Query 026231
Match_columns 241
No_of_seqs 154 out of 1315
Neff 7.6
Searched_HMMs 13730
Date Mon Mar 25 08:40:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026231.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026231hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2iuwa1 b.82.2.10 (A:70-279) A 100.0 3.6E-43 2.6E-47 293.3 18.2 197 30-240 11-209 (210)
2 d2fdia1 b.82.2.10 (A:15-214) A 100.0 2.5E-33 1.8E-37 232.1 17.6 178 38-239 4-198 (200)
3 d1vrba1 b.82.2.11 (A:8-326) Pu 82.8 6.5 0.00047 30.9 11.2 39 194-238 196-234 (319)
4 d1dcsa_ b.82.2.1 (A:) Deacetox 77.4 1.2 8.8E-05 36.2 4.7 43 195-237 211-264 (311)
5 d2fcta1 b.82.2.9 (A:3-310) Syr 70.4 1.9 0.00014 34.3 4.2 41 195-239 213-254 (308)
6 d1odma_ b.82.2.1 (A:) Isopenic 66.0 2.6 0.00019 34.0 4.2 42 196-237 237-283 (329)
7 d1w9ya1 b.82.2.1 (A:2-308) 1-a 64.9 9 0.00065 30.4 7.4 43 195-237 201-249 (307)
8 d1gp6a_ b.82.2.1 (A:) Anthocya 62.5 10 0.00074 30.4 7.4 43 195-237 255-303 (349)
9 d2a1xa1 b.82.2.9 (A:43-338) Ph 56.6 5.7 0.00042 30.9 4.6 40 195-239 202-241 (296)
10 d1e5ra_ b.82.2.4 (A:) Type II 47.6 7.5 0.00054 31.3 3.9 95 108-236 75-173 (290)
11 d2b8ma1 b.82.1.18 (A:1-108) Hy 34.2 40 0.0029 22.0 5.5 54 131-214 29-82 (108)
12 d1vr3a1 b.82.1.6 (A:1-179) Aci 33.3 20 0.0015 26.5 4.0 39 161-217 97-135 (179)
13 d1v70a_ b.82.1.9 (A:) Hypothet 25.6 73 0.0054 19.9 6.0 52 133-214 33-84 (105)
14 d3nula_ d.110.1.1 (A:) Profili 24.4 59 0.0043 22.2 5.1 51 29-80 23-75 (130)
15 d1h2ka_ b.82.2.6 (A:) Hypoxia- 22.9 25 0.0018 27.9 3.1 37 195-236 245-281 (335)
16 d1zrra1 b.82.1.6 (A:1-179) Aci 22.9 42 0.003 24.6 4.1 36 163-217 107-142 (179)
17 d1yhfa1 b.82.1.9 (A:1-112) Hyp 21.0 50 0.0036 21.4 4.0 51 134-215 43-93 (112)
18 d2arca_ b.82.4.1 (A:) Regulato 20.3 54 0.0039 22.4 4.2 20 198-217 57-76 (161)
No 1
>d2iuwa1 b.82.2.10 (A:70-279) AlkB homolog 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=3.6e-43 Score=293.26 Aligned_cols=197 Identities=32% Similarity=0.566 Sum_probs=161.9
Q ss_pred EEeCCCC-ceEEEeCCCCCHHHHHHHHHHHHhcCCCCCceeeecCeEEeecceeeeeCCCCccceeecCCCCC-CCCCCC
Q 026231 30 VVDLGNG-SEVIYFPRIIKMEDSWKFFDYLNNRIPWNRPTIRVFGRSCLQPRDTCYVASEGVTQLIYSGYRPH-PYSWDD 107 (241)
Q Consensus 30 ~~~l~~~-~~~~~~~~fl~~~ea~~L~~~l~~~~~w~~~~~~~~G~~~~~pR~~~~~~~~g~~~y~ysg~~~~-~~~w~~ 107 (241)
.-..|.| +++.|+||||+++||+.||+.|+++++|.+...+++|+....||+++|+++.. |.|++.... ..+|+
T Consensus 11 ~~~~p~g~~~l~y~p~fLs~~e~~~Ll~~L~~e~~w~~~~~~~~g~~~~~pR~~~~~~d~~---y~y~~~~~~~~~~~~- 86 (210)
T d2iuwa1 11 ISLSPTGVSRVCLYPGFVDVKEADWILEQLCQDVPWKQRTGIREDITYQQPRLTAWYGELP---YTYSRITMEPNPHWH- 86 (210)
T ss_dssp EECCSSSCEEEEEETTSSCHHHHHHHHHHHHHHSCCBCCEEESSSCEEECSSEEEEEECCC---TTSCHHHHCCBSSCC-
T ss_pred eccCCCCcceEEEECCcCCHHHHHHHHHHHHhhCCccccceeccCcccceeeeeEEecCcC---ccccccccccCCCCc-
Confidence 3334444 47999999999999999999999999999999999999999999999998643 777766443 24564
Q ss_pred CchHHHHHHHHHhhcCCCCCceeeeeeecCCCCCcccccCCCCccCCCCeEEEEEcCCceeeEEeeCCCCCCCCchhhhh
Q 026231 108 FPPLKDILDIVLKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPNRRTDDEPVSKR 187 (241)
Q Consensus 108 ~P~L~~~~~~~~e~~~g~~~n~~liN~Y~~G~d~i~~H~D~~~~~g~~~~IasvSLG~~r~f~fr~~~~~~~~~~~~~~~ 187 (241)
|.|..+.+.+.+ .++..+|.|+||+|.+|+++|+||+|++..++++++||+||||++|.|.|+++.......+
T Consensus 87 -~~l~~l~~~~~~-~~~~~~~~~~ln~Y~~~~~~I~~H~D~~~~~~~~~~I~slSlG~~~~~~~r~~~~~~~~~~----- 159 (210)
T d2iuwa1 87 -PVLRTLKNRIEE-NTGHTFNSLLCNLYRNEKDSVDWHSDDEPSLGRCPIIASLSFGATRTFEMRKKPPPEENGD----- 159 (210)
T ss_dssp -HHHHHHHHHHHH-HHSCCCCEEEEEEECSTTCCEEEECCCCGGGCSSCCEEEEEEESCEEEEEEECCC-----------
T ss_pred -HHHHHHHHhhhh-hcCccchhhhhhccccCCCccccCcCCchhcccCCceeEEeeCCceEEEEccccccccCCc-----
Confidence 467776666644 3478899999999999888999999999999999999999999999999998665321110
Q ss_pred hhccCCccceEEEcCCCcEEEEccCccccccccccccCCCCCceEEEeccccc
Q 026231 188 LKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHVL 240 (241)
Q Consensus 188 ~~~~~~~~~~~l~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISlTFR~~~ 240 (241)
......++|.|++|||+||.|++|+.|+|+||+++...++|||||||++.
T Consensus 160 ---~~~~~~~~i~L~~gsl~vm~g~~~~~~~H~Ip~~~~~~~~RiSlTfR~v~ 209 (210)
T d2iuwa1 160 ---YTYVERVKIPLDHGTLLIMEGATQADWQHRVPKEYHSREPRVNLTFRTVY 209 (210)
T ss_dssp -----CCCEEEEEECTTCEEEEEETHHHHEEEEECCCSSCCCCEEEEEEECCC
T ss_pred ---cCCCceEEEEcCCCCEEEeCchhhCceEccCCccCCCCCCeEEEEEEeec
Confidence 11245788999999999999999999999999998889999999999874
No 2
>d2fdia1 b.82.2.10 (A:15-214) Alkylated DNA repair protein AlkB {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=2.5e-33 Score=232.14 Aligned_cols=178 Identities=20% Similarity=0.305 Sum_probs=132.8
Q ss_pred eEEEeCCCCCHHHHHHHHHHHHh---cCCCCCceeeecCeEEeecce----eeeeCCCCccceeecCCCCC-CCCCCCCc
Q 026231 38 EVIYFPRIIKMEDSWKFFDYLNN---RIPWNRPTIRVFGRSCLQPRD----TCYVASEGVTQLIYSGYRPH-PYSWDDFP 109 (241)
Q Consensus 38 ~~~~~~~fl~~~ea~~L~~~l~~---~~~w~~~~~~~~G~~~~~pR~----~~~~~~~g~~~y~ysg~~~~-~~~w~~~P 109 (241)
++.++++|+.++ +.+|++++.+ ..+|++.... .|+.+..... ..|+++.. .|.|++.... ..+|+++|
T Consensus 4 G~v~l~~f~~~~-~~~ll~~~~~~~~~~p~r~~~~p-~g~~msv~~~~~g~~gW~~d~~--~Yry~~~~~~~~~~wp~iP 79 (200)
T d2fdia1 4 GAVILRRFAFNA-AEQLIRDINDVASQSPFRQMVTP-GGYTMSVAMTNCGHLGWTTHRQ--GYLYSPIDPQTNKPWPAMP 79 (200)
T ss_dssp TEEEETTTTTTT-HHHHHHHHHHHHHHSCCBCCBCT-TSCBCSSEEEEESSBEEEEETT--EEEEESBCTTTSSBCCCCC
T ss_pred CEEEECCcCCHH-HHHHHHHHHHHHhhCCceeeecC-CCCcceEEEEeccccccccCCc--CcccccccCCCCCCCCCcc
Confidence 489999998765 4568877653 6799886543 3555433222 24888753 4999887653 56899888
Q ss_pred h-HHHHHHHHHh--hcCCCCCceeeeeeecCCCCCcccc-cCCCCccCCCCeEEEEEcCCceeeEEeeCCCCCCCCchhh
Q 026231 110 P-LKDILDIVLK--VLPGSRFNSLLLNRYKGGNDYVGWH-ADDEKLYGSTPEIASVSFGCERDFLLKIKPNRRTDDEPVS 185 (241)
Q Consensus 110 ~-L~~~~~~~~e--~~~g~~~n~~liN~Y~~G~d~i~~H-~D~~~~~g~~~~IasvSLG~~r~f~fr~~~~~~~~~~~~~ 185 (241)
. |.++++++.+ .+.+..||+||||+|++|+ .|++| .|++..++. +|+|||||++|.|.|++....
T Consensus 80 ~~l~~L~~~~~~~~~~~~~~pn~~LvN~Y~~G~-~~~~h~dddE~~~~~--pIvslSLG~~~~f~f~~~~~~-------- 148 (200)
T d2fdia1 80 QSFHNLCQRAATAAGYPDFQPDACLINRYAPGA-KLSLHQDKDEPDLRA--PIVSVSLGLPAIFQFGGLKRN-------- 148 (200)
T ss_dssp HHHHHHHHHHHHHHTCTTCCCSEEEEEEECTTC-CEEEECCCCSSCTTS--CEEEEEEESCEEEEECCSSTT--------
T ss_pred HHHHHHHHHHHHHcCCCccCCCeeEEEEecCCC-CccccccCCccccCC--CceEEEEeCCeeEEecccccC--------
Confidence 4 6677666643 2345679999999999998 66654 556777754 799999999999999875432
Q ss_pred hhhhccCCccceEEEcCCCcEEEEccCccccccccccccCC-----CCCceEEEecccc
Q 026231 186 KRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAK-----AESTRINLTFRHV 239 (241)
Q Consensus 186 ~~~~~~~~~~~~~l~L~~gsllvM~g~~q~~w~H~Ip~~~~-----~~~~RISlTFR~~ 239 (241)
.....+.|++|||+||.|++|. |+|+|++++. ..+.|||||||+.
T Consensus 149 --------~~~~~~~L~~Gdllvm~G~~r~-~~H~V~~~~~~~~~~~~~~RislTfR~~ 198 (200)
T d2fdia1 149 --------DPLKRLLLEHGDVVVWGGESRL-FYHGIQPLKAGFHPLTIDCRYNLTFRQA 198 (200)
T ss_dssp --------SCCEEEEECTTCEEEECGGGGG-CCEEECCCCCCCBTTTBTCEEEEEEECC
T ss_pred --------CceEEEEcCCCCEEEeCcchhh-eEecCCcccCCCCCCCCCCeEEEEEEec
Confidence 3467899999999999999886 7799999754 3466999999986
No 3
>d1vrba1 b.82.2.11 (A:8-326) Putative asparaginyl hydroxylase YxbC {Bacillus subtilis [TaxId: 1423]}
Probab=82.76 E-value=6.5 Score=30.87 Aligned_cols=39 Identities=26% Similarity=0.341 Sum_probs=26.8
Q ss_pred ccceEEEcCCCcEEEEccCccccccccccccCCCCCceEEEeccc
Q 026231 194 LDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRH 238 (241)
Q Consensus 194 ~~~~~l~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISlTFR~ 238 (241)
.....+.|++||+|.|... |-|.+... ..+--||++||.
T Consensus 196 ~~~~~~~L~pGDvLYiP~g----w~H~v~s~--~~sis~sv~f~~ 234 (319)
T d1vrba1 196 PDAEIVNLTPGTMLYLPRG----LWHSTKSD--QATLALNITFGQ 234 (319)
T ss_dssp CSSEEEEECTTCEEEECTT----CEEEEECS--SCEEEEEEEECC
T ss_pred CccEEEEECCCCEEEeCCC----ceEEeEec--CCeEEEEEEecC
Confidence 3467899999999999765 67777652 223346666763
No 4
>d1dcsa_ b.82.2.1 (A:) Deacetoxycephalosporin C synthase {Streptomyces clavuligerus [TaxId: 1901]}
Probab=77.42 E-value=1.2 Score=36.22 Aligned_cols=43 Identities=21% Similarity=0.189 Sum_probs=30.2
Q ss_pred cceEEEcCCCcEEEEccCcccccc--------ccccccC---CCCCceEEEecc
Q 026231 195 DQHSFTLKHGSMLVMRGYTQRDWI--------HSVPRRA---KAESTRINLTFR 237 (241)
Q Consensus 195 ~~~~l~L~~gsllvM~g~~q~~w~--------H~Ip~~~---~~~~~RISlTFR 237 (241)
.-+.++..+|+++|.-|.+-+.|. |+|-.-. .....|+||.|=
T Consensus 211 ~W~~V~p~pg~lvVNvGD~l~~~TnG~~~S~~HRVv~p~~~~~~~~~R~Si~~F 264 (311)
T d1dcsa_ 211 AFTDLPYRPDAVLVFCGAIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFF 264 (311)
T ss_dssp EEEECCCCTTCEEEEECHHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEE
T ss_pred ceEEEecCCCEEEEECCHHHHHHhCCEecCCCceEeCCccccCCCCCEEEEEEE
Confidence 356788889999999999777776 5553210 123579999874
No 5
>d2fcta1 b.82.2.9 (A:3-310) Syringomycin biosynthesis enzyme 2, SyrB2 {Pseudomonas syringae pv. syringae [TaxId: 321]}
Probab=70.38 E-value=1.9 Score=34.27 Aligned_cols=41 Identities=15% Similarity=0.295 Sum_probs=30.1
Q ss_pred cceEEEcCCCcEEEEccCcccccccccccc-CCCCCceEEEecccc
Q 026231 195 DQHSFTLKHGSMLVMRGYTQRDWIHSVPRR-AKAESTRINLTFRHV 239 (241)
Q Consensus 195 ~~~~l~L~~gsllvM~g~~q~~w~H~Ip~~-~~~~~~RISlTFR~~ 239 (241)
..+.+.|+.||++++++.+- |+-.+. .....+|+++++|.+
T Consensus 213 ~~v~~~lkaGdvlif~~~l~----HgS~pN~~~S~~~R~~~~~rY~ 254 (308)
T d2fcta1 213 SAVPMQMKAGQFIIFWSTLM----HASYPHSGESQEMRMGFASRYV 254 (308)
T ss_dssp GCEEECBCTTEEEEEETTSE----EEECCBCSSSSSCEEEEEEEEE
T ss_pred ceEEEeeCCCeEEEECCCcc----ccCCCCCCCCCCceEEEEEEEe
Confidence 45778999999999988764 554332 224678999999874
No 6
>d1odma_ b.82.2.1 (A:) Isopenicillin N synthase {Emericella nidulans [TaxId: 162425]}
Probab=65.99 E-value=2.6 Score=34.05 Aligned_cols=42 Identities=12% Similarity=0.106 Sum_probs=30.7
Q ss_pred ceEEEcCCCcEEEEccCccccccccccccC-----CCCCceEEEecc
Q 026231 196 QHSFTLKHGSMLVMRGYTQRDWIHSVPRRA-----KAESTRINLTFR 237 (241)
Q Consensus 196 ~~~l~L~~gsllvM~g~~q~~w~H~Ip~~~-----~~~~~RISlTFR 237 (241)
-+.++..+|+++|.-|.+-+.|..+.-+.. .....|+||.|=
T Consensus 237 W~~v~~~~~~~vVN~Gd~l~~~Tng~~kst~HRV~~~~~~R~Si~~F 283 (329)
T d1odma_ 237 YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWVNAERQSLPFF 283 (329)
T ss_dssp EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECCCSCEEEEEEE
T ss_pred ceeeccccceEEEehhhhHHHHhCCEecCCCceecCCCCCEEEEEEE
Confidence 567888999999999998888874332211 145679999874
No 7
>d1w9ya1 b.82.2.1 (A:2-308) 1-aminocyclopropane-1-carboxylate oxidase 1 {Petunia hybrida [TaxId: 4102]}
Probab=64.90 E-value=9 Score=30.37 Aligned_cols=43 Identities=12% Similarity=0.048 Sum_probs=31.6
Q ss_pred cceEEEcCCCcEEEEccCccccccccccccC------CCCCceEEEecc
Q 026231 195 DQHSFTLKHGSMLVMRGYTQRDWIHSVPRRA------KAESTRINLTFR 237 (241)
Q Consensus 195 ~~~~l~L~~gsllvM~g~~q~~w~H~Ip~~~------~~~~~RISlTFR 237 (241)
.-+.++..+|+++|.-|++-+.|..+.-+.. .....|+|+.|=
T Consensus 201 ~Wi~v~p~~~~~vVnvGD~l~~~Tng~~kSt~HRVv~~~~~~R~Si~~F 249 (307)
T d1w9ya1 201 QWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMHRVIAQKDGARMSLASF 249 (307)
T ss_dssp EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSSCCEEEEEE
T ss_pred cEEEeccCCCeEEEEcchhhHHhhCCcccCcCceeecCCCCCcEEEEEE
Confidence 4667888999999999998888765543321 145689999874
No 8
>d1gp6a_ b.82.2.1 (A:) Anthocyanidin synthase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=62.45 E-value=10 Score=30.44 Aligned_cols=43 Identities=14% Similarity=0.026 Sum_probs=30.4
Q ss_pred cceEEEcCCCcEEEEccCccccccccccccC------CCCCceEEEecc
Q 026231 195 DQHSFTLKHGSMLVMRGYTQRDWIHSVPRRA------KAESTRINLTFR 237 (241)
Q Consensus 195 ~~~~l~L~~gsllvM~g~~q~~w~H~Ip~~~------~~~~~RISlTFR 237 (241)
.-+.+.-.+|+++|.-|.+-+.|..+.-+.. .....|+||.|=
T Consensus 255 ~W~~V~p~~~a~vVNvGD~l~~~TnG~~~St~HRVv~~~~~~R~Si~~F 303 (349)
T d1gp6a_ 255 KWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVF 303 (349)
T ss_dssp EEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEE
T ss_pred ceEEccCCCCCeeeeHHhHHHHHhCCCccCcCccccCCCCCCeEEEEEE
Confidence 3567888999999999998888864332211 135679999774
No 9
>d2a1xa1 b.82.2.9 (A:43-338) Phytanoyl-CoA dioxygenase, PhyH {Human (Homo sapiens) [TaxId: 9606]}
Probab=56.60 E-value=5.7 Score=30.90 Aligned_cols=40 Identities=8% Similarity=0.198 Sum_probs=29.6
Q ss_pred cceEEEcCCCcEEEEccCccccccccccccCCCCCceEEEecccc
Q 026231 195 DQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTFRHV 239 (241)
Q Consensus 195 ~~~~l~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISlTFR~~ 239 (241)
..+.+.++.||+++|.+.+- |+-.... ....|.+|++|.+
T Consensus 202 ~~v~~~~k~Gdvli~~~~l~----Hgs~~N~-S~~~R~~l~~~y~ 241 (296)
T d2a1xa1 202 ARVHLVMEKGDTVFFHPLLI----HGSGQNK-TQGFRKAISCHFA 241 (296)
T ss_dssp CCEEECBCTTCEEEECTTCC----EEECCBC-SSSCEEEEEEEEE
T ss_pred ceEEeeecCCcEEEECCCee----ecCCCCC-CcCceEEEEEEEE
Confidence 35678899999999998764 5544332 4578999999853
No 10
>d1e5ra_ b.82.2.4 (A:) Type II Proline 3-hydroxylase (proline oxidase) {Streptomyces sp. [TaxId: 1931]}
Probab=47.61 E-value=7.5 Score=31.27 Aligned_cols=95 Identities=17% Similarity=0.120 Sum_probs=50.2
Q ss_pred CchHHHHHHHHHhhcCCCCCceeeeeeecCCCCCcccccCCCCccCCCCeEEEE----EcCCceeeEEeeCCCCCCCCch
Q 026231 108 FPPLKDILDIVLKVLPGSRFNSLLLNRYKGGNDYVGWHADDEKLYGSTPEIASV----SFGCERDFLLKIKPNRRTDDEP 183 (241)
Q Consensus 108 ~P~L~~~~~~~~e~~~g~~~n~~liN~Y~~G~d~i~~H~D~~~~~g~~~~Iasv----SLG~~r~f~fr~~~~~~~~~~~ 183 (241)
.|.+.++++.+ ........+++..- +|+ .|.+|.|..........+..| .--..+.|.+.
T Consensus 75 ~Pyl~eii~~~---~~~~~~r~~rirL~-pGg-~I~pH~D~~~~~~~~~~~~RiHIPL~Tn~~~~f~v~----------- 138 (290)
T d1e5ra_ 75 VPYLKEIVTTV---FDGTHLQMARSRNL-KNA-IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNE----------- 138 (290)
T ss_dssp SCHHHHHHHHH---BCSSSEEEEEEEEE-ESE-EEEEECCC--------CBCCEEEECSCCTTEEEEET-----------
T ss_pred ChHHHHHHHHh---cccceeeeeeeeec-CCc-EecCCcCCccccccCCceEEEEEEeecCCceEEEEC-----------
Confidence 46777776644 11223345555544 566 799999975432211111111 11122333321
Q ss_pred hhhhhhccCCccceEEEcCCCcEEEEccCccccccccccccCCCCCceEEEec
Q 026231 184 VSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTF 236 (241)
Q Consensus 184 ~~~~~~~~~~~~~~~l~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISlTF 236 (241)
...+.++.|+++.+.-. ..|.|-.. ....||.|.+
T Consensus 139 ------------~~~~~m~~Ge~w~~D~~----~~H~v~N~--sd~dRIHLVi 173 (290)
T d1e5ra_ 139 ------------DTVIHMRPGEIWFLDAA----TVHSAVNF--SEISRQSLCV 173 (290)
T ss_dssp ------------TEEECCCTTEEEECCTT----SCEEEEES--SSSCCCEEEE
T ss_pred ------------CEEEECCCCeEEEEcCC----CeEEEECC--CCCceEEEEE
Confidence 13588999999987543 46766653 6778888865
No 11
>d2b8ma1 b.82.1.18 (A:1-108) Hypothetical protein MJ0764 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=34.16 E-value=40 Score=21.98 Aligned_cols=54 Identities=11% Similarity=0.081 Sum_probs=34.0
Q ss_pred eeeeecCCCCCcccccCCCCccCCCCeEEEEEcCCceeeEEeeCCCCCCCCchhhhhhhccCCccceEEEcCCCcEEEEc
Q 026231 131 LLNRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPNRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMR 210 (241)
Q Consensus 131 liN~Y~~G~d~i~~H~D~~~~~g~~~~IasvSLG~~r~f~fr~~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~gsllvM~ 210 (241)
..-...+|+ .+.+|.-+.. ..+ +-|-+...|.+... -.+.|.+||++.+.
T Consensus 29 ~~~~l~pG~-~~p~H~H~~~-----e~~--~Vl~G~~~~~v~~~----------------------e~~~v~~Gd~i~ip 78 (108)
T d2b8ma1 29 NHIVLPRGE-QMPKHYSNSY-----VHL--IIIKGEMTLTLEDQ----------------------EPHNYKEGNIVYVP 78 (108)
T ss_dssp EEEEEETTC-BCCCEECSSC-----EEE--EEEESEEEEEETTS----------------------CCEEEETTCEEEEC
T ss_pred EEEEECCCC-cChhhccccc-----EEE--EEEeeeEEEEEecc----------------------cEEEeecceEeecc
Confidence 333567787 8999986422 123 33556677765321 12678999999998
Q ss_pred cCcc
Q 026231 211 GYTQ 214 (241)
Q Consensus 211 g~~q 214 (241)
....
T Consensus 79 ~~~~ 82 (108)
T d2b8ma1 79 FNVK 82 (108)
T ss_dssp TTCE
T ss_pred CCce
Confidence 7764
No 12
>d1vr3a1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=33.26 E-value=20 Score=26.48 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=29.3
Q ss_pred EEcCCceeeEEeeCCCCCCCCchhhhhhhccCCccceEEEcCCCcEEEEccCccccc
Q 026231 161 VSFGCERDFLLKIKPNRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDW 217 (241)
Q Consensus 161 vSLG~~r~f~fr~~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~gsllvM~g~~q~~w 217 (241)
+-+.++..|.++... +..+.|.+..|||+++.......+
T Consensus 97 ~vl~G~G~f~v~~~~------------------~~~iri~~~~GDli~iPag~~HwF 135 (179)
T d1vr3a1 97 YILEGSGYFDVRDKE------------------DKWIRISMEKGDMITLPAGIYHRF 135 (179)
T ss_dssp EEEEEEEEEEEECTT------------------SCEEEEEEETTEEEEECTTCCEEE
T ss_pred EEEeCcEEEEEECCC------------------CcEEEEEEeCCCEEEeCCCccEec
Confidence 446677899887543 247889999999999988865443
No 13
>d1v70a_ b.82.1.9 (A:) Hypothetical protein TTHA0104 {Thermus thermophilus [TaxId: 274]}
Probab=25.61 E-value=73 Score=19.86 Aligned_cols=52 Identities=10% Similarity=-0.015 Sum_probs=31.5
Q ss_pred eeecCCCCCcccccCCCCccCCCCeEEEEEcCCceeeEEeeCCCCCCCCchhhhhhhccCCccceEEEcCCCcEEEEccC
Q 026231 133 NRYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPNRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGY 212 (241)
Q Consensus 133 N~Y~~G~d~i~~H~D~~~~~g~~~~IasvSLG~~r~f~fr~~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~gsllvM~g~ 212 (241)
-.+.+|+ .+++|.-.... .+. +-+-++..+.+. ...+.|..||++.+...
T Consensus 33 ~~~~PG~-~~~~H~H~~~~-----e~~-~vl~G~~~~~~~-----------------------~~~~~l~~Gd~~~~p~~ 82 (105)
T d1v70a_ 33 YALLPGQ-AQKVHVHEGSD-----KVY-YALEGEVVVRVG-----------------------EEEALLAPGMAAFAPAG 82 (105)
T ss_dssp EEECTTC-EEEEECCSSCE-----EEE-EEEESCEEEEET-----------------------TEEEEECTTCEEEECTT
T ss_pred EEECCCC-CCcceECCCCe-----EEE-EEEeeEEEEEEe-----------------------eeEEEecceEEEEeCCC
Confidence 3467887 89998643221 122 234445555542 12478999999999776
Q ss_pred cc
Q 026231 213 TQ 214 (241)
Q Consensus 213 ~q 214 (241)
..
T Consensus 83 ~~ 84 (105)
T d1v70a_ 83 AP 84 (105)
T ss_dssp SC
T ss_pred CE
Confidence 53
No 14
>d3nula_ d.110.1.1 (A:) Profilin (actin-binding protein) {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=24.42 E-value=59 Score=22.19 Aligned_cols=51 Identities=8% Similarity=-0.011 Sum_probs=34.3
Q ss_pred eEEeCCCCceEEEeCCC--CCHHHHHHHHHHHHhcCCCCCceeeecCeEEeecc
Q 026231 29 MVVDLGNGSEVIYFPRI--IKMEDSWKFFDYLNNRIPWNRPTIRVFGRSCLQPR 80 (241)
Q Consensus 29 ~~~~l~~~~~~~~~~~f--l~~~ea~~L~~~l~~~~~w~~~~~~~~G~~~~~pR 80 (241)
-++.+ +|+-----++| |+++|...|...+.+........+.+-|.++..-|
T Consensus 23 AI~g~-DGsvWA~S~gf~~l~~~E~~~i~~~f~~~~~~~~~Gi~~~G~KY~~lr 75 (130)
T d3nula_ 23 AILGQ-DGSVWAQSAKFPQLKPQEIDGIKKDFEEPGFLAPTGLFLGGEKYMVIQ 75 (130)
T ss_dssp EEEET-TSCEEEECTTCCCCCHHHHHHHHHHHHSTTSSTTTCEEETTEEEEEEE
T ss_pred EEEcC-CCCeeeeCCCCCCCCHHHHHHHHHHhcCccccccCCeEECCeEEEEEe
Confidence 34555 34322223788 78999998988876656666667888888876554
No 15
>d1h2ka_ b.82.2.6 (A:) Hypoxia-inducible factor HIF ihhibitor (FIH1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.95 E-value=25 Score=27.90 Aligned_cols=37 Identities=19% Similarity=0.348 Sum_probs=25.2
Q ss_pred cceEEEcCCCcEEEEccCccccccccccccCCCCCceEEEec
Q 026231 195 DQHSFTLKHGSMLVMRGYTQRDWIHSVPRRAKAESTRINLTF 236 (241)
Q Consensus 195 ~~~~l~L~~gsllvM~g~~q~~w~H~Ip~~~~~~~~RISlTF 236 (241)
..+.+.|++||+|.+... |-|.|.... ..+.-||++|
T Consensus 245 ~~~~~~l~pGd~L~iP~~----w~H~V~~~~-~~~~sisvn~ 281 (335)
T d1h2ka_ 245 VGYETVVGPGDVLYIPMY----WWHHIESLL-NGGITITVNF 281 (335)
T ss_dssp CEEEEEECTTCEEEECTT----CEEEEEECT-TSCCEEEEEE
T ss_pred CceEEEECCCCEEeeCCC----CeEEEEEcC-CCCeEEEEEe
Confidence 457789999999999765 778876521 1233466654
No 16
>d1zrra1 b.82.1.6 (A:1-179) Acireductone dioxygenase {Klebsiella pneumoniae [TaxId: 573]}
Probab=22.94 E-value=42 Score=24.64 Aligned_cols=36 Identities=11% Similarity=0.072 Sum_probs=27.0
Q ss_pred cCCceeeEEeeCCCCCCCCchhhhhhhccCCccceEEEcCCCcEEEEccCccccc
Q 026231 163 FGCERDFLLKIKPNRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYTQRDW 217 (241)
Q Consensus 163 LG~~r~f~fr~~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~gsllvM~g~~q~~w 217 (241)
+.++..|.++.. +..+.+.++.||+++....+...+
T Consensus 107 v~G~g~f~v~~~-------------------d~~~~v~~~~GDli~vPag~~H~F 142 (179)
T d1zrra1 107 VEGAGLFCLHIG-------------------DEVFQVLCEKNDLISVPAHTPHWF 142 (179)
T ss_dssp EESCCCCCEECS-------------------SCEEEEECCCSCEEEECTTCCBCC
T ss_pred EeCeEEEEEEcC-------------------CeEEEEEEcCCCEEEeCCCCeEcc
Confidence 456678888742 236789999999999988876554
No 17
>d1yhfa1 b.82.1.9 (A:1-112) Hypothetical protein SPy1581 {Streptococcus pyogenes [TaxId: 1314]}
Probab=21.03 E-value=50 Score=21.44 Aligned_cols=51 Identities=14% Similarity=0.291 Sum_probs=33.2
Q ss_pred eecCCCCCcccccCCCCccCCCCeEEEEEcCCceeeEEeeCCCCCCCCchhhhhhhccCCccceEEEcCCCcEEEEccCc
Q 026231 134 RYKGGNDYVGWHADDEKLYGSTPEIASVSFGCERDFLLKIKPNRRTDDEPVSKRLKKKGNLDQHSFTLKHGSMLVMRGYT 213 (241)
Q Consensus 134 ~Y~~G~d~i~~H~D~~~~~g~~~~IasvSLG~~r~f~fr~~~~~~~~~~~~~~~~~~~~~~~~~~l~L~~gsllvM~g~~ 213 (241)
.+.+|. .+++|.-... ..+ +-|-+...|.+. .....|..||++++....
T Consensus 43 ~~~~G~-~~~~H~h~~~-----~~~--~vl~G~~~~~~~-----------------------~~~~~l~~Gd~~~ip~~~ 91 (112)
T d1yhfa1 43 SLDKGQ-EIGRHSSPGD-----AMV--TILSGLAEITID-----------------------QETYRVAEGQTIVMPAGI 91 (112)
T ss_dssp EECTTC-EEEEECCSSE-----EEE--EEEESEEEEEET-----------------------TEEEEEETTCEEEECTTS
T ss_pred EECCCC-CcceEECCCC-----EEE--EEEeCEEEEEEc-----------------------cEEEEecCCEEEEcCCCC
Confidence 467888 8999975321 123 334455666652 124789999999998776
Q ss_pred cc
Q 026231 214 QR 215 (241)
Q Consensus 214 q~ 215 (241)
.+
T Consensus 92 ~H 93 (112)
T d1yhfa1 92 PH 93 (112)
T ss_dssp CE
T ss_pred eE
Confidence 43
No 18
>d2arca_ b.82.4.1 (A:) Regulatory protein AraC {Escherichia coli [TaxId: 562]}
Probab=20.27 E-value=54 Score=22.44 Aligned_cols=20 Identities=15% Similarity=0.350 Sum_probs=16.7
Q ss_pred EEEcCCCcEEEEccCccccc
Q 026231 198 SFTLKHGSMLVMRGYTQRDW 217 (241)
Q Consensus 198 ~l~L~~gsllvM~g~~q~~w 217 (241)
.+.+++||++++....-+.|
T Consensus 57 ~y~l~~Gdl~li~P~~~H~y 76 (161)
T d2arca_ 57 EFVCRPGDILLFPPGEIHHY 76 (161)
T ss_dssp EEEECTTCEEEECTTCCEEE
T ss_pred EEEecCCeEEEEcCCCcEEE
Confidence 58999999999998876554
Done!