BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>026229
MGNALRFLYGKCCKPLTEEDSGSLGPHGVSAATVGVSALAQDLYHFEITSQVPEGLTRHV
TSSKKAQANWYRKLSEAWREAKPPPTTAEEAARLVIQTLSRHKKADVEGLLAFYGLPLPH
TLIPVSTAEPTTLPAGVDARAIPDGDTITVYVSAADPRESACVPGDVQMAAVRRSKARAE
RNYEQADALHQKIINAGYRLAIHLGDKSSKQRGSSSTKVSNSTKRHRCTREFNAIWERST
E

High Scoring Gene Products

Symbol, full name Information P value
AtCaN2
AT2G40410
protein from Arabidopsis thaliana 1.8e-62
CAN
AT3G56170
protein from Arabidopsis thaliana 2.3e-48

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  026229
        (241 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2063058 - symbol:AtCaN2 "AT2G40410" species:37...   638  1.8e-62   1
TAIR|locus:2078486 - symbol:CAN "Ca-2+ dependent nuclease...   505  2.3e-48   1


>TAIR|locus:2063058 [details] [associations]
            symbol:AtCaN2 "AT2G40410" species:3702 "Arabidopsis
            thaliana" [GO:0004518 "nuclease activity" evidence=ISS] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0004520 "endodeoxyribonuclease
            activity" evidence=IDA] [GO:0004521 "endoribonuclease activity"
            evidence=IDA] [GO:0006308 "DNA catabolic process" evidence=IDA]
            [GO:0006401 "RNA catabolic process" evidence=IDA] [GO:0090305
            "nucleic acid phosphodiester bond hydrolysis" evidence=IDA]
            InterPro:IPR006021 InterPro:IPR016071 Pfam:PF00565 PROSITE:PS50830
            SMART:SM00318 EMBL:CP002685 GO:GO:0003676 GO:GO:0006401
            GO:GO:0004521 GO:GO:0006308 GO:GO:0004520 Gene3D:2.40.50.90
            SUPFAM:SSF50199 IPI:IPI00544581 RefSeq:NP_973649.1 UniGene:At.37055
            ProteinModelPortal:F4IH31 SMR:F4IH31 PRIDE:F4IH31
            EnsemblPlants:AT2G40410.2 GeneID:818634 KEGG:ath:AT2G40410
            OMA:PELAKWE PhylomeDB:F4IH31 Uniprot:F4IH31
        Length = 332

 Score = 638 (229.6 bits), Expect = 1.8e-62, P = 1.8e-62
 Identities = 129/209 (61%), Positives = 156/209 (74%)

Query:     1 MGNALRFLYGKCCKPLTEEDSGSLGPHGVSAATVGVSALAQDLYHFEITSQVPEGLTRHV 60
             MGNAL FLYGKCCKP T +DS  LGPHGVSAATVGVSALA DL++FEITSQVPEGL R+V
Sbjct:     1 MGNALTFLYGKCCKPTTTDDS--LGPHGVSAATVGVSALAHDLFNFEITSQVPEGLGRYV 58

Query:    61 TSSKKAQANWYRKLSEAWRXXXXXXXXXXXXXRLVIQTLSRHKKADVEGLLAFYGLPLPH 120
              SS+KAQANWYRK+ EAW+             RLV   L R++KADVEGLL+FYGLPL H
Sbjct:    59 QSSRKAQANWYRKILEAWKQAKPPPQTAEEASRLVTDILKRNQKADVEGLLSFYGLPLSH 118

Query:   121 TLIPVSTAEPTTLPAG---------VDARAIPDGDTITVYVSAADPRESACVPGDVQMAA 171
             TL+ V+   P +LP G         VD +A+ DGDTITVYVS ++P  S+ VP +V +AA
Sbjct:   119 TLVEVTVEAPVSLPEGILFEFQTLPVDPKAVADGDTITVYVSTSEPVVSSSVPREVNLAA 178

Query:   172 VRRSKARAERNYEQADALHQKIINAGYRL 200
             V+R+KAR +RNY +AD LHQKII++GYR+
Sbjct:   179 VQRAKAREKRNYPKADELHQKIIDSGYRV 207


>TAIR|locus:2078486 [details] [associations]
            symbol:CAN "Ca-2+ dependent nuclease" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004518 "nuclease activity" evidence=IEA;ISS;IDA]
            [GO:0016788 "hydrolase activity, acting on ester bonds"
            evidence=IEA] InterPro:IPR002071 InterPro:IPR006021
            InterPro:IPR016071 Pfam:PF00565 PROSITE:PS01284 PROSITE:PS50830
            SMART:SM00318 EMBL:CP002686 GO:GO:0003676 GO:GO:0004518
            Gene3D:2.40.50.90 SUPFAM:SSF50199 IPI:IPI00546805
            RefSeq:NP_567036.1 UniGene:At.21067 ProteinModelPortal:F4IZC5
            SMR:F4IZC5 PRIDE:F4IZC5 EnsemblPlants:AT3G56170.1 GeneID:824783
            KEGG:ath:AT3G56170 OMA:KWENEAR Uniprot:F4IZC5
        Length = 323

 Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
 Identities = 109/209 (52%), Positives = 139/209 (66%)

Query:     1 MGNALRFLYGKCCKPLTEEDSGSLGPHGVSAATVGVSALAQDLYHFEITSQVPEGLTRHV 60
             MGNA+R L  KC           L  HGVSA++ GVSAL++DL +FE TSQVPE L  +V
Sbjct:     1 MGNAIRLLR-KC-----------LNSHGVSASSGGVSALSRDLLNFETTSQVPEKLGSYV 48

Query:    61 TSSKKAQANWYRKLSEAWRXXXXXXXXXXXXXRLVIQTLSRHKKADVEGLLAFYGLPLPH 120
              SS+KAQANWYRK+ EAW+             RLVI  L  H+KADVEGLL+FYGLP PH
Sbjct:    49 VSSQKAQANWYRKILEAWKQAKPRPKTPEEASRLVIAALKNHQKADVEGLLSFYGLPSPH 108

Query:   121 TLIPVSTAEPTTLPAGV---------DARAIPDGDTITVYVSAADPRESACVPGDVQMAA 171
              L+ V T  P +LP GV         D +++ DGDT+TVYVS+ DP  S+ +P DV +AA
Sbjct:   109 NLVEVPTEAPVSLPKGVRFELNTLPVDTKSVADGDTVTVYVSSKDPLVSSSLPKDVSLAA 168

Query:   172 VRRSKARAERNYEQADALHQKIINAGYRL 200
             V+R+KAR ++NY +ADALH+ II +GYR+
Sbjct:   169 VKRAKAREKKNYTEADALHKTIIASGYRM 197


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.129   0.379    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      241       228   0.00081  113 3  11 22  0.43    33
                                                     32  0.41    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  607 (65 KB)
  Total size of DFA:  178 KB (2103 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.77u 0.12s 19.89t   Elapsed:  00:00:01
  Total cpu time:  19.77u 0.12s 19.89t   Elapsed:  00:00:01
  Start:  Fri May 10 03:56:56 2013   End:  Fri May 10 03:56:57 2013

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