Query 026228
Match_columns 241
No_of_seqs 107 out of 1170
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 05:19:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026228.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026228hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4178 Soluble epoxide hydrol 100.0 9.2E-31 2E-35 208.9 17.4 228 1-240 64-320 (322)
2 PLN03084 alpha/beta hydrolase 100.0 3.3E-28 7.2E-33 204.9 21.1 231 2-239 148-383 (383)
3 PLN02965 Probable pheophorbida 100.0 7.6E-29 1.6E-33 199.5 15.2 219 2-239 24-252 (255)
4 PRK03592 haloalkane dehalogena 100.0 4.7E-28 1E-32 198.8 16.7 227 2-240 48-289 (295)
5 PRK03204 haloalkane dehalogena 100.0 2E-27 4.3E-32 194.3 19.7 224 3-238 56-286 (286)
6 PLN02824 hydrolase, alpha/beta 100.0 1.4E-27 2.9E-32 196.0 18.7 226 2-240 50-294 (294)
7 PRK00870 haloalkane dehalogena 100.0 1.1E-27 2.3E-32 197.4 17.7 227 2-241 67-302 (302)
8 TIGR02240 PHA_depoly_arom poly 100.0 3.1E-27 6.7E-32 192.2 17.7 216 3-240 47-266 (276)
9 PLN02679 hydrolase, alpha/beta 100.0 1.2E-26 2.6E-31 195.4 20.4 223 2-240 109-357 (360)
10 TIGR03343 biphenyl_bphD 2-hydr 99.9 2.2E-26 4.7E-31 187.5 16.2 217 4-239 56-282 (282)
11 PRK07581 hypothetical protein; 99.9 5.9E-26 1.3E-30 189.9 18.5 226 3-240 66-336 (339)
12 PRK06489 hypothetical protein; 99.9 1.7E-25 3.7E-30 188.6 19.2 225 6-240 103-357 (360)
13 PRK10349 carboxylesterase BioH 99.9 4.5E-25 9.7E-30 177.5 18.3 213 3-239 35-255 (256)
14 PLN03087 BODYGUARD 1 domain co 99.9 4.6E-25 1E-29 189.6 19.4 219 7-239 231-478 (481)
15 PRK08775 homoserine O-acetyltr 99.9 3E-25 6.5E-30 185.9 16.8 222 3-239 94-338 (343)
16 PLN02578 hydrolase 99.9 6.6E-25 1.4E-29 184.6 18.0 220 2-239 107-354 (354)
17 PRK10673 acyl-CoA esterase; Pr 99.9 1.2E-24 2.6E-29 174.6 17.6 216 3-240 38-255 (255)
18 PLN02385 hydrolase; alpha/beta 99.9 8.4E-25 1.8E-29 183.6 15.3 218 3-240 110-345 (349)
19 PRK11126 2-succinyl-6-hydroxy- 99.9 1.3E-23 2.7E-28 167.5 17.9 208 8-239 27-241 (242)
20 KOG4409 Predicted hydrolase/ac 99.9 1.2E-23 2.5E-28 168.9 17.3 228 1-241 110-365 (365)
21 TIGR01392 homoserO_Ac_trn homo 99.9 2.1E-23 4.6E-28 175.3 18.8 226 4-238 68-351 (351)
22 TIGR03056 bchO_mg_che_rel puta 99.9 2.7E-23 6E-28 168.5 18.8 221 2-238 49-278 (278)
23 TIGR03611 RutD pyrimidine util 99.9 4.1E-23 8.9E-28 165.0 17.9 217 4-239 36-257 (257)
24 PRK00175 metX homoserine O-ace 99.9 3.1E-23 6.7E-28 175.8 18.0 226 6-239 89-373 (379)
25 TIGR01738 bioH putative pimelo 99.9 7.4E-23 1.6E-27 162.0 18.4 215 2-237 25-245 (245)
26 TIGR02427 protocat_pcaD 3-oxoa 99.9 1E-22 2.2E-27 161.6 17.8 215 3-238 35-251 (251)
27 PLN02298 hydrolase, alpha/beta 99.9 8.5E-23 1.8E-27 170.3 16.6 214 3-240 82-317 (330)
28 PF12697 Abhydrolase_6: Alpha/ 99.9 1.2E-23 2.5E-28 164.4 10.4 203 3-232 20-228 (228)
29 PHA02857 monoglyceride lipase; 99.9 1.2E-22 2.6E-27 165.1 15.6 214 2-240 46-273 (276)
30 PLN02894 hydrolase, alpha/beta 99.9 1.7E-22 3.8E-27 172.2 17.2 231 3-240 127-385 (402)
31 PLN02211 methyl indole-3-aceta 99.9 2.6E-22 5.7E-27 162.9 17.1 222 3-240 40-270 (273)
32 KOG1454 Predicted hydrolase/ac 99.9 5.9E-22 1.3E-26 163.7 18.3 222 1-240 78-324 (326)
33 TIGR01250 pro_imino_pep_2 prol 99.9 4.4E-22 9.5E-27 161.4 15.4 219 5-238 50-288 (288)
34 TIGR03695 menH_SHCHC 2-succiny 99.9 2.7E-21 5.8E-26 153.1 19.3 219 2-238 22-251 (251)
35 PRK10749 lysophospholipase L2; 99.9 1.5E-21 3.3E-26 162.7 18.0 230 3-240 76-329 (330)
36 PF00561 Abhydrolase_1: alpha/ 99.9 8.2E-22 1.8E-26 155.2 8.1 215 9-234 1-229 (230)
37 PRK14875 acetoin dehydrogenase 99.9 1.4E-20 3.1E-25 159.1 15.9 211 3-240 153-371 (371)
38 PRK06765 homoserine O-acetyltr 99.8 7.4E-20 1.6E-24 154.7 18.1 227 6-239 97-387 (389)
39 PLN02980 2-oxoglutarate decarb 99.8 3.2E-20 7E-25 180.3 17.8 221 3-239 1393-1638(1655)
40 TIGR01249 pro_imino_pep_1 prol 99.8 1.2E-19 2.7E-24 149.7 17.6 82 4-90 49-130 (306)
41 PLN02652 hydrolase; alpha/beta 99.8 2.4E-19 5.2E-24 152.1 16.9 215 3-240 158-387 (395)
42 PLN02511 hydrolase 99.8 8.8E-20 1.9E-24 155.0 11.2 218 4-239 125-364 (388)
43 PRK05855 short chain dehydroge 99.8 1.5E-19 3.3E-24 161.3 12.6 226 2-239 46-291 (582)
44 COG2267 PldB Lysophospholipase 99.8 4E-18 8.7E-23 139.5 16.5 226 2-240 55-294 (298)
45 KOG2382 Predicted alpha/beta h 99.8 5.8E-18 1.3E-22 135.8 15.9 216 8-240 80-313 (315)
46 TIGR01607 PST-A Plasmodium sub 99.8 1.4E-17 3E-22 138.9 16.5 221 2-239 68-332 (332)
47 KOG2984 Predicted hydrolase [G 99.8 1.7E-18 3.8E-23 128.8 8.3 201 9-239 72-275 (277)
48 PRK05077 frsA fermentation/res 99.8 5.3E-17 1.2E-21 138.8 18.5 192 3-240 217-412 (414)
49 TIGR03100 hydr1_PEP hydrolase, 99.7 3.8E-17 8.2E-22 132.8 13.9 207 2-239 51-274 (274)
50 KOG1455 Lysophospholipase [Lip 99.7 1.5E-16 3.1E-21 126.0 13.1 217 2-241 76-313 (313)
51 TIGR01838 PHA_synth_I poly(R)- 99.7 2.2E-16 4.8E-21 137.5 14.4 219 2-227 214-462 (532)
52 PRK10985 putative hydrolase; P 99.7 1E-15 2.2E-20 127.4 16.1 48 177-225 253-300 (324)
53 COG0596 MhpC Predicted hydrola 99.6 7.1E-15 1.5E-19 116.4 15.3 220 9-238 51-280 (282)
54 TIGR01836 PHA_synth_III_C poly 99.6 2.7E-15 5.9E-20 126.1 11.8 63 177-240 284-350 (350)
55 KOG2931 Differentiation-relate 99.6 1.1E-13 2.4E-18 109.0 15.9 225 2-240 73-306 (326)
56 COG1647 Esterase/lipase [Gener 99.6 4.8E-14 1E-18 106.9 12.3 201 3-239 37-243 (243)
57 PF03096 Ndr: Ndr family; Int 99.6 1E-14 2.3E-19 116.0 8.0 222 3-240 51-279 (283)
58 PRK07868 acyl-CoA synthetase; 99.5 7.8E-14 1.7E-18 131.5 14.0 64 176-240 294-361 (994)
59 PLN02872 triacylglycerol lipas 99.5 5.9E-13 1.3E-17 112.9 13.3 65 176-240 320-389 (395)
60 COG2021 MET2 Homoserine acetyl 99.5 1.4E-12 3.1E-17 106.4 14.6 231 6-239 90-367 (368)
61 KOG2564 Predicted acetyltransf 99.5 7.3E-13 1.6E-17 103.7 11.1 74 8-88 102-180 (343)
62 PRK11071 esterase YqiA; Provis 99.4 9.1E-12 2E-16 95.7 15.8 157 8-238 32-189 (190)
63 PRK10566 esterase; Provisional 99.4 5.9E-12 1.3E-16 100.8 15.1 58 179-240 186-248 (249)
64 PRK13604 luxD acyl transferase 99.4 6.8E-12 1.5E-16 101.8 14.8 47 177-223 200-247 (307)
65 PF06342 DUF1057: Alpha/beta h 99.3 1.1E-10 2.5E-15 92.2 16.3 213 2-238 56-297 (297)
66 PF00326 Peptidase_S9: Prolyl 99.3 3.5E-11 7.6E-16 94.1 11.3 62 178-240 143-209 (213)
67 TIGR03101 hydr2_PEP hydrolase, 99.2 3.2E-11 7E-16 97.0 8.1 79 3-89 51-133 (266)
68 COG3208 GrsT Predicted thioest 99.2 5.1E-10 1.1E-14 86.8 13.4 196 8-238 33-234 (244)
69 TIGR01839 PHA_synth_II poly(R) 99.1 1.3E-09 2.9E-14 94.8 14.2 79 2-91 241-329 (560)
70 KOG1552 Predicted alpha/beta h 99.1 9E-10 2E-14 86.0 10.9 161 8-238 88-250 (258)
71 PF12695 Abhydrolase_5: Alpha/ 99.1 1.5E-09 3.4E-14 79.2 9.6 123 3-220 21-145 (145)
72 KOG4667 Predicted esterase [Li 98.9 2E-08 4.3E-13 76.3 11.6 196 3-237 57-255 (269)
73 TIGR01849 PHB_depoly_PhaZ poly 98.9 5.2E-08 1.1E-12 82.5 15.1 65 176-240 334-406 (406)
74 KOG2565 Predicted hydrolases o 98.9 3.3E-08 7.1E-13 80.8 12.5 73 9-88 189-262 (469)
75 COG1506 DAP2 Dipeptidyl aminop 98.9 1.8E-08 4E-13 90.8 11.5 64 177-240 549-616 (620)
76 TIGR03230 lipo_lipase lipoprot 98.9 9.4E-09 2E-13 87.8 8.9 75 8-89 73-153 (442)
77 PLN02442 S-formylglutathione h 98.9 7.7E-08 1.7E-12 78.6 13.4 83 4-89 73-177 (283)
78 COG0429 Predicted hydrolase of 98.8 2.4E-08 5.2E-13 80.8 9.3 63 176-239 271-339 (345)
79 TIGR02821 fghA_ester_D S-formy 98.8 8E-07 1.7E-11 72.3 18.4 82 6-89 70-172 (275)
80 PLN00021 chlorophyllase 98.8 5.7E-08 1.2E-12 80.3 11.4 75 2-88 73-164 (313)
81 PF06500 DUF1100: Alpha/beta h 98.7 2.3E-07 5.1E-12 78.1 11.8 194 2-239 212-408 (411)
82 KOG4391 Predicted alpha/beta h 98.7 7E-08 1.5E-12 73.5 7.2 175 7-239 105-281 (300)
83 COG3243 PhaC Poly(3-hydroxyalk 98.6 8.4E-07 1.8E-11 74.1 11.7 82 3-90 134-217 (445)
84 COG2945 Predicted hydrolase of 98.6 1.5E-06 3.2E-11 65.1 11.8 150 3-238 55-205 (210)
85 PF01738 DLH: Dienelactone hyd 98.5 1.5E-06 3.3E-11 68.1 11.7 64 177-240 143-217 (218)
86 PF12146 Hydrolase_4: Putative 98.5 1.2E-07 2.5E-12 61.9 3.4 43 2-48 37-79 (79)
87 PRK11460 putative hydrolase; P 98.5 3E-06 6.4E-11 67.3 11.7 61 179-239 148-211 (232)
88 cd00707 Pancreat_lipase_like P 98.5 2.4E-07 5.1E-12 75.4 5.1 78 5-90 63-147 (275)
89 PRK05371 x-prolyl-dipeptidyl a 98.4 1.2E-05 2.6E-10 74.1 16.2 63 177-240 453-519 (767)
90 PF02230 Abhydrolase_2: Phosph 98.4 3.2E-06 7E-11 66.3 10.8 58 179-240 155-215 (216)
91 COG4757 Predicted alpha/beta h 98.4 2.8E-06 6E-11 65.6 9.9 61 177-237 214-280 (281)
92 PF00975 Thioesterase: Thioest 98.4 1.4E-05 3.1E-10 62.9 14.3 193 9-237 28-229 (229)
93 PF05448 AXE1: Acetyl xylan es 98.4 1.6E-05 3.5E-10 65.9 14.5 60 177-240 260-320 (320)
94 TIGR00976 /NonD putative hydro 98.4 5.1E-07 1.1E-11 80.6 5.0 79 3-89 48-131 (550)
95 PRK10252 entF enterobactin syn 98.3 2.4E-05 5.1E-10 76.7 15.6 76 3-88 1090-1169(1296)
96 COG0412 Dienelactone hydrolase 98.2 3.7E-05 8E-10 61.1 11.1 64 177-240 156-233 (236)
97 PRK10162 acetyl esterase; Prov 98.1 7E-05 1.5E-09 62.3 13.0 60 180-240 249-315 (318)
98 PF08386 Abhydrolase_4: TAP-li 98.1 1.1E-05 2.4E-10 55.5 6.8 60 179-239 34-93 (103)
99 COG3458 Acetyl esterase (deace 98.1 8.8E-05 1.9E-09 58.8 12.4 59 177-238 257-315 (321)
100 smart00824 PKS_TE Thioesterase 98.1 0.00023 5E-09 54.7 14.6 183 4-236 22-211 (212)
101 PLN02733 phosphatidylcholine-s 98.1 6.1E-06 1.3E-10 71.1 5.1 84 2-91 115-202 (440)
102 KOG1838 Alpha/beta hydrolase [ 98.0 0.0003 6.6E-09 59.3 13.8 48 177-225 320-368 (409)
103 TIGR03502 lipase_Pla1_cef extr 97.9 3.2E-05 7E-10 70.7 6.3 71 3-75 471-575 (792)
104 TIGR01840 esterase_phb esteras 97.8 7E-05 1.5E-09 58.5 7.4 82 6-89 41-129 (212)
105 PF02273 Acyl_transf_2: Acyl t 97.8 0.001 2.2E-08 52.2 12.2 181 3-226 52-242 (294)
106 PRK10115 protease 2; Provision 97.7 0.00039 8.5E-09 63.7 11.2 84 3-87 469-556 (686)
107 COG0400 Predicted esterase [Ge 97.7 0.0003 6.6E-09 54.5 8.8 119 37-239 81-204 (207)
108 PF06821 Ser_hydrolase: Serine 97.7 0.00019 4.1E-09 54.1 7.2 46 179-226 114-159 (171)
109 PF08538 DUF1749: Protein of u 97.7 0.00021 4.5E-09 58.2 7.8 62 177-238 230-303 (303)
110 PF08840 BAAT_C: BAAT / Acyl-C 97.7 0.00011 2.3E-09 57.5 5.9 45 177-221 113-163 (213)
111 PF03583 LIP: Secretory lipase 97.6 0.0014 2.9E-08 53.9 11.8 46 177-222 217-266 (290)
112 PF09752 DUF2048: Uncharacteri 97.5 0.0046 9.9E-08 51.3 13.1 57 180-238 290-347 (348)
113 PF10230 DUF2305: Uncharacteri 97.4 0.0075 1.6E-07 48.9 13.6 82 7-90 31-122 (266)
114 KOG2551 Phospholipase/carboxyh 97.3 0.00054 1.2E-08 52.8 5.8 60 177-240 161-220 (230)
115 COG3571 Predicted hydrolase of 97.3 0.0072 1.6E-07 44.4 11.1 157 3-239 38-210 (213)
116 PF05728 UPF0227: Uncharacteri 97.2 0.034 7.3E-07 42.5 13.9 53 179-237 134-186 (187)
117 PF12715 Abhydrolase_7: Abhydr 97.0 0.0019 4.1E-08 54.1 6.3 83 3-87 155-257 (390)
118 KOG1553 Predicted alpha/beta h 97.0 0.0029 6.2E-08 52.1 6.7 76 5-87 265-342 (517)
119 COG3545 Predicted esterase of 97.0 0.024 5.3E-07 42.3 11.0 60 177-239 115-178 (181)
120 PF02129 Peptidase_S15: X-Pro 96.9 0.0013 2.7E-08 53.5 4.4 81 4-89 53-135 (272)
121 COG3319 Thioesterase domains o 96.8 0.0099 2.1E-07 47.7 8.4 78 4-91 23-104 (257)
122 PTZ00472 serine carboxypeptida 96.6 0.0052 1.1E-07 53.8 6.0 61 179-239 364-458 (462)
123 KOG2281 Dipeptidyl aminopeptid 96.5 0.0066 1.4E-07 53.9 6.1 188 2-239 670-866 (867)
124 PF10142 PhoPQ_related: PhoPQ- 96.5 0.085 1.8E-06 44.6 12.5 60 177-239 260-319 (367)
125 PF06028 DUF915: Alpha/beta hy 96.2 0.092 2E-06 42.2 10.8 58 179-237 184-252 (255)
126 KOG4627 Kynurenine formamidase 96.2 0.029 6.3E-07 43.1 7.2 48 177-225 205-252 (270)
127 PF06057 VirJ: Bacterial virul 96.2 0.022 4.7E-07 43.3 6.5 74 2-88 23-105 (192)
128 PF07819 PGAP1: PGAP1-like pro 96.2 0.029 6.3E-07 44.3 7.6 79 8-92 39-125 (225)
129 PF11339 DUF3141: Protein of u 96.1 0.16 3.4E-06 44.5 12.2 54 35-91 117-176 (581)
130 COG1073 Hydrolases of the alph 96.1 0.017 3.6E-07 46.7 6.2 61 180-240 233-297 (299)
131 PF03959 FSH1: Serine hydrolas 96.1 0.0037 8.1E-08 48.8 2.1 51 176-227 158-208 (212)
132 KOG3043 Predicted hydrolase re 96.0 0.016 3.5E-07 44.9 5.4 64 177-240 162-240 (242)
133 PF00450 Peptidase_S10: Serine 96.0 0.0092 2E-07 51.3 4.3 61 179-239 330-415 (415)
134 COG0657 Aes Esterase/lipase [L 95.9 0.67 1.5E-05 38.3 14.9 45 180-225 246-292 (312)
135 PF05577 Peptidase_S28: Serine 95.8 0.035 7.6E-07 48.3 7.4 82 8-91 59-149 (434)
136 PF12740 Chlorophyllase2: Chlo 95.4 0.047 1E-06 43.8 6.0 77 2-88 38-129 (259)
137 PLN02213 sinapoylglucose-malat 95.3 0.067 1.5E-06 44.6 6.8 60 179-239 233-316 (319)
138 PF05705 DUF829: Eukaryotic pr 95.2 0.043 9.3E-07 43.6 5.3 61 177-237 176-240 (240)
139 COG2936 Predicted acyl esteras 94.8 0.068 1.5E-06 47.4 5.8 81 3-89 75-158 (563)
140 COG3509 LpqC Poly(3-hydroxybut 94.8 0.19 4.1E-06 40.8 7.8 86 3-90 85-179 (312)
141 PLN02209 serine carboxypeptida 94.2 0.19 4E-06 43.8 7.1 60 179-239 351-434 (437)
142 PLN03016 sinapoylglucose-malat 94.0 0.22 4.8E-06 43.3 7.2 60 179-239 347-430 (433)
143 PTZ00472 serine carboxypeptida 93.9 0.34 7.3E-06 42.6 8.2 74 9-88 122-214 (462)
144 KOG1282 Serine carboxypeptidas 93.4 0.23 5.1E-06 43.2 6.1 60 180-239 364-447 (454)
145 PF10503 Esterase_phd: Esteras 92.7 0.29 6.3E-06 38.4 5.3 51 37-88 79-130 (220)
146 KOG3253 Predicted alpha/beta h 92.5 0.42 9.1E-06 42.7 6.4 64 177-240 302-374 (784)
147 PF06850 PHB_depo_C: PHB de-po 92.5 0.29 6.3E-06 37.4 4.8 62 179-240 134-202 (202)
148 PF05677 DUF818: Chlamydia CHL 91.6 0.87 1.9E-05 38.0 6.9 59 7-75 170-234 (365)
149 KOG2100 Dipeptidyl aminopeptid 91.1 8.4 0.00018 36.2 13.7 181 4-238 554-745 (755)
150 PRK10439 enterobactin/ferric e 90.3 0.78 1.7E-05 39.7 5.9 51 37-88 267-321 (411)
151 KOG2183 Prolylcarboxypeptidase 87.3 0.73 1.6E-05 39.4 3.6 80 8-90 111-202 (492)
152 PF00756 Esterase: Putative es 87.0 1 2.2E-05 35.8 4.2 51 37-88 96-148 (251)
153 COG1075 LipA Predicted acetylt 86.8 2.3 5E-05 35.7 6.4 55 35-91 109-165 (336)
154 PF07859 Abhydrolase_3: alpha/ 86.1 0.95 2.1E-05 34.8 3.5 41 180-221 167-209 (211)
155 KOG2182 Hydrolytic enzymes of 86.0 2.5 5.4E-05 37.0 6.1 82 8-91 118-208 (514)
156 PF05990 DUF900: Alpha/beta hy 85.8 1.5 3.2E-05 34.8 4.5 72 10-88 50-135 (233)
157 PF12048 DUF3530: Protein of u 85.7 3.2 7E-05 34.5 6.6 42 45-88 185-227 (310)
158 PF05057 DUF676: Putative seri 84.4 1.7 3.7E-05 34.0 4.2 34 39-74 62-96 (217)
159 PF02450 LCAT: Lecithin:choles 83.4 4.9 0.00011 34.5 6.9 52 38-91 101-161 (389)
160 PF06259 Abhydrolase_8: Alpha/ 83.3 4.6 9.9E-05 30.6 5.9 54 37-92 88-146 (177)
161 KOG1515 Arylacetamide deacetyl 82.3 29 0.00063 29.2 16.4 61 179-240 267-335 (336)
162 PF01674 Lipase_2: Lipase (cla 80.0 0.92 2E-05 35.6 1.2 76 2-82 23-101 (219)
163 PF00151 Lipase: Lipase; Inte 77.9 7.1 0.00015 32.8 5.9 77 7-90 103-187 (331)
164 COG0218 Predicted GTPase [Gene 77.7 2.2 4.7E-05 32.9 2.6 32 11-49 72-103 (200)
165 PF07859 Abhydrolase_3: alpha/ 77.7 1.7 3.8E-05 33.3 2.1 72 7-88 28-108 (211)
166 KOG2624 Triglyceride lipase-ch 77.5 8.8 0.00019 33.1 6.4 65 176-240 329-398 (403)
167 PRK04940 hypothetical protein; 76.5 13 0.00029 28.2 6.5 53 181-238 126-178 (180)
168 KOG1551 Uncharacterized conser 76.1 6.8 0.00015 31.7 5.0 56 182-239 309-365 (371)
169 cd00741 Lipase Lipase. Lipase 75.6 6.8 0.00015 28.5 4.7 51 38-90 9-67 (153)
170 COG4287 PqaA PhoPQ-activated p 73.2 3.7 8E-05 34.7 3.0 61 177-240 327-387 (507)
171 KOG2112 Lysophospholipase [Lip 72.8 6.5 0.00014 30.4 4.0 56 179-239 144-203 (206)
172 COG4188 Predicted dienelactone 69.4 3.2 7E-05 35.0 1.9 54 176-229 248-303 (365)
173 PF11187 DUF2974: Protein of u 68.7 17 0.00038 28.6 5.8 31 61-91 89-124 (224)
174 PF07224 Chlorophyllase: Chlor 68.6 8.5 0.00018 31.2 4.0 75 2-88 67-155 (307)
175 PF09949 DUF2183: Uncharacteri 67.9 17 0.00037 24.7 4.9 43 40-85 52-97 (100)
176 COG1770 PtrB Protease II [Amin 67.6 11 0.00025 34.3 5.0 55 34-90 506-561 (682)
177 COG0627 Predicted esterase [Ge 67.1 11 0.00023 31.5 4.5 29 62-90 158-187 (316)
178 KOG3975 Uncharacterized conser 65.5 18 0.00039 29.1 5.2 58 179-237 242-300 (301)
179 COG2939 Carboxypeptidase C (ca 62.8 10 0.00022 33.5 3.7 59 180-239 426-490 (498)
180 TIGR01840 esterase_phb esteras 62.0 7.1 0.00015 30.1 2.5 27 179-205 168-194 (212)
181 COG4188 Predicted dienelactone 61.9 21 0.00046 30.3 5.3 24 2-25 92-117 (365)
182 KOG2237 Predicted serine prote 61.9 16 0.00034 33.4 4.7 85 4-90 495-583 (712)
183 PF00450 Peptidase_S10: Serine 60.4 17 0.00036 31.2 4.8 78 8-88 85-179 (415)
184 cd00312 Esterase_lipase Estera 59.6 16 0.00035 32.2 4.6 76 9-89 126-212 (493)
185 PF01764 Lipase_3: Lipase (cla 59.4 21 0.00046 25.2 4.5 34 38-74 49-83 (140)
186 COG4814 Uncharacterized protei 59.3 27 0.00058 28.2 5.1 60 179-239 216-286 (288)
187 KOG3724 Negative regulator of 56.9 20 0.00044 33.6 4.7 31 61-91 187-221 (973)
188 PF03681 UPF0150: Uncharacteri 56.5 15 0.00032 20.9 2.6 15 6-20 11-25 (48)
189 COG2819 Predicted hydrolase of 55.9 32 0.0007 27.8 5.2 49 38-88 119-170 (264)
190 PF08197 TT_ORF2a: pORF2a trun 55.8 8.9 0.00019 21.4 1.4 13 10-22 36-48 (49)
191 PRK05579 bifunctional phosphop 55.6 48 0.001 28.7 6.6 54 2-62 140-196 (399)
192 COG4099 Predicted peptidase [G 55.0 39 0.00083 28.1 5.5 43 45-88 259-302 (387)
193 PF07082 DUF1350: Protein of u 52.0 14 0.00031 29.5 2.6 13 2-14 41-53 (250)
194 COG3946 VirJ Type IV secretory 51.9 15 0.00033 31.6 2.9 53 3-68 282-338 (456)
195 KOG4840 Predicted hydrolases o 51.7 24 0.00053 27.9 3.8 51 35-87 85-141 (299)
196 PF05277 DUF726: Protein of un 50.5 43 0.00093 28.3 5.4 38 52-91 218-261 (345)
197 PF05576 Peptidase_S37: PS-10 50.5 19 0.00042 31.1 3.3 52 182-236 354-410 (448)
198 PF04301 DUF452: Protein of un 49.1 26 0.00056 27.4 3.6 37 182-222 168-204 (213)
199 PF11288 DUF3089: Protein of u 49.0 43 0.00094 26.1 4.8 36 36-73 77-113 (207)
200 PF10929 DUF2811: Protein of u 48.5 18 0.0004 21.6 2.1 20 222-241 3-22 (57)
201 PLN02517 phosphatidylcholine-s 47.4 25 0.00054 32.1 3.6 53 37-91 193-264 (642)
202 KOG2112 Lysophospholipase [Lip 45.6 63 0.0014 25.1 5.1 52 35-87 70-125 (206)
203 COG4553 DepA Poly-beta-hydroxy 45.6 1.3E+02 0.0028 25.0 7.1 62 179-240 339-407 (415)
204 PF07519 Tannase: Tannase and 45.4 49 0.0011 29.4 5.2 60 180-239 354-426 (474)
205 PLN02606 palmitoyl-protein thi 45.2 69 0.0015 26.6 5.6 37 54-92 95-134 (306)
206 COG2382 Fes Enterochelin ester 45.1 22 0.00049 29.2 2.8 25 62-86 183-208 (299)
207 PF05577 Peptidase_S28: Serine 44.6 38 0.00082 29.5 4.4 47 180-230 377-428 (434)
208 PLN02633 palmitoyl protein thi 43.9 79 0.0017 26.3 5.8 37 54-92 94-133 (314)
209 PF10605 3HBOH: 3HB-oligomer h 43.7 29 0.00063 31.6 3.5 44 177-220 552-603 (690)
210 cd00519 Lipase_3 Lipase (class 43.2 51 0.0011 25.7 4.6 14 61-74 133-147 (229)
211 TIGR00521 coaBC_dfp phosphopan 42.1 96 0.0021 26.8 6.4 81 3-89 137-234 (390)
212 COG1576 Uncharacterized conser 42.0 79 0.0017 23.4 4.9 40 4-59 64-103 (155)
213 KOG2624 Triglyceride lipase-ch 40.9 44 0.00094 29.0 4.1 85 3-90 101-199 (403)
214 PF02129 Peptidase_S15: X-Pro 40.2 51 0.0011 26.5 4.3 43 177-220 226-271 (272)
215 PLN02408 phospholipase A1 39.1 66 0.0014 27.5 4.8 35 39-74 184-219 (365)
216 PLN02162 triacylglycerol lipas 39.1 1E+02 0.0022 27.3 6.0 31 39-72 264-295 (475)
217 COG1598 Predicted nuclease of 37.5 89 0.0019 19.6 4.2 17 5-21 12-28 (73)
218 PF02540 NAD_synthase: NAD syn 37.5 55 0.0012 26.1 4.0 46 36-85 2-52 (242)
219 PF08013 Tagatose_6_P_K: Tagat 37.3 47 0.001 28.8 3.7 31 34-64 62-92 (424)
220 PLN02571 triacylglycerol lipas 36.9 67 0.0015 27.9 4.6 35 38-74 209-245 (413)
221 cd01714 ETF_beta The electron 36.6 1.6E+02 0.0034 22.7 6.3 51 34-86 91-145 (202)
222 TIGR03712 acc_sec_asp2 accesso 36.6 34 0.00074 30.3 2.8 48 37-89 339-388 (511)
223 PF03283 PAE: Pectinacetyleste 36.4 1.2E+02 0.0027 25.8 6.1 48 42-90 143-195 (361)
224 PF10503 Esterase_phd: Esteras 36.0 42 0.00092 26.4 3.1 24 179-202 169-192 (220)
225 KOG2029 Uncharacterized conser 35.1 1.5E+02 0.0033 27.2 6.5 74 9-91 486-573 (697)
226 PLN02324 triacylglycerol lipas 34.8 80 0.0017 27.5 4.7 34 39-73 199-233 (415)
227 KOG2486 Predicted GTPase [Gene 33.4 83 0.0018 25.9 4.3 18 9-26 183-200 (320)
228 PLN02802 triacylglycerol lipas 32.5 91 0.002 27.9 4.7 34 39-73 314-348 (509)
229 KOG2521 Uncharacterized conser 31.9 1.4E+02 0.003 25.4 5.6 62 179-240 225-290 (350)
230 PRK13982 bifunctional SbtC-lik 31.6 2.4E+02 0.0051 25.2 7.2 82 2-90 204-306 (475)
231 PLN02454 triacylglycerol lipas 31.2 1E+02 0.0022 26.8 4.8 13 61-73 233-246 (414)
232 COG3596 Predicted GTPase [Gene 30.6 67 0.0015 26.3 3.4 34 8-51 86-119 (296)
233 PLN02213 sinapoylglucose-malat 30.5 2.5E+02 0.0055 23.3 7.0 76 10-88 3-94 (319)
234 cd01852 AIG1 AIG1 (avrRpt2-ind 30.4 1.8E+02 0.0039 21.9 5.8 17 8-24 48-64 (196)
235 COG4814 Uncharacterized protei 30.1 1.8E+02 0.0038 23.7 5.5 51 37-91 116-177 (288)
236 PLN00413 triacylglycerol lipas 30.0 1.6E+02 0.0034 26.2 5.7 49 38-89 269-326 (479)
237 PF15660 Imm49: Immunity prote 29.7 39 0.00086 20.6 1.5 20 33-52 63-82 (84)
238 PF13709 DUF4159: Domain of un 29.5 1.7E+02 0.0037 22.7 5.4 38 179-217 53-90 (207)
239 KOG3086 Predicted dioxygenase 29.4 1.9E+02 0.0041 23.3 5.5 55 35-89 18-78 (296)
240 TIGR02883 spore_cwlD N-acetylm 28.4 1.5E+02 0.0032 22.5 4.9 42 10-53 1-45 (189)
241 PLN02753 triacylglycerol lipas 28.0 1.1E+02 0.0025 27.5 4.6 34 40-73 294-330 (531)
242 PRK05406 LamB/YcsF family prot 28.0 94 0.002 24.9 3.8 13 13-25 66-78 (246)
243 KOG4022 Dihydropteridine reduc 27.9 66 0.0014 24.2 2.7 22 2-23 21-42 (236)
244 COG4782 Uncharacterized protei 27.6 99 0.0021 26.4 4.0 71 9-87 147-231 (377)
245 PF02089 Palm_thioest: Palmito 27.5 2.2E+02 0.0048 23.3 5.9 37 54-92 80-118 (279)
246 PLN02310 triacylglycerol lipas 27.4 2.3E+02 0.0049 24.7 6.2 50 39-89 191-247 (405)
247 KOG3101 Esterase D [General fu 27.2 7.2 0.00016 30.5 -2.4 26 62-87 147-173 (283)
248 PRK12569 hypothetical protein; 26.8 1E+02 0.0022 24.7 3.8 13 13-25 69-81 (245)
249 PF12740 Chlorophyllase2: Chlo 26.6 1.1E+02 0.0023 24.8 3.9 48 178-226 153-211 (259)
250 PRK13256 thiopurine S-methyltr 26.5 17 0.00037 28.7 -0.6 16 2-17 59-74 (226)
251 COG2230 Cfa Cyclopropane fatty 26.3 2E+02 0.0043 23.7 5.4 47 37-85 55-103 (283)
252 COG1246 ArgA N-acetylglutamate 25.9 84 0.0018 23.2 2.9 33 12-58 73-105 (153)
253 COG3150 Predicted esterase [Ge 25.6 2.3E+02 0.0049 21.5 5.1 49 35-89 41-90 (191)
254 COG4553 DepA Poly-beta-hydroxy 25.6 93 0.002 25.9 3.4 77 9-91 131-210 (415)
255 PF06309 Torsin: Torsin; Inte 25.2 1.8E+02 0.0038 20.8 4.4 28 38-65 36-63 (127)
256 COG1866 PckA Phosphoenolpyruva 24.7 1.1E+02 0.0025 26.9 3.9 31 37-69 404-434 (529)
257 COG4947 Uncharacterized protei 24.6 32 0.00069 26.1 0.6 27 62-88 107-134 (227)
258 PF03403 PAF-AH_p_II: Platelet 24.1 17 0.00038 31.1 -1.0 17 3-19 122-138 (379)
259 PF01083 Cutinase: Cutinase; 23.7 1E+02 0.0022 23.2 3.2 50 39-91 67-123 (179)
260 KOG1200 Mitochondrial/plastidi 23.4 1.9E+02 0.0042 22.6 4.5 44 3-51 33-89 (256)
261 PF02590 SPOUT_MTase: Predicte 22.8 1.1E+02 0.0024 22.6 3.1 38 8-59 67-104 (155)
262 cd08769 DAP_dppA_2 Peptidase M 22.8 3.2E+02 0.007 22.3 6.0 52 177-235 145-198 (270)
263 PF11144 DUF2920: Protein of u 22.3 1.7E+02 0.0037 25.4 4.5 57 181-238 295-366 (403)
264 TIGR02354 thiF_fam2 thiamine b 22.2 1.5E+02 0.0032 22.8 3.9 41 45-89 14-54 (200)
265 KOG4569 Predicted lipase [Lipi 22.0 1.6E+02 0.0035 24.8 4.3 32 37-71 155-187 (336)
266 PLN02719 triacylglycerol lipas 21.2 1.9E+02 0.0041 26.0 4.6 14 60-73 302-316 (518)
267 PF10340 DUF2424: Protein of u 21.0 3.5E+02 0.0076 23.3 6.1 54 32-87 174-232 (374)
268 COG1540 Uncharacterized protei 20.7 1.4E+02 0.0031 23.8 3.4 17 10-26 63-79 (252)
269 COG0825 AccA Acetyl-CoA carbox 20.3 1.4E+02 0.0031 24.6 3.4 34 38-72 176-209 (317)
No 1
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.97 E-value=9.2e-31 Score=208.87 Aligned_cols=228 Identities=26% Similarity=0.452 Sum_probs=142.8
Q ss_pred CCCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCcc
Q 026228 1 MSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRI 80 (241)
Q Consensus 1 ~~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v 80 (241)
++.|+++||||+|+|+||||+|+.|... ..|++..++.|+.+|++.||.++ +++++|. +|+.+|+.+|+.+|++|
T Consensus 64 ~~~la~~~~rviA~DlrGyG~Sd~P~~~---~~Yt~~~l~~di~~lld~Lg~~k-~~lvgHD-wGaivaw~la~~~Perv 138 (322)
T KOG4178|consen 64 IPGLASRGYRVIAPDLRGYGFSDAPPHI---SEYTIDELVGDIVALLDHLGLKK-AFLVGHD-WGAIVAWRLALFYPERV 138 (322)
T ss_pred hhhhhhcceEEEecCCCCCCCCCCCCCc---ceeeHHHHHHHHHHHHHHhccce-eEEEecc-chhHHHHHHHHhChhhc
Confidence 3578999999999999999999999853 36899999999999999999876 6777544 46678999999999999
Q ss_pred CeEEEecCCCCCCC--CcchHHhh---------hccchh-h-hhhhhh-HHHHHHHHhhCCC--Cc-----------cCh
Q 026228 81 SKLAILNSPLTASS--PLPGLFQQ---------LRIPLL-G-EFTAQN-AIMAERFIEAGSP--YV-----------LKL 133 (241)
Q Consensus 81 ~~lvl~~~~~~~~~--~~~~~~~~---------~~~~~~-~-~~~~~~-~~~~~~~~~~~~~--~~-----------~~~ 133 (241)
+++|++|++...+. +....... .+.+.. . .+.... ......+.....+ .. +..
T Consensus 139 ~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~ 218 (322)
T KOG4178|consen 139 DGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTE 218 (322)
T ss_pred ceEEEecCCCCCcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhH
Confidence 99999998764111 11111000 001100 0 011110 1111222221111 01 111
Q ss_pred hhHhhhhccccCCCCCh-hHHHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChh-HHHHHHhcCCCceeE
Q 026228 134 DKADVYRLPYLASSGPG-FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS-VAEEFQKGNPNVVKL 211 (241)
Q Consensus 134 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~~~~ 211 (241)
...+.+...+....-.+ ...+..+++ +++ ....+..++++|+++|||+.|.+.+.. ..+.+.+.+|...+.
T Consensus 219 edi~~~~~~f~~~g~~gplNyyrn~~r-~w~------a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~ 291 (322)
T KOG4178|consen 219 EDIAFYVSKFQIDGFTGPLNYYRNFRR-NWE------AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTER 291 (322)
T ss_pred HHHHHHHhccccccccccchhhHHHhh-Cch------hccccccccccceEEEEecCcccccchhHHHHHHHhhccccce
Confidence 11122221111100000 001111111 110 011233478999999999999988765 566677788885588
Q ss_pred EEeCCCCCCCCCCChHHHHHHHHHHHhhc
Q 026228 212 QMIEGAGHMPQEDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 212 ~~i~~agH~~~~e~p~~~~~~l~~fl~~~ 240 (241)
++++|+|||+++|+|+++++++.+||.++
T Consensus 292 vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 292 VVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred EEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999875
No 2
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.96 E-value=3.3e-28 Score=204.91 Aligned_cols=231 Identities=35% Similarity=0.630 Sum_probs=139.2
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccC
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRIS 81 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~ 81 (241)
+.|++ +|+||++|+||||.|++|.... ...|+++++++++.++++++++++ ++|||+| +||.+++.+|..+|++|+
T Consensus 148 ~~L~~-~~~Via~DlpG~G~S~~p~~~~-~~~ys~~~~a~~l~~~i~~l~~~~-~~LvG~s-~GG~ia~~~a~~~P~~v~ 223 (383)
T PLN03084 148 PVLSK-NYHAIAFDWLGFGFSDKPQPGY-GFNYTLDEYVSSLESLIDELKSDK-VSLVVQG-YFSPPVVKYASAHPDKIK 223 (383)
T ss_pred HHHhc-CCEEEEECCCCCCCCCCCcccc-cccCCHHHHHHHHHHHHHHhCCCC-ceEEEEC-HHHHHHHHHHHhChHhhc
Confidence 34665 7999999999999999875421 235789999999999999999975 6777665 477889999999999999
Q ss_pred eEEEecCCCCCCC-CcchHHhhhccchhhhhhhhhHH-HHHHHHhhCCCCccChhhHhhhhccccCCCCChhHH---HHH
Q 026228 82 KLAILNSPLTASS-PLPGLFQQLRIPLLGEFTAQNAI-MAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFAL---LEA 156 (241)
Q Consensus 82 ~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 156 (241)
++|+++++..... ..+.....+.............. ....++....+..........+..++.......... ...
T Consensus 224 ~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~ 303 (383)
T PLN03084 224 KLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRS 303 (383)
T ss_pred EEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHH
Confidence 9999997643211 11111111100000000000000 000111111111111122222332222111111111 111
Q ss_pred HHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHH
Q 026228 157 ARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYF 236 (241)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~f 236 (241)
.+. ..+.....+...+...++++|+|+|||++|.+++.+..+.+.+. ++ .++++|++|||++++|+||+++++|.+|
T Consensus 304 ~~~-~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~-~~-a~l~vIp~aGH~~~~E~Pe~v~~~I~~F 380 (383)
T PLN03084 304 MKK-ELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKS-SQ-HKLIELPMAGHHVQEDCGEELGGIISGI 380 (383)
T ss_pred hhc-ccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHh-cC-CeEEEECCCCCCcchhCHHHHHHHHHHH
Confidence 111 11111111111111136799999999999999988888888776 45 5899999999999999999999999999
Q ss_pred Hhh
Q 026228 237 FLN 239 (241)
Q Consensus 237 l~~ 239 (241)
|+.
T Consensus 381 l~~ 383 (383)
T PLN03084 381 LSK 383 (383)
T ss_pred hhC
Confidence 863
No 3
>PLN02965 Probable pheophorbidase
Probab=99.96 E-value=7.6e-29 Score=199.49 Aligned_cols=219 Identities=15% Similarity=0.150 Sum_probs=132.1
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCcCcc
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSRI 80 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~~v 80 (241)
+.|+..+|+||++|+||||+|+.+... .|+++++++++.++++++++.+++++| || +||.+++.+|.++|++|
T Consensus 24 ~~L~~~~~~via~Dl~G~G~S~~~~~~----~~~~~~~a~dl~~~l~~l~~~~~~~lv--GhSmGG~ia~~~a~~~p~~v 97 (255)
T PLN02965 24 TLLDAAGFKSTCVDLTGAGISLTDSNT----VSSSDQYNRPLFALLSDLPPDHKVILV--GHSIGGGSVTEALCKFTDKI 97 (255)
T ss_pred HHHhhCCceEEEecCCcCCCCCCCccc----cCCHHHHHHHHHHHHHhcCCCCCEEEE--ecCcchHHHHHHHHhCchhe
Confidence 356666899999999999999876431 357899999999999999875457777 55 56777999999999999
Q ss_pred CeEEEecCCCCCCCCc-chHHhh-h-ccchhhhhh--hhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCCh-hHHH
Q 026228 81 SKLAILNSPLTASSPL-PGLFQQ-L-RIPLLGEFT--AQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPG-FALL 154 (241)
Q Consensus 81 ~~lvl~~~~~~~~~~~-~~~~~~-~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 154 (241)
+++|++++........ ...+.. . ......... ........ ...... ......+....... ....
T Consensus 98 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~---~~~~~~~~~~~~~~~~~~~ 167 (255)
T PLN02965 98 SMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPT-------GIMMKP---EFVRHYYYNQSPLEDYTLS 167 (255)
T ss_pred eEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcc-------hhhcCH---HHHHHHHhcCCCHHHHHHH
Confidence 9999999743211110 000000 0 000000000 00000000 000000 00000000000000 0000
Q ss_pred -HHHHhcChhh--hHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHH
Q 026228 155 -EAARKVNFKD--ISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVD 231 (241)
Q Consensus 155 -~~~~~~~~~~--~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~ 231 (241)
........+. ....+.. ...++++|+++|+|++|..+|+...+.+.+.+++ ++++++++|||++++|+|++|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~--~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~-a~~~~i~~~GH~~~~e~p~~v~~ 244 (255)
T PLN02965 168 SKLLRPAPVRAFQDLDKLPP--NPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPP-AQTYVLEDSDHSAFFSVPTTLFQ 244 (255)
T ss_pred HHhcCCCCCcchhhhhhccc--hhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCc-ceEEEecCCCCchhhcCHHHHHH
Confidence 0000000000 0001111 1125799999999999999999999999999998 58999999999999999999999
Q ss_pred HHHHHHhh
Q 026228 232 GLRYFFLN 239 (241)
Q Consensus 232 ~l~~fl~~ 239 (241)
.|.+|++.
T Consensus 245 ~l~~~~~~ 252 (255)
T PLN02965 245 YLLQAVSS 252 (255)
T ss_pred HHHHHHHH
Confidence 99999875
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=4.7e-28 Score=198.83 Aligned_cols=227 Identities=23% Similarity=0.388 Sum_probs=129.8
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccC
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRIS 81 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~ 81 (241)
+.|++. |+||++|+||||+|++|.. .|+++++++++.++++++++++ +++||++ +||.+++.+|.++|++|+
T Consensus 48 ~~L~~~-~~via~D~~G~G~S~~~~~-----~~~~~~~a~dl~~ll~~l~~~~-~~lvGhS-~Gg~ia~~~a~~~p~~v~ 119 (295)
T PRK03592 48 PHLAGL-GRCLAPDLIGMGASDKPDI-----DYTFADHARYLDAWFDALGLDD-VVLVGHD-WGSALGFDWAARHPDRVR 119 (295)
T ss_pred HHHhhC-CEEEEEcCCCCCCCCCCCC-----CCCHHHHHHHHHHHHHHhCCCC-eEEEEEC-HHHHHHHHHHHhChhhee
Confidence 456775 6999999999999998753 3588999999999999999975 6777443 577789999999999999
Q ss_pred eEEEecCCCCCCC-C-cch----HHhhhccchhhh-hhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHH
Q 026228 82 KLAILNSPLTASS-P-LPG----LFQQLRIPLLGE-FTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALL 154 (241)
Q Consensus 82 ~lvl~~~~~~~~~-~-~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (241)
++|+++++..+.. . .+. .+..++.+.... ...........+........+.......++..+... .......
T Consensus 120 ~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 198 (295)
T PRK03592 120 GIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTP-ESRRPTL 198 (295)
T ss_pred EEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCc-hhhhhhh
Confidence 9999997432110 0 010 011111110000 000000000001100000001111111111111100 0000011
Q ss_pred HHHHhcC-------hhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHH-HhcCCCceeEEEeCCCCCCCCCCCh
Q 026228 155 EAARKVN-------FKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEF-QKGNPNVVKLQMIEGAGHMPQEDWP 226 (241)
Q Consensus 155 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~-~~~~~~~~~~~~i~~agH~~~~e~p 226 (241)
...+... ........... ..++++|+|+|||++|.++++.....+ .+..++ ++++++++|||++++|+|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~--l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~~e~p 275 (295)
T PRK03592 199 SWPRELPIDGEPADVVALVEEYAQW--LATSDVPKLLINAEPGAILTTGAIRDWCRSWPNQ-LEITVFGAGLHFAQEDSP 275 (295)
T ss_pred hhhhhcCCCCcchhhHhhhhHhHHH--hccCCCCeEEEeccCCcccCcHHHHHHHHHhhhh-cceeeccCcchhhhhcCH
Confidence 1111000 00000111111 136799999999999999954444444 455666 699999999999999999
Q ss_pred HHHHHHHHHHHhhc
Q 026228 227 EKVVDGLRYFFLNY 240 (241)
Q Consensus 227 ~~~~~~l~~fl~~~ 240 (241)
++|++.|.+|+++.
T Consensus 276 ~~v~~~i~~fl~~~ 289 (295)
T PRK03592 276 EEIGAAIAAWLRRL 289 (295)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999764
No 5
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=2e-27 Score=194.32 Aligned_cols=224 Identities=21% Similarity=0.388 Sum_probs=130.6
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCe
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISK 82 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~ 82 (241)
.|++ +||||++|+||||.|++|.. ..|+.+++++++.++++++++++ ++++||. +||.+++.+|..+|++|++
T Consensus 56 ~l~~-~~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~lvG~S-~Gg~va~~~a~~~p~~v~~ 128 (286)
T PRK03204 56 ALRD-RFRCVAPDYLGFGLSERPSG----FGYQIDEHARVIGEFVDHLGLDR-YLSMGQD-WGGPISMAVAVERADRVRG 128 (286)
T ss_pred HHhC-CcEEEEECCCCCCCCCCCCc----cccCHHHHHHHHHHHHHHhCCCC-EEEEEEC-ccHHHHHHHHHhChhheeE
Confidence 4655 59999999999999988653 24688999999999999999975 6776432 5778899999999999999
Q ss_pred EEEecCCCCCCCCcc-hHHhhhc--cchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChh--HHHHHH
Q 026228 83 LAILNSPLTASSPLP-GLFQQLR--IPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGF--ALLEAA 157 (241)
Q Consensus 83 lvl~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 157 (241)
+|+++++........ ..+.... .+....... .....+++........+.......+.... ..+.. ......
T Consensus 129 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 204 (286)
T PRK03204 129 VVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILR-RNFFVERLIPAGTEHRPSSAVMAHYRAVQ---PNAAARRGVAEMP 204 (286)
T ss_pred EEEECccccCCCchhHHHHHHHhccccchhhhhh-hhHHHHHhccccccCCCCHHHHHHhcCCC---CCHHHHHHHHHHH
Confidence 999876432111000 0011000 000000000 00011112111100011111111111100 00110 000000
Q ss_pred Hh-cChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCCh-hHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHH
Q 026228 158 RK-VNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQ-SVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRY 235 (241)
Q Consensus 158 ~~-~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~-~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~ 235 (241)
.. ......+..+...+.....++|||+|||++|..+++ ...+.+.+.+|+ +++++|+++||++++|+|++|++.|.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip~-~~~~~i~~aGH~~~~e~Pe~~~~~i~~ 283 (286)
T PRK03204 205 KQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFPD-HVLVELPNAKHFIQEDAPDRIAAAIIE 283 (286)
T ss_pred HhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcCC-CeEEEcCCCcccccccCHHHHHHHHHH
Confidence 00 011111122211111112389999999999998754 456888889998 699999999999999999999999999
Q ss_pred HHh
Q 026228 236 FFL 238 (241)
Q Consensus 236 fl~ 238 (241)
||.
T Consensus 284 ~~~ 286 (286)
T PRK03204 284 RFG 286 (286)
T ss_pred hcC
Confidence 973
No 6
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=1.4e-27 Score=196.01 Aligned_cols=226 Identities=19% Similarity=0.311 Sum_probs=133.6
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCc
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGY--DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSR 79 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~--~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~ 79 (241)
+.|+++ ||||++|+||||.|+.+.... ....|+++++++++.++++++++++ +++|||. +||.+++.+|+++|++
T Consensus 50 ~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~-~~lvGhS-~Gg~va~~~a~~~p~~ 126 (294)
T PLN02824 50 PVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDP-AFVICNS-VGGVVGLQAAVDAPEL 126 (294)
T ss_pred HHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCC-eEEEEeC-HHHHHHHHHHHhChhh
Confidence 456664 899999999999998764210 0124789999999999999999965 6777432 5778899999999999
Q ss_pred cCeEEEecCCCCCC--CCcchH----Hhhhc----cchhhh-hhhh--hHHHHHHHHhh--CCCCccChhhHhhhhcccc
Q 026228 80 ISKLAILNSPLTAS--SPLPGL----FQQLR----IPLLGE-FTAQ--NAIMAERFIEA--GSPYVLKLDKADVYRLPYL 144 (241)
Q Consensus 80 v~~lvl~~~~~~~~--~~~~~~----~~~~~----~~~~~~-~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 144 (241)
|+++|+++++.... ...+.. ...+. ...... +... .......++.. .....+.....+.+...
T Consensus 127 v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 204 (294)
T PLN02824 127 VRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRP-- 204 (294)
T ss_pred eeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhc--
Confidence 99999999743211 001110 00000 000000 0000 00000111110 00000111000111000
Q ss_pred CCCCCh-hHHHHHHHh-cChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCC
Q 026228 145 ASSGPG-FALLEAARK-VNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQ 222 (241)
Q Consensus 145 ~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~ 222 (241)
...+. ...+..... ......... ..++++|+|+|||++|+.+|.+.++.+.+..++ ++++++++|||+++
T Consensus 205 -~~~~~~~~~~~~~~~~~~~~~~~~~------l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~~-~~~~~i~~~gH~~~ 276 (294)
T PLN02824 205 -GLEPGAVDVFLDFISYSGGPLPEEL------LPAVKCPVLIAWGEKDPWEPVELGRAYANFDAV-EDFIVLPGVGHCPQ 276 (294)
T ss_pred -cCCchHHHHHHHHhccccccchHHH------HhhcCCCeEEEEecCCCCCChHHHHHHHhcCCc-cceEEeCCCCCChh
Confidence 00010 000000000 000000011 126799999999999999999888888887776 59999999999999
Q ss_pred CCChHHHHHHHHHHHhhc
Q 026228 223 EDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 223 ~e~p~~~~~~l~~fl~~~ 240 (241)
+|+|++|++.|.+|+.++
T Consensus 277 ~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 277 DEAPELVNPLIESFVARH 294 (294)
T ss_pred hhCHHHHHHHHHHHHhcC
Confidence 999999999999999875
No 7
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=1.1e-27 Score=197.41 Aligned_cols=227 Identities=26% Similarity=0.358 Sum_probs=132.2
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccC
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRIS 81 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~ 81 (241)
+.|++.||+|+++|+||||+|+++... ..|+++++++++.++++++++++ +++|||. +||.+++.+|..+|++|+
T Consensus 67 ~~L~~~gy~vi~~Dl~G~G~S~~~~~~---~~~~~~~~a~~l~~~l~~l~~~~-v~lvGhS-~Gg~ia~~~a~~~p~~v~ 141 (302)
T PRK00870 67 PILAAAGHRVIAPDLIGFGRSDKPTRR---EDYTYARHVEWMRSWFEQLDLTD-VTLVCQD-WGGLIGLRLAAEHPDRFA 141 (302)
T ss_pred HHHHhCCCEEEEECCCCCCCCCCCCCc---ccCCHHHHHHHHHHHHHHcCCCC-EEEEEEC-hHHHHHHHHHHhChhhee
Confidence 357767899999999999999876432 24688999999999999999975 6776432 567789999999999999
Q ss_pred eEEEecCCCCCCCC-cchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCC-CChhHHHHHHHh
Q 026228 82 KLAILNSPLTASSP-LPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASS-GPGFALLEAARK 159 (241)
Q Consensus 82 ~lvl~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 159 (241)
+++++++....... .+.....++. .... . .......++...............+...+.... ............
T Consensus 142 ~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (302)
T PRK00870 142 RLVVANTGLPTGDGPMPDAFWAWRA-FSQY-S--PVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVP 217 (302)
T ss_pred EEEEeCCCCCCccccchHHHhhhhc-cccc-C--chhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCC
Confidence 99999864221110 0111111100 0000 0 000001111100000011111111110000000 000000000000
Q ss_pred cCh----hhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCcee---EEEeCCCCCCCCCCChHHHHHH
Q 026228 160 VNF----KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVK---LQMIEGAGHMPQEDWPEKVVDG 232 (241)
Q Consensus 160 ~~~----~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~---~~~i~~agH~~~~e~p~~~~~~ 232 (241)
... .......... ..++++|+++|||++|+.+|... +.+.+.+++ .+ +++++++||++++|+|++|++.
T Consensus 218 ~~~~~~~~~~~~~~~~~--l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~-~~~~~~~~i~~~gH~~~~e~p~~~~~~ 293 (302)
T PRK00870 218 TSPDDPAVAANRAAWAV--LERWDKPFLTAFSDSDPITGGGD-AILQKRIPG-AAGQPHPTIKGAGHFLQEDSGEELAEA 293 (302)
T ss_pred CCCCCcchHHHHHHHHh--hhcCCCceEEEecCCCCcccCch-HHHHhhccc-ccccceeeecCCCccchhhChHHHHHH
Confidence 000 0000000000 13689999999999999998765 778888887 35 7899999999999999999999
Q ss_pred HHHHHhhcC
Q 026228 233 LRYFFLNYT 241 (241)
Q Consensus 233 l~~fl~~~~ 241 (241)
|.+||+++.
T Consensus 294 l~~fl~~~~ 302 (302)
T PRK00870 294 VLEFIRATP 302 (302)
T ss_pred HHHHHhcCC
Confidence 999998763
No 8
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.95 E-value=3.1e-27 Score=192.24 Aligned_cols=216 Identities=17% Similarity=0.203 Sum_probs=131.0
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCe
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISK 82 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~ 82 (241)
.|++ +|+||++|+||||+|+.|.. .++++++++++.++++.+++++ ++|||++ +||.+++.+|.++|++|++
T Consensus 47 ~L~~-~~~vi~~Dl~G~G~S~~~~~-----~~~~~~~~~~~~~~i~~l~~~~-~~LvG~S-~GG~va~~~a~~~p~~v~~ 118 (276)
T TIGR02240 47 ALDP-DLEVIAFDVPGVGGSSTPRH-----PYRFPGLAKLAARMLDYLDYGQ-VNAIGVS-WGGALAQQFAHDYPERCKK 118 (276)
T ss_pred Hhcc-CceEEEECCCCCCCCCCCCC-----cCcHHHHHHHHHHHHHHhCcCc-eEEEEEC-HHHHHHHHHHHHCHHHhhh
Confidence 4666 69999999999999987643 3578999999999999999875 6777432 5778899999999999999
Q ss_pred EEEecCCCCCC-CC-cchHHhhhccchhhhhhhhhH--HHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHH
Q 026228 83 LAILNSPLTAS-SP-LPGLFQQLRIPLLGEFTAQNA--IMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAAR 158 (241)
Q Consensus 83 lvl~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (241)
+|+++++.... .+ .+........+ ..+..... .....++.. ...........+..........+. ......
T Consensus 119 lvl~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 193 (276)
T TIGR02240 119 LILAATAAGAVMVPGKPKVLMMMASP--RRYIQPSHGIHIAPDIYGG--AFRRDPELAMAHASKVRSGGKLGY-YWQLFA 193 (276)
T ss_pred eEEeccCCccccCCCchhHHHHhcCc--hhhhccccccchhhhhccc--eeeccchhhhhhhhhcccCCCchH-HHHHHH
Confidence 99999764211 11 11110000000 00000000 000001100 000000000000000000000000 000000
Q ss_pred hcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 159 KVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
..... .... ..++++|+|+|||++|+++|++..+.+.+.+++ ++++++++ ||++++|+|+++++.|.+|+.
T Consensus 194 ~~~~~-~~~~------l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~-~~~~~i~~-gH~~~~e~p~~~~~~i~~fl~ 264 (276)
T TIGR02240 194 GLGWT-SIHW------LHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPN-AELHIIDD-GHLFLITRAEAVAPIIMKFLA 264 (276)
T ss_pred HcCCc-hhhH------hhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCC-CEEEEEcC-CCchhhccHHHHHHHHHHHHH
Confidence 00000 0011 136899999999999999999988989999998 69999975 999999999999999999997
Q ss_pred hc
Q 026228 239 NY 240 (241)
Q Consensus 239 ~~ 240 (241)
++
T Consensus 265 ~~ 266 (276)
T TIGR02240 265 EE 266 (276)
T ss_pred Hh
Confidence 64
No 9
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=1.2e-26 Score=195.45 Aligned_cols=223 Identities=22% Similarity=0.300 Sum_probs=128.4
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHh-cCcCcc
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWAL-KNPSRI 80 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~-~~p~~v 80 (241)
+.|++ +|+||++|+||||+|+++.. ..|+++++++++.++++++++++ ++||||+ +||.+++.+++ .+|++|
T Consensus 109 ~~L~~-~~~via~Dl~G~G~S~~~~~----~~~~~~~~a~~l~~~l~~l~~~~-~~lvGhS-~Gg~ia~~~a~~~~P~rV 181 (360)
T PLN02679 109 GVLAK-NYTVYAIDLLGFGASDKPPG----FSYTMETWAELILDFLEEVVQKP-TVLIGNS-VGSLACVIAASESTRDLV 181 (360)
T ss_pred HHHhc-CCEEEEECCCCCCCCCCCCC----ccccHHHHHHHHHHHHHHhcCCC-eEEEEEC-HHHHHHHHHHHhcChhhc
Confidence 34666 69999999999999988642 24688999999999999999975 6777432 45667777776 589999
Q ss_pred CeEEEecCCCCCCCC--cchHHhhhccchhh--hhhhhh-------------HHHHHHHHhh--CCCCccChhhHhhhhc
Q 026228 81 SKLAILNSPLTASSP--LPGLFQQLRIPLLG--EFTAQN-------------AIMAERFIEA--GSPYVLKLDKADVYRL 141 (241)
Q Consensus 81 ~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~-------------~~~~~~~~~~--~~~~~~~~~~~~~~~~ 141 (241)
+++|+++++...... ..........+... .+.... ....+.++.. ..+..+.....+.+..
T Consensus 182 ~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (360)
T PLN02679 182 RGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRG 261 (360)
T ss_pred CEEEEECCccccccccccchHHHhhhcchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHh
Confidence 999999975321110 01110000000000 000000 0001111110 0011111111111111
Q ss_pred cccCCCCChhHHHHHHHhc-ChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhH-----HHHHHhcCCCceeEEEeC
Q 026228 142 PYLASSGPGFALLEAARKV-NFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSV-----AEEFQKGNPNVVKLQMIE 215 (241)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~-----~~~~~~~~~~~~~~~~i~ 215 (241)
... . ......+...... ...+.... ..++++|||+|||++|+.+|++. ...+.+.+|+ +++++|+
T Consensus 262 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~------l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~-~~l~~i~ 332 (360)
T PLN02679 262 PAD-D-EGALDAFVSIVTGPPGPNPIKL------IPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPN-VTLYVLE 332 (360)
T ss_pred hcc-C-CChHHHHHHHHhcCCCCCHHHH------hhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCc-eEEEEcC
Confidence 000 0 0000111111000 00011111 12679999999999999988753 2346667888 6999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhc
Q 026228 216 GAGHMPQEDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 216 ~agH~~~~e~p~~~~~~l~~fl~~~ 240 (241)
||||++++|+|++|++.|.+||.+.
T Consensus 333 ~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 333 GVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred CCCCCccccCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999753
No 10
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.94 E-value=2.2e-26 Score=187.47 Aligned_cols=217 Identities=21% Similarity=0.338 Sum_probs=127.7
Q ss_pred CcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCeE
Q 026228 4 MSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKL 83 (241)
Q Consensus 4 L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~l 83 (241)
|++.+|+|+++|+||||+|+.+.... .++. .+++++.++++.+++++ ++++||. +||.+++.+|.++|++|+++
T Consensus 56 l~~~~~~vi~~D~~G~G~S~~~~~~~---~~~~-~~~~~l~~~l~~l~~~~-~~lvG~S-~Gg~ia~~~a~~~p~~v~~l 129 (282)
T TIGR03343 56 FVDAGYRVILKDSPGFNKSDAVVMDE---QRGL-VNARAVKGLMDALDIEK-AHLVGNS-MGGATALNFALEYPDRIGKL 129 (282)
T ss_pred HHhCCCEEEEECCCCCCCCCCCcCcc---cccc-hhHHHHHHHHHHcCCCC-eeEEEEC-chHHHHHHHHHhChHhhceE
Confidence 45568999999999999998764211 1122 47899999999999986 5666432 57788999999999999999
Q ss_pred EEecCCCCCCC---CcchHHhhhccchhhhhhhhhHHHHHHHHhhC--CCCccChhhHh-hhhccccCCCCChh--HHHH
Q 026228 84 AILNSPLTASS---PLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG--SPYVLKLDKAD-VYRLPYLASSGPGF--ALLE 155 (241)
Q Consensus 84 vl~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~ 155 (241)
|+++++..... +.+. ...+. ....+..........+.... .+......... .+.. . ...+.. ....
T Consensus 130 vl~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~ 203 (282)
T TIGR03343 130 ILMGPGGLGPSLFAPMPM--EGIKL-LFKLYAEPSYETLKQMLNVFLFDQSLITEELLQGRWEN-I--QRQPEHLKNFLI 203 (282)
T ss_pred EEECCCCCCccccccCch--HHHHH-HHHHhcCCCHHHHHHHHhhCccCcccCcHHHHHhHHHH-h--hcCHHHHHHHHH
Confidence 99986432110 0110 00000 00000000000011111000 00000000000 0000 0 000000 0000
Q ss_pred HHHhcCh--hhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHH
Q 026228 156 AARKVNF--KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGL 233 (241)
Q Consensus 156 ~~~~~~~--~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l 233 (241)
....... .+.... ..++++|+|+++|++|..++++.++.+.+.+|+ ++++++++|||++++|+|++|++.|
T Consensus 204 ~~~~~~~~~~~~~~~------l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~-~~~~~i~~agH~~~~e~p~~~~~~i 276 (282)
T TIGR03343 204 SSQKAPLSTWDVTAR------LGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPD-AQLHVFSRCGHWAQWEHADAFNRLV 276 (282)
T ss_pred hccccccccchHHHH------HhhCCCCEEEEEccCCCcCCchhHHHHHHhCCC-CEEEEeCCCCcCCcccCHHHHHHHH
Confidence 0000000 000011 126899999999999999999889999999998 6999999999999999999999999
Q ss_pred HHHHhh
Q 026228 234 RYFFLN 239 (241)
Q Consensus 234 ~~fl~~ 239 (241)
.+||++
T Consensus 277 ~~fl~~ 282 (282)
T TIGR03343 277 IDFLRN 282 (282)
T ss_pred HHHhhC
Confidence 999964
No 11
>PRK07581 hypothetical protein; Validated
Probab=99.94 E-value=5.9e-26 Score=189.94 Aligned_cols=226 Identities=17% Similarity=0.258 Sum_probs=128.8
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHH-----HHHHHHHH----HHHHcCCCCCeEEEEeCc-cccHHHHHH
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTEN-----EFHEELDK----LLDVLEVKYPFFLVVQGF-LVGSYGLTW 72 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~-----~~a~~l~~----~l~~l~~~~~~~lv~~g~-~gG~~~~~~ 72 (241)
.|...+||||++|+||||.|+.|.... ..|+++ .+++++.+ ++++||+++.++|| || +||.+++.+
T Consensus 66 ~l~~~~~~vi~~D~~G~G~S~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~~~~~lv--G~S~GG~va~~~ 141 (339)
T PRK07581 66 ALDPEKYFIIIPNMFGNGLSSSPSNTP--APFNAARFPHVTIYDNVRAQHRLLTEKFGIERLALVV--GWSMGAQQTYHW 141 (339)
T ss_pred ccCcCceEEEEecCCCCCCCCCCCCCC--CCCCCCCCCceeHHHHHHHHHHHHHHHhCCCceEEEE--EeCHHHHHHHHH
Confidence 576668999999999999998775310 112322 24566655 77899998644566 45 577789999
Q ss_pred HhcCcCccCeEEEecCCCCCCCCcchHH-hhh----cc-ch-----hh-----hhhhh-hHH----HHHHHHhhCCCCcc
Q 026228 73 ALKNPSRISKLAILNSPLTASSPLPGLF-QQL----RI-PL-----LG-----EFTAQ-NAI----MAERFIEAGSPYVL 131 (241)
Q Consensus 73 a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~----~~-~~-----~~-----~~~~~-~~~----~~~~~~~~~~~~~~ 131 (241)
|++||++|++||++++..... +..... +.. .. +. +. ..... ... ....++........
T Consensus 142 a~~~P~~V~~Lvli~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (339)
T PRK07581 142 AVRYPDMVERAAPIAGTAKTT-PHNFVFLEGLKAALTADPAFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAM 220 (339)
T ss_pred HHHCHHHHhhheeeecCCCCC-HHHHHHHHHHHHHHHhCCCCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhcccc
Confidence 999999999999998643211 111000 000 00 00 00 00000 000 00111110000000
Q ss_pred C-hhhHhh---hhccccCCCCCh-h-HHHHHHHhcCh-------hhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHH
Q 026228 132 K-LDKADV---YRLPYLASSGPG-F-ALLEAARKVNF-------KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA 198 (241)
Q Consensus 132 ~-~~~~~~---~~~~~~~~~~~~-~-~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~ 198 (241)
. ....+. +.........+. . ..+.......+ .+.... ..++++|||+|||++|..+|++..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~d~~~~------L~~I~~PtLvI~G~~D~~~p~~~~ 294 (339)
T PRK07581 221 GYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAYGGDLAAA------LGSITAKTFVMPISTDLYFPPEDC 294 (339)
T ss_pred ChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCcccCCCHHHH------HhcCCCCEEEEEeCCCCCCCHHHH
Confidence 0 000000 000000000111 0 11111111100 011111 126899999999999999999888
Q ss_pred HHHHhcCCCceeEEEeCC-CCCCCCCCChHHHHHHHHHHHhhc
Q 026228 199 EEFQKGNPNVVKLQMIEG-AGHMPQEDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 199 ~~~~~~~~~~~~~~~i~~-agH~~~~e~p~~~~~~l~~fl~~~ 240 (241)
+.+.+.+|+ ++++++++ |||++++|+|+.+++.|++||+++
T Consensus 295 ~~l~~~ip~-a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~ 336 (339)
T PRK07581 295 EAEAALIPN-AELRPIESIWGHLAGFGQNPADIAFIDAALKEL 336 (339)
T ss_pred HHHHHhCCC-CeEEEeCCCCCccccccCcHHHHHHHHHHHHHH
Confidence 888899998 69999999 999999999999999999999876
No 12
>PRK06489 hypothetical protein; Provisional
Probab=99.94 E-value=1.7e-25 Score=188.57 Aligned_cols=225 Identities=20% Similarity=0.210 Sum_probs=126.3
Q ss_pred CCCceEEeeCCCCCCCCCCCCCCCC--CCCCCHHHHHHHHHHHH-HHcCCCCCeEEEEeCc-cccHHHHHHHhcCcCccC
Q 026228 6 DAGFHCFAPDWLGFGFSDKPEKGYD--DFDFTENEFHEELDKLL-DVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSRIS 81 (241)
Q Consensus 6 ~~~~~via~Dl~G~G~S~~p~~~~~--~~~~~~~~~a~~l~~~l-~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~~v~ 81 (241)
..+|+||++|+||||+|++|..... ...|+++++++++.+++ +++++++.++++ || +||.+++.+|+++|++|+
T Consensus 103 ~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lv--G~SmGG~vAl~~A~~~P~~V~ 180 (360)
T PRK06489 103 ASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLIL--GTSMGGMHAWMWGEKYPDFMD 180 (360)
T ss_pred ccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEE--EECHHHHHHHHHHHhCchhhh
Confidence 3479999999999999987753210 01468899999988854 889998743355 55 577789999999999999
Q ss_pred eEEEecCCCCCCCCcchHHhh-----hc-cc-hh-hhhhhhh-H--HHHHHH--HhhC------CCCccChhhHhhhhcc
Q 026228 82 KLAILNSPLTASSPLPGLFQQ-----LR-IP-LL-GEFTAQN-A--IMAERF--IEAG------SPYVLKLDKADVYRLP 142 (241)
Q Consensus 82 ~lvl~~~~~~~~~~~~~~~~~-----~~-~~-~~-~~~~~~~-~--~~~~~~--~~~~------~~~~~~~~~~~~~~~~ 142 (241)
++|++++.............. ++ .. +. ..+.... . .....+ .... .............+..
T Consensus 181 ~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (360)
T PRK06489 181 ALMPMASQPTEMSGRNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDER 260 (360)
T ss_pred eeeeeccCcccccHHHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHH
Confidence 999998742211100000000 00 00 00 0000000 0 000000 0000 0000000000000000
Q ss_pred ccCCCCCh-hHHHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHH--HHHHhcCCCceeEEEeCCC--
Q 026228 143 YLASSGPG-FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA--EEFQKGNPNVVKLQMIEGA-- 217 (241)
Q Consensus 143 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~--~~~~~~~~~~~~~~~i~~a-- 217 (241)
........ .............+.... ..+|++|||+|+|++|.++|++.. +.+.+.+|+ +++++|++|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~d~~~~------L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~-a~l~~i~~a~~ 333 (360)
T PRK06489 261 LAAPVTADANDFLYQWDSSRDYNPSPD------LEKIKAPVLAINSADDERNPPETGVMEAALKRVKH-GRLVLIPASPE 333 (360)
T ss_pred HHhhhhcCHHHHHHHHHHhhccChHHH------HHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC-CeEEEECCCCC
Confidence 00000000 000000000000001111 126799999999999999988765 678889998 599999996
Q ss_pred --CCCCCCCChHHHHHHHHHHHhhc
Q 026228 218 --GHMPQEDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 218 --gH~~~~e~p~~~~~~l~~fl~~~ 240 (241)
||+++ |+|++|++.|.+||.+.
T Consensus 334 ~~GH~~~-e~P~~~~~~i~~FL~~~ 357 (360)
T PRK06489 334 TRGHGTT-GSAKFWKAYLAEFLAQV 357 (360)
T ss_pred CCCcccc-cCHHHHHHHHHHHHHhc
Confidence 99998 89999999999999865
No 13
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.94 E-value=4.5e-25 Score=177.54 Aligned_cols=213 Identities=19% Similarity=0.227 Sum_probs=122.0
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCe
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISK 82 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~ 82 (241)
.|.+ +|+||++|+||||.|+.+. .++++++++++.+ +++++ +++|||. +||.+++.+|.++|++|++
T Consensus 35 ~L~~-~~~vi~~Dl~G~G~S~~~~------~~~~~~~~~~l~~----~~~~~-~~lvGhS-~Gg~ia~~~a~~~p~~v~~ 101 (256)
T PRK10349 35 ELSS-HFTLHLVDLPGFGRSRGFG------ALSLADMAEAVLQ----QAPDK-AIWLGWS-LGGLVASQIALTHPERVQA 101 (256)
T ss_pred HHhc-CCEEEEecCCCCCCCCCCC------CCCHHHHHHHHHh----cCCCC-eEEEEEC-HHHHHHHHHHHhChHhhhe
Confidence 4555 5999999999999998643 2467777766553 56665 6777432 5677899999999999999
Q ss_pred EEEecCCCCC--CCCcchHHhhhccchhhhhhhhhHHHHHHHHhh--CCCCccChhhHhhhhccccCCCCChhHHH----
Q 026228 83 LAILNSPLTA--SSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA--GSPYVLKLDKADVYRLPYLASSGPGFALL---- 154 (241)
Q Consensus 83 lvl~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 154 (241)
+|+++++... ....+......................+.+... ........ ....+.........+.....
T Consensus 102 lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 180 (256)
T PRK10349 102 LVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQ-DARALKKTVLALPMPEVDVLNGGL 180 (256)
T ss_pred EEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHH-HHHHHHHHhhccCCCcHHHHHHHH
Confidence 9999874221 111111000000000000000000011112110 00000000 00000000000000100000
Q ss_pred HHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHH
Q 026228 155 EAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLR 234 (241)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~ 234 (241)
......+..+. + .++++|||+|||++|.++|.+..+.+.+.+++ ++++++++|||++++|+|++|++.|.
T Consensus 181 ~~~~~~~~~~~---l------~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~-~~~~~i~~~gH~~~~e~p~~f~~~l~ 250 (256)
T PRK10349 181 EILKTVDLRQP---L------QNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH-SESYIFAKAAHAPFISHPAEFCHLLV 250 (256)
T ss_pred HHHHhCccHHH---H------hhcCCCeEEEecCCCccCCHHHHHHHHHhCCC-CeEEEeCCCCCCccccCHHHHHHHHH
Confidence 11111111111 1 26799999999999999999888889898998 69999999999999999999999999
Q ss_pred HHHhh
Q 026228 235 YFFLN 239 (241)
Q Consensus 235 ~fl~~ 239 (241)
+|-++
T Consensus 251 ~~~~~ 255 (256)
T PRK10349 251 ALKQR 255 (256)
T ss_pred HHhcc
Confidence 98653
No 14
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.94 E-value=4.6e-25 Score=189.58 Aligned_cols=219 Identities=20% Similarity=0.247 Sum_probs=129.1
Q ss_pred CCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH-HHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCeEEE
Q 026228 7 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELD-KLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAI 85 (241)
Q Consensus 7 ~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~-~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~lvl 85 (241)
.+|+||++|+||||+|++|.. ..|+++++++++. .+++++++++ ++++||. +||.+++.+|.++|++|+++|+
T Consensus 231 ~~yrVia~Dl~G~G~S~~p~~----~~ytl~~~a~~l~~~ll~~lg~~k-~~LVGhS-mGG~iAl~~A~~~Pe~V~~LVL 304 (481)
T PLN03087 231 STYRLFAVDLLGFGRSPKPAD----SLYTLREHLEMIERSVLERYKVKS-FHIVAHS-LGCILALALAVKHPGAVKSLTL 304 (481)
T ss_pred CCCEEEEECCCCCCCCcCCCC----CcCCHHHHHHHHHHHHHHHcCCCC-EEEEEEC-HHHHHHHHHHHhChHhccEEEE
Confidence 589999999999999988743 2368899999994 8999999986 6776432 5677899999999999999999
Q ss_pred ecCCCCCCCCcchHHhh-hc----cchhhhhhhhhHHHHHHHHhhCCCC---cc-Chh--hHhhhhccccC---------
Q 026228 86 LNSPLTASSPLPGLFQQ-LR----IPLLGEFTAQNAIMAERFIEAGSPY---VL-KLD--KADVYRLPYLA--------- 145 (241)
Q Consensus 86 ~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~--~~~~~~~~~~~--------- 145 (241)
++++...........+. .+ ...+..... ......++...... .. ... ...........
T Consensus 305 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~ 382 (481)
T PLN03087 305 LAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAF--GASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEG 382 (481)
T ss_pred ECCCccccccchhHHHHHHHHhcccccCCcccc--chhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHH
Confidence 99764321111100000 00 000000000 00000011000000 00 000 00000000000
Q ss_pred ----CCCChhHHHHH-HHhcC--hhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCC
Q 026228 146 ----SSGPGFALLEA-ARKVN--FKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAG 218 (241)
Q Consensus 146 ----~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~ag 218 (241)
........... ..... ..+.+..+. .++++|+|+|||++|.++|++..+.+.+.+|+ +++++|++||
T Consensus 383 ~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~-----~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~-a~l~vI~~aG 456 (481)
T PLN03087 383 FFCHTHNAAWHTLHNIICGSGSKLDGYLDHVR-----DQLKCDVAIFHGGDDELIPVECSYAVKAKVPR-ARVKVIDDKD 456 (481)
T ss_pred HHhccchhhHHHHHHHHhchhhhhhhHHHHHH-----HhCCCCEEEEEECCCCCCCHHHHHHHHHhCCC-CEEEEeCCCC
Confidence 00000000000 00000 001111111 15789999999999999999999999999998 6999999999
Q ss_pred CCCCC-CChHHHHHHHHHHHhh
Q 026228 219 HMPQE-DWPEKVVDGLRYFFLN 239 (241)
Q Consensus 219 H~~~~-e~p~~~~~~l~~fl~~ 239 (241)
|++++ |+|++|++.|.+|.+.
T Consensus 457 H~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 457 HITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred CcchhhcCHHHHHHHHHHHhhc
Confidence 99996 9999999999999864
No 15
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=3e-25 Score=185.93 Aligned_cols=222 Identities=18% Similarity=0.258 Sum_probs=126.8
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCcCccC
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSRIS 81 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~~v~ 81 (241)
.|...+||||++|+||||.|.. . .++++++++++.+++++|++++.+++| || +||.+++.+|.++|++|+
T Consensus 94 ~L~~~~~~Vi~~Dl~G~g~s~~-~------~~~~~~~a~dl~~ll~~l~l~~~~~lv--G~SmGG~vA~~~A~~~P~~V~ 164 (343)
T PRK08775 94 ALDPARFRLLAFDFIGADGSLD-V------PIDTADQADAIALLLDALGIARLHAFV--GYSYGALVGLQFASRHPARVR 164 (343)
T ss_pred ccCccccEEEEEeCCCCCCCCC-C------CCCHHHHHHHHHHHHHHcCCCcceEEE--EECHHHHHHHHHHHHChHhhh
Confidence 4544479999999999998842 1 247789999999999999998765566 55 577789999999999999
Q ss_pred eEEEecCCCCCCCCcchHHhhh-ccch-hh-h--hhhhhHHHHHHH--HhhCCCCccChhhHhhhhcccc-CC--CCCh-
Q 026228 82 KLAILNSPLTASSPLPGLFQQL-RIPL-LG-E--FTAQNAIMAERF--IEAGSPYVLKLDKADVYRLPYL-AS--SGPG- 150 (241)
Q Consensus 82 ~lvl~~~~~~~~~~~~~~~~~~-~~~~-~~-~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~- 150 (241)
++|++++..... +....+... +... .. . ...........+ ...... ......+..... .. ....
T Consensus 165 ~LvLi~s~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 239 (343)
T PRK08775 165 TLVVVSGAHRAH-PYAAAWRALQRRAVALGQLQCAEKHGLALARQLAMLSYRTP----EEFEERFDAPPEVINGRVRVAA 239 (343)
T ss_pred eEEEECccccCC-HHHHHHHHHHHHHHHcCCCCCCchhHHHHHHHHHHHHcCCH----HHHHHHhCCCccccCCCccchH
Confidence 999998743211 100001100 0000 00 0 000000000000 000000 000000000000 00 0000
Q ss_pred h-HHH----HHHHhcChh---hhHHhhh-cCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcC-CCceeEEEeCC-CCC
Q 026228 151 F-ALL----EAARKVNFK---DISSRIG-AGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN-PNVVKLQMIEG-AGH 219 (241)
Q Consensus 151 ~-~~~----~~~~~~~~~---~~~~~~~-~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-~~~~~~~~i~~-agH 219 (241)
. .+. ......... .....+. ......++++|+|+|+|++|..+|++..+.+.+.+ |+ +++++|++ +||
T Consensus 240 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~-a~l~~i~~~aGH 318 (343)
T PRK08775 240 EDYLDAAGAQYVARTPVNAYLRLSESIDLHRVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPR-GSLRVLRSPYGH 318 (343)
T ss_pred HHHHHHHHHHHHHhcChhHHHHHHHHHhhcCCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCC-CeEEEEeCCccH
Confidence 0 000 000000000 0000110 01112478999999999999999988888888777 56 69999985 999
Q ss_pred CCCCCChHHHHHHHHHHHhh
Q 026228 220 MPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 220 ~~~~e~p~~~~~~l~~fl~~ 239 (241)
++++|+|++|++.|.+||.+
T Consensus 319 ~~~lE~Pe~~~~~l~~FL~~ 338 (343)
T PRK08775 319 DAFLKETDRIDAILTTALRS 338 (343)
T ss_pred HHHhcCHHHHHHHHHHHHHh
Confidence 99999999999999999964
No 16
>PLN02578 hydrolase
Probab=99.93 E-value=6.6e-25 Score=184.57 Aligned_cols=220 Identities=19% Similarity=0.264 Sum_probs=129.4
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccC
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRIS 81 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~ 81 (241)
+.|++ +|+|+++|+||||.|+++.. .|+.+.+++++.+++++++.++ +++|||+ +||.+++.+|.++|++|+
T Consensus 107 ~~l~~-~~~v~~~D~~G~G~S~~~~~-----~~~~~~~a~~l~~~i~~~~~~~-~~lvG~S-~Gg~ia~~~A~~~p~~v~ 178 (354)
T PLN02578 107 PELAK-KYKVYALDLLGFGWSDKALI-----EYDAMVWRDQVADFVKEVVKEP-AVLVGNS-LGGFTALSTAVGYPELVA 178 (354)
T ss_pred HHHhc-CCEEEEECCCCCCCCCCccc-----ccCHHHHHHHHHHHHHHhccCC-eEEEEEC-HHHHHHHHHHHhChHhcc
Confidence 35666 59999999999999998753 3578889999999999998765 6676432 577789999999999999
Q ss_pred eEEEecCCCCCCC-Cc--chH---Hh-hhccchhhhh---hh---------h--hHHHHHHHHhhC--CCCccChhhHhh
Q 026228 82 KLAILNSPLTASS-PL--PGL---FQ-QLRIPLLGEF---TA---------Q--NAIMAERFIEAG--SPYVLKLDKADV 138 (241)
Q Consensus 82 ~lvl~~~~~~~~~-~~--~~~---~~-~~~~~~~~~~---~~---------~--~~~~~~~~~~~~--~~~~~~~~~~~~ 138 (241)
++++++++..... .. ... .. .....+.... .. . .....+...... ..........+.
T Consensus 179 ~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (354)
T PLN02578 179 GVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVES 258 (354)
T ss_pred eEEEECCCccccccccccccccccccchhhHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHH
Confidence 9999987432110 00 000 00 0000000000 00 0 000000000000 000000000000
Q ss_pred hhccccCCCCCh--hHHHHHHHhc---ChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEE
Q 026228 139 YRLPYLASSGPG--FALLEAARKV---NFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQM 213 (241)
Q Consensus 139 ~~~~~~~~~~~~--~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~ 213 (241)
.. .....++ .......... .......+ ...++++|+++|||++|.+++.+.++.+.+.+|+ .++++
T Consensus 259 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~-a~l~~ 329 (354)
T PLN02578 259 IT---EPAADPNAGEVYYRLMSRFLFNQSRYTLDS-----LLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPD-TTLVN 329 (354)
T ss_pred HH---hcccCCchHHHHHHHHHHHhcCCCCCCHHH-----HhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CEEEE
Confidence 00 0000111 0111111100 00000011 0136799999999999999999888999999998 58999
Q ss_pred eCCCCCCCCCCChHHHHHHHHHHHhh
Q 026228 214 IEGAGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 214 i~~agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
+ ++||++|+|+|++|++.|.+|+..
T Consensus 330 i-~~GH~~~~e~p~~~~~~I~~fl~~ 354 (354)
T PLN02578 330 L-QAGHCPHDEVPEQVNKALLEWLSS 354 (354)
T ss_pred e-CCCCCccccCHHHHHHHHHHHHhC
Confidence 9 699999999999999999999863
No 17
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.93 E-value=1.2e-24 Score=174.62 Aligned_cols=216 Identities=15% Similarity=0.221 Sum_probs=129.3
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCe
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISK 82 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~ 82 (241)
.|++ +|+||++|+||||.|+.+. .++++++++++.++++++++++ +++||++ +||.+++.+|..+|++|++
T Consensus 38 ~l~~-~~~vi~~D~~G~G~s~~~~------~~~~~~~~~d~~~~l~~l~~~~-~~lvGhS-~Gg~va~~~a~~~~~~v~~ 108 (255)
T PRK10673 38 DLVN-DHDIIQVDMRNHGLSPRDP------VMNYPAMAQDLLDTLDALQIEK-ATFIGHS-MGGKAVMALTALAPDRIDK 108 (255)
T ss_pred HHhh-CCeEEEECCCCCCCCCCCC------CCCHHHHHHHHHHHHHHcCCCc-eEEEEEC-HHHHHHHHHHHhCHhhcce
Confidence 3555 6999999999999998653 2578999999999999999876 6776432 5677889999999999999
Q ss_pred EEEecCCCCCCC-C-cchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHHhc
Q 026228 83 LAILNSPLTASS-P-LPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKV 160 (241)
Q Consensus 83 lvl~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (241)
+|+++++..... . ....+..+......... ....... ....... ...........+... ..... ......
T Consensus 109 lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~-~~~~~-~~~~~~- 180 (255)
T PRK10673 109 LVAIDIAPVDYHVRRHDEIFAAINAVSEAGAT-TRQQAAA-IMRQHLN---EEGVIQFLLKSFVDG-EWRFN-VPVLWD- 180 (255)
T ss_pred EEEEecCCCCccchhhHHHHHHHHHhhhcccc-cHHHHHH-HHHHhcC---CHHHHHHHHhcCCcc-eeEee-HHHHHH-
Confidence 999986321110 0 00111100000000000 0000000 0000000 000000000000000 00000 000000
Q ss_pred ChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHhhc
Q 026228 161 NFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~~ 240 (241)
....+...-....+++|+|+|+|++|+.++.+..+.+.+.+++ +++++++++||++++|+|+++++.|.+||.++
T Consensus 181 ----~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~~ 255 (255)
T PRK10673 181 ----QYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQ-ARAHVIAGAGHWVHAEKPDAVLRAIRRYLNDK 255 (255)
T ss_pred ----hHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCC-cEEEEeCCCCCeeeccCHHHHHHHHHHHHhcC
Confidence 0001100011236789999999999999999899999999998 69999999999999999999999999999763
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.93 E-value=8.4e-25 Score=183.65 Aligned_cols=218 Identities=21% Similarity=0.301 Sum_probs=128.5
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC-----CCeEEEEeCc-cccHHHHHHHhcC
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK-----YPFFLVVQGF-LVGSYGLTWALKN 76 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~-----~~~~lv~~g~-~gG~~~~~~a~~~ 76 (241)
.|++.||+||++|+||||+|+.+.. +.++++++++|+.++++.+..+ .+++|+ || +||.+++.+++.+
T Consensus 110 ~l~~~g~~v~~~D~~G~G~S~~~~~----~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~Lv--GhSmGG~val~~a~~~ 183 (349)
T PLN02385 110 KIASSGYGVFAMDYPGFGLSEGLHG----YIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLF--GQSMGGAVALKVHLKQ 183 (349)
T ss_pred HHHhCCCEEEEecCCCCCCCCCCCC----CcCCHHHHHHHHHHHHHHHHhccccCCCCEEEE--EeccchHHHHHHHHhC
Confidence 4677799999999999999987542 2347889999999999988653 246666 44 6778899999999
Q ss_pred cCccCeEEEecCCCCCCC-C-cchHHhhhccchhhhhhhhhHHHHHHHHhhC--CCCccChh-hHhhhhccccCCC-CCh
Q 026228 77 PSRISKLAILNSPLTASS-P-LPGLFQQLRIPLLGEFTAQNAIMAERFIEAG--SPYVLKLD-KADVYRLPYLASS-GPG 150 (241)
Q Consensus 77 p~~v~~lvl~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~-~~~ 150 (241)
|++|+++|++++...... . .+.....+.. .+.... .. ..+.... ........ ............. ...
T Consensus 184 p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~-~~~~~~-p~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (349)
T PLN02385 184 PNAWDGAILVAPMCKIADDVVPPPLVLQILI-LLANLL-PK----AKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPR 257 (349)
T ss_pred cchhhheeEecccccccccccCchHHHHHHH-HHHHHC-CC----ceecCCCccccccccCHHHHHHhhcCcceeCCCcc
Confidence 999999999986432110 0 0111110000 000000 00 0000000 00000000 0000000000000 000
Q ss_pred h-HHHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCC-ceeEEEeCCCCCCCCCCChHH
Q 026228 151 F-ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPEK 228 (241)
Q Consensus 151 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~agH~~~~e~p~~ 228 (241)
. .....++. ...+... ..++++|+|+|||++|.++|++.++.+.+.++. ..++++|+|+||++++|+|++
T Consensus 258 ~~~~~~~l~~------~~~~~~~--l~~i~~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~ 329 (349)
T PLN02385 258 LRTAVELLRT------TQEIEMQ--LEEVSLPLLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDE 329 (349)
T ss_pred hHHHHHHHHH------HHHHHHh--cccCCCCEEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChh
Confidence 0 11111111 0011111 126899999999999999999888888776632 258999999999999999987
Q ss_pred ----HHHHHHHHHhhc
Q 026228 229 ----VVDGLRYFFLNY 240 (241)
Q Consensus 229 ----~~~~l~~fl~~~ 240 (241)
+++.|.+||.++
T Consensus 330 ~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 330 MIFQVLDDIISWLDSH 345 (349)
T ss_pred hHHHHHHHHHHHHHHh
Confidence 889999999875
No 19
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.92 E-value=1.3e-23 Score=167.51 Aligned_cols=208 Identities=13% Similarity=0.095 Sum_probs=115.4
Q ss_pred CceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCc-cCeEEEe
Q 026228 8 GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSR-ISKLAIL 86 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~-v~~lvl~ 86 (241)
+|+||++|+||||.|+.+.. .+++++++++.++++++++++ +++||+. +||.+++.+|.++|++ |++++++
T Consensus 27 ~~~vi~~D~~G~G~S~~~~~------~~~~~~~~~l~~~l~~~~~~~-~~lvG~S-~Gg~va~~~a~~~~~~~v~~lvl~ 98 (242)
T PRK11126 27 DYPRLYIDLPGHGGSAAISV------DGFADVSRLLSQTLQSYNILP-YWLVGYS-LGGRIAMYYACQGLAGGLCGLIVE 98 (242)
T ss_pred CCCEEEecCCCCCCCCCccc------cCHHHHHHHHHHHHHHcCCCC-eEEEEEC-HHHHHHHHHHHhCCcccccEEEEe
Confidence 59999999999999987642 267899999999999999875 6777432 5677899999999765 9999988
Q ss_pred cCCCCCCCCcchHHhhhcc-chhhhhhhhh--HHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHHhc---
Q 026228 87 NSPLTASSPLPGLFQQLRI-PLLGEFTAQN--AIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKV--- 160 (241)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 160 (241)
+++.... ........... ..+....... ......+........+.......+..... ...+..........
T Consensus 99 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 175 (242)
T PRK11126 99 GGNPGLQ-NAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLVAKRS--NNNGAAVAAMLEATSLA 175 (242)
T ss_pred CCCCCCC-CHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHHHhcc--cCCHHHHHHHHHhcCcc
Confidence 7643211 11110000000 0000000000 00011111000000000000000000000 00011111111100
Q ss_pred ChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHhh
Q 026228 161 NFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
...+.... ..++++|+++|||++|+.+. .+.+. .+ +++++|++|||++++|+|+++++.|..||+.
T Consensus 176 ~~~~~~~~------l~~i~~P~lii~G~~D~~~~-----~~~~~-~~-~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 241 (242)
T PRK11126 176 KQPDLRPA------LQALTFPFYYLCGERDSKFQ-----ALAQQ-LA-LPLHVIPNAGHNAHRENPAAFAASLAQILRL 241 (242)
T ss_pred cCCcHHHH------hhccCCCeEEEEeCCcchHH-----HHHHH-hc-CeEEEeCCCCCchhhhChHHHHHHHHHHHhh
Confidence 00111111 13689999999999998542 22232 35 5899999999999999999999999999964
No 20
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.92 E-value=1.2e-23 Score=168.94 Aligned_cols=228 Identities=21% Similarity=0.273 Sum_probs=132.3
Q ss_pred CCCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCcc-ccHHHHHHHhcCcCc
Q 026228 1 MSQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFL-VGSYGLTWALKNPSR 79 (241)
Q Consensus 1 ~~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~-gG~~~~~~a~~~p~~ 79 (241)
|+.|++ .+.|+|+||||+|+|++|.-+.+ ..-..+.+++-|++|..+.|+++ .+|| ||+ ||-++..||+.||++
T Consensus 110 f~~La~-~~~vyaiDllG~G~SSRP~F~~d-~~~~e~~fvesiE~WR~~~~L~K-milv--GHSfGGYLaa~YAlKyPer 184 (365)
T KOG4409|consen 110 FDDLAK-IRNVYAIDLLGFGRSSRPKFSID-PTTAEKEFVESIEQWRKKMGLEK-MILV--GHSFGGYLAAKYALKYPER 184 (365)
T ss_pred hhhhhh-cCceEEecccCCCCCCCCCCCCC-cccchHHHHHHHHHHHHHcCCcc-eeEe--eccchHHHHHHHHHhChHh
Confidence 356788 68999999999999999974431 22234689999999999999996 6776 554 566788999999999
Q ss_pred cCeEEEecCCCCCCCC-cc-------hHHhhhccchhhhhhhhhHHHHHHHHhhCCCCcc------------ChhhHhh-
Q 026228 80 ISKLAILNSPLTASSP-LP-------GLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVL------------KLDKADV- 138 (241)
Q Consensus 80 v~~lvl~~~~~~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~- 138 (241)
|+.|+|+++......+ .. ..+...-.++.. ..++...-|......+.+. ....++.
T Consensus 185 V~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~~~~~~~---~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l 261 (365)
T KOG4409|consen 185 VEKLILVSPWGFPEKPDSEPEFTKPPPEWYKALFLVAT---NFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFL 261 (365)
T ss_pred hceEEEecccccccCCCcchhhcCCChHHHhhhhhhhh---cCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHH
Confidence 9999999864433222 11 111100000000 0011111111100000000 0111121
Q ss_pred hhccccCCC-CC-hhHHHHHHHh---cChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhc-CCCceeEE
Q 026228 139 YRLPYLASS-GP-GFALLEAARK---VNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKG-NPNVVKLQ 212 (241)
Q Consensus 139 ~~~~~~~~~-~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~-~~~~~~~~ 212 (241)
+...|.... .+ +...+..+.. +..+..++++... +-+||+++|+|++| ++......++... ....++.+
T Consensus 262 ~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm~~r~~~l----~~~~pv~fiyG~~d-WmD~~~g~~~~~~~~~~~~~~~ 336 (365)
T KOG4409|consen 262 HEYIYHCNAQNPSGETAFKNLFEPGGWARRPMIQRLREL----KKDVPVTFIYGDRD-WMDKNAGLEVTKSLMKEYVEII 336 (365)
T ss_pred HHHHHHhcCCCCcHHHHHHHHHhccchhhhhHHHHHHhh----ccCCCEEEEecCcc-cccchhHHHHHHHhhcccceEE
Confidence 221121111 11 2111111111 1112233333211 22699999999988 5666566665553 22336999
Q ss_pred EeCCCCCCCCCCChHHHHHHHHHHHhhcC
Q 026228 213 MIEGAGHMPQEDWPEKVVDGLRYFFLNYT 241 (241)
Q Consensus 213 ~i~~agH~~~~e~p~~~~~~l~~fl~~~~ 241 (241)
++++|||.+.+++|+.||+.|..+++..+
T Consensus 337 ~v~~aGHhvylDnp~~Fn~~v~~~~~~~~ 365 (365)
T KOG4409|consen 337 IVPGAGHHVYLDNPEFFNQIVLEECDKVK 365 (365)
T ss_pred EecCCCceeecCCHHHHHHHHHHHHhccC
Confidence 99999999999999999999999998653
No 21
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.92 E-value=2.1e-23 Score=175.27 Aligned_cols=226 Identities=19% Similarity=0.222 Sum_probs=126.6
Q ss_pred CcCCCceEEeeCCCC--CCCCCCCC---CC--C--CCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHH
Q 026228 4 MSDAGFHCFAPDWLG--FGFSDKPE---KG--Y--DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWA 73 (241)
Q Consensus 4 L~~~~~~via~Dl~G--~G~S~~p~---~~--~--~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a 73 (241)
|...+|+||++|+|| ||.|+... .+ + +...|+++++++++.++++++++++.++++ || +||.+++.+|
T Consensus 68 l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~--G~S~Gg~ia~~~a 145 (351)
T TIGR01392 68 IDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVV--GGSMGGMQALEWA 145 (351)
T ss_pred cCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEE--EECHHHHHHHHHH
Confidence 435689999999999 56654311 11 1 012478999999999999999998635666 55 5677899999
Q ss_pred hcCcCccCeEEEecCCCCCCCCcchHHh----hhc-cchhh--hhhh---h--hHHHHHH-----------HHhhCCCCc
Q 026228 74 LKNPSRISKLAILNSPLTASSPLPGLFQ----QLR-IPLLG--EFTA---Q--NAIMAER-----------FIEAGSPYV 130 (241)
Q Consensus 74 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~----~~~-~~~~~--~~~~---~--~~~~~~~-----------~~~~~~~~~ 130 (241)
.++|++|+++|++++............. .+. .+.+. .+.. . .....+. +........
T Consensus 146 ~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~ 225 (351)
T TIGR01392 146 IDYPERVRAIVVLATSARHSAWCIAFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAP 225 (351)
T ss_pred HHChHhhheEEEEccCCcCCHHHHHHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCc
Confidence 9999999999999975422111000100 000 00000 0000 0 0000000 000000000
Q ss_pred cCh----------hhHhhhhc----cccCCCCCh-h-HHHHHHHhcChh----hhHHhhhcCCCCCCCCCCeEEEecCCC
Q 026228 131 LKL----------DKADVYRL----PYLASSGPG-F-ALLEAARKVNFK----DISSRIGAGFSSGSWDKPVLVAWGISD 190 (241)
Q Consensus 131 ~~~----------~~~~~~~~----~~~~~~~~~-~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~P~l~i~G~~D 190 (241)
... ...+.+.. .+.....+. . .........+.. +.... ..++++|+|+|+|++|
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~------l~~I~~P~Lvi~G~~D 299 (351)
T TIGR01392 226 QSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEA------LSRIKAPFLVVSITSD 299 (351)
T ss_pred ccccccccccCccchHHHHHHHHHHHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHH------HhhCCCCEEEEEeCCc
Confidence 000 00000000 000000000 0 011111111110 01111 1267999999999999
Q ss_pred CCCChhHHHHHHhcCCCceeEE-----EeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 191 KYLPQSVAEEFQKGNPNVVKLQ-----MIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~-----~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
..+|++..+.+.+.+++ .+++ ++++|||++++|+|++|+++|.+||+
T Consensus 300 ~~~p~~~~~~~a~~i~~-~~~~v~~~~i~~~~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 300 WLFPPAESRELAKALPA-AGLRVTYVEIESPYGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred cccCHHHHHHHHHHHhh-cCCceEEEEeCCCCCcchhhcCHHHHHHHHHHHhC
Confidence 99999999999999988 4655 56899999999999999999999985
No 22
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.92 E-value=2.7e-23 Score=168.45 Aligned_cols=221 Identities=19% Similarity=0.236 Sum_probs=129.8
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccC
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRIS 81 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~ 81 (241)
+.|++ +|+|+++|+||||.|+.+.. ..++++.+++++.++++++++++ ++++|+. +||.+++.+|..+|++++
T Consensus 49 ~~l~~-~~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~~l~~~i~~~~~~~-~~lvG~S-~Gg~~a~~~a~~~p~~v~ 121 (278)
T TIGR03056 49 PPLAR-SFRVVAPDLPGHGFTRAPFR----FRFTLPSMAEDLSALCAAEGLSP-DGVIGHS-AGAAIALRLALDGPVTPR 121 (278)
T ss_pred HHHhh-CcEEEeecCCCCCCCCCccc----cCCCHHHHHHHHHHHHHHcCCCC-ceEEEEC-ccHHHHHHHHHhCCcccc
Confidence 34655 69999999999999987653 24688999999999999999865 5666432 577788999999999999
Q ss_pred eEEEecCCCCCCCC-----cchHHhhh-ccchhhhhhhh---hHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhH
Q 026228 82 KLAILNSPLTASSP-----LPGLFQQL-RIPLLGEFTAQ---NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFA 152 (241)
Q Consensus 82 ~lvl~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (241)
+++++++....... .+...... ..+........ .......+.... ...........+......... ...
T Consensus 122 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~ 199 (278)
T TIGR03056 122 MVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSRGAADQQRVERLIRDT-GSLLDKAGMTYYGRLIRSPAH-VDG 199 (278)
T ss_pred eEEEEcCcccccccccccccchhhHhhhhcccchHHHHhhcccCcchhHHhhcc-ccccccchhhHHHHhhcCchh-hhH
Confidence 99999874321100 00000000 00000000000 000000010000 000000000000000000000 000
Q ss_pred HHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHH
Q 026228 153 LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDG 232 (241)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~ 232 (241)
.......+...... . ...++++|+++|+|++|..+|.+..+.+.+.+++ +++++++++||++++|+|+++++.
T Consensus 200 ~~~~~~~~~~~~~~----~--~~~~i~~P~lii~g~~D~~vp~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~ 272 (278)
T TIGR03056 200 ALSMMAQWDLAPLN----R--DLPRITIPLHLIAGEEDKAVPPDESKRAATRVPT-ATLHVVPGGGHLVHEEQADGVVGL 272 (278)
T ss_pred HHHHhhcccccchh----h--hcccCCCCEEEEEeCCCcccCHHHHHHHHHhccC-CeEEEECCCCCcccccCHHHHHHH
Confidence 00000111110000 1 1236789999999999999998888889888888 599999999999999999999999
Q ss_pred HHHHHh
Q 026228 233 LRYFFL 238 (241)
Q Consensus 233 l~~fl~ 238 (241)
|.+|++
T Consensus 273 i~~f~~ 278 (278)
T TIGR03056 273 ILQAAE 278 (278)
T ss_pred HHHHhC
Confidence 999984
No 23
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.91 E-value=4.1e-23 Score=165.01 Aligned_cols=217 Identities=23% Similarity=0.312 Sum_probs=127.9
Q ss_pred CcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCcCccCe
Q 026228 4 MSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSRISK 82 (241)
Q Consensus 4 L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~~v~~ 82 (241)
|.+ +|+|+++|+||||.|+.+.. ..++++++++++.++++.++.++ ++++ |+ +||.+++.+|..+|++|++
T Consensus 36 l~~-~~~vi~~D~~G~G~S~~~~~----~~~~~~~~~~~~~~~i~~~~~~~-~~l~--G~S~Gg~~a~~~a~~~~~~v~~ 107 (257)
T TIGR03611 36 LTQ-RFHVVTYDHRGTGRSPGELP----PGYSIAHMADDVLQLLDALNIER-FHFV--GHALGGLIGLQLALRYPERLLS 107 (257)
T ss_pred HHh-ccEEEEEcCCCCCCCCCCCc----ccCCHHHHHHHHHHHHHHhCCCc-EEEE--EechhHHHHHHHHHHChHHhHH
Confidence 444 79999999999999986532 24688999999999999999875 5666 44 5677899999999999999
Q ss_pred EEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHH-HHHHhhCCCCccChhh---HhhhhccccCCCCChhHHHHHHH
Q 026228 83 LAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMA-ERFIEAGSPYVLKLDK---ADVYRLPYLASSGPGFALLEAAR 158 (241)
Q Consensus 83 lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 158 (241)
+|++++...........+.. ....+........... ..+. . ....+.... ............... .......
T Consensus 108 ~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 183 (257)
T TIGR03611 108 LVLINAWSRPDPHTRRCFDV-RIALLQHAGPEAYVHAQALFL-Y-PADWISENAARLAADEAHALAHFPGKA-NVLRRIN 183 (257)
T ss_pred heeecCCCCCChhHHHHHHH-HHHHHhccCcchhhhhhhhhh-c-cccHhhccchhhhhhhhhcccccCccH-HHHHHHH
Confidence 99998532211000000000 0000000000000000 0000 0 000000000 000000000000000 1111100
Q ss_pred hcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 159 KVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
.....+.... ..++++|+++++|++|..+|.+..+.+.+.+++ ++++.++++||++++|+|+++++.|.+||+
T Consensus 184 ~~~~~~~~~~------~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 184 ALEAFDVSAR------LDRIQHPVLLIANRDDMLVPYTQSLRLAAALPN-AQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred HHHcCCcHHH------hcccCccEEEEecCcCcccCHHHHHHHHHhcCC-ceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 0000011111 125789999999999999999888888888888 599999999999999999999999999996
Q ss_pred h
Q 026228 239 N 239 (241)
Q Consensus 239 ~ 239 (241)
+
T Consensus 257 ~ 257 (257)
T TIGR03611 257 T 257 (257)
T ss_pred C
Confidence 4
No 24
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.91 E-value=3.1e-23 Score=175.82 Aligned_cols=226 Identities=19% Similarity=0.178 Sum_probs=126.4
Q ss_pred CCCceEEeeCCCC-CCCCCCCCCC-------C--CCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHh
Q 026228 6 DAGFHCFAPDWLG-FGFSDKPEKG-------Y--DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWAL 74 (241)
Q Consensus 6 ~~~~~via~Dl~G-~G~S~~p~~~-------~--~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~ 74 (241)
..+|+||++|+|| +|.|+.|... + .-..|+++++++++.+++++|++++.++++ |+ +||.+++.+|.
T Consensus 89 ~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lv--G~S~Gg~ia~~~a~ 166 (379)
T PRK00175 89 TDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVV--GGSMGGMQALEWAI 166 (379)
T ss_pred ccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEE--EECHHHHHHHHHHH
Confidence 3479999999999 3656544311 0 001578999999999999999998744565 45 56778999999
Q ss_pred cCcCccCeEEEecCCCCCCCCcchHH----hhhcc-ch--------------hhhhhhh---------hHHHHHHHHhhC
Q 026228 75 KNPSRISKLAILNSPLTASSPLPGLF----QQLRI-PL--------------LGEFTAQ---------NAIMAERFIEAG 126 (241)
Q Consensus 75 ~~p~~v~~lvl~~~~~~~~~~~~~~~----~~~~~-~~--------------~~~~~~~---------~~~~~~~~~~~~ 126 (241)
.+|++|+++|++++............ +.+.. +. .+..... .......|....
T Consensus 167 ~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~ 246 (379)
T PRK00175 167 DYPDRVRSALVIASSARLSAQNIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGREL 246 (379)
T ss_pred hChHhhhEEEEECCCcccCHHHHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccc
Confidence 99999999999997542111000000 00000 00 0000000 000000010000
Q ss_pred C-CCc---cC-hhhHhhhhc----cccCCCCCh-h-HHHHHHHhcCh-----hhhHHhhhcCCCCCCCCCCeEEEecCCC
Q 026228 127 S-PYV---LK-LDKADVYRL----PYLASSGPG-F-ALLEAARKVNF-----KDISSRIGAGFSSGSWDKPVLVAWGISD 190 (241)
Q Consensus 127 ~-~~~---~~-~~~~~~~~~----~~~~~~~~~-~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~P~l~i~G~~D 190 (241)
. ... .. ......+.. .+.....+. . .........+. .+.... ..+|++|||+|+|++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~------l~~I~~PtLvI~G~~D 320 (379)
T PRK00175 247 QSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAA------LARIKARFLVVSFTSD 320 (379)
T ss_pred cccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHH------HhcCCCCEEEEEECCc
Confidence 0 000 00 000000000 000000000 0 00011111110 001111 1368999999999999
Q ss_pred CCCChhHHHHHHhcCCCc---eeEEEeC-CCCCCCCCCChHHHHHHHHHHHhh
Q 026228 191 KYLPQSVAEEFQKGNPNV---VKLQMIE-GAGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~---~~~~~i~-~agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
.++|++..+.+.+.+++. +++++++ +|||++++|+|++|+++|.+||++
T Consensus 321 ~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~~L~~FL~~ 373 (379)
T PRK00175 321 WLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGRLVRAFLER 373 (379)
T ss_pred cccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHHHHHHHHHh
Confidence 999999999999988873 2667775 999999999999999999999975
No 25
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.91 E-value=7.4e-23 Score=161.99 Aligned_cols=215 Identities=20% Similarity=0.221 Sum_probs=120.1
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccC
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRIS 81 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~ 81 (241)
+.|++ +|+|+++|+||||.|+.+. .++++++++++.++++ +++++||++ +||.+++.+|.++|++++
T Consensus 25 ~~l~~-~~~vi~~d~~G~G~s~~~~------~~~~~~~~~~~~~~~~-----~~~~lvG~S-~Gg~~a~~~a~~~p~~v~ 91 (245)
T TIGR01738 25 EELSA-HFTLHLVDLPGHGRSRGFG------PLSLADAAEAIAAQAP-----DPAIWLGWS-LGGLVALHIAATHPDRVR 91 (245)
T ss_pred Hhhcc-CeEEEEecCCcCccCCCCC------CcCHHHHHHHHHHhCC-----CCeEEEEEc-HHHHHHHHHHHHCHHhhh
Confidence 35665 6999999999999997542 2467777777765532 356776432 566788899999999999
Q ss_pred eEEEecCCCCC--CCCcc-hHHhhhccchhhhhhhhhHHHHHHHHhhC--CCCccChhhHhhhhccccCCCCCh-hHHHH
Q 026228 82 KLAILNSPLTA--SSPLP-GLFQQLRIPLLGEFTAQNAIMAERFIEAG--SPYVLKLDKADVYRLPYLASSGPG-FALLE 155 (241)
Q Consensus 82 ~lvl~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 155 (241)
++|++++.... ....+ .........+............+.+.... ............... +.....+. ..+..
T Consensus 92 ~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 170 (245)
T TIGR01738 92 ALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALKQT-LLARPTPNVQVLQA 170 (245)
T ss_pred eeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHH-hhccCCCCHHHHHH
Confidence 99999864211 00011 00000000000000000000011111100 000000000000000 00000110 01111
Q ss_pred HHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHH
Q 026228 156 AARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRY 235 (241)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~ 235 (241)
........+....+ .++++|+++++|++|..+|++..+.+.+.+++ +++++++++||++++|+|++|++.|.+
T Consensus 171 ~~~~~~~~~~~~~l------~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~ 243 (245)
T TIGR01738 171 GLEILATVDLRQPL------QNISVPFLRLYGYLDGLVPAKVVPYLDKLAPH-SELYIFAKAAHAPFLSHAEAFCALLVA 243 (245)
T ss_pred HHHHhhcccHHHHH------hcCCCCEEEEeecCCcccCHHHHHHHHHhCCC-CeEEEeCCCCCCccccCHHHHHHHHHh
Confidence 11100000111111 26789999999999999999888888888987 699999999999999999999999999
Q ss_pred HH
Q 026228 236 FF 237 (241)
Q Consensus 236 fl 237 (241)
|+
T Consensus 244 fi 245 (245)
T TIGR01738 244 FK 245 (245)
T ss_pred hC
Confidence 96
No 26
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.91 E-value=1e-22 Score=161.65 Aligned_cols=215 Identities=23% Similarity=0.368 Sum_probs=127.2
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCe
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISK 82 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~ 82 (241)
.|. .+|+|+++|+||||.|+.+.. .++.+++++++.++++.++.++ ++++|+. +||.+++.+|..+|++|++
T Consensus 35 ~l~-~~~~v~~~d~~G~G~s~~~~~-----~~~~~~~~~~~~~~i~~~~~~~-v~liG~S-~Gg~~a~~~a~~~p~~v~~ 106 (251)
T TIGR02427 35 ALT-PDFRVLRYDKRGHGLSDAPEG-----PYSIEDLADDVLALLDHLGIER-AVFCGLS-LGGLIAQGLAARRPDRVRA 106 (251)
T ss_pred Hhh-cccEEEEecCCCCCCCCCCCC-----CCCHHHHHHHHHHHHHHhCCCc-eEEEEeC-chHHHHHHHHHHCHHHhHH
Confidence 344 479999999999999976542 3578999999999999999865 6666432 5677888999999999999
Q ss_pred EEEecCCCCCCCCcchHHhhhc-cchhhhhhhhhHHHHHHHHhhCCCCccC-hhhHhhhhccccCCCCChhHHHHHHHhc
Q 026228 83 LAILNSPLTASSPLPGLFQQLR-IPLLGEFTAQNAIMAERFIEAGSPYVLK-LDKADVYRLPYLASSGPGFALLEAARKV 160 (241)
Q Consensus 83 lvl~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (241)
+++++++...... ........ ..... ...........+.... .... ......+....... ............
T Consensus 107 li~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 180 (251)
T TIGR02427 107 LVLSNTAAKIGTP-ESWNARIAAVRAEG-LAALADAVLERWFTPG--FREAHPARLDLYRNMLVRQ--PPDGYAGCCAAI 180 (251)
T ss_pred HhhccCccccCch-hhHHHHHhhhhhcc-HHHHHHHHHHHHcccc--cccCChHHHHHHHHHHHhc--CHHHHHHHHHHH
Confidence 9998864321110 01100000 00000 0000000011111000 0000 00000000000000 000000000000
Q ss_pred ChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 161 NFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
...+.... ..++++|+++++|++|..+|.+....+.+.+++ .++++++++||++++|+|+++++.+.+||+
T Consensus 181 ~~~~~~~~------~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 181 RDADFRDR------LGAIAVPTLCIAGDQDGSTPPELVREIADLVPG-ARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred hcccHHHH------hhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC-ceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 00011111 125789999999999999999888888888887 589999999999999999999999999984
No 27
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=8.5e-23 Score=170.28 Aligned_cols=214 Identities=17% Similarity=0.249 Sum_probs=124.5
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC-----CCeEEEEeCccccHHHHHHHhcCc
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK-----YPFFLVVQGFLVGSYGLTWALKNP 77 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~-----~~~~lv~~g~~gG~~~~~~a~~~p 77 (241)
.|+++||+|+++|+||||+|+.+.. +..+++.+++|+.++++.+... .+++|+|| ++||++++.++..+|
T Consensus 82 ~L~~~Gy~V~~~D~rGhG~S~~~~~----~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~Gh-SmGG~ia~~~a~~~p 156 (330)
T PLN02298 82 FLAQMGFACFALDLEGHGRSEGLRA----YVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGE-SMGGAICLLIHLANP 156 (330)
T ss_pred HHHhCCCEEEEecCCCCCCCCCccc----cCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEe-cchhHHHHHHHhcCc
Confidence 4777899999999999999986432 2346788999999999988642 24666643 257778889999999
Q ss_pred CccCeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhh----CCCCccC----hhh-Hhhhh-ccccCCC
Q 026228 78 SRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA----GSPYVLK----LDK-ADVYR-LPYLASS 147 (241)
Q Consensus 78 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~----~~~-~~~~~-~~~~~~~ 147 (241)
++|+++|++++...........+.... ... ...++... .....+. ... ..... .+..-..
T Consensus 157 ~~v~~lvl~~~~~~~~~~~~~~~~~~~------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (330)
T PLN02298 157 EGFDGAVLVAPMCKISDKIRPPWPIPQ------ILT----FVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNG 226 (330)
T ss_pred ccceeEEEecccccCCcccCCchHHHH------HHH----HHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCC
Confidence 999999999864321110000000000 000 00011000 0000000 000 00000 0000000
Q ss_pred CChhH-HHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCC--CceeEEEeCCCCCCCCCC
Q 026228 148 GPGFA-LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNP--NVVKLQMIEGAGHMPQED 224 (241)
Q Consensus 148 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--~~~~~~~i~~agH~~~~e 224 (241)
.+... .....+. ...+... ..++++|+|+|||++|.++|++..+.+.+.++ + .++++++|+||+++.|
T Consensus 227 ~~~~~~~~~~~~~------~~~~~~~--l~~i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~-~~l~~~~~a~H~~~~e 297 (330)
T PLN02298 227 KPRLGTVVELLRV------TDYLGKK--LKDVSIPFIVLHGSADVVTDPDVSRALYEEAKSED-KTIKIYDGMMHSLLFG 297 (330)
T ss_pred CccHHHHHHHHHH------HHHHHHh--hhhcCCCEEEEecCCCCCCCHHHHHHHHHHhccCC-ceEEEcCCcEeeeecC
Confidence 00000 1111110 0111111 12679999999999999999998888776654 4 5999999999999999
Q ss_pred ChHH----HHHHHHHHHhhc
Q 026228 225 WPEK----VVDGLRYFFLNY 240 (241)
Q Consensus 225 ~p~~----~~~~l~~fl~~~ 240 (241)
+|+. +.+.|.+||.++
T Consensus 298 ~pd~~~~~~~~~i~~fl~~~ 317 (330)
T PLN02298 298 EPDENIEIVRRDILSWLNER 317 (330)
T ss_pred CCHHHHHHHHHHHHHHHHHh
Confidence 9965 666777887654
No 28
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.90 E-value=1.2e-23 Score=164.40 Aligned_cols=203 Identities=29% Similarity=0.405 Sum_probs=123.7
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCe
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISK 82 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~ 82 (241)
.|+ +||+|+++|+||||.|+.+.. + ..++++++++++.+++++++.++ ++++||+ +||.+++.++..+|++|++
T Consensus 20 ~l~-~~~~v~~~d~~G~G~s~~~~~-~--~~~~~~~~~~~l~~~l~~~~~~~-~~lvG~S-~Gg~~a~~~a~~~p~~v~~ 93 (228)
T PF12697_consen 20 ALA-RGYRVIAFDLPGHGRSDPPPD-Y--SPYSIEDYAEDLAELLDALGIKK-VILVGHS-MGGMIALRLAARYPDRVKG 93 (228)
T ss_dssp HHH-TTSEEEEEECTTSTTSSSHSS-G--SGGSHHHHHHHHHHHHHHTTTSS-EEEEEET-HHHHHHHHHHHHSGGGEEE
T ss_pred HHh-CCCEEEEEecCCccccccccc-c--CCcchhhhhhhhhhccccccccc-ccccccc-ccccccccccccccccccc
Confidence 454 589999999999999987653 1 13578999999999999999864 6777433 4677888999999999999
Q ss_pred EEEecCCCCCCCCcchHH-hhhccchhhhhhhh----hHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHH
Q 026228 83 LAILNSPLTASSPLPGLF-QQLRIPLLGEFTAQ----NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAA 157 (241)
Q Consensus 83 lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (241)
+|+++++.... ... .....+++...... ........+... .......+.... .........
T Consensus 94 ~vl~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-------~~~~~~~~~ 159 (228)
T PF12697_consen 94 LVLLSPPPPLP----DSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRW---FDGDEPEDLIRS-------SRRALAEYL 159 (228)
T ss_dssp EEEESESSSHH----HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HTHHHHHHHHHH-------HHHHHHHHH
T ss_pred ceeeccccccc----ccccccccchhhhhhhhccccccccccccccccc---cccccccccccc-------ccccccccc
Confidence 99998754210 000 00000000100000 000000000000 000000000000 000111111
Q ss_pred Hh-cChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHH
Q 026228 158 RK-VNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDG 232 (241)
Q Consensus 158 ~~-~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~ 232 (241)
+. ....+....+ .++++|+++++|++|..++.+..+.+.+..++ +++++++++||++++|+|++|+++
T Consensus 160 ~~~~~~~~~~~~~------~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 160 RSNLWQADLSEAL------PRIKVPVLVIHGEDDPIVPPESAEELADKLPN-AELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHHHHHH------HGSSSEEEEEEETTSSSSHHHHHHHHHHHSTT-EEEEEETTSSSTHHHHSHHHHHHH
T ss_pred ccccccccccccc------cccCCCeEEeecCCCCCCCHHHHHHHHHHCCC-CEEEEECCCCCccHHHCHHHHhcC
Confidence 10 0011111111 15689999999999999998888889888888 699999999999999999999874
No 29
>PHA02857 monoglyceride lipase; Provisional
Probab=99.90 E-value=1.2e-22 Score=165.13 Aligned_cols=214 Identities=17% Similarity=0.238 Sum_probs=121.6
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC---CCCCeEEEEeCccccHHHHHHHhcCcC
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE---VKYPFFLVVQGFLVGSYGLTWALKNPS 78 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~---~~~~~~lv~~g~~gG~~~~~~a~~~p~ 78 (241)
+.|++.||+|+++|+||||.|+..... ..++..+.+|+.++++.+. -.++++|+|+ ++||.+++.+|..+|+
T Consensus 46 ~~l~~~g~~via~D~~G~G~S~~~~~~----~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~-S~GG~ia~~~a~~~p~ 120 (276)
T PHA02857 46 ENISSLGILVFSHDHIGHGRSNGEKMM----IDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGH-SMGATISILAAYKNPN 120 (276)
T ss_pred HHHHhCCCEEEEccCCCCCCCCCccCC----cCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEc-CchHHHHHHHHHhCcc
Confidence 357778999999999999999754321 1244556666666665432 1235677643 2577788999999999
Q ss_pred ccCeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhC-----CCCccChhhHhhhh---ccccCCCCCh
Q 026228 79 RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG-----SPYVLKLDKADVYR---LPYLASSGPG 150 (241)
Q Consensus 79 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~---~~~~~~~~~~ 150 (241)
+|+++|+++++.... ..+ ....+. .. ....+.... .+..+.......+. .++.......
T Consensus 121 ~i~~lil~~p~~~~~-~~~-~~~~~~-----~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (276)
T PHA02857 121 LFTAMILMSPLVNAE-AVP-RLNLLA-----AK------LMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIK 187 (276)
T ss_pred ccceEEEeccccccc-ccc-HHHHHH-----HH------HHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCcc
Confidence 999999998643211 100 000000 00 000000000 00000000000000 0110000001
Q ss_pred hHHHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCCh---H
Q 026228 151 FALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWP---E 227 (241)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p---~ 227 (241)
......... ....+... ..++++|+|++||++|.++|++.+..+.+.+...+++++++++||+++.|+| +
T Consensus 188 ~~~~~~~~~-----~~~~~~~~--l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~ 260 (276)
T PHA02857 188 AGFASQVLK-----ATNKVRKI--IPKIKTPILILQGTNNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKK 260 (276)
T ss_pred HHHHHHHHH-----HHHHHHHh--cccCCCCEEEEecCCCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHH
Confidence 011111100 00111111 1368999999999999999999888887766433699999999999999987 5
Q ss_pred HHHHHHHHHHhhc
Q 026228 228 KVVDGLRYFFLNY 240 (241)
Q Consensus 228 ~~~~~l~~fl~~~ 240 (241)
++.+.+.+||..+
T Consensus 261 ~~~~~~~~~l~~~ 273 (276)
T PHA02857 261 SVMKEIETWIFNR 273 (276)
T ss_pred HHHHHHHHHHHHh
Confidence 7999999999765
No 30
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=1.7e-22 Score=172.16 Aligned_cols=231 Identities=18% Similarity=0.247 Sum_probs=122.3
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCe
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISK 82 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~ 82 (241)
.|++ +|+|+++|+||||.|+++...++......+.+++++.++++.+++++ ++++||. +||.+++.+|+++|++|++
T Consensus 127 ~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~-~~lvGhS-~GG~la~~~a~~~p~~v~~ 203 (402)
T PLN02894 127 ALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSN-FILLGHS-FGGYVAAKYALKHPEHVQH 203 (402)
T ss_pred HHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCC-eEEEEEC-HHHHHHHHHHHhCchhhcE
Confidence 4555 59999999999999987653211001112347788999999999975 6676432 5677889999999999999
Q ss_pred EEEecCCCCCCCCcc--hHHhhhccchhhhhhh--------hh----------HHHHHHHHhh-----CCCCccChhhHh
Q 026228 83 LAILNSPLTASSPLP--GLFQQLRIPLLGEFTA--------QN----------AIMAERFIEA-----GSPYVLKLDKAD 137 (241)
Q Consensus 83 lvl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--------~~----------~~~~~~~~~~-----~~~~~~~~~~~~ 137 (241)
+|+++++........ .........+.+.... .. .....++... .....+.....+
T Consensus 204 lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~ 283 (402)
T PLN02894 204 LILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESK 283 (402)
T ss_pred EEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhh
Confidence 999986432211111 0000000000000000 00 0000111100 000001100000
Q ss_pred hh-hcccc--CCCCChhHHHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEe
Q 026228 138 VY-RLPYL--ASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMI 214 (241)
Q Consensus 138 ~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i 214 (241)
.. ...+. .....+............. ........ ..++++|+++|+|++|.+.+ .....+.+..+..+++++|
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i 359 (402)
T PLN02894 284 LLTDYVYHTLAAKASGELCLKYIFSFGAF-ARKPLLES--ASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRV 359 (402)
T ss_pred HHHHHHHHhhcCCCchHHHHHHhccCchh-hcchHhhh--cccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEe
Confidence 00 00000 0000010001111000000 00001111 23689999999999998765 4444444444433689999
Q ss_pred CCCCCCCCCCChHHHHHHHHHHHhhc
Q 026228 215 EGAGHMPQEDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 215 ~~agH~~~~e~p~~~~~~l~~fl~~~ 240 (241)
++|||++++|+|++|+++|.+|+++|
T Consensus 360 ~~aGH~~~~E~P~~f~~~l~~~~~~~ 385 (402)
T PLN02894 360 PQGGHFVFLDNPSGFHSAVLYACRKY 385 (402)
T ss_pred CCCCCeeeccCHHHHHHHHHHHHHHh
Confidence 99999999999999999999998876
No 31
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.90 E-value=2.6e-22 Score=162.92 Aligned_cols=222 Identities=15% Similarity=0.090 Sum_probs=125.5
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCe
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISK 82 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~ 82 (241)
.|.+.||+|+++|+||||.|..+... .++++++++++.+++++++..+++++|||. +||.++..++..+|++|++
T Consensus 40 ~L~~~g~~vi~~dl~g~G~s~~~~~~----~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS-~GG~v~~~~a~~~p~~v~~ 114 (273)
T PLN02211 40 LMENSGYKVTCIDLKSAGIDQSDADS----VTTFDEYNKPLIDFLSSLPENEKVILVGHS-AGGLSVTQAIHRFPKKICL 114 (273)
T ss_pred HHHhCCCEEEEecccCCCCCCCCccc----CCCHHHHHHHHHHHHHhcCCCCCEEEEEEC-chHHHHHHHHHhChhheeE
Confidence 46667999999999999998543321 258899999999999998643457777432 5677788888899999999
Q ss_pred EEEecCCCCCCCCcchHHhhh--ccchhhhhhhhhHHHHHHHHhhC--C--CCccChhhHhhhhccccCCCCChhHH-HH
Q 026228 83 LAILNSPLTASSPLPGLFQQL--RIPLLGEFTAQNAIMAERFIEAG--S--PYVLKLDKADVYRLPYLASSGPGFAL-LE 155 (241)
Q Consensus 83 lvl~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 155 (241)
+|++++........ ....+ +.+....+. ......+.... . ...+... ......+. ........ ..
T Consensus 115 lv~~~~~~~~~g~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~ 186 (273)
T PLN02211 115 AVYVAATMLKLGFQ--TDEDMKDGVPDLSEFG---DVYELGFGLGPDQPPTSAIIKKE--FRRKILYQ-MSPQEDSTLAA 186 (273)
T ss_pred EEEeccccCCCCCC--HHHHHhccccchhhhc---cceeeeeccCCCCCCceeeeCHH--HHHHHHhc-CCCHHHHHHHH
Confidence 99997632211100 00000 000000000 00000000000 0 0000000 00000000 00000000 00
Q ss_pred HHHh-cChhhhHHhhhcCCCCCCC-CCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHH
Q 026228 156 AARK-VNFKDISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGL 233 (241)
Q Consensus 156 ~~~~-~~~~~~~~~~~~~~~~~~~-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l 233 (241)
.... .+.. .+..........++ ++|+++|+|++|..+|++..+.+.+.+++ .+++.++ +||++++|+|++|++.|
T Consensus 187 ~~~~~~~~~-~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~-~~~~~l~-~gH~p~ls~P~~~~~~i 263 (273)
T PLN02211 187 MLLRPGPIL-ALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPP-SQVYELE-SDHSPFFSTPFLLFGLL 263 (273)
T ss_pred HhcCCcCcc-ccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCc-cEEEEEC-CCCCccccCHHHHHHHH
Confidence 0000 0000 00000000001245 79999999999999999999999998888 4899996 89999999999999999
Q ss_pred HHHHhhc
Q 026228 234 RYFFLNY 240 (241)
Q Consensus 234 ~~fl~~~ 240 (241)
.++.++.
T Consensus 264 ~~~a~~~ 270 (273)
T PLN02211 264 IKAAASV 270 (273)
T ss_pred HHHHHHh
Confidence 9987654
No 32
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.89 E-value=5.9e-22 Score=163.70 Aligned_cols=222 Identities=28% Similarity=0.397 Sum_probs=127.3
Q ss_pred CCCCcCC-CceEEeeCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCc
Q 026228 1 MSQMSDA-GFHCFAPDWLGFGF-SDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNP 77 (241)
Q Consensus 1 ~~~L~~~-~~~via~Dl~G~G~-S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p 77 (241)
|+.|++. |++|+|+|++|||. |..|+. ..|+..++++.+..++...+.++ +++| || +||.+|+.+|+.+|
T Consensus 78 ~~~L~~~~~~~v~aiDl~G~g~~s~~~~~----~~y~~~~~v~~i~~~~~~~~~~~-~~lv--ghS~Gg~va~~~Aa~~P 150 (326)
T KOG1454|consen 78 VPLLSKAKGLRVLAIDLPGHGYSSPLPRG----PLYTLRELVELIRRFVKEVFVEP-VSLV--GHSLGGIVALKAAAYYP 150 (326)
T ss_pred ccccccccceEEEEEecCCCCcCCCCCCC----CceehhHHHHHHHHHHHhhcCcc-eEEE--EeCcHHHHHHHHHHhCc
Confidence 3456665 49999999999995 444443 24788999999999999998876 6777 45 56677999999999
Q ss_pred CccCeEEE---ecCCCCCCCCcchHHhhhccchhhhhhhhhHHH-------HHHHHhhC---CCCccChhhHhhhhcccc
Q 026228 78 SRISKLAI---LNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIM-------AERFIEAG---SPYVLKLDKADVYRLPYL 144 (241)
Q Consensus 78 ~~v~~lvl---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~---~~~~~~~~~~~~~~~~~~ 144 (241)
+.|+++++ ++++.............. +..+....... ....+... ............+.....
T Consensus 151 ~~V~~lv~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (326)
T KOG1454|consen 151 ETVDSLVLLDLLGPPVYSTPKGIKGLRRL----LDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLH 226 (326)
T ss_pred ccccceeeecccccccccCCcchhHHHHh----hhhhccHhhhcCccccccchhheeHhhhcceeeeccccccchhhhhh
Confidence 99999994 444332111111100000 00000000000 00000000 000000000000000000
Q ss_pred CCCCCh-hHHHHHHH-----hcCh--hhhHHhhhcCCCCCCC-CCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeC
Q 026228 145 ASSGPG-FALLEAAR-----KVNF--KDISSRIGAGFSSGSW-DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIE 215 (241)
Q Consensus 145 ~~~~~~-~~~~~~~~-----~~~~--~~~~~~~~~~~~~~~~-~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~ 215 (241)
....+. .......+ .... +.....+ .++ ++|+|++||++|+++|.+.+..+.+.+|+ +++++|+
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~pn-~~~~~I~ 299 (326)
T KOG1454|consen 227 LLSRPVKEHFHRDARLSLFLELLGFDENLLSLI------KKIWKCPVLIIWGDKDQIVPLELAEELKKKLPN-AELVEIP 299 (326)
T ss_pred heecccccchhhhheeeEEEeccCccchHHHhh------ccccCCceEEEEcCcCCccCHHHHHHHHhhCCC-ceEEEeC
Confidence 000000 00000000 0000 1111111 134 49999999999999999988888888887 6999999
Q ss_pred CCCCCCCCCChHHHHHHHHHHHhhc
Q 026228 216 GAGHMPQEDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 216 ~agH~~~~e~p~~~~~~l~~fl~~~ 240 (241)
+|||.+|+|+|+++++.|..|+.++
T Consensus 300 ~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 300 GAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred CCCcccccCCHHHHHHHHHHHHHHh
Confidence 9999999999999999999999865
No 33
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.89 E-value=4.4e-22 Score=161.39 Aligned_cols=219 Identities=21% Similarity=0.230 Sum_probs=123.6
Q ss_pred cCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCcCccCeE
Q 026228 5 SDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSRISKL 83 (241)
Q Consensus 5 ~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~~v~~l 83 (241)
.+.||+||++|+||||.|+.+.... ..++++++++++.++++++++++ ++++ || +||.+++.+|..+|++|+++
T Consensus 50 ~~~g~~vi~~d~~G~G~s~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~li--G~S~Gg~ia~~~a~~~p~~v~~l 124 (288)
T TIGR01250 50 KEEGREVIMYDQLGCGYSDQPDDSD--ELWTIDYFVDELEEVREKLGLDK-FYLL--GHSWGGMLAQEYALKYGQHLKGL 124 (288)
T ss_pred HhcCCEEEEEcCCCCCCCCCCCccc--ccccHHHHHHHHHHHHHHcCCCc-EEEE--EeehHHHHHHHHHHhCcccccee
Confidence 3348999999999999998764221 12688999999999999999876 6666 45 56778889999999999999
Q ss_pred EEecCCCCCCCCcchHHhhhccch---hhhhhhh--------hH---HHHHHHHhhCCCCccChhhHhhhhccccCCCCC
Q 026228 84 AILNSPLTASSPLPGLFQQLRIPL---LGEFTAQ--------NA---IMAERFIEAGSPYVLKLDKADVYRLPYLASSGP 149 (241)
Q Consensus 84 vl~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (241)
+++++........ .........+ ....... .. .....+..... ............. . ...
T Consensus 125 vl~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~-~~~-- 198 (288)
T TIGR01250 125 IISSMLDSAPEYV-KELNRLRKELPPEVRAAIKRCEASGDYDNPEYQEAVEVFYHHLL-CRTRKWPEALKHL-K-SGM-- 198 (288)
T ss_pred eEecccccchHHH-HHHHHHHhhcChhHHHHHHHHHhccCcchHHHHHHHHHHHHHhh-cccccchHHHHHH-h-hcc--
Confidence 9987533211000 0000000000 0000000 00 00000000000 0000000000000 0 000
Q ss_pred hhHHHHHHHhc-Chh--hhHH--hhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCC
Q 026228 150 GFALLEAARKV-NFK--DISS--RIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQED 224 (241)
Q Consensus 150 ~~~~~~~~~~~-~~~--~~~~--~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e 224 (241)
....+...... .+. ..+. .+.. ...++++|+++++|++|.+ ++.....+.+.+++ .++++++++||+++.|
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~P~lii~G~~D~~-~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e 274 (288)
T TIGR01250 199 NTNVYNIMQGPNEFTITGNLKDWDITD--KLSEIKVPTLLTVGEFDTM-TPEAAREMQELIAG-SRLVVFPDGSHMTMIE 274 (288)
T ss_pred CHHHHhcccCCccccccccccccCHHH--HhhccCCCEEEEecCCCcc-CHHHHHHHHHhccC-CeEEEeCCCCCCcccC
Confidence 00000000000 000 0000 0000 1136789999999999985 56677888888887 5899999999999999
Q ss_pred ChHHHHHHHHHHHh
Q 026228 225 WPEKVVDGLRYFFL 238 (241)
Q Consensus 225 ~p~~~~~~l~~fl~ 238 (241)
+|+++++.|.+||+
T Consensus 275 ~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 275 DPEVYFKLLSDFIR 288 (288)
T ss_pred CHHHHHHHHHHHhC
Confidence 99999999999984
No 34
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.89 E-value=2.7e-21 Score=153.15 Aligned_cols=219 Identities=25% Similarity=0.336 Sum_probs=124.3
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHH-HHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCcCc
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE-LDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSR 79 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~-l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~~ 79 (241)
+.|+ .+|+|+++|+||||.|+.+... ..+++++++++ +..+++.++.++ ++++ || +||.+++.+|.++|++
T Consensus 22 ~~L~-~~~~v~~~d~~g~G~s~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~l~--G~S~Gg~ia~~~a~~~~~~ 94 (251)
T TIGR03695 22 ELLG-PHFRCLAIDLPGHGSSQSPDEI---ERYDFEEAAQDILATLLDQLGIEP-FFLV--GYSMGGRIALYYALQYPER 94 (251)
T ss_pred HHhc-ccCeEEEEcCCCCCCCCCCCcc---ChhhHHHHHHHHHHHHHHHcCCCe-EEEE--EeccHHHHHHHHHHhCchh
Confidence 3566 5899999999999999876532 23577889988 888889988764 6666 45 5667899999999999
Q ss_pred cCeEEEecCCCCCCCCcchHHhhhccc-hhhhhhhh-hHHHHHHHHhhCC-CC--ccChh-hHhhhhccccCCCCChhHH
Q 026228 80 ISKLAILNSPLTASSPLPGLFQQLRIP-LLGEFTAQ-NAIMAERFIEAGS-PY--VLKLD-KADVYRLPYLASSGPGFAL 153 (241)
Q Consensus 80 v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~-~~--~~~~~-~~~~~~~~~~~~~~~~~~~ 153 (241)
|++++++++.................. +...+... .......+..... .. ..... ....... .... .. ...
T Consensus 95 v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~-~~~ 171 (251)
T TIGR03695 95 VQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQALRAK-RLAN-NP-EGL 171 (251)
T ss_pred eeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHHHHHh-cccc-cc-hHH
Confidence 999999886422111000000000000 00000000 0000011110000 00 00000 0000000 0000 00 001
Q ss_pred HHHHHhc---ChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHH
Q 026228 154 LEAARKV---NFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVV 230 (241)
Q Consensus 154 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~ 230 (241)
....... ...+.... ..++++|+++++|++|..++ +..+.+.+..++ .++++++++||++++|+|++++
T Consensus 172 ~~~~~~~~~~~~~~~~~~------~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~~~~~~ 243 (251)
T TIGR03695 172 AKMLRATGLGKQPSLWPK------LQALTIPVLYLCGEKDEKFV-QIAKEMQKLLPN-LTLVIIANAGHNIHLENPEAFA 243 (251)
T ss_pred HHHHHHhhhhcccchHHH------hhCCCCceEEEeeCcchHHH-HHHHHHHhcCCC-CcEEEEcCCCCCcCccChHHHH
Confidence 1111000 00011111 12678999999999998764 456777788887 5999999999999999999999
Q ss_pred HHHHHHHh
Q 026228 231 DGLRYFFL 238 (241)
Q Consensus 231 ~~l~~fl~ 238 (241)
+.|.+||+
T Consensus 244 ~~i~~~l~ 251 (251)
T TIGR03695 244 KILLAFLE 251 (251)
T ss_pred HHHHHHhC
Confidence 99999984
No 35
>PRK10749 lysophospholipase L2; Provisional
Probab=99.89 E-value=1.5e-21 Score=162.71 Aligned_cols=230 Identities=14% Similarity=0.151 Sum_probs=125.2
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHc----CCCCCeEEEEeCc-cccHHHHHHHhcC
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKG-YDDFDFTENEFHEELDKLLDVL----EVKYPFFLVVQGF-LVGSYGLTWALKN 76 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~-~~~~~~~~~~~a~~l~~~l~~l----~~~~~~~lv~~g~-~gG~~~~~~a~~~ 76 (241)
.|++.||+|+++|+||||.|+++... .....++++++++++..+++.+ +.. +++++ || +||.+++.++..+
T Consensus 76 ~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~l~--GhSmGG~ia~~~a~~~ 152 (330)
T PRK10749 76 DLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYR-KRYAL--AHSMGGAILTLFLQRH 152 (330)
T ss_pred HHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCC-CeEEE--EEcHHHHHHHHHHHhC
Confidence 46677999999999999999865321 1122357899999999999987 444 46676 45 5667788899999
Q ss_pred cCccCeEEEecCCCCCCCCcchHHhhhccchhhhhhhhh---HHHHHHHHhh-CCCCccChhhHh--hhhccccCCCC--
Q 026228 77 PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQN---AIMAERFIEA-GSPYVLKLDKAD--VYRLPYLASSG-- 148 (241)
Q Consensus 77 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~-- 148 (241)
|++|+++|+++++.......+......-........... ......+... .....+...... .+...+.....
T Consensus 153 p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 232 (330)
T PRK10749 153 PGVFDAIALCAPMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELR 232 (330)
T ss_pred CCCcceEEEECchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcc
Confidence 999999999976432111111110000000000000000 0000000000 000000000000 00000000000
Q ss_pred ChhHHHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcC-------CCceeEEEeCCCCCCC
Q 026228 149 PGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGN-------PNVVKLQMIEGAGHMP 221 (241)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~-------~~~~~~~~i~~agH~~ 221 (241)
........... ... ....+.. ...++++|+|+|||++|++++++.++.+.+.+ ++ +++++++||||.+
T Consensus 233 ~~~~~~~~~~~-~~~-~~~~~~~--~~~~i~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~-~~l~~~~gagH~~ 307 (330)
T PRK10749 233 VGGPTYHWVRE-SIL-AGEQVLA--GAGDITTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEG-GKPLVIKGAYHEI 307 (330)
T ss_pred cCCCcHHHHHH-HHH-HHHHHHh--hccCCCCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCC-ceEEEeCCCcchh
Confidence 00000000000 000 0001111 12368899999999999999998877776644 33 4899999999999
Q ss_pred CCCCh---HHHHHHHHHHHhhc
Q 026228 222 QEDWP---EKVVDGLRYFFLNY 240 (241)
Q Consensus 222 ~~e~p---~~~~~~l~~fl~~~ 240 (241)
+.|.+ +++.+.|.+||.++
T Consensus 308 ~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 308 LFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred hhCCcHHHHHHHHHHHHHHhhc
Confidence 99986 77889999999875
No 36
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.86 E-value=8.2e-22 Score=155.16 Aligned_cols=215 Identities=21% Similarity=0.285 Sum_probs=122.0
Q ss_pred ceEEeeCCCCCCCCCC---CCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCeEEE
Q 026228 9 FHCFAPDWLGFGFSDK---PEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAI 85 (241)
Q Consensus 9 ~~via~Dl~G~G~S~~---p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~lvl 85 (241)
|+||++|+||+|.|+. +. ...|+.+++++++..+++++++++ +.+||+ ++||.+++.+|..+|++|+++|+
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~-~~~vG~-S~Gg~~~~~~a~~~p~~v~~lvl 74 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPD----FPDYTTDDLAADLEALREALGIKK-INLVGH-SMGGMLALEYAAQYPERVKKLVL 74 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSG----SCTHCHHHHHHHHHHHHHHHTTSS-EEEEEE-THHHHHHHHHHHHSGGGEEEEEE
T ss_pred CEEEEEeCCCCCCCCCCccCC----cccccHHHHHHHHHHHHHHhCCCC-eEEEEE-CCChHHHHHHHHHCchhhcCcEE
Confidence 7999999999999984 22 235688999999999999999987 777642 25677899999999999999999
Q ss_pred ecCCC--CC---CCCcch-HHhhhccchhhh-hhhhhHHHHHHHH----hhCCCCccChhhHhhhhccccCCCCChhHHH
Q 026228 86 LNSPL--TA---SSPLPG-LFQQLRIPLLGE-FTAQNAIMAERFI----EAGSPYVLKLDKADVYRLPYLASSGPGFALL 154 (241)
Q Consensus 86 ~~~~~--~~---~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (241)
++++. .. ...... ............ ............. ...... ............+... .......
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~ 152 (230)
T PF00561_consen 75 ISPPPDLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREF-VEDFLKQFQSQQYARF-AETDAFD 152 (230)
T ss_dssp ESESSHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHT-CHHHHHH
T ss_pred EeeeccchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCcc-ccchhhccchhhhhHH-HHHHHHh
Confidence 98741 00 000000 000000000000 0000000000000 000000 0000000000000000 0000000
Q ss_pred HHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHH
Q 026228 155 EAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLR 234 (241)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~ 234 (241)
.................. ...+++|+++++|++|..+|+.....+.+.+|+ .+.++++++||+.++|+|+++++.|.
T Consensus 153 ~~~~~~~~~~~~~~~~~~--l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 153 NMFWNALGYFSVWDPSPA--LSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN-SQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHHHHHHH--HTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT-EEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred hhcccccccccccccccc--ccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CEEEECCCCChHHHhcCHHhhhhhhc
Confidence 000000000000000000 125899999999999999999999989999998 69999999999999999999999886
No 37
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.86 E-value=1.4e-20 Score=159.06 Aligned_cols=211 Identities=24% Similarity=0.334 Sum_probs=122.0
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCcCccC
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSRIS 81 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~~v~ 81 (241)
.|.. +|+|+++|+||||.|+.... .++++++++++.++++.++.++ ++++ || +||.+++.+|..+|++|+
T Consensus 153 ~l~~-~~~v~~~d~~g~G~s~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~lv--G~S~Gg~~a~~~a~~~~~~v~ 223 (371)
T PRK14875 153 ALAA-GRPVIALDLPGHGASSKAVG-----AGSLDELAAAVLAFLDALGIER-AHLV--GHSMGGAVALRLAARAPQRVA 223 (371)
T ss_pred HHhc-CCEEEEEcCCCCCCCCCCCC-----CCCHHHHHHHHHHHHHhcCCcc-EEEE--eechHHHHHHHHHHhCchhee
Confidence 3555 59999999999999975432 2478899999999999999875 6666 55 466778889999999999
Q ss_pred eEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhh-HhhhhccccCCCCChhHHHHHHHhc
Q 026228 82 KLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDK-ADVYRLPYLASSGPGFALLEAARKV 160 (241)
Q Consensus 82 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (241)
++++++++.............+.... ...........+.. .+....... ...+.... ..... .........
T Consensus 224 ~lv~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~ 295 (371)
T PRK14875 224 SLTLIAPAGLGPEINGDYIDGFVAAE---SRRELKPVLELLFA--DPALVTRQMVEDLLKYKR--LDGVD-DALRALADA 295 (371)
T ss_pred EEEEECcCCcCcccchhHHHHhhccc---chhHHHHHHHHHhc--ChhhCCHHHHHHHHHHhc--cccHH-HHHHHHHHH
Confidence 99999764321111111111100000 00000000000110 000011000 00000000 00000 000000000
Q ss_pred Ch------hhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHH
Q 026228 161 NF------KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLR 234 (241)
Q Consensus 161 ~~------~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~ 234 (241)
.+ .+....+ .++++|+|+++|++|..+|.+..+.+ .++ +++++++++||++++|+|+++++.|.
T Consensus 296 ~~~~~~~~~~~~~~l------~~i~~Pvlii~g~~D~~vp~~~~~~l---~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~ 365 (371)
T PRK14875 296 LFAGGRQRVDLRDRL------ASLAIPVLVIWGEQDRIIPAAHAQGL---PDG-VAVHVLPGAGHMPQMEAAADVNRLLA 365 (371)
T ss_pred hccCcccchhHHHHH------hcCCCCEEEEEECCCCccCHHHHhhc---cCC-CeEEEeCCCCCChhhhCHHHHHHHHH
Confidence 00 0111111 25789999999999999987665433 233 68999999999999999999999999
Q ss_pred HHHhhc
Q 026228 235 YFFLNY 240 (241)
Q Consensus 235 ~fl~~~ 240 (241)
+||+++
T Consensus 366 ~fl~~~ 371 (371)
T PRK14875 366 EFLGKA 371 (371)
T ss_pred HHhccC
Confidence 999764
No 38
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.85 E-value=7.4e-20 Score=154.71 Aligned_cols=227 Identities=15% Similarity=0.130 Sum_probs=128.0
Q ss_pred CCCceEEeeCCCCCCCCCCC-------C-----CC--CC-CC-CCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHH
Q 026228 6 DAGFHCFAPDWLGFGFSDKP-------E-----KG--YD-DF-DFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG 69 (241)
Q Consensus 6 ~~~~~via~Dl~G~G~S~~p-------~-----~~--~~-~~-~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~ 69 (241)
...|.||++|..|=|.|+.| . .+ +. .+ .++++++++++..+++++|+++..++|| +++||+++
T Consensus 97 t~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG-~SmGG~ia 175 (389)
T PRK06765 97 TNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMG-PSMGGMQA 175 (389)
T ss_pred CCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEE-ECHHHHHH
Confidence 34699999999998765433 1 00 00 12 3889999999999999999987543553 33678889
Q ss_pred HHHHhcCcCccCeEEEecCCCCCCCCc-chHHhhhc-----cchh--hhhh--h-h-hH-HHHHH----------HHhhC
Q 026228 70 LTWALKNPSRISKLAILNSPLTASSPL-PGLFQQLR-----IPLL--GEFT--A-Q-NA-IMAER----------FIEAG 126 (241)
Q Consensus 70 ~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~-----~~~~--~~~~--~-~-~~-~~~~~----------~~~~~ 126 (241)
+.+|.++|++|+++|++++........ ....+..+ -|-+ +.+. . . .. ....+ ++...
T Consensus 176 l~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~~~~~~~ai~~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~ 255 (389)
T PRK06765 176 QEWAVHYPHMVERMIGVIGNPQNDAWTSVNVLQNWAEAIRLDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETT 255 (389)
T ss_pred HHHHHHChHhhheEEEEecCCCCChhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHH
Confidence 999999999999999998753221111 11111011 0000 0000 0 0 00 00000 11000
Q ss_pred --CCCccC---------hhhHhhhhc----cccCCCCChh--HHHHHHHhcChh----hhHHhhhcCCCCCCCCCCeEEE
Q 026228 127 --SPYVLK---------LDKADVYRL----PYLASSGPGF--ALLEAARKVNFK----DISSRIGAGFSSGSWDKPVLVA 185 (241)
Q Consensus 127 --~~~~~~---------~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~P~l~i 185 (241)
...... ....+.|.. .+.....+.. .+..+....+.. +..+. ..++++|+|+|
T Consensus 256 f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~------L~~I~~PtLvI 329 (389)
T PRK06765 256 FPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEA------LSNIEANVLMI 329 (389)
T ss_pred cCcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHH------HhcCCCCEEEE
Confidence 000000 000000000 0000000000 000111111100 11111 12679999999
Q ss_pred ecCCCCCCChhHHHHHHhcCCC---ceeEEEeCC-CCCCCCCCChHHHHHHHHHHHhh
Q 026228 186 WGISDKYLPQSVAEEFQKGNPN---VVKLQMIEG-AGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 186 ~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~-agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
+|++|..+|++..+.+.+.+++ .+++++|++ +||++++|+|+++++.|.+||.+
T Consensus 330 ~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 330 PCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred EeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 9999999999888888888862 368999985 99999999999999999999965
No 39
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.85 E-value=3.2e-20 Score=180.26 Aligned_cols=221 Identities=16% Similarity=0.187 Sum_probs=125.7
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCC---CCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCcC
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKG---YDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPS 78 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~---~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~ 78 (241)
.|++ +|+||++|+||||.|+.+... .....++++.+++++.++++++++++ ++++ || +||.+++.+|.++|+
T Consensus 1393 ~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~-v~Lv--GhSmGG~iAl~~A~~~P~ 1468 (1655)
T PLN02980 1393 AISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGK-VTLV--GYSMGARIALYMALRFSD 1468 (1655)
T ss_pred HHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCC-EEEE--EECHHHHHHHHHHHhChH
Confidence 4555 599999999999999765320 00234688999999999999999875 6776 55 567789999999999
Q ss_pred ccCeEEEecCCCCCCCCcchHHhhhccchhh---hhhhh--hHHHHHHHHhhCC-CCccC-hhhHhhhhccccCCCCChh
Q 026228 79 RISKLAILNSPLTASSPLPGLFQQLRIPLLG---EFTAQ--NAIMAERFIEAGS-PYVLK-LDKADVYRLPYLASSGPGF 151 (241)
Q Consensus 79 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 151 (241)
+|+++|++++..... . .. ....+..... ..... .......++.... ..... .......+.... . ....
T Consensus 1469 ~V~~lVlis~~p~~~-~-~~-~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~ 1543 (1655)
T PLN02980 1469 KIEGAVIISGSPGLK-D-EV-ARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPHFNKIVASRLL-H-KDVP 1543 (1655)
T ss_pred hhCEEEEECCCCccC-c-hH-HHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHHHHHHHHHHHh-c-CCHH
Confidence 999999997632111 0 00 0011100000 00000 0000111110000 00000 000000000000 0 0000
Q ss_pred HHHHHHHhc---ChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCc-----------eeEEEeCCC
Q 026228 152 ALLEAARKV---NFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNV-----------VKLQMIEGA 217 (241)
Q Consensus 152 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~-----------~~~~~i~~a 217 (241)
......... ...+.... ..++++|+|+|||++|..++ .....+.+.+++. +++++|++|
T Consensus 1544 ~~~~~l~~~~~~~~~dl~~~------L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~a 1616 (1655)
T PLN02980 1544 SLAKLLSDLSIGRQPSLWED------LKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEIIEIVEIPNC 1616 (1655)
T ss_pred HHHHHHHHhhhcccchHHHH------HhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccceEEEEECCC
Confidence 000111100 00011111 12678999999999999775 4556666666651 489999999
Q ss_pred CCCCCCCChHHHHHHHHHHHhh
Q 026228 218 GHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 218 gH~~~~e~p~~~~~~l~~fl~~ 239 (241)
||++++|+|++|++.|.+||.+
T Consensus 1617 GH~~~lE~Pe~f~~~I~~FL~~ 1638 (1655)
T PLN02980 1617 GHAVHLENPLPVIRALRKFLTR 1638 (1655)
T ss_pred CCchHHHCHHHHHHHHHHHHHh
Confidence 9999999999999999999975
No 40
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.84 E-value=1.2e-19 Score=149.73 Aligned_cols=82 Identities=17% Similarity=0.181 Sum_probs=65.5
Q ss_pred CcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCeE
Q 026228 4 MSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKL 83 (241)
Q Consensus 4 L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~l 83 (241)
+...+|+||++|+||||+|+.+... ..++.+++++++..+++++++++ ++++|+ ++||.+++.++.++|++|+++
T Consensus 49 ~~~~~~~vi~~D~~G~G~S~~~~~~---~~~~~~~~~~dl~~l~~~l~~~~-~~lvG~-S~GG~ia~~~a~~~p~~v~~l 123 (306)
T TIGR01249 49 FDPETYRIVLFDQRGCGKSTPHACL---EENTTWDLVADIEKLREKLGIKN-WLVFGG-SWGSTLALAYAQTHPEVVTGL 123 (306)
T ss_pred cCccCCEEEEECCCCCCCCCCCCCc---ccCCHHHHHHHHHHHHHHcCCCC-EEEEEE-CHHHHHHHHHHHHChHhhhhh
Confidence 3345799999999999999865432 23577889999999999999876 566632 257778999999999999999
Q ss_pred EEecCCC
Q 026228 84 AILNSPL 90 (241)
Q Consensus 84 vl~~~~~ 90 (241)
|++++..
T Consensus 124 vl~~~~~ 130 (306)
T TIGR01249 124 VLRGIFL 130 (306)
T ss_pred eeecccc
Confidence 9998643
No 41
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.83 E-value=2.4e-19 Score=152.09 Aligned_cols=215 Identities=20% Similarity=0.270 Sum_probs=120.9
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC---CCeEEEEeCcc-ccHHHHHHHhcCcC
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK---YPFFLVVQGFL-VGSYGLTWALKNPS 78 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~---~~~~lv~~g~~-gG~~~~~~a~~~p~ 78 (241)
.|++.||+|+++|+||||.|+.+.. +.++++.+++|+.++++.+..+ .+++++ ||| ||.+++.++ .+|+
T Consensus 158 ~L~~~Gy~V~~~D~rGhG~S~~~~~----~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lv--GhSmGG~ial~~a-~~p~ 230 (395)
T PLN02652 158 QLTSCGFGVYAMDWIGHGGSDGLHG----YVPSLDYVVEDTEAFLEKIRSENPGVPCFLF--GHSTGGAVVLKAA-SYPS 230 (395)
T ss_pred HHHHCCCEEEEeCCCCCCCCCCCCC----CCcCHHHHHHHHHHHHHHHHHhCCCCCEEEE--EECHHHHHHHHHH-hccC
Confidence 4677899999999999999987532 2347788999999999988643 246665 554 555666554 4664
Q ss_pred ---ccCeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCC--ccChhhH---hhhhccccCCCCCh
Q 026228 79 ---RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPY--VLKLDKA---DVYRLPYLASSGPG 150 (241)
Q Consensus 79 ---~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~ 150 (241)
+|+++|+.++... ..+........ .+.... . .....+...... ....... ..+..+........
T Consensus 231 ~~~~v~glVL~sP~l~-~~~~~~~~~~~-~~l~~~-~-----~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~ 302 (395)
T PLN02652 231 IEDKLEGIVLTSPALR-VKPAHPIVGAV-APIFSL-V-----APRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIR 302 (395)
T ss_pred cccccceEEEECcccc-cccchHHHHHH-HHHHHH-h-----CCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCch
Confidence 8999988764321 11111100000 000000 0 000000000000 0000000 01111100000000
Q ss_pred hHH-HHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCC-ceeEEEeCCCCCCCCCC-ChH
Q 026228 151 FAL-LEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQED-WPE 227 (241)
Q Consensus 151 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~agH~~~~e-~p~ 227 (241)
... ....+ ..+.+... ..++++|+|++||++|.++|++.++.+.+..+. ..++++++|++|.++.| +|+
T Consensus 303 ~~~~~~~~~------~~~~l~~~--L~~I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e 374 (395)
T PLN02652 303 VRTGHEILR------ISSYLTRN--FKSVTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPERE 374 (395)
T ss_pred HHHHHHHHH------HHHHHHhh--cccCCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHH
Confidence 000 00000 01111111 237899999999999999999888887665442 35899999999999776 899
Q ss_pred HHHHHHHHHHhhc
Q 026228 228 KVVDGLRYFFLNY 240 (241)
Q Consensus 228 ~~~~~l~~fl~~~ 240 (241)
++.+.+.+||.++
T Consensus 375 ~v~~~I~~FL~~~ 387 (395)
T PLN02652 375 EVGRDIIDWMEKR 387 (395)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999764
No 42
>PLN02511 hydrolase
Probab=99.82 E-value=8.8e-20 Score=154.99 Aligned_cols=218 Identities=15% Similarity=0.126 Sum_probs=118.3
Q ss_pred CcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC---CCeEEEEeCc-cccHHHHHHHhcCcCc
Q 026228 4 MSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK---YPFFLVVQGF-LVGSYGLTWALKNPSR 79 (241)
Q Consensus 4 L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~---~~~~lv~~g~-~gG~~~~~~a~~~p~~ 79 (241)
+.+.||+||++|+||||.|....... ....+++|+.++++.++.. .++++| |+ +||.+++.++..+|++
T Consensus 125 ~~~~g~~vv~~d~rG~G~s~~~~~~~-----~~~~~~~Dl~~~i~~l~~~~~~~~~~lv--G~SlGg~i~~~yl~~~~~~ 197 (388)
T PLN02511 125 ARSKGWRVVVFNSRGCADSPVTTPQF-----YSASFTGDLRQVVDHVAGRYPSANLYAA--GWSLGANILVNYLGEEGEN 197 (388)
T ss_pred HHHCCCEEEEEecCCCCCCCCCCcCE-----EcCCchHHHHHHHHHHHHHCCCCCEEEE--EechhHHHHHHHHHhcCCC
Confidence 34569999999999999997643221 1235677888888887752 346666 55 5677889999999988
Q ss_pred --cCeEEEecCCCCCCCCcchHHhhhccchhhh-hhhhhHHHHH---HHHhhCCCCccChhhHhhhhccccCCCCChhHH
Q 026228 80 --ISKLAILNSPLTASSPLPGLFQQLRIPLLGE-FTAQNAIMAE---RFIEAGSPYVLKLDKADVYRLPYLASSGPGFAL 153 (241)
Q Consensus 80 --v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (241)
|.+++++++|.............+. ..+.. +......... ..+... +..+.... .... ......
T Consensus 198 ~~v~~~v~is~p~~l~~~~~~~~~~~~-~~y~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~--~~~~------~~~~~f 267 (388)
T PLN02511 198 CPLSGAVSLCNPFDLVIADEDFHKGFN-NVYDKALAKALRKIFAKHALLFEGL-GGEYNIPL--VANA------KTVRDF 267 (388)
T ss_pred CCceEEEEECCCcCHHHHHHHHhccHH-HHHHHHHHHHHHHHHHHHHHHHhhC-CCccCHHH--HHhC------CCHHHH
Confidence 8888888765421000000000000 00000 0000000000 000000 00000000 0000 000000
Q ss_pred HHHHH--hcChh---hhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHH-HHHHhcCCCceeEEEeCCCCCCCCCCChH
Q 026228 154 LEAAR--KVNFK---DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA-EEFQKGNPNVVKLQMIEGAGHMPQEDWPE 227 (241)
Q Consensus 154 ~~~~~--~~~~~---~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~-~~~~~~~~~~~~~~~i~~agH~~~~e~p~ 227 (241)
..... ...+. +............++++|+|+|+|++|+++|.... ..+.+.+|+ +++++++++||++++|+|+
T Consensus 268 d~~~t~~~~gf~~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~-~~l~~~~~gGH~~~~E~p~ 346 (388)
T PLN02511 268 DDGLTRVSFGFKSVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANPN-CLLIVTPSGGHLGWVAGPE 346 (388)
T ss_pred HHhhhhhcCCCCCHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCC-EEEEECCCcceeccccCCC
Confidence 00000 00111 11110000011236899999999999999987644 345667887 6999999999999999998
Q ss_pred H------HHHHHHHHHhh
Q 026228 228 K------VVDGLRYFFLN 239 (241)
Q Consensus 228 ~------~~~~l~~fl~~ 239 (241)
. +++.+.+||..
T Consensus 347 ~~~~~~w~~~~i~~Fl~~ 364 (388)
T PLN02511 347 APFGAPWTDPVVMEFLEA 364 (388)
T ss_pred CCCCCccHHHHHHHHHHH
Confidence 7 48999999975
No 43
>PRK05855 short chain dehydrogenase; Validated
Probab=99.81 E-value=1.5e-19 Score=161.27 Aligned_cols=226 Identities=16% Similarity=0.173 Sum_probs=119.2
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCcc-ccHHHHHHHhc--CcC
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFL-VGSYGLTWALK--NPS 78 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~-gG~~~~~~a~~--~p~ 78 (241)
+.|+ .+|+||++|+||||.|+++... ..|+++++++|+.+++++++.+++++++ ||| ||.+++.++.. .|+
T Consensus 46 ~~L~-~~~~Vi~~D~~G~G~S~~~~~~---~~~~~~~~a~dl~~~i~~l~~~~~~~lv--GhS~Gg~~a~~~a~~~~~~~ 119 (582)
T PRK05855 46 PLLA-DRFRVVAYDVRGAGRSSAPKRT---AAYTLARLADDFAAVIDAVSPDRPVHLL--AHDWGSIQGWEAVTRPRAAG 119 (582)
T ss_pred HHhh-cceEEEEecCCCCCCCCCCCcc---cccCHHHHHHHHHHHHHHhCCCCcEEEE--ecChHHHHHHHHHhCccchh
Confidence 3564 4799999999999999876532 2468899999999999999987767777 554 45556666554 456
Q ss_pred ccCeEEEecCCCCCCCCcchHHhh-hc--cc-hhhhhhhh-hHHHHHHHHhh-CCCC-----ccChhhHhhhhccccCCC
Q 026228 79 RISKLAILNSPLTASSPLPGLFQQ-LR--IP-LLGEFTAQ-NAIMAERFIEA-GSPY-----VLKLDKADVYRLPYLASS 147 (241)
Q Consensus 79 ~v~~lvl~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~~~-~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~ 147 (241)
++..++.++.+.... ....... .. .+ ........ .......+... ..+. ............. ....
T Consensus 120 ~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 196 (582)
T PRK05855 120 RIASFTSVSGPSLDH--VGFWLRSGLRRPTPRRLARALGQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRV-EGTP 196 (582)
T ss_pred hhhhheeccCCchHH--HHHHHhhcccccchhhhhHHHHHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhc-cCCC
Confidence 666666555432100 0000000 00 00 00000000 00000000000 0000 0000000000000 0000
Q ss_pred CChhHHHHHHH--hcChh----hhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCC
Q 026228 148 GPGFALLEAAR--KVNFK----DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMP 221 (241)
Q Consensus 148 ~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~ 221 (241)
........... ..... ........ .....+++|+|+|+|++|+.+|+.....+.+..++ .++++++ +||++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~-~~~~~~~-~gH~~ 273 (582)
T PRK05855 197 VDPIPTQTTLSDGAHGVKLYRANMIRSLSR-PRERYTDVPVQLIVPTGDPYVRPALYDDLSRWVPR-LWRREIK-AGHWL 273 (582)
T ss_pred cchhhhhhhhccccchHHHHHhhhhhhhcc-CccCCccCceEEEEeCCCcccCHHHhccccccCCc-ceEEEcc-CCCcc
Confidence 00000000000 00000 00000000 01224789999999999999998888888887877 5787776 79999
Q ss_pred CCCChHHHHHHHHHHHhh
Q 026228 222 QEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 222 ~~e~p~~~~~~l~~fl~~ 239 (241)
+.|+|+++++.|.+|+..
T Consensus 274 ~~e~p~~~~~~i~~fl~~ 291 (582)
T PRK05855 274 PMSHPQVLAAAVAEFVDA 291 (582)
T ss_pred hhhChhHHHHHHHHHHHh
Confidence 999999999999999975
No 44
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.80 E-value=4e-18 Score=139.50 Aligned_cols=226 Identities=21% Similarity=0.305 Sum_probs=123.8
Q ss_pred CCCcCCCceEEeeCCCCCCCCC-CCCCCCCCCCCCHHHHHHHHHHHHHHcCC---CCCeEEEEeCccccHHHHHHHhcCc
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSD-KPEKGYDDFDFTENEFHEELDKLLDVLEV---KYPFFLVVQGFLVGSYGLTWALKNP 77 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~-~p~~~~~~~~~~~~~~a~~l~~~l~~l~~---~~~~~lv~~g~~gG~~~~~~a~~~p 77 (241)
..|++.||.|+++|+||||.|. .... ..-++.++.+|+.++++.... +.+++++||+ |||.+++.++.+++
T Consensus 55 ~~l~~~G~~V~~~D~RGhG~S~r~~rg----~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHS-mGg~Ia~~~~~~~~ 129 (298)
T COG2267 55 DDLAARGFDVYALDLRGHGRSPRGQRG----HVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHS-MGGLIALLYLARYP 129 (298)
T ss_pred HHHHhCCCEEEEecCCCCCCCCCCCcC----CchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeC-cHHHHHHHHHHhCC
Confidence 3577889999999999999997 3332 223578999999999998863 3567777432 67778999999999
Q ss_pred CccCeEEEecCCCCCCC-CcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhh--Hhhhh-ccccCCCCChhHH
Q 026228 78 SRISKLAILNSPLTASS-PLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDK--ADVYR-LPYLASSGPGFAL 153 (241)
Q Consensus 78 ~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~ 153 (241)
.+|+++||.++...... ..............+.......... ..........++... .+.|. .+......+....
T Consensus 130 ~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w 208 (298)
T COG2267 130 PRIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDS-NLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRW 208 (298)
T ss_pred ccccEEEEECccccCChhHHHHHHHHHhcccccccccccccCc-ccccCcCcchhhcCHHHHHHHhcCCccccCCccHHH
Confidence 99999988865332211 0000000000000000000000000 000000001111111 11111 1111111111111
Q ss_pred HHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCC-hhHHHHHHhc--CCCceeEEEeCCCCCCCCCCCh---H
Q 026228 154 LEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP-QSVAEEFQKG--NPNVVKLQMIEGAGHMPQEDWP---E 227 (241)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~-~~~~~~~~~~--~~~~~~~~~i~~agH~~~~e~p---~ 227 (241)
+....... . ........++++|+|+++|++|++++ .+...++.+. .++ .++++|+|+.|.++.|.+ +
T Consensus 209 ~~~~~~a~-----~-~~~~~~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~-~~~~~~~g~~He~~~E~~~~r~ 281 (298)
T COG2267 209 VDLALLAG-----R-VPALRDAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPD-KELKVIPGAYHELLNEPDRARE 281 (298)
T ss_pred HHHHHHhh-----c-ccchhccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCC-ceEEecCCcchhhhcCcchHHH
Confidence 11110000 0 00011123679999999999999998 5555444433 333 589999999999986654 6
Q ss_pred HHHHHHHHHHhhc
Q 026228 228 KVVDGLRYFFLNY 240 (241)
Q Consensus 228 ~~~~~l~~fl~~~ 240 (241)
++.+.+.+||.++
T Consensus 282 ~~~~~~~~~l~~~ 294 (298)
T COG2267 282 EVLKDILAWLAEA 294 (298)
T ss_pred HHHHHHHHHHHhh
Confidence 8999999998765
No 45
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.79 E-value=5.8e-18 Score=135.77 Aligned_cols=216 Identities=20% Similarity=0.283 Sum_probs=124.1
Q ss_pred CceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC---CCCeEEEEeCc-ccc-HHHHHHHhcCcCccCe
Q 026228 8 GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV---KYPFFLVVQGF-LVG-SYGLTWALKNPSRISK 82 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~---~~~~~lv~~g~-~gG-~~~~~~a~~~p~~v~~ 82 (241)
+.+||++|+|-||.|.+... ++.+.+++|+..|++..+. ..+..++ || +|| -+++..++.+|+.+.+
T Consensus 80 ~~~v~~vd~RnHG~Sp~~~~------h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~--GHsmGG~~~~m~~t~~~p~~~~r 151 (315)
T KOG2382|consen 80 GRDVYAVDVRNHGSSPKITV------HNYEAMAEDVKLFIDGVGGSTRLDPVVLL--GHSMGGVKVAMAETLKKPDLIER 151 (315)
T ss_pred cCceEEEecccCCCCccccc------cCHHHHHHHHHHHHHHcccccccCCceec--ccCcchHHHHHHHHHhcCcccce
Confidence 45899999999999987542 2458899999999999862 3445665 55 455 3456678899999999
Q ss_pred EEEecCCCCCCCCcc----hHHhhhcc-chhhhhhhhhHHHHHHHHhhCCCCc--------cChhhHhhhhccccCCCCC
Q 026228 83 LAILNSPLTASSPLP----GLFQQLRI-PLLGEFTAQNAIMAERFIEAGSPYV--------LKLDKADVYRLPYLASSGP 149 (241)
Q Consensus 83 lvl~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~ 149 (241)
+++++.......... ..+.+++. +.............+.+........ ++....+ ....|......
T Consensus 152 liv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~fi~~nl~~~~~~-~s~~w~~nl~~ 230 (315)
T KOG2382|consen 152 LIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQFILTNLKKSPSD-GSFLWRVNLDS 230 (315)
T ss_pred eEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHHHHHHhcCcCCCC-CceEEEeCHHH
Confidence 999986331111111 11212111 1000000000011111111100000 0000000 00000000000
Q ss_pred hhHHHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHH
Q 026228 150 GFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKV 229 (241)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~ 229 (241)
-...+..+...+... . +.....+.|||++.|.++..++.+....+.+.+|. ++++++++||||+|.|+|++|
T Consensus 231 i~~~~~~~~~~s~~~---~----l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~-~e~~~ld~aGHwVh~E~P~~~ 302 (315)
T KOG2382|consen 231 IASLLDEYEILSYWA---D----LEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPN-VEVHELDEAGHWVHLEKPEEF 302 (315)
T ss_pred HHHHHHHHHhhcccc---c----ccccccccceeEEecCCCCCcChhHHHHHHHhccc-hheeecccCCceeecCCHHHH
Confidence 000111111111111 1 11125678999999999999999888889999998 799999999999999999999
Q ss_pred HHHHHHHHhhc
Q 026228 230 VDGLRYFFLNY 240 (241)
Q Consensus 230 ~~~l~~fl~~~ 240 (241)
.++|.+|+.+.
T Consensus 303 ~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 303 IESISEFLEEP 313 (315)
T ss_pred HHHHHHHhccc
Confidence 99999998764
No 46
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.78 E-value=1.4e-17 Score=138.87 Aligned_cols=221 Identities=15% Similarity=0.182 Sum_probs=118.8
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-----------------------CCCeEE
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV-----------------------KYPFFL 58 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~-----------------------~~~~~l 58 (241)
+.|.+.||+|+++|+||||+|+...... .+..+++++++|+.++++.... +.++++
T Consensus 68 ~~l~~~G~~V~~~D~rGHG~S~~~~~~~-g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l 146 (332)
T TIGR01607 68 ENFNKNGYSVYGLDLQGHGESDGLQNLR-GHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYI 146 (332)
T ss_pred HHHHHCCCcEEEecccccCCCccccccc-cchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeE
Confidence 3577889999999999999998642211 1123678999999999987531 245666
Q ss_pred EEeCc-cccHHHHHHHhcCcC--------ccCeEEEecCCCCCCC-Ccc--hHHhhhccchhhhhhhhhHHHHHHHHhhC
Q 026228 59 VVQGF-LVGSYGLTWALKNPS--------RISKLAILNSPLTASS-PLP--GLFQQLRIPLLGEFTAQNAIMAERFIEAG 126 (241)
Q Consensus 59 v~~g~-~gG~~~~~~a~~~p~--------~v~~lvl~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (241)
+ || |||.++..++..+++ .++++|+++++..... ..+ ........+.+. . ..++....
T Consensus 147 ~--GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~-~-------~~~~~p~~ 216 (332)
T TIGR01607 147 I--GLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMN-F-------MSRVFPTF 216 (332)
T ss_pred e--eccCccHHHHHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHH-H-------HHHHCCcc
Confidence 6 55 566678777765542 5889887775431100 000 000000000000 0 00111000
Q ss_pred ---CCCccCh--hhHh-hhhccccCCCCChhHHHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHH
Q 026228 127 ---SPYVLKL--DKAD-VYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEE 200 (241)
Q Consensus 127 ---~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~ 200 (241)
....+.. ...+ ....++.............+.. ....+.........++|+|+|+|++|.+++++....
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~Dp~~~~~~~s~~~~~~l~~-----~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~ 291 (332)
T TIGR01607 217 RISKKIRYEKSPYVNDIIKFDKFRYDGGITFNLASELIK-----ATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVS 291 (332)
T ss_pred cccCccccccChhhhhHHhcCccccCCcccHHHHHHHHH-----HHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHH
Confidence 0000000 0001 1111111000000111111100 000111111101227999999999999999888877
Q ss_pred HHhcC--CCceeEEEeCCCCCCCCCCC-hHHHHHHHHHHHhh
Q 026228 201 FQKGN--PNVVKLQMIEGAGHMPQEDW-PEKVVDGLRYFFLN 239 (241)
Q Consensus 201 ~~~~~--~~~~~~~~i~~agH~~~~e~-p~~~~~~l~~fl~~ 239 (241)
+.+.. ++ .+++++++++|.++.|. ++++.+.+.+||..
T Consensus 292 ~~~~~~~~~-~~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 292 FYNKLSISN-KELHTLEDMDHVITIEPGNEEVLKKIIEWISN 332 (332)
T ss_pred HHHhccCCC-cEEEEECCCCCCCccCCCHHHHHHHHHHHhhC
Confidence 76543 34 58999999999999885 79999999999863
No 47
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.76 E-value=1.7e-18 Score=128.81 Aligned_cols=201 Identities=16% Similarity=0.188 Sum_probs=120.3
Q ss_pred ceEEeeCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHcCCCCCeEEEEeCccccHH-HHHHHhcCcCccCeEEEe
Q 026228 9 FHCFAPDWLGFGFSDKPEKGYDDFDFT-ENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAIL 86 (241)
Q Consensus 9 ~~via~Dl~G~G~S~~p~~~~~~~~~~-~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~-~~~~a~~~p~~v~~lvl~ 86 (241)
++||++|-||||.|-.|..-+ ... +..=+++..++|++|..++ +.+. |||-|++ ++..|+++++.|.++++.
T Consensus 72 ~TivawDPpGYG~SrPP~Rkf---~~~ff~~Da~~avdLM~aLk~~~-fsvl--GWSdGgiTalivAak~~e~v~rmiiw 145 (277)
T KOG2984|consen 72 VTIVAWDPPGYGTSRPPERKF---EVQFFMKDAEYAVDLMEALKLEP-FSVL--GWSDGGITALIVAAKGKEKVNRMIIW 145 (277)
T ss_pred eEEEEECCCCCCCCCCCcccc---hHHHHHHhHHHHHHHHHHhCCCC-eeEe--eecCCCeEEEEeeccChhhhhhheee
Confidence 899999999999996654321 111 2344778889999999986 4444 8976665 667789999999999998
Q ss_pred cCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHHhc-Chhhh
Q 026228 87 NSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKV-NFKDI 165 (241)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 165 (241)
.+...-.......+.-+| + ...+...++ ++.++.|-..++.... .+..+.++.. ++.+-
T Consensus 146 ga~ayvn~~~~ma~kgiR-----d--------v~kWs~r~R-----~P~e~~Yg~e~f~~~w--a~wvD~v~qf~~~~dG 205 (277)
T KOG2984|consen 146 GAAAYVNHLGAMAFKGIR-----D--------VNKWSARGR-----QPYEDHYGPETFRTQW--AAWVDVVDQFHSFCDG 205 (277)
T ss_pred cccceecchhHHHHhchH-----H--------Hhhhhhhhc-----chHHHhcCHHHHHHHH--HHHHHHHHHHhhcCCC
Confidence 764211000000011010 0 011110000 0111111000000000 0011111110 11100
Q ss_pred HHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHhh
Q 026228 166 SSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 166 ~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
++.+ ....+++||+|+++|+.|+.++...+-.+....+. +++++.|..+|..|+--|++||..+.+||++
T Consensus 206 --~fCr-~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~-a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 206 --RFCR-LVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSL-AKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred --chHh-hhcccccCCeeEeeCCcCCCCCCCCccchhhhccc-ceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 0000 11237899999999999999977767777777888 6999999999999999999999999999975
No 48
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.76 E-value=5.3e-17 Score=138.78 Aligned_cols=192 Identities=17% Similarity=0.219 Sum_probs=118.0
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc---CCCCCeEEEEeCc-cccHHHHHHHhcCcC
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL---EVKYPFFLVVQGF-LVGSYGLTWALKNPS 78 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l---~~~~~~~lv~~g~-~gG~~~~~~a~~~p~ 78 (241)
.|+++||+|+++|+||||+|...... .+...+.+.+.+++... +.+ ++.++ |+ +||.+++.+|..+|+
T Consensus 217 ~La~~Gy~vl~~D~pG~G~s~~~~~~-----~d~~~~~~avld~l~~~~~vd~~-ri~l~--G~S~GG~~Al~~A~~~p~ 288 (414)
T PRK05077 217 YLAPRGIAMLTIDMPSVGFSSKWKLT-----QDSSLLHQAVLNALPNVPWVDHT-RVAAF--GFRFGANVAVRLAYLEPP 288 (414)
T ss_pred HHHhCCCEEEEECCCCCCCCCCCCcc-----ccHHHHHHHHHHHHHhCcccCcc-cEEEE--EEChHHHHHHHHHHhCCc
Confidence 57788999999999999999753211 13344556777777665 334 45665 55 567788899999999
Q ss_pred ccCeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHH
Q 026228 79 RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAAR 158 (241)
Q Consensus 79 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (241)
+|+++|+++++.......+.... ..+.. . ...+..++ +... .. . + .+.....
T Consensus 289 ri~a~V~~~~~~~~~~~~~~~~~--~~p~~----~-~~~la~~l---g~~~-~~--~-~--------------~l~~~l~ 340 (414)
T PRK05077 289 RLKAVACLGPVVHTLLTDPKRQQ--QVPEM----Y-LDVLASRL---GMHD-AS--D-E--------------ALRVELN 340 (414)
T ss_pred CceEEEEECCccchhhcchhhhh--hchHH----H-HHHHHHHh---CCCC-CC--h-H--------------HHHHHhh
Confidence 99999999765421111011110 00000 0 00000100 0000 00 0 0 0001111
Q ss_pred hcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 159 KVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
....+. ... + ..++++|+|+|||++|+++|++..+.+.+..++ .+++++|++ ++.|.|+++++.+.+||+
T Consensus 341 ~~sl~~--~~~---l-~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~~-~~l~~i~~~---~~~e~~~~~~~~i~~wL~ 410 (414)
T PRK05077 341 RYSLKV--QGL---L-GRRCPTPMLSGYWKNDPFSPEEDSRLIASSSAD-GKLLEIPFK---PVYRNFDKALQEISDWLE 410 (414)
T ss_pred hccchh--hhh---h-ccCCCCcEEEEecCCCCCCCHHHHHHHHHhCCC-CeEEEccCC---CccCCHHHHHHHHHHHHH
Confidence 111100 000 0 126789999999999999999999988888887 599999997 677899999999999998
Q ss_pred hc
Q 026228 239 NY 240 (241)
Q Consensus 239 ~~ 240 (241)
++
T Consensus 411 ~~ 412 (414)
T PRK05077 411 DR 412 (414)
T ss_pred HH
Confidence 65
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.74 E-value=3.8e-17 Score=132.82 Aligned_cols=207 Identities=18% Similarity=0.257 Sum_probs=109.1
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-----CCCCCeEEEEeCcc-ccHHHHHHHhc
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL-----EVKYPFFLVVQGFL-VGSYGLTWALK 75 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l-----~~~~~~~lv~~g~~-gG~~~~~~a~~ 75 (241)
+.|+++||+|+++|+||||+|+... ++.+++.+|+.++++.+ ++++ ++++ ||| ||.+++.+|.
T Consensus 51 ~~l~~~G~~v~~~Dl~G~G~S~~~~-------~~~~~~~~d~~~~~~~l~~~~~g~~~-i~l~--G~S~Gg~~a~~~a~- 119 (274)
T TIGR03100 51 RRLAEAGFPVLRFDYRGMGDSEGEN-------LGFEGIDADIAAAIDAFREAAPHLRR-IVAW--GLCDAASAALLYAP- 119 (274)
T ss_pred HHHHHCCCEEEEeCCCCCCCCCCCC-------CCHHHHHHHHHHHHHHHHhhCCCCCc-EEEE--EECHHHHHHHHHhh-
Confidence 3567789999999999999997532 24466777888777776 4544 5555 554 4555666655
Q ss_pred CcCccCeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhh--ccccCCCCChhHH
Q 026228 76 NPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYR--LPYLASSGPGFAL 153 (241)
Q Consensus 76 ~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 153 (241)
.+++|+++|+++++........ ....+..+..... .....++++. + .+.+......+.. ..+... ......
T Consensus 120 ~~~~v~~lil~~p~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~-g-~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 192 (274)
T TIGR03100 120 ADLRVAGLVLLNPWVRTEAAQA--ASRIRHYYLGQLL--SADFWRKLLS-G-EVNLGSSLRGLGDALLKARQK-GDEVAH 192 (274)
T ss_pred hCCCccEEEEECCccCCcccch--HHHHHHHHHHHHh--ChHHHHHhcC-C-CccHHHHHHHHHHHHHhhhhc-CCCccc
Confidence 4678999999986432111100 0001100000000 0000011110 0 0000000000000 000000 000000
Q ss_pred HHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHH------HHHHhcC--CCceeEEEeCCCCCCCC-CC
Q 026228 154 LEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA------EEFQKGN--PNVVKLQMIEGAGHMPQ-ED 224 (241)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~------~~~~~~~--~~~~~~~~i~~agH~~~-~e 224 (241)
.. ..++..+.+. ++++|+|++||++|...+ ... ..+.+.+ ++ ++++.+++++|++. .+
T Consensus 193 ~~-----~~~~~~~~l~------~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~~~l~~~~-v~~~~~~~~~H~l~~e~ 259 (274)
T TIGR03100 193 GG-----LAERMKAGLE------RFQGPVLFILSGNDLTAQ-EFADSVLGEPAWRGALEDPG-IERVEIDGADHTFSDRV 259 (274)
T ss_pred ch-----HHHHHHHHHH------hcCCcEEEEEcCcchhHH-HHHHHhccChhhHHHhhcCC-eEEEecCCCCcccccHH
Confidence 00 0011111221 468999999999998763 232 3344433 66 79999999999995 55
Q ss_pred ChHHHHHHHHHHHhh
Q 026228 225 WPEKVVDGLRYFFLN 239 (241)
Q Consensus 225 ~p~~~~~~l~~fl~~ 239 (241)
.++++++.|.+||.+
T Consensus 260 ~~~~v~~~i~~wL~~ 274 (274)
T TIGR03100 260 WREWVAARTTEWLRR 274 (274)
T ss_pred HHHHHHHHHHHHHhC
Confidence 559999999999963
No 50
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.72 E-value=1.5e-16 Score=126.04 Aligned_cols=217 Identities=20% Similarity=0.272 Sum_probs=129.3
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-----CCCeEEEEeCc-cccHHHHHHHhc
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV-----KYPFFLVVQGF-LVGSYGLTWALK 75 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~-----~~~~~lv~~g~-~gG~~~~~~a~~ 75 (241)
..|+..||-|+++|.+|||.|+.-. .+--+++..++|+..+.+..-. +.+.+|. |+ |||++++.+++.
T Consensus 76 ~~l~~~g~~v~a~D~~GhG~SdGl~----~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~--GeSMGGAV~Ll~~~k 149 (313)
T KOG1455|consen 76 KRLAKSGFAVYAIDYEGHGRSDGLH----AYVPSFDLVVDDVISFFDSIKEREENKGLPRFLF--GESMGGAVALLIALK 149 (313)
T ss_pred HHHHhCCCeEEEeeccCCCcCCCCc----ccCCcHHHHHHHHHHHHHHHhhccccCCCCeeee--ecCcchHHHHHHHhh
Confidence 3578889999999999999999644 2344778899999999885321 2344566 45 788899999999
Q ss_pred CcCccCeEEEecCCCCC---CCCcchHHhhhccchhhhhhhhhHHHHHHHH--hhC--CCCccChh-h-HhhhhccccCC
Q 026228 76 NPSRISKLAILNSPLTA---SSPLPGLFQQLRIPLLGEFTAQNAIMAERFI--EAG--SPYVLKLD-K-ADVYRLPYLAS 146 (241)
Q Consensus 76 ~p~~v~~lvl~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~-~-~~~~~~~~~~~ 146 (241)
.|+...++|++++.... ..+.|-....+ +.+..+. ++ +. ... .....++. . ...+..++.-.
T Consensus 150 ~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l--~~l~~li------P~-wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~ 220 (313)
T KOG1455|consen 150 DPNFWDGAILVAPMCKISEDTKPHPPVISIL--TLLSKLI------PT-WKIVPTKDIIDVAFKDPEKRKILRSDPLCYT 220 (313)
T ss_pred CCcccccceeeecccccCCccCCCcHHHHHH--HHHHHhC------Cc-eeecCCccccccccCCHHHHHHhhcCCceec
Confidence 99999999998753211 11211111000 0000000 00 00 000 00001111 1 11111222112
Q ss_pred CCChh-HHHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCC-CceeEEEeCCCCCCCCC-
Q 026228 147 SGPGF-ALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNP-NVVKLQMIEGAGHMPQE- 223 (241)
Q Consensus 147 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~agH~~~~- 223 (241)
..++. ..++.++.. .++.+++ +++++|.+++||++|.+..+..++.+-+..+ ...++.+|||.-|.++.
T Consensus 221 g~pRl~T~~ElLr~~--~~le~~l------~~vtvPflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~g 292 (313)
T KOG1455|consen 221 GKPRLKTAYELLRVT--ADLEKNL------NEVTVPFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSG 292 (313)
T ss_pred CCccHHHHHHHHHHH--HHHHHhc------ccccccEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcC
Confidence 22221 122222221 1222221 2789999999999999998888888776544 34699999999999884
Q ss_pred ---CChHHHHHHHHHHHhhcC
Q 026228 224 ---DWPEKVVDGLRYFFLNYT 241 (241)
Q Consensus 224 ---e~p~~~~~~l~~fl~~~~ 241 (241)
|+-+.|...|.+||.+++
T Consensus 293 E~~en~e~Vf~DI~~Wl~~r~ 313 (313)
T KOG1455|consen 293 EPDENVEIVFGDIISWLDERV 313 (313)
T ss_pred CCchhHHHHHHHHHHHHHhcC
Confidence 566778888999998753
No 51
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.71 E-value=2.2e-16 Score=137.47 Aligned_cols=219 Identities=17% Similarity=0.168 Sum_probs=116.9
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHH---H-HHHhcC
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYG---L-TWALKN 76 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~---~-~~a~~~ 76 (241)
+.|.++||+|+++|++|+|.|.+... . .+|..+.+.+.|..+++.+|.++ ++++ || +||.++ + .+++.+
T Consensus 214 ~~L~~qGf~V~~iDwrgpg~s~~~~~-~--ddY~~~~i~~al~~v~~~~g~~k-v~lv--G~cmGGtl~a~ala~~aa~~ 287 (532)
T TIGR01838 214 RWLVEQGHTVFVISWRNPDASQADKT-F--DDYIRDGVIAALEVVEAITGEKQ-VNCV--GYCIGGTLLSTALAYLAARG 287 (532)
T ss_pred HHHHHCCcEEEEEECCCCCcccccCC-h--hhhHHHHHHHHHHHHHHhcCCCC-eEEE--EECcCcHHHHHHHHHHHHhC
Confidence 35777899999999999999876432 1 14555667788888888888875 6666 56 566553 2 345555
Q ss_pred -cCccCeEEEecCCCCCCCCcc-hHHhhh-ccchhhhhhh-----hhHHHHHHHHhhCCC----------CccChh--hH
Q 026228 77 -PSRISKLAILNSPLTASSPLP-GLFQQL-RIPLLGEFTA-----QNAIMAERFIEAGSP----------YVLKLD--KA 136 (241)
Q Consensus 77 -p~~v~~lvl~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~-----~~~~~~~~~~~~~~~----------~~~~~~--~~ 136 (241)
|++|+++++++++.....+.. +.+... ....+..... ....+...|.-.... ++.... .-
T Consensus 288 ~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~f 367 (532)
T TIGR01838 288 DDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPF 367 (532)
T ss_pred CCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccch
Confidence 889999999998753221111 000000 0000000000 000000000000000 000000 00
Q ss_pred hhhhccccCCCCChhHHHHHHHhcChhhhHH--hh---hcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeE
Q 026228 137 DVYRLPYLASSGPGFALLEAARKVNFKDISS--RI---GAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKL 211 (241)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~ 211 (241)
+..........-++....+.++..-..+.+. .+ .......++++|+|+|+|++|.++|++.+..+.+.+++ .+.
T Consensus 368 dll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~-~~~ 446 (532)
T TIGR01838 368 DLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGG-PKT 446 (532)
T ss_pred hHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCC-CEE
Confidence 0000000111112211112221111111110 00 00112347899999999999999999988888888997 588
Q ss_pred EEeCCCCCCCCCCChH
Q 026228 212 QMIEGAGHMPQEDWPE 227 (241)
Q Consensus 212 ~~i~~agH~~~~e~p~ 227 (241)
.+++++||++++|+|.
T Consensus 447 ~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 447 FVLGESGHIAGVVNPP 462 (532)
T ss_pred EEECCCCCchHhhCCC
Confidence 8999999999999985
No 52
>PRK10985 putative hydrolase; Provisional
Probab=99.69 E-value=1e-15 Score=127.42 Aligned_cols=48 Identities=25% Similarity=0.353 Sum_probs=42.2
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCC
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDW 225 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~ 225 (241)
++++|+++|+|++|++++++....+.+..++ +++++++++||++++|.
T Consensus 253 ~i~~P~lii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 253 QIRKPTLIIHAKDDPFMTHEVIPKPESLPPN-VEYQLTEHGGHVGFVGG 300 (324)
T ss_pred CCCCCEEEEecCCCCCCChhhChHHHHhCCC-eEEEECCCCCceeeCCC
Confidence 6789999999999999988777777677776 68999999999999985
No 53
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.65 E-value=7.1e-15 Score=116.36 Aligned_cols=220 Identities=23% Similarity=0.308 Sum_probs=114.7
Q ss_pred ceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCeEEEecC
Q 026228 9 FHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNS 88 (241)
Q Consensus 9 ~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~lvl~~~ 88 (241)
|+|+++|+||||.|. .. .++...+++++..+++.+++++ ++++||+ +||.+++.++.++|+++++++++++
T Consensus 51 ~~~~~~d~~g~g~s~-~~------~~~~~~~~~~~~~~~~~~~~~~-~~l~G~S-~Gg~~~~~~~~~~p~~~~~~v~~~~ 121 (282)
T COG0596 51 YRVIAPDLRGHGRSD-PA------GYSLSAYADDLAALLDALGLEK-VVLVGHS-MGGAVALALALRHPDRVRGLVLIGP 121 (282)
T ss_pred eEEEEecccCCCCCC-cc------cccHHHHHHHHHHHHHHhCCCc-eEEEEec-ccHHHHHHHHHhcchhhheeeEecC
Confidence 899999999999997 11 1234556999999999999886 6666433 4667788999999999999999987
Q ss_pred CCCCCCCcchHH-hhhcc--chhhhhhhhh-HHHHHHHHhhCC-CCccChhhHhhhhccccCCCCChhH--HHHHHHhcC
Q 026228 89 PLTASSPLPGLF-QQLRI--PLLGEFTAQN-AIMAERFIEAGS-PYVLKLDKADVYRLPYLASSGPGFA--LLEAARKVN 161 (241)
Q Consensus 89 ~~~~~~~~~~~~-~~~~~--~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 161 (241)
+........... ..... .......... ............ ......... ............... .........
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (282)
T COG0596 122 APPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAAR-AGLAEALRAPLLGAAAAAFARAARAD 200 (282)
T ss_pred CCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccch-hccccccccccchhHhhhhhhhcccc
Confidence 532100000000 00000 0000000000 000000000000 000000000 000000000000000 000000000
Q ss_pred hhhhHHhhhc---CCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 162 FKDISSRIGA---GFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 162 ~~~~~~~~~~---~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
.......... ......+++|+++++|+.|...|......+.+..+...++++++++||+++.|+|+.+++.+.+|+.
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~~~ 280 (282)
T COG0596 201 LAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAFLE 280 (282)
T ss_pred cchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHHHh
Confidence 0000000000 0112356899999999999666655456666667642489999999999999999999999999554
No 54
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.63 E-value=2.7e-15 Score=126.13 Aligned_cols=63 Identities=11% Similarity=0.140 Sum_probs=51.7
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCC-ceeEEEeCCCCCCCCCCC---hHHHHHHHHHHHhhc
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDW---PEKVVDGLRYFFLNY 240 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~agH~~~~e~---p~~~~~~l~~fl~~~ 240 (241)
++++|+++++|++|.++|++....+.+.++. ..++++++ +||...... ++++...|.+||.++
T Consensus 284 ~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~-~gH~~~~~~~~~~~~v~~~i~~wl~~~ 350 (350)
T TIGR01836 284 NIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFP-GGHIGIYVSGKAQKEVPPAIGKWLQAR 350 (350)
T ss_pred hCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcC-CCCEEEEECchhHhhhhHHHHHHHHhC
Confidence 6789999999999999999888888887764 24667776 799987654 489999999999764
No 55
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.59 E-value=1.1e-13 Score=108.95 Aligned_cols=225 Identities=21% Similarity=0.269 Sum_probs=120.1
Q ss_pred CCCcCCCceEEeeCCCCCCCC--CCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccH-HHHHHHhcCcC
Q 026228 2 SQMSDAGFHCFAPDWLGFGFS--DKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPS 78 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S--~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~-~~~~~a~~~p~ 78 (241)
..+.++ |.|+-+|-||+=.- .-|. .| .+ .|.+++|++|..+++.++++. ++-+ |--.|+ +-.++|+.||+
T Consensus 73 ~ei~~~-fcv~HV~~PGqe~gAp~~p~-~y-~y-Psmd~LAd~l~~VL~~f~lk~-vIg~--GvGAGAyIL~rFAl~hp~ 145 (326)
T KOG2931|consen 73 AEILEH-FCVYHVDAPGQEDGAPSFPE-GY-PY-PSMDDLADMLPEVLDHFGLKS-VIGM--GVGAGAYILARFALNHPE 145 (326)
T ss_pred HHHHhh-eEEEecCCCccccCCccCCC-CC-CC-CCHHHHHHHHHHHHHhcCcce-EEEe--cccccHHHHHHHHhcChh
Confidence 345564 99999999999543 2222 22 22 378999999999999999974 4333 431244 45689999999
Q ss_pred ccCeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHH-HHhhCCCCccChhhH---hhhhccccCCCCCh-hH-
Q 026228 79 RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAER-FIEAGSPYVLKLDKA---DVYRLPYLASSGPG-FA- 152 (241)
Q Consensus 79 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~- 152 (241)
||-+|||+|.-.....+.......+-...+.. .........- +++......... +. ..|+..+.....+. ..
T Consensus 146 rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~~-~Gmt~~~~d~ll~H~Fg~e~~~~-~~diVq~Yr~~l~~~~N~~Nl~~ 223 (326)
T KOG2931|consen 146 RVLGLVLINCDPCAKGWIEWAYNKVSSNLLYY-YGMTQGVKDYLLAHHFGKEELGN-NSDIVQEYRQHLGERLNPKNLAL 223 (326)
T ss_pred heeEEEEEecCCCCchHHHHHHHHHHHHHHHh-hchhhhHHHHHHHHHhccccccc-cHHHHHHHHHHHHhcCChhHHHH
Confidence 99999999974332211111111110000000 0000000000 111111111111 11 22222221111111 11
Q ss_pred HHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHH
Q 026228 153 LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDG 232 (241)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~ 232 (241)
...++.. .+|+-. ...-....++||+|++.|++.+.... +.+--.++-|....+..+.+||-.+++|+|+++++.
T Consensus 224 fl~ayn~--R~DL~~--~r~~~~~tlkc~vllvvGd~Sp~~~~-vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea 298 (326)
T KOG2931|consen 224 FLNAYNG--RRDLSI--ERPKLGTTLKCPVLLVVGDNSPHVSA-VVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEA 298 (326)
T ss_pred HHHHhcC--CCCccc--cCCCcCccccccEEEEecCCCchhhh-hhhhhcccCcccceEEEEcccCCcccccCchHHHHH
Confidence 1122111 111111 11001114679999999999876532 223233455555688888999999999999999999
Q ss_pred HHHHHhhc
Q 026228 233 LRYFFLNY 240 (241)
Q Consensus 233 l~~fl~~~ 240 (241)
++=|++.+
T Consensus 299 ~~~FlqG~ 306 (326)
T KOG2931|consen 299 FKYFLQGM 306 (326)
T ss_pred HHHHHccC
Confidence 99999764
No 56
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.57 E-value=4.8e-14 Score=106.85 Aligned_cols=201 Identities=18% Similarity=0.286 Sum_probs=116.4
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---cCCCCCeEEEEeCc-cccHHHHHHHhcCcC
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV---LEVKYPFFLVVQGF-LVGSYGLTWALKNPS 78 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~---l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~ 78 (241)
.|...||+|+||-+||||-....-- .++.++|-+++.+--+. .|.+. +.++ |. +||-+++-+|.++|
T Consensus 37 ~L~e~GyTv~aP~ypGHG~~~e~fl-----~t~~~DW~~~v~d~Y~~L~~~gy~e-I~v~--GlSmGGv~alkla~~~p- 107 (243)
T COG1647 37 YLNENGYTVYAPRYPGHGTLPEDFL-----KTTPRDWWEDVEDGYRDLKEAGYDE-IAVV--GLSMGGVFALKLAYHYP- 107 (243)
T ss_pred HHHHCCceEecCCCCCCCCCHHHHh-----cCCHHHHHHHHHHHHHHHHHcCCCe-EEEE--eecchhHHHHHHHhhCC-
Confidence 4677899999999999998753221 23556776666654444 45665 4443 66 45667889999999
Q ss_pred ccCeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHH
Q 026228 79 RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAAR 158 (241)
Q Consensus 79 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (241)
++++|.+++|.... .++...+ +++. +.. ..+.+. . ...+..+-....+.. .+....
T Consensus 108 -~K~iv~m~a~~~~k-~~~~iie----~~l~-y~~----~~kk~e-~-----k~~e~~~~e~~~~~~--~~~~~~----- 163 (243)
T COG1647 108 -PKKIVPMCAPVNVK-SWRIIIE----GLLE-YFR----NAKKYE-G-----KDQEQIDKEMKSYKD--TPMTTT----- 163 (243)
T ss_pred -ccceeeecCCcccc-cchhhhH----HHHH-HHH----Hhhhcc-C-----CCHHHHHHHHHHhhc--chHHHH-----
Confidence 99999998875321 1111100 0000 000 001000 0 001111100000100 000000
Q ss_pred hcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHH-hcCCCceeEEEeCCCCCCCCC-CChHHHHHHHHHH
Q 026228 159 KVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQ-KGNPNVVKLQMIEGAGHMPQE-DWPEKVVDGLRYF 236 (241)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~-~~~~~~~~~~~i~~agH~~~~-e~p~~~~~~l~~f 236 (241)
..+...++.+.+.+ ..|..|++++.|++|..+|.+.+..+- ...++..++.+++++||.+.. +..|++.+.+..|
T Consensus 164 -~~~~~~i~~~~~~~--~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~F 240 (243)
T COG1647 164 -AQLKKLIKDARRSL--DKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITF 240 (243)
T ss_pred -HHHHHHHHHHHhhh--hhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHH
Confidence 01112222222222 268899999999999999988776544 445555699999999999764 7789999999999
Q ss_pred Hhh
Q 026228 237 FLN 239 (241)
Q Consensus 237 l~~ 239 (241)
|++
T Consensus 241 L~~ 243 (243)
T COG1647 241 LEK 243 (243)
T ss_pred hhC
Confidence 964
No 57
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.56 E-value=1e-14 Score=115.97 Aligned_cols=222 Identities=20% Similarity=0.273 Sum_probs=106.4
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccC
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEK-GYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRIS 81 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~-~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~ 81 (241)
.+.+ +|-|+-+|.||+..-..+.+ .| .+ .|.+++|++|.++++.++++. ++-+|.| .|+-+-.++|+.||++|.
T Consensus 51 ~i~~-~f~i~Hi~aPGqe~ga~~~p~~y-~y-Psmd~LAe~l~~Vl~~f~lk~-vIg~GvG-AGAnIL~rfAl~~p~~V~ 125 (283)
T PF03096_consen 51 EILQ-NFCIYHIDAPGQEEGAATLPEGY-QY-PSMDQLAEMLPEVLDHFGLKS-VIGFGVG-AGANILARFALKHPERVL 125 (283)
T ss_dssp HHHT-TSEEEEEE-TTTSTT-----TT-------HHHHHCTHHHHHHHHT----EEEEEET-HHHHHHHHHHHHSGGGEE
T ss_pred HHhh-ceEEEEEeCCCCCCCcccccccc-cc-cCHHHHHHHHHHHHHhCCccE-EEEEeec-cchhhhhhccccCcccee
Confidence 3445 69999999999976433221 22 23 378999999999999999976 5544443 233345689999999999
Q ss_pred eEEEecCCCCCCCCcchHHhhhc---cchhhhhhhh-hHHHHHHHHhhCCCCccChhhHhhhhccccCCCCCh-h-HHHH
Q 026228 82 KLAILNSPLTASSPLPGLFQQLR---IPLLGEFTAQ-NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPG-F-ALLE 155 (241)
Q Consensus 82 ~lvl~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~ 155 (241)
+|||+|+-.....+.....+.+- +...+ .... ...+...++....... ...-...++........+. . ....
T Consensus 126 GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~g-mt~~~~d~Ll~h~Fg~~~~~~-n~Dlv~~yr~~l~~~~Np~Nl~~f~~ 203 (283)
T PF03096_consen 126 GLILVNPTCTAAGWMEWFYQKLSSWLLYSYG-MTSSVKDYLLWHYFGKEEEEN-NSDLVQTYRQHLDERINPKNLALFLN 203 (283)
T ss_dssp EEEEES---S---HHHHHHHHHH-------C-TTS-HHHHHHHHHS-HHHHHC-T-HHHHHHHHHHHT-TTHHHHHHHHH
T ss_pred EEEEEecCCCCccHHHHHHHHHhcccccccc-cccchHHhhhhcccccccccc-cHHHHHHHHHHHhcCCCHHHHHHHHH
Confidence 99999964432221111111110 00000 0000 0000001100000000 0000111111111111110 0 1111
Q ss_pred HHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHH
Q 026228 156 AARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRY 235 (241)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~ 235 (241)
++.. .++ +... .....||+|++.|+..+.. .+..+...+..|...++..+++||=.+.+|+|+++++.++=
T Consensus 204 sy~~--R~D----L~~~--~~~~~c~vLlvvG~~Sp~~-~~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~l 274 (283)
T PF03096_consen 204 SYNS--RTD----LSIE--RPSLGCPVLLVVGDNSPHV-DDVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKL 274 (283)
T ss_dssp HHHT-----------SE--CTTCCS-EEEEEETTSTTH-HHHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHH
T ss_pred HHhc--ccc----chhh--cCCCCCCeEEEEecCCcch-hhHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHH
Confidence 1111 011 1111 1245699999999998765 33444444566766789999999999999999999999999
Q ss_pred HHhhc
Q 026228 236 FFLNY 240 (241)
Q Consensus 236 fl~~~ 240 (241)
|++.+
T Consensus 275 FlQG~ 279 (283)
T PF03096_consen 275 FLQGM 279 (283)
T ss_dssp HHHHT
T ss_pred HHccC
Confidence 99864
No 58
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.55 E-value=7.8e-14 Score=131.54 Aligned_cols=64 Identities=16% Similarity=0.166 Sum_probs=55.8
Q ss_pred CCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeE-EEeCCCCCCCCC---CChHHHHHHHHHHHhhc
Q 026228 176 GSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKL-QMIEGAGHMPQE---DWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 176 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~-~~i~~agH~~~~---e~p~~~~~~l~~fl~~~ 240 (241)
+++++|+|+|||++|.++|++..+.+.+.+++ +++ +++++|||+.++ .-|+++...|.+||.++
T Consensus 294 ~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~-a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 294 ADITCPVLAFVGEVDDIGQPASVRGIRRAAPN-AEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred hhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 47899999999999999999999999888987 576 688999999774 67788999999999764
No 59
>PLN02872 triacylglycerol lipase
Probab=99.49 E-value=5.9e-13 Score=112.93 Aligned_cols=65 Identities=20% Similarity=0.255 Sum_probs=55.9
Q ss_pred CCC--CCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCC---CCCCCChHHHHHHHHHHHhhc
Q 026228 176 GSW--DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGH---MPQEDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 176 ~~~--~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH---~~~~e~p~~~~~~l~~fl~~~ 240 (241)
+++ ++|+++++|++|..+++...+.+.+.+++..+++.++++|| +...|.|+++.+.|.+||+++
T Consensus 320 ~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~ 389 (395)
T PLN02872 320 SLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSL 389 (395)
T ss_pred ccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHh
Confidence 455 57999999999999988878888887877458889999999 467799999999999999865
No 60
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.48 E-value=1.4e-12 Score=106.45 Aligned_cols=231 Identities=21% Similarity=0.181 Sum_probs=129.2
Q ss_pred CCCceEEeeCCCCCC-CCCCCCCCCCC--------CCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcC
Q 026228 6 DAGFHCFAPDWLGFG-FSDKPEKGYDD--------FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKN 76 (241)
Q Consensus 6 ~~~~~via~Dl~G~G-~S~~p~~~~~~--------~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~ 76 (241)
...|.||+.+-.|.+ -|+.|...... ..+|++|+++.-..++++|||++- ..|.+|+|||+.+++|+..|
T Consensus 90 t~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l-~avvGgSmGGMqaleWa~~y 168 (368)
T COG2021 90 TERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKL-AAVVGGSMGGMQALEWAIRY 168 (368)
T ss_pred ccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceE-eeeeccChHHHHHHHHHHhC
Confidence 346999999999987 55555432111 347888999988999999999874 44445778889999999999
Q ss_pred cCccCeEEEecCCCCCCCCcchHHhhhcc-----chh--hhhh-------------------hhh-HHHHHHHHhhC--C
Q 026228 77 PSRISKLAILNSPLTASSPLPGLFQQLRI-----PLL--GEFT-------------------AQN-AIMAERFIEAG--S 127 (241)
Q Consensus 77 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~-----~~~--~~~~-------------------~~~-~~~~~~~~~~~--~ 127 (241)
||+|++++.++++.......-.+....|. |-+ +.+. +.. ..+.++|.... .
T Consensus 169 Pd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~ 248 (368)
T COG2021 169 PDRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQAD 248 (368)
T ss_pred hHHHhhhheecccccCCHHHHHHHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhccccccc
Confidence 99999999998754221111111111110 101 0000 000 00111121100 0
Q ss_pred CCccC--hhhHhhhhc----cccCCCCChhH--HHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHH
Q 026228 128 PYVLK--LDKADVYRL----PYLASSGPGFA--LLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAE 199 (241)
Q Consensus 128 ~~~~~--~~~~~~~~~----~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~ 199 (241)
+.... ....+.|.. .+.....+... +..++...+.......+... .+++++|+|++-=+.|..+|++..+
T Consensus 249 ~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~ald~~D~s~~~~~l~~a--l~~i~~~~lv~gi~sD~lfp~~~~~ 326 (368)
T COG2021 249 PLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRALDYHDVSRGRGDLTAA--LARIKAPVLVVGITSDWLFPPELQR 326 (368)
T ss_pred ccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHHHhcCCCCCcCcHHHH--HhcCccCEEEEEecccccCCHHHHH
Confidence 00000 000000000 00000000000 00111111100000011111 2368899999999999999999999
Q ss_pred HHHhcCCCceeEEEe-CCCCCCCCCCChHHHHHHHHHHHhh
Q 026228 200 EFQKGNPNVVKLQMI-EGAGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 200 ~~~~~~~~~~~~~~i-~~agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
++.+.++....+++| ...||--++...+.+...|..||..
T Consensus 327 ~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 327 ALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFLAL 367 (368)
T ss_pred HHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHhhc
Confidence 999888874225444 6789999999999999999999974
No 61
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.46 E-value=7.3e-13 Score=103.74 Aligned_cols=74 Identities=20% Similarity=0.345 Sum_probs=55.7
Q ss_pred CceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC--CCCCeEEEEeCc-cccHHHHHHHh--cCcCccCe
Q 026228 8 GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE--VKYPFFLVVQGF-LVGSYGLTWAL--KNPSRISK 82 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~--~~~~~~lv~~g~-~gG~~~~~~a~--~~p~~v~~ 82 (241)
.-||+|+||||||+|.-.. . .+++.+.++.|+.+++..+= ...+++|| || |||+++.+.|. .-|. +.+
T Consensus 102 ~~r~~a~DlRgHGeTk~~~-e---~dlS~eT~~KD~~~~i~~~fge~~~~iilV--GHSmGGaIav~~a~~k~lps-l~G 174 (343)
T KOG2564|consen 102 RCRCLALDLRGHGETKVEN-E---DDLSLETMSKDFGAVIKELFGELPPQIILV--GHSMGGAIAVHTAASKTLPS-LAG 174 (343)
T ss_pred ceeEEEeeccccCccccCC-h---hhcCHHHHHHHHHHHHHHHhccCCCceEEE--eccccchhhhhhhhhhhchh-hhc
Confidence 4589999999999985432 2 24688999999999999874 23456666 45 78889876654 4676 899
Q ss_pred EEEecC
Q 026228 83 LAILNS 88 (241)
Q Consensus 83 lvl~~~ 88 (241)
|++++.
T Consensus 175 l~viDV 180 (343)
T KOG2564|consen 175 LVVIDV 180 (343)
T ss_pred eEEEEE
Confidence 999985
No 62
>PRK11071 esterase YqiA; Provisional
Probab=99.44 E-value=9.1e-12 Score=95.71 Aligned_cols=157 Identities=15% Similarity=0.114 Sum_probs=99.3
Q ss_pred CceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCcCccCeEEEe
Q 026228 8 GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSRISKLAIL 86 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~~v~~lvl~ 86 (241)
+|+|+++|+|||| +++++++.+++++++.++ +++| |+ +||.+++.+|..+|. ++|++
T Consensus 32 ~~~v~~~dl~g~~----------------~~~~~~l~~l~~~~~~~~-~~lv--G~S~Gg~~a~~~a~~~~~---~~vl~ 89 (190)
T PRK11071 32 DIEMIVPQLPPYP----------------ADAAELLESLVLEHGGDP-LGLV--GSSLGGYYATWLSQCFML---PAVVV 89 (190)
T ss_pred CCeEEeCCCCCCH----------------HHHHHHHHHHHHHcCCCC-eEEE--EECHHHHHHHHHHHHcCC---CEEEE
Confidence 6999999999984 246789999999999875 6666 55 567789999999994 46788
Q ss_pred cCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHHhcChhhhH
Q 026228 87 NSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDIS 166 (241)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (241)
|++.. + ...+ +.+.......... +. +. .........+..+...
T Consensus 90 ~~~~~-----~--~~~~----------------~~~~~~~~~~~~~----~~----~~----~~~~~~~d~~~~~~~~-- 132 (190)
T PRK11071 90 NPAVR-----P--FELL----------------TDYLGENENPYTG----QQ----YV----LESRHIYDLKVMQIDP-- 132 (190)
T ss_pred CCCCC-----H--HHHH----------------HHhcCCcccccCC----Cc----EE----EcHHHHHHHHhcCCcc--
Confidence 76432 1 0110 0111000000000 00 00 0011222222111110
Q ss_pred HhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 167 SRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 167 ~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
.+.++|+++|+|++|+++|.+.+..+.+. ++.++++|++|.. +..++..+.+.+|+.
T Consensus 133 ---------i~~~~~v~iihg~~De~V~~~~a~~~~~~----~~~~~~~ggdH~f--~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 133 ---------LESPDLIWLLQQTGDEVLDYRQAVAYYAA----CRQTVEEGGNHAF--VGFERYFNQIVDFLG 189 (190)
T ss_pred ---------CCChhhEEEEEeCCCCcCCHHHHHHHHHh----cceEEECCCCcch--hhHHHhHHHHHHHhc
Confidence 13577899999999999999988887762 3567889999997 555889999999975
No 63
>PRK10566 esterase; Provisional
Probab=99.44 E-value=5.9e-12 Score=100.76 Aligned_cols=58 Identities=24% Similarity=0.366 Sum_probs=46.5
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcCCC-----ceeEEEeCCCCCCCCCCChHHHHHHHHHHHhhc
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGNPN-----VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-----~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~~ 240 (241)
++|+|+++|++|..+|++.+..+.+.+.. .++.+.++|+||... |+ ..+.+.+||+++
T Consensus 186 ~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~---~~-~~~~~~~fl~~~ 248 (249)
T PRK10566 186 DRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT---PE-ALDAGVAFFRQH 248 (249)
T ss_pred CCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC---HH-HHHHHHHHHHhh
Confidence 68999999999999999888777765442 246778899999864 44 568899999875
No 64
>PRK13604 luxD acyl transferase; Provisional
Probab=99.43 E-value=6.8e-12 Score=101.84 Aligned_cols=47 Identities=21% Similarity=0.225 Sum_probs=40.2
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCC-CceeEEEeCCCCCCCCC
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNP-NVVKLQMIEGAGHMPQE 223 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~-~~~~~~~i~~agH~~~~ 223 (241)
++++|+|+|||+.|.++|++.++.+.+.+. +..++++++|++|...+
T Consensus 200 ~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 200 GLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLGE 247 (307)
T ss_pred hcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccCc
Confidence 567999999999999999999988887664 34699999999999654
No 65
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.34 E-value=1.1e-10 Score=92.19 Aligned_cols=213 Identities=19% Similarity=0.297 Sum_probs=123.4
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCcc-ccHHHHHHHhcCcCcc
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFL-VGSYGLTWALKNPSRI 80 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~-gG~~~~~~a~~~p~~v 80 (241)
+.|.+.|.|+|.+.+||||.|+++.. ..|+-.+.+.-+.++++.|++++..+.+ ||| |+.-|+++|..+| +
T Consensus 56 ~~l~~~~iR~I~iN~PGf~~t~~~~~----~~~~n~er~~~~~~ll~~l~i~~~~i~~--gHSrGcenal~la~~~~--~ 127 (297)
T PF06342_consen 56 PPLDEAGIRFIGINYPGFGFTPGYPD----QQYTNEERQNFVNALLDELGIKGKLIFL--GHSRGCENALQLAVTHP--L 127 (297)
T ss_pred hHHHHcCeEEEEeCCCCCCCCCCCcc----cccChHHHHHHHHHHHHHcCCCCceEEE--EeccchHHHHHHHhcCc--c
Confidence 35678899999999999999998763 4568888999999999999999765554 554 6678999999886 6
Q ss_pred CeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhcccc-CCCCCh-hHHHHHHH
Q 026228 81 SKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYL-ASSGPG-FALLEAAR 158 (241)
Q Consensus 81 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~ 158 (241)
.+++++|++..++... .....+...+..... ..++ +.... -....|+.... ...+.. ........
T Consensus 128 ~g~~lin~~G~r~Hkg--Irp~~r~~~i~~l~~---~lp~-~~~~~-------i~~~~y~~iG~KV~~GeeA~na~r~m~ 194 (297)
T PF06342_consen 128 HGLVLINPPGLRPHKG--IRPLSRMETINYLYD---LLPR-FIINA-------IMYFYYRMIGFKVSDGEEAINAMRSMQ 194 (297)
T ss_pred ceEEEecCCccccccC--cCHHHHHHHHHHHHH---HhhH-HHHHH-------HHHHHHHHhCeeecChHHHHHHHHHHH
Confidence 7999999876543211 110011111110000 0011 11000 00011111111 011111 01111222
Q ss_pred hcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCC--------------------------CceeEE
Q 026228 159 KVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNP--------------------------NVVKLQ 212 (241)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~--------------------------~~~~~~ 212 (241)
..++..-...+.. .++-++|+++.+|..|..+..+...++..... ..-..+
T Consensus 195 ~~df~~q~~~I~~---ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv 271 (297)
T PF06342_consen 195 NCDFEEQKEYIDK---LNKKPIKVLIAYGGKDHLIEEEISFEFAMKFKGLDHFNIEKEISEEEKPKILKSFASGQKGASV 271 (297)
T ss_pred hcCHHHHHHHHHH---hccCCCcEEEEEcCcchhhHHHHHHHHHHHhCCccceeeecCCChhHHHHHHHHHhcCCceeEE
Confidence 3344332222211 11335899999999999876655544432211 111355
Q ss_pred EeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 213 MIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 213 ~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
.+.+-||+.+-.+|+-+++.+...|+
T Consensus 272 ~f~~dgHf~qK~~A~lIA~~i~~mfe 297 (297)
T PF06342_consen 272 FFAKDGHFQQKFRADLIAEAIKKMFE 297 (297)
T ss_pred EEecCChHHhHHHHHHHHHHHHHhhC
Confidence 77788999999999999999988763
No 66
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.30 E-value=3.5e-11 Score=94.13 Aligned_cols=62 Identities=26% Similarity=0.362 Sum_probs=48.2
Q ss_pred CCCCeEEEecCCCCCCChhHHHHHH----hcCCCceeEEEeCCCCCCCC-CCChHHHHHHHHHHHhhc
Q 026228 178 WDKPVLVAWGISDKYLPQSVAEEFQ----KGNPNVVKLQMIEGAGHMPQ-EDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 178 ~~~P~l~i~G~~D~~~~~~~~~~~~----~~~~~~~~~~~i~~agH~~~-~e~p~~~~~~l~~fl~~~ 240 (241)
+++|+|+++|++|..+|+..+..+. +.... ++++++|++||... -+......+.+.+||++|
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~-~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~ 209 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKP-VELLIFPGEGHGFGNPENRRDWYERILDFFDKY 209 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSS-EEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCC-EEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHH
Confidence 4789999999999999887665544 33333 79999999999544 566678899999999875
No 67
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.23 E-value=3.2e-11 Score=96.99 Aligned_cols=79 Identities=19% Similarity=0.185 Sum_probs=59.6
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH---HHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCcC
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDK---LLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPS 78 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~---~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~ 78 (241)
.|++.||+|+++|+||||+|+.+... ++.+.+++|+.. ++++++.+ +++++ |+ +||.+++.+|.++|+
T Consensus 51 ~La~~Gy~Vl~~Dl~G~G~S~g~~~~-----~~~~~~~~Dv~~ai~~L~~~~~~-~v~Lv--G~SmGG~vAl~~A~~~p~ 122 (266)
T TIGR03101 51 AFAAGGFGVLQIDLYGCGDSAGDFAA-----ARWDVWKEDVAAAYRWLIEQGHP-PVTLW--GLRLGALLALDAANPLAA 122 (266)
T ss_pred HHHHCCCEEEEECCCCCCCCCCcccc-----CCHHHHHHHHHHHHHHHHhcCCC-CEEEE--EECHHHHHHHHHHHhCcc
Confidence 56778999999999999999764321 256677787765 45566654 46666 55 466678889999999
Q ss_pred ccCeEEEecCC
Q 026228 79 RISKLAILNSP 89 (241)
Q Consensus 79 ~v~~lvl~~~~ 89 (241)
+++++|++++.
T Consensus 123 ~v~~lVL~~P~ 133 (266)
T TIGR03101 123 KCNRLVLWQPV 133 (266)
T ss_pred ccceEEEeccc
Confidence 99999999753
No 68
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.21 E-value=5.1e-10 Score=86.81 Aligned_cols=196 Identities=16% Similarity=0.158 Sum_probs=114.0
Q ss_pred CceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCc---CccCeE
Q 026228 8 GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNP---SRISKL 83 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p---~~v~~l 83 (241)
...++++.+||.|.--..+ ...+++.+++.|..-+...-.++++.++ || |||+++.++|.+.- -....+
T Consensus 33 ~iel~avqlPGR~~r~~ep-----~~~di~~Lad~la~el~~~~~d~P~alf--GHSmGa~lAfEvArrl~~~g~~p~~l 105 (244)
T COG3208 33 DIELLAVQLPGRGDRFGEP-----LLTDIESLADELANELLPPLLDAPFALF--GHSMGAMLAFEVARRLERAGLPPRAL 105 (244)
T ss_pred hhheeeecCCCcccccCCc-----ccccHHHHHHHHHHHhccccCCCCeeec--ccchhHHHHHHHHHHHHHcCCCcceE
Confidence 4789999999998753221 2347888999888877743456688887 55 56778888876421 126667
Q ss_pred EEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhh-C-CCCccChhhHhhhhccccCCCCChhHHHHHHHhcC
Q 026228 84 AILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA-G-SPYVLKLDKADVYRLPYLASSGPGFALLEAARKVN 161 (241)
Q Consensus 84 vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (241)
.+.++..+.....+ .+. .. .+..+.+.+.+- + ++.++.+. +.... ....+| .+
T Consensus 106 fisg~~aP~~~~~~----~i~-----~~--~D~~~l~~l~~lgG~p~e~led~--El~~l-----------~LPilR-AD 160 (244)
T COG3208 106 FISGCRAPHYDRGK----QIH-----HL--DDADFLADLVDLGGTPPELLEDP--ELMAL-----------FLPILR-AD 160 (244)
T ss_pred EEecCCCCCCcccC----Ccc-----CC--CHHHHHHHHHHhCCCChHHhcCH--HHHHH-----------HHHHHH-HH
Confidence 66655322100000 000 00 011111112111 1 11211111 11000 011111 11
Q ss_pred hhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 162 FKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
++- .+... ......++||+.++.|++|..++.+....|.+...+..++++++ .|||...++.+++.+.|...+.
T Consensus 161 ~~~-~e~Y~-~~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fd-GgHFfl~~~~~~v~~~i~~~l~ 234 (244)
T COG3208 161 FRA-LESYR-YPPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFD-GGHFFLNQQREEVLARLEQHLA 234 (244)
T ss_pred HHH-hcccc-cCCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEec-CcceehhhhHHHHHHHHHHHhh
Confidence 110 00000 00123689999999999999999988888888888667999998 5999999999999999998884
No 69
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.14 E-value=1.3e-09 Score=94.79 Aligned_cols=79 Identities=14% Similarity=0.206 Sum_probs=58.2
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCCCeEEEEeCc-cccHHHHH----H
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----EVKYPFFLVVQGF-LVGSYGLT----W 72 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~~~lv~~g~-~gG~~~~~----~ 72 (241)
+.|.++||+|+.+|+++-+.+++ .+++++|++.|.+.++.. |.+ .+.++ |+ +||.+++. +
T Consensus 241 r~lv~qG~~VflIsW~nP~~~~r--------~~~ldDYv~~i~~Ald~V~~~tG~~-~vnl~--GyC~GGtl~a~~~a~~ 309 (560)
T TIGR01839 241 QYCLKNQLQVFIISWRNPDKAHR--------EWGLSTYVDALKEAVDAVRAITGSR-DLNLL--GACAGGLTCAALVGHL 309 (560)
T ss_pred HHHHHcCCeEEEEeCCCCChhhc--------CCCHHHHHHHHHHHHHHHHHhcCCC-CeeEE--EECcchHHHHHHHHHH
Confidence 35678899999999999777653 247788887777777665 344 46665 67 56655443 7
Q ss_pred HhcCcC-ccCeEEEecCCCC
Q 026228 73 ALKNPS-RISKLAILNSPLT 91 (241)
Q Consensus 73 a~~~p~-~v~~lvl~~~~~~ 91 (241)
++++++ +|++++++.++.-
T Consensus 310 aA~~~~~~V~sltllatplD 329 (560)
T TIGR01839 310 QALGQLRKVNSLTYLVSLLD 329 (560)
T ss_pred HhcCCCCceeeEEeeecccc
Confidence 788886 8999999998753
No 70
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.12 E-value=9e-10 Score=86.03 Aligned_cols=161 Identities=20% Similarity=0.254 Sum_probs=100.9
Q ss_pred CceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC-CCCCeEEEEeCccccHH-HHHHHhcCcCccCeEEE
Q 026228 8 GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE-VKYPFFLVVQGFLVGSY-GLTWALKNPSRISKLAI 85 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~-~~~~~~lv~~g~~gG~~-~~~~a~~~p~~v~~lvl 85 (241)
+.+|+++|-.|||.|+..+... .+-+-.+.+-+++++-. -++.++|. |.|.|.. .+.+|.+.| ++++||
T Consensus 88 n~nv~~~DYSGyG~S~G~psE~-----n~y~Di~avye~Lr~~~g~~~~Iil~--G~SiGt~~tv~Lasr~~--~~alVL 158 (258)
T KOG1552|consen 88 NCNVVSYDYSGYGRSSGKPSER-----NLYADIKAVYEWLRNRYGSPERIILY--GQSIGTVPTVDLASRYP--LAAVVL 158 (258)
T ss_pred cceEEEEecccccccCCCcccc-----cchhhHHHHHHHHHhhcCCCceEEEE--EecCCchhhhhHhhcCC--cceEEE
Confidence 6899999999999998754322 11122334445555443 23455555 6666655 578999999 999888
Q ss_pred ecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHHhcChhhh
Q 026228 86 LNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDI 165 (241)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (241)
.+ |+.. + +| .+. +. .+ ...+.. . .. .
T Consensus 159 ~S-Pf~S-----~----~r----------------v~~----~~-~~-------~~~~~d----------~---f~---~ 184 (258)
T KOG1552|consen 159 HS-PFTS-----G----MR----------------VAF----PD-TK-------TTYCFD----------A---FP---N 184 (258)
T ss_pred ec-cchh-----h----hh----------------hhc----cC-cc-------eEEeec----------c---cc---c
Confidence 75 3321 0 11 000 00 00 000000 0 00 0
Q ss_pred HHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 166 SSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 166 ~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
++++ +.+++|+|++||++|.+++......+-+..++..+-.++.|+||.- .|...+....++.|+.
T Consensus 185 i~kI------~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~-~~~~~~yi~~l~~f~~ 250 (258)
T KOG1552|consen 185 IEKI------SKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHND-IELYPEYIEHLRRFIS 250 (258)
T ss_pred cCcc------eeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcc-cccCHHHHHHHHHHHH
Confidence 1111 2678999999999999999988888888888866888999999995 4555557788888875
No 71
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.06 E-value=1.5e-09 Score=79.18 Aligned_cols=123 Identities=24% Similarity=0.387 Sum_probs=80.5
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HHcCCCCCeEEEEeCcc-ccHHHHHHHhcCcCcc
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLL-DVLEVKYPFFLVVQGFL-VGSYGLTWALKNPSRI 80 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l-~~l~~~~~~~lv~~g~~-gG~~~~~~a~~~p~~v 80 (241)
.|++.||.|+.+|+||+|.+... ++ .+++.+.+ +...-.+++.++ |+| ||.+++.++..+ +++
T Consensus 21 ~l~~~G~~v~~~~~~~~~~~~~~-----------~~-~~~~~~~~~~~~~~~~~i~l~--G~S~Gg~~a~~~~~~~-~~v 85 (145)
T PF12695_consen 21 ALAEQGYAVVAFDYPGHGDSDGA-----------DA-VERVLADIRAGYPDPDRIILI--GHSMGGAIAANLAARN-PRV 85 (145)
T ss_dssp HHHHTTEEEEEESCTTSTTSHHS-----------HH-HHHHHHHHHHHHCTCCEEEEE--EETHHHHHHHHHHHHS-TTE
T ss_pred HHHHCCCEEEEEecCCCCccchh-----------HH-HHHHHHHHHhhcCCCCcEEEE--EEccCcHHHHHHhhhc-cce
Confidence 46778999999999999998421 11 22222222 222222345555 565 555677777777 789
Q ss_pred CeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHHhc
Q 026228 81 SKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKV 160 (241)
Q Consensus 81 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (241)
+++|++++ + +. ..+
T Consensus 86 ~~~v~~~~-~------~~------------------------------------~~~----------------------- 99 (145)
T PF12695_consen 86 KAVVLLSP-Y------PD------------------------------------SED----------------------- 99 (145)
T ss_dssp SEEEEESE-S------SG------------------------------------CHH-----------------------
T ss_pred eEEEEecC-c------cc------------------------------------hhh-----------------------
Confidence 99988863 0 00 000
Q ss_pred ChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCC
Q 026228 161 NFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHM 220 (241)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~ 220 (241)
+ .+.++|+++++|++|..++.+..+.+.+.++...++++++|++|+
T Consensus 100 -----~---------~~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 100 -----L---------AKIRIPVLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp -----H---------TTTTSEEEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred -----h---------hccCCcEEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 0 023579999999999999888888877766655799999999996
No 72
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=98.94 E-value=2e-08 Score=76.30 Aligned_cols=196 Identities=23% Similarity=0.247 Sum_probs=107.5
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC-CCeEEEEeCcc-ccHHHHHHHhcCcCcc
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK-YPFFLVVQGFL-VGSYGLTWALKNPSRI 80 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~-~~~~lv~~g~~-gG~~~~~~a~~~p~~v 80 (241)
+|...|+.++.+|.+|-|+|...-.. -.| ...|+||..+++.+.-. +.+.+| .||| ||-+++.+|..+++ +
T Consensus 57 ~~e~~gis~fRfDF~GnGeS~gsf~~---Gn~--~~eadDL~sV~q~~s~~nr~v~vi-~gHSkGg~Vvl~ya~K~~d-~ 129 (269)
T KOG4667|consen 57 ALEKEGISAFRFDFSGNGESEGSFYY---GNY--NTEADDLHSVIQYFSNSNRVVPVI-LGHSKGGDVVLLYASKYHD-I 129 (269)
T ss_pred HHHhcCceEEEEEecCCCCcCCcccc---Ccc--cchHHHHHHHHHHhccCceEEEEE-EeecCccHHHHHHHHhhcC-c
Confidence 46677999999999999999864321 123 33569999999988643 222222 2665 56678899999998 6
Q ss_pred CeEEEecCCCCCCCCcchHHh-hhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHHh
Q 026228 81 SKLAILNSPLTASSPLPGLFQ-QLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARK 159 (241)
Q Consensus 81 ~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (241)
+.++.++.-+ ...+... .+. ....++....+ ++-.....--| .+.. .+. .+.+.+
T Consensus 130 ~~viNcsGRy----dl~~~I~eRlg-----------~~~l~~ike~G--fid~~~rkG~y--~~rv--t~e-SlmdrL-- 185 (269)
T KOG4667|consen 130 RNVINCSGRY----DLKNGINERLG-----------EDYLERIKEQG--FIDVGPRKGKY--GYRV--TEE-SLMDRL-- 185 (269)
T ss_pred hheEEccccc----chhcchhhhhc-----------ccHHHHHHhCC--ceecCcccCCc--Ccee--cHH-HHHHHH--
Confidence 6655443211 1111110 000 00111111111 00000000000 0000 000 011110
Q ss_pred cChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHH
Q 026228 160 VNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 237 (241)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl 237 (241)
+. +.-..+ ..-+.+||+|-+||..|.++|.+.+.++++.+|+ .++++||||-|.....+-+ ++.....|.
T Consensus 186 -nt-d~h~ac----lkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L~iIEgADHnyt~~q~~-l~~lgl~f~ 255 (269)
T KOG4667|consen 186 -NT-DIHEAC----LKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKLEIIEGADHNYTGHQSQ-LVSLGLEFI 255 (269)
T ss_pred -hc-hhhhhh----cCcCccCceEEEeccCCceeechhHHHHHHhccC-CceEEecCCCcCccchhhh-HhhhcceeE
Confidence 00 000000 1124589999999999999999999999999998 6999999999996654443 334444443
No 73
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.93 E-value=5.2e-08 Score=82.48 Aligned_cols=65 Identities=17% Similarity=0.222 Sum_probs=52.0
Q ss_pred CCCC-CCeEEEecCCCCCCChhHHHHHHhcC---CC-ceeEEEeCCCCCCCC---CCChHHHHHHHHHHHhhc
Q 026228 176 GSWD-KPVLVAWGISDKYLPQSVAEEFQKGN---PN-VVKLQMIEGAGHMPQ---EDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 176 ~~~~-~P~l~i~G~~D~~~~~~~~~~~~~~~---~~-~~~~~~i~~agH~~~---~e~p~~~~~~l~~fl~~~ 240 (241)
++|+ +|+|.+.|+.|.++|++.+..+.+++ +. ..+.++.+++||+=. -.-.+++...|.+||.++
T Consensus 334 ~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 334 GAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQPGVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred HHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecCCCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 4688 99999999999999999998888875 43 224667779999844 356688899999999764
No 74
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.91 E-value=3.3e-08 Score=80.81 Aligned_cols=73 Identities=30% Similarity=0.423 Sum_probs=57.4
Q ss_pred ceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccH-HHHHHHhcCcCccCeEEEec
Q 026228 9 FHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILN 87 (241)
Q Consensus 9 ~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~-~~~~~a~~~p~~v~~lvl~~ 87 (241)
|-||||.|||||.|++|... + +...+.|..+..+|=+||.++ +.+- |..+|+ ++..+|-.+|++|.++=+-.
T Consensus 189 FEVI~PSlPGygwSd~~sk~--G--Fn~~a~ArvmrkLMlRLg~nk-ffiq--GgDwGSiI~snlasLyPenV~GlHlnm 261 (469)
T KOG2565|consen 189 FEVIAPSLPGYGWSDAPSKT--G--FNAAATARVMRKLMLRLGYNK-FFIQ--GGDWGSIIGSNLASLYPENVLGLHLNM 261 (469)
T ss_pred EEEeccCCCCcccCcCCccC--C--ccHHHHHHHHHHHHHHhCcce-eEee--cCchHHHHHHHHHhhcchhhhHhhhcc
Confidence 78999999999999998643 2 356788999999999999987 5553 434666 57789999999999985443
Q ss_pred C
Q 026228 88 S 88 (241)
Q Consensus 88 ~ 88 (241)
+
T Consensus 262 ~ 262 (469)
T KOG2565|consen 262 C 262 (469)
T ss_pred c
Confidence 3
No 75
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.88 E-value=1.8e-08 Score=90.79 Aligned_cols=64 Identities=22% Similarity=0.306 Sum_probs=52.1
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhc---CCCceeEEEeCCCCCCCCC-CChHHHHHHHHHHHhhc
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQE-DWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~---~~~~~~~~~i~~agH~~~~-e~p~~~~~~l~~fl~~~ 240 (241)
++.+|+|+|||+.|..+|.+.++.+.+. ....++++++|+.||.+.- ++-.++.+.+.+|+++|
T Consensus 549 ~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~~~~~ 616 (620)
T COG1506 549 NIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDWFKRH 616 (620)
T ss_pred ccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHHHHHH
Confidence 6789999999999999998777665543 2224799999999999876 66778888899998876
No 76
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=98.88 E-value=9.4e-09 Score=87.83 Aligned_cols=75 Identities=11% Similarity=0.184 Sum_probs=56.8
Q ss_pred CceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----C--CCCCeEEEEeCccccHHHHHHHhcCcCccC
Q 026228 8 GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----E--VKYPFFLVVQGFLVGSYGLTWALKNPSRIS 81 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l----~--~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~ 81 (241)
+|+||++|++|+|.|..+... .+ ....+++++++++.| + +++ ++||||. +||.++..++..+|++|.
T Consensus 73 d~nVI~VDw~g~g~s~y~~a~----~~-t~~vg~~la~lI~~L~~~~gl~l~~-VhLIGHS-LGAhIAg~ag~~~p~rV~ 145 (442)
T TIGR03230 73 SANVIVVDWLSRAQQHYPTSA----AY-TKLVGKDVAKFVNWMQEEFNYPWDN-VHLLGYS-LGAHVAGIAGSLTKHKVN 145 (442)
T ss_pred CCEEEEEECCCcCCCCCcccc----cc-HHHHHHHHHHHHHHHHHhhCCCCCc-EEEEEEC-HHHHHHHHHHHhCCccee
Confidence 699999999999998766422 12 356777788777765 3 454 7787432 566788888889999999
Q ss_pred eEEEecCC
Q 026228 82 KLAILNSP 89 (241)
Q Consensus 82 ~lvl~~~~ 89 (241)
++++++++
T Consensus 146 rItgLDPA 153 (442)
T TIGR03230 146 RITGLDPA 153 (442)
T ss_pred EEEEEcCC
Confidence 99999974
No 77
>PLN02442 S-formylglutathione hydrolase
Probab=98.86 E-value=7.7e-08 Score=78.62 Aligned_cols=83 Identities=25% Similarity=0.375 Sum_probs=51.4
Q ss_pred CcCCCceEEeeCCCCCCC-----CCC---C-CCC-C-----------CCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeC
Q 026228 4 MSDAGFHCFAPDWLGFGF-----SDK---P-EKG-Y-----------DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQG 62 (241)
Q Consensus 4 L~~~~~~via~Dl~G~G~-----S~~---p-~~~-~-----------~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g 62 (241)
++..|+.||.||.+++|. ++. . ... + .-..+-.+++.+.+..+.+.++.++ ++++ |
T Consensus 73 ~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~-~~i~--G 149 (283)
T PLN02442 73 AAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSR-ASIF--G 149 (283)
T ss_pred HhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCc-eEEE--E
Confidence 455689999999987761 110 0 000 0 0001123445555666666667665 4554 5
Q ss_pred c-cccHHHHHHHhcCcCccCeEEEecCC
Q 026228 63 F-LVGSYGLTWALKNPSRISKLAILNSP 89 (241)
Q Consensus 63 ~-~gG~~~~~~a~~~p~~v~~lvl~~~~ 89 (241)
+ +||..++.+++++|+++++++.+++.
T Consensus 150 ~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 177 (283)
T PLN02442 150 HSMGGHGALTIYLKNPDKYKSVSAFAPI 177 (283)
T ss_pred EChhHHHHHHHHHhCchhEEEEEEECCc
Confidence 5 56667888999999999999888754
No 78
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.83 E-value=2.4e-08 Score=80.84 Aligned_cols=63 Identities=27% Similarity=0.382 Sum_probs=47.3
Q ss_pred CCCCCCeEEEecCCCCCCChhHHHHHHh-cCCCceeEEEeCCCCCCCCCC----ChH-HHHHHHHHHHhh
Q 026228 176 GSWDKPVLVAWGISDKYLPQSVAEEFQK-GNPNVVKLQMIEGAGHMPQED----WPE-KVVDGLRYFFLN 239 (241)
Q Consensus 176 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~-~~~~~~~~~~i~~agH~~~~e----~p~-~~~~~l~~fl~~ 239 (241)
.+|.+|+|+|+..+|++++++.+..... ..|+ +.+.+-+..||.-.+. +|. =.-+.+.+||..
T Consensus 271 ~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~-v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~ 339 (345)
T COG0429 271 PKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPN-VLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDP 339 (345)
T ss_pred cccccceEEEecCCCCCCChhhCCcchhcCCCc-eEEEeecCCceEEeccCccccchhhHHHHHHHHHHH
Confidence 3789999999999999999877766655 5665 7888889999997776 442 233555666654
No 79
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.83 E-value=8e-07 Score=72.34 Aligned_cols=82 Identities=24% Similarity=0.367 Sum_probs=51.3
Q ss_pred CCCceEEeeCC--CCCCCCCCCCC-------C-C-------CCCCCCH-HHHHHHHHHHHHH-cCCC-CCeEEEEeCc-c
Q 026228 6 DAGFHCFAPDW--LGFGFSDKPEK-------G-Y-------DDFDFTE-NEFHEELDKLLDV-LEVK-YPFFLVVQGF-L 64 (241)
Q Consensus 6 ~~~~~via~Dl--~G~G~S~~p~~-------~-~-------~~~~~~~-~~~a~~l~~~l~~-l~~~-~~~~lv~~g~-~ 64 (241)
+.||.||+||. +|+|.++.+.. + + ....++. ..++++|..++++ ++++ +.+.++ |+ +
T Consensus 70 ~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--G~S~ 147 (275)
T TIGR02821 70 EHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGIT--GHSM 147 (275)
T ss_pred hcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEE--EECh
Confidence 45899999998 56654432100 0 0 0001232 3356788888887 3332 235554 55 5
Q ss_pred ccHHHHHHHhcCcCccCeEEEecCC
Q 026228 65 VGSYGLTWALKNPSRISKLAILNSP 89 (241)
Q Consensus 65 gG~~~~~~a~~~p~~v~~lvl~~~~ 89 (241)
||.+++.+++++|+++++++++++.
T Consensus 148 GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 148 GGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred hHHHHHHHHHhCcccceEEEEECCc
Confidence 6677889999999999999888653
No 80
>PLN00021 chlorophyllase
Probab=98.82 E-value=5.7e-08 Score=80.27 Aligned_cols=75 Identities=19% Similarity=0.249 Sum_probs=46.0
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-----------cCCCCCeEEEEeCc-cccHHH
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV-----------LEVKYPFFLVVQGF-LVGSYG 69 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~-----------l~~~~~~~lv~~g~-~gG~~~ 69 (241)
+.|+++||.|+++|++|++.+... ..+++ ++++..++.+ .+.+ ++.++ || +||.++
T Consensus 73 ~~Las~G~~VvapD~~g~~~~~~~--------~~i~d-~~~~~~~l~~~l~~~l~~~~~~d~~-~v~l~--GHS~GG~iA 140 (313)
T PLN00021 73 QHIASHGFIVVAPQLYTLAGPDGT--------DEIKD-AAAVINWLSSGLAAVLPEGVRPDLS-KLALA--GHSRGGKTA 140 (313)
T ss_pred HHHHhCCCEEEEecCCCcCCCCch--------hhHHH-HHHHHHHHHhhhhhhcccccccChh-heEEE--EECcchHHH
Confidence 357788999999999997543211 12222 3333333332 2233 35665 45 577788
Q ss_pred HHHHhcCcC-----ccCeEEEecC
Q 026228 70 LTWALKNPS-----RISKLAILNS 88 (241)
Q Consensus 70 ~~~a~~~p~-----~v~~lvl~~~ 88 (241)
+.+|+.+|+ ++++++++++
T Consensus 141 ~~lA~~~~~~~~~~~v~ali~ldP 164 (313)
T PLN00021 141 FALALGKAAVSLPLKFSALIGLDP 164 (313)
T ss_pred HHHHhhccccccccceeeEEeecc
Confidence 899988875 5677777764
No 81
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=98.71 E-value=2.3e-07 Score=78.08 Aligned_cols=194 Identities=18% Similarity=0.157 Sum_probs=96.3
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC-C-CCeEEEEeCcc-ccHHHHHHHhcCcC
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV-K-YPFFLVVQGFL-VGSYGLTWALKNPS 78 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~-~-~~~~lv~~g~~-gG~~~~~~a~~~p~ 78 (241)
+.|+.+|+.++++|.||-|.|.+-.-.. ++ +.+-+.|.+++..+.- + +.+.++ |.+ ||.++.++|..+++
T Consensus 212 ~~l~~rGiA~LtvDmPG~G~s~~~~l~~---D~--~~l~~aVLd~L~~~p~VD~~RV~~~--G~SfGGy~AvRlA~le~~ 284 (411)
T PF06500_consen 212 DYLAPRGIAMLTVDMPGQGESPKWPLTQ---DS--SRLHQAVLDYLASRPWVDHTRVGAW--GFSFGGYYAVRLAALEDP 284 (411)
T ss_dssp CCCHHCT-EEEEE--TTSGGGTTT-S-S----C--CHHHHHHHHHHHHSTTEEEEEEEEE--EETHHHHHHHHHHHHTTT
T ss_pred HHHHhCCCEEEEEccCCCcccccCCCCc---CH--HHHHHHHHHHHhcCCccChhheEEE--EeccchHHHHHHHHhccc
Confidence 4678899999999999999996533211 22 3466777777777652 2 123333 554 66678899999999
Q ss_pred ccCeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHH
Q 026228 79 RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAAR 158 (241)
Q Consensus 79 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (241)
|++++|..+++.......+. .+-+.|.+. . ..++.++- ..... ...+...+.
T Consensus 285 RlkavV~~Ga~vh~~ft~~~--~~~~~P~my----~-d~LA~rlG-----~~~~~----------------~~~l~~el~ 336 (411)
T PF06500_consen 285 RLKAVVALGAPVHHFFTDPE--WQQRVPDMY----L-DVLASRLG-----MAAVS----------------DESLRGELN 336 (411)
T ss_dssp T-SEEEEES---SCGGH-HH--HHTTS-HHH----H-HHHHHHCT------SCE-----------------HHHHHHHGG
T ss_pred ceeeEeeeCchHhhhhccHH--HHhcCCHHH----H-HHHHHHhC-----CccCC----------------HHHHHHHHH
Confidence 99999998876432111011 111122110 0 00111110 00000 001111112
Q ss_pred hcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 159 KVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
++++.. +.+ +...+..+|+|.+.|++|+++|.+...-++..-.+. +...|+... ..+.=++-+..+.+||+
T Consensus 337 ~~SLk~--qGl---L~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~g-k~~~~~~~~---~~~gy~~al~~~~~Wl~ 407 (411)
T PF06500_consen 337 KFSLKT--QGL---LSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTDG-KALRIPSKP---LHMGYPQALDEIYKWLE 407 (411)
T ss_dssp GGSTTT--TTT---TTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--EEEEE-SSS---HHHHHHHHHHHHHHHHH
T ss_pred hcCcch--hcc---ccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCCC-ceeecCCCc---cccchHHHHHHHHHHHH
Confidence 222210 001 112356899999999999999998887777655543 777877543 12223456677777876
Q ss_pred h
Q 026228 239 N 239 (241)
Q Consensus 239 ~ 239 (241)
.
T Consensus 408 ~ 408 (411)
T PF06500_consen 408 D 408 (411)
T ss_dssp H
T ss_pred H
Confidence 4
No 82
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=98.68 E-value=7e-08 Score=73.46 Aligned_cols=175 Identities=21% Similarity=0.306 Sum_probs=101.4
Q ss_pred CCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCC-CCeEEEEeCccccHHHHHHHhcCcCccCeEEE
Q 026228 7 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVK-YPFFLVVQGFLVGSYGLTWALKNPSRISKLAI 85 (241)
Q Consensus 7 ~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~-~~~~lv~~g~~gG~~~~~~a~~~p~~v~~lvl 85 (241)
-+-.|..++-||||.|...+... .+.++ --..|.-++.+-..+ ++.+|.|. +.||+++..+|..+.++++++++
T Consensus 105 l~mnv~ivsYRGYG~S~GspsE~---GL~lD-s~avldyl~t~~~~dktkivlfGr-SlGGAvai~lask~~~ri~~~iv 179 (300)
T KOG4391|consen 105 LKMNVLIVSYRGYGKSEGSPSEE---GLKLD-SEAVLDYLMTRPDLDKTKIVLFGR-SLGGAVAIHLASKNSDRISAIIV 179 (300)
T ss_pred cCceEEEEEeeccccCCCCcccc---ceecc-HHHHHHHHhcCccCCcceEEEEec-ccCCeeEEEeeccchhheeeeee
Confidence 35579999999999998654321 11111 112233333333333 34555543 36888898999999999999999
Q ss_pred ecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHHhcChhhh
Q 026228 86 LNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDI 165 (241)
Q Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (241)
-|+-... |. .-.+.+..+. .+ .+ + .-.+.. .+.-
T Consensus 180 ENTF~SI----p~----~~i~~v~p~~------~k-~i----~-------~lc~kn-----------------~~~S--- 213 (300)
T KOG4391|consen 180 ENTFLSI----PH----MAIPLVFPFP------MK-YI----P-------LLCYKN-----------------KWLS--- 213 (300)
T ss_pred echhccc----hh----hhhheeccch------hh-HH----H-------HHHHHh-----------------hhcc---
Confidence 8862211 10 0001000000 00 00 0 000000 0100
Q ss_pred HHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCC-ceeEEEeCCCCCCCCCCChHHHHHHHHHHHhh
Q 026228 166 SSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 166 ~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
...+. +-.+|.|+|.|..|..+|+.+.+.+-+.+|. ..++.++|++.|.=.+-. |---++|.+||.+
T Consensus 214 ~~ki~------~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~-dGYfq~i~dFlaE 281 (300)
T KOG4391|consen 214 YRKIG------QCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDGTHNDTWIC-DGYFQAIEDFLAE 281 (300)
T ss_pred hhhhc------cccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCCccCceEEe-ccHHHHHHHHHHH
Confidence 01110 2368999999999999999888888888875 338899999999876654 3355788888754
No 83
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.59 E-value=8.4e-07 Score=74.14 Aligned_cols=82 Identities=21% Similarity=0.329 Sum_probs=56.7
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCcCc-c
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSR-I 80 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~~-v 80 (241)
.|..+|+.|+.+|+++=.++..... . .+|-.+.+.+.|....+..|.++ +.+| |+ .||.+....++.+|.+ |
T Consensus 134 ~l~~~g~~vfvIsw~nPd~~~~~~~-~--edYi~e~l~~aid~v~~itg~~~-Inli--GyCvGGtl~~~ala~~~~k~I 207 (445)
T COG3243 134 WLLEQGLDVFVISWRNPDASLAAKN-L--EDYILEGLSEAIDTVKDITGQKD-INLI--GYCVGGTLLAAALALMAAKRI 207 (445)
T ss_pred HHHHcCCceEEEeccCchHhhhhcc-H--HHHHHHHHHHHHHHHHHHhCccc-ccee--eEecchHHHHHHHHhhhhccc
Confidence 3566799999999998776655221 1 01222445566777777878765 6776 66 6777776666666766 9
Q ss_pred CeEEEecCCC
Q 026228 81 SKLAILNSPL 90 (241)
Q Consensus 81 ~~lvl~~~~~ 90 (241)
++++++.++.
T Consensus 208 ~S~T~lts~~ 217 (445)
T COG3243 208 KSLTLLTSPV 217 (445)
T ss_pred ccceeeecch
Confidence 9999998875
No 84
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.59 E-value=1.5e-06 Score=65.14 Aligned_cols=150 Identities=18% Similarity=0.229 Sum_probs=98.1
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccH-HHHHHHhcCcCccC
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRIS 81 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~-~~~~~a~~~p~~v~ 81 (241)
.|.+.||.|+.+|.||-|+|...-.. + .-..+ =+..+.+|+++..-+.+...+ .|+|-|+ +++++|.+.|+.--
T Consensus 55 ~l~~~G~atlRfNfRgVG~S~G~fD~--G-iGE~~-Da~aaldW~~~~hp~s~~~~l-~GfSFGa~Ia~~la~r~~e~~~ 129 (210)
T COG2945 55 ALVKRGFATLRFNFRGVGRSQGEFDN--G-IGELE-DAAAALDWLQARHPDSASCWL-AGFSFGAYIAMQLAMRRPEILV 129 (210)
T ss_pred HHHhCCceEEeecccccccccCcccC--C-cchHH-HHHHHHHHHHhhCCCchhhhh-cccchHHHHHHHHHHhcccccc
Confidence 47788999999999999999875321 0 11223 355666788887655544233 3787554 68888888876332
Q ss_pred eEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHHhcC
Q 026228 82 KLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVN 161 (241)
Q Consensus 82 ~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (241)
-+.++ ++. +. ..|. +
T Consensus 130 ~is~~-p~~-------~~--------------------~dfs-------------------~------------------ 144 (210)
T COG2945 130 FISIL-PPI-------NA--------------------YDFS-------------------F------------------ 144 (210)
T ss_pred eeecc-CCC-------Cc--------------------hhhh-------------------h------------------
Confidence 22111 000 00 0000 0
Q ss_pred hhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 162 FKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
+ ..-..|.++|+|+.|.+++.....++.+..+ .++++++++.||-+-. -+.+.+.+.+||.
T Consensus 145 ----l---------~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~~--~~~i~i~~a~HFF~gK-l~~l~~~i~~~l~ 205 (210)
T COG2945 145 ----L---------APCPSPGLVIQGDADDVVDLVAVLKWQESIK--ITVITIPGADHFFHGK-LIELRDTIADFLE 205 (210)
T ss_pred ----c---------cCCCCCceeEecChhhhhcHHHHHHhhcCCC--CceEEecCCCceeccc-HHHHHHHHHHHhh
Confidence 0 0225799999999999998877777777644 4789999999997654 5668889999884
No 85
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.55 E-value=1.5e-06 Score=68.13 Aligned_cols=64 Identities=23% Similarity=0.334 Sum_probs=39.3
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcC---CCceeEEEeCCCCCCCCCCCh--------HHHHHHHHHHHhhc
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMPQEDWP--------EKVVDGLRYFFLNY 240 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~agH~~~~e~p--------~~~~~~l~~fl~~~ 240 (241)
++++|+++++|+.|+.++.+....+.+.+ ....++++++|++|--..... ++-.+.+.+||++|
T Consensus 143 ~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~~~~~~aa~~a~~~~~~ff~~~ 217 (218)
T PF01738_consen 143 KIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRPPYDPAAAEDAWQRTLAFFKRH 217 (218)
T ss_dssp G--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTSTT--HHHHHHHHHHHHHHHCC-
T ss_pred ccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCcccCHHHHHHHHHHHHHHHHhc
Confidence 34789999999999999987654444332 334799999999998653222 45556677888766
No 86
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.49 E-value=1.2e-07 Score=61.91 Aligned_cols=43 Identities=19% Similarity=0.385 Sum_probs=34.9
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLD 48 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~ 48 (241)
+.|++.||.|+++|+||||+|+..+. +.-+++++++|+..+++
T Consensus 37 ~~L~~~G~~V~~~D~rGhG~S~g~rg----~~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 37 EFLAEQGYAVFAYDHRGHGRSEGKRG----HIDSFDDYVDDLHQFIQ 79 (79)
T ss_pred HHHHhCCCEEEEECCCcCCCCCCccc----ccCCHHHHHHHHHHHhC
Confidence 46888999999999999999986543 22367899999998874
No 87
>PRK11460 putative hydrolase; Provisional
Probab=98.47 E-value=3e-06 Score=67.26 Aligned_cols=61 Identities=21% Similarity=0.223 Sum_probs=45.8
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcCC---CceeEEEeCCCCCCCCCCChHHHHHHHHHHHhh
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGNP---NVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~---~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
++|+++++|++|+++|.+.+..+.+.+. ..+++++++++||.+..|.-+.+.+-+..+|..
T Consensus 148 ~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l~~ 211 (232)
T PRK11460 148 ATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYTVPK 211 (232)
T ss_pred CCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHHcch
Confidence 4799999999999999887766554332 236888899999999866666666666666543
No 88
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.46 E-value=2.4e-07 Score=75.37 Aligned_cols=78 Identities=18% Similarity=0.231 Sum_probs=52.8
Q ss_pred cCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc------CCCCCeEEEEeCc-cccHHHHHHHhcCc
Q 026228 5 SDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL------EVKYPFFLVVQGF-LVGSYGLTWALKNP 77 (241)
Q Consensus 5 ~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l------~~~~~~~lv~~g~-~gG~~~~~~a~~~p 77 (241)
...+|+||++|++|++.+..+.. ..+....++++..+++.| +.+ .+++| || +||.++..++.++|
T Consensus 63 ~~~~~nVi~vD~~~~~~~~y~~a-----~~~~~~v~~~la~~l~~L~~~~g~~~~-~i~lI--GhSlGa~vAg~~a~~~~ 134 (275)
T cd00707 63 SRGDYNVIVVDWGRGANPNYPQA-----VNNTRVVGAELAKFLDFLVDNTGLSLE-NVHLI--GHSLGAHVAGFAGKRLN 134 (275)
T ss_pred hcCCCEEEEEECccccccChHHH-----HHhHHHHHHHHHHHHHHHHHhcCCChH-HEEEE--EecHHHHHHHHHHHHhc
Confidence 34579999999999854433221 123444556666666654 334 47777 55 46667888888999
Q ss_pred CccCeEEEecCCC
Q 026228 78 SRISKLAILNSPL 90 (241)
Q Consensus 78 ~~v~~lvl~~~~~ 90 (241)
++|++++.++++.
T Consensus 135 ~~v~~iv~LDPa~ 147 (275)
T cd00707 135 GKLGRITGLDPAG 147 (275)
T ss_pred CccceeEEecCCc
Confidence 9999999999643
No 89
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.44 E-value=1.2e-05 Score=74.12 Aligned_cols=63 Identities=17% Similarity=0.150 Sum_probs=43.1
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcC---CCceeEEEeCCCCCCC-CCCChHHHHHHHHHHHhhc
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGN---PNVVKLQMIEGAGHMP-QEDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~~~~~~~i~~agH~~-~~e~p~~~~~~l~~fl~~~ 240 (241)
++++|+|+++|..|..+++.....+.+.+ ....++.+. ..+|.. ....+.++.+.+..||..|
T Consensus 453 kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~pkkL~l~-~g~H~~~~~~~~~d~~e~~~~Wfd~~ 519 (767)
T PRK05371 453 KIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVPKKLFLH-QGGHVYPNNWQSIDFRDTMNAWFTHK 519 (767)
T ss_pred CCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCCeEEEEe-CCCccCCCchhHHHHHHHHHHHHHhc
Confidence 78999999999999998765443333222 222456544 568864 4456678888899998765
No 90
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.43 E-value=3.2e-06 Score=66.25 Aligned_cols=58 Identities=24% Similarity=0.316 Sum_probs=39.4
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhc---CCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHhhc
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~---~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~~ 240 (241)
++|++++||++|+++|.+..+...+. ....++++.++|.||.+. .+....+++||+++
T Consensus 155 ~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~----~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 155 KTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS----PEELRDLREFLEKH 215 (216)
T ss_dssp TS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS------HHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC----HHHHHHHHHHHhhh
Confidence 58999999999999998766544432 222479999999999875 34557788898764
No 91
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.43 E-value=2.8e-06 Score=65.55 Aligned_cols=61 Identities=18% Similarity=0.305 Sum_probs=47.3
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCC-ceeEEEeCC----CCCCCCCCCh-HHHHHHHHHHH
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEG----AGHMPQEDWP-EKVVDGLRYFF 237 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~----agH~~~~e~p-~~~~~~l~~fl 237 (241)
++++|+.++-..+|+..|+.....+....++ ..+...++. .||+=.--+| |.+-+.+.+|+
T Consensus 214 aVrtPi~~~~~~DD~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 214 AVRTPITFSRALDDPWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred HhcCceeeeccCCCCcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 5689999999999999999888888876554 235555555 4999776666 88888888776
No 92
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=98.42 E-value=1.4e-05 Score=62.89 Aligned_cols=193 Identities=14% Similarity=0.235 Sum_probs=104.7
Q ss_pred ceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCcc-ccHHHHHHHhc---CcCccCeEE
Q 026228 9 FHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFL-VGSYGLTWALK---NPSRISKLA 84 (241)
Q Consensus 9 ~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~-gG~~~~~~a~~---~p~~v~~lv 84 (241)
+.|++++.||.+....+. -+++++++...+.+.+..-+.++.|+ ||| ||.+|+.+|.. .-..|..|+
T Consensus 28 ~~v~~i~~~~~~~~~~~~-------~si~~la~~y~~~I~~~~~~gp~~L~--G~S~Gg~lA~E~A~~Le~~G~~v~~l~ 98 (229)
T PF00975_consen 28 IGVYGIEYPGRGDDEPPP-------DSIEELASRYAEAIRARQPEGPYVLA--GWSFGGILAFEMARQLEEAGEEVSRLI 98 (229)
T ss_dssp EEEEEECSTTSCTTSHEE-------SSHHHHHHHHHHHHHHHTSSSSEEEE--EETHHHHHHHHHHHHHHHTT-SESEEE
T ss_pred EEEEEEecCCCCCCCCCC-------CCHHHHHHHHHHHhhhhCCCCCeeeh--ccCccHHHHHHHHHHHHHhhhccCceE
Confidence 789999999998433222 27899999999888887766577776 675 56678887752 444599999
Q ss_pred EecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCC-CCccChhhHhhhhccccCCCCChhHHHHHHHhcChh
Q 026228 85 ILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGS-PYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFK 163 (241)
Q Consensus 85 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (241)
+++++.+.....+. ...... . ...+.+..... +..... ...... ......+. ..
T Consensus 99 liD~~~p~~~~~~~-~~~~~~---~-------~~~~~~~~~~~~~~~~~~-~~~~~~-----------~~~~~~~~-~~- 153 (229)
T PF00975_consen 99 LIDSPPPSIKERPR-SREPSD---E-------QFIEELRRIGGTPDASLE-DEELLA-----------RLLRALRD-DF- 153 (229)
T ss_dssp EESCSSTTCHSCHH-HHHCHH---H-------HHHHHHHHHCHHHHHHCH-HHHHHH-----------HHHHHHHH-HH-
T ss_pred EecCCCCCcccchh-hhhhhH---H-------HHHHHHHHhcCCchhhhc-CHHHHH-----------HHHHHHHH-HH-
Confidence 99975432111010 000000 0 00011110000 000000 000000 00011100 00
Q ss_pred hhHHhhhcCCCCCCCCCCeEEEecCCCCCCChh---HHHHHHhcCCCceeEEEeCCCCCCCCCC-ChHHHHHHHHHHH
Q 026228 164 DISSRIGAGFSSGSWDKPVLVAWGISDKYLPQS---VAEEFQKGNPNVVKLQMIEGAGHMPQED-WPEKVVDGLRYFF 237 (241)
Q Consensus 164 ~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~---~~~~~~~~~~~~~~~~~i~~agH~~~~e-~p~~~~~~l~~fl 237 (241)
....+.. ......-.+|.++.+...|+..... ....+.+..++..+++.++ ++|+..++ +..++++.|.++|
T Consensus 154 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~-G~H~~~l~~~~~~i~~~I~~~~ 229 (229)
T PF00975_consen 154 QALENYS-IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVP-GDHFSMLKPHVAEIAEKIAEWL 229 (229)
T ss_dssp HHHHTCS--TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEES-SETTGHHSTTHHHHHHHHHHHH
T ss_pred HHHhhcc-CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEc-CCCcEecchHHHHHHHHHhccC
Confidence 0011100 0000011467899999898877554 2334777788767888887 59998886 8889999998876
No 93
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.40 E-value=1.6e-05 Score=65.93 Aligned_cols=60 Identities=22% Similarity=0.198 Sum_probs=41.2
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHH-HHHHHHHHhhc
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKV-VDGLRYFFLNY 240 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~-~~~l~~fl~~~ 240 (241)
+|++|+++-+|-.|+++|+...-..-..++...++++++..||... .++ .+...+||.+|
T Consensus 260 ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~He~~----~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 260 RIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGHEYG----PEFQEDKQLNFLKEH 320 (320)
T ss_dssp G--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--SSTT----HHHHHHHHHHHHHH-
T ss_pred HcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCCCch----hhHHHHHHHHHHhcC
Confidence 5789999999999999999877777777777679999999999654 334 67777788765
No 94
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=98.35 E-value=5.1e-07 Score=80.56 Aligned_cols=79 Identities=15% Similarity=0.106 Sum_probs=55.4
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC----CCCeEEEEeCc-cccHHHHHHHhcCc
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV----KYPFFLVVQGF-LVGSYGLTWALKNP 77 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~----~~~~~lv~~g~-~gG~~~~~~a~~~p 77 (241)
.|+++||.|+++|+||+|.|+...... + ...++|+.++++.+.. +.++.++ |+ +||.+++.+|..+|
T Consensus 48 ~l~~~Gy~vv~~D~RG~g~S~g~~~~~-----~-~~~~~D~~~~i~~l~~q~~~~~~v~~~--G~S~GG~~a~~~a~~~~ 119 (550)
T TIGR00976 48 WFVAQGYAVVIQDTRGRGASEGEFDLL-----G-SDEAADGYDLVDWIAKQPWCDGNVGML--GVSYLAVTQLLAAVLQP 119 (550)
T ss_pred HHHhCCcEEEEEeccccccCCCceEec-----C-cccchHHHHHHHHHHhCCCCCCcEEEE--EeChHHHHHHHHhccCC
Confidence 467789999999999999998754322 1 2345666666665432 2345665 55 46667888899999
Q ss_pred CccCeEEEecCC
Q 026228 78 SRISKLAILNSP 89 (241)
Q Consensus 78 ~~v~~lvl~~~~ 89 (241)
+++++++..++.
T Consensus 120 ~~l~aiv~~~~~ 131 (550)
T TIGR00976 120 PALRAIAPQEGV 131 (550)
T ss_pred CceeEEeecCcc
Confidence 999999877653
No 95
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.30 E-value=2.4e-05 Score=76.73 Aligned_cols=76 Identities=14% Similarity=0.148 Sum_probs=59.6
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhc---CcC
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALK---NPS 78 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~---~p~ 78 (241)
.|.. +++|+++|+||+|.+..+ .++++++++++.+.++++..+.+++++ || +||.+++.+|.+ .|+
T Consensus 1090 ~l~~-~~~v~~~~~~g~~~~~~~-------~~~l~~la~~~~~~i~~~~~~~p~~l~--G~S~Gg~vA~e~A~~l~~~~~ 1159 (1296)
T PRK10252 1090 YLDP-QWSIYGIQSPRPDGPMQT-------ATSLDEVCEAHLATLLEQQPHGPYHLL--GYSLGGTLAQGIAARLRARGE 1159 (1296)
T ss_pred hcCC-CCcEEEEECCCCCCCCCC-------CCCHHHHHHHHHHHHHhhCCCCCEEEE--EechhhHHHHHHHHHHHHcCC
Confidence 3444 699999999999875321 248899999999999987766567776 55 567778888874 688
Q ss_pred ccCeEEEecC
Q 026228 79 RISKLAILNS 88 (241)
Q Consensus 79 ~v~~lvl~~~ 88 (241)
++..++++++
T Consensus 1160 ~v~~l~l~~~ 1169 (1296)
T PRK10252 1160 EVAFLGLLDT 1169 (1296)
T ss_pred ceeEEEEecC
Confidence 9999999986
No 96
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.15 E-value=3.7e-05 Score=61.08 Aligned_cols=64 Identities=25% Similarity=0.371 Sum_probs=47.1
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCC---ceeEEEeCCCCCCCCCCC-----------hHHHHHHHHHHHhhc
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPN---VVKLQMIEGAGHMPQEDW-----------PEKVVDGLRYFFLNY 240 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~---~~~~~~i~~agH~~~~e~-----------p~~~~~~l~~fl~~~ 240 (241)
++.+|+|+++|+.|..+|......+.+.... .+++++++++.|--..+. .+.-.+.+.+||+++
T Consensus 156 ~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~ 233 (236)
T COG0412 156 KIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIYPGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRL 233 (236)
T ss_pred cccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEeCCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999988766555543332 268899999999877553 245566777787664
No 97
>PRK10162 acetyl esterase; Provisional
Probab=98.14 E-value=7e-05 Score=62.31 Aligned_cols=60 Identities=17% Similarity=0.192 Sum_probs=42.1
Q ss_pred CCeEEEecCCCCCCChh--HHHHHHhcCCCceeEEEeCCCCCCCC-----CCChHHHHHHHHHHHhhc
Q 026228 180 KPVLVAWGISDKYLPQS--VAEEFQKGNPNVVKLQMIEGAGHMPQ-----EDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 180 ~P~l~i~G~~D~~~~~~--~~~~~~~~~~~~~~~~~i~~agH~~~-----~e~p~~~~~~l~~fl~~~ 240 (241)
.|+++++|+.|+..+.. ..+.+.+..-. +++++++|..|-.. .+...+..+.+.+||+++
T Consensus 249 Pp~~i~~g~~D~L~de~~~~~~~L~~aGv~-v~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~ 315 (318)
T PRK10162 249 PPCFIAGAEFDPLLDDSRLLYQTLAAHQQP-CEFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQ 315 (318)
T ss_pred CCeEEEecCCCcCcChHHHHHHHHHHcCCC-EEEEEECCCceehhhccCchHHHHHHHHHHHHHHHHH
Confidence 59999999999987532 33444443333 79999999999643 234556777788888664
No 98
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=98.13 E-value=1.1e-05 Score=55.49 Aligned_cols=60 Identities=25% Similarity=0.339 Sum_probs=54.6
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHhh
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
..|+|+|.++.|+..|.+.++.+++.+++ ++++.+++.||......-..+.+++.+||.+
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 58999999999999999999999999998 5999999999999876667889999999964
No 99
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.13 E-value=8.8e-05 Score=58.76 Aligned_cols=59 Identities=19% Similarity=0.147 Sum_probs=44.5
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
++++|+|+..|--|+++|+...-.+.+..++..++++++.-+| ++-|.-.++.+-.|++
T Consensus 257 RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aH---e~~p~~~~~~~~~~l~ 315 (321)
T COG3458 257 RIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAH---EGGPGFQSRQQVHFLK 315 (321)
T ss_pred hhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeecccc---ccCcchhHHHHHHHHH
Confidence 5689999999999999998876666677777668888887665 5556555555555654
No 100
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.10 E-value=0.00023 Score=54.72 Aligned_cols=183 Identities=15% Similarity=0.146 Sum_probs=96.5
Q ss_pred CcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhc---CcCc
Q 026228 4 MSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALK---NPSR 79 (241)
Q Consensus 4 L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~---~p~~ 79 (241)
|.. +++|+++|++|+|.+.... .+.+.+++.+...+.......+++++ || +||.++..++.. .++.
T Consensus 22 l~~-~~~v~~~~~~g~~~~~~~~-------~~~~~~~~~~~~~l~~~~~~~~~~l~--g~s~Gg~~a~~~a~~l~~~~~~ 91 (212)
T smart00824 22 LRG-RRDVSALPLPGFGPGEPLP-------ASADALVEAQAEAVLRAAGGRPFVLV--GHSSGGLLAHAVAARLEARGIP 91 (212)
T ss_pred cCC-CccEEEecCCCCCCCCCCC-------CCHHHHHHHHHHHHHHhcCCCCeEEE--EECHHHHHHHHHHHHHHhCCCC
Confidence 444 5899999999999765432 15567777666555544334456666 55 456667666653 5678
Q ss_pred cCeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhh-CCCCccChhhHhhhhccccCCCCChhHHHHHHH
Q 026228 80 ISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEA-GSPYVLKLDKADVYRLPYLASSGPGFALLEAAR 158 (241)
Q Consensus 80 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (241)
+.+++++++....... ... . .. .....+... ....... ... ....+
T Consensus 92 ~~~l~~~~~~~~~~~~-~~~---~----~~-------~~~~~~~~~~~~~~~~~---------------~~~---~~~~~ 138 (212)
T smart00824 92 PAAVVLLDTYPPGDPA-PEG---W----LP-------ELLRGVFEREDSFVPMD---------------DAR---LTAMG 138 (212)
T ss_pred CcEEEEEccCCCCCcc-chh---h----HH-------HHHHHHHhhhccccccc---------------chh---hhHHH
Confidence 9999888763321100 000 0 00 000111100 0000000 000 00000
Q ss_pred hcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCC-ChhHHHHHHhcCCCceeEEEeCCCCCCCC-CCChHHHHHHHHHH
Q 026228 159 KVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYL-PQSVAEEFQKGNPNVVKLQMIEGAGHMPQ-EDWPEKVVDGLRYF 236 (241)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~-~~~~~~~~~~~~~~~~~~~~i~~agH~~~-~e~p~~~~~~l~~f 236 (241)
.... +...+....+++|+.++.|++|... +......+.+......+++.++ ++|+.. .+++..+.+.+..|
T Consensus 139 -----~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~~-g~H~~~~~~~~~~~~~~~~~~ 211 (212)
T smart00824 139 -----AYLR-LFGGWTPGPVAAPTLLVRASEPLAEWPDEDPDGWRAHWPLPHTVVDVP-GDHFTMMEEHAAATARAVHDW 211 (212)
T ss_pred -----HHHH-HhccCCCCCCCCCEEEEeccCCCCCCCCCCcccccCCCCCCceeEEcc-CchHHHHHHhHHHHHHHHHhh
Confidence 0000 0111223467899999999998654 2233344555555556888887 578765 56777777777655
No 101
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.05 E-value=6.1e-06 Score=71.08 Aligned_cols=84 Identities=12% Similarity=0.221 Sum_probs=56.7
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCc--
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSR-- 79 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~-- 79 (241)
+.|.+.||.+ ..||+|+|.+.+..... ....+++.+.|.++.++.+.. ++++||| +|||.++..++..+|+.
T Consensus 115 ~~L~~~GY~~-~~dL~g~gYDwR~~~~~---~~~~~~Lk~lIe~~~~~~g~~-kV~LVGH-SMGGlva~~fl~~~p~~~~ 188 (440)
T PLN02733 115 EQLIKWGYKE-GKTLFGFGYDFRQSNRL---PETMDGLKKKLETVYKASGGK-KVNIISH-SMGGLLVKCFMSLHSDVFE 188 (440)
T ss_pred HHHHHcCCcc-CCCcccCCCCccccccH---HHHHHHHHHHHHHHHHHcCCC-CEEEEEE-CHhHHHHHHHHHHCCHhHH
Confidence 4577778644 89999999998754211 112455666666666666665 4677743 25666777788888864
Q ss_pred --cCeEEEecCCCC
Q 026228 80 --ISKLAILNSPLT 91 (241)
Q Consensus 80 --v~~lvl~~~~~~ 91 (241)
|+++|.+++|..
T Consensus 189 k~I~~~I~la~P~~ 202 (440)
T PLN02733 189 KYVNSWIAIAAPFQ 202 (440)
T ss_pred hHhccEEEECCCCC
Confidence 788999988764
No 102
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=97.99 E-value=0.0003 Score=59.31 Aligned_cols=48 Identities=25% Similarity=0.310 Sum_probs=37.6
Q ss_pred CCCCCeEEEecCCCCCCChhHH-HHHHhcCCCceeEEEeCCCCCCCCCCC
Q 026228 177 SWDKPVLVAWGISDKYLPQSVA-EEFQKGNPNVVKLQMIEGAGHMPQEDW 225 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~-~~~~~~~~~~~~~~~i~~agH~~~~e~ 225 (241)
.|.+|+|.|...+|+++|++.+ ....+.+|+ +=+++-...||.-.+|.
T Consensus 320 ~I~VP~L~ina~DDPv~p~~~ip~~~~~~np~-v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 320 KIKVPLLCINAADDPVVPEEAIPIDDIKSNPN-VLLVITSHGGHLGFLEG 368 (409)
T ss_pred cccccEEEEecCCCCCCCcccCCHHHHhcCCc-EEEEEeCCCceeeeecc
Confidence 6899999999999999988544 334456776 45666688999988887
No 103
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=97.85 E-value=3.2e-05 Score=70.68 Aligned_cols=71 Identities=15% Similarity=0.085 Sum_probs=47.0
Q ss_pred CCcCCCceEEeeCCCCCCCCCCC---------CCCCCCC---------CCCHHHHHHHHHHHHHHcC-------------
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKP---------EKGYDDF---------DFTENEFHEELDKLLDVLE------------- 51 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p---------~~~~~~~---------~~~~~~~a~~l~~~l~~l~------------- 51 (241)
.|+++||+||++|+||||+|+.. ......| ...+++++.|+..++..++
T Consensus 471 ~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~ 550 (792)
T TIGR03502 471 TLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGIN 550 (792)
T ss_pred HHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHHHHHHHhccccccccccccc
Confidence 56777999999999999999443 1110011 1267889999999999887
Q ss_pred -C-CCCeEEEEeCcccc-HHHHHHHhc
Q 026228 52 -V-KYPFFLVVQGFLVG-SYGLTWALK 75 (241)
Q Consensus 52 -~-~~~~~lv~~g~~gG-~~~~~~a~~ 75 (241)
+ ..+++++ |||+| .++..++..
T Consensus 551 ~~~~~~V~~l--GHSLGgiig~~~~~~ 575 (792)
T TIGR03502 551 VIDGSKVSFL--GHSLGGIVGTSFIAY 575 (792)
T ss_pred CCCCCcEEEE--ecCHHHHHHHHHHHh
Confidence 1 1245666 66554 556666654
No 104
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.84 E-value=7e-05 Score=58.48 Aligned_cols=82 Identities=13% Similarity=0.105 Sum_probs=49.4
Q ss_pred CCCceEEeeCCCCCCCCCCCCCCCC-----CCCCCHHHHHHHHHHHHHHcCCC-CCeEEEEeCcc-ccHHHHHHHhcCcC
Q 026228 6 DAGFHCFAPDWLGFGFSDKPEKGYD-----DFDFTENEFHEELDKLLDVLEVK-YPFFLVVQGFL-VGSYGLTWALKNPS 78 (241)
Q Consensus 6 ~~~~~via~Dl~G~G~S~~p~~~~~-----~~~~~~~~~a~~l~~~l~~l~~~-~~~~lv~~g~~-gG~~~~~~a~~~p~ 78 (241)
+.||.|++||.+|+|.+.....-+. .......++.+.+..+.++.+++ +++.++ |+| ||.+++.+++.+|+
T Consensus 41 ~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~~i~l~--G~S~Gg~~a~~~a~~~p~ 118 (212)
T TIGR01840 41 RYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPNRVYVT--GLSAGGGMTAVLGCTYPD 118 (212)
T ss_pred hCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChhheEEE--EECHHHHHHHHHHHhCch
Confidence 4689999999999986542110000 00011233334444444454554 245554 554 56678899999999
Q ss_pred ccCeEEEecCC
Q 026228 79 RISKLAILNSP 89 (241)
Q Consensus 79 ~v~~lvl~~~~ 89 (241)
++++++.++++
T Consensus 119 ~~~~~~~~~g~ 129 (212)
T TIGR01840 119 VFAGGASNAGL 129 (212)
T ss_pred hheEEEeecCC
Confidence 99998887754
No 105
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.76 E-value=0.001 Score=52.20 Aligned_cols=181 Identities=19% Similarity=0.188 Sum_probs=73.2
Q ss_pred CCcCCCceEEeeCCCCC-CCCCCCCCCCCCCCCCHHHHHHHHH---HHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcC
Q 026228 3 QMSDAGFHCFAPDWLGF-GFSDKPEKGYDDFDFTENEFHEELD---KLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPS 78 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~-G~S~~p~~~~~~~~~~~~~~a~~l~---~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~ 78 (241)
.|+..||+||.+|-.-| |.|+..-. .++++...+++. +|++..|+++ .-||+. +..|-+|+..|. .+
T Consensus 52 YL~~NGFhViRyDsl~HvGlSsG~I~-----eftms~g~~sL~~V~dwl~~~g~~~-~GLIAa-SLSaRIAy~Va~-~i- 122 (294)
T PF02273_consen 52 YLSANGFHVIRYDSLNHVGLSSGDIN-----EFTMSIGKASLLTVIDWLATRGIRR-IGLIAA-SLSARIAYEVAA-DI- 122 (294)
T ss_dssp HHHTTT--EEEE---B------------------HHHHHHHHHHHHHHHHHTT----EEEEEE-TTHHHHHHHHTT-TS-
T ss_pred HHhhCCeEEEeccccccccCCCCChh-----hcchHHhHHHHHHHHHHHHhcCCCc-chhhhh-hhhHHHHHHHhh-cc-
Confidence 57778999999999988 99987543 246655555544 6667778775 566653 245667777666 34
Q ss_pred ccCeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhC-CCCccChhhHhhhhccccCCCCChh-HHHHH
Q 026228 79 RISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAG-SPYVLKLDKADVYRLPYLASSGPGF-ALLEA 156 (241)
Q Consensus 79 ~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 156 (241)
.++-||.+.+.. .....+ ++-+... ....+...+.+.. +.. ...+. .....
T Consensus 123 ~lsfLitaVGVV-------nlr~TL----------------e~al~~Dyl~~~i~~lp~dld---feG-h~l~~~vFv~d 175 (294)
T PF02273_consen 123 NLSFLITAVGVV-------NLRDTL----------------EKALGYDYLQLPIEQLPEDLD---FEG-HNLGAEVFVTD 175 (294)
T ss_dssp --SEEEEES--S--------HHHHH----------------HHHHSS-GGGS-GGG--SEEE---ETT-EEEEHHHHHHH
T ss_pred CcceEEEEeeee-------eHHHHH----------------HHHhccchhhcchhhCCCccc---ccc-cccchHHHHHH
Confidence 477776665321 111111 0000000 0000000000000 000 00011 11111
Q ss_pred HHhcCh---hhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhc-CCCceeEEEeCCCCCCCCCCCh
Q 026228 157 ARKVNF---KDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKG-NPNVVKLQMIEGAGHMPQEDWP 226 (241)
Q Consensus 157 ~~~~~~---~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~-~~~~~~~~~i~~agH~~~~e~p 226 (241)
..+.++ .....++ +++++|...+.+++|.++.+.....+... .++..++..++|++|-.. |+|
T Consensus 176 c~e~~w~~l~ST~~~~------k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~HdL~-enl 242 (294)
T PF02273_consen 176 CFEHGWDDLDSTINDM------KRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSSHDLG-ENL 242 (294)
T ss_dssp HHHTT-SSHHHHHHHH------TT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-SS-TT-SSH
T ss_pred HHHcCCccchhHHHHH------hhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCccchhh-hCh
Confidence 111122 2223332 36799999999999999988766666653 444568999999999865 444
No 106
>PRK10115 protease 2; Provisional
Probab=97.72 E-value=0.00039 Score=63.70 Aligned_cols=84 Identities=17% Similarity=0.061 Sum_probs=49.2
Q ss_pred CCcCCCceEEeeCCCCCCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCcc-ccHHHHHHHhcCcC
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKP---EKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFL-VGSYGLTWALKNPS 78 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p---~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~-gG~~~~~~a~~~p~ 78 (241)
.|+++||-|+.+..||=|.=++. ........-+++++.+.+..++++ |+-++--|.+.|.| ||.++...+.++|+
T Consensus 469 ~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~-g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd 547 (686)
T PRK10115 469 SLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKL-GYGSPSLCYGMGGSAGGMLMGVAINQRPE 547 (686)
T ss_pred HHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHc-CCCChHHeEEEEECHHHHHHHHHHhcChh
Confidence 46778999999999996543321 100001123677777777777655 64322222223444 44444445557899
Q ss_pred ccCeEEEec
Q 026228 79 RISKLAILN 87 (241)
Q Consensus 79 ~v~~lvl~~ 87 (241)
+++.+|...
T Consensus 548 lf~A~v~~v 556 (686)
T PRK10115 548 LFHGVIAQV 556 (686)
T ss_pred heeEEEecC
Confidence 999886654
No 107
>COG0400 Predicted esterase [General function prediction only]
Probab=97.71 E-value=0.0003 Score=54.51 Aligned_cols=119 Identities=22% Similarity=0.338 Sum_probs=77.9
Q ss_pred HHHHHHHHHHHHHcCCCC-CeEEEEeCcc-ccHHHHHHHhcCcCccCeEEEecCCCCCCCCcchHHhhhccchhhhhhhh
Q 026228 37 NEFHEELDKLLDVLEVKY-PFFLVVQGFL-VGSYGLTWALKNPSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQ 114 (241)
Q Consensus 37 ~~~a~~l~~~l~~l~~~~-~~~lv~~g~~-gG~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (241)
+.+++.|.++.++.+++. .+++ .|+| |+++++...+++|+.+++++++++....
T Consensus 81 ~~~~~~l~~~~~~~gi~~~~ii~--~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~---------------------- 136 (207)
T COG0400 81 EKLAEFLEELAEEYGIDSSRIIL--IGFSQGANIALSLGLTLPGLFAGAILFSGMLPL---------------------- 136 (207)
T ss_pred HHHHHHHHHHHHHhCCChhheEE--EecChHHHHHHHHHHhCchhhccchhcCCcCCC----------------------
Confidence 457777788888888842 2333 4886 5567889999999999998887642100
Q ss_pred hHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCC
Q 026228 115 NAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLP 194 (241)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~ 194 (241)
... .. + + .-.+|+++++|+.|+++|
T Consensus 137 ------------~~~--~~---------------~-----------~---------------~~~~pill~hG~~Dpvvp 161 (207)
T COG0400 137 ------------EPE--LL---------------P-----------D---------------LAGTPILLSHGTEDPVVP 161 (207)
T ss_pred ------------CCc--cc---------------c-----------c---------------cCCCeEEEeccCcCCccC
Confidence 000 00 0 0 115799999999999998
Q ss_pred hhHHHHHHhc---CCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHhh
Q 026228 195 QSVAEEFQKG---NPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 195 ~~~~~~~~~~---~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
...+.++.+. ....++.+.++ .||.+..|.= +.+.+|+.+
T Consensus 162 ~~~~~~l~~~l~~~g~~v~~~~~~-~GH~i~~e~~----~~~~~wl~~ 204 (207)
T COG0400 162 LALAEALAEYLTASGADVEVRWHE-GGHEIPPEEL----EAARSWLAN 204 (207)
T ss_pred HHHHHHHHHHHHHcCCCEEEEEec-CCCcCCHHHH----HHHHHHHHh
Confidence 8766555432 22346888888 8999876644 444456643
No 108
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=97.69 E-value=0.00019 Score=54.13 Aligned_cols=46 Identities=22% Similarity=0.304 Sum_probs=36.7
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCCh
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWP 226 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p 226 (241)
.+|.++|.+++|+++|.+.+..+++... ++++.++++||+-..+-=
T Consensus 114 ~~~~~viaS~nDp~vp~~~a~~~A~~l~--a~~~~~~~~GHf~~~~G~ 159 (171)
T PF06821_consen 114 PFPSIVIASDNDPYVPFERAQRLAQRLG--AELIILGGGGHFNAASGF 159 (171)
T ss_dssp HCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TTSSGGGTH
T ss_pred CCCeEEEEcCCCCccCHHHHHHHHHHcC--CCeEECCCCCCcccccCC
Confidence 4677999999999999999999998774 589999999999765443
No 109
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=97.68 E-value=0.00021 Score=58.17 Aligned_cols=62 Identities=24% Similarity=0.316 Sum_probs=9.4
Q ss_pred CCCCCeEEEecCCCCCCChhH-----HHHHHhcCCCc---eeEEEeCCCCCCCCCCChH----HHHHHHHHHHh
Q 026228 177 SWDKPVLVAWGISDKYLPQSV-----AEEFQKGNPNV---VKLQMIEGAGHMPQEDWPE----KVVDGLRYFFL 238 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~-----~~~~~~~~~~~---~~~~~i~~agH~~~~e~p~----~~~~~l~~fl~ 238 (241)
++++|+|++.++.|..+|..+ .+++.+..+.. ....+||||.|.+-.+..+ .+.+.|..||+
T Consensus 230 ~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 230 KVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNPKIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp G--S-EEEEEE--TT-----------------------------------------------------------
T ss_pred cCCCceEEEecCCCceecccccccccccccccccccccccccccccccccccccccccccccccccccccccCC
Confidence 678899999999999997632 23444433321 1345899999998754433 46677777764
No 110
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.67 E-value=0.00011 Score=57.53 Aligned_cols=45 Identities=33% Similarity=0.535 Sum_probs=25.1
Q ss_pred CCCCCeEEEecCCCCCCChh-HHHH----HHh-cCCCceeEEEeCCCCCCC
Q 026228 177 SWDKPVLVAWGISDKYLPQS-VAEE----FQK-GNPNVVKLQMIEGAGHMP 221 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~-~~~~----~~~-~~~~~~~~~~i~~agH~~ 221 (241)
++++|+|+|.|++|...|-. +++. +.+ ..+...+...++++||++
T Consensus 113 ~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH~i 163 (213)
T PF08840_consen 113 KIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGHLI 163 (213)
T ss_dssp G--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S--
T ss_pred HcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCcee
Confidence 67899999999999998754 3332 322 233246888899999995
No 111
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.61 E-value=0.0014 Score=53.85 Aligned_cols=46 Identities=22% Similarity=0.347 Sum_probs=34.5
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHH----hcCCCceeEEEeCCCCCCCC
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQ----KGNPNVVKLQMIEGAGHMPQ 222 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~----~~~~~~~~~~~i~~agH~~~ 222 (241)
.-++|+++.+|..|.++|......+. +.-..+++++.+++.+|...
T Consensus 217 ~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 217 TPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 34789999999999999987665544 33312368888899999864
No 112
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=97.48 E-value=0.0046 Score=51.31 Aligned_cols=57 Identities=18% Similarity=0.274 Sum_probs=48.7
Q ss_pred CCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCC-CCChHHHHHHHHHHHh
Q 026228 180 KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQ-EDWPEKVVDGLRYFFL 238 (241)
Q Consensus 180 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~-~e~p~~~~~~l~~fl~ 238 (241)
-.+.++.+++|..+|......+.+.-|+ +++..+++ ||..- +-+.+.|.++|.+-|.
T Consensus 290 ~~ii~V~A~~DaYVPr~~v~~Lq~~WPG-sEvR~l~g-GHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 290 SAIIFVAAKNDAYVPRHGVLSLQEIWPG-SEVRYLPG-GHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred CcEEEEEecCceEechhhcchHHHhCCC-CeEEEecC-CcEEEeeechHHHHHHHHHHhh
Confidence 3588999999999999888899999998 59999987 99954 6778899999988764
No 113
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=97.41 E-value=0.0075 Score=48.86 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=56.8
Q ss_pred CCceEEeeCCCCCCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHcCC-----CCCeEEEEeCccccH-HHHHHHhcCc--
Q 026228 7 AGFHCFAPDWLGFGFSDKPEK-GYDDFDFTENEFHEELDKLLDVLEV-----KYPFFLVVQGFLVGS-YGLTWALKNP-- 77 (241)
Q Consensus 7 ~~~~via~Dl~G~G~S~~p~~-~~~~~~~~~~~~a~~l~~~l~~l~~-----~~~~~lv~~g~~gG~-~~~~~a~~~p-- 77 (241)
.+|.|+++...||-.++.... ..+...|++++..+--.++++++-. ..+++++ |||.|+ +++++..+.|
T Consensus 31 ~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~~liLi--GHSIGayi~levl~r~~~~ 108 (266)
T PF10230_consen 31 PQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKPNVKLILI--GHSIGAYIALEVLKRLPDL 108 (266)
T ss_pred CCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCCCCcEEEE--eCcHHHHHHHHHHHhcccc
Confidence 369999999999988776511 0112357888777777777776543 2345554 777776 5788888888
Q ss_pred -CccCeEEEecCCC
Q 026228 78 -SRISKLAILNSPL 90 (241)
Q Consensus 78 -~~v~~lvl~~~~~ 90 (241)
.+|.+++++-+..
T Consensus 109 ~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 109 KFRVKKVILLFPTI 122 (266)
T ss_pred CCceeEEEEeCCcc
Confidence 7899988886543
No 114
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=97.34 E-value=0.00054 Score=52.79 Aligned_cols=60 Identities=17% Similarity=0.328 Sum_probs=48.9
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHhhc
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~~ 240 (241)
.+++|+|.|.|+.|+++|...+..+.+.+++. +++.-..||+++-.+ ...+.+.+||..+
T Consensus 161 ~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a--~vl~HpggH~VP~~~--~~~~~i~~fi~~~ 220 (230)
T KOG2551|consen 161 PLSTPSLHIFGETDTIVPSERSEQLAESFKDA--TVLEHPGGHIVPNKA--KYKEKIADFIQSF 220 (230)
T ss_pred CCCCCeeEEecccceeecchHHHHHHHhcCCC--eEEecCCCccCCCch--HHHHHHHHHHHHH
Confidence 68999999999999999999999999999984 455567899998766 4556667776543
No 115
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=97.34 E-value=0.0072 Score=44.43 Aligned_cols=157 Identities=17% Similarity=0.234 Sum_probs=91.3
Q ss_pred CCcCCCceEEeeCCCC-----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcC
Q 026228 3 QMSDAGFHCFAPDWLG-----FGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKN 76 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G-----~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~ 76 (241)
.|+.+|+.|..+.+|= .|. .+|++.. ... ...+...++++.+.+.-. + .++ +|+ |||-++...|..-
T Consensus 38 ~la~~G~~vaRfefpYma~Rrtg~-rkPp~~~--~t~-~~~~~~~~aql~~~l~~g-p-Li~-GGkSmGGR~aSmvade~ 110 (213)
T COG3571 38 ALARRGWLVARFEFPYMAARRTGR-RKPPPGS--GTL-NPEYIVAIAQLRAGLAEG-P-LII-GGKSMGGRVASMVADEL 110 (213)
T ss_pred HHHhCceeEEEeecchhhhccccC-CCCcCcc--ccC-CHHHHHHHHHHHhcccCC-c-eee-ccccccchHHHHHHHhh
Confidence 5677899999988762 231 2343322 111 245777888887776543 4 334 466 5666665554432
Q ss_pred cCccCeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHH
Q 026228 77 PSRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEA 156 (241)
Q Consensus 77 p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (241)
.-.|..|++++=|+.++.. ..++|
T Consensus 111 ~A~i~~L~clgYPfhppGK----Pe~~R---------------------------------------------------- 134 (213)
T COG3571 111 QAPIDGLVCLGYPFHPPGK----PEQLR---------------------------------------------------- 134 (213)
T ss_pred cCCcceEEEecCccCCCCC----cccch----------------------------------------------------
Confidence 2229999888655432110 00000
Q ss_pred HHhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCC----------CCCh
Q 026228 157 ARKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQ----------EDWP 226 (241)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~----------~e~p 226 (241)
. ..+ ..+.+|+|+.+|+.|+.-+.+....+. +++..+++.++++.|-.- .++=
T Consensus 135 --t----~HL---------~gl~tPtli~qGtrD~fGtr~~Va~y~--ls~~iev~wl~~adHDLkp~k~vsgls~~~hL 197 (213)
T COG3571 135 --T----EHL---------TGLKTPTLITQGTRDEFGTRDEVAGYA--LSDPIEVVWLEDADHDLKPRKLVSGLSTADHL 197 (213)
T ss_pred --h----hhc---------cCCCCCeEEeecccccccCHHHHHhhh--cCCceEEEEeccCccccccccccccccHHHHH
Confidence 0 000 135799999999999988776655443 344479999999998642 2333
Q ss_pred HHHHHHHHHHHhh
Q 026228 227 EKVVDGLRYFFLN 239 (241)
Q Consensus 227 ~~~~~~l~~fl~~ 239 (241)
...++.|..|+..
T Consensus 198 ~~~A~~va~~~~~ 210 (213)
T COG3571 198 KTLAEQVAGWARR 210 (213)
T ss_pred HHHHHHHHHHHhh
Confidence 4455666666543
No 116
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=97.16 E-value=0.034 Score=42.54 Aligned_cols=53 Identities=23% Similarity=0.146 Sum_probs=36.2
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHH
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 237 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl 237 (241)
..+++++.|+.|.+++...+ ... ..+. ..++.+|.+|-.. +=++....|.+|+
T Consensus 134 ~~~~lvll~~~DEvLd~~~a--~~~-~~~~-~~~i~~ggdH~f~--~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 134 PERYLVLLQTGDEVLDYREA--VAK-YRGC-AQIIEEGGDHSFQ--DFEEYLPQIIAFL 186 (187)
T ss_pred CccEEEEEecCCcccCHHHH--HHH-hcCc-eEEEEeCCCCCCc--cHHHHHHHHHHhh
Confidence 56999999999999987433 223 3343 4456678899844 4556666777776
No 117
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.01 E-value=0.0019 Score=54.14 Aligned_cols=83 Identities=24% Similarity=0.326 Sum_probs=40.4
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHH------------------HHHHHHHcC-CCCCeEEEEeCc
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEE------------------LDKLLDVLE-VKYPFFLVVQGF 63 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~------------------l~~~l~~l~-~~~~~~lv~~g~ 63 (241)
.|+.+||-|+++|.+|+|+............++...++.. +.+|++.+. +++. -+...|+
T Consensus 155 ~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~-RIG~~Gf 233 (390)
T PF12715_consen 155 QLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPD-RIGCMGF 233 (390)
T ss_dssp HHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEE-EEEEEEE
T ss_pred HHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCcc-ceEEEee
Confidence 4788999999999999999765442111122332222221 123333332 1211 2222488
Q ss_pred cccHH-HHHHHhcCcCccCeEEEec
Q 026228 64 LVGSY-GLTWALKNPSRISKLAILN 87 (241)
Q Consensus 64 ~gG~~-~~~~a~~~p~~v~~lvl~~ 87 (241)
|||+. ++.+|+..+ +|+..|..+
T Consensus 234 SmGg~~a~~LaALDd-RIka~v~~~ 257 (390)
T PF12715_consen 234 SMGGYRAWWLAALDD-RIKATVANG 257 (390)
T ss_dssp GGGHHHHHHHHHH-T-T--EEEEES
T ss_pred cccHHHHHHHHHcch-hhHhHhhhh
Confidence 77765 777777655 787665543
No 118
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=96.97 E-value=0.0029 Score=52.07 Aligned_cols=76 Identities=13% Similarity=0.245 Sum_probs=48.6
Q ss_pred cCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH-HHHcCCCCCeEEEEeCccccHHHHH-HHhcCcCccCe
Q 026228 5 SDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKL-LDVLEVKYPFFLVVQGFLVGSYGLT-WALKNPSRISK 82 (241)
Q Consensus 5 ~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~-l~~l~~~~~~~lv~~g~~gG~~~~~-~a~~~p~~v~~ 82 (241)
++.||.|..+..|||+.|...+-+. ....-++.+.+| +..||.... .+|.=|||-|++... .|..||| |++
T Consensus 265 ~~lgYsvLGwNhPGFagSTG~P~p~-----n~~nA~DaVvQfAI~~Lgf~~e-dIilygWSIGGF~~~waAs~YPd-Vka 337 (517)
T KOG1553|consen 265 AQLGYSVLGWNHPGFAGSTGLPYPV-----NTLNAADAVVQFAIQVLGFRQE-DIILYGWSIGGFPVAWAASNYPD-VKA 337 (517)
T ss_pred HHhCceeeccCCCCccccCCCCCcc-----cchHHHHHHHHHHHHHcCCCcc-ceEEEEeecCCchHHHHhhcCCC-ceE
Confidence 3568999999999999998654322 223344555544 567887532 223348976666444 4568996 888
Q ss_pred EEEec
Q 026228 83 LAILN 87 (241)
Q Consensus 83 lvl~~ 87 (241)
+||-.
T Consensus 338 vvLDA 342 (517)
T KOG1553|consen 338 VVLDA 342 (517)
T ss_pred EEeec
Confidence 76544
No 119
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=96.96 E-value=0.024 Score=42.29 Aligned_cols=60 Identities=23% Similarity=0.330 Sum_probs=45.4
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCC----CChHHHHHHHHHHHhh
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQE----DWPEKVVDGLRYFFLN 239 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~----e~p~~~~~~l~~fl~~ 239 (241)
++..|.+++..++|++++.+.++.+++.... .++.+.++||+--. +-|+ ....+..|+.+
T Consensus 115 ~lpfps~vvaSrnDp~~~~~~a~~~a~~wgs--~lv~~g~~GHiN~~sG~g~wpe-g~~~l~~~~s~ 178 (181)
T COG3545 115 PLPFPSVVVASRNDPYVSYEHAEDLANAWGS--ALVDVGEGGHINAESGFGPWPE-GYALLAQLLSR 178 (181)
T ss_pred cCCCceeEEEecCCCCCCHHHHHHHHHhccH--hheecccccccchhhcCCCcHH-HHHHHHHHhhh
Confidence 4567999999999999999999999988874 68888899998542 3333 44556665543
No 120
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=96.91 E-value=0.0013 Score=53.50 Aligned_cols=81 Identities=12% Similarity=0.058 Sum_probs=47.4
Q ss_pred CcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCC-CeEEEEeCcc-ccHHHHHHHhcCcCccC
Q 026228 4 MSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKY-PFFLVVQGFL-VGSYGLTWALKNPSRIS 81 (241)
Q Consensus 4 L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~-~~~lv~~g~~-gG~~~~~~a~~~p~~v~ 81 (241)
++++||-||..|.||.|.|+...... ......=..++.+|+.+..... ++-++ |.| +|...+..|...|.+++
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~~~~~---~~~e~~D~~d~I~W~~~Qpws~G~VGm~--G~SY~G~~q~~~A~~~~p~Lk 127 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGEFDPM---SPNEAQDGYDTIEWIAAQPWSNGKVGMY--GISYGGFTQWAAAARRPPHLK 127 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S-B-TT---SHHHHHHHHHHHHHHHHCTTEEEEEEEE--EETHHHHHHHHHHTTT-TTEE
T ss_pred HHhCCCEEEEECCcccccCCCccccC---ChhHHHHHHHHHHHHHhCCCCCCeEEee--ccCHHHHHHHHHHhcCCCCce
Confidence 67889999999999999998754321 0111223346667777765432 33333 333 44456667778999999
Q ss_pred eEEEecCC
Q 026228 82 KLAILNSP 89 (241)
Q Consensus 82 ~lvl~~~~ 89 (241)
.++...+.
T Consensus 128 Ai~p~~~~ 135 (272)
T PF02129_consen 128 AIVPQSGW 135 (272)
T ss_dssp EEEEESE-
T ss_pred EEEecccC
Confidence 98877653
No 121
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.78 E-value=0.0099 Score=47.68 Aligned_cols=78 Identities=13% Similarity=0.282 Sum_probs=58.9
Q ss_pred CcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCcc-ccHHHHHHHh--cCc-Cc
Q 026228 4 MSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFL-VGSYGLTWAL--KNP-SR 79 (241)
Q Consensus 4 L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~-gG~~~~~~a~--~~p-~~ 79 (241)
|... ..|++.+-||+|.-..+. -+++++++...+-|.++.-+-+++|+ ||| ||.+++.+|. ... +.
T Consensus 23 l~~~-~~v~~l~a~g~~~~~~~~-------~~l~~~a~~yv~~Ir~~QP~GPy~L~--G~S~GG~vA~evA~qL~~~G~~ 92 (257)
T COG3319 23 LGPL-LPVYGLQAPGYGAGEQPF-------ASLDDMAAAYVAAIRRVQPEGPYVLL--GWSLGGAVAFEVAAQLEAQGEE 92 (257)
T ss_pred hccC-ceeeccccCccccccccc-------CCHHHHHHHHHHHHHHhCCCCCEEEE--eeccccHHHHHHHHHHHhCCCe
Confidence 3443 789999999999744432 27899999999999888877788876 774 6778887765 233 47
Q ss_pred cCeEEEecCCCC
Q 026228 80 ISKLAILNSPLT 91 (241)
Q Consensus 80 v~~lvl~~~~~~ 91 (241)
|+.|++++++..
T Consensus 93 Va~L~llD~~~~ 104 (257)
T COG3319 93 VAFLGLLDAVPP 104 (257)
T ss_pred EEEEEEeccCCC
Confidence 999999998643
No 122
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=96.57 E-value=0.0052 Score=53.76 Aligned_cols=61 Identities=18% Similarity=0.128 Sum_probs=46.7
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcCC-----------------------------C-----ceeEEEeCCCCCCCCCC
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGNP-----------------------------N-----VVKLQMIEGAGHMPQED 224 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----------------------------~-----~~~~~~i~~agH~~~~e 224 (241)
.+++|+..|+.|.+++....+.+.+.+. + +.+++.+.+|||+++.|
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 4899999999998887644433332111 1 35667788999999999
Q ss_pred ChHHHHHHHHHHHhh
Q 026228 225 WPEKVVDGLRYFFLN 239 (241)
Q Consensus 225 ~p~~~~~~l~~fl~~ 239 (241)
+|+.+.+++..|+..
T Consensus 444 ~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 QPAVALTMINRFLRN 458 (462)
T ss_pred HHHHHHHHHHHHHcC
Confidence 999999999999853
No 123
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=96.50 E-value=0.0066 Score=53.86 Aligned_cols=188 Identities=15% Similarity=0.146 Sum_probs=106.5
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCcc-ccHHHHHHHhcCc
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYD---DFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFL-VGSYGLTWALKNP 77 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~---~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~-gG~~~~~~a~~~p 77 (241)
..|+..||-|+.+|.||-..-+..-.+.- --...+++.++-+.-+.++.|.-+.-.+..|||| ||-+++..-+++|
T Consensus 670 ~~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P 749 (867)
T KOG2281|consen 670 CRLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYP 749 (867)
T ss_pred hhhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCc
Confidence 35788999999999999655432211000 0012457888889999999986544445558995 6666778788999
Q ss_pred CccCeEEEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHH
Q 026228 78 SRISKLAILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAA 157 (241)
Q Consensus 78 ~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (241)
+-++- .+.++|++. |..... .+ .+++.. .| +.++..|.. + .+..
T Consensus 750 ~Ifrv-AIAGapVT~-------W~~YDT----gY-------TERYMg--~P----~~nE~gY~a--------g-SV~~-- 793 (867)
T KOG2281|consen 750 NIFRV-AIAGAPVTD-------WRLYDT----GY-------TERYMG--YP----DNNEHGYGA--------G-SVAG-- 793 (867)
T ss_pred ceeeE-EeccCccee-------eeeecc----cc-------hhhhcC--CC----ccchhcccc--------h-hHHH--
Confidence 87774 455554431 110000 00 122211 11 011111100 0 0000
Q ss_pred HhcChhhhHHhhhcCCCCCCCCCCeEEEecCCCCCCChhHH----HHHHhcCCCceeEEEeCCCCCCCC-CCChHHHHHH
Q 026228 158 RKVNFKDISSRIGAGFSSGSWDKPVLVAWGISDKYLPQSVA----EEFQKGNPNVVKLQMIEGAGHMPQ-EDWPEKVVDG 232 (241)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~----~~~~~~~~~~~~~~~i~~agH~~~-~e~p~~~~~~ 232 (241)
...++. .=+.-.|++||--|..+.-... ..+.+.... .+++++|+-.|.+- .|.-+-.-..
T Consensus 794 -------~Veklp------depnRLlLvHGliDENVHF~Hts~Lvs~lvkagKp-yeL~IfP~ERHsiR~~es~~~yE~r 859 (867)
T KOG2281|consen 794 -------HVEKLP------DEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKP-YELQIFPNERHSIRNPESGIYYEAR 859 (867)
T ss_pred -------HHhhCC------CCCceEEEEecccccchhhhhHHHHHHHHHhCCCc-eEEEEccccccccCCCccchhHHHH
Confidence 011111 1133589999999998854333 333444444 69999999999976 4666666777
Q ss_pred HHHHHhh
Q 026228 233 LRYFFLN 239 (241)
Q Consensus 233 l~~fl~~ 239 (241)
|..|+++
T Consensus 860 ll~FlQ~ 866 (867)
T KOG2281|consen 860 LLHFLQE 866 (867)
T ss_pred HHHHHhh
Confidence 8888865
No 124
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=96.50 E-value=0.085 Score=44.61 Aligned_cols=60 Identities=20% Similarity=0.307 Sum_probs=51.0
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHhh
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
++++|.++|-|..|..+.++....+-..+|+...+..+|+++|..-. ..+.+.|..|+..
T Consensus 260 rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~---~~~~~~l~~f~~~ 319 (367)
T PF10142_consen 260 RLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG---SDVVQSLRAFYNR 319 (367)
T ss_pred hcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch---HHHHHHHHHHHHH
Confidence 56899999999999999999888888889987789999999999766 5566677777753
No 125
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=96.23 E-value=0.092 Score=42.20 Aligned_cols=58 Identities=22% Similarity=0.269 Sum_probs=43.4
Q ss_pred CCCeEEEecC------CCCCCChhHHHHHHhcCCC---ceeEEEeCC--CCCCCCCCChHHHHHHHHHHH
Q 026228 179 DKPVLVAWGI------SDKYLPQSVAEEFQKGNPN---VVKLQMIEG--AGHMPQEDWPEKVVDGLRYFF 237 (241)
Q Consensus 179 ~~P~l~i~G~------~D~~~~~~~~~~~~~~~~~---~~~~~~i~~--agH~~~~e~p~~~~~~l~~fl 237 (241)
++.+|-|.|. .|..+|...+..+.-++.+ ..+-.+|.| +.|.-..|+|+ |.+.|..||
T Consensus 184 ~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~~a~HS~LheN~~-V~~~I~~FL 252 (255)
T PF06028_consen 184 NIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGKDAQHSQLHENPQ-VDKLIIQFL 252 (255)
T ss_dssp T-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESGGGSCCGGGCCHH-HHHHHHHHH
T ss_pred CeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECCCCccccCCCCHH-HHHHHHHHh
Confidence 5789999998 7888988777666655543 345566654 68998889885 778999988
No 126
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=96.19 E-value=0.029 Score=43.07 Aligned_cols=48 Identities=8% Similarity=-0.009 Sum_probs=36.7
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCC
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDW 225 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~ 225 (241)
.+++|+|++.|++|..--.+..+.+...... +++.++++.+|+--+|.
T Consensus 205 ~v~~~ilVv~~~~espklieQnrdf~~q~~~-a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 205 DVTVWILVVAAEHESPKLIEQNRDFADQLRK-ASFTLFKNYDHYDIIEE 252 (270)
T ss_pred CceeeeeEeeecccCcHHHHhhhhHHHHhhh-cceeecCCcchhhHHHH
Confidence 5689999999999964334566777766666 58999999999965543
No 127
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=96.18 E-value=0.022 Score=43.33 Aligned_cols=74 Identities=16% Similarity=0.337 Sum_probs=47.1
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH----HHHcCCCCCeEEEEeCccccHHHHHHHh-c-
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKL----LDVLEVKYPFFLVVQGFLVGSYGLTWAL-K- 75 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~----l~~l~~~~~~~lv~~g~~gG~~~~~~a~-~- 75 (241)
+.|+++|+-|+.+|-+=|=.+.+. .++.++|+..+ .++.+.++ ++|| |+|-|+=.+.++. +
T Consensus 23 ~~l~~~G~~VvGvdsl~Yfw~~rt----------P~~~a~Dl~~~i~~y~~~w~~~~-vvLi--GYSFGADvlP~~~nrL 89 (192)
T PF06057_consen 23 EALAKQGVPVVGVDSLRYFWSERT----------PEQTAADLARIIRHYRARWGRKR-VVLI--GYSFGADVLPFIYNRL 89 (192)
T ss_pred HHHHHCCCeEEEechHHHHhhhCC----------HHHHHHHHHHHHHHHHHHhCCce-EEEE--eecCCchhHHHHHhhC
Confidence 357889999999998888776553 34445555544 45666654 6666 7876652222222 2
Q ss_pred ---CcCccCeEEEecC
Q 026228 76 ---NPSRISKLAILNS 88 (241)
Q Consensus 76 ---~p~~v~~lvl~~~ 88 (241)
.-++|+.++|++.
T Consensus 90 p~~~r~~v~~v~Ll~p 105 (192)
T PF06057_consen 90 PAALRARVAQVVLLSP 105 (192)
T ss_pred CHHHHhheeEEEEecc
Confidence 2357888888864
No 128
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=96.17 E-value=0.029 Score=44.27 Aligned_cols=79 Identities=18% Similarity=0.211 Sum_probs=44.2
Q ss_pred CceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCCCeEEEEeCccccHHHHHHHhcC----cCc
Q 026228 8 GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----EVKYPFFLVVQGFLVGSYGLTWALKN----PSR 79 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~~~lv~~g~~gG~~~~~~a~~~----p~~ 79 (241)
++++++.|.......-.... . .-..+...+.+..+++.. .-.+.+++| |||+|++....++.. ++.
T Consensus 39 ~~d~ft~df~~~~s~~~g~~-l---~~q~~~~~~~i~~i~~~~~~~~~~~~~vilV--gHSmGGlvar~~l~~~~~~~~~ 112 (225)
T PF07819_consen 39 HFDFFTVDFNEELSAFHGRT-L---QRQAEFLAEAIKYILELYKSNRPPPRSVILV--GHSMGGLVARSALSLPNYDPDS 112 (225)
T ss_pred ceeEEEeccCcccccccccc-H---HHHHHHHHHHHHHHHHhhhhccCCCCceEEE--EEchhhHHHHHHHhcccccccc
Confidence 57888988776532211110 0 001133445555555555 223456776 556666655554433 357
Q ss_pred cCeEEEecCCCCC
Q 026228 80 ISKLAILNSPLTA 92 (241)
Q Consensus 80 v~~lvl~~~~~~~ 92 (241)
|+.++.+++|...
T Consensus 113 v~~iitl~tPh~g 125 (225)
T PF07819_consen 113 VKTIITLGTPHRG 125 (225)
T ss_pred EEEEEEEcCCCCC
Confidence 9999999998753
No 129
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.13 E-value=0.16 Score=44.52 Aligned_cols=54 Identities=17% Similarity=0.207 Sum_probs=39.5
Q ss_pred CHHHHHHHHHHHHHHcC-----CCCCeEEEEeCcc-ccHHHHHHHhcCcCccCeEEEecCCCC
Q 026228 35 TENEFHEELDKLLDVLE-----VKYPFFLVVQGFL-VGSYGLTWALKNPSRISKLAILNSPLT 91 (241)
Q Consensus 35 ~~~~~a~~l~~~l~~l~-----~~~~~~lv~~g~~-gG~~~~~~a~~~p~~v~~lvl~~~~~~ 91 (241)
|+++.+.....|++++. ..+ .+|| |.. ||..++.+|+.+|+.+..+|+..+|..
T Consensus 117 Tl~DV~~ae~~Fv~~V~~~hp~~~k-p~li--GnCQgGWa~~mlAA~~Pd~~gplvlaGaPls 176 (581)
T PF11339_consen 117 TLEDVMRAEAAFVEEVAERHPDAPK-PNLI--GNCQGGWAAMMLAALRPDLVGPLVLAGAPLS 176 (581)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCC-ceEE--eccHHHHHHHHHHhcCcCccCceeecCCCcc
Confidence 67888888888887654 224 3555 443 555677889999999999999888753
No 130
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=96.09 E-value=0.017 Score=46.73 Aligned_cols=61 Identities=30% Similarity=0.471 Sum_probs=48.0
Q ss_pred CCeEEEecCCCCCCChhHHHHHHhcCCC-ceeEEEeCCCCCCCCCCChH---HHHHHHHHHHhhc
Q 026228 180 KPVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPE---KVVDGLRYFFLNY 240 (241)
Q Consensus 180 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~agH~~~~e~p~---~~~~~l~~fl~~~ 240 (241)
.|+|+++|..|..+|......+...... ..+...+++++|......+. +-...+.+|+.++
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~ 297 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEFLERH 297 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHHHHHh
Confidence 7999999999999998877776655555 45778889999998864444 6778888888764
No 131
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=96.06 E-value=0.0037 Score=48.81 Aligned_cols=51 Identities=16% Similarity=0.151 Sum_probs=32.6
Q ss_pred CCCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChH
Q 026228 176 GSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPE 227 (241)
Q Consensus 176 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~ 227 (241)
.++++|+|.|+|++|.+++++.++.+.+.+.+..+++.. +.||.++...++
T Consensus 158 ~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h-~gGH~vP~~~~~ 208 (212)
T PF03959_consen 158 PKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEH-DGGHHVPRKKED 208 (212)
T ss_dssp TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEE-SSSSS----HHH
T ss_pred ccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEE-CCCCcCcCChhh
Confidence 468999999999999999988888888877763355555 579999876544
No 132
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.04 E-value=0.016 Score=44.91 Aligned_cols=64 Identities=17% Similarity=0.300 Sum_probs=46.8
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCC----ceeEEEeCCCCCCCC-----CCCh------HHHHHHHHHHHhhc
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPN----VVKLQMIEGAGHMPQ-----EDWP------EKVVDGLRYFFLNY 240 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~----~~~~~~i~~agH~~~-----~e~p------~~~~~~l~~fl~~~ 240 (241)
.+.+|+|++.|+.|..+|+.....+.+.+.. ..++++++|-+|--. .+.| |+..+.+.+||..|
T Consensus 162 ~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~Wf~~y 240 (242)
T KOG3043|consen 162 NVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFISWFKHY 240 (242)
T ss_pred cCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 4679999999999999988766555443332 126999999999754 3444 56677788888776
No 133
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=95.97 E-value=0.0092 Score=51.35 Aligned_cols=61 Identities=25% Similarity=0.279 Sum_probs=44.7
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcCC-------------------------CceeEEEeCCCCCCCCCCChHHHHHHH
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGNP-------------------------NVVKLQMIEGAGHMPQEDWPEKVVDGL 233 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~-------------------------~~~~~~~i~~agH~~~~e~p~~~~~~l 233 (241)
++++|+..|..|.+++.-..+.+.+.+. ++.+.+.|.+|||+++.++|++..+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 4899999999999998766655554322 123578899999999999999999999
Q ss_pred HHHHhh
Q 026228 234 RYFFLN 239 (241)
Q Consensus 234 ~~fl~~ 239 (241)
+.||+.
T Consensus 410 ~~fl~g 415 (415)
T PF00450_consen 410 RRFLKG 415 (415)
T ss_dssp HHHHCT
T ss_pred HHHhcC
Confidence 999863
No 134
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=95.88 E-value=0.67 Score=38.30 Aligned_cols=45 Identities=20% Similarity=0.130 Sum_probs=32.4
Q ss_pred CCeEEEecCCCCCCCh--hHHHHHHhcCCCceeEEEeCCCCCCCCCCC
Q 026228 180 KPVLVAWGISDKYLPQ--SVAEEFQKGNPNVVKLQMIEGAGHMPQEDW 225 (241)
Q Consensus 180 ~P~l~i~G~~D~~~~~--~~~~~~~~~~~~~~~~~~i~~agH~~~~e~ 225 (241)
-|++++.|+.|...+. ...+.+.+..-. ++++.+++..|....-.
T Consensus 246 PP~~i~~a~~D~l~~~~~~~a~~L~~agv~-~~~~~~~g~~H~f~~~~ 292 (312)
T COG0657 246 PPTLIQTAEFDPLRDEGEAYAERLRAAGVP-VELRVYPGMIHGFDLLT 292 (312)
T ss_pred CCEEEEecCCCcchhHHHHHHHHHHHcCCe-EEEEEeCCcceeccccC
Confidence 4899999999998873 233555554444 68999999999654333
No 135
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=95.84 E-value=0.035 Score=48.28 Aligned_cols=82 Identities=17% Similarity=0.202 Sum_probs=51.4
Q ss_pred CceEEeeCCCCCCCCCCCCCCC---CCCCCCHHHHHHHHHHHHHHcC--C----CCCeEEEEeCccccHHHHHHHhcCcC
Q 026228 8 GFHCFAPDWLGFGFSDKPEKGY---DDFDFTENEFHEELDKLLDVLE--V----KYPFFLVVQGFLVGSYGLTWALKNPS 78 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~p~~~~---~~~~~~~~~~a~~l~~~l~~l~--~----~~~~~lv~~g~~gG~~~~~~a~~~p~ 78 (241)
|--||+...|=||+|. |-... ...-+|.++..+|++.|++.+. . +.+++++| |+.+|+++..+-.+||+
T Consensus 59 ~a~~v~lEHRyYG~S~-P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~G-gSY~G~Laaw~r~kyP~ 136 (434)
T PF05577_consen 59 GALVVALEHRYYGKSQ-PFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFG-GSYGGALAAWFRLKYPH 136 (434)
T ss_dssp TEEEEEE--TTSTTB--TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEE-ETHHHHHHHHHHHH-TT
T ss_pred CCcEEEeehhhhcCCC-CccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEC-CcchhHHHHHHHhhCCC
Confidence 4569999999999995 32111 0112577888888888887665 1 23667665 44588888888899999
Q ss_pred ccCeEEEecCCCC
Q 026228 79 RISKLAILNSPLT 91 (241)
Q Consensus 79 ~v~~lvl~~~~~~ 91 (241)
.|.+.+.-++|..
T Consensus 137 ~~~ga~ASSapv~ 149 (434)
T PF05577_consen 137 LFDGAWASSAPVQ 149 (434)
T ss_dssp T-SEEEEET--CC
T ss_pred eeEEEEeccceee
Confidence 9999877777754
No 136
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=95.42 E-value=0.047 Score=43.75 Aligned_cols=77 Identities=25% Similarity=0.332 Sum_probs=46.5
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCe---------EEEEeCcc-ccHHHHH
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPF---------FLVVQGFL-VGSYGLT 71 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~---------~lv~~g~~-gG~~~~~ 71 (241)
+.++..||-||++|+...+..+.. ..-..++.+.+|+.+ ++++.. .+...||| ||-+++.
T Consensus 38 ~hvAShGyIVV~~d~~~~~~~~~~---------~~~~~~~~vi~Wl~~-~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~ 107 (259)
T PF12740_consen 38 EHVASHGYIVVAPDLYSIGGPDDT---------DEVASAAEVIDWLAK-GLESKLPLGVKPDFSKLALAGHSRGGKVAFA 107 (259)
T ss_pred HHHHhCceEEEEecccccCCCCcc---------hhHHHHHHHHHHHHh-cchhhccccccccccceEEeeeCCCCHHHHH
Confidence 457889999999997764432110 112345555666544 322110 11224675 5667777
Q ss_pred HHhcC-----cCccCeEEEecC
Q 026228 72 WALKN-----PSRISKLAILNS 88 (241)
Q Consensus 72 ~a~~~-----p~~v~~lvl~~~ 88 (241)
+++.+ +.++++++++++
T Consensus 108 ~al~~~~~~~~~~~~ali~lDP 129 (259)
T PF12740_consen 108 MALGNASSSLDLRFSALILLDP 129 (259)
T ss_pred HHhhhcccccccceeEEEEecc
Confidence 77776 668999999985
No 137
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.26 E-value=0.067 Score=44.56 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=45.2
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcCC------------------------CceeEEEeCCCCCCCCCCChHHHHHHHH
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGNP------------------------NVVKLQMIEGAGHMPQEDWPEKVVDGLR 234 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~i~~agH~~~~e~p~~~~~~l~ 234 (241)
.+++|+-.|+.|.+++.-..+.+.+.+. +..+++.+.+|||+++ .+|+...+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 4799999999998887644444433222 1146677779999997 59999999999
Q ss_pred HHHhh
Q 026228 235 YFFLN 239 (241)
Q Consensus 235 ~fl~~ 239 (241)
.|+..
T Consensus 312 ~fi~~ 316 (319)
T PLN02213 312 RWISG 316 (319)
T ss_pred HHHcC
Confidence 99964
No 138
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=95.21 E-value=0.043 Score=43.62 Aligned_cols=61 Identities=18% Similarity=0.263 Sum_probs=49.1
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhc---CCCceeEEEeCCCCCCCCC-CChHHHHHHHHHHH
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQE-DWPEKVVDGLRYFF 237 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~---~~~~~~~~~i~~agH~~~~-e~p~~~~~~l~~fl 237 (241)
..++|-|+|+++.|.+++.+..++.++. ..-.++.+.+++++|.-|. ++|++=.+++.+|+
T Consensus 176 ~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 176 PSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 5579999999999999998766554432 2223688899999999995 99999999999885
No 139
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=94.82 E-value=0.068 Score=47.41 Aligned_cols=81 Identities=17% Similarity=0.058 Sum_probs=53.7
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHcCCC-CCeEEEEeCccc-cHHHHHHHhcCcCc
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFT-ENEFHEELDKLLDVLEVK-YPFFLVVQGFLV-GSYGLTWALKNPSR 79 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~-~~~~a~~l~~~l~~l~~~-~~~~lv~~g~~g-G~~~~~~a~~~p~~ 79 (241)
.++.+||-||..|.||.|.|......+ ++ ..+=.-|+.+|+.++.-. ..+-++ |.|- |.-.+.+|+..|..
T Consensus 75 ~~aa~GYavV~qDvRG~~~SeG~~~~~----~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~--G~SY~g~tq~~~Aa~~pPa 148 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGGSEGVFDPE----SSREAEDGYDTIEWLAKQPWSNGNVGML--GLSYLGFTQLAAAALQPPA 148 (563)
T ss_pred eeecCceEEEEecccccccCCccccee----ccccccchhHHHHHHHhCCccCCeeeee--cccHHHHHHHHHHhcCCch
Confidence 467789999999999999998765432 12 222245788888887642 233333 5443 33456777888888
Q ss_pred cCeEEEecCC
Q 026228 80 ISKLAILNSP 89 (241)
Q Consensus 80 v~~lvl~~~~ 89 (241)
++.++-..+.
T Consensus 149 Lkai~p~~~~ 158 (563)
T COG2936 149 LKAIAPTEGL 158 (563)
T ss_pred heeecccccc
Confidence 9987665543
No 140
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=94.81 E-value=0.19 Score=40.85 Aligned_cols=86 Identities=20% Similarity=0.180 Sum_probs=54.5
Q ss_pred CCcCC-CceEEeeCC-------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccc-cHHHHHHH
Q 026228 3 QMSDA-GFHCFAPDW-------LGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLV-GSYGLTWA 73 (241)
Q Consensus 3 ~L~~~-~~~via~Dl-------~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~g-G~~~~~~a 73 (241)
.|+++ ||-|+.||- .|+|.+..|.....+ .-+...+.+.+..++.+.+++... +.+.|+|. |.++..++
T Consensus 85 ~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g-~ddVgflr~lva~l~~~~gidp~R-VyvtGlS~GG~Ma~~la 162 (312)
T COG3509 85 ALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRG-VDDVGFLRALVAKLVNEYGIDPAR-VYVTGLSNGGRMANRLA 162 (312)
T ss_pred hhhcccCcEEECcCccccccCCCcccccCCcccccCC-ccHHHHHHHHHHHHHHhcCcCcce-EEEEeeCcHHHHHHHHH
Confidence 34444 888999852 233333222211101 113456777888888888998543 33358865 45788999
Q ss_pred hcCcCccCeEEEecCCC
Q 026228 74 LKNPSRISKLAILNSPL 90 (241)
Q Consensus 74 ~~~p~~v~~lvl~~~~~ 90 (241)
+.+|+.+.++.++.+..
T Consensus 163 c~~p~~faa~A~VAg~~ 179 (312)
T COG3509 163 CEYPDIFAAIAPVAGLL 179 (312)
T ss_pred hcCcccccceeeeeccc
Confidence 99999999998887643
No 141
>PLN02209 serine carboxypeptidase
Probab=94.21 E-value=0.19 Score=43.80 Aligned_cols=60 Identities=17% Similarity=0.248 Sum_probs=46.5
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcCC-----------------------C-ceeEEEeCCCCCCCCCCChHHHHHHHH
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGNP-----------------------N-VVKLQMIEGAGHMPQEDWPEKVVDGLR 234 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~-----------------------~-~~~~~~i~~agH~~~~e~p~~~~~~l~ 234 (241)
.+++|+..|+.|-+++....+.+.+.+. + ..+.+.+.+|||+++ .+|++..+.+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 4799999999999888755555443322 1 246677889999997 69999999999
Q ss_pred HHHhh
Q 026228 235 YFFLN 239 (241)
Q Consensus 235 ~fl~~ 239 (241)
.|+..
T Consensus 430 ~fi~~ 434 (437)
T PLN02209 430 RWISG 434 (437)
T ss_pred HHHcC
Confidence 99964
No 142
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.04 E-value=0.22 Score=43.30 Aligned_cols=60 Identities=15% Similarity=0.205 Sum_probs=46.0
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcCC------------------------CceeEEEeCCCCCCCCCCChHHHHHHHH
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGNP------------------------NVVKLQMIEGAGHMPQEDWPEKVVDGLR 234 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~i~~agH~~~~e~p~~~~~~l~ 234 (241)
.+++|+..|+.|.+++....+.+.+.+. +..+.+.+.+|||+++ .+|++....+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 4799999999999888755544433221 1246677889999997 69999999999
Q ss_pred HHHhh
Q 026228 235 YFFLN 239 (241)
Q Consensus 235 ~fl~~ 239 (241)
.|+..
T Consensus 426 ~Fi~~ 430 (433)
T PLN03016 426 RWISG 430 (433)
T ss_pred HHHcC
Confidence 99964
No 143
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=93.93 E-value=0.34 Score=42.60 Aligned_cols=74 Identities=26% Similarity=0.364 Sum_probs=45.5
Q ss_pred ceEEeeCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-------CCCCCeEEEEeCc-cccHHHHHHHhc---C
Q 026228 9 FHCFAPDWL-GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL-------EVKYPFFLVVQGF-LVGSYGLTWALK---N 76 (241)
Q Consensus 9 ~~via~Dl~-G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~~lv~~g~-~gG~~~~~~a~~---~ 76 (241)
..++.+|+| |+|.|-..... ...+.++.++|+.++++.. +. .+++|+ |+ +||.++-.+|.. +
T Consensus 122 ~~~l~iDqP~G~G~S~~~~~~---~~~~~~~~a~d~~~~l~~f~~~~p~~~~-~~~~i~--GeSygG~y~p~~a~~i~~~ 195 (462)
T PTZ00472 122 AYVIYVDQPAGVGFSYADKAD---YDHNESEVSEDMYNFLQAFFGSHEDLRA-NDLFVV--GESYGGHYAPATAYRINMG 195 (462)
T ss_pred cCeEEEeCCCCcCcccCCCCC---CCCChHHHHHHHHHHHHHHHHhCccccC-CCEEEE--eecchhhhHHHHHHHHHhh
Confidence 679999986 88877543221 2235577888888888843 22 356665 44 467665444432 1
Q ss_pred -------cCccCeEEEecC
Q 026228 77 -------PSRISKLAILNS 88 (241)
Q Consensus 77 -------p~~v~~lvl~~~ 88 (241)
+=.++++++-|+
T Consensus 196 n~~~~~~~inLkGi~IGNg 214 (462)
T PTZ00472 196 NKKGDGLYINLAGLAVGNG 214 (462)
T ss_pred ccccCCceeeeEEEEEecc
Confidence 124778877764
No 144
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=93.39 E-value=0.23 Score=43.19 Aligned_cols=60 Identities=27% Similarity=0.334 Sum_probs=45.3
Q ss_pred CCeEEEecCCCCCCChhHHHHHHhcC---------C---------C------ceeEEEeCCCCCCCCCCChHHHHHHHHH
Q 026228 180 KPVLVAWGISDKYLPQSVAEEFQKGN---------P---------N------VVKLQMIEGAGHMPQEDWPEKVVDGLRY 235 (241)
Q Consensus 180 ~P~l~i~G~~D~~~~~~~~~~~~~~~---------~---------~------~~~~~~i~~agH~~~~e~p~~~~~~l~~ 235 (241)
.++|+..|+.|.++|.-..+.+.+.+ | + +.....+.||||+++.++|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 79999999999998865444432110 0 0 0234677899999999999999999999
Q ss_pred HHhh
Q 026228 236 FFLN 239 (241)
Q Consensus 236 fl~~ 239 (241)
|+..
T Consensus 444 fl~g 447 (454)
T KOG1282|consen 444 FLNG 447 (454)
T ss_pred HHcC
Confidence 9965
No 145
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=92.70 E-value=0.29 Score=38.45 Aligned_cols=51 Identities=14% Similarity=0.128 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCcCccCeEEEecC
Q 026228 37 NEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSRISKLAILNS 88 (241)
Q Consensus 37 ~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~~v~~lvl~~~ 88 (241)
..+++.|..+.++.+++..-+.+ .|+ +||+++..+++.+||.+.++.+.+.
T Consensus 79 ~~i~~lv~~v~~~~~iD~~RVyv-~G~S~Gg~ma~~la~~~pd~faa~a~~sG 130 (220)
T PF10503_consen 79 AFIAALVDYVAARYNIDPSRVYV-TGLSNGGMMANVLACAYPDLFAAVAVVSG 130 (220)
T ss_pred hhHHHHHHhHhhhcccCCCceee-EEECHHHHHHHHHHHhCCccceEEEeecc
Confidence 34556666677777776432222 366 4677899999999999999877665
No 146
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.53 E-value=0.42 Score=42.67 Aligned_cols=64 Identities=22% Similarity=0.275 Sum_probs=46.9
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCC---------hHHHHHHHHHHHhhc
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDW---------PEKVVDGLRYFFLNY 240 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~---------p~~~~~~l~~fl~~~ 240 (241)
++..|+||+.|..|...++...+++++.+-...++++|.+++|..-.-. =.+|+..+..+|.+|
T Consensus 302 dmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaipk~k~esegltqseVd~~i~~aI~ef 374 (784)
T KOG3253|consen 302 DMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIPKRKVESEGLTQSEVDSAIAQAIKEF 374 (784)
T ss_pred hcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCCccccccccccHHHHHHHHHHHHHHH
Confidence 4578999999999999988877777765544468999999999976543 134555555555443
No 147
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=92.46 E-value=0.29 Score=37.36 Aligned_cols=62 Identities=18% Similarity=0.273 Sum_probs=44.9
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcC---CC-ceeEEEeCCCCCCCCCC---ChHHHHHHHHHHHhhc
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGN---PN-VVKLQMIEGAGHMPQED---WPEKVVDGLRYFFLNY 240 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~---~~-~~~~~~i~~agH~~~~e---~p~~~~~~l~~fl~~~ 240 (241)
+++.|-|-|+.|.+..+.+......++ |. ....++.+||||+=--. --+++...|++|+..|
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 468888999999999887665555554 43 12456779999995533 2378888999998765
No 148
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=91.58 E-value=0.87 Score=37.99 Aligned_cols=59 Identities=20% Similarity=0.300 Sum_probs=37.0
Q ss_pred CCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc-----CCCCCeEEEEeCcc-ccHHHHHHHhc
Q 026228 7 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL-----EVKYPFFLVVQGFL-VGSYGLTWALK 75 (241)
Q Consensus 7 ~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l-----~~~~~~~lv~~g~~-gG~~~~~~a~~ 75 (241)
.+-.|+.+..||.|.|..+. +.++++.+-.+.++.| |+. +-.+++.||| ||+++.. |+.
T Consensus 170 ~~aNvl~fNYpGVg~S~G~~--------s~~dLv~~~~a~v~yL~d~~~G~k-a~~Ii~yG~SLGG~Vqa~-AL~ 234 (365)
T PF05677_consen 170 LGANVLVFNYPGVGSSTGPP--------SRKDLVKDYQACVRYLRDEEQGPK-AKNIILYGHSLGGGVQAE-ALK 234 (365)
T ss_pred cCCcEEEECCCccccCCCCC--------CHHHHHHHHHHHHHHHHhcccCCC-hheEEEeeccccHHHHHH-HHH
Confidence 35689999999999998755 2355555555554444 333 2345567885 6666544 443
No 149
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=91.09 E-value=8.4 Score=36.23 Aligned_cols=181 Identities=17% Similarity=0.186 Sum_probs=96.7
Q ss_pred CcCCCceEEeeCCCCCCCCCCCC--CCC-CCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHH-HHHHHhcCcCc
Q 026228 4 MSDAGFHCFAPDWLGFGFSDKPE--KGY-DDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALKNPSR 79 (241)
Q Consensus 4 L~~~~~~via~Dl~G~G~S~~p~--~~~-~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~-~~~~a~~~p~~ 79 (241)
.+..|+-|+.+|-||-|.....- ..+ ..-....++....+..+++..-++...+.| -||+-|++ .+......|+.
T Consensus 554 ~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD~~ri~i-~GwSyGGy~t~~~l~~~~~~ 632 (755)
T KOG2100|consen 554 VSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFIDRSRVAI-WGWSYGGYLTLKLLESDPGD 632 (755)
T ss_pred hccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhcccccHHHeEE-eccChHHHHHHHHhhhCcCc
Confidence 45678999999999987654220 000 001235677777778887776555433333 37765554 55556677766
Q ss_pred cCeE-EEecCCCCCCCCcchHHhhhccchhhhhhhhhHHHHHHHHhhCCCCccChhhHhhhhccccCCCCChhHHHHHHH
Q 026228 80 ISKL-AILNSPLTASSPLPGLFQQLRIPLLGEFTAQNAIMAERFIEAGSPYVLKLDKADVYRLPYLASSGPGFALLEAAR 158 (241)
Q Consensus 80 v~~l-vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (241)
+-+. +.++ |++-. .. .. ....+++. +.+.. ....|.
T Consensus 633 ~fkcgvava-PVtd~----------~~--yd------s~~terym--g~p~~----~~~~y~------------------ 669 (755)
T KOG2100|consen 633 VFKCGVAVA-PVTDW----------LY--YD------STYTERYM--GLPSE----NDKGYE------------------ 669 (755)
T ss_pred eEEEEEEec-ceeee----------ee--ec------ccccHhhc--CCCcc----ccchhh------------------
Confidence 6655 4444 33210 00 00 00011221 11100 000010
Q ss_pred hcChhhhHHhhhcCCCCCCCCCC-eEEEecCCCCCCChhHHHHHH----hcCCCceeEEEeCCCCCCCCCCC-hHHHHHH
Q 026228 159 KVNFKDISSRIGAGFSSGSWDKP-VLVAWGISDKYLPQSVAEEFQ----KGNPNVVKLQMIEGAGHMPQEDW-PEKVVDG 232 (241)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~P-~l~i~G~~D~~~~~~~~~~~~----~~~~~~~~~~~i~~agH~~~~e~-p~~~~~~ 232 (241)
......... .++.| .|++||+.|..++.+.+..+. ..--. .+..++|+..|..-.-. -..+...
T Consensus 670 e~~~~~~~~---------~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~-~~~~vypde~H~is~~~~~~~~~~~ 739 (755)
T KOG2100|consen 670 ESSVSSPAN---------NIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVP-FRLLVYPDENHGISYVEVISHLYEK 739 (755)
T ss_pred hccccchhh---------hhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCc-eEEEEeCCCCcccccccchHHHHHH
Confidence 001111111 23445 499999999999776554444 22222 58999999999987633 3566777
Q ss_pred HHHHHh
Q 026228 233 LRYFFL 238 (241)
Q Consensus 233 l~~fl~ 238 (241)
+..||.
T Consensus 740 ~~~~~~ 745 (755)
T KOG2100|consen 740 LDRFLR 745 (755)
T ss_pred HHHHHH
Confidence 777775
No 150
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=90.26 E-value=0.78 Score=39.70 Aligned_cols=51 Identities=18% Similarity=0.093 Sum_probs=33.3
Q ss_pred HHHHHHHHHHHHHc-CC--CCCeEEEEeCcc-ccHHHHHHHhcCcCccCeEEEecC
Q 026228 37 NEFHEELDKLLDVL-EV--KYPFFLVVQGFL-VGSYGLTWALKNPSRISKLAILNS 88 (241)
Q Consensus 37 ~~~a~~l~~~l~~l-~~--~~~~~lv~~g~~-gG~~~~~~a~~~p~~v~~lvl~~~ 88 (241)
+.++++|.-++++. .. ++...+|+ |+| ||..++.+++++|+++..++.+++
T Consensus 267 ~~l~~eLlP~I~~~y~~~~d~~~~~Ia-G~S~GGl~AL~~al~~Pd~Fg~v~s~Sg 321 (411)
T PRK10439 267 LAVQQELLPQVRAIAPFSDDADRTVVA-GQSFGGLAALYAGLHWPERFGCVLSQSG 321 (411)
T ss_pred HHHHHHHHHHHHHhCCCCCCccceEEE-EEChHHHHHHHHHHhCcccccEEEEecc
Confidence 34567777777764 22 21223333 554 555678889999999999988864
No 151
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=87.35 E-value=0.73 Score=39.35 Aligned_cols=80 Identities=21% Similarity=0.201 Sum_probs=49.5
Q ss_pred CceEEeeCCCCCCCCCCCCCC--C-----CCCCCC----HHHHHHHHHHHHHHcCCC-CCeEEEEeCccccHHHHHHHhc
Q 026228 8 GFHCFAPDWLGFGFSDKPEKG--Y-----DDFDFT----ENEFHEELDKLLDVLEVK-YPFFLVVQGFLVGSYGLTWALK 75 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~p~~~--~-----~~~~~~----~~~~a~~l~~~l~~l~~~-~~~~lv~~g~~gG~~~~~~a~~ 75 (241)
+--+|-+..|=||+|- |-.. + -++ ++ ++++|+.|..+-+.++-+ .+++.+ +|+.||+++..+-++
T Consensus 111 ~AllVFaEHRyYGeS~-PFG~~s~k~~~hlgy-LtseQALADfA~ll~~lK~~~~a~~~pvIaf-GGSYGGMLaAWfRlK 187 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESL-PFGSQSYKDARHLGY-LTSEQALADFAELLTFLKRDLSAEASPVIAF-GGSYGGMLAAWFRLK 187 (492)
T ss_pred CceEEEeehhccccCC-CCcchhccChhhhcc-ccHHHHHHHHHHHHHHHhhccccccCcEEEe-cCchhhHHHHHHHhc
Confidence 3457788888899983 3211 1 011 12 245555555555555433 355555 466799999889999
Q ss_pred CcCccCeEEEecCCC
Q 026228 76 NPSRISKLAILNSPL 90 (241)
Q Consensus 76 ~p~~v~~lvl~~~~~ 90 (241)
||-.|.+....++|.
T Consensus 188 YPHiv~GAlAaSAPv 202 (492)
T KOG2183|consen 188 YPHIVLGALAASAPV 202 (492)
T ss_pred ChhhhhhhhhccCce
Confidence 999999876666664
No 152
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=87.00 E-value=1 Score=35.76 Aligned_cols=51 Identities=18% Similarity=0.184 Sum_probs=33.1
Q ss_pred HHHHHHHHHHHHH-cCCCCCeEEEEeCcc-ccHHHHHHHhcCcCccCeEEEecC
Q 026228 37 NEFHEELDKLLDV-LEVKYPFFLVVQGFL-VGSYGLTWALKNPSRISKLAILNS 88 (241)
Q Consensus 37 ~~~a~~l~~~l~~-l~~~~~~~lv~~g~~-gG~~~~~~a~~~p~~v~~lvl~~~ 88 (241)
+.+.++|..++++ ..+...-..|+ |+| ||..++.+++++|+.+++++.+++
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~-G~S~GG~~Al~~~l~~Pd~F~~~~~~S~ 148 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIA-GHSMGGYGALYLALRHPDLFGAVIAFSG 148 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEE-EETHHHHHHHHHHHHSTTTESEEEEESE
T ss_pred eehhccchhHHHHhcccccceeEEe-ccCCCcHHHHHHHHhCccccccccccCc
Confidence 3456677777664 33322202332 664 555678899999999999998874
No 153
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=86.81 E-value=2.3 Score=35.73 Aligned_cols=55 Identities=15% Similarity=0.169 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCc--CccCeEEEecCCCC
Q 026228 35 TENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNP--SRISKLAILNSPLT 91 (241)
Q Consensus 35 ~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p--~~v~~lvl~~~~~~ 91 (241)
.-+.+.+.|.+.+...+-+ ++.||||. +||.....++-..+ .+|++++.+++|..
T Consensus 109 ~~~ql~~~V~~~l~~~ga~-~v~LigHS-~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 109 RGEQLFAYVDEVLAKTGAK-KVNLIGHS-MGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred cHHHHHHHHHHHHhhcCCC-ceEEEeec-ccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 3466777888888888775 47777432 46666666666666 89999999998754
No 154
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=86.12 E-value=0.95 Score=34.80 Aligned_cols=41 Identities=27% Similarity=0.368 Sum_probs=28.7
Q ss_pred CCeEEEecCCCCCCCh--hHHHHHHhcCCCceeEEEeCCCCCCC
Q 026228 180 KPVLVAWGISDKYLPQ--SVAEEFQKGNPNVVKLQMIEGAGHMP 221 (241)
Q Consensus 180 ~P~l~i~G~~D~~~~~--~~~~~~~~~~~~~~~~~~i~~agH~~ 221 (241)
.|+++++|+.|...+. ...+.+.+..- .+++++++|.+|..
T Consensus 167 Pp~~i~~g~~D~l~~~~~~~~~~L~~~gv-~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 167 PPTLIIHGEDDVLVDDSLRFAEKLKKAGV-DVELHVYPGMPHGF 209 (211)
T ss_dssp HEEEEEEETTSTTHHHHHHHHHHHHHTT--EEEEEEETTEETTG
T ss_pred CCeeeeccccccchHHHHHHHHHHHHCCC-CEEEEEECCCeEEe
Confidence 4999999999987632 22344444333 47999999999964
No 155
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=86.05 E-value=2.5 Score=37.04 Aligned_cols=82 Identities=16% Similarity=0.170 Sum_probs=56.2
Q ss_pred CceEEeeCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHcCCC----C--CeEEEEeCccccHHHHHHHhcCcC
Q 026228 8 GFHCFAPDWLGFGFSDKPEKGYD---DFDFTENEFHEELDKLLDVLEVK----Y--PFFLVVQGFLVGSYGLTWALKNPS 78 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~p~~~~~---~~~~~~~~~a~~l~~~l~~l~~~----~--~~~lv~~g~~gG~~~~~~a~~~p~ 78 (241)
|-.|+-...|=||+|. |...-+ -.-.|.++.-.||+.|+++++.+ . +.+.+| |+..|++++.+-..+|+
T Consensus 118 gA~v~~lEHRFYG~S~-P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFG-gSYsGsLsAW~R~~yPe 195 (514)
T KOG2182|consen 118 GATVFQLEHRFYGQSS-PIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFG-GSYSGSLSAWFREKYPE 195 (514)
T ss_pred CCeeEEeeeeccccCC-CCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEEC-CCchhHHHHHHHHhCch
Confidence 6678889999999984 322111 11234567778899999888753 2 556554 44467777677789999
Q ss_pred ccCeEEEecCCCC
Q 026228 79 RISKLAILNSPLT 91 (241)
Q Consensus 79 ~v~~lvl~~~~~~ 91 (241)
.+.+.|.-++|..
T Consensus 196 l~~GsvASSapv~ 208 (514)
T KOG2182|consen 196 LTVGSVASSAPVL 208 (514)
T ss_pred hheeeccccccee
Confidence 9999877766653
No 156
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=85.84 E-value=1.5 Score=34.79 Aligned_cols=72 Identities=17% Similarity=0.131 Sum_probs=38.0
Q ss_pred eEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCCCCeEEEEeCccccHHHHHHH-----hcCc---
Q 026228 10 HCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----EVKYPFFLVVQGFLVGSYGLTWA-----LKNP--- 77 (241)
Q Consensus 10 ~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l----~~~~~~~lv~~g~~gG~~~~~~a-----~~~p--- 77 (241)
.||.+.||..|.-. .|.....+...-+..+..+++.| +.+ .++++ +||+|...+.-| ...+
T Consensus 50 ~~i~FsWPS~g~~~----~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~-~I~il--aHSMG~rv~~~aL~~l~~~~~~~~ 122 (233)
T PF05990_consen 50 VVILFSWPSDGSLL----GYFYDRESARFSGPALARFLRDLARAPGIK-RIHIL--AHSMGNRVLLEALRQLASEGERPD 122 (233)
T ss_pred eEEEEEcCCCCChh----hhhhhhhhHHHHHHHHHHHHHHHHhccCCc-eEEEE--EeCchHHHHHHHHHHHHhcccchh
Confidence 79999999988621 11000012233444555555554 444 47777 445665432222 2222
Q ss_pred --CccCeEEEecC
Q 026228 78 --SRISKLAILNS 88 (241)
Q Consensus 78 --~~v~~lvl~~~ 88 (241)
.++..++++++
T Consensus 123 ~~~~~~~viL~Ap 135 (233)
T PF05990_consen 123 VKARFDNVILAAP 135 (233)
T ss_pred hHhhhheEEEECC
Confidence 36788888764
No 157
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=85.67 E-value=3.2 Score=34.46 Aligned_cols=42 Identities=14% Similarity=0.245 Sum_probs=27.7
Q ss_pred HHHHHcCCCCCeEEEEeCccccHHHHHHHhcCc-CccCeEEEecC
Q 026228 45 KLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNP-SRISKLAILNS 88 (241)
Q Consensus 45 ~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p-~~v~~lvl~~~ 88 (241)
+++.+.+.. .++|||+| +|+.++..+....+ ..+.+||++++
T Consensus 185 ~~~~~~~~~-~ivlIg~G-~gA~~~~~~la~~~~~~~daLV~I~a 227 (310)
T PF12048_consen 185 AFAQQQGGK-NIVLIGHG-TGAGWAARYLAEKPPPMPDALVLINA 227 (310)
T ss_pred HHHHhcCCc-eEEEEEeC-hhHHHHHHHHhcCCCcccCeEEEEeC
Confidence 444455543 36778777 46667777666544 46999999986
No 158
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=84.35 E-value=1.7 Score=33.96 Aligned_cols=34 Identities=24% Similarity=0.309 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHcCCC-CCeEEEEeCccccHHHHHHHh
Q 026228 39 FHEELDKLLDVLEVK-YPFFLVVQGFLVGSYGLTWAL 74 (241)
Q Consensus 39 ~a~~l~~~l~~l~~~-~~~~lv~~g~~gG~~~~~~a~ 74 (241)
+++.|.+.++..... .++.+| |||.|++..++|+
T Consensus 62 L~~eI~~~~~~~~~~~~~IsfI--gHSLGGli~r~al 96 (217)
T PF05057_consen 62 LAEEILEHIKDYESKIRKISFI--GHSLGGLIARYAL 96 (217)
T ss_pred HHHHHHHhccccccccccceEE--EecccHHHHHHHH
Confidence 444444444444433 346666 5655555455554
No 159
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=83.43 E-value=4.9 Score=34.54 Aligned_cols=52 Identities=15% Similarity=0.288 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHc---CCCCCeEEEEeCccccHHHHHHHhcCc------CccCeEEEecCCCC
Q 026228 38 EFHEELDKLLDVL---EVKYPFFLVVQGFLVGSYGLTWALKNP------SRISKLAILNSPLT 91 (241)
Q Consensus 38 ~~a~~l~~~l~~l---~~~~~~~lv~~g~~gG~~~~~~a~~~p------~~v~~lvl~~~~~~ 91 (241)
.+...|..+++.. . .++++||+| +|||.++..+....+ +.|+++|.+++|..
T Consensus 101 ~~~~~lk~~ie~~~~~~-~~kv~li~H-SmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKN-GKKVVLIAH-SMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HHHHHHHHHHHHHHHhc-CCcEEEEEe-CCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCC
Confidence 5556666666543 3 456777743 255656655544443 36999999998764
No 160
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=83.31 E-value=4.6 Score=30.59 Aligned_cols=54 Identities=22% Similarity=0.260 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHcCCCC----CeEEEEeCccccHHHHHHHhcC-cCccCeEEEecCCCCC
Q 026228 37 NEFHEELDKLLDVLEVKY----PFFLVVQGFLVGSYGLTWALKN-PSRISKLAILNSPLTA 92 (241)
Q Consensus 37 ~~~a~~l~~~l~~l~~~~----~~~lv~~g~~gG~~~~~~a~~~-p~~v~~lvl~~~~~~~ 92 (241)
+.-+..|..|++.|.-.. ...+| |||=|+...-.|+.. +..+..++++.+|...
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~~~~~tv~--GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGPDAHLTVV--GHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCEEEE--EecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 446677888887765321 33444 666677655666654 7899999999987643
No 161
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=82.31 E-value=29 Score=29.25 Aligned_cols=61 Identities=21% Similarity=0.131 Sum_probs=41.6
Q ss_pred CC-CeEEEecCCCCCCChh--HHHHHHhcCCCceeEEEeCCCCCCCCCC-----ChHHHHHHHHHHHhhc
Q 026228 179 DK-PVLVAWGISDKYLPQS--VAEEFQKGNPNVVKLQMIEGAGHMPQED-----WPEKVVDGLRYFFLNY 240 (241)
Q Consensus 179 ~~-P~l~i~G~~D~~~~~~--~~~~~~~~~~~~~~~~~i~~agH~~~~e-----~p~~~~~~l~~fl~~~ 240 (241)
.+ |+|++.++.|...... ..+++.+..-. +++..++++.|..+.= ...++.+.+.+|+...
T Consensus 267 ~lp~tlv~~ag~D~L~D~~~~Y~~~Lkk~Gv~-v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 267 GLPPTLVVVAGYDVLRDEGLAYAEKLKKAGVE-VTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred CCCceEEEEeCchhhhhhhHHHHHHHHHcCCe-EEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 44 5999999999876432 34555543333 4677899999987644 4457777788887654
No 162
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=80.04 E-value=0.92 Score=35.61 Aligned_cols=76 Identities=14% Similarity=0.118 Sum_probs=33.2
Q ss_pred CCCcCCCce---EEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcC
Q 026228 2 SQMSDAGFH---CFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPS 78 (241)
Q Consensus 2 ~~L~~~~~~---via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~ 78 (241)
+.|.++||. |++++.-....+......... --+.+++++.|..+++.-|- + +.+| |||.|+...++++++-.
T Consensus 23 ~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~-~~~~~~l~~fI~~Vl~~TGa-k-VDIV--gHS~G~~iaR~yi~~~~ 97 (219)
T PF01674_consen 23 PYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMS-CESAKQLRAFIDAVLAYTGA-K-VDIV--GHSMGGTIARYYIKGGG 97 (219)
T ss_dssp HHHHHTT--CCCEEEE--S-CCHHTHHHHHHB--HHHHHHHHHHHHHHHHHHT----EEEE--EETCHHHHHHHHHHHCT
T ss_pred HHHHHcCCCcceeEeccCCCCCCCCcccccccc-hhhHHHHHHHHHHHHHhhCC-E-EEEE--EcCCcCHHHHHHHHHcC
Confidence 356778898 799887444332211100000 00113444555555556665 4 7887 55666555566555333
Q ss_pred ccCe
Q 026228 79 RISK 82 (241)
Q Consensus 79 ~v~~ 82 (241)
-+..
T Consensus 98 ~~d~ 101 (219)
T PF01674_consen 98 GADK 101 (219)
T ss_dssp GGGT
T ss_pred CCCc
Confidence 3333
No 163
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=77.87 E-value=7.1 Score=32.79 Aligned_cols=77 Identities=16% Similarity=0.156 Sum_probs=38.4
Q ss_pred CCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----CCC-CCeEEEEeCcc-ccHHHHHHHhcCcC--
Q 026228 7 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----EVK-YPFFLVVQGFL-VGSYGLTWALKNPS-- 78 (241)
Q Consensus 7 ~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l----~~~-~~~~lv~~g~~-gG~~~~~~a~~~p~-- 78 (241)
.++.||++|+...-... |..........++.|..+++.| ++. +.++|| ||| |+.++...+.....
T Consensus 103 ~d~NVI~VDWs~~a~~~-----Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~~~ihlI--GhSLGAHvaG~aG~~~~~~~ 175 (331)
T PF00151_consen 103 GDYNVIVVDWSRGASNN-----YPQAVANTRLVGRQLAKFLSFLINNFGVPPENIHLI--GHSLGAHVAGFAGKYLKGGG 175 (331)
T ss_dssp S-EEEEEEE-HHHHSS------HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEEEE--EETCHHHHHHHHHHHTTT--
T ss_pred CCceEEEEcchhhcccc-----ccchhhhHHHHHHHHHHHHHHHHhhcCCChhHEEEE--eeccchhhhhhhhhhccCcc
Confidence 47999999997533221 1000001223444444444433 332 347888 454 55566665666565
Q ss_pred ccCeEEEecCCC
Q 026228 79 RISKLAILNSPL 90 (241)
Q Consensus 79 ~v~~lvl~~~~~ 90 (241)
+|.+++-++++.
T Consensus 176 ki~rItgLDPAg 187 (331)
T PF00151_consen 176 KIGRITGLDPAG 187 (331)
T ss_dssp -SSEEEEES-B-
T ss_pred eeeEEEecCccc
Confidence 899999999743
No 164
>COG0218 Predicted GTPase [General function prediction only]
Probab=77.71 E-value=2.2 Score=32.85 Aligned_cols=32 Identities=16% Similarity=0.469 Sum_probs=22.6
Q ss_pred EEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q 026228 11 CFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV 49 (241)
Q Consensus 11 via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~ 49 (241)
++.+||||||....|.. -.+.+.+.+.+.++.
T Consensus 72 ~~lVDlPGYGyAkv~k~-------~~e~w~~~i~~YL~~ 103 (200)
T COG0218 72 LRLVDLPGYGYAKVPKE-------VKEKWKKLIEEYLEK 103 (200)
T ss_pred EEEEeCCCcccccCCHH-------HHHHHHHHHHHHHhh
Confidence 67899999999876652 125566666666654
No 165
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=77.67 E-value=1.7 Score=33.32 Aligned_cols=72 Identities=19% Similarity=0.291 Sum_probs=39.2
Q ss_pred CCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---cCCC-CCeEEEEeCc-cccHHHHHHHhcCcC---
Q 026228 7 AGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV---LEVK-YPFFLVVQGF-LVGSYGLTWALKNPS--- 78 (241)
Q Consensus 7 ~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~---l~~~-~~~~lv~~g~-~gG~~~~~~a~~~p~--- 78 (241)
.|+.|+.+|-|=. |...+ +-.+++..+.+.-+++. ++++ +.++++ |+ .||.+++.++....+
T Consensus 28 ~g~~v~~~~Yrl~-----p~~~~---p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~--G~SAGg~la~~~~~~~~~~~~ 97 (211)
T PF07859_consen 28 RGFVVVSIDYRLA-----PEAPF---PAALEDVKAAYRWLLKNADKLGIDPERIVLI--GDSAGGHLALSLALRARDRGL 97 (211)
T ss_dssp HTSEEEEEE---T-----TTSST---THHHHHHHHHHHHHHHTHHHHTEEEEEEEEE--EETHHHHHHHHHHHHHHHTTT
T ss_pred ccEEEEEeecccc-----ccccc---cccccccccceeeeccccccccccccceEEe--ecccccchhhhhhhhhhhhcc
Confidence 6899999999832 22211 11245555555555555 3443 234444 55 466677777664332
Q ss_pred -ccCeEEEecC
Q 026228 79 -RISKLAILNS 88 (241)
Q Consensus 79 -~v~~lvl~~~ 88 (241)
.+++++++.+
T Consensus 98 ~~~~~~~~~~p 108 (211)
T PF07859_consen 98 PKPKGIILISP 108 (211)
T ss_dssp CHESEEEEESC
T ss_pred cchhhhhcccc
Confidence 4888888865
No 166
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=77.46 E-value=8.8 Score=33.12 Aligned_cols=65 Identities=18% Similarity=0.074 Sum_probs=48.5
Q ss_pred CCCCCCeEEEecCCCCCCChhHHHHHHhcCCCcee--EEEeCCCCCCCC---CCChHHHHHHHHHHHhhc
Q 026228 176 GSWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVK--LQMIEGAGHMPQ---EDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 176 ~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~--~~~i~~agH~~~---~e~p~~~~~~l~~fl~~~ 240 (241)
..+++|+.+.+|+.|-.+.++..+.+....++... .+-+++=.|+=. .+.++++.+-|.+.++.+
T Consensus 329 ~~i~~P~~l~~g~~D~l~~~~DV~~~~~~~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~ 398 (403)
T KOG2624|consen 329 TNIKVPTALYYGDNDWLADPEDVLILLLVLPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLF 398 (403)
T ss_pred cccccCEEEEecCCcccCCHHHHHHHHHhcccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhh
Confidence 46789999999999999888777766666666422 112677777733 688999999999988743
No 167
>PRK04940 hypothetical protein; Provisional
Probab=76.54 E-value=13 Score=28.17 Aligned_cols=53 Identities=13% Similarity=0.024 Sum_probs=35.2
Q ss_pred CeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHh
Q 026228 181 PVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 181 P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
-.+++-.+.|.+.....+. +...+..++++.+|..|- .++=++....|.+|+.
T Consensus 126 r~~vllq~gDEvLDyr~a~---~~y~~~y~~~v~~GGdH~--f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 126 RCLVILSRNDEVLDSQRTA---EELHPYYEIVWDEEQTHK--FKNISPHLQRIKAFKT 178 (180)
T ss_pred cEEEEEeCCCcccCHHHHH---HHhccCceEEEECCCCCC--CCCHHHHHHHHHHHHh
Confidence 3588999999998765443 333442267888888887 3344456677777764
No 168
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=76.10 E-value=6.8 Score=31.69 Aligned_cols=56 Identities=16% Similarity=0.232 Sum_probs=47.1
Q ss_pred eEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCC-CCChHHHHHHHHHHHhh
Q 026228 182 VLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQ-EDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 182 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~-~e~p~~~~~~l~~fl~~ 239 (241)
+.++.+++|..+|......+++.-|+ +++..++ .||... +-+-+.+...|.+-|.+
T Consensus 309 ~ivv~A~~D~Yipr~gv~~lQ~~WPg-~eVr~~e-gGHVsayl~k~dlfRR~I~d~L~R 365 (371)
T KOG1551|consen 309 IIVVQAKEDAYIPRTGVRSLQEIWPG-CEVRYLE-GGHVSAYLFKQDLFRRAIVDGLDR 365 (371)
T ss_pred EEEEEecCCccccccCcHHHHHhCCC-CEEEEee-cCceeeeehhchHHHHHHHHHHHh
Confidence 56778999999998888999999999 5999998 799854 67788899999888754
No 169
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=75.58 E-value=6.8 Score=28.50 Aligned_cols=51 Identities=18% Similarity=0.216 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHcC---CCCCeEEEEeCc-cccHHHHHHHhcCc----CccCeEEEecCCC
Q 026228 38 EFHEELDKLLDVLE---VKYPFFLVVQGF-LVGSYGLTWALKNP----SRISKLAILNSPL 90 (241)
Q Consensus 38 ~~a~~l~~~l~~l~---~~~~~~lv~~g~-~gG~~~~~~a~~~p----~~v~~lvl~~~~~ 90 (241)
.+.+.+...+++.. -+..++++ || +||+++..+++..+ ..+..++..++|.
T Consensus 9 ~~~~~i~~~~~~~~~~~p~~~i~v~--GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 9 SLANLVLPLLKSALAQYPDYKIHVT--GHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHHCCCCeEEEE--EcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 44555665555542 12334443 66 56777776666544 3566777777654
No 170
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=73.18 E-value=3.7 Score=34.75 Aligned_cols=61 Identities=15% Similarity=0.231 Sum_probs=48.6
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHhhc
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~~ 240 (241)
++..|-.++-|+.|..++++.+.-+-..+|+..-+..+|+..|.. .+..+.+.|..|+..|
T Consensus 327 RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~---~n~~i~esl~~flnrf 387 (507)
T COG4287 327 RLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNL---INQFIKESLEPFLNRF 387 (507)
T ss_pred hccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchh---hHHHHHHHHHHHHHHH
Confidence 678999999999999999998888888999966778889987764 4555666666666554
No 171
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=72.81 E-value=6.5 Score=30.40 Aligned_cols=56 Identities=23% Similarity=0.426 Sum_probs=39.8
Q ss_pred CCCeEEEecCCCCCCChhHHH----HHHhcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHhh
Q 026228 179 DKPVLVAWGISDKYLPQSVAE----EFQKGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~----~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
..|.+..||+.|+++|....+ .+...... ++.+.++|-+|.. .|+++ +.++.|+.+
T Consensus 144 ~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~-~~f~~y~g~~h~~---~~~e~-~~~~~~~~~ 203 (206)
T KOG2112|consen 144 YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVR-VTFKPYPGLGHST---SPQEL-DDLKSWIKT 203 (206)
T ss_pred cchhheecccCCceeehHHHHHHHHHHHHcCCc-eeeeecCCccccc---cHHHH-HHHHHHHHH
Confidence 579999999999999876543 33344444 6899999998875 45555 556666654
No 172
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=69.43 E-value=3.2 Score=35.02 Aligned_cols=54 Identities=22% Similarity=0.217 Sum_probs=39.4
Q ss_pred CCCCCCeEEEecCCCCCCChh-HHHHHHhcCCCc-eeEEEeCCCCCCCCCCChHHH
Q 026228 176 GSWDKPVLVAWGISDKYLPQS-VAEEFQKGNPNV-VKLQMIEGAGHMPQEDWPEKV 229 (241)
Q Consensus 176 ~~~~~P~l~i~G~~D~~~~~~-~~~~~~~~~~~~-~~~~~i~~agH~~~~e~p~~~ 229 (241)
.++++|++++-|..|...|.. ....-...+++. ..+.+++++.|+...|-++++
T Consensus 248 ~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~~ 303 (365)
T COG4188 248 VKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKEG 303 (365)
T ss_pred eeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCccc
Confidence 378999999999999866553 222233446652 257888999999999888774
No 173
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=68.71 E-value=17 Score=28.58 Aligned_cols=31 Identities=26% Similarity=0.206 Sum_probs=21.9
Q ss_pred eCc-cccHHHHHHHhc----CcCccCeEEEecCCCC
Q 026228 61 QGF-LVGSYGLTWALK----NPSRISKLAILNSPLT 91 (241)
Q Consensus 61 ~g~-~gG~~~~~~a~~----~p~~v~~lvl~~~~~~ 91 (241)
+|| .||.+|...|+. ..++|.++...|+|..
T Consensus 89 ~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 89 TGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred EEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 366 577787766655 3568899988888754
No 174
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=68.60 E-value=8.5 Score=31.16 Aligned_cols=75 Identities=20% Similarity=0.289 Sum_probs=44.0
Q ss_pred CCCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----c-------CCCCCeEEEEeCc-cccHHH
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV----L-------EVKYPFFLVVQGF-LVGSYG 69 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~----l-------~~~~~~~lv~~g~-~gG~~~ 69 (241)
..++.+||=||||++-.- . .|. +. +.-+.++.+.+|+.. + ++. +..++ || .||-.|
T Consensus 67 ~HIASHGfIVVAPQl~~~--~-~p~-~~-----~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~-klal~--GHSrGGktA 134 (307)
T PF07224_consen 67 AHIASHGFIVVAPQLYTL--F-PPD-GQ-----DEIKSAASVINWLPEGLQHVLPENVEANLS-KLALS--GHSRGGKTA 134 (307)
T ss_pred HHHhhcCeEEEechhhcc--c-CCC-ch-----HHHHHHHHHHHHHHhhhhhhCCCCcccccc-eEEEe--ecCCccHHH
Confidence 346788999999999852 1 122 21 222455566666543 1 123 34454 55 466677
Q ss_pred HHHHhcCc--CccCeEEEecC
Q 026228 70 LTWALKNP--SRISKLAILNS 88 (241)
Q Consensus 70 ~~~a~~~p--~~v~~lvl~~~ 88 (241)
..+|+.+. -.++.||-+++
T Consensus 135 FAlALg~a~~lkfsaLIGiDP 155 (307)
T PF07224_consen 135 FALALGYATSLKFSALIGIDP 155 (307)
T ss_pred HHHHhcccccCchhheecccc
Confidence 77777663 24777777775
No 175
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=67.93 E-value=17 Score=24.65 Aligned_cols=43 Identities=21% Similarity=0.305 Sum_probs=30.0
Q ss_pred HHHHHHHHHHcCCCCCeEEEEeCccccH---HHHHHHhcCcCccCeEEE
Q 026228 40 HEELDKLLDVLEVKYPFFLVVQGFLVGS---YGLTWALKNPSRISKLAI 85 (241)
Q Consensus 40 a~~l~~~l~~l~~~~~~~lv~~g~~gG~---~~~~~a~~~p~~v~~lvl 85 (241)
.+.|..+++...-. +++|| |.+|-. +-..+|..+|++|.++.+
T Consensus 52 ~~~i~~i~~~fP~~-kfiLI--GDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 52 RDNIERILRDFPER-KFILI--GDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHHCCCC-cEEEE--eeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 35677788887654 57887 555532 345688899999998744
No 176
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=67.64 E-value=11 Score=34.31 Aligned_cols=55 Identities=16% Similarity=0.138 Sum_probs=35.5
Q ss_pred CCHHHHHHHHHHHHHHcCCCCC-eEEEEeCccccHHHHHHHhcCcCccCeEEEecCCC
Q 026228 34 FTENEFHEELDKLLDVLEVKYP-FFLVVQGFLVGSYGLTWALKNPSRISKLAILNSPL 90 (241)
Q Consensus 34 ~~~~~~a~~l~~~l~~l~~~~~-~~lv~~g~~gG~~~~~~a~~~p~~v~~lvl~~~~~ 90 (241)
-|+.++.+....|+++ |..++ -+++.+|+-||++....+-..|+.++++|+ ..|+
T Consensus 506 NTf~DFIa~a~~Lv~~-g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA-~VPF 561 (682)
T COG1770 506 NTFTDFIAAARHLVKE-GYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIA-QVPF 561 (682)
T ss_pred ccHHHHHHHHHHHHHc-CcCCccceEEeccCchhHHHHHHHhhChhhhhheee-cCCc
Confidence 3678888888887765 44322 233334545666666677789999998744 4443
No 177
>COG0627 Predicted esterase [General function prediction only]
Probab=67.14 E-value=11 Score=31.51 Aligned_cols=29 Identities=31% Similarity=0.440 Sum_probs=22.3
Q ss_pred Cc-cccHHHHHHHhcCcCccCeEEEecCCC
Q 026228 62 GF-LVGSYGLTWALKNPSRISKLAILNSPL 90 (241)
Q Consensus 62 g~-~gG~~~~~~a~~~p~~v~~lvl~~~~~ 90 (241)
|+ |||.-++.+|+++|++++.+.-.++..
T Consensus 158 G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~ 187 (316)
T COG0627 158 GHSMGGYGALKLALKHPDRFKSASSFSGIL 187 (316)
T ss_pred EEeccchhhhhhhhhCcchhceeccccccc
Confidence 55 556668899999999999987776433
No 178
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=65.53 E-value=18 Score=29.11 Aligned_cols=58 Identities=12% Similarity=0.225 Sum_probs=47.5
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcCCC-ceeEEEeCCCCCCCCCCChHHHHHHHHHHH
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGNPN-VVKLQMIEGAGHMPQEDWPEKVVDGLRYFF 237 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~i~~agH~~~~e~p~~~~~~l~~fl 237 (241)
.+-+.+.+|..|.++|......+.+..|. .+++-+ +++-|.--..+.+.-+.++.+.+
T Consensus 242 ~d~l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Lde-dki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 242 LDSLWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDE-DKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred CcEEEEEccCCCCCcchHHHHHHhhhcchhceeecc-ccCCcceeecccHHHHHHHHHhh
Confidence 45788999999999999888999988886 345545 88999888888888888887765
No 179
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=62.79 E-value=10 Score=33.49 Aligned_cols=59 Identities=29% Similarity=0.286 Sum_probs=38.3
Q ss_pred CCeEEEecCCCCCCChhHH----HHHH--hcCCCceeEEEeCCCCCCCCCCChHHHHHHHHHHHhh
Q 026228 180 KPVLVAWGISDKYLPQSVA----EEFQ--KGNPNVVKLQMIEGAGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 180 ~P~l~i~G~~D~~~~~~~~----~~~~--~~~~~~~~~~~i~~agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
.+.+...|=.|..++.-+. +.+- ....+...+.++ .+|||++.++|+...+.+..|+..
T Consensus 426 Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s~~n~~~~r~y-~aGHMvp~d~P~~~~~~~~~~~~~ 490 (498)
T COG2939 426 LKWLGASGYFDASTPFFWSRLTLEEMGGYKSYRNLTFLRIY-EAGHMVPYDRPESSLEMVNLWING 490 (498)
T ss_pred ceEeeecchhhhcCCCcccccchhhcccccccCCceEEEEe-cCcceeecCChHHHHHHHHHHHhh
Confidence 4666666666766654333 1111 112233445555 499999999999999999998754
No 180
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=61.99 E-value=7.1 Score=30.13 Aligned_cols=27 Identities=19% Similarity=0.139 Sum_probs=20.8
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcC
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGN 205 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~ 205 (241)
..|+++++|++|.++|++.++.+.+.+
T Consensus 168 ~p~~~i~hG~~D~vVp~~~~~~~~~~l 194 (212)
T TIGR01840 168 TPIMSVVHGDADYTVLPGNADEIRDAM 194 (212)
T ss_pred CCeEEEEEcCCCceeCcchHHHHHHHH
Confidence 345789999999999988776666543
No 181
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=61.90 E-value=21 Score=30.29 Aligned_cols=24 Identities=29% Similarity=0.425 Sum_probs=18.4
Q ss_pred CCCcCCCceEEeeCCCC--CCCCCCC
Q 026228 2 SQMSDAGFHCFAPDWLG--FGFSDKP 25 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G--~G~S~~p 25 (241)
+.|+..||-|.++|-|| .|.....
T Consensus 92 ~~lAs~Gf~Va~~~hpgs~~~~~~~~ 117 (365)
T COG4188 92 EHLASYGFVVAAPDHPGSNAGGAPAA 117 (365)
T ss_pred HHHhhCceEEEeccCCCcccccCChh
Confidence 46788899999999999 3554433
No 182
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=61.90 E-value=16 Score=33.38 Aligned_cols=85 Identities=14% Similarity=0.103 Sum_probs=48.5
Q ss_pred CcCCCceEEeeCCCCCCCCC---CCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCcc-ccHHHHHHHhcCcCc
Q 026228 4 MSDAGFHCFAPDWLGFGFSD---KPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFL-VGSYGLTWALKNPSR 79 (241)
Q Consensus 4 L~~~~~~via~Dl~G~G~S~---~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~-gG~~~~~~a~~~p~~ 79 (241)
|.++|+-.--.|.||=|+=+ +.........-+++++....+-++++ |+-.+-.|-+.|.| ||.++....-.+||.
T Consensus 495 lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~-gyt~~~kL~i~G~SaGGlLvga~iN~rPdL 573 (712)
T KOG2237|consen 495 LLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVEN-GYTQPSKLAIEGGSAGGLLVGACINQRPDL 573 (712)
T ss_pred EEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHc-CCCCccceeEecccCccchhHHHhccCchH
Confidence 45567666667889866433 21111111223677777777777665 66544444444554 454555555689999
Q ss_pred cCeEEEecCCC
Q 026228 80 ISKLAILNSPL 90 (241)
Q Consensus 80 v~~lvl~~~~~ 90 (241)
++.++ +..|+
T Consensus 574 F~avi-a~Vpf 583 (712)
T KOG2237|consen 574 FGAVI-AKVPF 583 (712)
T ss_pred hhhhh-hcCcc
Confidence 98764 44443
No 183
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=60.35 E-value=17 Score=31.15 Aligned_cols=78 Identities=22% Similarity=0.291 Sum_probs=42.9
Q ss_pred CceEEeeCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc----C-C-CCCeEEEEeCccccHHHHHHH----hcC
Q 026228 8 GFHCFAPDWL-GFGFSDKPEKGYDDFDFTENEFHEELDKLLDVL----E-V-KYPFFLVVQGFLVGSYGLTWA----LKN 76 (241)
Q Consensus 8 ~~~via~Dl~-G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l----~-~-~~~~~lv~~g~~gG~~~~~~a----~~~ 76 (241)
...++-+|.| |-|.|-..... .+..+.++.++++..||+.. . . ..++.|.|= +.||..+-.+| ...
T Consensus 85 ~an~l~iD~PvGtGfS~~~~~~--~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GE-SYgG~yvP~~a~~i~~~~ 161 (415)
T PF00450_consen 85 FANLLFIDQPVGTGFSYGNDPS--DYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGE-SYGGHYVPALASYILQQN 161 (415)
T ss_dssp TSEEEEE--STTSTT-EESSGG--GGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEE-TTHHHHHHHHHHHHHHHT
T ss_pred ccceEEEeecCceEEeeccccc--cccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEcc-ccccccchhhHHhhhhcc
Confidence 3689999966 89998644321 12335677777777777654 1 2 235665532 24665543332 223
Q ss_pred ------cCccCeEEEecC
Q 026228 77 ------PSRISKLAILNS 88 (241)
Q Consensus 77 ------p~~v~~lvl~~~ 88 (241)
+=.++++++-|+
T Consensus 162 ~~~~~~~inLkGi~IGng 179 (415)
T PF00450_consen 162 KKGDQPKINLKGIAIGNG 179 (415)
T ss_dssp CC--STTSEEEEEEEESE
T ss_pred ccccccccccccceecCc
Confidence 446889887774
No 184
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=59.56 E-value=16 Score=32.21 Aligned_cols=76 Identities=8% Similarity=-0.012 Sum_probs=39.9
Q ss_pred ceEEeeCCC----CCCCCCCCCCCCCCCCCCHHH---HHHHHHHHHHHcCCCC-CeEEEEeCccccHH-HHHHHhc--Cc
Q 026228 9 FHCFAPDWL----GFGFSDKPEKGYDDFDFTENE---FHEELDKLLDVLEVKY-PFFLVVQGFLVGSY-GLTWALK--NP 77 (241)
Q Consensus 9 ~~via~Dl~----G~G~S~~p~~~~~~~~~~~~~---~a~~l~~~l~~l~~~~-~~~lv~~g~~gG~~-~~~~a~~--~p 77 (241)
+-|+.++-| ||+.+...... .++-+.+ ..+.|.+-++..|.+. .+.+ .|+|.|+. +..+++. .+
T Consensus 126 ~~vv~~~yRlg~~g~~~~~~~~~~---~n~g~~D~~~al~wv~~~i~~fggd~~~v~~--~G~SaG~~~~~~~~~~~~~~ 200 (493)
T cd00312 126 VIVVSINYRLGVLGFLSTGDIELP---GNYGLKDQRLALKWVQDNIAAFGGDPDSVTI--FGESAGGASVSLLLLSPDSK 200 (493)
T ss_pred EEEEEecccccccccccCCCCCCC---cchhHHHHHHHHHHHHHHHHHhCCCcceEEE--EeecHHHHHhhhHhhCcchh
Confidence 788888887 55544322111 1122233 3334455566677653 3443 36665554 3333332 35
Q ss_pred CccCeEEEecCC
Q 026228 78 SRISKLAILNSP 89 (241)
Q Consensus 78 ~~v~~lvl~~~~ 89 (241)
+.++++|+++..
T Consensus 201 ~lf~~~i~~sg~ 212 (493)
T cd00312 201 GLFHRAISQSGS 212 (493)
T ss_pred HHHHHHhhhcCC
Confidence 578898888754
No 185
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=59.41 E-value=21 Score=25.15 Aligned_cols=34 Identities=21% Similarity=0.374 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHh
Q 026228 38 EFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWAL 74 (241)
Q Consensus 38 ~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~ 74 (241)
.+.+.|..++++-. +..++ ..|| +||++|..+++
T Consensus 49 ~~~~~l~~~~~~~~-~~~i~--itGHSLGGalA~l~a~ 83 (140)
T PF01764_consen 49 QILDALKELVEKYP-DYSIV--ITGHSLGGALASLAAA 83 (140)
T ss_dssp HHHHHHHHHHHHST-TSEEE--EEEETHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccc-Cccch--hhccchHHHHHHHHHH
Confidence 45566666666654 22233 3466 56777655544
No 186
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=59.32 E-value=27 Score=28.20 Aligned_cols=60 Identities=18% Similarity=0.198 Sum_probs=39.6
Q ss_pred CCCeEEEecCCC------CCCChhHHHHHHhcCCCcee--EE-Ee--CCCCCCCCCCChHHHHHHHHHHHhh
Q 026228 179 DKPVLVAWGISD------KYLPQSVAEEFQKGNPNVVK--LQ-MI--EGAGHMPQEDWPEKVVDGLRYFFLN 239 (241)
Q Consensus 179 ~~P~l~i~G~~D------~~~~~~~~~~~~~~~~~~~~--~~-~i--~~agH~~~~e~p~~~~~~l~~fl~~ 239 (241)
+.-+|.|.|+-| ..+|...+.....+++++.. .+ ++ +++.|.-..|+|. +.+.+..||-+
T Consensus 216 ~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~Hs~lhen~~-v~~yv~~FLw~ 286 (288)
T COG4814 216 NTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARHSKLHENPT-VAKYVKNFLWE 286 (288)
T ss_pred CcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchhhccCCChh-HHHHHHHHhhc
Confidence 456888888864 45555555555555554321 11 23 5689999999887 66888889865
No 187
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=56.89 E-value=20 Score=33.60 Aligned_cols=31 Identities=19% Similarity=0.246 Sum_probs=19.9
Q ss_pred eCccccHHHHHHHhcCc----CccCeEEEecCCCC
Q 026228 61 QGFLVGSYGLTWALKNP----SRISKLAILNSPLT 91 (241)
Q Consensus 61 ~g~~gG~~~~~~a~~~p----~~v~~lvl~~~~~~ 91 (241)
.|||+|++..+.++.+| +.|+-++..++|..
T Consensus 187 VGHSMGGiVAra~~tlkn~~~~sVntIITlssPH~ 221 (973)
T KOG3724|consen 187 VGHSMGGIVARATLTLKNEVQGSVNTIITLSSPHA 221 (973)
T ss_pred EeccchhHHHHHHHhhhhhccchhhhhhhhcCccc
Confidence 37766666666666555 56667777777753
No 188
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=56.52 E-value=15 Score=20.87 Aligned_cols=15 Identities=33% Similarity=0.625 Sum_probs=12.7
Q ss_pred CCCceEEeeCCCCCC
Q 026228 6 DAGFHCFAPDWLGFG 20 (241)
Q Consensus 6 ~~~~~via~Dl~G~G 20 (241)
+.+|.+.+||+||+-
T Consensus 11 ~~~y~~~~pdlpg~~ 25 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCF 25 (48)
T ss_dssp SSSEEEEETTCCTCE
T ss_pred CCeEEEEeCCccChh
Confidence 457999999999875
No 189
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=55.92 E-value=32 Score=27.82 Aligned_cols=49 Identities=16% Similarity=0.308 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHH-cCCCC-CeEEEEeCc-cccHHHHHHHhcCcCccCeEEEecC
Q 026228 38 EFHEELDKLLDV-LEVKY-PFFLVVQGF-LVGSYGLTWALKNPSRISKLAILNS 88 (241)
Q Consensus 38 ~~a~~l~~~l~~-l~~~~-~~~lv~~g~-~gG~~~~~~a~~~p~~v~~lvl~~~ 88 (241)
.+-++|.-++++ ..+++ +-.++ || +||.+++..-+.+|+.+....++++
T Consensus 119 fL~~~lkP~Ie~~y~~~~~~~~i~--GhSlGGLfvl~aLL~~p~~F~~y~~~SP 170 (264)
T COG2819 119 FLTEQLKPFIEARYRTNSERTAII--GHSLGGLFVLFALLTYPDCFGRYGLISP 170 (264)
T ss_pred HHHHhhHHHHhcccccCcccceee--eecchhHHHHHHHhcCcchhceeeeecc
Confidence 355566666665 33321 23455 55 4666777777899999999988764
No 190
>PF08197 TT_ORF2a: pORF2a truncated protein; InterPro: IPR013267 Most isolated ORF2 of TT virus (TTV) encode a 49 amino acid protein (pORF2a) because of an in-frame stop codon. ORF2s isolated from G1 TTV encode a 202 amino acid protein (pORF2ab) [].
Probab=55.82 E-value=8.9 Score=21.42 Aligned_cols=13 Identities=38% Similarity=0.746 Sum_probs=10.7
Q ss_pred eEEeeCCCCCCCC
Q 026228 10 HCFAPDWLGFGFS 22 (241)
Q Consensus 10 ~via~Dl~G~G~S 22 (241)
.+-+-|+||||+-
T Consensus 36 airardwpg~gq~ 48 (49)
T PF08197_consen 36 AIRARDWPGYGQG 48 (49)
T ss_pred ceEeccCCCcCCC
Confidence 4678899999974
No 191
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=55.64 E-value=48 Score=28.69 Aligned_cols=54 Identities=15% Similarity=0.188 Sum_probs=31.8
Q ss_pred CCCcCCCceEEeeCCCCC---CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeC
Q 026228 2 SQMSDAGFHCFAPDWLGF---GFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQG 62 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~---G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g 62 (241)
..|.+.|+.|+-|+ +|+ |+.+.-+ ..+.++..+.+...+....+....+||.+|
T Consensus 140 ~~L~~~G~~ii~P~-~g~la~~~~g~gr------~~~~~~I~~~~~~~~~~~~l~gk~vlITgG 196 (399)
T PRK05579 140 ATLRSRGVEIIGPA-SGRLACGDVGPGR------MAEPEEIVAAAERALSPKDLAGKRVLITAG 196 (399)
T ss_pred HHHHHCCCEEECCC-CccccCCCcCCCC------CCCHHHHHHHHHHHhhhcccCCCEEEEeCC
Confidence 34667788888654 454 4444322 225677777777766544455445677656
No 192
>COG4099 Predicted peptidase [General function prediction only]
Probab=54.99 E-value=39 Score=28.09 Aligned_cols=43 Identities=16% Similarity=0.119 Sum_probs=29.7
Q ss_pred HHHHHcCCCCCeEEEEeCccccH-HHHHHHhcCcCccCeEEEecC
Q 026228 45 KLLDVLEVKYPFFLVVQGFLVGS-YGLTWALKNPSRISKLAILNS 88 (241)
Q Consensus 45 ~~l~~l~~~~~~~lv~~g~~gG~-~~~~~a~~~p~~v~~lvl~~~ 88 (241)
.+.++-++++.-+.| .|.|+|+ .++.++..+|+.+.+.++++.
T Consensus 259 vlas~ynID~sRIYv-iGlSrG~~gt~al~~kfPdfFAaa~~iaG 302 (387)
T COG4099 259 VLASTYNIDRSRIYV-IGLSRGGFGTWALAEKFPDFFAAAVPIAG 302 (387)
T ss_pred HHhhccCcccceEEE-EeecCcchhhHHHHHhCchhhheeeeecC
Confidence 344566776543333 3776655 467888899999999998875
No 193
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=51.96 E-value=14 Score=29.53 Aligned_cols=13 Identities=23% Similarity=0.618 Sum_probs=11.0
Q ss_pred CCCcCCCceEEee
Q 026228 2 SQMSDAGFHCFAP 14 (241)
Q Consensus 2 ~~L~~~~~~via~ 14 (241)
+.|+++||.|||.
T Consensus 41 e~La~~Gy~ViAt 53 (250)
T PF07082_consen 41 ERLADRGYAVIAT 53 (250)
T ss_pred HHHHhCCcEEEEE
Confidence 5688999999985
No 194
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=51.85 E-value=15 Score=31.55 Aligned_cols=53 Identities=21% Similarity=0.435 Sum_probs=36.1
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----cCCCCCeEEEEeCccccHH
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDV----LEVKYPFFLVVQGFLVGSY 68 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~----l~~~~~~~lv~~g~~gG~~ 68 (241)
.|.++|+.||.+|=.=|=.|.+ +.+..++|+..+++. .+.. +++|| |+|-|+=
T Consensus 282 ~l~~~gvpVvGvdsLRYfW~~r----------tPe~~a~Dl~r~i~~y~~~w~~~-~~~li--GySfGAD 338 (456)
T COG3946 282 ALQKQGVPVVGVDSLRYFWSER----------TPEQIAADLSRLIRFYARRWGAK-RVLLI--GYSFGAD 338 (456)
T ss_pred HHHHCCCceeeeehhhhhhccC----------CHHHHHHHHHHHHHHHHHhhCcc-eEEEE--eecccch
Confidence 4678899999999776766655 346677777776653 5544 45665 8876653
No 195
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=51.73 E-value=24 Score=27.88 Aligned_cols=51 Identities=18% Similarity=0.212 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHHHHcCCCC---CeEEEEeCccccHH-HHHH--HhcCcCccCeEEEec
Q 026228 35 TENEFHEELDKLLDVLEVKY---PFFLVVQGFLVGSY-GLTW--ALKNPSRISKLAILN 87 (241)
Q Consensus 35 ~~~~~a~~l~~~l~~l~~~~---~~~lv~~g~~gG~~-~~~~--a~~~p~~v~~lvl~~ 87 (241)
++++=+++|..++++++... .++|+ ||+.|.- .+.| ...-|..|+..|+.+
T Consensus 85 slk~D~edl~~l~~Hi~~~~fSt~vVL~--GhSTGcQdi~yYlTnt~~~r~iraaIlqA 141 (299)
T KOG4840|consen 85 SLKDDVEDLKCLLEHIQLCGFSTDVVLV--GHSTGCQDIMYYLTNTTKDRKIRAAILQA 141 (299)
T ss_pred cccccHHHHHHHHHHhhccCcccceEEE--ecCccchHHHHHHHhccchHHHHHHHHhC
Confidence 34555789999999887543 55665 7777764 2332 234566677665554
No 196
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=50.54 E-value=43 Score=28.35 Aligned_cols=38 Identities=18% Similarity=0.411 Sum_probs=23.6
Q ss_pred CCCCeEEEEeCccccHHHHHHHh-----c-CcCccCeEEEecCCCC
Q 026228 52 VKYPFFLVVQGFLVGSYGLTWAL-----K-NPSRISKLAILNSPLT 91 (241)
Q Consensus 52 ~~~~~~lv~~g~~gG~~~~~~a~-----~-~p~~v~~lvl~~~~~~ 91 (241)
-++++.|| |||.|+-....|+ + .-..|..++++.+|..
T Consensus 218 G~RpVtLv--G~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~ 261 (345)
T PF05277_consen 218 GERPVTLV--GHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVP 261 (345)
T ss_pred CCCceEEE--eecccHHHHHHHHHHHHhccccCeEeeEEEecCCCC
Confidence 35678888 6666654332222 2 2345899999988764
No 197
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=50.51 E-value=19 Score=31.07 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=0.0
Q ss_pred eEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCC-----CCChHHHHHHHHHH
Q 026228 182 VLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQ-----EDWPEKVVDGLRYF 236 (241)
Q Consensus 182 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~-----~e~p~~~~~~l~~f 236 (241)
+|+|+|+.|++. ....-......+..+.+.||.+|... .+..++....|..|
T Consensus 354 mlFVYG~nDPW~---A~~f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~W 410 (448)
T PF05576_consen 354 MLFVYGENDPWS---AEPFRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRW 410 (448)
T ss_pred EEEEeCCCCCcc---cCccccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHH
No 198
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=49.10 E-value=26 Score=27.41 Aligned_cols=37 Identities=22% Similarity=0.282 Sum_probs=26.4
Q ss_pred eEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCCC
Q 026228 182 VLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMPQ 222 (241)
Q Consensus 182 ~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~~ 222 (241)
...+.|++|.++|+.-.+..-+.. ..++.+ +++|++.
T Consensus 168 d~aiIg~~D~IFpp~nQ~~~W~~~---~~~~~~-~~~Hy~F 204 (213)
T PF04301_consen 168 DKAIIGKKDRIFPPENQKRAWQGR---CTIVEI-DAPHYPF 204 (213)
T ss_pred cEEEEcCCCEEeCHHHHHHHHhCc---CcEEEe-cCCCcCc
Confidence 357899999999987665554422 245666 5899986
No 199
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=48.96 E-value=43 Score=26.05 Aligned_cols=36 Identities=25% Similarity=0.300 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCeEEEEeCccccHH-HHHHH
Q 026228 36 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWA 73 (241)
Q Consensus 36 ~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~-~~~~a 73 (241)
..+..+....+|++.+-+++++|+ |||-|+. ..++-
T Consensus 77 y~DV~~AF~~yL~~~n~GRPfILa--GHSQGs~~l~~LL 113 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNNGRPFILA--GHSQGSMHLLRLL 113 (207)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEE--EeChHHHHHHHHH
Confidence 356777788889999888898886 6676654 44443
No 200
>PF10929 DUF2811: Protein of unknown function (DUF2811); InterPro: IPR021231 This is a bacterial family of uncharacterised proteins.
Probab=48.48 E-value=18 Score=21.64 Aligned_cols=20 Identities=15% Similarity=0.365 Sum_probs=16.9
Q ss_pred CCCChHHHHHHHHHHHhhcC
Q 026228 222 QEDWPEKVVDGLRYFFLNYT 241 (241)
Q Consensus 222 ~~e~p~~~~~~l~~fl~~~~ 241 (241)
.-|-||.+.+.|++||++|.
T Consensus 3 ~aeiPe~L~~~m~~fie~hP 22 (57)
T PF10929_consen 3 EAEIPEDLHQAMKDFIETHP 22 (57)
T ss_pred cccccHHHHHHHHHHHHcCC
Confidence 35779999999999999874
No 201
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=47.44 E-value=25 Score=32.06 Aligned_cols=53 Identities=13% Similarity=0.129 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHH---cCCCCCeEEEEeCcc-ccHHHHHHHhc--C---------c----CccCeEEEecCCCC
Q 026228 37 NEFHEELDKLLDV---LEVKYPFFLVVQGFL-VGSYGLTWALK--N---------P----SRISKLAILNSPLT 91 (241)
Q Consensus 37 ~~~a~~l~~~l~~---l~~~~~~~lv~~g~~-gG~~~~~~a~~--~---------p----~~v~~lvl~~~~~~ 91 (241)
+.|-..|+.+++. ++-.++++|| +|| ||.+.+.+-.. . + ..|++.|.+++|+.
T Consensus 193 d~YF~rLK~lIE~ay~~nggkKVVLV--~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~l 264 (642)
T PLN02517 193 DQTLSRLKSNIELMVATNGGKKVVVV--PHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPFL 264 (642)
T ss_pred hHHHHHHHHHHHHHHHHcCCCeEEEE--EeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheecccccC
Confidence 3454556666653 3434567776 454 55555554321 1 1 25788888887653
No 202
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=45.60 E-value=63 Score=25.12 Aligned_cols=52 Identities=19% Similarity=0.239 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHHHHHc---CCCCCeEEEEeCc-cccHHHHHHHhcCcCccCeEEEec
Q 026228 35 TENEFHEELDKLLDVL---EVKYPFFLVVQGF-LVGSYGLTWALKNPSRISKLAILN 87 (241)
Q Consensus 35 ~~~~~a~~l~~~l~~l---~~~~~~~lv~~g~-~gG~~~~~~a~~~p~~v~~lvl~~ 87 (241)
.+...++.+..++++. |+...-++| +|. +||+.++..+..+|..+.+.+-..
T Consensus 70 ~~~~aa~~i~~Li~~e~~~Gi~~~rI~i-gGfs~G~a~aL~~~~~~~~~l~G~~~~s 125 (206)
T KOG2112|consen 70 GLHRAADNIANLIDNEPANGIPSNRIGI-GGFSQGGALALYSALTYPKALGGIFALS 125 (206)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccceeE-cccCchHHHHHHHHhccccccceeeccc
Confidence 3455677777777643 554333344 466 567788888999998888876554
No 203
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=45.59 E-value=1.3e+02 Score=25.04 Aligned_cols=62 Identities=18% Similarity=0.280 Sum_probs=43.4
Q ss_pred CCCeEEEecCCCCCCChhHH---HHHHhcCCCce-eEEEeCCCCCCCC---CCChHHHHHHHHHHHhhc
Q 026228 179 DKPVLVAWGISDKYLPQSVA---EEFQKGNPNVV-KLQMIEGAGHMPQ---EDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~---~~~~~~~~~~~-~~~~i~~agH~~~---~e~p~~~~~~l~~fl~~~ 240 (241)
++-.+-+-|+.|.+.-.... ..+...+|..- +...=+++||+-- ---.+++...|++|+.+|
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~ 407 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRY 407 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHh
Confidence 46788899999998755444 44445555432 3344599999844 345688999999999876
No 204
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=45.41 E-value=49 Score=29.36 Aligned_cols=60 Identities=20% Similarity=0.272 Sum_probs=42.1
Q ss_pred CCeEEEecCCCCCCChhHH----HHHHhcC-------CCceeEEEeCCCCCCCCCC--ChHHHHHHHHHHHhh
Q 026228 180 KPVLVAWGISDKYLPQSVA----EEFQKGN-------PNVVKLQMIEGAGHMPQED--WPEKVVDGLRYFFLN 239 (241)
Q Consensus 180 ~P~l~i~G~~D~~~~~~~~----~~~~~~~-------~~~~~~~~i~~agH~~~~e--~p~~~~~~l~~fl~~ 239 (241)
-.+++.||..|+.+|+..+ +++.+.. .+-.++..+||.+|.---. .+-.....|.+|.++
T Consensus 354 GKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~ 426 (474)
T PF07519_consen 354 GKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVEN 426 (474)
T ss_pred CeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhC
Confidence 5899999999999987544 2223333 2345889999999996533 445677788888764
No 205
>PLN02606 palmitoyl-protein thioesterase
Probab=45.18 E-value=69 Score=26.58 Aligned_cols=37 Identities=11% Similarity=0.017 Sum_probs=26.3
Q ss_pred CCeEEEEeCccccHHHHH-HHhcCcC--ccCeEEEecCCCCC
Q 026228 54 YPFFLVVQGFLVGSYGLT-WALKNPS--RISKLAILNSPLTA 92 (241)
Q Consensus 54 ~~~~lv~~g~~gG~~~~~-~a~~~p~--~v~~lvl~~~~~~~ 92 (241)
+.+.+| |+|-|+..++ ++-+.|+ .|+.+|.+++|...
T Consensus 95 ~G~naI--GfSQGglflRa~ierc~~~p~V~nlISlggph~G 134 (306)
T PLN02606 95 EGYNIV--AESQGNLVARGLIEFCDNAPPVINYVSLGGPHAG 134 (306)
T ss_pred CceEEE--EEcchhHHHHHHHHHCCCCCCcceEEEecCCcCC
Confidence 356776 7776666555 4556776 49999999998654
No 206
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=45.13 E-value=22 Score=29.23 Aligned_cols=25 Identities=28% Similarity=0.337 Sum_probs=19.8
Q ss_pred Cc-cccHHHHHHHhcCcCccCeEEEe
Q 026228 62 GF-LVGSYGLTWALKNPSRISKLAIL 86 (241)
Q Consensus 62 g~-~gG~~~~~~a~~~p~~v~~lvl~ 86 (241)
|. .||.+++..+++||+++..++.-
T Consensus 183 G~SlGG~vsL~agl~~Pe~FG~V~s~ 208 (299)
T COG2382 183 GDSLGGLVSLYAGLRHPERFGHVLSQ 208 (299)
T ss_pred ccccccHHHHHHHhcCchhhceeecc
Confidence 44 57778888899999999987444
No 207
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=44.56 E-value=38 Score=29.47 Aligned_cols=47 Identities=19% Similarity=0.283 Sum_probs=26.1
Q ss_pred CCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCCCCCC-----CCCChHHHH
Q 026228 180 KPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGAGHMP-----QEDWPEKVV 230 (241)
Q Consensus 180 ~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~agH~~-----~~e~p~~~~ 230 (241)
.-+++..|+.|++....... .....+..++|+|++|.. ..+.|+++.
T Consensus 377 tnviFtNG~~DPW~~lgv~~----~~~~~~~~~~I~g~~Hc~Dl~~~~~~D~~~l~ 428 (434)
T PF05577_consen 377 TNVIFTNGELDPWRALGVTS----DSSDSVPAIVIPGGAHCSDLYPPNPNDPPELK 428 (434)
T ss_dssp -SEEEEEETT-CCGGGS--S-----SSSSEEEEEETT--TTGGGS---TT--HHHH
T ss_pred CeEEeeCCCCCCcccccCCC----CCCCCcccEEECCCeeeccccCCCCCCCHHHH
Confidence 37999999999998665332 223335678899999983 345555553
No 208
>PLN02633 palmitoyl protein thioesterase family protein
Probab=43.89 E-value=79 Score=26.33 Aligned_cols=37 Identities=14% Similarity=0.067 Sum_probs=26.0
Q ss_pred CCeEEEEeCccccHHHHH-HHhcCcC--ccCeEEEecCCCCC
Q 026228 54 YPFFLVVQGFLVGSYGLT-WALKNPS--RISKLAILNSPLTA 92 (241)
Q Consensus 54 ~~~~lv~~g~~gG~~~~~-~a~~~p~--~v~~lvl~~~~~~~ 92 (241)
+-+++| |+|-|+..++ ++-+.|+ .|+.+|-+++|...
T Consensus 94 ~G~naI--GfSQGGlflRa~ierc~~~p~V~nlISlggph~G 133 (314)
T PLN02633 94 QGYNIV--GRSQGNLVARGLIEFCDGGPPVYNYISLAGPHAG 133 (314)
T ss_pred CcEEEE--EEccchHHHHHHHHHCCCCCCcceEEEecCCCCC
Confidence 356776 7776665554 4556776 59999999998643
No 209
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=43.75 E-value=29 Score=31.57 Aligned_cols=44 Identities=20% Similarity=0.418 Sum_probs=30.4
Q ss_pred CC-CCCeEEEecCCCCCCChhH-HHHHH---hc---CCCceeEEEeCCCCCC
Q 026228 177 SW-DKPVLVAWGISDKYLPQSV-AEEFQ---KG---NPNVVKLQMIEGAGHM 220 (241)
Q Consensus 177 ~~-~~P~l~i~G~~D~~~~~~~-~~~~~---~~---~~~~~~~~~i~~agH~ 220 (241)
++ .+|++++||+.|..+|... ++.+. +. .....+++++.++=||
T Consensus 552 ~L~GKPaIiVhGR~DaLlPvnh~Sr~Y~~ln~~~eG~~s~lrYyeV~naqHf 603 (690)
T PF10605_consen 552 NLHGKPAIIVHGRSDALLPVNHTSRPYLGLNRQVEGRASRLRYYEVTNAQHF 603 (690)
T ss_pred CcCCCceEEEecccceecccCCCchHHHHHhhhhcccccceeEEEecCCeec
Confidence 45 7899999999999998742 22222 21 1122578888999898
No 210
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=43.17 E-value=51 Score=25.66 Aligned_cols=14 Identities=36% Similarity=0.423 Sum_probs=8.6
Q ss_pred eCc-cccHHHHHHHh
Q 026228 61 QGF-LVGSYGLTWAL 74 (241)
Q Consensus 61 ~g~-~gG~~~~~~a~ 74 (241)
.|| +||++|..+++
T Consensus 133 tGHSLGGaiA~l~a~ 147 (229)
T cd00519 133 TGHSLGGALASLLAL 147 (229)
T ss_pred EccCHHHHHHHHHHH
Confidence 467 56777665554
No 211
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=42.15 E-value=96 Score=26.78 Aligned_cols=81 Identities=17% Similarity=0.214 Sum_probs=41.7
Q ss_pred CCcCCCceEEeeCCCC--CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH-cCCCCCeEEEEeCc--------------cc
Q 026228 3 QMSDAGFHCFAPDWLG--FGFSDKPEKGYDDFDFTENEFHEELDKLLDV-LEVKYPFFLVVQGF--------------LV 65 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G--~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~-l~~~~~~~lv~~g~--------------~g 65 (241)
.|.+.|+.|+-|.--= ||+...-+ ..+.+++.+.+...+.. -.+....++|.+|- |.
T Consensus 137 ~L~~~G~~vv~P~~g~~ac~~~g~g~------~~~~~~i~~~v~~~~~~~~~~~~~~vlit~g~t~E~iD~VR~itN~SS 210 (390)
T TIGR00521 137 RLKDDGYIFIEPDSGLLACGDEGKGR------LAEPETIVKAAEREFSPKEDLEGKRVLITAGPTREPIDPVRFISNLSS 210 (390)
T ss_pred HHHHCCcEEECCCCcccccccccCCC------CCCHHHHHHHHHHHHhhccccCCceEEEecCCccCCCCceeeecCCCc
Confidence 4666787766665322 25544322 12567777777776654 12333345665551 34
Q ss_pred cHHHHHHHhcCcCccCeEEEecCC
Q 026228 66 GSYGLTWALKNPSRISKLAILNSP 89 (241)
Q Consensus 66 G~~~~~~a~~~p~~v~~lvl~~~~ 89 (241)
|.++..+|...-.+=..++++..+
T Consensus 211 G~~g~~~a~~~~~~Ga~V~~~~g~ 234 (390)
T TIGR00521 211 GKMGLALAEAAYKRGADVTLITGP 234 (390)
T ss_pred chHHHHHHHHHHHCCCEEEEeCCC
Confidence 545554444333334556676654
No 212
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=42.02 E-value=79 Score=23.35 Aligned_cols=40 Identities=25% Similarity=0.336 Sum_probs=24.8
Q ss_pred CcCCCceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEE
Q 026228 4 MSDAGFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLV 59 (241)
Q Consensus 4 L~~~~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv 59 (241)
+.+ |-+||+.|.+|=-. +-+.+|+.+..+.+. | .+-.++|
T Consensus 64 i~~-~~~vi~Ld~~Gk~~-------------sSe~fA~~l~~~~~~-G-~~i~f~I 103 (155)
T COG1576 64 IPK-GSYVVLLDIRGKAL-------------SSEEFADFLERLRDD-G-RDISFLI 103 (155)
T ss_pred cCC-CCeEEEEecCCCcC-------------ChHHHHHHHHHHHhc-C-CeEEEEE
Confidence 444 56899999998222 336678888777443 6 4433444
No 213
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=40.91 E-value=44 Score=28.98 Aligned_cols=85 Identities=21% Similarity=0.318 Sum_probs=51.4
Q ss_pred CCcCCCceEEeeCCCCCCCCCCCCC--C---CCCCCCCHHH-----HHHHHHHHHHHcCCCCCeEEEEeCccccHH-HHH
Q 026228 3 QMSDAGFHCFAPDWLGFGFSDKPEK--G---YDDFDFTENE-----FHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLT 71 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~G~S~~p~~--~---~~~~~~~~~~-----~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~-~~~ 71 (241)
.|+++||.|----.||--.|.+... + ..=.++|+.+ +-+.|.-.++.-+-++ .+.| |||-|.. .+.
T Consensus 101 ~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~k-l~yv--GHSQGtt~~fv 177 (403)
T KOG2624|consen 101 LLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEK-LHYV--GHSQGTTTFFV 177 (403)
T ss_pred HHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccc-eEEE--EEEccchhhee
Confidence 4788999999999999777753321 0 0002334443 3445555556656554 6666 6665543 444
Q ss_pred HHhcCcC---ccCeEEEecCCC
Q 026228 72 WALKNPS---RISKLAILNSPL 90 (241)
Q Consensus 72 ~a~~~p~---~v~~lvl~~~~~ 90 (241)
.+...|+ +|+..++++++.
T Consensus 178 ~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 178 MLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred hhcccchhhhhhheeeeecchh
Confidence 4445554 799998887644
No 214
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=40.25 E-value=51 Score=26.52 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=26.3
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCCc---eeEEEeCCCCCC
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNV---VKLQMIEGAGHM 220 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~---~~~~~i~~agH~ 220 (241)
++++|+|++.|-.|..+.....+.+....... .++++=| -+|.
T Consensus 226 ~i~vP~l~v~Gw~D~~~~~~~~~~~~~l~~~~~~~~~Liigp-w~H~ 271 (272)
T PF02129_consen 226 KIDVPVLIVGGWYDTLFLRGALRAYEALRAPGSKPQRLIIGP-WTHG 271 (272)
T ss_dssp G--SEEEEEEETTCSSTSHHHHHHHHHHCTTSTC-EEEEEES-ESTT
T ss_pred hCCCCEEEecccCCcccchHHHHHHHHhhcCCCCCCEEEEeC-CCCC
Confidence 68999999999999666666666655544332 1454433 4553
No 215
>PLN02408 phospholipase A1
Probab=39.12 E-value=66 Score=27.49 Aligned_cols=35 Identities=23% Similarity=0.262 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHh
Q 026228 39 FHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWAL 74 (241)
Q Consensus 39 ~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~ 74 (241)
..+.|..++++-.-+. .-++.+|| +||++|...|.
T Consensus 184 Vl~eI~~ll~~y~~~~-~sI~vTGHSLGGALAtLaA~ 219 (365)
T PLN02408 184 VREEIARLLQSYGDEP-LSLTITGHSLGAALATLTAY 219 (365)
T ss_pred HHHHHHHHHHhcCCCC-ceEEEeccchHHHHHHHHHH
Confidence 3445556666554332 22233467 56777654443
No 216
>PLN02162 triacylglycerol lipase
Probab=39.10 E-value=1e+02 Score=27.30 Aligned_cols=31 Identities=16% Similarity=0.302 Sum_probs=15.6
Q ss_pred HHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHH
Q 026228 39 FHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTW 72 (241)
Q Consensus 39 ~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~ 72 (241)
+-+.+.+++++-. +..++ .+|| +||++|...
T Consensus 264 I~~~L~~lL~k~p-~~kli--VTGHSLGGALAtLa 295 (475)
T PLN02162 264 IRQMLRDKLARNK-NLKYI--LTGHSLGGALAALF 295 (475)
T ss_pred HHHHHHHHHHhCC-CceEE--EEecChHHHHHHHH
Confidence 3445555555533 22233 3466 577776554
No 217
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=37.55 E-value=89 Score=19.63 Aligned_cols=17 Identities=29% Similarity=0.468 Sum_probs=13.9
Q ss_pred cCCCceEEeeCCCCCCC
Q 026228 5 SDAGFHCFAPDWLGFGF 21 (241)
Q Consensus 5 ~~~~~~via~Dl~G~G~ 21 (241)
.+.+|-+..||+||+=.
T Consensus 12 ~dg~y~~~~Pdlpgc~s 28 (73)
T COG1598 12 EDGGYVASVPDLPGCHS 28 (73)
T ss_pred CCCCEEEEeCCCCCccc
Confidence 45689999999999854
No 218
>PF02540 NAD_synthase: NAD synthase; InterPro: IPR022310 NAD+ synthase (6.3.5.1 from EC) catalyzes the last step in the biosynthesis of nicotinamide adenine dinucleotide and is induced by stress factors such as heat shock and glucose limitation. The three-dimensional structure of NH3-dependent NAD+ synthetase from Bacillus subtilis, in its free form and in complex with ATP shows that the enzyme consists of a tight homodimer with alpha/beta subunit topology []. Catalyzes the synthesis of GMP from XMP. The protein is a homodimer, but in the archaea it is a heterodimer composed of a glutamine amidotransferase subunit (A) and a GMP-binding subunit (B). This entry contains the GMP-binding subunit (B). ; PDB: 2VXO_A 3UOW_B 3N05_A 2DPL_B 3A4I_A 3SEQ_D 3SZG_A 3SYT_A 3SDB_A 3SEZ_C ....
Probab=37.55 E-value=55 Score=26.09 Aligned_cols=46 Identities=13% Similarity=0.129 Sum_probs=30.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCeEEEEeCccccH---HHHHHHh--cCcCccCeEEE
Q 026228 36 ENEFHEELDKLLDVLEVKYPFFLVVQGFLVGS---YGLTWAL--KNPSRISKLAI 85 (241)
Q Consensus 36 ~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~---~~~~~a~--~~p~~v~~lvl 85 (241)
++.+++.|.+.+++.|.++ +++ |.|||- +++.+|. ..|++|-++++
T Consensus 2 ~~~l~~~L~~~~~~~g~~~-vVv---glSGGiDSav~A~La~~Alg~~~v~~v~m 52 (242)
T PF02540_consen 2 IEALVDFLRDYVKKSGAKG-VVV---GLSGGIDSAVVAALAVKALGPDNVLAVIM 52 (242)
T ss_dssp HHHHHHHHHHHHHHHTTSE-EEE---EETSSHHHHHHHHHHHHHHGGGEEEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCe-EEE---EcCCCCCHHHHHHHHHHHhhhcccccccc
Confidence 3567888899999988764 444 677772 4444443 34788877655
No 219
>PF08013 Tagatose_6_P_K: Tagatose 6 phosphate kinase; InterPro: IPR012062 Escherichia coli and other enteric bacteria contain two closely related D-tagatose 1,6-bisphosphate (TagBP)-specific aldolases involved in catabolism of galactitol (genes gatY gatZ) and of N-acetyl-galactosamine and D-galactosamine (genes kbaY, kbaZ, also called agaY, agaZ). The catalytic subunits GatY/KbaY alone are sufficient to show aldolase activity and contain most or all of the residues that have been identified as essential in substrate/product recognition and catalysis for class II aldolases [, ]. However, these aldolases differ from other Class II aldolases (which are homodimeric enzymes) in that they require subunits GatZ/KbaZ for full activity and for good in vivo and in vitro stability. The Z subunits alone do not show any aldolase activity []. It should be noted that the previous suggestion of a tagatose 6P-kinase function for AgaZ [] and other members of this family turned out to be erroneous [, ].; GO: 0019402 galactitol metabolic process; PDB: 2FIQ_A 3TXV_A.
Probab=37.32 E-value=47 Score=28.78 Aligned_cols=31 Identities=13% Similarity=0.213 Sum_probs=22.1
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCeEEEEeCcc
Q 026228 34 FTENEFHEELDKLLDVLEVKYPFFLVVQGFL 64 (241)
Q Consensus 34 ~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~ 64 (241)
++..++.+.|.++.++.|++..-+++|++|.
T Consensus 62 mtP~dF~~~V~~iA~~~g~~~~~iiLGGDHL 92 (424)
T PF08013_consen 62 MTPADFRDFVREIADEVGFPRDRIILGGDHL 92 (424)
T ss_dssp B-HHHHHHHHHHHHHHCT--GGGEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHcCCchhhEEecCCCC
Confidence 4778999999999999999864455666663
No 220
>PLN02571 triacylglycerol lipase
Probab=36.87 E-value=67 Score=27.92 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHcCCCC-CeEEEEeCc-cccHHHHHHHh
Q 026228 38 EFHEELDKLLDVLEVKY-PFFLVVQGF-LVGSYGLTWAL 74 (241)
Q Consensus 38 ~~a~~l~~~l~~l~~~~-~~~lv~~g~-~gG~~~~~~a~ 74 (241)
++.++|..+++...-+. .+++ .|| +||++|...|.
T Consensus 209 qvl~eV~~L~~~y~~e~~sI~V--TGHSLGGALAtLaA~ 245 (413)
T PLN02571 209 QVLNEVGRLVEKYKDEEISITI--CGHSLGAALATLNAV 245 (413)
T ss_pred HHHHHHHHHHHhcCcccccEEE--eccchHHHHHHHHHH
Confidence 45556666666544332 2333 466 56677655443
No 221
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=36.62 E-value=1.6e+02 Score=22.71 Aligned_cols=51 Identities=14% Similarity=0.088 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHHHHHHcCCCCCeEEEEeCcc---ccHHHHHHHh-cCcCccCeEEEe
Q 026228 34 FTENEFHEELDKLLDVLEVKYPFFLVVQGFL---VGSYGLTWAL-KNPSRISKLAIL 86 (241)
Q Consensus 34 ~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~---gG~~~~~~a~-~~p~~v~~lvl~ 86 (241)
|+.+.+++.|.+++++.+. + ++++++... |+.++.++|. ..-..+..++-+
T Consensus 91 ~~~e~~a~al~~~i~~~~p-~-lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 91 ADTLATAKALAAAIKKIGV-D-LILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CChHHHHHHHHHHHHHhCC-C-EEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 3557899999999998773 3 555543222 4456666554 334466665544
No 222
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=36.56 E-value=34 Score=30.26 Aligned_cols=48 Identities=23% Similarity=0.472 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHcCCCCCeEEEEeCccccHHH-HHHHh-cCcCccCeEEEecCC
Q 026228 37 NEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG-LTWAL-KNPSRISKLAILNSP 89 (241)
Q Consensus 37 ~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~-~~~a~-~~p~~v~~lvl~~~~ 89 (241)
..+.+.|..-|+.||.++. -||..|.|+|+++ +.+++ ..| ..|+++=|
T Consensus 339 ~~I~~~I~~~L~~LgF~~~-qLILSGlSMGTfgAlYYga~l~P----~AIiVgKP 388 (511)
T TIGR03712 339 QGIINVIQEKLDYLGFDHD-QLILSGLSMGTFGALYYGAKLSP----HAIIVGKP 388 (511)
T ss_pred HHHHHHHHHHHHHhCCCHH-HeeeccccccchhhhhhcccCCC----ceEEEcCc
Confidence 4577788888999999753 5666788899884 45554 455 34555444
No 223
>PF03283 PAE: Pectinacetylesterase
Probab=36.39 E-value=1.2e+02 Score=25.83 Aligned_cols=48 Identities=21% Similarity=0.248 Sum_probs=26.5
Q ss_pred HHHHHHHHcCCCCCeEEEEeCccccHHHHH-----HHhcCcCccCeEEEecCCC
Q 026228 42 ELDKLLDVLEVKYPFFLVVQGFLVGSYGLT-----WALKNPSRISKLAILNSPL 90 (241)
Q Consensus 42 ~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~-----~a~~~p~~v~~lvl~~~~~ 90 (241)
.|..+++. |+.++-.+|..|.|.|+++.. +....|..++-..+.++..
T Consensus 143 vl~~l~~~-gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~ 195 (361)
T PF03283_consen 143 VLDDLLSN-GLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGF 195 (361)
T ss_pred HHHHHHHh-cCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccc
Confidence 34444444 555444445567777777543 2345776666555666644
No 224
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=36.04 E-value=42 Score=26.36 Aligned_cols=24 Identities=21% Similarity=0.317 Sum_probs=18.1
Q ss_pred CCCeEEEecCCCCCCChhHHHHHH
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQ 202 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~ 202 (241)
..|++++||+.|..+.+.-...+.
T Consensus 169 ~~P~~v~hG~~D~tV~~~n~~~~~ 192 (220)
T PF10503_consen 169 GYPRIVFHGTADTTVNPQNADQLV 192 (220)
T ss_pred CCCEEEEecCCCCccCcchHHHHH
Confidence 469999999999988765444433
No 225
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=35.14 E-value=1.5e+02 Score=27.20 Aligned_cols=74 Identities=16% Similarity=0.255 Sum_probs=40.5
Q ss_pred ceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCC--CCCeEEEEeCc-cccHHHHHH-----HhcCcC--
Q 026228 9 FHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEV--KYPFFLVVQGF-LVGSYGLTW-----ALKNPS-- 78 (241)
Q Consensus 9 ~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~--~~~~~lv~~g~-~gG~~~~~~-----a~~~p~-- 78 (241)
|+-...|++++-.+..+.. ++..-++.+.+.+++-++ +++++.| || +||.++=.+ .-..|+
T Consensus 486 Y~Tsit~w~~~~p~e~~r~-------sl~~Rs~~lleql~~~~VG~~RPivwI--~HSmGGLl~K~lLlda~~S~kP~ms 556 (697)
T KOG2029|consen 486 YTTSITDWRARCPAEAHRR-------SLAARSNELLEQLQAAGVGDDRPIVWI--GHSMGGLLAKKLLLDAYCSSKPDMS 556 (697)
T ss_pred cccchhhhcccCcccchhh-------HHHHHHHHHHHHHHHhccCCCCceEEE--ecccchHHHHHHHHHHhhcCCchhh
Confidence 5555566777555544332 344455556666665554 5777777 45 667664222 123443
Q ss_pred ----ccCeEEEecCCCC
Q 026228 79 ----RISKLAILNSPLT 91 (241)
Q Consensus 79 ----~v~~lvl~~~~~~ 91 (241)
..++++.+..|+.
T Consensus 557 ~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 557 NLNKNTRGIIFLSVPHR 573 (697)
T ss_pred hhhccCCceEEEecCCC
Confidence 3556777776653
No 226
>PLN02324 triacylglycerol lipase
Probab=34.78 E-value=80 Score=27.47 Aligned_cols=34 Identities=21% Similarity=0.285 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHH
Q 026228 39 FHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWA 73 (241)
Q Consensus 39 ~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a 73 (241)
+.+.|..++++-.-++ +-++.+|| +||++|...|
T Consensus 199 Vl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA 233 (415)
T PLN02324 199 VQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSA 233 (415)
T ss_pred HHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHH
Confidence 4445556666544332 22333477 5667765544
No 227
>KOG2486 consensus Predicted GTPase [General function prediction only]
Probab=33.41 E-value=83 Score=25.92 Aligned_cols=18 Identities=17% Similarity=0.172 Sum_probs=13.8
Q ss_pred ceEEeeCCCCCCCCCCCC
Q 026228 9 FHCFAPDWLGFGFSDKPE 26 (241)
Q Consensus 9 ~~via~Dl~G~G~S~~p~ 26 (241)
-+-+.+||||||+.+...
T Consensus 183 ~~~~~vDlPG~~~a~y~~ 200 (320)
T KOG2486|consen 183 KSWYEVDLPGYGRAGYGF 200 (320)
T ss_pred ceEEEEecCCcccccCCc
Confidence 456889999999876543
No 228
>PLN02802 triacylglycerol lipase
Probab=32.51 E-value=91 Score=27.90 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHH
Q 026228 39 FHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWA 73 (241)
Q Consensus 39 ~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a 73 (241)
..+.|..+++.-.-++ .-++.+|| +||++|...|
T Consensus 314 Vl~eV~~Ll~~Y~~e~-~sI~VTGHSLGGALAtLaA 348 (509)
T PLN02802 314 VVGEVRRLMEKYKGEE-LSITVTGHSLGAALALLVA 348 (509)
T ss_pred HHHHHHHHHHhCCCCc-ceEEEeccchHHHHHHHHH
Confidence 3344555555543332 22233477 5677765443
No 229
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=31.93 E-value=1.4e+02 Score=25.39 Aligned_cols=62 Identities=18% Similarity=0.211 Sum_probs=49.0
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhc---CCCceeEEEeCCCCCCCC-CCChHHHHHHHHHHHhhc
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKG---NPNVVKLQMIEGAGHMPQ-EDWPEKVVDGLRYFFLNY 240 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~---~~~~~~~~~i~~agH~~~-~e~p~~~~~~l~~fl~~~ 240 (241)
..+.+.+.+..|.++|.+.++.+.+. -...++.+-+.++-|..| -.+|-...+.+.+|++..
T Consensus 225 ~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~~p~~y~~~~~~Fl~~~ 290 (350)
T KOG2521|consen 225 PWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRSFPKTYLKKCSEFLRSV 290 (350)
T ss_pred cccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeeccCcHHHHHHHHHHHHhc
Confidence 57889999999999999888777432 222356777788999987 489999999999999753
No 230
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=31.65 E-value=2.4e+02 Score=25.20 Aligned_cols=82 Identities=17% Similarity=0.227 Sum_probs=45.2
Q ss_pred CCCcCCCceEEeeCCCC----CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHc---CCCCCeEEEE--------------
Q 026228 2 SQMSDAGFHCFAPDWLG----FGFSDKPEKGYDDFDFTENEFHEELDKLLDVL---EVKYPFFLVV-------------- 60 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G----~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l---~~~~~~~lv~-------------- 60 (241)
..|.+.|++|+-|+- | +|+.+.-+- .+.+++++.+..++... .+...-+||.
T Consensus 204 ~~L~~~G~~vi~P~~-g~lA~~g~~G~Grm------~e~~~I~~~v~~~~~~~~~~~l~gkkvLITaGpT~E~IDpVR~I 276 (475)
T PRK13982 204 AQLKRDGVHMIGPNA-GEMAERGEAGVGRM------AEPLEIAAAAEALLRPPQPKPLAGRRVLITAGPTHEPIDPVRYI 276 (475)
T ss_pred HHHHHCCCEEECCCC-CccccCCCcCCCCC------CCHHHHHHHHHHHHhhccccccCCCEEEEecCCccccCCcceee
Confidence 356778999997764 4 566554331 24567777777776431 1222223332
Q ss_pred eCccccHHHHHHHhcCcCccCeEEEecCCC
Q 026228 61 QGFLVGSYGLTWALKNPSRISKLAILNSPL 90 (241)
Q Consensus 61 ~g~~gG~~~~~~a~~~p~~v~~lvl~~~~~ 90 (241)
..+|.|-+|..+|...-.+=..++++.+|.
T Consensus 277 tN~SSGkmG~alA~aa~~~GA~VtlI~Gp~ 306 (475)
T PRK13982 277 ANRSSGKQGFAIAAAAAAAGAEVTLISGPV 306 (475)
T ss_pred CCCCchHHHHHHHHHHHHCCCcEEEEeCCc
Confidence 234666665555443333345678887654
No 231
>PLN02454 triacylglycerol lipase
Probab=31.20 E-value=1e+02 Score=26.81 Aligned_cols=13 Identities=31% Similarity=0.171 Sum_probs=8.0
Q ss_pred eCc-cccHHHHHHH
Q 026228 61 QGF-LVGSYGLTWA 73 (241)
Q Consensus 61 ~g~-~gG~~~~~~a 73 (241)
.|| +||++|...|
T Consensus 233 TGHSLGGALAtLaA 246 (414)
T PLN02454 233 TGHSLGASLATLAA 246 (414)
T ss_pred EecCHHHHHHHHHH
Confidence 466 5677766554
No 232
>COG3596 Predicted GTPase [General function prediction only]
Probab=30.60 E-value=67 Score=26.32 Aligned_cols=34 Identities=21% Similarity=0.204 Sum_probs=25.3
Q ss_pred CceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcC
Q 026228 8 GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLE 51 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~ 51 (241)
+...+.+|.||+|++..-+ ..+.+.+.+.+.+++
T Consensus 86 ~~~l~lwDtPG~gdg~~~D----------~~~r~~~~d~l~~~D 119 (296)
T COG3596 86 GENLVLWDTPGLGDGKDKD----------AEHRQLYRDYLPKLD 119 (296)
T ss_pred ccceEEecCCCcccchhhh----------HHHHHHHHHHhhhcc
Confidence 4567899999999986522 347777888887765
No 233
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=30.48 E-value=2.5e+02 Score=23.31 Aligned_cols=76 Identities=21% Similarity=0.121 Sum_probs=37.2
Q ss_pred eEEeeCCC-CCCCCCCCCCCCCCCCCCH---HHHHHHHHHHHHHcC--CCCCeEEEEeCccccHHHHHHHh----cC---
Q 026228 10 HCFAPDWL-GFGFSDKPEKGYDDFDFTE---NEFHEELDKLLDVLE--VKYPFFLVVQGFLVGSYGLTWAL----KN--- 76 (241)
Q Consensus 10 ~via~Dl~-G~G~S~~p~~~~~~~~~~~---~~~a~~l~~~l~~l~--~~~~~~lv~~g~~gG~~~~~~a~----~~--- 76 (241)
.|+-+|.| |-|.|-...... ..-+. +++...|..|++... ..+++++.| -+.+|.++-.+|. ..
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~--~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~G-ESYaG~YiP~la~~I~~~n~~~ 79 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPID--KTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVG-DSYSGMIVPALVQEISQGNYIC 79 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCC--ccccHHHHHHHHHHHHHHHHhCcccccCCeEEEe-eccccchHHHHHHHHHhhcccc
Confidence 58999999 888884322111 01111 334444444544332 134566543 2246765433332 12
Q ss_pred ---cCccCeEEEecC
Q 026228 77 ---PSRISKLAILNS 88 (241)
Q Consensus 77 ---p~~v~~lvl~~~ 88 (241)
+=.++++++=|+
T Consensus 80 ~~~~inLkGi~IGNg 94 (319)
T PLN02213 80 CEPPINLQGYMLGNP 94 (319)
T ss_pred cCCceeeeEEEeCCC
Confidence 125778766553
No 234
>cd01852 AIG1 AIG1 (avrRpt2-induced gene 1). This represents Arabidoposis protein AIG1 that appears to be involved in plant resistance to bacteria. The Arabidopsis disease resistance gene RPS2 is involved in recognition of bacterial pathogens carrying the avirulence gene avrRpt2. AIG1 exhibits RPS2- and avrRpt1-dependent induction early after infection with Pseudomonas syringae carrying avrRpt2. This subfamily also includes IAN-4 protein, which has GTP-binding activity and shares sequence homology with a novel family of putative GTP-binding proteins: the immuno-associated nucleotide (IAN) family. The evolutionary conservation of the IAN family provides a unique example of a plant pathogen response gene conserved in animals. The IAN/IMAP subfamily has been proposed to regulate apoptosis in vertebrates and angiosperm plants, particularly in relation to cancer, diabetes, and infections. The human IAN genes were renamed GIMAP (GTPase of the immunity associated proteins).
Probab=30.39 E-value=1.8e+02 Score=21.90 Aligned_cols=17 Identities=18% Similarity=-0.066 Sum_probs=14.6
Q ss_pred CceEEeeCCCCCCCCCC
Q 026228 8 GFHCFAPDWLGFGFSDK 24 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~ 24 (241)
|.++..+|-||++.+..
T Consensus 48 ~~~i~viDTPG~~d~~~ 64 (196)
T cd01852 48 GRRVNVIDTPGLFDTSV 64 (196)
T ss_pred CeEEEEEECcCCCCccC
Confidence 57899999999998754
No 235
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=30.06 E-value=1.8e+02 Score=23.71 Aligned_cols=51 Identities=27% Similarity=0.455 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHc----CCCCCeEEEEeCccccHHHH-HHHhc------CcCccCeEEEecCCCC
Q 026228 37 NEFHEELDKLLDVL----EVKYPFFLVVQGFLVGSYGL-TWALK------NPSRISKLAILNSPLT 91 (241)
Q Consensus 37 ~~~a~~l~~~l~~l----~~~~~~~lv~~g~~gG~~~~-~~a~~------~p~~v~~lvl~~~~~~ 91 (241)
.+++..+...|..| ++++ +.+| |||+|+.++ .|... +| .++.+|.+++|+.
T Consensus 116 ~~~s~wlk~~msyL~~~Y~i~k-~n~V--GhSmGg~~~~~Y~~~yg~dks~P-~lnK~V~l~gpfN 177 (288)
T COG4814 116 LDQSKWLKKAMSYLQKHYNIPK-FNAV--GHSMGGLGLTYYMIDYGDDKSLP-PLNKLVSLAGPFN 177 (288)
T ss_pred hhHHHHHHHHHHHHHHhcCCce-eeee--eeccccHHHHHHHHHhcCCCCCc-chhheEEeccccc
Confidence 34556666555555 5654 5666 665555544 34433 44 4888999887754
No 236
>PLN00413 triacylglycerol lipase
Probab=29.95 E-value=1.6e+02 Score=26.21 Aligned_cols=49 Identities=18% Similarity=0.395 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHh----cCc----CccCeEEEecCC
Q 026228 38 EFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWAL----KNP----SRISKLAILNSP 89 (241)
Q Consensus 38 ~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~----~~p----~~v~~lvl~~~~ 89 (241)
.+.+.|..++++-.- ..+++ +|| +||++|...|+ ..+ +++.++...++|
T Consensus 269 ~i~~~Lk~ll~~~p~-~kliV--TGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~P 326 (479)
T PLN00413 269 TILRHLKEIFDQNPT-SKFIL--SGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQP 326 (479)
T ss_pred HHHHHHHHHHHHCCC-CeEEE--EecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCC
Confidence 355677777776442 23333 466 57777655442 222 344455565554
No 237
>PF15660 Imm49: Immunity protein 49
Probab=29.75 E-value=39 Score=20.60 Aligned_cols=20 Identities=15% Similarity=0.338 Sum_probs=16.7
Q ss_pred CCCHHHHHHHHHHHHHHcCC
Q 026228 33 DFTENEFHEELDKLLDVLEV 52 (241)
Q Consensus 33 ~~~~~~~a~~l~~~l~~l~~ 52 (241)
.|.+.++.+|+++|++.|.-
T Consensus 63 lyrlrdwtddladwvdrlrr 82 (84)
T PF15660_consen 63 LYRLRDWTDDLADWVDRLRR 82 (84)
T ss_pred hhhhhhhhhHHHHHHHHHhh
Confidence 36778999999999998854
No 238
>PF13709 DUF4159: Domain of unknown function (DUF4159)
Probab=29.52 E-value=1.7e+02 Score=22.72 Aligned_cols=38 Identities=16% Similarity=0.061 Sum_probs=31.5
Q ss_pred CCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEeCCC
Q 026228 179 DKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMIEGA 217 (241)
Q Consensus 179 ~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~a 217 (241)
..|.+.+.|..+..++.+....+.+.+.+. -+.+++.+
T Consensus 53 ~yP~ly~~g~~~~~~s~~e~~~Lr~Yl~~G-Gfl~~D~~ 90 (207)
T PF13709_consen 53 FYPFLYWPGHGDFPLSDEEIANLRRYLENG-GFLLFDDR 90 (207)
T ss_pred hCCEEEEeCCCCCCCCHHHHHHHHHHHHcC-CEEEEECC
Confidence 579999999999888888888888877765 67788776
No 239
>KOG3086 consensus Predicted dioxygenase [General function prediction only]
Probab=29.36 E-value=1.9e+02 Score=23.29 Aligned_cols=55 Identities=16% Similarity=0.373 Sum_probs=38.4
Q ss_pred CHHHHHHHHHHHHHHcCCCCC--eEEEE--eCcc-ccHH-HHHHHhcCcCccCeEEEecCC
Q 026228 35 TENEFHEELDKLLDVLEVKYP--FFLVV--QGFL-VGSY-GLTWALKNPSRISKLAILNSP 89 (241)
Q Consensus 35 ~~~~~a~~l~~~l~~l~~~~~--~~lv~--~g~~-gG~~-~~~~a~~~p~~v~~lvl~~~~ 89 (241)
+..++.++|..|+.+.+..+. -.+|. .|++ -|.. +..++--.|..|+++.++++.
T Consensus 18 ~~~~Ls~QL~~wL~~~~~~~~paRaiIaPHAGY~YcG~~Aa~ay~qvdps~v~RIFILGPS 78 (296)
T KOG3086|consen 18 SGPQLSAQLEGWLSQVTLTKGPARAIIAPHAGYTYCGSCAAYAYKQVDPSNVQRIFILGPS 78 (296)
T ss_pred CHHHHHHHHHHHHhccCCCCCCceEEEcCCCCcccchHHHHHHHhhcChhHeeEEEEecCc
Confidence 457899999999999887532 23332 2552 3544 445666789999999999854
No 240
>TIGR02883 spore_cwlD N-acetylmuramoyl-L-alanine amidase CwlD. Members of this protein family are the CwlD family of N-acetylmuramoyl-L-alanine amidase. This family has been called the germination-specific N-acetylmuramoyl-L-alanine amidase. CwlD is required, along with the putative deactylase PdaA, to make muramic delta-lactam, a novel peptidoglycan constituent found only in spores. CwlD mutants show a germination defect.
Probab=28.40 E-value=1.5e+02 Score=22.52 Aligned_cols=42 Identities=26% Similarity=0.211 Sum_probs=23.2
Q ss_pred eEEeeCCCCCCCCCCCCCCCC---CCCCCHHHHHHHHHHHHHHcCCC
Q 026228 10 HCFAPDWLGFGFSDKPEKGYD---DFDFTENEFHEELDKLLDVLEVK 53 (241)
Q Consensus 10 ~via~Dl~G~G~S~~p~~~~~---~~~~~~~~~a~~l~~~l~~l~~~ 53 (241)
++|++| ||||.++.=..+.+ +..++ -+++..+...|++.|++
T Consensus 1 k~I~iD-pGHGg~d~GA~~~~g~~E~~~~-l~ia~~l~~~L~~~G~~ 45 (189)
T TIGR02883 1 KIIVID-PGHGGIDGGAVGKDGTLEKDIT-LEIALKLKDYLQEQGAL 45 (189)
T ss_pred CEEEEe-CCCCCCCCCCCCCCCccHHHHH-HHHHHHHHHHHHhCCCE
Confidence 356676 89998753221111 11121 24666777778887763
No 241
>PLN02753 triacylglycerol lipase
Probab=27.99 E-value=1.1e+02 Score=27.46 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=15.9
Q ss_pred HHHHHHHHHHcCCC--CCeEEEEeCc-cccHHHHHHH
Q 026228 40 HEELDKLLDVLEVK--YPFFLVVQGF-LVGSYGLTWA 73 (241)
Q Consensus 40 a~~l~~~l~~l~~~--~~~~lv~~g~-~gG~~~~~~a 73 (241)
-+.|..++++...+ ..+-++.+|| +||++|...|
T Consensus 294 l~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA 330 (531)
T PLN02753 294 LTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSA 330 (531)
T ss_pred HHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHH
Confidence 33445555544321 0122333477 5677765544
No 242
>PRK05406 LamB/YcsF family protein; Provisional
Probab=27.97 E-value=94 Score=24.94 Aligned_cols=13 Identities=38% Similarity=0.603 Sum_probs=10.6
Q ss_pred eeCCCCCCCCCCC
Q 026228 13 APDWLGFGFSDKP 25 (241)
Q Consensus 13 a~Dl~G~G~S~~p 25 (241)
-||+-|||+-...
T Consensus 66 ypD~~gFGRR~m~ 78 (246)
T PRK05406 66 YPDLEGFGRRNMD 78 (246)
T ss_pred CCccCCCCCCCCC
Confidence 4999999997653
No 243
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=27.87 E-value=66 Score=24.17 Aligned_cols=22 Identities=9% Similarity=0.068 Sum_probs=15.8
Q ss_pred CCCcCCCceEEeeCCCCCCCCC
Q 026228 2 SQMSDAGFHCFAPDWLGFGFSD 23 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~G~G~S~ 23 (241)
+++...+|.|..+|+----+.+
T Consensus 21 ~~FkannywV~siDl~eNe~Ad 42 (236)
T KOG4022|consen 21 EFFKANNYWVLSIDLSENEQAD 42 (236)
T ss_pred HHHHhcCeEEEEEeeccccccc
Confidence 3456678999999998654443
No 244
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=27.64 E-value=99 Score=26.39 Aligned_cols=71 Identities=18% Similarity=0.297 Sum_probs=38.0
Q ss_pred ceEEeeCCCCCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHH-----HHHhcC--
Q 026228 9 FHCFAPDWLGFGFS-----DKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGL-----TWALKN-- 76 (241)
Q Consensus 9 ~~via~Dl~G~G~S-----~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~-----~~a~~~-- 76 (241)
.-+|.+-||--|.- |+.. -.|+-.++...|..+.+....++ ++|++ ||+|.+.+ +++.+.
T Consensus 147 ~~pVvFSWPS~g~l~~Yn~DreS-----~~~Sr~aLe~~lr~La~~~~~~~-I~ilA--HSMGtwl~~e~LrQLai~~~~ 218 (377)
T COG4782 147 GVPVVFSWPSRGSLLGYNYDRES-----TNYSRPALERLLRYLATDKPVKR-IYLLA--HSMGTWLLMEALRQLAIRADR 218 (377)
T ss_pred cceEEEEcCCCCeeeecccchhh-----hhhhHHHHHHHHHHHHhCCCCce-EEEEE--ecchHHHHHHHHHHHhccCCc
Confidence 34666777754432 1211 13455566666666666666665 66664 46665433 344443
Q ss_pred --cCccCeEEEec
Q 026228 77 --PSRISKLAILN 87 (241)
Q Consensus 77 --p~~v~~lvl~~ 87 (241)
+.+++-+|+..
T Consensus 219 ~l~~ki~nViLAa 231 (377)
T COG4782 219 PLPAKIKNVILAA 231 (377)
T ss_pred chhhhhhheEeeC
Confidence 33677766654
No 245
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=27.49 E-value=2.2e+02 Score=23.34 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=22.0
Q ss_pred CCeEEEEeCccccHHHHHH-HhcCcC-ccCeEEEecCCCCC
Q 026228 54 YPFFLVVQGFLVGSYGLTW-ALKNPS-RISKLAILNSPLTA 92 (241)
Q Consensus 54 ~~~~lv~~g~~gG~~~~~~-a~~~p~-~v~~lvl~~~~~~~ 92 (241)
.-+++| |+|-|+..++. +-+.|+ .|+.+|.+++|...
T Consensus 80 ~G~~~I--GfSQGgl~lRa~vq~c~~~~V~nlISlggph~G 118 (279)
T PF02089_consen 80 NGFNAI--GFSQGGLFLRAYVQRCNDPPVHNLISLGGPHMG 118 (279)
T ss_dssp T-EEEE--EETCHHHHHHHHHHH-TSS-EEEEEEES--TT-
T ss_pred cceeee--eeccccHHHHHHHHHCCCCCceeEEEecCcccc
Confidence 457777 77877765553 445554 69999999998654
No 246
>PLN02310 triacylglycerol lipase
Probab=27.37 E-value=2.3e+02 Score=24.71 Aligned_cols=50 Identities=22% Similarity=0.321 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHcC--CCCCeEEEEeCc-cccHHHHHHHh----cCcCccCeEEEecCC
Q 026228 39 FHEELDKLLDVLE--VKYPFFLVVQGF-LVGSYGLTWAL----KNPSRISKLAILNSP 89 (241)
Q Consensus 39 ~a~~l~~~l~~l~--~~~~~~lv~~g~-~gG~~~~~~a~----~~p~~v~~lvl~~~~ 89 (241)
..+.|..+++... -+. .-++.+|| +||++|...|. ..|+.--.++..++|
T Consensus 191 Vl~eV~~L~~~y~~~~e~-~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsP 247 (405)
T PLN02310 191 VMQEVKRLVNFYRGKGEE-VSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAP 247 (405)
T ss_pred HHHHHHHHHHhhcccCCc-ceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCC
Confidence 4445556665542 121 22223466 56777655443 244432234455554
No 247
>KOG3101 consensus Esterase D [General function prediction only]
Probab=27.18 E-value=7.2 Score=30.47 Aligned_cols=26 Identities=35% Similarity=0.491 Sum_probs=19.0
Q ss_pred Cc-cccHHHHHHHhcCcCccCeEEEec
Q 026228 62 GF-LVGSYGLTWALKNPSRISKLAILN 87 (241)
Q Consensus 62 g~-~gG~~~~~~a~~~p~~v~~lvl~~ 87 (241)
|| |||.-++..++++|++.+++....
T Consensus 147 GHSMGGhGAl~~~Lkn~~kykSvSAFA 173 (283)
T KOG3101|consen 147 GHSMGGHGALTIYLKNPSKYKSVSAFA 173 (283)
T ss_pred ccccCCCceEEEEEcCcccccceeccc
Confidence 66 455556677899999999876553
No 248
>PRK12569 hypothetical protein; Provisional
Probab=26.75 E-value=1e+02 Score=24.70 Aligned_cols=13 Identities=31% Similarity=0.432 Sum_probs=10.6
Q ss_pred eeCCCCCCCCCCC
Q 026228 13 APDWLGFGFSDKP 25 (241)
Q Consensus 13 a~Dl~G~G~S~~p 25 (241)
-||+-|||+-...
T Consensus 69 yPD~~gFGRr~m~ 81 (245)
T PRK12569 69 FRDLVGFGRRHIN 81 (245)
T ss_pred CCcCCCCCCCCCC
Confidence 4999999997654
No 249
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=26.61 E-value=1.1e+02 Score=24.83 Aligned_cols=48 Identities=23% Similarity=0.165 Sum_probs=31.1
Q ss_pred CCCCeEEEecCCCC---------CCChh--HHHHHHhcCCCceeEEEeCCCCCCCCCCCh
Q 026228 178 WDKPVLVAWGISDK---------YLPQS--VAEEFQKGNPNVVKLQMIEGAGHMPQEDWP 226 (241)
Q Consensus 178 ~~~P~l~i~G~~D~---------~~~~~--~~~~~~~~~~~~~~~~~i~~agH~~~~e~p 226 (241)
.++|+++|-..-+. +.|.+ ..+.+.+..+. .-..+..+.||+=+++..
T Consensus 153 ~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p-~~~~v~~~~GH~d~LDd~ 211 (259)
T PF12740_consen 153 FSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPP-SWHFVAKDYGHMDFLDDD 211 (259)
T ss_pred CCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCC-EEEEEeCCCCchHhhcCC
Confidence 46999988666663 45544 22444454444 456677999999887766
No 250
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=26.53 E-value=17 Score=28.68 Aligned_cols=16 Identities=6% Similarity=0.023 Sum_probs=13.2
Q ss_pred CCCcCCCceEEeeCCC
Q 026228 2 SQMSDAGFHCFAPDWL 17 (241)
Q Consensus 2 ~~L~~~~~~via~Dl~ 17 (241)
..|+++||+|+++|+-
T Consensus 59 ~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 59 LFFLSKGVKVIGIELS 74 (226)
T ss_pred HHHHhCCCcEEEEecC
Confidence 4578899999999973
No 251
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=26.32 E-value=2e+02 Score=23.70 Aligned_cols=47 Identities=19% Similarity=0.261 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHcCCCCCeEE--EEeCccccHHHHHHHhcCcCccCeEEE
Q 026228 37 NEFHEELDKLLDVLEVKYPFFL--VVQGFLVGSYGLTWALKNPSRISKLAI 85 (241)
Q Consensus 37 ~~~a~~l~~~l~~l~~~~~~~l--v~~g~~gG~~~~~~a~~~p~~v~~lvl 85 (241)
+....-+...+++|+++.--.| ||+|| |+++..+|..+-.+|-++.+
T Consensus 55 eAQ~~k~~~~~~kl~L~~G~~lLDiGCGW--G~l~~~aA~~y~v~V~GvTl 103 (283)
T COG2230 55 EAQRAKLDLILEKLGLKPGMTLLDIGCGW--GGLAIYAAEEYGVTVVGVTL 103 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCCh--hHHHHHHHHHcCCEEEEeeC
Confidence 3455677788899998754444 45553 66777777788777777755
No 252
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=25.89 E-value=84 Score=23.17 Aligned_cols=33 Identities=30% Similarity=0.348 Sum_probs=23.6
Q ss_pred EeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEE
Q 026228 12 FAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFL 58 (241)
Q Consensus 12 ia~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~l 58 (241)
|-||.+|.|.. ..+.+.+.+-.+++|+++.+.|
T Consensus 73 V~pd~r~~G~G--------------~~Ll~~~~~~Ar~~gi~~lf~L 105 (153)
T COG1246 73 VHPDYRGSGRG--------------ERLLERLLADARELGIKELFVL 105 (153)
T ss_pred ECHHhcCCCcH--------------HHHHHHHHHHHHHcCCceeeee
Confidence 44567877764 3467778888899999885544
No 253
>COG3150 Predicted esterase [General function prediction only]
Probab=25.63 E-value=2.3e+02 Score=21.55 Aligned_cols=49 Identities=24% Similarity=0.338 Sum_probs=31.0
Q ss_pred CHHHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHHHHhcCcCccCeEEEecCC
Q 026228 35 TENEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLTWALKNPSRISKLAILNSP 89 (241)
Q Consensus 35 ~~~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~~a~~~p~~v~~lvl~~~~ 89 (241)
+....++.|...+.+++-+++ .+| |. .||-++..++.++- +++ |++|+.
T Consensus 41 ~p~~a~~ele~~i~~~~~~~p-~iv--GssLGGY~At~l~~~~G--ira-v~~NPa 90 (191)
T COG3150 41 DPQQALKELEKAVQELGDESP-LIV--GSSLGGYYATWLGFLCG--IRA-VVFNPA 90 (191)
T ss_pred CHHHHHHHHHHHHHHcCCCCc-eEE--eecchHHHHHHHHHHhC--Chh-hhcCCC
Confidence 456788899999999887654 444 44 45555666655443 444 466653
No 254
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=25.61 E-value=93 Score=25.86 Aligned_cols=77 Identities=12% Similarity=0.290 Sum_probs=48.7
Q ss_pred ceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCc---cccHHHHHHHhcCcCccCeEEE
Q 026228 9 FHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLVVQGF---LVGSYGLTWALKNPSRISKLAI 85 (241)
Q Consensus 9 ~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~---~gG~~~~~~a~~~p~~v~~lvl 85 (241)
..|+.-|+----.-+.... .+++++|.+-+.+++..+|-+ .+++-.+-- ..+++++.-+...|..-++.++
T Consensus 131 ~~vyitDW~dAr~Vp~~~G-----~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtl 204 (415)
T COG4553 131 HDVYITDWVDARMVPLEAG-----HFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTL 204 (415)
T ss_pred cceeEeeccccceeecccC-----CccHHHHHHHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeee
Confidence 5677788775433222121 347799999999999999975 333321111 1233444445578888999999
Q ss_pred ecCCCC
Q 026228 86 LNSPLT 91 (241)
Q Consensus 86 ~~~~~~ 91 (241)
+++|.-
T Consensus 205 mGgPID 210 (415)
T COG4553 205 MGGPID 210 (415)
T ss_pred ecCccc
Confidence 998763
No 255
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=25.20 E-value=1.8e+02 Score=20.76 Aligned_cols=28 Identities=14% Similarity=0.191 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHcCCCCCeEEEEeCccc
Q 026228 38 EFHEELDKLLDVLEVKYPFFLVVQGFLV 65 (241)
Q Consensus 38 ~~a~~l~~~l~~l~~~~~~~lv~~g~~g 65 (241)
...+.|.+.+..-.-+++.+|.-||++|
T Consensus 36 ~v~~ai~~~l~~~~p~KpLVlSfHG~tG 63 (127)
T PF06309_consen 36 VVVNAIKGHLANPNPRKPLVLSFHGWTG 63 (127)
T ss_pred HHHHHHHHHHcCCCCCCCEEEEeecCCC
Confidence 3444555555544445554444466655
No 256
>COG1866 PckA Phosphoenolpyruvate carboxykinase (ATP) [Energy production and conversion]
Probab=24.72 E-value=1.1e+02 Score=26.89 Aligned_cols=31 Identities=32% Similarity=0.613 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHcCCCCCeEEEEeCccccHHH
Q 026228 37 NEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYG 69 (241)
Q Consensus 37 ~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~ 69 (241)
..|++.|.+.|++.|.+ +.||=.||.||+++
T Consensus 404 ~~YA~~L~~~i~~~~~~--vyLvNTGWtGg~yg 434 (529)
T COG1866 404 TRYAELLGKLIKAHGAN--VYLVNTGWTGGAYG 434 (529)
T ss_pred hHHHHHHHHHHHHcCCc--EEEEecCccCCCCC
Confidence 57999999999999974 45777799887553
No 257
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=24.60 E-value=32 Score=26.05 Aligned_cols=27 Identities=19% Similarity=0.453 Sum_probs=19.6
Q ss_pred CccccH-HHHHHHhcCcCccCeEEEecC
Q 026228 62 GFLVGS-YGLTWALKNPSRISKLAILNS 88 (241)
Q Consensus 62 g~~gG~-~~~~~a~~~p~~v~~lvl~~~ 88 (241)
|.++|+ .+..+..++|+...++|.++.
T Consensus 107 gcsmGayhA~nfvfrhP~lftkvialSG 134 (227)
T COG4947 107 GCSMGAYHAANFVFRHPHLFTKVIALSG 134 (227)
T ss_pred ccchhhhhhhhhheeChhHhhhheeecc
Confidence 555554 477788889998888877764
No 258
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=24.10 E-value=17 Score=31.09 Aligned_cols=17 Identities=12% Similarity=0.141 Sum_probs=10.8
Q ss_pred CCcCCCceEEeeCCCCC
Q 026228 3 QMSDAGFHCFAPDWLGF 19 (241)
Q Consensus 3 ~L~~~~~~via~Dl~G~ 19 (241)
.||.+||=|+++|-|..
T Consensus 122 eLAS~GyVV~aieHrDg 138 (379)
T PF03403_consen 122 ELASHGYVVAAIEHRDG 138 (379)
T ss_dssp HHHHTT-EEEEE---SS
T ss_pred HHHhCCeEEEEeccCCC
Confidence 57889999999999953
No 259
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=23.68 E-value=1e+02 Score=23.19 Aligned_cols=50 Identities=12% Similarity=0.153 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHcCCCCCeEEEEeCccccHH-HHHHHhc------CcCccCeEEEecCCCC
Q 026228 39 FHEELDKLLDVLEVKYPFFLVVQGFLVGSY-GLTWALK------NPSRISKLAILNSPLT 91 (241)
Q Consensus 39 ~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~-~~~~a~~------~p~~v~~lvl~~~~~~ 91 (241)
+.+.|.+..++=. +.+++| .|+|-|+. +..+... ..++|.+++++..|..
T Consensus 67 ~~~~i~~~~~~CP-~~kivl--~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 67 LVRLIEEYAARCP-NTKIVL--AGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHST-TSEEEE--EEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHhCC-CCCEEE--EecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 3444444444422 334544 48886654 3333322 4578899999987653
No 260
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=23.42 E-value=1.9e+02 Score=22.60 Aligned_cols=44 Identities=16% Similarity=0.292 Sum_probs=25.5
Q ss_pred CCcCCCceEEeeCC------------CCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHHHHcC
Q 026228 3 QMSDAGFHCFAPDW------------LGFGFSDKPEKGYDDFDFTE-NEFHEELDKLLDVLE 51 (241)
Q Consensus 3 ~L~~~~~~via~Dl------------~G~G~S~~p~~~~~~~~~~~-~~~a~~l~~~l~~l~ 51 (241)
.|+..|+||++.|+ +|||....=. -+.+- ++....+.++.+.+|
T Consensus 33 ~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~-----~DVS~a~~v~~~l~e~~k~~g 89 (256)
T KOG1200|consen 33 LLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFS-----CDVSKAHDVQNTLEEMEKSLG 89 (256)
T ss_pred HHHhcCcEEEEeecchhhHHHHHhhcCCCCccceee-----eccCcHHHHHHHHHHHHHhcC
Confidence 47788999998875 5555432211 01122 333344777778877
No 261
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=22.84 E-value=1.1e+02 Score=22.59 Aligned_cols=38 Identities=16% Similarity=0.229 Sum_probs=23.6
Q ss_pred CceEEeeCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCCCeEEE
Q 026228 8 GFHCFAPDWLGFGFSDKPEKGYDDFDFTENEFHEELDKLLDVLEVKYPFFLV 59 (241)
Q Consensus 8 ~~~via~Dl~G~G~S~~p~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~~lv 59 (241)
+-.||+.|-.|--. +-+++|+.|..+... |..+-.++|
T Consensus 67 ~~~~i~Ld~~Gk~~-------------sS~~fA~~l~~~~~~-g~~~i~F~I 104 (155)
T PF02590_consen 67 NDYVILLDERGKQL-------------SSEEFAKKLERWMNQ-GKSDIVFII 104 (155)
T ss_dssp TSEEEEE-TTSEE---------------HHHHHHHHHHHHHT-TS-EEEEEE
T ss_pred CCEEEEEcCCCccC-------------ChHHHHHHHHHHHhc-CCceEEEEE
Confidence 56789999987322 336788888888776 554434444
No 262
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=22.78 E-value=3.2e+02 Score=22.30 Aligned_cols=52 Identities=21% Similarity=0.259 Sum_probs=33.1
Q ss_pred CCCCCeEEEecCCCCCCChhHHHHHHhcCCCceeEEEe-CCCCCCCC-CCChHHHHHHHHH
Q 026228 177 SWDKPVLVAWGISDKYLPQSVAEEFQKGNPNVVKLQMI-EGAGHMPQ-EDWPEKVVDGLRY 235 (241)
Q Consensus 177 ~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~~~~~~~i-~~agH~~~-~e~p~~~~~~l~~ 235 (241)
...||+.++.|++ . ..++..+..|+ ++.+.+ ++.|++.- --.|++..+.|++
T Consensus 145 ~~gVPV~lVsGDd-~-----~~~ea~~~~P~-~~tv~vK~~~gr~aA~~~~p~~a~~~I~~ 198 (270)
T cd08769 145 EFGVPVVLVAGDS-E-----LEKEVKEETPW-AVFVPTKESLSRYSAKSPSMKKVKEELRE 198 (270)
T ss_pred hcCCCEEEEecCH-H-----HHHHHHHhCCC-ceEEEEeeecCCCccccCCHHHHHHHHHH
Confidence 3579999999965 2 34555566788 455555 55665544 4556666666554
No 263
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=22.26 E-value=1.7e+02 Score=25.42 Aligned_cols=57 Identities=16% Similarity=0.093 Sum_probs=35.1
Q ss_pred CeEEEecCCCCCCChhHHHHH----HhcCCCceeEEEe-----------CCCCCCCCCCChHHHHHHHHHHHh
Q 026228 181 PVLVAWGISDKYLPQSVAEEF----QKGNPNVVKLQMI-----------EGAGHMPQEDWPEKVVDGLRYFFL 238 (241)
Q Consensus 181 P~l~i~G~~D~~~~~~~~~~~----~~~~~~~~~~~~i-----------~~agH~~~~e~p~~~~~~l~~fl~ 238 (241)
=-...|+..|...|.+.-..+ .++.-+ ++++.| .+..|-.=+.....|...+-..|+
T Consensus 295 ~yvsYHs~~D~~~p~~~K~~l~~~l~~lgfd-a~l~lIkdes~iDGkfIKnl~HGmgis~k~Lf~KeLp~~le 366 (403)
T PF11144_consen 295 IYVSYHSIKDDLAPAEDKEELYEILKNLGFD-ATLHLIKDESEIDGKFIKNLEHGMGISDKALFKKELPLMLE 366 (403)
T ss_pred EEEEEeccCCCCCCHHHHHHHHHHHHHcCCC-eEEEEecChhhccchheeccccCCCCCHHHHHHHHhHHHHH
Confidence 356689999999987655443 344444 577777 344566666555555555554443
No 264
>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.
Probab=22.23 E-value=1.5e+02 Score=22.85 Aligned_cols=41 Identities=22% Similarity=0.203 Sum_probs=24.3
Q ss_pred HHHHHcCCCCCeEEEEeCccccHHHHHHHhcCcCccCeEEEecCC
Q 026228 45 KLLDVLEVKYPFFLVVQGFLVGSYGLTWALKNPSRISKLAILNSP 89 (241)
Q Consensus 45 ~~l~~l~~~~~~~lv~~g~~gG~~~~~~a~~~p~~v~~lvl~~~~ 89 (241)
+..++|...+ +.++|.|.+|+.++..++.. -|..+++++.-
T Consensus 14 ~~q~~L~~~~-V~IvG~GglGs~ia~~La~~---Gvg~i~lvD~D 54 (200)
T TIGR02354 14 KIVQKLEQAT-VAICGLGGLGSNVAINLARA---GIGKLILVDFD 54 (200)
T ss_pred HHHHHHhCCc-EEEECcCHHHHHHHHHHHHc---CCCEEEEECCC
Confidence 4456665544 66665554444456566554 46788898853
No 265
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=22.03 E-value=1.6e+02 Score=24.79 Aligned_cols=32 Identities=22% Similarity=0.416 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHcCCCCCeEEEEeCc-cccHHHHH
Q 026228 37 NEFHEELDKLLDVLEVKYPFFLVVQGF-LVGSYGLT 71 (241)
Q Consensus 37 ~~~a~~l~~~l~~l~~~~~~~lv~~g~-~gG~~~~~ 71 (241)
..+-+++..+++... + +-+..+|| +||++|..
T Consensus 155 ~~~~~~~~~L~~~~~--~-~~i~vTGHSLGgAlA~l 187 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP--N-YSIWVTGHSLGGALASL 187 (336)
T ss_pred HHHHHHHHHHHHhcC--C-cEEEEecCChHHHHHHH
Confidence 456677777777765 2 33344577 56666543
No 266
>PLN02719 triacylglycerol lipase
Probab=21.20 E-value=1.9e+02 Score=26.05 Aligned_cols=14 Identities=36% Similarity=0.439 Sum_probs=8.4
Q ss_pred EeCc-cccHHHHHHH
Q 026228 60 VQGF-LVGSYGLTWA 73 (241)
Q Consensus 60 ~~g~-~gG~~~~~~a 73 (241)
.+|| +||++|...|
T Consensus 302 VTGHSLGGALAtLaA 316 (518)
T PLN02719 302 VTGHSLGGALAVLSA 316 (518)
T ss_pred EecCcHHHHHHHHHH
Confidence 3477 5677765544
No 267
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=20.97 E-value=3.5e+02 Score=23.31 Aligned_cols=54 Identities=17% Similarity=0.249 Sum_probs=31.6
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHHH--hcCcC---ccCeEEEec
Q 026228 32 FDFTENEFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTWA--LKNPS---RISKLAILN 87 (241)
Q Consensus 32 ~~~~~~~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~a--~~~p~---~v~~lvl~~ 87 (241)
++..+.+.++....+++..|.. .++|. |.+-||.+++.+. +..+. .-+++|+++
T Consensus 174 yPtQL~qlv~~Y~~Lv~~~G~~-nI~Lm-GDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLIS 232 (374)
T PF10340_consen 174 YPTQLRQLVATYDYLVESEGNK-NIILM-GDSAGGNLALSFLQYLKKPNKLPYPKSAILIS 232 (374)
T ss_pred CchHHHHHHHHHHHHHhccCCC-eEEEE-ecCccHHHHHHHHHHHhhcCCCCCCceeEEEC
Confidence 3445667777888888777865 45554 2434666655432 23222 246788886
No 268
>COG1540 Uncharacterized proteins, homologs of lactam utilization protein B [General function prediction only]
Probab=20.68 E-value=1.4e+02 Score=23.78 Aligned_cols=17 Identities=35% Similarity=0.481 Sum_probs=12.7
Q ss_pred eEEeeCCCCCCCCCCCC
Q 026228 10 HCFAPDWLGFGFSDKPE 26 (241)
Q Consensus 10 ~via~Dl~G~G~S~~p~ 26 (241)
|.=-||+-|||+.....
T Consensus 63 HPgyPDl~gFGRr~m~~ 79 (252)
T COG1540 63 HPGYPDLVGFGRREMAL 79 (252)
T ss_pred CCCCccccccCccccCC
Confidence 33459999999987643
No 269
>COG0825 AccA Acetyl-CoA carboxylase alpha subunit [Lipid metabolism]
Probab=20.32 E-value=1.4e+02 Score=24.64 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHcCCCCCeEEEEeCccccHHHHHH
Q 026228 38 EFHEELDKLLDVLEVKYPFFLVVQGFLVGSYGLTW 72 (241)
Q Consensus 38 ~~a~~l~~~l~~l~~~~~~~lv~~g~~gG~~~~~~ 72 (241)
.+|..+.++ ..|.+.--.++||-|.|||++++..
T Consensus 176 AIA~nL~em-~~LkvPiI~iVIGEGgSGGALAi~v 209 (317)
T COG0825 176 AIARNLREM-ARLKVPIISIVIGEGGSGGALAIGV 209 (317)
T ss_pred HHHHHHHHH-hCCCCCEEEEEecCCCchhhHHhhH
Confidence 444554444 3344433334455555788776543
Done!