BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026223
(241 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9XG77|PSA6_TOBAC Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2
SV=1
Length = 246
Score = 458 bits (1179), Expect = e-128, Method: Compositional matrix adjust.
Identities = 222/246 (90%), Positives = 232/246 (94%), Gaps = 5/246 (2%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 55
MSRGSGGGYDRHITIFSPEGRLFQV AVKAAG+TSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGGGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 56 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 115
LD TSV+HLFPITKYLGLLATGMTADARTLVQQAR EAAEFRFKYGYEMPVDVL+KWIAD
Sbjct: 61 LDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIAD 120
Query: 116 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 175
KSQVYTQHAYMRPLGVVAM+L IDEE GP+LFKCDPAGHFFGHKATSAG KEQEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLE 180
Query: 176 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
KKMKNDPAF+++ETVQTAIS LQSVLQEDFKASEIEVGVV KE+P FRVL+ EEIDEHLT
Sbjct: 181 KKMKNDPAFSYEETVQTAISALQSVLQEDFKASEIEVGVVKKEDPIFRVLTTEEIDEHLT 240
Query: 236 AISERD 241
AISERD
Sbjct: 241 AISERD 246
>sp|O48551|PSA6_SOYBN Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2
Length = 246
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 217/246 (88%), Positives = 233/246 (94%), Gaps = 5/246 (2%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 55
MSRGSGGGY+RHITIFSPEGRLFQV AVKAAG+TSIGVRGKDS+CVVT KKVPDKL
Sbjct: 1 MSRGSGGGYNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKL 60
Query: 56 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 115
LD+TSVTHLFPITKYLGLLATGMTADARTLVQQAR EAAEFRF YGYEMPVDVLAKWIAD
Sbjct: 61 LDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIAD 120
Query: 116 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 175
KSQVYTQHAYMRPLGVVAMVL ID+E GP+L+KCDPAGH+FGHKATSAGLK+QEAINFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLE 180
Query: 176 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
KKMKNDP+FT++ETVQTAIS LQSVLQEDFKA+EIEVGVV K+NPEFRVL+ +EIDEHLT
Sbjct: 181 KKMKNDPSFTYEETVQTAISALQSVLQEDFKATEIEVGVVRKDNPEFRVLTTDEIDEHLT 240
Query: 236 AISERD 241
AISERD
Sbjct: 241 AISERD 246
>sp|O81146|PSA6A_ARATH Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1
PE=1 SV=2
Length = 246
Score = 438 bits (1126), Expect = e-122, Method: Compositional matrix adjust.
Identities = 207/246 (84%), Positives = 226/246 (91%), Gaps = 5/246 (2%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 55
MSRGSG GYDRHITIFSPEGRLFQV AVK AG+TSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 56 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 115
LD +SVTHLFPITKY+GL+ATG+TADAR+LVQQAR +AAEFRF YGYEMPVD+LAKWIAD
Sbjct: 61 LDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIAD 120
Query: 116 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 175
KSQVYTQHAYMRPLGVVAMV+ +DEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLE 180
Query: 176 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
KKMK +P+FTF ETVQTAIS LQSVLQEDFKA+EIEVGVV ENPEFR L+ EEI+EHLT
Sbjct: 181 KKMKENPSFTFDETVQTAISALQSVLQEDFKATEIEVGVVRAENPEFRALTTEEIEEHLT 240
Query: 236 AISERD 241
AISERD
Sbjct: 241 AISERD 246
>sp|O81147|PSA6B_ARATH Proteasome subunit alpha type-6-B OS=Arabidopsis thaliana GN=PAA2
PE=1 SV=1
Length = 246
Score = 435 bits (1119), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/246 (84%), Positives = 225/246 (91%), Gaps = 5/246 (2%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 55
MSRGSG GYDRHITIFSPEGRLFQV AVKAAG+TSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGSGAGYDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKL 60
Query: 56 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 115
LD +SV+HLFP+TKYLGLLATGMTAD+R+LVQQAR EAAEFRF+YGYEMP D+LAKWIAD
Sbjct: 61 LDQSSVSHLFPVTKYLGLLATGMTADSRSLVQQARNEAAEFRFQYGYEMPADILAKWIAD 120
Query: 116 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 175
KSQVYTQHAYMRPLGVVAMVL IDEE GP L+KCDPAGHF+GHKATSAG+KEQEA+NFLE
Sbjct: 121 KSQVYTQHAYMRPLGVVAMVLGIDEERGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLE 180
Query: 176 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
KKMK +PAFT+ ETVQTAIS LQSVLQEDFKA+EIEVGVV ++P FR L EEIDEHLT
Sbjct: 181 KKMKENPAFTYDETVQTAISALQSVLQEDFKATEIEVGVVRADDPLFRSLRTEEIDEHLT 240
Query: 236 AISERD 241
AISERD
Sbjct: 241 AISERD 246
>sp|Q9LSU3|PSA6_ORYSJ Proteasome subunit alpha type-6 OS=Oryza sativa subsp. japonica
GN=PAA1 PE=2 SV=1
Length = 246
Score = 430 bits (1105), Expect = e-120, Method: Compositional matrix adjust.
Identities = 207/246 (84%), Positives = 225/246 (91%), Gaps = 5/246 (2%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 55
MSRG+G GYDRHITIFSPEGRL+QV AVK+AGVTSIGVRGKDSVCVVTQKKVPDKL
Sbjct: 1 MSRGTGAGYDRHITIFSPEGRLYQVEYAFKAVKSAGVTSIGVRGKDSVCVVTQKKVPDKL 60
Query: 56 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 115
LDHTSVTHLFPITKY+GLLATG+TADAR+LV QAR EAAEFRFK+GYEMPVDVLAKWIAD
Sbjct: 61 LDHTSVTHLFPITKYIGLLATGLTADARSLVYQARNEAAEFRFKWGYEMPVDVLAKWIAD 120
Query: 116 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 175
K+QVYTQHAYMRPLGVVAMVL DEE +LFKCDPAGHFFGHKATSAGLKEQEAINFLE
Sbjct: 121 KAQVYTQHAYMRPLGVVAMVLGYDEEKNAQLFKCDPAGHFFGHKATSAGLKEQEAINFLE 180
Query: 176 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
KKMK+DP F+++ETVQ AIS LQSVLQEDFKA+EIEVGVV K++ FR L+ EEID+HLT
Sbjct: 181 KKMKDDPQFSYEETVQIAISALQSVLQEDFKATEIEVGVVRKDDRVFRALTTEEIDQHLT 240
Query: 236 AISERD 241
AISERD
Sbjct: 241 AISERD 246
>sp|P60901|PSA6_RAT Proteasome subunit alpha type-6 OS=Rattus norvegicus GN=Psma6 PE=1
SV=1
Length = 246
Score = 322 bits (826), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/246 (61%), Positives = 198/246 (80%), Gaps = 5/246 (2%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 55
MSRGS G+DRHITIFSPEGRL+QV A+ G+TS+ VRGKD +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 56 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 115
LD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 116 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 175
SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 176 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
KK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 236 AISERD 241
A++ERD
Sbjct: 241 ALAERD 246
>sp|P60900|PSA6_HUMAN Proteasome subunit alpha type-6 OS=Homo sapiens GN=PSMA6 PE=1 SV=1
Length = 246
Score = 322 bits (826), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/246 (61%), Positives = 198/246 (80%), Gaps = 5/246 (2%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 55
MSRGS G+DRHITIFSPEGRL+QV A+ G+TS+ VRGKD +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 56 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 115
LD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 116 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 175
SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 176 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
KK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 236 AISERD 241
A++ERD
Sbjct: 241 ALAERD 246
>sp|Q2YDE4|PSA6_BOVIN Proteasome subunit alpha type-6 OS=Bos taurus GN=PSMA6 PE=1 SV=1
Length = 246
Score = 322 bits (826), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/246 (61%), Positives = 198/246 (80%), Gaps = 5/246 (2%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 55
MSRGS G+DRHITIFSPEGRL+QV A+ G+TS+ VRGKD +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 56 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 115
LD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD
Sbjct: 61 LDSSTVTHLFKITENIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 116 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 175
SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 176 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
KK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 236 AISERD 241
A++ERD
Sbjct: 241 ALAERD 246
>sp|Q9QUM9|PSA6_MOUSE Proteasome subunit alpha type-6 OS=Mus musculus GN=Psma6 PE=1 SV=1
Length = 246
Score = 322 bits (826), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 152/246 (61%), Positives = 198/246 (80%), Gaps = 5/246 (2%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 55
MSRGS G+DRHITIFSPEGRL+QV A+ G+TS+ VRGKD +VTQKKVPDKL
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAINQGGLTSVAVRGKDCAVIVTQKKVPDKL 60
Query: 56 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 115
LD ++VTHLF IT+ +G + TGMTAD+R+ VQ+ARYEAA +++KYGYE+PVD+L K IAD
Sbjct: 61 LDSSTVTHLFKITESIGCVMTGMTADSRSQVQRARYEAANWKYKYGYEIPVDMLCKRIAD 120
Query: 116 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 175
SQVYTQ+A MRPLG +++ IDEE GP+++KCDPAG++ G KAT+AG+K+ E+ +FLE
Sbjct: 121 ISQVYTQNAEMRPLGCCMILIGIDEEQGPQVYKCDPAGYYCGFKATAAGVKQTESTSFLE 180
Query: 176 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
KK+K +TF++TV+TAI+ L +VL DFK SEIEVGVV+ ENP+FR+L+ EID HL
Sbjct: 181 KKVKKKFDWTFEQTVETAITCLSTVLSIDFKPSEIEVGVVTVENPKFRILTEAEIDAHLV 240
Query: 236 AISERD 241
A++ERD
Sbjct: 241 ALAERD 246
>sp|O94517|PSA1_SCHPO Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC646.16 PE=3 SV=1
Length = 244
Score = 271 bits (693), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 134/241 (55%), Positives = 177/241 (73%), Gaps = 9/241 (3%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
G+DR IT+FSPEGRL+QV A AG+TS+GV GK+ CV++QKKVPDKL+D ++V
Sbjct: 6 GFDRTITVFSPEGRLYQVEYAFKAFNNAGITSVGVTGKNCACVISQKKVPDKLIDASTVK 65
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
H+FPITK +G + TG ADAR V +AR EAAEF +K GY MP DVLAK +A+ +QV TQ
Sbjct: 66 HVFPITKGIGCVMTGSIADARAQVSRARSEAAEFEYKNGYPMPCDVLAKRMANIAQVSTQ 125
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND- 181
A MRPLGV ++++D+E GP LFK DPAG + G+KATSAG K+ E IN+LEK+ K D
Sbjct: 126 RAAMRPLGVAMTLVAVDDEIGPSLFKLDPAGFYIGYKATSAGPKQTETINWLEKRFKKDG 185
Query: 182 -PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 240
P+ +TV+T I L S L DFK++E+++GVV + P FRVLS+EEI+ HL +I+E+
Sbjct: 186 IPS-NLTDTVETGIQALMSSLSTDFKSTELQIGVVEDDKP-FRVLSVEEIEAHLQSIAEK 243
Query: 241 D 241
D
Sbjct: 244 D 244
>sp|Q9XZJ4|PSA6_DROME Proteasome subunit alpha type-6 OS=Drosophila melanogaster
GN=Prosalpha1 PE=2 SV=2
Length = 244
Score = 268 bits (684), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 135/246 (54%), Positives = 174/246 (70%), Gaps = 7/246 (2%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 55
MSRGS G+DRHITIFSPEGRL+QV A+ +T++ ++ D V TQKKV +K
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKN 60
Query: 56 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 115
+ +VTHLF ITK +G TG AD+R+ VQ+ARYEAA FR+KYGYEMPVDVL + IAD
Sbjct: 61 IVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIAD 120
Query: 116 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 175
+QVYTQ+A MRPLG ++++ D E GP ++K DPAG+F G KA S G K EA ++LE
Sbjct: 121 INQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLE 180
Query: 176 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
KK K P + ++ +Q AIS L SVL DFK + IE+GVVSK +P FR+L EI+EHLT
Sbjct: 181 KKYK--PNLSEEKAIQLAISCLSSVLAIDFKPNGIEIGVVSKSDPTFRILDEREIEEHLT 238
Query: 236 AISERD 241
I+E+D
Sbjct: 239 KIAEKD 244
>sp|Q54XM7|PSA6_DICDI Proteasome subunit alpha type-6 OS=Dictyostelium discoideum
GN=psmA6 PE=3 SV=1
Length = 250
Score = 260 bits (664), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/251 (50%), Positives = 179/251 (71%), Gaps = 11/251 (4%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 55
MSR GYD I IFSP+G+L+Q+ A+K G+TS+G+RGKD V V TQKK+PDKL
Sbjct: 1 MSRSGTAGYDMSI-IFSPQGKLYQIEYAFKAIKTGGLTSVGIRGKDCVVVATQKKIPDKL 59
Query: 56 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 115
+D SVT L+ +T Y+G + TG+ D+++ +A E A F K+GY++P +VLAK +AD
Sbjct: 60 IDPKSVTSLYKLTDYIGCVQTGIVPDSKSQASRAIQECATFHHKFGYQIPPNVLAKRMAD 119
Query: 116 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 175
+Q+ TQHA RPLGV +++ ID+E GP+LFK DPAG F G+KAT+AG KEQE+ NFLE
Sbjct: 120 IAQLSTQHASARPLGVAMILIGIDDELGPQLFKVDPAGVFTGYKATAAGEKEQESTNFLE 179
Query: 176 KKMKNDPAFTFQETVQT-----AISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEI 230
KK K++P + ET+Q AISTLQSVL D K+S++E+G+ + +N +F +++ E+I
Sbjct: 180 KKFKSNPQLSKDETIQVSLIVMAISTLQSVLGADLKSSDLEIGICTMDNRKFVIMTDEDI 239
Query: 231 DEHLTAISERD 241
D LT ++ERD
Sbjct: 240 DSQLTKLAERD 250
>sp|P21243|PSA1_YEAST Proteasome subunit alpha type-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SCL1 PE=1 SV=1
Length = 252
Score = 227 bits (579), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 121/243 (49%), Positives = 169/243 (69%), Gaps = 12/243 (4%)
Query: 9 YDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH 63
YDRHITIFSPEGRL+QV A + S+ VRGKD V++QKKVPDKLLD T+V++
Sbjct: 12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSY 71
Query: 64 LFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQH 123
+F I++ +G++ G DAR +A+ EAAEFR+KYGY+MP DVLAK +A+ SQ+YTQ
Sbjct: 72 IFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQR 131
Query: 124 AYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE---KKMKN 180
AYMRPLGV+ +S+DEE GP ++K DPAG++ G+KAT+ G K+QE LE KK K
Sbjct: 132 AYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKI 191
Query: 181 DPAF--TFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAIS 238
D ++++ V+ AI+ + L +F +++EVGV +K+ +F LS E I+E L AI+
Sbjct: 192 DHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKD--KFFTLSAENIEERLVAIA 249
Query: 239 ERD 241
E+D
Sbjct: 250 EQD 252
>sp|O17586|PSA6_CAEEL Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1
PE=1 SV=1
Length = 246
Score = 223 bits (568), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 105/246 (42%), Positives = 166/246 (67%), Gaps = 5/246 (2%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 55
MSRGS G+DRHITIFSPEGR++QV A+ + +T++ V+G D+ + QK+VPD L
Sbjct: 1 MSRGSSAGFDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSL 60
Query: 56 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 115
+ +VT ++ I++ +G A GM DA+ +++A+ EAA +++K GY+MP ++LAK +AD
Sbjct: 61 IVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMAD 120
Query: 116 KSQVYTQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLE 175
+Q YTQ+A MR LG + +S D+E GP +++ DPAG++ G K S G+K+ A +FLE
Sbjct: 121 LNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLE 180
Query: 176 KKMKNDPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
KK+K T E ++ AI LQ+ L D ++ ++EV VV+K+N +F L+ ++++ HL
Sbjct: 181 KKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVEHHLN 240
Query: 236 AISERD 241
I+ RD
Sbjct: 241 QIANRD 246
>sp|Q9GU37|PSA1_TRYBB Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2
SV=1
Length = 266
Score = 169 bits (428), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/251 (40%), Positives = 150/251 (59%), Gaps = 16/251 (6%)
Query: 1 MSRGSGGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKL 55
MSR G+D++IT+FSPEG L+QV AV AG+ ++ +R KD+V V TQ VPDKL
Sbjct: 1 MSRA---GFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKL 57
Query: 56 LDHTSVTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIAD 115
+ ++T L+ + G+ TG D + LVQ+AR EA+E++++YG M V VLAK D
Sbjct: 58 MRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQD 117
Query: 116 KSQVYTQHAYMRPLGVVAMVLSI--DEECG---PRLFKCDPAGHFFGHKATSAGLKEQEA 170
+QV TQ A MR +G + + + ++E G P+++ DPAG H A + G K+ EA
Sbjct: 118 MAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGGAAVH-ACAVGKKQIEA 176
Query: 171 INFLEKKMKNDPAFTF--QETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIE 228
FLEKK KN P T +E A++ LQS L E +AS +EVG + ++ F +S
Sbjct: 177 CAFLEKKQKNAPFHTLSQKEAAMIALAALQSALGESLRASGVEVGRCTADDHHFLRVSDR 236
Query: 229 EIDEHLTAISE 239
E+ + LT +++
Sbjct: 237 EVKKWLTPLAK 247
>sp|Q8TYB7|PSA_METKA Proteasome subunit alpha OS=Methanopyrus kandleri (strain AV19 /
DSM 6324 / JCM 9639 / NBRC 100938) GN=psmA PE=3 SV=1
Length = 246
Score = 167 bits (423), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 95/240 (39%), Positives = 143/240 (59%), Gaps = 13/240 (5%)
Query: 9 YDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH 63
YDR IT+FSP+GRLFQV AVK G T++G++ ++ V + K+V KL++ S+
Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKR-GTTALGIKVEEGVVLGVDKRVTSKLIEPESIEK 68
Query: 64 LFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQH 123
++ I ++G G+ ADAR LV++AR EA +R+ YG + VDVL K I D QVYTQH
Sbjct: 69 VYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQH 128
Query: 124 AYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 183
+RP G ++ +D + G RLF+ DP+G HKAT+ G QEA++ E++ + D
Sbjct: 129 GGVRPFGTALLIAGVDTK-GCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYRED-- 185
Query: 184 FTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI--SERD 241
T QE ++ A+ L +E+ A +E+ VV K+ FR L ++I+E + SE D
Sbjct: 186 MTLQEAIELAVRALYEASREETTADNLEIAVVDKQG--FRKLERKKIEEMFERVVGSEED 243
>sp|Q8TPX5|PSA_METAC Proteasome subunit alpha OS=Methanosarcina acetivorans (strain ATCC
35395 / DSM 2834 / JCM 12185 / C2A) GN=psmA PE=3 SV=1
Length = 247
Score = 158 bits (400), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 134/238 (56%), Gaps = 9/238 (3%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR IT+FSP+GRLFQV AVK G T++G++ D V ++ K++ +L++ S+
Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIE 64
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I +++G +G+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ
Sbjct: 65 KIFQIDEHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQ 124
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + D
Sbjct: 125 YGGVRPYGTALLIAGVDDNK-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED- 182
Query: 183 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 240
+ + L + F A +EVGVVS E+ +FR L EE++ ++ I E+
Sbjct: 183 -MNMDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVQQILEK 239
>sp|Q469M6|PSA_METBF Proteasome subunit alpha OS=Methanosarcina barkeri (strain Fusaro /
DSM 804) GN=psmA PE=3 SV=1
Length = 249
Score = 158 bits (399), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 84/238 (35%), Positives = 135/238 (56%), Gaps = 9/238 (3%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR IT+FSP+GRLFQV AVK G T++G++ D V ++ K++ +L++ S+
Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIE 66
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++G +G+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ
Sbjct: 67 KIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDEPIGVEVISKKICDHKQTYTQ 126
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + + D
Sbjct: 127 YGGVRPYGTALLIAGVDDNL-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEAEYRQD- 184
Query: 183 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 240
+ + L + F AS +EVG+VS ++ +FR L EE++ ++ I E+
Sbjct: 185 -MNMDAAILLGMDALYRAAEGKFDASTLEVGIVSLQDKKFRKLVPEEVENYVQQILEK 241
>sp|Q8PTU1|PSA_METMA Proteasome subunit alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=psmA PE=3 SV=1
Length = 249
Score = 156 bits (395), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 133/238 (55%), Gaps = 9/238 (3%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR IT+FSP+GRLFQV AVK G T++G++ D V ++ K++ +L++ S+
Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIE 66
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++G +G+ ADAR+LV +AR EA R Y + V+V++K I D Q YTQ
Sbjct: 67 KIFQIDDHIGAATSGLVADARSLVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQ 126
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
+ +RP G ++ +D+ PRLF+ DP+G +KAT+ G + E + D
Sbjct: 127 YGGVRPYGTALLIAGVDDNK-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYRED- 184
Query: 183 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 240
+ + L + F A +EVGVVS E+ +FR L EE++ ++ I E+
Sbjct: 185 -MNIDAAILLGMDALYKAAEGKFDAGTLEVGVVSLEDKKFRKLGPEEVENYVHQILEK 241
>sp|Q59565|PSA_METTE Proteasome subunit alpha OS=Methanosarcina thermophila GN=psmA PE=3
SV=1
Length = 247
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 133/238 (55%), Gaps = 9/238 (3%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR IT+FSP+GRLFQV AVK G T++G++ D V ++ K++ +L++ S+
Sbjct: 6 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTAVGIKAADGVVLLVDKRITSRLVEAESIE 64
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++G +G+ ADAR LV +AR EA R Y + V+V++K I D Q YTQ
Sbjct: 65 KIFQIDDHIGAATSGLVADARALVDRARVEAQVNRVSYDELIGVEVISKKICDHKQTYTQ 124
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
+ +RP G ++ +D++ PRLF+ DP+G +KAT+ G + E K D
Sbjct: 125 YGGVRPYGTALLIAGVDDKR-PRLFETDPSGALLEYKATAIGAGRNAVVEVFEADYKED- 182
Query: 183 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 240
+ + + L + F A +EVGVVS ++ +FR L EE+ ++ I E+
Sbjct: 183 -MNIEAAILLGMDALYKAAEGKFDAGTLEVGVVSLQDKKFRKLEPEEVGNYVQQILEK 239
>sp|C6A459|PSA_THESM Proteasome subunit alpha OS=Thermococcus sibiricus (strain MM 739 /
DSM 12597) GN=psmA PE=3 SV=1
Length = 260
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 140/233 (60%), Gaps = 11/233 (4%)
Query: 7 GGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 61
GYDR IT+FSP+GRLFQV AVK G T++GV+ KD V + +K+V KL++ S
Sbjct: 8 AGYDRAITVFSPDGRLFQVQYAREAVKR-GATAVGVKCKDGVVLAVEKRVTSKLIEPESY 66
Query: 62 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 121
+F I ++ ++G+ ADAR LV +AR EA +R YG +P+ VL K I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQMHT 126
Query: 122 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 181
Q+ +RP G ++ ++E+ P LF+ DP+G +F KA + G A+ E+K +++
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEKYRDE 184
Query: 182 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 234
T +E ++ A+ L +++E S IEV V+S + +F+ ++ EE+ + L
Sbjct: 185 --MTLEEAIKLAVLALSKIMEEPSPES-IEVAVISVKEKKFKKITPEEVAKCL 234
>sp|Q60177|PSA_METJA Proteasome subunit alpha OS=Methanocaldococcus jannaschii (strain
ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
GN=psmA PE=1 SV=1
Length = 261
Score = 155 bits (393), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/227 (37%), Positives = 133/227 (58%), Gaps = 10/227 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
YDR IT+FSPEGRL+QV AV+ G T+IG+ KD V + +++ KL+ S+
Sbjct: 8 AYDRAITVFSPEGRLYQVEYAREAVRR-GTTAIGIACKDGVVLAVDRRITSKLVKIRSIE 66
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++ +G+ ADAR L+ +AR EA +R YG E+ +++LAK I D Q YTQ
Sbjct: 67 KIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQ 126
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H +RP GV ++ ID+ RLF+ DP+G +KAT+ G + LEK+ ++D
Sbjct: 127 HGGVRPFGVSLLIAGIDKN-EARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDD- 184
Query: 183 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEE 229
T E ++ AI+ L ED K ++V +++ ++ +F+ + +EE
Sbjct: 185 -ITLDEGLELAITALTKA-NEDIKPENVDVCIITVKDAQFKKIPVEE 229
>sp|Q9V122|PSA_PYRAB Proteasome subunit alpha OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=psmA PE=3 SV=1
Length = 260
Score = 154 bits (389), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 137/233 (58%), Gaps = 11/233 (4%)
Query: 7 GGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 61
GYDR IT+FSP+GRLFQV AVK G T++GV+ KD V + +K++ +L++ S
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKCKDGVVLAVEKRITSRLIEPESY 66
Query: 62 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 121
+F I ++ ++G+ ADAR LV +AR EA R YG P+ V+ K I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHT 126
Query: 122 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 181
Q+ +RP G ++ ++++ P L++ DP+G +F KA + G A+ E K ++D
Sbjct: 127 QYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRDD 184
Query: 182 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 234
T E ++ AI L +++ A IEV V++ ++ +FR LS EEI++ L
Sbjct: 185 --MTLDEAIKLAIFALAKTMEKP-SAENIEVAVITVKDKKFRKLSKEEIEKFL 234
>sp|O59219|PSA_PYRHO Proteasome subunit alpha OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=psmA PE=3 SV=1
Length = 260
Score = 154 bits (388), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/234 (35%), Positives = 139/234 (59%), Gaps = 11/234 (4%)
Query: 7 GGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 61
GYDR IT+FSP+GRLFQV AVK G T++GV+ + V + +K++ +L++ S
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKCNEGVVLAVEKRITSRLIEPESY 66
Query: 62 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 121
+F I ++ ++G+ ADAR LV +AR EA R YG P+ V+ K I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHT 126
Query: 122 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 181
Q+ +RP G ++ ++E+ P L++ DP+G +F KA + G A+ E+K K+D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKDD 184
Query: 182 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
+ +E ++ AI L +++ A IEV +++ ++ +FR LS EEI+++L
Sbjct: 185 --MSLEEAIKLAIFALAKTMEKP-SAENIEVAIITVKDKKFRKLSREEIEKYLN 235
>sp|Q8U0L6|PSA_PYRFU Proteasome subunit alpha OS=Pyrococcus furiosus (strain ATCC 43587
/ DSM 3638 / JCM 8422 / Vc1) GN=psmA PE=3 SV=1
Length = 260
Score = 152 bits (385), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 139/234 (59%), Gaps = 11/234 (4%)
Query: 7 GGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 61
GYDR IT+FSP+GRLFQV AVK G T++GV+ + V + +K++ +L++ S
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKCGEGVVLAVEKRITSRLIEPDSY 66
Query: 62 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 121
+F I ++ ++G+ ADAR LV +AR EA +R YG PV V+ K I D Q++T
Sbjct: 67 EKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHT 126
Query: 122 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 181
Q+ +RP G ++ I++ P L++ DP+G +F KA + G A+ E+K ++D
Sbjct: 127 QYGGVRPFGAALLMAGINDR--PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRDD 184
Query: 182 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
++ ++ A+ L + E+ A IEV V++ ++ +FR L+ +EI+++L+
Sbjct: 185 --MNLEDAIKLALMALAKTM-ENPSADNIEVAVITVKDKKFRKLTRDEIEKYLS 235
>sp|A4FZT6|PSA_METM5 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C5 /
ATCC BAA-1333) GN=psmA PE=3 SV=1
Length = 259
Score = 151 bits (381), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 10/238 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR ITIFSPEGRL+QV AV+ G T++G++ KD V + +++ KL+D +S+
Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIE 67
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQ
Sbjct: 68 KIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQ 127
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K D
Sbjct: 128 HGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKYSED- 185
Query: 183 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 240
T E ++ A+ L S E+ K I++ +V +S++EI++ + A+ ++
Sbjct: 186 -MTVNEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAVYKK 241
>sp|A6VIP0|PSA_METM7 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C7 /
ATCC BAA-1331) GN=psmA PE=3 SV=1
Length = 259
Score = 150 bits (379), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 10/238 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR ITIFSPEGRL+QV AV+ G T++G++ KD V + +++ KL+D +S+
Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIE 67
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQ
Sbjct: 68 KIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQ 127
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K D
Sbjct: 128 HGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DE 184
Query: 183 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 240
T E ++ A+ L S E+ K I++ +V +S++EI++ + A+ ++
Sbjct: 185 NMTVNEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAVYKK 241
>sp|Q6M0L9|PSA_METMP Proteasome subunit alpha OS=Methanococcus maripaludis (strain S2 /
LL) GN=psmA PE=3 SV=1
Length = 259
Score = 149 bits (375), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 86/235 (36%), Positives = 131/235 (55%), Gaps = 10/235 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR ITIFSPEGRL+QV AV+ G T++G++ KD V + +++ KL+D +S+
Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSSIE 67
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQ
Sbjct: 68 KIFQIDDHIVAATSGLVADARVLIDRARIEAQMNRVSYGEAITVEALAKKICDIKQAYTQ 127
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K D
Sbjct: 128 HGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DE 184
Query: 183 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 237
T E ++ A+ L S E+ K I++ ++ +S++EI++ + A+
Sbjct: 185 NMTVSEGMELALYAL-SKTTEELKPENIDMAIIKDSGKLVEKISVDEIEKIVKAV 238
>sp|O26782|PSA_METTH Proteasome subunit alpha OS=Methanothermobacter thermautotrophicus
(strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330
/ Delta H) GN=psmA PE=3 SV=1
Length = 248
Score = 148 bits (373), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 81/232 (34%), Positives = 131/232 (56%), Gaps = 9/232 (3%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR IT+FSP+GRLFQV AVK G TS+GV+ K+ + +V K+ KL++ S+
Sbjct: 8 GYDRAITVFSPDGRLFQVEYAREAVKR-GTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIE 66
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I +++G +G+ ADAR ++++AR EA R Y + V+ LAK I D Q+YTQ
Sbjct: 67 KIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQ 126
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H +RP G ++ ++ G RLF+ DP+G +KAT+ G A+ EKK +D
Sbjct: 127 HGGVRPFGTALIIGGVNGR-GCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSDD- 184
Query: 183 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 234
+ ++ A+ + + +E+ V+ + ++R L +EI +H+
Sbjct: 185 -MNLNQAIELALDAVYEATEGKTTPESVEIAVIEAADKKYRRLPDDEIRDHV 235
>sp|B8GEZ3|PSA_METPE Proteasome subunit alpha OS=Methanosphaerula palustris (strain ATCC
BAA-1556 / DSM 19958 / E1-9c) GN=psmA PE=3 SV=1
Length = 241
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 135/237 (56%), Gaps = 9/237 (3%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR IT+FSP+GRL+QV AVK G T++G++ D + ++ K+V KLL+ +S+
Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKR-GTTAVGIKCNDGIVLLVDKRVNSKLLEPSSIE 66
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++G+ ++G+ DAR+LV +AR E+ R Y ++ V++L+K + D Q YTQ
Sbjct: 67 KIFKIDNHIGVASSGLVGDARSLVDRARVESQVNRVSYDEQIDVEMLSKKLCDHMQTYTQ 126
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
RP G ++ I + RLF+ DP+G +KAT G+ + E++ +P
Sbjct: 127 FGGARPYGTALLIAGI-SDGQFRLFETDPSGTLLEYKATGIGIGRNAVMKVFEEEY--NP 183
Query: 183 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 239
+ ++ + + L + + F + +E+GVV+ + P FR +S +E+ + I +
Sbjct: 184 EASIRDAILLGLKALHAATEGKFDVNTVEIGVVNNDTPAFRKMSRQEVASFVEQIEQ 240
>sp|O24733|PSA_THEK1 Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA
PE=3 SV=1
Length = 260
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 85/236 (36%), Positives = 135/236 (57%), Gaps = 11/236 (4%)
Query: 7 GGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 61
GYDR IT+FSP+GRLFQV AVK G T++GV+ KD V + +K++ KL++ +S
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKWKDGVVLAVEKRITSKLIEPSSY 66
Query: 62 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 121
+F I ++ +G+ ADAR LV +AR EA +R YG +P+ VL K I D Q +T
Sbjct: 67 EKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 122 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 181
Q+ +RP G ++ ++E+ P LF+ DP+G +F KA + G A+ E+ ++D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD 184
Query: 182 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 237
+ ++ AI L L+E A IEV ++ + ++ L EE++++L I
Sbjct: 185 --IGKDDAIKLAILALAKTLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYLNEI 237
>sp|O29760|PSA_ARCFU Proteasome subunit alpha OS=Archaeoglobus fulgidus (strain ATCC
49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126)
GN=psmA PE=1 SV=1
Length = 246
Score = 147 bits (371), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 136/238 (57%), Gaps = 10/238 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR IT+FSP+GRLFQV AVK G T+IG++ K+ V ++ K+V KLL+ ++
Sbjct: 7 GYDRAITVFSPDGRLFQVEYAREAVKR-GATAIGIKCKEGVILIADKRVGSKLLEADTIE 65
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
++ I +++ +G+ ADAR L+ +AR EA R Y + V LAK I D Q YTQ
Sbjct: 66 KIYKIDEHICAATSGLVADARVLIDRARIEAQINRLTYDEPITVKELAKKICDFKQQYTQ 125
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
+ +RP GV ++ +DE P+L++ DP+G +KAT+ G+ F EK+ ++D
Sbjct: 126 YGGVRPFGVSLLIAGVDEV--PKLYETDPSGALLEYKATAIGMGRNAVTEFFEKEYRDD- 182
Query: 183 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 240
+F + + + + ++ + IEVG V ++ F+ +S EE+ ++ +ER
Sbjct: 183 -LSFDDAMVLGLVAMGLSIESELVPENIEVGYVKVDDRTFKEVSPEELKPYVERANER 239
>sp|Q5JIU9|PSA_PYRKO Proteasome subunit alpha OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=psmA PE=3 SV=1
Length = 260
Score = 147 bits (370), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 135/236 (57%), Gaps = 11/236 (4%)
Query: 7 GGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 61
GYDR IT+FSP+GRLFQV AVK G T++GV+ KD V + +K++ KL++ +S
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKWKDGVVLAVEKRITSKLIEPSSY 66
Query: 62 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 121
+F I ++ +G+ ADAR LV +AR EA +R YG +P+ VL K I D Q +T
Sbjct: 67 EKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 122 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 181
Q+ +RP G ++ ++E+ P LF+ DP+G +F KA + G A+ E+ ++D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRDD 184
Query: 182 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 237
+ ++ AI L L+E A IEV ++ + ++ L EE+++++ I
Sbjct: 185 --IGKDDAIKLAILALAKTLEEP-TAEGIEVAYITMDEKRWKKLPREELEKYINEI 237
>sp|A9A846|PSA_METM6 Proteasome subunit alpha OS=Methanococcus maripaludis (strain C6 /
ATCC BAA-1332) GN=psmA PE=3 SV=1
Length = 259
Score = 146 bits (368), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 85/238 (35%), Positives = 131/238 (55%), Gaps = 10/238 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR ITIFSPEGRL+QV AV+ G T++G++ D V + +++ KL+D +S+
Sbjct: 9 GYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCNDGVVLAVDRRITSKLIDVSSIE 67
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q YTQ
Sbjct: 68 KIFQIDDHIVAATSGLVADARVLIDRARLEAQMNRISYGEAITVEALAKKICDIKQAYTQ 127
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE K D
Sbjct: 128 HGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPIAMEVLESKY--DE 184
Query: 183 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISER 240
E ++ A+ L S E+ K I++ +V +S++EI++ + A+ ++
Sbjct: 185 NMIVSEGMELALYAL-SKTTEELKPENIDMAIVKDSGKLVEKISVDEIEKIVKAVYKK 241
>sp|Q97BZ8|PSA_THEVO Proteasome subunit alpha OS=Thermoplasma volcanium (strain ATCC
51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) GN=psmA
PE=3 SV=2
Length = 233
Score = 146 bits (368), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/234 (38%), Positives = 137/234 (58%), Gaps = 16/234 (6%)
Query: 9 YDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH 63
YDR IT+FSP+GRLFQV AVK G T++G++ + V +++ KK+ KL++ S+
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKK-GSTALGLKFSNGVLLISDKKIRSKLIEQNSLEK 66
Query: 64 LFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQH 123
+ I Y+ + +G+ ADAR L+ AR A + + YG + ++ L K +AD+ Q YTQ+
Sbjct: 67 IQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQY 126
Query: 124 AYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 183
+RP GV + ID + GPRLF CDPAG +KAT+ G + ++FLEK+ K
Sbjct: 127 GGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKE--G 183
Query: 184 FTFQETVQTAISTLQSVLQ--EDFKASEI-EVGVVSKENPEFRVLSIEEIDEHL 234
+ +E V I L++ L+ E+ KA EI + V SK +R+ EE+ + L
Sbjct: 184 LSEKEAVTLGIKALKASLEEGEELKAPEIASITVGSK----YRIYGAEEVKKFL 233
>sp|P25156|PSA_THEAC Proteasome subunit alpha OS=Thermoplasma acidophilum (strain ATCC
25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
GN=psmA PE=1 SV=2
Length = 233
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 88/233 (37%), Positives = 135/233 (57%), Gaps = 14/233 (6%)
Query: 9 YDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH 63
YDR IT+FSP+GRLFQV AVK G T++G++ + V +++ KKV +L++ S+
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKK-GSTALGMKFANGVLLISDKKVRSRLIEQNSIEK 66
Query: 64 LFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQH 123
+ I Y+ + +G+ ADAR LV AR A + + YG + ++ L K +AD+ Q YTQ+
Sbjct: 67 IQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQY 126
Query: 124 AYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 183
+RP GV + ID + GPRLF CDPAG +KAT+ G + ++FLE++ K +
Sbjct: 127 GGVRPYGVSLIFAGID-QIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKEN-- 183
Query: 184 FTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 234
+E V I L+S L+ E+ KA EI V ++R+ EE+ + L
Sbjct: 184 LPEKEAVTLGIKALKSSLEEGEELKAPEIASITVGN---KYRIYDQEEVKKFL 233
>sp|A3CW55|PSA_METMJ Proteasome subunit alpha OS=Methanoculleus marisnigri (strain ATCC
35101 / DSM 1498 / JR1) GN=psmA PE=3 SV=1
Length = 240
Score = 145 bits (365), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/238 (34%), Positives = 130/238 (54%), Gaps = 11/238 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR IT+FSP+GRL+QV AVK G T++G++ + V ++ K+V +LL+ S+
Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKR-GTTAVGIKCSEGVVLIVDKRVTSRLLEPVSIE 66
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++G+ ++G+ DAR+LV +AR E+ R Y + V++LAK + D Q YTQ
Sbjct: 67 KIFKIDAHIGVASSGLVGDARSLVDRARVESQINRVSYNEPINVEILAKKLCDHMQTYTQ 126
Query: 123 HAYMRPLGVVAMVLSI-DEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 181
RP G ++ + D E RLF+ DP+G +KAT G I E + + D
Sbjct: 127 FGGARPYGTALLIAGVSDGEA--RLFETDPSGTLLEYKATGIGTGRPAVIKTFEDEYQED 184
Query: 182 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAISE 239
F+ ++ I L + + S IE+GVVS E EFR + +E+ ++ E
Sbjct: 185 ADFS--GAIRLGIKALHAATEGKLDVSAIEIGVVSIETGEFRKMEKDEVKAYVDQFEE 240
>sp|Q6L0W3|PSA_PICTO Proteasome subunit alpha OS=Picrophilus torridus (strain ATCC
700027 / DSM 9790 / JCM 10055 / NBRC 100828) GN=psmA
PE=3 SV=1
Length = 234
Score = 144 bits (363), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 133/232 (57%), Gaps = 10/232 (4%)
Query: 9 YDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVTH 63
YDR IT+FSP+GRLFQV AVK G T++G++ KD V ++++KKV +L++ TS+
Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKK-GSTALGIKFKDGVALISEKKVRSRLVEKTSLEK 66
Query: 64 LFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQH 123
+ I + + +G+ ADAR L+ AR + + YG M ++ L K +AD+ Q YTQ+
Sbjct: 67 IQLIDDRVAAVTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQY 126
Query: 124 AYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDPA 183
+RP GV + +D GPRLF CDPAG +K S G + + +LEK+ K +
Sbjct: 127 GGVRPYGVSIIFAGLD-SIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKEN-- 183
Query: 184 FTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
+ E ++ I+ L+S + ++ E E+ + K F V + EE+ ++L
Sbjct: 184 LSEDEAIRMGIAALKSAVADESSMKEPEIASI-KMGETFHVFTSEEVSKYLN 234
>sp|A4YCU9|PSA_METS5 Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC
51363 / DSM 5348) GN=psmA PE=3 SV=1
Length = 240
Score = 143 bits (361), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 135/237 (56%), Gaps = 12/237 (5%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR ITIFSP+G L+QV AVK G T++GV+ K++V ++ +KK +LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTTLGVKTKNAVVILGEKKKASQLLDVDSIE 67
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F + ++G G+ +D R L+ AR + + R Y + +D L K I+D Q+YTQ
Sbjct: 68 KVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQ 127
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H +RP GV +V +D +LF +P+G F ++A + G A ++LEK K D
Sbjct: 128 HGGVRPFGVALIVGGVDRGV-TKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYKED- 185
Query: 183 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHLTAI 237
+ +ET+ A++ L+ L+ E +E+G +KE +FR +++EE +L I
Sbjct: 186 -LSVEETILLALNALKVTLKPGEKLGPGNVEIGFATKEG-QFRKMTLEERANYLQKI 240
>sp|A7I9C7|PSA_METB6 Proteasome subunit alpha OS=Methanoregula boonei (strain 6A8)
GN=psmA PE=3 SV=1
Length = 240
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 129/232 (55%), Gaps = 9/232 (3%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR IT+FSP+GRL+QV AVK G T++G++ D V ++ K+V KLL+ +S+
Sbjct: 8 GYDRAITVFSPDGRLYQVEYAREAVKR-GTTAVGIKAHDGVVLIVDKRVSSKLLESSSIE 66
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I +++G+ ++G+ DAR LV +AR E R Y + V+ LAK + D Q TQ
Sbjct: 67 KIFKIDEHIGVASSGLVGDARALVDRARIECQINRVSYDERIEVEALAKKLCDHMQTLTQ 126
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
+ +RP G ++ + + RLF+ DP+G +KAT G+ A+ E++ D
Sbjct: 127 YGGIRPYGTALLIAGVS-DGESRLFETDPSGTLLEYKATGIGIGRPAAMKVFEEEYTADL 185
Query: 183 AFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 234
A ++ + + L S + F +E+G+V +F+ ++ EE+ ++
Sbjct: 186 A--LKDAILLGLKALHSATEGKFDVDTVEMGIVESSTAQFKKMTKEEVASYV 235
>sp|A6URN9|PSA_METVS Proteasome subunit alpha OS=Methanococcus vannielii (strain SB /
ATCC 35089 / DSM 1224) GN=psmA PE=3 SV=1
Length = 259
Score = 143 bits (360), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 84/232 (36%), Positives = 127/232 (54%), Gaps = 10/232 (4%)
Query: 6 GGGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTS 60
GYDR ITIFSPEGRL+QV AV+ G T++G++ KD V + +++ KL+D +S
Sbjct: 7 ASGYDRAITIFSPEGRLYQVEYAREAVRR-GTTAVGIKCKDGVVLAVDRRITSKLIDVSS 65
Query: 61 VTHLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVY 120
+ +F I ++ +G+ ADAR L+ +AR EA R YG + V+ LAK I D Q Y
Sbjct: 66 IEKIFQIDDHIVAATSGLVADARVLIDRARVEAQVNRISYGEAITVEALAKKICDIKQAY 125
Query: 121 TQHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKN 180
T H RP G+ ++ ID RLF+ DP+G +KAT+ G A+ LE+K
Sbjct: 126 THHGGARPFGLALLITGIDRHSA-RLFETDPSGALIEYKATAIGSGRPVAMEILEEKY-- 182
Query: 181 DPAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDE 232
D + E ++ AI L S E+ K I++ +V +++ EI++
Sbjct: 183 DENMSVSEGMELAIYAL-SKTTEELKPENIDMAIVKDTGKLVEKITVFEIEK 233
>sp|Q9UXC6|PSA_SULSO Proteasome subunit alpha OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=psmA PE=3 SV=1
Length = 241
Score = 141 bits (356), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 129/234 (55%), Gaps = 11/234 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR ITIFSP+G L+QV AVK G T+IG++ K SV + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSSVVIASEKRKAQSLLDVDSIE 67
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQ
Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQ 127
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H +RP GV ++ ID+ P+LF +P+G + ++A + G A FLEK K D
Sbjct: 128 HGGVRPFGVALVIAGIDKSV-PKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED- 185
Query: 183 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 234
+ET+ A+ L + L+ E + +E+G S + F ++ E+ + +L
Sbjct: 186 -LNVEETILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTNEDKNMYL 238
>sp|C5A2C2|PSA_THEGJ Proteasome subunit alpha OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=psmA PE=3 SV=1
Length = 260
Score = 140 bits (354), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 11/234 (4%)
Query: 7 GGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 61
GYDR IT+FSP+GRLFQV AVK G T++GV+ K V + +K++ +L++ +S
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKWKGGVVLAVEKRITSRLIEPSSY 66
Query: 62 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 121
+F I ++ +G+ ADAR LV +AR EA +R YG +P+ VL K I D Q +T
Sbjct: 67 EKIFQIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 122 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 181
Q+ +RP G ++ ++E+ P L++ DP+G +F KA + G A+ E+ +D
Sbjct: 127 QYGGVRPFGAALLMAGVNEK--PELYETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYSDD 184
Query: 182 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHLT 235
+ ++ AI L L+E S IEV ++ + ++ L EE+ ++L
Sbjct: 185 --IDMEGAIKLAILALAKTLEEPSPES-IEVAYITLDEKRWKKLDKEEVAKYLN 235
>sp|Q975G5|PSA_SULTO Proteasome subunit alpha OS=Sulfolobus tokodaii (strain DSM 16993 /
JCM 10545 / NBRC 100140 / 7) GN=psmA PE=3 SV=2
Length = 242
Score = 140 bits (353), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 123/229 (53%), Gaps = 10/229 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR ITIFSP+G L+QV AVK G T++GV+ K V ++ +K+ +LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTTLGVKTKAGVVLIGEKRKATQLLDVDSIE 67
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F + ++G G+ +D R L+ AR +A + R Y + +D L K ++D Q+YTQ
Sbjct: 68 KVFILDDHVGCSFAGLASDGRILIDYARSQALQHRLIYDEPINIDYLTKLVSDVKQMYTQ 127
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H +RP GV ++ ID P+L +P+G F + A + G A + EK + D
Sbjct: 128 HGGVRPFGVALIIGGIDRGKTPKLLMTEPSGQFMPYYAVAIGQGGYTATEYFEKNYRED- 186
Query: 183 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEE 229
Q+T+ I L S L+ E S IEVG ++ FR +S EE
Sbjct: 187 -LNMQDTILLGIRALASTLKPGEKLAPSNIEVGFADVDSGMFRKMSFEE 234
>sp|B6YSH9|PSA_THEON Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1)
GN=psmA PE=3 SV=1
Length = 260
Score = 140 bits (353), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 132/233 (56%), Gaps = 11/233 (4%)
Query: 7 GGYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSV 61
GYDR IT+FSP+GRLFQV AVK G T++GV+ K+ V + +K++ KL++ +S
Sbjct: 8 AGYDRAITVFSPDGRLFQVNYAREAVKR-GATAVGVKWKEGVVLAVEKRITSKLIEPSSY 66
Query: 62 THLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYT 121
+F I ++ +G+ ADAR LV +AR EA +R YG +P+ VL K I D Q +T
Sbjct: 67 EKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHT 126
Query: 122 QHAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKND 181
Q+ +RP G ++ ++++ P L++ DP+G +F +A + G A+ E +D
Sbjct: 127 QYGGVRPFGAALLMAGVNDK--PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSDD 184
Query: 182 PAFTFQETVQTAISTLQSVLQEDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 234
+ ++ AI L L+E S IEV ++ ++ ++ + EE+ ++L
Sbjct: 185 --LDMEGAIKLAILALAKTLEEPSPES-IEVAYITMKDKRWKKMDKEEVAKYL 234
>sp|C3NEC6|PSA_SULIY Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.G.57.14
/ Yellowstone #1) GN=psmA PE=3 SV=1
Length = 241
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 129/234 (55%), Gaps = 11/234 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR ITIFSP+G L+QV AVK G T+IG++ K V + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIE 67
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQ
Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQ 127
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D
Sbjct: 128 HGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED- 185
Query: 183 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 234
T ++T+ A+ L + L+ E + +E+G S + F ++ E+ + +L
Sbjct: 186 -LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238
>sp|C3NHC6|PSA_SULIN Proteasome subunit alpha OS=Sulfolobus islandicus (strain Y.N.15.51
/ Yellowstone #2) GN=psmA PE=3 SV=1
Length = 241
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 129/234 (55%), Gaps = 11/234 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR ITIFSP+G L+QV AVK G T+IG++ K V + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIE 67
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQ
Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQ 127
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D
Sbjct: 128 HGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED- 185
Query: 183 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 234
T ++T+ A+ L + L+ E + +E+G S + F ++ E+ + +L
Sbjct: 186 -LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238
>sp|C3MVG1|PSA_SULIM Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.14.25 /
Kamchatka #1) GN=psmA PE=3 SV=1
Length = 241
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 129/234 (55%), Gaps = 11/234 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR ITIFSP+G L+QV AVK G T+IG++ K V + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIE 67
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQ
Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQ 127
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D
Sbjct: 128 HGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED- 185
Query: 183 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 234
T ++T+ A+ L + L+ E + +E+G S + F ++ E+ + +L
Sbjct: 186 -LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238
>sp|C3MQ43|PSA_SULIL Proteasome subunit alpha OS=Sulfolobus islandicus (strain L.S.2.15
/ Lassen #1) GN=psmA PE=3 SV=1
Length = 241
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 129/234 (55%), Gaps = 11/234 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR ITIFSP+G L+QV AVK G T+IG++ K V + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIE 67
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQ
Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQ 127
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D
Sbjct: 128 HGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED- 185
Query: 183 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 234
T ++T+ A+ L + L+ E + +E+G S + F ++ E+ + +L
Sbjct: 186 -LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238
>sp|C4KHD9|PSA_SULIK Proteasome subunit alpha OS=Sulfolobus islandicus (strain M.16.4 /
Kamchatka #3) GN=psmA PE=3 SV=1
Length = 241
Score = 139 bits (351), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/234 (34%), Positives = 129/234 (55%), Gaps = 11/234 (4%)
Query: 8 GYDRHITIFSPEGRLFQV-----AVKAAGVTSIGVRGKDSVCVVTQKKVPDKLLDHTSVT 62
GYDR ITIFSP+G L+QV AVK G T+IG++ K V + ++K+ LLD S+
Sbjct: 9 GYDRAITIFSPDGSLYQVDYAFEAVKK-GWTAIGIKSKSGVVIASEKRKAQSLLDVDSIE 67
Query: 63 HLFPITKYLGLLATGMTADARTLVQQARYEAAEFRFKYGYEMPVDVLAKWIADKSQVYTQ 122
+F I ++G G+ +D R L+ AR A + R Y + +D L K +AD Q+YTQ
Sbjct: 68 KVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQ 127
Query: 123 HAYMRPLGVVAMVLSIDEECGPRLFKCDPAGHFFGHKATSAGLKEQEAINFLEKKMKNDP 182
H +RP GV ++ ID+ P+L+ +P+G + ++A + G A FLEK K D
Sbjct: 128 HGGVRPFGVALVIAGIDKSV-PKLYMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYKED- 185
Query: 183 AFTFQETVQTAISTLQSVLQ--EDFKASEIEVGVVSKENPEFRVLSIEEIDEHL 234
T ++T+ A+ L + L+ E + +E+G S + F ++ E+ + +L
Sbjct: 186 -LTIEDTILLALKALSATLKPNEKLTPNTVEIGYASTQTGLFLKMTSEDKNMYL 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,905,774
Number of Sequences: 539616
Number of extensions: 3300916
Number of successful extensions: 9213
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 8638
Number of HSP's gapped (non-prelim): 264
length of query: 241
length of database: 191,569,459
effective HSP length: 114
effective length of query: 127
effective length of database: 130,053,235
effective search space: 16516760845
effective search space used: 16516760845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)