgeq~~~ 101 (241)
+.|+++|.|.||+++|+. ..|+.|+||++ ++|++.|||.+.+. .. ...++-+.-++|..+++||||.|+
T Consensus 6 f~~~tkd~I~y~lg~g~t------~kd~~~~yeN~--~dF~~lPt~~v~p~-~~--~~~~~~~~d~~~~~~~lhgeqy~e 74 (272)
T KOG1206|consen 6 FKYTTKDCILYALGLGAT------SKDLKYTYEND--PDFQVLPTFAVIPA-TA--TLLMDNLVDNFDYAMLLHGEQYFE 74 (272)
T ss_pred ccccHHHHHHHHhccccc------hhHHHHHhccC--ccceeccceeeehh-HH--HHHhhccchhHHHHHHHHHHHHHH
Confidence 789999999999999983 44899999999 99999999999983 22 112333334699999999999999
Q ss_pred EeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEeccCCCCCCCCCCCCCCCCCCCccCCC
Q 026221 102 LYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAGGFSNSSQPFSYSKYQTIPVSVVK 181 (241)
Q Consensus 102 ~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~gg~g~~~~p~~~~~~~~~~~~~~~ 181 (241)
...+++..+++.++.++.++-|||+|++++.-.+.++ ++|.+...+.++.|+||.+-|++++.+. ....++.
T Consensus 75 ~~~~l~~~g~l~t~~~~~~v~dkg~~a~v~~~~et~d-~~~k~i~~~~~stf~~g~~~~~~k~~~~-------~~~~av~ 146 (272)
T KOG1206|consen 75 LCTTLPSNGTLKTLAKVLDVLDKGSGALVVGNFETYD-ETGKLIAYNQGSTFIRGAGVFGGKRDGK-------RAKKAVQ 146 (272)
T ss_pred HHccccccchhhhcceeEEeccCcceeEEEeeeeeec-ccccchhhhcCceeEecccccCccccch-------hheeecc
Confidence 9999999999999999999999999999999999998 6999999999999999999998885431 1233455
Q ss_pred CCCCCCcEEEEeeeCCcceeeeeecCCCCcCCCCHHHHHHcCCCCceEecceee
Q 026221 182 IPKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGSVLNHNYKTELV 235 (241)
Q Consensus 182 ~p~~~Pd~~~~~~~~~~qa~~yrlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~ 235 (241)
.|.|.||++++..++.+|+.+||+||||||||+||+.|+++||+.+|+||+-+.
T Consensus 147 ~p~r~pd~~v~~~ts~DqaAlyrlsgD~NPLHiDPe~A~~agFetpilHGlc~l 200 (272)
T KOG1206|consen 147 VPHRDPDAVVERFTSEDQAALYRLSGDHNPLHIDPESALEAGFETPILHGLCTL 200 (272)
T ss_pred CCCcCcchheeecchhhHHHHHHhcCCCCccccCHHHHHhcCCCCchhhhHHHh
Confidence 889999999999999999999999999999999999999999999999998653
No 3
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=99.92 E-value=5.3e-25 Score=173.49 Aligned_cols=124 Identities=27% Similarity=0.499 Sum_probs=94.3
Q ss_pred hcCCccCCceEEecHHHHHHHHHhcCCCCCCCCCcccccceeccc----CccCcccCceehhhhccccCCCCCCCCCCCC
Q 026221 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHEN----GQQFIQVLPTFSALFSFELEPSGAIDLPGLQ 87 (241)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~----~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~ 87 (241)
.||+++++..++|++++|++||++||+ .+|+ |.++.. +.++++|||||++++++... ...+.++
T Consensus 2 ~iG~~~~~~~~~v~~~~i~~ya~avg~--~~p~------~~d~~~a~~~~~~~~~apPt~~~~~~~~~~----~~~~~~~ 69 (132)
T PF13452_consen 2 WIGREFEPVTYTVTRRDIRRYALAVGD--PNPL------YLDEEYARAAGHGGLIAPPTFAVVLAWPAP----AMFPDLG 69 (132)
T ss_dssp GTT-B-E-EEEEE-HHHHHHHHHHTT---CTTH------HHHCTSS--TTSTT-B--GGGHHHHHHHCC----GGCGCCS
T ss_pred CCccEeCCeeEEECHHHHHHHHHHhCc--CCcc------ccCHhHhhccCCCCcccCHHHHhhhhcccc----eeeecCC
Confidence 689999999999999999999999997 5552 333321 34789999999999998641 1125668
Q ss_pred CCCCcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEc---CCcEEEEEEEEEEecCCCcEEEEE
Q 026221 88 HDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDK---GKAAILEIETKSYNAESGELLCMN 148 (241)
Q Consensus 88 ~d~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dk---g~G~~v~~~~~~~~~~~Ge~V~~~ 148 (241)
+|+.++||++|+|+|||||++||+|+++++|+++++| |++.+++++++++| ++|++|+|+
T Consensus 70 ~~~~~~vh~~~~~~~h~Pl~~Gd~l~~~~~v~~v~~k~g~G~~~~v~~~~~~~~-~~Ge~v~t~ 132 (132)
T PF13452_consen 70 FDLTRLVHGEQDIEFHRPLRPGDTLTATSRVTDVYDKRGAGKGVFVTVETEYTD-QDGELVATQ 132 (132)
T ss_dssp S-GGGEEEEEEEEEESS--BSSEEEEEEEEEEEEEEES-TTSEEEEEEEEEEE--CTTEEEEE-
T ss_pred CChhhEEecCcEEEEeCCCCCCCEEEEEEEEEEEEEecCCCCEEEEEEEEEEEC-CCCCEEEeC
Confidence 9999999999999999999999999999999999999 46899999999998 799999985
No 4
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=99.87 E-value=2e-21 Score=159.75 Aligned_cols=147 Identities=14% Similarity=0.117 Sum_probs=117.7
Q ss_pred CCCChhhhcCCccCCce-EEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCC
Q 026221 5 SGINPELLLSQKLPEKT-FTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDL 83 (241)
Q Consensus 5 m~id~~~~iG~~~~~~~-~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~ 83 (241)
|+||.+ +||++|++.. +++++++|++||.++|+ .||++-++ .|.- ..+..+++|||||+.++...... ..+..
T Consensus 1 ~~~~~~-~~g~~~~~~~~~~Vt~~~I~~FA~~~GD--~nPlH~D~-eyA~-~s~fg~~IApgt~~~~~~~~~~~-~~~~~ 74 (166)
T PRK13691 1 MALKTD-IRGMVWRYPDYFVVGREQIRQFARAVKC--DHPAFFSE-DAAA-ELGYDALVAPLTFVTIFAKYVQL-DFFRH 74 (166)
T ss_pred CCCChh-hCccCcCCCCCeEECHHHHHHHHHHHCC--CCCcccCH-HHHH-hCCCCCcccCHHHHHHHHHHhcc-ccccc
Confidence 899997 9999999986 59999999999999997 78874322 2221 11468899999998666543211 11223
Q ss_pred CCCCCCCCcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEeccC
Q 026221 84 PGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAG 158 (241)
Q Consensus 84 ~~~~~d~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~g 158 (241)
..++++..+++|++|+|+|++|+.+||+|+++.+|.++.+++++.++++++++.| ++||+|++.+++++.|...
T Consensus 75 ~~~g~~~~~~v~~~q~~~f~rPV~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~~N-Q~Ge~V~~~~~~~~~~~~~ 148 (166)
T PRK13691 75 VDVGMETMQIVQVDQRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNVCTN-DDGELVMEAYTTLMGQQGD 148 (166)
T ss_pred cccCCCcceeeeeeeEEEEeCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEC-CCCCEEEEEEEEEEEecCC
Confidence 3467888889999999999999999999999999999987765567899999988 7999999999999998644
No 5
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=99.83 E-value=1.7e-19 Score=147.27 Aligned_cols=146 Identities=13% Similarity=0.194 Sum_probs=117.9
Q ss_pred CCCChhhhcCCccCCc-eEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCC
Q 026221 5 SGINPELLLSQKLPEK-TFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDL 83 (241)
Q Consensus 5 m~id~~~~iG~~~~~~-~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~ 83 (241)
|+||.+ .+|.+|... ..++++++|+.||.++|+ .||+.-++ .|.-. .+..+.+|+|+|++++++.... .....
T Consensus 1 ~~~~~~-~vG~~~~~~~~~tvt~~dI~~FA~~~GD--~nPlh~D~-e~A~~-~~fg~~iA~~~~~~~~gl~~~~-~~~~~ 74 (159)
T PRK13692 1 MALSAD-IVGMHYRYPDHYEVEREKIREYAVAVQN--DDAAYFEE-DAAAE-LGYKGLLAPLTFICVFGYKAQS-AFFKH 74 (159)
T ss_pred CCCChh-HceeEcCCCCceEeCHHHHHHHHHHHCC--CCCCccCH-HHHHh-cCCCCcccChHHHHHhhhhhhh-hhhhc
Confidence 789996 999999986 789999999999999997 77863222 12211 1357889999998887765421 11233
Q ss_pred CCCCCCCCcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEecc
Q 026221 84 PGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (241)
Q Consensus 84 ~~~~~d~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~ 157 (241)
..++++..+.||++|+++|++|+.+||+|+++.+|.++++++...+++++++++| ++|++|++.++++++|+.
T Consensus 75 ~~l~~~~~~~~~~~q~~~f~~PV~~GDtL~~~~eV~~~~~~~~~giv~~~~~v~N-q~Ge~V~~~~~~~~~r~~ 147 (159)
T PRK13692 75 ANIAVADAQIVQVDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVTN-EEGDVVQETYTTLAGRAG 147 (159)
T ss_pred ccCCCCccceEeeeeEEEEeCCccCCCEEEEEEEEEEEEEcCCceEEEEEEEEEc-CCCCEEEEEEEEEEEecC
Confidence 5667877899999999999999999999999999999887655578888999888 799999999999999974
No 6
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=99.54 E-value=1.5e-15 Score=118.87 Aligned_cols=54 Identities=52% Similarity=0.610 Sum_probs=51.1
Q ss_pred CCCCCcEEEEeeeCCcceeeeeecCCCCcCCCCHHHHHHcCCCCceEecceeee
Q 026221 183 PKSQPFAVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVN 236 (241)
Q Consensus 183 p~~~Pd~~~~~~~~~~qa~~yrlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~ 236 (241)
|.|+||++++..++++|.++|++|||+||||+|+++||..||+++|+||+.+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~SgD~nPiH~d~e~A~~~g~~~~iahG~~t~a 54 (122)
T cd03448 1 PDRAPDAVVEIPTSPDQALLYRLSGDYNPLHIDPAFAKAAGFPRPILHGLCTYG 54 (122)
T ss_pred CCCCCCEEEEecCCcChHHHHHHhCCCCccccCHHHHHHcCCCCceehhHHHHH
Confidence 578999999999999999999999999999999999999999999999997654
No 7
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=99.45 E-value=7.6e-13 Score=106.99 Aligned_cols=142 Identities=13% Similarity=0.107 Sum_probs=101.4
Q ss_pred CCCCChhhhcCCccCCce-EEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCC
Q 026221 4 SSGINPELLLSQKLPEKT-FTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAID 82 (241)
Q Consensus 4 ~m~id~~~~iG~~~~~~~-~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~ 82 (241)
+|. |..+++|.+++... .+++++|+++||.++|+ .||++-++- |.-+ .+.++.+|+++|...+.......+ +.
T Consensus 4 ~~~-~~~~~vG~~~~~~~~~~vt~~di~~FA~~sgD--~nPiH~D~e-~A~~-~gfg~~Ia~G~~t~sl~~~l~~~~-~~ 77 (149)
T cd03450 4 SLA-DLAALVGQELGVSDWVTVDQERIDQFADATGD--HQWIHVDPE-RAAA-EPFGGTIAHGFLTLSLLPALTPQL-FR 77 (149)
T ss_pred CHH-HHHHhCCCCcCCCCCEEECHHHHHHHHHhhCC--CCccccCHH-HHhh-CCCCCeEECHHHHHHHHHHHHHhc-cc
Confidence 444 66679999998765 68999999999999997 788633221 2111 145788999988777765432111 11
Q ss_pred CCCCCCCCCcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCc-EEEEEEEEEEecCCCcEEEEEEEEEEE
Q 026221 83 LPGLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKA-AILEIETKSYNAESGELLCMNRMTAFL 154 (241)
Q Consensus 83 ~~~~~~d~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G-~~v~~~~~~~~~~~Ge~V~~~~st~~~ 154 (241)
.++. ..+..+++|+++|++|+.+||+|+++.+|.+++++.++ ..++++.++.-.....++|..++-+++
T Consensus 78 ~~~~---~~~~~~g~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 147 (149)
T cd03450 78 VEGV---KMGVNYGLDKVRFPAPVPVGSRVRGRFTLLSVEELKGGGVQVTLEVTVEIEGEDKPACVAEWISRL 147 (149)
T ss_pred CCCc---eEEEEeeccEEEeCcceeCCcEEEEEEEEEEEEEcCCCeEEEEEEEEEEEeCCCCceEEEEEEEee
Confidence 1111 11345789999999999999999999999999998765 888888887653455688888776553
No 8
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=99.45 E-value=1.1e-12 Score=104.98 Aligned_cols=134 Identities=16% Similarity=0.117 Sum_probs=100.4
Q ss_pred hcCCccCCceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCC
Q 026221 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (241)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~ 91 (241)
-+|.+++....++++.+|+.||.+.|+ .||++-++- |.-. .+.++.+|+++|...+...... . ..++ ..
T Consensus 6 ~vG~~~~~~~~tvt~~~i~~Fa~~tgD--~nPiH~D~e-~A~~-~~fg~~ia~G~l~~s~~~~l~~-~--~~~~----~~ 74 (142)
T cd03452 6 RPGDSLLTHRRTVTEADIVNFACLTGD--HFYAHMDEI-AAKA-SFFGKRVAHGYFVLSAAAGLFV-D--PAPG----PV 74 (142)
T ss_pred CCCCEEeeCCEEEcHHHHHHHHHhhCC--CCccccCHH-HHhh-CCCCCeeecHHHHHHHHhhhCc-c--CCcc----cE
Confidence 479998766789999999999999997 788743222 2211 1357889999888777765421 1 1111 11
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcC--CcEEEEEEEEEEecCCCcEEEEEEEEEEEecc
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKG--KAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg--~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~ 157 (241)
..-|+.|+++|++|+.+||+|+++.+|.+++++. +..++++++++.| ++|+.|++.+.+++++..
T Consensus 75 ~~~~g~~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n-q~g~~V~~~~~~~~~~~~ 141 (142)
T cd03452 75 LANYGLENLRFLEPVYPGDTIQVRLTCKRKIPRDGQDYGVVRWDAEVTN-QNGELVASYDILTLVAKK 141 (142)
T ss_pred EEEeccceEEECCCCCCCCEEEEEEEEEEEeecCCCCcEEEEEEEEEEe-cCCCEEEEEEehHeeEec
Confidence 1237899999999999999999999999998764 3467888999888 799999999998888754
No 9
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.43 E-value=2.7e-12 Score=101.70 Aligned_cols=132 Identities=17% Similarity=0.184 Sum_probs=95.9
Q ss_pred hcCCccCCceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCC
Q 026221 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (241)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~ 91 (241)
-+|.++...+.++++.+++.||.+.|+ .||++-++- |.-. .+..+.+||++|...+...... ..+... .-.
T Consensus 6 ~vG~~~~~~~~tvt~~~i~~fa~~~gD--~np~H~D~~-~A~~-~~~~~~ia~G~~~~a~~~~~~~----~~~~~~-~~~ 76 (140)
T cd03446 6 EIGQVFESVGRTVTEADVVMFAGLSGD--WNPIHTDAE-YAKK-TRFGERIAHGLLTLSIATGLLQ----RLGVFE-RTV 76 (140)
T ss_pred cCCCEeccCCEEECHHHHHHHHHhhCC--CcccccCHH-HHcc-CCCCCceeccccHHHHHhhHhh----hccccc-cee
Confidence 479998767789999999999999997 788643222 1111 1356788888877655543311 111110 111
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcC--CcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKG--KAAILEIETKSYNAESGELLCMNRMTAF 153 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg--~G~~v~~~~~~~~~~~Ge~V~~~~st~~ 153 (241)
...++.++++|++|+.+||+|+++.+|.+++++. +..++++++++.| ++|++|++.+.+++
T Consensus 77 ~~~~g~~~~~f~~pv~~GD~l~~~~~v~~~~~~~~~~~~~v~~~~~~~n-q~g~~v~~~~~~~l 139 (140)
T cd03446 77 VAFYGIDNLRFLNPVFIGDTIRAEAEVVEKEEKDGEDAGVVTRRIEVVN-QRGEVVQSGEMSLL 139 (140)
T ss_pred eEEeccceEEEcCCCCCCCEEEEEEEEEEecccCCCCceEEEEEEEEEc-CCCCEEEEEEEeee
Confidence 2468899999999999999999999999998764 3467888999888 79999999998775
No 10
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.41 E-value=2e-12 Score=102.71 Aligned_cols=133 Identities=16% Similarity=0.158 Sum_probs=94.3
Q ss_pred hcCCccCCceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCC
Q 026221 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (241)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~ 91 (241)
.+|..+....+++++.++++||.+ |+ .||++-++- |-- ..+..+.+|++++...+...... ... ++.+..
T Consensus 5 ~vG~~~~~~~~~vt~~~v~~Fa~~-~D--~npih~D~e-~A~-~~~~~~~ia~g~~~~~~~~~~~~-~~~----~~~~~~ 74 (140)
T cd03454 5 VIGQRFTSGSYTVTEEEIIAFARE-FD--PQPFHLDEE-AAK-ESLFGGLAASGWHTAAITMRLLV-DAG----LSGSAS 74 (140)
T ss_pred CCccEEEeCCEEEcHHHHHHHHHc-cC--CCccCcCHH-HHh-cCCCCCeeechHHHHHHHHHhhh-hhc----cccceE
Confidence 478888776789999999999997 86 788643221 211 11357788988444333322210 000 111123
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEc-C--CcEEEEEEEEEEecCCCcEEEEEEEEEEEe
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDK-G--KAAILEIETKSYNAESGELLCMNRMTAFLR 155 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dk-g--~G~~v~~~~~~~~~~~Ge~V~~~~st~~~r 155 (241)
...|+.|+++|++|+.+||+|+++++|.+++++ + +..++++++++.| ++|++|++.+.+++++
T Consensus 75 ~~~~~~~~~~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~~v~~~~~~~n-q~g~~v~~~~~~~~~~ 140 (140)
T cd03454 75 GGSPGIDELRWPRPVRPGDTLSVEVEVLDKRPSRSRPDRGIVTLRSETLN-QRGEVVLTFEATVLVR 140 (140)
T ss_pred EEEcceeeeEeCCCCCCCCEEEEEEEEEEEeecCCCCCCeEEEEEEEEEc-CCCCEEEEEEehheeC
Confidence 567888999999999999999999999999975 2 2356888999888 7999999999988764
No 11
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=99.39 E-value=4.7e-12 Score=101.01 Aligned_cols=133 Identities=18% Similarity=0.182 Sum_probs=98.1
Q ss_pred hcCCccCC-ceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCC
Q 026221 12 LLSQKLPE-KTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDP 90 (241)
Q Consensus 12 ~iG~~~~~-~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~ 90 (241)
-+|.+++. ...+++++++++||.++|+ .||++-++- |.- .++.++.+||++|.+.+...... . ..++ -
T Consensus 8 ~vG~~~~~~~~~tvt~~~i~~fa~~~gd--~~piH~D~~-~a~-~~~~~~~ia~G~l~~~~~~~~~~-~--~~~~----~ 76 (146)
T cd03451 8 TVGQVFEHAPGRTVTEADNVLFTLLTMN--TAPLHFDAA-YAA-KTEFGRRLVNSLFTLSLALGLSV-N--DTSL----T 76 (146)
T ss_pred CCccEEecCCCeEEcHHHHHHHHHhhCC--CCccccCHH-HHh-hCCCCCccccHHhHHHHHhhhee-h--hccc----c
Confidence 57999874 4678999999999999997 788643322 211 11457899999888776654311 1 0111 1
Q ss_pred CcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEc-C--CcEEEEEEEEEEecCCCcEEEEEEEEEEEec
Q 026221 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDK-G--KAAILEIETKSYNAESGELLCMNRMTAFLRG 156 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dk-g--~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg 156 (241)
.....+.++++|++|+.+||+|+++.+|++++++ + +..++++++++.+ ++|++|++.+.+++++.
T Consensus 77 ~~~~~~~~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~~~~v~~~~~~~n-q~g~~V~~~~~~~~~~~ 144 (146)
T cd03451 77 AVANLGYDEVRFPAPVFHGDTLYAESEVLSKRESKSRPDAGIVTVRTVGYN-QDGEPVLSFERTALVPK 144 (146)
T ss_pred ceeccCccEEEecCCCCCCCEEEEEEEEEEEecCCCCCCCeEEEEEEEEEC-CCCCEEEEEEehhEEEc
Confidence 1223555799999999999999999999999975 2 3478888999887 79999999999998874
No 12
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=99.29 E-value=3.8e-11 Score=94.04 Aligned_cols=125 Identities=15% Similarity=0.173 Sum_probs=91.7
Q ss_pred cCCccCCceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCCc
Q 026221 13 LSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRL 92 (241)
Q Consensus 13 iG~~~~~~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~~ 92 (241)
+|..+++...+++++++++||...|+ .||++-++- |.-. .++++.+++++|...+.......+ + + +...
T Consensus 1 vG~~~~~~~~~vt~~~i~~fa~~sgD--~npiH~D~~-~A~~-~g~~~~i~~G~~~~~~~~~~~~~~-~--~----~~~~ 69 (127)
T cd03453 1 VGDELPPLTPPVSRADLVRYAGASGD--FNPIHYDED-FAKK-VGLPGVIAHGMLTMGLLGRLVTDW-V--G----DPGR 69 (127)
T ss_pred CCccCCceeeecCHHHHHHHHHhhcC--CCccccCHH-HHHH-cCCCCcEecHHHHHHHHHHHHHHH-c--C----Cccc
Confidence 58889888899999999999999997 788643222 2211 145778888877766654432111 1 1 2334
Q ss_pred ceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEE
Q 026221 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMT 151 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st 151 (241)
++ +++++|++|+.+||+|+++.+|.+++.++...++++++++.| ++|+.|++.+.+
T Consensus 70 i~--~~~~rf~~Pv~~Gdtl~~~~~v~~~~~~~~~~~v~~~~~~~n-q~g~~v~~g~a~ 125 (127)
T cd03453 70 VV--SFGVRFTKPVPVPDTLTCTGIVVEKTVADGEDALTVTVDATD-QAGGKKVLGRAI 125 (127)
T ss_pred eE--EEEEEECCcCcCCCEEEEEEEEEEEEecCCCcEEEEEEEEEE-cCCCEEEEEEEE
Confidence 43 567999999999999999999999987653357888999888 799999887754
No 13
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=99.28 E-value=6.5e-11 Score=91.81 Aligned_cols=125 Identities=15% Similarity=0.114 Sum_probs=92.5
Q ss_pred cCCccCCceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCCc
Q 026221 13 LSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRL 92 (241)
Q Consensus 13 iG~~~~~~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~~ 92 (241)
+|.++ ....++++.+++.||..+|+ .||++-++- |.-. .+.++.+++++|...+...... . . ++-.+
T Consensus 3 ~G~~~-~~~~tv~~~~~~~fa~~~gd--~npiH~D~~-~A~~-~g~~~~i~~g~~~~~~~~~~~~-~--~-----~~g~~ 69 (128)
T cd03449 3 VGDSA-SLTRTITEEDVELFAELSGD--FNPIHLDEE-YAKK-TRFGGRIAHGMLTASLISAVLG-T--L-----LPGPG 69 (128)
T ss_pred CCCEE-EEEEEEcHHHHHHHHHHhCC--CCCccCCHH-HHhh-CCCCCceecHHHHHHHHHHHHh-c--c-----CCCce
Confidence 57777 56789999999999999997 778643322 1111 1347788888888776544311 0 1 11245
Q ss_pred ceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 026221 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~ 153 (241)
.++++++++|++|+.+||+|+++++|.++.++ + .+++++.++++ ++|++|++.+.+++
T Consensus 70 ~~~~~~~~~f~~Pv~~gd~l~~~~~v~~~~~~-~-~~v~~~~~~~~-~~g~~v~~g~~~~~ 127 (128)
T cd03449 70 TIYLSQSLRFLRPVFIGDTVTATVTVTEKRED-K-KRVTLETVCTN-QNGEVVIEGEAVVL 127 (128)
T ss_pred EEEEEEEEEECCCccCCCEEEEEEEEEEEecC-C-CEEEEEEEEEe-CCCCEEEEEEEEEe
Confidence 68999999999999999999999999998753 2 36677888887 58999999998875
No 14
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=99.19 E-value=3.9e-10 Score=87.07 Aligned_cols=122 Identities=20% Similarity=0.211 Sum_probs=90.0
Q ss_pred CCceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCCcceeee
Q 026221 18 PEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQ 97 (241)
Q Consensus 18 ~~~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~~lvHge 97 (241)
.....++++.+++.||.++|+ .||++-++- |.-. .+.++.++++.|...+...... . ..++ ....++++
T Consensus 4 ~~~~~~~~~~~~~~fa~~~gd--~npiH~d~~-~A~~-~~~~~~i~~g~~~~~~~~~~~~-~--~~~~----~~~~~~~~ 72 (127)
T cd03441 4 DSSGRTVTEADIALFARLSGD--PNPIHVDPE-YAKA-AGFGGRIAHGMLTLSLASGLLV-Q--WLPG----TDGANLGS 72 (127)
T ss_pred eEcceEcCHHHHHHHHHHhCC--CCccccCHH-HHHh-CCCCCceechHHHHHHHHhhhh-h--hccC----cccceeEE
Confidence 344689999999999999997 788632221 1111 1357789999888877765421 1 1111 25679999
Q ss_pred eEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEE
Q 026221 98 QYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMT 151 (241)
Q Consensus 98 q~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st 151 (241)
++++|++|+.+||+|+++.+|.+..++.+..+++++++..+ ++|++|+..+.+
T Consensus 73 ~~~~f~~Pv~~Gd~l~~~~~v~~~~~~~~~~~v~~~~~~~n-~~g~~v~~g~~~ 125 (127)
T cd03441 73 QSVRFLAPVFPGDTLRVEVEVLGKRPSKGRGVVTVRTEARN-QGGEVVLSGEAT 125 (127)
T ss_pred eEEEEeCCcCCCCEEEEEEEEEEeeccCCCcEEEEEEEEEe-CCCCEEEEEEEE
Confidence 99999999999999999999999988754456778888887 689998886554
No 15
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=99.15 E-value=1.4e-11 Score=96.81 Aligned_cols=49 Identities=24% Similarity=0.203 Sum_probs=43.1
Q ss_pred EEEEeeeCCcceeeeeecCCCCcCCCCHHHHHHcCCCCceEecceeeee
Q 026221 189 AVFEDYTQPSQALVYRLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVNY 237 (241)
Q Consensus 189 ~~~~~~~~~~qa~~yrlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~~ 237 (241)
+.+.+.++.+...++++|||+||||+|+++||..||+++|+||+.+.+.
T Consensus 5 ~~~~~~t~~d~~~fa~lsGD~nPiH~D~~~A~~~g~~~~iahG~l~~~~ 53 (126)
T cd03447 5 ASLTITAPASNEPYARVSGDFNPIHVSRVFASYAGLPGTITHGMYTSAA 53 (126)
T ss_pred ceEEEEChHHHHHHHHHhCCCCccCCCHHHHHHcCCCCCeechhHHHHH
Confidence 4567778888888889999999999999999999999999999976543
No 16
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=99.12 E-value=2e-12 Score=100.68 Aligned_cols=55 Identities=22% Similarity=0.166 Sum_probs=41.9
Q ss_pred CCCCCcEEEEeeeCCcceeee-eecCCCCcCCCCHHHHHHcCCCCceEecceeeee
Q 026221 183 PKSQPFAVFEDYTQPSQALVY-RLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVNY 237 (241)
Q Consensus 183 p~~~Pd~~~~~~~~~~qa~~y-rlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~~ 237 (241)
+...++.+....+++++...| ++|||+||||+|+++|+..||+++|+||+.+.+.
T Consensus 6 ~g~~~~~~~~~tit~~~~~~fa~~sgD~nPiH~D~~~A~~~gf~~~ivhG~~~~a~ 61 (122)
T PF01575_consen 6 IGQGIRHSRSRTITEADIRQFAALSGDFNPIHVDPEYARATGFGGPIVHGMLTLAL 61 (122)
T ss_dssp TTSEEEEEEEEEEEHHHHHHHHHHHT---HHHH-HHHHHTSTTSSSB-BHHHHHHH
T ss_pred CCCccccccCEEECHHHHHHHHHhhCCCCcceecHHHHhhcCCCCEEEccHHHHHH
Confidence 344556777788888888888 5799999999999999999999999999987654
No 17
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=99.12 E-value=6e-10 Score=86.67 Aligned_cols=122 Identities=13% Similarity=0.087 Sum_probs=88.7
Q ss_pred CCccCCceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCCcc
Q 026221 14 SQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLL 93 (241)
Q Consensus 14 G~~~~~~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~~l 93 (241)
|..+++.+.++++.++++||.+.|+ .||++-++ .|--.. ++++.+++.+|...+.......+ + + .+.
T Consensus 1 g~~~~~~~~~vt~~~i~~fa~~s~D--~~piH~D~-~~A~~~-g~~~~ia~G~~~~~~~~~~~~~~-~-----~---~~~ 67 (123)
T cd03455 1 GDELPRLSIPPDPTLLFRYSAATRD--FHRIHHDR-DYARAV-GYPDLYVNGPTLAGLVIRYVTDW-A-----G---PDA 67 (123)
T ss_pred CCcCCcEEecCCHHHHHHHHhhcCC--CCcccCCH-HHHHhc-CCCceEEEHHHHHHHHHHHHHHc-c-----C---Ccc
Confidence 4567888899999999999999997 77863222 122111 45778888877776665432111 1 1 123
Q ss_pred eeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEE
Q 026221 94 LHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTA 152 (241)
Q Consensus 94 vHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~ 152 (241)
...+++++|++|+.+||+|+++.+|.+.++ ++ +++++.++.| ++|+.|++.+.++
T Consensus 68 ~~~~~~~rf~~pv~~Gdtl~~~~~v~~~~~-~~--~v~~~~~~~n-q~G~~v~~g~a~v 122 (123)
T cd03455 68 RVKSFAFRLGAPLYAGDTLRFGGRVTAKRD-DE--VVTVELWARN-SEGDHVMAGTATV 122 (123)
T ss_pred eEEEEEEEeeccccCCCEEEEEEEEEeecc-Cc--EEEEEEEEEc-CCCCEEEeEEEEE
Confidence 445789999999999999999999998753 23 8889999887 7999999887664
No 18
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=99.02 E-value=2.6e-09 Score=101.15 Aligned_cols=130 Identities=13% Similarity=0.169 Sum_probs=96.3
Q ss_pred hcCCccCCceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCC
Q 026221 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (241)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~ 91 (241)
-+|.++. ...++|+++++.||...|+ .||++-++- |--. .++++.+|+++|...+...... ...+ -.
T Consensus 15 ~vG~~~~-~~rtvT~~di~~FA~lsGD--~nPiH~D~e-~Ak~-sgfg~~IahG~l~~s~~~~l~~---~~~~-----g~ 81 (466)
T PRK08190 15 AIGDSAS-LVRTLTPDDIELFAAMSGD--VNPAHLDAA-YAAS-DGFHHVVAHGMWGGALISAVLG---TRLP-----GP 81 (466)
T ss_pred CCCCEEe-eeEEecHHHHHHHHHHhCC--CCCCCcCHH-HHHh-CCCCCceeCHHHHHHHHHHHHh---hhCC-----Cc
Confidence 3788874 5689999999999999997 788643222 1111 1457889999887666543211 1112 13
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEecc
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~ 157 (241)
+.+|++|+++|++|+.+||+|+++.+|.+.+. ++ .+++++++++| ++|++|++.+.+++++..
T Consensus 82 ~~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~-~~-~~v~~~~~~~n-q~G~~V~~g~~~~l~~~~ 144 (466)
T PRK08190 82 GTIYLGQSLRFRRPVRIGDTLTVTVTVREKDP-EK-RIVVLDCRCTN-QDGEVVITGTAEVIAPTE 144 (466)
T ss_pred ceEEEEEEEEEeCCcCCCCEEEEEEEEEEEEC-CC-CEEEEEEEEEe-CCCCEEEEEEEEeecccc
Confidence 57899999999999999999999999998653 33 46778888888 799999999999987644
No 19
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=98.92 E-value=6.4e-09 Score=102.37 Aligned_cols=131 Identities=17% Similarity=0.138 Sum_probs=96.0
Q ss_pred hcCCccCCceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCC
Q 026221 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (241)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~ 91 (241)
-+|.+++....++|++||+.||...|+ .+|++-++ .|..+ .++++.+|+++|...+...... . ..++ - .
T Consensus 529 ~VG~~~~~~~~tvt~~dI~~FA~~sgD--~nPiH~D~-e~A~~-s~fg~~Ia~G~l~~sl~~~l~~-~--~~~~--~--~ 597 (663)
T TIGR02278 529 EIGDSLTTHRRTVTEADIALFAALSGD--HFYAHMDE-IAARE-SFFGKRVAHGYFVLSAAAGLFV-D--PAPG--P--V 597 (663)
T ss_pred CCCCCcCCCCeEEcHHHHHHHHHhhCC--CCcccCCH-HHHhh-CCCCCceeCHHHHHHHHHHHhh-c--cCcc--c--h
Confidence 479998777789999999999999997 78874322 22222 1357788988887666544311 1 1111 1 1
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCC--cEEEEEEEEEEecCCCcEEEEEEEEEEE
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGK--AAILEIETKSYNAESGELLCMNRMTAFL 154 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~--G~~v~~~~~~~~~~~Ge~V~~~~st~~~ 154 (241)
..-|+.|+++|++|+.+||+|+++.+|++++++.+ ..++++++++.+ ++|++|++.+.++++
T Consensus 598 ~~~~g~~~~rF~~PV~~GDtl~~~~~V~e~~~~~~~~~g~v~~~~~v~n-q~G~~Vl~~~~~~lv 661 (663)
T TIGR02278 598 LANYGLENLRFLEPVGPGDTIQVRLTVKRKTPRDEKTYGVVEWAAEVVN-QNGEPVATYDVLTLV 661 (663)
T ss_pred hhhcccceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEc-CCCCEEEEEEEHHhc
Confidence 12278999999999999999999999999987643 247888888887 799999999887654
No 20
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=98.86 E-value=5.1e-10 Score=89.74 Aligned_cols=43 Identities=26% Similarity=0.278 Sum_probs=36.4
Q ss_pred eeCCcceeee-eecCCCCcCCCCHHHHHHcCCCCceEecceeee
Q 026221 194 YTQPSQALVY-RLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVN 236 (241)
Q Consensus 194 ~~~~~qa~~y-rlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~ 236 (241)
.++.++-..| ++|||+||||+|+++|+..||+++|+||+.+.+
T Consensus 21 tvt~~di~~FA~~sgD~nPiH~D~~~A~~~g~~~~iahG~~~~a 64 (142)
T PRK13693 21 PLTRQDLVNYAGVSGDLNPIHWDDEIAKVVGLDTAIAHGMLTMG 64 (142)
T ss_pred eeCHHHHHHHHHHhCCCCccccCHHHHHhcCCCCcEecHHHHHH
Confidence 3555665555 789999999999999999999999999997644
No 21
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=98.79 E-value=8.2e-10 Score=90.15 Aligned_cols=45 Identities=27% Similarity=0.271 Sum_probs=39.5
Q ss_pred EeeeCCcceeeeeecCCCCcCCCCHHHHHH-cCCCCceEecceeee
Q 026221 192 EDYTQPSQALVYRLSGDYNPLHSDPMVAKA-AGSVLNHNYKTELVN 236 (241)
Q Consensus 192 ~~~~~~~qa~~yrlSGD~NPiH~d~~~Ak~-~Gf~~~i~h~~~~~~ 236 (241)
...++.++.++++++||+||||+|+++|+. ++|+++|+||+-+.+
T Consensus 32 ~~~t~~d~~~fa~~tgD~qpiH~D~e~A~~~~~fg~~iahG~~t~a 77 (159)
T COG2030 32 RTVTEADIVLFAAVTGDPNPIHLDPEAAKKTSGFGGPIAHGMLTLA 77 (159)
T ss_pred eEecHHHHHHHHHhcCCCCceecCHHHHhccCCCCCEehhHHHHHH
Confidence 455777888888999999999999999999 799999999987644
No 22
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=98.78 E-value=3.5e-08 Score=97.44 Aligned_cols=132 Identities=16% Similarity=0.098 Sum_probs=96.3
Q ss_pred hcCCccCCceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCC
Q 026221 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (241)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~ 91 (241)
-+|++++....++|+++|+.||...|+ .||++-++- |... .++++.+|+++|...+.......+ .++..+
T Consensus 541 ~vG~~~~~~~~tvt~~di~~FA~lsgD--~nPiH~D~e-~A~~-~~fg~~ia~G~l~~sl~~~l~~~~---~~~~~~--- 610 (675)
T PRK11563 541 RIGDSLLTARRTVTEADIVNFACLSGD--TFYAHMDEI-AAAA-NFFGGRVAHGYFVLSAAAGLFVDP---APGPVL--- 610 (675)
T ss_pred CCCCEeccCCEEEcHHHHHHHHHhhCC--CCccccCHH-HHhh-CCCCCceeCHHHHHHHHHHHhhcc---Cccchh---
Confidence 479998766789999999999999997 788743222 2211 135788999988777665542101 111100
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCC--cEEEEEEEEEEecCCCcEEEEEEEEEEEe
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGK--AAILEIETKSYNAESGELLCMNRMTAFLR 155 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~--G~~v~~~~~~~~~~~Ge~V~~~~st~~~r 155 (241)
.-.+-+.++|++|+.+||+|+++.+|.+++++.+ ..++++++++.+ ++|++|++.+.++++|
T Consensus 611 -~~~g~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n-q~G~~V~~~~~~~lv~ 674 (675)
T PRK11563 611 -ANYGLENLRFLTPVKPGDTIQVRLTCKRKTPRRQAPYGVVRWDVEVTN-QDGELVATYDILTLVA 674 (675)
T ss_pred -hhcccceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEE-CCCCEEEEEEEHHhcc
Confidence 1134578999999999999999999999987643 357888999888 7999999999877654
No 23
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=98.73 E-value=3.7e-09 Score=82.22 Aligned_cols=42 Identities=21% Similarity=0.266 Sum_probs=34.6
Q ss_pred eCCcceeee-eecCCCCcCCCCHHHHHHcCCCCceEecceeee
Q 026221 195 TQPSQALVY-RLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVN 236 (241)
Q Consensus 195 ~~~~qa~~y-rlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~ 236 (241)
++...-..| ++|||+||||+|+++|+..||+++|+||+.+.+
T Consensus 11 vt~~~i~~fa~~s~D~~piH~D~~~A~~~g~~~~ia~G~~~~~ 53 (123)
T cd03455 11 PDPTLLFRYSAATRDFHRIHHDRDYARAVGYPDLYVNGPTLAG 53 (123)
T ss_pred CCHHHHHHHHhhcCCCCcccCCHHHHHhcCCCceEEEHHHHHH
Confidence 344444444 689999999999999999999999999987654
No 24
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=98.69 E-value=6.8e-09 Score=80.40 Aligned_cols=44 Identities=23% Similarity=0.216 Sum_probs=36.2
Q ss_pred EeeeCCcceeee-eecCCCCcCCCCHHHHHHcCCCCceEecceee
Q 026221 192 EDYTQPSQALVY-RLSGDYNPLHSDPMVAKAAGSVLNHNYKTELV 235 (241)
Q Consensus 192 ~~~~~~~qa~~y-rlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~ 235 (241)
...++..+.+.| ++|||+||||+|+++|+..||+++|+||+-+.
T Consensus 10 ~~tv~~~~~~~fa~~~gd~npiH~D~~~A~~~g~~~~i~~g~~~~ 54 (128)
T cd03449 10 TRTITEEDVELFAELSGDFNPIHLDEEYAKKTRFGGRIAHGMLTA 54 (128)
T ss_pred EEEEcHHHHHHHHHHhCCCCCccCCHHHHhhCCCCCceecHHHHH
Confidence 334555555445 89999999999999999999999999998654
No 25
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=98.68 E-value=5.6e-09 Score=81.70 Aligned_cols=42 Identities=24% Similarity=0.188 Sum_probs=34.5
Q ss_pred eCCcce-eeeeecCCCCcCCCCHHHHHHcCCCCceEecceeee
Q 026221 195 TQPSQA-LVYRLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVN 236 (241)
Q Consensus 195 ~~~~qa-~~yrlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~ 236 (241)
++.+.. .+.++|||+||||+|+++||..||+++|+||+-+.+
T Consensus 12 vt~~~i~~fa~~sgD~npiH~D~~~A~~~g~~~~i~~G~~~~~ 54 (127)
T cd03453 12 VSRADLVRYAGASGDFNPIHYDEDFAKKVGLPGVIAHGMLTMG 54 (127)
T ss_pred cCHHHHHHHHHhhcCCCccccCHHHHHHcCCCCcEecHHHHHH
Confidence 344444 444799999999999999999999999999986543
No 26
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=98.65 E-value=6.1e-09 Score=83.26 Aligned_cols=42 Identities=19% Similarity=0.089 Sum_probs=35.2
Q ss_pred eCCcceeee-eecCCCCcCCCCHHHHHHcCCCCceEecceeee
Q 026221 195 TQPSQALVY-RLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVN 236 (241)
Q Consensus 195 ~~~~qa~~y-rlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~ 236 (241)
++..+-..| ++|||+||||+|+++||..||+++||||+-+.+
T Consensus 18 vt~~~i~~Fa~~tgD~nPiH~D~e~A~~~~fg~~ia~G~l~~s 60 (142)
T cd03452 18 VTEADIVNFACLTGDHFYAHMDEIAAKASFFGKRVAHGYFVLS 60 (142)
T ss_pred EcHHHHHHHHHhhCCCCccccCHHHHhhCCCCCeeecHHHHHH
Confidence 445554445 789999999999999999999999999987654
No 27
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=98.57 E-value=9.6e-09 Score=79.24 Aligned_cols=42 Identities=40% Similarity=0.416 Sum_probs=35.2
Q ss_pred eCCcc-eeeeeecCCCCcCCCCHHHHHHcCCCCceEecceeee
Q 026221 195 TQPSQ-ALVYRLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVN 236 (241)
Q Consensus 195 ~~~~q-a~~yrlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~ 236 (241)
+++.+ ..+++++||+||||+|+++|+..||+++|+||+.+.+
T Consensus 10 ~~~~~~~~fa~~~gd~npiH~d~~~A~~~~~~~~i~~g~~~~~ 52 (127)
T cd03441 10 VTEADIALFARLSGDPNPIHVDPEYAKAAGFGGRIAHGMLTLS 52 (127)
T ss_pred cCHHHHHHHHHHhCCCCccccCHHHHHhCCCCCceechHHHHH
Confidence 34444 4555899999999999999999999999999998654
No 28
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=98.57 E-value=9.1e-09 Score=81.33 Aligned_cols=42 Identities=24% Similarity=0.335 Sum_probs=35.1
Q ss_pred eCCcceeee-eecCCCCcCCCCHHHHHHcCCCCceEecceeee
Q 026221 195 TQPSQALVY-RLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVN 236 (241)
Q Consensus 195 ~~~~qa~~y-rlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~ 236 (241)
++.+..+.| ++|||+||||+|+++|+..||+++|+||+-+.+
T Consensus 18 vt~~~i~~fa~~~gD~np~H~D~~~A~~~~~~~~ia~G~~~~a 60 (140)
T cd03446 18 VTEADVVMFAGLSGDWNPIHTDAEYAKKTRFGERIAHGLLTLS 60 (140)
T ss_pred ECHHHHHHHHHhhCCCcccccCHHHHccCCCCCceeccccHHH
Confidence 344444444 789999999999999999999999999998754
No 29
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=98.55 E-value=1.8e-08 Score=81.42 Aligned_cols=43 Identities=16% Similarity=0.045 Sum_probs=35.2
Q ss_pred eCCcceeee-eecCCCCcCCCCHHHHHHcCCCCceEecceeeee
Q 026221 195 TQPSQALVY-RLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVNY 237 (241)
Q Consensus 195 ~~~~qa~~y-rlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~~ 237 (241)
++.++-+.| ++|||+||||+|+++||..||+++|+||+-+.+.
T Consensus 24 vt~~di~~FA~~sgD~nPiH~D~e~A~~~gfg~~Ia~G~~t~sl 67 (149)
T cd03450 24 VDQERIDQFADATGDHQWIHVDPERAAAEPFGGTIAHGFLTLSL 67 (149)
T ss_pred ECHHHHHHHHHhhCCCCccccCHHHHhhCCCCCeEECHHHHHHH
Confidence 344444444 7899999999999999999999999999876543
No 30
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=98.48 E-value=2.2e-06 Score=69.87 Aligned_cols=134 Identities=16% Similarity=0.161 Sum_probs=89.5
Q ss_pred hcCCccCCce-EEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCC
Q 026221 12 LLSQKLPEKT-FTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDP 90 (241)
Q Consensus 12 ~iG~~~~~~~-~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~ 90 (241)
.+|+.++... .+++++|++.||...|+ .+|+.-++-..-.+ ...++.+|...+...+...... . .+..+-
T Consensus 21 ~vG~~~~~~~~~~~t~~d~~~fa~~tgD--~qpiH~D~e~A~~~-~~fg~~iahG~~t~a~~~~~~~-~-----~~~~~~ 91 (159)
T COG2030 21 EVGQVFPHSPWRTVTEADIVLFAAVTGD--PNPIHLDPEAAKKT-SGFGGPIAHGMLTLALAMGLVV-A-----ALGDPS 91 (159)
T ss_pred cCCcEEecCCceEecHHHHHHHHHhcCC--CCceecCHHHHhcc-CCCCCEehhHHHHHHHHHHHHH-H-----hccCcc
Confidence 4787765554 68999999999999997 77763222111110 0123444444333333322111 0 011111
Q ss_pred CcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEe
Q 026221 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 155 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~r 155 (241)
...-.+.++++|++|+.+||+|++++++.+.+++++.-++.++.++.+ +.|+.|.+...+.+++
T Consensus 92 ~~~~~g~~~vRF~~PV~~Gdtl~~~~~v~~~~~~~~~G~v~~~~~~~~-~~g~~v~~~~~~~~~~ 155 (159)
T COG2030 92 VGANLGGDEVRFVKPVFPGDTLRARVEVLDKRPSKSRGLVTLRLETVN-QEGELVLTLEATVLVL 155 (159)
T ss_pred eeeeccccceEecCCCCCCCEEEEEEEEEEeeecCCceEEEEEEEEEc-cCCcEEEEEEEeEeEe
Confidence 345788999999999999999999999999999887666667777777 6999999998877665
No 31
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=98.43 E-value=3e-08 Score=78.95 Aligned_cols=39 Identities=18% Similarity=0.049 Sum_probs=33.6
Q ss_pred cceeeeeecCCCCcCCCCHHHHHHcCCCCceEecceeee
Q 026221 198 SQALVYRLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVN 236 (241)
Q Consensus 198 ~qa~~yrlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~ 236 (241)
+...++++|||+||||+|+++|+..||+++|+||+.+++
T Consensus 25 ~i~~fa~~~gd~~piH~D~~~a~~~~~~~~ia~G~l~~~ 63 (146)
T cd03451 25 DNVLFTLLTMNTAPLHFDAAYAAKTEFGRRLVNSLFTLS 63 (146)
T ss_pred HHHHHHHhhCCCCccccCHHHHhhCCCCCccccHHhHHH
Confidence 334455899999999999999999999999999987654
No 32
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=98.43 E-value=4.1e-06 Score=65.69 Aligned_cols=117 Identities=12% Similarity=0.060 Sum_probs=77.5
Q ss_pred ceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCCcceeeeeE
Q 026221 20 KTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQY 99 (241)
Q Consensus 20 ~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~~lvHgeq~ 99 (241)
.....+..|+..||...|+ .||++-++- |.-+ .+.++.+|+..+...+...... . . .+ +.+...+++ ++
T Consensus 6 ~~~~~t~~d~~~fa~lsGD--~nPiH~D~~-~A~~-~g~~~~iahG~l~~~~~~~~~~-~-~-~~--~~~~~~~~~--~~ 74 (126)
T cd03447 6 SLTITAPASNEPYARVSGD--FNPIHVSRV-FASY-AGLPGTITHGMYTSAAVRALVE-T-W-AA--DNDRSRVRS--FT 74 (126)
T ss_pred eEEEEChHHHHHHHHHhCC--CCccCCCHH-HHHH-cCCCCCeechhHHHHHHHHHHH-H-h-cc--CCCcceEEE--EE
Confidence 3467899999999999997 788743222 2211 1356778877666666544311 1 0 11 122333444 68
Q ss_pred EEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCC-CcEEEEEEEEE
Q 026221 100 MELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAES-GELLCMNRMTA 152 (241)
Q Consensus 100 ~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~-Ge~V~~~~st~ 152 (241)
++|.+|+.+||+|+++.++.+..+ | .++++.++.+ ++ |++|++.+.++
T Consensus 75 ~rf~~PV~~gdtl~~~~~v~~~~~---~-~~~~~~~~~n-q~~g~~V~~g~~~v 123 (126)
T cd03447 75 ASFVGMVLPNDELEVRLEHVGMVD---G-RKVIKVEARN-EETGELVLRGEAEV 123 (126)
T ss_pred EEEcccCcCCCEEEEEEEEEEEeC---C-eEEEEEEEEE-CCCCCEEEEEEEEE
Confidence 899999999999999999998632 2 3455666677 56 89999887655
No 33
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=98.33 E-value=1.5e-07 Score=77.37 Aligned_cols=37 Identities=14% Similarity=-0.155 Sum_probs=32.4
Q ss_pred cceeeeeecCCCCcCCCCHHHHHHcCCCCceEeccee
Q 026221 198 SQALVYRLSGDYNPLHSDPMVAKAAGSVLNHNYKTEL 234 (241)
Q Consensus 198 ~qa~~yrlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~ 234 (241)
+...+.+++||+||||+|+++||..||+++||||+..
T Consensus 24 ~I~~FA~~~GD~nPlH~D~eyA~~s~fg~~IApgt~~ 60 (166)
T PRK13691 24 QIRQFARAVKCDHPAFFSEDAAAELGYDALVAPLTFV 60 (166)
T ss_pred HHHHHHHHHCCCCCcccCHHHHHhCCCCCcccCHHHH
Confidence 4445558999999999999999999999999999753
No 34
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=98.32 E-value=1.9e-07 Score=88.58 Aligned_cols=42 Identities=24% Similarity=0.211 Sum_probs=35.4
Q ss_pred eeeCCcceeee-eecCCCCcCCCCHHHHHHcCCCCceEeccee
Q 026221 193 DYTQPSQALVY-RLSGDYNPLHSDPMVAKAAGSVLNHNYKTEL 234 (241)
Q Consensus 193 ~~~~~~qa~~y-rlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~ 234 (241)
..+++.+-..| ++|||+||||+|+++||..||+++|+||+-+
T Consensus 24 rtvT~~di~~FA~lsGD~nPiH~D~e~Ak~sgfg~~IahG~l~ 66 (466)
T PRK08190 24 RTLTPDDIELFAAMSGDVNPAHLDAAYAASDGFHHVVAHGMWG 66 (466)
T ss_pred EEecHHHHHHHHHHhCCCCCCCcCHHHHHhCCCCCceeCHHHH
Confidence 34555555555 8999999999999999999999999999865
No 35
>COG3777 Uncharacterized conserved protein [Function unknown]
Probab=98.24 E-value=8.8e-07 Score=76.01 Aligned_cols=131 Identities=17% Similarity=0.176 Sum_probs=93.4
Q ss_pred CCCCCcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcC--Cc--EEEEEEEEEEecCCCcEEEEEEEEEEEeccCCCCC
Q 026221 87 QHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKG--KA--AILEIETKSYNAESGELLCMNRMTAFLRGAGGFSN 162 (241)
Q Consensus 87 ~~d~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg--~G--~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~gg~g~ 162 (241)
+++..+=+=++-+++||+||..|++.++..+|..|++|. .| .++++.-++ . +.|++..+.+-++++++..-
T Consensus 72 p~~~~RRmWa~G~l~f~~pl~lgqe~t~~e~Iq~i~ek~g~~g~ltfvT~~h~~-~-~~~~l~l~Err~ivY~n~~~--- 146 (273)
T COG3777 72 PLRYRRRMWAGGELVFHLPLRLGQEYTCHETIQYIEEKHGRSGELTFVTVPHVY-S-SPGQLCLFERRTIVYTNAPA--- 146 (273)
T ss_pred CcchhhhhhccceEEEecceecCceeehhHHHHHHHHhcccccceeEEecccee-c-cCcceeeeeeeeEEEecCCC---
Confidence 566677677777899999999999999999999999983 24 556655554 4 48999999999999997641
Q ss_pred CCCCCCCCCCCCCCccCCCCCCCCCcEEEEeeeCCcceeeee---ecCCCCcCCCCHHHHHH-cCCCCceEecceee
Q 026221 163 SSQPFSYSKYQTIPVSVVKIPKSQPFAVFEDYTQPSQALVYR---LSGDYNPLHSDPMVAKA-AGSVLNHNYKTELV 235 (241)
Q Consensus 163 ~~~p~~~~~~~~~~~~~~~~p~~~Pd~~~~~~~~~~qa~~yr---lSGD~NPiH~d~~~Ak~-~Gf~~~i~h~~~~~ 235 (241)
. .| .++.+...|.......+.++--+++| ++=.-+=||.|..+|+. =|+|+.|+||+-.|
T Consensus 147 s-~p------------~~~~s~~~p~~~w~~~~tptpvllfrYsaltfN~HrIHyD~~Yat~vEgYpgLVvhGPl~a 210 (273)
T COG3777 147 S-KP------------AVKMSVAEPNGKWLKNFTPTPVLLFRYSALTFNGHRIHYDAPYATYVEGYPGLVVHGPLIA 210 (273)
T ss_pred C-Cc------------cccCCCCCCCCchhhcCCCCchheeehhhhccCceeeeccCcceeeccCCCCceecchHHH
Confidence 1 11 11222233443333445556666665 55555569999999985 79999999997543
No 36
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=98.18 E-value=4.4e-07 Score=71.87 Aligned_cols=40 Identities=15% Similarity=-0.004 Sum_probs=32.2
Q ss_pred eCCcceeeeeecCCCCcCCCCHHHHHHcCCCCceEeccee
Q 026221 195 TQPSQALVYRLSGDYNPLHSDPMVAKAAGSVLNHNYKTEL 234 (241)
Q Consensus 195 ~~~~qa~~yrlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~ 234 (241)
++.+.-+.|...||+||||+|+++||..||+++|+||+.+
T Consensus 17 vt~~~v~~Fa~~~D~npih~D~e~A~~~~~~~~ia~g~~~ 56 (140)
T cd03454 17 VTEEEIIAFAREFDPQPFHLDEEAAKESLFGGLAASGWHT 56 (140)
T ss_pred EcHHHHHHHHHccCCCccCcCHHHHhcCCCCCeeechHHH
Confidence 4455555553349999999999999999999999999654
No 37
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=98.05 E-value=1.3e-06 Score=71.25 Aligned_cols=36 Identities=8% Similarity=-0.284 Sum_probs=31.3
Q ss_pred cceeeeeecCCCCcCCCCHHHHHHcCCCCceEecce
Q 026221 198 SQALVYRLSGDYNPLHSDPMVAKAAGSVLNHNYKTE 233 (241)
Q Consensus 198 ~qa~~yrlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~ 233 (241)
+...+.+++||+||+|+|+++||..+|+++|+|++.
T Consensus 24 dI~~FA~~~GD~nPlh~D~e~A~~~~fg~~iA~~~~ 59 (159)
T PRK13692 24 KIREYAVAVQNDDAAYFEEDAAAELGYKGLLAPLTF 59 (159)
T ss_pred HHHHHHHHHCCCCCCccCHHHHHhcCCCCcccChHH
Confidence 334455899999999999999999999999999766
No 38
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=98.02 E-value=8.2e-05 Score=59.55 Aligned_cols=112 Identities=15% Similarity=0.148 Sum_probs=71.4
Q ss_pred hcCCccCCceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCC
Q 026221 12 LLSQKLPEKTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPR 91 (241)
Q Consensus 12 ~iG~~~~~~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~ 91 (241)
-+|.+++....++++.|+++||.+.|+ .||+.-++- |.-. .++++.+++-.+...+.......+ + + +..
T Consensus 10 ~vG~~~~~~~~tvt~~di~~FA~~sgD--~nPiH~D~~-~A~~-~g~~~~iahG~~~~a~~~~~~~~~-~--~----~~~ 78 (142)
T PRK13693 10 KVGDQLPEKTYPLTRQDLVNYAGVSGD--LNPIHWDDE-IAKV-VGLDTAIAHGMLTMGLGGGYVTSW-V--G----DPG 78 (142)
T ss_pred CCCCCcCccceeeCHHHHHHHHHHhCC--CCccccCHH-HHHh-cCCCCcEecHHHHHHHHHHHHHHh-c--C----CCc
Confidence 589999877789999999999999997 788743222 2111 134566666555444433221101 1 1 122
Q ss_pred cceeeeeEEEEeccCCCC-C----EEEEEEEEEEEEEcCCcEEEEEEEEEEe
Q 026221 92 LLLHGQQYMELYKPFPSS-A----SIRNEACIAGLHDKGKAAILEIETKSYN 138 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~g-d----~l~~~~~i~~v~dkg~G~~v~~~~~~~~ 138 (241)
. +. +++++|.+|+.+| | +|+++.+|+++.+ ++ .++++.+.+.+
T Consensus 79 ~-~~-~~~~rF~~pv~~g~D~~~~~l~~~~~V~~~~~-~~-~~v~~~~~~~~ 126 (142)
T PRK13693 79 A-VT-EYNVRFTAVVPVPNDGKGAELVFNGRVKSVDP-ES-KSVTIALTATT 126 (142)
T ss_pred c-eE-EEEEEecccEECCCCccceEEEEEEEEEEecc-CC-cEEEEEEEEEE
Confidence 2 32 6899999999853 4 8999999998853 33 35666666655
No 39
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=97.88 E-value=2.2e-06 Score=84.60 Aligned_cols=44 Identities=16% Similarity=0.057 Sum_probs=36.1
Q ss_pred eeCCcceeee-eecCCCCcCCCCHHHHHHcCCCCceEecceeeee
Q 026221 194 YTQPSQALVY-RLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVNY 237 (241)
Q Consensus 194 ~~~~~qa~~y-rlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~~ 237 (241)
.++.+.-+.| ++|||+||||+|+++||..||+++|+||+-+.+.
T Consensus 540 tvt~~dI~~FA~~sgD~nPiH~D~e~A~~s~fg~~Ia~G~l~~sl 584 (663)
T TIGR02278 540 TVTEADIALFAALSGDHFYAHMDEIAARESFFGKRVAHGYFVLSA 584 (663)
T ss_pred EEcHHHHHHHHHhhCCCCcccCCHHHHhhCCCCCceeCHHHHHHH
Confidence 3445554555 7899999999999999999999999999976543
No 40
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=97.83 E-value=2.9e-06 Score=83.98 Aligned_cols=42 Identities=19% Similarity=0.039 Sum_probs=34.4
Q ss_pred eCCcceeee-eecCCCCcCCCCHHHHHHcCCCCceEecceeee
Q 026221 195 TQPSQALVY-RLSGDYNPLHSDPMVAKAAGSVLNHNYKTELVN 236 (241)
Q Consensus 195 ~~~~qa~~y-rlSGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~~ 236 (241)
++...-+.| ++|||+||||+|+++||..||+++|+||+-+.+
T Consensus 553 vt~~di~~FA~lsgD~nPiH~D~e~A~~~~fg~~ia~G~l~~s 595 (675)
T PRK11563 553 VTEADIVNFACLSGDTFYAHMDEIAAAANFFGGRVAHGYFVLS 595 (675)
T ss_pred EcHHHHHHHHHhhCCCCccccCHHHHhhCCCCCceeCHHHHHH
Confidence 334444444 689999999999999999999999999997654
No 41
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=97.43 E-value=7.7e-05 Score=57.79 Aligned_cols=113 Identities=13% Similarity=0.108 Sum_probs=65.2
Q ss_pred hcCCccCC-ceEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCC
Q 026221 12 LLSQKLPE-KTFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDP 90 (241)
Q Consensus 12 ~iG~~~~~-~~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~ 90 (241)
.+|..+.. ...++++.++..||...|+ .||+.-++. |.-.. +.++.+|.-.+...+.......+ + +-+
T Consensus 5 ~~g~~~~~~~~~tit~~~~~~fa~~sgD--~nPiH~D~~-~A~~~-gf~~~ivhG~~~~a~~~~~~~~~-~-----~~~- 73 (122)
T PF01575_consen 5 RIGQGIRHSRSRTITEADIRQFAALSGD--FNPIHVDPE-YARAT-GFGGPIVHGMLTLALASGLLGDW-L-----GPN- 73 (122)
T ss_dssp CTTSEEEEEEEEEEEHHHHHHHHHHHT-----HHHH-HH-HHHTS-TTSSSB-BHHHHHHHHHHHHHHH-H-----STT-
T ss_pred CCCCccccccCEEECHHHHHHHHHhhCC--CCcceecHH-HHhhc-CCCCEEEccHHHHHHHHHHHHHh-c-----cCc-
Confidence 46777666 5699999999999999997 677632221 21110 23444444333222222211000 1 111
Q ss_pred CcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEE
Q 026221 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETK 135 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~ 135 (241)
....-++++++|.+|+.+||+|+++.++.+..+..+...++++.+
T Consensus 74 ~~~~~~~~~~rF~~PV~~gdtl~~~~~v~~~~~~~~~~~v~~~~~ 118 (122)
T PF01575_consen 74 PPARLGRFNVRFRAPVFPGDTLTAEVEVTEKREGKERVRVTVTVE 118 (122)
T ss_dssp ECEEEEEEEEEESS--BTTEEEEEEEEEEEEEEEEEEEEEEEEEE
T ss_pred cceEEEEEEEEEeccccCCCEEEEEEEEEEEEEcCceEEEEEEEE
Confidence 335677899999999999999999999999777664444444444
No 42
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=96.97 E-value=0.012 Score=42.69 Aligned_cols=58 Identities=17% Similarity=0.240 Sum_probs=46.5
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEE
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~ 154 (241)
..+-.+++++|++|++.|+++++++++..+. +..+.+..++++ ++|+++++..++++.
T Consensus 51 ~~~~~~~~i~~~~~~~~~~~i~v~~~~~~~~----~~~~~~~~~~~~-~~g~~~a~~~~~~~~ 108 (110)
T cd00586 51 GLVVVELEIDYLRPLRLGDRLTVETRVLRLG----RKSFTFEQEIFR-EDGELLATAETVLVC 108 (110)
T ss_pred eEEEEEeEeeEcCccCCCCEEEEEEEEEecC----cEEEEEEEEEEC-CCCeEEEEEEEEEEE
Confidence 4566889999999999999999999998862 234556777766 379999999987764
No 43
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=96.73 E-value=0.018 Score=45.83 Aligned_cols=59 Identities=12% Similarity=0.187 Sum_probs=46.8
Q ss_pred CcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEe
Q 026221 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 155 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~r 155 (241)
...+-+-++++|++|+.+||+|++++++.... + .++.++.++.. +|+.|++.+.+++++
T Consensus 87 ~~~l~gi~~~kF~~pv~pGd~l~i~~~i~~~~---~-~~v~~~~~~~~--~g~~v~~~~~~~~~~ 145 (147)
T PRK00006 87 LVYFAGIDKARFKRPVVPGDQLILEVELLKQR---R-GIWKFKGVATV--DGKLVAEAELMFAIR 145 (147)
T ss_pred EEEEeeeeEEEEccccCCCCEEEEEEEEEEee---C-CEEEEEEEEEE--CCEEEEEEEEEEEEE
Confidence 33566678999999999999999999997653 2 36666777653 799999999988865
No 44
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=96.71 E-value=0.022 Score=43.25 Aligned_cols=56 Identities=20% Similarity=0.271 Sum_probs=45.5
Q ss_pred ceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 026221 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~ 153 (241)
.+-.+.++.|+||.+.|++|.+++++. .+|+ .+...+.++++ ++|+++++.+.|+-
T Consensus 57 ~~t~~~~i~f~rp~~~G~~l~~~a~v~---~~g~-~~~~~~~~i~~-~~~~~va~~~~t~~ 112 (114)
T TIGR02286 57 AVAAQCTIDFLRPGRAGERLEAEAVEV---SRGG-RTGTYDVEVVN-QEGELVALFRGTSR 112 (114)
T ss_pred eEEEEEEEEEecCCCCCCEEEEEEEEE---EeCC-cEEEEEEEEEc-CCCCEEEEEEEEEE
Confidence 456788999999999999999999886 3444 44567888887 68999999988774
No 45
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=96.69 E-value=0.023 Score=38.64 Aligned_cols=59 Identities=15% Similarity=0.171 Sum_probs=46.9
Q ss_pred CCCcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEE
Q 026221 89 DPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTA 152 (241)
Q Consensus 89 d~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~ 152 (241)
.-...+.++.++.|++|+..|+.+..+.++.+...+ .+.++..+.+ ++|+++++...++
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~ 99 (100)
T cd03440 41 RGLGAVTLSLDVRFLRPVRPGDTLTVEAEVVRVGRS----SVTVEVEVRN-EDGKLVATATATF 99 (100)
T ss_pred CCCeEEEEEEEeEEecCCCCCCEEEEEEEEEecccc----EEEEEEEEEC-CCCCEEEEEEEEe
Confidence 345678899999999999999999999999876432 5666777776 4699998876654
No 46
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=96.32 E-value=0.033 Score=42.42 Aligned_cols=56 Identities=18% Similarity=0.182 Sum_probs=44.8
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~ 153 (241)
.++=.+-++.|.||.+.| .|++++++.. +|+ .+...+.++++ ++|++|++.+.|+.
T Consensus 61 ~~vt~~l~i~f~~p~~~g-~l~a~a~v~~---~gr-~~~~~~~~i~~-~~g~~va~~~~t~~ 116 (117)
T TIGR00369 61 AVVGLELNANHLRPAREG-KVRAIAQVVH---LGR-QTGVAEIEIVD-EQGRLCALSRGTTA 116 (117)
T ss_pred eEEEEEEEeeeccccCCC-EEEEEEEEEe---cCc-eEEEEEEEEEC-CCCCEEEEEEEEEc
Confidence 356668899999999998 9999998752 333 66777888887 58999999998874
No 47
>PRK11688 hypothetical protein; Provisional
Probab=96.07 E-value=0.07 Score=42.97 Aligned_cols=58 Identities=12% Similarity=0.114 Sum_probs=46.2
Q ss_pred CcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEE
Q 026221 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~ 154 (241)
..++=.+-++.|.||.. |+.|.+++++.. +|+ .++.++.++++ ++|++|++.+.|+++
T Consensus 96 ~~~vTi~l~i~fl~p~~-g~~l~a~a~v~~---~g~-r~~~~~~~i~~-~~g~lvA~a~~t~~v 153 (154)
T PRK11688 96 SRLGTIDLRVDYLRPGR-GERFTATSSVLR---AGN-KVAVARMELHN-EQGVHIASGTATYLV 153 (154)
T ss_pred ccceEEEEEEEeeccCC-CCeEEEEEEEEE---ccC-CEEEEEEEEEC-CCCCEEEEEEEEEEe
Confidence 34566788999999995 899999999863 333 45667888887 589999999998874
No 48
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=96.04 E-value=0.053 Score=45.26 Aligned_cols=56 Identities=20% Similarity=0.316 Sum_probs=43.5
Q ss_pred ceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEE
Q 026221 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~ 154 (241)
.+=+.++++|.+|+.+||+|++++++.... ++ ++.++.+++. +|..|++...+++.
T Consensus 126 ~~~~i~~irF~kPV~pGD~L~~ea~v~~~~--~~--~~~v~~~~~v--~g~~V~ege~~~~~ 181 (185)
T PRK04424 126 ALTGVANIRFKRPVKLGERVVAKAEVVRKK--GN--KYIVEVKSYV--GDELVFRGKFIMYR 181 (185)
T ss_pred EEEEeeeEEEccCCCCCCEEEEEEEEEEcc--CC--EEEEEEEEEE--CCEEEEEEEEEEEE
Confidence 566789999999999999999999998432 22 3355555553 79999999988865
No 49
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=95.94 E-value=0.099 Score=40.42 Aligned_cols=60 Identities=15% Similarity=0.202 Sum_probs=47.1
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEec
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 156 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg 156 (241)
+.+=.+.+++|++|+..||+|+++++++.+. +.-++...++++ .+|+++++..++.++-.
T Consensus 53 ~~~v~~~~i~y~~~~~~~d~i~v~t~v~~~~----~~s~~~~~~i~~-~~g~~~a~~~~~~v~~d 112 (130)
T PRK10800 53 AFVVRKMTVEYYAPARLDDMLEVQSEITSMR----GTSLTFTQRIVN-AEGTLLNEAEVLIVCVD 112 (130)
T ss_pred EEEEEEEEEEEcCcccCCCEEEEEEEEEeeC----cEEEEEEEEEEc-CCCeEEEEEEEEEEEEE
Confidence 4455588999999999999999999998875 233444555666 48999999999888764
No 50
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=95.87 E-value=0.11 Score=38.62 Aligned_cols=55 Identities=16% Similarity=0.219 Sum_probs=43.8
Q ss_pred ceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 026221 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~ 153 (241)
.+=.+.+++|++|++. +.+.+++++... ++..+.++.++++ ++|+++++.+.++.
T Consensus 58 ~~~~~~~i~f~~p~~~-~~v~~~~~v~~~----g~~~~~~~~~~~~-~~~~~~a~a~~~~~ 112 (113)
T cd03443 58 AVTVDLNVNYLRPARG-GDLTARARVVKL----GRRLAVVEVEVTD-EDGKLVATARGTFA 112 (113)
T ss_pred eEEEEEEEeEEcCCCC-CeEEEEEEEEec----CceEEEEEEEEEC-CCCCEEEEEEEEEe
Confidence 4455779999999999 999999998654 4467778888886 46999999887664
No 51
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=95.69 E-value=0.087 Score=36.39 Aligned_cols=51 Identities=20% Similarity=0.378 Sum_probs=38.6
Q ss_pred CcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEE
Q 026221 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLC 146 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~ 146 (241)
...+=.+.++.|++|++.||+|++++++..+- +..++++.++++ ++++++|
T Consensus 29 ~~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g----~~~~~~~~~v~~-~~~~~~~ 79 (79)
T PF03061_consen 29 RGVVTVELSIDFLRPVRPGDTLRVEARVVRVG----RKSFTVEVEVYS-EDGRLCA 79 (79)
T ss_dssp EEEEEEEEEEEESS-BBTTSEEEEEEEEEEEE----SSEEEEEEEEEE-TTSCEEE
T ss_pred cceEEEEEEEEEccccCCCeEEEEEEEEEEEC----CEEEEEEEEEEE-CCCcEEC
Confidence 44566789999999999999999999997754 245666777777 5777765
No 52
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=95.66 E-value=0.11 Score=39.91 Aligned_cols=55 Identities=18% Similarity=0.239 Sum_probs=42.3
Q ss_pred ceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 026221 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~ 153 (241)
.+=+-++++|++|+.+|++|++++++.... + ..+.++.+++. +|+.+++.+-++.
T Consensus 75 ~l~~~~~~kf~~pv~pgd~l~i~~~v~~~~--~--~~~~~~~~~~~--~g~~v~~~~~~~~ 129 (131)
T cd01288 75 YFAGIDKARFRKPVVPGDQLILEVELLKLR--R--GIGKFKGKAYV--DGKLVAEAELMFA 129 (131)
T ss_pred EEeeecccEEccccCCCCEEEEEEEEEEee--C--CEEEEEEEEEE--CCEEEEEEEEEEE
Confidence 455669999999999999999999988643 2 35555666653 7899999887665
No 53
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=95.63 E-value=0.13 Score=38.72 Aligned_cols=59 Identities=10% Similarity=0.074 Sum_probs=43.5
Q ss_pred ceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecC----CCcEEEEEEEEEEEec
Q 026221 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAE----SGELLCMNRMTAFLRG 156 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~----~Ge~V~~~~st~~~rg 156 (241)
.++.+ +++|++|+..||+|.+++++..+. +..+.++.++++++ +++++++...++++..
T Consensus 52 ~~~~~-~~~f~~p~~~gd~l~i~~~v~~~g----~~~~~~~~~i~~~~~~~~~~~~~a~~~~~~v~~~ 114 (123)
T cd03442 52 TASVD-RIDFLKPVRVGDVVELSARVVYTG----RTSMEVGVEVEAEDPLTGERRLVTSAYFTFVALD 114 (123)
T ss_pred EEEEC-ceEEcCccccCcEEEEEEEEEEec----CCeEEEEEEEEEecCCCCcEEEEEEEEEEEEEEC
Confidence 44444 899999999999999999998762 23445566666532 3468999999998874
No 54
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=95.57 E-value=0.06 Score=41.83 Aligned_cols=108 Identities=15% Similarity=0.126 Sum_probs=61.1
Q ss_pred eEEecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCceehhhhccccCCCCCCCCCCCCCCCCcceeeeeEE
Q 026221 21 TFTYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLPTFSALFSFELEPSGAIDLPGLQHDPRLLLHGQQYM 100 (241)
Q Consensus 21 ~~~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apPTf~~vl~~~~~~~~~~~~~~~~~d~~~lvHgeq~~ 100 (241)
...++..++..|++ .|+ .||++-++- |.- ..+.++.+++-.+...+.......+ + .++. ...=+.+++
T Consensus 10 ~~~~~~~~~~~~~~-SgD--~nPiH~d~e-~A~-~~g~~~~iahG~~t~a~~~~~~~~~-~-~~~~-----~~~~~~~~~ 77 (122)
T cd03448 10 EIPTSPDQALLYRL-SGD--YNPLHIDPA-FAK-AAGFPRPILHGLCTYGFAARAVLEA-F-ADGD-----PARFKAIKV 77 (122)
T ss_pred EecCCcChHHHHHH-hCC--CCccccCHH-HHH-HcCCCCceehhHHHHHHHHHHHHHH-h-cCCC-----cceeEEEEE
Confidence 46788999999998 786 778642221 111 0123555555443333322211001 1 1111 122345799
Q ss_pred EEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEE
Q 026221 101 ELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNR 149 (241)
Q Consensus 101 ~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~ 149 (241)
+|.+|+.+||+|+++.++. ++ .++++.... ++|+.|++..
T Consensus 78 rF~~PV~~gDtl~~~~~~~-----~~--~v~~~~~~~--~~g~~v~~g~ 117 (122)
T cd03448 78 RFSSPVFPGETLRTEMWKE-----GN--RVIFQTKVV--ERDVVVLSNG 117 (122)
T ss_pred EEcCCccCCCEEEEEEEEe-----CC--EEEEEEEEc--cCCcEEEECC
Confidence 9999999999999988732 22 556666653 3677776543
No 55
>PRK10254 thioesterase; Provisional
Probab=95.51 E-value=0.18 Score=40.12 Aligned_cols=60 Identities=15% Similarity=0.231 Sum_probs=47.6
Q ss_pred CcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEec
Q 026221 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 156 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg 156 (241)
...+=.|-++.|.||...| .|++++++.. +|| .+.+.+.++++ ++|.+++..+.|..+.|
T Consensus 78 ~~~vTiel~in~Lrp~~~g-~l~a~a~vi~---~Gr-~~~v~~~~v~d-~~g~l~a~~~~t~~i~~ 137 (137)
T PRK10254 78 QCVVGTELNATHHRPVSEG-KVRGVCQPLH---LGR-QNQSWEIVVFD-EQGRRCCTCRLGTAVLG 137 (137)
T ss_pred CeEEEEEEEeEEeccCcCC-eEEEEEEEEe---cCc-CEEEEEEEEEc-CCCCEEEEEEEEEEEeC
Confidence 3467778899999999765 7999988632 344 56667888887 68999999999988765
No 56
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=95.38 E-value=0.092 Score=41.29 Aligned_cols=55 Identities=18% Similarity=0.300 Sum_probs=40.1
Q ss_pred CcceeeeeEEEEeccCCCCC-EEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEE
Q 026221 91 RLLLHGQQYMELYKPFPSSA-SIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMN 148 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~gd-~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~ 148 (241)
...+-+-.+++|++|+.+|+ +|+.++++..+++... .+...+.+++. +|+.|++.
T Consensus 82 ~~~l~~~~~~kF~~~v~Pg~~~l~~~v~i~~~~~~~~-~~~~~~~~~~v--dg~~v~~~ 137 (138)
T PF07977_consen 82 VPFLAGIRNVKFRGPVYPGDKTLRIEVEIKKIRRREG-GMAIFDGTAYV--DGELVAEA 137 (138)
T ss_dssp EEEEEEEEEEEE-S-B-TTE-EEEEEEEEEEEEEEET-TEEEEEEEEEE--TTEEEEEE
T ss_pred EEEeccccEEEECccEeCCCcEEEEEEEEEEeecccC-CEEEEEEEEEE--CCEEEEEE
Confidence 34678899999999999999 9999999999854433 34445666554 79999886
No 57
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=95.20 E-value=0.15 Score=40.09 Aligned_cols=57 Identities=11% Similarity=0.123 Sum_probs=43.2
Q ss_pred CcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 026221 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~ 153 (241)
...+-+-++++|++|+.+||+|++++++... .+ .++.+++++. .+|+.+++.+.++.
T Consensus 83 ~~~l~~~~~~kF~~~v~pGd~l~i~~~i~~~---~~-~~~~~~~~~~--~~g~~va~~~~~~~ 139 (140)
T TIGR01750 83 LVYFAGIDKAKFRRPVVPGDQLILHAEFLKK---RR-KIGKFKGEAT--VDGKVVAEAEITFA 139 (140)
T ss_pred EEEEeecceeEECCccCCCCEEEEEEEEEEc---cC-CEEEEEEEEE--ECCEEEEEEEEEEE
Confidence 3467777999999999999999999998732 22 3455566664 37999999987764
No 58
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=94.96 E-value=0.49 Score=35.94 Aligned_cols=59 Identities=15% Similarity=0.175 Sum_probs=46.1
Q ss_pred ceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEecc
Q 026221 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~ 157 (241)
.+=.+.+++|++|+..||+|++++++..+. +.-+..+.++++ +|+.+++..++.+....
T Consensus 53 ~vv~~~~i~y~~~~~~gd~v~v~~~v~~~~----~~~~~~~~~i~~--~g~~~a~~~~~~v~vd~ 111 (126)
T TIGR02799 53 FVVRSMELDYLKPARLDDLLTVTTRVVELK----GASLVFAQEVRR--GDTLLCEATVEVACVDA 111 (126)
T ss_pred EEEEEEEEEEcCcccCCCEEEEEEEEEecC----ceEEEEEEEEEe--CCEEEEEEEEEEEEEEC
Confidence 466688999999999999999999997754 234445666664 68999999998887744
No 59
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=94.88 E-value=0.25 Score=39.85 Aligned_cols=60 Identities=10% Similarity=0.058 Sum_probs=48.4
Q ss_pred cceeeeeEEEEeccCCCCC-EEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 026221 92 LLLHGQQYMELYKPFPSSA-SIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd-~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~ 153 (241)
.++=+-++++|++|+.+|| +|+.+++|+.+...+.+.++..++.++- +|++|++....-+
T Consensus 85 ~~l~~~~~~kfr~~v~Pgd~~l~~e~~i~~~~~~~~~~~~~~~~~~~v--dg~~v~~a~~~~~ 145 (150)
T cd01287 85 GAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPRPYIIADASLWV--DGLRIYEAKDIAV 145 (150)
T ss_pred eEeccceEEEECccCcCCCEEEEEEEEEEEEEccCCccEEEEEEEEEE--CCEEEEEEEccEE
Confidence 3455667899999999999 8999999999987666677777888775 7999999875433
No 60
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=94.81 E-value=0.25 Score=37.69 Aligned_cols=52 Identities=13% Similarity=0.260 Sum_probs=41.5
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEE
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNR 149 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~ 149 (241)
..+=+-++++|++|+.+||+|++++++..... .++.++.+++. +|+.+++.+
T Consensus 75 ~~l~~~~~~kf~~~v~pgd~l~i~~~i~~~~~----~~~~~~~~~~~--~g~~v~~~~ 126 (131)
T cd00493 75 GYLAGVRKVKFRGPVLPGDTLTLEVELLKVRR----GLGKFDGRAYV--DGKLVAEAE 126 (131)
T ss_pred EEEEEcceeEECCCcCCCCEEEEEEEEEEeeC----CEEEEEEEEEE--CCEEEEEEE
Confidence 45666789999999999999999999987553 35556666665 599999887
No 61
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.74 E-value=0.33 Score=38.29 Aligned_cols=58 Identities=19% Similarity=0.276 Sum_probs=44.7
Q ss_pred eeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEec
Q 026221 94 LHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 156 (241)
Q Consensus 94 vHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg 156 (241)
+=.+-.+.|.||...|+ +++++++... |+ .+.+.+.++++++.|++|++.+.|+++..
T Consensus 81 ~ti~l~i~flr~~~~g~-v~a~a~v~~~---G~-~~~v~~i~v~~~~~~~lva~~~~t~~v~~ 138 (141)
T COG2050 81 VTLELNINFLRPVKEGD-VTAEARVLHL---GR-RVAVVEIEVKNDEGGRLVAKGTGTYAVLR 138 (141)
T ss_pred EEEEEEehhccCCCCCe-EEEEEEEEee---CC-EEEEEEEEEEECCCCeEEEEEEEEEEEec
Confidence 33477889999999999 9999999765 43 44446777775456699999999988753
No 62
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=94.67 E-value=0.54 Score=35.48 Aligned_cols=63 Identities=8% Similarity=0.165 Sum_probs=43.3
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcE--EEEEEEEEEEeccC
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGEL--LCMNRMTAFLRGAG 158 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~--V~~~~st~~~rg~g 158 (241)
.++=.+.+++|++|+..+|++++++++.++.. .-+.++.++++..+|+. +++..++.+.-...
T Consensus 43 ~~~v~~~~i~y~~~~~~~d~~~v~~~~~~~~~----~s~~~~~~i~~~~~g~~~~~a~~~~~~v~~d~~ 107 (121)
T PF13279_consen 43 GFVVAESEIDYLRPLRFGDRLEVETRVEEIGG----KSFRFEQEIFRPADGKGELAATGRTVMVFVDYK 107 (121)
T ss_dssp EEEEEEEEEEE-S--BTTSEEEEEEEEEEEES----SEEEEEEEEEECSTTEEEEEEEEEEEEEEEETT
T ss_pred eEEEEEEEEEEcccccCCCEEEEEEEEEEECC----cEEEEEEEEEEcCCCceEEEEEEEEEEEEEeCC
Confidence 45667899999999999999999999976442 23444555554235654 99999988887554
No 63
>PLN02864 enoyl-CoA hydratase
Probab=94.26 E-value=0.38 Score=43.44 Aligned_cols=118 Identities=13% Similarity=0.125 Sum_probs=64.6
Q ss_pred cCCccCCceE-EecHHHHHHHHHhcCCCCCCCCCcccccceecccCccCcccCc--eehhhhccccCCCCCCCCCCCCCC
Q 026221 13 LSQKLPEKTF-TYTERDAAIYALGVGACGRDAVDADELKYVYHENGQQFIQVLP--TFSALFSFELEPSGAIDLPGLQHD 89 (241)
Q Consensus 13 iG~~~~~~~~-~~~~~~i~~yA~avG~~~~dp~~~~~l~~~~e~~~~~~~~apP--Tf~~vl~~~~~~~~~~~~~~~~~d 89 (241)
++...+.... ..++.+..+||...|+ -||+.-++. |.-. .+.+.-++.= |++.+...-. .+ + .+.+
T Consensus 183 ~p~~~pd~~~~~~t~~~~~~~a~lSGD--~NPiH~d~~-~A~~-~gf~~~IaHGm~t~g~~~~~~~--~~-~----~~~~ 251 (310)
T PLN02864 183 IPKSQPDAVFEDQTQPSQALLYRLSGD--YNPLHSDPM-FAKV-AGFTRPILHGLCTLGFAVRAVI--KC-F----CNGD 251 (310)
T ss_pred CCCCCCCeEEeeccChhHHHHHHhhCC--CCcccCCHH-HHhh-CCCCCceeccHHHHHHHHHHHH--hh-h----cCCC
Confidence 3444443333 6788889999999997 788743332 1111 1223333321 3333222111 00 0 1112
Q ss_pred CCcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEE
Q 026221 90 PRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTA 152 (241)
Q Consensus 90 ~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~ 152 (241)
... -.+++++|.+|+.+||+|+++.+. .+ ..+.+++.. + ++|++|++...++
T Consensus 252 ~~~--~~~~~~rF~~PV~pGdtl~~~~~~-----~~--~~v~~~~~~-~-~~g~~vl~G~a~~ 303 (310)
T PLN02864 252 PTA--VKTISGRFLLHVYPGETLVTEMWL-----EG--LRVIYQTKV-K-ERNKAVLSGYVDL 303 (310)
T ss_pred Cce--EEEEEEEEcCCccCCCEEEEEEEe-----CC--CEEEEEEEE-e-cCCeEEEEEEEEE
Confidence 222 246899999999999999766542 22 234455554 4 5788888876655
No 64
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=94.15 E-value=0.69 Score=34.35 Aligned_cols=54 Identities=17% Similarity=0.153 Sum_probs=39.2
Q ss_pred eeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEE
Q 026221 94 LHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTA 152 (241)
Q Consensus 94 vHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~ 152 (241)
+=.+.+++|++|+..||++++++++..+. +.-+..+.++++ .+|+.++...++.
T Consensus 50 ~v~~~~i~y~~~~~~gd~v~v~~~~~~~~----~~s~~~~~~i~~-~~~~~~~~~~~~~ 103 (117)
T TIGR00051 50 VVVNINIEYKKPARLDDVLEIRTQIEELN----GFSFVFSQEIFN-EDEALLKAATVIV 103 (117)
T ss_pred EEEEEEEEECCcccCCCEEEEEEEEEecC----cEEEEEEEEEEe-CCCcEEEeeEEEE
Confidence 44578899999999999999999998863 234455666666 4666666665544
No 65
>PRK10293 acyl-CoA esterase; Provisional
Probab=94.15 E-value=0.61 Score=36.91 Aligned_cols=57 Identities=14% Similarity=0.177 Sum_probs=45.1
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEE
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~ 154 (241)
..+=.|-++.|.||...| +|++++++.. +|+ .+...+.+++| ++|++++..+.|+.+
T Consensus 79 ~~vTiel~infl~p~~~g-~l~a~a~vv~---~Gr-~~~~~~~~v~d-~~g~l~A~~~~t~~i 135 (136)
T PRK10293 79 KVVGLEINANHVRSAREG-RVRGVCKPLH---LGS-RHQVWQIEIFD-EKGRLCCSSRLTTAI 135 (136)
T ss_pred eEEEEEEEeEEecccCCc-eEEEEEEEEe---cCC-CEEEEEEEEEe-CCCCEEEEEEEEEEE
Confidence 457778899999999875 7998887743 333 56667888888 589999999998865
No 66
>PLN02322 acyl-CoA thioesterase
Probab=93.78 E-value=0.86 Score=37.01 Aligned_cols=60 Identities=20% Similarity=0.130 Sum_probs=45.6
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEec-----CCCcEEEEEEEEEEEe
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNA-----ESGELLCMNRMTAFLR 155 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~-----~~Ge~V~~~~st~~~r 155 (241)
..+=.+-.+.|+||...|+.|++++++.. +|+ .+...+.+++++ +.|.++++.+.|+.+.
T Consensus 70 ~~vTiel~infLrpa~~G~~L~Aea~vv~---~Gr-~~~~~ev~V~~~~~~~~~~~~lva~a~~T~~~~ 134 (154)
T PLN02322 70 RVAGIQLSINHLKSADLGDLVFAEATPVS---TGK-TIQVWEVKLWKTTDKDKANKILISSSRVTLICN 134 (154)
T ss_pred ceEEEEEEEEEeccCCCCCEEEEEEEEEe---cCC-CEEEEEEEEEECCCCcccCCeEEEEEEEEEEEc
Confidence 46778889999999999999999998743 333 555667777762 1378999999988654
No 67
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=93.76 E-value=1.3 Score=34.92 Aligned_cols=60 Identities=13% Similarity=0.128 Sum_probs=48.5
Q ss_pred ceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEeccC
Q 026221 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAG 158 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~g 158 (241)
++=.+.+++|++|+.-||.|+++++++.+. +.-++...+++++ ++++++...+.++-...
T Consensus 57 ~~v~~~~i~y~~p~~~~d~l~v~~~v~~~~----~~s~~~~~~i~~~--~~l~a~~~~~~V~v~~~ 116 (137)
T COG0824 57 FVVVEAEIDYLRPARLGDVLTVRTRVEELG----GKSLTLGYEIVNE--DELLATGETTLVCVDLK 116 (137)
T ss_pred EEEEEEEeEECCCccCCCEEEEEEEEEeec----CeEEEEEEEEEeC--CEEEEEEEEEEEEEECC
Confidence 566789999999999999999999998764 3456667777773 39999999999887643
No 68
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=93.67 E-value=0.46 Score=34.32 Aligned_cols=57 Identities=11% Similarity=0.101 Sum_probs=43.3
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~ 153 (241)
...-.+..+.||+|...++.+..++++.. .|+ .+...+.++++ ++|++|++.+.+++
T Consensus 42 ~~~t~~~~i~F~~~~~~~~~~~~~~~~~~---~g~-~~~~~~~~i~~-~~G~lva~~~~~~~ 98 (99)
T cd00556 42 GFASLDHHIYFHRPGDADEWLLYEVESLR---DGR-SRALRRGRAYQ-RDGKLVASATQSFL 98 (99)
T ss_pred CeeeeEEEEEEcCCCCCCccEEEEEEecc---cCC-CceEEEEEEEC-CCCcEEEEEEEeEc
Confidence 45667889999999999999988887743 334 34455777776 57999999988764
No 69
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=93.54 E-value=0.54 Score=44.79 Aligned_cols=59 Identities=12% Similarity=0.206 Sum_probs=46.3
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEe
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 155 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~r 155 (241)
..+=+-++++|++|+.+||+|++++++..... +.+++++.+++. +|+.|++.+.++.+.
T Consensus 402 g~LlgI~kvKF~~PV~PGDtL~I~veI~~~~~---~giv~f~g~~~v--dGelVaeael~~~v~ 460 (464)
T PRK13188 402 TYFMKIDKVKFRQKVVPGDTLIFKVELLSPIR---RGICQMQGKAYV--NGKLVCEAELMAQIV 460 (464)
T ss_pred EEEEeccEEEEcCCCCCCCEEEEEEEEEEEec---CCEEEEEEEEEE--CCEEEEEEEEEEEEe
Confidence 34555579999999999999999999887432 345566777663 799999999988765
No 70
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=93.06 E-value=0.0039 Score=48.52 Aligned_cols=44 Identities=32% Similarity=0.160 Sum_probs=31.4
Q ss_pred EeeeCCcceeeeee-cCCCCcCCCCHHHHHHcCCCCceEecceee
Q 026221 192 EDYTQPSQALVYRL-SGDYNPLHSDPMVAKAAGSVLNHNYKTELV 235 (241)
Q Consensus 192 ~~~~~~~qa~~yrl-SGD~NPiH~d~~~Ak~~Gf~~~i~h~~~~~ 235 (241)
...+..++.+.|.+ .||.||+|+|++.|+..|+++.+|..+..+
T Consensus 11 ~~~v~~~~i~~ya~avg~~~p~~~d~~~a~~~~~~~~~apPt~~~ 55 (132)
T PF13452_consen 11 TYTVTRRDIRRYALAVGDPNPLYLDEEYARAAGHGGLIAPPTFAV 55 (132)
T ss_dssp EEEE-HHHHHHHHHHTT-CTTHHHHCTSS--TTSTT-B--GGGHH
T ss_pred eEEECHHHHHHHHHHhCcCCccccCHhHhhccCCCCcccCHHHHh
Confidence 46677888888855 699999999999999999999999888754
No 71
>PF12119 DUF3581: Protein of unknown function (DUF3581); InterPro: IPR021974 This family consists of uncharacterised bacterial proteins.
Probab=92.81 E-value=0.031 Score=47.22 Aligned_cols=23 Identities=30% Similarity=0.609 Sum_probs=18.6
Q ss_pred EeeeCCcceeee--eecCCCCcCCC
Q 026221 192 EDYTQPSQALVY--RLSGDYNPLHS 214 (241)
Q Consensus 192 ~~~~~~~qa~~y--rlSGD~NPiH~ 214 (241)
...++++||-.+ ++.||+||||-
T Consensus 13 ~v~is~~QAS~FAK~VAgDFNPIHD 37 (218)
T PF12119_consen 13 SVSISAEQASRFAKEVAGDFNPIHD 37 (218)
T ss_pred EEEEcHHHHhHHHHHhccCCCccCC
Confidence 356788998777 48999999994
No 72
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=91.22 E-value=1.5 Score=42.04 Aligned_cols=59 Identities=10% Similarity=0.095 Sum_probs=47.2
Q ss_pred ceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEec
Q 026221 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 156 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg 156 (241)
.+=.+.+++|++|+..||+|++++++.++. +.-+.++.++++ .+|+++++..+++++-.
T Consensus 396 ~vvv~~~i~y~rp~~~gD~v~I~t~v~~~~----~~s~~~~~~i~~-~~g~l~A~g~~~~v~vD 454 (495)
T PRK07531 396 YYTVETHIRHLGEAKAGQALHVETQLLSGD----EKRLHLFHTLYD-AGGELIATAEHMLLHVD 454 (495)
T ss_pred EEEEEEEEEEcccCCCCCEEEEEEEEEecC----CcEEEEEEEEEC-CCCcEEEEEEEEEEEEE
Confidence 344789999999999999999999997764 244555666776 58999999999888764
No 73
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=90.72 E-value=0.96 Score=35.41 Aligned_cols=57 Identities=14% Similarity=0.302 Sum_probs=38.5
Q ss_pred ceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 026221 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~ 153 (241)
++=-+-+++|++| +-+.|++++++++ .+.++....+++.+++| .+|+.|++.+-+..
T Consensus 75 ~~~k~~~i~f~kp--a~g~v~a~~~~~~-e~~~~~~~~~~~v~i~D-~~G~~Va~~~~t~~ 131 (132)
T PF14539_consen 75 VWDKSAEIDFLKP--ARGDVTATAELTE-EQIGERGELTVPVEITD-ADGEVVAEATITWY 131 (132)
T ss_dssp EEEEEEEEEE-S-----S-EEEEEE-TC-CHCCHEEEEEEEEEEEE-TTC-EEEEEEEEEE
T ss_pred EEEEeeEEEEEec--cCCcEEEEEEcCH-HHhCCCcEEEEEEEEEE-CCCCEEEEEEEEEE
Confidence 4567889999999 5678899999988 22333455777888888 69999999988765
No 74
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=89.54 E-value=1.3 Score=35.77 Aligned_cols=94 Identities=10% Similarity=0.038 Sum_probs=57.1
Q ss_pred eecccCccCcccCceehhhhccccCCCCC--CCCCCCCCC-CCcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcE
Q 026221 52 VYHENGQQFIQVLPTFSALFSFELEPSGA--IDLPGLQHD-PRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAA 128 (241)
Q Consensus 52 ~~e~~~~~~~~apPTf~~vl~~~~~~~~~--~~~~~~~~d-~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~ 128 (241)
.+.+| |+--|.|+-|+...++.|.. +..-..+.. -.....+=+..+|.+|+.+||+|..++++...+. +.
T Consensus 47 fF~gH----FP~~PimPGVLileamaQ~~g~~~~~~~~~~~~~~~~~gid~~kF~~~V~PGd~l~l~~~~~~~~~---~~ 119 (147)
T COG0764 47 FFTGH----FPGDPIMPGVLILEAMAQAAGFLLGWLLGNKGKLGYFLGIDNAKFKRPVLPGDQLELEVKLLKSRR---LG 119 (147)
T ss_pred eeCCc----CCCCCCcchhHHHHHHHHHHHHHHhccccCCccEEEEEEecceeecCccCCCCEEEEEEEEEEecc---cc
Confidence 44456 66668888887655311100 000000111 3557888999999999999999988888866442 22
Q ss_pred EEEEEEEEEecCCCcEEEEEEEEEEE
Q 026221 129 ILEIETKSYNAESGELLCMNRMTAFL 154 (241)
Q Consensus 129 ~v~~~~~~~~~~~Ge~V~~~~st~~~ 154 (241)
+....++.. .+|++|++.......
T Consensus 120 ~~~~~~~a~--Vdg~~v~~a~~~~~~ 143 (147)
T COG0764 120 IGKAKGVAT--VDGKVVAEAELLFAG 143 (147)
T ss_pred eEEEEEEEE--ECCEEEEEEEEEEEE
Confidence 333334433 279998888776554
No 75
>PRK05174 3-hydroxydecanoyl-(acyl carrier protein) dehydratase; Validated
Probab=89.15 E-value=3 Score=34.39 Aligned_cols=55 Identities=13% Similarity=0.070 Sum_probs=42.5
Q ss_pred ceeeeeEEEEeccCCCCCE-EEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEE
Q 026221 93 LLHGQQYMELYKPFPSSAS-IRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRM 150 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~-l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~s 150 (241)
.+=+.++++|++++.++++ ++.+++|..+.. .++-++..+++++. +|+++++.+.
T Consensus 105 ~l~g~~~~kfr~~v~Pgd~~l~l~v~i~~~~~-~~~~~~~~~~~i~v--~g~~va~a~~ 160 (172)
T PRK05174 105 RALGVGEVKFTGQVLPTAKKVTYEIDIKRVIN-RKLVMGIADGRVLV--DGEEIYTAKD 160 (172)
T ss_pred EEeeccEEEECccCcCCCEEEEEEEEEEEEec-CCCCEEEEEEEEEE--CCEEEEEEEe
Confidence 4556788999999999998 899999988754 44455566777764 6899988854
No 76
>PLN02370 acyl-ACP thioesterase
Probab=88.81 E-value=3.8 Score=38.65 Aligned_cols=62 Identities=5% Similarity=-0.014 Sum_probs=48.8
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEecc
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~ 157 (241)
.-|=...+++|+||..-||+|++++++.++ ++..+..+.++++..+|+.+++..|+.++--.
T Consensus 196 ~WVLtr~~I~~~R~P~~gD~V~V~Twv~~~----~k~~~~Rdf~I~D~~~Ge~la~A~SvWV~mD~ 257 (419)
T PLN02370 196 IWVVTRMQVLVDRYPTWGDVVQVDTWVSAS----GKNGMRRDWLVRDCKTGETLTRASSVWVMMNK 257 (419)
T ss_pred eEEEEEEEEEeCcCCCCCCEEEEEEEEeeC----CCCEEEEEEEEEECCCCeEEEEEEEEEEEEEC
Confidence 357778999999999999999999999775 22344456777764479999999999887653
No 77
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=88.15 E-value=2.1 Score=33.76 Aligned_cols=59 Identities=14% Similarity=0.139 Sum_probs=42.0
Q ss_pred CcceeeeeEEEEeccCCCCCEEEEEEEEEE----------EEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEE
Q 026221 91 RLLLHGQQYMELYKPFPSSASIRNEACIAG----------LHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~----------v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~ 154 (241)
..+|=.+-+++|++|... .+.+++++.+ +..+|| ..++++.++++ +|+++++.+.++..
T Consensus 68 ~~~vt~~~~i~yl~P~~~--~~~a~~~~~~~~~~~~~~~~l~~~gr-~~~~~~~~v~~--~~~lvA~~~g~~~~ 136 (138)
T TIGR02447 68 GDIVIADSHIRYLAPVTG--DPVANCEAPDLESWEAFLATLQRGGK-ARVKLEAQISS--DGKLAATFSGEYVA 136 (138)
T ss_pred CcEEEEEeeeEEcCCcCC--CeEEEEEcCCHHHHHHHHHHHHhCCc-eEEEEEEEEEE--CCEEEEEEEEEEEE
Confidence 356777999999999975 3666666643 222334 55566777775 67999999988875
No 78
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=87.88 E-value=5.5 Score=31.30 Aligned_cols=59 Identities=12% Similarity=0.038 Sum_probs=43.2
Q ss_pred CcceeeeeEEEEeccCCC-CCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEE
Q 026221 91 RLLLHGQQYMELYKPFPS-SASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~-gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~ 154 (241)
.+.|=+-..++|++|..+ ||+|+.++++.... ++ .+...+++++. +|++|++.+.+++.
T Consensus 77 ~g~l~~i~~~~f~~~v~p~Gd~l~i~~~~~~~~--~~-~~~~~~~~~~v--~~~~va~a~l~~~~ 136 (138)
T cd01289 77 PGFLLGSRKYEAHVDRFDLGSTLLIVVAELLQG--DS-GLGVFECTIED--QGGVLASGRLNVYQ 136 (138)
T ss_pred cEEEEEEEEEEEEcceeCCCCeeEEEeeeeeeC--CC-cEEEEEEEEEE--CCEEEEEEEEEEEc
Confidence 456777899999999655 99999988876533 22 34455666654 68999999988764
No 79
>TIGR01749 fabA beta-hydroxyacyl-[acyl carrier protein] dehydratase FabA. This enzyme, FabA, shows overlapping substrate specificity with FabZ with regard to chain length in fatty acid biosynthesis. It is commonly designated 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) as if it were specific for that chain length, but its specificity is broader; it is active even in the initiation of fatty acid biosynthesis. This enzyme can also isomerize trans-2-decenoyl-ACP to cis-3-decenoyl-ACP to bypass reduction by FabI and instead allow biosynthesis of unsaturated fatty acids. FabA cannot elongate unsaturated fatty acids.
Probab=86.71 E-value=5 Score=33.00 Aligned_cols=55 Identities=7% Similarity=-0.000 Sum_probs=40.7
Q ss_pred ceeeeeEEEEeccCCCCCEE-EEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEE
Q 026221 93 LLHGQQYMELYKPFPSSASI-RNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRM 150 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l-~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~s 150 (241)
.+=+-.+++|++|+.+||++ +.++++..+....+ .++..+++++- +|+++++.+.
T Consensus 102 ~l~gi~~~kfr~~v~Pgd~~~~l~v~i~~~~~~~~-~~~~~~~~i~v--~g~~va~a~~ 157 (169)
T TIGR01749 102 RALGVGEVKFTGQVLPTAKKVTYRIHFKRVINRRL-VMGIADGEVLV--DGRLIYTASD 157 (169)
T ss_pred EEeeccEEEEccCEecCCeEEEEEEEEEEEeecCC-cEEEEEEEEEE--CCEEEEEEEC
Confidence 34455799999999999996 88888888764433 35566777764 7888888653
No 80
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=85.30 E-value=4.3 Score=35.34 Aligned_cols=60 Identities=12% Similarity=0.207 Sum_probs=43.1
Q ss_pred CcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEe
Q 026221 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 155 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~r 155 (241)
..+.=.++.+.||+|++.++-+-.+++....- .|+| .++++++| ++|++|++....-++|
T Consensus 212 ~~~aSldhtv~fh~~~~~~~W~l~~~~s~~~~-~Grg---~~~~~l~d-~~G~lvAs~~Qe~l~r 271 (271)
T TIGR00189 212 SMAASLDHSIWFHRPFRADDWLLYKCSSPSAS-GSRG---LVEGKIFT-RDGVLIASTVQEGLVR 271 (271)
T ss_pred cEEEeeeeeEEEeCCCCCCeeEEEEEEecccc-CCce---EEEEEEEC-CCCCEEEEEEeeeecC
Confidence 44567789999999988888877776654321 2232 23578887 6999999998776654
No 81
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=84.05 E-value=5.6 Score=35.56 Aligned_cols=65 Identities=11% Similarity=0.132 Sum_probs=51.2
Q ss_pred CCCCcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEecc
Q 026221 88 HDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (241)
Q Consensus 88 ~d~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~ 157 (241)
.+..++.=..+.+.||||++.+|-|-...+..+.+. ++| -++..+++ ++|+++|+....-++|..
T Consensus 221 ~~~~~~aSLDHs~wFhrp~~~ddWlLy~~~sp~A~~-~rg---l~~G~lf~-r~G~LiA~~~QEG~~r~~ 285 (289)
T COG1946 221 TPGIQVASLDHSMWFHRPFRLDDWLLYAQESPSASG-GRG---LVRGQLFD-RDGQLIASVVQEGLIRYH 285 (289)
T ss_pred cCcceEeeccceEEEeccccCCCEEEEEeeCCcccC-Ccc---eeeeEEEc-CCCCEEEEEeeeEEEecc
Confidence 466778888999999999999999888877766552 233 23677777 699999999988888853
No 82
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=82.02 E-value=14 Score=30.16 Aligned_cols=56 Identities=16% Similarity=0.133 Sum_probs=34.1
Q ss_pred eEEEEeccCCCCCEEEEEEEEEEEEEcCC-cEEEEEEEEEEecCCC--cEEEEEEEEEEEec
Q 026221 98 QYMELYKPFPSSASIRNEACIAGLHDKGK-AAILEIETKSYNAESG--ELLCMNRMTAFLRG 156 (241)
Q Consensus 98 q~~~~~rPi~~gd~l~~~~~i~~v~dkg~-G~~v~~~~~~~~~~~G--e~V~~~~st~~~rg 156 (241)
.++.|.+|++.||.|.+.+++..+ |+ ..-|.++....+..+| +.+.+..-+++...
T Consensus 62 d~v~F~~Pv~vGd~v~~~a~v~~~---GrTSm~V~Vev~~~~~~~~~~~~~t~~~ft~VAvd 120 (157)
T COG1607 62 DSVDFKKPVRVGDIVCLYARVVYT---GRTSMEVGVEVWAEDIRSGERRLATSAYFTFVAVD 120 (157)
T ss_pred ceEEEccccccCcEEEEEEEEeec---CcccEEEEEEEEEecccCCcceEeeeEEEEEEEEC
Confidence 468899999999999999998654 33 2334444443332233 34444555555443
No 83
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=81.64 E-value=8.8 Score=34.08 Aligned_cols=61 Identities=13% Similarity=0.115 Sum_probs=44.2
Q ss_pred CcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEec
Q 026221 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRG 156 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg 156 (241)
..+.=.++.|.||+|+.++|-+-.+.+.... +.|.- ..+.++++ ++|++|++....-++|-
T Consensus 224 ~~~aSLdhsi~Fh~~~~~d~W~L~~~~s~~a---~~gr~-~~~g~i~~-~~G~LvAs~~Qegl~r~ 284 (286)
T PRK10526 224 MQIATIDHSMWFHRPFNLNEWLLYSVESTSA---SSARG-FVRGEFYT-QDGVLVASTVQEGVMRN 284 (286)
T ss_pred ceEEeeeEeEEEeCCCCCCceEEEEEECCcc---cCCce-EEEEEEEC-CCCCEEEEEEeeEEEEe
Confidence 3455779999999999988887776655332 22222 23568887 69999999999888874
No 84
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=81.60 E-value=12 Score=27.89 Aligned_cols=60 Identities=13% Similarity=0.128 Sum_probs=40.5
Q ss_pred CCCcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 026221 89 DPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (241)
Q Consensus 89 d~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~ 153 (241)
+.....=.++.+.||+|....+-+-.+.+... .++-....+.++++ ++|++|++....-+
T Consensus 44 ~~~~~aSldhsi~Fh~~~~~~~W~l~~~~~~~----~~~gr~~~~~~l~~-~~G~LvAs~~Q~~l 103 (104)
T cd03444 44 DASASASLDHAIWFHRPFRADDWLLYEQRSPR----AGNGRGLVEGRIFT-RDGELVASVAQEGL 103 (104)
T ss_pred cCcceEeeeEEEEEeCCCCCCceEEEEEECcc----ccCCeeEEEEEEEC-CCCCEEEEEEEeee
Confidence 44556677999999999877655555544432 22233344788888 69999999886543
No 85
>PRK10694 acyl-CoA esterase; Provisional
Probab=81.38 E-value=11 Score=29.53 Aligned_cols=56 Identities=11% Similarity=0.060 Sum_probs=34.1
Q ss_pred eEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEe-----cCCCc--EEEEEEEEEEEecc
Q 026221 98 QYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYN-----AESGE--LLCMNRMTAFLRGA 157 (241)
Q Consensus 98 q~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~-----~~~Ge--~V~~~~st~~~rg~ 157 (241)
..+.|++|++.||.|+++++|..+- + ..++++.+++. +..|+ ++++...|++...+
T Consensus 60 d~i~F~~Pv~~Gd~l~~~a~V~~~g---~-sS~~v~v~v~~~~~~~~~~g~~~~~~~~~~tfVavd~ 122 (133)
T PRK10694 60 EGMTFLRPVAVGDVVCCYARCVKTG---T-TSISINIEVWVKKVASEPIGQRYKATEALFTYVAVDP 122 (133)
T ss_pred CceEECCCcccCcEEEEEEEEEEcc---C-ceEEEEEEEEEeecccCCCCcEEEEEEEEEEEEEECC
Confidence 3679999999999999999995543 2 22333333321 11233 45666667766543
No 86
>PLN02647 acyl-CoA thioesterase
Probab=78.26 E-value=18 Score=34.34 Aligned_cols=60 Identities=13% Similarity=0.159 Sum_probs=40.2
Q ss_pred eEEEEeccCCCCCEEEEEEEEEEEEEcCCc---EEEEEEEEEEecCC--CcEEEEEEEEEEEecc
Q 026221 98 QYMELYKPFPSSASIRNEACIAGLHDKGKA---AILEIETKSYNAES--GELLCMNRMTAFLRGA 157 (241)
Q Consensus 98 q~~~~~rPi~~gd~l~~~~~i~~v~dkg~G---~~v~~~~~~~~~~~--Ge~V~~~~st~~~rg~ 157 (241)
..+.|.+|++.|+.|..+++|.-......| ..+.+.+.+.+.+. ++++.+...|++....
T Consensus 339 d~v~F~~PV~vGdil~l~A~V~yt~~~s~g~~~i~veV~v~v~~~~~~~~~~~n~~~fTfva~d~ 403 (437)
T PLN02647 339 DHVDFLRPVDVGDFLRFKSCVLYTELENSEQPLINVEVVAHVTRPELRSSEVSNTFYFTFTVRPE 403 (437)
T ss_pred cceEecCccccCcEEEEEEEEEEEeEEecCceEEEEEEEEEEEcCCCCcceEEEEEEEEEEEecc
Confidence 468899999999999999999876654322 33444444444323 3466677777777654
No 87
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=75.00 E-value=28 Score=30.33 Aligned_cols=60 Identities=20% Similarity=0.162 Sum_probs=42.2
Q ss_pred eeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEecc
Q 026221 94 LHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGA 157 (241)
Q Consensus 94 vHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~ 157 (241)
|-....|+++|+..-||++++++.+.+.. +....-..++++.++|+++++..|..++--.
T Consensus 62 vl~r~~i~i~r~P~~~e~i~i~Tw~~~~~----~~~~~R~f~i~d~~~G~~l~~a~s~WvliD~ 121 (261)
T PF01643_consen 62 VLSRYQIEIHRYPRWGEKITIETWPSGFK----RFFAYRDFEIYDAEDGELLARATSIWVLIDL 121 (261)
T ss_dssp EEEEEEEEESS--BTT-EEEEEEEEEEE-----SSEEEEEEEEE--TTS-EEEEEEEEEEEEET
T ss_pred EEEEEEEEEEecCCCCCEEEEEEEeccCC----CcEEEEEEEEEECCCCcEEEEEEEEEEEEEh
Confidence 56689999999999999999999998754 2444556676652489999999999887644
No 88
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=71.30 E-value=53 Score=27.92 Aligned_cols=56 Identities=18% Similarity=0.228 Sum_probs=37.5
Q ss_pred eeeeeEEEEe-ccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEE
Q 026221 94 LHGQQYMELY-KPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFL 154 (241)
Q Consensus 94 vHgeq~~~~~-rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~ 154 (241)
.=.+..++|| .|...++-|-++.+...+. .|. ...+.++++ ++|++|++.....++
T Consensus 199 ~tld~ti~f~~~p~~~~~Wl~~~~~~~~~~---~Gr-~~~~~~l~d-~~G~lvA~~~Q~~lv 255 (255)
T PF13622_consen 199 ATLDHTIHFHRLPFDGDEWLLLEARSPRAG---NGR-ALMEGRLWD-EDGRLVASSRQEALV 255 (255)
T ss_dssp EEEEEEEEECSHCCTTTS-EEEEEEEEEEE---TTE-EEEEEEEEE-TTS-EEEEEEEEEE-
T ss_pred ccceeEEEEEeCCccCCceEEEEEEEeEeC---CCE-EEEEEEEEC-CCCCEEEEEEEEeeC
Confidence 3667777764 4766788888888765544 333 334788888 699999999877653
No 89
>PF02551 Acyl_CoA_thio: Acyl-CoA thioesterase; InterPro: IPR003703 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH). They consequently have the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. They may also be involved in the metabolic regulation of peroxisome proliferation. Thioesters play a central role in cells as they participate in metabolism, membrane synthesis, signal transduction, and gene regulation. Thioesterases catalyse the hydrolysis of thioesters to the thiol and carboxylic acid components. Many thioesterases have a hot dog fold, including YciA from Escherichia coli and its close sequence homologue HI0827 from Haemophilus influenzae (HiYciA) []. In Helicobacter pylori, YbgC also belongs to the hot-dog family of proteins, with a epsilongamma tetrameric arrangement []. YbgC proteins are bacterial acyl-CoA thioesterases associated with the Tol-Pal system. This system is important for cell envelope integrity and is part of the cell division machinery. However, the E. coli thioesterase II reveals a new tertiary fold: a 'double hot dog'. It has an internal repeat with a basic unit that is structurally similar to the recently described beta-hydroxydecanoyl thiol ester dehydrase []. ; GO: 0016291 acyl-CoA thioesterase activity, 0006637 acyl-CoA metabolic process; PDB: 1C8U_B 1TBU_B 3U0A_B.
Probab=70.32 E-value=43 Score=26.47 Aligned_cols=59 Identities=12% Similarity=0.139 Sum_probs=35.8
Q ss_pred CCCCCCcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEE-ecCCCcEEEEEEE
Q 026221 86 LQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSY-NAESGELLCMNRM 150 (241)
Q Consensus 86 ~~~d~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~-~~~~Ge~V~~~~s 150 (241)
+..+...+ =.++++=||||+...+.|-...+- -...+.-.++ +.+++ + ++|++|++...
T Consensus 69 ~~~~~~~v-SlDHs~wFHrpfr~ddWlLY~~~s--p~A~~~Rgl~--~G~~f~~-q~G~Lvas~~Q 128 (131)
T PF02551_consen 69 FGFPKFQV-SLDHSMWFHRPFRADDWLLYAIES--PSASGGRGLV--RGRFFDT-QDGELVASVVQ 128 (131)
T ss_dssp CCCCCEEE-EEEEEEEE-S--BTTS-EEEEEEE--EEEETTEEEE--EECCEEE-CTTEEEEEEEE
T ss_pred ccccccEE-ecceeEEEcCCCCCCCCEEEEEEc--CccccCcccc--cCceEec-CCCCEEEEEec
Confidence 34444555 789999999999999987665443 2333322232 56666 5 79999999754
No 90
>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein. The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.
Probab=69.01 E-value=41 Score=26.94 Aligned_cols=66 Identities=14% Similarity=0.184 Sum_probs=38.2
Q ss_pred CCCCCCCcceeeeeEEEEeccCCCCCEEEEEEEEEE------EEEc---CCcEEEEEEEEEEecCCCcEEEEEEEEEEEe
Q 026221 85 GLQHDPRLLLHGQQYMELYKPFPSSASIRNEACIAG------LHDK---GKAAILEIETKSYNAESGELLCMNRMTAFLR 155 (241)
Q Consensus 85 ~~~~d~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~------v~dk---g~G~~v~~~~~~~~~~~Ge~V~~~~st~~~r 155 (241)
+.+++ ..+|=.+.+|+|++|+.. .+++++++.+ ..++ ++-+-+.+++++++ +|+.+++-+..+++.
T Consensus 69 e~~~~-~~IVi~~~~i~Y~~Pv~~--d~~A~~~~~~~~~~~~~~~~l~~~grari~l~~~i~~--~~~~~a~f~G~yv~l 143 (144)
T PF09500_consen 69 EAGLN-GDIVIADSNIRYLKPVTG--DFTARCSLPEPEDWERFLQTLARGGRARITLEVEIYS--GGELAAEFTGRYVAL 143 (144)
T ss_dssp HHT----EEEEEEEEEEE-S---S----EEEEE-------S---GGGGCTS-EEEEEEEEEEE--TTEEEEEEEEEEEEE
T ss_pred HhCCC-CcEEEEeCceEEcCCCCC--CcEEEEeccccchhHHHHHHHHcCCcEEEEEEEEEEE--CCEEEEEEEEEEEEE
Confidence 33555 678889999999999965 3667776662 1111 22377888999886 688888888887753
No 91
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=61.74 E-value=84 Score=25.35 Aligned_cols=64 Identities=14% Similarity=0.192 Sum_probs=46.7
Q ss_pred CcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEeccC
Q 026221 91 RLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAG 158 (241)
Q Consensus 91 ~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~g 158 (241)
.+.|=.+-++.|..|-..|+.|..++++.. .||. +-.++.++++..+|+..+..+-+.+++...
T Consensus 80 ~~gvsvdLsvsyL~~AklGe~l~i~a~~vr---~Gk~-la~t~v~l~~K~t~kiia~grhtk~~~~~~ 143 (148)
T KOG3328|consen 80 KPGVSVDLSVSYLSSAKLGEELEIEATVVR---VGKT-LAFTDVELRRKSTGKIIAKGRHTKYFRPAS 143 (148)
T ss_pred CCceEEEEEhhhccccCCCCeEEEEEEEee---cCce-EEEEEEEEEEcCCCeEEEecceEEEeecCC
Confidence 445566677888999999999999998854 3453 333355555556899999999888887654
No 92
>PF14765 PS-DH: Polyketide synthase dehydratase; PDB: 3KG7_D 3KG9_A 3KG8_B 3HRR_A 3HRQ_A 3EL6_A 3KG6_B 2VZ8_A 2VZ9_A.
Probab=60.60 E-value=76 Score=27.32 Aligned_cols=60 Identities=13% Similarity=0.237 Sum_probs=42.5
Q ss_pred CCCcceeeeeEEEEec-cCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEE
Q 026221 89 DPRLLLHGQQYMELYK-PFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAF 153 (241)
Q Consensus 89 d~~~lvHgeq~~~~~r-Pi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~ 153 (241)
+-..+-.+=.++++++ |.+.++.+.+.+++ .+.++..++....++| ++|+++++...-.+
T Consensus 226 ~~~~lP~~i~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~dv~v~d-~~G~~~~~~~gl~~ 286 (295)
T PF14765_consen 226 GRVFLPVSIERIRIFRAPPPPGDRLYVYARL----VKSDDDTITGDVTVFD-EDGRVVAELEGLTF 286 (295)
T ss_dssp TSEEEEEEEEEEEESSS--SSTSEEEEEEEE----ESTTTTEEEEEEEEEE-TTSBEEEEEEEEEE
T ss_pred CCEEcccEeCEEEEEeccCCCCCEEEEEEEE----ecccceEEEEEEEEEC-CCCCEEEEEccEEE
Confidence 3344556668899995 88899999999998 3334456667788888 69999998876444
No 93
>PF10862 FcoT: FcoT-like thioesterase domain; InterPro: IPR022598 Proteins in this family have a HotDog fold. This family was formerly known as DUF2662. The structure of Rv0098 from M. tuberculosis [] suggested a thioesterase function. Assays showed that this protein was a thioesterase with a preference for long chain fatty acyl groups []. The maximal Kcat was observed for palmitoyl-CoA, although longer and shorter molecules were also cleaved. In solution this protein forms a homo-hexameric complex.; PDB: 2PFC_A 3B18_A.
Probab=55.62 E-value=83 Score=25.59 Aligned_cols=53 Identities=11% Similarity=0.223 Sum_probs=33.4
Q ss_pred CCcceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCc---EEEEEEEEEEecCCCc
Q 026221 90 PRLLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKA---AILEIETKSYNAESGE 143 (241)
Q Consensus 90 ~~~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G---~~v~~~~~~~~~~~Ge 143 (241)
|..+|=.+-+-+|+|||.+ -.++.+..+.+++.+.+. .++.++...+|++.|+
T Consensus 93 LsdilI~~~~S~Frr~i~~-~~F~g~~~~~~~~~~~~~~~~l~l~t~~~F~D~~GG~ 148 (157)
T PF10862_consen 93 LSDILITSFKSRFRRPINP-RHFSGELEVTDMRVRDRTWPYLFLSTECRFWDDDGGR 148 (157)
T ss_dssp HHHEEEEEE-EEE-S---T-TSEEEEEEEE--EEE-SSS-EEEEEEEEEEE-----E
T ss_pred cCceeEeechhhhhcccCc-ceEEEEEEEEEEEEeccCCceEEEeeEEEEEeCCCCc
Confidence 5678888889999999965 678999999999999887 7788888888854443
No 94
>PLN02868 acyl-CoA thioesterase family protein
Probab=50.92 E-value=47 Score=30.92 Aligned_cols=55 Identities=15% Similarity=0.074 Sum_probs=38.9
Q ss_pred cceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEE
Q 026221 92 LLLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMT 151 (241)
Q Consensus 92 ~lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st 151 (241)
.+.=..+.+.||+|+...+.+-.+.+.... +.|. -..+.++++ ++|++|++....
T Consensus 356 ~~aSLdhsi~Fh~~~~~d~W~l~~~~s~~a---~~gr-~~~~g~l~~-~~G~LvAs~~Qe 410 (413)
T PLN02868 356 AALSLDHSMWFHRPFRADDWLLFVIVSPAA---HNGR-GFATGHMFN-RKGELVVSLTQE 410 (413)
T ss_pred EEEEcceeEEEecCCCCCceEEEEEECCcc---CCCc-ceEEEEEEC-CCCCEEEEEEee
Confidence 356677899999999888877766655433 2222 223588887 699999998754
No 95
>COG1480 Predicted membrane-associated HD superfamily hydrolase [General function prediction only]
Probab=46.35 E-value=6.6 Score=39.06 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=29.2
Q ss_pred CCCCcCC-CCH---------------HHHHHcCCCCceE------ecceeeeeccc
Q 026221 207 GDYNPLH-SDP---------------MVAKAAGSVLNHN------YKTELVNYYFH 240 (241)
Q Consensus 207 GD~NPiH-~d~---------------~~Ak~~Gf~~~i~------h~~~~~~~~~~ 240 (241)
|+-||.| +|| +.||..++|+.|. |||.++.|+||
T Consensus 539 ~g~N~Hd~lsP~lSa~II~sHv~eGv~mar~y~lPq~iidii~eHhGTsLikYFY~ 594 (700)
T COG1480 539 GGKNPHDDLSPQLSALIIISHVKEGVEMAREYKLPQEIIDIIPEHHGTSLIKYFYY 594 (700)
T ss_pred CCCCCcccCCHHHHHHHHHHhhhhHHHHHHHcCCCHHHHHHHHHhcCccHHHHHHH
Confidence 8889988 776 4689999999877 99999998875
No 96
>PLN02647 acyl-CoA thioesterase
Probab=44.02 E-value=1.5e+02 Score=28.14 Aligned_cols=57 Identities=12% Similarity=0.200 Sum_probs=37.9
Q ss_pred eEEEEeccCCCCCEEEEEEEEEEEEEcCC-cEEEEEEEEEEec--CCC--cEEEEEEEEEEEecc
Q 026221 98 QYMELYKPFPSSASIRNEACIAGLHDKGK-AAILEIETKSYNA--ESG--ELLCMNRMTAFLRGA 157 (241)
Q Consensus 98 q~~~~~rPi~~gd~l~~~~~i~~v~dkg~-G~~v~~~~~~~~~--~~G--e~V~~~~st~~~rg~ 157 (241)
.++.|++|+..|+.|.+.++|+-+ |+ -..|.++....+. .+| .++++...|++.+..
T Consensus 150 D~i~F~~Pi~~g~~v~l~g~Vt~v---GrSSMEV~v~V~~~~~~~~~~~~~~~~~a~FtfVA~D~ 211 (437)
T PLN02647 150 DKIVLKKPIRVDVDLKIVGAVTWV---GRSSMEIQLEVIQPTKDESNTSDSVALTANFTFVARDS 211 (437)
T ss_pred CcEEEcCCCcCCcEEEEEEEEEEe---cCCeEEEEEEEEEccccCCCCcEEEEEEEEEEEEEEcC
Confidence 468899999999999999999764 33 2333333332110 112 368888888998876
No 97
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=39.34 E-value=2.3e+02 Score=23.84 Aligned_cols=55 Identities=9% Similarity=0.208 Sum_probs=33.1
Q ss_pred eeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEeccC
Q 026221 97 QQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLRGAG 158 (241)
Q Consensus 97 eq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~rg~g 158 (241)
.-.+.|.+|..++ .++.++++. + .|| .+-.++.+++ ++|.++++.+.++..+..+
T Consensus 38 s~~~~fl~p~~~~-~~~~~v~~~--r-~Gr-~~~~~~v~~~--q~~~~~~~a~~~f~~~~~~ 92 (255)
T PF13622_consen 38 SLHVYFLRPVPPG-PVEYRVEVL--R-DGR-SFSTRQVELS--QDGKVVATATASFGRPEPG 92 (255)
T ss_dssp EEEEEESS--BSC-EEEEEEEEE--E-ESS-SEEEEEEEEE--ETTEEEEEEEEEEE--TTT
T ss_pred EEEeEeccccccC-CEEEEEEEe--e-CCC-cEEEEEEEEE--ECCcCEEEEEEEEccCcCC
Confidence 5567899999998 877777664 3 344 2333344544 4788888888776655443
No 98
>COG5496 Predicted thioesterase [General function prediction only]
Probab=38.76 E-value=1.9e+02 Score=22.73 Aligned_cols=57 Identities=12% Similarity=0.175 Sum_probs=41.7
Q ss_pred ceeeeeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEEEEEe
Q 026221 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMTAFLR 155 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st~~~r 155 (241)
-|=.|-.++-.+|+++|.+++..+++..+. |+..-+.++.. ++|+.+-+.+-+-++.
T Consensus 58 tVG~ev~vrHla~~~~G~~V~i~~~l~~v~--Gr~v~f~i~a~----~~~~~Ig~g~h~R~iv 114 (130)
T COG5496 58 TVGTEVLVRHLAATPPGLTVTIGARLEKVE--GRKVKFRIIAM----EGGDKIGEGTHTRVIV 114 (130)
T ss_pred eeeEEEEeeeccCCCCCCeEEEEEEEEEEe--ccEEEEEEEEe----eCCcEEeeeEEEEEEe
Confidence 355566677779999999999999998876 44444555554 3788888888766654
No 99
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=35.78 E-value=2.1e+02 Score=24.73 Aligned_cols=51 Identities=16% Similarity=0.109 Sum_probs=30.1
Q ss_pred eeEEEEeccCCCCCEEEEEEEEEEEEEcCCcEEEEEEEEEEecCCCcEEEEEEEE
Q 026221 97 QQYMELYKPFPSSASIRNEACIAGLHDKGKAAILEIETKSYNAESGELLCMNRMT 151 (241)
Q Consensus 97 eq~~~~~rPi~~gd~l~~~~~i~~v~dkg~G~~v~~~~~~~~~~~Ge~V~~~~st 151 (241)
+-+|.|.+.+..||++++...+. .......+.+.-.+.+ ++|+.+|...+.
T Consensus 208 ~i~I~y~~E~~~gd~i~~~~~~~---~~~~~~~~~~~h~i~~-~~g~~~~~~~~~ 258 (261)
T PF01643_consen 208 SIDINYKKEIRYGDTITSYTEVE---KDEEEDGLSTLHEIRN-EDGEEVARARTE 258 (261)
T ss_dssp EEEEEE-S--BTT-EEEEEEEEE---EECCTTEEEEEEEEEC-T-TCEEEEEEEE
T ss_pred EEEEEEccccCCCCEEEEEEEEc---ccccCCceEEEEEEEc-CCCceEEEEEEE
Confidence 56788999999999999887776 2222222333344555 359999988764
No 100
>PF10738 Lpp-LpqN: Probable lipoprotein LpqN; InterPro: IPR019674 This protein is conserved in Mycobacteriaceae and is likely to be a lipoprotein [].
Probab=34.18 E-value=16 Score=30.22 Aligned_cols=41 Identities=22% Similarity=0.255 Sum_probs=28.7
Q ss_pred CCcceeeeeecCCCCcC----CC-------------CHHHHHHcCCCCceEecceeee
Q 026221 196 QPSQALVYRLSGDYNPL----HS-------------DPMVAKAAGSVLNHNYKTELVN 236 (241)
Q Consensus 196 ~~~qa~~yrlSGD~NPi----H~-------------d~~~Ak~~Gf~~~i~h~~~~~~ 236 (241)
+--+..++||+||+.|- |- +...+...|||..++.|+|..+
T Consensus 67 Pnavv~V~kL~G~~Dp~e~l~~a~~d~~~l~g~~~~~~s~~~~~GfpS~~i~GtY~~~ 124 (175)
T PF10738_consen 67 PNAVVTVSKLTGDFDPAEALEHAPADAQNLPGFRELDGSPSDFSGFPSSQIEGTYDKD 124 (175)
T ss_pred CceEEEEEeccCCCCHHHHHHhchhhHhhCcCcccccCCccccCCCceeEEEEEEeeC
Confidence 33456788999998874 22 2233455789999999999865
No 101
>PF06950 DUF1293: Protein of unknown function (DUF1293); InterPro: IPR009712 This entry is represented by Vibrio phage Vf33, Vpf117. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several bacterial and phage proteins of around 115 residues in length. The function of this family is unknown.
Probab=26.31 E-value=35 Score=26.01 Aligned_cols=18 Identities=44% Similarity=0.364 Sum_probs=15.6
Q ss_pred ecCCCC-----cCCCCHHHHHHc
Q 026221 205 LSGDYN-----PLHSDPMVAKAA 222 (241)
Q Consensus 205 lSGD~N-----PiH~d~~~Ak~~ 222 (241)
.|||.| |||+|..+|+..
T Consensus 45 ~~tdvnP~~kqpL~I~~~YA~~L 67 (115)
T PF06950_consen 45 ESTDVNPQNKQPLRIDHDYAKKL 67 (115)
T ss_pred cccccCcCCCCCeEecHHHHHHH
Confidence 699997 699999999864
No 102
>PF13389 DUF4107: Protein of unknown function (DUF4107)
Probab=20.50 E-value=35 Score=27.07 Aligned_cols=6 Identities=33% Similarity=1.248 Sum_probs=4.9
Q ss_pred eecccC
Q 026221 236 NYYFHY 241 (241)
Q Consensus 236 ~~~~~~ 241 (241)
.|||||
T Consensus 133 SNWyHY 138 (158)
T PF13389_consen 133 SNWYHY 138 (158)
T ss_pred ccceec
Confidence 589998
No 103
>TIGR02722 lp_ uncharacterized proteobacterial lipoprotein. Members of this protein family are restricted to the Proteobacteria, and all are predicted lipoproteins. In genomes that contain the thiK gene for the salvage enzyme thiamin kinase, the member of this family is encoded nearby.
Probab=20.45 E-value=4.7e+02 Score=21.53 Aligned_cols=43 Identities=9% Similarity=0.169 Sum_probs=31.7
Q ss_pred CCEEEEEEEEEEEEEc-CCcEE--EEEEEEEEecCCCcEEEEEEEE
Q 026221 109 SASIRNEACIAGLHDK-GKAAI--LEIETKSYNAESGELLCMNRMT 151 (241)
Q Consensus 109 gd~l~~~~~i~~v~dk-g~G~~--v~~~~~~~~~~~Ge~V~~~~st 151 (241)
|-.+....+|.+...+ +++.. +.+.-++.+-++|+.||.....
T Consensus 141 gADy~L~G~I~~~~~~~~~~~~~~~~~~l~Lvd~~TG~ivWs~~~~ 186 (189)
T TIGR02722 141 GADYSLYGKISSIVKSDGSRKLVYYKFTMQLMDLKTGLIVWSDEKP 186 (189)
T ss_pred CCCEEEEEEEEEEEeecCCCceEEEEEEEEEEEcCcceEEEecceE
Confidence 4467888888888776 54443 6677777777899999987654
No 104
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=20.29 E-value=3.9e+02 Score=20.20 Aligned_cols=58 Identities=10% Similarity=0.084 Sum_probs=37.4
Q ss_pred ceeeeeEEEEeccCCCCCEEEEEEEEEEEEEc-CCcEEEEEEEEEEecCCCcEEEEEEEEE
Q 026221 93 LLHGQQYMELYKPFPSSASIRNEACIAGLHDK-GKAAILEIETKSYNAESGELLCMNRMTA 152 (241)
Q Consensus 93 lvHgeq~~~~~rPi~~gd~l~~~~~i~~v~dk-g~G~~v~~~~~~~~~~~Ge~V~~~~st~ 152 (241)
.+=.+-+++|.++....-.+.++.++..-..+ ++..-..++.+++ ++|+++++...++
T Consensus 72 ~~~~~l~~~f~~~~e~~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~--q~g~~~a~~~~~~ 130 (132)
T PF03756_consen 72 FVLTSLDFTFSRFAELDVPADLTVRITCRDRRGGRPRGLRFRVTVS--QGGRVVATASMTF 130 (132)
T ss_pred EEEEEEEEEEccccccCCCEEEEEEEEeccccCCccceEEEEEEEE--ECCEEEEEEEEEE
Confidence 44447788888887655566666666543333 3334455666665 4899999988765
Done!