BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026232
(241 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255562637|ref|XP_002522324.1| 50S ribosomal protein L25, putative [Ricinus communis]
gi|223538402|gb|EEF40008.1| 50S ribosomal protein L25, putative [Ricinus communis]
Length = 253
Score = 358 bits (920), Expect = 9e-97, Method: Compositional matrix adjust.
Identities = 174/235 (74%), Positives = 200/235 (85%)
Query: 1 MTLWCRTVQKVAHNSRTPFSRTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDL 60
M W R ++ V +S + +S+YHTIQAIPRECTGSRV+ARDR+QGRIPAVVF+Q L
Sbjct: 1 MAKWLRGLKTVVQSSSPSLNSQSSFYHTIQAIPRECTGSRVAARDRAQGRIPAVVFSQSL 60
Query: 61 LDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVL 120
LDKN + RS SRKQ+L+TERKQI SIL SVELPFFCSTTF LQIRAGSGSSVL++SG +L
Sbjct: 61 LDKNPNSRSISRKQLLTTERKQIQSILTSVELPFFCSTTFNLQIRAGSGSSVLIESGTIL 120
Query: 121 PIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYL 180
PIKVHRDEETG+ILNLVFVWADDGTELKVDVP++FKG E CPGLKKGG L IR SLK L
Sbjct: 121 PIKVHRDEETGKILNLVFVWADDGTELKVDVPLIFKGEEDCPGLKKGGKLNRIRKSLKVL 180
Query: 181 CPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLEN 235
CPAEHI PK+EVDVS+LDIGD+V M D+EVHPS KLLSKNE +P+CKI +T LE+
Sbjct: 181 CPAEHIPPKLEVDVSSLDIGDKVSMGDVEVHPSLKLLSKNENIPICKIVSTDLES 235
>gi|224096802|ref|XP_002310742.1| predicted protein [Populus trichocarpa]
gi|222853645|gb|EEE91192.1| predicted protein [Populus trichocarpa]
Length = 261
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 165/219 (75%), Positives = 191/219 (87%)
Query: 23 TSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQ 82
+S YHTIQAIPRE GSRVSAR+R QGRIPAVVF+Q LLD N R SRK++L+TE+KQ
Sbjct: 27 SSRYHTIQAIPREVVGSRVSAREREQGRIPAVVFSQSLLDINPSNRYTSRKRLLTTEKKQ 86
Query: 83 IHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD 142
I +ILKSVE+PFFCSTTFPLQIRAG+GSSVLL+SG VLPIK+HRDE+TG+ILNLVF WAD
Sbjct: 87 ILAILKSVEIPFFCSTTFPLQIRAGTGSSVLLESGTVLPIKIHRDEKTGKILNLVFAWAD 146
Query: 143 DGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDR 202
+GTE+KVDVPVVFKG E+CPGLKKGG+LK +R++LKYLCPAEHI KIEVD+SNLDI D
Sbjct: 147 EGTEMKVDVPVVFKGEENCPGLKKGGHLKMMRSTLKYLCPAEHIPQKIEVDISNLDIEDG 206
Query: 203 VFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPEPAVM 241
+FM DIEVH S KLLSKNE MP+CKI AT L+ PEPA +
Sbjct: 207 LFMRDIEVHSSLKLLSKNENMPVCKIVATNLDTPEPAAL 245
>gi|449461415|ref|XP_004148437.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
gi|449515688|ref|XP_004164880.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
Length = 258
Score = 346 bits (887), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 160/217 (73%), Positives = 189/217 (87%)
Query: 18 PFSRTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILS 77
PFS + YHTIQAIPREC+G ++S++DR+QGRIPAVVF+Q +L+KN+ SPSRK +L+
Sbjct: 26 PFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLT 85
Query: 78 TERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLV 137
TERKQIHSILKSVELPFFCST F LQIRAGSGSSVLL+SG +LPIK+HR+EETG+I N+V
Sbjct: 86 TERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSVLLESGSILPIKIHRNEETGKIFNIV 145
Query: 138 FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
FVWAD+G+ELKVDVP+VFKG E+CPGL+KGG L IRTSLKYLCPAEHI KIEVDVSNL
Sbjct: 146 FVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNL 205
Query: 198 DIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLE 234
DIGDR+F+ D++VH S KLLSKNE MP+CKI K E
Sbjct: 206 DIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIKSE 242
>gi|359497479|ref|XP_003635532.1| PREDICTED: 50S ribosomal protein L25-like [Vitis vinifera]
Length = 251
Score = 333 bits (853), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 162/216 (75%), Positives = 183/216 (84%), Gaps = 1/216 (0%)
Query: 23 TSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLL-DKNTDRRSPSRKQILSTERK 81
+ YHTIQAI RE TGS+VSARDR+QGRIPAVVFAQ LL N + RS SRK++L+TERK
Sbjct: 30 AAAYHTIQAISREFTGSKVSARDRAQGRIPAVVFAQQLLTGGNMNGRSVSRKRLLTTERK 89
Query: 82 QIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWA 141
QI +ILKSVE F CSTTFPLQIRAGSGSSVLL+SG VLP+K+HRDE TG++LNLVF WA
Sbjct: 90 QIQAILKSVEPEFICSTTFPLQIRAGSGSSVLLESGTVLPLKIHRDEATGKVLNLVFAWA 149
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
D+G+ELKVDVP+VFKG + CPGLKKGGYL IR SLK+LCPAEHI KIEVDVSNLDIGD
Sbjct: 150 DEGSELKVDVPLVFKGEDVCPGLKKGGYLNRIRPSLKFLCPAEHIPSKIEVDVSNLDIGD 209
Query: 202 RVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPE 237
R+ M D+EVHPS KLLSKNE MP+CKI A KLE E
Sbjct: 210 RILMHDVEVHPSLKLLSKNETMPVCKIVAAKLERAE 245
>gi|359480435|ref|XP_002263685.2| PREDICTED: 50S ribosomal protein L25 [Vitis vinifera]
gi|302144151|emb|CBI23278.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 332 bits (852), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 162/216 (75%), Positives = 183/216 (84%), Gaps = 1/216 (0%)
Query: 23 TSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLL-DKNTDRRSPSRKQILSTERK 81
+ YHTIQAI RE TGS+VSARDR+QGRIPAVVFAQ LL N + RS SRK++L+TERK
Sbjct: 30 AAAYHTIQAISREFTGSKVSARDRAQGRIPAVVFAQQLLTGGNINGRSVSRKRLLTTERK 89
Query: 82 QIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWA 141
QI +ILKSVE F CSTTFPLQIRAGSGSSVLL+SG VLP+K+HRDE TG++LNLVF WA
Sbjct: 90 QIQAILKSVEPEFICSTTFPLQIRAGSGSSVLLESGTVLPLKIHRDEATGKVLNLVFAWA 149
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
D+G+ELKVDVP+VFKG + CPGLKKGGYL IR SLK+LCPAEHI KIEVDVSNLDIGD
Sbjct: 150 DEGSELKVDVPLVFKGEDVCPGLKKGGYLNRIRPSLKFLCPAEHIPSKIEVDVSNLDIGD 209
Query: 202 RVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPE 237
R+ M D+EVHPS KLLSKNE MP+CKI A KLE E
Sbjct: 210 RILMHDVEVHPSLKLLSKNETMPVCKIVAAKLERAE 245
>gi|356511738|ref|XP_003524580.1| PREDICTED: 50S ribosomal protein L25-like [Glycine max]
Length = 246
Score = 329 bits (843), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 162/233 (69%), Positives = 190/233 (81%), Gaps = 3/233 (1%)
Query: 6 RTVQKVAHNSRTPFSRTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNT 65
RTV S + F R+T YHTIQAIPREC+GS+VSARDR+QGRIP VVF Q+LL+KN
Sbjct: 14 RTVA-AGRGSLSGFQRST--YHTIQAIPRECSGSKVSARDRTQGRIPCVVFLQNLLEKNP 70
Query: 66 DRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVH 125
D RS S+K +L+ E+KQI +IL S + PFFCST FPLQIRAGSGSS LL+SG VLPIK+H
Sbjct: 71 DARSESKKHLLTVEKKQIKAILDSADAPFFCSTRFPLQIRAGSGSSHLLESGTVLPIKIH 130
Query: 126 RDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEH 185
RDEE+G+ILNLVFVWA+DG +LKVDVPVVF+G ++CPG++KGG L IR SLK+LCP+EH
Sbjct: 131 RDEESGKILNLVFVWAEDGMKLKVDVPVVFEGEDACPGVQKGGILNKIRPSLKFLCPSEH 190
Query: 186 ISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPEP 238
I KI VDVSNLDI DR+FM DIEVHPS KLLSKNE MP+CKI T L N EP
Sbjct: 191 IPSKIVVDVSNLDIEDRIFMRDIEVHPSLKLLSKNESMPICKIVPTSLGNKEP 243
>gi|357518581|ref|XP_003629579.1| 50S ribosomal protein L25 [Medicago truncatula]
gi|355523601|gb|AET04055.1| 50S ribosomal protein L25 [Medicago truncatula]
Length = 255
Score = 325 bits (834), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 154/214 (71%), Positives = 180/214 (84%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
++YHTIQAIPRE TGSRV+ARDR QGRIPAVVF QDLL+K+ + RS SRKQ+L+ E++QI
Sbjct: 28 NHYHTIQAIPREITGSRVAARDRKQGRIPAVVFFQDLLEKSPEARSTSRKQLLTVEKRQI 87
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
++L S+E PFFCST FPLQIRAGSGS+ LL+SG VLPIK+HRDEE+G ILNLVFVWA+D
Sbjct: 88 KAVLNSIEAPFFCSTRFPLQIRAGSGSTHLLESGTVLPIKIHRDEESGNILNLVFVWAED 147
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G LKVDVPVV KG + CPGLKKGG+L IRTSL+YL P+EHI KIEVD+SNLDI DR+
Sbjct: 148 GMNLKVDVPVVIKGEDVCPGLKKGGFLNKIRTSLRYLGPSEHIPSKIEVDISNLDIEDRI 207
Query: 204 FMSDIEVHPSWKLLSKNEKMPLCKISATKLENPE 237
FM DIEVHPS KLL+KNE MP+CKI T L E
Sbjct: 208 FMRDIEVHPSLKLLNKNENMPICKIVPTSLGKQE 241
>gi|15240108|ref|NP_201487.1| Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding
domain protein [Arabidopsis thaliana]
gi|9758136|dbj|BAB08628.1| unnamed protein product [Arabidopsis thaliana]
gi|15450930|gb|AAK96736.1| Unknown protein [Arabidopsis thaliana]
gi|17978763|gb|AAL47375.1| unknown protein [Arabidopsis thaliana]
gi|332010889|gb|AED98272.1| Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding
domain protein [Arabidopsis thaliana]
Length = 249
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 157/245 (64%), Positives = 187/245 (76%), Gaps = 8/245 (3%)
Query: 1 MTLWCRTVQKV-AHNSRTPFS------RTTSYYHTIQAIPRECTGSRVSARDRSQGRIPA 53
M W R ++ V A + P S R Y TIQAIPRE TG VSARDR+ GRIPA
Sbjct: 1 MAKWWRGLRSVTAEVADLPASSFGRSIRCIHQYQTIQAIPREATGRGVSARDRTIGRIPA 60
Query: 54 VVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVL 113
VVF Q LLD + +R SRKQ+L+ ++KQI SI+ SV LPFFCSTTF LQIRAG GSS L
Sbjct: 61 VVFPQSLLDTDASKRGVSRKQLLTADKKQIKSIIDSVGLPFFCSTTFQLQIRAGQGSSTL 120
Query: 114 LDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSI 173
++SG+VLP+KVHRDEETG+ILNLVFVWADDG +LKVDVPVVFKG++ CPGL+KGG L++I
Sbjct: 121 VESGRVLPLKVHRDEETGKILNLVFVWADDGEKLKVDVPVVFKGLDHCPGLQKGGNLRTI 180
Query: 174 RTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATK- 232
R++LK L PAEHI KIEVDVSNLDI D+V + D+ HPS KLLSKNE MP+CKI AT
Sbjct: 181 RSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQDVVFHPSLKLLSKNETMPVCKIVATSP 240
Query: 233 LENPE 237
++ PE
Sbjct: 241 VKEPE 245
>gi|297794323|ref|XP_002865046.1| hypothetical protein ARALYDRAFT_920032 [Arabidopsis lyrata subsp.
lyrata]
gi|297310881|gb|EFH41305.1| hypothetical protein ARALYDRAFT_920032 [Arabidopsis lyrata subsp.
lyrata]
Length = 245
Score = 306 bits (783), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 153/241 (63%), Positives = 184/241 (76%), Gaps = 4/241 (1%)
Query: 1 MTLWCRTVQKVAHNSRTPFS---RTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFA 57
M W R ++ VA+ + F R Y TIQAIPRE TG VSARDR+ GRIPAVVF
Sbjct: 1 MAKWWRGLRSVANLPASSFGGSIRRIHQYQTIQAIPREATGRGVSARDRTIGRIPAVVFP 60
Query: 58 QDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSG 117
Q LL+ + +R SRKQ+L+ + KQI SI+ SV LPFFCSTTF LQIRAG GSS L++SG
Sbjct: 61 QSLLETDASKRGVSRKQLLTADNKQIKSIIDSVGLPFFCSTTFQLQIRAGQGSSTLVESG 120
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+VLP+K+HRDEE G+ILNLVFVWADDG +LKVDVPVVF G+++CPGLKKGG L+SIR++L
Sbjct: 121 RVLPLKIHRDEENGKILNLVFVWADDGEKLKVDVPVVFNGLDNCPGLKKGGNLRSIRSTL 180
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATK-LENP 236
K L PAEHI KIEVDVS LDI D+V + D+ HPS KLLSKNE MP+CKI AT ++ P
Sbjct: 181 KLLGPAEHIPSKIEVDVSELDIEDKVLLQDVVFHPSLKLLSKNETMPVCKIVATSPVKEP 240
Query: 237 E 237
E
Sbjct: 241 E 241
>gi|388505558|gb|AFK40845.1| unknown [Lotus japonicus]
Length = 195
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 131/191 (68%), Positives = 155/191 (81%)
Query: 48 QGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAG 107
QGRIPA VF QDLL K+ RS ++K +L+ E+KQI +IL SV+ FFCST FPLQIRAG
Sbjct: 2 QGRIPAAVFLQDLLSKDAGNRSAAKKHLLTVEKKQIKAILNSVQTSFFCSTRFPLQIRAG 61
Query: 108 SGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKG 167
SGSS L++SG VLP+K+H D+E+G+ILNLVFVWA+ G LKVDVPVVFKG + CPGL+KG
Sbjct: 62 SGSSHLVESGTVLPVKIHMDQESGQILNLVFVWAEGGMNLKVDVPVVFKGEDVCPGLQKG 121
Query: 168 GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCK 227
G+L IRTSLK+LCP+EHI KIEVDVSNLDI DR+FM DIEVHPS KLLSKNE MP+CK
Sbjct: 122 GFLNKIRTSLKFLCPSEHIPSKIEVDVSNLDIEDRIFMRDIEVHPSLKLLSKNENMPICK 181
Query: 228 ISATKLENPEP 238
+ T L N P
Sbjct: 182 VVPTSLGNQAP 192
>gi|296085755|emb|CBI29566.3| unnamed protein product [Vitis vinifera]
Length = 179
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 130/170 (76%), Positives = 147/170 (86%)
Query: 68 RSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRD 127
RS SRK++L+TERKQI +ILKSVE F CSTTFPLQIRAGSGSSVLL+SG VLP+K+HRD
Sbjct: 4 RSVSRKRLLTTERKQIQAILKSVEPEFICSTTFPLQIRAGSGSSVLLESGTVLPLKIHRD 63
Query: 128 EETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHIS 187
E TG++LNLVF WAD+G+ELKVDVP+VFKG + CPGLKKGGYL IR SLK+LCPAEHI
Sbjct: 64 EATGKVLNLVFAWADEGSELKVDVPLVFKGEDVCPGLKKGGYLNRIRPSLKFLCPAEHIP 123
Query: 188 PKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPE 237
KIEVDVSNLDIGDR+ M D+EVHPS KLLSKNE MP+CKI A KLE E
Sbjct: 124 SKIEVDVSNLDIGDRILMHDVEVHPSLKLLSKNETMPVCKIVAAKLERAE 173
>gi|413933669|gb|AFW68220.1| 5S rRNA binding protein [Zea mays]
Length = 239
Score = 258 bits (660), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 162/221 (73%), Gaps = 7/221 (3%)
Query: 14 NSRTPFSRTTS--YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPS 71
+S P+ RT S Y+HTIQA+PRE G R +AR+R GR+PAV+ L +
Sbjct: 21 SSPAPWRRTASASYHHTIQAVPRETAGPRAAARERRHGRVPAVLLT---LAGAAPGNGIA 77
Query: 72 RKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETG 131
+ +L+ +R+Q+ +LK + P+F ST LQ+RAG S+ +L +G VLPIKVHRDE +G
Sbjct: 78 HRHLLTADRRQLAEMLK--QSPYFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDENSG 135
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIE 191
ILNLV V AD+GT LKVD+PV FKG ++CPGLKKGG+L+ IRTSL YLCPAEHI PKIE
Sbjct: 136 NILNLVMVKADEGTMLKVDLPVEFKGKDACPGLKKGGFLQKIRTSLVYLCPAEHIPPKIE 195
Query: 192 VDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATK 232
VD++NLD+GDRV M DI VHPS KLLSKNE MP+CKI A+K
Sbjct: 196 VDLTNLDVGDRVLMHDIPVHPSLKLLSKNETMPVCKILASK 236
>gi|218193303|gb|EEC75730.1| hypothetical protein OsI_12602 [Oryza sativa Indica Group]
Length = 239
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 131/220 (59%), Positives = 163/220 (74%), Gaps = 7/220 (3%)
Query: 15 SRTPFSR--TTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSR 72
S P+ R + SY+HTIQA+PRE G R +AR+R GR+PAV+ A L +
Sbjct: 22 STAPWRRAASASYHHTIQALPRETAGPRAAARERRSGRVPAVLLA---LAGAGPGEGVAH 78
Query: 73 KQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGR 132
+++L+ +RKQ+ ILK + P+F ST LQ+RAG S+ ++ SG VLPIKVHRDE TG
Sbjct: 79 RKLLTADRKQLGEILK--QSPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGN 136
Query: 133 ILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEV 192
ILNLV V AD+GT LKV++PV FKG + CPGLKKGG+L+ IRTSL YLCPAEHI PKIEV
Sbjct: 137 ILNLVLVEADEGTMLKVNLPVEFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEV 196
Query: 193 DVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATK 232
D++NLDIGDRV M+DI VHPS KLLSKNE MP+CKI A+K
Sbjct: 197 DLANLDIGDRVSMNDIPVHPSLKLLSKNETMPVCKILASK 236
>gi|226528050|ref|NP_001150286.1| LOC100283916 [Zea mays]
gi|195638102|gb|ACG38519.1| 5S rRNA binding protein [Zea mays]
Length = 240
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/221 (57%), Positives = 162/221 (73%), Gaps = 7/221 (3%)
Query: 14 NSRTPFSRTTS--YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPS 71
+S P+ RT S Y+HTIQA+PRE G R +AR+R GR+PAV+ L +
Sbjct: 22 SSPAPWRRTASASYHHTIQAVPRETAGPRAAARERRHGRVPAVLLT---LAGAAPGNGIA 78
Query: 72 RKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETG 131
+ +L+ +R+Q+ +LK + P+F ST LQ+RAG S+ +L +G VLPIKVHRDE +G
Sbjct: 79 HRHLLTADRRQLAEMLK--QSPYFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDENSG 136
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIE 191
ILNLV V AD+GT LKVD+PV FKG ++CPGLKKGG+L+ IRTSL YLCPAEHI PKIE
Sbjct: 137 NILNLVMVKADEGTMLKVDLPVEFKGEDACPGLKKGGFLQKIRTSLVYLCPAEHIPPKIE 196
Query: 192 VDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATK 232
VD++NLD+GDRV M DI VHPS KLLSKNE MP+CKI A+K
Sbjct: 197 VDLTNLDVGDRVLMHDIPVHPSLKLLSKNETMPVCKILASK 237
>gi|242033675|ref|XP_002464232.1| hypothetical protein SORBIDRAFT_01g014640 [Sorghum bicolor]
gi|241918086|gb|EER91230.1| hypothetical protein SORBIDRAFT_01g014640 [Sorghum bicolor]
Length = 240
Score = 258 bits (659), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/217 (58%), Positives = 161/217 (74%), Gaps = 7/217 (3%)
Query: 18 PFSRTTS--YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQI 75
P+ RT S Y+HTIQA+PRE G R +AR+R GR+PAV+ L + +Q+
Sbjct: 23 PWRRTASASYHHTIQAVPRETAGPRAAARERRHGRVPAVLLT---LAGAAPGNGIAHRQL 79
Query: 76 LSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILN 135
L+ +R+Q+ +LK + P+F ST LQ+RAG S+ ++ +G VLPIKVHRDE +G ILN
Sbjct: 80 LTADRRQLAEMLK--QSPYFLSTPVRLQVRAGERSNAIVHAGTVLPIKVHRDETSGNILN 137
Query: 136 LVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVS 195
LV V AD+GT LKVD+PV FKG ++CPGLKKGG+L+ IRTSL YLCPAEHI PKIEVD++
Sbjct: 138 LVMVKADEGTMLKVDLPVEFKGEDTCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLT 197
Query: 196 NLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATK 232
NLD+GDRV M DI VHPS KLLSKNE MP+CKI A+K
Sbjct: 198 NLDVGDRVLMHDIPVHPSLKLLSKNETMPICKILASK 234
>gi|108709804|gb|ABF97599.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing
protein, expressed [Oryza sativa Japonica Group]
Length = 239
Score = 257 bits (657), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 130/220 (59%), Positives = 163/220 (74%), Gaps = 7/220 (3%)
Query: 15 SRTPFSR--TTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSR 72
S P+ R + SY+HTIQA+PRE G R +AR+R GR+PAV+ A L +
Sbjct: 22 STAPWRRAASASYHHTIQALPRETAGPRAAARERRSGRVPAVLLA---LAGAGPGEGVAH 78
Query: 73 KQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGR 132
+++L+ +RKQ+ ILK + P+F ST LQ+RAG S+ ++ SG VLPIKVHRDE TG
Sbjct: 79 RKLLTADRKQLGEILK--QSPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGN 136
Query: 133 ILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEV 192
ILNLV V AD+GT LKV++PV FKG + CPGLKKGG+L+ IRTSL YLCPAEHI PKIEV
Sbjct: 137 ILNLVLVEADEGTMLKVNLPVEFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEV 196
Query: 193 DVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATK 232
D++NLDIGDRV M+DI VHPS +LLSKNE MP+CKI A+K
Sbjct: 197 DLANLDIGDRVSMNDIPVHPSLRLLSKNETMPVCKILASK 236
>gi|357121142|ref|XP_003562280.1| PREDICTED: 50S ribosomal protein L25-like [Brachypodium distachyon]
Length = 237
Score = 255 bits (652), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 124/211 (58%), Positives = 159/211 (75%), Gaps = 5/211 (2%)
Query: 22 TTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERK 81
+ SY+HTIQA+PRE TG R +AR+R G +PAV+ L + +++L+T+RK
Sbjct: 29 SASYHHTIQAVPRETTGPRAAARERRNGHVPAVLLT---LAGAGPGEGVAHRKLLTTDRK 85
Query: 82 QIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWA 141
Q+ +LK + P+F ST LQ+RAG S+ ++ SG VLPIKVH DE TG ILNLV V A
Sbjct: 86 QLSEMLK--QSPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHTDESTGNILNLVMVQA 143
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
D+GT +KV++PVVFKG + CPGLKKGG+L+ IRTSL YLCPAEHI PKIEVD++NLDIGD
Sbjct: 144 DEGTMIKVNLPVVFKGEDVCPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNLDIGD 203
Query: 202 RVFMSDIEVHPSWKLLSKNEKMPLCKISATK 232
RV M+DI VHPS KLLS+NE MP+CK+ A+K
Sbjct: 204 RVLMNDIPVHPSLKLLSRNETMPVCKLLASK 234
>gi|356565643|ref|XP_003551048.1| PREDICTED: 50S ribosomal protein L25-like [Glycine max]
Length = 244
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 114/171 (66%), Positives = 135/171 (78%), Gaps = 1/171 (0%)
Query: 69 SPSRKQILSTERKQIHSI-LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRD 127
SP+ I++ R + + L S + PFFCST FPLQIRAGSGSS L +SG VLPIK+HRD
Sbjct: 71 SPAMFLIIARPRPEPKTPNLNSADAPFFCSTRFPLQIRAGSGSSHLPESGTVLPIKIHRD 130
Query: 128 EETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHIS 187
EE+G+ILNLVFVWA+DG +LKVDVPVVFKG ++CPG++KGG L IR SL++LCP+EHI
Sbjct: 131 EESGKILNLVFVWAEDGMKLKVDVPVVFKGEDACPGVQKGGILNKIRPSLRFLCPSEHIP 190
Query: 188 PKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPEP 238
I VDVSNLDI DR+FM DIEVHPS KLLSKNE MP+CKI T L N EP
Sbjct: 191 SNIAVDVSNLDIEDRIFMRDIEVHPSLKLLSKNENMPVCKIVPTSLGNKEP 241
>gi|223949451|gb|ACN28809.1| unknown [Zea mays]
Length = 148
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 98/140 (70%), Positives = 115/140 (82%)
Query: 93 PFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVP 152
P+F ST LQ+RAG S+ +L +G VLPIKVHRDE +G ILNLV V AD+GT LKVD+P
Sbjct: 6 PYFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDENSGNILNLVMVKADEGTMLKVDLP 65
Query: 153 VVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
V FKG ++CPGLKKGG+L+ IRTSL YLCPAEHI PKIEVD++NLD+GDRV M DI VHP
Sbjct: 66 VEFKGKDACPGLKKGGFLQKIRTSLVYLCPAEHIPPKIEVDLTNLDVGDRVLMHDIPVHP 125
Query: 213 SWKLLSKNEKMPLCKISATK 232
S KLLSKNE MP+CKI A+K
Sbjct: 126 SLKLLSKNETMPVCKILASK 145
>gi|116792350|gb|ABK26327.1| unknown [Picea sitchensis]
Length = 249
Score = 200 bits (509), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 145/215 (67%), Gaps = 5/215 (2%)
Query: 19 FSRTT-SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILS 77
+SR T + IQAIPRE TG ++++R G +P+VVF Q+ + RK++LS
Sbjct: 30 YSRVTEAEAEVIQAIPRERTGRFFASKERKSGLVPSVVFEQE----ENGLAAVRRKRLLS 85
Query: 78 TERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLV 137
E QI ++ V FF S TF L++ AG SS +L+ G+V+P KVH T ILN+V
Sbjct: 86 VESDQIRGLVNKVGHQFFLSRTFELEVVAGPRSSHILEKGRVVPRKVHLRPGTEEILNVV 145
Query: 138 FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
FVWA +LKVDVP+VFKG + CPGL+KGGYL +I+ ++ YLCPA+ I P I++D+SNL
Sbjct: 146 FVWAPKCAKLKVDVPLVFKGEDVCPGLRKGGYLNTIKKTIGYLCPADLIPPYIDIDLSNL 205
Query: 198 DIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATK 232
DIG+++ + DI VHPS KLLS ++ +P+CK+ T+
Sbjct: 206 DIGEKLHVRDINVHPSLKLLSGDDSLPICKMMGTR 240
>gi|449437765|ref|XP_004136661.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
gi|449494761|ref|XP_004159639.1| PREDICTED: 50S ribosomal protein L25-like [Cucumis sativus]
Length = 260
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 136/213 (63%), Gaps = 7/213 (3%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
Y TI AIPR +G +SA++R GR+P++VF Q+ D + K+++S QI
Sbjct: 51 YAETILAIPRSISGKSISAKERKAGRVPSIVFEQE------DGQHGGNKRLISVRTNQIV 104
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
++K++ FF S F L++ + S +++ +VLP K+H T LN+ F+ A
Sbjct: 105 KLVKNLGRSFFLSRLFDLEVLSDFESGDIVEKVRVLPRKIHLHAGTDAPLNVTFIRAPSH 164
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
LKVDVP+VF+G + CPGL+KG YL +I+ ++KYLCPA+ I P I+VD+S LD+G ++
Sbjct: 165 AVLKVDVPLVFRGEDVCPGLRKGSYLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLV 224
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISATKLENPE 237
M D++VHP+ KL+ K++ P+CKI+ ++ + +
Sbjct: 225 MGDLKVHPALKLV-KSKDEPVCKIAGARVSDQQ 256
>gi|225426106|ref|XP_002272347.1| PREDICTED: 50S ribosomal protein L25 [Vitis vinifera]
gi|297742259|emb|CBI34408.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 134/212 (63%), Gaps = 9/212 (4%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
+ I+AIPR +G +SA++R GR+P++VF Q+ D + K+++S + QI
Sbjct: 50 FAEIIRAIPRTISGKNISAKERKVGRVPSIVFEQE------DGQHGGNKRLISVKTNQIR 103
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
++ + FF S F L++ S+ +++ +VLP K+H T +LN+ F+ A
Sbjct: 104 KLVNHLGRSFFLSRLFDLEVGPHFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSH 163
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
LKVDVP+VF+G + PGLKKG YL +I+ ++KYLCPA+ I P I+VD+S LD G ++
Sbjct: 164 ALLKVDVPLVFRGEDVSPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIV 223
Query: 205 MSDIEVHPSWKLL-SKNEKMPLCKISATKLEN 235
M D++VHP+ KLL SK+E P+CKI T++ +
Sbjct: 224 MGDLKVHPALKLLRSKDE--PVCKIMGTRVSD 253
>gi|359476745|ref|XP_002276349.2| PREDICTED: 50S ribosomal protein L25-like [Vitis vinifera]
gi|297735240|emb|CBI17602.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/212 (40%), Positives = 133/212 (62%), Gaps = 9/212 (4%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
+ I+AIPR +G +SA++R GR+P++VF Q+ D + K+++S QI
Sbjct: 50 FAEIIRAIPRTISGKNISAKERKVGRVPSIVFEQE------DGQHGGNKRLISVRTNQIR 103
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
++ + FF S F L++ S+ +++ +VLP K+H T +LN+ F+ A
Sbjct: 104 KLVNHLGRSFFLSRLFDLEVGPDFESNEVIEKVRVLPRKLHLHAGTDAVLNVTFIRAPSH 163
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
LKVDVP+VF+G + PGLKKG YL +I+ ++KYLCPA+ I P I+VD+S LD G ++
Sbjct: 164 ALLKVDVPLVFRGEDVSPGLKKGAYLNTIKRTVKYLCPADIIPPYIDVDLSELDAGQKIV 223
Query: 205 MSDIEVHPSWKLL-SKNEKMPLCKISATKLEN 235
M D++VHP+ KLL SK+E P+CKI T++ +
Sbjct: 224 MGDLKVHPALKLLRSKDE--PVCKIMGTRVSD 253
>gi|186701238|gb|ACC91264.1| 50S ribosomal protein [Capsella rubella]
Length = 257
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 130/211 (61%), Gaps = 7/211 (3%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
Y TI A+PR +G +SA++R GR+P+++F Q+ D + K+++S + QI
Sbjct: 50 YAETILAVPRSVSGKSISAKERKAGRVPSIIFEQE------DGQHGGNKRLVSVQTNQIR 103
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
++ + FF S F +++RA GS +++ + LP +H T LN+ F+ A G
Sbjct: 104 KLVTHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPG 163
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
LKVD+P+VF G + PGLKKG L +I+ ++K+LCPAE I P IEVD+S LDIG ++
Sbjct: 164 ALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLV 223
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISATKLEN 235
M D++VHP+ KL+ ++ P+ KI+ ++ +
Sbjct: 224 MGDLKVHPALKLIKPKDE-PIVKIAGGRVSD 253
>gi|297799630|ref|XP_002867699.1| hypothetical protein ARALYDRAFT_492505 [Arabidopsis lyrata subsp.
lyrata]
gi|297313535|gb|EFH43958.1| hypothetical protein ARALYDRAFT_492505 [Arabidopsis lyrata subsp.
lyrata]
Length = 257
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 131/211 (62%), Gaps = 7/211 (3%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
+ TI A+PR +G +SA++R GR+P+++F Q+ D + K+++S + QI
Sbjct: 50 HAETILAVPRSVSGKSISAKERKAGRVPSIIFEQE------DGQHGGNKRLISVQTNQIR 103
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
++ + FF S F +++RA GS +++ + LP +H T LN+ F+ A G
Sbjct: 104 KLVNHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPG 163
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
LKVD+P+VF G + PGLKKG L +I+ ++K+LCPAE I P IEVD+S LDIG ++
Sbjct: 164 ALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLV 223
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISATKLEN 235
M D++VHP+ KL+ K++ P+ K++ ++ +
Sbjct: 224 MGDLKVHPALKLI-KSKDEPIVKVAGGRVSD 253
>gi|15236554|ref|NP_194093.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing
protein [Arabidopsis thaliana]
gi|4454031|emb|CAA23028.1| putative protein [Arabidopsis thaliana]
gi|7269210|emb|CAB79317.1| putative protein [Arabidopsis thaliana]
gi|18253005|gb|AAL62429.1| putative protein [Arabidopsis thaliana]
gi|21389687|gb|AAM48042.1| putative protein [Arabidopsis thaliana]
gi|21594031|gb|AAM65949.1| unknown [Arabidopsis thaliana]
gi|332659385|gb|AEE84785.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing
protein [Arabidopsis thaliana]
Length = 264
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 131/211 (62%), Gaps = 7/211 (3%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
+ TI A+PR +G +SA++R GR+P+++F Q+ D + K+++S + QI
Sbjct: 50 HAETILAVPRSVSGKSISAKERKAGRVPSIIFEQE------DGQHGGNKRLISVQTNQIR 103
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
++ + FF S F +++RA GS +++ + LP +H T LN+ F+ A G
Sbjct: 104 KLVNHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPG 163
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
LKVD+P+VF G + PGLKKG L +I+ ++K+LCPAE I P IEVD+S LDIG ++
Sbjct: 164 ALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLV 223
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISATKLEN 235
M D++VHP+ KL+ K++ P+ K++ ++ +
Sbjct: 224 MGDLKVHPALKLI-KSKDEPIVKVAGGRVTD 253
>gi|115462913|ref|NP_001055056.1| Os05g0270000 [Oryza sativa Japonica Group]
gi|55168097|gb|AAV43965.1| unknown protein [Oryza sativa Japonica Group]
gi|113578607|dbj|BAF16970.1| Os05g0270000 [Oryza sativa Japonica Group]
gi|125551610|gb|EAY97319.1| hypothetical protein OsI_19240 [Oryza sativa Indica Group]
gi|215704308|dbj|BAG93148.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 265
Score = 159 bits (403), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 128/205 (62%), Gaps = 8/205 (3%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A+PR G V+A++R GR+PA+VF Q+ + ++R ++S + KQI ++
Sbjct: 60 ILAVPRASPGRHVAAKERKAGRVPAIVFEQENGQEGGNKR------LVSVQSKQIRKLVD 113
Query: 89 SVELPFFCSTTFPLQI-RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ FF S F LQ+ +G VL++S +VLP KVH T LN+ F+ A L
Sbjct: 114 HLGRSFFLSRLFRLQVWSEHAGQGVLIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALL 173
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
K+DVP++F G ++ PGL+KG Y +I+ ++KYLCPA+ + P IEVD+S LD+G ++ M D
Sbjct: 174 KIDVPLMFIGDDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRD 233
Query: 208 IEVHPSWKLLSKNEKMPLCKISATK 232
++VHP+ KLL E+ P+C I ++
Sbjct: 234 LKVHPALKLLQSPEQ-PICSIIGSR 257
>gi|125526661|gb|EAY74775.1| hypothetical protein OsI_02667 [Oryza sativa Indica Group]
Length = 271
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 129/207 (62%), Gaps = 12/207 (5%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A+PR +G V+A++R GR+PA+VF Q+ + + K+++S + KQI ++
Sbjct: 66 ILAVPRASSGRHVAAKERKAGRVPAIVFEQE------NGQEGGNKRLVSVQSKQIRKLVD 119
Query: 89 SVELPFFCSTTFPLQI---RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ FF S F LQ+ AG G L++S +VLP KVH T LN+ F+ A
Sbjct: 120 HLGRSFFLSRLFRLQVWSEHAGQGE--LIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSA 177
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
LK+DVP++F G ++ PGL+KG Y +I+ ++KYLCPA+ + P IEVD+S LD+G ++ M
Sbjct: 178 LLKIDVPLMFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLM 237
Query: 206 SDIEVHPSWKLLSKNEKMPLCKISATK 232
D++VHP+ KLL E+ P+C I ++
Sbjct: 238 RDLKVHPALKLLQSPEQ-PICSIIGSR 263
>gi|224053837|ref|XP_002298004.1| predicted protein [Populus trichocarpa]
gi|222845262|gb|EEE82809.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 129/206 (62%), Gaps = 7/206 (3%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
TI AIPR +G VSA++R GR+P++VF Q+ D + K+++S ++ +I ++
Sbjct: 26 ETIFAIPRSDSGKNVSAKERKAGRVPSIVFEQE------DGQHGGNKRLISVKKNRIRNL 79
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ + PFF S F L +R S +++ +VLP +H T LN+ F+ A
Sbjct: 80 VNELGRPFFLSRLFELDVRPQFESDEVIEKVRVLPKAIHLHAGTDEPLNVTFIRAPSHAL 139
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
LKVD+P+VF+G + PGL+KG YL +I+ ++K++CPA+ I P I+VD+S LD+G ++ M
Sbjct: 140 LKVDIPLVFRGEDISPGLRKGAYLNTIKRTVKFVCPADLIPPFIDVDLSELDVGQKLLMG 199
Query: 207 DIEVHPSWKLLSKNEKMPLCKISATK 232
D++VHP+ KL+ E +P+ KIS +
Sbjct: 200 DLKVHPALKLVQSKE-LPVVKISGGR 224
>gi|242057875|ref|XP_002458083.1| hypothetical protein SORBIDRAFT_03g026710 [Sorghum bicolor]
gi|241930058|gb|EES03203.1| hypothetical protein SORBIDRAFT_03g026710 [Sorghum bicolor]
Length = 264
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 129/208 (62%), Gaps = 12/208 (5%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
I A+PR +G V+A++R GR+PAVVF Q+ + ++R ++S + KQI ++
Sbjct: 58 VILAVPRASSGRHVAAKERKAGRVPAVVFEQENGQEGGNKR------LVSVQSKQIRKLV 111
Query: 88 KSVELPFFCSTTFPLQI---RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
+ FF S F LQ+ AG G L++S +VLP KVH T LN+ F+ A
Sbjct: 112 DHLGRSFFLSRLFRLQVWSEHAGQGE--LIESVRVLPRKVHLHAGTDEPLNITFMRAPSS 169
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
LK+DVP++F G ++ PGL+KG Y +I+ ++KYLCPA+ + P IEVD+S LD+G ++
Sbjct: 170 ALLKIDVPLMFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLL 229
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISATK 232
M D++VHP+ KLL ++ P+C I ++
Sbjct: 230 MRDLKVHPALKLLQSPDQ-PICNIIGSR 256
>gi|115438116|ref|NP_001043461.1| Os01g0593500 [Oryza sativa Japonica Group]
gi|113532992|dbj|BAF05375.1| Os01g0593500 [Oryza sativa Japonica Group]
gi|125571028|gb|EAZ12543.1| hypothetical protein OsJ_02444 [Oryza sativa Japonica Group]
Length = 271
Score = 157 bits (397), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/207 (39%), Positives = 129/207 (62%), Gaps = 12/207 (5%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A+PR +G V+A++R GR+PA+VF Q+ + + K+++S + KQI ++
Sbjct: 66 ILAVPRASSGRHVAAKERKAGRVPAIVFEQE------NGQEGGNKRLVSVQSKQIRKLVD 119
Query: 89 SVELPFFCSTTFPLQI---RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ FF S F LQ+ AG G L++S +VLP KVH T LN+ F+ A
Sbjct: 120 HLGRSFFLSRLFRLQVWSEHAGQGE--LIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSA 177
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
LK+DVP++F G ++ PGL+KG Y +I+ ++KYLCPA+ + P IEVD+S LD+G ++ M
Sbjct: 178 LLKIDVPLMFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLM 237
Query: 206 SDIEVHPSWKLLSKNEKMPLCKISATK 232
D++VHP+ +LL E+ P+C I ++
Sbjct: 238 RDLKVHPALRLLQSPEQ-PICSIIGSR 263
>gi|334186857|ref|NP_001190814.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing
protein [Arabidopsis thaliana]
gi|332659386|gb|AEE84786.1| ribosomal L25/TL5/CTC N-terminal 5S rRNA binding domain-containing
protein [Arabidopsis thaliana]
Length = 277
Score = 155 bits (393), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 133/224 (59%), Gaps = 20/224 (8%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
+ TI A+PR +G +SA++R GR+P+++F Q+ D + K+++S + QI
Sbjct: 50 HAETILAVPRSVSGKSISAKERKAGRVPSIIFEQE------DGQHGGNKRLISVQTNQIR 103
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLP-------------IKVHRDEETG 131
++ + FF S F +++RA GS +++ + LP IK+H T
Sbjct: 104 KLVNHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAVKSPFLSLMKLIKIHLHSGTD 163
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIE 191
LN+ F+ A G LKVD+P+VF G + PGLKKG L +I+ ++K+LCPAE I P IE
Sbjct: 164 APLNVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIE 223
Query: 192 VDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLEN 235
VD+S LDIG ++ M D++VHP+ KL+ K++ P+ K++ ++ +
Sbjct: 224 VDLSQLDIGQKLVMGDLKVHPALKLI-KSKDEPIVKVAGGRVTD 266
>gi|413950495|gb|AFW83144.1| hypothetical protein ZEAMMB73_241101 [Zea mays]
Length = 305
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 127/211 (60%), Gaps = 12/211 (5%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
+ I A+PR +G V+A++R GR+PA+VF Q+ + ++R ++S QI
Sbjct: 101 HNEVILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKR------LISVRANQIR 154
Query: 85 SILKSVELPFFCSTTFPLQI---RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWA 141
++ + FF S F LQ+ AG G L++S +VLP KVH T LN+ F+ A
Sbjct: 155 KLVDHLGRSFFLSRLFSLQVWSEHAGQGE--LIESVRVLPRKVHLHAGTDEPLNITFMRA 212
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
LK+DVP++F G ++ PGL+KG Y +I+ + KYLCPA+ + P IEVD+S LD+G
Sbjct: 213 PSSALLKIDVPLMFIGEDASPGLRKGAYFNTIKRTAKYLCPADIVPPYIEVDLSELDVGQ 272
Query: 202 RVFMSDIEVHPSWKLLSKNEKMPLCKISATK 232
++ M D++VHP+ KLL ++ P+C + ++
Sbjct: 273 KLLMRDLKVHPALKLLHSPDQ-PICNFTGSR 302
>gi|413933668|gb|AFW68219.1| hypothetical protein ZEAMMB73_040273, partial [Zea mays]
Length = 201
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/156 (50%), Positives = 106/156 (67%), Gaps = 7/156 (4%)
Query: 14 NSRTPFSRTTS--YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPS 71
+S P+ RT S Y+HTIQA+PRE G R +AR+R GR+PAV+ L +
Sbjct: 21 SSPAPWRRTASASYHHTIQAVPRETAGPRAAARERRHGRVPAVLLT---LAGAAPGNGIA 77
Query: 72 RKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETG 131
+ +L+ +R+Q+ +LK + P+F ST LQ+RAG S+ +L +G VLPIKVHRDE +G
Sbjct: 78 HRHLLTADRRQLAEMLK--QSPYFLSTPVRLQVRAGERSNAILHAGTVLPIKVHRDENSG 135
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKG 167
ILNLV V AD+GT LKVD+PV FKG ++CPGLKKG
Sbjct: 136 NILNLVMVKADEGTMLKVDLPVEFKGKDACPGLKKG 171
>gi|226499442|ref|NP_001141875.1| uncharacterized protein LOC100274018 [Zea mays]
gi|194706262|gb|ACF87215.1| unknown [Zea mays]
Length = 258
Score = 154 bits (389), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 126/208 (60%), Gaps = 12/208 (5%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
I A+PR +G V+A++R GR+PA+VF Q+ + ++R ++S QI ++
Sbjct: 57 VILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKR------LISVRANQIRKLV 110
Query: 88 KSVELPFFCSTTFPLQI---RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
+ FF S F LQ+ AG G L++S +VLP KVH T LN+ F+ A
Sbjct: 111 DHLGRSFFLSRLFSLQVWSEHAGQGE--LIESVRVLPRKVHLHAGTDEPLNITFMRAPSS 168
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
LK+DVP++F G ++ PGL+KG Y +I+ + KYLCPA+ + P IEVD+S LD+G ++
Sbjct: 169 ALLKIDVPLMFIGEDASPGLRKGAYFNTIKRTAKYLCPADIVPPYIEVDLSELDVGQKLL 228
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISATK 232
M D++VHP+ KLL ++ P+C + ++
Sbjct: 229 MRDLKVHPALKLLHSPDQ-PICNFTGSR 255
>gi|255537627|ref|XP_002509880.1| 50S ribosomal protein L25, putative [Ricinus communis]
gi|223549779|gb|EEF51267.1| 50S ribosomal protein L25, putative [Ricinus communis]
Length = 252
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 76/208 (36%), Positives = 130/208 (62%), Gaps = 7/208 (3%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+AIPR +G ++ ++R GR+P++VF Q+ + + K+++S + QI +++
Sbjct: 47 TIEAIPRATSGKSIAVKERKAGRVPSIVFEQE------NGQHGGNKRLISVQANQIRNMI 100
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ FF S F L++R GS +++ +VLP VH + +N+ F+ A L
Sbjct: 101 NKLGRSFFLSKLFNLEVRPEFGSDEIIEKVRVLPRLVHLHAISDTPINVTFIRAPSDAWL 160
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KVDVP+V++G + PGL+KG YL I+ ++K+LCPA+ I P I+VD+S LD+G ++ M D
Sbjct: 161 KVDVPLVYRGEDVSPGLRKGSYLNIIKRTVKFLCPADIIPPYIDVDLSELDVGQKLVMGD 220
Query: 208 IEVHPSWKLLSKNEKMPLCKISATKLEN 235
++VHPS KL+ + E +P+ KI ++ +
Sbjct: 221 LKVHPSLKLI-QPEDLPVVKIMGARVSD 247
>gi|145687759|gb|ABP88855.1| ribosomal protein L25 [Nicotiana benthamiana]
Length = 251
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 129/215 (60%), Gaps = 7/215 (3%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
Y TI AI R +G ++A++R GR+P++VF Q+ D + K+++S + QI
Sbjct: 43 YDETIHAIARAKSGKNIAAKERKAGRVPSIVFEQE------DGQHGGNKRLISVQANQIR 96
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
++ + F S F L++R S +++ +VLP KVH + + LN+ F+ A
Sbjct: 97 KLVNHLGRSHFLSRLFDLEVRPDFDSVEVVEKVRVLPRKVHLEAGSDAPLNVTFIRAPSS 156
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
LKVDVP++F+G + PGLKKG YL I+ ++KYLCPA+ I P I+VD+S LD+G ++
Sbjct: 157 ALLKVDVPLIFRGEDVSPGLKKGSYLNIIKRTVKYLCPADVIPPYIDVDLSELDVGQKLV 216
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISATKLENPEPA 239
M D++VHP+ KL+ + P+ KI ++ + + A
Sbjct: 217 MGDLKVHPALKLVQPKDH-PVVKIMGARVSDQKKA 250
>gi|108709803|gb|ABF97598.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 containing
protein, expressed [Oryza sativa Japonica Group]
Length = 182
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/154 (51%), Positives = 105/154 (68%), Gaps = 7/154 (4%)
Query: 15 SRTPFSR--TTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSR 72
S P+ R + SY+HTIQA+PRE G R +AR+R GR+PAV+ A L +
Sbjct: 22 STAPWRRAASASYHHTIQALPRETAGPRAAARERRSGRVPAVLLA---LAGAGPGEGVAH 78
Query: 73 KQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGR 132
+++L+ +RKQ+ ILK + P+F ST LQ+RAG S+ ++ SG VLPIKVHRDE TG
Sbjct: 79 RKLLTADRKQLGEILK--QSPYFLSTPVRLQVRAGERSTAVVHSGTVLPIKVHRDETTGN 136
Query: 133 ILNLVFVWADDGTELKVDVPVVFKGVESCPGLKK 166
ILNLV V AD+GT LKV++PV FKG + CPGLKK
Sbjct: 137 ILNLVLVEADEGTMLKVNLPVEFKGEDVCPGLKK 170
>gi|357508813|ref|XP_003624695.1| 50S ribosomal protein L25 [Medicago truncatula]
gi|87162737|gb|ABD28532.1| Ribosomal protein L25 [Medicago truncatula]
gi|217072210|gb|ACJ84465.1| unknown [Medicago truncatula]
gi|355499710|gb|AES80913.1| 50S ribosomal protein L25 [Medicago truncatula]
Length = 266
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 127/220 (57%), Gaps = 13/220 (5%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
Y TI AIPR+ +G +SA++R GR+P++VF Q+ D K+++S QI
Sbjct: 50 YDETILAIPRKDSGKNISAKERKVGRVPSIVFEQE------DGHLGGNKRLISVRSDQIR 103
Query: 85 SILKSVELPFFCSTTFPLQI------RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVF 138
++ + FF S F LQ+ + ++++ +VLP +H T LN+ F
Sbjct: 104 KLVNHLGRSFFLSRLFHLQVLHQFDSDSNPNDEDIIENVRVLPRSIHLKAGTDAPLNVTF 163
Query: 139 VWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLD 198
+ A LKVDVP+VF+G + PGLKKG L +I+ ++KYLCPA+ I P I+VD+S LD
Sbjct: 164 IRAPSDAWLKVDVPIVFRGDDISPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELD 223
Query: 199 IGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPEP 238
+G +V M D+ VHP+ KLL ++ +CKI ++ +P
Sbjct: 224 VGQKVLMGDLNVHPALKLLHPKDEA-VCKIMGQRVSETQP 262
>gi|388494730|gb|AFK35431.1| unknown [Medicago truncatula]
Length = 266
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 127/220 (57%), Gaps = 13/220 (5%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
Y TI AIPR+ +G +SA++R GR+P++VF Q+ D K+++S QI
Sbjct: 50 YDETILAIPRKDSGKNISAKERKVGRVPSIVFEQE------DGHLGGNKRLISVRSDQIR 103
Query: 85 SILKSVELPFFCSTTFPLQI------RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVF 138
++ + FF S F LQ+ + ++++ +VLP +H T LN+ F
Sbjct: 104 KLVNHLGRSFFLSRLFHLQVLHQFDSDSNPNDEDIIENVRVLPRSIHLKAGTDAPLNVTF 163
Query: 139 VWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLD 198
+ A LKVDVP+VF+G + PGLKKG L +I+ ++KYLCPA+ I P I+VD+S LD
Sbjct: 164 IRAPSDAWLKVDVPIVFRGDDISPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELD 223
Query: 199 IGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPEP 238
+G +V M D+ VHP+ KLL ++ +CKI ++ +P
Sbjct: 224 VGQKVLMGDLNVHPTLKLLHPKDEA-VCKIMGQRVSETQP 262
>gi|356571771|ref|XP_003554046.1| PREDICTED: 50S ribosomal protein L25-like [Glycine max]
Length = 257
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 120/196 (61%), Gaps = 7/196 (3%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI AIPR +G +SA++R GR+P++VF Q+ D + K+++S QI ++
Sbjct: 51 TILAIPRADSGKNISAKERRAGRLPSIVFEQE------DGQHGGNKRLISVRTDQIRKLV 104
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSV-LLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ FF S F LQ+RA S +++ +VLP +H T LN+ F+ A
Sbjct: 105 NHLGRSFFLSRLFHLQVRAHFDSEDDFVETVRVLPRAIHLKAGTDAPLNVTFIRAPSNAL 164
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
LKVDVP+VF+G + PGLKKG L +I+ ++KYLCPA+ I P I+VD+S LD+G ++ M
Sbjct: 165 LKVDVPLVFRGEDVSPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMG 224
Query: 207 DIEVHPSWKLLSKNEK 222
D++VHP+ KLL ++
Sbjct: 225 DLKVHPALKLLQSRDE 240
>gi|357135392|ref|XP_003569293.1| PREDICTED: 50S ribosomal protein L25-like [Brachypodium distachyon]
Length = 269
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 127/208 (61%), Gaps = 12/208 (5%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
I A+PR +G ++A++R GR+PA+VF Q+ + ++R ++S KQI ++
Sbjct: 59 VIFAVPRASSGRHLAAKERKAGRVPAIVFEQENGQEGGNKR------LISVPSKQIRKLV 112
Query: 88 KSVELPFFCSTTFPLQI---RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
+ FF S F L++ AG G L++S +VLP KVH T LN+ F+ A
Sbjct: 113 DHLGRSFFLSRLFRLEVFSEHAGEGD--LIESVRVLPRKVHLHAGTDEPLNVTFMRAPPS 170
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
LK+DVP++F G ++ PGL+KG Y +I+ ++K+LCPA+ + P IEVD+S LD+G ++
Sbjct: 171 ALLKIDVPLMFIGEDASPGLRKGAYFNTIKRTVKFLCPADIVPPYIEVDLSELDVGQKLL 230
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISATK 232
M D+ VHP+ KLL ++ P+C I ++
Sbjct: 231 MRDLIVHPALKLLQSPDQ-PICSIIGSR 257
>gi|356560821|ref|XP_003548685.1| PREDICTED: 50S ribosomal protein L25-like isoform 1 [Glycine max]
Length = 257
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 123/196 (62%), Gaps = 7/196 (3%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A+PR +G +SA++R GR+P++VF Q+ D + K+++S QI ++
Sbjct: 51 TILAVPRADSGKNISAKERRAGRLPSIVFEQE------DGQHGGNKRLISVRTDQIRKLV 104
Query: 88 KSVELPFFCSTTFPLQIRAGSGS-SVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ FF S F L++R+G S + ++++ +VLP +H T LN+ F+ A
Sbjct: 105 NHLGRSFFLSRLFLLEVRSGFDSENDVVETVRVLPRAIHLKAGTDAPLNVTFIRAPSDAL 164
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
LKVDVP+VF+G + PGLKKG L +I+ ++KYLCPA+ I P I+VD+S LD+G ++ M
Sbjct: 165 LKVDVPLVFRGEDVSPGLKKGASLNTIKRTVKYLCPADIIPPYIDVDLSELDVGQKLVMG 224
Query: 207 DIEVHPSWKLLSKNEK 222
D++VHP+ KLL ++
Sbjct: 225 DLKVHPALKLLQPRDE 240
>gi|168044236|ref|XP_001774588.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674143|gb|EDQ60656.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 206
Score = 143 bits (361), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 122/206 (59%), Gaps = 8/206 (3%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
I PR +G VS ++R GR+P++VF+Q+ + KQ++S E KQI +
Sbjct: 9 EVILGFPRHGSGKIVSKKERRVGRVPSIVFSQE------NGHIGGNKQLISVETKQIERL 62
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+K + F S+TF L++ G+ + +VLP +H T +++N+ F+ A
Sbjct: 63 IKRLGKSSFLSSTFDLEVYDDQGN--VQAKERVLPRSIHLHAGTDKVMNVTFIRAPPTAS 120
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
LKVDVP++F G ++CPG++KGGY+ ++ ++KY CP I IEVD+S LD+G+++ +
Sbjct: 121 LKVDVPLIFIGEDACPGIRKGGYIYTMMRTVKYRCPGNSIPSGIEVDLSTLDMGEKILLR 180
Query: 207 DIEVHPSWKLLSKNEKMPLCKISATK 232
D+ V +L+ K+ +P+CK+ ++
Sbjct: 181 DLNVPSELRLVKKDSSLPVCKVMGSR 206
>gi|356560823|ref|XP_003548686.1| PREDICTED: 50S ribosomal protein L25-like isoform 2 [Glycine max]
Length = 273
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 125/212 (58%), Gaps = 23/212 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A+PR +G +SA++R GR+P++VF Q+ D + K+++S QI ++
Sbjct: 51 TILAVPRADSGKNISAKERRAGRLPSIVFEQE------DGQHGGNKRLISVRTDQIRKLV 104
Query: 88 KSVELPFFCSTTFPLQIRAGSGS-SVLLDSGKVLP----------------IKVHRDEET 130
+ FF S F L++R+G S + ++++ +VLP IK+H T
Sbjct: 105 NHLGRSFFLSRLFLLEVRSGFDSENDVVETVRVLPRAVRSLSLSLSLSLSLIKIHLKAGT 164
Query: 131 GRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKI 190
LN+ F+ A LKVDVP+VF+G + PGLKKG L +I+ ++KYLCPA+ I P I
Sbjct: 165 DAPLNVTFIRAPSDALLKVDVPLVFRGEDVSPGLKKGASLNTIKRTVKYLCPADIIPPYI 224
Query: 191 EVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEK 222
+VD+S LD+G ++ M D++VHP+ KLL ++
Sbjct: 225 DVDLSELDVGQKLVMGDLKVHPALKLLQPRDE 256
>gi|53792263|dbj|BAD52896.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 381
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/167 (38%), Positives = 103/167 (61%), Gaps = 7/167 (4%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A+PR +G V+A++R GR+PA+VF Q+ + ++R ++S + KQI ++
Sbjct: 66 ILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKR------LVSVQSKQIRKLVD 119
Query: 89 SVELPFFCSTTFPLQIRA-GSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ FF S F LQ+ + +G L++S +VLP KVH T LN+ F+ A L
Sbjct: 120 HLGRSFFLSRLFRLQVWSEHAGQGELIESVRVLPRKVHLHAGTDEPLNVTFMRAPSSALL 179
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDV 194
K+DVP++F G ++ PGL+KG Y +I+ ++KYLCPA+ + P IEVD+
Sbjct: 180 KIDVPLMFIGEDASPGLRKGAYFNTIKRTVKYLCPADIVPPYIEVDL 226
>gi|302770773|ref|XP_002968805.1| hypothetical protein SELMODRAFT_409933 [Selaginella moellendorffii]
gi|300163310|gb|EFJ29921.1| hypothetical protein SELMODRAFT_409933 [Selaginella moellendorffii]
Length = 264
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 8/207 (3%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A PR +G+R + R++G IP +V +Q+ D KQ+L +++ +L
Sbjct: 56 VLYAAPRVESGTRACMKMRNKGIIPGIVCSQE------DGHQGGHKQLLVLNSNKLNLLL 109
Query: 88 KSVELPFFCSTTFPLQIRA--GSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
K FF S + L++R L+ +VLP +H + ++LN F+ A
Sbjct: 110 KKFGQSFFMSRLYTLELRTEPDPKEGELISRERVLPRLIHVHAVSDKVLNATFIRAPPHA 169
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L+VD+P+VF G + CPG++KGGYL +IR +++Y + I IEVD+SNL+ G V +
Sbjct: 170 RLRVDIPLVFIGADVCPGIRKGGYLNTIRRTVQYYGAPDLIPKYIEVDLSNLEAGQSVRI 229
Query: 206 SDIEVHPSWKLLSKNEKMPLCKISATK 232
D+ V P + + + + P+CKI T+
Sbjct: 230 KDLNVTPGLVVYAMDPRWPVCKIVGTR 256
>gi|302784798|ref|XP_002974171.1| hypothetical protein SELMODRAFT_149576 [Selaginella moellendorffii]
gi|300158503|gb|EFJ25126.1| hypothetical protein SELMODRAFT_149576 [Selaginella moellendorffii]
Length = 264
Score = 110 bits (275), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 67/207 (32%), Positives = 112/207 (54%), Gaps = 8/207 (3%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A PR +G+R + R++G IP +V +Q+ D KQ+L +++ +L
Sbjct: 56 VLYAAPRVESGTRACMKMRNKGIIPGIVCSQE------DGHQGGHKQLLVLNSNKLNLLL 109
Query: 88 KSVELPFFCSTTFPLQIRA--GSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
K FF S + L++R L+ +VLP +H + ++LN F+ A
Sbjct: 110 KKFGQSFFMSRLYTLELRTEPDPKEGELISRERVLPRLIHVHAVSDKVLNATFIRAPPHA 169
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L+VD+P+VF G + CPG++KGGYL +IR +++Y + I IEVD+SNL+ G V +
Sbjct: 170 RLRVDIPLVFIGADVCPGIRKGGYLNTIRRTVQYYGAPDLIPKYIEVDLSNLEAGQSVRI 229
Query: 206 SDIEVHPSWKLLSKNEKMPLCKISATK 232
D+ V P + + + + P+CKI T+
Sbjct: 230 KDLNVTPGLVVYAMDPRWPVCKIVGTR 256
>gi|297722347|ref|NP_001173537.1| Os03g0612600 [Oryza sativa Japonica Group]
gi|255674701|dbj|BAH92265.1| Os03g0612600, partial [Oryza sativa Japonica Group]
Length = 66
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 54/62 (87%)
Query: 171 KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISA 230
K IRTSL YLCPAEHI PKIEVD++NLDIGDRV M+DI VHPS +LLSKNE MP+CKI A
Sbjct: 2 KKIRTSLVYLCPAEHIPPKIEVDLANLDIGDRVSMNDIPVHPSLRLLSKNETMPVCKILA 61
Query: 231 TK 232
+K
Sbjct: 62 SK 63
>gi|384245941|gb|EIE19433.1| ribosomal protein L25-like protein [Coccomyxa subellipsoidea C-169]
Length = 237
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 101/202 (50%), Gaps = 13/202 (6%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ AI RE GSRV+AR R GR PA++F+ L +N R ++S + K+ S+++
Sbjct: 44 LTAIEREGGGSRVAARLRKTGRTPAILFS---LPQNESR-------LISVDSKEATSLVR 93
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
S F L + + S VLP VH + T + N+ + +
Sbjct: 94 IHGRKGLLSRIFQLDLAVPDKP---VQSYPVLPRLVHINSVTDEVENITLMHCPPDRMVT 150
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ VP+ G E PG+KKGG+L ++ ++K + PA I IE+D+S+LD G R++ S +
Sbjct: 151 IAVPIKIVGEELSPGIKKGGHLNLVQRTVKCMGPASAIPESIEIDISSLDFGQRIYPSGV 210
Query: 209 EVHPSWKLLSKNEKMPLCKISA 230
+ P + PLCK++
Sbjct: 211 AIPPGVSTVGLVAGQPLCKLAG 232
>gi|308809493|ref|XP_003082056.1| putative protein (ISS) [Ostreococcus tauri]
gi|116060523|emb|CAL55859.1| putative protein (ISS), partial [Ostreococcus tauri]
Length = 218
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 109/224 (48%), Gaps = 13/224 (5%)
Query: 7 TVQKVAHNSRTPFSRTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTD 66
T + RT T+S + + R TG ++ R R +GR+PAV+F
Sbjct: 2 TTTRDGDGDRTSEPSTSSSFERLTCETRAGTGKGIAGRTRREGRVPAVLF---------- 51
Query: 67 RRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHR 126
R K +L+ +++++ ++ L F L++ G G+ ++ + L +VH
Sbjct: 52 RPGSVEKTLLTASERELNAAVRRHTLAGTQCEVFELEVTDGDGTPRIV---RALAKQVHM 108
Query: 127 DEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHI 186
+ N+ F+ + TE++V VPV G + PG+K+GG+++ +R ++ C ++ I
Sbjct: 109 HAYNKSVENVCFLEVEPETEVRVRVPVETLGEDVSPGVKRGGFVQILRKTVPVKCRSDSI 168
Query: 187 SPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISA 230
K VDVS LD G + + D++V KLL N +PL I+
Sbjct: 169 PKKFTVDVSALDAGKIIRIRDVKVAEGIKLLDANLDLPLIIIAG 212
>gi|413950494|gb|AFW83143.1| hypothetical protein ZEAMMB73_241101 [Zea mays]
Length = 239
Score = 93.6 bits (231), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
+ I A+PR +G V+A++R GR+PA+VF Q+ + ++R ++S QI
Sbjct: 101 HNEVILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKR------LISVRANQIR 154
Query: 85 SILKSVELPFFCSTTFPLQI---RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWA 141
++ + FF S F LQ+ AG G L++S +VLP KVH T LN+ F+ A
Sbjct: 155 KLVDHLGRSFFLSRLFSLQVWSEHAGQGE--LIESVRVLPRKVHLHAGTDEPLNITFMRA 212
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKG 167
LK+DVP++F G ++ PGL+KG
Sbjct: 213 PSSALLKIDVPLMFIGEDASPGLRKG 238
>gi|413950492|gb|AFW83141.1| hypothetical protein ZEAMMB73_241101 [Zea mays]
Length = 96
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 63/86 (73%), Gaps = 1/86 (1%)
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
LK+DVP++F G ++ PGL+KG Y +I+ + KYLCPA+ + P IEVD+S LD+G ++ M
Sbjct: 9 LKIDVPLMFIGEDASPGLRKGAYFNTIKRTAKYLCPADIVPPYIEVDLSELDVGQKLLMR 68
Query: 207 DIEVHPSWKLLSKNEKMPLCKISATK 232
D++VHP+ KLL ++ P+C + ++
Sbjct: 69 DLKVHPALKLLHSPDQ-PICNFTGSR 93
>gi|223944153|gb|ACN26160.1| unknown [Zea mays]
Length = 192
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 82/146 (56%), Gaps = 11/146 (7%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
+ I A+PR +G V+A++R GR+PA+VF Q+ + ++R ++S QI
Sbjct: 54 HNEVILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKR------LISVRANQIR 107
Query: 85 SILKSVELPFFCSTTFPLQI---RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWA 141
++ + FF S F LQ+ AG G L++S +VLP KVH T LN+ F+ A
Sbjct: 108 KLVDHLGRSFFLSRLFSLQVWSEHAGQGE--LIESVRVLPRKVHLHAGTDEPLNITFMRA 165
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKG 167
LK+DVP++F G ++ PGL+KG
Sbjct: 166 PSSALLKIDVPLMFIGEDASPGLRKG 191
>gi|255086031|ref|XP_002508982.1| predicted protein [Micromonas sp. RCC299]
gi|226524260|gb|ACO70240.1| predicted protein [Micromonas sp. RCC299]
Length = 226
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 96/203 (47%), Gaps = 16/203 (7%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
I +PR TG V+ R R G +P V+F ++L ++ + ++
Sbjct: 37 NIDVMPRTGTGKTVTKRLRRDGLVPGVLFGP----------GDQTGELLQMPKQDVERLV 86
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ L + L G + VL +V D + N+ F+ TE+
Sbjct: 87 RIYGLSGIGARILTLNFPDG------VRKQDVLAKQVIYDATNINVENVNFMPCGPETEV 140
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KV VPV +G ++CPG+KKGG+ + +L C + I +I ++S +D+GD+VF+ D
Sbjct: 141 KVKVPVRVEGDDACPGIKKGGFAWKLHKTLTVTCKGKDIPSEIVSNISAMDVGDKVFLRD 200
Query: 208 IEVHPSWKLLSKNEKMPLCKISA 230
+++ ++ ++K+P+ KI+
Sbjct: 201 LDIPEGVRVHMTDDKVPIIKIAG 223
>gi|145352002|ref|XP_001420348.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580582|gb|ABO98641.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 239
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 17/198 (8%)
Query: 38 GSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCS 97
G+ S R R +GR+P VVFA R +++ +++++ ++ L
Sbjct: 48 GTASSTRARREGRVPGVVFAP----------GSERGTMITVCEREMNAAVRKHTLAGVAC 97
Query: 98 TTFPLQIRAGSGSSVLLDSG-----KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVP 152
F L+++ + + +SG + L +V + N+ F+ TE+KV VP
Sbjct: 98 EVFDLEVQTTTATG--EESGETRRVRALAKQVQMHAYNQMVDNVCFLEVKPETEVKVRVP 155
Query: 153 VVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
V +G + PG+K+GG+++ +R ++ C ++ I + +DVS LD G + + D+ V
Sbjct: 156 VATQGEDVSPGVKRGGFVQIMRQTVPVRCRSDSIPKRFLMDVSTLDAGKVIKIGDVTVPE 215
Query: 213 SWKLLSKNEKMPLCKISA 230
KLL + +PL +I
Sbjct: 216 GVKLLDADLNLPLVRIGG 233
>gi|303284975|ref|XP_003061778.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226457108|gb|EEH54408.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 254
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/203 (30%), Positives = 93/203 (45%), Gaps = 30/203 (14%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R+ +G + + R +GR+PA++F RS SR + I LK +E
Sbjct: 69 RDASGRIAAKKLRKEGRVPAILF-----------RSGSRAG------EHISLALKDIE-- 109
Query: 94 FFCSTTFPLQIRAGSGSSVL------LDSGK-VLPIKVHRDEETGRILNLVFVWADDGTE 146
G G+ VL D + V+ +VH TG + N F+ + TE
Sbjct: 110 ----RLVTKHGHVGVGTRVLKMRFEGTDRAEDVIAKQVHLTMGTGVVENATFMPVEPTTE 165
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ VDVPV F G + CPG+K+GG+ +R S+ C + I +DVSN +G VF+
Sbjct: 166 VNVDVPVTFIGEDVCPGVKQGGFPWVMRRSVPVKCQVKDIPRVFNIDVSNFSVGKVVFLK 225
Query: 207 DIEVHPSWKLLSKNEKMPLCKIS 229
D+ V S KL N P+ +S
Sbjct: 226 DLHVPESVKLRLDNMMTPVFSMS 248
>gi|73666725|ref|YP_302741.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia
canis str. Jake]
gi|109893361|sp|Q3YT12.1|RL25_EHRCJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|72393866|gb|AAZ68143.1| LSU ribosomal protein L25P [Ehrlichia canis str. Jake]
Length = 209
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 26/208 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSP--SRKQILSTERKQIHSI 86
I A RE G+ + R G IPAVV+ KN D S S ++ LS R
Sbjct: 9 INASLRENVGTGPARAVRRNGGIPAVVYG-----KNRDSLSVFLSDREFLSKHRSA---- 59
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+T +++ G VL V + T RI ++ F + D GTE
Sbjct: 60 ---------ALSTHLIELEIGDKKEY------VLMRDVQKHPVTDRIQHVDFQFIDYGTE 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+K++VP++F + C G+K+GG L + +L C I IE+D+S+L G + +S
Sbjct: 105 IKIEVPLIFTNEQKCIGVKRGGVLNILHRTLSIKCLPNAILQNIEIDLSDLTAGHSIHVS 164
Query: 207 DIEVHPSWKLLSKNEKMPLCKISATKLE 234
D+ + P ++ K + IS+T +E
Sbjct: 165 DLNLPPEINVVMKEHNPAIVTISSTSME 192
>gi|307103465|gb|EFN51725.1| hypothetical protein CHLNCDRAFT_139900 [Chlorella variabilis]
Length = 239
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 98/203 (48%), Gaps = 15/203 (7%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQ-ILSTERKQIHSI 86
T+ A R GS S + R G+ P +VF+ P +Q +L+ + K + +
Sbjct: 50 TLAAEERGLVGSIASNKLRKAGKTPGIVFS-----------GPGGEQHLLAFDSKALGKL 98
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ + + + F LQI+ GSS + + L +VH T + N+ FV+ +
Sbjct: 99 VTKLGRTAWACSVFDLQIQGEDGSSRTV---RALGRQVHMTSTTDAVENVTFVFCPPERQ 155
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++V+VP+ G + PG+K GG + IR ++ L + I VD+S +++ D+++ +
Sbjct: 156 VRVEVPLKVIGEDVSPGIKGGGRVNWIRRTIPCLARGDSIPRDFTVDISKMELNDKLYFT 215
Query: 207 DIEVHPSWKLLSKNEKMPLCKIS 229
D+ V L N +P+ K++
Sbjct: 216 DLAVPQGAVLHRVNAALPILKVA 238
>gi|114777713|ref|ZP_01452673.1| 50S ribosomal protein L25 [Mariprofundus ferrooxydans PV-1]
gi|114551929|gb|EAU54463.1| 50S ribosomal protein L25 [Mariprofundus ferrooxydans PV-1]
Length = 208
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 100/213 (46%), Gaps = 23/213 (10%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A RE G + R R G+IPA+++ D D + ++ + I +L
Sbjct: 6 VEAELRETNGRSATRRLRRTGKIPAIIYGGDKPDLS-----------VAVDYFVISKLLN 54
Query: 89 SVELPFFCSTTFPLQIRAGSG-SSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
E F ++ ++++ G ++V+L + + PIK + +L F+ +
Sbjct: 55 QEE---FHTSMLEVKVKGSRGKNTVMLKATQWDPIK-------DTVTHLDFIRVSSSDMI 104
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+DVPVV + CPG+ KGG + IR SL+ A+ I IE+D S LDIGD V + D
Sbjct: 105 TLDVPVVAINEDKCPGVAKGGLIDVIRHSLEVTSRADSIPAHIEIDCSGLDIGDSVHIED 164
Query: 208 IEVHPSWKLLSKNEKMPLCKISATKLENPEPAV 240
+ + P ++ + ++A K + + V
Sbjct: 165 VTL-PEGAVVHHEVNFTVLNVAAQKTDTTDDEV 196
>gi|57238823|ref|YP_179959.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia
ruminantium str. Welgevonden]
gi|68053024|sp|Q5FFA2.2|RL25_EHRRG RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|68053028|sp|Q5HC84.1|RL25_EHRRW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|57160902|emb|CAH57807.1| putative 50S ribosomal protein L25 [Ehrlichia ruminantium str.
Welgevonden]
Length = 208
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 32/203 (15%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSP-----SRKQILSTERKQIHSILK 88
R G+ S R G IPAVV+ + RSP S ++ LS R
Sbjct: 14 RNSVGTGPSRTLRRNGAIPAVVYGK--------HRSPLSIYLSDREFLSKYRSA------ 59
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+T +++ G VL + + T RI ++ F + D GTE+K
Sbjct: 60 -------ALSTHLIELEIGEKKEY------VLMRDIQKHPVTDRIQHVDFQFIDHGTEIK 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VP+VF + C G+KKGG L + +L C I IEVD++NL IG + +SD+
Sbjct: 107 IEVPLVFVNEQRCVGVKKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDL 166
Query: 209 EVHPSWKLLSKNEKMPLCKISAT 231
+ ++ K L IS T
Sbjct: 167 NLPSEVTVVMKEHNPTLVTISGT 189
>gi|58578753|ref|YP_196965.1| 50S ribosomal protein L25 [Ehrlichia ruminantium str. Welgevonden]
gi|58616812|ref|YP_196011.1| 50S ribosomal protein L25 [Ehrlichia ruminantium str. Gardel]
gi|58416424|emb|CAI27537.1| Probable 50S ribosomal protein L25 [Ehrlichia ruminantium str.
Gardel]
gi|58417379|emb|CAI26583.1| Probable 50S ribosomal protein L25 [Ehrlichia ruminantium str.
Welgevonden]
Length = 219
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 32/203 (15%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSP-----SRKQILSTERKQIHSILK 88
R G+ S R G IPAVV+ + RSP S ++ LS R
Sbjct: 25 RNSVGTGPSRTLRRNGAIPAVVYGK--------HRSPLSIYLSDREFLSKYRSA------ 70
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+T +++ G VL + + T RI ++ F + D GTE+K
Sbjct: 71 -------ALSTHLIELEIGEKKEY------VLMRDIQKHPVTDRIQHVDFQFIDHGTEIK 117
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VP+VF + C G+KKGG L + +L C I IEVD++NL IG + +SD+
Sbjct: 118 IEVPLVFVNEQRCVGVKKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDL 177
Query: 209 EVHPSWKLLSKNEKMPLCKISAT 231
+ ++ K L IS T
Sbjct: 178 NLPSEVTVVMKEHNPTLVTISGT 200
>gi|347528110|ref|YP_004834857.1| 50S ribosomal protein L25 [Sphingobium sp. SYK-6]
gi|345136791|dbj|BAK66400.1| 50S ribosomal protein L25 [Sphingobium sp. SYK-6]
Length = 207
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 22/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G S R +GR+PAV++ + Q++ E K + +L
Sbjct: 6 TLSAEARDRAGKGASRALRREGRVPAVIYGNN-----------EEPQMVHVEEKILSKLL 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ FF S + + G G V + LP V T R L+ F+ + ++
Sbjct: 55 GTGH--FFNSV---VMVEVG-GKKV-----RTLPKDVAFHPVTDRPLHADFLRVSEHAQV 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V+VPVVF+ E+ PGLK+GG L +R L+ + A I I VD++ D+GD + +S
Sbjct: 104 HVNVPVVFENEEAAPGLKRGGVLNVVRHELEMIVDAAEIPDSITVDLTGFDVGDSIHISA 163
Query: 208 IEV 210
+++
Sbjct: 164 VKL 166
>gi|344923270|ref|ZP_08776731.1| 50S ribosomal protein L25 [Candidatus Odyssella thessalonicensis
L13]
Length = 198
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 22/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+A PRE G+ + R G +P VV+ + + +S + + SI
Sbjct: 6 TIEAQPREALGTGGARATRRDGLVPGVVYGHN-----------KENKFISIDPR---SIA 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K + P F S F L + G+ VL+ ++ P+ + L++ F+ +++
Sbjct: 52 KELYKPGFFSRLFALSVN-GNTEHVLVKDVQLHPV-------SDAPLHIDFMRVSKDSKI 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V++PV + PG+KKGG + + +L+ +CPA+ I +I VD++ +D G V ++D
Sbjct: 104 HVNIPVHVINDDKAPGVKKGGMVNIVHHTLEVICPADSIPSEIVVDLAKIDAGQAVHLTD 163
Query: 208 IEV 210
I++
Sbjct: 164 IQL 166
>gi|297717838|gb|ADI50062.1| LSU ribosomal protein L25p [Candidatus Odyssella thessalonicensis
L13]
Length = 197
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 91/183 (49%), Gaps = 22/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+A PRE G+ + R G +P VV+ + + +S + + SI
Sbjct: 6 TIEAQPREALGTGGARATRRDGLVPGVVYGHN-----------KENKFISIDPR---SIA 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K + P F S F L + G+ VL+ ++ P+ + L++ F+ +++
Sbjct: 52 KELYKPGFFSRLFALSVN-GNTEHVLVKDVQLHPV-------SDAPLHIDFMRVSKDSKI 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V++PV + PG+KKGG + + +L+ +CPA+ I +I VD++ +D G V ++D
Sbjct: 104 HVNIPVHVINDDKAPGVKKGGMVNIVHHTLEVICPADSIPSEIVVDLAKIDAGQAVHLTD 163
Query: 208 IEV 210
I++
Sbjct: 164 IQL 166
>gi|163794565|ref|ZP_02188536.1| branched-chain amino acid aminotransferase [alpha proteobacterium
BAL199]
gi|159180289|gb|EDP64812.1| branched-chain amino acid aminotransferase [alpha proteobacterium
BAL199]
Length = 209
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S T+ A R+ G + R +G +PAV++ D++ P + E +++
Sbjct: 2 SEISTLGASARDRAGKGSARAARREGLVPAVIYG--------DKQDPVSINLTLRELEKL 53
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
+ P F S + + AG+ +VLP + + + + L++ F+
Sbjct: 54 ------LTKPGFFSHLLDIDV-AGT-------KHRVLPRDLQQHPVSDKPLHVDFLRVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+EL VDVPV F+ E+ PGL++GG L +R S++ C A+ I KI +D++ L IGD V
Sbjct: 100 SSELTVDVPVEFENDEASPGLRRGGVLNVVRHSVEVYCRADSIPEKITIDLTGLQIGDSV 159
Query: 204 FMSDIEVHPSWKLLSKNEKMPLCKISATKLEN 235
+S + + + ++ + I+A L++
Sbjct: 160 HISAVTLPEGVRPTIEDRDFTIATIAAPTLKS 191
>gi|222630912|gb|EEE63044.1| hypothetical protein OsJ_17852 [Oryza sativa Japonica Group]
Length = 83
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 51/71 (71%), Gaps = 2/71 (2%)
Query: 163 GLKKGG-YLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
G ++GG Y +I+ ++KYLCPA+ + P IEVD+S LD+G ++ M D++VHP+ KLL E
Sbjct: 6 GYREGGAYFNTIKRTVKYLCPADIVPPYIEVDLSELDVGQKLLMRDLKVHPALKLLQSPE 65
Query: 222 KMPLCKISATK 232
+ P+C I ++
Sbjct: 66 Q-PICSIIGSR 75
>gi|412987953|emb|CCO19349.1| 50S ribosomal protein L25/general stress protein Ctc [Bathycoccus
prasinos]
Length = 287
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 95/201 (47%), Gaps = 22/201 (10%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G + R R G IP VF Q ++K + ++ + +++ +L+
Sbjct: 100 REKAGRLSANRARKDGFIPCAVFKQGEIEKTS--------EVCAVSEREVEKLLRKF--- 148
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGK----VLPIKVHRDEETGRILNLVFVWADDGTELKV 149
T + L+ + ++LD GK +P ++ ++ N+ F+ D T +KV
Sbjct: 149 ----TKYGLRTKL---IDIVLDDGKRTVKAIPQQIQMHAYKNQVNNITFMRVDPETIVKV 201
Query: 150 DVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
+PV G + CPG K G ++ R ++K C ++ I VDVSN+++ D V +++++
Sbjct: 202 PIPVKVTGQDDCPGTKLGAFVSHTRKTIKVKCRSDQIPEAFFVDVSNMNVKDNVKIANLD 261
Query: 210 VHPSWKLLSKNEKMPLCKISA 230
+ + + + P+ K++
Sbjct: 262 IPEGVVICEHDLETPIVKMAG 282
>gi|85373995|ref|YP_458057.1| 50S ribosomal protein L25/general stress protein Ctc [Erythrobacter
litoralis HTCC2594]
gi|122544539|sp|Q2NAN1.1|RL25_ERYLH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|84787078|gb|ABC63260.1| ribosomal protein L25 [Erythrobacter litoralis HTCC2594]
Length = 229
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A RE G S R +GR+PAV++ + P+ ++ E K + +
Sbjct: 6 TLPAEARERAGKGASRALRREGRVPAVIYGG--------KEEPT---MIHVEEKLL---I 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K + F ++ ++I G +V + LP V + R + F G ++
Sbjct: 52 KQLMTGHFMNSIVEIEI---GGKTV-----RTLPKDVALHPVSDRPEHADFFRLAKGGKI 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+V VPVVF E+ PGLKKGG L +R L+ +C + I +IE+DV+ ++GD + +S+
Sbjct: 104 EVSVPVVFMNEEASPGLKKGGVLNVVRHELELVCENDKIPGEIEIDVTGKEVGDSIHISE 163
Query: 208 I 208
I
Sbjct: 164 I 164
>gi|452751105|ref|ZP_21950851.1| LSU ribosomal protein L25p [alpha proteobacterium JLT2015]
gi|451961255|gb|EMD83665.1| LSU ribosomal protein L25p [alpha proteobacterium JLT2015]
Length = 223
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 21/183 (11%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A RE G S R++GR+PAV++ D++ P + E K + +L
Sbjct: 6 TIAAQLREKAGKGASRAMRNEGRVPAVIYG--------DKKEPIS---IHVEEKVLRKLL 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ F S+ +++ G + + LP V T R +++ F+ G ++
Sbjct: 55 NT---GHFLSSVVMVEVEGG-------EEHRTLPKDVQLHPVTDRPMHVDFMRLAKGQKI 104
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V+VP+ F+G + PGL +GG L +R ++ C I ++ V + L+IGD + +S
Sbjct: 105 AVNVPMNFEGEDDSPGLTRGGVLNIVRHEVEVHCRPSLIPSELTVSLKGLEIGDSIHISQ 164
Query: 208 IEV 210
+E+
Sbjct: 165 VEL 167
>gi|261855769|ref|YP_003263052.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Halothiobacillus neapolitanus c2]
gi|261836238|gb|ACX96005.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Halothiobacillus neapolitanus c2]
Length = 204
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 26/216 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A R+ G S R R +GRIPA+V+ D +P IL E IL
Sbjct: 7 ALDAARRDDQGKGASRRLRREGRIPAIVYGGD--------EAPQSVTILHNE------IL 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K +E F S L I + +L D +HR I++ F L
Sbjct: 53 KHLEHEAFYSHVLELNIDGKTSKVILRD--------LHRHPYKPLIMHADFQRVSANQSL 104
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+V VP+ F E+ G K GG + I + ++ C A + IEVD+ +LDIG + +S
Sbjct: 105 RVTVPLHFLNKETSVGAKAGGIVNVILSEIEVDCTANKLPEFIEVDMKDLDIGGSIHLSQ 164
Query: 208 IEVHPSWK----LLSKNEKMPLCKISATKLENPEPA 239
I++ + +L ++ + + I A K++ A
Sbjct: 165 IKMPAGVRIHALMLGEDHDVGVVAIHAPKVDKSAEA 200
>gi|383454411|ref|YP_005368400.1| 50S ribosomal protein L25 [Corallococcus coralloides DSM 2259]
gi|380734215|gb|AFE10217.1| 50S ribosomal protein L25 [Corallococcus coralloides DSM 2259]
Length = 229
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 98/183 (53%), Gaps = 23/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++A RE +G ++ R R+ G++PAVV+ + L ++P +S + K I +
Sbjct: 7 TLEAQAREGSGKGIARRLRAAGQVPAVVYGKHL-------KAPLH---ISVDPKAIRT-- 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
++ P +T L++ AG+ VLL ++ P+ RD IL+ F+ + ++
Sbjct: 55 -AINTPHKLNTLIQLKL-AGNDQQVLLKDYQMDPLT--RD-----ILHADFIAVTEKEQV 105
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KV++PVV G G+ GG L +R +L+ +I +IEVDV+NL I + + ++D
Sbjct: 106 KVNLPVVLTG--KAAGVADGGLLTQVRRNLEVWALPGNIPLQIEVDVTNLKIAEALHVND 163
Query: 208 IEV 210
+++
Sbjct: 164 VKL 166
>gi|338730626|ref|YP_004660018.1| 50S ribosomal protein L25P [Thermotoga thermarum DSM 5069]
gi|335364977|gb|AEH50922.1| LSU ribosomal protein L25P [Thermotoga thermarum DSM 5069]
Length = 215
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 24/195 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I+A RE TG R R R QG IP VV+ D+ N + E Q ++
Sbjct: 3 IKAAVREVTGKRPVRRLRKQGFIPGVVYGPDVEPIN-----------IVLEANQFKKLVG 51
Query: 89 SVELPFFCSTTFPLQ-IRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ S + P++ + G + + D V KV D+ T IL++ F G +
Sbjct: 52 KI------SESVPIKLVLEREGKTEVFD---VFMKKVQIDKVTDEILHIDFYKPAAGRTM 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
K+++PV K V G++KGG L+ +R + + IEVDVSNLD+GD + + D
Sbjct: 103 KINIPV--KIVGKAIGVEKGGILEVMRNEIPVETLPTAVLEYIEVDVSNLDVGDSLHVGD 160
Query: 208 IEVHPSWK-LLSKNE 221
+++ K LLSK+E
Sbjct: 161 LKLPEGMKTLLSKDE 175
>gi|209965201|ref|YP_002298116.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodospirillum centenum SW]
gi|209958667|gb|ACI99303.1| ribosomal 5S rRNA E-loop binding protein L25 [Rhodospirillum
centenum SW]
Length = 205
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 89/197 (45%), Gaps = 22/197 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R+ G + + R +GRIPAV++ + ++S E Q + + P
Sbjct: 12 RDRAGKGTARQTRREGRIPAVIYGNK-----------EKPVMISLEFNQF---FRELHRP 57
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F + F + + + +VLP V D + R L++ F+ TE+ V +PV
Sbjct: 58 GFFTHLFSITVDGATH--------RVLPRDVQFDPVSDRPLHVDFLRVSAATEIVVKIPV 109
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
F E+ PG+K+GG L +R ++ C A++I I VD+++ D+ + +S + +
Sbjct: 110 EFANGETSPGIKRGGVLNIVRHEIEVFCRADNIPEHITVDLADADLNSSIHISAVALPEG 169
Query: 214 WKLLSKNEKMPLCKISA 230
+ + + I+A
Sbjct: 170 VRPTIADRDFTIATIAA 186
>gi|407780097|ref|ZP_11127344.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor pacificus pht-3B]
gi|407298095|gb|EKF17240.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor pacificus pht-3B]
Length = 216
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 34/190 (17%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G+IPAV++ D +P
Sbjct: 6 YELKAEARERVGKGSARAIRRNGKIPAVIYG--------DNEAPL--------------- 42
Query: 87 LKSVELPFFCSTTFPLQIRAG----SGSSVLLDSG--KVLPIKVHRDEETGRILNLVFVW 140
S+ LP+ F L+I AG + +++ +D KVLP D ++++ F+
Sbjct: 43 --SITLPY--KEVF-LKIHAGGFKTTIATIEVDGKKIKVLPKDYQLDPVRDFLMHVDFLR 97
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
GT + V+VPV F E+ PG+K+GG L +R +++ CPA I IEVD++ +DIG
Sbjct: 98 IGKGTVVTVNVPVHFINDEASPGIKRGGVLNIVRHDVEFTCPATAIPEFIEVDLTGMDIG 157
Query: 201 DRVFMSDIEV 210
D +S +++
Sbjct: 158 DSAHISAVKL 167
>gi|88658579|ref|YP_506970.1| 50S ribosomal protein L25/general stress protein Ctc [Ehrlichia
chaffeensis str. Arkansas]
gi|109893362|sp|Q2GHW3.1|RL25_EHRCR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|88600036|gb|ABD45505.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ehrlichia
chaffeensis str. Arkansas]
Length = 210
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A R+ G+ S R G IPAV++ K D S +S ++ S +
Sbjct: 9 INASLRKNVGTGPSRALRLSGEIPAVIYG-----KGRDSLS------ISLSNREFVSKYR 57
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTE 146
S L +T +++ +D+ K VL V + T RI ++ F + D GTE
Sbjct: 58 SAAL-----STHLIELE--------IDNKKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTE 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+K++VP++F + C G+K+GG L + +L C + I IE+D+S L G + +S
Sbjct: 105 IKIEVPLIFTNEQKCIGIKRGGVLNILHRTLSIKCSPKAILQNIEIDLSGLTTGHSIHVS 164
Query: 207 DIEVHPSWKLLSKNEKMPLCKISATKLE 234
D+++ P + K + IS+ E
Sbjct: 165 DLKLPPEVNVTMKEHNPAIVTISSASTE 192
>gi|85708586|ref|ZP_01039652.1| ribosomal protein L25 [Erythrobacter sp. NAP1]
gi|85690120|gb|EAQ30123.1| ribosomal protein L25 [Erythrobacter sp. NAP1]
Length = 228
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 22/181 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A RE G S R +GR+PAV++ + P+ + E K++ +
Sbjct: 6 TLPAEARERAGKGASRALRREGRVPAVIYG--------GKEEPT---TIHVEEKEL---V 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K + F ++ +++ G ++ + LP V T R + F ++
Sbjct: 52 KQLMTGHFMNSIVKIEV---GGETI-----RTLPKDVALHPVTDRPTHADFFRLSRDAKV 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+V +PVVF G E PGLKKGG L +R L +C A+ I +IE+ V ++GD + +S+
Sbjct: 104 EVQIPVVFVGEEQSPGLKKGGVLNVVRHELDLICEADKIPGEIEISVEGKEVGDSIHISE 163
Query: 208 I 208
+
Sbjct: 164 V 164
>gi|68171276|ref|ZP_00544677.1| Ribosomal protein L25 [Ehrlichia chaffeensis str. Sapulpa]
gi|67999291|gb|EAM85939.1| Ribosomal protein L25 [Ehrlichia chaffeensis str. Sapulpa]
Length = 189
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 62/116 (53%)
Query: 119 VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLK 178
VL V + T RI ++ F + D GTE+K++VP++F + C G+K+GG L + +L
Sbjct: 56 VLMRDVQKHPVTDRIQHVDFQFIDYGTEIKIEVPLIFTNEQKCIGIKRGGVLNILHRTLS 115
Query: 179 YLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLE 234
C + I IE+D+S L G + +SD+++ P + K + IS+ E
Sbjct: 116 IKCSPKAILQNIEIDLSGLTTGHSIHVSDLKLPPEVNVTMKEHNPAIVTISSASTE 171
>gi|114797515|ref|YP_760114.1| 50S ribosomal protein L25/general stress protein Ctc [Hyphomonas
neptunium ATCC 15444]
gi|114737689|gb|ABI75814.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hyphomonas
neptunium ATCC 15444]
Length = 219
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 88/175 (50%), Gaps = 22/175 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE TG+ + R+ G +P V++ + D + S K+ + ++K++E
Sbjct: 13 RERTGTGGAREARNNGFVPGVLYGGGI-----DPVAISLKK---------NEVIKAIETG 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F S T L I G V+ I++H + ++L + D +KV+VPV
Sbjct: 59 HFLSATATL-IHKGERQLVIPQG-----IQMHPVTDQPMHVDLRRIKVDQ--IIKVEVPV 110
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
F G+E+ PGLKKGG L +R S++ PA I +E D+S L++GD V +S+I
Sbjct: 111 HFTGMEASPGLKKGGTLNVVRHSVELNVPAGKIPEALEADISKLEVGDNVKISNI 165
>gi|217977796|ref|YP_002361943.1| 50S ribosomal protein L25/general stress protein Ctc [Methylocella
silvestris BL2]
gi|254801056|sp|B8EK41.1|RL25_METSB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|217503172|gb|ACK50581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocella
silvestris BL2]
Length = 227
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 22/179 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R TG + R +GRIP V++ D P ++ + ++++ ++
Sbjct: 6 TLAAAARHGTGKGAARSVRREGRIPGVIYG------GGDPAEP-----ITLDYRELNKLI 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ F +T F + + AG+ V+ ++ PIK L++ F+ G L
Sbjct: 55 YAGH---FLTTLFEIDV-AGTKQRVIPRDYQLDPIK-------DLPLHVDFLRLKPGASL 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
KV+VPV F E+CPG+KKGG + +R S++ PA+ I I D+ L+I D + ++
Sbjct: 104 KVEVPVHFLNQETCPGVKKGGSVNIVRHSIELRVPADDIPEAITADLGELEINDSLHLT 162
>gi|103487102|ref|YP_616663.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingopyxis
alaskensis RB2256]
gi|122985000|sp|Q1GSP2.1|RL25_SPHAL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|98977179|gb|ABF53330.1| LSU ribosomal protein L25P [Sphingopyxis alaskensis RB2256]
Length = 212
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 22/181 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A RE G S R GR+PAVV+ + P ++ E K + +
Sbjct: 6 TLTAETRERGGKGASRELRRNGRVPAVVYGG--------KEEP---LMIHVEEKLL---M 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K + F ++ +++ G + + LP V R ++ F+ +
Sbjct: 52 KQLMTGHFMNSVVMIEV---GGKQI-----RTLPKDVAFHPVKDRPIHADFLRIAKDATV 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+V VPVVF+ E PGLK+GG L +R L+ +C A++I +I +DV+ DIGD + +S+
Sbjct: 104 QVAVPVVFQNEEKSPGLKRGGVLNIVRHELELVCDADNIPDEIAIDVTGFDIGDSIHISN 163
Query: 208 I 208
+
Sbjct: 164 V 164
>gi|149184486|ref|ZP_01862804.1| ribosomal protein L25 [Erythrobacter sp. SD-21]
gi|148831806|gb|EDL50239.1| ribosomal protein L25 [Erythrobacter sp. SD-21]
Length = 230
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 22/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A RE G S R GR+PAV++ + P ++ E K++ +
Sbjct: 6 TLPAETRERAGKGASRALRRDGRVPAVIYG--------GKEEPI---LIHVEAKEL---V 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K + F ++ +++ G + K LP V R ++ F G ++
Sbjct: 52 KQLGTGHFMNSIVTIEL---GGKKI-----KTLPKDVSLHPVNDRPEHVDFFRMVKGGKI 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+V VPVVF E+ PGLKKGG L +R L +C + I +IE+DV+ ++GD + +S+
Sbjct: 104 EVQVPVVFTNEEASPGLKKGGVLNVVRHELDLVCENDKIPSEIEIDVTGKEVGDSIHISE 163
Query: 208 IEV 210
+++
Sbjct: 164 VKL 166
>gi|334344483|ref|YP_004553035.1| 50S ribosomal protein L25 [Sphingobium chlorophenolicum L-1]
gi|334101105|gb|AEG48529.1| 50S ribosomal protein L25 [Sphingobium chlorophenolicum L-1]
Length = 204
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G S R +GR+PAV++ + Q + E K ++ +L
Sbjct: 6 TLSAEARDRAGKGASRALRREGRVPAVIYGNN-----------EEPQSIHVEEKLLNKLL 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ FF S F + G G V + LP V + R L+ F+ + +
Sbjct: 55 GTGH--FFNSVVF---VEVG-GKKV-----RTLPKDVAFHPVSDRPLHADFLRVSEHATV 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V+VPVVFK ++ PGLKKGG L + ++ + A I + VD++ LD+G+ + +S
Sbjct: 104 HVNVPVVFKNEDASPGLKKGGVLNIVAHEVELIVDAAEIPDDVVVDLTGLDVGETIHISA 163
Query: 208 IEV 210
+++
Sbjct: 164 VKL 166
>gi|402820621|ref|ZP_10870188.1| rplY protein [alpha proteobacterium IMCC14465]
gi|402511364|gb|EJW21626.1| rplY protein [alpha proteobacterium IMCC14465]
Length = 217
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 89/182 (48%), Gaps = 22/182 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A RE G + R+ G+IPAV++ D++ P + ++ E+ I +
Sbjct: 7 INAEKRERDGKGPARALRNIGKIPAVLYG--------DKKDP---ESITVEQSDITKLYN 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
S L ST + + ++ D ++ P+K IL+ F+ G ++
Sbjct: 56 SGRL---MSTLIQIDVNGDKTRAIARDV-QLHPVKDF-------ILHADFLRLGKGAKIA 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V++ V F E+CPGLK GG L +R ++ CPA I IE+D++ +IGD + +SD+
Sbjct: 105 VEIAVHFLNEETCPGLKSGGVLNVVRYQVELNCPASEIPEFIELDLAEANIGDSLHISDV 164
Query: 209 EV 210
++
Sbjct: 165 KL 166
>gi|399063059|ref|ZP_10746778.1| ribosomal protein L25, Ctc-form [Novosphingobium sp. AP12]
gi|398032813|gb|EJL26139.1| ribosomal protein L25, Ctc-form [Novosphingobium sp. AP12]
Length = 203
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 22/177 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G S R GR+PAVV+ + E K++ L +
Sbjct: 12 RERAGKGASRDLRRNGRVPAVVYG-----------GKEEPLAIHLEEKELTRQLMTGH-- 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
FF S ++I G + P V + R L+ F+ G + V+VPV
Sbjct: 59 FFNSI---IEIEVGGKKY------RTQPKDVAFHPVSDRPLHADFLRVAKGATVHVNVPV 109
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
VF+ E+ PGLK+GG L +R L+ +C AE I +I +DV+ D+G+ + S +++
Sbjct: 110 VFENEEASPGLKRGGVLNIVRHDLELVCDAEKIPHEITIDVTGFDLGESIHFSHVKL 166
>gi|37519968|ref|NP_923345.1| 50S ribosomal protein L25 [Gloeobacter violaceus PCC 7421]
gi|68053196|sp|Q7NNL2.1|RL25_GLOVI RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|35210960|dbj|BAC88340.1| 50S ribosomal protein L25 [Gloeobacter violaceus PCC 7421]
Length = 211
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 24/186 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
+ TG++ A R +GRIPAV++ ++ L E++ +LK V +
Sbjct: 9 QRATGAQPRAM-RREGRIPAVLYGH----------RGTQSLALELEQRTAEDLLKRVTI- 56
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+T PL++ G SG VL +V D G++L+L F + +D+P+
Sbjct: 57 --NNTILPLKVERGW-------SGDVLLREVQHDAVGGKLLHLSFFAVAGHGSITLDLPL 107
Query: 154 VFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
VF G G+K GG L+ + T L P + IEVD+S + +GD +++ D+ + P
Sbjct: 108 VFTG--EAVGVKMDGGLLEKVLTQLTVNTPPTDVPEAIEVDISTMQVGDMLYVKDLVLPP 165
Query: 213 SWKLLS 218
++++
Sbjct: 166 GIEVVN 171
>gi|374585774|ref|ZP_09658866.1| LSU ribosomal protein L25P [Leptonema illini DSM 21528]
gi|373874635|gb|EHQ06629.1| LSU ribosomal protein L25P [Leptonema illini DSM 21528]
Length = 194
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 98/206 (47%), Gaps = 26/206 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+A R G S R R+ GRIPA +LLD+ +P + + ++ ++
Sbjct: 4 TIEASTRSARGKNESRRLRAAGRIPA-----NLLDRGNS--TP-----IEIDDREFEKLI 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
S+ F L++ +VL ++HR +GRI ++ F + G +
Sbjct: 52 AG---GLRSSSKFKLKLNGAEQ--------EVLAKEIHRHPVSGRIFHVDFYKVNPGHKF 100
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+V + V G S G+K GG L+ LK + E I KIEVD+++L +G+ V +S
Sbjct: 101 RVAIAVELTG--SAKGVKAGGALEHYIRQLKVVTVPEKIIEKIEVDITDLGVGEAVHLSQ 158
Query: 208 IEVHPSWKLLSKNEKMPLCKISATKL 233
+ + W+ + + +C+++ +++
Sbjct: 159 LNLPSEWETRLTGDPV-VCRVAQSRM 183
>gi|148284981|ref|YP_001249071.1| 50S ribosomal protein L25 [Orientia tsutsugamushi str. Boryong]
gi|166223699|sp|A5CF34.1|RL25_ORITB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|146740420|emb|CAM80897.1| 50S ribosomal protein L25 [Orientia tsutsugamushi str. Boryong]
Length = 207
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 24/178 (13%)
Query: 42 SARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTF 100
SAR R QG++P V++ + + +P + T K++ + + PFF ST
Sbjct: 19 SARALRRQGKVPGVIYKKGI--------TPIH---VCTLEKEVAKLYRK---PFFSSTVI 64
Query: 101 PLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD-DGTELKVDVPVVFKGVE 159
LQ+ KVLP V T + ++ F+ + +G+ KV VP+ F+G E
Sbjct: 65 QLQVDD--------QRFKVLPKAVQLHPVTEFMNHIDFILVEQNGSMQKVKVPISFEGKE 116
Query: 160 SCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLL 217
G+K+GGYL ++ + LCP + I I+ D++N+ +G + +S +E+ L+
Sbjct: 117 KSLGIKRGGYLNIVKRYVDLLCPVDKIPQCIKCDIANVSVGASIKISRLELPEGCNLV 174
>gi|71064751|ref|YP_263478.1| 50S ribosomal protein L25 [Psychrobacter arcticus 273-4]
gi|109893382|sp|Q4FVB4.1|RL25_PSYA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71037736|gb|AAZ18044.1| LSU ribosomal protein L25P [Psychrobacter arcticus 273-4]
Length = 224
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 23 TSYYHTIQAIPR--ECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTER 80
T + + A+ R E G S R R Q +PA+++ +Q ++
Sbjct: 2 TINHFALNAVDRSAEVQGKGASRRLRKQNLVPAIIYG-------------GGEQPIAISI 48
Query: 81 KQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVW 140
K I+ ++KS+E F S L + V+ D + R G ++ F
Sbjct: 49 K-INELVKSLEFEAFFSHILTLNVDGEEHQVVIKD--------LQRHPAKGFPMHADFQR 99
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
G ++ ++VPV F G E PG K GG L ++ T ++ +C + +E+DVS ++IG
Sbjct: 100 VVKGQKINMNVPVHFSGREEAPGTKAGGILSTLVTDIEIVCIPSQLPEYLEIDVSGMEIG 159
Query: 201 DRVFMSDIEV 210
D +SDI++
Sbjct: 160 DLFRLSDIKL 169
>gi|182680481|ref|YP_001834627.1| 50S ribosomal protein L25/general stress protein Ctc [Beijerinckia
indica subsp. indica ATCC 9039]
gi|226736280|sp|B2IG64.1|RL25_BEII9 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|182636364|gb|ACB97138.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Beijerinckia
indica subsp. indica ATCC 9039]
Length = 221
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R TG + R +GRIP V++ D P ++ + ++++ ++
Sbjct: 6 TLAATVRGGTGKGAARSIRREGRIPGVIYG------GGDAPEP-----ITLDYRELNKLI 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ F +T F +++ +V+P D G+ L++ F+ G L
Sbjct: 55 YAGH---FLTTIFDIEVEGAKQ--------RVVPRDYQLDPVKGQPLHVDFLRLKPGATL 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KV VP+ F + CPGLKKGG L +R +++ PA+ + + D+ L+I + + +S
Sbjct: 104 KVSVPIHFINADICPGLKKGGTLNIVRHAIELKVPADAMPDVLTADLHALEIAESMHVSA 163
Query: 208 IEVHPSWKLLSKNEKMPLCKI 228
I + L++ + + I
Sbjct: 164 ITLPEGCSLVATDRDFTIATI 184
>gi|93005015|ref|YP_579452.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter
cryohalolentis K5]
gi|109893383|sp|Q1QED5.1|RL25_PSYCK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|92392693|gb|ABE73968.1| LSU ribosomal protein L25P [Psychrobacter cryohalolentis K5]
Length = 224
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 24/188 (12%)
Query: 23 TSYYHTIQAIPR--ECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTER 80
T + + A+ R E G S R R Q +PA+++ P+ I
Sbjct: 2 TINHFALNAVDRSAELQGKGASRRLRKQNLVPAIIYG--------GGEQPTAISI----- 48
Query: 81 KQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVW 140
+I+ ++KS+E F S L + V+ D + R G ++ F
Sbjct: 49 -KINELVKSLEFEAFFSHILTLNVDGEEHQVVIKD--------LQRHPAKGFPMHADFQR 99
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
G ++ ++VPV F G E PG K GG L ++ T ++ +C + +E+DVS ++IG
Sbjct: 100 VVKGQKINMNVPVHFSGREEAPGTKAGGVLSTLVTDIEIVCIPSQLPEYLEIDVSGMEIG 159
Query: 201 DRVFMSDI 208
D +SDI
Sbjct: 160 DLFRLSDI 167
>gi|337287648|ref|YP_004627120.1| 50S ribosomal protein L25 [Thermodesulfobacterium sp. OPB45]
gi|334901386|gb|AEH22192.1| 50S ribosomal protein L25 [Thermodesulfobacterium geofontis OPF15]
Length = 201
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%), Gaps = 25/196 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ AI RE TG + + R QG IPA+V+ +S + L + +
Sbjct: 6 LNAIKREKTGKEICKKLRKQGLIPAIVYGPHFQPLPIAVKSSELESALIKHKGE------ 59
Query: 89 SVELPFFCSTTFPLQIRAGSGSSV--LLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F LQ+ G S + +L + P+ T +I+++ F+ +
Sbjct: 60 --------TILFNLQLANGEPSKIQAILKDHQTHPV-------TDKIIHIDFLAIHEKET 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ +DVP+ F G G+ KGG L+ + L C + KI VD+SNLDIGD + +
Sbjct: 105 ITIDVPLEFIG--KPVGISKGGILEILLHELTIECLPSEVPDKITVDISNLDIGDVLHVK 162
Query: 207 DIEVHPSWKLLSKNEK 222
DI+V K++ E+
Sbjct: 163 DIKVPKGIKVVDNPEE 178
>gi|58584353|ref|YP_197926.1| 50S ribosomal protein L25 [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|68053026|sp|Q5GTJ0.1|RL25_WOLTR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|58418669|gb|AAW70684.1| Ribosomal protein L25 (general stress protein Ctc) [Wolbachia
endosymbiont strain TRS of Brugia malayi]
Length = 204
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A R+ T ++ R +G IPAVV+ + N + S K+
Sbjct: 8 TINAELRDVTKTKAIRSLRKKGNIPAVVYGKG---HNNVNLTLSAKEFT----------- 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K +L F + L I +++ D I+ H ++T I ++ F + D G+E+
Sbjct: 54 KQYKLGFLSAHVIELDISGKKEYALVRD------IQWHVVKDT--IQHVDFQFVDKGSEI 105
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
K+D+P+ F PG+K GG L + S+ C + I IEVD+S IG V +SD
Sbjct: 106 KIDIPLSFVNESKSPGIKLGGVLNVLCRSITVKCSPDKIPQAIEVDLSGKMIGQSVHISD 165
Query: 208 IEVHPSWKLLS-KNEKMPLCKISA 230
+++ KL + + E + ISA
Sbjct: 166 VKLPGGVKLAAHEEENFTVVTISA 189
>gi|398354514|ref|YP_006399978.1| 50S ribosomal protein L25 [Sinorhizobium fredii USDA 257]
gi|390129840|gb|AFL53221.1| 50S ribosomal protein L25 [Sinorhizobium fredii USDA 257]
Length = 204
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 90/187 (48%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A RE G S R G IPAV++ D+++P +LST+
Sbjct: 2 SQSYELKAETRERVGKGSSRELRRNGLIPAVIYG--------DKQAP-LSIVLSTKE--- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
+ + F +T L + +G + +VLP D +++ F+
Sbjct: 50 --VTMKIHAGGFMTTVATLDV---NGEKI-----RVLPKDYQLDPVRDFTMHVDFLRVSK 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G+++ V VPV F+ E PGLK+GG L +R ++ A++I + VD+S L IGD V
Sbjct: 100 GSQVSVQVPVHFENEEKSPGLKQGGTLNIVRHEVELNVSADNIPEFLTVDLSGLKIGDTV 159
Query: 204 FMSDIEV 210
+SD+++
Sbjct: 160 HISDVKL 166
>gi|224171812|ref|XP_002339565.1| predicted protein [Populus trichocarpa]
gi|222875359|gb|EEF12490.1| predicted protein [Populus trichocarpa]
Length = 92
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 168 GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCK 227
YL +I+ ++K++CPA+ I P I+VD+S LD+G ++ M D++VHP+ KL+ E +P+ K
Sbjct: 22 AYLNTIKRTVKFVCPADLIPPFIDVDLSELDVGQKLLMGDLKVHPALKLVQSKE-LPVVK 80
Query: 228 ISATKLEN 235
IS + +
Sbjct: 81 ISGGRASD 88
>gi|315122138|ref|YP_004062627.1| 50S ribosomal protein L25 [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495540|gb|ADR52139.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Liberibacter solanacearum CLso-ZC1]
Length = 191
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 80/184 (43%), Gaps = 22/184 (11%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++ I RE G S R G+IPA ++ S + LST+ I
Sbjct: 6 YKLKTITREKVGKGSSRLLRRNGKIPATIYGN---------ISSPKSIALSTK-----DI 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T F + + +S +VLP D + ++++ F+ + +
Sbjct: 52 SKRLYSKHFMTTIFTIDLGK--------ESIRVLPKDYQLDPVSDVLIHMDFLQISEKST 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V VP+ F PGLK GG L I + LCPA I I D+ L IGD + M+
Sbjct: 104 ISVQVPIRFINQNKSPGLKMGGSLNIICHEIPLLCPANKIPDSISADLDGLKIGDNIHMT 163
Query: 207 DIEV 210
DI +
Sbjct: 164 DIRL 167
>gi|255003661|ref|ZP_05278625.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
marginale str. Puerto Rico]
gi|255004786|ref|ZP_05279587.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
marginale str. Virginia]
Length = 217
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%)
Query: 130 TGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPK 189
+G + ++ F + D G E+KV+VP+VF + C G+K GG L + SL C + I
Sbjct: 88 SGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGALNILHRSLLIRCAPDAIPQS 147
Query: 190 IEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISAT 231
+EVD+ +L IG + +SD+ + + ++ K E + +SAT
Sbjct: 148 LEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIASVSAT 189
>gi|254995469|ref|ZP_05277659.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
marginale str. Mississippi]
Length = 218
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%)
Query: 130 TGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPK 189
+G + ++ F + D G E+KV+VP+VF + C G+K GG L + SL C + I
Sbjct: 88 SGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGALNILHRSLLIRCAPDAIPQS 147
Query: 190 IEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISAT 231
+EVD+ +L IG + +SD+ + + ++ K E + +SAT
Sbjct: 148 LEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIASVSAT 189
>gi|56417306|ref|YP_154380.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
marginale str. St. Maries]
gi|269958304|ref|YP_003328091.1| 50S ribosomal protein L25 [Anaplasma centrale str. Israel]
gi|68053041|sp|Q5P9A5.1|RL25_ANAMM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56388538|gb|AAV87125.1| 50S ribosomal protein L25 [Anaplasma marginale str. St. Maries]
gi|269848133|gb|ACZ48777.1| 50S ribosomal protein L25 [Anaplasma centrale str. Israel]
Length = 218
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%)
Query: 130 TGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPK 189
+G + ++ F + D G E+KV+VP+VF + C G+K GG L + SL C + I
Sbjct: 88 SGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGALNILHRSLLIRCAPDAIPQS 147
Query: 190 IEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISAT 231
+EVD+ +L IG + +SD+ + + ++ K E + +SAT
Sbjct: 148 LEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIASVSAT 189
>gi|154252704|ref|YP_001413528.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Parvibaculum
lavamentivorans DS-1]
gi|171769611|sp|A7HVD8.1|RL25_PARL1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|154156654|gb|ABS63871.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Parvibaculum
lavamentivorans DS-1]
Length = 216
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 95/185 (51%), Gaps = 24/185 (12%)
Query: 27 HTIQAIPRECTGSRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
T++A RE GS+ + R R GR+PAV++ D++SP ++++ K + +
Sbjct: 5 QTLKAEARE-KGSKGAVRSLRRAGRVPAVIYG--------DKQSP---ELIAVSYKDVSA 52
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ ++ F S ++I + +V+P V + I+++ F+
Sbjct: 53 LYQT---GTFMSHVLDVEIGG--------KTERVIPRDVQFEPVRDFIIHVDFLRLGKNA 101
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ VDVPV F E+ PG+K GG L +R ++ +CPA+ I ++++D++ ++G + +
Sbjct: 102 TVTVDVPVHFHNHEASPGIKAGGVLNIVRHEVELVCPADAIPEQLDIDLTGFEMGSSIHI 161
Query: 206 SDIEV 210
S +++
Sbjct: 162 SAVKL 166
>gi|282891672|ref|ZP_06300159.1| hypothetical protein pah_c188o047 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175585|ref|YP_004652395.1| 50S ribosomal protein L25 [Parachlamydia acanthamoebae UV-7]
gi|281498462|gb|EFB40794.1| hypothetical protein pah_c188o047 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336479943|emb|CCB86541.1| 50S ribosomal protein L25 [Parachlamydia acanthamoebae UV-7]
Length = 186
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R +G+IPAV++ + S + LS + + L+ VE +T F L+
Sbjct: 20 RREGKIPAVIYKKG-----------SSGEELSVDSIMFTAALRKVEPGHLSTTIFILEDE 68
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
G+ V++ ++ + +++L F DGT + V VP+ GV CPG+K
Sbjct: 69 NGAERRVIVK-------EIQYNVTNYDVIHLDFEELIDGTPVNVKVPIEIVGVADCPGIK 121
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLL 217
GG + + SLK C + I +D+S L +G+ +SD+E+ + + L
Sbjct: 122 LGGVPRQVIRSLKVRCLPKDIPASFPIDISTLSLGESRRLSDLEIANTLRPL 173
>gi|296446566|ref|ZP_06888508.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylosinus
trichosporium OB3b]
gi|296255920|gb|EFH03005.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylosinus
trichosporium OB3b]
Length = 227
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 93/201 (46%), Gaps = 22/201 (10%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R TG + R +GRIP V++ D +P LS ++K++ ++
Sbjct: 7 LAAAVRSGTGKGAARSVRREGRIPGVIYG------GGDAPTP-----LSLDQKELTKLIY 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F +T F L I + + +P D L++ F+ G+ L+
Sbjct: 56 AGH---FLTTIFELDIDG--------KTERAIPRDYQLDVVKDTPLHVDFLRLRAGSRLR 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+DVPV F E+ PGLK+GG L + S++ PA++I I D++ L+ D + +S
Sbjct: 105 IDVPVHFINHEASPGLKRGGSLNVVYHSVEMWVPADNIPDGITGDLTGLEFNDALHISAF 164
Query: 209 EVHPSWKLLSKNEKMPLCKIS 229
+ P+ K + ++ + I+
Sbjct: 165 TLPPNCKPTNPDKNFTVVSIT 185
>gi|262276844|ref|ZP_06054637.1| ribosomal protein L25, Ctc-form [alpha proteobacterium HIMB114]
gi|262223947|gb|EEY74406.1| ribosomal protein L25, Ctc-form [alpha proteobacterium HIMB114]
Length = 235
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 22/188 (11%)
Query: 23 TSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQ 82
+S +TI+A+ R + RS+G +P +++ +DKN + LS ++
Sbjct: 2 SSENNTIEAVLRSTKTKSELNKLRSEGFVPGILYGD--IDKNIN---------LSVKKST 50
Query: 83 IHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD 142
+ LK+ F S F + + +VLP + + + + +++ F
Sbjct: 51 LDHFLKTTN---FKSKVFKINLDGKEY--------EVLPRDIEFENISNQPIHVDFQKLS 99
Query: 143 DGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDR 202
T++ V +PV F E+CPGLK GG L +R ++ CPA+ I ++ VD++ +IG+
Sbjct: 100 TNTKVVVWIPVKFLNEETCPGLKMGGVLNIVRRKVELDCPADKIPSELNVDLAKREIGES 159
Query: 203 VFMSDIEV 210
+ +S I +
Sbjct: 160 IHISAINL 167
>gi|407784048|ref|ZP_11131235.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibaculum
indicum P24]
gi|407198596|gb|EKE68628.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibaculum
indicum P24]
Length = 207
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 86/175 (49%), Gaps = 22/175 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R+ G + R QG +P V++ D++SP +++ K++ L+ P
Sbjct: 12 RDRAGKGAAREARRQGLVPGVIYG--------DKQSPV---MINLNAKELERQLRR---P 57
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F + F +++ G D+ +VL ++ +D T R L++ F+ + ++V VPV
Sbjct: 58 GFFNHLF--EVKVGK------DTHRVLARELQQDPVTDRALHVDFLRVSKNSRIEVAVPV 109
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
F PGLK+GG L +R ++ C E I ++ +D++ D+GD + +S +
Sbjct: 110 HFINETKSPGLKRGGVLNIVRHEVEVFCSPEAIPEELVIDLTGWDVGDSIHISAV 164
>gi|222475670|ref|YP_002564087.1| 50S ribosomal protein L25 [Anaplasma marginale str. Florida]
gi|254801033|sp|B9KHC7.1|RL25_ANAMF RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|222419808|gb|ACM49831.1| 50S ribosomal protein L25 (rplY) [Anaplasma marginale str. Florida]
Length = 218
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%)
Query: 130 TGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPK 189
+G + ++ F + D G E+KV+VP+VF + C G+K GG L + SL C + I
Sbjct: 88 SGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGALNILHRSLLIRCAPDAIPQS 147
Query: 190 IEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISAT 231
+EVD+ +L IG + +SD+ + + ++ K E + +SAT
Sbjct: 148 LEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVVASVSAT 189
>gi|420243915|ref|ZP_14747776.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF080]
gi|398057374|gb|EJL49341.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF080]
Length = 201
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 96/215 (44%), Gaps = 24/215 (11%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G S R G IPAV++ D++SP + + E +
Sbjct: 6 YELKAEARERVGKGSSRELRRNGFIPAVIYG--------DKQSPLAIALSTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ +G + +VLP D +++ F+ TE
Sbjct: 52 TKRIHAGGFMTTIATIEV---NGEKI-----QVLPKDYQLDPVRDFTMHVDFLRVSGNTE 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V+VPV F E PG+K GG L +R ++ LCPA I + VD++ IGD + +S
Sbjct: 104 VSVEVPVHFVNEEKSPGIKIGGVLNIVRHEVELLCPANDIPEFLTVDLTGAKIGDSLHIS 163
Query: 207 DIEVHPSWKLLSKNEKMPLCKI--SATKLENPEPA 239
+++ + + + + I A + EPA
Sbjct: 164 AVKLPAGARPVIADRDFTIATIVAPAAGVAEEEPA 198
>gi|390451314|ref|ZP_10236890.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor aquibiodomus RA22]
gi|389661154|gb|EIM72783.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor aquibiodomus RA22]
Length = 217
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 95/210 (45%), Gaps = 34/210 (16%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G++PAV++ + + +P
Sbjct: 6 YELKAEARERVGKGSARAIRRNGKVPAVIYGE--------KDAPL--------------- 42
Query: 87 LKSVELPFFCSTTFPLQIRAGSG----SSVLLDSGK--VLPIKVHRDEETGRILNLVFVW 140
S+ LP+ ++I G +++ +D K VLP D ++++ F+
Sbjct: 43 --SITLPY---KEVSMKIFGGGFLTTIATIDVDGKKIQVLPKDYQLDPVRDFVMHVDFLR 97
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
GT + V+VPV F E+ PG+K+GG L +R +++ CPA I IEVD+ +DIG
Sbjct: 98 IGKGTVVTVNVPVHFINEETAPGIKRGGVLNVVRHEVEFTCPATAIPDYIEVDLDGMDIG 157
Query: 201 DRVFMSDIEVHPSWKLLSKNEKMPLCKISA 230
D +S +++ + + + I+A
Sbjct: 158 DSAHISAVKLPAGVEPTIADRDFTIATIAA 187
>gi|294011768|ref|YP_003545228.1| ribosomal protein L25 [Sphingobium japonicum UT26S]
gi|390167703|ref|ZP_10219683.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingobium
indicum B90A]
gi|292675098|dbj|BAI96616.1| ribosomal protein L25 [Sphingobium japonicum UT26S]
gi|389589568|gb|EIM67583.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingobium
indicum B90A]
Length = 204
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G S R +GR+PAV++ + Q + E K ++ +L
Sbjct: 6 TLSAEARDRAGKGASRALRREGRVPAVIYGNN-----------EEPQSIHVEEKLLNKLL 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ FF S F + G G V + L V T R L+ F+ + +
Sbjct: 55 GTGH--FFNSVVF---VEVG-GKKV-----RTLAKDVAFHPVTDRPLHADFLRVSEHATV 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V+VPV+FK ++ PGLKKGG L + ++ + A I + +D++ LD+GD + +
Sbjct: 104 HVNVPVIFKNEDASPGLKKGGVLNIVAHEIELIVDAAEIPDDVVIDLAGLDVGDSIHIGA 163
Query: 208 IEVHPSWKLLSKNEKMPLCKISA 230
+++ K + I A
Sbjct: 164 VKLPKGAKAAHDETDFTVATIVA 186
>gi|91205677|ref|YP_538032.1| 50S ribosomal protein L25 [Rickettsia bellii RML369-C]
gi|157826865|ref|YP_001495929.1| 50S ribosomal protein L25 [Rickettsia bellii OSU 85-389]
gi|109893391|sp|Q1RI71.1|RL25_RICBR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166223713|sp|A8GVL5.1|RL25_RICB8 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91069221|gb|ABE04943.1| 50S ribosomal protein L25 [Rickettsia bellii RML369-C]
gi|157802169|gb|ABV78892.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
bellii OSU 85-389]
Length = 202
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G+ + R +GR+PA+++ +++P +S E K+I +
Sbjct: 7 LEAKSRNEFGTGAARALRREGRVPAIIYGA--------KKTPVS---ISLEEKEITKYYR 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I KVLP V T + ++ FV+ +D T+ K
Sbjct: 56 K---PAFISQLINLTIEG--------TQYKVLPKAVELHPVTDIVRHVDFVFLEDKTQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VPVV++G E G+K+GGY ++ + LC +I + +DV+N+ I + S +
Sbjct: 104 MEVPVVYEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKV 163
Query: 209 EVHPSWKLLSKNE 221
++ +K E
Sbjct: 164 KLPEGCSFTTKKE 176
>gi|227822859|ref|YP_002826831.1| 50S ribosomal protein L25 [Sinorhizobium fredii NGR234]
gi|227341860|gb|ACP26078.1| 50S ribosomal protein L25 [Sinorhizobium fredii NGR234]
Length = 228
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 14 NSRTPFSRTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRK 73
N++ S + +Y ++A RE G S R G IPAV++ D+++P
Sbjct: 19 NNQKGLSMSQTY--ELKAETRERVGKGSSRELRRNGLIPAVIYG--------DKQAPLSI 68
Query: 74 QILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRI 133
+ + E + + F +T + + +G + +VLP D
Sbjct: 69 ALSTKE------VTMKIHAGGFMTTVATIDV---NGEKI-----RVLPKDYQLDPVRDFT 114
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
+++ F+ G+++ V VPV F+ E PGLK+GG L +R ++ A++I + VD
Sbjct: 115 MHVDFLRVSKGSQVSVQVPVHFENEEKSPGLKQGGTLNIVRHEVELNVSADNIPEFLSVD 174
Query: 194 VSNLDIGDRVFMSDIEV 210
+S L IGD V +SD+++
Sbjct: 175 LSGLKIGDTVHISDVKL 191
>gi|334141926|ref|YP_004535133.1| 50S ribosomal protein L25 [Novosphingobium sp. PP1Y]
gi|359401741|ref|ZP_09194707.1| large subunit ribosomal protein L25 [Novosphingobium
pentaromativorans US6-1]
gi|333939957|emb|CCA93315.1| large subunit ribosomal protein L25 [Novosphingobium sp. PP1Y]
gi|357596906|gb|EHJ58658.1| large subunit ribosomal protein L25 [Novosphingobium
pentaromativorans US6-1]
Length = 226
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 22/177 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G S R GR+PAVV+ + + E K++ ++ +
Sbjct: 29 RERAGKGASRALRRDGRVPAVVYGGN-----------EEPLAIHVEAKEL---VRQLGTG 74
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ++ +++ G L + LP V + R L++ F+ G + V+VPV
Sbjct: 75 HFFNSIVEVEV----GGKKL----RTLPKDVAFHPVSDRPLHVDFLRLAKGASVHVNVPV 126
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
F E PGLK+GG L +R L+ +C A+ I +I +DV+ D+G+ + +S +++
Sbjct: 127 SFVNEEKAPGLKRGGVLNVVRHELELVCAADKIPEEIAIDVTGFDVGESIHISHVKL 183
>gi|163761599|ref|ZP_02168670.1| 50S ribosomal protein L25 [Hoeflea phototrophica DFL-43]
gi|162281195|gb|EDQ31495.1| 50S ribosomal protein L25 [Hoeflea phototrophica DFL-43]
Length = 234
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 105/214 (49%), Gaps = 28/214 (13%)
Query: 5 CRTVQKVAHNSRTPFSRTTSYYHTIQAIPRECTGSRVSARD-RSQGRIPAVVFAQDLLDK 63
C + A RT S + ++A R G + SAR+ R G IPAV++
Sbjct: 6 CHNGSRQAAFIRTSKGNAMSNTYELKAEARAQVG-KGSARELRRNGLIPAVIYG------ 58
Query: 64 NTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK 123
D++ P ++ RK + LK + F +T + + G+ SVL ++ P+
Sbjct: 59 --DKKDPVS---IALSRKDV--TLK-IHAGGFMTTIATIDVD-GTKYSVLPKDYQLDPV- 108
Query: 124 VHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPA 183
RD ++++ F+ T++ V++PV F+ E PG+K+GG L +R +++ CPA
Sbjct: 109 --RD----FLMHVDFLRISKNTQVTVEIPVHFENEEKSPGIKRGGVLNVVRHTVECNCPA 162
Query: 184 EHISPKIEVDVSNLDIGDRVFMSDIE----VHPS 213
I + VD++ L++GD V +S + VHP+
Sbjct: 163 NSIPEALIVDLTGLEVGDGVHISHVTLPEGVHPT 196
>gi|58698057|ref|ZP_00372981.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila ananassae]
gi|58535414|gb|EAL59489.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila ananassae]
Length = 203
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 39/220 (17%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A R+ T ++ R +G IP +++ K D + +
Sbjct: 8 TINAELRDITKTKAMHSLRKKGNIPGIIYG-----KGHDNVNLT---------------- 46
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLD---SGK-----VLPIKVHRDEETGRILNLVFV 139
+ F Q ++GS S+ L++ SGK V I++H ++T + ++L FV
Sbjct: 47 -------LSAKEFTKQYKSGSLSAHLIELNISGKKEYALVRDIQLHVVKDTVQHVDLQFV 99
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
D G+E+K+D+P+ F PG+K GG L + S+ C + I IEVD+S I
Sbjct: 100 --DKGSEIKIDIPLSFVNESKAPGIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMI 157
Query: 200 GDRVFMSDIEVHPSWKLLS-KNEKMPLCKISATKLENPEP 238
G + ++D+++ K ++ + E + ISA + EP
Sbjct: 158 GQSIHINDVKLPEGVKFVAHEEENFTIVTISAADSDVEEP 197
>gi|159487761|ref|XP_001701891.1| predicted protein [Chlamydomonas reinhardtii]
gi|158281110|gb|EDP06866.1| predicted protein [Chlamydomonas reinhardtii]
Length = 373
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%)
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
+GS S L +V P +V + T R+ L ++ ++ VDVPV + PG+K
Sbjct: 244 SGSTSGTQLGMLRVKPTRVFVNAVTQRVEGLDLIYCPPERQVLVDVPVRLLNDDLAPGVK 303
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPL 225
KGG++ + +++Y I P IEV+V N+D+ + + D+ + P KL K+ P+
Sbjct: 304 KGGWIALFKRTVRYKALGGAIPPYIEVNVRNMDLDQDMLVRDMPIPPGTKLYEKDYNAPV 363
Query: 226 CK 227
+
Sbjct: 364 LR 365
>gi|189184105|ref|YP_001937890.1| 50S ribosomal protein L25/general stress protein Ctc [Orientia
tsutsugamushi str. Ikeda]
gi|226736344|sp|B3CTF9.1|RL25_ORITI RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189180876|dbj|BAG40656.1| 50S ribosomal protein L25 [Orientia tsutsugamushi str. Ikeda]
Length = 207
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 26/181 (14%)
Query: 42 SARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTF 100
SAR R QG++P V++ + + +P + T K++ + + PFF ST
Sbjct: 19 SARALRRQGKVPGVIYKKGI--------TPIH---VCTLEKEVAKLYRK---PFFSSTVI 64
Query: 101 PLQIRAGSGSSVLLDSGKVLP--IKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGV 158
LQ+ KVLP +++H E ++ + V + G + KV VP+ F+G
Sbjct: 65 QLQVDD--------QRFKVLPKAVQLHPVTEFINHIDFILVEQNGGIQ-KVKVPISFEGK 115
Query: 159 ESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
+ G+K+GGYL ++ + LCP + I I+ D++N+ +G + +S +E+ L+
Sbjct: 116 DKSLGIKRGGYLNIVKRYVDLLCPVDKIPQCIKCDIANVPVGASIKVSRLELPEGCNLVK 175
Query: 219 K 219
+
Sbjct: 176 R 176
>gi|304391297|ref|ZP_07373241.1| ribosomal protein L25, Ctc-form [Ahrensia sp. R2A130]
gi|303296653|gb|EFL91009.1| ribosomal protein L25, Ctc-form [Ahrensia sp. R2A130]
Length = 227
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 86/193 (44%), Gaps = 34/193 (17%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S +T+ A R+ G + R +PAV++ D++ P
Sbjct: 2 SEDNTLTAQARDRVGKGAARELRRNNMVPAVIYG--------DKKDP------------- 40
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLD------SGKVLPIKVHRDEETGRILNLV 137
S+ LP +T L I AG + LLD KVLP + ++++
Sbjct: 41 ----LSIALPRKETT---LAIHAGGFMTTLLDIEVDGKKHKVLPKDYQLHPVSDVVMHVD 93
Query: 138 FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
+ T + V++PVVF E C GLK GG L +R +++ CPA I E+D+++
Sbjct: 94 LLRVSAKTAVTVEIPVVFLNEEECIGLKAGGTLNVVRFTVEVNCPANSIPDNFEIDLTSY 153
Query: 198 DIGDRVFMSDIEV 210
DIGD V +S +++
Sbjct: 154 DIGDSVNISAVDM 166
>gi|316935875|ref|YP_004110857.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5
[Rhodopseudomonas palustris DX-1]
gi|315603589|gb|ADU46124.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodopseudomonas palustris DX-1]
Length = 229
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 2/112 (1%)
Query: 112 VLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGY 169
V+LD K V+P H D L++ F+ G +++ VP+ KG+E PG+K+GG
Sbjct: 66 VVLDGQKHRVIPRDYHLDPVKDFPLHVDFLRLGAGATIRISVPLHLKGLEVAPGVKRGGT 125
Query: 170 LKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ ++ PA++I IE DVSNLDIG + +SDI + K +S+ +
Sbjct: 126 FNIVTHTVDLEAPADNIPQFIEADVSNLDIGVSLHLSDIALPTGVKSVSRED 177
>gi|157825998|ref|YP_001493718.1| 50S ribosomal protein L25 [Rickettsia akari str. Hartford]
gi|166223712|sp|A8GP85.1|RL25_RICAH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|157799956|gb|ABV75210.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
akari str. Hartford]
Length = 199
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A PR G+ + R +GR+PA+++ ++P +S E K +I K
Sbjct: 7 LEAKPRTEFGTGAARALRREGRVPAIIYGAG--------KTPVS---ISLEEK---AITK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S + I KVLP V T + ++ FV+ + T+ K
Sbjct: 53 YYRKPAFISQLINVTIDQ--------KQYKVLPKAVELHPVTDMVRHVDFVFLEAKTQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VP+V++G E G+K+GGY ++ + LC +I + +DV+N+ I + S I
Sbjct: 104 MEVPIVYEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKI 163
Query: 209 EVHPSWKLLSKNE 221
E+ ++K E
Sbjct: 164 ELPKGCSFVTKKE 176
>gi|357026103|ref|ZP_09088211.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium
amorphae CCNWGS0123]
gi|355542067|gb|EHH11235.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium
amorphae CCNWGS0123]
Length = 213
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 22/210 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G++PAV++ DR+ P + + I
Sbjct: 6 YELKAEAREQVGKGSARAVRRNGKVPAVIYG--------DRQPPLAIALTYKD------I 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T + + G + +VLP D +++ F+ TE
Sbjct: 52 YYKIHGGGFLTTIATIDV---DGKKI-----QVLPKDFQLDPVKDFPVHVDFLRIGKDTE 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ VDVPV F + PG+K+GG L +R +++ CPA I I VD++ DIGD + +S
Sbjct: 104 VNVDVPVHFINEDKSPGIKRGGVLNIVRHEVEFHCPANAIPEFITVDLTGADIGDSIHIS 163
Query: 207 DIEVHPSWKLLSKNEKMPLCKISATKLENP 236
+ + K + + + I+ + P
Sbjct: 164 AVTLPAGVKPVISDRDFTIATIAGSSAMKP 193
>gi|431805518|ref|YP_007232419.1| 50S ribosomal protein L25 [Liberibacter crescens BT-1]
gi|430799493|gb|AGA64164.1| LSU ribosomal protein L25p [Liberibacter crescens BT-1]
Length = 200
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 98/215 (45%), Gaps = 22/215 (10%)
Query: 26 YHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
Y+ + A R G S R + IPAV++ D++ P+ + + E
Sbjct: 6 YYELDAKHRGKVGKGSSRELRRKNLIPAVIYG--------DKKPPTSISLSTRE------ 51
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
I+K + F +T + I G+ VL VLP + T I+++ F+ + +
Sbjct: 52 IVKRLNNGGFMTTILTVNIE---GNKVL-----VLPKSYQLNPVTDSIIHVDFLRISENS 103
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
++ V VP+ F + PG+K+ G L + ++ CP +I I VD+S+L I D + +
Sbjct: 104 KVSVQVPIHFINEDKSPGIKQSGILNIVCHEIELRCPTNNIPNFITVDLSSLKISDNIHI 163
Query: 206 SDIEVHPSWKLLSKNEKMPLCKISATKLENPEPAV 240
SDIE+ +S++ ++ T E EP V
Sbjct: 164 SDIELPNDVSPVSQDNFTIATIVAPTSEELEEPTV 198
>gi|359789667|ref|ZP_09292603.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium
alhagi CCNWXJ12-2]
gi|359254464|gb|EHK57472.1| 50S ribosomal protein L25/general stress protein Ctc [Mesorhizobium
alhagi CCNWXJ12-2]
Length = 282
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 95/210 (45%), Gaps = 22/210 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G++PAV++ D++ P ++ K I+
Sbjct: 75 YELKAETREQVGKGSAREVRRNGKVPAVIYG--------DKQPP---LAIALSYKDIYY- 122
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T + + G V +VLP D +++ F+ TE
Sbjct: 123 --KIHGGGFLTTIATIDV---GGKKV-----QVLPKDYQLDPVRDFPMHVDFLRIGKDTE 172
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V+VPV F E PG+K+GG L +R +++ CPA I I +D++ DIGD + +S
Sbjct: 173 VNVNVPVHFINEEKSPGIKRGGVLNIVRHEVEFHCPANAIPDSITIDLTGTDIGDSIHIS 232
Query: 207 DIEVHPSWKLLSKNEKMPLCKISATKLENP 236
+++ K + + + ++++ P
Sbjct: 233 AVKLPAGVKPVISDRDFTIATVASSSAMKP 262
>gi|383640040|ref|ZP_09952446.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
elodea ATCC 31461]
Length = 199
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 26/181 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G S R +GR+PAV++ +++ P+ + +++ +L
Sbjct: 6 TLSAETRDRAGKGASRALRREGRVPAVIYG--------NKQDPASIHV---NERELQKLL 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ FF S ++++ + L V D T R L++ F+ + +
Sbjct: 55 NTGH--FFNSV-------------IMVNGERTLAKDVAFDVVTDRPLHVDFLRISEHATV 99
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V+VP+VF E PGLK+GG L +R L+ + A I +IE+ + L++GD + +S
Sbjct: 100 HVEVPIVFVDEELAPGLKRGGVLNIVRHELELVVDAAEIPEQIEISLKGLEVGDSLHISA 159
Query: 208 I 208
+
Sbjct: 160 V 160
>gi|254293130|ref|YP_003059153.1| 50S ribosomal protein L25/general stress protein Ctc [Hirschia
baltica ATCC 49814]
gi|254041661|gb|ACT58456.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Hirschia
baltica ATCC 49814]
Length = 209
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 88/177 (49%), Gaps = 22/177 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE TG S + R + R+PA+++ + +P +S +R +I LK++
Sbjct: 12 RERTGKGGSRQARRENRVPAILYG--------GKEAPVS---ISLDRIEI---LKALNTG 57
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F S ++ + + D ++ H E ++L V D +KV+VPV
Sbjct: 58 KFLSNLVEIEHKGKKQFVIPQD------VQFHPVTEVALHVDLYRVKEDQ--LVKVEVPV 109
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
F G + PG+K+GG L +R +++ PA HI + DVS+LDIGD V +S+IE+
Sbjct: 110 HFTGEDVSPGIKRGGSLNIVRHTVELEVPAGHIPEFLTGDVSSLDIGDNVKISNIEL 166
>gi|91978462|ref|YP_571121.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris BisB5]
gi|123721572|sp|Q131L9.1|RL25_RHOPS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91684918|gb|ABE41220.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisB5]
Length = 234
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 112 VLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGY 169
V+LD K V+P H D +++ F+ G ++V VP+ KG+ES PG+K+GG
Sbjct: 66 VVLDGKKHRVIPRDYHLDPVKDFPIHVDFLRLGAGATIRVSVPLHLKGLESAPGVKRGGT 125
Query: 170 LKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ ++ PAE I IE DVS LDIG + +SDI + K +S+ +
Sbjct: 126 FNIVTHTVDLEAPAESIPQFIEADVSTLDIGVSLHLSDIALPNGVKSVSRED 177
>gi|378826775|ref|YP_005189507.1| 50S ribosomal protein L25 [Sinorhizobium fredii HH103]
gi|365179827|emb|CCE96682.1| 50S ribosomal protein L25 [Sinorhizobium fredii HH103]
Length = 203
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 88/187 (47%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A RE G S R G IPAV++ D+++P + + E
Sbjct: 2 SQTYELKAETRERVGKGSSRELRRNGLIPAVIYG--------DKQAPLSITLSTKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
+ + F +T + + +G + +VLP D +++ F+
Sbjct: 50 --VTMKIHAGGFMTTVATIDV---NGEKI-----RVLPKDYQLDPVRDFTMHVDFLRVSK 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G+++ V VPV F+ E PGLK+GG L +R ++ A++I + VD+S L IGD V
Sbjct: 100 GSQVSVQVPVHFENEEKSPGLKQGGTLNIVRHEVELNVSADNIPEFLSVDLSGLKIGDTV 159
Query: 204 FMSDIEV 210
+SD+++
Sbjct: 160 HISDVKL 166
>gi|13472406|ref|NP_103973.1| 50S ribosomal protein L25 [Mesorhizobium loti MAFF303099]
gi|71153162|sp|Q98HV7.1|RL25_RHILO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|14023152|dbj|BAB49759.1| 50S ribosomal protein L25 [Mesorhizobium loti MAFF303099]
Length = 213
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G++PAV++ D++ P + + I
Sbjct: 6 YELKAEAREQVGKGSARAVRRNGKVPAVIYG--------DKQPPLAIALTYKD------I 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADD 143
+ F +T + + G VL ++ P+K VH D F+
Sbjct: 52 YYKIHGGGFLTTIATIDVD-GKKIQVLPKDFQLDPVKDFPVHVD----------FLRIGK 100
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
TE+ VDVPV F + PG+K+GG L +R +++ CPA I I +D++ +IGD +
Sbjct: 101 DTEVNVDVPVHFINEDKSPGIKRGGVLNIVRHEVEFHCPANAIPEFITIDLTGTNIGDSI 160
Query: 204 FMSDIEVHPSWKLLSKNEKMPLCKISATKLENPE 237
+S +++ K + + + I+ + PE
Sbjct: 161 HISAVQLPAGVKPVISDRDFTIATIAGSSAMKPE 194
>gi|39937416|ref|NP_949692.1| 50S ribosomal protein L25 [Rhodopseudomonas palustris CGA009]
gi|192293199|ref|YP_001993804.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris TIE-1]
gi|68053168|sp|Q6N1P8.3|RL25_RHOPA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC; AltName: Full=RRP-L25
gi|226736356|sp|B3Q7X4.1|RL25_RHOPT RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|39651275|emb|CAE29797.1| putative 50S ribosomal protein L25 [Rhodopseudomonas palustris
CGA009]
gi|192286948|gb|ACF03329.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodopseudomonas palustris TIE-1]
Length = 230
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 112 VLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGY 169
V+LD K V+P H D +++ F+ G ++V VP+ KG+E PG+K+GG
Sbjct: 66 VVLDGKKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLKGLEVAPGVKRGGT 125
Query: 170 LKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ +++ PAE+I IE DVS LDIG + +SDI + K +S+++
Sbjct: 126 FNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKSVSRDD 177
>gi|86751268|ref|YP_487764.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris HaA2]
gi|109893387|sp|Q2ISF7.1|RL25_RHOP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|86574296|gb|ABD08853.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris HaA2]
Length = 240
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 102 LQIRAG----SGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVF 155
L+I+AG + V+LD K V+P H D +++ F+ +G +++ VP+
Sbjct: 52 LRIQAGRFLTTIFDVVLDGQKHRVIPRDYHLDPVKDFPVHVDFLRLGEGATIRISVPLHL 111
Query: 156 KGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWK 215
KG+ES PG+K+GG + ++ PA+ I IE DVS LDIG + +SDI + K
Sbjct: 112 KGLESAPGVKRGGTFNIVTHTVDLEAPADAIPQFIEADVSTLDIGVSLHLSDIALPKGVK 171
Query: 216 LLSKNE 221
+S+ +
Sbjct: 172 SVSRED 177
>gi|67458744|ref|YP_246368.1| 50S ribosomal protein L25 [Rickettsia felis URRWXCal2]
gi|75536799|sp|Q4UMK5.1|RL25_RICFE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|67004277|gb|AAY61203.1| 50S ribosomal protein L25 [Rickettsia felis URRWXCal2]
Length = 203
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G+ S R +GR+PA+++ ++P +S E K+I +
Sbjct: 7 LEAKSRTEFGTGASRALRREGRVPAIIYGAG--------KTPVS---ISLEEKEITKYYR 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I KVLP V T + ++ FV+ ++ T+ K
Sbjct: 56 K---PAFISQLINLTIDK--------KKYKVLPKAVELHPVTDIVRHVDFVFLEEKTQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VPVV++G E G+K+GGY ++ + LC +I + +DV+N+ I + S I
Sbjct: 104 MEVPVVYEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKI 163
Query: 209 EVHPSWKLLSKNE 221
E+ +K E
Sbjct: 164 ELPKGCSFTTKKE 176
>gi|433773544|ref|YP_007304011.1| ribosomal protein L25, Ctc-form [Mesorhizobium australicum WSM2073]
gi|433665559|gb|AGB44635.1| ribosomal protein L25, Ctc-form [Mesorhizobium australicum WSM2073]
Length = 213
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 91/205 (44%), Gaps = 22/205 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G++PAV++ DR+ P + + I
Sbjct: 6 YELKAEAREQVGKGSARAVRRNGKVPAVIYG--------DRQPPLAIALTYKD------I 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T + + G + +VLP D +++ F+ TE
Sbjct: 52 YYKIHGGGFLTTIATIDV---DGKKI-----QVLPKDFQLDPVKDFPVHVDFLRIGKDTE 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ VDVPV F + PG+K+GG L +R +++ CPA I I VD++ DIGD + +S
Sbjct: 104 VNVDVPVHFINEDKSPGIKRGGVLNIVRHEVEFHCPANAIPEFITVDLTGADIGDSIHIS 163
Query: 207 DIEVHPSWKLLSKNEKMPLCKISAT 231
+++ K + + + ++ +
Sbjct: 164 SVKLPAGVKPVISDRDFTIATVAGS 188
>gi|393774509|ref|ZP_10362871.1| 50S ribosomal protein L25 [Novosphingobium sp. Rr 2-17]
gi|392719992|gb|EIZ77495.1| 50S ribosomal protein L25 [Novosphingobium sp. Rr 2-17]
Length = 202
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 22/175 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G S R GR+PAVV+ S + E K++ + +
Sbjct: 12 RERAGKGASRELRRTGRVPAVVYG-----------GKSEPLAIHLEEKEL---ARQLGTG 57
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ++ ++I + P V + R L+ F+ G + V+VPV
Sbjct: 58 HFFNSIIEIEIDG--------KKHRTQPKDVAFHPVSARPLHADFLRIAKGATVHVNVPV 109
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VF E PGLK+GG L +R L+ +C AE I +I +DV+ D+G+ + S +
Sbjct: 110 VFINEELSPGLKRGGVLNIVRHDLELVCDAEKIPHEIAIDVTGFDLGESIHFSHV 164
>gi|42520074|ref|NP_965989.1| 50S ribosomal protein L25 [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|225629937|ref|YP_002726728.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia sp.
wRi]
gi|71153674|sp|Q73II9.1|RL25_WOLPM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801068|sp|C0R595.1|RL25_WOLWR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|42409811|gb|AAS13923.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila melanogaster]
gi|225591918|gb|ACN94937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia sp.
wRi]
Length = 203
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 39/220 (17%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A R+ T ++ R +G IP +++ + + N L+ K+
Sbjct: 8 TINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVN-----------LTLSAKE----- 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLD---SGK-----VLPIKVHRDEETGRILNLVFV 139
F Q ++GS S+ L++ SGK V I++H ++T + ++ F
Sbjct: 52 ------------FTKQYKSGSLSAHLIELNISGKKEYALVRDIQLHVVKDT--VQHVDFQ 97
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
+ D G+E+K+D+P+ F PG+K GG L + S+ C + I IEVD+S I
Sbjct: 98 FVDKGSEIKIDIPLSFVNESKAPGIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMI 157
Query: 200 GDRVFMSDIEVHPSWKLLS-KNEKMPLCKISATKLENPEP 238
G + ++D+++ K ++ + E + ISA + EP
Sbjct: 158 GQSIHINDVKLPEGVKFVAHEEENFTIVTISAADSDVEEP 197
>gi|225677074|ref|ZP_03788079.1| ribosomal 5S rRNA E-loop binding protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
gi|225590896|gb|EEH12118.1| ribosomal 5S rRNA E-loop binding protein [Wolbachia endosymbiont of
Muscidifurax uniraptor]
Length = 203
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 90/183 (49%), Gaps = 24/183 (13%)
Query: 78 TERKQIHSILKSVELP-------------FFCSTTFPLQIRAGSGSSVLLD---SGK--- 118
T+ K +HS+ K +P + F Q ++GS S+ L++ SGK
Sbjct: 17 TKTKAVHSLRKKGNIPGIIYGKGHDNVNLTLSAKEFTKQYKSGSLSAHLIELNISGKKEY 76
Query: 119 --VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTS 176
V I++H ++T + ++ F + D G+E+K+D+P+ F PG+K GG L + S
Sbjct: 77 ALVRDIQLHVVKDT--VQHVDFQFVDKGSEIKIDIPLSFVNESKAPGIKLGGVLNVLCRS 134
Query: 177 LKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS-KNEKMPLCKISATKLEN 235
+ C + I IEVD+S IG + ++D+++ K ++ + E + ISA +
Sbjct: 135 IAVKCSPDKIPQVIEVDLSGKMIGQSIHINDVKLPEGVKFVAHEEENFTIVTISAADSDV 194
Query: 236 PEP 238
EP
Sbjct: 195 EEP 197
>gi|254500889|ref|ZP_05113040.1| ribosomal protein L25, Ctc-form [Labrenzia alexandrii DFL-11]
gi|222436960|gb|EEE43639.1| ribosomal protein L25, Ctc-form [Labrenzia alexandrii DFL-11]
Length = 176
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 133 ILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEV 192
+L++ F+ T L VD+PV F E+CPGLKKGG L +R +++ + PA I +
Sbjct: 58 VLHVDFLRVSGNTTLTVDIPVTFINEETCPGLKKGGMLNVVRHTVELIVPANAIPETLVF 117
Query: 193 DVSNLDIGDRVFMS 206
D++ +DIGD + +S
Sbjct: 118 DLAKVDIGDTLHIS 131
>gi|402825821|ref|ZP_10875074.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. LH128]
gi|402260639|gb|EJU10749.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. LH128]
Length = 202
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%)
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIE 191
R L+ F+ G + V+VPVVF+ E PGLK+GG L +R L+ +C AE I +I
Sbjct: 88 RPLHADFLRLAKGATVHVNVPVVFENEELSPGLKRGGVLNIVRHDLELVCDAEKIPHEIT 147
Query: 192 VDVSNLDIGDRVFMSDIEV 210
+DV+ D+G+ + +S +++
Sbjct: 148 IDVTGFDVGESIHISHVKL 166
>gi|337266802|ref|YP_004610857.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium
opportunistum WSM2075]
gi|336027112|gb|AEH86763.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium
opportunistum WSM2075]
Length = 212
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G++PAV++ D++ P + + I
Sbjct: 6 YELKAEAREQVGKGSARAVRRNGKVPAVIYG--------DKQPPLAIALTYKD------I 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADD 143
+ F +T + + G VL ++ P+K VH D F+
Sbjct: 52 YYKIHGGGFLTTIATIDVD-GKKIQVLPKDFQLDPVKDFPVHVD----------FLRIGK 100
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
TE+ VDVPV F + PG+K+GG L +R +++ CPA I I +D++ +IGD +
Sbjct: 101 DTEVNVDVPVHFINEDKSPGIKRGGVLNIVRHEVEFHCPANAIPEFITIDLTGTNIGDSI 160
Query: 204 FMSDIEVHPSWKLLSKNEKMPLCKISATKLENPE 237
+S +++ K + + + I+ + PE
Sbjct: 161 HISAVKLPAGVKPVISDRDFTVATIAGSSAMKPE 194
>gi|91762774|ref|ZP_01264739.1| ribosomal 5S rRNA E-loop binding protein [Candidatus Pelagibacter
ubique HTCC1002]
gi|91718576|gb|EAS85226.1| ribosomal 5S rRNA E-loop binding protein [Candidatus Pelagibacter
ubique HTCC1002]
Length = 228
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
RS G IP +++ P + Q ++ +K + S+ ++ F S L +
Sbjct: 21 RSAGNIPGIIYG-----------GPDQNQKVTVLKKTLKSL---IDKGSFLSNIITLNLD 66
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
G +VL + + V DE T ++ F+ G +++++VPVVF E+ PGLK
Sbjct: 67 -GKPQNVLP---REITYNVISDEPT----HIDFLRVVPGVKIRIEVPVVFINHETSPGLK 118
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
+GG L +R ++ CP+E I I +D+ +DIG+ +S +++
Sbjct: 119 RGGVLNIVRRKIELKCPSEKIPSAITIDLGGVDIGESFKISSVKLE 164
>gi|78484738|ref|YP_390663.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thiomicrospira crunogena XCL-2]
gi|109893402|sp|Q31IN4.1|RL25_THICR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|78363024|gb|ABB40989.1| LSU ribosomal protein L25P [Thiomicrospira crunogena XCL-2]
Length = 193
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R G S R R G++PA+++ D+ D +S ++ + QI LK +++
Sbjct: 10 RTEEGKGASRRLRHAGKVPAIIYGGDV-----DAKS------IALKSNQIERALK-LDVD 57
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+ S L+ G+G D+ + + R TG I ++ F A D + VP+
Sbjct: 58 LYNSV-LTLE---GAG-----DAENCIIKDLQRHPATGFITHIDFQRASDKAMVTKRVPL 108
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
FKG ES PG+K GG + ++T+++ C A+ + I+VDVS L+ G + +S + +
Sbjct: 109 KFKGKESSPGVKMGGLMSFMQTTVEVSCLAKDLPTAIDVDVSELEAGTNLRLSQLTLPKG 168
Query: 214 WKL 216
KL
Sbjct: 169 VKL 171
>gi|71082803|ref|YP_265522.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus
Pelagibacter ubique HTCC1062]
gi|109893377|sp|Q4FPH0.1|RL25_PELUB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71061916|gb|AAZ20919.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus
Pelagibacter ubique HTCC1062]
Length = 228
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
RS G IP +++ P + Q ++ +K + S+ ++ F S L +
Sbjct: 21 RSAGNIPGIIYG-----------GPDQNQKVTVLKKTLKSL---IDKGSFLSNIITLNLD 66
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
G +VL + + V DE T ++ F+ G +++++VPVVF E+ PGLK
Sbjct: 67 -GKPQNVL---PREITYNVISDEPT----HIDFLRVVPGVKIRIEVPVVFINHETSPGLK 118
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
+GG L +R ++ CP+E I I +D+ +DIG+ +S +++
Sbjct: 119 RGGVLNIVRRKIELKCPSEKIPSAITIDLDGVDIGESFKISSVKLE 164
>gi|405354022|ref|ZP_11023431.1| LSU ribosomal protein L25p [Chondromyces apiculatus DSM 436]
gi|397092713|gb|EJJ23462.1| LSU ribosomal protein L25p [Myxococcus sp. (contaminant ex DSM
436)]
Length = 220
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 24/207 (11%)
Query: 23 TSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQ 82
T+ T++A PRE +G V+ R R+QG IPAVV+ + L + +S + K
Sbjct: 2 TANTSTLEAQPREGSGKGVARRLRAQGLIPAVVYGKHL----------EKPVHISVDPK- 50
Query: 83 IHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD 142
++ +++ P +T +++ AG VLL ++ P+ T IL+ F+
Sbjct: 51 --AVRQAINTPHKFNTLIKIKV-AGGDREVLLKDYQMEPV-------TRAILHADFLDVR 100
Query: 143 DGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDR 202
++KV+VP+V G G+ GG L R L+ I +IEVDV+ + I +
Sbjct: 101 ADEQVKVNVPLVLTG--RAQGVADGGLLTQARRELEVWSLPAAIPERIEVDVTPMKITEV 158
Query: 203 VFMSDIEVHPSWKLLSKNEKMPLCKIS 229
+ ++D+++ P+ + N L IS
Sbjct: 159 LHINDVKL-PAGVSVKTNVNYTLAVIS 184
>gi|94498282|ref|ZP_01304842.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingomonas
sp. SKA58]
gi|94422284|gb|EAT07325.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sphingomonas
sp. SKA58]
Length = 208
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 91/203 (44%), Gaps = 22/203 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G S R +GR+PAV++ + Q + E K + +L
Sbjct: 6 TLSAEARDRAGKGASRALRREGRVPAVIYGNN-----------EEPQSIHVEEKLLSKLL 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ FF S +++ +G +V + LP V T R L+ F+ + +
Sbjct: 55 GTGH--FFNSVVM-VEV---NGKAV-----RTLPKDVAFHPVTDRPLHADFLRVSEHATV 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V+VPV F+ ++ PGLKKGG L +R ++ + A +I + VD+ ++GD + +S
Sbjct: 104 NVNVPVRFENEDAAPGLKKGGVLNVVRHDVELIVDAANIPEDVVVDLKGFEVGDSIHISA 163
Query: 208 IEVHPSWKLLSKNEKMPLCKISA 230
+ + K + + I A
Sbjct: 164 VTLPKGAKTAIDDRDFTIATIVA 186
>gi|402771718|ref|YP_006591255.1| 50S ribosomal protein L25 [Methylocystis sp. SC2]
gi|401773738|emb|CCJ06604.1| 50S ribosomal protein L25 [Methylocystis sp. SC2]
Length = 216
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R TG + R +GRIPAV++ Q LS E+K + ++
Sbjct: 12 LAATVRSGTGKGAARSVRREGRIPAVLYGGG-----------EAPQPLSLEKKSLSQLIF 60
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F +T F L I + +P D +++ F+ G+ L+
Sbjct: 61 AGH---FLTTIFELDIDG--------KKERAIPRDYQLDVIKDTPMHVDFLRLKPGSRLR 109
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V VPV F E+ PG+K+GG L + +++ PA++I I D++ +D D + +S I
Sbjct: 110 VQVPVHFTNQEAAPGIKRGGALNIVYHTVEMWVPADNIPEAITADLTGMDFNDSLHISAI 169
>gi|88607427|ref|YP_505816.1| 50S ribosomal protein L25/general stress protein Ctc [Anaplasma
phagocytophilum HZ]
gi|109893343|sp|Q2GII5.1|RL25_ANAPZ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|88598490|gb|ABD43960.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Anaplasma
phagocytophilum HZ]
Length = 211
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A RE G+ + R++G IPAV++ ++ R P ++ Q+ + K
Sbjct: 9 VDASVRERCGTGSARALRARGLIPAVIYGKN--------RDP-----INISLSQVDFLKK 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I + D + + +G I ++ F + D E+K
Sbjct: 56 CRTFPIF-SKLIELCIGEKKEYVITKD--------IQKHPVSGAIAHVDFQFVDQDAEMK 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VP+VF + C G+K+GG + + SL C HI +EVD+ ++ IG + +SD+
Sbjct: 107 MEVPLVFLNEQKCVGVKRGGVINILHRSLIIRCSPHHIPKSLEVDLIDVAIGHSLHVSDL 166
Query: 209 EVHPSWKLLSKNEKMPLCKISAT 231
++ + ++ K E + + A+
Sbjct: 167 KLPSTINVVMKEEDPVIATVVAS 189
>gi|383501477|ref|YP_005414836.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
australis str. Cutlack]
gi|378932488|gb|AFC70993.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
australis str. Cutlack]
Length = 203
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A PR G+ + R +GR+PA+++ K S K+I RK
Sbjct: 7 LEAKPRTEFGTGAARALRREGRVPAIIYGAG---KTPVSISLKEKEITKYYRK------- 56
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S + I KVLP V T + ++ FV+ + T+ K
Sbjct: 57 ----PAFISQLINVTIDK--------KQYKVLPKAVELHPVTDIVRHVDFVFLEAKTQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VPVV++G E G+K+GGY ++ + LC +I + +DV+N+ I + S I
Sbjct: 104 MEVPVVYEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKI 163
Query: 209 EVHPSWKLLSKNE 221
E+ ++K E
Sbjct: 164 ELPKGCSFVTKKE 176
>gi|426400541|ref|YP_007019513.1| 50S ribosomal protein L25 [Candidatus Endolissoclinum patella L2]
gi|425857209|gb|AFX98245.1| ribosomal protein L25, Ctc-form [Candidatus Endolissoclinum patella
L2]
Length = 217
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A RE G + R QG +PA+++ + +++P Q+L R+++ IL
Sbjct: 19 LNASVRERLGKGSARAARRQGFVPAIIYGE--------KKTPIAVQVL---RRELDKILN 67
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L++ ++ +VLP + R + N+ F+ L
Sbjct: 68 R---PGFFSRLIFLKVGT--------ENYRVLPRDLQRHPVSDLPWNIDFLRVSASAVLT 116
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V VP+ F PG+K GG L +R S++ C E+I K+ +D+S+ +G+ +++S I
Sbjct: 117 VAVPIEFINKNISPGVKSGGVLNVMRHSIEVYCQVENIPDKLTIDLSDAKLGESIYVSSI 176
Query: 209 EV 210
+
Sbjct: 177 SL 178
>gi|312114466|ref|YP_004012062.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodomicrobium vannielii ATCC 17100]
gi|311219595|gb|ADP70963.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Rhodomicrobium vannielii ATCC 17100]
Length = 205
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 86/182 (47%), Gaps = 22/182 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A RE TG + R++ +P +V+ + + P+ + + + +
Sbjct: 7 LKAQAREGTGKLANRALRAKKLVPGIVYGGE--------KGPANVAL------EYRHVWQ 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F ST + L I +V+P V D +++ F+ + ++
Sbjct: 53 HYQTGHFLSTVYLLDIDG--------KKERVIPRDVQVDPVRDFPIHVDFLRVSKSSRIE 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V++PV F E+ PGLK+GG L +R +++ CPA+ I I VD++ DIGD + +S +
Sbjct: 105 VEIPVHFVNEEASPGLKRGGALNIVRHAVELSCPADSIPEFITVDLTGYDIGDSIHISAV 164
Query: 209 EV 210
++
Sbjct: 165 KL 166
>gi|254780418|ref|YP_003064831.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Liberibacter asiaticus str. psy62]
gi|254040095|gb|ACT56891.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Liberibacter asiaticus str. psy62]
Length = 191
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 22/182 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A+ R+ G + R G+IPA+++ N P ++ K I L
Sbjct: 8 LSAVMRDKVGKGSARLLRKNGQIPAIIYG------NMSDPKP-----IALSAKDISKRLY 56
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
S F +T L I G ++ V+P D + +++ F+ +G+ +
Sbjct: 57 SKN---FMTTILTLDI----GKELV----HVIPKDYQLDPVSDILIHADFLQVSEGSTVT 105
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V VPV F PG+K+GG L + + LCPA +I I VD+++L IGD + M DI
Sbjct: 106 VHVPVRFINENKSPGIKQGGKLNVVCHEVSLLCPANNIPDSITVDLNDLKIGDSIHMEDI 165
Query: 209 EV 210
+
Sbjct: 166 RL 167
>gi|15604456|ref|NP_220974.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Madrid E]
gi|383487426|ref|YP_005405106.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. GvV257]
gi|383488005|ref|YP_005405684.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Chernikova]
gi|383488850|ref|YP_005406528.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Katsinyian]
gi|383489690|ref|YP_005407367.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Dachau]
gi|383499830|ref|YP_005413191.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. BuV67-CWPP]
gi|383500667|ref|YP_005414027.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. RpGvF24]
gi|386082466|ref|YP_005999043.1| 50S ribosomal protein L25 [Rickettsia prowazekii str. Rp22]
gi|6225985|sp|Q9ZCV3.1|RL25_RICPR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|3861150|emb|CAA15050.1| PROBABLE 50S RIBOSOMAL PROTEIN L25 (rplY) [Rickettsia prowazekii
str. Madrid E]
gi|292572230|gb|ADE30145.1| 50S ribosomal protein L25 [Rickettsia prowazekii str. Rp22]
gi|380757791|gb|AFE53028.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. GvV257]
gi|380758364|gb|AFE53600.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. RpGvF24]
gi|380760884|gb|AFE49406.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Chernikova]
gi|380761729|gb|AFE50250.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Katsinyian]
gi|380762576|gb|AFE51096.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. BuV67-CWPP]
gi|380763413|gb|AFE51932.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
prowazekii str. Dachau]
Length = 203
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G+ + R +GR+PA+++ K S K+I RK
Sbjct: 7 LEAKSRTEFGTGAARALRREGRVPAIIYGAG---KTPISISLKEKEITKYYRK------- 56
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I KVLP V T + ++ FV+ + T+ K
Sbjct: 57 ----PAFISQLINLTIDK--------KQYKVLPKAVELHPVTDIVRHVDFVFLEAKTQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VP+V++G E G+K+GGY I+ + LC +I + +DV+N+ IG + S +
Sbjct: 104 MEVPIVYEGKERALGVKRGGYFNIIKRRVILLCDVNNIPRNVTIDVTNMPIGTSLKSSQV 163
Query: 209 EVHPSWKLLSKNE 221
E+ ++K E
Sbjct: 164 ELPKGCSFITKKE 176
>gi|315498173|ref|YP_004086977.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Asticcacaulis
excentricus CB 48]
gi|315416185|gb|ADU12826.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Asticcacaulis
excentricus CB 48]
Length = 195
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 92/207 (44%), Gaps = 25/207 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI-LKSVEL 92
RE TG+ + R++G++P +++ D + ++ L T + H + LK
Sbjct: 11 RERTGTGGARATRNEGKVPGILYGGDKAPVAIAVKLNEFRKALYTGKLAGHLVTLK---- 66
Query: 93 PFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVP 152
+ T + +A +D V + VH D D+ +K++VP
Sbjct: 67 --YGEETQKVIAKA-------IDFHPVTDVPVHFD----------LYRVDETQTIKINVP 107
Query: 153 VVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
V FK E+ PG+KKGG L L+ PA HI + VD+S LDIG V + D+ + P
Sbjct: 108 VHFKNHEASPGIKKGGALTVAFHELEIQVPAGHIPEDVVVDLSGLDIGASVHVGDLSL-P 166
Query: 213 SWKLLSKNEKMPLCKISATKLENPEPA 239
S + + + I+A+ E E A
Sbjct: 167 SDVTAVPGKDVVIASITASAAEKSEEA 193
>gi|407773385|ref|ZP_11120686.1| 50S ribosomal protein L25/general stress protein Ctc [Thalassospira
profundimaris WP0211]
gi|407283849|gb|EKF09377.1| 50S ribosomal protein L25/general stress protein Ctc [Thalassospira
profundimaris WP0211]
Length = 209
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 89/205 (43%), Gaps = 26/205 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHS 85
I A RE G + R G +P V++ Q+ + D R
Sbjct: 5 VINAEIRERAGKGAARAVRRAGMVPGVIYGAKQEAVLFQVDPRP---------------- 48
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ K + P F S +Q+ + +VLP V D+ + IL++ F+ G
Sbjct: 49 LWKLLHQPGFYSHVLTVQVGK--------EKYEVLPRDVQFDKVSDEILHVDFLRFAKGQ 100
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ V+VPV F E PGLKKGG L +R ++ LC I ++ D++ +++GD + +
Sbjct: 101 TINVEVPVRFVNEEKSPGLKKGGVLNIVRHDVEVLCAPSAIPEELVFDLTGVEVGDSIHI 160
Query: 206 SDIEVHPSWKLLSKNEKMPLCKISA 230
S I++ +L + + ++A
Sbjct: 161 SAIKLPKGVELTITDRDFTVATVAA 185
>gi|288958834|ref|YP_003449175.1| 50S ribosomal protein L25 [Azospirillum sp. B510]
gi|288911142|dbj|BAI72631.1| large subunit ribosomal protein L25 [Azospirillum sp. B510]
Length = 198
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 22/177 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G + + R GRIPAV++ +++P +S E+ + +L P
Sbjct: 12 RERAGKGTARQTRRDGRIPAVIYG--------GKQAPV---TISLEKFEFTRVLHQ---P 57
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F + F + + + +VLP V + L++ F+ T + V VPV
Sbjct: 58 GFFTHLFDVTVDG--------TAHRVLPRDVQFHPVSDIPLHVDFLRVSSDTRINVQVPV 109
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
F E GLK+GG L +R L+ CPA++I I + D+GD + +S +++
Sbjct: 110 EFADQEKSAGLKRGGVLNIVRHELELSCPADNIPEHITISCEGFDVGDSIHISAVKL 166
>gi|114569308|ref|YP_755988.1| 50S ribosomal protein L25 [Maricaulis maris MCS10]
gi|122316567|sp|Q0ARN7.1|RL25_MARMM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|114339770|gb|ABI65050.1| LSU ribosomal protein L25P [Maricaulis maris MCS10]
Length = 215
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIE 191
+ +++ D+ T++ V+V V F ++CP LK+GG L +R ++ LCPA I +E
Sbjct: 88 KAMHIDLYRVDEDTKINVNVAVNFTNEDACPALKRGGVLNIVRHDVELLCPAGSIPESVE 147
Query: 192 VDVSNLDIGDRVFMSDIEV 210
D++ LDIGD + +S I++
Sbjct: 148 ADLTGLDIGDSLHISAIKL 166
>gi|148270294|ref|YP_001244754.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga
petrophila RKU-1]
gi|166223728|sp|A5ILV5.1|RL25_THEP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|147735838|gb|ABQ47178.1| LSU ribosomal protein L25P [Thermotoga petrophila RKU-1]
Length = 214
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 100/197 (50%), Gaps = 21/197 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+++A RE G R + R R G +PAVV+ P+ + I ++ S+L
Sbjct: 3 SLEARVREVKGKREARRLRRNGEVPAVVYG------------PATEPIPVKIKR---SVL 47
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK-VHRDEETGRILNLVFVWADDGTE 146
+ V +T L I+ G++V S K + +K + RD+ + +++L F G
Sbjct: 48 EKVFHTISEATPIQLIIKDDQGNTV---SEKTVFLKMIQRDKVSETVVHLDFYEPTKGHR 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++++VP K V G++KGG+L+ + +++ +IEVDVS+LD+GD ++
Sbjct: 105 MRINVP--LKVVGKPVGVEKGGFLEVFHEEIPVETDPDNVPQEIEVDVSSLDLGDVIYAR 162
Query: 207 DIEVHPSWKLLSKNEKM 223
D+++ K L +E++
Sbjct: 163 DLKLPEGVKCLLGDEEV 179
>gi|83859404|ref|ZP_00952925.1| ribosomal 5S rRNA E-loop binding protein [Oceanicaulis sp.
HTCC2633]
gi|83852851|gb|EAP90704.1| ribosomal 5S rRNA E-loop binding protein [Oceanicaulis alexandrii
HTCC2633]
Length = 210
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 82/175 (46%), Gaps = 22/175 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE TG+ + R G +P V++ D + P + + E ++K++
Sbjct: 11 RERTGTGGARETRRNGFVPGVLYGGD--------KGPVSIALKNNE------VIKAINSG 56
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F + + G SVL + P+ RDE +++ F D+ T + V+V V
Sbjct: 57 KFLAQMITID-HKGEKQSVLTRDVQFHPV---RDEP----VHIDFQRVDESTIITVEVTV 108
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
F E PGLK+GG L +R +++ PA I +I+VD+S DIGD + +S +
Sbjct: 109 HFHNDEKSPGLKRGGVLNVVRHAVEVNVPAGSIPDQIDVDLSGYDIGDSIHISAV 163
>gi|440227374|ref|YP_007334465.1| 50S ribosomal protein L25, Ctc-form [Rhizobium tropici CIAT 899]
gi|440038885|gb|AGB71919.1| 50S ribosomal protein L25, Ctc-form [Rhizobium tropici CIAT 899]
Length = 205
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPVSIALNTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T + + G + KVLP D L++ F+ T
Sbjct: 52 TKRIHAGGFLTTIATIDV---DGKKI-----KVLPKDYQLDPVRDFTLHVDFLRVSGNTA 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F+ E PGLK GG L +R ++ CPA+ I VD++ L GD + +S
Sbjct: 104 VTVEIPVHFENHEKSPGLKAGGVLNIVRHEVEVHCPADAIPEFFTVDLTGLKSGDSIHIS 163
Query: 207 DIEV 210
I++
Sbjct: 164 AIKL 167
>gi|406705753|ref|YP_006756106.1| 50S ribosomal protein L25 [alpha proteobacterium HIMB5]
gi|406651529|gb|AFS46929.1| LSU ribosomal protein L25P [alpha proteobacterium HIMB5]
Length = 237
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 22/166 (13%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R +G +PA+V+ ++N +S +K + S+ VE F S L I
Sbjct: 21 RKEGNVPAIVYGGKDNNEN-----------ISISKKTLKSL---VEKDNFYSNIISLNIN 66
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
+ + VLP +V + +++ F G ++++DVPV F E PGLK
Sbjct: 67 GKTQN--------VLPREVIYHIISDEPIHVDFQRVVPGVKIRIDVPVQFINQEKSPGLK 118
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
KGG L +R ++ CP+E I + +D+ +DIG+ +S I++
Sbjct: 119 KGGVLNIVRRKVELRCPSEKIPESLVIDLDGVDIGESFKISSIKLE 164
>gi|384084006|ref|ZP_09995181.1| 50S ribosomal protein L25 [Acidithiobacillus thiooxidans ATCC
19377]
Length = 202
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 88/181 (48%), Gaps = 22/181 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
I A+PRE G R S R R G +PAV++ + + +++L+ ER H I
Sbjct: 5 AIAAMPREENGRRASRRLRRTGMVPAVLYGDNKAAMGLSIEARLLRKLLADERAYTHVI- 63
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
++E P G ++++ D +++H +E +L++ F+ G +
Sbjct: 64 -TLEFP------------KGKETALIRD------LQMHPYKE--EVLHMDFMRVHAGETV 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
++ VP+ F +C G+K GG L T ++ P + + IEVD++NL+ G+ + +S
Sbjct: 103 RLHVPIHFLHENTCVGIKAGGVLHRALTDVEVEAPVDRLPEAIEVDIANLEKGESLHLSQ 162
Query: 208 I 208
I
Sbjct: 163 I 163
>gi|307944188|ref|ZP_07659529.1| ribosomal protein L25, Ctc-form [Roseibium sp. TrichSKD4]
gi|307772534|gb|EFO31754.1| ribosomal protein L25, Ctc-form [Roseibium sp. TrichSKD4]
Length = 207
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 28/186 (15%)
Query: 23 TSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDR--RSPSRKQILSTER 80
TSY ++A R+ G + R +G +PAV++ DK + P ++ L+ +
Sbjct: 3 TSY--ELKASARDRVGKGAARALRREGLLPAVIYG----DKKPAQPITIPVKETTLTLHK 56
Query: 81 KQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVW 140
+ + ++++ G V+ ++ P+ RD+ +L++ F+
Sbjct: 57 GGFLTHIGTIDID-------------GEKHQVIAKDYQLHPV---RDD----VLHVDFLR 96
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
T L VD+PV F E+CPGLKKGG L +R +++ PA I + D++ +DIG
Sbjct: 97 VSKNTTLTVDIPVTFINEETCPGLKKGGMLNVVRHTVELQVPANAIPETLVFDLAKVDIG 156
Query: 201 DRVFMS 206
D + +S
Sbjct: 157 DTLHIS 162
>gi|433614179|ref|YP_007190977.1| ribosomal protein L25, Ctc-form [Sinorhizobium meliloti GR4]
gi|429552369|gb|AGA07378.1| ribosomal protein L25, Ctc-form [Sinorhizobium meliloti GR4]
Length = 204
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R+ G S R G IPAV++ + P LST+
Sbjct: 2 SETYELKAETRDRVGKGSSRELRRNGLIPAVIYGD---------KQPPLSIALSTK---- 48
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
+ + F +T + + +G + +VLP D +++ F+
Sbjct: 49 -DVTMKIHAGGFMTTVATIDV---NGEKI-----RVLPKDYQLDPVRDFTMHVDFLRVSK 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G+++ V VPV F+ E PGLK+GG L +R ++ A++I + VD++ L IGD V
Sbjct: 100 GSQVSVQVPVHFENEEKSPGLKQGGALNIVRHEVELNVSADNIPESLTVDLTGLKIGDTV 159
Query: 204 FMSDIEV 210
+SD+++
Sbjct: 160 HISDVKL 166
>gi|222086595|ref|YP_002545129.1| 50S ribosomal protein L25 [Agrobacterium radiobacter K84]
gi|398381726|ref|ZP_10539832.1| ribosomal protein L25, Ctc-form [Rhizobium sp. AP16]
gi|221724043|gb|ACM27199.1| ribosomal protein L25, Ctc-form [Agrobacterium radiobacter K84]
gi|397718807|gb|EJK79388.1| ribosomal protein L25, Ctc-form [Rhizobium sp. AP16]
Length = 203
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPISITLNTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T + + G+ + KVLP D L++ F+ ++
Sbjct: 52 TKRIHAGGFLTTIATIDV---DGTKI-----KVLPKDYQLDPVRDFTLHIDFLRVSGNSQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F E PGLK GG L +R ++ CPA+ I VD+S L GD + +S
Sbjct: 104 VTVEIPVHFVNQEKSPGLKAGGVLNIVRHEVEVHCPADAIPEFFTVDLSGLKAGDSIHIS 163
Query: 207 DI 208
+
Sbjct: 164 HV 165
>gi|148653903|ref|YP_001280996.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter
sp. PRwf-1]
gi|172048580|sp|A5WHA5.1|RL25_PSYWF RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|148572987|gb|ABQ95046.1| LSU ribosomal protein L25P [Psychrobacter sp. PRwf-1]
Length = 224
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 23 TSYYHTIQAIPR--ECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTER 80
+ +T+ I R + G S R R Q +PA+++ + P+ I E
Sbjct: 2 SDILYTVNGITRTNDQQGKGASRRLRKQNLVPAIIYGGN--------EEPTAIAIKKNE- 52
Query: 81 KQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVW 140
+ K +E F S + + +V+ D + R G ++ F
Sbjct: 53 -----LWKLLENEAFFSNILTINLEGEEHLAVIKD--------LQRHPSKGFAMHADFQR 99
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
G ++ + +P+ F G E PG+K GG L ++ T ++ +C ++ +EVDVSNL+IG
Sbjct: 100 IVKGQKINMQIPLHFTGREEAPGIKAGGILSTLVTDIEIVCLPSNLPEFLEVDVSNLEIG 159
Query: 201 DRVFMSDIEV 210
+ + ++DI++
Sbjct: 160 ESLHLTDIKL 169
>gi|407973854|ref|ZP_11154765.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor indicus C115]
gi|407430914|gb|EKF43587.1| 50S ribosomal protein L25/general stress protein Ctc
[Nitratireductor indicus C115]
Length = 210
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 54/93 (58%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+VLP D L++ F+ GT + V+VPV F E+ PG+K+GG L +R +
Sbjct: 75 QVLPKDYQLDPVRDVPLHVDFLRIGKGTVVTVNVPVHFTNEEAAPGIKRGGVLNIVRHEV 134
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
++ CPA I IEVD++ DIGD + +S +++
Sbjct: 135 EFSCPAIAIPEFIEVDLTGSDIGDSIHISAVKL 167
>gi|338733705|ref|YP_004672178.1| 50S ribosomal protein L25 [Simkania negevensis Z]
gi|336483088|emb|CCB89687.1| 50S ribosomal protein L25 [Simkania negevensis Z]
Length = 185
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 85/178 (47%), Gaps = 19/178 (10%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R + IPAV++ P I++ + H+IL+ ++ + +T F L +
Sbjct: 20 RFRKDIPAVIYQNG---------KPGENAIVNGS--EFHTILRGLQKGYLPTTIFELDLD 68
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
+++ D I+ H T +IL+L F+ D + V VP+ F+G C G+K
Sbjct: 69 GKKSKAIVKD------IQYH--PTTYQILHLDFLLLSDDVPVDVKVPISFEGQADCVGIK 120
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKM 223
GG+L+ + ++ C + I +VDV +L IG + DIE+ + + L + +++
Sbjct: 121 LGGFLRPVIRHVRVRCLPKDIPTDFKVDVRSLAIGQEKRIRDIEMGDAIRTLVRPQEV 178
>gi|405382024|ref|ZP_11035846.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF142]
gi|397321512|gb|EJJ25928.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF142]
Length = 203
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P I + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGFIPAVIYG--------DKQAPVSIAINTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T + + KVLP D +++ F+ T+
Sbjct: 52 TKRIHAGGFMTTVATIDVDG--------KKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F E PGLK GG L +R ++ CPA+ I VD+S IGD + +S
Sbjct: 104 VTVEIPVHFVNEEKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFTVDLSGHKIGDSIHIS 163
Query: 207 DI 208
++
Sbjct: 164 EV 165
>gi|148554297|ref|YP_001261879.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
wittichii RW1]
gi|166223725|sp|A5V625.1|RL25_SPHWW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|148499487|gb|ABQ67741.1| LSU ribosomal protein L25P [Sphingomonas wittichii RW1]
Length = 207
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A RE G S R +GR+PAV++ + ++ P+ + E K + +L
Sbjct: 7 LSAEARERAGKGASRAIRREGRVPAVIYGE--------KQEPAS---IHVEEKVLMKLLH 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSG----KVLPIKVHRDEETGRILNLVFVWADDG 144
+ FF S V+LD G + LP V T R L++ F+ +
Sbjct: 56 TGH--FFNSV-------------VMLDVGGKKVRTLPKDVQFHPVTDRPLHVDFLRIGEH 100
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
T++ V+VPV FK E PGLK+GG L + L A I +I + + L++G+ +
Sbjct: 101 TKVNVNVPVHFKDEELSPGLKRGGVLNVVIHDLGLSVDAAEIPEEIVISLKGLEVGESIH 160
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISA 230
+S + + P +E + + I A
Sbjct: 161 LSQVAL-PKGASAQDHEDITIATIVA 185
>gi|410669124|ref|YP_006921495.1| 50S ribosomal protein L25 [Thermacetogenium phaeum DSM 12270]
gi|409106871|gb|AFV12996.1| 50S ribosomal protein L25 [Thermacetogenium phaeum DSM 12270]
Length = 215
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 103/199 (51%), Gaps = 26/199 (13%)
Query: 28 TIQAIPRECTGSRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
++QA RE G++ S R R+QG +PAV++ +++ + + S +Q+++ HSI
Sbjct: 5 SLQAQLRE-RGTKGSVRALRNQGMLPAVLYGKEVGNVLLSVPTKSLEQVITN-----HSI 58
Query: 87 LKSVELPFFCSTTFPLQIRAGS-GSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
ST L + G G S L V+ ++ RD +L+ F D
Sbjct: 59 ---------GSTLINLDVADGEKGGSYL-----VMCREIQRDPVRRELLHADFYQVDLTE 104
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKS-IRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
E++ ++PVV G PG+K+GG L++ +RT + P + I ++E D+S L+IGD++
Sbjct: 105 EIETEIPVVLVG--EAPGVKQGGILQNMLRTVIVSSLPTQ-IPERLEADISKLEIGDQLT 161
Query: 205 MSDIEVHPSWKLLSKNEKM 223
+ D+E +++S E +
Sbjct: 162 VGDLEPPAGVRIVSSRESV 180
>gi|150397463|ref|YP_001327930.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
medicae WSM419]
gi|166223724|sp|A6UBR5.1|RL25_SINMW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|150028978|gb|ABR61095.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sinorhizobium
medicae WSM419]
Length = 207
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A RE G S R G IPAV++ + P LST+
Sbjct: 2 SETYELKAETRERVGKGSSRELRRNGLIPAVIYGD---------KQPPLSIALSTK---- 48
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
+ + F +T + + G + +VLP D +++ F+
Sbjct: 49 -DVTMKIHAGGFMTTVATIDV---DGKKI-----RVLPKDYQLDPVRDFTMHVDFLRVKK 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G+++ V VPV F+ E PGLK+GG L +R ++ A++I + VD++ L IGD V
Sbjct: 100 GSQVSVQVPVRFENEEKSPGLKQGGALNIVRHEVELNVSADNIPEFLTVDLTGLKIGDTV 159
Query: 204 FMSDIEV 210
+S++E+
Sbjct: 160 HISNVEL 166
>gi|402703286|ref|ZP_10851265.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
helvetica C9P9]
Length = 203
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G+ + R +GR+PA+++ ++P +S E K+I +
Sbjct: 7 LEAKSRTEFGTGAARALRREGRVPAIIYGAG--------KTPVS---ISLEEKEITKYYR 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I KVLP V T + ++ FV+ ++ + K
Sbjct: 56 K---PAFISQLINLTIDK--------KQYKVLPKAVELHPVTDIVCHVDFVFLEEKAQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VPVV++G E G+K+GGY ++ + LC +I + +DV+N+ I + S I
Sbjct: 104 MEVPVVYEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKI 163
Query: 209 EVHPSWKLLSKNE 221
E+ +K E
Sbjct: 164 ELPKGCSFATKKE 176
>gi|374292402|ref|YP_005039437.1| 50S ribosomal protein L25 [Azospirillum lipoferum 4B]
gi|357424341|emb|CBS87208.1| 50S ribosomal protein L25 [Azospirillum lipoferum 4B]
Length = 198
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 22/177 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G + + R GRIPAV++ +++P +S E+ + +L P
Sbjct: 12 RERAGKGTARQTRRDGRIPAVIYG--------GKQAP---LTISLEKFEFTRVLHQ---P 57
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F + F + + + +VLP V T L++ F+ T V VPV
Sbjct: 58 GFFTHLFEVTVDG--------TAHRVLPRDVQFHPVTDVPLHVDFLRVSADTRTNVQVPV 109
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
F E GLK+GG L +R L+ CPA+ I I + D+GD + +S +++
Sbjct: 110 EFVDQEKSAGLKRGGVLNIVRHELELSCPADSIPEHITISCEGFDVGDSIHISSVKL 166
>gi|251772227|gb|EES52797.1| Ribosomal protein L25 [Leptospirillum ferrodiazotrophum]
Length = 191
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 82/184 (44%), Gaps = 20/184 (10%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R+ TG V+ R G +PAVV+ + Q LS K + K+++
Sbjct: 11 RDSTGKGVARTLRRSGHVPAVVYGS------------GKAQSLSALLKDVE---KAIQGH 55
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+ F L+I G+ S L L + RD TG+IL++ F+ + +K VPV
Sbjct: 56 AGRNGLFDLEISGGNSSRTAL----TLVRDIQRDPITGKILHVDFLEVSEKARVKNRVPV 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
G S G+KKGG L + L C + + I+VD S LDI + + D+ + P
Sbjct: 112 EVIG-SSPEGVKKGGILDVVHRELHVECLSFQMPDHIQVDASALDINQTLHLRDVTLPPG 170
Query: 214 WKLL 217
+L
Sbjct: 171 VTVL 174
>gi|51473784|ref|YP_067541.1| 50S ribosomal protein L25 [Rickettsia typhi str. Wilmington]
gi|383752560|ref|YP_005427660.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
typhi str. TH1527]
gi|383843395|ref|YP_005423898.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
typhi str. B9991CWPP]
gi|71153659|sp|Q68WD3.1|RL25_RICTY RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|51460096|gb|AAU04059.1| 50S ribosomal protein L25 [Rickettsia typhi str. Wilmington]
gi|380759203|gb|AFE54438.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
typhi str. TH1527]
gi|380760042|gb|AFE55276.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
typhi str. B9991CWPP]
Length = 203
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G+ + R +GR+PA+++ + + +S E K+I K
Sbjct: 7 LEAKSRTEFGTGAARALRREGRVPAIIYGAGKIPIS-----------ISLEEKEIT---K 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I KVLP V T + ++ FV+ + T+ K
Sbjct: 53 YYRRPAFISQLINLTIDK--------KQYKVLPKAVELHPVTDIVRHVDFVFLEAKTQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VPVV++G E G+K+GGY I+ + LC +I + +DV+N+ IG + S++
Sbjct: 104 MEVPVVYEGKERALGVKRGGYFNIIKRRVILLCDINNIPRNVTIDVTNMPIGTSLKSSEV 163
Query: 209 EVHPSWKLLSKNE 221
++ ++K E
Sbjct: 164 KLPIGCSFVTKKE 176
>gi|86282729|gb|ABC91792.1| 50S ribosomal protein L25 [Rhizobium etli CFN 42]
Length = 233
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P I + E +
Sbjct: 35 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPIAIAINTNE------V 80
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ KVLP D L++ F+ T+
Sbjct: 81 TKRIHAGGFMTTVATIEVDG--------KKHKVLPKDYQLDPVRDFTLHVDFLRVSGNTQ 132
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F PGLK GG L +R ++ CPA+ I +D+S IGD + +S
Sbjct: 133 VTVEIPVHFINEAKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIS 192
Query: 207 DI 208
++
Sbjct: 193 EV 194
>gi|402851637|ref|ZP_10899783.1| LSU ribosomal protein L25p [Rhodovulum sp. PH10]
gi|402498099|gb|EJW09865.1| LSU ribosomal protein L25p [Rhodovulum sp. PH10]
Length = 256
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 26/193 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G S R +GRIPAV++ D + P + E + K
Sbjct: 29 LEATARPRAGKGASRAVRREGRIPAVIYG--------DNQPPISIALDELE------VRK 74
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T F ++LD K V+P + L++ F+ +G
Sbjct: 75 RILAGRFLTTIF----------DIVLDGTKHRVIPRDYQVEPLRDLPLHVDFLRLGEGAT 124
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++V VPV E+ PG+K+GG + + ++ CPA+ I IEVD++ L+I +S
Sbjct: 125 IRVRVPVHTSNPEAAPGIKRGGTVSVVAHAVDLRCPADAIPESIEVDLTGLEINHSRHLS 184
Query: 207 DIEVHPSWKLLSK 219
DI + P+ + +K
Sbjct: 185 DIPLPPNVRPATK 197
>gi|328542809|ref|YP_004302918.1| 50S ribosomal protein L25 [Polymorphum gilvum SL003B-26A1]
gi|326412555|gb|ADZ69618.1| 50S ribosomal protein L25 [Polymorphum gilvum SL003B-26A1]
Length = 200
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 126 RDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEH 185
RDE ++++ F+ T L VD+PV F E+CPG+K+GG L +R +++ PA
Sbjct: 86 RDE----LMHIDFLRVSANTTLTVDIPVHFLNQETCPGIKRGGVLNIVRHAVEMTVPANA 141
Query: 186 ISPKIEVDVSNLDIGDRVFMSDI 208
I IE+D++ D+GD + +S +
Sbjct: 142 IPEFIELDLAKADLGDSLHISAV 164
>gi|399036824|ref|ZP_10733788.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF122]
gi|398065651|gb|EJL57272.1| ribosomal protein L25, Ctc-form [Rhizobium sp. CF122]
Length = 204
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPISIALSTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ KVLP D +++ F+ T+
Sbjct: 52 TKRIHAGGFMTTIATIEVDG--------KKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F E GLK GG L +R ++ CPA+ I VD+S IGD + +S
Sbjct: 104 VTVEIPVHFVNEEKSQGLKAGGVLNIVRHEIEVQCPADAIPEFFNVDLSGKKIGDSIHIS 163
Query: 207 DI 208
D+
Sbjct: 164 DL 165
>gi|162329634|ref|YP_470519.2| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli CFN 42]
gi|109893385|sp|Q2K5U4.2|RL25_RHIEC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
Length = 204
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P I + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPIAIAINTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ KVLP D L++ F+ T+
Sbjct: 52 TKRIHAGGFMTTVATIEVDG--------KKHKVLPKDYQLDPVRDFTLHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F PGLK GG L +R ++ CPA+ I +D+S IGD + +S
Sbjct: 104 VTVEIPVHFINEAKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIS 163
Query: 207 DI 208
++
Sbjct: 164 EV 165
>gi|344345142|ref|ZP_08775998.1| 50S ribosomal protein L25 [Marichromatium purpuratum 984]
gi|343803233|gb|EGV21143.1| 50S ribosomal protein L25 [Marichromatium purpuratum 984]
Length = 203
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 22/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
I A PRE G S R R G +PA+V+ + P Q+++ ++ L
Sbjct: 6 NIVAQPRETVGKGASRRLRRAGEVPAIVYG--------GHQEP---QMITLPHNEL---L 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K +E F S LQ+ + S VL D + R I ++ F+ G +L
Sbjct: 52 KHLEHEAFYSHVLTLQVGDETSSVVLKD--------LQRHPAKPFIQHVDFLRVTQGEKL 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
++ VP+ F ESC G+K GG + T ++ C + + IE+D+ +++G + +S+
Sbjct: 104 RMSVPLHFLNEESCVGVKAGGLVSRSLTEVEVSCLPQDLPEYIEIDMVAMEVGAILHLSE 163
Query: 208 IEV 210
+++
Sbjct: 164 LQL 166
>gi|146342827|ref|YP_001207875.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 278]
gi|146195633|emb|CAL79660.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 278]
Length = 191
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 62/119 (52%), Gaps = 2/119 (1%)
Query: 112 VLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGY 169
V LD K V+P H D +++ F+ G ++V VP+ G E PG+K+GG
Sbjct: 22 VTLDGKKHRVIPRDFHLDPVKDFPIHVDFMRLGQGATIRVSVPLHVVGSEGSPGVKRGGT 81
Query: 170 LKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKI 228
+ + +L+ C AE+I IE DVS L+I + +SD+++ K LS+ E L I
Sbjct: 82 VNIVTHTLELECLAENIPQFIEADVSALEINHSLHVSDVKLPTGVKTLSRGEDATLVTI 140
>gi|118594523|ref|ZP_01551870.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylophilales bacterium HTCC2181]
gi|118440301|gb|EAV46928.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylophilales bacterium HTCC2181]
Length = 230
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A RE G+ S R R G+ P V++ D + T S++ + + H+ +
Sbjct: 5 INANVRELKGTGASRRLRHAGKTPGVLYGGD--KEATSLEIDSKELFMQFRHEAFHASIL 62
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ L AG +V+L ++ P++ I+++ F ++ ++
Sbjct: 63 TLNL-------------AGKKEAVILRDFQMHPVR-------NNIVHIDFQRINENEKIS 102
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP F E+ PG+K +GG + I T + C + + IEVD+S L IGD + +S+
Sbjct: 103 VKVPFHFINEETAPGVKLEGGLISHIMTEIDISCLPKDLPQYIEVDMSALSIGDSIHLSE 162
Query: 208 IEV 210
++V
Sbjct: 163 VKV 165
>gi|319781882|ref|YP_004141358.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
gi|317167770|gb|ADV11308.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Mesorhizobium
ciceri biovar biserrulae WSM1271]
Length = 213
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 92/208 (44%), Gaps = 28/208 (13%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G++PAV++ D++ P + + I
Sbjct: 6 YELKAEAREQVGKGSARAVRRNGKVPAVIYG--------DKQPPLAIALTYKD------I 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADD 143
+ F +T + + G VL ++ P+K VH D F+
Sbjct: 52 YYKIHGGGFLTTIATIDVD-GKKIQVLPKDFQLDPVKDFPVHVD----------FLRIGK 100
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
TE+ VDVPV F + PG+K+GG L +R +++ CPA I I VD++ +IGD +
Sbjct: 101 DTEVNVDVPVHFINEDKSPGIKRGGVLNIVRHEVEFHCPANAIPEFITVDLTGANIGDSI 160
Query: 204 FMSDIEVHPSWKLLSKNEKMPLCKISAT 231
+S +++ K + + + I+ +
Sbjct: 161 HISAVKLPAGVKPVISDRDFTIATIAGS 188
>gi|206895312|ref|YP_002247107.1| 50S ribosomal protein L25 [Coprothermobacter proteolyticus DSM
5265]
gi|206737929|gb|ACI17007.1| ribosomal protein L25, Ctc-form [Coprothermobacter proteolyticus
DSM 5265]
Length = 211
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 89/186 (47%), Gaps = 35/186 (18%)
Query: 37 TGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFC 96
TG+R + R G +PAV++ QD+ +P L ER Q+
Sbjct: 13 TGTRKVKKIRKNGYVPAVLYGQDM------EATP-----LLLERSQV------------- 48
Query: 97 STTFPLQIRAGSGSSVLLD-SGKVLPIKVHRDEE---TGRILNLVFVWADDGTELKVDVP 152
++ R G S+ LD GK++ + V ++ + +++L F G+ + V +P
Sbjct: 49 -----IRERVTLGRSLELDVDGKIVRVIVKEEQVDPISQEVIHLDFQALSAGSTVTVSIP 103
Query: 153 VVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
+V G G+KKGG L+ ++ P E + ++ VDVSN+DIGD + + ++++ P
Sbjct: 104 IVLVG--EPVGIKKGGILEFPTREIEVELPTEKLVEQVTVDVSNMDIGDIIHIGELDLPP 161
Query: 213 SWKLLS 218
K+ +
Sbjct: 162 EAKIFA 167
>gi|254456302|ref|ZP_05069731.1| ribosomal protein L25, Ctc-form [Candidatus Pelagibacter sp.
HTCC7211]
gi|207083304|gb|EDZ60730.1| ribosomal protein L25, Ctc-form [Candidatus Pelagibacter sp.
HTCC7211]
Length = 232
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 81/166 (48%), Gaps = 22/166 (13%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R+ G +PA+++ + ++ + +S +K + S+ +E F S L +
Sbjct: 21 RNNGNVPAIIYGGE-----------AQNEKISISKKLLKSL---IEKENFLSNIVTLNVD 66
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
S + VLP ++ + +++ F+ G ++K++VPV F E PGLK
Sbjct: 67 GKSQN--------VLPKEIKYHIISDEPIHVDFLRVVPGLKIKIEVPVQFINHEKSPGLK 118
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
+GG L +R ++ CP+E I + +D+ +DIG+ +S I++
Sbjct: 119 RGGVLNIVRRKVELRCPSEKIPESLVIDLDGIDIGESFKISSIKLE 164
>gi|329115062|ref|ZP_08243817.1| 50S ribosomal protein L25 [Acetobacter pomorum DM001]
gi|326695505|gb|EGE47191.1| 50S ribosomal protein L25 [Acetobacter pomorum DM001]
Length = 204
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 14/152 (9%)
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWAD 142
I+K ++ + S + +++ G L+ ++ P+K VH D F+
Sbjct: 50 IIKGIQASGWRSRVYEIKVD-GKAERALVRDVQLHPVKDSPVHVD----------FLRLA 98
Query: 143 DGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDR 202
G+ + V+V V F+ E+CPG+K+GG L +R +++ PA++I VD+S LDI D
Sbjct: 99 AGSRVHVEVSVHFENEETCPGIKRGGVLNVVRHTIEVDVPADNIPEFFTVDLSKLDIADN 158
Query: 203 VFMSDIEVHPSWKLLSKNEKMPLCKISATKLE 234
V D++ L+ E + I+A ++
Sbjct: 159 VRWEDVQGTAGVTPLTHEENFVVASIAAPSVD 190
>gi|198283910|ref|YP_002220231.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218666710|ref|YP_002426544.1| 50S ribosomal protein L25 [Acidithiobacillus ferrooxidans ATCC
23270]
gi|415991520|ref|ZP_11560066.1| ribosomal protein L25 [Acidithiobacillus sp. GGI-221]
gi|198248431|gb|ACH84024.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Acidithiobacillus ferrooxidans ATCC 53993]
gi|218518923|gb|ACK79509.1| ribosomal protein L25 [Acidithiobacillus ferrooxidans ATCC 23270]
gi|339835275|gb|EGQ62967.1| ribosomal protein L25 [Acidithiobacillus sp. GGI-221]
Length = 202
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 85/183 (46%), Gaps = 22/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
I A PRE G R S R R G +PAV++ + +++L ER H I
Sbjct: 5 AIAAQPREDIGRRASRRLRRTGMVPAVLYGDGKAAMGICIEARLLRKLLPDERAYTHVI- 63
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+++LP GS + L+ ++ P K EE +L++ F+ G ++
Sbjct: 64 -TLQLP-------------GSKETALIRDIQMHPYK----EE---VLHMDFLRVHAGEQV 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
++ VPV F +C G+K GG L ++ P + + ++VD++ L IGD + +S
Sbjct: 103 RLHVPVHFLNESTCAGIKAGGVLHRALVEVEVEAPVDRLPEALQVDIAGLHIGDSLHLSQ 162
Query: 208 IEV 210
I V
Sbjct: 163 ISV 165
>gi|338536292|ref|YP_004669626.1| 50S ribosomal protein L25/general stress protein Ctc [Myxococcus
fulvus HW-1]
gi|337262388|gb|AEI68548.1| 50S ribosomal protein L25/general stress protein Ctc [Myxococcus
fulvus HW-1]
Length = 218
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++A PRE +G V+ R R+QG IPAVV+ + L + LS + K ++
Sbjct: 7 TLEAKPREGSGKGVARRLRAQGLIPAVVYGKHL----------EKPVHLSVDPK---AVR 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+++ P +T +++ G VLL ++ P+ T IL+ F+ ++
Sbjct: 54 QAINTPHKFNTLINIKVEGGD-RQVLLKDYQMEPV-------TRAILHADFLDVRPNEQV 105
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KV+VP+V G G+ GG L R ++ I +IEVDV+ + I + + ++D
Sbjct: 106 KVNVPLVLTG--RAQGVADGGLLTQARREIEVWSLPASIPERIEVDVTPMKITEVLHIND 163
Query: 208 IEV 210
+++
Sbjct: 164 VKL 166
>gi|424862817|ref|ZP_18286730.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86A]
gi|400757438|gb|EJP71649.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86A]
Length = 238
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 91/183 (49%), Gaps = 26/183 (14%)
Query: 29 IQAIPRECTGSRVSARDRS-QGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A PRE TGS + R G +PA+V+ + K+ L+ + K ++ +
Sbjct: 7 LNADPRERTGSNKARVIRKVDGMVPAIVYGDE-------------KETLNIKLK-LNELT 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K+ E F T L I+ G KV+ ++ RD G+ L+ F T+L
Sbjct: 53 KASENELFY--TQVLLIKTGDNEE------KVVLKELQRDPAKGKFLHADFQRVSSKTKL 104
Query: 148 KVDVPVVFKGVESCPGLKKGGYL--KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
KV +PV F E C G+++ G + K+IR ++ +C A +I I+VD+ L++GD + +
Sbjct: 105 KVVIPVSFINEEDCIGVREDGGVVTKTIR-EIEIMCLAGNIPESIDVDIEKLNLGDSIRL 163
Query: 206 SDI 208
++I
Sbjct: 164 TEI 166
>gi|395781885|ref|ZP_10462295.1| 50S ribosomal protein L25 [Bartonella rattimassiliensis 15908]
gi|395420327|gb|EJF86608.1| 50S ribosomal protein L25 [Bartonella rattimassiliensis 15908]
Length = 206
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 26/206 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ + KQ T I
Sbjct: 5 YTLKAEKRERVGKGSSRELRRNGLIPAVIYGE--------------KQPPLTITVPYKEI 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDG 144
+ F +T ++++LD K VLP D L++ F+ +
Sbjct: 51 FYKIHAGGFRTTI----------ATIVLDKQKIMVLPKDYQLDPVRDFPLHVDFLRISEK 100
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
+ ++V++PV F + PGLKKGG L +R ++ PA I IE+D+S+ IGD +
Sbjct: 101 SFVEVNIPVRFLNEDIAPGLKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIH 160
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISA 230
+S +++ + ++ + I+A
Sbjct: 161 ISAVQLPKGVTPIIQDRDFTIATIAA 186
>gi|294085760|ref|YP_003552520.1| 50S ribosomal protein L25 [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292665335|gb|ADE40436.1| 50S ribosomal protein L25 [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 211
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A RE G + R G +PAV++ D++ P + + E I
Sbjct: 6 TISAEQRERVGKGSARAARRAGLVPAVIYG--------DKKEPLGINMSTRE------IT 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K V P + + G S+VL I+ H +T IL++ F+ ++
Sbjct: 52 KIVHQPGIFGRLLEIVVD-GKKSTVLTRD-----IQFHPVSDT--ILHMDFLRVSGSVKV 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VPV F + CP LK GG L +R ++ CPA I KI +D+ L IGD + +S
Sbjct: 104 AVGVPVEFINEDLCPALKIGGVLNVVRHEIELNCPATDIPEKIIIDLDGLKIGDSIHISA 163
Query: 208 I 208
I
Sbjct: 164 I 164
>gi|15966107|ref|NP_386460.1| 50S ribosomal protein L25 [Sinorhizobium meliloti 1021]
gi|334317111|ref|YP_004549730.1| 50S ribosomal protein L25 [Sinorhizobium meliloti AK83]
gi|384530239|ref|YP_005714327.1| 50S ribosomal protein L25 [Sinorhizobium meliloti BL225C]
gi|384535280|ref|YP_005719365.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
meliloti SM11]
gi|407721413|ref|YP_006841075.1| 50S ribosomal protein L25 [Sinorhizobium meliloti Rm41]
gi|418403160|ref|ZP_12976656.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
meliloti CCNWSX0020]
gi|71153163|sp|Q92N68.1|RL25_RHIME RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|15075377|emb|CAC46933.1| Putative 50S ribosomal protein L25 [Sinorhizobium meliloti 1021]
gi|333812415|gb|AEG05084.1| 50S ribosomal protein L25 [Sinorhizobium meliloti BL225C]
gi|334096105|gb|AEG54116.1| 50S ribosomal protein L25 [Sinorhizobium meliloti AK83]
gi|336032172|gb|AEH78104.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
meliloti SM11]
gi|359502844|gb|EHK75410.1| 50S ribosomal protein L25/general stress protein Ctc [Sinorhizobium
meliloti CCNWSX0020]
gi|407319645|emb|CCM68249.1| 50S ribosomal protein L25 [Sinorhizobium meliloti Rm41]
Length = 204
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R+ G S R G IPAV++ + P LST+
Sbjct: 2 SETYELKAETRDRVGKGSSRELRRNGLIPAVIYGD---------KQPPLSIALSTK---- 48
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
+ + F +T + + +G + +VLP D +++ F+
Sbjct: 49 -DVTMKIHAGGFMTTVATIDV---NGEKI-----RVLPKDYQLDPVRDFTMHVDFLRVSK 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G+++ V VPV F+ E PGLK+GG L +R ++ A++I + VD++ L IGD V
Sbjct: 100 GSQVSVQVPVHFENEEKSPGLKQGGALNIVRHEVELNVSADNIPESLTVDLTGLKIGDTV 159
Query: 204 FMSDIEV 210
+S++++
Sbjct: 160 HISNVKL 166
>gi|406987406|gb|EKE07766.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 188
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 88/179 (49%), Gaps = 19/179 (10%)
Query: 41 VSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTF 100
V+++ R +G +PA+++ +P ++ + + IL+ ++ +T F
Sbjct: 15 VTSQLRREGMVPAILYGAG------KAGTP-----VAVKNDTLKEILRKIQPGRLSTTIF 63
Query: 101 PLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVES 160
L+ A + +++ D V + I ++ F+ ++ ++++VP+ G
Sbjct: 64 ELERGAKTIQAIIKD--------VQYHVASYEIEHVDFLEMEESKLVEINVPISLVGAAD 115
Query: 161 CPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSK 219
C G+K GG+++ + SLK C ++I +D+ N+ IG +SD+E+ PS + L+K
Sbjct: 116 CAGVKLGGFIRQVIRSLKVSCLPKNIPESFSLDIRNVGIGQSKLLSDLEIPPSVRPLAK 174
>gi|149916128|ref|ZP_01904650.1| ribosomal protein L25, Ctc-form [Roseobacter sp. AzwK-3b]
gi|149809983|gb|EDM69832.1| ribosomal protein L25, Ctc-form [Roseobacter sp. AzwK-3b]
Length = 220
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 22/202 (10%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R TG + R +P +VF D+ P QI + ++K
Sbjct: 12 LHAQERTGTGKGAARAVRRAHMVPGIVFGGDV--------DPLPIQI------PYNVLIK 57
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F ST F L++ D +V+ V RD +L + T++
Sbjct: 58 KLKEGRFKSTLFNLKVEG-------HDDVRVICRDVQRDVVKDLPTHLDLMRLRRTTKIN 110
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ +PV F G + PGLKKGG L +R ++ + A I ++ VD+S +DIGD + +S +
Sbjct: 111 LFIPVTFTGEDVAPGLKKGGVLTVVRNEIELVVTAGDIPEEVTVDLSGMDIGDTLTISQV 170
Query: 209 EVHPSWKLLSKNEKMPLCKISA 230
+ P + + +C ISA
Sbjct: 171 TL-PEGAQTTIDRDFVICNISA 191
>gi|261219662|ref|ZP_05933943.1| 50S ribosomal protein L25 [Brucella ceti M13/05/1]
gi|261322551|ref|ZP_05961748.1| 50S ribosomal protein L25 [Brucella ceti M644/93/1]
gi|260924751|gb|EEX91319.1| 50S ribosomal protein L25 [Brucella ceti M13/05/1]
gi|261295241|gb|EEX98737.1| 50S ribosomal protein L25 [Brucella ceti M644/93/1]
Length = 207
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 2 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 50 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLLVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E+D+S L+IGD V
Sbjct: 100 KSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSV 159
Query: 204 FMSDIEV 210
+S +++
Sbjct: 160 HISAVKL 166
>gi|218675424|ref|ZP_03525093.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli GR56]
Length = 204
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPIAIALNTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ KVLP D +++ F+ T+
Sbjct: 52 TKRIHAGGFMTTVATIEVDG--------KKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F PGLK GG L +R ++ CPA+ I ++D+S IGD + +S
Sbjct: 104 VSVEIPVHFTNEAKSPGLKVGGVLNIVRHQVEVHCPADAIPEFFDIDLSGKKIGDSIHIS 163
Query: 207 DI 208
++
Sbjct: 164 EV 165
>gi|242280388|ref|YP_002992517.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio
salexigens DSM 2638]
gi|242123282|gb|ACS80978.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio
salexigens DSM 2638]
Length = 196
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 25/194 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T +A R TG + + R+QG +P V ++QD +LS + +
Sbjct: 6 TFKAELRTKTGKSANRQLRNQGMVPVVFYSQD-----------GENLVLSVNENEFVKMY 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ V + F L++ + +++ KV D R ++ F+ L
Sbjct: 55 RKVG----TTRVFSLEVDGKTYDTLIW--------KVQMDPVRPRPNHIDFLGVSKDRTL 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KVDVPVV +G PG+K GG + R L C A + +I V++ ++++GD VF+++
Sbjct: 103 KVDVPVVTEG--KAPGVKLGGRMAIYRPKLTVACTAATLPAEIVVNIDSMNVGDTVFVNE 160
Query: 208 IEVHPSWKLLSKNE 221
I++ ++ N
Sbjct: 161 IDLGEGASVVFDNN 174
>gi|392950437|ref|ZP_10315992.1| 50S ribosomal protein L25P [Hydrocarboniphaga effusa AP103]
gi|392950624|ref|ZP_10316179.1| 50S ribosomal protein L25P [Hydrocarboniphaga effusa AP103]
gi|391859399|gb|EIT69927.1| 50S ribosomal protein L25P [Hydrocarboniphaga effusa AP103]
gi|391859586|gb|EIT70114.1| 50S ribosomal protein L25P [Hydrocarboniphaga effusa AP103]
Length = 224
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 23/182 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
I+A R G+ S R R G +P +V+ ++ P Q++S ++
Sbjct: 6 VIEAEARSAQGTGASRRLRHAGSVPGIVYG--------GKKEP---QMISVNHNEL---W 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K ++L F S L + S VL D +HR ++L+L L
Sbjct: 52 KQLKLEAFYSAIITLNVGGESEQVVLKD--------LHRHPVREQVLHLDLQRIQADVAL 103
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++ VP+ FKG + PG+K GGY++ + ++ C + + E+D+S L++ + + +S
Sbjct: 104 RIRVPLHFKGGDVAPGVKTGGGYVEHLLNEVEVECLPKDLPEAFEIDISGLNVNESIHLS 163
Query: 207 DI 208
I
Sbjct: 164 QI 165
>gi|148559338|ref|YP_001259412.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella ovis
ATCC 25840]
gi|148370595|gb|ABQ60574.1| ribosomal protein L25, Ctc-form [Brucella ovis ATCC 25840]
Length = 233
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 15 SRTPFS---RTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPS 71
S TP + S + ++A R G S R G+IPAV++ D++ P
Sbjct: 16 SDTPVTLKGNAMSETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPL 67
Query: 72 RKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETG 131
+ E I + F +T +++ G + +VLP D
Sbjct: 68 AIAVSYKE------IFYKIHGSGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRD 113
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIE 191
++ F+ + + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E
Sbjct: 114 FPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALE 173
Query: 192 VDVSNLDIGDRVFMSDIEV 210
+D+S L+IGD V +S +++
Sbjct: 174 IDLSGLEIGDSVHISAVKL 192
>gi|258541469|ref|YP_003186902.1| 50S ribosomal protein L25/general stress protein Ctc [Acetobacter
pasteurianus IFO 3283-01]
gi|384041390|ref|YP_005480134.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-12]
gi|384049905|ref|YP_005476968.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-03]
gi|384053015|ref|YP_005486109.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-07]
gi|384056247|ref|YP_005488914.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-22]
gi|384058888|ref|YP_005498016.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-26]
gi|384062182|ref|YP_005482824.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO 3283-32]
gi|384118258|ref|YP_005500882.1| 50S ribosomal protein L25 [Acetobacter pasteurianus IFO
3283-01-42C]
gi|421850152|ref|ZP_16283119.1| LSU ribosomal protein L25P [Acetobacter pasteurianus NBRC 101655]
gi|421853284|ref|ZP_16285961.1| LSU ribosomal protein L25P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|256632547|dbj|BAH98522.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-01]
gi|256635604|dbj|BAI01573.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-03]
gi|256638659|dbj|BAI04621.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-07]
gi|256641713|dbj|BAI07668.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-22]
gi|256644768|dbj|BAI10716.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-26]
gi|256647823|dbj|BAI13764.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-32]
gi|256650876|dbj|BAI16810.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256653867|dbj|BAI19794.1| LSU ribosomal protein L25P [Acetobacter pasteurianus IFO 3283-12]
gi|371459053|dbj|GAB28322.1| LSU ribosomal protein L25P [Acetobacter pasteurianus NBRC 101655]
gi|371478502|dbj|GAB31164.1| LSU ribosomal protein L25P [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 204
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 14/152 (9%)
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWAD 142
I+K ++ + S + +++ G L+ ++ P+K VH D F+
Sbjct: 50 IVKGIQTSGWRSRVYEIKVD-GKAERALVRDVQLHPVKDSPVHVD----------FLRLA 98
Query: 143 DGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDR 202
G+ + V+V V F+ E+CPG+K+GG L +R +++ PA++I VD+S LDI D
Sbjct: 99 AGSRVHVEVSVHFENEETCPGIKRGGVLNVVRHTIEVDVPADNIPEFFTVDLSKLDIADN 158
Query: 203 VFMSDIEVHPSWKLLSKNEKMPLCKISATKLE 234
V D++ L+ E + I+A ++
Sbjct: 159 VRWEDVQGTEGVTPLTHEENFVVASIAAPSVD 190
>gi|225627977|ref|ZP_03786013.1| ribosomal protein L25, Ctc-form [Brucella ceti str. Cudo]
gi|237815928|ref|ZP_04594925.1| ribosomal protein L25, Ctc-form [Brucella abortus str. 2308 A]
gi|294852853|ref|ZP_06793526.1| large subunit ribosomal protein L25 [Brucella sp. NVSL 07-0026]
gi|297248806|ref|ZP_06932524.1| large subunit ribosomal protein L25 [Brucella abortus bv. 5 str.
B3196]
gi|17982392|gb|AAL51662.1| lsu ribosomal protein l25p [Brucella melitensis bv. 1 str. 16M]
gi|225617140|gb|EEH14186.1| ribosomal protein L25, Ctc-form [Brucella ceti str. Cudo]
gi|237789226|gb|EEP63437.1| ribosomal protein L25, Ctc-form [Brucella abortus str. 2308 A]
gi|294821442|gb|EFG38441.1| large subunit ribosomal protein L25 [Brucella sp. NVSL 07-0026]
gi|297175975|gb|EFH35322.1| large subunit ribosomal protein L25 [Brucella abortus bv. 5 str.
B3196]
Length = 233
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 90/199 (45%), Gaps = 25/199 (12%)
Query: 15 SRTPFS---RTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPS 71
S TP + S + ++A R G S R G+IPAV++ D++ P
Sbjct: 16 SDTPVTLKGNAMSETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPL 67
Query: 72 RKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETG 131
+ E I + F +T +++ G + +VLP D
Sbjct: 68 AIAVSYKE------IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRD 113
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIE 191
++ F+ + + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E
Sbjct: 114 FPQHVDFLRVSAKSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALE 173
Query: 192 VDVSNLDIGDRVFMSDIEV 210
+D+S L+IGD V +S +++
Sbjct: 174 IDLSGLEIGDSVHISAVKL 192
>gi|218463175|ref|ZP_03503266.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli Kim 5]
Length = 202
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 86/183 (46%), Gaps = 24/183 (13%)
Query: 27 HTIQAIPRECTGSRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
+ ++A RE G + SAR+ R G IPAV++ D+++P + + E
Sbjct: 6 YELKAEARERVG-KGSARELRRNGFIPAVIYG--------DKQAPIAIALNTNE------ 50
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ K + F +T +++ KVLP D +++ F+ T
Sbjct: 51 VTKRIHAGGFMTTVATIEVDG--------KKYKVLPKDYQLDPVRDFTMHVDFLRVSGNT 102
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
++ V++PV F E GLK GG L +R S++ CPA+ I ++D+S IGD + +
Sbjct: 103 QVTVEIPVHFINEEKSQGLKVGGVLNIVRHSVEVHCPADAIPEFFDIDLSGKKIGDSIHI 162
Query: 206 SDI 208
S++
Sbjct: 163 SEV 165
>gi|108763637|ref|YP_633230.1| 50S ribosomal protein L25 [Myxococcus xanthus DK 1622]
gi|108467517|gb|ABF92702.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Myxococcus
xanthus DK 1622]
Length = 220
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 24/203 (11%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++A PRE +G V+ R R+QG IPAVV+ + L + +S K ++
Sbjct: 7 TLEAKPREGSGKGVARRLRAQGLIPAVVYGKHL----------EKPVHISVNPK---AVR 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+++ P +T +++ G VLL ++ P+ T IL+ F+ ++
Sbjct: 54 QAINTPHKFNTLIQIKVEGGD-RQVLLKDYQMDPV-------TRAILHADFLDVRPTDKV 105
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KV+VP+V G G+ GG L R ++ I KIEVDV+ + I + + ++D
Sbjct: 106 KVNVPLVLSG--RAQGVADGGLLTQARREIEVWSLPGAIPEKIEVDVTPMKIAEVLHIND 163
Query: 208 IEVHPSWKLLSKNEKMPLCKISA 230
+++ P + N L ISA
Sbjct: 164 LKL-PEGVSVKTNVNYTLAVISA 185
>gi|167644635|ref|YP_001682298.1| 50S ribosomal protein L25/general stress protein Ctc [Caulobacter
sp. K31]
gi|189042349|sp|B0T899.1|RL25_CAUSK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|167347065|gb|ABZ69800.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
sp. K31]
Length = 199
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 22/177 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R+ G+ S R QG++P V++ L N + ++ L T + H +
Sbjct: 11 RDRAGTGGSRETRRQGKVPGVLYGGPLAPVNIAVKGNEFRKALHTGKLLGHLVT------ 64
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
LQ SV+ + + P+ T L+ D+ +K+++PV
Sbjct: 65 --------LQ-HGDEKQSVIAKAVQFHPV-------TDEPLHFDLYRVDEHQLIKIEIPV 108
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
FK + GLKKGG L+ IR +++ CPA+ I ++ +D+++ DIGD + +S+I++
Sbjct: 109 HFKNHDISVGLKKGGTLEIIRHTVELACPADKIPEELVIDLASHDIGDTIRISEIKL 165
>gi|239948215|ref|ZP_04699968.1| ribosomal protein L25, Ctc-form [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922491|gb|EER22515.1| ribosomal protein L25, Ctc-form [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 203
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 89/193 (46%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G+ + R +GR+PA+++ + S S +S E K+I +
Sbjct: 7 LEAKSRVEFGTGAARALRREGRVPAIIYG-------AGKTSVS----ISLEEKEITKYYR 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I KVLP V T + ++ F++ ++ T+ K
Sbjct: 56 K---PAFISQLINLTIDK--------KKYKVLPKAVELHPVTDIVRHVDFIFLEEKTQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VPVV++G E G+K+GGY ++ + LC +I + +DV+N+ I + I
Sbjct: 104 MEVPVVYEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSLKI 163
Query: 209 EVHPSWKLLSKNE 221
E+ ++K E
Sbjct: 164 ELPKGCSFVTKKE 176
>gi|83595075|ref|YP_428827.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodospirillum rubrum ATCC 11170]
gi|109893389|sp|Q2RMV5.1|RL25_RHORT RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|83577989|gb|ABC24540.1| LSU ribosomal protein L25P [Rhodospirillum rubrum ATCC 11170]
Length = 210
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G + R +G++PAV++ R+ P +LS + IH+ +
Sbjct: 6 TLSAKGRDRAGKGAARATRREGQVPAVIYG--------GRQDPV---LLSLAPRLIHTEM 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ F S F L + G V++ + P+ T +++ F+ TE+
Sbjct: 55 RKAG---FSSRLFDLTVEGGETHRVMVQDVQFHPV-------TDMPIHVDFLRIGKDTEV 104
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V +PV F + PGLK+GG L +R ++ + + EVD++ ++GD + +
Sbjct: 105 TVAIPVHFINETASPGLKRGGVLNVVRHEIEVHGRPDALPDFFEVDLTGAEVGDSIHVGV 164
Query: 208 IEVHPSWKLLSKNEKMPLCKISA 230
+++ + + +C I+A
Sbjct: 165 VKIPEGVRPVIAERDFTICTIAA 187
>gi|409438366|ref|ZP_11265445.1| 50S ribosomal protein L25 [Rhizobium mesoamericanum STM3625]
gi|408749917|emb|CCM76616.1| 50S ribosomal protein L25 [Rhizobium mesoamericanum STM3625]
Length = 204
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPISIALSTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ KVLP D +++ F+ T+
Sbjct: 52 TKRIHAGGFMTTIATIEVDG--------KKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F E GLK GG L +R ++ CPA+ I VD++ IGD + +S
Sbjct: 104 VTVEIPVHFINEEKSQGLKAGGVLNIVRHEIEVHCPADAIPEFFNVDLNGKKIGDSIHIS 163
Query: 207 DI 208
D+
Sbjct: 164 DL 165
>gi|333369959|ref|ZP_08462043.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychrobacter
sp. 1501(2011)]
gi|332968801|gb|EGK07849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychrobacter
sp. 1501(2011)]
Length = 225
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 23 TSYYHTIQAIPR--ECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTER 80
+ +T+ I R + G S R R Q +PA+++ + P+ I + E
Sbjct: 2 SDILYTVNGIARTDDQQGKGASRRLRKQNLVPAIIYGGN--------EEPTAIAIKNNE- 52
Query: 81 KQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVW 140
+ K +E F S + + +V+ D + R G ++ F
Sbjct: 53 -----LWKLLENEAFFSNILTINLDGEEHLAVIKD--------LQRHPSKGFPMHADFQR 99
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
G ++ +++PV F G E PG+K GG L ++ T ++ +C + +EVDVS L+IG
Sbjct: 100 IVKGQKINMNIPVHFVGREEAPGIKAGGILSTLVTDIEIVCLPSALPEYLEVDVSGLEIG 159
Query: 201 DRVFMSDIEV 210
+ + ++DI++
Sbjct: 160 ESLHLTDIKL 169
>gi|23502403|ref|NP_698530.1| 50S ribosomal protein L25 [Brucella suis 1330]
gi|62290420|ref|YP_222213.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. 9-941]
gi|82700343|ref|YP_414917.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
melitensis biovar Abortus 2308]
gi|161511157|ref|NP_539398.2| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M]
gi|163843791|ref|YP_001628195.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
ATCC 23445]
gi|189024649|ref|YP_001935417.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
abortus S19]
gi|225853014|ref|YP_002733247.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
melitensis ATCC 23457]
gi|256263507|ref|ZP_05466039.1| 50S ribosomal protein L25 [Brucella melitensis bv. 2 str. 63/9]
gi|256369951|ref|YP_003107462.1| 50S ribosomal protein L25 [Brucella microti CCM 4915]
gi|260546956|ref|ZP_05822695.1| ribosomal protein L25 [Brucella abortus NCTC 8038]
gi|260565243|ref|ZP_05835727.1| ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M]
gi|260755253|ref|ZP_05867601.1| 50S ribosomal protein L25 [Brucella abortus bv. 6 str. 870]
gi|260758474|ref|ZP_05870822.1| 50S ribosomal protein L25 [Brucella abortus bv. 4 str. 292]
gi|260762299|ref|ZP_05874642.1| 50S ribosomal protein L25 [Brucella abortus bv. 2 str. 86/8/59]
gi|260884268|ref|ZP_05895882.1| 50S ribosomal protein L25 [Brucella abortus bv. 9 str. C68]
gi|261214517|ref|ZP_05928798.1| 50S ribosomal protein L25 [Brucella abortus bv. 3 str. Tulya]
gi|261222673|ref|ZP_05936954.1| 50S ribosomal protein L25 [Brucella ceti B1/94]
gi|261315706|ref|ZP_05954903.1| 50S ribosomal protein L25 [Brucella pinnipedialis M163/99/10]
gi|261318144|ref|ZP_05957341.1| 50S ribosomal protein L25 [Brucella pinnipedialis B2/94]
gi|261325595|ref|ZP_05964792.1| 50S ribosomal protein L25 [Brucella neotomae 5K33]
gi|261752824|ref|ZP_05996533.1| 50S ribosomal protein L25 [Brucella suis bv. 5 str. 513]
gi|261758713|ref|ZP_06002422.1| ribosomal protein L25 [Brucella sp. F5/99]
gi|265989175|ref|ZP_06101732.1| 50S ribosomal protein L25 [Brucella pinnipedialis M292/94/1]
gi|265991589|ref|ZP_06104146.1| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. Rev.1]
gi|265995427|ref|ZP_06107984.1| 50S ribosomal protein L25 [Brucella melitensis bv. 3 str. Ether]
gi|265998637|ref|ZP_06111194.1| 50S ribosomal protein L25 [Brucella ceti M490/95/1]
gi|306843118|ref|ZP_07475740.1| ribosomal protein L25, Ctc-form [Brucella sp. BO2]
gi|306844535|ref|ZP_07477124.1| ribosomal protein L25, Ctc-form [Brucella inopinata BO1]
gi|340791143|ref|YP_004756608.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
pinnipedialis B2/94]
gi|376272734|ref|YP_005151312.1| 50S ribosomal protein L25 [Brucella abortus A13334]
gi|376281195|ref|YP_005155201.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
VBI22]
gi|384211896|ref|YP_005600978.1| 50S ribosomal protein L25 [Brucella melitensis M5-90]
gi|384225189|ref|YP_005616353.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
1330]
gi|384409006|ref|YP_005597627.1| 50S ribosomal protein25 [Brucella melitensis M28]
gi|384445567|ref|YP_005604286.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
melitensis NI]
gi|423166403|ref|ZP_17153106.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI435a]
gi|423171222|ref|ZP_17157897.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI474]
gi|423172696|ref|ZP_17159367.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI486]
gi|423178611|ref|ZP_17165255.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI488]
gi|423180653|ref|ZP_17167294.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI010]
gi|423183784|ref|ZP_17170421.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI016]
gi|423185276|ref|ZP_17171890.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI021]
gi|423188411|ref|ZP_17175021.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI259]
gi|68053010|sp|Q57BY2.1|RL25_BRUAB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|68053226|sp|Q8YIG3.2|RL25_BRUME RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153128|sp|Q8FZE8.1|RL25_BRUSU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109893347|sp|Q2YLX6.1|RL25_BRUA2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189042348|sp|B0CHX4.1|RL25_BRUSI RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736287|sp|B2S6Z6.1|RL25_BRUA1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801037|sp|C0REH1.1|RL25_BRUMB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|23348389|gb|AAN30445.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brucella suis
1330]
gi|62196552|gb|AAX74852.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brucella
abortus bv. 1 str. 9-941]
gi|82616444|emb|CAJ11507.1| Ribosomal protein L25 [Brucella melitensis biovar Abortus 2308]
gi|163674514|gb|ABY38625.1| ribosomal protein L25, Ctc-form [Brucella suis ATCC 23445]
gi|189020221|gb|ACD72943.1| Ribosomal protein L25 [Brucella abortus S19]
gi|225641379|gb|ACO01293.1| ribosomal protein L25, Ctc-form [Brucella melitensis ATCC 23457]
gi|256000114|gb|ACU48513.1| 50S ribosomal protein L25 [Brucella microti CCM 4915]
gi|260096006|gb|EEW79883.1| ribosomal protein L25 [Brucella abortus NCTC 8038]
gi|260151311|gb|EEW86405.1| ribosomal protein L25 [Brucella melitensis bv. 1 str. 16M]
gi|260668792|gb|EEX55732.1| 50S ribosomal protein L25 [Brucella abortus bv. 4 str. 292]
gi|260672731|gb|EEX59552.1| 50S ribosomal protein L25 [Brucella abortus bv. 2 str. 86/8/59]
gi|260675361|gb|EEX62182.1| 50S ribosomal protein L25 [Brucella abortus bv. 6 str. 870]
gi|260873796|gb|EEX80865.1| 50S ribosomal protein L25 [Brucella abortus bv. 9 str. C68]
gi|260916124|gb|EEX82985.1| 50S ribosomal protein L25 [Brucella abortus bv. 3 str. Tulya]
gi|260921257|gb|EEX87910.1| 50S ribosomal protein L25 [Brucella ceti B1/94]
gi|261297367|gb|EEY00864.1| 50S ribosomal protein L25 [Brucella pinnipedialis B2/94]
gi|261301575|gb|EEY05072.1| 50S ribosomal protein L25 [Brucella neotomae 5K33]
gi|261304732|gb|EEY08229.1| 50S ribosomal protein L25 [Brucella pinnipedialis M163/99/10]
gi|261738697|gb|EEY26693.1| ribosomal protein L25 [Brucella sp. F5/99]
gi|261742577|gb|EEY30503.1| 50S ribosomal protein L25 [Brucella suis bv. 5 str. 513]
gi|262553261|gb|EEZ09095.1| 50S ribosomal protein L25 [Brucella ceti M490/95/1]
gi|262766540|gb|EEZ12329.1| 50S ribosomal protein L25 [Brucella melitensis bv. 3 str. Ether]
gi|263002373|gb|EEZ14948.1| 50S ribosomal protein L25 [Brucella melitensis bv. 1 str. Rev.1]
gi|263093528|gb|EEZ17562.1| 50S ribosomal protein L25 [Brucella melitensis bv. 2 str. 63/9]
gi|264661372|gb|EEZ31633.1| 50S ribosomal protein L25 [Brucella pinnipedialis M292/94/1]
gi|306275146|gb|EFM56902.1| ribosomal protein L25, Ctc-form [Brucella inopinata BO1]
gi|306286723|gb|EFM58276.1| ribosomal protein L25, Ctc-form [Brucella sp. BO2]
gi|326409553|gb|ADZ66618.1| Ribosomal protein L25 [Brucella melitensis M28]
gi|326539259|gb|ADZ87474.1| ribosomal protein L25, Ctc-form [Brucella melitensis M5-90]
gi|340559602|gb|AEK54840.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
pinnipedialis B2/94]
gi|343383369|gb|AEM18861.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
1330]
gi|349743556|gb|AEQ09099.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
melitensis NI]
gi|358258794|gb|AEU06529.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella suis
VBI22]
gi|363400340|gb|AEW17310.1| large subunit ribosomal protein L25 [Brucella abortus A13334]
gi|374538556|gb|EHR10064.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI474]
gi|374543887|gb|EHR15365.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI435a]
gi|374544215|gb|EHR15692.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI486]
gi|374545392|gb|EHR16855.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI488]
gi|374548184|gb|EHR19636.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI010]
gi|374548612|gb|EHR20060.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI016]
gi|374558973|gb|EHR30362.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI259]
gi|374559986|gb|EHR31369.1| 50S ribosomal protein L25 [Brucella abortus bv. 1 str. NI021]
Length = 207
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 2 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 50 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E+D+S L+IGD V
Sbjct: 100 KSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSV 159
Query: 204 FMSDIEV 210
+S +++
Sbjct: 160 HISAVKL 166
>gi|161619480|ref|YP_001593367.1| 50S ribosomal protein L25/general stress protein Ctc [Brucella
canis ATCC 23365]
gi|260565969|ref|ZP_05836439.1| ribosomal protein L25 [Brucella suis bv. 4 str. 40]
gi|261755482|ref|ZP_05999191.1| 50S ribosomal protein L25 [Brucella suis bv. 3 str. 686]
gi|376275852|ref|YP_005116291.1| 50S ribosomal protein L25 [Brucella canis HSK A52141]
gi|189042347|sp|A9M6K0.1|RL25_BRUC2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|161336291|gb|ABX62596.1| ribosomal protein L25, Ctc-form [Brucella canis ATCC 23365]
gi|260155487|gb|EEW90567.1| ribosomal protein L25 [Brucella suis bv. 4 str. 40]
gi|261745235|gb|EEY33161.1| 50S ribosomal protein L25 [Brucella suis bv. 3 str. 686]
gi|363404419|gb|AEW14714.1| 50S ribosomal protein L25 [Brucella canis HSK A52141]
Length = 207
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 2 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 50 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E+D+S L+IGD V
Sbjct: 100 KSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSV 159
Query: 204 FMSDIEV 210
+S +++
Sbjct: 160 HISAVKL 166
>gi|424871724|ref|ZP_18295386.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393167425|gb|EJC67472.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 202
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPIAIALNTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T + + KVLP D +++ F+ T+
Sbjct: 52 TKRIHAGGFMTTVATIDVDG--------KKHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F E PGLK GG L +R ++ CPA+ I +D+S IGD + ++
Sbjct: 104 VTVEIPVHFINEEKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIA 163
Query: 207 DI 208
++
Sbjct: 164 EV 165
>gi|373450261|ref|ZP_09542282.1| 50S ribosomal protein L25 [Wolbachia pipientis wAlbB]
gi|371932534|emb|CCE77280.1| 50S ribosomal protein L25 [Wolbachia pipientis wAlbB]
Length = 203
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 39/220 (17%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A R+ + R +G IPAV++ K D + +
Sbjct: 8 TINAELRDVKKKKAMQALREKGSIPAVIYG-----KGHDNVNLT---------------- 46
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLD---SGK-----VLPIKVHRDEETGRILNLVFV 139
+ F Q ++G+ S+ L++ SGK V I+ H ++T + ++ FV
Sbjct: 47 -------LSAKEFTKQYKSGALSAHLIELDISGKKEYALVRDIQWHVVKDTVQHVDFQFV 99
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
D G+E+K+D+P+ F PG+K GG L + S+ C E I IE+D+S I
Sbjct: 100 --DKGSEIKIDIPLSFINEGKSPGIKLGGVLNVLCRSITVKCSPEKIPQVIEIDLSGKMI 157
Query: 200 GDRVFMSDIEVHPSWKLLS-KNEKMPLCKISATKLENPEP 238
G + ++D+++ K ++ + E + ISA + EP
Sbjct: 158 GQSIHINDVKLPEGVKFVAHEEENFTIVTISAADSDVEEP 197
>gi|163867941|ref|YP_001609145.1| 50S ribosomal protein L25 [Bartonella tribocorum CIP 105476]
gi|189042346|sp|A9IR85.1|RL25_BART1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|161017592|emb|CAK01150.1| 50S ribosomal protein L25 [Bartonella tribocorum CIP 105476]
Length = 209
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ + ++ P + E I
Sbjct: 5 YTLKAEKRERVGKGSSRELRRNGLIPAVIYGE--------KQPPLAITVPYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDG 144
+ F +T ++++LD K VLP D L++ F+
Sbjct: 51 FYKIHAGGFRTTI----------ATIVLDKQKIMVLPKDYQLDPVRDFPLHVDFLRISAK 100
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
+ ++V++PV F ++ PGLKKGG L +R ++ PA I IE+D+S+ IGD +
Sbjct: 101 SVVEVNIPVHFLNEDTAPGLKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIH 160
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISA 230
+S +++ + ++ + I+A
Sbjct: 161 ISAVQLPKDVTPIIQDRDFTIATIAA 186
>gi|417110749|ref|ZP_11963810.1| 50S ribosomal protein L25 [Rhizobium etli CNPAF512]
gi|327188360|gb|EGE55577.1| 50S ribosomal protein L25 [Rhizobium etli CNPAF512]
Length = 203
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPIAIALNTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ KVLP D +++ F+ T+
Sbjct: 52 TKRIHAGGFMTTVATIEVDG--------KKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F PGLK GG L +R ++ CPA+ I ++D+S IGD + +S
Sbjct: 104 VSVEIPVHFINEAKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFDIDLSGKKIGDSIHIS 163
Query: 207 DI 208
++
Sbjct: 164 EV 165
>gi|116253213|ref|YP_769051.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
leguminosarum bv. viciae 3841]
gi|424882645|ref|ZP_18306277.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WU95]
gi|115257861|emb|CAK08959.1| putative 50S ribosomal protein L25 [Rhizobium leguminosarum bv.
viciae 3841]
gi|392519008|gb|EIW43740.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 202
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPIAIALNTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T + + KVLP D +++ F+ T+
Sbjct: 52 TKRIHAGGFMTTVATIDVDG--------KKHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F E PGLK GG L +R ++ CPA+ I +D+S IGD + ++
Sbjct: 104 VTVEIPVHFINEEKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIA 163
Query: 207 DI 208
++
Sbjct: 164 EV 165
>gi|190892768|ref|YP_001979310.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli CIAT 652]
gi|190698047|gb|ACE92132.1| 50S ribosomal protein L25 [Rhizobium etli CIAT 652]
Length = 203
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 27 HTIQAIPRECTGSRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
+ ++A RE G + SAR+ R G IPAV++ D+++P + + E
Sbjct: 6 YELKAEARERVG-KGSARELRRNGLIPAVIYG--------DKQAPIAIALNTNE------ 50
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ K + F +T +++ KVLP D +++ F+ T
Sbjct: 51 VTKRIHAGGFMTTVATIEVDG--------KKYKVLPKDYQLDPVRDFTMHVDFLRVSGNT 102
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
++ V++PV F PGLK GG L +R ++ CPA+ I ++D+S IGD + +
Sbjct: 103 QVSVEIPVHFINEAKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFDIDLSGKKIGDSIHI 162
Query: 206 SDI 208
S++
Sbjct: 163 SEV 165
>gi|347757711|ref|YP_004865273.1| 50S ribosomal protein L25 [Micavibrio aeruginosavorus ARL-13]
gi|347590229|gb|AEP09271.1| ribosomal protein L25, Ctc-form [Micavibrio aeruginosavorus ARL-13]
Length = 212
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 76/182 (41%), Gaps = 28/182 (15%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
++ A R+ G ++ R + +IPAVV+ S E I L
Sbjct: 6 SLTAEKRDGAGKGIARALRRENKIPAVVYGD------------------SKEPVSITLPL 47
Query: 88 KSVELPFFCSTTFPLQIR---AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
K V L + F AG L ++ P+ T +I+++ F+
Sbjct: 48 KEVTLEYRKGYMFTHLCEIDVAGQKHLTLARDVQLHPV-------TDKIIHVDFLRVTPK 100
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
T +KVDVPV F E C GLK GG L + + C A I +EVD++N D+GD +
Sbjct: 101 TRIKVDVPVHFINDEECKGLKAGGVLNVVHHEVVLECAATDIPEFVEVDLTNYDLGDVIH 160
Query: 205 MS 206
M
Sbjct: 161 MD 162
>gi|241205729|ref|YP_002976825.1| 50S ribosomal protein L25 [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240859619|gb|ACS57286.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhizobium
leguminosarum bv. trifolii WSM1325]
Length = 202
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPIAIALNTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T + + KVLP D +++ F+ T+
Sbjct: 52 TKRIHAGGFMTTVATIDVDG--------KKHKVLPKDYQLDPVRDFTMHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F E PGLK GG L +R ++ CPA+ I +D+S IGD + ++
Sbjct: 104 VTVEIPVHFINEEKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIA 163
Query: 207 DI 208
++
Sbjct: 164 EV 165
>gi|114328980|ref|YP_746137.1| 50S ribosomal protein L25 [Granulibacter bethesdensis CGDNIH1]
gi|114317154|gb|ABI63214.1| LSU ribosomal protein L25P [Granulibacter bethesdensis CGDNIH1]
Length = 219
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/190 (23%), Positives = 90/190 (47%), Gaps = 22/190 (11%)
Query: 20 SRTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTE 79
S + + + I+A R G + R +G++PAV++ R++P ++ +
Sbjct: 4 SISMATFTQIEAEARSRAGKGAARATRREGKVPAVIYGA--------RQTPD---LIKLD 52
Query: 80 RKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFV 139
+ IH + + + S + + + S +++ D ++ H + ++ +
Sbjct: 53 PRIIH---RELNRGGWRSRLYEINVDGASTRALIRD------VQFHPVTDAPEHVDFQRL 103
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
A G ++V V V F+ + PGLK+GG L +R +++ LC +H+ E D+ LDI
Sbjct: 104 AA--GEPVRVAVAVQFQNEATSPGLKRGGVLNIVRHTVEVLCDPDHVPEHFEADLGTLDI 161
Query: 200 GDRVFMSDIE 209
GD + SD++
Sbjct: 162 GDNIRWSDLK 171
>gi|329851267|ref|ZP_08266024.1| ribosomal protein L25, Ctc-form [Asticcacaulis biprosthecum C19]
gi|328840113|gb|EGF89685.1| ribosomal protein L25, Ctc-form [Asticcacaulis biprosthecum C19]
Length = 198
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 34/183 (18%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQD------LLDKNTDRRSPSRKQILSTERKQIHSIL 87
RE TG+ + R+ G++P V++ D ++ N R+S LST + H
Sbjct: 11 RERTGTGGARATRNDGKLPGVLYGGDKGPVPIAVNLNAFRKS------LSTGKLNGHL-- 62
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
V L + T ++ A S +D V + VH D D+ ++
Sbjct: 63 --VTLKYGEETQ---KVIAKS-----IDFHPVTDVPVHFD----------LFRVDEHAKI 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
++ VPV FK E PGLKKGG L L+ PA+HI I +D++ L+IG V +SD
Sbjct: 103 RISVPVHFKNHELSPGLKKGGALNVAFHELEIQVPADHIPEDIIIDLTGLEIGQSVHISD 162
Query: 208 IEV 210
+++
Sbjct: 163 LKL 165
>gi|408787875|ref|ZP_11199601.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
lupini HPC(L)]
gi|424910946|ref|ZP_18334323.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|392846977|gb|EJA99499.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|408486339|gb|EKJ94667.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
lupini HPC(L)]
Length = 202
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G S R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSSRELRRNGLIPAVIYG--------DKQAPISIALSTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T + + G + KVLP D +++ F+ T
Sbjct: 52 TKRIHAGGFMTTVATIDV---DGKKI-----KVLPKDYQLDPVRDFTMHVDFLRVSGNTL 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F+ E +K GG L +R ++++ CPA I I VD+S L IGD V +S
Sbjct: 104 VNVEIPVHFENEEKS-DIKIGGVLNIVRHTVEFHCPANDIPEAITVDLSGLKIGDSVHIS 162
Query: 207 DIEV 210
++++
Sbjct: 163 NVKL 166
>gi|265984577|ref|ZP_06097312.1| 50S ribosomal protein L25 [Brucella sp. 83/13]
gi|306837764|ref|ZP_07470630.1| ribosomal protein L25, Ctc-form [Brucella sp. NF 2653]
gi|264663169|gb|EEZ33430.1| 50S ribosomal protein L25 [Brucella sp. 83/13]
gi|306407149|gb|EFM63362.1| ribosomal protein L25, Ctc-form [Brucella sp. NF 2653]
Length = 207
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 85/186 (45%), Gaps = 22/186 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 2 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 50 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E+D+S L+IGD V
Sbjct: 100 KSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSV 159
Query: 204 FMSDIE 209
+S ++
Sbjct: 160 HISAVK 165
>gi|430376071|ref|ZP_19430474.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
macacae 0408225]
gi|429541302|gb|ELA09330.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
macacae 0408225]
Length = 242
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 80/177 (45%), Gaps = 27/177 (15%)
Query: 35 ECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPF 94
+ G S R R Q ++PA+++ D K+ L+ + + ++KS++
Sbjct: 17 DAQGKGASRRLRKQNQVPAIIYGAD-------------KEPLAVALR-YNELIKSLQTEA 62
Query: 95 FCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVDV 151
F S + + V++ + P K +H D + RI+ G E+ V V
Sbjct: 63 FFSHILTINVEGHGTEEVVIKDLQRHPAKNTPMHADFQ--RIVR--------GQEMHVTV 112
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
P ++G + PG K+GG S T ++ C I I+VDVS++ IGD + + D+
Sbjct: 113 PFHYEGADVAPGHKEGGIFTSNATEIEVTCIPSKIPEFIKVDVSSMQIGDSIHLQDV 169
>gi|117924129|ref|YP_864746.1| 50S ribosomal protein L25 [Magnetococcus marinus MC-1]
gi|117607885|gb|ABK43340.1| LSU ribosomal protein L25P [Magnetococcus marinus MC-1]
Length = 198
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 88/191 (46%), Gaps = 20/191 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T + + RE G V+ + R QGRIPAVV+ + + S + L+ R I
Sbjct: 3 TFETVTREGLGKGVARKLRQQGRIPAVVYG-------AGKENISLEMNLNAFRVAI---- 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + P +T L + G +VL+ V R T ++ F+ D +
Sbjct: 52 -AGQGPTLFNTVHQLSVD-GKVENVLVRG-------VQRHPVTDLPEHVDFLRLDPTKMI 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VPV + + PGLK+GG ++ +R L+ C + +I +I VD + ++IG + + D
Sbjct: 103 TVHVPVHLRNEDQAPGLKRGGIIQIVRHELEIHCLSGNIPTEILVDCAEMEIGKSIHIED 162
Query: 208 IEVHPSWKLLS 218
I + K+ +
Sbjct: 163 ITLPEGTKVFT 173
>gi|218682558|ref|ZP_03530159.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli CIAT 894]
Length = 201
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPIAIALNTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ KVLP D +++ F+ T+
Sbjct: 52 TKRIHAGGFMTTVATIEVDG--------KKFKVLPKDYQLDPVRDFTMHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F E PG+K GG L +R ++ CPA+ I VD++ IGD + +S
Sbjct: 104 VTVEIPVHFINEEKSPGIKVGGVLNIVRHEVEVHCPADAIPEFFNVDLNGKKIGDSIHIS 163
Query: 207 DI 208
++
Sbjct: 164 EV 165
>gi|87200131|ref|YP_497388.1| 50S ribosomal protein L25 [Novosphingobium aromaticivorans DSM
12444]
gi|109893374|sp|Q2G6G9.1|RL25_NOVAD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|87135812|gb|ABD26554.1| LSU ribosomal protein L25P [Novosphingobium aromaticivorans DSM
12444]
Length = 204
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R+ G S R +GR PAV++ + + E K +++K
Sbjct: 7 LSAETRDRAGKGASRALRREGRTPAVIYGGN-----------EEPVAIHLEEK---ALVK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F ++ L + G +V + LP V T R + F+ + +
Sbjct: 53 ALGTGHFFNSVVELTV---GGQTV-----RTLPKDVAFHPVTDRPEHADFLRVSKDSVVH 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V+VPV+F E PGLKKGG L +R L+ +C + I I +DV+ ++GD + +S +
Sbjct: 105 VNVPVIFANEEKSPGLKKGGVLNIVRHELELVCAPDAIPDDIVIDVAGYEVGDSIHISAV 164
Query: 209 EVHPSWKLLSKNEKMPLCKISA 230
++ K + + I A
Sbjct: 165 KLPAGVKSAITDRDFTIATIVA 186
>gi|126731994|ref|ZP_01747797.1| ribosomal protein L25 [Sagittula stellata E-37]
gi|126707526|gb|EBA06589.1| ribosomal protein L25 [Sagittula stellata E-37]
Length = 209
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 88/202 (43%), Gaps = 22/202 (10%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+QA R TG + R G +P +VF D + P I + +LK
Sbjct: 8 LQAQERTGTGKGAARAARRDGMVPGIVFGGD--------KEPLAINI------PFNVLLK 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F ST F LQ+ V+ V RD ++ F+ +++
Sbjct: 54 RLKQGRFKSTLFNLQVEGHEDVRVICRD-------VQRDIVKDLPTHVDFMRLRRTSKVN 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ +PV F E+ PG++KGG L +R ++ + A I K+ VD+ N+ IGD V ++D+
Sbjct: 107 LFIPVEFINEETAPGIRKGGVLTVVRPEVELVVTAGDIPEKVVVDLGNMQIGDIVHINDV 166
Query: 209 EVHPSWKLLSKNEKMPLCKISA 230
+ P + + + ISA
Sbjct: 167 TL-PEGSKATIDRNFVIANISA 187
>gi|393719169|ref|ZP_10339096.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
echinoides ATCC 14820]
Length = 214
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 82/176 (46%), Gaps = 23/176 (13%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G S R +GR+PAV++ +++ P Q + E K + +L +
Sbjct: 12 REQVGKGASRLLRREGRVPAVIYG--------NKQDP---QSIHVEEKALMRLLMT---G 57
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ++ +++ G V + LP V D T R ++ F+ T + V VPV
Sbjct: 58 HFMNSVVMIEV---DGQQV-----RTLPKDVSFDAVTERPVHADFLRIGAHTTVHVSVPV 109
Query: 154 VFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VF E PG+K G G L I+ L+ +C A I I + ++ +IGD + +S++
Sbjct: 110 VFTDEEEAPGIKTGKGVLNIIQHELELVCDAAEIPDDITISLAGREIGDSIHISNV 165
>gi|379022730|ref|YP_005299391.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
canadensis str. CA410]
gi|376323668|gb|AFB20909.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
canadensis str. CA410]
Length = 204
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G+ + R +GR+PA+++ ++P +S E K+I +
Sbjct: 7 LEAQSRTEFGTGAARALRREGRVPAIIYGAG--------KTPVS---ISLEEKEITKYYR 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I KVLP V T + ++ FV+ ++ + K
Sbjct: 56 K---PAFISQLINLTIDK--------KQYKVLPKAVELHPVTDIVRHVDFVFLEEKKQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VPVV++G E G+K+GGY ++ + LC +I + +DV+N+ I + S I
Sbjct: 104 MEVPVVYEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLNSSKI 163
Query: 209 EVHPSWKLLSKNE 221
+ SK E
Sbjct: 164 VLPKGCSFASKKE 176
>gi|240850146|ref|YP_002971539.1| 50S ribosomal protein L25 [Bartonella grahamii as4aup]
gi|240267269|gb|ACS50857.1| 50S ribosomal protein L25 [Bartonella grahamii as4aup]
Length = 209
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ + ++ P + E I
Sbjct: 5 YTLKAEKRERVGKGSSRELRRNGLIPAVIYGE--------KQPPLAITVPYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDG 144
+ F +T ++++LD K VLP D L++ F+
Sbjct: 51 FYKIHAGGFRTTI----------ATIILDKQKIMVLPKDYQLDPVRDFPLHVDFLRISAK 100
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
+ ++V++PV F ++ PGLKKGG L +R ++ PA I IE+D+++ IGD +
Sbjct: 101 SVVEVNIPVHFLNEDTAPGLKKGGVLNIVRHEIECTAPASAIPEAIEIDLASYSIGDSIH 160
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISA 230
+S +++ + ++ + I+A
Sbjct: 161 ISAVQLPKDVTPIIQDRDFTIATIAA 186
>gi|15889503|ref|NP_355184.1| 50S ribosomal protein L25 [Agrobacterium fabrum str. C58]
gi|335033843|ref|ZP_08527207.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
sp. ATCC 31749]
gi|71153115|sp|Q8UDA0.1|RL25_AGRT5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|15157377|gb|AAK87969.1| 50S ribosomal protein L25 [Agrobacterium fabrum str. C58]
gi|333794728|gb|EGL66061.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
sp. ATCC 31749]
Length = 202
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G S R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSSRELRRNGLIPAVIYG--------DKQAPISIALSTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T + + G + KVLP D +++ F+ T
Sbjct: 52 TKRIHAGGFMTTVGTIDV---DGKKI-----KVLPKDYQLDPVRDFTMHVDFLRVSGNTL 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F+ E +K GG L +R ++++ CPA I I VD+S L IGD V +S
Sbjct: 104 VNVEIPVHFENEEKSD-IKIGGVLNIVRHTVEFHCPANDIPEAITVDLSGLKIGDSVHIS 162
Query: 207 DIEV 210
++++
Sbjct: 163 NVKL 166
>gi|157803533|ref|YP_001492082.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
canadensis str. McKiel]
gi|166223714|sp|A8EY64.1|RL25_RICCK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|157784796|gb|ABV73297.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
canadensis str. McKiel]
Length = 204
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G+ + R +GR+PA+++ ++P +S E K+I +
Sbjct: 7 LEAQSRTEFGTGAARALRREGRVPAIIYGAG--------KTPVS---ISLEEKEITKYYR 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I KVLP V T + ++ FV+ ++ + K
Sbjct: 56 K---PAFISQLINLTIDK--------KQYKVLPKAVELHPVTDIVRHVDFVFLEEKKQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VPVV++G E G+K+GGY ++ + LC +I + +DV+N+ I + S I
Sbjct: 104 MEVPVVYEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLNSSKI 163
Query: 209 EVHPSWKLLSKNE 221
+ SK E
Sbjct: 164 VLPKGCSFASKKE 176
>gi|400286564|ref|ZP_10788596.1| 50S ribosomal protein L25/general stress protein Ctc [Psychrobacter
sp. PAMC 21119]
Length = 229
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 24/187 (12%)
Query: 26 YHTIQAIPR--ECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
+ + A+ R E G S R R Q +PA+++ + P+ I +I
Sbjct: 5 HFELNAVDRSAEQQGKGASRRLRKQNLVPAIIYGGN--------EEPTSISI------KI 50
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
+ ++KS+E F S + + +V+ D + R G ++ F
Sbjct: 51 NELVKSLEFEAFFSHILTINVDGVEHQAVIKD--------LQRHPAKGFPMHADFQRIVK 102
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G ++ ++VPV F G E PG G L ++ + ++ +C + +EVDVS ++IGD
Sbjct: 103 GQKIHMNVPVHFTGREDAPGTAAAGVLSTLVSDIEIICLPSLLPEYLEVDVSGMEIGDLF 162
Query: 204 FMSDIEV 210
+SDI++
Sbjct: 163 RLSDIKL 169
>gi|395790756|ref|ZP_10470215.1| 50S ribosomal protein L25 [Bartonella alsatica IBS 382]
gi|395409052|gb|EJF75651.1| 50S ribosomal protein L25 [Bartonella alsatica IBS 382]
Length = 208
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 22/184 (11%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ + ++ P + E I
Sbjct: 5 YTLKAEIRERVGKGSSRELRRNGLIPAVIYGE--------KQPPLAITVPYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +TT + I G ++ VLP D L++ F+ +
Sbjct: 51 FYKIHAGGFRTTTATITI----GKEKIM----VLPKDYQLDPVRDFPLHVDFLRISAKSV 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++V++PV F ++ PGLKKGG L +R ++ PA I IE+D+S+ IGD + +S
Sbjct: 103 VEVNIPVHFLNEDTAPGLKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIHIS 162
Query: 207 DIEV 210
+++
Sbjct: 163 AVQL 166
>gi|118591923|ref|ZP_01549318.1| 50S ribosomal protein L25/general stress protein Ctc [Stappia
aggregata IAM 12614]
gi|118435566|gb|EAV42212.1| 50S ribosomal protein L25/general stress protein Ctc [Stappia
aggregata IAM 12614]
Length = 207
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 50/78 (64%)
Query: 133 ILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEV 192
++++ F+ G+ L V+VPV F E+CPG+KKGG L +R +++ PA++I +E+
Sbjct: 89 VMHVDFLRVSKGSTLTVEVPVHFLNEETCPGIKKGGVLNIVRHTVEMNVPADNIPEALEI 148
Query: 193 DVSNLDIGDRVFMSDIEV 210
D++ GD + +S +++
Sbjct: 149 DLAKAQPGDSLHISAVKL 166
>gi|456357714|dbj|BAM92159.1| 50S ribosomal protein L25 [Agromonas oligotrophica S58]
Length = 235
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ G ++V VP+ G E+ PG+K+GG + + +L
Sbjct: 74 RVIPRDFHLDPVKDFPIHVDFMRLGQGATIRVSVPLHVVGSEAAPGVKRGGTVNIVTHTL 133
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
C AE+I IE DVS L+I + +SD+++ K LS+++
Sbjct: 134 DLECLAENIPQFIEADVSALEINHSLHISDVKLPTGVKTLSRDD 177
>gi|56961862|ref|YP_173584.1| 50S ribosomal protein L25 [Bacillus clausii KSM-K16]
gi|68053067|sp|Q5WAD7.1|RL25_BACSK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56908096|dbj|BAD62623.1| ribosomal protein L25 family general stress protein [Bacillus
clausii KSM-K16]
Length = 218
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 40/200 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCST------- 98
R+QG +P V++ K++ S SVE F T
Sbjct: 21 RNQGHVPGVLYG-----------------------KKVKSTPVSVEAVAFLKTFRDVGQN 57
Query: 99 -TFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKG 157
F LQ+ G V++ ++ P+ + +++ F D E V+VPV +G
Sbjct: 58 GLFDLQLENGGKHHVMVQEVQIDPL-------NNQYMHVDFFEVDMNEERDVNVPVHLEG 110
Query: 158 VESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLL 217
PG K+GG + + + C I I VD+SNL+IGD + +SDI + ++
Sbjct: 111 --DAPGAKEGGIVNHLLYEITVHCLPADIPESITVDISNLNIGDSLSVSDIRANVPVTIV 168
Query: 218 SKNEKMPLCKISATKLENPE 237
+++++ + T E+P+
Sbjct: 169 NEDDETVVTVTPPTVTEDPD 188
>gi|403530240|ref|YP_006664769.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
quintana RM-11]
gi|403232312|gb|AFR26055.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
quintana RM-11]
Length = 208
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ D++ P + E I
Sbjct: 5 YTLKAELRERVGKGSSRELRRNGFIPAVIYG--------DKQPPLAIAVSYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T + + G ++ VLP D +++ F+ +
Sbjct: 51 FYKIYAGGFRTTVATIAV----GQQKIM----VLPKDYQLDPVRDFPIHVDFLRVSAQSV 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++V +PV F ++ PGLKKGG L +R ++ + PA I IE+D+SN IGD + +S
Sbjct: 103 VEVSIPVHFFNEDTAPGLKKGGVLNIVRHEIECIAPANAIPEAIEIDLSNYSIGDSIHIS 162
Query: 207 DIEVHPSWKLLSKNEKMPLCKISA 230
+++ + ++ + I+A
Sbjct: 163 AVKLPKDVTPVIQDRDFTIATIAA 186
>gi|451812698|ref|YP_007449151.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
gi|451778667|gb|AGF49547.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium blastocrithidii TCC012E]
Length = 209
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 22/187 (11%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
++ I A+ R+ G+ S R R +GR+PA+++ + S + + +++
Sbjct: 3 FFVEINAVLRDKHGTSASRRLRHEGRVPAIIYGGN-----------SLPMTMELDHNEVY 51
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
L+ + F S+ + I V+L S + P K ++L++ F D
Sbjct: 52 HALRKEK---FHSSILKIIINGKGTEQVILRSVQWHPYK-------QQVLHIDFQRIDSN 101
Query: 145 TELKVDVPVVFKGVESCPGLKKGG-YLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
E+ VP+ F E P +K GG ++ + T L C + + I+VD+S +++GD V
Sbjct: 102 QEISTRVPLHFLNEEISPAVKVGGAIIRHVITELDITCMPDLLPQFIDVDLSYVNLGDSV 161
Query: 204 FMSDIEV 210
+ DI++
Sbjct: 162 HLLDIKL 168
>gi|281412600|ref|YP_003346679.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga
naphthophila RKU-10]
gi|281373703|gb|ADA67265.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga
naphthophila RKU-10]
Length = 215
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 27/199 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQI-LSTERKQIHSI 86
+++A RE G R + R R G +PAVV+ P+ + I + +R + I
Sbjct: 3 SLEARVREVKGKREARRLRRSGEVPAVVYG------------PATEPIPVKIKRSVLEKI 50
Query: 87 LKSVELPFFCSTTFPLQ--IRAGSGSSVLLDSGKVLPIK-VHRDEETGRILNLVFVWADD 143
++ S P+Q I+ G++V + K + +K V RD+ + +++L F
Sbjct: 51 FHTI------SEATPIQLIIKDDQGNTV---AEKTVFLKMVQRDKVSETVVHLDFYEPTK 101
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G ++++VP K V G++KGG+L+ + + + +IEVDVS+LD+GD +
Sbjct: 102 GHRMRINVP--LKVVGKPVGVEKGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVI 159
Query: 204 FMSDIEVHPSWKLLSKNEK 222
D+++ K L + E+
Sbjct: 160 HARDLKLPEGVKCLLEEEE 178
>gi|170289080|ref|YP_001739318.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga
sp. RQ2]
gi|226736373|sp|B1LBD7.1|RL25_THESQ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|170176583|gb|ACB09635.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga
sp. RQ2]
Length = 215
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 98/199 (49%), Gaps = 27/199 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQI-LSTERKQIHSI 86
+++A RE G R + R R G +PAVV+ P+ + I + +R + I
Sbjct: 3 SLEARVREVKGKREARRLRRSGEVPAVVYG------------PATEPIPVKIKRSVLEKI 50
Query: 87 LKSVELPFFCSTTFPLQ--IRAGSGSSVLLDSGKVLPIK-VHRDEETGRILNLVFVWADD 143
++ S P+Q I+ G++V + K + +K V RD+ + +++L F
Sbjct: 51 FHTI------SEATPIQLIIKDDQGNTV---AEKTVFLKMVQRDKVSETVVHLDFYEPTK 101
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G ++++VP K V G++KGG+L+ + + + +IEVDVS+LD+GD +
Sbjct: 102 GHRMRINVP--LKVVGKPVGVEKGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVI 159
Query: 204 FMSDIEVHPSWKLLSKNEK 222
D+++ K L + E+
Sbjct: 160 HARDLKLPEGVKCLLEEEE 178
>gi|395778447|ref|ZP_10458959.1| 50S ribosomal protein L25 [Bartonella elizabethae Re6043vi]
gi|423715242|ref|ZP_17689466.1| 50S ribosomal protein L25 [Bartonella elizabethae F9251]
gi|395417655|gb|EJF83992.1| 50S ribosomal protein L25 [Bartonella elizabethae Re6043vi]
gi|395430078|gb|EJF96129.1| 50S ribosomal protein L25 [Bartonella elizabethae F9251]
Length = 209
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 34/210 (16%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ + ++ P ++ K+I
Sbjct: 5 YTLKAEKRERVGKGSSRELRRNGLIPAVIYGE--------KQPP---LAITVPYKEI--- 50
Query: 87 LKSVELPFFCSTTFPLQIRAG----SGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVW 140
F+ +I AG + ++++LD K VLP D L++ F+
Sbjct: 51 -------FY-------KIHAGGFRTTIATIVLDKQKIMVLPKDYQLDPVRDFPLHVDFLR 96
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
+ ++V++PV F ++ PG+KKGG L +R ++ PA I IE+D+S+ IG
Sbjct: 97 ISAKSVVEVNIPVHFLNEDTAPGIKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIG 156
Query: 201 DRVFMSDIEVHPSWKLLSKNEKMPLCKISA 230
D + +S +++ + ++ + I+A
Sbjct: 157 DSIHISAVQLPKDVTPIIQDRDFTIATIAA 186
>gi|448236354|ref|YP_007400412.1| 50S ribosomal protein L25 [Geobacillus sp. GHH01]
gi|445205196|gb|AGE20661.1| 50S ribosomal protein L25 [Geobacillus sp. GHH01]
Length = 210
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 44 RDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQ 103
R RSQG IPA+++ + + +K + F +
Sbjct: 20 RIRSQGGIPAILYGKKVENK----------------------------MIFVSTAELEKA 51
Query: 104 IRAGSGSSVLL-----DSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGV 158
+R G +S+L + VL ++ RD G +L+ F D TE+ +DV V G
Sbjct: 52 LREGGRTSLLTLKVGGEEHSVLLRELQRDPLRGELLHADFQAVDLSTEVDIDVEVRLVG- 110
Query: 159 ESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
PG+K GG L+ L +I P IEVD+S L +GD V + D++ +++
Sbjct: 111 -EAPGVKDGGVLQQNLHELSIRVLPANIPPVIEVDISGLQVGDTVTVGDVQTDGKFEI 167
>gi|220933713|ref|YP_002512612.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio sulfidophilus HL-EbGr7]
gi|254801065|sp|B8GLA7.1|RL25_THISH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|219995023|gb|ACL71625.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio sulfidophilus HL-EbGr7]
Length = 212
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 88/181 (48%), Gaps = 23/181 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+QA PR G S R R G++PA+++ + + P Q ++ + +++
Sbjct: 7 LQAEPRADQGKGASRRLRRAGKVPAILYGEG--------KDP---QPITLDHN---AVML 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++E F S +++ + ++L D V R IL+L + + ++
Sbjct: 53 NLEHEAFYSHILSVKLGGKAEKAILRD--------VQRHPCKPIILHLDLLRVSEDHAIR 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F ESC G+K GG + S + ++ C +H+ IEVDV++L++GD + +S
Sbjct: 105 VHVPLHFTNEESCVGVKTGGGMVSHQMVEVEVECLPKHLPEFIEVDVASLNVGDSLHLSQ 164
Query: 208 I 208
I
Sbjct: 165 I 165
>gi|150020070|ref|YP_001305424.1| 50S ribosomal protein L25/general stress protein Ctc [Thermosipho
melanesiensis BI429]
gi|166223727|sp|A6LJD8.1|RL25_THEM4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|149792591|gb|ABR30039.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermosipho
melanesiensis BI429]
Length = 216
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 27 HTIQAIPRECTGS-RVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
H ++A+ R G R R R QG IP VV+ D+ P +S ++ +
Sbjct: 4 HKLEALTRNVVGKKRAVRRLRKQGLIPGVVYGPDI--------EPLS---ISIKKSNLIK 52
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+L V ++ L ++ +G+ V S V + D+ T + ++ F + G
Sbjct: 53 LLYEVT----EASIISLSVKDETGNEVF--SHDVFIKNIQYDKLTDEVKHIDFYAPEKGH 106
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ +++P+ F G G++KGG ++ I L I K+E+D+SNLD+G+ +
Sbjct: 107 TMNINIPLEFIG--KPKGVEKGGIVEIIHHELPVETLPSVIVEKLEIDISNLDLGESFHV 164
Query: 206 SDIEVHPSWKLLSKNEKMPLCKIS 229
SD+++ P+ E PL I+
Sbjct: 165 SDLKL-PTGMTAELPENEPLVTIA 187
>gi|326387510|ref|ZP_08209118.1| 50S ribosomal protein L25/general stress protein Ctc
[Novosphingobium nitrogenifigens DSM 19370]
gi|326208014|gb|EGD58823.1| 50S ribosomal protein L25/general stress protein Ctc
[Novosphingobium nitrogenifigens DSM 19370]
Length = 202
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 86/197 (43%), Gaps = 22/197 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G S R +GR PAV++ D + P + E K ++ +++
Sbjct: 12 RERVGKGASRVLRREGRTPAVIYG--------DNQEPVAIHV---EEK---ALARALGTG 57
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ++ L + G +V+ + LP V T R + F+ + V VPV
Sbjct: 58 HFFNSIVELTV----GGTVV----RTLPKDVAFHPVTDRPEHADFLRLAADHAVHVKVPV 109
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
VF E+ PGLKKGG L + L+ + + I I VDV+ L++G + + DI +
Sbjct: 110 VFINEEASPGLKKGGVLNIVAHELELIATPDSIPDDITVDVTGLEVGASIHLKDIAIPAG 169
Query: 214 WKLLSKNEKMPLCKISA 230
K+++ + I A
Sbjct: 170 VKVVTHEADATIATIVA 186
>gi|239832418|ref|ZP_04680747.1| ribosomal protein L25, Ctc-form [Ochrobactrum intermedium LMG 3301]
gi|239824685|gb|EEQ96253.1| ribosomal protein L25, Ctc-form [Ochrobactrum intermedium LMG 3301]
Length = 277
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 71 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 118
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 119 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSA 168
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I ++VD++ L+IGD V
Sbjct: 169 KSVVHVNVPVHFKNEEAAPGIKRGGVLNIVRHDVELIVPANAIPEALDVDLTGLEIGDSV 228
Query: 204 FMSDIEV 210
+S I++
Sbjct: 229 HISAIKL 235
>gi|418407211|ref|ZP_12980529.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens 5A]
gi|358006355|gb|EHJ98679.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens 5A]
Length = 203
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G S R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSSRELRRNGLIPAVIYG--------DKQAPISIALSTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T + + G + KVLP D +++ F+ T
Sbjct: 52 TKRIHAGGFMTTVAVIDV---DGKKI-----KVLPKDYQLDPVRDFTMHVDFLRVSGNTL 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V+VPV F+ E +K GG L +R ++++ CPA I I VD+S L IGD V +S
Sbjct: 104 VNVEVPVHFENEEKSE-IKIGGVLNIVRHTVEFHCPANDIPEFITVDLSGLKIGDSVHIS 162
Query: 207 DIEV 210
++++
Sbjct: 163 NVKL 166
>gi|383774298|ref|YP_005453365.1| 50S ribosomal protein L25 [Bradyrhizobium sp. S23321]
gi|381362423|dbj|BAL79253.1| 50S ribosomal protein L25 [Bradyrhizobium sp. S23321]
Length = 242
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 89/195 (45%), Gaps = 26/195 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSI 86
++A R +G + +R G++P V++ Q L + D R R++IL+
Sbjct: 8 LKATARPKSGKGAARAERRAGKVPGVIYGNKQPPLPISVDDRE-LRQRILAGR------- 59
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
F +T + + +V+P H D +++ F+ +G
Sbjct: 60 --------FLTTLVDIDLDG--------KKHRVIPRDYHLDPVKDFPIHVDFMRLGEGAT 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+++ VP+ ES PG+K+GG + + +++ C E+I IEVDV L+IG + +S
Sbjct: 104 IRISVPLHVVKSESSPGVKRGGAVNIVAHAIELECGVENIPQFIEVDVGTLEIGHSLHLS 163
Query: 207 DIEVHPSWKLLSKNE 221
DI++ K L+ +
Sbjct: 164 DIKLPAGVKALTAED 178
>gi|325293585|ref|YP_004279449.1| 50S ribosomal protein L25 [Agrobacterium sp. H13-3]
gi|325061438|gb|ADY65129.1| 50S ribosomal protein L25/general stress protein CTC [Agrobacterium
sp. H13-3]
Length = 203
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G S R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSSRELRRNGLIPAVIYG--------DKQAPISIALSTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T + + G + KVLP D +++ F+ T
Sbjct: 52 TKRIHAGGFMTTVAVIDV---DGKKI-----KVLPKDYQLDPVRDFTMHVDFLRVSGNTL 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V+VPV F+ E +K GG L +R ++++ CPA I I VD+S L IGD V +S
Sbjct: 104 VNVEVPVHFENEEKSE-IKIGGVLNIVRHTVEFHCPANDIPEFITVDLSGLKIGDSVHIS 162
Query: 207 DIEV 210
++++
Sbjct: 163 NVKL 166
>gi|90422926|ref|YP_531296.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris BisB18]
gi|109893388|sp|Q219F9.1|RL25_RHOPB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|90104940|gb|ABD86977.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisB18]
Length = 240
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ +G ++V VP+ K E PG+K+GG + + ++
Sbjct: 74 RVIPRDFHLDPVRDFPIHVDFLRLGEGALIRVSVPLHLKNAEGAPGVKRGGTVNIVTHTV 133
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ AE I IE DVS LDIG + +SD+ + K LS+ +
Sbjct: 134 ELEAEAESIPQFIEADVSQLDIGSSLHLSDVVLPKGVKTLSRED 177
>gi|115378654|ref|ZP_01465804.1| ribosomal protein L25, Ctc-form [Stigmatella aurantiaca DW4/3-1]
gi|310823076|ref|YP_003955434.1| 50S ribosomal protein L25 [Stigmatella aurantiaca DW4/3-1]
gi|115364320|gb|EAU63405.1| ribosomal protein L25, Ctc-form [Stigmatella aurantiaca DW4/3-1]
gi|309396148|gb|ADO73607.1| 50S ribosomal protein L25 [Stigmatella aurantiaca DW4/3-1]
Length = 232
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 24/207 (11%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+++A RE +G + + R+QG +PAVV+ + L P + KQ
Sbjct: 7 SLEAKAREGSGKGAARKLRAQGLVPAVVYGKHL-------EKPVHVAVNPKAVKQ----- 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
++ P +T L++ + + +L D D + IL++ F+ D ++
Sbjct: 55 -AINTPHKFNTLIQLKLDSATHQVLLKD--------YQTDPLSREILHVDFIDVRDNEQV 105
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KV+VP+V G G GG L R L+ + I KIEVDV+ L I + ++D
Sbjct: 106 KVNVPLVLVG--KAVGTADGGLLTQARRELEVWALPQAIPEKIEVDVTPLKIAQALHIND 163
Query: 208 IEVHPSWKLLSKNEKMPLCKISATKLE 234
I++ P + N L +SA + E
Sbjct: 164 IKL-PQGVSVKTNVNYTLAVVSAPERE 189
>gi|260431160|ref|ZP_05785131.1| ribosomal protein L25, Ctc-form [Silicibacter lacuscaerulensis
ITI-1157]
gi|260414988|gb|EEX08247.1| ribosomal protein L25, Ctc-form [Silicibacter lacuscaerulensis
ITI-1157]
Length = 215
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 88/200 (44%), Gaps = 22/200 (11%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A+ R TG + + R G +P +VF D + P QI + + K +
Sbjct: 10 ALERTGTGKGAARQARRDGMVPGIVFGGD--------KDPLPIQI------PFNELFKRL 55
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
+ F ST + L++ V+ V RD +L + + + +
Sbjct: 56 KAGRFKSTLWNLKVEGHEDVRVICRD-------VQRDVVKDLPTHLDLMRLRRTSRIALY 108
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+PV F E+ PG+KKGG L +R ++ +C A I KI VD++ L+I D V +S +E+
Sbjct: 109 IPVEFINEEAAPGIKKGGVLTVVRPEVELVCTAGDIPEKITVDLTGLNINDVVTISSVEL 168
Query: 211 HPSWKLLSKNEKMPLCKISA 230
P+ + + + ISA
Sbjct: 169 -PNGTQPTIDRDFVIANISA 187
>gi|406938636|gb|EKD71827.1| hypothetical protein ACD_46C00088G0003 [uncultured bacterium]
Length = 235
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 90/182 (49%), Gaps = 22/182 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I+A R+ G S R R + ++P VV+ KN ++ E ++ K
Sbjct: 9 IEASVRQNMGKGASRRLRREEKVPGVVYGGG---KNAVS--------ITIEHNKMS---K 54
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++E+ F S L +R G+ +S +V+ V R RI+++ F +L
Sbjct: 55 ALEIEAFYSHI--LTLRTGT------ESERVILKDVQRHPFKPRIMHIDFQRVRADEKLH 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ +P+ FKG E+ PG+K+GG + I + ++ C +++ IE+D+S + + + +SDI
Sbjct: 107 MHIPLHFKGGENSPGVKEGGLISHIMSDIEVSCLPDNLPEYIELDISEMALNQILHLSDI 166
Query: 209 EV 210
++
Sbjct: 167 KL 168
>gi|89056087|ref|YP_511538.1| 50S ribosomal protein L25 [Jannaschia sp. CCS1]
gi|109893367|sp|Q28L99.1|RL25_JANSC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|88865636|gb|ABD56513.1| LSU ribosomal protein L25P [Jannaschia sp. CCS1]
Length = 216
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 82/182 (45%), Gaps = 21/182 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG + + R +G +P +V+ + P I + +LK ++
Sbjct: 13 RTGTGKGAARQARREGNVPGIVYGGGI--------DPLAINI------PFNVLLKRLKDG 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ST F +++ D +V+ V RD ++ F+ +++ + +PV
Sbjct: 59 RFLSTLFNMKVEG-------QDDVRVICRNVQRDVVKDLPTHVDFMRLKRTSKIALFIPV 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
G E CPGLKKGG L +R ++ A I +I +D++ L+IGD V +S +E+
Sbjct: 112 EVIGEEECPGLKKGGVLTMVRPEVELRVTAGDIPEQITIDLTGLEIGDTVTISSVELPAG 171
Query: 214 WK 215
K
Sbjct: 172 AK 173
>gi|304321414|ref|YP_003855057.1| 50S ribosomal protein L25 [Parvularcula bermudensis HTCC2503]
gi|303300316|gb|ADM09915.1| 50S ribosomal protein L25 [Parvularcula bermudensis HTCC2503]
Length = 212
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 82/177 (46%), Gaps = 33/177 (18%)
Query: 38 GSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCS 97
GSR RD G +PAV++ D N R + +LK+ +
Sbjct: 19 GSRAVRRD---GWVPAVLYGGDEEPLNIKLR--------------YNQVLKAYQTGRLID 61
Query: 98 TTFPLQIRAGS----GSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+++ G G + +D K LP R ++L+ V D T++ V+VP+
Sbjct: 62 VLAKIKLEGGEQQVIGRDIQVDPVKDLP----------RHVDLMRV--DARTKVTVNVPM 109
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
F E+CPGLKKGG L +R ++ + A +I +E D++ D+GD + +S +++
Sbjct: 110 RFLNEETCPGLKKGGVLNIVRHEVEVVASATNIPEALEADLAGADVGDTIHISAVKL 166
>gi|257455798|ref|ZP_05621024.1| ribosomal protein L25, Ctc-form [Enhydrobacter aerosaccus SK60]
gi|257446812|gb|EEV21829.1| ribosomal protein L25, Ctc-form [Enhydrobacter aerosaccus SK60]
Length = 241
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 27/179 (15%)
Query: 35 ECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPF 94
E G S R R Q +PA+V+ D + P+ I E ++KS+E
Sbjct: 16 ELQGKGASRRLRKQNLVPAIVYGAD--------KEPASIAIRYNE------LIKSLETES 61
Query: 95 FCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVDV 151
F S + + V++ + + P K +H D + RI+ G + + V
Sbjct: 62 FFSHILTINVEGQGTEEVVIKALQRHPAKNTPMHADFQ--RIVR--------GQAMHITV 111
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
PV + G E PG K GG S T L+ I + VDVS +++GD + + DI++
Sbjct: 112 PVHYVGAEDAPGHKAGGIFVSNATELEITAIPSKIPEYLTVDVSGMNVGDSIHLLDIQL 170
>gi|209550344|ref|YP_002282261.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|424918709|ref|ZP_18342073.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|209536100|gb|ACI56035.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhizobium
leguminosarum bv. trifolii WSM2304]
gi|392854885|gb|EJB07406.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 202
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPISIALNTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ KVLP D +++ F+ T+
Sbjct: 52 TKRIHAGGFMTTVATIEVDG--------KKYKVLPKDYQLDPVRDFTMHVDFLRVSANTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F E GLK GG L +R ++ CPA+ I VD+S IGD + +S
Sbjct: 104 VTVEIPVHFINEEKSQGLKVGGVLNIVRHEVEVHCPADAIPEFFNVDLSGKKIGDSIHIS 163
Query: 207 DI 208
++
Sbjct: 164 EV 165
>gi|424896232|ref|ZP_18319806.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393180459|gb|EJC80498.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 202
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPIAIALNTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ KVLP D +++ F+ T+
Sbjct: 52 TKRIHAGGFMTTVATIEVDG--------KKFKVLPKDYQLDPVRDFTMHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F E GLK GG L +R ++ CPA+ I VD+S IGD + +S
Sbjct: 104 VTVEIPVHFINEEKSQGLKVGGVLNIVRHQVEVHCPADAIPEFFNVDLSGKKIGDSIHIS 163
Query: 207 DI 208
++
Sbjct: 164 EV 165
>gi|339022201|ref|ZP_08646162.1| LSU ribosomal protein L25P [Acetobacter tropicalis NBRC 101654]
gi|338750780|dbj|GAA09466.1| LSU ribosomal protein L25P [Acetobacter tropicalis NBRC 101654]
Length = 205
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 64/123 (52%), Gaps = 7/123 (5%)
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
++K ++ + S + ++I G+ L+ ++ P+K +T ++ + + A G
Sbjct: 50 VIKGIQASGWRSRVYEIKIEGGATERALIRDIQLHPVK-----DTPEHVDFMRLAA--GQ 102
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ V+V V F G E PG+K+GG L +R +++ AEHI VD+S LDI D V
Sbjct: 103 RVTVEVSVHFSGEEKSPGIKRGGVLNIVRHTVEVEADAEHIPEFFSVDLSTLDINDNVRW 162
Query: 206 SDI 208
D+
Sbjct: 163 EDL 165
>gi|444312219|ref|ZP_21147812.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum
intermedium M86]
gi|443484471|gb|ELT47280.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum
intermedium M86]
Length = 208
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 2 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 50 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I ++VD++ L+IGD V
Sbjct: 100 KSVVHVNVPVHFKNEEAAPGIKRGGVLNIVRHDVELIVPANAIPEALDVDLTGLEIGDSV 159
Query: 204 FMSDIEV 210
+S I++
Sbjct: 160 HISAIKL 166
>gi|153008961|ref|YP_001370176.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum
anthropi ATCC 49188]
gi|404318683|ref|ZP_10966616.1| 50S ribosomal protein L25/general stress protein Ctc [Ochrobactrum
anthropi CTS-325]
gi|166223698|sp|A6WZE3.1|RL25_OCHA4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|151560849|gb|ABS14347.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ochrobactrum
anthropi ATCC 49188]
Length = 209
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A R G S R G+IPAV++ D++ P + E I
Sbjct: 5 YVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T +++ G + +VLP D ++ F+ +
Sbjct: 51 FYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSAKSV 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V+VPV FK E+ PG+K+GG L +R ++ + PA I +E D++ L+IGD V +S
Sbjct: 103 VHVNVPVHFKNEEAAPGIKRGGVLNIVRHDVELIVPANAIPEALEFDLTGLEIGDSVHIS 162
Query: 207 DIEVHPSWKLLSKNEKMPLCKISA 230
I++ ++ + I+A
Sbjct: 163 AIKLPKGVTAAIQDRDFTIATIAA 186
>gi|170740629|ref|YP_001769284.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium sp. 4-46]
gi|226736339|sp|B0UGY1.1|RL25_METS4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|168194903|gb|ACA16850.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium sp. 4-46]
Length = 217
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 23/181 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A+ R+ G + R QGR+PAV++ +SP Q +S + Q H ++
Sbjct: 7 LEAVARDRVGKGAARAVRRQGRVPAVIYGGG--------QSP---QSISLDANQTHHLIY 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F ST F + + G ++ + +P D L++ F+ G ++
Sbjct: 56 G---GGFLSTVFEIAV---DGRTI-----RAIPRDYQLDPVKDTPLHVDFLRVVSGQTIE 104
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V+VPV F ++ PGLK K G L + ++ + I + VD++ DIGD V +SD
Sbjct: 105 VEVPVHFVNQDAAPGLKQKSGTLNVVLHTITLAVSPDAIPDAVNVDLTGKDIGDTVHVSD 164
Query: 208 I 208
+
Sbjct: 165 L 165
>gi|346991774|ref|ZP_08859846.1| 50S ribosomal protein L25/general stress protein Ctc [Ruegeria sp.
TW15]
Length = 219
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 82/185 (44%), Gaps = 21/185 (11%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A+ R TG + + R G +P +VF D + P QI + + K +
Sbjct: 10 ALERTGTGKGAARQARRDGMVPGIVFGGD--------KDPLPIQI------PFNVLFKRL 55
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
+ F ST + L++ V+ V RD +L + T++ +
Sbjct: 56 KAGRFKSTLWNLKVEGHEDVRVICRD-------VQRDVVKDLPTHLDLMRLRRTTKIALF 108
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+PV F E+ PG+KKGG L +R ++ LC A I KI VD++ ++I D V +S +++
Sbjct: 109 IPVEFVNEEAAPGIKKGGVLTVVRPEVELLCTAGDIPEKITVDLTGMEINDVVTISSVDL 168
Query: 211 HPSWK 215
K
Sbjct: 169 PAGTK 173
>gi|49473974|ref|YP_032016.1| 50S ribosomal protein L25 [Bartonella quintana str. Toulouse]
gi|71153120|sp|Q6G0F8.1|RL25_BARQU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|49239477|emb|CAF25829.1| 50s ribosomal protein l25 [Bartonella quintana str. Toulouse]
Length = 208
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ D++ P + E I
Sbjct: 5 YTLKAELRERVGKGSSRELRRNGFIPAVIYG--------DKQPPLAIAVSYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T + + G ++ VLP D +++ F+ +
Sbjct: 51 FYKIYAGGFRTTVATIAV----GQQKIM----VLPKDYQLDPVRDFPIHVDFLRVSAQSV 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++V +PV F ++ PGLKKGG L +R ++ + PA I IE+D+SN IGD + +S
Sbjct: 103 VEVSIPVHFFNEDTAPGLKKGGVLNIVRHEIECIAPANAIPEAIEIDLSNYSIGDSIHIS 162
Query: 207 DIEVHPSWKLLSKNEKMPLCKISA 230
+++ + ++ + I+A
Sbjct: 163 VVKLPKDVTPVIQDRDFTIATIAA 186
>gi|220922771|ref|YP_002498073.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium nodulans ORS 2060]
gi|254801055|sp|B8IFN5.1|RL25_METNO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|219947378|gb|ACL57770.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium nodulans ORS 2060]
Length = 211
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A+ R+ G + R QGR+PAV++ +SP Q +S + Q H ++
Sbjct: 7 LEAVARDRVGKGAARAVRRQGRVPAVIYGGG--------QSP---QSISLDANQTHHLIY 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F +T F +++ G + + +P D L++ F+ G +
Sbjct: 56 GGG---FLTTVFEIEV---GGRKI-----RAIPRDYQLDPVKDLPLHVDFLRVTAGQTVA 104
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V+VPV F ++ PGLK K G L + ++ + I I+VD++ DIGD + +SD
Sbjct: 105 VEVPVHFVNQDAAPGLKQKSGMLNVVHHTVALEVSPDAIPDAIDVDLTGKDIGDTIHVSD 164
Query: 208 IEV 210
+ +
Sbjct: 165 LAL 167
>gi|190571325|ref|YP_001975683.1| 50S ribosomal protein L25/general stress protein Ctc [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|213018721|ref|ZP_03334529.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
gi|226694585|sp|B3CMB8.1|RL25_WOLPP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|190357597|emb|CAQ55038.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Culex quinquefasciatus Pel]
gi|212995672|gb|EEB56312.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Culex quinquefasciatus JHB]
Length = 203
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 39/213 (18%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A R+ + R +G IPAV++ K D + +
Sbjct: 8 TINAELRDVKKKKAMQALREKGSIPAVIYG-----KGHDNVNLT---------------- 46
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLD---SGK-----VLPIKVHRDEETGRILNLVFV 139
+ F Q ++G+ S+ L++ SGK V I+ H ++T + ++ FV
Sbjct: 47 -------LSAKEFTKQYKSGALSAHLIELDISGKKEYALVRDIQWHVVKDTVQHVDFQFV 99
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
D G+E+K+D+P+ F PG+K GG L + S+ C E I IE+D+S I
Sbjct: 100 --DKGSEIKIDIPLSFINESKSPGIKLGGVLNVLCRSITVKCSPEKIPQVIEIDLSGKMI 157
Query: 200 GDRVFMSDIEVHPSWKLLS-KNEKMPLCKISAT 231
G + ++D+++ K ++ + E + ISA
Sbjct: 158 GQSIHINDVKLPEGVKFVAHEEENFTIVTISAA 190
>gi|56418580|ref|YP_145898.1| 50S ribosomal protein L25 [Geobacillus kaustophilus HTA426]
gi|375006853|ref|YP_004980482.1| 50S ribosomal protein L25 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|68053036|sp|Q5L3U8.1|RL25_GEOKA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56378422|dbj|BAD74330.1| 50S ribosomal protein L25 [Geobacillus kaustophilus HTA426]
gi|359285698|gb|AEV17382.1| 50S ribosomal protein L25 [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 35/178 (19%)
Query: 44 RDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQ 103
R RSQG IPA+++ + + +K + F +
Sbjct: 20 RIRSQGGIPAILYGKKVENK----------------------------MIFVSTAELEKA 51
Query: 104 IRAGSGSSVLL-----DSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGV 158
+R G +S+L + VL ++ RD G +L+ F D TE+ +DV V G
Sbjct: 52 LREGGRTSLLTLKVGGEEHSVLLRELQRDPLRGHLLHADFQAVDMSTEVDIDVEVRLVG- 110
Query: 159 ESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
PG+K GG L+ L +I P IEVD+S L +GD V + D++ +++
Sbjct: 111 -EAPGVKDGGVLQQNLHELSIRVLPANIPPVIEVDISGLQVGDTVTVGDVKTDGKFEI 167
>gi|365882889|ref|ZP_09422075.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 375]
gi|365288782|emb|CCD94606.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 375]
Length = 189
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ G ++V VP+ G E PG+K+GG + + +L
Sbjct: 30 RVIPRDFHLDPVKDFPIHVDFMRLGQGATIRVSVPLHVVGSEGAPGVKRGGTVNIVTHTL 89
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
C AE+I IE DVS L+I + +SD+++ K LS+++
Sbjct: 90 DLECLAENIPQFIEADVSALEINHSLHISDVKLPTGVKTLSRDD 133
>gi|367471859|ref|ZP_09471458.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 285]
gi|365275834|emb|CCD83926.1| 50S ribosomal protein L25 [Bradyrhizobium sp. ORS 285]
Length = 189
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ G ++V VP+ G E PG+K+GG + + +L
Sbjct: 30 RVIPRDFHLDPVKDFPIHVDFMRLGQGATIRVSVPLHVVGSEGAPGVKRGGTVNIVTHTL 89
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
C AE+I IE DVS L+I + +SD+++ K LS+++
Sbjct: 90 DLECLAENIPQFIEADVSALEINHSLHISDVKLPTGVKTLSRDD 133
>gi|437999795|ref|YP_007183528.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
gi|429339029|gb|AFZ83451.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium blastocrithidii (ex Strigomonas
culicis)]
Length = 205
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 22/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A+ R+ G+ S R R +GR+PA+++ + S + + +++ L+
Sbjct: 3 INAVLRDKHGTSASRRLRHEGRVPAIIYGGN-----------SLPMTMELDHNEVYHALR 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F S+ + I V+L S + P K ++L++ F D E+
Sbjct: 52 KEK---FHSSILKIIINGKGTEQVILRSVQWHPYK-------QQVLHIDFQRIDSNQEIS 101
Query: 149 VDVPVVFKGVESCPGLKKGG-YLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VP+ F E P +K GG ++ + T L C + + I+VD+S +++GD V + D
Sbjct: 102 TRVPLHFLNEEISPAVKVGGAIIRHVITELDITCMPDLLPQFIDVDLSYVNLGDSVHLLD 161
Query: 208 IEV 210
I++
Sbjct: 162 IKL 164
>gi|407798258|ref|ZP_11145166.1| hypothetical protein OCGS_0239 [Oceaniovalibus guishaninsula
JLT2003]
gi|407059694|gb|EKE45622.1| hypothetical protein OCGS_0239 [Oceaniovalibus guishaninsula
JLT2003]
Length = 226
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 83/191 (43%), Gaps = 39/191 (20%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSI 86
IQA+ R TG + + R G +P +V+ D L N +++
Sbjct: 13 IQAMERTGTGKGAARQARRDGYVPGIVYGGGTDPLPINL----------------PYNAL 56
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLL-----DSGKVLP--IKVHRDEETGRILNLVFV 139
+K ++ F ST F L++ V+ D K LP + + R T R+ NL
Sbjct: 57 IKHLKAGRFLSTLFNLKVEGHEDVRVICRNVQRDVVKDLPTHVDLMRLRRTSRV-NLF-- 113
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
+PV G E PGLKKGG L +R ++ C A I KI DVS +DI
Sbjct: 114 -----------IPVELTGEEQSPGLKKGGVLTMVRPEVELRCTAGDIPEKIVGDVSQMDI 162
Query: 200 GDRVFMSDIEV 210
GD + +S +++
Sbjct: 163 GDTLTISMMQM 173
>gi|110634506|ref|YP_674714.1| 50S ribosomal protein L25/general stress protein Ctc [Chelativorans
sp. BNC1]
gi|123057768|sp|Q11GC6.1|RL25_MESSB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|110285490|gb|ABG63549.1| LSU ribosomal protein L25P [Chelativorans sp. BNC1]
Length = 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 94/195 (48%), Gaps = 36/195 (18%)
Query: 22 TTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERK 81
+ SY T +A RE G + R G+IPAV++ D++ P
Sbjct: 2 SQSYELTAEA--RERVGKGSARAIRRNGKIPAVIYG--------DKQPPL---------- 41
Query: 82 QIHSILKSVELPFFCSTTFPLQIRAG----SGSSVLLDSGK--VLPIKVHRDEETGRILN 135
S+ LP+ F L+I AG + +++ L+ K VLP D G ++
Sbjct: 42 -------SITLPY--KEVF-LRIHAGGFRTTVATIDLNGEKIQVLPKDYQLDPVRGFAMH 91
Query: 136 LVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVS 195
+ F+ T + V+VPV F E PG+K+GG L +R +++ CPA I IEVD++
Sbjct: 92 VDFLRVGKNTVVTVNVPVHFINDEKAPGIKRGGVLNIVRHEVEFTCPANAIPDFIEVDLT 151
Query: 196 NLDIGDRVFMSDIEV 210
LDIGD V +S +++
Sbjct: 152 GLDIGDSVHISAVKL 166
>gi|16124740|ref|NP_419304.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
crescentus CB15]
gi|221233455|ref|YP_002515891.1| 50S ribosomal protein L25/general stress protein Ctc [Caulobacter
crescentus NA1000]
gi|71153131|sp|Q9AAV8.1|RL25_CAUCR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801041|sp|B8GZU9.1|RL25_CAUCN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|13421662|gb|AAK22472.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
crescentus CB15]
gi|220962627|gb|ACL93983.1| LSU ribosomal protein L25P [Caulobacter crescentus NA1000]
Length = 197
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 48/69 (69%)
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
D+ +K++VPV FK E+ GLKKGG L+ IR +++ CPA+ I ++ +D++ DIGD
Sbjct: 97 DEHQLIKIEVPVHFKNHETSVGLKKGGTLEVIRHTVELACPADKIPEELVIDLAGHDIGD 156
Query: 202 RVFMSDIEV 210
+ +S++++
Sbjct: 157 VIRISEVKL 165
>gi|393765881|ref|ZP_10354441.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium sp. GXF4]
gi|392728773|gb|EIZ86078.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium sp. GXF4]
Length = 228
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 90/189 (47%), Gaps = 25/189 (13%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQI-LSTERKQ 82
S T++A+ R+ G + R QG++PAVV+ + P I L R
Sbjct: 2 SAVKTLEAVARDRVGKGAARAVRRQGQVPAVVYGGG--------QPPQSIAIDLVRARTL 53
Query: 83 IHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD 142
I++ F +T F +I+AG G +V + +P D +G L++ F+
Sbjct: 54 IYA-------GGFKTTLF--EIKAG-GKTV-----RAIPRDFQLDPVSGVPLHVDFLRVV 98
Query: 143 DGTELKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
G + V+VPV F + PG+KK GG L + +L + I IEVD++ +IGD
Sbjct: 99 SGQTVTVEVPVHFINEAAAPGIKKLGGTLNIVAHTLTLEVAPDQIPDAIEVDLTGREIGD 158
Query: 202 RVFMSDIEV 210
+ ++DI++
Sbjct: 159 VIHVADIKI 167
>gi|302388649|ref|YP_003824470.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermosediminibacter oceani DSM 16646]
gi|302199277|gb|ADL06847.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermosediminibacter oceani DSM 16646]
Length = 210
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 37/189 (19%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G R G++PAV + KN + R+ ++ + K++H +L
Sbjct: 5 TLTAEERKLAGKGTLNELRRNGKVPAVFYG-----KNIENRT------IAVDAKELHKLL 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLD---SGK---VLPIKVHRDEETGRILNLVFVWA 141
K+ G VL+D G+ V+ ++ RD G I ++ F
Sbjct: 54 KT------------------HGEGVLIDLVLGGEKHTVIIKEIQRDALKGDITHVDFFRV 95
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
+++VD+P+V KG G+K GG L+ L I +IEVD+S+L IGD
Sbjct: 96 SMTEKIEVDLPIVLKG--EPEGVKAGGVLQHQLHELTIEALPADIPEQIEVDISHLQIGD 153
Query: 202 RVFMSDIEV 210
+ + DI++
Sbjct: 154 VLMVKDIKL 162
>gi|170750343|ref|YP_001756603.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium radiotolerans JCM 2831]
gi|226736338|sp|B1LZ78.1|RL25_METRJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|170656865|gb|ACB25920.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium radiotolerans JCM 2831]
Length = 227
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 89/188 (47%), Gaps = 23/188 (12%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S T++A+ R+ G + R QG+IPAV++ Q ++ + +
Sbjct: 2 SAVKTLEAVARDRVGKGAARAVRRQGQIPAVIYG-----------GGQPPQSIAVDLIRT 50
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
+++ + F +T F +I AG G V + +P D TG L++ F+
Sbjct: 51 RTLIYA---GGFKTTLF--EINAG-GKKV-----RAIPRDFQLDPVTGVPLHVDFLRVVS 99
Query: 144 GTELKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDR 202
G + V+VPV F ++ PG+KK GG L + +L + I IEVD++ IGD
Sbjct: 100 GQTVTVEVPVHFVNEDAAPGIKKLGGTLNIVAHTLSLEVAPDQIPDAIEVDLTGRAIGDV 159
Query: 203 VFMSDIEV 210
+ +SDI++
Sbjct: 160 IHVSDIKI 167
>gi|442322502|ref|YP_007362523.1| 50S ribosomal protein L25 [Myxococcus stipitatus DSM 14675]
gi|441490144|gb|AGC46839.1| 50S ribosomal protein L25 [Myxococcus stipitatus DSM 14675]
Length = 226
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 90/183 (49%), Gaps = 23/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++A RE +G + R R+QG +PAVV+ + + + P ++ + K + +
Sbjct: 7 TLEAKSREGSGKGFARRLRAQGLVPAVVYGKHM-------QKPVH---IAVDPKAVRT-- 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
++ P +T L++ G+ VLL ++ P+ RD IL++ F+ + +
Sbjct: 55 -AINTPHKFNTLIQLKLADGT-HQVLLKDYQMDPVT--RD-----ILHVDFIGVRENEAV 105
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KV+VP+V G G+ GG L R L+ I +IE DV+ L I + + ++D
Sbjct: 106 KVNVPLVLTG--KAQGVADGGLLTQARRELEVWALPAAIPERIEADVTALKIAEAMHVND 163
Query: 208 IEV 210
I++
Sbjct: 164 IKL 166
>gi|338737774|ref|YP_004674736.1| 50S ribosomal protein L25 [Hyphomicrobium sp. MC1]
gi|337758337|emb|CCB64162.1| 50S ribosomal protein L25 [Hyphomicrobium sp. MC1]
Length = 237
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 22/204 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++A R G + + R G +PAV++ + +P T + + +
Sbjct: 6 TLKATARPRAGKGAARQARRNGNVPAVIYG--------NHETPE------TINLEYNELW 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K V F ST + + G+ VL +V P+ RD L++ F +
Sbjct: 52 KQVLRGHFTSTAIEIDVE-GTKHIVLARDVQVDPV---RDTP----LHVDFQRVGKDGVI 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+V +PV F PGLK+GG L +R ++ CP + I E+++ ++IG + +S
Sbjct: 104 RVSIPVHFTNETLSPGLKRGGVLNIVRHDVEVFCPYDKIPRAFEINLEGMEIGRSIHISA 163
Query: 208 IEVHPSWKLLSKNEKMPLCKISAT 231
+E+ + KN + I+
Sbjct: 164 VEMPEGVSPVIKNRDFTIATIAGA 187
>gi|379713618|ref|YP_005301956.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
massiliae str. AZT80]
gi|383481815|ref|YP_005390730.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
gi|376334264|gb|AFB31496.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
massiliae str. AZT80]
gi|378934154|gb|AFC72657.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rhipicephali str. 3-7-female6-CWPP]
Length = 203
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP V T + ++ FV+ ++ T+ K++VPVV++G E G+K+GGY ++ +
Sbjct: 74 KVLPKAVELHPVTDIVRHVDFVFLEEKTQ-KMEVPVVYEGKERALGVKRGGYFNIVKRRV 132
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
LC +I + +DV+N+ I + S IE+ ++K E
Sbjct: 133 TLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTKKE 176
>gi|384263337|ref|YP_005418525.1| 50S ribosomal protein L25 [Rhodospirillum photometricum DSM 122]
gi|378404439|emb|CCG09555.1| 50S ribosomal protein L25 [Rhodospirillum photometricum DSM 122]
Length = 261
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 91/214 (42%), Gaps = 27/214 (12%)
Query: 20 SRTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTE 79
S+ + T+ R+ G + R +G IP V++ R++P+ I
Sbjct: 59 SKIMTDIGTLAVKGRDRAGKGAARATRREGLIPGVIYG--------GRQAPALVAI---- 106
Query: 80 RKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNL 136
+L ++ F + F + + S V++ ++ P+ +H D
Sbjct: 107 --DPRVVLGEMKRAGFSTRLFDILVDGESAGRVMIHDVQMHPVTDMPIHAD--------- 155
Query: 137 VFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSN 196
F+ D TE+ V+VPV F PGLK+GG L +R ++ + + + +EVD++
Sbjct: 156 -FLRVDAETEVTVEVPVHFINETRSPGLKRGGVLNIVRHEVEVVGKPDLLPAALEVDLTG 214
Query: 197 LDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISA 230
L+I D V +S + + + LC I+A
Sbjct: 215 LEISDSVHISAVAIPAGVRPTITERDFTLCTIAA 248
>gi|383482451|ref|YP_005391365.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
montanensis str. OSU 85-930]
gi|378934805|gb|AFC73306.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
montanensis str. OSU 85-930]
Length = 190
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP V T + ++ FV+ ++ T+ K++VPVV++G E G+K+GGY ++ +
Sbjct: 74 KVLPKAVELHPVTDIVRHVDFVFLEEKTQ-KMEVPVVYEGKERALGVKRGGYFNIVKRRV 132
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
LC +I + +DV+N+ I + S IE+ ++K E
Sbjct: 133 TLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTKKE 176
>gi|421591137|ref|ZP_16036042.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium sp.
Pop5]
gi|403703468|gb|EJZ19690.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium sp.
Pop5]
Length = 202
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 84/183 (45%), Gaps = 24/183 (13%)
Query: 27 HTIQAIPRECTGSRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
+ ++A RE G + SAR+ R G IPAV++ D+++P + + E
Sbjct: 6 YELKAEARERVG-KGSARELRRNGLIPAVIYG--------DKQAPIAIALNTNE------ 50
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ K + F +T +++ KVLP D L++ F+ T
Sbjct: 51 VTKRIHAGGFMTTVATIEVDG--------KKYKVLPKDYQLDPVRDFTLHVDFLRVSGNT 102
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
++ V++PV F + GLK GG L +R ++ CPA+ I VD+S IGD + +
Sbjct: 103 QVTVEIPVHFINEDKSQGLKVGGVLNIVRHEVEVHCPADAIPEFFNVDLSGKKIGDSIHI 162
Query: 206 SDI 208
S++
Sbjct: 163 SEV 165
>gi|157964747|ref|YP_001499571.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
massiliae MTU5]
gi|157844523|gb|ABV85024.1| 50S ribosomal protein L25 [Rickettsia massiliae MTU5]
Length = 211
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP V T + ++ FV+ ++ T+ K++VPVV++G E G+K+GGY ++ +
Sbjct: 82 KVLPKAVELHPVTDIVRHVDFVFLEEKTQ-KMEVPVVYEGKERALGVKRGGYFNIVKRRV 140
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
LC +I + +DV+N+ I + S IE+ ++K E
Sbjct: 141 TLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTKKE 184
>gi|353328252|ref|ZP_08970579.1| 50S ribosomal protein L25/general stress protein Ctc [Wolbachia
endosymbiont wVitB of Nasonia vitripennis]
Length = 203
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 39/213 (18%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A R+ + R +G IPAV++ K D + +
Sbjct: 8 TINAELRDVKKKKAIQALREKGSIPAVIYG-----KGHDNVNLT---------------- 46
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLD---SGK-----VLPIKVHRDEETGRILNLVFV 139
+ F Q ++G+ S+ L++ SGK V I+ H ++T + ++ FV
Sbjct: 47 -------LSAKEFTKQYKSGALSAHLIELDISGKKEYALVRDIQWHVVKDTVQHVDFQFV 99
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
D G+E+K+D+P+ F PG+K GG L + S+ C E I IE+D+S I
Sbjct: 100 --DKGSEIKIDIPLSFINESKSPGIKLGGVLNVLCRSITVKCSPEKIPQLIEIDLSGKMI 157
Query: 200 GDRVFMSDIEVHPSWKLLS-KNEKMPLCKISAT 231
G + ++D+++ K ++ + E + ISA
Sbjct: 158 GQSIHINDVKLPEGVKFVAHEEENFTIVTISAA 190
>gi|255264479|ref|ZP_05343821.1| ribosomal protein L25, Ctc-form [Thalassiobium sp. R2A62]
gi|255106814|gb|EET49488.1| ribosomal protein L25, Ctc-form [Thalassiobium sp. R2A62]
Length = 213
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 21/187 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ R TG + + R G +P +V+ P I + + K
Sbjct: 8 LEVTARTGTGKGAARQARRDGLVPGIVYGGG--------EEPLAINI------PYNVLFK 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F ST F L++ D +V+ KV RD +L + T++
Sbjct: 54 KLKAGRFLSTLFNLKVEG-------HDDVRVICRKVQRDVVKDLPTHLDLMRLKRTTKIA 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ +PV F+G + CPG++KGG L +R ++ + A I K+ ++ L+IGD + +S I
Sbjct: 107 LFIPVEFEGEDDCPGIRKGGLLSVVRPEVELVVTAGDIPEKLTASIAGLEIGDTITISSI 166
Query: 209 EVHPSWK 215
E+ K
Sbjct: 167 ELPAGAK 173
>gi|406934997|gb|EKD69094.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 223
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 100/212 (47%), Gaps = 22/212 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+I+A R+ G+ + + +++GRIPA+++ + +L+ + +I
Sbjct: 5 SIKAEVRKSAGTSANNKLKTKGRIPAILYGRG-----------KESTMLTLTKLDFENIF 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K S F + ++++ D + PIK+ RI ++ F D+ ++
Sbjct: 54 KKNNKRAIYSVNFNDGAKDLVKNTLIKDI-QYDPIKM-------RITHVDFYEYDENKKI 105
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VPV+ G + GLKKGG L I+ ++ C +I EVDV+NLD+ + +SD
Sbjct: 106 RTRVPVLTHG--TPIGLKKGGILTHIKDQVEIDCLPINIPDHFEVDVTNLDVHHTIRVSD 163
Query: 208 IEVHPSWKLLSKNEKMPLCKISATKLENPEPA 239
+ V ++S + L +S ++E +PA
Sbjct: 164 LTVAKEIHVISDPHDV-LITVSMPRIEEEKPA 194
>gi|85716025|ref|ZP_01047002.1| Ribosomal protein L25 [Nitrobacter sp. Nb-311A]
gi|85697223|gb|EAQ35104.1| Ribosomal protein L25 [Nitrobacter sp. Nb-311A]
Length = 233
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ +G ++V VP+ + PG+K+GG + + ++
Sbjct: 74 RVIPRDFHLDPVKDFPIHVDFMRLGEGAAIRVSVPLRLLKADVAPGVKRGGTVNLVTHAI 133
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
C AE+I IE DV L+I + +SD+E+ P K L++ +
Sbjct: 134 DIECAAENIPQFIEADVGALEINHSLHLSDVELPPGVKTLARED 177
>gi|148253296|ref|YP_001237881.1| 50S ribosomal protein L25 [Bradyrhizobium sp. BTAi1]
gi|146405469|gb|ABQ33975.1| LSU ribosomal protein L25P [Bradyrhizobium sp. BTAi1]
Length = 201
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 56/104 (53%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ G ++V VP+ G E PG+K+GG + + +L
Sbjct: 43 RVIPRDFHLDPVKDFPIHVDFMRLGQGATIRVSVPLHVVGSEGAPGVKRGGTVNIVTHTL 102
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
C AE+I IE DVS L+I + +SD+++ K LS+ +
Sbjct: 103 DLECLAENIPQFIEADVSALEINHSLHISDVKLPTGVKTLSRED 146
>gi|49475908|ref|YP_033949.1| 50S ribosomal protein L25 [Bartonella henselae str. Houston-1]
gi|71153119|sp|Q6G2L2.1|RL25_BARHE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|49238716|emb|CAF27968.1| 50S ribosomal protein l25 [Bartonella henselae str. Houston-1]
Length = 206
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 34/190 (17%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ D++ P ++ K I
Sbjct: 5 YTLKAEIRERVGKGSSRELRRNGLIPAVIYG--------DKQPPLA---IAVSYKDI--- 50
Query: 87 LKSVELPFFCSTTFPLQIRAG----SGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVW 140
F+ +I AG + +++ +D K VLP D L++ F+
Sbjct: 51 -------FY-------KIHAGGFRTTVATLAIDKQKIMVLPKDYQLDPVRDFPLHVDFLR 96
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
+ ++V++PV F +S PGLKKGG L +R ++ PA I IE+D+S+ IG
Sbjct: 97 ISAKSIVEVNIPVHFLNEDSAPGLKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIG 156
Query: 201 DRVFMSDIEV 210
D + +S +++
Sbjct: 157 DSIHISAVQL 166
>gi|413950493|gb|AFW83142.1| hypothetical protein ZEAMMB73_241101 [Zea mays]
Length = 223
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 11/99 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A+PR +G V+A++R GR+PA+VF Q+ + ++R ++S QI ++
Sbjct: 105 ILAVPRASSGRHVAAKERKAGRVPAIVFEQENGQEGGNKR------LISVRANQIRKLVD 158
Query: 89 SVELPFFCSTTFPLQI---RAGSGSSVLLDSGKVLPIKV 124
+ FF S F LQ+ AG G L++S +VLP KV
Sbjct: 159 HLGRSFFLSRLFSLQVWSEHAGQGE--LIESVRVLPRKV 195
>gi|261417545|ref|YP_003251227.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus
sp. Y412MC61]
gi|297528420|ref|YP_003669695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. C56-T3]
gi|319765202|ref|YP_004130703.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. Y412MC52]
gi|261374002|gb|ACX76745.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. Y412MC61]
gi|297251672|gb|ADI25118.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. C56-T3]
gi|317110068|gb|ADU92560.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. Y412MC52]
Length = 210
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 35/178 (19%)
Query: 44 RDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQ 103
R RSQG IPA+++ + + +K + F +
Sbjct: 20 RIRSQGGIPAILYGKKVENK----------------------------MIFVSAAELEKV 51
Query: 104 IRAGSGSSVL-LDSG----KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGV 158
+R G +S+L L G VL ++ RD G +L+ F D TE+ +DV V G
Sbjct: 52 LREGGRTSLLTLKVGGEDYSVLLREMQRDPLRGELLHADFQAVDLSTEVDIDVEVRLVG- 110
Query: 159 ESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
PG+K GG L+ L +I P IEVD+S L +GD V + D++ +++
Sbjct: 111 -EAPGVKDGGVLQQNLHELSIRVLPANIPPVIEVDISGLQVGDTVTVGDVQTDGKFEI 167
>gi|229586949|ref|YP_002845450.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
africae ESF-5]
gi|379019404|ref|YP_005295638.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Hlp#2]
gi|379712673|ref|YP_005301012.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
philipii str. 364D]
gi|259646695|sp|C3PP47.1|RL25_RICAE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|228021999|gb|ACP53707.1| 50S ribosomal protein L25 [Rickettsia africae ESF-5]
gi|376329318|gb|AFB26555.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
philipii str. 364D]
gi|376331984|gb|AFB29218.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Hlp#2]
Length = 203
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP V T + ++ FV+ ++ T+ K++VPVV++G E G+K+GGY ++ +
Sbjct: 74 KVLPKAVELHPVTDIVRHVDFVFLEEKTQ-KMEVPVVYEGKERALGVKRGGYFNIVKRRV 132
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
LC +I I +DV+N+ + + S IE+ ++K E
Sbjct: 133 TLLCDVNNIPRNITIDVTNMPMATSLKSSKIELPKGCSFVTKKE 176
>gi|296532495|ref|ZP_06895212.1| 50S ribosomal protein L25 [Roseomonas cervicalis ATCC 49957]
gi|296267179|gb|EFH13087.1| 50S ribosomal protein L25 [Roseomonas cervicalis ATCC 49957]
Length = 214
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 82/187 (43%), Gaps = 21/187 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I+A RE G + R GR+PAV++ + +LS + + ++K
Sbjct: 7 IEAEARERAGKGAARATRKDGRVPAVIYG-----------AKQEAVLLSLDPR---DVMK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ + S + + + L+ + P+K L++ F G ++
Sbjct: 53 EMHKGGWQSHLYEVAVAGAEPVRCLMREVQFHPVK-------DSPLHVDFQRLAPGQMIR 105
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V VPVVF+ ES PG+K+GG L +R L+ L + + + E+D+ IGD + S++
Sbjct: 106 VKVPVVFQNEESAPGIKEGGVLNVVRRELEVLSDPDQVPEQFEIDLGAAVIGDSLRWSNV 165
Query: 209 EVHPSWK 215
H K
Sbjct: 166 IDHKGTK 172
>gi|424864508|ref|ZP_18288411.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86B]
gi|400759254|gb|EJP73436.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86B]
Length = 235
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 86/182 (47%), Gaps = 24/182 (13%)
Query: 29 IQAIPRECTGSRVSARDRS-QGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A RE TG+ + R+ G +PA+++ + K L+ + K ++ +
Sbjct: 7 LNADTRERTGTNKARVIRNVDGMVPAIIYG-------------NEKDSLNIKLK-LNELT 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K+ + F + ++ G KV+ ++ RD G+ L+ F+ T+L
Sbjct: 53 KASQNELFYTQVLIIKTEDGDE--------KVVLKELQRDPAKGKFLHADFLRVSRKTKL 104
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
KV +P F + C G+K +GG + ++ LC A I IEVDV++L IGD + ++
Sbjct: 105 KVVIPFTFLNEDDCEGVKTEGGVISKATREIEILCSAGDIPESIEVDVTSLMIGDAIRLT 164
Query: 207 DI 208
D+
Sbjct: 165 DL 166
>gi|196250765|ref|ZP_03149452.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. G11MC16]
gi|196209715|gb|EDY04487.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. G11MC16]
Length = 210
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 44 RDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQ 103
R RSQG IPAV++ + + +K + ++ L + HS++ T +
Sbjct: 20 RIRSQGGIPAVLYGKKVDNKMISISAADLEKALREGGR--HSLV-----------TLKVD 66
Query: 104 IRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPG 163
G SVLL +V RD G +L+ F D TE+ VDV V G PG
Sbjct: 67 ---GEDYSVLLR-------EVQRDPLRGELLHADFQAVDMSTEVDVDVEVRLVG--EAPG 114
Query: 164 LKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
+K GG L+ L +I P IEVD+S L +GD + + D++ ++++
Sbjct: 115 VKDGGVLQQNLHELSIRVLPANIPPAIEVDISGLQVGDVITVGDVQTGGTFEI 167
>gi|312109199|ref|YP_003987515.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. Y4.1MC1]
gi|336233593|ref|YP_004586209.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
thermoglucosidasius C56-YS93]
gi|423718316|ref|ZP_17692498.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
thermoglucosidans TNO-09.020]
gi|311214300|gb|ADP72904.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. Y4.1MC1]
gi|335360448|gb|AEH46128.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
thermoglucosidasius C56-YS93]
gi|383365252|gb|EID42551.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
thermoglucosidans TNO-09.020]
Length = 210
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 77/178 (43%), Gaps = 35/178 (19%)
Query: 44 RDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQ 103
R R QG IP +++ +++ +K + F + F
Sbjct: 20 RIRLQGNIPGILYGKNVENK----------------------------MIFVNGSDFQKT 51
Query: 104 IR-AGSGSSVLL----DSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGV 158
IR AG S + L + VL V RD G IL++ F D TE+ +DV + F G
Sbjct: 52 IREAGRHSLITLKLNDEEYSVLLRDVQRDSLRGNILHVDFQAVDMSTEVDIDVDIRFIG- 110
Query: 159 ESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
G+K GG L+ L +I P I++D+S+L IGD + + D++ +++
Sbjct: 111 -EAAGVKDGGVLQQNLHQLSIRVLPANIPPSIDIDISHLQIGDTITVGDVKTDGKYEI 167
>gi|115523456|ref|YP_780367.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodopseudomonas palustris BisA53]
gi|122297068|sp|Q07RP7.1|RL25_RHOP5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|115517403|gb|ABJ05387.1| LSU ribosomal protein L25P [Rhodopseudomonas palustris BisA53]
Length = 234
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 58/111 (52%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ +G ++V VP+ K E+ PG+K+GG + + ++
Sbjct: 74 RVIPRDFHLDPVRDFPVHVDFLRLGEGATIRVSVPLHLKNSETAPGVKRGGTVNIVTHTV 133
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKI 228
A+ I IE D+ LDIG + +SD+ + KL++ E + L I
Sbjct: 134 DLEAEADSIPQFIEADIGTLDIGTSLHLSDVVLPKGVKLVAAREDVTLVTI 184
>gi|90418284|ref|ZP_01226196.1| 50S ribosomal protein L25 [Aurantimonas manganoxydans SI85-9A1]
gi|90337956|gb|EAS51607.1| 50S ribosomal protein L25 [Aurantimonas manganoxydans SI85-9A1]
Length = 219
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 88/195 (45%), Gaps = 33/195 (16%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHS 85
T++A RE G + R G IPAV++ QD L P ++ L+ +
Sbjct: 6 TVKAEAREKVGKGAARHLRRNGMIPAVIYGDKQDPLPIAI----PYKETFLALHAGGFMT 61
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ ++E+ G SVL ++ P+ RD ++++ F+ + T
Sbjct: 62 HVATIEV-------------NGQKISVLPKDYQLEPV---RD----FLMHVDFLRVSEKT 101
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ V++PV F+ E+ PGLK+GG + +R ++ PA I +D++ L+IGD
Sbjct: 102 RVTVNIPVHFENEEASPGLKRGGVINVVRHEVEVHAPASAIPEYFTLDLTGLEIGDS--- 158
Query: 206 SDIEVHPSWKLLSKN 220
+H S L KN
Sbjct: 159 ----IHASALTLPKN 169
>gi|414168517|ref|ZP_11424480.1| 50S ribosomal protein L25, partial [Afipia clevelandensis ATCC
49720]
gi|410887253|gb|EKS35063.1| 50S ribosomal protein L25, partial [Afipia clevelandensis ATCC
49720]
Length = 217
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%)
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
L++ F+ G +++V VP+ G E PG+K+GG + + +++ EHI IEVD
Sbjct: 90 LHVDFLRLGAGAKIRVSVPLHVTGAEVSPGVKRGGTVNIVNHTVELEADVEHIPQFIEVD 149
Query: 194 VSNLDIGDRVFMSDIEVHPSWKLLSKNEKM 223
VS L+I + V +SD+++ K L ++ +
Sbjct: 150 VSKLEINNSVHLSDVQLPQGVKALRDDQTL 179
>gi|323136056|ref|ZP_08071139.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocystis
sp. ATCC 49242]
gi|322399147|gb|EFY01666.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylocystis
sp. ATCC 49242]
Length = 209
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 80/181 (44%), Gaps = 22/181 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R TG + R +GRIPAV++ +S ++K ++
Sbjct: 6 TLAATVRSGTGKGAARSVRREGRIPAVLYGGG-----------EAPLPISLDKKVTTQLI 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ F +T F L I + +P D L++ F+ G+ L
Sbjct: 55 FAGH---FLTTIFELDIDG--------KKERAIPRDYQLDVVKDFPLHVDFLRLKPGSRL 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KV+VPV F ++ PG+K+GG L + +++ PA++I I D++ +D D + +S
Sbjct: 104 KVNVPVHFINQDAAPGIKRGGSLNIVYHTVEMWVPADNIPEAITADLAGMDFNDSLHISA 163
Query: 208 I 208
I
Sbjct: 164 I 164
>gi|402489060|ref|ZP_10835864.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium sp.
CCGE 510]
gi|401812007|gb|EJT04365.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium sp.
CCGE 510]
Length = 202
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPIAIALNTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ KVLP D +++ F+ T+
Sbjct: 52 TKRIHAGGFMTTVATIEVDG--------KKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F PG+K GG L +R ++ CPA+ I VD++ IGD + +S
Sbjct: 104 VTVEIPVHFINEAKSPGIKVGGVLNIVRHEVEVHCPADAIPEFFNVDLNGKKIGDSIHIS 163
Query: 207 DI 208
++
Sbjct: 164 EV 165
>gi|338971774|ref|ZP_08627156.1| LSU ribosomal protein L25p [Bradyrhizobiaceae bacterium SG-6C]
gi|338235082|gb|EGP10190.1| LSU ribosomal protein L25p [Bradyrhizobiaceae bacterium SG-6C]
Length = 237
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%)
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
L++ F+ G +++V VP+ G E PG+K+GG + + +++ EHI IEVD
Sbjct: 90 LHVDFLRLGAGAKIRVSVPLHVTGAEVSPGVKRGGTVNIVNHTVELEADVEHIPQFIEVD 149
Query: 194 VSNLDIGDRVFMSDIEVHPSWKLLSKNEKM 223
VS L+I + V +SD+++ K L ++ +
Sbjct: 150 VSKLEINNSVHLSDVQLPQGVKALRDDQTL 179
>gi|217076515|ref|YP_002334231.1| 50S ribosomal protein L25/general stress protein Ctc [Thermosipho
africanus TCF52B]
gi|419761065|ref|ZP_14287325.1| 50S ribosomal protein L25/general stress protein Ctc [Thermosipho
africanus H17ap60334]
gi|226736370|sp|B7IFM6.1|RL25_THEAB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|217036368|gb|ACJ74890.1| ribosomal protein L25, Ctc-form [Thermosipho africanus TCF52B]
gi|407513746|gb|EKF48627.1| 50S ribosomal protein L25/general stress protein Ctc [Thermosipho
africanus H17ap60334]
Length = 217
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 87/189 (46%), Gaps = 28/189 (14%)
Query: 27 HTIQAIPRECTGSRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
HT++A+ R G + + R R QG +P VV+ D+ + LS S
Sbjct: 4 HTLEALVRSVVGKKRAVRRLRRQGFVPGVVYGPDV-------------EPLSI------S 44
Query: 86 ILKSVELPFFCSTT----FPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWA 141
I +S + F T L ++ +G V S V V D+ T + ++ F
Sbjct: 45 IKRSNLIKLFHEVTEASIISLTVKDENGKEVF--SHDVFIKNVQYDKLTDEVKHVDFYAP 102
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
+ G ++K+++P+ F G G +KGG L+ L + K+E+DVSNLD+G
Sbjct: 103 EKGHKMKINLPLEFVG--KAKGEEKGGVLEIHHHELPVETLPNAVVEKLEIDVSNLDLGQ 160
Query: 202 RVFMSDIEV 210
+++ D+++
Sbjct: 161 ALYVKDLKL 169
>gi|389876166|ref|YP_006369731.1| 50S ribosomal protein L25/general stress protein Ctc [Tistrella
mobilis KA081020-065]
gi|388526950|gb|AFK52147.1| 50S ribosomal protein L25/general stress protein Ctc [Tistrella
mobilis KA081020-065]
Length = 204
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
E++V+V V F +CPG+KKGG L +R ++ +C + I I VD++N IGD + +
Sbjct: 103 EIRVEVAVHFVNEATCPGIKKGGVLNVVRHEVEMICAPDAIPQSITVDLANAQIGDSIHI 162
Query: 206 SDIEVHPSWKLLSKNEKMPLCKISA 230
S +E+ + + + I+A
Sbjct: 163 SAVELPKGTRPAISDRDFTIATIAA 187
>gi|254491052|ref|ZP_05104233.1| ribosomal protein L25, Ctc-form [Methylophaga thiooxidans DMS010]
gi|224463565|gb|EEF79833.1| ribosomal protein L25, Ctc-form [Methylophaga thiooxydans DMS010]
Length = 240
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 80/180 (44%), Gaps = 21/180 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+QA R G S R R G+IPAVV+ D + P +S Q L+
Sbjct: 18 VQAEARTDEGKGASRRLRHAGKIPAVVYGAD--------KDPVS---ISINHNQF---LR 63
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F + L I AG V+L + P +I++ F+ D E+
Sbjct: 64 HLDEEAFYAHILTLDI-AGKKDQVVLKDLQRHPAN------DNKIIHADFLRVDAKHEMT 116
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ VPV F G + PG+K GG + + T ++ C + + IE D+S +++ + ++++
Sbjct: 117 MTVPVHFIGEDVAPGVKDGGQVSHMITEVEIACLPQDLPEYIEADISGMEMDGSLHLTEL 176
>gi|301092281|ref|XP_002996999.1| 50S ribosomal protein L25, putative [Phytophthora infestans T30-4]
gi|262112188|gb|EEY70240.1| 50S ribosomal protein L25, putative [Phytophthora infestans T30-4]
Length = 251
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 89/205 (43%), Gaps = 17/205 (8%)
Query: 5 CRTVQKVAHNSRTPFSRTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKN 64
R+ +VA S + + +Q + RE GSR S R R +G +P V++ + ++
Sbjct: 9 VRSGAQVARFSAAAAANQEVSSNVLQLVVREGEGSRASRRLRKKGLLPGVLYGEG--EEG 66
Query: 65 TDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKV 124
D R + ER+ + S+E F ++ G V K V
Sbjct: 67 KDERMLVSLPTRAFEREH-RKLWTSIENQVF-------HVQVGDHPPV-----KAYMRDV 113
Query: 125 HRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAE 184
D T L + F+ G V +P+ + E PGLK+GG++ I SL +
Sbjct: 114 QLDPVTDVPLAVNFLRFKPGR--TVSIPITYLNEEGSPGLKRGGFINHIHHSLDCTIFTD 171
Query: 185 HISPKIEVDVSNLDIGDRVFMSDIE 209
I +++DV+ L +GD+V++ I+
Sbjct: 172 KIPITLQIDVNGLHVGDKVYLESIK 196
>gi|414163818|ref|ZP_11420065.1| 50S ribosomal protein L25 [Afipia felis ATCC 53690]
gi|410881598|gb|EKS29438.1| 50S ribosomal protein L25 [Afipia felis ATCC 53690]
Length = 232
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 53/88 (60%)
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
L++ F+ +G ++V VP+ KG E PG+K+GG + + +++ EHI IEVD
Sbjct: 90 LHVDFLRLGEGATIRVSVPLHVKGAEVSPGVKRGGTVNIVNHTVELEADVEHIPQFIEVD 149
Query: 194 VSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
VS L+I + + +SD+ + K +S+++
Sbjct: 150 VSKLEINNSLHISDVALPKGVKPVSRDD 177
>gi|163851898|ref|YP_001639941.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium extorquens PA1]
gi|254561616|ref|YP_003068711.1| 50S ribosomal protein L25 [Methylobacterium extorquens DM4]
gi|226736336|sp|A9W5L4.1|RL25_METEP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|163663503|gb|ABY30870.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium extorquens PA1]
gi|254268894|emb|CAX24855.1| 50S ribosomal protein L25 (General stress protein CTC)
[Methylobacterium extorquens DM4]
Length = 228
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 86/189 (45%), Gaps = 25/189 (13%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQI-LSTERKQ 82
S T++A+ R+ G + R QG+IPAV++ + ++P I L R
Sbjct: 2 SATKTLEAVARDRVGKGAARAVRRQGQIPAVIYGGN--------QAPQAIAIDLIRARTL 53
Query: 83 IHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD 142
I++ F +T F +I AG + + +P D +G L++ F+
Sbjct: 54 IYA-------GGFKTTVF--EIDAGGKKT------RAIPRDYQLDPVSGVPLHVDFLRVV 98
Query: 143 DGTELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
G + VDVPV F + PG+K KGG L +L + I IEVD++ +IGD
Sbjct: 99 AGQTVTVDVPVHFVNEDQAPGIKQKGGTLNVALHTLSLEVAPDQIPDAIEVDLAGREIGD 158
Query: 202 RVFMSDIEV 210
+ SD+ +
Sbjct: 159 VIHASDLRL 167
>gi|357385214|ref|YP_004899938.1| 50S ribosomal protein L25 [Pelagibacterium halotolerans B2]
gi|351593851|gb|AEQ52188.1| LSU ribosomal protein L25p [Pelagibacterium halotolerans B2]
Length = 209
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 85/183 (46%), Gaps = 24/183 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTER-KQIHSIL 87
++A R+ G + R QG +PAV++ D+++P I + ++IH
Sbjct: 5 LKASVRDRVGKGAARELRRQGLVPAVIYG--------DKKAPLSIAISYKDTFRKIHD-- 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
F S + + D +V+P + ++++ F+ + L
Sbjct: 55 -----GGFLSHVIEIDVDG--------DKHRVIPKDYQLEPVRDFLVHVDFLRVGKNSTL 101
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V+VPV F+ E PGLKKGG L +R +++ PA+ I + VD+S ++GD + +S
Sbjct: 102 TVEVPVHFENQEKSPGLKKGGVLNVVRHTVEVTVPADSIPEYLVVDLSKSEVGDSLHISA 161
Query: 208 IEV 210
+++
Sbjct: 162 VDL 164
>gi|395789660|ref|ZP_10469170.1| 50S ribosomal protein L25 [Bartonella taylorii 8TBB]
gi|395428498|gb|EJF94574.1| 50S ribosomal protein L25 [Bartonella taylorii 8TBB]
Length = 208
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S +T++A RE G S R G IPAV++ + ++ P + E
Sbjct: 2 SKSYTLKAEIRERVGKGSSRELRRNGLIPAVIYGE--------KQPPLAIAVPYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T + I + VLP D L++ F+
Sbjct: 50 --IFHKIHAGGFRTTVATIAIGKQKVT--------VLPKDYQLDPVRDFPLHVDFLRISA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ ++V++PV F ++ PGLKKGG L +R ++ + PA I IE+D+S+ IGD +
Sbjct: 100 KSVVEVNIPVHFLNEDTAPGLKKGGVLNIVRHEIECIAPANAIPEAIEIDLSSYSIGDSI 159
Query: 204 FMSDIEV 210
+S +++
Sbjct: 160 HISAVQL 166
>gi|357976241|ref|ZP_09140212.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. KC8]
Length = 205
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 88/181 (48%), Gaps = 22/181 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A RE G S R +GR+PAV++ ++++ LS ++ +++
Sbjct: 6 NLSAETRERAGKGASRAVRREGRVPAVIYG-------------NKQEPLSIHVEE-KALV 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K++ F +T ++ +G + + LP V T R ++ F+ + T +
Sbjct: 52 KALSTGHFMNTVIMIE---ANGQQI-----RTLPKDVQFHPVTDRPQHVDFLRIGEHTTV 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V+VPVVF PG+K+GG L ++ ++ + A I ++++ + L++G+ + +S+
Sbjct: 104 HVNVPVVFTDEADAPGIKRGGVLNIVQHDIELVVDAALIPDEVKISLKGLEVGESIHISN 163
Query: 208 I 208
+
Sbjct: 164 V 164
>gi|238650660|ref|YP_002916512.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
peacockii str. Rustic]
gi|374319541|ref|YP_005066040.1| 50S ribosomal protein L25 [Rickettsia slovaca 13-B]
gi|383484256|ref|YP_005393169.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
parkeri str. Portsmouth]
gi|383751567|ref|YP_005426668.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
slovaca str. D-CWPP]
gi|259646696|sp|C4K1L3.1|RL25_RICPU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|238624758|gb|ACR47464.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
peacockii str. Rustic]
gi|360042090|gb|AEV92472.1| 50S ribosomal protein L25 [Rickettsia slovaca 13-B]
gi|378936610|gb|AFC75110.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
parkeri str. Portsmouth]
gi|379774581|gb|AFD19937.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
slovaca str. D-CWPP]
Length = 203
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP V T + ++ FV+ ++ T+ K++VPVV++G E G+K+GGY ++ +
Sbjct: 74 KVLPKAVELHPVTDIVRHVDFVFLEEKTQ-KMEVPVVYEGKERALGVKRGGYFNIVKRRV 132
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
LC +I + +DV+N+ + + S IE+ ++K E
Sbjct: 133 TLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTKKE 176
>gi|395765972|ref|ZP_10446562.1| 50S ribosomal protein L25 [Bartonella sp. DB5-6]
gi|395410707|gb|EJF77259.1| 50S ribosomal protein L25 [Bartonella sp. DB5-6]
Length = 208
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 48/77 (62%)
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
L++ F+ + ++V++PV F E+ PGLKKGG L +R ++ + PA I IE+D
Sbjct: 90 LHVDFLRISAKSVVEVNIPVHFLNEETAPGLKKGGVLNIVRHEIECIAPANAIPEAIEID 149
Query: 194 VSNLDIGDRVFMSDIEV 210
+S+ IGD + +S +++
Sbjct: 150 LSSYSIGDSIHISAVQL 166
>gi|451942267|ref|YP_007462904.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
gi|451901654|gb|AGF76116.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
vinsonii subsp. berkhoffii str. Winnie]
Length = 208
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 92/204 (45%), Gaps = 22/204 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S+ R G IPA+++ + ++ P + E I
Sbjct: 5 YTLKAEIRERVGKGSSSELRRNGLIPAIIYGE--------KQPPLAITVPYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T L I G + VLP D L++ F+ + +
Sbjct: 51 FYKIHAGGFRTTIATLVI----GKQKI----TVLPKDYQLDPVRDFPLHVDFLRISEKSV 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++V++PV F ++ PGLKKGG L +R ++ PA I IE+D+++ IGD + +S
Sbjct: 103 VEVNIPVHFLNEDTAPGLKKGGVLNIVRHEIECTAPANAIPEAIEIDLASYSIGDSIHIS 162
Query: 207 DIEVHPSWKLLSKNEKMPLCKISA 230
+++ + ++ + I+A
Sbjct: 163 AVQLPEGVTPVIQDRDFTIATIAA 186
>gi|395788365|ref|ZP_10467929.1| 50S ribosomal protein L25 [Bartonella birtlesii LL-WM9]
gi|395408282|gb|EJF74893.1| 50S ribosomal protein L25 [Bartonella birtlesii LL-WM9]
Length = 208
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ + ++ P + E I
Sbjct: 5 YTLKAEIRERVGKGSSRELRRNGLIPAVIYGE--------KQPPLAITVPYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T + I G ++ VLP D L++ F+ +
Sbjct: 51 FYKIHAGGFRTTVATITI----GKEKIM----VLPKDYQLDPVRDFPLHVDFLRISAKSV 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++V++PV F ++ PGLKKGG L +R ++ PA I IE+D+S+ IGD + +S
Sbjct: 103 VEVNIPVHFLNEDTAPGLKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIHIS 162
Query: 207 DIEVHPSWKLLSKNEKMPLCKISA 230
+++ + ++ + I+A
Sbjct: 163 AVQLPKDVTPVIQDRDFTIATIAA 186
>gi|406946700|gb|EKD77822.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 244
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 82/179 (45%), Gaps = 22/179 (12%)
Query: 30 QAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKS 89
+A R+ TG + R R + R+PA+++ + K+ + + ++K+
Sbjct: 8 EAQARQSTGKPAARRLRREDRVPAILYG-------------AGKEPMPISLSH-NKVIKA 53
Query: 90 VELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKV 149
+E S L + G+ V+L + P K +I+++ F+ + ++ +
Sbjct: 54 LEHEAIYSHILTLNVE-GASEKVVLKALMRHPTK-------PKIMHMDFLRINTKEKIHM 105
Query: 150 DVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VP+ F G PGLK GG L + T L+ C + IEVDVS L IGD + +S I
Sbjct: 106 RVPLHFLGEAKSPGLKDGGVLSKLITHLEITCLPLDLPEFIEVDVSGLTIGDSIHLSVI 164
>gi|157828786|ref|YP_001495028.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165933514|ref|YP_001650303.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Iowa]
gi|378721608|ref|YP_005286495.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Colombia]
gi|378722955|ref|YP_005287841.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Arizona]
gi|378724309|ref|YP_005289193.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Hauke]
gi|379016146|ref|YP_005292381.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Brazil]
gi|379018095|ref|YP_005294330.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Hino]
gi|166223715|sp|A8GSZ5.1|RL25_RICRS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189042367|sp|B0BUI7.1|RL25_RICRO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|157801267|gb|ABV76520.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. 'Sheila Smith']
gi|165908601|gb|ABY72897.1| LSU ribosomal protein L25P [Rickettsia rickettsii str. Iowa]
gi|376324670|gb|AFB21910.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Brazil]
gi|376326632|gb|AFB23871.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Colombia]
gi|376327979|gb|AFB25217.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Arizona]
gi|376330661|gb|AFB27897.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Hino]
gi|376333324|gb|AFB30557.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
rickettsii str. Hauke]
Length = 203
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP V T + ++ FV+ + T+ K++VPVV++G E G+K+GGY ++ +
Sbjct: 74 KVLPKAVELHPVTDIVRHVDFVFLEKKTQ-KMEVPVVYEGKERALGVKRGGYFNIVKRRV 132
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
LC +I I +DV+N+ + + S IE+ ++K E
Sbjct: 133 TLLCDVNNIPRNITIDVTNMPMATSLKSSKIELPKGCSFVTKKE 176
>gi|296134847|ref|YP_003642089.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomonas
intermedia K12]
gi|410692376|ref|YP_003622997.1| putative 50S ribosomal protein L25 (General stress protein CTC)
rplY [Thiomonas sp. 3As]
gi|294338800|emb|CAZ87134.1| putative 50S ribosomal protein L25 (General stress protein CTC)
rplY [Thiomonas sp. 3As]
gi|295794969|gb|ADG29759.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thiomonas
intermedia K12]
Length = 205
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 86/183 (46%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R G+ P +++ + ++P Q++ + ++ LK
Sbjct: 3 VVAFERSLQGTGASRRLRRAGKTPGIIYGGE--------QAP---QMIELDHNALYHALK 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F S+ L+I AG S VLL ++ P K +L++ F D G ++
Sbjct: 52 KEQ---FHSSVLQLEI-AGKSSQVLLRDYQMHPFK-------QLVLHVDFQRVDAGHKIS 100
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VP+ F G E+ P +K G + + T ++ C + IEVD+S L + V ++D
Sbjct: 101 MKVPLHFTGAENSPAVKLSHGLVNHVMTEVEVSCLPSELPEFIEVDLSELVLHQSVHVND 160
Query: 208 IEV 210
+++
Sbjct: 161 LKL 163
>gi|85707110|ref|ZP_01038198.1| ribosomal protein L25 [Roseovarius sp. 217]
gi|85668396|gb|EAQ23269.1| ribosomal protein L25 [Roseovarius sp. 217]
Length = 208
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+QA R TG + R +G +P +VF D + P I +++LK
Sbjct: 8 LQAQERAGTGKGAARAARREGMVPGIVFGGD--------KEPLPINI------PFNALLK 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F ST F LQ+ D +V+ V RD ++ + T +
Sbjct: 54 RLKKGRFKSTLFNLQVEGQ-------DDVRVICRDVQRDVVKDLPTHVDLMRLRRTTRIN 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLD-IGDRVFMSD 207
+ + V F E+CP L+KGG L +R ++ A I + VD+S + IGD V +S
Sbjct: 107 LFIHVDFINHENCPALRKGGVLTVVRNEVELTVTAGDIPDHLTVDLSKISKIGDVVTISM 166
Query: 208 IEVHPSWKLLSKNEKMPLCKISA 230
I++ + + K+ +C ISA
Sbjct: 167 IDLPEGSEPVIKDRDFVICNISA 189
>gi|365898281|ref|ZP_09436247.1| 50S ribosomal protein L25 [Bradyrhizobium sp. STM 3843]
gi|365420969|emb|CCE08789.1| 50S ribosomal protein L25 [Bradyrhizobium sp. STM 3843]
Length = 233
Score = 56.6 bits (135), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 56/106 (52%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D L++ F+ G ++V VP+ E+ PG+K+GG + + +L
Sbjct: 74 RVIPRDFHLDPVKDFPLHVDFMRLGQGATIRVSVPLHVVNAETSPGVKRGGTVNIVTHTL 133
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKM 223
+ C AE+I IE DV L+I + + MSD+++ K L + +
Sbjct: 134 ELECLAENIPQYIEADVGGLEINNSLHMSDVKLPTGVKPLRGDATL 179
>gi|436843123|ref|YP_007327501.1| 50S ribosomal protein L25 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
gi|432172029|emb|CCO25402.1| 50S ribosomal protein L25 [Desulfovibrio hydrothermalis AM13 = DSM
14728]
Length = 197
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 25/190 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T +A R TG + + R+ G IPAV ++Q+ LS +
Sbjct: 6 TFKAEVRTKTGKCANRQLRNTGMIPAVFYSQE-----------GENITLSVNEIDFAKMF 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
++ + F L I + +++ KV D R+ ++ F+ L
Sbjct: 55 RTTG----TTRLFSLDIDGKTYDTLVW--------KVQMDPVRPRVNHIDFLGVAKDKPL 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
K++VPV +G+ PG+K GG + R L C A I I ++VSN+++GD VF+++
Sbjct: 103 KIEVPVTTEGL--APGVKLGGRMAIYRDKLTVACTAATIPAAIVINVSNMNVGDTVFVNE 160
Query: 208 IEVHPSWKLL 217
+E+ ++
Sbjct: 161 VELGEGASII 170
>gi|332188364|ref|ZP_08390089.1| ribosomal protein L25, Ctc-form [Sphingomonas sp. S17]
gi|332011593|gb|EGI53673.1| ribosomal protein L25, Ctc-form [Sphingomonas sp. S17]
Length = 205
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 82/183 (44%), Gaps = 26/183 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G S R +GR+PAV++ Q+ + I E+ + +++
Sbjct: 6 TLAAETRDQVGKGASRSLRREGRVPAVIYGQN----------KAAASIHLEEKALVKALM 55
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
FF S +++D + L V T R L++ F+ + +
Sbjct: 56 TG---HFFTSV-------------IMVDGQRTLAKDVAFHPVTDRPLHVDFLRIGEHETV 99
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VPVVF + G+K+GG L R ++ + A I +I + + L++GD + +SD
Sbjct: 100 TVAVPVVFTDEDESRGIKQGGVLNVTRHEIEIVVDAADIPAEITISLKGLEVGDSIHISD 159
Query: 208 IEV 210
+++
Sbjct: 160 VKL 162
>gi|288942090|ref|YP_003444330.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Allochromatium vinosum DSM 180]
gi|288897462|gb|ADC63298.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Allochromatium vinosum DSM 180]
Length = 201
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 81/180 (45%), Gaps = 22/180 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A PR TG+ S R R G +PA+V+ + P + E +LK
Sbjct: 7 VNAQPRTGTGTGASRRLRRTGLVPAIVYGA--------HQDPEMVSVSHNE------LLK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+E F S L++ D KV+ + R IL++ F+ +LK
Sbjct: 53 HLEHEAFYSHVLDLKVGD--------DVTKVVLKDMQRHPAKPFILHVDFMRVSQDEKLK 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ VP+ F ++C G+K GG + T ++ +C + + I VD++ ++IG V +S++
Sbjct: 105 MVVPLHFLNEDTCKGVKLGGVVSHTITEVEIVCLPQDLPEFIGVDMAEMEIGSIVHLSEL 164
>gi|418297121|ref|ZP_12908963.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens CCNWGS0286]
gi|355538219|gb|EHH07466.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens CCNWGS0286]
Length = 202
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G S R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSSRELRRNGLIPAVIYG--------DKQAPISIALSTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T + + G + KVLP D +++ F+ T
Sbjct: 52 TKRIHAGGFMTTVAIIDV---DGKKI-----KVLPKDYQLDPVRDFTMHVDFLRVSGNTL 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V+VPV F E +K GG L +R ++++ CPA I I VD++ L IGD V +S
Sbjct: 104 VNVEVPVHFVNEEKSD-IKIGGVLNIVRHTVEFHCPANDIPEFITVDLAGLKIGDNVHIS 162
Query: 207 DIEV 210
++++
Sbjct: 163 NVKL 166
>gi|407472631|ref|YP_006787031.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
acidurici 9a]
gi|407049139|gb|AFS77184.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
acidurici 9a]
Length = 208
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 92/213 (43%), Gaps = 30/213 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ + RE GSR S R R+ G IPAV++ + + + + K+I RK + L
Sbjct: 3 VNCVAREDKGSRKSGRLRTAGYIPAVIYGSNFSNHVI---ALNDKEIREALRKLGENALV 59
Query: 89 SVELPFFCSTTFPLQI-RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
VE+ T I R G+ K+L I + + T RI
Sbjct: 60 KVEIDGKLETAMIKDIQRVPVGN-------KILHIDLQQVSSTERI-------------- 98
Query: 148 KVDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+V VP++ G E LK G L+ L C A I I +DVS+L +GD +S
Sbjct: 99 QVQVPIILVGRE----LKANEGVLQQQLDGLDIDCLAVDIPRNITIDVSHLGVGDSFTVS 154
Query: 207 DIEVHPSWKLLSKNEKMPLCKISATKLENPEPA 239
DI+V + +++ E++ ++AT E E
Sbjct: 155 DIKVEGDFTIVNDGEEVIASIVAATMQEEAEDG 187
>gi|451811971|ref|YP_007448425.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium galatii TCC219]
gi|451777873|gb|AGF48821.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium galatii TCC219]
Length = 205
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 22/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A+ R+ G+ S R R GR+PA+++ S + + +I+ L+
Sbjct: 3 INALLRDMHGTSASRRLRHVGRVPAIIYG-----------GSSLPMTIELDHNEIYHALR 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F S+ + I V+L S + P K ++L++ F + E+
Sbjct: 52 KEK---FHSSILKITINNKGTEQVILRSVQWHPYK-------QQVLHIDFQRVESNQEIS 101
Query: 149 VDVPVVFKGVESCPGLKKGG-YLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VP+ F + P +K GG ++ + T L C + I+VD+S + +GD V +SD
Sbjct: 102 TKVPLHFLNEDISPAVKVGGAIIRHVMTELDITCMPALLPQFIDVDLSGVSLGDSVHLSD 161
Query: 208 IEV 210
I +
Sbjct: 162 INL 164
>gi|108803738|ref|YP_643675.1| 50S ribosomal protein L25 [Rubrobacter xylanophilus DSM 9941]
gi|108764981|gb|ABG03863.1| LSU ribosomal protein L25P [Rubrobacter xylanophilus DSM 9941]
Length = 226
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
++A R+ G + R R+ G IPAV++ ++ L+ K + L
Sbjct: 6 ALEARIRQGRGKGEARRLRASGMIPAVLYGN----------GSAQSTALAVPAKVVDYTL 55
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + + + L++ G ++ ++D V RD TGR+L++ F D +
Sbjct: 56 QH----YGDNALYDLELDGGKKTARVVD--------VQRDPLTGRLLHVDFAPVDMTERI 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+V VP+ G G+K+GG L+ + ++ I +IEVDVS L + + + + D
Sbjct: 104 EVAVPLALAG--EPAGVKEGGVLQQVAYEVRVEALPGDIPQEIEVDVSGLGMQENLTLGD 161
Query: 208 IEVHPSWKLLSKNEKM-----PLCKISATKL 233
+ + +L+S E++ P +IS +L
Sbjct: 162 VRLPEGLRLVSDPEEVVATVTPPTEISEEEL 192
>gi|350273733|ref|YP_004885046.1| 50S ribosomal protein L25 [Rickettsia japonica YH]
gi|348592946|dbj|BAK96907.1| 50S ribosomal protein L25 [Rickettsia japonica YH]
Length = 203
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP V T + ++ FV+ ++ T+ K++VPVV++G E G+K+GGY ++ +
Sbjct: 74 KVLPKAVDLHPVTDIVRHVDFVFLEEKTQ-KMEVPVVYEGKERALGVKRGGYFNIVKRRV 132
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
LC +I + +DV+N+ + + S IE+ ++K E
Sbjct: 133 TLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTKKE 176
>gi|341584116|ref|YP_004764607.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
heilongjiangensis 054]
gi|340808341|gb|AEK74929.1| 50S ribosomal protein L25/general stress protein Ctc [Rickettsia
heilongjiangensis 054]
Length = 203
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP V T + ++ FV+ ++ T+ K++VPVV++G E G+K+GGY ++ +
Sbjct: 74 KVLPKAVDLHPVTDIVRHVDFVFLEEKTQ-KMEVPVVYEGKERALGVKRGGYFNIVKRRV 132
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
LC +I + +DV+N+ + + S IE+ ++K E
Sbjct: 133 TLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTKKE 176
>gi|348689661|gb|EGZ29475.1| hypothetical protein PHYSODRAFT_468557 [Phytophthora sojae]
Length = 254
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 80/184 (43%), Gaps = 21/184 (11%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVF--AQDLLDKNTDRRSPSRKQILSTERKQIHS 85
+Q RE GSR S R R QG +P V++ +D D+ P+R T +
Sbjct: 35 VLQLALRETEGSRASRRLRKQGFLPGVLYGEGEDGKDERVLVSFPTR-----TFERMHRK 89
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ S+E F V LD +P+ V+ F+ G
Sbjct: 90 LWTSIENQVFQVQVDDQPPVKAYMRDVQLDPVTDVPVAVN------------FLRFKPGR 137
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
KV +P+ + E PGLK+GG++ I SL+ + I +++DV+ L +GD+V++
Sbjct: 138 --KVSIPITYLNEEGSPGLKRGGFINHIHHSLECSIFTDDIPTTLQIDVNGLHVGDKVYL 195
Query: 206 SDIE 209
I+
Sbjct: 196 DAIK 199
>gi|398384279|ref|ZP_10542312.1| ribosomal protein L25, Ctc-form [Sphingobium sp. AP49]
gi|397722875|gb|EJK83404.1| ribosomal protein L25, Ctc-form [Sphingobium sp. AP49]
Length = 203
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G S R +GR+PAV++ N + S + E K ++ L
Sbjct: 6 TLSAEARDRAGKGASRALRREGRVPAVIYGM-----NEEPLS------IHVEEKLLNKQL 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ FF S + + G G +V + L V T R L+ F+ + +
Sbjct: 55 GTGH--FFNSV---IMVEVG-GKTV-----RTLAKDVAFHPVTDRPLHADFLRVSEHATV 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VPV F+ ++ PGLKKGG L +R ++ + A I + VD+ D+GD + +S
Sbjct: 104 TVAVPVRFENEDASPGLKKGGVLNIVRHDVELVVDAAEIPDDVVVDLKGFDVGDSIHISA 163
Query: 208 IEVHPSWKLLSKNEKMPLCKISA 230
+ + K ++ + I A
Sbjct: 164 VTLPKGAKAAIEDRDFTIATIVA 186
>gi|284046684|ref|YP_003397024.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Conexibacter
woesei DSM 14684]
gi|283950905|gb|ADB53649.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Conexibacter
woesei DSM 14684]
Length = 218
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 81/210 (38%), Gaps = 33/210 (15%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ PRE GSR + R R G +P +V+ D
Sbjct: 7 TLTVAPREIEGSRATRRLRRSGLVPGIVYGGD---------------------------- 38
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLD-SGKVLPIKV---HRDEETGRILNLVFVWADD 143
+ LPF A G+ + L G P+ + HR G +L++ + D
Sbjct: 39 -ADPLPFQVDARELRNALAHGGAVIQLTLDGAQTPVVLKDHHRHPVNGNMLHVDLLRVDL 97
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ V V + PG+K GG L+ + + I IE+DVS++++GD V
Sbjct: 98 TQRIHATVVVEVINADDAPGIKGGGVLEQVTREINIEALPNEIPDTIELDVSSVEVGDTV 157
Query: 204 FMSDIEVHPSWKLLSKNEKMPLCKISATKL 233
++S + LL E+ L + A KL
Sbjct: 158 YLSALTPPSGVALLDDLEETVLVSVLAPKL 187
>gi|395779604|ref|ZP_10460073.1| 50S ribosomal protein L25 [Bartonella washoensis 085-0475]
gi|395419979|gb|EJF86264.1| 50S ribosomal protein L25 [Bartonella washoensis 085-0475]
Length = 208
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ + ++ P + E I
Sbjct: 5 YTLKAEIRERVGKGSSRELRRNGLIPAVIYGE--------KQPPLAITVPYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDG 144
+ F +T +++++ K VLP D L++ F+
Sbjct: 51 FYKIHAGGFRTTI----------ATIVIGKQKITVLPKDYQLDPVRDFPLHVDFLRISAK 100
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
+ ++V++PV F ++ PGLKKGG L +R ++ PA I IE+D+S+ IGD +
Sbjct: 101 SVVEVNIPVHFLNEDTAPGLKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIH 160
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISA 230
+S +++ + + ++ + I+A
Sbjct: 161 ISAVQLPEGVEPVIQDRDFTIATIAA 186
>gi|158425771|ref|YP_001527063.1| 50S ribosomal protein L25 [Azorhizobium caulinodans ORS 571]
gi|172047829|sp|A8HS67.1|RL25_AZOC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|158332660|dbj|BAF90145.1| ribosomal protein L25 [Azorhizobium caulinodans ORS 571]
Length = 207
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 85/182 (46%), Gaps = 22/182 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A+ R G + +R GR+PAV++ + ++ P +S K+I I+
Sbjct: 7 LKAVARARGGKGAARAERRAGRVPAVIYGE--------KQEPVT---ISLGHKEITRIIY 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F +T F + + +V+P D L++ F+ G +
Sbjct: 56 A---GHFLTTLFEIDVDG--------VKHRVIPRDYQLDPVKDLPLHVDFLRVSQGASVT 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V+VPV F+ + PGLK GG L + ++ CPAE I + D++ L+IGD + +S +
Sbjct: 105 VEVPVHFENQDKAPGLKSGGTLNVVAHAVALECPAEAIPDHVVADLTGLEIGDSLHLSKV 164
Query: 209 EV 210
++
Sbjct: 165 KL 166
>gi|407769661|ref|ZP_11117035.1| 50S ribosomal protein L25/general stress protein Ctc [Thalassospira
xiamenensis M-5 = DSM 17429]
gi|407287178|gb|EKF12660.1| 50S ribosomal protein L25/general stress protein Ctc [Thalassospira
xiamenensis M-5 = DSM 17429]
Length = 206
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 59/113 (52%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+VLP V D+ T +++ F+ G + V+VPV F E PGLKKGG L +R +
Sbjct: 73 EVLPRDVQFDKVTDAPIHVDFLRFAKGQTMTVEVPVRFVNEEKSPGLKKGGVLNIVRHDV 132
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISA 230
+ C I ++ D++ +++GD + +S I++ +L + + ++A
Sbjct: 133 EVECAPNAIPEELVFDLTGVEVGDSIHISAIKLPKGVELTITDRDFTVATVAA 185
>gi|293607609|ref|ZP_06689943.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Achromobacter
piechaudii ATCC 43553]
gi|292814042|gb|EFF73189.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Achromobacter
piechaudii ATCC 43553]
Length = 216
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 78/181 (43%), Gaps = 22/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R GS S R R GR+PA+V+ N + + +I+ L+
Sbjct: 18 ATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIE-----------LDHNEIYHALRKE 66
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
E F ++ +Q+ VLL S V ++L++ F D L+
Sbjct: 67 E---FHASILQMQLEGSKDEQVLLRS-------VQWHAYKPQVLHVDFQRVDANQALRTK 116
Query: 151 VPVVFKGVESCPGLKKGGYLKS-IRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F E P +K G + S + T L+ C + + IEVD++N+ G + ++DI+
Sbjct: 117 VPLHFVNAEISPAVKLAGAMISHVTTELEITCLPKALPQFIEVDLANILAGASIHLADIK 176
Query: 210 V 210
+
Sbjct: 177 L 177
>gi|254482824|ref|ZP_05096061.1| ribosomal protein L25, Ctc-form [marine gamma proteobacterium
HTCC2148]
gi|214036905|gb|EEB77575.1| ribosomal protein L25, Ctc-form [marine gamma proteobacterium
HTCC2148]
Length = 220
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 24/182 (13%)
Query: 29 IQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+QA RE TG S R R G++PA+++ D + P Q L+ RK I
Sbjct: 7 VQAELREDTGKGASRRLRRLAGKVPAIIYGGD--------KDP---QSLTLVRKDIE--- 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
KS+E F S + + ++L D + R +++ F+ D+ +
Sbjct: 53 KSLENEAFYSQVLEVNVAGEVQKAILKD--------LQRHPAKNNVMHADFLRIDEKVAI 104
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
KV+VP+ F E C G+K +GG ++ T ++ C I IEVD+ + G + +S
Sbjct: 105 KVNVPIHFLNEEDCAGVKMEGGMIQHQATDIEVSCLPGDIPEYIEVDMLEVITGQIIHLS 164
Query: 207 DI 208
++
Sbjct: 165 EV 166
>gi|218781214|ref|YP_002432532.1| 50S ribosomal protein L25/general stress protein Ctc
[Desulfatibacillum alkenivorans AK-01]
gi|226736306|sp|B8FLB8.1|RL25_DESAA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|218762598|gb|ACL05064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfatibacillum alkenivorans AK-01]
Length = 218
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 79/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H ++A PR G+ + R +G IPAV++ D S LS K + I
Sbjct: 4 HELKASPRTTRGNGPARALRREGFIPAVLYGPD-----------SEPITLSVSHKDLSDI 52
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
L+ V F L I K + ++ + + R L+ F +
Sbjct: 53 LQGVG---SSQVMFNLNIEGADAPR------KAMIKELQTNVVSQRYLHADFYEISMDRK 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L V VPVV +G G+++GG L+ IR L+ +C I + +DV+ L IG+ V +S
Sbjct: 104 LHVMVPVVVEG--KSKGMEEGGLLQVIRRELEVICLPGDIPEEFVIDVTELGIGEAVHLS 161
Query: 207 DI 208
D+
Sbjct: 162 DV 163
>gi|424885426|ref|ZP_18309037.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393177188|gb|EJC77229.1| ribosomal protein L25, Ctc-form [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 202
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 79/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPIAIALNTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ KVLP D +++ F+ T+
Sbjct: 52 TKRIHAGGFMTTVATIEVDG--------KKYKVLPKDYQLDPVRDFTMHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V +PV F + GLK GG L +R ++ CPA+ I VD+S IGD + +S
Sbjct: 104 VTVAIPVHFINEDKSQGLKVGGVLNIVRHEVEVHCPADAIPEFFNVDLSGKKIGDSIHIS 163
Query: 207 DI 208
++
Sbjct: 164 EV 165
>gi|410447362|ref|ZP_11301458.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86E]
gi|409979637|gb|EKO36395.1| ribosomal protein L25, Ctc-form [SAR86 cluster bacterium SAR86E]
Length = 234
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 23/164 (14%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R +PA+++ + KN + +++ + K+ E F + + +
Sbjct: 25 REDAMVPAIIYGNEEESKNI--------------KLKLNELTKASENELFYTQVLKILLE 70
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
G V+L + P+K G+ L+ F T+LKV VP F G E C G+K
Sbjct: 71 -GQEEKVVLKELQREPVK-------GKFLHADFQRVSRKTKLKVVVPFKFNGEEECEGVK 122
Query: 166 -KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+GG + + ++ C A I IE+D+SNL + + + +SD+
Sbjct: 123 TEGGVIAKAISEIEIACLAGDIPEAIEIDISNLMLNEAIRLSDL 166
>gi|418940709|ref|ZP_13494063.1| 50S ribosomal protein L25 [Rhizobium sp. PDO1-076]
gi|375052533|gb|EHS48946.1| 50S ribosomal protein L25 [Rhizobium sp. PDO1-076]
Length = 199
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 23/184 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A+ RE G S R G IPAV++ D+++P I + E I
Sbjct: 6 YELKAVARERVGKGSSRELRRNGSIPAVIYG--------DKQAPISISINTNE------I 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T ++I +G + KVLP D +++ F+ ++
Sbjct: 52 TKRIHAGGFMTTIAVIEI---NGEKI-----KVLPKDYQLDPVRDFTMHIDFLRVSANSQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V VPV F E +K G L +R ++ CPA++I I VD+S IGD + +S
Sbjct: 104 VSVQVPVHFVN-EDKSAVKIGAVLNIVRHDVELHCPADNIPEFITVDLSGAKIGDSIHIS 162
Query: 207 DIEV 210
+++
Sbjct: 163 AVKL 166
>gi|402548558|ref|ZP_10845411.1| 50S ribosomal protein L25/general stress protein Ctc [SAR86 cluster
bacterium SAR86C]
gi|402548859|ref|ZP_10845712.1| 50S ribosomal protein L25/general stress protein Ctc [SAR86 cluster
bacterium SAR86C]
Length = 229
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 102/217 (47%), Gaps = 26/217 (11%)
Query: 29 IQAIPRECTGSRVSARDRS-QGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A RE TGS + R G IPA+++ + K L+ + K ++ +
Sbjct: 7 LNADSRERTGSNKARVIRKVDGMIPAIIYGDE-------------KDSLNIKLK-LNELT 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K+ + F + L I+ G KV+ ++ +D G+ L+ F+ T+L
Sbjct: 53 KASQNELFYTQV--LIIKNGDLEE------KVVLKELQKDPAKGKFLHADFLRVSRKTKL 104
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
KV +P+ F E C G+K +GG L ++ +C A +I I++DV+ LD+G V ++
Sbjct: 105 KVIIPINFLNEEECAGVKNEGGVLNKTIREVEVMCLAGNIPESIDIDVTALDLGQSVRLT 164
Query: 207 DIEVHPSWKL--LSKNEKMPLCKISATKLENPEPAVM 241
+I + ++ L++ + ++A K EP V+
Sbjct: 165 EINLPDGAEIPGLTEETDQMVISVNAPKAVEEEPEVI 201
>gi|393722732|ref|ZP_10342659.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. PAMC 26605]
Length = 225
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 31/182 (17%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G S R +GR+PAV++ +++ P + E K + +L +
Sbjct: 12 REQVGKGASRLLRREGRVPAVIYG--------NKQEPLSIHV---EEKALMRLLMTGHF- 59
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSG----KVLPIKVHRDEETGRILNLVFVWADDGTELKV 149
S V++D+G + LP V D T R ++ F+ + + V
Sbjct: 60 --------------MNSVVMIDAGGQQVRTLPKDVSFDAVTDRPTHVDFLRISAHSTVTV 105
Query: 150 DVPVVFKGVESCPGL-KKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VP+ F + PG+ K GG L R L+ +C A +I +I + ++ L++G + +SD+
Sbjct: 106 QVPIAFTDEDDAPGIAKAGGVLNVTRHELELVCDAANIPSEITISLAGLEVGASIHISDV 165
Query: 209 EV 210
++
Sbjct: 166 KL 167
>gi|218530649|ref|YP_002421465.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium extorquens CM4]
gi|240139021|ref|YP_002963496.1| 50S ribosomal protein L25 [Methylobacterium extorquens AM1]
gi|418058619|ref|ZP_12696589.1| 50S ribosomal protein L25 [Methylobacterium extorquens DSM 13060]
gi|254801054|sp|B7KNU8.1|RL25_METC4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|218522952|gb|ACK83537.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium extorquens CM4]
gi|240008993|gb|ACS40219.1| 50S ribosomal protein L25 (General stress protein CTC)
[Methylobacterium extorquens AM1]
gi|373567858|gb|EHP93817.1| 50S ribosomal protein L25 [Methylobacterium extorquens DSM 13060]
Length = 228
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 86/189 (45%), Gaps = 25/189 (13%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQI-LSTERKQ 82
S T++A+ R+ G + R QG+IPAV++ + ++P I L R
Sbjct: 2 SATKTLEAVARDRVGKGAARAVRRQGQIPAVIYGGN--------QAPQAIAIDLIRARTL 53
Query: 83 IHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD 142
I++ F +T F +I AG + + +P D +G L++ F+
Sbjct: 54 IYA-------GGFKTTVF--EIDAGGKKT------RAIPRDYQLDPVSGVPLHVDFLRVV 98
Query: 143 DGTELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
G + VDVPV F + PG+K KGG L ++ + I IEVD++ +IGD
Sbjct: 99 AGQTVTVDVPVHFVNEDQAPGIKQKGGTLNVALHTVSLEVAPDQIPDAIEVDLAGREIGD 158
Query: 202 RVFMSDIEV 210
+ SD+ +
Sbjct: 159 VIHASDLRL 167
>gi|154246548|ref|YP_001417506.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthobacter
autotrophicus Py2]
gi|226694603|sp|A7IIK6.1|RL25_XANP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|154160633|gb|ABS67849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xanthobacter
autotrophicus Py2]
Length = 203
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 79/182 (43%), Gaps = 22/182 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A+ R G + +R GR+PAV++ + KQ T I K
Sbjct: 7 LKAVARPRAGKGAARAERRAGRVPAVIYGE--------------KQEPVTISLNFREINK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F +T F + + +V+P D L++ F+ G +
Sbjct: 53 TIYAGHFLTTLFEIDVDG--------TKHRVIPRDYQLDVVKDFPLHVDFLRVSQGATVT 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V+VPV F E+ P LK GG L + +++ CPAE I +EVD++ GD +S I
Sbjct: 105 VEVPVHFLNQEASPALKAGGTLNVVAHAVELECPAESIPASVEVDLTGAAYGDTFHLSGI 164
Query: 209 EV 210
++
Sbjct: 165 KL 166
>gi|138893724|ref|YP_001124177.1| 50S ribosomal protein L25 [Geobacillus thermodenitrificans NG80-2]
gi|166223684|sp|A4IJC8.1|RL25_GEOTN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|134265237|gb|ABO65432.1| General stress protein [Geobacillus thermodenitrificans NG80-2]
Length = 210
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 79/173 (45%), Gaps = 25/173 (14%)
Query: 44 RDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQ 103
R RSQG IPAV++ + + +K + ++ L + HS++ T +
Sbjct: 20 RIRSQGGIPAVLYGKKVDNKMISISAADLEKALREGGR--HSLV-----------TLKVD 66
Query: 104 IRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPG 163
G SVLL +V RD G +L+ F D E+ VDV V G PG
Sbjct: 67 ---GEDYSVLLR-------EVQRDPLRGELLHADFQAVDMSAEVDVDVEVRLVG--EAPG 114
Query: 164 LKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
+K GG L+ L +I P IEVD+S L +GD + + D++ ++++
Sbjct: 115 VKDGGVLQQNLHELSIRVLPANIPPAIEVDISGLQVGDVITVGDVQTGGTFEI 167
>gi|421486681|ref|ZP_15934217.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
piechaudii HLE]
gi|400194986|gb|EJO27986.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
piechaudii HLE]
Length = 202
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 22/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R GS S R R GR+PA+V+ N + + +I+ L+
Sbjct: 5 ATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIE-----------LDHNEIYHALRKE 53
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
E F ++ +Q+ VLL S V ++L++ F D L+
Sbjct: 54 E---FHASILQMQLEGAKEEQVLLRS-------VQWHAYKPQVLHVDFQRVDANQALRTK 103
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F E P +K G + + T L+ C + + IEVD++N+ G + ++DI+
Sbjct: 104 VPLHFVNAEISPAVKLSGAIISHVTTELEITCLPKALPQFIEVDLTNILAGASIHLADIK 163
Query: 210 V 210
+
Sbjct: 164 L 164
>gi|34581435|ref|ZP_00142915.1| 50S ribosomal protein L25 [Rickettsia sibirica 246]
gi|28262820|gb|EAA26324.1| 50S ribosomal protein L25 [Rickettsia sibirica 246]
Length = 203
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP V T + ++ FV+ + T+ K++VPVV++G E G+K+GGY ++ +
Sbjct: 74 KVLPKAVELHPVTDIVRHVDFVFLEAKTQ-KMEVPVVYEGKERALGVKRGGYFNIVKRRV 132
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
LC +I + +DV+N+ + + S IE+ ++K E
Sbjct: 133 TLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTKKE 176
>gi|295687989|ref|YP_003591682.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
segnis ATCC 21756]
gi|295429892|gb|ADG09064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Caulobacter
segnis ATCC 21756]
Length = 199
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 85/177 (48%), Gaps = 22/177 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R+ +G+ + R +G+IP V++ N R+ ++ L T + H +
Sbjct: 11 RDGSGTGAARAVRREGKIPGVLYGGGKAPVNIAVRANEFRKSLYTGKLLGHLVT------ 64
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
LQ SV+ + + P+ T ++ D+ +K++VPV
Sbjct: 65 --------LQ-HGDEKQSVIAKAVQFHPV-------TDEPVHFDLYRVDEHQLIKIEVPV 108
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
FK + GLKKGG L+ IR +++ CPA+ I ++ +D+++ DIGD + +S++++
Sbjct: 109 HFKNHDISVGLKKGGSLEVIRHTVELACPADKIPEELVIDLASHDIGDTIRISEVKL 165
>gi|119386784|ref|YP_917839.1| 50S ribosomal protein L25 [Paracoccus denitrificans PD1222]
gi|166223701|sp|A1B9E9.1|RL25_PARDP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|119377379|gb|ABL72143.1| LSU ribosomal protein L25P [Paracoccus denitrificans PD1222]
Length = 208
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 21/175 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG + + R +G++P +V+ D + P QI + +S+L +
Sbjct: 13 RAGTGKGAARQARREGKVPGIVYG--------DGKEPQPIQI------EFNSLLTKLRAG 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ST + L++ D +V+ V RD ++ F+ T + + + V
Sbjct: 59 RFMSTLWNLKVEG-------QDDVRVVCRGVQRDVVKDLPTHIDFMRLHRNTRVNLFIHV 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
F+ + PGLK+GG L +R ++ + A I +I VD++ IGD + ++D+
Sbjct: 112 NFENQDEAPGLKRGGTLVVVRPEVELVVTASDIPEQITVDLTGKQIGDTIHINDV 166
>gi|384215561|ref|YP_005606727.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 6]
gi|354954460|dbj|BAL07139.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 6]
Length = 237
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 56/104 (53%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ +G +++ VP+ ES PG+K+GG + + ++
Sbjct: 74 RVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKAESSPGVKRGGTVNIVAHAI 133
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ C E I IE DV L+IG + +SD+++ K L++ +
Sbjct: 134 ELECGVESIPQYIEADVGTLEIGHSLHLSDVKLPAGVKALTRED 177
>gi|402496564|ref|YP_006555824.1| 50S ribosomal protein L25 [Wolbachia endosymbiont of Onchocerca
ochengi]
gi|398649837|emb|CCF78007.1| 50S ribosomal protein L25 [Wolbachia endosymbiont of Onchocerca
ochengi]
Length = 203
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 22/195 (11%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A R+ T ++ R +G IPAV++ K D + + LST+
Sbjct: 8 TINAELRDVTKTKAMYSLREKGYIPAVIYG-----KGHDNVNLT----LSTKE-----FT 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K +L + L I +G L+ S I+ H ++T I ++ F + D E+
Sbjct: 54 KKYKLGSLSAHVIELNI-SGKKEYALVRS-----IQWHMVKDT--IQHVDFQFVDKDGEV 105
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
K+D+P++F PG+K GG L + S+ + I IEVD+S+ IG + +SD
Sbjct: 106 KIDIPLLFVNESKSPGIKLGGVLNILCRSITVKSSLDRIPQAIEVDLSDKMIGQSIHISD 165
Query: 208 IEVHPSWKLLSKNEK 222
+++ KL + E+
Sbjct: 166 VKLPEGVKLAAHEEE 180
>gi|434393872|ref|YP_007128819.1| LSU ribosomal protein L25P [Gloeocapsa sp. PCC 7428]
gi|428265713|gb|AFZ31659.1| LSU ribosomal protein L25P [Gloeocapsa sp. PCC 7428]
Length = 223
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 18/183 (9%)
Query: 41 VSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTF 100
V + R++G P + L+ N + + L+ E K + ++LK + +T
Sbjct: 5 VEGKKRAEGSKPNALRRSGLIPANLYGHNGTESIHLTLEAKTVETLLKQASV---NNTLI 61
Query: 101 PLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRI---LNLVFVWADDGTELKVDVPVVFKG 157
L I S L GK L +V R T R L+ V A D E V+VP+ F G
Sbjct: 62 QLNI------SDLPWRGKALLREVQR-HPTKRFPYHLSFFSVAAQDTVE--VEVPLHFVG 112
Query: 158 VESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
PG+K +GG L ++ T ++ C + I IE+DVSN++IGD V++ ++ + L
Sbjct: 113 --EAPGVKIEGGALDTVLTHIQVRCAPDRIPETIEIDVSNMNIGDVVYLQELVLPEGVSL 170
Query: 217 LSK 219
+S+
Sbjct: 171 VSE 173
>gi|393775374|ref|ZP_10363688.1| 50S ribosomal protein l25/general stress protein ctc [Ralstonia sp.
PBA]
gi|392717951|gb|EIZ05511.1| 50S ribosomal protein l25/general stress protein ctc [Ralstonia sp.
PBA]
Length = 206
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ P +++ S K I H++ K
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPGIIYGG----------SAEPKLIELDHNALFHALKK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ +++ AG VLL ++ P K +L++ F D ++
Sbjct: 53 EA----FHSSILDMEV-AGKAEKVLLRDFQMHPFKP-------MVLHIDFQRVDANAKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I L+ C + IEVD+ L++G + +SD
Sbjct: 101 VKVPLHFLNTETAPGVKVGHGIVNHIANELEVSCLPADLPEFIEVDLGALELGQSLHLSD 160
Query: 208 IEV 210
+++
Sbjct: 161 LKL 163
>gi|30249779|ref|NP_841849.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosomonas
europaea ATCC 19718]
gi|71153155|sp|Q82TQ5.1|RL25_NITEU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|30180816|emb|CAD85736.1| Ribosomal protein L25 [Nitrosomonas europaea ATCC 19718]
Length = 198
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A R+ G+ + R RSQGR+P V++ N D +S + + K ++ LK
Sbjct: 5 ISANSRKLHGTGANRRLRSQGRLPGVIYG-----GNGDAQS------IELDHKDLYYKLK 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F ++ + I G VLL ++ P K ++L++ F ++
Sbjct: 54 ---MEAFHASILSISID-GKKEQVLLRDVQMHPFKQ-------QVLHIDFQRVRQDQKIH 102
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F + PG+K GG + + T ++ C + + I VD+S + G + +SD
Sbjct: 103 VKVPLHFINADIAPGVKLSGGMISHVATEIEISCLPKDLPEFITVDLSGMTAGSTLHLSD 162
Query: 208 IEVHPSWKL--LSKNEKMPLCKISATKLENPE 237
+ + + ++ L K + +P+ + A + E E
Sbjct: 163 LILSENVEIPALLKGDNLPVATLIAKRGEAGE 194
>gi|403238525|ref|ZP_10917111.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp.
10403023]
Length = 199
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 73/163 (44%), Gaps = 25/163 (15%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
RS+G+IPA+V+ ++ S+ + L + S++K V S T
Sbjct: 21 RSEGKIPAIVYGRN-----------SKTESLLINNSDLRSVIKDVGRNGIFSVTVN---- 65
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
G +V+L + PIK IL++ F+ D TE+ V V+ KG + G K
Sbjct: 66 -GKSKNVILRDYQNDPIK-------KEILHVDFLQVDKDTEIDTKVNVILKG--TSIGEK 115
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
GG K L A+ I IE+D++ +IG V ++DI
Sbjct: 116 AGGVAKQFVYELDLTAKAKDIPDYIEIDITEFEIGHSVRIADI 158
>gi|433445432|ref|ZP_20409839.1| 50S ribosomal protein L25 [Anoxybacillus flavithermus TNO-09.006]
gi|432001080|gb|ELK21965.1| 50S ribosomal protein L25 [Anoxybacillus flavithermus TNO-09.006]
Length = 211
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 79/177 (44%), Gaps = 37/177 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R QG IPAV++ + + ++ F + F Q+R
Sbjct: 22 RKQGHIPAVLYGKTMNSQSV----------------------------FVDAAEFLKQLR 53
Query: 106 AGSGSSVLLDSG------KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVE 159
A +G + LLD+ +++ + + I+++ F+ D TE+ V VP+ G
Sbjct: 54 A-TGGTGLLDAKMNDNHIRIIARDMQKHPIRHDIIHIDFLAVDAKTEIDVHVPIHLVG-- 110
Query: 160 SCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
G+K GG L+ L +I P I+VD++NL +GD + +S I+ + ++++
Sbjct: 111 EAAGVKDGGVLQQAMHQLSIRALPSNIPPSIDVDITNLQVGDVITVSHIQTNGAYEI 167
>gi|423712324|ref|ZP_17686626.1| 50S ribosomal protein L25 [Bartonella washoensis Sb944nv]
gi|395412198|gb|EJF78707.1| 50S ribosomal protein L25 [Bartonella washoensis Sb944nv]
Length = 208
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 92/206 (44%), Gaps = 26/206 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ + ++ P + E I
Sbjct: 5 YTLKAEIRERVGKGSSRELRRNGLIPAVIYGE--------KQPPLAITVPYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDG 144
+ F +T +++++ K VLP D L++ F+
Sbjct: 51 FYKIHAGGFRTTI----------ATIVIGKQKITVLPKDYQLDPVRDFPLHVDFLRISAK 100
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
+ ++V++PV F ++ PGLKKGG L +R ++ PA I IE+D+S+ IGD +
Sbjct: 101 SVVEVNIPVHFLNEDTAPGLKKGGVLNIVRHEIECTAPANAIPEAIEIDLSSYSIGDSIH 160
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISA 230
+S +++ + ++ + I+A
Sbjct: 161 ISAVQLPEGVDPVIQDRDFTIATIAA 186
>gi|344337615|ref|ZP_08768549.1| 50S ribosomal protein L25 [Thiocapsa marina 5811]
gi|343802568|gb|EGV20508.1| 50S ribosomal protein L25 [Thiocapsa marina 5811]
Length = 204
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 78/180 (43%), Gaps = 22/180 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A PR G+ S R R G++PA+V+ + P + E +LK
Sbjct: 7 INAQPRALAGTGASRRLRRTGQVPAIVYG--------GHQEPEMVSVGHNE------LLK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+E F S L+I S VL D + R + ++ F+ +L+
Sbjct: 53 HLEHEAFYSHVLDLKIGERSVKVVLKD--------LQRHPAKPFVQHVDFLRITQDEKLR 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ VP+ F E G+K GG + T L+ +C + + I VD+ +L+IG + +SDI
Sbjct: 105 MSVPLHFINEERSKGVKMGGQVSHNITELEIVCLPKDLPEFIAVDMGDLEIGQIIHLSDI 164
>gi|225181558|ref|ZP_03735000.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiobacter
alkaliphilus AHT 1]
gi|225167806|gb|EEG76615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Dethiobacter
alkaliphilus AHT 1]
Length = 214
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 49/207 (23%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+QA+PRE R+ G +P +V+ Q ++ + K I SIL+
Sbjct: 6 VQAVPREKVTKSQLKELRNSGMVPGIVYGQ-----------KDDAVAIAVDSKDIISILQ 54
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLV----------- 137
S +G++ L+D + V ++ET I LV
Sbjct: 55 S-----------------AAGTNSLVD------LAVEGNKETVIIKELVEDIFIQDRFTH 91
Query: 138 --FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVS 195
F+ +L+V VPV+F G G+K+GG L+ + + C I IE+D+S
Sbjct: 92 VDFLRISLKDKLEVQVPVIFTG--DAVGVKEGGTLQPLLREVSLKCLPTEIPESIELDIS 149
Query: 196 NLDIGDRVFMSDIEVHPSWKLLSKNEK 222
NL +G+ + + D+ V S +LL++ ++
Sbjct: 150 NLSVGETLTVGDLTVPASAELLNEADE 176
>gi|407786492|ref|ZP_11133637.1| 50S ribosomal protein L25/general stress protein Ctc [Celeribacter
baekdonensis B30]
gi|407201213|gb|EKE71214.1| 50S ribosomal protein L25/general stress protein Ctc [Celeribacter
baekdonensis B30]
Length = 206
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 21/185 (11%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R TG + + R G +P +V+ D + P + + +LK +
Sbjct: 10 ATVRAGTGKGAARQARRDGFVPGIVYGDD--------KEPMPINL------PFNVLLKRL 55
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
+ F ST F L++ D +V+ V RD ++ F+ + + +
Sbjct: 56 KAGRFLSTLFNLKVEG-------QDDVRVICRGVQRDVVKDLPTHVDFMRLHRNSRINLF 108
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+PV G E PG+KKGG + +RT ++ + A I I +D+S IGD +SDIE+
Sbjct: 109 IPVEIVGEEVSPGIKKGGVVTHVRTEVELIVTAADIPDHITLDISKGTIGDVYHISDIEL 168
Query: 211 HPSWK 215
K
Sbjct: 169 PKGTK 173
>gi|338708195|ref|YP_004662396.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
gi|336294999|gb|AEI38106.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. pomaceae ATCC 29192]
Length = 211
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 89/193 (46%), Gaps = 27/193 (13%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R+ G S R +G +PAV++ ++P+ ++ ++I ++ K +
Sbjct: 12 RDRAGKGASRAIRREGLVPAVIYGD---------KTPA----VAITVEEI-ALFKMLNTG 57
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKV--LPIKVHRDEETGRILNLVFVWADDGTELKVDV 151
F ++ L + D K+ LP V T R L++ F+ + ++V +
Sbjct: 58 HFMNSVVTLTV----------DGKKIPTLPKDVQFHPVTDRALHVDFLRVSATSMIEVAI 107
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
PV + E PG+K+GG L I LK A I +IEV V L++GD + ++ +++
Sbjct: 108 PVSYVDEEKSPGIKRGGVLNIIHHELKLKVKATDIPEQIEVSVEGLEVGDSIHINQLKL- 166
Query: 212 PSWKLLSKNEKMP 224
P+ L+ +E P
Sbjct: 167 PAGVELAHDEHEP 179
>gi|146328681|ref|YP_001208996.1| 50S ribosomal protein L25 [Dichelobacter nodosus VCS1703A]
gi|172047325|sp|A5EWV0.1|RL25_DICNV RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|146232151|gb|ABQ13129.1| 50S ribosomal protein L25 [Dichelobacter nodosus VCS1703A]
Length = 225
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 95/217 (43%), Gaps = 28/217 (12%)
Query: 25 YYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH 84
Y +T+ A+ RE G S R R QG +PA+++ NT+ ++ + KQ + + H
Sbjct: 6 YRYTLHAVVREEQGKGASRRLRRQGLVPAIIYG-----GNTEPQAIAIKQDELKKNAKNH 60
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK---VLPIKVHRDEETGRILNLVFVWA 141
S F S L+I +L+ + P+ H D + RI+
Sbjct: 61 S---------FFSQIINLKIDGQEDQEILVRDVQHHIYKPLFQHFDFQ--RIVR------ 103
Query: 142 DDGTELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
G E+ V + F G E PG+K GG + T+++ +C + I VD+S +IG
Sbjct: 104 --GQEITATVLLEFVGEERAPGIKTDGGIVSRHMTTVEVICRPSLLPEYIAVDLSEANIG 161
Query: 201 DRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPE 237
D + ++D+++ +L+ E ++ P+
Sbjct: 162 DIITLADLKLPEGVRLVGDMEDEEFAATVVVQISYPQ 198
>gi|288554661|ref|YP_003426596.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
pseudofirmus OF4]
gi|288545821|gb|ADC49704.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
pseudofirmus OF4]
Length = 211
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 43/204 (21%)
Query: 28 TIQAIPR-ECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+QA PR + TGS + + R G +PA+++ + E K ++
Sbjct: 4 TLQANPRTDLTGS-ATRQIRKDGHVPAILYGNKI------------------ESKPVY-- 42
Query: 87 LKSVELPFFCSTT--------FPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVF 138
++SVE F T F L + GS V++ ++ P+K +++ F
Sbjct: 43 VESVE---FLKTVREVGKNGLFSLNVD-GSKHQVMIHDVQIDPLK-------NEYVHVDF 91
Query: 139 VWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLD 198
D +E+ DVPV G PG K+GG L + + C I +I+VDVS L+
Sbjct: 92 FEVDMKSEIDADVPVRLTG--EAPGTKEGGVLSHLLYDISVKCLPNDIPEEIKVDVSGLN 149
Query: 199 IGDRVFMSDIEVHPSWKLLSKNEK 222
IGD + ++D+ S + +++E+
Sbjct: 150 IGDSIQITDLRDKVSVDITNEDEE 173
>gi|254462647|ref|ZP_05076063.1| ribosomal protein L25, Ctc-form [Rhodobacterales bacterium
HTCC2083]
gi|206679236|gb|EDZ43723.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium
HTCC2083]
Length = 218
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 82/182 (45%), Gaps = 21/182 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG + + R G +P ++F D P + + +LK+++
Sbjct: 13 RTGTGKGAARQARRAGMVPGIIFGGDA--------DPLPINV------PFNVLLKALKAG 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ST +++ D +V+ V R ++ F+ T++ + +PV
Sbjct: 59 RFKSTLLNMKVEG-------HDDVRVICRDVQRHVVKDLPTHIDFMRLKRTTKINLFIPV 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
F E+ PG+K+GG L ++R ++ + A I K+ VD++ LD+GD + +SDI +
Sbjct: 112 EFINEEAAPGIKRGGVLTTVRPEVELIVTAGDIPEKLTVDMTGLDVGDTINISDITLPAG 171
Query: 214 WK 215
K
Sbjct: 172 AK 173
>gi|359799752|ref|ZP_09302305.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
arsenitoxydans SY8]
gi|359362178|gb|EHK63922.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
arsenitoxydans SY8]
Length = 202
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 85/204 (41%), Gaps = 23/204 (11%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R GS S R R GR+PA+V+ N + + +I+ L+
Sbjct: 5 ATARSVQGSSASRRLRRAGRVPAIVYGGSAAPLNIE-----------LDHNEIYHALRKE 53
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
E F ++ +Q+ VLL S V ++L++ F D L+
Sbjct: 54 E---FHASILQMQLDGAKDEQVLLRS-------VQWHAYKPQVLHVDFQRVDANQALRTK 103
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F E P +K G + + T L+ C + P IE++++++ G V ++DI+
Sbjct: 104 VPLHFVNAEVSPAVKLSGAIISHVTTELEITCLPSALPPFIEINLADVLAGGSVHLADIK 163
Query: 210 VHPSWKLL-SKNEKMPLCKISATK 232
+ + E+ PL + TK
Sbjct: 164 LPIGVTYVPHGGEENPLLAAAVTK 187
>gi|302844117|ref|XP_002953599.1| hypothetical protein VOLCADRAFT_106036 [Volvox carteri f.
nagariensis]
gi|300261008|gb|EFJ45223.1| hypothetical protein VOLCADRAFT_106036 [Volvox carteri f.
nagariensis]
Length = 299
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%)
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VDVPV E PG++KGG++ ++ +++Y I P IEV+V +LD+ + + D+
Sbjct: 213 VDVPVRLVNDEMAPGVRKGGWMCMLKRTVRYKALGNAIPPYIEVNVRHLDLEQDLLVRDL 272
Query: 209 EVHPSWKLLSKNEKMPLCKIS 229
+ P K+ KN P+ + +
Sbjct: 273 PIPPGTKIYEKNFNAPVVRCT 293
>gi|114769270|ref|ZP_01446896.1| Ribosomal protein L25 [Rhodobacterales bacterium HTCC2255]
gi|114550187|gb|EAU53068.1| Ribosomal protein L25 [Rhodobacterales bacterium HTCC2255]
Length = 221
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 90/202 (44%), Gaps = 21/202 (10%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ PR TG + + R G +P VV+ P I + + K
Sbjct: 8 LELTPRAGTGKGAARQARRDGLVPGVVYGGG--------EEPQAITI------PFNILFK 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F ST F L++ GS + + + V +D T ++ F+ + +
Sbjct: 54 KLKDGGFMSTLFNLKV---EGSDDVRAVCRGVQRHVVKDLPT----HIDFLRLKRDSRIN 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+++PV F E+ GLKKGG L +R ++ + A +I IE D+ NL+IG+ + +SDI
Sbjct: 107 MNIPVHFLNEETSAGLKKGGTLTIVRAEVELMVTAGNIPDYIEADLENLEIGETINISDI 166
Query: 209 EVHPSWKLLSKNEKMPLCKISA 230
+ + + + + I+A
Sbjct: 167 TLPEDTRPVIADRDFVIANIAA 188
>gi|15892855|ref|NP_360569.1| 50S ribosomal protein L25 [Rickettsia conorii str. Malish 7]
gi|71153165|sp|Q92H40.1|RL25_RICCN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|15620041|gb|AAL03470.1| 50S ribosomal protein L25 [Rickettsia conorii str. Malish 7]
Length = 203
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 57/104 (54%), Gaps = 1/104 (0%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP V T + ++ FV+ ++ T+ K++VPVV++G E G+K+GGY ++ +
Sbjct: 74 KVLPKAVELHPVTDIVRHVDFVFLEEKTQ-KMEVPVVYEGKERALGVKRGGYFNIVKRRV 132
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
LC +I + +DV+N+ + + S IE+ ++ E
Sbjct: 133 TLLCDVNNIPRNVTIDVTNMPMATSLKSSKIELPKGCSFVTNKE 176
>gi|451811239|ref|YP_007447694.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
gi|451776397|gb|AGF47396.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium crithidii TCC036E]
Length = 202
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 81/182 (44%), Gaps = 27/182 (14%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R +GRIPA+V+ ++ SP ++ + I+ L+
Sbjct: 5 ATLRSVHGTSASRHLRHKGRIPAIVYGKN--------SSPLNIEL---DHNYIYHALRKE 53
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPI---KVHRDEETGRILNLVFVWADDGTEL 147
E F S+ + I LDS KV + V ++L++ F +
Sbjct: 54 E---FHSSVLSMNI---------LDSKKVEQVILRSVQWHPYKQQVLHVDFQRVSANQNI 101
Query: 148 KVDVPVVFKGVESCPGLKKGG-YLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
VP+ F E+ P +K GG + + T L+ C + P IE+D+SN+++G+ + S
Sbjct: 102 NTKVPLHFLNAETSPAVKLGGAIINHVITELEISCLPAVLPPFIEIDLSNIELGNSIHFS 161
Query: 207 DI 208
DI
Sbjct: 162 DI 163
>gi|383312893|ref|YP_005365694.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Rickettsia amblyommii str. GAT-30V]
gi|378931553|gb|AFC70062.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Rickettsia amblyommii str. GAT-30V]
Length = 203
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 56/104 (53%), Gaps = 1/104 (0%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP V T + ++ FV+ + + K++VPVV++G E G+K+GGY ++ +
Sbjct: 74 KVLPKAVELHPVTDIVRHVDFVFLGEKNQ-KMEVPVVYEGKERALGVKRGGYFNIVKRRV 132
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
LC +I + +DV+N+ I + S IE+ ++K E
Sbjct: 133 TLLCDVNNIPRNVTIDVTNMPIATSLKSSKIELPKGCSFVTKKE 176
>gi|345870956|ref|ZP_08822905.1| 50S ribosomal protein L25 [Thiorhodococcus drewsii AZ1]
gi|343921110|gb|EGV31834.1| 50S ribosomal protein L25 [Thiorhodococcus drewsii AZ1]
Length = 206
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 23/188 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A PRE G S R R G++P +++ + ++LS ++ LK +
Sbjct: 9 AQPRETAGKGASRRLRRTGQVPVILYG-----------AHQEPEMLSVAHNEL---LKHL 54
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
+ F S L++ + VL D + R IL++ F+ +LK+
Sbjct: 55 DNEAFYSHVLDLKVGDKATKVVLKD--------MQRHPSKPFILHVDFMRVSQDEKLKMV 106
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
VP+ F E+C G K GG + T ++ +C + + I +D++ L+IG V +S++ V
Sbjct: 107 VPLHFLNEETCAGAKAGGLVSHNITEVEIVCLPKDLPEYITLDLAELEIGAVVHLSEL-V 165
Query: 211 HPSWKLLS 218
P LS
Sbjct: 166 MPEGVALS 173
>gi|403069019|ref|ZP_10910351.1| 50S ribosomal protein L25 [Oceanobacillus sp. Ndiop]
Length = 213
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 93/212 (43%), Gaps = 24/212 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A RE + R GR+PAVV+ ++ KN S Q++ T R + + +
Sbjct: 5 LKAAKRENLTKSATKEIRLSGRVPAVVYGKEKEAKNV---SVDSIQLVKTVRDEGRNAII 61
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
S L + V+L ++ PIK ++++ F + E+
Sbjct: 62 S------------LDVENDGSIDVMLHEYQIEPIK-------DQLIHADFYVVNMSEEMD 102
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V+VP+ +G G K GG L+ L+ + I +I VD+S L+IGD + ++DI
Sbjct: 103 VEVPLRLEG--EAQGSKAGGVLQQPYFELQVRAKPDQIPEEISVDISALEIGDSLTIADI 160
Query: 209 EVHPSWKLLSKNEKMPLCKISATKLENPEPAV 240
++++L E + TK E+ E V
Sbjct: 161 PSKGNYEILDDAETTVATVLPPTKEEDLEADV 192
>gi|365154888|ref|ZP_09351286.1| ribosomal protein L25, Ctc-form [Bacillus smithii 7_3_47FAA]
gi|363628999|gb|EHL79692.1| ribosomal protein L25, Ctc-form [Bacillus smithii 7_3_47FAA]
Length = 214
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 25/177 (14%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R +G IPAV++ + L Q + R + +K V + L I
Sbjct: 22 RREGNIPAVIYGKGL-----------ENQAVYVSRTDLLKTIKEV----GRNGIITLNID 66
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
S+VL D D TG +++ F D TE+ +V V KG PG+K
Sbjct: 67 DREQSAVLHD--------YQEDTLTGEMIHADFFAVDPSTEISAEVVVELKG--EAPGVK 116
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEK 222
GG L+ L I I+VDVS L +GD + + DI+ H +++ +E+
Sbjct: 117 DGGVLQQPLFELTVKGKVTDIPDAIQVDVSQLQVGDTITVGDIKEHYPFEIQHGDEE 173
>gi|319408909|emb|CBI82566.1| 50S ribosomal protein L25 [Bartonella schoenbuchensis R1]
Length = 204
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ D++ P + E I
Sbjct: 5 YTLKAEIRERVGKGSSRELRRNGLIPAVIYG--------DKQPPLAIAVSYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T +++ +VLP D L++ F+ + +
Sbjct: 51 FYKIHAGGFRTTVATIEVDK--------KRIQVLPKDYQLDPVRDFPLHVDFLRVSEKSV 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F ++ PG+K+GG L +R ++ PA I I +D+S+ IGD + +S
Sbjct: 103 VHVNIPVHFLNEDTAPGIKRGGVLNIVRHEIECTAPANAIPEAINIDLSSYSIGDSIHIS 162
Query: 207 DIEVHPSWKLLSKNEKMPLCKISA 230
+++ + ++ + I+A
Sbjct: 163 AVQLPKGVTPVIQDRDFTIATIAA 186
>gi|299134267|ref|ZP_07027460.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Afipia sp.
1NLS2]
gi|298591014|gb|EFI51216.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Afipia sp.
1NLS2]
Length = 242
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%)
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
L++ F+ G ++V VP+ KG E PG+K+GG + + +++ E I IEVD
Sbjct: 90 LHVDFLRLGKGATIRVSVPLHVKGAEVSPGVKRGGTVNMVNHTVELEADVEQIPQFIEVD 149
Query: 194 VSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
VS L+I + + +SD+++ K +S+++
Sbjct: 150 VSKLEINNSLHLSDVQLPKGVKPVSRDD 177
>gi|414175243|ref|ZP_11429647.1| 50S ribosomal protein L25 [Afipia broomeae ATCC 49717]
gi|410889072|gb|EKS36875.1| 50S ribosomal protein L25 [Afipia broomeae ATCC 49717]
Length = 241
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 53/88 (60%)
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
L++ F+ +G++++V VP+ E+ PG+K+GG + + ++ PA++I +E D
Sbjct: 90 LHVDFLRLGEGSKIRVSVPLHVLNSETSPGVKRGGTVNIVTHNIDLEVPADNIPQYLEAD 149
Query: 194 VSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
V LDIG + ++DI++ KL ++ +
Sbjct: 150 VGKLDIGSSLHITDIKLPNGVKLFTRED 177
>gi|58696921|ref|ZP_00372422.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila simulans]
gi|58536851|gb|EAL60059.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Wolbachia
endosymbiont of Drosophila simulans]
Length = 203
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 99/220 (45%), Gaps = 39/220 (17%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A R+ T ++ R +G IP +++ + + N L+ K+
Sbjct: 8 TINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVN-----------LTLSAKE----- 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLD---SGK-----VLPIKVHRDEETGRILNLVFV 139
F Q ++GS S+ L++ SGK V I++H ++ + + F
Sbjct: 52 ------------FTKQYKSGSLSAHLIELNISGKKEYALVRDIQLHVVKDP--VQHGDFQ 97
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
+ G+E+K+D+P+ F PG+K GG L + S+ C + I IEVD+S I
Sbjct: 98 FDVKGSEIKIDIPLSFVNESKAPGIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMI 157
Query: 200 GDRVFMSDIEVHPSWKLLS-KNEKMPLCKISATKLENPEP 238
G + ++D+++ K ++ + E + ISA + EP
Sbjct: 158 GQSIHINDVKLPEGVKFVAHEEENFTIVTISAADSDVEEP 197
>gi|406989085|gb|EKE08901.1| hypothetical protein ACD_16C00237G0002 [uncultured bacterium]
Length = 222
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 45/77 (58%)
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
L++ F G ++ V VP+ F + PGLK+GG L I +L+ + +HI IE+D
Sbjct: 90 LHVDFFRVTKGEKIAVSVPIHFINEAASPGLKRGGVLNVIVHNLEVIADVDHIPTHIEID 149
Query: 194 VSNLDIGDRVFMSDIEV 210
++ L+I D V + D+++
Sbjct: 150 LTGLEIHDTVHLKDLKL 166
>gi|254284038|ref|ZP_04959006.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR51-B]
gi|219680241|gb|EED36590.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR51-B]
Length = 200
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 77/159 (48%), Gaps = 23/159 (14%)
Query: 51 IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGS 110
+PAVV+ D + P+ ++ RK +L E F + + + G+
Sbjct: 1 MPAVVYGTD--------KEPTSITLI---RKDFEKML---EAETFYTAIIDIDVE-GTHE 45
Query: 111 SVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK-KGGY 169
SV+L + P K G ++ F+ + TELKV +P+ F ++C G+K GG
Sbjct: 46 SVILKDLQRHPAK-------GFPMHADFLRINADTELKVAIPIHFMNEDTCVGVKVNGGV 98
Query: 170 LKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++ T ++ C +I IEVD++ LDIGD + ++D+
Sbjct: 99 IQRQETDIEVSCLPRNIPEYIEVDMAALDIGDSIHLTDV 137
>gi|408377521|ref|ZP_11175122.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
albertimagni AOL15]
gi|407748512|gb|EKF60027.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
albertimagni AOL15]
Length = 201
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 82/186 (44%), Gaps = 27/186 (14%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A+ RE G S R G IPAV++ D+++P I + E I
Sbjct: 6 YELKAVARERVGKGSSRELRRNGLIPAVIYG--------DKQAPIAISINTNE------I 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDG 144
K + F +T +++ LD K VLP D +++ F+
Sbjct: 52 TKRIHAGGFMTTV----------ATIELDGKKISVLPKDYQLDRVRDFTMHVDFLRVSAN 101
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
+++ V VPV F E +K G L +R ++ CPA I I VD++ L +GD +
Sbjct: 102 SQVSVQVPVHFVN-EEKSAIKTGAVLNIVRHEVELHCPASDIPEAITVDLAGLKVGDAIH 160
Query: 205 MSDIEV 210
+S +++
Sbjct: 161 ISAVKL 166
>gi|121602891|ref|YP_989277.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
bacilliformis KC583]
gi|421761080|ref|ZP_16197885.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
bacilliformis INS]
gi|166223664|sp|A1UTH4.1|RL25_BARBK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120615068|gb|ABM45669.1| ribosomal protein L25, Ctc-form [Bartonella bacilliformis KC583]
gi|411173490|gb|EKS43534.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
bacilliformis INS]
Length = 205
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ D++ P + E +
Sbjct: 5 YTLKAEVRERVGKGSSRELRRNGFIPAVIYG--------DKQPPLAISVPYKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T L+I G + +VLP D +++ F+ +
Sbjct: 51 FYKIHGGGFRTTIATLEI----GKEKI----QVLPKDYQLDPVRDFPMHVDFLRVSAKSI 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F ++ PG+K+GG L +R ++ PA I I++D+S+ IGD + +S
Sbjct: 103 VHVNIPVHFLNEDTAPGIKRGGVLNIVRHEIECTAPANAIPDAIQIDLSSYSIGDSIHIS 162
Query: 207 DIEVHPSWKLLSKNEKMPLCKISA 230
+++ + ++ + I+A
Sbjct: 163 AVQLPEGVTPVIQDRNFTIATIAA 186
>gi|298292447|ref|YP_003694386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Starkeya
novella DSM 506]
gi|296928958|gb|ADH89767.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Starkeya
novella DSM 506]
Length = 212
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 22/182 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G + +R GR+PAV++ D ++P ++ + +I+ I+
Sbjct: 7 LKATARAKVGKGAARAERRAGRVPAVIYG--------DGKAPVG---ITLDHVEINKIIY 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F +T F + + +V+P D L++ F+ G L
Sbjct: 56 AGH---FLTTLFNVDVDG--------QKHRVIPRDYQLDPVKDFPLHVDFLRVAVGATLT 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VDVPV F E+ P LK+GG L + ++ PAE I IEVD++ GD + +S I
Sbjct: 105 VDVPVHFLNQETAPALKQGGTLNIVSHAVSLNVPAEAIPEAIEVDLTKYGFGDSIHLSAI 164
Query: 209 EV 210
++
Sbjct: 165 KL 166
>gi|303327047|ref|ZP_07357489.1| ribosomal protein L25, Ctc-form [Desulfovibrio sp. 3_1_syn3]
gi|345890985|ref|ZP_08841846.1| 50S ribosomal protein L25 [Desulfovibrio sp. 6_1_46AFAA]
gi|302863035|gb|EFL85967.1| ribosomal protein L25, Ctc-form [Desulfovibrio sp. 3_1_syn3]
gi|345048710|gb|EGW52533.1| 50S ribosomal protein L25 [Desulfovibrio sp. 6_1_46AFAA]
Length = 205
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 82/183 (44%), Gaps = 21/183 (11%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ RE G S R RSQ IP V + +N ++P+ L
Sbjct: 6 TLSVQKREDCGKGPSGRLRSQELIPGVFYTGK--GENITVQAPTLP-------------L 50
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + +T F L+I S + VL +V R ++ F D E+
Sbjct: 51 EKLYEEVGHTTVFNLEIDENGQKS----THPVLIWQVQRHPYKKCFTHIDFYGVDLNKEV 106
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KVDVP+ F GV G+K GG L++ R S++ + KI +DVS++DI D V M+D
Sbjct: 107 KVDVPLEFVGVSR--GVKLGGVLETYRESVRLSSKPLDMPKKITIDVSDMDINDTVNMAD 164
Query: 208 IEV 210
+++
Sbjct: 165 LQL 167
>gi|75676696|ref|YP_319117.1| 50S ribosomal protein L25 [Nitrobacter winogradskyi Nb-255]
gi|109893373|sp|Q3SPM6.1|RL25_NITWN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|74421566|gb|ABA05765.1| LSU ribosomal protein L25P [Nitrobacter winogradskyi Nb-255]
Length = 228
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 55/104 (52%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ +G ++V VP+ + PG+K+GG + + ++
Sbjct: 74 RVIPRDFHLDPVKDFPIHVDFMRLGEGATIRVSVPLRLLKADVAPGVKRGGTVNLVTHAI 133
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
C AE I IE DV L+I + +SD+++ P K L++ +
Sbjct: 134 DVECAAESIPQFIEADVGALEISHSLHLSDLQLPPGVKPLARED 177
>gi|381201652|ref|ZP_09908777.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingobium
yanoikuyae XLDN2-5]
gi|427407627|ref|ZP_18897829.1| 50S ribosomal protein L25 [Sphingobium yanoikuyae ATCC 51230]
gi|425714131|gb|EKU77142.1| 50S ribosomal protein L25 [Sphingobium yanoikuyae ATCC 51230]
Length = 203
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 22/203 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G S R +GR+PAV++ N + S + E K ++ L
Sbjct: 6 TLSAEARDRAGKGASRALRREGRVPAVIYGM-----NEEPLS------IHVEEKLLNKQL 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ FF S + + G G +V + L V T R L+ F+ + +
Sbjct: 55 GTGH--FFNSV---IMVEVG-GKTV-----RTLAKDVAFHPVTDRPLHADFLRVSEHATV 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VPV F+ ++ PGLKKGG L +R ++ + A I + VD+ ++GD + +S
Sbjct: 104 TVAVPVRFENEDASPGLKKGGVLNVVRHDVELVVDAAEIPDDVVVDLKGFEVGDSIHISA 163
Query: 208 IEVHPSWKLLSKNEKMPLCKISA 230
+ + K ++ + I A
Sbjct: 164 VTLPKGAKAAIEDRDFTIATIVA 186
>gi|253997198|ref|YP_003049262.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylotenera
mobilis JLW8]
gi|253983877|gb|ACT48735.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylotenera
mobilis JLW8]
Length = 202
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 93/219 (42%), Gaps = 32/219 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A+ R+ G+ S R R G +P VV+ K+ + K++ R +
Sbjct: 5 INAVKRDAKGTGASRRLRHAGSVPGVVYGGG---KDAYPLEINAKELFLQFRHEA----- 56
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F ++ L I G SVLL ++ P++ I ++ F ++
Sbjct: 57 ------FHASVLTLIIE-GKKESVLLRDFQMHPVR-------NTIQHVDFQRVSATEKIH 102
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP F ++ PG+K GG + I+T C A+ + IEVDVS L++G + +S
Sbjct: 103 VKVPFHFTNADAAPGVKLGGGIVAHIQTEADVSCLAKDLPEFIEVDVSALEVGQSIHLSQ 162
Query: 208 IEVHPSWKL--LSKNEKMPLCKI-------SATKLENPE 237
I++ + L+ + + I SAT E PE
Sbjct: 163 IKLPKGVEFVQLAHGDDAAVASIAKTRGSVSATAEETPE 201
>gi|386398380|ref|ZP_10083158.1| ribosomal protein L25, Ctc-form [Bradyrhizobium sp. WSM1253]
gi|385739006|gb|EIG59202.1| ribosomal protein L25, Ctc-form [Bradyrhizobium sp. WSM1253]
Length = 239
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 56/104 (53%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ +G +++ VP+ E PG+K+GG + + ++
Sbjct: 74 RVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKAEGSPGVKRGGAVNIVAHAI 133
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ C E+I IE DV +L+IG + +SDI++ K L+ +
Sbjct: 134 ELECGVENIPQFIEADVGSLEIGHSLHLSDIKLPAGVKALTSED 177
>gi|94500015|ref|ZP_01306550.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bermanella
marisrubri]
gi|94427873|gb|EAT12848.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Oceanobacter
sp. RED65]
Length = 211
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 89/186 (47%), Gaps = 24/186 (12%)
Query: 27 HTIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
+ + A RE G+ S R R +G+ PA+V+ D + P + + Q+
Sbjct: 4 YELNAEVREVKGTGASRRLRREEGKTPAIVYGGD--------KEPQQVTL------QLKE 49
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ K+ E F S L + G+ +V++ V R ++++ F+ T
Sbjct: 50 LKKAFEDETFFSHIIKLNV-GGTAETVIVKD-------VQRHPYQNLVMHVDFLRVSKST 101
Query: 146 ELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
+K +P+ F ++C G+K +GG + T ++ +C A + IEVD++++++G +
Sbjct: 102 VIKQHIPLHFLNEDTCKGVKLQGGKITHNMTDIEVICEAGKLPEFIEVDLADVEVGTVLH 161
Query: 205 MSDIEV 210
+SD+++
Sbjct: 162 LSDLKL 167
>gi|92118571|ref|YP_578300.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrobacter
hamburgensis X14]
gi|122417117|sp|Q1QIV7.1|RL25_NITHX RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91801465|gb|ABE63840.1| LSU ribosomal protein L25P [Nitrobacter hamburgensis X14]
Length = 233
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ +G ++V +P+ + PG+K+GG + + ++
Sbjct: 74 RVIPRDFHLDPVKDFPIHVDFLRLGEGATIRVSIPIRLLKADVAPGVKRGGTVNLVIHAI 133
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKI 228
C A+ I IE DV L++ + +SD+E+ P K L++ E M L I
Sbjct: 134 DVECAADDIPQFIEADVGGLEMSHSLHLSDVELPPGVKPLAR-EDMTLVTI 183
>gi|423713671|ref|ZP_17687931.1| 50S ribosomal protein L25 [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395422142|gb|EJF88358.1| 50S ribosomal protein L25 [Bartonella vinsonii subsp. arupensis
OK-94-513]
Length = 208
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPA+++ + ++ P + E I
Sbjct: 5 YTLKAEIRERVGKGSSRELRRNGLIPAIIYGE--------KQPPLAITVPYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T L I G + VLP D L++ F+ +
Sbjct: 51 FYKIHAGGFRTTIATLVI----GKQKI----TVLPKDYQLDPVRDFPLHVDFLRISAKSV 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++V++PV F ++ PGLKKGG L +R ++ PA I IE+D+++ IGD + +S
Sbjct: 103 VEVNIPVHFLNEDTAPGLKKGGVLNIVRHEIECTAPANAIPEAIEIDLASYSIGDSIHIS 162
Query: 207 DIEVHPSWKLLSKNEKMPLCKISA 230
+++ + ++ + I+A
Sbjct: 163 AVQLPEGVTPVIQDRDFTIATIAA 186
>gi|395793134|ref|ZP_10472539.1| 50S ribosomal protein L25 [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|395431448|gb|EJF97466.1| 50S ribosomal protein L25 [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 208
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 90/204 (44%), Gaps = 22/204 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPA+++ + ++ P + E I
Sbjct: 5 YTLKAEIRERVGKGSSRELRRNGLIPAIIYGE--------KQPPLAITVPYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T L I G + VLP D L++ F+ +
Sbjct: 51 FYKIHAGGFRTTIATLVI----GKQKI----TVLPKDYQLDPVRDFPLHVDFLRISAKSV 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++V++PV F ++ PGLKKGG L +R ++ PA I IE+D+++ IGD + +S
Sbjct: 103 VEVNIPVHFLNEDTAPGLKKGGVLNIVRHEIECTAPANAIPEAIEIDLASYSIGDSIHIS 162
Query: 207 DIEVHPSWKLLSKNEKMPLCKISA 230
+++ + ++ + I+A
Sbjct: 163 AVQLPEGVTPVIQDRDFTIATIAA 186
>gi|189499938|ref|YP_001959408.1| 50S ribosomal protein L25/general stress protein Ctc [Chlorobium
phaeobacteroides BS1]
gi|226736296|sp|B3EPZ5.1|RL25_CHLPB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189495379|gb|ACE03927.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlorobium
phaeobacteroides BS1]
Length = 209
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 80/180 (44%), Gaps = 28/180 (15%)
Query: 33 PRECTGSRVSARDRSQGRIPAVVF--AQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
PR+C + + R QG++PAVV+ ++ + D RS +K + S+E I
Sbjct: 10 PRDCD-KNAAKKLRDQGKVPAVVYHKGEETIHICVDERS-LKKLVHSSESHLI------- 60
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
TFP G L + P+ T +I++ F + G L++D
Sbjct: 61 ------DLTFP----DGKEKRSFLKEVQFDPV-------TDKIIHADFQFFSAGEVLEMD 103
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
VP F G PG+ GG ++ I SLK +I I +DVS +++G + + +I V
Sbjct: 104 VPTTFIGEGEAPGVVAGGNVQVILHSLKVKAVPSNIPQHITIDVSGMELGQTMHIREIPV 163
>gi|395783967|ref|ZP_10463815.1| 50S ribosomal protein L25 [Bartonella melophagi K-2C]
gi|395425235|gb|EJF91405.1| 50S ribosomal protein L25 [Bartonella melophagi K-2C]
Length = 204
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 89/204 (43%), Gaps = 22/204 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ D++ P + E I
Sbjct: 5 YTLKAEIRERVGKGSSRELRRNGLIPAVIYG--------DKQPPLAIAVSYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T +++ +VLP D +++ F+ + +
Sbjct: 51 FYKIHAGGFRTTVATIEVDK--------KRIQVLPKDYQLDPVRDFPMHVDFLRVSEKSI 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F ++ PG+K+GG L +R ++ PA I I +D+S+ IGD + +S
Sbjct: 103 VHVNIPVHFLNEDTAPGIKRGGVLNIVRHEIECTAPANAIPEAINIDLSSYSIGDSIHIS 162
Query: 207 DIEVHPSWKLLSKNEKMPLCKISA 230
+++ + ++ + I+A
Sbjct: 163 AVQLPEGVTPVIQDRDFTIATIAA 186
>gi|374577976|ref|ZP_09651072.1| ribosomal protein L25, Ctc-form [Bradyrhizobium sp. WSM471]
gi|374426297|gb|EHR05830.1| ribosomal protein L25, Ctc-form [Bradyrhizobium sp. WSM471]
Length = 239
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 56/104 (53%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ +G +++ VP+ E PG+K+GG + + ++
Sbjct: 74 RVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKAEGSPGVKRGGAVNIVAHAI 133
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ C E+I IE DV +L+IG + +SDI++ K L+ +
Sbjct: 134 ELECGVENIPQFIEADVGSLEIGHSLHLSDIKLPAGVKALTAED 177
>gi|452125963|ref|ZP_21938546.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
holmesii F627]
gi|452129325|ref|ZP_21941901.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
holmesii H558]
gi|451921058|gb|EMD71203.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
holmesii F627]
gi|451925195|gb|EMD75335.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
holmesii H558]
Length = 197
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 72/181 (39%), Gaps = 22/181 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
A R GS S R R GR+PA+V+ N + +I RK+
Sbjct: 3 FNATARSVQGSSASRRLRRAGRVPAIVYGGTATPLNIEM---DHNEIFHALRKEQ----- 54
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F ++ + + G VLL S + P K +++++ F D L
Sbjct: 55 ------FHASILTMALEGGKSEQVLLRSVQWHPYK-------QQVMHVDFQRVDANQALH 101
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VP+ F E+ P +K G + + T ++ C + + IEVD+ NL G V D
Sbjct: 102 TKVPLHFINAETSPAVKLSGAIISHVVTEVEVTCLPKALPQFIEVDLGNLLGGGSVHQKD 161
Query: 208 I 208
I
Sbjct: 162 I 162
>gi|428169016|gb|EKX37954.1| hypothetical protein GUITHDRAFT_165347 [Guillardia theta CCMP2712]
Length = 294
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 42/68 (61%)
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
+ G ++ +D+P V E PGL++GG L T +K +C + + KIEVDV +++GD
Sbjct: 196 EKGQQVLLDIPFVSVNTERSPGLRRGGLLNISMTKVKVICTSYDVPDKIEVDVGWMEVGD 255
Query: 202 RVFMSDIE 209
++F+ + +
Sbjct: 256 KIFVKNFK 263
>gi|395786698|ref|ZP_10466425.1| 50S ribosomal protein L25 [Bartonella tamiae Th239]
gi|423716408|ref|ZP_17690598.1| 50S ribosomal protein L25 [Bartonella tamiae Th307]
gi|395422996|gb|EJF89192.1| 50S ribosomal protein L25 [Bartonella tamiae Th239]
gi|395429337|gb|EJF95405.1| 50S ribosomal protein L25 [Bartonella tamiae Th307]
Length = 210
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 22/184 (11%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ D+++P + E +
Sbjct: 5 YTLKAEARERVGKGSSRELRRNGLIPAVIYG--------DKQAPIAIAVPYKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T ++I +VLP D +++ F+ +
Sbjct: 51 FYKIHGGGFRTTVATIEINN--------QKIQVLPKDYQLDPVRDFPMHVDFLRVSAKSV 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F E+ PG+K GG L +R ++ PA I IE+D++ ++GD + +S
Sbjct: 103 VTVEIPVRFLNEEAAPGIKLGGVLNIVRHEVEVTAPANSIPDSIEIDLTGYEVGDSIHIS 162
Query: 207 DIEV 210
+++
Sbjct: 163 AVKL 166
>gi|27382552|ref|NP_774081.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 110]
gi|71153127|sp|Q89DJ8.1|RL25_BRAJA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|27355724|dbj|BAC52706.1| 50S ribosomal protein L25 [Bradyrhizobium japonicum USDA 110]
Length = 238
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 57/104 (54%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ +G +++ VP+ E+ PG+K+GG + + ++
Sbjct: 75 RVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKSEASPGVKRGGTVNIVAHAI 134
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ C E I IE DV +L+IG + +SD+++ K L++ +
Sbjct: 135 ELECGVESIPQYIEADVGSLEIGHSLHLSDVKLPAGVKALTRED 178
>gi|237654284|ref|YP_002890598.1| 50S ribosomal protein L25/general stress protein Ctc [Thauera sp.
MZ1T]
gi|237625531|gb|ACR02221.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thauera sp.
MZ1T]
Length = 200
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+A R+ G+ S R R GRIP +++ Q +S + +++ +L+
Sbjct: 5 FKATKRDAQGTGASRRLRRAGRIPGILYG-----------GAGETQPVSMDHNELYHLLR 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F ++ +++ ++VL D ++ H ++ ++L+L F G ++
Sbjct: 54 K---EAFHASVLSIEVDGAKQNAVLRD------VQWHPFKQ--QVLHLDFQRIAAGEKMH 102
Query: 149 VDVPVVFKGVESCPGLKKGGYLKS-IRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VP+ F G + P +K GG + S L C + IEVD+S L+ G V +S
Sbjct: 103 LKVPLHFVGADVAPAVKLGGCMISHTINELDVQCLPTDLPEFIEVDLSALEAGQSVHVSQ 162
Query: 208 IEVHPSWKLLSKNEKMPLCKISATKLE 234
I++ +L+ E P + AT L+
Sbjct: 163 IKLPAGVELVQHGEGDP---VVATALQ 186
>gi|330813694|ref|YP_004357933.1| 50S ribosomal protein L25 [Candidatus Pelagibacter sp. IMCC9063]
gi|327486789|gb|AEA81194.1| LSU ribosomal protein L25p [Candidatus Pelagibacter sp. IMCC9063]
Length = 237
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 23/213 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+++A RE + R G +P V++ D T+ + L+ ++ + +L
Sbjct: 7 SLEANIRETKTKSDIKKLRIDGFVPGVLYG----DVETNFK-------LAVKKNALEKLL 55
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K + F ST +++ AG KVLP + ++ T + +++ F GT++
Sbjct: 56 K---IGNFMSTVIDIKV-AGK-------EYKVLPRDIEFNKLTNQPIHVDFQKISAGTKV 104
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V +PV F CPGLK GG L +R ++ CPA+ I ++ D+ + + + +S
Sbjct: 105 VVWIPVKFINESICPGLKMGGVLNIVRRKVELNCPADQIPAELVCDLGEKQLNESIHISS 164
Query: 208 IEVHPSWKLLSKNEKMPLCKISA-TKLENPEPA 239
I++ + K + + ++A T ++ PEP
Sbjct: 165 IKLPENVKPTILDRDFTIATVAAPTVVKEPEPG 197
>gi|421597665|ref|ZP_16041236.1| 50S ribosomal protein L25/general stress protein Ctc
[Bradyrhizobium sp. CCGE-LA001]
gi|404270227|gb|EJZ34336.1| 50S ribosomal protein L25/general stress protein Ctc
[Bradyrhizobium sp. CCGE-LA001]
Length = 239
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 57/104 (54%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ +G +++ VP+ E+ PG+K+GG + + ++
Sbjct: 75 RVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKAETSPGVKRGGTVNIVAHAI 134
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ C E I IE DV +L+IG + ++D+++ K L++ +
Sbjct: 135 ELECGVESIPQYIEADVGSLEIGHSLHLADVKLPAGVKALTRED 178
>gi|209886302|ref|YP_002290159.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM5]
gi|337740154|ref|YP_004631882.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM5]
gi|386029171|ref|YP_005949946.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM4]
gi|226736343|sp|B6JIP4.1|RL25_OLICO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|209874498|gb|ACI94294.1| ribosomal protein L25, Ctc-form [Oligotropha carboxidovorans OM5]
gi|336094239|gb|AEI02065.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM4]
gi|336097818|gb|AEI05641.1| 50S ribosomal protein L25 [Oligotropha carboxidovorans OM5]
Length = 240
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 46/75 (61%)
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
L++ F+ +G ++V VP+ KG E PG+K+GG + + +++ +HI IEVD
Sbjct: 90 LHVDFLRLGEGATIRVSVPLHVKGAELSPGVKRGGTVNIVNHTVELEAEVDHIPQFIEVD 149
Query: 194 VSNLDIGDRVFMSDI 208
VS L+I + V ++D+
Sbjct: 150 VSKLEINNSVHLNDV 164
>gi|159043502|ref|YP_001532296.1| 50S ribosomal protein L25/general stress protein Ctc
[Dinoroseobacter shibae DFL 12]
gi|189042354|sp|A8LRY8.1|RL25_DINSH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|157911262|gb|ABV92695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Dinoroseobacter shibae DFL 12]
Length = 211
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A PR TG + + R G +P VV+ P QI + + +L+ +
Sbjct: 10 AEPRAGTGKGAARQARRDGYVPGVVYGGGA--------DPQPIQI------KFNELLRRL 55
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
+ F +T F L++ + +V+ V RD +L + +++ +
Sbjct: 56 KAGRFMATLFNLKVEG-------QEDVRVICRNVQRDVVKDLPTHLDLMRLRRTSKVNLF 108
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+PV F + PG+KKGG L ++R ++ A I I VD++ LDIGD V +S +
Sbjct: 109 IPVEFINEGAAPGIKKGGVLTAVRPEVELRVTAGDIPESITVDLTGLDIGDTVTISSV 166
>gi|398848314|ref|ZP_10605135.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM84]
gi|398248754|gb|EJN34155.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM84]
Length = 198
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 84/181 (46%), Gaps = 24/181 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G S R R IPAVV+ D Q L+ K+I + +
Sbjct: 6 LNAQARTDLGKGASRRLRHSANIPAVVYGGD-----------KEAQSLTIVAKEIAKLFE 54
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ E F S L + G+ +V++ + + P K G I++ FV G +L
Sbjct: 55 N-EAAF--SHVIELNVD-GAKQNVVVKAMQRHPAK-------GFIMHADFVRVVAGQKLT 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV F G E P +KKGG + + + ++ C A+ + IEVD++N ++G + +SD+
Sbjct: 104 AKVPVHFVG-EEAP-IKKGGEISHVVSEIEVSCEAKDLPEFIEVDLANAEVGSIIHLSDL 161
Query: 209 E 209
+
Sbjct: 162 K 162
>gi|409402261|ref|ZP_11251851.1| 50S ribosomal protein L25/general stress protein Ctc [Acidocella
sp. MX-AZ02]
gi|409129121|gb|EKM98988.1| 50S ribosomal protein L25/general stress protein Ctc [Acidocella
sp. MX-AZ02]
Length = 245
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 22/184 (11%)
Query: 26 YHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
+ I+A R G V+ R +G++PAV++ R+ PS +++ + + +
Sbjct: 32 FELIEASARSRAGKGVARATRREGKVPAVIYGA--------RQEPS---LIALDPR---T 77
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
++K ++ + S + + + AG+ + L+ P+ T + ++ F G
Sbjct: 78 VMKELKRGGWRSRLYEIDV-AGTKTRALMRDVSFHPV-------TDQPEHVDFQRLVAGE 129
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+KV V V F + PGLK+GG L +R ++ + A+HI K E+D+ LDI D V
Sbjct: 130 PVKVAVAVHFLNEATSPGLKRGGVLNVVRHKVEVVVDADHIPEKFEIDLGKLDINDNVRW 189
Query: 206 SDIE 209
D++
Sbjct: 190 HDLQ 193
>gi|289523178|ref|ZP_06440032.1| ribosomal protein L25, Ctc-form [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
gi|289503721|gb|EFD24885.1| ribosomal protein L25, Ctc-form [Anaerobaculum hydrogeniformans
ATCC BAA-1850]
Length = 219
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/186 (26%), Positives = 83/186 (44%), Gaps = 23/186 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G S R R +G +PAV + P K+ + + + IL +
Sbjct: 13 RENLGKNRSKRLRKEGYLPAVFYG------------PDYKEAVPV-KVSVDEILPHIHSS 59
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+ + F + G ++ RD + ++L++ F G + V VP+
Sbjct: 60 HWKTLMFNVIFPDGKKEMAMIRD-------YQRDPISRQVLHIDFYQLVKGHRVLVAVPI 112
Query: 154 VFKGVESCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
V ESC G+KKGG L +S+ + P E + +I VD++ LD+GD + +SDI + P
Sbjct: 113 VLINRESCLGVKKGGVLIQSLHELEMEVLPTE-MPDEIHVDIAGLDVGDSLRISDINL-P 170
Query: 213 SWKLLS 218
L+S
Sbjct: 171 ESALVS 176
>gi|269125253|ref|YP_003298623.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermomonospora curvata DSM 43183]
gi|268310211|gb|ACY96585.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermomonospora curvata DSM 43183]
Length = 200
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 30/201 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A PR G + R R G++PAV++ +P + L H ++
Sbjct: 6 IAAEPRTEFGKGAARRTRRAGKVPAVLYGHG---------TPPQHITLPG-----HDLML 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+++ P L++ G L LP V RD G + ++ + G ++
Sbjct: 52 ALKTPNVL-----LRLEGLPGGEEL-----ALPKDVQRDPIKGFLEHVDLLLVKRGEKVT 101
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V+VPVV G + GG L+ + A HI +EVDVS L +GD V D+
Sbjct: 102 VEVPVVATG-----DVVAGGRLEQPVIQVAVEAEATHIPETVEVDVSGLQVGDSVLAKDL 156
Query: 209 EVHPSWKLLSKNEKMPLCKIS 229
++ PS L+ +E+ + +I+
Sbjct: 157 KL-PSGVALAADEETLILQIA 176
>gi|374855865|dbj|BAL58720.1| 50S ribosomal protein L25/general stress protein Ctc [uncultured
candidate division OP1 bacterium]
Length = 241
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 100/212 (47%), Gaps = 37/212 (17%)
Query: 27 HTIQAIPRECTGSRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
+T+ PR GS+ + R R QGRIP V++ ++ ++ + K++
Sbjct: 3 YTVHVEPR---GSKPNPRALRRQGRIPGVLYGHEV------------HHPIAVDAKELEK 47
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPI---KVHRDEETGRILNLVFVWAD 142
+L +I S ++++D GK LP ++ D T R++++ F
Sbjct: 48 LLA--------------RITRSSRITLIMD-GKQLPAFIKEIQYDPLTDRVIHIDFYHPA 92
Query: 143 DGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDR 202
+ +DVPV G + G K+GG L+ +R +K P + I IE+DV+NL IG
Sbjct: 93 PDRPVTIDVPVRLHGEPA--GRKEGGVLQLLRDVVKVRGPMDAIPEIIEIDVTNLGIGQA 150
Query: 203 VFMSDIEVHPSWKLLSKNEKMPLCKISATKLE 234
V ++++++ ++L+ E + ++ K E
Sbjct: 151 VHVNELKLE-GVQVLTPGEATIVTVVAPRKEE 181
>gi|239825631|ref|YP_002948255.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacillus
sp. WCH70]
gi|259646689|sp|C5D373.1|RL25_GEOSW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|239805924|gb|ACS22989.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacillus
sp. WCH70]
Length = 210
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 35/180 (19%)
Query: 44 RDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQ 103
R R QG IP +++ KN D ++ F
Sbjct: 20 RIRLQGNIPGILYG-----KNIDN-----------------------QMIFVSGAALEKT 51
Query: 104 IRAGSGSSVL-LDSGK----VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGV 158
IR G S++ L G+ VL ++ RD G IL+ F D TE+ +DV V G
Sbjct: 52 IREGGRHSLMTLKIGEKDYSVLLREIQRDPLRGNILHADFQAVDMSTEVDIDVDVRLIG- 110
Query: 159 ESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
G K GG L+ L +I P I++D+S+L IGD V + DI ++++
Sbjct: 111 -EAAGEKDGGVLQQNLHQLTIRVLPANIPPSIDIDISHLQIGDTVTVGDINTGGKYEIID 169
>gi|390952362|ref|YP_006416121.1| 50S ribosomal protein L25 [Thiocystis violascens DSM 198]
gi|390428931|gb|AFL75996.1| ribosomal protein L25, Ctc-form [Thiocystis violascens DSM 198]
Length = 202
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 85/190 (44%), Gaps = 23/190 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A PR +G S R R G +PA+V+ L +++S ++ LK +
Sbjct: 9 AQPRALSGKGASRRLRRTGLVPAIVYGAHL-----------EPEMISVSHNEL---LKHL 54
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
E F S L+I + VL D + R IL++ F+ +L++
Sbjct: 55 EHEAFYSHVLDLKIGDVASKVVLKD--------MQRHPAKPFILHVDFMRVSQDEKLRMM 106
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
VP+ F E G+K GG T ++ +C + + I +D+ ++IGD V +S++++
Sbjct: 107 VPIHFLNEEKSKGVKIGGQASHKITEVEVICLPKDLPEFIAIDLLEMEIGDIVHLSELQM 166
Query: 211 HPSWKLLSKN 220
PS +L+
Sbjct: 167 -PSGVVLAHQ 175
>gi|308274567|emb|CBX31166.1| 50S ribosomal protein L25 [uncultured Desulfobacterium sp.]
Length = 211
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 87/177 (49%), Gaps = 25/177 (14%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G+ + R G IPAV++ K+T+ +LS K + ILK ++
Sbjct: 6 RESAGNGPARVLRRMGEIPAVIYGPG---KDTN--------LLSITIKDLEDILKKAKV- 53
Query: 94 FFCSTTFPLQIRAGS--GSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDV 151
++I+ G+ + ++ ++ P+ + +L++ F ++KV +
Sbjct: 54 --GQAILNIEIQNGALHTRTAMIKELQIHPV-------SRELLHVDFYEISMDRKIKVKI 104
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
PVV KG+ G+ GG L+ I+ ++ LC I IE+D+++L+IGD + ++D+
Sbjct: 105 PVVTKGI--AKGIDFGGMLQIIKREIEILCLPVGIPESIEIDITDLNIGDSIHVNDL 159
>gi|407716988|ref|YP_006838268.1| 50S ribosomal protein L25 [Cycloclasticus sp. P1]
gi|407257324|gb|AFT67765.1| 50S ribosomal protein L25 [Cycloclasticus sp. P1]
Length = 216
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%)
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
LKV VP+ F G E PG K+GG + ++ C ++ IEVDVS L+IGD + +S
Sbjct: 103 LKVHVPIHFIGEEEAPGAKQGGVVTHSLVDVEIQCLPNNLPEFIEVDVSALEIGDSLHLS 162
Query: 207 DIEVHPSWKLLS 218
DI++ ++++
Sbjct: 163 DIKLADGLEMVA 174
>gi|218660335|ref|ZP_03516265.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli IE4771]
Length = 152
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 49/91 (53%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP D +++ F+ T++ V++PV F E GLK GG L +R S+
Sbjct: 25 KVLPKDYQLDPVRDFTMHVDFLRVSGNTQVTVEIPVHFINEEKSQGLKVGGVLNIVRHSV 84
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ CPA+ I ++D+S IGD + +S++
Sbjct: 85 EVHCPADAIPEFFDIDLSGKKIGDSIHISEV 115
>gi|16799320|ref|NP_469588.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
innocua Clip11262]
gi|422411571|ref|ZP_16488530.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL S4-378]
gi|422414645|ref|ZP_16491602.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL J1-023]
gi|423100946|ref|ZP_17088650.1| ribosomal protein L25, Ctc-form [Listeria innocua ATCC 33091]
gi|71153149|sp|Q92F64.1|RL25_LISIN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|16412672|emb|CAC95476.1| ctc [Listeria innocua Clip11262]
gi|117957151|gb|ABK59047.1| Ctc [Listeria innocua]
gi|117957159|gb|ABK59054.1| Ctc [Listeria innocua]
gi|118723078|gb|ABL10242.1| general stress protein [Listeria innocua]
gi|118723086|gb|ABL10249.1| general stress protein [Listeria innocua]
gi|118723094|gb|ABL10256.1| general stress protein [Listeria innocua]
gi|118723102|gb|ABL10263.1| general stress protein [Listeria innocua]
gi|118723110|gb|ABL10270.1| general stress protein [Listeria innocua]
gi|118723118|gb|ABL10277.1| general stress protein [Listeria innocua]
gi|118723126|gb|ABL10284.1| general stress protein [Listeria innocua]
gi|313621020|gb|EFR92141.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL S4-378]
gi|313625452|gb|EFR95201.1| ribosomal protein L25, Ctc-form [Listeria innocua FSL J1-023]
gi|370792482|gb|EHN60349.1| ribosomal protein L25, Ctc-form [Listeria innocua ATCC 33091]
Length = 207
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 37/220 (16%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++ RE T R RS+G++P +++ S +S + ++ +
Sbjct: 4 TLEVQKRETTQHSEVTRLRSEGKVPGIIYGYK-----------SENVPVSVDSLELIKAV 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDG 144
+ S T G +VLL +V P+K VH D + D
Sbjct: 53 RDNGRNAVFSVTV-----DGKKLNVLLHEYQVDPLKDVLVHVD----------LLAVDMN 97
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
E++ DV VV G PG+K GG L+ I +K E + IE+D+S+L+IGD +
Sbjct: 98 EEVETDVRVVLVG--DAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLT 155
Query: 205 MSDIEVHPSWKLLSKNEK------MPLCKISATKLENPEP 238
+D+ + + + ++ E+ P + T E PEP
Sbjct: 156 TNDLPENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEP 195
>gi|68053213|sp|Q88PX7.2|RL25_PSEPK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
Length = 197
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 24/181 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R G S R R IPAVV+ N D +S + IL+ E I
Sbjct: 5 TLNAQARTDLGKGASRRLRHSANIPAVVYG-----GNQDAQSLT---ILAKE------IT 50
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K E S L + G+ +V++ + + P K G I++ FV G +L
Sbjct: 51 KLFENEAAFSHVLELNVD-GAKQNVVVKALQRHPAK-------GFIMHADFVRVVAGQKL 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VPV F E P +KKGG + + + ++ C A+ + IEVD++N +IG + +SD
Sbjct: 103 TAKVPVHFIN-EEAP-VKKGGEISHVESEIEVSCEAKDLPEFIEVDLANAEIGTIIHLSD 160
Query: 208 I 208
+
Sbjct: 161 L 161
>gi|428204194|ref|YP_007082783.1| 50S ribosomal protein L25 [Pleurocapsa sp. PCC 7327]
gi|427981626|gb|AFY79226.1| ribosomal protein L25, Ctc-form [Pleurocapsa sp. PCC 7327]
Length = 201
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 73/168 (43%), Gaps = 11/168 (6%)
Query: 41 VSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTF 100
V R R +G P + Q L+ + L+ K + +L+ F +T
Sbjct: 5 VECRKRPEGSKPNALRRQGLIPAALYGHQGAESVSLTINEKDAYFLLRRA---FVNNTLV 61
Query: 101 PLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVES 160
LQI L +GKVL +V + +L F ++V VP V
Sbjct: 62 DLQIPD------LPWNGKVLIREVQAHPWKKTLYHLSFFSVAAHASIEVTVP--LNPVGD 113
Query: 161 CPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
PG+K+GG L+ + T L C + I IE+D+SNL IGD V +S++
Sbjct: 114 APGVKQGGILEQMLTELTVECAPDRIPASIEIDISNLYIGDSVQVSEL 161
>gi|399073436|ref|ZP_10750484.1| ribosomal protein L25, Ctc-form [Caulobacter sp. AP07]
gi|398041802|gb|EJL34857.1| ribosomal protein L25, Ctc-form [Caulobacter sp. AP07]
Length = 199
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 45/64 (70%)
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+K+ VPV FK + G+KKGG L+ +R +++ CPA+ I ++ +D+++ DIGD + +S
Sbjct: 102 IKIQVPVHFKNHDISVGMKKGGSLEIVRHTVELACPADAIPEELVIDLAHHDIGDTIRIS 161
Query: 207 DIEV 210
++++
Sbjct: 162 EVKL 165
>gi|187477047|ref|YP_785071.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
avium 197N]
gi|109893346|sp|Q2KYA2.1|RL25_BORA1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|115421633|emb|CAJ48143.1| 50S ribosomal protein L25 [Bordetella avium 197N]
Length = 198
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 22/179 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R GR+PA+V+ N + +I RK+
Sbjct: 5 ATLRSVQGTSASRRLRRAGRVPAIVYGGTAAPLNIEL---DHNEIFHALRKEQ------- 54
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F ++ + + G+ VLL S + P K ++L++ F D L
Sbjct: 55 ----FHASILTMALEGGANEQVLLRSVQWHPFK-------QQVLHVDFQRVDANQALHTK 103
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VP+ F E+ P +K G + + T ++ C + + IEVD+ NL G + DI
Sbjct: 104 VPLHFVNAETSPAVKLSGAIISHVVTEVEVTCLPQSLPQFIEVDLGNLLGGGSIHQKDI 162
>gi|16802257|ref|NP_463742.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes EGD-e]
gi|46906443|ref|YP_012832.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes serotype 4b str. F2365]
gi|47093153|ref|ZP_00230928.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes str. 4b H7858]
gi|47096204|ref|ZP_00233803.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes str. 1/2a F6854]
gi|217965703|ref|YP_002351381.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes HCC23]
gi|226222840|ref|YP_002756947.1| general stress protein [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|254825875|ref|ZP_05230876.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL J1-194]
gi|254829302|ref|ZP_05233989.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL N3-165]
gi|254854441|ref|ZP_05243789.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL R2-503]
gi|254913928|ref|ZP_05263940.1| general stress protein Ctc [Listeria monocytogenes J2818]
gi|254933051|ref|ZP_05266410.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes HPB2262]
gi|254938281|ref|ZP_05269978.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes F6900]
gi|254992856|ref|ZP_05275046.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes FSL J2-064]
gi|255026020|ref|ZP_05298006.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes FSL J2-003]
gi|255028168|ref|ZP_05300119.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes LO28]
gi|255520467|ref|ZP_05387704.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes FSL J1-175]
gi|284803050|ref|YP_003414915.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes 08-5578]
gi|284996191|ref|YP_003417959.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes 08-5923]
gi|290894281|ref|ZP_06557248.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL J2-071]
gi|300766344|ref|ZP_07076303.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL N1-017]
gi|386006940|ref|YP_005925218.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes L99]
gi|386025520|ref|YP_005946296.1| ribosomal protein L25 (general stress protein Ctc) [Listeria
monocytogenes M7]
gi|386042548|ref|YP_005961353.1| 50S ribosomal protein L25 Ctc-form [Listeria monocytogenes 10403S]
gi|386045849|ref|YP_005964181.1| 50S ribosomal protein L25 Ctc-form [Listeria monocytogenes J0161]
gi|386049140|ref|YP_005967131.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL R2-561]
gi|386052488|ref|YP_005970046.1| 50S ribosomal protein L25 [Listeria monocytogenes Finland 1998]
gi|386730976|ref|YP_006204472.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes 07PF0776]
gi|404279761|ref|YP_006680659.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2755]
gi|404282642|ref|YP_006683539.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2372]
gi|404285578|ref|YP_006692164.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|404406664|ref|YP_006689379.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2376]
gi|404409444|ref|YP_006695032.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC5850]
gi|404412311|ref|YP_006697898.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC7179]
gi|405748553|ref|YP_006672019.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes ATCC 19117]
gi|405751427|ref|YP_006674892.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2378]
gi|405757198|ref|YP_006686474.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2479]
gi|406702983|ref|YP_006753337.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes L312]
gi|417314256|ref|ZP_12100961.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes J1816]
gi|417318672|ref|ZP_12105245.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes J1-220]
gi|424713075|ref|YP_007013790.1| 50S ribosomal protein L25 [Listeria monocytogenes serotype 4b str.
LL195]
gi|424821940|ref|ZP_18246953.1| 50S ribosomal protein L25 [Listeria monocytogenes str. Scott A]
gi|71153150|sp|Q724K2.1|RL25_LISMF RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153151|sp|Q8YAD3.1|RL25_LISMO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|16409576|emb|CAD00738.1| ctc [Listeria monocytogenes EGD-e]
gi|46879707|gb|AAT03009.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes serotype 4b str. F2365]
gi|47015452|gb|EAL06386.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes str. 1/2a F6854]
gi|47018460|gb|EAL09218.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes serotype 4b str. H7858]
gi|118420012|gb|ABK88268.1| general stress protein Ctc [Listeria monocytogenes]
gi|217334973|gb|ACK40767.1| ribosomal protein L25, Ctc-form [Listeria monocytogenes HCC23]
gi|225875302|emb|CAS03999.1| Putative general stress protein [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|258601715|gb|EEW15040.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL N3-165]
gi|258607841|gb|EEW20449.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL R2-503]
gi|258610892|gb|EEW23500.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes F6900]
gi|284058612|gb|ADB69553.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes 08-5578]
gi|284061658|gb|ADB72597.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes 08-5923]
gi|290556165|gb|EFD89712.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL J2-071]
gi|293584609|gb|EFF96641.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes HPB2262]
gi|293591946|gb|EFG00281.1| general stress protein Ctc [Listeria monocytogenes J2818]
gi|293595114|gb|EFG02875.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL J1-194]
gi|300512943|gb|EFK40031.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL N1-017]
gi|307569750|emb|CAR82929.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes L99]
gi|328467967|gb|EGF38994.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes J1816]
gi|328469739|gb|EGF40661.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes J1-220]
gi|332310620|gb|EGJ23715.1| 50S ribosomal protein L25 [Listeria monocytogenes str. Scott A]
gi|336022101|gb|AEH91238.1| ribosomal protein L25 (general stress protein Ctc) [Listeria
monocytogenes M7]
gi|345532840|gb|AEO02281.1| 50S ribosomal protein L25 Ctc-form [Listeria monocytogenes J0161]
gi|345535782|gb|AEO05222.1| 50S ribosomal protein L25 Ctc-form [Listeria monocytogenes 10403S]
gi|346422986|gb|AEO24511.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes FSL R2-561]
gi|346645139|gb|AEO37764.1| 50S ribosomal protein L25 [Listeria monocytogenes Finland 1998]
gi|384389734|gb|AFH78804.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes 07PF0776]
gi|404217753|emb|CBY69117.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes ATCC 19117]
gi|404220627|emb|CBY71990.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2378]
gi|404226396|emb|CBY47801.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2755]
gi|404229270|emb|CBY50674.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC5850]
gi|404232144|emb|CBY53547.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2372]
gi|404235080|emb|CBY56482.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2479]
gi|404238010|emb|CBY59411.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC7179]
gi|404240813|emb|CBY62213.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2376]
gi|404244507|emb|CBY02732.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes serotype 7 str. SLCC2482]
gi|406360013|emb|CBY66286.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes L312]
gi|424012259|emb|CCO62799.1| 50S ribosomal protein L25 [Listeria monocytogenes serotype 4b str.
LL195]
gi|441469759|emb|CCQ19514.1| 50S ribosomal protein L25 [Listeria monocytogenes]
gi|441472895|emb|CCQ22649.1| 50S ribosomal protein L25 [Listeria monocytogenes N53-1]
Length = 207
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 37/220 (16%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++ RE T R RS+G++P +++ S +S + ++ +
Sbjct: 4 TLEVQKRETTQHSEVTRLRSEGKVPGIIYGYK-----------SENVPVSVDSLELIKAV 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDG 144
+ S T G +VLL +V P+K VH D + D
Sbjct: 53 RDNGRNAVFSVTV-----DGKKLNVLLHEYQVDPLKDVLVHVD----------LLAVDMN 97
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
E++ DV VV G PG+K GG L+ I +K E + IE+D+S+L+IGD +
Sbjct: 98 EEVETDVRVVLVG--DAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLT 155
Query: 205 MSDIEVHPSWKLLSKNEK------MPLCKISATKLENPEP 238
+D+ + + + ++ E+ P + T E PEP
Sbjct: 156 TNDLPENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEP 195
>gi|86136043|ref|ZP_01054622.1| ribosomal protein L25 [Roseobacter sp. MED193]
gi|85826917|gb|EAQ47113.1| ribosomal protein L25 [Roseobacter sp. MED193]
Length = 209
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 78/177 (44%), Gaps = 21/177 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG + R G +P VV+ D P QI + +LK ++
Sbjct: 13 RAGTGKGAARAARRAGMVPGVVYGGD--------ADPLSIQI------PFNVLLKKLKAG 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ST + L++ V+ V RD +L + +E+ + +PV
Sbjct: 59 KFKSTLWNLKVEGQEDVRVICRD-------VQRDVVKDLPTHLDLMRLRRTSEINLFIPV 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
F ++CPG+KKGG L +R ++ + A I K+ VD++N IGD + +S IE+
Sbjct: 112 EFINEDTCPGVKKGGMLAVVRPEVELVVTAGDIPEKLTVDLANSQIGDVITISSIEL 168
>gi|398826814|ref|ZP_10585045.1| ribosomal protein L25, Ctc-form, partial [Bradyrhizobium sp. YR681]
gi|398220202|gb|EJN06659.1| ribosomal protein L25, Ctc-form, partial [Bradyrhizobium sp. YR681]
Length = 203
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 56/104 (53%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
+V+P H D +++ F+ +G +++ VP+ E+ PG+K+GG + + ++
Sbjct: 75 RVIPRDYHLDPVKDFPIHVDFMRLGEGATIRISVPLHVVKSEASPGVKRGGTVNIVAHAI 134
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ C E I IE DV L+IG + ++DI++ K L++ +
Sbjct: 135 ELECGVESIPQYIEADVGALEIGHSLHLTDIKLPAGVKALTRED 178
>gi|329897177|ref|ZP_08271917.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC3088]
gi|328921332|gb|EGG28726.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC3088]
Length = 210
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 77/164 (46%), Gaps = 23/164 (14%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R + +P VV+ + P ++S + I KS+E F S L
Sbjct: 25 RLENLVPGVVYGG--------HKDPVSVSVVSKD------IEKSLENEAFYSHVLTLNFG 70
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
+ S+VL D + R T ++++L F+ G +KV VP+ F ++C G+K
Sbjct: 71 DHTESAVLKD--------LQRHPATNKVVHLDFLRVVAGEAIKVQVPLHFTNEDTCKGVK 122
Query: 166 -KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
GG ++ T ++ C + I IEVD++N+++G V +SD+
Sbjct: 123 IGGGMVQHQMTEIEVSCLPKDIPEFIEVDMTNVEVGAIVHLSDL 166
>gi|398829009|ref|ZP_10587209.1| ribosomal protein L25, Ctc-form [Phyllobacterium sp. YR531]
gi|398217867|gb|EJN04384.1| ribosomal protein L25, Ctc-form [Phyllobacterium sp. YR531]
Length = 212
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 95/213 (44%), Gaps = 34/213 (15%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A RE G + R G++PAV++ D+++P
Sbjct: 2 SEAYELKAEARERVGKGSAREIRRNGKVPAVIYG--------DKKAPI------------ 41
Query: 84 HSILKSVELPFFCSTTFPLQIRAG----SGSSVLLD--SGKVLPIKVHRDEETGRILNLV 137
S+ L + T +I G + ++++LD S +VLP D + + +++
Sbjct: 42 -----SITLDY---KTLYYKIHGGGFKTTIANIILDGKSIQVLPKDYQLDPVSDKPVHVD 93
Query: 138 FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
F+ + + V VP+ F E PG+K+GG L +R ++ PA I IE+D++
Sbjct: 94 FLRVSAKSVVNVHVPIHFLNEELSPGIKRGGVLNIVRHDVELHAPANAIPEAIEIDLTGK 153
Query: 198 DIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISA 230
IGD + +S + + + ++ + I+A
Sbjct: 154 VIGDSIHISAVTLPKGVTSVIQDRDFTIATIAA 186
>gi|188581655|ref|YP_001925100.1| 50S ribosomal protein L25/general stress protein Ctc
[Methylobacterium populi BJ001]
gi|226736337|sp|B1Z970.1|RL25_METPB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|179345153|gb|ACB80565.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Methylobacterium populi BJ001]
Length = 228
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 83/192 (43%), Gaps = 35/192 (18%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S T++A+ R+ G + R QG+IPAV++ + ++P
Sbjct: 2 SATKTLEAVARDRVGKGAARAVRRQGQIPAVIYGGN--------QAP------------- 40
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLD---SGK---VLPIKVHRDEETGRILNLV 137
+++ + + T I AG + L D GK +P D +G L++
Sbjct: 41 ----EAIAVDLIRTRTL---IYAGGFKTTLFDITVGGKKTRAIPRDYQLDPVSGVPLHVD 93
Query: 138 FVWADDGTELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSN 196
F+ G + VDVPV F E PG+K KGG L ++ + I IEVD++
Sbjct: 94 FLRVVSGQTVTVDVPVHFVNDEKAPGIKQKGGTLNVALHTVSLDVAPDQIPDAIEVDLTG 153
Query: 197 LDIGDRVFMSDI 208
+IGD + SD+
Sbjct: 154 REIGDVIHASDL 165
>gi|212637894|ref|YP_002314414.1| 50S ribosomal protein L25/general stress protein Ctc [Anoxybacillus
flavithermus WK1]
gi|226736278|sp|B7GFH9.1|RL25_ANOFW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|212559374|gb|ACJ32429.1| Ribosomal protein L25 (general stress protein Ctc) [Anoxybacillus
flavithermus WK1]
Length = 208
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 78/177 (44%), Gaps = 37/177 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R QG IPAV++ + T P F + F Q+R
Sbjct: 22 RKQGHIPAVLYGK------TTNSQPV----------------------FVDAAEFLKQLR 53
Query: 106 AGSGSSVLLDSG------KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVE 159
A +G + LLD+ +++ + + I+++ F+ D TE+ V VP+ G
Sbjct: 54 A-TGGTGLLDAKMNDNHIRIIVRDMQKHPIRHDIIHIDFLAVDAKTEIDVHVPIHLVG-- 110
Query: 160 SCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
G+K GG L+ L +I P I+VD++NL +GD + +S I+ + ++++
Sbjct: 111 EAAGVKDGGVLQQAMHQLSIRVLPSNIPPSIDVDITNLQVGDVITVSHIQTNGAYEI 167
>gi|319654945|ref|ZP_08009019.1| 50S ribosomal protein L25 [Bacillus sp. 2_A_57_CT2]
gi|317393370|gb|EFV74134.1| 50S ribosomal protein L25 [Bacillus sp. 2_A_57_CT2]
Length = 216
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 88/192 (45%), Gaps = 27/192 (14%)
Query: 34 RECTGSRVSARD--RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVE 91
+E GSR S R +G IPAVV+ L + I +E LK+++
Sbjct: 8 KERKGSRNSNLTSLRKEGNIPAVVYGSKL----------HSQSIYLSEA----DFLKTIK 53
Query: 92 LPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDV 151
+ F L + GS V+L + PIK I++ F+ D E+ DV
Sbjct: 54 -EVGRNGVFSLDVD-GSKHEVVLGDYQSNPIK-------NEIVHADFLAVDMNKEMTADV 104
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
VV G G+K GG ++ + +I P +EVDV+NL + + + ++DI+ +
Sbjct: 105 RVVLTG--DAAGVKDGGVMQQSMHEVSVTATPNNIPPSVEVDVTNLQVNETLTVADIKAN 162
Query: 212 PSWKLLSKNEKM 223
+++ +++E++
Sbjct: 163 RGYEINNEDEEV 174
>gi|406941535|gb|EKD74001.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 236
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 22 TTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILS---T 78
T+ ++A RE G S R R ++PA+V+ + +Q +S
Sbjct: 2 ATTLKFELEAHVREDIGKGASRRLRHADKVPAIVYG-------------AGEQAVSLTLD 48
Query: 79 ERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVF 138
K +H++ F S L++ + + +L D + R RI ++ F
Sbjct: 49 HSKTLHALSHEA----FYSHILTLKVGSKNEKVILKD--------IQRHPARPRITHIDF 96
Query: 139 VWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLD 198
+ +L + VP+ F G E+ PG+K+GG + ++ +C + IEVD SNL
Sbjct: 97 LRIRADQKLHMHVPLHFIGEENAPGIKEGGVFSHLMNDIEVICLPADLPEFIEVDASNLA 156
Query: 199 IGDRVFMSDIEV 210
+ + +S++++
Sbjct: 157 LDQSIHLSELKL 168
>gi|26987457|ref|NP_742882.1| 50S ribosomal protein L25 [Pseudomonas putida KT2440]
gi|24982120|gb|AAN66346.1|AE016263_3 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
putida KT2440]
Length = 217
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 84/182 (46%), Gaps = 24/182 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R G S R R IPAVV+ N D +S + IL+ E I
Sbjct: 25 TLNAQARTDLGKGASRRLRHSANIPAVVYG-----GNQDAQSLT---ILAKE------IT 70
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K E S L + G+ +V++ + + P K G I++ FV G +L
Sbjct: 71 KLFENEAAFSHVLELNVD-GAKQNVVVKALQRHPAK-------GFIMHADFVRVVAGQKL 122
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VPV F E P +KKGG + + + ++ C A+ + IEVD++N +IG + +SD
Sbjct: 123 TAKVPVHFIN-EEAP-VKKGGEISHVESEIEVSCEAKDLPEFIEVDLANAEIGTIIHLSD 180
Query: 208 IE 209
++
Sbjct: 181 LK 182
>gi|430004263|emb|CCF20054.1| 50S ribosomal protein L25 [Rhizobium sp.]
Length = 204
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D++ P + + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGFIPAVIYG--------DKQPPISIALSTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDG 144
K + F +T +++ +D K VLP D +++ F+
Sbjct: 52 TKRIHAGGFMTTI----------ATIDVDGKKYQVLPKDYQLDPVRDFTMHVDFLRVSKD 101
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
T + VDVPV F + G+K GG L +R ++++ CPA+ I I VD++ IGD +
Sbjct: 102 TAVTVDVPVHFIN-DQKSGVKIGGVLNIVRHTVEFNCPADAIPDSITVDLTGFKIGDSIH 160
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISA 230
+S + + K + + + I A
Sbjct: 161 ISHVTLPKGVKPVITDRDFTIATIVA 186
>gi|406707811|ref|YP_006758163.1| 50S ribosomal protein L25 [alpha proteobacterium HIMB59]
gi|406653587|gb|AFS48986.1| LSU ribosomal protein L25P [alpha proteobacterium HIMB59]
Length = 213
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%)
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
+++ F DD T + + VP+ F E+ PGLK+GG L +R ++ C A +I K +
Sbjct: 87 IHVDFQRVDDKTRIVISVPIEFVDQETSPGLKQGGVLNVVRREIELSCLANNIPEKFVIS 146
Query: 194 VSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLE 234
+ +IGD + +S + + K L I A K+E
Sbjct: 147 LEGREIGDDIRLSSVTLGEGMKPTILGRDFMLATIQAPKVE 187
>gi|392958407|ref|ZP_10323919.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
macauensis ZFHKF-1]
gi|391875577|gb|EIT84185.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
macauensis ZFHKF-1]
Length = 206
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 85/197 (43%), Gaps = 31/197 (15%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R++G +PAVV+ + Q +S E + +L+ L S
Sbjct: 22 RTEGNVPAVVYGNGI-----------EAQPISVEEVEFIKVLRENGLNGVIS-------- 62
Query: 106 AGSGSSVLLDSGKVLPI---KVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCP 162
L GK +P+ +V D + ++ F+ D E++ ++PV G P
Sbjct: 63 -------LNTEGKTIPVMVQEVQHDRLKNEVRHVDFLVVDLKKEVEAEIPVNIVG--DSP 113
Query: 163 GLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEK 222
G+K+GG L + ++ + I+V + L +GD ++D+ + +++L+S E+
Sbjct: 114 GVKEGGVLTRVLHTVTVKAKPNDLPEHIDVSIEKLGVGDSFLVNDLSKNSAYELISDGEE 173
Query: 223 MPLCKISATKLENPEPA 239
+ L T+L + E A
Sbjct: 174 VILTVTPPTELSSEEEA 190
>gi|357419607|ref|YP_004932599.1| LSU ribosomal protein L25P [Thermovirga lienii DSM 17291]
gi|355397073|gb|AER66502.1| LSU ribosomal protein L25P [Thermovirga lienii DSM 17291]
Length = 216
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 21/200 (10%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE TG VS + R +G IP V + +L + P + + K + S
Sbjct: 12 REGTGKEVSRKIRKEGYIPGVFYGPEL-----EEAIP-----VMVDAKALRPFANSA--- 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+ + Q G + L+ ++ RD TG IL++ F+ G ++ V+VP+
Sbjct: 59 HWETIRIECQFEDGMEAECLMK-------EIQRDPLTGEILHVDFLKLVKGHKVIVNVPI 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
G + C G+K+GG L+ + ++ I + VDVS L I D + + D+++ P
Sbjct: 112 DVVGKDVCVGVKQGGVLEVLMHEIEMEVLPREIPEAVVVDVSKLGIDDVIHIKDLKL-PE 170
Query: 214 WKLLSKNEKMPLCKISATKL 233
++ ++ + +S+ ++
Sbjct: 171 SAVVDQDPNAAVVMVSSARV 190
>gi|408418648|ref|YP_006760062.1| 50S ribosomal protein L25 RplY [Desulfobacula toluolica Tol2]
gi|405105861|emb|CCK79358.1| RplY: 50S ribosomal protein L25 [Desulfobacula toluolica Tol2]
Length = 215
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 23/189 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL- 87
+ A RE +G V+ + R IPA+V+ + +LS + I+
Sbjct: 6 LNAKLREKSGKGVARKLRRNNEIPAIVYG-----------AKKDSMMLSLDTVAFDRIIR 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K+ + F F L++ SG + V+ + D + L++ D ++
Sbjct: 55 KNGSMGLF----FNLKVGGDSGEEKM-----VMLKNMQMDTFGLKYLHIDLHEIDMDNQV 105
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VPV + V G+K+GG L+ IR L LC I+VD+S+LD+GD V + D
Sbjct: 106 SITVPV--EAVGDSKGVKEGGLLQIIRRELDVLCKPTDAPDSIKVDISDLDVGDAVHVED 163
Query: 208 IEVHPSWKL 216
I++ ++
Sbjct: 164 IDLGEGIEI 172
>gi|23009667|ref|ZP_00050632.1| COG1825: Ribosomal protein L25 (general stress protein Ctc)
[Magnetospirillum magnetotacticum MS-1]
Length = 226
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 84/189 (44%), Gaps = 25/189 (13%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQI-LSTERKQ 82
S T++A+ R+ G + R QG+IPAV++ + + P I L R
Sbjct: 2 SATKTLEAVARDRVGKGAARAVRRQGQIPAVIYGGN--------QPPQSIAIDLIRTRTL 53
Query: 83 IHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD 142
I++ F +T F +I G + + +P D +G L++ F+
Sbjct: 54 IYA-------GGFKTTLF--EITVGGKKT------RAIPRDFQLDPVSGVPLHVDFLRVV 98
Query: 143 DGTELKVDVPVVFKGVESCPGL-KKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
G + VDVPV F + PG+ KKGG L +L + I +E+D++ +IGD
Sbjct: 99 SGQTVTVDVPVHFVNEDQAPGIKKKGGTLNVALHTLSLEVAPDQIPDAVEIDLAGREIGD 158
Query: 202 RVFMSDIEV 210
+ SD+ +
Sbjct: 159 VIHASDLRL 167
>gi|386334668|ref|YP_006030839.1| 5S rRNA binding 50S ribosomal subunit protein l25 [Ralstonia
solanacearum Po82]
gi|334197118|gb|AEG70303.1| 5S rRNA binding 50S ribosomal subunit protein l25 [Ralstonia
solanacearum Po82]
Length = 202
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 32/221 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ PA+++ + +++ + ++ LK
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYG-----------GGAEPKMIELDHNALYHALK 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ +++ AG LL ++ P K +L++ F ++
Sbjct: 52 K---EAFHSSILDIEV-AGKSEKALLRDFQLHPFKQ-------LVLHVDFQRVSATEKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I ++ C + IEVD+ L+IG + +SD
Sbjct: 101 VKVPLHFLNQENAPGVKLGHGIVNHILNDVEVSCLPADLPEFIEVDLGTLEIGQTLHISD 160
Query: 208 IEVHPSWKLLSK---------NEKMPLCKISATKLENPEPA 239
+++ +L+ N +P ++SA E +PA
Sbjct: 161 LKLPKGVTILTHGGDENPAVANISVPAGEVSAAAAEGDKPA 201
>gi|354595262|ref|ZP_09013296.1| 50S ribosomal protein L25/general stress protein Ctc
[Commensalibacter intestini A911]
gi|353671304|gb|EHD13009.1| 50S ribosomal protein L25/general stress protein Ctc
[Commensalibacter intestini A911]
Length = 220
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 130 TGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPK 189
T R L++ F G ++V++PV F G + CPG K+ G L ++ S++ C E+I
Sbjct: 88 TDRPLHVDFQRMVAGQHIRVEIPVHFVGEDECPGFKRDGVLNTVMHSIEINCDVENIPEA 147
Query: 190 IEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEK 222
D+S LDI D + S ++ + ++NE+
Sbjct: 148 FIADLSGLDIHDTISWSQLKGTENVTHTNQNEE 180
>gi|365920140|ref|ZP_09444492.1| ribosomal protein L25, Ctc-form [Cardiobacterium valvarum F0432]
gi|364578498|gb|EHM55700.1| ribosomal protein L25, Ctc-form [Cardiobacterium valvarum F0432]
Length = 219
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 94/203 (46%), Gaps = 27/203 (13%)
Query: 23 TSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQ 82
++Y +T+ A R+ G S R R +G +PA+V+ ++ LS Q
Sbjct: 6 SNYAYTLSATVRQDNGKGASRRLRREGLVPAIVYG-------------GEEKPLSIAISQ 52
Query: 83 IHSILKSVELPFFCSTTFPLQIRA-GSGSSVLLDSGKVL--PIKVHRDEETGRILNLVFV 139
S+++ + F S LQ+ G ++ D + L P+ H D + RI+
Sbjct: 53 -DSLVRYGKFDSFYSQIICLQVEGQGDIEVIVRDVQRHLYKPLYQHLDFQ--RIVR---- 105
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
G EL+ V + F ES G+K GG ++ S+ +C ++ IE+D++ +
Sbjct: 106 ----GQELQATVSLHFINEESSVGVKAGGLVEHHLNSVDIVCLPRNLPENIEIDMAEAAL 161
Query: 200 GDRVFMSDIEVHPSWKLLSKNEK 222
GD + + D+++ +L+ ++E+
Sbjct: 162 GDVIHLRDLKLPQGVRLVHEDER 184
>gi|410458777|ref|ZP_11312534.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus
azotoformans LMG 9581]
gi|409931127|gb|EKN68115.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus
azotoformans LMG 9581]
Length = 200
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 76/163 (46%), Gaps = 25/163 (15%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
+S+G+IPAVV+ + + P + +S + + +L+ S
Sbjct: 22 KSKGQIPAVVYGK--------KHEP---KAISVYKGDLLKLLRQNGRYAILSLNV----- 65
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
G V+L +V P+ T I++ F++ D +E+ VPVV KG G+K
Sbjct: 66 GGIDEKVILGDYQVDPL-------TKEIIHADFLYVDLTSEINTKVPVVIKG--EAEGVK 116
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
GG L+ + L + I +I +DV+NL+IGD + ++DI
Sbjct: 117 VGGILQQVLYELNISANVKEIPEEILIDVTNLEIGDTLKIADI 159
>gi|254510687|ref|ZP_05122754.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium KLH11]
gi|221534398|gb|EEE37386.1| ribosomal protein L25, Ctc-form [Rhodobacteraceae bacterium KLH11]
Length = 189
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 42/66 (63%)
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
T++ + +PV F E+ PG+KKGG L +R ++ LC A I KI VD++ L+I D V
Sbjct: 75 TKIALFIPVEFINEEAAPGIKKGGVLTVVRPEVELLCTAGDIPEKITVDLAGLEINDVVT 134
Query: 205 MSDIEV 210
+S +++
Sbjct: 135 ISSVDL 140
>gi|392380061|ref|YP_004987219.1| 50S ribosomal protein L25 [Azospirillum brasilense Sp245]
gi|356882428|emb|CCD03440.1| 50S ribosomal protein L25 [Azospirillum brasilense Sp245]
Length = 203
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 22/182 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R+ G + + R GRIPAV++ +++P ++S E+ +L
Sbjct: 7 LSAEARDRAGKGTARQTRRDGRIPAVIYG--------GKQAPI---MISLEKFTFTRVLN 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F + F + + + +VLP V T L++ F+ T
Sbjct: 56 QAG---FFTHLFDVTVDGATH--------RVLPRDVQFHPVTDVPLHVDFLRVSAETRTT 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V VPV F E PGLK+GG L +R L A +I +I + D+GD + +S +
Sbjct: 105 VQVPVEFVDQEKSPGLKRGGVLNIVRHELDVTVSAGNIPEQITISCEGYDVGDSIHISSV 164
Query: 209 EV 210
++
Sbjct: 165 KL 166
>gi|339485705|ref|YP_004700233.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida S16]
gi|431800778|ref|YP_007227681.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida HB3267]
gi|338836548|gb|AEJ11353.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida S16]
gi|430791543|gb|AGA71738.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida HB3267]
Length = 197
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 82/181 (45%), Gaps = 24/181 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R G S R R IPAVV+ N D +S + IL+ E I
Sbjct: 5 TLNAQARTDLGKGASRRLRHSANIPAVVYG-----GNQDAQSLT---ILAKE------IT 50
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K E S L + G+ +V++ + + P K G I++ FV G +L
Sbjct: 51 KLFENEAAFSHVLELNVD-GAKQNVVVKALQRHPAK-------GFIMHADFVRVVAGQKL 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VPV F E P +KKGG + + ++ C A+ + IEVD++N +IG + +SD
Sbjct: 103 TAKVPVHFIN-EEAP-VKKGGEISHVEAEIEVSCEAKDLPEFIEVDLANAEIGTIIHLSD 160
Query: 208 I 208
+
Sbjct: 161 L 161
>gi|76789542|ref|YP_328628.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis A/HAR-13]
gi|109893354|sp|Q3KKP2.1|RL25_CHLTA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|76168072|gb|AAX51080.1| LSU ribosomal protein L25P [Chlamydia trachomatis A/HAR-13]
Length = 185
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 23/177 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSILKSVE 91
RE V + R QG IPAV+++ + L + D R S+ L ++E
Sbjct: 8 RETDKKSVIKKIRQQGGIPAVLYSGGKSLANIVVDARVFSK-------------FLSTLE 54
Query: 92 LPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDV 151
ST F L +++ D I+ H T +++L F DG ++++++
Sbjct: 55 SGALASTVFTLSYEGREIKALVKD------IQYH--VTTYDVIHLDFEELVDGRDVRLNI 106
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
P+ + C G+K GG L+ + ++ +C + I P +E+DV +L + + +SDI
Sbjct: 107 PIRYINTVDCVGVKLGGSLRQVIRCIRVVCKPKDIVPFLELDVQSLGLSQTLKLSDI 163
>gi|149177254|ref|ZP_01855860.1| probable 50S ribosomal protein L25 [Planctomyces maris DSM 8797]
gi|148843968|gb|EDL58325.1| probable 50S ribosomal protein L25 [Planctomyces maris DSM 8797]
Length = 208
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A RE GS S R GRIPAVV+ + P+ +S + + ++K
Sbjct: 10 ISATKREKLGSIESRHIRRAGRIPAVVYGHG--------QDPAH---VSVDEHDLQDLVK 58
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ E F + + ++L D + D +IL++ + + +
Sbjct: 59 NRE------RVFEIDVDGKVEETMLRD--------LQWDTFGTQILHVDLIRINASERVT 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VPV +G + PG GG L+ +L+ C A I I V ++ L+IGD + +SDI
Sbjct: 105 LEVPVRLRG--TSPGATDGGILEQPLHALELDCLAHSIPDYISVKINALEIGDAIHVSDI 162
Query: 209 EVHPSWKLLSKNEKMPLCKISATKLENPEPA 239
EV P + + ++ + + A E PA
Sbjct: 163 EV-PRGCKIHNDPELVVVHVLAHGAEEAVPA 192
>gi|260574076|ref|ZP_05842081.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacter
sp. SW2]
gi|259023542|gb|EEW26833.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodobacter
sp. SW2]
Length = 203
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 22/197 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG + + R +G +P +V+ D + P + + +++LK ++
Sbjct: 13 RMGTGKGAARQARREGYVPGIVYG--------DGKEPQAINV------KYYTLLKRLKAG 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F T F L+I D +V+ V RD ++ F+ + + + + V
Sbjct: 59 RFLQTLFNLKIEG-------QDDVRVICRGVQRDVVKDLPTHVDFMRLHQASRVNLFIHV 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
F E+ PGLK+GG L +R ++ A I I VD++ +IGD + + D+ V P
Sbjct: 112 TFINHEASPGLKRGGALVVVRPEVELEVTAGDIPDHITVDLAGRNIGDVIHIQDV-VLPE 170
Query: 214 WKLLSKNEKMPLCKISA 230
+ + + ISA
Sbjct: 171 GAAPTIDRNFVIANISA 187
>gi|20808386|ref|NP_623557.1| 50S ribosomal protein L25 [Thermoanaerobacter tengcongensis MB4]
gi|71153671|sp|Q8R8L3.1|RL25_THETN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|20516998|gb|AAM25161.1| Ribosomal protein L25 (general stress protein Ctc)
[Thermoanaerobacter tengcongensis MB4]
Length = 199
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 94/198 (47%), Gaps = 29/198 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++A+ RE TG + R ++QG +PA+++ +D+ + L+ E ++ +L
Sbjct: 5 TLEAVKRE-TGKSAARRLKNQGYVPAIMYGKDMTENIP----------LAVEYTKLQKLL 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + + G+ + L+ ++ D G+I+++ F E+
Sbjct: 54 QK-----YGRNVLLNVVVNGTTHTALIK-------EIQEDTLKGKIIHVDFQRVSMYEEI 101
Query: 148 KVDVPVVFKGVESCPGL--KKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ VP+ F+G+ GL KGG ++ L + I +I VD+S+L+IGD +F+
Sbjct: 102 EATVPLRFEGI----GLIESKGGIVQHQLWELTVESLPDKIPQEIVVDLSHLEIGDTLFV 157
Query: 206 SDIEVHPSWKLLSKNEKM 223
DI V K+L E++
Sbjct: 158 KDIPVPEGVKVLDDPEEI 175
>gi|385809174|ref|YP_005845570.1| 50S ribosomal protein L25P [Ignavibacterium album JCM 16511]
gi|383801222|gb|AFH48302.1| Ribosomal protein L25P [Ignavibacterium album JCM 16511]
Length = 213
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 5/103 (4%)
Query: 111 SVLLDSGKVLP--IK-VHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKG 167
S+ LDSG+ IK V D T +I++ + G +++ +VPV+ KG + G+K+G
Sbjct: 62 SLSLDSGEKYDCVIKDVQFDPVTDKIVHFDLIGLQVGEKIQFEVPVLLKG--TAIGVKEG 119
Query: 168 GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
G ++ L+ C I IEVD++NL IGD + +SD+ V
Sbjct: 120 GVVQHFAHKLEVECLPTDIPEHIEVDITNLKIGDSIHVSDLSV 162
>gi|422319804|ref|ZP_16400877.1| 50S ribosomal protein L25 [Achromobacter xylosoxidans C54]
gi|317405479|gb|EFV85788.1| 50S ribosomal protein L25 [Achromobacter xylosoxidans C54]
Length = 204
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R GS S R R GR+PA+V+ N + + +I+ L+
Sbjct: 5 ATARSVQGSSASRRLRRAGRVPAIVYGGSAAPLNIE-----------LDHNEIYHALRKE 53
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
E F ++ +Q+ VLL S V ++L++ F D L+
Sbjct: 54 E---FHASILQMQLEGAKDEQVLLRS-------VQWHAYKPQVLHVDFQRVDANQALRTK 103
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F E P +K G + + T L+ C + IEV+++++ G + ++DI+
Sbjct: 104 VPLHFVNAEVSPAVKLSGAIISHVATELEITCLPSALPQFIEVNLADILAGASIHLADIK 163
Query: 210 V 210
+
Sbjct: 164 L 164
>gi|91775030|ref|YP_544786.1| 50S ribosomal protein L25P [Methylobacillus flagellatus KT]
gi|122985595|sp|Q1H3J2.1|RL25_METFK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91709017|gb|ABE48945.1| LSU ribosomal protein L25P [Methylobacillus flagellatus KT]
Length = 207
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 82/188 (43%), Gaps = 31/188 (16%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+A RE G+ S R R G +P VV+ D K+ +S E
Sbjct: 4 TIKATKREGKGTSASRRLRRAGNVPGVVYGGD-------------KEAVSLEFNH----- 45
Query: 88 KSVELPF----FCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
K + L F F ++ L++ G V+L ++ P++ I ++ F
Sbjct: 46 KELFLEFRHETFHASILNLEVD-GQKEQVVLRDYQLHPVR-------NTIQHIDFQRVSA 97
Query: 144 GTELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDR 202
++ V VP+ F + PG+K GG + I T C + + IEVD+SNL+ G
Sbjct: 98 SEKVHVKVPLHFINADIAPGVKLAGGIVTHILTEADVSCLPKDLPEFIEVDLSNLEAGHS 157
Query: 203 VFMSDIEV 210
+ +S I++
Sbjct: 158 IHLSQIKL 165
>gi|325187175|emb|CCA21716.1| 50S ribosomal protein L25 putative [Albugo laibachii Nc14]
gi|325187320|emb|CCA21859.1| 50S ribosomal protein L25 putative [Albugo laibachii Nc14]
Length = 258
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 80/175 (45%), Gaps = 17/175 (9%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R GSR + + R +G +P +++ + + +T K ++S E+K + + +
Sbjct: 44 RTQDGSRAARKLRKKGYLPGLLYGEGMNGDDT-------KVLVSLEKKLFDRLHRKLWTS 96
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+ F +Q++ ++ + P+ T L + F+ +G KV +P+
Sbjct: 97 I-DNQVFKVQVKDQPPILAIMRDVQFHPV-------TDIPLTVNFIRYKNGR--KVSIPI 146
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ E PG+K+GGY+ I ++ E + +E+DV+ LD+ + F+ I
Sbjct: 147 TYINEEGSPGIKRGGYINHIYHEVECYINTEQVPKTLEIDVNGLDVDSKFFLETI 201
>gi|431932402|ref|YP_007245448.1| 50S ribosomal protein L25 [Thioflavicoccus mobilis 8321]
gi|431830705|gb|AGA91818.1| ribosomal protein L25, Ctc-form [Thioflavicoccus mobilis 8321]
Length = 206
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 78/176 (44%), Gaps = 22/176 (12%)
Query: 33 PRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVEL 92
PR TG S R R G++PA+V+ + P + +E +L+ +
Sbjct: 11 PRHDTGKGASRRLRRTGQVPAIVYG--------GHQEPEMISVSHSE------LLRHLNN 56
Query: 93 PFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVP 152
F S LQ+ + VL D + R IL++ F G ++++ VP
Sbjct: 57 EAFYSHVLDLQVGERNTKVVLKD--------MQRHPAKPFILHVDFQRVSAGEKIRMVVP 108
Query: 153 VVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ F+ + G+K GG + T ++ C + + I +D++ +DIGD + +S+I
Sbjct: 109 LHFENEQQSKGVKLGGRVSHSVTEVEISCLPKDLPEFIAIDMTEMDIGDVIHLSEI 164
>gi|126735034|ref|ZP_01750780.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter
sp. CCS2]
gi|126715589|gb|EBA12454.1| 50S ribosomal protein L25/general stress protein Ctc [Roseobacter
sp. CCS2]
Length = 221
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+PV F E+CPG+KKGG L +R ++ A I IE+D++ ++IGD + +SD+
Sbjct: 109 IPVEFLNAETCPGVKKGGVLTVVRNEVELNVLAGDIPEHIEIDLTEVEIGDTISISDV 166
>gi|339319516|ref|YP_004679211.1| 50S ribosomal protein L25 [Candidatus Midichloria mitochondrii
IricVA]
gi|338225641|gb|AEI88525.1| ribosomal protein L25 [Candidatus Midichloria mitochondrii IricVA]
Length = 202
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
TE+KV V V + CPG+KKGG + + ++ + C I I+VDV+NL++G +
Sbjct: 100 TEIKVAVHVRIINDDKCPGIKKGGVMNVAQRTINFYCHPSSIPSSIDVDVANLEVGQNLH 159
Query: 205 MSDIEV 210
++D+++
Sbjct: 160 INDLQL 165
>gi|258544625|ref|ZP_05704859.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Cardiobacterium hominis ATCC 15826]
gi|258520133|gb|EEV88992.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Cardiobacterium hominis ATCC 15826]
Length = 211
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 27/203 (13%)
Query: 23 TSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQ 82
+ Y +T+ AI R+ +G S R R +G +PA+V+ L KQ
Sbjct: 2 SEYAYTLSAIVRQDSGKGASRRLRREGLVPAIVYG-------------GEGAALPVAVKQ 48
Query: 83 IHSILKSVELPFFCSTTFPLQIRA-GSGSSVLLDSGKVL--PIKVHRDEETGRILNLVFV 139
++K F S L++ G ++ D + L P+ H D F
Sbjct: 49 -DDLVKFGRFDSFYSQIICLKVEGQGDVEVIVRDVQRHLYKPLYQHMD----------FQ 97
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
G EL+ V + F ++ G+K GG ++ S + +C ++ IEVD++N+ +
Sbjct: 98 RVVRGQELQATVSLHFTNEDTSVGVKAGGIVEHHLNSAEIVCLPRNLPEYIEVDMANVAL 157
Query: 200 GDRVFMSDIEVHPSWKLLSKNEK 222
GD + + D+++ +LL +++
Sbjct: 158 GDVIHLRDLKLPQGVRLLHDDDR 180
>gi|15644375|ref|NP_229427.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga
maritima MSB8]
gi|418045687|ref|ZP_12683782.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga
maritima MSB8]
gi|7674238|sp|Q9X1W2.1|RL25_THEMA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|4982200|gb|AAD36694.1|AE001806_4 general stress protein Ctc [Thermotoga maritima MSB8]
gi|351676572|gb|EHA59725.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga
maritima MSB8]
Length = 215
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 99/199 (49%), Gaps = 27/199 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQI-LSTERKQIHSI 86
+++A RE G R + R R +G +PAVV+ P+ + I + +R + I
Sbjct: 3 SLEARVREVKGKREARRLRRRGEVPAVVYG------------PATEPIPVKIKRSVLEKI 50
Query: 87 LKSVELPFFCSTTFPLQ--IRAGSGSSVLLDSGKVLPIK-VHRDEETGRILNLVFVWADD 143
++ S P+Q I+ G++V + K + +K V RD+ + +++L F
Sbjct: 51 FHTI------SEATPIQLIIKDDQGNTV---AEKTVFLKMVQRDKVSETVVHLDFYEPTK 101
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G ++++VP K V G++KGG+L+ + + + +IEVDVS+LD+GD +
Sbjct: 102 GHRMRINVP--LKVVGKPVGVEKGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVI 159
Query: 204 FMSDIEVHPSWKLLSKNEK 222
D+++ K L + E+
Sbjct: 160 HARDLKLPEGVKCLLEEEE 178
>gi|73540047|ref|YP_294567.1| 50S ribosomal protein L25 [Ralstonia eutropha JMP134]
gi|109893384|sp|Q476G0.1|RL25_RALEJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|72117460|gb|AAZ59723.1| LSU ribosomal protein L25P [Ralstonia eutropha JMP134]
Length = 203
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 86/197 (43%), Gaps = 23/197 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ P +++ + K I H++ K
Sbjct: 3 VVAFERSVQGTGASRRLRNSGKTPGIIYGG----------AADPKMIELDHNALWHALKK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ L++ AG LL + ++ P K +L++ F ++
Sbjct: 53 EA----FHSSILDLEV-AGKSEKALLRAFQMHPFK-------PLVLHVDFQRVSANDKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I L+ C + IEVDV N+++G + ++D
Sbjct: 101 VKVPLHFMNQETAPGVKLGHGLVNHIVNDLEVSCLPADLPEFIEVDVGNMEVGQTLHLTD 160
Query: 208 IEVHPSWKLLSKNEKMP 224
+++ +++ ++ P
Sbjct: 161 LKLPKGVTVVTHGDENP 177
>gi|332878587|ref|ZP_08446307.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332683488|gb|EGJ56365.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 198
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 97/205 (47%), Gaps = 29/205 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+ RE G S R+ G++P V++ D +L ++ +
Sbjct: 5 TIKGSQRESVGKAASKALRNAGQVPCVLYGGD--------------DVLHFSAPEL-AFA 49
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
V P + T +++ S +++L D + D T +I+++ F + E+
Sbjct: 50 GIVYTPNVYTAT--IEVNGKSYTAILQD--------IQFDPVTDKIIHIDFYQLNKNKEI 99
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
++VP+ +G + PG+ GG L+ + LK +++ I VD+S L++G+R++++
Sbjct: 100 TIEVPIQIQG--TSPGVMAGGTLRVVNRKLKIKALPDNLPDFIPVDISALEMGNRLYITK 157
Query: 208 IEVHPSWKLLSKNEKMPLCKISATK 232
+ ++K++ + + +C+I ++
Sbjct: 158 LP-QENYKIMHPDNTV-VCQIRVSR 180
>gi|336171899|ref|YP_004579037.1| 50S ribosomal protein L25 [Lacinutrix sp. 5H-3-7-4]
gi|334726471|gb|AEH00609.1| 50S ribosomal protein L25 [Lacinutrix sp. 5H-3-7-4]
Length = 210
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/188 (22%), Positives = 83/188 (44%), Gaps = 38/188 (20%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI RE G + + R+ G++P V++ D K +H
Sbjct: 5 TINGSQRESVGKKSTKALRNAGQVPCVLYGGD---------------------KAVH--F 41
Query: 88 KSVELPFF------CSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWA 141
+ EL F + T +++ G + +L + P+ T RIL++ F
Sbjct: 42 SAAELAFSKLVYTPNAHTVVIELEGGDTYNAILQDIQFHPV-------TDRILHIDFYQV 94
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
+ E+ +D+PV + G + G++ GG L+ + SL+ ++ I+ D+ NL IG+
Sbjct: 95 FEDKEITMDIPVRYIG--NPRGVRNGGVLRKNKRSLRVKALPGNLPDYIDADIENLKIGN 152
Query: 202 RVFMSDIE 209
+++++ +E
Sbjct: 153 KLYITKLE 160
>gi|405754293|ref|YP_006677757.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2540]
gi|404223493|emb|CBY74855.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Listeria
monocytogenes SLCC2540]
Length = 207
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 37/220 (16%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++ RE T R RS+G++P +++ S +S + ++ +
Sbjct: 4 TLEVQKRETTQHSEVTRLRSEGKVPGIIYGYK-----------SENVPVSVDSLELIKAV 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDG 144
+ S T G +VLL +V P+K VH D + D
Sbjct: 53 RDNGRNAVFSVTV-----DGKKLNVLLHEYQVDPLKDVLVHVD----------LLAVDMN 97
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
E++ DV VV G PG+K GG L+ I +K E + IE+D+S+L+IGD +
Sbjct: 98 EEVETDVRVVLVG--DAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLT 155
Query: 205 MSDIEVHPSWKLLSKNEK------MPLCKISATKLENPEP 238
+D+ + + + + E+ P + T E PEP
Sbjct: 156 TNDLPENKDYVVQAGEEETVVTVSAPRAEEEPTTTEAPEP 195
>gi|394990503|ref|ZP_10383335.1| hypothetical protein SCD_02931 [Sulfuricella denitrificans skB26]
gi|393790768|dbj|GAB72974.1| hypothetical protein SCD_02931 [Sulfuricella denitrificans skB26]
Length = 208
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 90/204 (44%), Gaps = 25/204 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A R G+ S R R GRIPAVV+ + + + K++ LK
Sbjct: 5 ISATARTLQGTGASRRLRRTGRIPAVVYGGE-----------KDAAAIELDHKEVFYKLK 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F +T L + G VLL ++ P + ++++ F + ++
Sbjct: 54 N---EAFHATILSLNLD-GKAEQVLLRDYQMHPFR-------PVVMHVDFQRVNPKEKIH 102
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VP+ F + PG+K G + I T + C + + IEVD++NL G + +S+
Sbjct: 103 IKVPLHFANADIAPGVKLSAGIVSHIITEVDVACLPKDLPEFIEVDLANLAAGHSIHLSE 162
Query: 208 IEVHPSWKL--LSKNEKMPLCKIS 229
+++ +L L+K E + + I+
Sbjct: 163 LKLGKGIELIPLTKGEDLAVATIT 186
>gi|124483376|emb|CAM32561.1| 50S ribosomal subunit protein L25 [Herbaspirillum seropedicae]
Length = 202
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A PR+ G+ S R R G+ P +V+ N ++ + ++ LK
Sbjct: 5 AFPRKEQGTGASRRLRRAGQTPGIVYGGTAAPLN-----------IAVDHNALYHALKK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F S+ L+I G VLL +VH ++ +L++ F D +L
Sbjct: 53 --ETFHSSILDLEIE-GKVEQVLLRD-----FQVHAYKQL--VLHVDFQRVDASQKLHTK 102
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F E P +K GG + + L C +++ IEVD++ LD+G + ++D++
Sbjct: 103 VPLHFVNAEVSPAVKLHGGIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLK 162
Query: 210 V 210
+
Sbjct: 163 L 163
>gi|451936226|ref|YP_007460080.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
gi|451777149|gb|AGF48124.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium oncopeltii TCC290E]
Length = 205
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 22/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A+ R+ G+ S R R G +PA+++ S + + +I+ L+
Sbjct: 3 INALLRDMHGTSASRRLRHVGGVPAIIYG-----------GSSLPMTIELDHNEIYHALR 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F S+ ++I V+L S + P K ++L++ F + E+
Sbjct: 52 KEK---FHSSILNIKINGKDAEQVILRSVQWHPYK-------QQVLHIDFQRVESNQEIS 101
Query: 149 VDVPVVFKGVESCPGLKKGG-YLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VP+ F + P +K GG ++ + T L C + I VD+S + +GD V +SD
Sbjct: 102 TRVPLHFLNEDISPAVKIGGAIIRHVITELDITCMPALLPQFINVDLSGVSLGDSVHLSD 161
Query: 208 IEV 210
+++
Sbjct: 162 VKL 164
>gi|120555278|ref|YP_959629.1| 50S ribosomal protein L25/general stress protein Ctc [Marinobacter
aquaeolei VT8]
gi|387813299|ref|YP_005428781.1| 50S ribosomal protein L25, general stress protein CTC [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|166223694|sp|A1U373.1|RL25_MARAV RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120325127|gb|ABM19442.1| LSU ribosomal protein L25P [Marinobacter aquaeolei VT8]
gi|381338311|emb|CCG94358.1| 50S ribosomal protein L25, general stress protein CTC [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 212
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 95/213 (44%), Gaps = 32/213 (15%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
I+A PR+ G S R R + R IPA+++ + + I E K
Sbjct: 6 VIEAFPRDDQGKGASRRLRREERKIPAIIYGGG--------KDATPVAIWHNELK----- 52
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDG 144
K++E F S + I+ S +L D + PI H D F+ D
Sbjct: 53 -KAIENEAFFSHILTVDIQGKKESVILKDLQRHPYKPILTHAD----------FLRVDKD 101
Query: 145 TELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
E+ V+VP+ F ++ P +K +GG + T ++ +C +++ IEVD++ +++ V
Sbjct: 102 HEIHVNVPLHFINEDTAPAVKLQGGIVSHTMTEVEVICLPQNLPEFIEVDLNEVEMDQVV 161
Query: 204 FMSDIEVHPSWKLLS----KNEKMPLCKISATK 232
+SD+++ K+ + ++ +P+ I K
Sbjct: 162 HLSDLKLPKGVKVAALQQGEDHDLPVASIHKPK 194
>gi|254470593|ref|ZP_05083997.1| ribosomal protein L25, Ctc-form [Pseudovibrio sp. JE062]
gi|374332778|ref|YP_005082962.1| 50S ribosomal protein L25 [Pseudovibrio sp. FO-BEG1]
gi|211960904|gb|EEA96100.1| ribosomal protein L25, Ctc-form [Pseudovibrio sp. JE062]
gi|359345566|gb|AEV38940.1| 50S ribosomal protein L25 [Pseudovibrio sp. FO-BEG1]
Length = 204
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 107 GSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKK 166
G +SV+ ++ P+K ++++ F+ L V++PV F E+ PGLK+
Sbjct: 70 GEKTSVIAKDFQLHPVK-------DTLMHVDFLRVSADATLTVEIPVKFLNEETSPGLKR 122
Query: 167 GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
GG L +R +++ PA I IEVD++ D+G +S +++
Sbjct: 123 GGVLNVVRHTVEMTVPATAIPEAIEVDLAEADLGSSQHISAVKL 166
>gi|374621845|ref|ZP_09694374.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Ectothiorhodospira sp. PHS-1]
gi|373940975|gb|EHQ51520.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Ectothiorhodospira sp. PHS-1]
Length = 209
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 80/189 (42%), Gaps = 35/189 (18%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQD------LLDKNTDRRSPSRKQILSTERKQ 82
+QA PR G S R R G++PA+V+ D LD NT
Sbjct: 7 LQAEPRADQGKGASRRLRRAGKLPAIVYGGDKEPVAITLDHNT----------------- 49
Query: 83 IHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD 142
+ S+ F S L++ S +L D + R +L++
Sbjct: 50 ---VWLSLAHEAFYSHILTLKVDGKSERVILRD--------LQRHPVKQMVLHMDLQRVT 98
Query: 143 DGTELKVDVPVVFKGVESCPGLKKGGYLKSIRT-SLKYLCPAEHISPKIEVDVSNLDIGD 201
D +KV VP+ F + C G+K GG + S + ++ C + + IEVDV+ L++GD
Sbjct: 99 DDQAIKVHVPLHFINEDICVGVKTGGGMISHQAMEVEVECLPKDLPEFIEVDVAALNVGD 158
Query: 202 RVFMSDIEV 210
+ +S I++
Sbjct: 159 SLHLSQIQL 167
>gi|71275258|ref|ZP_00651545.1| Ribosomal protein L25 [Xylella fastidiosa Dixon]
gi|170731256|ref|YP_001776689.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella
fastidiosa M12]
gi|226694605|sp|B0U5Y7.1|RL25_XYLFM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71164067|gb|EAO13782.1| Ribosomal protein L25 [Xylella fastidiosa Dixon]
gi|71728035|gb|EAO30246.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1]
gi|167966049|gb|ACA13059.1| 50S ribosomal protein L25 [Xylella fastidiosa M12]
Length = 207
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I+A R+ G S R R G IPA+++ D + P Q L+ E+ I
Sbjct: 4 HQIKAQRRKDEGKGASRRLRHAGMIPAIIYGGD--------QRPVSIQ-LNHEQ-----I 49
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ + +F S+ L + G G VLL + P + ++++ F +
Sbjct: 50 WLAQQNEWFYSSILDLNVDGGGGEKVLLRDLQRHPYR-------QLVMHVDFQRVSSDAK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L V VP+ F + P K GG + + ++ C + + IEVD+S L++G + +
Sbjct: 103 LSVAVPLHFINQATSPAGKAGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHL 162
Query: 206 SDIEVHPSWKL---LSKNEKMPLCKISATKLENPEPA 239
SDI +L L K M + +E+ PA
Sbjct: 163 SDITFPIGVELSTRLDKEHDMAVVIAKHAVIEDDAPA 199
>gi|300024018|ref|YP_003756629.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Hyphomicrobium denitrificans ATCC 51888]
gi|299525839|gb|ADJ24308.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Hyphomicrobium denitrificans ATCC 51888]
Length = 242
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 89/208 (42%), Gaps = 30/208 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++A R G + + R G +PAV++ ++ +P T + + +
Sbjct: 6 TLKATARPRAGKGAARQARRDGNVPAVIYG--------NQETPE------TINLEYNELW 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRD-EETGRILNLVFVWADD 143
K V F ST L + G+ VL +V PI+ +H D + G+ D
Sbjct: 52 KQVLRGHFTSTAIELDVE-GTKHIVLARDVQVDPIRDTPLHVDFQRVGK----------D 100
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G ++V +P+ F PGLK+GG L +R ++ P + I E+++ L+IG +
Sbjct: 101 GV-IRVSIPMHFVNETLSPGLKRGGVLNIVRHDVEVFAPYDKIPRFFEINLEGLEIGRSI 159
Query: 204 FMSDIEVHPSWKLLSKNEKMPLCKISAT 231
+S + + + KN + I+
Sbjct: 160 HISAVNMPEGVTPVIKNRDFTIATIAGA 187
>gi|323701607|ref|ZP_08113279.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum nigrificans DSM 574]
gi|323533380|gb|EGB23247.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum nigrificans DSM 574]
Length = 210
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 98/212 (46%), Gaps = 29/212 (13%)
Query: 29 IQAIPRECTGSRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A PRE +R S R R QG IP V++ + + +S + K++ IL
Sbjct: 6 LNANPREER-TRSSLRQIREQGGIPGVLYGKQ-----------TGSMAISVDAKELKKIL 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
SV +T + + G+ +V++ S ++ +HR I ++ F + T++
Sbjct: 54 GSVN---GRNTLINMNVN-GAKRTVIVKSLQM--DHLHRG-----IQHVDFQEVSENTKI 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VPV G + G+ GG ++ S++ C I IEVD+SNL+IGD + +SD
Sbjct: 103 RTVVPVHLVG--TPIGVTHGGIIQHDLRSVEVECLPSQIPNHIEVDISNLEIGDALSVSD 160
Query: 208 IEVHPSWKLLSKNEKMPLCKISATKLENPEPA 239
+ + P K+L + + PEPA
Sbjct: 161 LNLPPGVKVLDHPHT---TVVGVANAKAPEPA 189
>gi|222099805|ref|YP_002534373.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga
neapolitana DSM 4359]
gi|254801063|sp|B9K7S4.1|RL25_THENN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|221572195|gb|ACM23007.1| 50S ribosomal protein L25 [Thermotoga neapolitana DSM 4359]
Length = 215
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 86/191 (45%), Gaps = 23/191 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVF--AQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVE 91
R G R + R R +G +PAVV+ A D + R S K H+I
Sbjct: 9 RTPKGKREAKRLRRRGEVPAVVYGPATDPIPVKIKR---------SLLEKVFHTI----- 54
Query: 92 LPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDV 151
+ T P+++ + V + RD+ + I+++ F G ++++V
Sbjct: 55 -----TETTPIRLVIKDDEERTVSEKTVFLKMIQRDKVSEAIVHVDFYEPVKGHRMRINV 109
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
P K V G++KGG+L+ + + + +IEVDVS+LD+GD + D+++
Sbjct: 110 P--LKVVGKPVGVEKGGFLEVYHEEIPVETDPDRVPQEIEVDVSSLDLGDVIHARDLKLP 167
Query: 212 PSWKLLSKNEK 222
K L ++E+
Sbjct: 168 EGVKCLLEDEE 178
>gi|340028517|ref|ZP_08664580.1| 50S ribosomal protein L25/general stress protein Ctc [Paracoccus
sp. TRP]
Length = 207
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG + + R +G++P +V+ D + P Q ++ E + +L +
Sbjct: 13 RTGTGKGAARQARREGKVPGIVYG--------DGKEP---QPIALE---FNYLLTKLRAG 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ST + L++ V+ V RD ++ F+ T + + + V
Sbjct: 59 RFMSTLWNLKVEGQEDVRVVCRG-------VQRDVVKDLPTHIDFMRVHRNTRVNLFINV 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
F+ E PGLK+GG L +R ++ + A I +I VD++ +IG+ + ++D+++
Sbjct: 112 HFENHEQAPGLKRGGTLVVVRPEVELMVTASDIPEQITVDLTGREIGESIHINDVQL 168
>gi|124268412|ref|YP_001022416.1| 50S ribosomal protein L25/general stress protein Ctc [Methylibium
petroleiphilum PM1]
gi|166223695|sp|A2SKU2.1|RL25_METPP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|124261187|gb|ABM96181.1| LSU ribosomal protein L25P [Methylibium petroleiphilum PM1]
Length = 214
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 89/198 (44%), Gaps = 26/198 (13%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVF-AQDLLDKNTDRRSPSRKQILSTERKQIHSILKS 89
A PRE G+ S R R G++P +V+ A + L D + H++ K
Sbjct: 5 AYPRELQGTGASRRLRISGKVPGIVYGAGEPLKIELDHNA------------LFHALKKE 52
Query: 90 VELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKV 149
F ++ ++ S +L D +++H ++L++ F D T +
Sbjct: 53 A----FHASLLDMEFNGKSQQVLLRD------VQMHAFRP--QVLHVDFQRVDATTRVTK 100
Query: 150 DVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VP+ F E+ PG+K G + + T L+ C A + + VD+ L G + ++D+
Sbjct: 101 KVPLHFVNEENAPGVKLDKGLISHVVTELEVECLASQLPEYLTVDLGELAKGQSLHVNDL 160
Query: 209 EVHPSWKLLSKNEKMPLC 226
++ PS K++ + +K P+
Sbjct: 161 KLPPSVKVVLRGKKNPVI 178
>gi|325983634|ref|YP_004296036.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosomonas
sp. AL212]
gi|325533153|gb|ADZ27874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosomonas
sp. AL212]
Length = 206
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 25/203 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A R G S R R G++PAV++ D Q + + +
Sbjct: 5 ISADKRTLQGKGASRRLRGSGKVPAVIYGGD--------------QAAQSIEMDHNDLFH 50
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++L F ++ L + AG VLL ++ P K ++L++ F D ++
Sbjct: 51 KLKLEAFHASILTLSV-AGKKEPVLLRDVQMHPFK-------KQVLHVDFQRVDKNKKIH 102
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VP+ F E PG+K GG + I T + C + I VD++ L G + +SD
Sbjct: 103 MKVPLHFINAEISPGVKTSGGIVTHILTEVDITCLPGDLPEFISVDLAELTAGHTLHLSD 162
Query: 208 IEVHPSWK--LLSKNEKMPLCKI 228
+ + + L+K + +P+ I
Sbjct: 163 LVLPKDVETVALAKGDNLPVATI 185
>gi|254428105|ref|ZP_05041812.1| ribosomal protein L25, Ctc-form [Alcanivorax sp. DG881]
gi|196194274|gb|EDX89233.1| ribosomal protein L25, Ctc-form [Alcanivorax sp. DG881]
Length = 215
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 87/184 (47%), Gaps = 24/184 (13%)
Query: 29 IQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A R TG S R R Q R+P +++ + + Q++S E +++
Sbjct: 7 LNAESRSDTGKGASRRLRRLQERVPGILYGGE-----------AEPQMISVELRELK--- 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K++E F S L++ S +VL D + R G L++ + D ++
Sbjct: 53 KALENEAFYSHILTLKLDGASVQAVLRD--------MQRHPAKGHPLHVDLLRVDKTHKI 104
Query: 148 KVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++VP+ F ES G+KK GG ++ ++ C +H+ IEVD++N ++ + +S
Sbjct: 105 TMNVPLHFINEESSIGVKKQGGEIQHNYAEVEVSCLPQHLPEFIEVDMANAELETVIHLS 164
Query: 207 DIEV 210
D+++
Sbjct: 165 DLKL 168
>gi|402494969|ref|ZP_10841704.1| 50S ribosomal protein L25/general stress protein Ctc [Aquimarina
agarilytica ZC1]
Length = 200
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 26/182 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A RE G + + R+ G +P VV+ D + T + K + + + +H+++
Sbjct: 5 TINASQRESLGKKATKALRNAGNVPCVVYGGDTVTHFTAHENMFSKLVYTPD---VHTVV 61
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + G+ + +L + P T +IL++ FV D +
Sbjct: 62 --------------IALDNGTNINAILQDIQFHP-------TTDKILHIDFVQIFDDKAI 100
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+++PV G PG+ GG LK LK A ++ +I+ D+S L IG++++++
Sbjct: 101 TMEIPVRTTG--KSPGVANGGNLKFNARRLKVKGLAANLPDEIKADISELKIGNKLYVTQ 158
Query: 208 IE 209
++
Sbjct: 159 LD 160
>gi|389580921|ref|ZP_10170948.1| ribosomal protein L25, Ctc-form [Desulfobacter postgatei 2ac9]
gi|389402556|gb|EIM64778.1| ribosomal protein L25, Ctc-form [Desulfobacter postgatei 2ac9]
Length = 207
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 86/198 (43%), Gaps = 51/198 (25%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE TG + + R+ IP +V+ +I + S+++
Sbjct: 11 RESTGKGAAKKLRADNAIPGIVYGA-----------------------KIEPVKVSIDV- 46
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD---------DG 144
TF IR + + D +KV + ETGR++ L + D D
Sbjct: 47 ----NTFDKVIRENGTTGLFFD------LKVEGEGETGRMVMLKEIQMDPFGLRYQHIDF 96
Query: 145 TELKVD------VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLD 198
E+ +D VPV +G + G+K+GG ++ IR L+ +C + I++D+S L+
Sbjct: 97 HEIDMDATVSIVVPVEVQG--TSAGVKEGGMVQIIRRDLEVICKPKDTPESIKLDISELE 154
Query: 199 IGDRVFMSDIEVHPSWKL 216
IGD + ++DI++ ++
Sbjct: 155 IGDSIHVADIDLGAEIEI 172
>gi|409407694|ref|ZP_11256145.1| large subunit ribosomal protein L25 [Herbaspirillum sp. GW103]
gi|386433445|gb|EIJ46271.1| large subunit ribosomal protein L25 [Herbaspirillum sp. GW103]
Length = 202
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A PR G+ S R R G+ P +V+ N ++ + ++ LK
Sbjct: 5 AFPRNEQGTGASRRLRRAGQTPGIVYGGTAAPTN-----------IAVDHNALYHALKK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F S+ L+I G VLL +V K +L++ F D +L
Sbjct: 53 --ETFHSSILDLEID-GKVEQVLLRDFQVHAFK-------QLVLHVDFQRVDASQKLHTK 102
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F E P +K GG + + L C +++ IEVD++ LD+G + ++D++
Sbjct: 103 VPLHFVNAEVSPAVKLHGGIISHVAAELDVTCLPKNLPEFIEVDLAKLDVGQSIHLADLK 162
Query: 210 V 210
+
Sbjct: 163 L 163
>gi|404493646|ref|YP_006717752.1| 50S ribosomal protein L25/general stress protein Ctc [Pelobacter
carbinolicus DSM 2380]
gi|109893375|sp|Q3A313.1|RL25_PELCD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|77545682|gb|ABA89244.1| ribosomal protein L25 [Pelobacter carbinolicus DSM 2380]
Length = 208
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 28/180 (15%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G + R +G IPAV++ K + S L E KQ+ +I+ S E
Sbjct: 11 REGLGKGTARSLRREGLIPAVMYG-----KGVENCS------LVVEPKQLAAIIGS-EAG 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVD 150
T + A G V+L +V PI+ +H D F D + V
Sbjct: 59 LNSLITLKGE-GAFDGKVVILKDMQVDPIRQTPLHVD----------FQAIDLNAKTHVL 107
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
VP+V G G K+GG L+ IR ++ +C +I IEVDV+ L+IGD + + D+++
Sbjct: 108 VPLVVVG--KSEGEKQGGNLQIIRHEVELVCLPANIPANIEVDVTALNIGDALHVQDVQL 165
>gi|389693984|ref|ZP_10182078.1| ribosomal protein L25, Ctc-form [Microvirga sp. WSM3557]
gi|388587370|gb|EIM27663.1| ribosomal protein L25, Ctc-form [Microvirga sp. WSM3557]
Length = 205
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 88/202 (43%), Gaps = 23/202 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I+A+ R+ +G + R QG++PAV++ + KQ++
Sbjct: 7 IKAVARDRSGKGAARAVRRQGQVPAVIYGAGQAAQAIALDFNQTKQLIFAGH-------- 58
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F +T F + + +G +V + +P D +++ F+ G +K
Sbjct: 59 ------FLTTIFEIDV---NGQTV-----RAIPRDYQLDPVRDFPIHVDFLRVSAGQTIK 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V VPV G E PG+K+GG L+ + +++ + I IE V LDIG V + DI
Sbjct: 105 VVVPVHVVGQEKSPGVKRGGTLQVVEHTVELAVSPDAIPDYIEASVEGLDIGSSVHLEDI 164
Query: 209 EVHPSWKLLSKNEKMPLCKISA 230
++ P+ + E + L + A
Sbjct: 165 KL-PNGAKATSTENLTLVTVVA 185
>gi|296284047|ref|ZP_06862045.1| 50S ribosomal protein L25/general stress protein Ctc
[Citromicrobium bathyomarinum JL354]
Length = 226
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G S R +GR+PAV++ + P+ + E ++
Sbjct: 6 TLPAETRDRAGKGASRALRREGRVPAVIYGG--------KEEPTPIHVEERE------LV 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ ++ F ++ L++ G V + LP V T R ++ F+ G ++
Sbjct: 52 RQLDTGHFMNSIIELEV---GGKKV-----RTLPKDVALHPVTDRPEHVDFLRLTKGAKV 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VPVVF E PGLKKGG L +R L+ +C A+ I +I + V ++GD + +S+
Sbjct: 104 DVSVPVVFVDEEESPGLKKGGVLNVVRHELELVCEADKIPGEITISVKGKEVGDSIHISE 163
Query: 208 IEV 210
+++
Sbjct: 164 VDL 166
>gi|262197679|ref|YP_003268888.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haliangium
ochraceum DSM 14365]
gi|262081026|gb|ACY16995.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Haliangium
ochraceum DSM 14365]
Length = 206
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 87/193 (45%), Gaps = 21/193 (10%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDK-NTDRRSPSRKQILSTERKQIHSILKSVEL 92
R TG ++ + R+QGR+P + + + D + + L ++Q I +VE
Sbjct: 11 RNITGKSMARKLRTQGRLPGICYGSGVEQPIMLDFDGRAFRASLDPTKRQNTVIDLTVED 70
Query: 93 PFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVP 152
+FP V++ ++ PI+ + ++ F+ D +E+ +VP
Sbjct: 71 DAGAGQSFP----------VMVKDYQIDPIRRE-------LTHVDFITVDTSSEVTAEVP 113
Query: 153 VVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
+ F G G++ GG L +R L+ C I KI +D+S+LD D + + D+++ P
Sbjct: 114 LEFTG--KSKGVELGGTLHVVRHELEVRCKPADIPSKIVIDISDLDTNDVIHVRDLKL-P 170
Query: 213 SWKLLSKNEKMPL 225
S E++ +
Sbjct: 171 EGVFASTAEQLTI 183
>gi|116871593|ref|YP_848374.1| 50S ribosomal protein L25 [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116740471|emb|CAK19591.1| ribosomal 50S general stress protein L25/Ctc [Listeria welshimeri
serovar 6b str. SLCC5334]
Length = 207
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 37/220 (16%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++ RE T + RS+G++P +++ S +S + ++ +
Sbjct: 4 TLEVQKRETTQHSEVTKLRSEGKVPGIIYGYK-----------SENVPVSVDSLELIKAV 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDG 144
+ S T G +VLL +V P+K VH D + D
Sbjct: 53 RDNGRNAVFSVTV-----DGKKLNVLLHEYQVDPLKDVLVHVD----------LLAVDMN 97
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
E++ DV VV G PG+K GG L+ I +K E + IE+D+S+L+IGD +
Sbjct: 98 EEVETDVRVVLVG--DAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLT 155
Query: 205 MSDIEVHPSWKLLSKNEK------MPLCKISATKLENPEP 238
+D+ + + + ++ E+ P + T E PEP
Sbjct: 156 TNDLPNNKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEP 195
>gi|104780084|ref|YP_606582.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
entomophila L48]
gi|166223705|sp|Q1IEY7.1|RL25_PSEE4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|95109071|emb|CAK13767.1| 50S ribosomal subunit protein L25 (General stress protein CTC)
[Pseudomonas entomophila L48]
Length = 198
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 24/181 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G S R R IPAVV+ D Q L+ K+I + +
Sbjct: 6 LNAQARTDLGKGASRRLRHSANIPAVVYGGD-----------KEAQSLTIVAKEIAKLFE 54
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ E F S L + G+ +V++ + + P K G I++ FV G +L
Sbjct: 55 N-EAAF--SHVIELNVD-GAKQNVVVKAMQRHPAK-------GFIMHADFVRVVAGQKLT 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV F G E P +KKGG + + + ++ C A+ + IEVD+S ++G + +SD+
Sbjct: 104 AKVPVHFVG-EEAP-IKKGGEISHVVSEIEVSCEAKDLPEFIEVDLSKAEVGTIIHLSDL 161
Query: 209 E 209
+
Sbjct: 162 K 162
>gi|350560649|ref|ZP_08929489.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782917|gb|EGZ37200.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 212
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 39/190 (20%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDL------LDKNTDRRSPSRKQILSTERK 81
I+A PR GS S R R G++PA+++ LD N
Sbjct: 6 VIEAEPRLEQGSSASRRLRRAGKLPAILYGGHADPVAITLDHN----------------- 48
Query: 82 QIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFV 139
+IL +++ F S + + S ++L D + P VH D L+ V
Sbjct: 49 ---AILLNLKHDAFYSHILTVNLNGKSERAILRDVQRHPFKPTLVHVD--------LLRV 97
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLD 198
AD+ ++V VP+ F + C G+K GG + + + T ++ C ++ IEVDV++L
Sbjct: 98 SADEA--IRVHVPLSFVNEDICKGVKTGGGMINRQLTEVEIECLPGNLPETIEVDVADLG 155
Query: 199 IGDRVFMSDI 208
+GD + +SD+
Sbjct: 156 VGDSLHLSDL 165
>gi|90416946|ref|ZP_01224875.1| probable ribosomal protein L25 [gamma proteobacterium HTCC2207]
gi|90331293|gb|EAS46537.1| probable ribosomal protein L25 [gamma proteobacterium HTCC2207]
Length = 215
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 24/183 (13%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A RE TG S R R +PA+V+ +++P++ ++ + +
Sbjct: 6 TLHAKGREDTGKGASRRLRRLAAEVPAIVYGG--------KKTPAQISLIHKD------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K++E F S L I G V+L + PIK IL+L F+ + T
Sbjct: 52 AKALENEAFYSHVIALDID-GKSEDVILKDVQRHPIK-------PVILHLDFLRVNKKTL 103
Query: 147 LKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L+ P+ F + C G+K GG + T + C + + IEVD++ ++IG + +
Sbjct: 104 LQTKAPIHFINEDICVGVKIGGGLIAHTMTEIDISCLPQDLPEYIEVDMAAVEIGQTLHI 163
Query: 206 SDI 208
SDI
Sbjct: 164 SDI 166
>gi|403253524|ref|ZP_10919825.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga
sp. EMP]
gi|402811058|gb|EJX25546.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga
sp. EMP]
Length = 215
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 91/196 (46%), Gaps = 21/196 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQI-LSTERKQIHSI 86
+++A RE G R + R R +G +PAVV+ P+ + I + +R + +
Sbjct: 3 SLEARVREVKGKREARRLRRRGEVPAVVYG------------PATEPIPVKIKRSVLEKL 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
++ S P+Q+ + V V RD+ + +++L F G
Sbjct: 51 FHTI------SEATPIQLIIKDDQGNTMAEKTVFLKMVQRDKVSETVVHLDFYEPTKGHR 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++++VP K V G++KGG+L+ + + + +IEVDVS+LD+GD +
Sbjct: 105 MRINVP--LKVVGKPVGVEKGGFLEVFHEEIPVETDPDKVPQEIEVDVSSLDLGDVIHAK 162
Query: 207 DIEVHPSWKLLSKNEK 222
D+++ K L + E+
Sbjct: 163 DLKLPEGVKCLLEEEE 178
>gi|268317962|ref|YP_003291681.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodothermus
marinus DSM 4252]
gi|262335496|gb|ACY49293.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodothermus
marinus DSM 4252]
Length = 202
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 27/182 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+A PRE TG R + R +G +P +++ + P Q+L + ++ ++
Sbjct: 5 TIEAKPRE-TGKRAARAIRREGWVPCILYGHHV--------EPIPFQMLES---KLRPLI 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ E + LQ+ + +L D V T R L+ F ++
Sbjct: 53 YTTE-----THLVKLQLNGKTWDCILKD--------VEFHPVTDRPLHADFQVLRAEEKV 99
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VPV G + G+++GG L+ + L+ C + I I++DVSNLDIGD + + D
Sbjct: 100 TVTVPVQIVG--TAIGVQRGGVLQIVTHELEVTCLPKDIPAHIDIDVSNLDIGDAIHVGD 157
Query: 208 IE 209
++
Sbjct: 158 LQ 159
>gi|345304242|ref|YP_004826144.1| 50S ribosomal protein L25 [Rhodothermus marinus SG0.5JP17-172]
gi|345113475|gb|AEN74307.1| 50S ribosomal protein L25 [Rhodothermus marinus SG0.5JP17-172]
Length = 202
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 27/182 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+A PRE TG R + R +G +P +++ + P Q+L + ++ ++
Sbjct: 5 TIEAKPRE-TGKRAARAIRREGWVPCILYGHHV--------EPIPFQMLES---KLRPLI 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ E + LQ+ + +L D V T R L+ F ++
Sbjct: 53 YTTE-----THLVKLQLNGKTWDCILKD--------VEFHPVTDRPLHADFQVLRAEEKV 99
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VPV G + G+++GG L+ + L+ C + I I++DVSNLDIGD + + D
Sbjct: 100 TVTVPVQIVG--TAVGVQRGGVLQIVTRELEVTCLPKDIPAHIDIDVSNLDIGDAIHVGD 157
Query: 208 IE 209
++
Sbjct: 158 LQ 159
>gi|206890546|ref|YP_002249253.1| ribosomal protein L25, Ctc-form [Thermodesulfovibrio yellowstonii
DSM 11347]
gi|226736374|sp|B5YG55.1|RL25_THEYD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|206742484|gb|ACI21541.1| ribosomal protein L25, Ctc-form [Thermodesulfovibrio yellowstonii
DSM 11347]
Length = 214
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 93/192 (48%), Gaps = 28/192 (14%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK-SVEL 92
RE TG ++ + RS+G IP V++ ++T + P+ K++++ + +
Sbjct: 11 RERTGKGIARQLRSKGIIPCVIYKN---GQSTPVQIPT---------KELYTFMNIATRE 58
Query: 93 PFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVP 152
F + G +L +V P+ TG++L++ F+ +++V +P
Sbjct: 59 KLFVTLKL-----DGQEKQAILQDYQVDPV-------TGKLLHVDFMEVSATEKIRVTIP 106
Query: 153 VVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
VV G G+K+ G L+ + ++ E I IEVDVS+L++GD V +SDI+
Sbjct: 107 VVLIG--EPIGVKQDKGVLQHGISEIEIEAIPEKIPGHIEVDVSHLEVGDAVHVSDIKFE 164
Query: 212 PSWKLLSKNEKM 223
K++S E++
Sbjct: 165 EGIKVISNPEEV 176
>gi|291614810|ref|YP_003524967.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sideroxydans
lithotrophicus ES-1]
gi|291584922|gb|ADE12580.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Sideroxydans
lithotrophicus ES-1]
Length = 220
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 34/188 (18%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDL-----LDKNTDRRSPSRKQILSTERKQI 83
I A R+ G+ S R R R+P +V+ LD NT + +
Sbjct: 5 ISATTRKAQGTGASRRLRKTNRVPGIVYGAGEATMIELDHNT--------LYYALRNEAF 56
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
H+ + S+EL G SVLL ++ P + ++ ++ F D
Sbjct: 57 HASILSLELD-------------GKKQSVLLRDFQMHPFR-------QQVQHIDFQRVDA 96
Query: 144 GTELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDR 202
++ + VP+ F + PG+K GG + + L+ +C + IEVD+S L++G
Sbjct: 97 KKKVHMKVPLHFLNADVAPGVKVGGGIISHVLNELEIVCLPADLPAAIEVDLSGLELGHS 156
Query: 203 VFMSDIEV 210
V +SD+++
Sbjct: 157 VHVSDVKL 164
>gi|194017996|ref|ZP_03056603.1| ribosomal protein L25, Ctc-form [Bacillus pumilus ATCC 7061]
gi|194010333|gb|EDW19908.1| ribosomal protein L25, Ctc-form [Bacillus pumilus ATCC 7061]
Length = 208
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 53/230 (23%)
Query: 14 NSRTPFSRTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRK 73
N RT F R+T +Q I R G +P V++ KNTD + S
Sbjct: 7 NKRTDFKRST-----LQKI-------------RHSGHVPGVIYG-----KNTDNLAVSLD 43
Query: 74 QI--LSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDE 128
I L T R + + + ++++ G SV++ + P+K VH D
Sbjct: 44 SIDLLKTLRDEGKNTIITLDV-------------NGETKSVMVTELQTDPLKNELVHAD- 89
Query: 129 ETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISP 188
F D E++ DVPV G G+K GG L+ L + I
Sbjct: 90 ---------FQVVDLQREIEADVPVQLIG--ESKGVKDGGVLQQPLFELSITAKPKDIPQ 138
Query: 189 KIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPEP 238
IE D++NL++ D + ++D+ V S+++ + E++ + + E PEP
Sbjct: 139 HIEADITNLEVNDVLTVADLSVQSSYQVNNDPEEVVASILPPQQSEVPEP 188
>gi|168704119|ref|ZP_02736396.1| 50S ribosomal protein L25/general stress protein Ctc [Gemmata
obscuriglobus UQM 2246]
Length = 216
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 80/194 (41%), Gaps = 27/194 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++ R TGSR +AR R QG +PA+V+ + + + Q + + ++
Sbjct: 6 TLKTTARAETGSRAAARLRKQGLVPAIVYGHKQANVSLAVNAKELDQAIRVQHARV---- 61
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
L I G +VL+ ++ D ++++ F D +
Sbjct: 62 ------------LDLDIE-GKTETVLIR-------ELQWDYLGKEMIHVDFERKDRAELV 101
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+V VPV K + P GG L +L CP I I +D++NL +G + + D
Sbjct: 102 RVSVPVALK---NAPKATGGGVLDQPFHALHVECPLGAIPESIAIDITNLTLGHPIHIRD 158
Query: 208 IEVHPSWKLLSKNE 221
+ + P K+L E
Sbjct: 159 LALPPGVKVLDAPE 172
>gi|197106324|ref|YP_002131701.1| 50S ribosomal protein L25 [Phenylobacterium zucineum HLK1]
gi|226736347|sp|B4R8Q7.1|RL25_PHEZH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|196479744|gb|ACG79272.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Phenylobacterium zucineum HLK1]
Length = 208
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 85/180 (47%), Gaps = 28/180 (15%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTE-RKQIHS--ILKSV 90
RE TG+ + R G +P V++ D + P + + E RK +++ +L +
Sbjct: 11 RERTGTGGARDTRRSGMVPGVLYGGD--------KDPVAIAVRANEFRKALYTGKLLGHL 62
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
+ + T P+ +A + +H + + +L V D+ ++K++
Sbjct: 63 VTLKYGNETQPVIAKA---------------VDMHPVTDEPQHFDLYRV--DEHQQIKIE 105
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
VPV F + PGLK+GG L +L CPA+ I +I D++ L+IG + ++D+++
Sbjct: 106 VPVHFTNQDDSPGLKRGGTLNVALHTLTVSCPADSIPEEIVFDLTGLEIGATIRVADLKL 165
>gi|365859122|ref|ZP_09399000.1| ribosomal protein L25, Ctc-form [Acetobacteraceae bacterium
AT-5844]
gi|363713021|gb|EHL96680.1| ribosomal protein L25, Ctc-form [Acetobacteraceae bacterium
AT-5844]
Length = 215
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 80/181 (44%), Gaps = 21/181 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I+A RE G + R QG +PAV++ + +++ + + ++K
Sbjct: 7 IEAEARELAGKGAARATRRQGLVPAVIYG-----------AKEEATLIALDPR---DVMK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ + S + + I+ G+ L+ + P+K L++ F G ++
Sbjct: 53 EMHKGGWQSHLYEVAIKGGATVRTLMRDVQFHPLK-------DTPLHVDFQRLAPGQLIR 105
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V VP+VF + PG+K+GG + ++ L+ L + + E+D+++ IG D+
Sbjct: 106 VKVPLVFLNEATNPGVKEGGVINAVYRELEVLSDPDQVPEHFEIDLADFGIGHSFHWDDV 165
Query: 209 E 209
+
Sbjct: 166 K 166
>gi|160872526|ref|ZP_02062658.1| ribosomal protein L25, Ctc-form [Rickettsiella grylli]
gi|159121325|gb|EDP46663.1| ribosomal protein L25, Ctc-form [Rickettsiella grylli]
Length = 237
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 27/212 (12%)
Query: 22 TTSYYHTIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTER 80
TT++ + A R+ GS S R R + R+PA+++ ++ P +S E
Sbjct: 3 TTNHSFELTAQTRKMFGSGASRRLRRLENRVPAILYGA------SEPPLP-----ISLEH 51
Query: 81 KQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVW 140
Q+ L+++E F S + I +VL D + R IL++
Sbjct: 52 NQV---LRALENEAFYSHILTINIEGTEQKAVLKD--------LQRHAYKPYILHMDLQR 100
Query: 141 ADDGTELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
++ + VP+ FKG PG+K +GG L + TS++ C + +EVDVS L +
Sbjct: 101 VSAKEKITMSVPLHFKGETEAPGVKDEGGVLTKLLTSVEVRCLPVSLPEYLEVDVSKLRL 160
Query: 200 GDRVFMSDIEVHPSWKL---LSKNEKMPLCKI 228
+ + +S + + +L +S E PL I
Sbjct: 161 DESISLSQLHLPEGVELTAAISHEEDRPLVNI 192
>gi|150387891|ref|YP_001317940.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus
metalliredigens QYMF]
gi|149947753|gb|ABR46281.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus
metalliredigens QYMF]
Length = 204
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 89/209 (42%), Gaps = 29/209 (13%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TGS S R R G +PAV++ + + NT R ++ + R Q L V +
Sbjct: 11 RNETGSNASHRSRDLGNVPAVIYGKSI---NTLTVEIERTEVEAFVRNQGGKGLVQVNVG 67
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
TTF +++ RD TG I+++ F + ++ VP+
Sbjct: 68 GQPYTTFVKEMQ--------------------RDPVTGMIMHVDFQQVNQDEQIHTMVPI 107
Query: 154 VFKGVESCPGLKKGGYL--KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
+ KG ++KGG + +R L+ C A I K E D+SN GD + +SD+E
Sbjct: 108 ILKG---RGFVEKGGVTVQQQVR-ELEVQCFAGSIPEKFEFDISNFRPGDTLKVSDVEFG 163
Query: 212 PSWKLLSKNEKMPLCKISATKLENPEPAV 240
+++ E + + K+ + E V
Sbjct: 164 EEVSIINNLESVIASIATPAKIIDDEGEV 192
>gi|255526076|ref|ZP_05392999.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
carboxidivorans P7]
gi|296187125|ref|ZP_06855523.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7]
gi|255510262|gb|EET86579.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
carboxidivorans P7]
gi|296048319|gb|EFG87755.1| ribosomal protein L25, Ctc-form [Clostridium carboxidivorans P7]
Length = 202
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 2/64 (3%)
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++ DVP++F G + +KGG ++ RT++K C E+I I+VDVS L+IGD ++
Sbjct: 99 IQTDVPILFMGEDFVS--RKGGVVQKERTNVKVQCKYEYIPKHIDVDVSKLEIGDSYRVA 156
Query: 207 DIEV 210
DIE+
Sbjct: 157 DIEL 160
>gi|410453263|ref|ZP_11307221.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
bataviensis LMG 21833]
gi|409933386|gb|EKN70314.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
bataviensis LMG 21833]
Length = 211
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 133 ILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEV 192
IL++ F+ D +++ VDV +V G G+K GG L+ L ++I P+IEV
Sbjct: 86 ILHVDFLAVDKSSKINVDVRLVLVG--EAAGVKDGGVLQQPVHQLSITSTPDNIPPQIEV 143
Query: 193 DVSNLDIGDRVFMSDI 208
D+SNL +G+ V DI
Sbjct: 144 DISNLQVGETVLAGDI 159
>gi|110833378|ref|YP_692237.1| 50S ribosomal protein L25 [Alcanivorax borkumensis SK2]
gi|123050701|sp|Q0VS83.1|RL25_ALCBS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|110646489|emb|CAL15965.1| 50S ribosomal protein L25 [Alcanivorax borkumensis SK2]
Length = 214
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 95/211 (45%), Gaps = 28/211 (13%)
Query: 29 IQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A R TG S R R Q R+P +++ + + Q++S E +++
Sbjct: 7 LNAESRSDTGKGASRRLRRLQERVPGILYGGE-----------AEPQMISVELRELK--- 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K++E F S L++ +VL D + R G L++ + D ++
Sbjct: 53 KALENEAFYSHILTLKLDGADVQAVLRD--------MQRHPAKGHPLHVDLLRVDKTHKI 104
Query: 148 KVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ VP+ F ES G+KK GG ++ ++ C +H+ IEVD++N ++ V +S
Sbjct: 105 TMSVPLHFTNEESSIGVKKQGGEIQHNFAEVEVSCLPQHLPEFIEVDMANAELDSVVHLS 164
Query: 207 DIEVHPSWKL----LSKNEKMPLCKISATKL 233
D+++ +L L ++ P+ + K+
Sbjct: 165 DLKLPKGVELTQLALGEDHDQPVAAVHQPKV 195
>gi|373111233|ref|ZP_09525493.1| 50S ribosomal protein L25 [Myroides odoratimimus CCUG 10230]
gi|423132567|ref|ZP_17120217.1| 50S ribosomal protein L25 [Myroides odoratimimus CCUG 12901]
gi|423135745|ref|ZP_17123390.1| 50S ribosomal protein L25 [Myroides odoratimimus CIP 101113]
gi|423329472|ref|ZP_17307278.1| 50S ribosomal protein L25 [Myroides odoratimimus CCUG 3837]
gi|371639161|gb|EHO04780.1| 50S ribosomal protein L25 [Myroides odoratimimus CCUG 12901]
gi|371640386|gb|EHO05988.1| 50S ribosomal protein L25 [Myroides odoratimimus CIP 101113]
gi|371641294|gb|EHO06881.1| 50S ribosomal protein L25 [Myroides odoratimimus CCUG 10230]
gi|404603100|gb|EKB02775.1| 50S ribosomal protein L25 [Myroides odoratimimus CCUG 3837]
Length = 202
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 96/205 (46%), Gaps = 27/205 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+ RE G + R+ G +P V++ + + K ++ T +H+++
Sbjct: 5 TIKGSERESVGKVSTKALRNAGMVPCVLYGGTEAAVHFSAEEKAFKNLVYTP--NVHTVV 62
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+++ G + +L + P+ + +IL++ F D E+
Sbjct: 63 --------------IELEGGKKFNAILQDIQFHPV-------SDKILHIDFYQLHDDKEI 101
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+DVPV G + G+ GG L LK ++ +EV++SNL++G++++++D
Sbjct: 102 TLDVPVKITG--NSKGVMAGGVLNLNLRKLKVKALPANLPDFVEVNISNLEMGNKLYVTD 159
Query: 208 IEVHPSWKLLSKNEKMPLCKISATK 232
+ V+ ++KLL + + +C++ ++
Sbjct: 160 VPVN-NYKLLHTDNTV-ICQVRISR 182
>gi|167031780|ref|YP_001667011.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida GB-1]
gi|189042366|sp|B0KND5.1|RL25_PSEPG RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166858268|gb|ABY96675.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
putida GB-1]
Length = 197
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 24/180 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G S R R IPAVV+ D Q L+ K+I + +
Sbjct: 6 LNAQARTDLGKGASRRLRHAASIPAVVYGGD-----------KEAQSLTIVAKEIAKLFE 54
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ E + S L + G+ +V++ + + P K G I++ FV G +L
Sbjct: 55 N-EAAY--SHVIELNVD-GAKQNVVVKAMQRHPAK-------GFIMHADFVRVVAGQKLT 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV F G E P +KKGG + + + ++ C A+ + IEVD++N ++G + +SD+
Sbjct: 104 AKVPVHFIG-EEAP-VKKGGEISHVVSEIEVSCEAKDLPEFIEVDLANAEVGTIIHLSDL 161
>gi|345022174|ref|ZP_08785787.1| 50S ribosomal protein L25/general stress protein Ctc
[Ornithinibacillus scapharcae TW25]
Length = 198
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 25/165 (15%)
Query: 44 RDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQ 103
R RS G IPAVV+ D+ T S + +L RK + + S+EL
Sbjct: 19 RLRSNGEIPAVVYGSDI---KTVSISINNSDLLKALRKGGRNGIISLELN---------- 65
Query: 104 IRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPG 163
G VLL D+ T IL+ F+ + TE+ V VV KG + G
Sbjct: 66 ---GKSKDVLLRD-------YQNDKITRDILHADFLQVNKNTEIDTRVSVVLKG--TSKG 113
Query: 164 LKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
K GG + + L A+ I E+D++ +IGD V + D+
Sbjct: 114 EKAGGIVNQVLHELDITAKADDIPDTFEIDITKFEIGDTVSVGDL 158
>gi|408370955|ref|ZP_11168727.1| 50S ribosomal protein L25/general stress protein Ctc [Galbibacter
sp. ck-I2-15]
gi|407743512|gb|EKF55087.1| 50S ribosomal protein L25/general stress protein Ctc [Galbibacter
sp. ck-I2-15]
Length = 203
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 94/205 (45%), Gaps = 28/205 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+ RE G + R+ G++P V++ D + S E K ++
Sbjct: 5 TIKGSQRESVGKVSTKALRNAGKVPCVIYGGD------------KALHFSAEEKAFKDLV 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + T + + G+ + +L + P+ T IL++ F +D E+
Sbjct: 53 YTPN-----AHTVVISLEDGASYNAILQDIQFHPV-------TDTILHIDFYQLEDDREV 100
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+++PV GV PG+ GG L+ LK ++ IE D+S L+IG++++++
Sbjct: 101 TIEIPVRTVGV--APGVLAGGVLRLNSRKLKVKALPANLPDYIEADISGLEIGNKLYVTK 158
Query: 208 IEVHPSWKLLSKNEKMPLCKISATK 232
+ + ++K++ + + +C++ ++
Sbjct: 159 V-ANENYKIMHPDNTV-VCQVRVSR 181
>gi|350552099|ref|ZP_08921306.1| 50S ribosomal protein L25 [Thiorhodospira sibirica ATCC 700588]
gi|349795165|gb|EGZ48968.1| 50S ribosomal protein L25 [Thiorhodospira sibirica ATCC 700588]
Length = 211
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+QA R G S R R G++PA+++ + Q +S + +IL
Sbjct: 7 LQAESRTDQGKGASRRLRRAGKLPAILYG-----------AGKEPQSISLDHN---TILL 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F S L + G V+L + P K IL+L +G +++
Sbjct: 53 NLAHEAFYSHILTLTLN-GKTERVILRDLQRHPFKP-------VILHLDLQRVSEGEKIR 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VP+ F ++C G+K GG + + + T ++ C EH+ IEVDV+N+ G+ + +S
Sbjct: 105 MHVPLHFINEQNCVGVKLGGGMITHQLTDVEVECLPEHLPEFIEVDVANMQAGESLHLSQ 164
Query: 208 IEV 210
+++
Sbjct: 165 LQM 167
>gi|339502103|ref|YP_004689523.1| 50S ribosomal protein L25 [Roseobacter litoralis Och 149]
gi|338756096|gb|AEI92560.1| 50S ribosomal protein L25 [Roseobacter litoralis Och 149]
Length = 212
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 77/182 (42%), Gaps = 21/182 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG + + R G +P +VF D+ P I + ++K +
Sbjct: 13 RTGTGKGAARQARRDGMVPGIVFGGDV--------DPLPINI------PFNVLIKKLREG 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ST F +++ D +V+ V R ++ F+ T++ + + V
Sbjct: 59 RFKSTLFNMKVEGH-------DDVRVICRDVQRHVVKDLPTHIDFMRLKRTTQINLFIAV 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
G E PGLKKGG L IR ++ + A I I +D+S ++IGD + +S + +
Sbjct: 112 EVDGEEEAPGLKKGGVLTLIRPEVELIVTAGDIPDHITIDISEMEIGDNITISSVNLPEG 171
Query: 214 WK 215
K
Sbjct: 172 AK 173
>gi|17545113|ref|NP_518515.1| 50S ribosomal protein L25 [Ralstonia solanacearum GMI1000]
gi|71153161|sp|Q8Y2E2.1|RL25_RALSO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|17427404|emb|CAD13922.1| putative 50s ribosomal protein l25 (general stress protein ctc)
[Ralstonia solanacearum GMI1000]
Length = 206
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 83/183 (45%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ PA+++ + + +++ + ++ LK
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYG-----------AGAEPKLIELDHNALYHALK 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ +++ AG LL ++ P K +L++ F ++
Sbjct: 52 K---EAFHSSILDIEV-AGKVEKALLRDFQLHPFK-------QLVLHVDFQRVSATEKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I ++ C + IEVD+ NL+IG + +SD
Sbjct: 101 VKVPLHFLNQETAPGVKLGHGIVNHILNDVEVSCLPADLPEFIEVDLGNLEIGQTLHISD 160
Query: 208 IEV 210
+++
Sbjct: 161 LKL 163
>gi|333907087|ref|YP_004480673.1| 50S ribosomal protein L25 [Marinomonas posidonica IVIA-Po-181]
gi|333477093|gb|AEF53754.1| 50S ribosomal protein L25 [Marinomonas posidonica IVIA-Po-181]
Length = 192
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 86/210 (40%), Gaps = 27/210 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+I A+ R G S R R+QG +PAV++ D P+ E +L
Sbjct: 4 SINAVARSEEGKGASRRLRNQGLVPAVIYGGD--------AEPASVSFKDNE------LL 49
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K+V P F + + + ++ KVL + R TG ++++ + +
Sbjct: 50 KAVSTPGFLTAVVEVNVDG--------NAQKVLVKALQRHPATGDVMHMDLQRVKEDAVI 101
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYL-CPAEHISPKIEVDVSNLDIGDRVFMS 206
VP+ F G+ K G +I L + C ++ +EVD++ +GD +S
Sbjct: 102 TTRVPLNFINAAQSDGVSKQGGRLTIEAKLAEVRCLPANLPEVLEVDIAKGQLGDIFHLS 161
Query: 207 DIEVHPSWKLLS----KNEKMPLCKISATK 232
D+ +L+S ++ P+ +I K
Sbjct: 162 DVIAPEGVELISLLKGEDHDQPIARIGKAK 191
>gi|389737032|ref|ZP_10190525.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
sp. 115]
gi|388437814|gb|EIL94578.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
sp. 115]
Length = 218
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 23/188 (12%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S H I+A R+ G S R R G +PAVV+ + ++P QI +
Sbjct: 2 SQTHEIKAQSRKDEGKGASRRLRHAGFVPAVVYGAE--------QAPQNIQI------EH 47
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
++IL + + +F S+ L + G VL+ + P K ++++ F+ ++
Sbjct: 48 NTILLAAKHEWFFSSILDLNVD-GKVQKVLVRDWQKHPFK-------QLMMHMDFLRINE 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDR 202
L+V VP+ F E+ K G + S T L+ C +++ IE+D+++L GD
Sbjct: 100 KEALRVSVPLHFLNQEASAAGKTSGVVISHNLTELEISCLPKNLPEFIELDLADLKPGDI 159
Query: 203 VFMSDIEV 210
+ MS I++
Sbjct: 160 IHMSQIKL 167
>gi|157690834|ref|YP_001485296.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
pumilus SAFR-032]
gi|166987890|sp|A8F919.1|RL25_BACP2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|157679592|gb|ABV60736.1| stress induced RNA binding ribosomal protein L25p family [Bacillus
pumilus SAFR-032]
Length = 208
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 96/230 (41%), Gaps = 53/230 (23%)
Query: 14 NSRTPFSRTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRK 73
N RT F R+T +Q I R G +P V++ KNTD + S
Sbjct: 7 NKRTDFKRST-----LQKI-------------RHSGHVPGVIYG-----KNTDNLAVSLD 43
Query: 74 QI--LSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDE 128
I L T R + + + ++++ G SV++ + P+K VH D
Sbjct: 44 SIDLLKTLRDEGKNTIITLDV-------------NGETKSVMVTELQTDPLKNELVHAD- 89
Query: 129 ETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISP 188
F D E++ DVPV G G+K GG L+ L + I
Sbjct: 90 ---------FQVVDLQREIEADVPVQLIG--ESKGVKDGGVLQQPLFELSITAKPKDIPQ 138
Query: 189 KIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPEP 238
IE D++NL++ D + ++D+ V S+++ + E++ + + E PEP
Sbjct: 139 HIEADITNLEVNDVLTVADLPVQSSYQVNNDPEEVVASILPPQQSEVPEP 188
>gi|333922332|ref|YP_004495912.1| 50S ribosomal protein L25 [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333747893|gb|AEF93000.1| 50S ribosomal protein L25 [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 210
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 29/212 (13%)
Query: 29 IQAIPRECTGSRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A PRE +R S R R QG IP V++ + + +S + K++ IL
Sbjct: 6 LNANPREER-TRSSLRQIREQGGIPGVLYGKQ-----------TGSMAISVDAKELKKIL 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
SV +T + + G+ +V++ S ++ +HR + ++ F + T++
Sbjct: 54 GSVN---GRNTLINMNVN-GAKRTVIVKSLQM--DHLHRGMQ-----HVDFQEVSENTKI 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VPV G + G+ GG ++ S++ C I IEVD+SNL+IGD + +SD
Sbjct: 103 RTVVPVHLVG--TPIGVTHGGIIQHDLRSVEVECLPSQIPNHIEVDISNLEIGDALSVSD 160
Query: 208 IEVHPSWKLLSKNEKMPLCKISATKLENPEPA 239
+ + P K+L + + PEPA
Sbjct: 161 LNLPPGVKVLDHPHT---TVVGVANAKAPEPA 189
>gi|389571466|ref|ZP_10161561.1| ribosomal protein L25, Ctc-form [Bacillus sp. M 2-6]
gi|388428866|gb|EIL86656.1| ribosomal protein L25, Ctc-form [Bacillus sp. M 2-6]
Length = 208
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 94/230 (40%), Gaps = 53/230 (23%)
Query: 14 NSRTPFSRTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRK 73
N RT F R+T +Q I R G +P V++ KNTD + S
Sbjct: 7 NKRTDFKRST-----LQKI-------------RHSGHVPGVIYG-----KNTDNLAVSLD 43
Query: 74 QI--LSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDE 128
I L T R + + + ++++ G SV++ + P+K VH D
Sbjct: 44 SIDLLKTLRDEGKNTIITLDV-------------GGETKSVMVTELQTDPLKNELVHAD- 89
Query: 129 ETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISP 188
F D E+ DVPV G G+K GG L+ L + I
Sbjct: 90 ---------FQVVDLQREIDADVPVQLIG--ESKGVKDGGVLQQPLFELSITAKPKDIPQ 138
Query: 189 KIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPEP 238
IE D++NL++ D + + D+ V ++++ + E++ + + E PEP
Sbjct: 139 NIEADITNLEVNDVLTVGDLSVQSTYQINNDPEEVVASILPPQQSEVPEP 188
>gi|84515241|ref|ZP_01002603.1| Ribosomal protein L25 [Loktanella vestfoldensis SKA53]
gi|84510524|gb|EAQ06979.1| Ribosomal protein L25 [Loktanella vestfoldensis SKA53]
Length = 204
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 80/187 (42%), Gaps = 21/187 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R TG + + R G +P +V+ + P I + +L
Sbjct: 8 LNAKVRAGTGKGAARQARRDGEVPGIVYGGGI--------DPQSINI------PFNYLLT 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F ST F L++ D +V+ V RD +++ + + +
Sbjct: 54 TLRKGRFMSTLFNLKVEG-------QDDVRVVCRGVQRDVVKDLPIHIDLMRLKRTSRVN 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ +PV F ++CPG+KKGG L +R ++ A I + VD++N +GD + +SD+
Sbjct: 107 LFIPVEFINGDTCPGIKKGGVLTVVRNEVEMDVLAGDIPDHLTVDLANAQMGDVIHISDV 166
Query: 209 EVHPSWK 215
+ K
Sbjct: 167 TLPEGAK 173
>gi|350564647|ref|ZP_08933464.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalimicrobium aerophilum AL3]
gi|349777666|gb|EGZ32029.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalimicrobium aerophilum AL3]
Length = 193
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 77/190 (40%), Gaps = 47/190 (24%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQD------LLDKNTDRRSPSRKQILSTERKQIHSIL 87
R G S R R G+IP +++ D LD N +++ I +T
Sbjct: 10 RSTEGKGASRRLRHTGQIPGIIYGGDKDAVSVTLDANFVKKALMNNDIYNT--------- 60
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDS-------GKVLPIKVHRDEETGRILNLVFVW 140
+ + S +V++ V+ I + R + GR++
Sbjct: 61 -----------ILTVDVEGASQENVVIKDMQRHPARADVMHIDLQRVTDNGRVVK----- 104
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
VP+ F G PG+K GG + + +++ C A+++ IE+DVS ++ G
Sbjct: 105 ---------RVPIKFAGAAKAPGVKLGGLMTFFQKTVEIRCSAKNLPTAIEIDVSTMEAG 155
Query: 201 DRVFMSDIEV 210
+ + +SD+++
Sbjct: 156 ESLRLSDLQL 165
>gi|163753734|ref|ZP_02160857.1| 50S ribosomal subunit protein L25 [Kordia algicida OT-1]
gi|161325948|gb|EDP97274.1| 50S ribosomal subunit protein L25 [Kordia algicida OT-1]
Length = 199
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 95/205 (46%), Gaps = 28/205 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI RE G + R+ G++P V++ D +P S E S
Sbjct: 5 TINGSQRESVGKVATKALRNAGKVPCVLYGGD---------NPLH---FSAEEL---SFS 49
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K V P + T + + GS + +L + P+ T +IL++ F D E+
Sbjct: 50 KLVYTP--NAHTVVIALEDGSTHNAILQDIQFHPV-------TDKILHIDFYRLFDDKEV 100
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+D+PV K V PG+ GG L+ + L+ ++ IE D+S L IG++++++
Sbjct: 101 TMDIPV--KVVGKSPGVMNGGVLRLNKRKLRVKAIPANLPDFIEADISELKIGNKLYVTA 158
Query: 208 IEVHPSWKLLSKNEKMPLCKISATK 232
++ + ++KLL + + +C++ ++
Sbjct: 159 LQ-NENYKLLHADNTV-VCQVRISR 181
>gi|158522828|ref|YP_001530698.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfococcus
oleovorans Hxd3]
gi|226736308|sp|A8ZXZ4.1|RL25_DESOH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|158511654|gb|ABW68621.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfococcus
oleovorans Hxd3]
Length = 217
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 83/192 (43%), Gaps = 25/192 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+Q R+ G R QG +PA+V+ + P L+ + +LK
Sbjct: 6 LQVKTRQMAGGPTPKALRRQGFVPAIVYGH--------KNDPLP---LAVDDHTFRLLLK 54
Query: 89 SVELPFFCSTTFPLQIRAGSGS-SVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
S L I G+ S +V+L + P+ + ++++ F D ++
Sbjct: 55 DAGQQALLS----LVIDDGAASKTVMLKELQQHPVSL-------KLIHADFHEVDLTKKI 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VPV GV C G K+GG L+ IR L+ C I I +D+S LDIGD V ++D
Sbjct: 104 TTYVPVATTGV--CKGEKEGGVLQLIRRELEVRCLPGLIPESIAIDISALDIGDSVHVAD 161
Query: 208 IEVHPSWKLLSK 219
IE +L+ +
Sbjct: 162 IEAPEGVELVHE 173
>gi|149194451|ref|ZP_01871548.1| 50S ribosomal protein L25/general stress protein Ctc [Caminibacter
mediatlanticus TB-2]
gi|149135626|gb|EDM24105.1| 50S ribosomal protein L25/general stress protein Ctc [Caminibacter
mediatlanticus TB-2]
Length = 178
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE T + + R G + A ++ + + N + + + R + H I
Sbjct: 2 LEGIIRESTSKSATKKLRRDGYLIANIYGKGQENINA---AFKKSDFIKYMRNKEHLI-- 56
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
FP+++ +V+ + +D TG +L++ + A DG +
Sbjct: 57 -----------FPVKVGNKEFKAVVQEY--------QKDPVTGDLLHVDLLIAQDGVKQY 97
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VP+ KG + GLK G L R +K E + E+DVSNLD+GD + + DI
Sbjct: 98 FYVPIKVKG--TPIGLKNKGVLVYHRRRIKVKSTPEKLPDYFELDVSNLDVGDNILIRDI 155
Query: 209 E 209
E
Sbjct: 156 E 156
>gi|166154141|ref|YP_001654259.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis 434/Bu]
gi|166155016|ref|YP_001653271.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2b/UCH-1/proctitis]
gi|301335381|ref|ZP_07223625.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2tet1]
gi|339625553|ref|YP_004717032.1| 50S ribosomal protein L25, Ctc-form [Chlamydia trachomatis L2c]
gi|226736297|sp|B0B926.1|RL25_CHLT2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736299|sp|B0BAQ5.1|RL25_CHLTB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|165930129|emb|CAP03613.1| LSU ribosomal protein L25 [Chlamydia trachomatis 434/Bu]
gi|165931004|emb|CAP06567.1| LSU ribosomal protein L25 [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|339461033|gb|AEJ77536.1| ribosomal protein L25, Ctc-form [Chlamydia trachomatis L2c]
gi|440526614|emb|CCP52098.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2b/8200/07]
gi|440536438|emb|CCP61951.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2b/795]
gi|440537331|emb|CCP62845.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L1/440/LN]
gi|440538220|emb|CCP63734.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L1/1322/p2]
gi|440539110|emb|CCP64624.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L1/115]
gi|440540000|emb|CCP65514.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L1/224]
gi|440540890|emb|CCP66404.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2/25667R]
gi|440541778|emb|CCP67292.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L3/404/LN]
gi|440542667|emb|CCP68181.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2b/UCH-2]
gi|440543558|emb|CCP69072.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2b/Canada2]
gi|440544449|emb|CCP69963.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2b/LST]
gi|440545339|emb|CCP70853.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2b/Ams1]
gi|440546229|emb|CCP71743.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2b/CV204]
gi|440914491|emb|CCP90908.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2b/Ams2]
gi|440915381|emb|CCP91798.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2b/Ams3]
gi|440916272|emb|CCP92689.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2b/Canada1]
gi|440917166|emb|CCP93583.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2b/Ams4]
gi|440918057|emb|CCP94474.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis L2b/Ams5]
Length = 185
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSILKSVE 91
RE V + R QG IPAV+++ + L + D R S+ L ++E
Sbjct: 8 RETDKKSVIKKIRQQGGIPAVLYSGGKSLANIVVDARVFSK-------------FLSTLE 54
Query: 92 LPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDV 151
ST F L +++ D I+ H T +++L F DG +++++V
Sbjct: 55 SGALASTVFTLSYEGREIKALVKD------IQYH--VTTYDVIHLDFEELVDGRDVRLNV 106
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
P+ C G+K GG L+ + ++ +C + I P +E+DV +L + + +SDI
Sbjct: 107 PIRCINTVDCVGVKLGGSLRQVIRCIRVVCKPKDIVPFLELDVQSLGLSQTLKLSDI 163
>gi|32266993|ref|NP_861025.1| 50S ribosomal protein L25 [Helicobacter hepaticus ATCC 51449]
gi|71153145|sp|Q7VG30.1|RL25_HELHP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|32263045|gb|AAP78091.1| ribosomal protein L25 [Helicobacter hepaticus ATCC 51449]
Length = 178
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 65/128 (50%), Gaps = 20/128 (15%)
Query: 97 STTFPLQIRAGSGSSVLLDSGKVLPIKVH---RDEETGRILNLVFVWADDGTELKVDVPV 153
+ FP+Q+ GK L + + +D T ++++ + A G K VPV
Sbjct: 54 TLIFPVQV-----------GGKTLEVVIQEYQKDPVTNTLIHVDLLLAQKGILNKYKVPV 102
Query: 154 VFKGVESCPGLKKGG--YLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
+ KG + GLK G ++ + R S+K C AE++ E+DVS+LD+GD + + D+
Sbjct: 103 IVKG--NAKGLKNKGVLFISTKRISVK--CAAENLPNAYEIDVSDLDVGDSILIRDLPQF 158
Query: 212 PSWKLLSK 219
+ +L++
Sbjct: 159 DNVNVLNR 166
>gi|423014088|ref|ZP_17004809.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
xylosoxidans AXX-A]
gi|338783019|gb|EGP47388.1| 50S ribosomal protein L25/general stress protein Ctc [Achromobacter
xylosoxidans AXX-A]
Length = 204
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 22/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R GS S R R GR+PA+V+ N + + +I+ L+
Sbjct: 5 ATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIE-----------LDHNEIYHALRKE 53
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
E F ++ +Q+ VLL S V ++L++ F D L+
Sbjct: 54 E---FHASILQMQLEGAKDEQVLLRS-------VQWHAYKPQVLHVDFQRVDANQALRTK 103
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F E P +K G + + L+ C + IEV+++++ G + ++DI+
Sbjct: 104 VPLHFVNAEVSPAVKLSGAIISHVANELEITCLPSALPQFIEVNLADILAGASIHLADIK 163
Query: 210 V 210
+
Sbjct: 164 L 164
>gi|114707023|ref|ZP_01439922.1| 50S ribosomal protein L25 [Fulvimarina pelagi HTCC2506]
gi|114537573|gb|EAU40698.1| 50S ribosomal protein L25 [Fulvimarina pelagi HTCC2506]
Length = 232
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 48/91 (52%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP D + ++ F+ + T + V++PV F+ E PGL++GG L +R ++
Sbjct: 74 KVLPRDYQLDPVRDFLEHVDFLRVGEKTRVTVEIPVHFENEEESPGLERGGVLNVVRHAV 133
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ C A I +D++ +IGD + S I
Sbjct: 134 EVECSANSIPEYFTIDLTGTEIGDTLASSSI 164
>gi|341615434|ref|ZP_08702303.1| 50S ribosomal protein L25/general stress protein Ctc
[Citromicrobium sp. JLT1363]
Length = 226
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 22/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G S R +GR+PAV++ + P + E ++
Sbjct: 6 TLPAETRDRAGKGASRALRREGRVPAVIYGG--------KEEPITIHVEERE------LI 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ +++ F ++ +++ G V + LP V T R ++ F+ G ++
Sbjct: 52 RQLDMGHFMNSIIEIEV---GGKKV-----RTLPKDVALHPVTDRPEHVDFLRLAKGAKV 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VPVVF E PGLKKGG L +R L+ +C A+ I +I + V ++GD + +S+
Sbjct: 104 DVSVPVVFVDEEESPGLKKGGVLNVVRHELELVCEADKIPNEIVISVKGKEVGDSIHISE 163
Query: 208 IEV 210
+++
Sbjct: 164 VDL 166
>gi|74316406|ref|YP_314146.1| 50S ribosomal protein L25 [Thiobacillus denitrificans ATCC 25259]
gi|109893403|sp|Q3SLR4.1|RL25_THIDA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|74055901|gb|AAZ96341.1| Ribosomal protein L25 [Thiobacillus denitrificans ATCC 25259]
Length = 201
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 34/209 (16%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G+ S R R G++P +V+ S + QI H++ K
Sbjct: 10 RELQGTGASRRLRHAGKVPGIVYGG----------STAPVQIELDHNALYHALRKEA--- 56
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ++ L + G+ SVLL + P K ++L++ F D ++ V VP+
Sbjct: 57 -FHASVLSLSVD-GAKESVLLRDAQWHPYK-------QQVLHVDFQRVDKDHKIHVKVPL 107
Query: 154 VFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
F E PG+K GG I L C + IEVD+ L++G + +D+ +
Sbjct: 108 HFLNAEVSPGVKLGGGKPHHIVNELDVQCFPGSLPEFIEVDMGALEVGHSIHANDLVLPA 167
Query: 213 SWKLLSKNEKMPLCKISATKLENPEPAVM 241
+L ++ K ENP AV+
Sbjct: 168 GVEL-----------VAHVKQENPAVAVI 185
>gi|28868318|ref|NP_790937.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. tomato str. DC3000]
gi|422659510|ref|ZP_16721935.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. lachrymans str. M302278]
gi|71153160|sp|Q888C7.1|RL25_PSESM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|28851555|gb|AAO54632.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. tomato str. DC3000]
gi|331018128|gb|EGH98184.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. lachrymans str. M302278]
Length = 203
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAELRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G+ +V++ + + R G +L+ FV G +
Sbjct: 51 AKLLENEASYSHIIELNV-GGTKQNVIIKA-------LQRHPAKGHVLHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E P +KKGG + + + L+ C + + IEVDVS L+IG V +S
Sbjct: 103 LTAIVPVHFIG-EEAP-IKKGGEVSHVTSELEVSCLPKDLPEFIEVDVSALEIGSIVHLS 160
Query: 207 DIE 209
D++
Sbjct: 161 DVK 163
>gi|395767352|ref|ZP_10447887.1| 50S ribosomal protein L25 [Bartonella doshiae NCTC 12862]
gi|395414665|gb|EJF81107.1| 50S ribosomal protein L25 [Bartonella doshiae NCTC 12862]
Length = 206
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 86/204 (42%), Gaps = 22/204 (10%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPAV++ D++ P I E +
Sbjct: 5 YTLKAEIRERVGKGSSRELRRNGLIPAVIYG--------DKQPPLAIAIPYKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T + + S VLP D +++ F+ +
Sbjct: 51 FYKIHAGGFRTTVATIAVGKQKIS--------VLPKDYQLDPVRDFPMHVDFLRISAKSI 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F E PG+K+GG L +R ++ A I IE+D+SN IGD + +S
Sbjct: 103 VDVNIPVHFLNEEIAPGIKQGGVLNIVRHEIECTALANAIPEAIEIDLSNCSIGDSIHIS 162
Query: 207 DIEVHPSWKLLSKNEKMPLCKISA 230
+++ + ++ + I+A
Sbjct: 163 AVQLPQGVTPVIQDRDFTIATIAA 186
>gi|289207531|ref|YP_003459597.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio sp. K90mix]
gi|288943162|gb|ADC70861.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thioalkalivibrio sp. K90mix]
Length = 228
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 92/184 (50%), Gaps = 23/184 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+A R+ GS S R R G++PA+++ + + Q ++ + +++
Sbjct: 6 TIEAEKRDEQGSSASRRLRRAGKLPAILYGGE-----------NDAQPITLDHN---AMV 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+++ F S +++ S ++L D ++ H + T ++L+ V A+ +
Sbjct: 52 HNLKHDAFYSHILTVKLDGKSEKAILRD------VQRHPFKPTIYHVDLLRVSAN--QPI 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKS-IRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+V VP+ F E C G+K GG + S + ++ C + I++DV+ +D+GD + +S
Sbjct: 104 RVHVPLHFHNEEECKGVKLGGGMVSRMLNDIEVECLPGDLPESIDIDVAEMDVGDTIHIS 163
Query: 207 DIEV 210
++++
Sbjct: 164 ELKL 167
>gi|357406690|ref|YP_004918614.1| 50S ribosomal protein L25 [Methylomicrobium alcaliphilum 20Z]
gi|351719355|emb|CCE25031.1| 50S ribosomal protein L25 [Methylomicrobium alcaliphilum 20Z]
Length = 206
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 34/181 (18%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQD------LLDKNTDRRSPSRKQILSTERKQIHSIL 87
RE G+ + R QG++PAV++ + +LD N + + + + S IL
Sbjct: 12 RERPGTAYAKSVRRQGKVPAVIYGGEAGPEMLVLDHNEVVKHLAHEAVYS-------HIL 64
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
V AG +L S V R ++L+L F+ +L
Sbjct: 65 DVV--------------VAGKVQKAILKS-------VQRHPAKAKVLHLDFLRVKANEKL 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
K VP+ F E C G K GG + ++ C E + IEVD+++LD+G + +S
Sbjct: 104 KAQVPLHFINEEICVGAKVGGVVMHSLVDIEVACLPEDLPEYIEVDLASLDLGQSLHVSQ 163
Query: 208 I 208
+
Sbjct: 164 L 164
>gi|414154398|ref|ZP_11410717.1| 50S ribosomal protein L25 [Desulfotomaculum hydrothermale Lam5 =
DSM 18033]
gi|411454189|emb|CCO08621.1| 50S ribosomal protein L25 [Desulfotomaculum hydrothermale Lam5 =
DSM 18033]
Length = 210
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 89/196 (45%), Gaps = 27/196 (13%)
Query: 44 RDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQ 103
R R +G IP VV+ + L + + K+IL + + +T +
Sbjct: 21 RIRDKGEIPGVVYGKHLGTMAVAVDAGALKKILGSVNGR--------------NTLIKMD 66
Query: 104 IRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPG 163
+ G +V++ S ++ P+ H+ RI ++ F + T+++ VPV G G
Sbjct: 67 LNGGK-QTVMVKSLQMDPL--HQ-----RIQHVDFQQVSEDTKIRTVVPVQLVGTPR--G 116
Query: 164 LKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKM 223
+ GG ++ S + C I I+VD+S+L+IGD + +SD++V P KLL
Sbjct: 117 VALGGVVQHDLRSAEIECLPSQIPDAIKVDISHLEIGDALSVSDLQVPPGVKLLDHPHT- 175
Query: 224 PLCKISATKLENPEPA 239
+ ++ PEPA
Sbjct: 176 --TVVGVAVMKAPEPA 189
>gi|419569746|ref|ZP_14106804.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 7--1]
gi|380548996|gb|EIA72885.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 7--1]
Length = 178
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 26/182 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE G + + + G + A ++ + L + NT + ++ +K
Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINTAFK--------------VNEFIK 47
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
V TT ++ GS + V+ + +D T + ++ A G K
Sbjct: 48 EVR----KKTTLIFDVKVGSQTL------SVVVVDYQKDPVTAELKHVDLKVAQKGVISK 97
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV G + GLK G L + LK CPAE++ E+DVS LD+GD + + DI
Sbjct: 98 YMVPVKITG--TAIGLKNKGVLIQSKRRLKVKCPAENLPNFFELDVSKLDVGDALLVRDI 155
Query: 209 EV 210
V
Sbjct: 156 VV 157
>gi|359408729|ref|ZP_09201197.1| ribosomal protein L25, Ctc-form [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356675482|gb|EHI47835.1| ribosomal protein L25, Ctc-form [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 211
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
L+L + + + V VPV F E PGLK GG L +R ++ CPA +I KI VD
Sbjct: 90 LHLDMLRVGKSSTVAVGVPVEFINHEKSPGLKIGGVLNIVRHEVEMNCPAGNIPEKITVD 149
Query: 194 VSNLDIGDRVFMSDI 208
+ + IG+ + +S I
Sbjct: 150 LDGVKIGETIHISAI 164
>gi|339484791|ref|YP_004696577.1| 50S ribosomal protein L25 [Nitrosomonas sp. Is79A3]
gi|338806936|gb|AEJ03178.1| 50S ribosomal protein L25 [Nitrosomonas sp. Is79A3]
Length = 207
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A R G S R R G++PA+++ + Q + + + LK
Sbjct: 5 ISADKRTLQGKGASRRLRGSGKVPAIIYGGE-----------QEPQSIEMDHNDLFHKLK 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F ++ L + AG VLL ++ P K ++L++ F D ++
Sbjct: 54 Q---EAFHASILSLSV-AGKKEQVLLRDIQMHPFK-------HQVLHVDFQRVDKNQKIH 102
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VP+ F E+ PG+K GG + I T + C + + I VD+S L G + +SD
Sbjct: 103 MKVPLHFINAENAPGVKTSGGIVTHILTEVDISCLPDDLPEFISVDLSELTAGHTLHLSD 162
Query: 208 I 208
+
Sbjct: 163 L 163
>gi|254447756|ref|ZP_05061221.1| ribosomal protein L25, Ctc-form [gamma proteobacterium HTCC5015]
gi|198262536|gb|EDY86816.1| ribosomal protein L25, Ctc-form [gamma proteobacterium HTCC5015]
Length = 224
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 90/208 (43%), Gaps = 26/208 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
I+A RE G S R R ++PAV++ P + E ++
Sbjct: 6 VIKAQVREDLGKGASRRLRRADKLPAVLYGSG---------DPVSLTLSHAE------MI 50
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
VE F S L I ++++ D + P K + ++ F G E+
Sbjct: 51 LMVENEAFFSHILELDIDGNKENAIVRDMQR-HPFK-------NLLTHIDFQRVVAGQEI 102
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
V VPV F E+ G+K +GG + + T ++ +C H+ IEVD++ L +G+ + +S
Sbjct: 103 TVSVPVHFINEETSKGVKLEGGEVHHLMTEIEVVCMPRHLPEYIEVDIAELGLGETLHLS 162
Query: 207 DIEVHPSWK--LLSKNEKMPLCKISATK 232
D+++ K LS E+ +S TK
Sbjct: 163 DLKMPEGVKSVALSHGEEHDDGVVSITK 190
>gi|299068047|emb|CBJ39261.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum CMR15]
Length = 206
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 32/217 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ PA+++ + + +++ + ++ LK
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYG-----------AGAEPKLIELDHNALYHALK 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ +++ AG LL ++ P K +L++ F ++
Sbjct: 52 K---EAFHSSILDIEV-AGKVEKALLRDFQLHPFKQ-------LVLHVDFQRVSATEKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I ++ C + IEVD+ NL+IG + +SD
Sbjct: 101 VKVPLHFLNQETAPGVKLGHGIVNHILNDVEVSCLPADLPEFIEVDLGNLEIGQTLHISD 160
Query: 208 IEVHPSWKLLSK---------NEKMPLCKISATKLEN 235
+++ +++ N +P ++SA E+
Sbjct: 161 LKLSKGVTIVTHGGDENPAVANISVPAGEVSAAAAES 197
>gi|260893657|ref|YP_003239754.1| 50S ribosomal protein L25/general stress protein Ctc [Ammonifex
degensii KC4]
gi|260865798|gb|ACX52904.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ammonifex
degensii KC4]
Length = 197
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 22/184 (11%)
Query: 37 TGSRVSARDR--SQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPF 94
TG R+R +QG+IPAVV+ + L + K++L E
Sbjct: 11 TGRGKGYRNRLAAQGKIPAVVYGKALGSVPVEVSLRDLKKVLGGET-------------- 56
Query: 95 FCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVV 154
L+I G G K L ++ + TG ++++ F E+ VPV
Sbjct: 57 IKGKLIDLKI-VGDGWE---RQEKALVKEMQHNPLTGELIHVDFHQVSLTEEVTATVPVE 112
Query: 155 FKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSW 214
G G+KKGG L+ ++ C + I+VDVS+LD+GD +F+ D+ V P
Sbjct: 113 LSG--EPVGVKKGGVLEHFLREVEISCLPTALPEVIKVDVSSLDVGDTIFVRDLPVPPGV 170
Query: 215 KLLS 218
K+L+
Sbjct: 171 KVLA 174
>gi|170723623|ref|YP_001751311.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida W619]
gi|226736353|sp|B1JEQ2.1|RL25_PSEPW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|169761626|gb|ACA74942.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
putida W619]
Length = 198
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 24/182 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R G S R R IPAVV+ D Q L+ K+I +
Sbjct: 5 TLNAQVRSDLGKGASRRLRHSLNIPAVVYGGD-----------KEAQSLTIVAKEIAKLF 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
++ E F S L + G+ +V++ + + P K G I++ FV G +L
Sbjct: 54 EN-EAAF--SHVIELNVD-GAKQNVVVKAMQRHPAK-------GFIMHADFVRVVAGQKL 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VPV F E P +KKGG + + + ++ C A+ + IEVD+ N +IG + +SD
Sbjct: 103 TAVVPVHFIN-EEAP-VKKGGEISHVESQIEVSCEAKDLPEFIEVDLGNAEIGTIIHLSD 160
Query: 208 IE 209
++
Sbjct: 161 LK 162
>gi|334134035|ref|ZP_08507564.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF7]
gi|333608382|gb|EGL19680.1| ribosomal protein L25, Ctc-form [Paenibacillus sp. HGF7]
Length = 207
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 84/178 (47%), Gaps = 25/178 (14%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R QG++P VV+ K TD + + ERK++ +L+S + L I
Sbjct: 22 RRQGKVPGVVYG-----KTTDSLT------VVLERKELVPLLRS-----HPNAVIDLNIE 65
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
G G +L SG V RD + ++++ F + +K V V G G+K
Sbjct: 66 -GVGKRPVLISG------VQRDSLSQDVIHIDFHQINMNEPVKATVAVEIVG--EAAGVK 116
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKM 223
+GG L+ L C + + ++VD+SNL IG+ + +SD+++ + ++ ++ E +
Sbjct: 117 EGGILQVETAQLDVRCLPDDLPDSVQVDISNLGIGENILVSDLKLPENVEVKTEAEDV 174
>gi|325277193|ref|ZP_08142836.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. TJI-51]
gi|324097679|gb|EGB95882.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. TJI-51]
Length = 199
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 24/181 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G S R R IPAVV+ D Q L+ K+I + +
Sbjct: 6 LNAQARTDLGKGASRRLRHSASIPAVVYGGD-----------KEAQSLTIVAKEIAKLFE 54
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ E F S L + G+ +V++ + + P K G I++ FV G +L
Sbjct: 55 N-EAAF--SHVIELNVD-GAKQNVVVKAMQRHPAK-------GFIMHADFVRVVAGQKLT 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV F E P +KKGG + + + ++ C A+ + IEVD++N +IG + +SD+
Sbjct: 104 AVVPVHFIN-EEAP-VKKGGEVSHVESQIEVSCEAKDLPEFIEVDLANAEIGTIIHLSDL 161
Query: 209 E 209
+
Sbjct: 162 K 162
>gi|162455217|ref|YP_001617584.1| 50S ribosomal protein L25/general stress protein Ctc [Sorangium
cellulosum So ce56]
gi|189042374|sp|A9GXJ8.1|RL25_SORC5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|161165799|emb|CAN97104.1| 50S ribosomal protein L25 [Sorangium cellulosum So ce56]
Length = 229
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 92/212 (43%), Gaps = 30/212 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A RE +G S+R R G+IPA+ + ++L ++ + Q+L ++ +
Sbjct: 6 LNATRREDSGKSASSRLRRAGQIPAIAYGRELAPQSVAISPKALLQVLGSDHGK------ 59
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGT 145
++ L I G +V++ PI VH D + V D
Sbjct: 60 --------NSVVELAIENGQTLTVMVRDYDYHPISRELVHAD--------FIQVKLDQ-- 101
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
VDV + F+ V G+ GG L+ I ++ C E I IE+DV+ LD+GD
Sbjct: 102 --PVDVQIPFRCVGKPKGVVTGGVLQQIFRTIPVRCLPEKIPSFIEIDVTELDLGDSYKA 159
Query: 206 SDIEVHPSWKLLSKNEKMPLCKISATKLENPE 237
S +++ K L +++ + ++A + PE
Sbjct: 160 SGLKLPEGVKTLLADDQT-IAVVNAPEKAGPE 190
>gi|386712406|ref|YP_006178728.1| 50S ribosomal protein L25 [Halobacillus halophilus DSM 2266]
gi|384071961|emb|CCG43451.1| 50S ribosomal protein L25 [Halobacillus halophilus DSM 2266]
Length = 220
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 76/174 (43%), Gaps = 30/174 (17%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R +G +P+VV+ +D K S + ++L T R + + + S L I
Sbjct: 22 RQEGNVPSVVYGKD---KEPITVSVNSIELLKTVRDEGKNAIIS------------LDIE 66
Query: 106 AGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCP 162
V+L ++ P+K +H D F D E+ V+VPV +G
Sbjct: 67 GKDSVDVMLHEYQIDPLKDELIHAD----------FYIVDMSQEMDVEVPVHLEG--EAA 114
Query: 163 GLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
G K+GG L+ L +I +I +DVS L+IGD + +SDI +++
Sbjct: 115 GSKEGGVLQQPLYDLAVRAKPANIPDEILIDVSELNIGDSILVSDITSSSGYEI 168
>gi|83943888|ref|ZP_00956345.1| ribosomal protein L25 [Sulfitobacter sp. EE-36]
gi|83953528|ref|ZP_00962250.1| ribosomal protein L25 [Sulfitobacter sp. NAS-14.1]
gi|83842496|gb|EAP81664.1| ribosomal protein L25 [Sulfitobacter sp. NAS-14.1]
gi|83845135|gb|EAP83015.1| ribosomal protein L25 [Sulfitobacter sp. EE-36]
Length = 215
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 31/187 (16%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDL--LDKNTDRRSPSRKQILSTERKQIHSI 86
++A R TG + + R G +P +VF DL L N D + +
Sbjct: 8 LEAFERTGTGKGAARQARRDGMVPGIVFGGDLDPLPINLD----------------FNKL 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVL---LDSGKVLPIKVHRDEETGRILNLVFVWADD 143
L + F +T F L++ V+ + V + H D +
Sbjct: 52 LTKLRAGRFKATLFNLKVEGQEDVRVICRDVQRHVVKDLPTHVD----------LMRLKR 101
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
T++ + + V +G E PGLKKGG L +R ++ + A I I +DVS L+IGD +
Sbjct: 102 TTKINLFIQVEVEGEEVSPGLKKGGVLTLVRPEVELVVTAGDIPDHITIDVSELEIGDSL 161
Query: 204 FMSDIEV 210
+S +++
Sbjct: 162 TISSVKL 168
>gi|381158261|ref|ZP_09867494.1| ribosomal protein L25, Ctc-form [Thiorhodovibrio sp. 970]
gi|380879619|gb|EIC21710.1| ribosomal protein L25, Ctc-form [Thiorhodovibrio sp. 970]
Length = 204
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 76/180 (42%), Gaps = 22/180 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A R G S R R G++P +++ D R P + +E I+K
Sbjct: 7 ISAQARTDVGKGASRRLRRTGQVPGILYGGD--------RLPEMFMLPHSE------IVK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F ST + AG+ + V+L + P K IL++ F G +L+
Sbjct: 53 YAAQESFYSTLLDFDL-AGAKTQVVLKDLQRHPAKPF-------ILHVDFQRVSKGEKLR 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ VP+ F+ + C G+K GG T L C + I VD+ +++G + +SD+
Sbjct: 105 MTVPLHFENEDICAGIKLGGQASHNLTELDIQCLPADLPEYIAVDIQKMELGQTLHVSDL 164
>gi|410452384|ref|ZP_11306374.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
bataviensis LMG 21833]
gi|409934587|gb|EKN71471.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
bataviensis LMG 21833]
Length = 199
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ S + R+ G+IPA+V+ N D +S +S + + ++
Sbjct: 3 TLVAQERKNFKKSTSKKLRNDGKIPAIVYGN-----NIDTKS------ISIKNADLLKVM 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + S + G +V+L + P+ T IL++ F+ D TE+
Sbjct: 52 RDIGRNGILSLSLD-----GKSKNVMLRDYQNDPV-------TREILHVDFLQVDKHTEI 99
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V V+ KG + G K GG K L A I IE+D+++ +IG V ++D
Sbjct: 100 NAKVSVILKG--TSKGEKVGGIAKQYLHELDITAKANDIPNDIEIDITDSEIGHAVKVAD 157
Query: 208 IEVHPSWKLLSKNEKMPLCKISATKLENPEP 238
I+ S ++ + + I K E E
Sbjct: 158 IKKDYSNCSINHEDDETIVMIDYVKSETEEA 188
>gi|334144463|ref|YP_004537619.1| 50S ribosomal protein L25 [Thioalkalimicrobium cyclicum ALM1]
gi|333965374|gb|AEG32140.1| 50S ribosomal protein L25 [Thioalkalimicrobium cyclicum ALM1]
Length = 193
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 77/190 (40%), Gaps = 47/190 (24%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQD------LLDKNTDRRSPSRKQILSTERKQIHSIL 87
R G S R R G+IP +++ D LD N +++ I +T
Sbjct: 10 RSTEGKGASRRLRHTGQIPGIIYGGDKDAVSVTLDANFVKKTLMNNDIYNT--------- 60
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDS-------GKVLPIKVHRDEETGRILNLVFVW 140
+ + S SV++ V+ I + R + GR++
Sbjct: 61 -----------ILTVDVEGASKESVVIKDMQRHPARADVMHIDLQRVTDNGRVVK----- 104
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
VP+ F G PG+K GG + + +++ C A+++ IE+DVS ++ G
Sbjct: 105 ---------RVPIKFVGSAKAPGVKLGGLMTFFQKTVEVRCSAKNLPTAIEIDVSGMEAG 155
Query: 201 DRVFMSDIEV 210
+ + +SD+++
Sbjct: 156 ESLRLSDLQL 165
>gi|296131718|ref|YP_003638965.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermincola
potens JR]
gi|296030296|gb|ADG81064.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermincola
potens JR]
Length = 217
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 76/170 (44%), Gaps = 35/170 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R+ G+IPAV++ +DL +K ++ + + + SIL++
Sbjct: 23 RNHGKIPAVIYGKDLPNK-----------LVEVDVRNLESILRN---------------G 56
Query: 106 AGSGSSVLLDSGKVLPIKV-------HRDEETGRILNLVFVWADDGTELKVDVPVVFKGV 158
AG + + L + P K+ RD G ++++ ++ VP+ G
Sbjct: 57 AGKNAIINLTVEEAKPHKLTVMIKDLQRDPVKGDLMHVDLQKISLTDKIHTTVPIHLTG- 115
Query: 159 ESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
G+KKGG L+S L+ C +I I VD+S LDIGD + ++DI
Sbjct: 116 -EAEGIKKGGILQSGLRELEIECVPANIPDHISVDISGLDIGDSLTVADI 164
>gi|89069015|ref|ZP_01156396.1| ribosomal protein L25 [Oceanicola granulosus HTCC2516]
gi|89045384|gb|EAR51449.1| ribosomal protein L25 [Oceanicola granulosus HTCC2516]
Length = 210
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 7/134 (5%)
Query: 82 QIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWA 141
+ +S+L + F ST F L++ D +V+ V RD ++ F+
Sbjct: 47 EYNSLLTRLRKGRFLSTLFNLKVEGE-------DDVRVICRGVQRDVVKDLPTHVDFMRL 99
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
+++ + +PV F+ + PG+K+GG L +R ++ + A I KI VD++ L+IGD
Sbjct: 100 RRTSKVNLFIPVEFENHGAAPGIKRGGVLTVVRPEVELVVTAGDIPEKITVDLTGLEIGD 159
Query: 202 RVFMSDIEVHPSWK 215
V +S +++ K
Sbjct: 160 TVTISSVDLPEGAK 173
>gi|430741804|ref|YP_007200933.1| 50S ribosomal protein L25 [Singulisphaera acidiphila DSM 18658]
gi|430013524|gb|AGA25238.1| ribosomal protein L25, Ctc-form [Singulisphaera acidiphila DSM
18658]
Length = 216
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 37 TGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPF 94
TGSRVS R R+ G+IPA+++ QD L +S R + ++K
Sbjct: 20 TGSRVSRRLRANGQIPAIIYGHKQDPLP-------------ISLARASVWDMIKK----- 61
Query: 95 FCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVV 154
+ L + + + ++ D + D I++L F + ++ +V +
Sbjct: 62 -STHLAELSVNGATETVIVRD--------IQWDHLGKEIIHLDFARVNADESIETEVKLE 112
Query: 155 FKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+G + PG+ +GG L+ +++ C A I I VDVSNL +G + + D+
Sbjct: 113 LRG--TSPGVSEGGVLEQPVHAVEVTCRANAIPDSIRVDVSNLHLGQSIHVRDL 164
>gi|291277022|ref|YP_003516794.1| Ribosomal protein L25, ctc protein homolog [Helicobacter mustelae
12198]
gi|290964216|emb|CBG40065.1| Ribosomal protein L25, ctc protein homolog [Helicobacter mustelae
12198]
Length = 178
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 116 SGKVLPIKVH---RDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKS 172
GK+L + V +D T IL++ + A G K +PV K V GLK G L
Sbjct: 62 GGKMLDVVVQEYQKDPVTSNILHVDLMLAQKGVVAKYKIPV--KAVGVPVGLKNKGVLIY 119
Query: 173 IRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSK 219
+ + EH+ E+DVS LD+GD + + D+ HP+ K++ K
Sbjct: 120 PKKRVSVQAAPEHLINVYELDVSKLDVGDSILVRDLPEHPNIKVMEK 166
>gi|289433566|ref|YP_003463438.1| ribosomal 50S general stress protein L25/Ctc [Listeria seeligeri
serovar 1/2b str. SLCC3954]
gi|289169810|emb|CBH26348.1| ribosomal 50S general stress protein L25/Ctc [Listeria seeligeri
serovar 1/2b str. SLCC3954]
Length = 207
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 92/224 (41%), Gaps = 39/224 (17%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQ-IHSI 86
T++ RE T R RS+G++P +++ S +S + + I ++
Sbjct: 4 TLEVQKRETTQHSEVTRLRSEGKVPGIIYGYK-----------SENVPVSVDSLELIKAV 52
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADD 143
+ F T G +VLL +V P+K VH D + D
Sbjct: 53 RDNGRNAVFAVTV------DGKKLNVLLHEYQVDPLKDTLVHVD----------LLAVDM 96
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
E++ DV VV G + PG+K GG L+ I +K E + IE+DVS+L+IGD +
Sbjct: 97 NEEVETDVRVVLVG--NAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDVSSLEIGDVL 154
Query: 204 FMSDIEVHPSW------KLLSKNEKMPLCKISATKLENPEPAVM 241
+D+ + + + P + T E PEP +
Sbjct: 155 TTNDLPENKDYVVQVEEEETVVTVSAPRAEEEPTTAEAPEPEAL 198
>gi|392407041|ref|YP_006443649.1| 50S ribosomal protein L25 [Anaerobaculum mobile DSM 13181]
gi|390620177|gb|AFM21324.1| ribosomal protein L25, Ctc-form [Anaerobaculum mobile DSM 13181]
Length = 223
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 79/178 (44%), Gaps = 22/178 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE TG + R R +G +PAV + P K+ + +I I+ +
Sbjct: 13 REETGKNKAKRLRKKGYLPAVFYG------------PGYKESVPV-MVRIDDIIPHLHSS 59
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+ + + G ++ RD T +IL+L F G ++ V VP+
Sbjct: 60 HWKTLVLNVTFPDGKEEMAMIRD-------YQRDPLTRQILHLDFYQILRGHKVMVAVPL 112
Query: 154 VFKGVESCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
V E C G+KKGG L +S+ + P+E I +I +DV LDIG + +SDI++
Sbjct: 113 VLTNKEDCIGVKKGGVLIQSLHEIEMEVLPSE-IPDEIYIDVEGLDIGQGIRVSDIKL 169
>gi|418054349|ref|ZP_12692405.1| 50S ribosomal protein L25 [Hyphomicrobium denitrificans 1NES1]
gi|353211974|gb|EHB77374.1| 50S ribosomal protein L25 [Hyphomicrobium denitrificans 1NES1]
Length = 243
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 84/204 (41%), Gaps = 22/204 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+++A R G + + R G +PAV++ + +P T + + +
Sbjct: 6 SLKATARPRAGKGAARQARRDGNVPAVIYG--------NHETPE------TINLEYNELW 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K V F ST L + G VL +V PI RD L++ F +
Sbjct: 52 KQVLRGHFTSTAIELDVE-GKKHIVLARDVQVDPI---RDTP----LHVDFQRVGKDGMI 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+V +PV F PGLK+GG L +R ++ L P + + EV + L+IG + +S
Sbjct: 104 RVSIPVHFVHEALSPGLKRGGVLNIVRHDVEVLAPYDKLPRFFEVSLEGLEIGRSIHISA 163
Query: 208 IEVHPSWKLLSKNEKMPLCKISAT 231
+ + + KN + I+
Sbjct: 164 VHLPEGVTPVIKNRDFTIATIAGA 187
>gi|422587442|ref|ZP_16662113.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|422654396|ref|ZP_16717139.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. actinidiae str. M302091]
gi|330873313|gb|EGH07462.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. morsprunorum str. M302280]
gi|330967422|gb|EGH67682.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. actinidiae str. M302091]
Length = 203
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAELRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G+ +V++ + + R G +L+ FV G +
Sbjct: 51 AKLLENEASYSHIIELNV-GGTKQNVIIKA-------LQRHPAKGHVLHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E P +KKGG + + + L+ C + + IEVDVS L+IG V +S
Sbjct: 103 LTAIVPVHFIG-EEAP-VKKGGEVSHVTSELEVSCLPKDLPEFIEVDVSALEIGSIVHLS 160
Query: 207 DIE 209
D++
Sbjct: 161 DVK 163
>gi|384082302|ref|ZP_09993477.1| 50S ribosomal protein L25/general stress protein Ctc [gamma
proteobacterium HIMB30]
Length = 210
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 26/210 (12%)
Query: 27 HTIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
+ + A RE G S R R +G +PA+V+ + P Q+ + K
Sbjct: 4 YRLSAQSREEAGKGSSRRLRRLEGLVPAIVYG--------GKNKPKSIQLAHKDLK---- 51
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+++E F S+ L+I G V+L + + P K +L+ F A GT
Sbjct: 52 --RALEEESFYSSVITLEID-GKDEPVILKALQRHPAK-------PLVLHADFQRASAGT 101
Query: 146 ELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
LKV+VPV F SC G+K +GG + ++ C + + IEVD++ +++ +
Sbjct: 102 VLKVNVPVHFLNETSCKGVKMQGGVIHHDAVEIEVSCSPKDLPEFIEVDLAEVELDQVIH 161
Query: 205 MSDIEV--HPSWKLLSKNEKMPLCKISATK 232
+SD++ ++ L+ + +P+ I K
Sbjct: 162 LSDLKAPKGVTFVALAHDSDLPVVSIHKAK 191
>gi|334132962|ref|ZP_08506717.1| 50S ribosomal protein L25 [Methyloversatilis universalis FAM5]
gi|333441872|gb|EGK69844.1| 50S ribosomal protein L25 [Methyloversatilis universalis FAM5]
Length = 202
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 35/184 (19%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQD------LLDKNTDRRSPSRKQILSTERKQIHSIL 87
R+ G+ S R R ++PA+++ D LD N +I RK+
Sbjct: 10 RDAQGTGASRRLRRADQVPAIIYGGDKPATPITLDHN---------EIFHALRKEA---- 56
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
F ++ L + G+ +VLL ++ K+ ++L++ F D +L
Sbjct: 57 -------FHASVLTLNVE-GTKETVLLRDTQMHAYKL-------QVLHVDFQRVDATHKL 101
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
VP F ++ PG+K +GG + + L C + IEVD+S L +G + +S
Sbjct: 102 HTKVPFHFVNADAAPGVKLQGGIVSHVMNELDVQCLPSQLPEFIEVDLSGLSVGQSIHVS 161
Query: 207 DIEV 210
I++
Sbjct: 162 QIKL 165
>gi|15605533|ref|NP_220319.1| 50S ribosomal protein L25 [Chlamydia trachomatis D/UW-3/CX]
gi|237803230|ref|YP_002888424.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis B/Jali20/OT]
gi|237805151|ref|YP_002889305.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis B/TZ1A828/OT]
gi|255311635|ref|ZP_05354205.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis 6276]
gi|255317936|ref|ZP_05359182.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis 6276s]
gi|255349199|ref|ZP_05381206.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis 70]
gi|255503736|ref|ZP_05382126.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis 70s]
gi|255507417|ref|ZP_05383056.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis D(s)2923]
gi|376282810|ref|YP_005156636.1| 50S ribosomal protein L25 [Chlamydia trachomatis A2497]
gi|385240345|ref|YP_005808187.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis G/9768]
gi|385241273|ref|YP_005809114.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis G/11222]
gi|385242200|ref|YP_005810040.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis E/11023]
gi|385243122|ref|YP_005810961.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis G/9301]
gi|385244004|ref|YP_005811850.1| 50S ribosomal protein L25 [Chlamydia trachomatis D-EC]
gi|385244884|ref|YP_005812728.1| 50S ribosomal protein L25 [Chlamydia trachomatis D-LC]
gi|385245810|ref|YP_005814633.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis E/150]
gi|385246730|ref|YP_005815552.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis G/11074]
gi|385270533|ref|YP_005813693.1| 50S ribosomal protein L25 [Chlamydia trachomatis A2497]
gi|386263156|ref|YP_005816435.1| 50S ribosomal protein L25 [Chlamydia trachomatis Sweden2]
gi|389858495|ref|YP_006360737.1| 50S ribosomal protein L25 [Chlamydia trachomatis F/SW4]
gi|389859371|ref|YP_006361612.1| 50S ribosomal protein L25 [Chlamydia trachomatis E/SW3]
gi|389860247|ref|YP_006362487.1| 50S ribosomal protein L25 [Chlamydia trachomatis F/SW5]
gi|7674229|sp|O84805.1|RL25_CHLTR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|3329265|gb|AAC68394.1| General Stress Protein [Chlamydia trachomatis D/UW-3/CX]
gi|231273451|emb|CAX10366.1| LSU ribosomal protein L25 [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274464|emb|CAX11259.1| LSU ribosomal protein L25 [Chlamydia trachomatis B/Jali20/OT]
gi|289525844|emb|CBJ15325.1| LSU ribosomal protein L25 [Chlamydia trachomatis Sweden2]
gi|296435426|gb|ADH17604.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis E/150]
gi|296436350|gb|ADH18524.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis G/9768]
gi|296437281|gb|ADH19451.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis G/11222]
gi|296438209|gb|ADH20370.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis G/11074]
gi|296439143|gb|ADH21296.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis E/11023]
gi|297140710|gb|ADH97468.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis G/9301]
gi|297748927|gb|ADI51473.1| LSU ribosomal protein L25P [Chlamydia trachomatis D-EC]
gi|297749807|gb|ADI52485.1| LSU ribosomal protein L25P [Chlamydia trachomatis D-LC]
gi|347975673|gb|AEP35694.1| LSU ribosomal protein L25P [Chlamydia trachomatis A2497]
gi|371908840|emb|CAX09472.1| LSU ribosomal protein L25 [Chlamydia trachomatis A2497]
gi|380249567|emb|CCE14863.1| LSU ribosomal protein L25 [Chlamydia trachomatis F/SW5]
gi|380250442|emb|CCE13974.1| LSU ribosomal protein L25 [Chlamydia trachomatis F/SW4]
gi|380251320|emb|CCE13085.1| LSU ribosomal protein L25 [Chlamydia trachomatis E/SW3]
gi|438690736|emb|CCP49993.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis A/7249]
gi|438691821|emb|CCP49095.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis A/5291]
gi|438693194|emb|CCP48196.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis A/363]
gi|440525726|emb|CCP50977.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis K/SotonK1]
gi|440527510|emb|CCP52994.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis D/SotonD1]
gi|440528402|emb|CCP53886.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis D/SotonD5]
gi|440529293|emb|CCP54777.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis D/SotonD6]
gi|440530183|emb|CCP55667.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis E/SotonE4]
gi|440531081|emb|CCP56565.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis E/SotonE8]
gi|440531974|emb|CCP57484.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis F/SotonF3]
gi|440532867|emb|CCP58377.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis G/SotonG1]
gi|440533761|emb|CCP59271.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis Ia/SotonIa1]
gi|440534655|emb|CCP60165.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis Ia/SotonIa3]
gi|440535550|emb|CCP61060.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
trachomatis E/Bour]
Length = 185
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 23/177 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSILKSVE 91
RE V + R QG IPAV+++ + L + D R S+ L ++E
Sbjct: 8 RETDKKSVIKKIRQQGGIPAVLYSGGKSLANIVVDARVFSK-------------FLSTLE 54
Query: 92 LPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDV 151
ST F L +++ D I+ H T +++L F DG ++++++
Sbjct: 55 SGALASTVFTLSYEGREIKALVKD------IQYH--VTTYDVIHLDFEELVDGRDVRLNI 106
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
P+ C G+K GG L+ + ++ +C + I P +E+DV +L + + +SDI
Sbjct: 107 PIRCINTVDCVGVKLGGSLRQVIRCIRVVCKPKDIVPFLELDVQSLGLSQTLKLSDI 163
>gi|254468776|ref|ZP_05082182.1| ribosomal protein L25, Ctc-form [beta proteobacterium KB13]
gi|207087586|gb|EDZ64869.1| ribosomal protein L25, Ctc-form [beta proteobacterium KB13]
Length = 229
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 90/198 (45%), Gaps = 27/198 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHS 85
T+ A R+ G+ S R R G++P +++ +D + D + T +Q H
Sbjct: 4 TVTAEKRDVKGTGASRRLRRNGKVPGILYGNHKDAVSIVLDSK---------TLHQQFHK 54
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
F ++ L G+ SVLL ++ P+K G IL++ F +
Sbjct: 55 -------EAFHASILELSTD-GTKESVLLRDYQLEPVK-------GTILHVDFQRVNQNE 99
Query: 146 ELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
++ V+VP F + G+K +GG + I T + C + + IEVD+ +L +G+ V
Sbjct: 100 KIHVNVPFHFINEDIAKGVKLEGGVISHIMTEVDIACLPKDLPQFIEVDLVDLGLGESVH 159
Query: 205 MSDIEVHPSWKLLSKNEK 222
+S++ + +L + E+
Sbjct: 160 LSELNLPEGVELTALTEE 177
>gi|237749455|ref|ZP_04579935.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes OXCC13]
gi|229380817|gb|EEO30908.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes OXCC13]
Length = 209
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 82/201 (40%), Gaps = 29/201 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A R GS S R R+ G P +V+ + + + + + +R+ HS +
Sbjct: 3 IIAYTRAEIGSGASRRLRAAGMAPGIVYGGN--SEPLNIKLDHNALFYALKREAFHSSIL 60
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVL---PIKVHRDEETGRILNLVFVWADDGT 145
+E+ G VLL +V P+ +H D F D
Sbjct: 61 DLEID-------------GKNQQVLLRDFQVHAYKPVVLHVD----------FQRVDANQ 97
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
++ V VP+ F E KK G + T L+ C ++ IEVD+ NL+IG + +
Sbjct: 98 KINVKVPLHFVN-EDASSAKKSGVVHHAVTELEISCLPANLPAFIEVDLGNLEIGQTIHL 156
Query: 206 SDIEVHPSWKLLSKNEKMPLC 226
D+++ +S +E MP+
Sbjct: 157 GDLKLPEGVTAISHDESMPIV 177
>gi|126739655|ref|ZP_01755347.1| ribosomal protein L25 [Roseobacter sp. SK209-2-6]
gi|126719301|gb|EBA16011.1| ribosomal protein L25 [Roseobacter sp. SK209-2-6]
Length = 209
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 81/177 (45%), Gaps = 21/177 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG + R G +P VV+ D+ P QI + +LK ++
Sbjct: 13 RAGTGKGAARAARRAGMVPGVVYGGDV--------EPQAIQI------PFNELLKKLKAG 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ST + L++ + +V+ V RD +L + +++ + +PV
Sbjct: 59 QFKSTLWNLKVEG-------QEDVRVICRDVQRDVVKDLPTHLDLMRLRRTSKINLFIPV 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
F ++CPG+KKGG L +R ++ + A I KI VD+++ IGD + +S I++
Sbjct: 112 EFLNEDTCPGIKKGGMLTVVRPEVELVVTAGDIPEKIVVDLADKAIGDVITISSIDL 168
>gi|163744226|ref|ZP_02151586.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibulbus
indolifex HEL-45]
gi|161381044|gb|EDQ05453.1| 50S ribosomal protein L25/general stress protein Ctc [Oceanibulbus
indolifex HEL-45]
Length = 218
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 79/187 (42%), Gaps = 21/187 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R TG + + R G +P +VF D P I + +L
Sbjct: 8 LEAQVRTGTGKGAARQARRDGMVPGIVFGGD--------NEPLPINI------PFNKLLT 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F +T F L++ D +V+ V R ++ + T++
Sbjct: 54 RLRQGRFKATLFNLKVEG-------HDDVRVICRDVQRHVVKDLPTHIDLMRLKRTTKIN 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ + V KG E CPGLKKGG L +R ++ + A I + VDV+ L+IGD +S +
Sbjct: 107 LFINVEVKGEEECPGLKKGGVLTLVRPEVELVVTAADIPEFVTVDVTGLEIGDSATISRV 166
Query: 209 EVHPSWK 215
++ K
Sbjct: 167 DLPEGAK 173
>gi|335042005|ref|ZP_08535032.1| ribosomal protein L25 [Methylophaga aminisulfidivorans MP]
gi|333788619|gb|EGL54501.1| ribosomal protein L25 [Methylophaga aminisulfidivorans MP]
Length = 234
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 21/180 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+QA R G S R R G++PAVV+ + K+ +S I
Sbjct: 18 VQAEARTDEGKGASRRLRHAGKVPAVVYG-------------AEKEPVSIALDHNQFIRH 64
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
E F+ L I VL D + +I++ F+ D E+
Sbjct: 65 LAEEAFYAHI-LTLNIGKKKEQVVLKDLQR-------HPANDNKIIHADFLRVDAKHEMT 116
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ VP+ F G E G+K GG + + T ++ C + IEVD+S L++ + +S++
Sbjct: 117 MTVPLHFIGEEKAVGVKAGGVVSHVMTEVEIACLPADLPEFIEVDISKLELDHAIHLSEL 176
>gi|386351842|ref|YP_006050090.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodospirillum rubrum F11]
gi|346720278|gb|AEO50293.1| 50S ribosomal protein L25/general stress protein Ctc
[Rhodospirillum rubrum F11]
Length = 179
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/156 (22%), Positives = 71/156 (45%), Gaps = 10/156 (6%)
Query: 75 ILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRIL 134
+LS + IH+ ++ F S F L + G V++ + P+ T +
Sbjct: 11 LLSLAPRLIHTEMRKAG---FSSRLFDLTVEGGETHRVMVQDVQFHPV-------TDMPI 60
Query: 135 NLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDV 194
++ F+ TE+ V +PV F + PGLK+GG L +R ++ + + EVD+
Sbjct: 61 HVDFLRIGKDTEVTVAIPVHFINETASPGLKRGGVLNVVRHEIEVHGRPDALPDFFEVDL 120
Query: 195 SNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISA 230
+ ++GD + + +++ + + +C I+A
Sbjct: 121 TGAEVGDSIHVGVVKIPEGVRPVIAERDFTICTIAA 156
>gi|56695714|ref|YP_166065.1| 50S ribosomal protein L25 [Ruegeria pomeroyi DSS-3]
gi|68053037|sp|Q5LV90.1|RL25_SILPO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56677451|gb|AAV94117.1| ribosomal protein L25 [Ruegeria pomeroyi DSS-3]
Length = 207
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 77/185 (41%), Gaps = 21/185 (11%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A+ R TG + + R G +P +VF D P QI + +LK +
Sbjct: 10 ALERTGTGKGAARQARRDGMVPGIVFGGD--------NEPLPIQI------PFNRLLKML 55
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
+ F ST F L++ V+ V RD +L + + +K+
Sbjct: 56 KAGRFKSTLFNLKVEGHEDVRVICRD-------VQRDVVKDLPTHLDLMRLRRTSRIKLF 108
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+ V F + PGLKKGG L +R ++ A I I VD++ L+IGD V +S + +
Sbjct: 109 IHVDFVNHAAAPGLKKGGVLTVVRPEVELEVTAGDIPESITVDLTGLNIGDVVTISSVTL 168
Query: 211 HPSWK 215
K
Sbjct: 169 PAGAK 173
>gi|385330447|ref|YP_005884398.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
adhaerens HP15]
gi|311693597|gb|ADP96470.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
adhaerens HP15]
Length = 223
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 28/193 (14%)
Query: 22 TTSYYHTIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTER 80
T S I+A PR+ G S R R + R IPA+++ + + + I E
Sbjct: 7 TMSQEFVIEAFPRDDQGRGASRRLRREERKIPAIIYGGN--------KDATPIAIWHNEL 58
Query: 81 KQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVF 138
K K++E F S +++ S +L D + PI H D F
Sbjct: 59 K------KALENEAFFSHVLTVELNGKKESVILKDLQRHPYKPILTHAD----------F 102
Query: 139 VWADDGTELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
+ D E+ V+VP+ F ++ P +K GG ++ +C +++ IEVD++ +
Sbjct: 103 LRVDKDHEIHVNVPLHFINEDTAPAIKLHGGVANHQINEVEVICLPQNLPEFIEVDMTTV 162
Query: 198 DIGDRVFMSDIEV 210
++ V +SD+++
Sbjct: 163 EMDQVVHLSDLKL 175
>gi|451940911|ref|YP_007461549.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
australis Aust/NH1]
gi|451900298|gb|AGF74761.1| 50S ribosomal protein L25/general stress protein Ctc [Bartonella
australis Aust/NH1]
Length = 208
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 83/184 (45%), Gaps = 22/184 (11%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T++A RE G S R G IPA+++ +++ P + E I
Sbjct: 5 YTLKAEIRERVGKGSSRALRRDGLIPAIIYG--------NKQPPLAVAVSYKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F +T +++ G + +VLP D +++ F+ +
Sbjct: 51 FYKIHAGGFRTTVATVEV----GKQKI----QVLPKDYQLDPVRDVPVHVDFLRISAESV 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++VD+PV F + PG+K+GG L +R ++ PA I I++D+S IGD + +S
Sbjct: 103 VQVDIPVHFLNEDIAPGIKRGGVLNIVRHEIECTAPANAIPESIKIDLSGYSIGDSIHIS 162
Query: 207 DIEV 210
+++
Sbjct: 163 AVQL 166
>gi|163858319|ref|YP_001632617.1| 50S ribosomal protein L25 [Bordetella petrii DSM 12804]
gi|226736285|sp|A9I6W5.1|RL25_BORPD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|163262047|emb|CAP44349.1| 50S ribosomal protein L25 [Bordetella petrii]
Length = 207
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
A R GS S R R GR+PA+V+ N + + +I+ L+
Sbjct: 3 FNATARSVQGSSASRRLRRAGRVPAIVYGGSAAPLNIE-----------LDHNEIYHALR 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
E F ++ +Q+ G +VLL S V ++L++ F D L
Sbjct: 52 KEE---FHASILQMQLD-GKEEAVLLRS-------VQWHAYKPQVLHVDFQRVDANQALH 100
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VP+ F E+ P +K + + T L+ C + IEVD+ NL G V +SD
Sbjct: 101 TKVPLHFINGENSPAVKLSSAIISHVVTELEITCLPAALPQYIEVDLGNLLGGGSVHLSD 160
Query: 208 IEV 210
+++
Sbjct: 161 VKL 163
>gi|254515307|ref|ZP_05127368.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR5-3]
gi|219677550|gb|EED33915.1| ribosomal protein L25, Ctc-form [gamma proteobacterium NOR5-3]
Length = 220
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
I+A R G S R RS IPA+++ + P+ I+ RK +
Sbjct: 6 AIEATVRSDLGKGASRRLRRSVDHIPAIIYGA--------GKEPTPLTII---RKDLE-- 52
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
KS+E F S + + ++L D + R +++ F+ D
Sbjct: 53 -KSLENEAFFSQVIDVNVDGDVQPAILKD--------LQRHPARNDVMHADFLRVDAKVA 103
Query: 147 LKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+KV VP+ F E C G+K +GG ++ + T L+ LC I IEVD+ N+ D + +
Sbjct: 104 IKVSVPLHFINEEKCHGVKIEGGIIEHMLTELEVLCLPGLIPEYIEVDMENVTTADILHI 163
Query: 206 SDIE----VHPSWKLLSKNEKMPLCKISATK 232
SD++ V + L ++ M + +SA +
Sbjct: 164 SDLKLPEGVVSTALELGEDHDMAVTTVSAKR 194
>gi|383786543|ref|YP_005471112.1| 50S ribosomal protein L25 [Fervidobacterium pennivorans DSM 9078]
gi|383109390|gb|AFG34993.1| ribosomal protein L25, Ctc-form [Fervidobacterium pennivorans DSM
9078]
Length = 219
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 85/191 (44%), Gaps = 19/191 (9%)
Query: 27 HTIQAIPRECTGS-RVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
H + A R G R R R+QG IPA+ + L + L+ E+
Sbjct: 3 HVVNAQLRSIVGKKRAVRRLRAQGVIPAIAYGPGL----------EKPVSLALEKNSFLK 52
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ K V ST L ++ +G VL + V D+ T + ++ F +
Sbjct: 53 LFKEVT----ESTPLTLVVKDENGKEVLKHMAFIK--MVQYDKVTDEVRHVDFYIPEAHH 106
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
++K++VP+ G G++KGG L+ I + + I IE+DV++LD+GD + +
Sbjct: 107 KMKINVPLHIVG--KAIGVEKGGILEVIHHEVVVEALPDRIPETIEIDVTSLDLGDSLRV 164
Query: 206 SDIEVHPSWKL 216
D+++ K+
Sbjct: 165 KDVKLPEGVKI 175
>gi|422736220|ref|ZP_16792484.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1341]
gi|315166971|gb|EFU10988.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1341]
Length = 202
Score = 50.1 bits (118), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 92/192 (47%), Gaps = 39/192 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILST----ERKQIHSILKSVELPFFCSTTFP 101
R +G++PA+V+ QI ST E K + IL+ +T
Sbjct: 22 RHEGKVPAIVYGY---------------QIESTPIYFEEKDLSKILRE----HGANTVIK 62
Query: 102 LQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD--DGTELKVDVPVVFKGVE 159
+ + G S+ L K D TG++L++ F+ + + TE++ +V ++ +
Sbjct: 63 MTV---DGKSI-----NTLMSKAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--- 111
Query: 160 SCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
G+K GG L +++ T L P + + IEVD++NL+IGD + ++D+ H +++L+
Sbjct: 112 -SAGVKAGGTLAQNLYTVLVAATP-DKLPESIEVDITNLEIGDALTIADLPEHKDYEILT 169
Query: 219 KNEKMPLCKISA 230
E+ + + A
Sbjct: 170 DPEEQLVAIVEA 181
>gi|213967230|ref|ZP_03395379.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. tomato T1]
gi|301381034|ref|ZP_07229452.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. tomato Max13]
gi|302060384|ref|ZP_07251925.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. tomato K40]
gi|302134874|ref|ZP_07260864.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. tomato NCPPB 1108]
gi|213928072|gb|EEB61618.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. tomato T1]
Length = 203
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++ + ++L E H I
Sbjct: 5 TLNAELRSDLGKGASRRLRRLASLVPAVVYGGDKAPESISMPAKEVAKLLENEASYSHII 64
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+V G+ +V++ + + R G +L+ FV G +
Sbjct: 65 ELNV---------------GGTKQNVIIKA-------LQRHPAKGHVLHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E P +KKGG + + + L+ C + + IEVDVS L+IG V +S
Sbjct: 103 LTAIVPVHFIG-EEAP-IKKGGEVSHVTSELEVSCLPKDLPEFIEVDVSALEIGSIVHLS 160
Query: 207 DIE 209
D++
Sbjct: 161 DVK 163
>gi|239618100|ref|YP_002941422.1| 50S ribosomal protein L25/general stress protein Ctc [Kosmotoga
olearia TBF 19.5.1]
gi|239506931|gb|ACR80418.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Kosmotoga
olearia TBF 19.5.1]
Length = 215
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 87/207 (42%), Gaps = 52/207 (25%)
Query: 32 IPRECTGSRVSARDR-SQGRIPAVVFAQDL--LDKNTDRRSPSR--KQILST-------- 78
+P E + V A+D G+IPAVV+ D+ + D+ R I+ T
Sbjct: 6 LPAEKRDTSVKAKDLLKNGKIPAVVYGPDVESFPISVDKVEVMRHINHIVETTPIVFEIE 65
Query: 79 ---ERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILN 135
E+K+ H LK+V+ RD + I++
Sbjct: 66 ENGEKKEYHGFLKAVQ----------------------------------RDRVSDAIIH 91
Query: 136 LVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVS 195
+ F G ++++ +P+ F G G++KGG L+ I T L I +EV++
Sbjct: 92 MDFYIPAKGHKMEIHIPIHFIG--KAKGVEKGGILEHIITHLPVETLPSTIVEALEVNIE 149
Query: 196 NLDIGDRVFMSDIEVHPSWKLLSKNEK 222
+LD+GD + + DI + K+L+ E+
Sbjct: 150 HLDLGDVLRVKDIPLPEGMKVLADPEE 176
>gi|86140922|ref|ZP_01059481.1| putative ribosomal L25p family stress protein [Leeuwenhoekiella
blandensis MED217]
gi|85832864|gb|EAQ51313.1| putative ribosomal L25p family stress protein [Leeuwenhoekiella
blandensis MED217]
Length = 209
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI RE G + + R+ G +P V++ D P K +
Sbjct: 5 TITGSKRESVGKKATKALRNAGEVPCVLYGGD---------EPVHFNAPEIAFKDL---- 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
V P + T L G+ +L + P+ T RIL++ F +G E+
Sbjct: 52 --VYTPDAHTATLELD---GNTYMAILQDIQFHPV-------TDRILHIDFYQIFEGKEV 99
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ +PV ++G + G++ GG L+ +L+ +++ + D++ L IGD+++++
Sbjct: 100 TMTIPVHYEG--NSRGVRNGGVLRKTYRTLRVKALPKNLPDYVVADITKLKIGDKLYITG 157
Query: 208 IEVHPSWKLLSKNEKMPLCKISATK 232
IE WK L + + +C++ ++
Sbjct: 158 IE-QGEWKYLHPDNTV-VCQVRTSR 180
>gi|415906029|ref|ZP_11552650.1| 50S ribosomal subunit protein L25 [Herbaspirillum frisingense
GSF30]
gi|407763203|gb|EKF71905.1| 50S ribosomal subunit protein L25 [Herbaspirillum frisingense
GSF30]
Length = 202
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A PR G+ S R R G+ P +V+ N ++ + ++ LK
Sbjct: 5 AFPRNEQGTGASRRLRRAGQTPGIVYGGTAAPLN-----------IAVDHNALYHALKK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F S+ L+I G VLL +V K +L++ F D +L
Sbjct: 53 --ETFHSSILDLEID-GKVEQVLLRDFQVHAFK-------QLVLHVDFQRVDASQKLHTK 102
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F E P +K G + + L C +++ IEVD+S LD+G + ++D++
Sbjct: 103 VPLHFVNAEVSPAVKLHAGIISHVAAELDVTCLPKNLPEFIEVDLSKLDVGQSIHLADLK 162
Query: 210 V 210
+
Sbjct: 163 L 163
>gi|224373133|ref|YP_002607505.1| 50S ribosomal protein L25/general stress protein Ctc [Nautilia
profundicola AmH]
gi|254801057|sp|B9LA47.1|RL25_NAUPA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|223589444|gb|ACM93180.1| ribosomal protein L25, Ctc-form [Nautilia profundicola AmH]
Length = 178
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 130 TGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPK 189
TG +L++ + A DG + VP+ KG + GLK G L R +K E++
Sbjct: 79 TGELLHVDLLMAQDGVKSYYHVPIKVKG--TPIGLKNKGVLIYHRRRIKVKAAPENLPDF 136
Query: 190 IEVDVSNLDIGDRVFMSDIEV 210
E+DV+NLD+GD + + DIE+
Sbjct: 137 FELDVTNLDVGDNILIRDIEM 157
>gi|406923716|gb|EKD60745.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 196
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 21/180 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R TG + + R G +P +V+ D +P +I +++LK
Sbjct: 8 LHAEARTGTGKGAARQSRRDGFVPGIVYG--------DNTAPQPIKI------PYNALLK 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F S+ F L++ V+ + V RD ++ + D +
Sbjct: 54 RLKAGRFLSSLFNLKVEGQPDVHVICRA-------VQRDVVKDLPTHIDLMRLHDENRIN 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ + V F E+ PGLKKGG L +R ++ A I + VD++ IGD + ++DI
Sbjct: 107 LFIHVTFINHEASPGLKKGGTLTVVRNDVELNVLAGDIPDHVTVDLTGTKIGDVIHINDI 166
>gi|119944671|ref|YP_942351.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Psychromonas
ingrahamii 37]
gi|226736354|sp|A1STD7.1|RL25_PSYIN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|119863275|gb|ABM02752.1| LSU ribosomal protein L25P [Psychromonas ingrahamii 37]
Length = 203
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 87/208 (41%), Gaps = 26/208 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G S R R +PA+V+ D K + + K I+ E
Sbjct: 5 LTATTRTDLGKGASRRLRHADLVPAIVYGAD---KEAVSLTFTHKDIIKAEG-------- 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F S+ L+I S VL D + R RI +L + D +L
Sbjct: 54 ---IEAFYSSVLDLEIDGVSEQVVLKD--------LQRHAFKARIQHLDLLRVDAKHKLH 102
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VP+ F +K GG + ++ LC + + IEVD+S ++IGD + +S+I
Sbjct: 103 TTVPLHFINEGLSEAIKNGGIVYRTINEVEVLCLPKDLPSFIEVDISTMEIGDTLHLSNI 162
Query: 209 EVHPSWKL--LSKNEK--MPLCKISATK 232
+ + L+K E+ +P+ I+ +K
Sbjct: 163 TLPAGVESVELNKGEEHDLPMVSIALSK 190
>gi|319405260|emb|CBI78871.1| 50S ribosomal protein L25 [Bartonella sp. AR 15-3]
Length = 205
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 34/190 (17%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T +A RE G S + R G IPAV++ D++ P +S K I
Sbjct: 5 YTFKAEIREQVGKGSSRKLRRNGFIPAVIYG--------DKQPPLA---ISVPYKDI--- 50
Query: 87 LKSVELPFFCSTTFPLQIRAG----SGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVW 140
F+ +I AG + +++ +D K VLP D +++ F+
Sbjct: 51 -------FY-------KIHAGGFRTTVATIEIDQQKIQVLPKDYQLDPVRDFPIHVDFLR 96
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
+ + V +PV F ++ PG+K+GG L +R ++ A I IE+D+S+ IG
Sbjct: 97 ISAKSVVHVHIPVHFLNEDTAPGIKRGGILNIVRHEIECTALAHAIPEAIEIDLSSYSIG 156
Query: 201 DRVFMSDIEV 210
D + +S +++
Sbjct: 157 DSIHISAVQL 166
>gi|148260671|ref|YP_001234798.1| 50S ribosomal protein L25/general stress protein Ctc [Acidiphilium
cryptum JF-5]
gi|326403865|ref|YP_004283947.1| 50S ribosomal protein L25 [Acidiphilium multivorum AIU301]
gi|338980520|ref|ZP_08631790.1| 50S ribosomal protein L25 [Acidiphilium sp. PM]
gi|166223656|sp|A5FZ47.1|RL25_ACICJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|146402352|gb|ABQ30879.1| LSU ribosomal protein L25P [Acidiphilium cryptum JF-5]
gi|325050727|dbj|BAJ81065.1| 50S ribosomal protein L25 [Acidiphilium multivorum AIU301]
gi|338208553|gb|EGO96402.1| 50S ribosomal protein L25 [Acidiphilium sp. PM]
Length = 217
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 88/186 (47%), Gaps = 22/186 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
+ + TI A R G V+ R G++PAV++ ++ P+ +++ + +
Sbjct: 2 AKFETIAAEDRARAGKGVARATRRAGKVPAVIYGA--------KQEPT---LIALDPR-- 48
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
+L+ ++ + S + ++ +G +++ D I++H T + ++ F
Sbjct: 49 -IVLREMKRGGWRSRLYEIETASGKARALMRD------IQLH--PVTDQPEHVDFQRLAA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G ++V V V F G+K+GG L +R +++ LC +HI E D+ LDI D +
Sbjct: 100 GEPVRVAVNVNFLNELISVGMKRGGVLNVVRHAVEVLCDPDHIPDHFEADLGPLDINDNI 159
Query: 204 FMSDIE 209
SD++
Sbjct: 160 RWSDLK 165
>gi|390956456|ref|YP_006420213.1| 50S ribosomal protein L25 [Terriglobus roseus DSM 18391]
gi|390411374|gb|AFL86878.1| ribosomal protein L25, Ctc-form [Terriglobus roseus DSM 18391]
Length = 223
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 80/177 (45%), Gaps = 24/177 (13%)
Query: 44 RDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQ 103
R R G IPAV++ + Q ++ + K I IL S +T F L
Sbjct: 24 RVRVSGLIPAVIYGAGI-----------ESQAITVDPKSILKILHS---ESGHNTIFDLN 69
Query: 104 IRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPG 163
I G+G+ ++ + PIK G++L++ +KV VPV+ G+ G
Sbjct: 70 IENGAGAKAMIVDWQYEPIK-------GKLLHIDLKRIAMDKTMKVSVPVMLSGIPV--G 120
Query: 164 LK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSK 219
+K GG L + ++ C I I++DV+NL++ + +SD+ S K L++
Sbjct: 121 VKMGGGVLDQVLREIEVECFPGDIPSHIDIDVTNLELHGAIHVSDLPHTGSVKFLAE 177
>gi|149378000|ref|ZP_01895725.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
algicola DG893]
gi|149357709|gb|EDM46206.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Marinobacter
algicola DG893]
Length = 217
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 84/186 (45%), Gaps = 28/186 (15%)
Query: 29 IQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
I+A PR G S R R + R IPA+++ ++ + I E K
Sbjct: 7 IEAFPRGDQGRGASRRLRREERKIPAIIYG--------GKKEATAISIWHNELK------ 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGT 145
K++E F S +++ S +L D + P+ H D F+ D
Sbjct: 53 KALENEAFFSHILTIELEGKKESVILKDLQRHPYKPLLTHAD----------FLRVDKDH 102
Query: 146 ELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
E+ V+VP+ F ES P +K +GG ++ +C +++ +EVD++++++ V
Sbjct: 103 EIHVNVPLHFLNEESAPAIKLQGGVANHQINEVEVICLPQNLPEFLEVDMTSVEMDQVVH 162
Query: 205 MSDIEV 210
+SD+++
Sbjct: 163 LSDLKL 168
>gi|82701724|ref|YP_411290.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosospira
multiformis ATCC 25196]
gi|109893371|sp|Q2YBH3.1|RL25_NITMU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|82409789|gb|ABB73898.1| LSU ribosomal protein L25P [Nitrosospira multiformis ATCC 25196]
Length = 228
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 25/204 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A RE G S R R G++P +++ + +P+ Q + + ++ LK
Sbjct: 5 ISAEKRELQGKGASRRLRGSGKVPGIIYGGE---------NPA--QPIELDHNNLYHQLK 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
L F ++ + + G VLL ++ P K ++L++ F ++
Sbjct: 54 ---LEAFHASILTMSVE-GQKEKVLLRDIQMHPFKP-------QVLHIDFQRVASNKKIH 102
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VP+ F + PG+K GG + + T L C + + I VDV L G+ + +S+
Sbjct: 103 MKVPLHFINEDIAPGVKLAGGLVSHVLTELDVSCLPKDLPEFISVDVGELAAGNTIHLSN 162
Query: 208 IEVHPSWKL--LSKNEKMPLCKIS 229
+++ ++ L K E +P+ I+
Sbjct: 163 LQLPEGVEIPALMKGEDLPVATIA 186
>gi|407979091|ref|ZP_11159913.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp.
HYC-10]
gi|407414307|gb|EKF35960.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp.
HYC-10]
Length = 208
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 95/230 (41%), Gaps = 53/230 (23%)
Query: 14 NSRTPFSRTTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRK 73
N RT F R+T +Q I R G +P V++ KNTD + S
Sbjct: 7 NKRTDFKRST-----LQKI-------------RHSGHVPGVIYG-----KNTDNLAVSLD 43
Query: 74 QI--LSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDE 128
I L T R + + + ++++ G SV++ + P+K VH D
Sbjct: 44 SIDLLKTLRDEGKNTIITLDV-------------GGETKSVMVTELQTDPLKNELVHAD- 89
Query: 129 ETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISP 188
F D E++ DVPV G G+K GG L+ L + I
Sbjct: 90 ---------FQVVDLQQEIEADVPVQLIG--ESKGVKDGGVLQQPLFELSITAKPKDIPQ 138
Query: 189 KIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPEP 238
IE D++NL++ D + + D+ V ++++ + E++ + + + PEP
Sbjct: 139 NIEADITNLEVNDVLTVGDLPVQSTYQINNNPEEVVASILPPQQSKVPEP 188
>gi|443319672|ref|ZP_21048850.1| ribosomal protein L25, Ctc-form [Gloeocapsa sp. PCC 73106]
gi|442790616|gb|ELS00172.1| ribosomal protein L25, Ctc-form [Gloeocapsa sp. PCC 73106]
Length = 185
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 51/87 (58%)
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
T+ ++D+ V + + G+K+GG L+ + T LK C A+ I I+VD+++LDIG +
Sbjct: 97 ATQGRLDITVPIRLIGEAFGVKQGGVLEQLVTELKVQCLADKIPESIDVDMTDLDIGAVI 156
Query: 204 FMSDIEVHPSWKLLSKNEKMPLCKISA 230
+ ++ + ++ + +K+ L +SA
Sbjct: 157 HVHELNISEGVTVMDEPDKIVLTIVSA 183
>gi|357032397|ref|ZP_09094336.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconobacter
morbifer G707]
gi|356414169|gb|EHH67817.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconobacter
morbifer G707]
Length = 185
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+LK + + S + LQ+ +G L+ ++ P+ T L++ F G
Sbjct: 19 VLKELHRGGWSSRVYNLQVESGEPVPALIRDVQLHPV-------TDAPLHVDFQRVAAGH 71
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
++ V V + F G E PG+K+GG L +R S+ I VD+S LDI D V
Sbjct: 72 KVHVQVAIAFTGEEQAPGIKRGGVLNVVRHSVDVEVDPVSIPEHFTVDLSALDIHDSVRW 131
Query: 206 SDIE 209
D++
Sbjct: 132 EDLK 135
>gi|421096708|ref|ZP_15557407.1| ribosomal protein L25, Ctc-form [Leptospira borgpetersenii str.
200901122]
gi|410799953|gb|EKS02014.1| ribosomal protein L25, Ctc-form [Leptospira borgpetersenii str.
200901122]
Length = 212
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 82/191 (42%), Gaps = 24/191 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I R TG + R RS G IP + + + + K++ K +HS
Sbjct: 7 HKIAVKKRTETGKNENNRLRSSGMIPVNIIGAGVATSG----AVNEKEL----EKMVHSG 58
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
++ ST L + G G KV ++ R E GRI ++ F G +
Sbjct: 59 IRQ-------STLIELDVE-GQGQQ------KVFVKEIQRFPEIGRIRHVDFYKVVPGKK 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ + + GV G K GG + I L+ E + + +DV++LD+GD + +S
Sbjct: 105 IVTKIGIETTGV--AKGSKTGGQFEHIIHELRVKTIPEDLLENLTIDVTDLDVGDSIKIS 162
Query: 207 DIEVHPSWKLL 217
++V SW++L
Sbjct: 163 QLKVPTSWEIL 173
>gi|395650296|ref|ZP_10438146.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
extremaustralis 14-3 substr. 14-3b]
Length = 199
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 75/159 (47%), Gaps = 24/159 (15%)
Query: 51 IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGS 110
+PAVV+ D ++P +L+ E I K +E S L + G+
Sbjct: 29 VPAVVYGGD--------KAPESISMLAKE------IAKLLENDAAYSHIISLNV-GGTKQ 73
Query: 111 SVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYL 170
+V++ + + R G +L+ FV G +L VPV F G E P +KKGG +
Sbjct: 74 NVIIKA-------LQRHPAKGHVLHADFVRVVAGQKLTAIVPVHFVG-EEAP-VKKGGEV 124
Query: 171 KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
+ ++ C + + IEVD+S ++IGD + +SDI+
Sbjct: 125 SHVVAEIEVTCLPKDLPEFIEVDLSAMEIGDIIHLSDIK 163
>gi|424760920|ref|ZP_18188508.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis R508]
gi|402402641|gb|EJV35344.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis R508]
Length = 201
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 39/192 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILST----ERKQIHSILKSVELPFFCSTTFP 101
R +G++PA+V+ QI ST E K + IL+ +T
Sbjct: 22 RHEGKVPAIVYGY---------------QIESTPIYFEEKDLSKILRE----HGANTVIK 62
Query: 102 LQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD--DGTELKVDVPVVFKGVE 159
+ + G + L+ K D TG++L++ F+ + + TE++ +V ++ +
Sbjct: 63 MTVD-GKNINTLMS-------KAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--- 111
Query: 160 SCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
G+K GG L +++ T L P + + IEVD++NL+IGD + ++D+ H +++L+
Sbjct: 112 -SAGVKAGGTLAQNLYTVLVAATP-DKLPESIEVDITNLEIGDALTIADLPEHKDYEILT 169
Query: 219 KNEKMPLCKISA 230
E+ + + A
Sbjct: 170 DPEEQLVAIVEA 181
>gi|365873582|ref|ZP_09413115.1| ribosomal protein L25, Ctc-form [Thermanaerovibrio velox DSM 12556]
gi|363983669|gb|EHM09876.1| ribosomal protein L25, Ctc-form [Thermanaerovibrio velox DSM 12556]
Length = 214
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 83/190 (43%), Gaps = 23/190 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+Q RE G + RS+G IPAVV+ S K++ +
Sbjct: 7 VQFHDREGLGKGACRKLRSKGMIPAVVYGPSYEGGKAGYVSA----------KEVQPVCA 56
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
S + +T L I G+ L+ + P+ RD +++L F+ +++
Sbjct: 57 S---ESWETTVIELAI-GGNQEMALIKEIQRHPLS--RD-----LVHLDFLQMVKDHKVR 105
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V +PV G + C G+K+GG L+ L E I ++++DV +L++G V +SD+
Sbjct: 106 VQIPVHLHGKDVCAGVKQGGILEQYHYELVAEVFPEDIPERVDIDVRSLEMGKEVRISDL 165
Query: 209 EVHPS--WKL 216
E P W L
Sbjct: 166 EFGPKVHWVL 175
>gi|88704033|ref|ZP_01101748.1| 50S ribosomal subunit protein L25 [Congregibacter litoralis KT71]
gi|88701860|gb|EAQ98964.1| 50S ribosomal subunit protein L25 [Congregibacter litoralis KT71]
Length = 221
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 92/211 (43%), Gaps = 28/211 (13%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
I A R G S R RS IPA+++ + P+ L+ RK +
Sbjct: 6 AIAATVRSDLGKGASRRLRRSVDHIPAIIYGA--------GKDPAP---LTIVRKDLE-- 52
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K++E F S + + ++L D + R +++ F+ D
Sbjct: 53 -KALENEAFYSQVIDVSVDGDVQPAILKD--------LQRHPARNDVMHADFLRVDAKVA 103
Query: 147 LKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+KV++P+ F E C G+K +GG ++ + T L+ LC I IEVD+ N+ D + +
Sbjct: 104 IKVNIPLHFINEEKCHGVKIEGGIIEHLLTELEVLCLPGLIPEYIEVDMENVTTADIIHI 163
Query: 206 SDIE----VHPSWKLLSKNEKMPLCKISATK 232
SD++ V + L ++ M + +SA +
Sbjct: 164 SDLKLPEGVVSTALELGEDHDMAVTSVSAKR 194
>gi|294678566|ref|YP_003579181.1| 50S ribosomal protein L25 [Rhodobacter capsulatus SB 1003]
gi|294477386|gb|ADE86774.1| 50S ribosomal protein L25 [Rhodobacter capsulatus SB 1003]
Length = 199
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R TG + R +G++P +V+ D + P + + +L
Sbjct: 7 TLVAEVRTGTGKGAARAARREGKVPGIVYG--------DGKEPLAINL------DYNKLL 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ F ST F L I D +V+ V +D ++ F+ + +
Sbjct: 53 TRLRKGRFLSTLFNLHIEG-------QDDVRVICRGVQKDVVKDLPTHIDFMRTHRASRI 105
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ + V F E+ PGLK+GG L +R ++ A I I VD++ +IGD + ++D
Sbjct: 106 NLFIHVNFDNAEASPGLKRGGTLTIVRPEVELEVLAGDIPDHITVDLTGRNIGDVIHIND 165
Query: 208 I 208
I
Sbjct: 166 I 166
>gi|188591108|ref|YP_001795708.1| 50S ribosomal protein l25/general stress protein ctc [Cupriavidus
taiwanensis LMG 19424]
gi|226736303|sp|B2AGT7.1|RL25_CUPTR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|170938002|emb|CAP62986.1| 5S rRNA binding 50S RIBOSOMAL SUBUNIT PROTEIN L25 [Cupriavidus
taiwanensis LMG 19424]
Length = 205
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 23/197 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ P +++ + K I H++ K
Sbjct: 3 VVAFERSVQGTGASRRLRNSGKTPGIIYGG----------AAEPKMIELDHNALWHALKK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ L++ AG LL + ++ P K +L++ F ++
Sbjct: 53 EA----FHSSILDLEV-AGKSEKALLRAFQMHPFKP-------LVLHVDFQRVSANDKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I L+ C + IEVDV +++G + +SD
Sbjct: 101 VKVPLHFMNQETAPGVKLGHGLVNHIVNDLEVSCLPADLPEFIEVDVGAMELGQTLHLSD 160
Query: 208 IEVHPSWKLLSKNEKMP 224
+++ +++ + P
Sbjct: 161 LKLPKGVTVITHGDDNP 177
>gi|134297987|ref|YP_001111483.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum reducens MI-1]
gi|172044207|sp|A4J0Q5.1|RL25_DESRM RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|134050687|gb|ABO48658.1| LSU ribosomal protein L25P [Desulfotomaculum reducens MI-1]
Length = 210
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 90/194 (46%), Gaps = 27/194 (13%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R+ G IP VV+ + + +S + K + +IL SV +T + I
Sbjct: 23 RNNGGIPGVVYGKHV-----------GSMAISVDAKDLKNILGSVT---GRNTLINMNIN 68
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
GS +V++ S ++ P+ H++ I ++ F + T+++ +PV G + G+
Sbjct: 69 -GSKQTVMVKSLQMDPM--HQN-----IRHVDFQQVSENTKIRTVIPVQLVG--TPKGVA 118
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPL 225
GG ++ S + C I I+VD+S L+IGD + +SD+ + P K+L
Sbjct: 119 MGGVIQHDLRSAEIECLPNRIPEAIQVDISGLEIGDTLSVSDLNLPPGVKILDHPHT--- 175
Query: 226 CKISATKLENPEPA 239
+ ++ PEPA
Sbjct: 176 TVVGLATIKAPEPA 189
>gi|152980425|ref|YP_001354819.1| 50S ribosomal protein L25 [Janthinobacterium sp. Marseille]
gi|166223690|sp|A6T2S2.1|RL25_JANMA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|151280502|gb|ABR88912.1| large subunit ribosomal protein L25 [Janthinobacterium sp.
Marseille]
Length = 214
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R+ G+ S R R G P +V+ N +S + ++ LK
Sbjct: 5 AFARKELGTGASRRQRIAGLTPGIVYGGTAAPVN-----------ISLDHNALYHALKK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F S+ L++ G VLL +VH ++ +L+ F D ++ V
Sbjct: 53 --EAFHSSILDLEVD-GKVEQVLLRD-----FQVHAYKQL--VLHADFQRVDAKQKIHVK 102
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F E+ P +K GG + + + L C + +EVD++NLD+G + ++DI+
Sbjct: 103 VPLHFVNAETSPAVKLHGGIISHVASELDITCLPSDLPEFVEVDLANLDVGHSIHLADIK 162
Query: 210 V 210
+
Sbjct: 163 L 163
>gi|332298401|ref|YP_004440323.1| 50S ribosomal protein L25 [Treponema brennaborense DSM 12168]
gi|332181504|gb|AEE17192.1| 50S ribosomal protein L25 [Treponema brennaborense DSM 12168]
Length = 185
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 89/202 (44%), Gaps = 25/202 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A+ R TG RV+ + R GR+PAV++ S +L + + + K
Sbjct: 6 VNAVTRTETGKRVAKKLRENGRLPAVMY-----------NSKGEAVMLDIDEVEFTKVWK 54
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
S +T L++ S + V + D +T R L+ F D+ LK
Sbjct: 55 SAT----PTTLVNLKLDGKSDNLVFIKD-------TEYDIKTDRNLHADFHAIDEKKALK 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V + V+ G + G+++GG+L + ++ + C +++ ++ D+S L +G + D+
Sbjct: 104 VTMKVLLSG--NPAGVREGGFLTTHQSQITIQCLPKNLPIRVTADISGLGVGQVFRVKDL 161
Query: 209 EVHPSWKLLSKNEKMPLCKISA 230
+ +LS E L +SA
Sbjct: 162 GLAKEITVLSDPE-AALASVSA 182
>gi|393198758|ref|YP_006460600.1| 50S ribosomal protein L25 [Solibacillus silvestris StLB046]
gi|406667826|ref|ZP_11075578.1| 50S ribosomal protein L25 [Bacillus isronensis B3W22]
gi|327438089|dbj|BAK14454.1| ribosomal protein L25 [Solibacillus silvestris StLB046]
gi|405384341|gb|EKB43788.1| 50S ribosomal protein L25 [Bacillus isronensis B3W22]
Length = 217
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/201 (20%), Positives = 93/201 (46%), Gaps = 25/201 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+QA RE + ++ R++G++ V++ + +P +S + + ++
Sbjct: 5 LQATKRETGKRSILSQLRNEGQLAGVLYGYET------ETTP-----ISLDYRDTAKAVQ 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ + ++ F +++ ++VL D + RD G + ++ F+ + EL+
Sbjct: 54 T----YGTTSVFKIEVGGKRVNAVLTD--------IQRDALKGHVKHVDFLAINMKEELE 101
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VDVP+ F G + G+K+GG + +LK I IE+DVS+L +G+ + + ++
Sbjct: 102 VDVPIAFIG--TSVGVKEGGVITQPNHTLKIKVNPSKIPDTIEIDVSDLAVGESLSVGNV 159
Query: 209 EVHPSWKLLSKNEKMPLCKIS 229
+ + N+ L ++
Sbjct: 160 RDQFTAFTIVDNDDYTLATVT 180
>gi|291286406|ref|YP_003503222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Denitrovibrio
acetiphilus DSM 12809]
gi|290883566|gb|ADD67266.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Denitrovibrio
acetiphilus DSM 12809]
Length = 207
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%)
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
++D+ V F V GLK GG L + TS+K +I KI VD+S L+IGD + +SD
Sbjct: 100 EIDIDVHFDFVGEPAGLKMGGILNTGHTSVKIRTLPRNIPEKITVDISGLNIGDSIHISD 159
Query: 208 IEVHPSWKLLSKNE 221
I+ LL E
Sbjct: 160 IKFSEEHTLLEPTE 173
>gi|149203915|ref|ZP_01880883.1| ribosomal protein L25 [Roseovarius sp. TM1035]
gi|149142357|gb|EDM30402.1| ribosomal protein L25 [Roseovarius sp. TM1035]
Length = 208
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 89/210 (42%), Gaps = 36/210 (17%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+QA R TG + R G +P VVF D + P I +++LK
Sbjct: 8 LQAQERAGTGKGAARAARRAGMVPGVVFGGD--------KEPLAINI------PFNALLK 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLL-----DSGKVLP--IKVHRDEETGRILNLVFVWA 141
++ F ST F LQ+ V+ D K LP + + R T RI NL F+
Sbjct: 54 RLKKGRFKSTLFNLQVEGHDDVRVICRDVQRDVVKDLPTHVDLMRLRRTTRI-NL-FIHV 111
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLD-IG 200
D F E C L+KGG L +R ++ A I + VD+S ++ IG
Sbjct: 112 D------------FINAEQCKALRKGGVLTVVRPEVELNVLAGDIPDHVTVDLSKVEKIG 159
Query: 201 DRVFMSDIEVHPSWKLLSKNEKMPLCKISA 230
D V +S +++ + + K+ +C ISA
Sbjct: 160 DVVTISMVDLPAGSEPVIKDRDFVICNISA 189
>gi|422417696|ref|ZP_16494651.1| ribosomal protein L25, Ctc-form [Listeria seeligeri FSL N1-067]
gi|422420801|ref|ZP_16497754.1| ribosomal protein L25, Ctc-form [Listeria seeligeri FSL S4-171]
gi|313635141|gb|EFS01467.1| ribosomal protein L25, Ctc-form [Listeria seeligeri FSL N1-067]
gi|313639814|gb|EFS04543.1| ribosomal protein L25, Ctc-form [Listeria seeligeri FSL S4-171]
Length = 207
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 91/224 (40%), Gaps = 39/224 (17%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQ-IHSI 86
T++ RE T R RS+G++P +++ S +S + + I ++
Sbjct: 4 TLEVQKRETTQHSEVTRLRSEGKVPGIIYGYK-----------SENVPVSVDSLELIKAV 52
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADD 143
+ F T G +VLL +V P+K VH D + D
Sbjct: 53 RDNGRNAVFAVTV------DGKKLNVLLHEYQVDPLKDTLVHVD----------LLAVDM 96
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
E++ DV VV G PG+K GG L+ I +K E + IE+D+S+L+IGD +
Sbjct: 97 NEEVETDVRVVLVG--DAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVL 154
Query: 204 FMSDIEVHPSW------KLLSKNEKMPLCKISATKLENPEPAVM 241
+D+ + + + P + T E PEP +
Sbjct: 155 TTNDLPENKDYVVQVEEEETVVTVSAPRAEEEPTTAEAPEPEAL 198
>gi|403386103|ref|ZP_10928160.1| 50S ribosomal protein L25 [Kurthia sp. JC30]
Length = 209
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 123 KVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCP 182
+V +D G++++L F+ EL+V+VP+ G + G+K+GG L+ LK
Sbjct: 76 EVQKDPVKGKLIHLDFLAVSMRQELEVEVPITVVG--TSVGVKEGGVLQQPIRELKVSAK 133
Query: 183 AEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISA 230
I IEVD++ L IGD + + ++ + +L+ +E + L +SA
Sbjct: 134 PNSIPETIEVDITALGIGDTLSVGEVRDKGDYTILNDDEDV-LVTVSA 180
>gi|83951141|ref|ZP_00959874.1| ribosomal protein L25 [Roseovarius nubinhibens ISM]
gi|83839040|gb|EAP78336.1| ribosomal protein L25 [Roseovarius nubinhibens ISM]
Length = 193
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 49/87 (56%), Gaps = 2/87 (2%)
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL-DIGDRV 203
T++ + +P+ F E CP +KKGG L ++R ++ + A I IEVD++ + +IGD +
Sbjct: 75 TKINLFIPLDFTNEEECPAIKKGGVLTTVRNEIELIVTAGDIPDAIEVDLTKIENIGDTI 134
Query: 204 FMSDIEVHPSWKLLSKNEKMPLCKISA 230
+S I++ P + +C +SA
Sbjct: 135 TISMIDL-PKGAKPTIERDFVICNVSA 160
>gi|422694244|ref|ZP_16752239.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4244]
gi|315148326|gb|EFT92342.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4244]
Length = 202
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 39/192 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILST----ERKQIHSILKSVELPFFCSTTFP 101
R +G++PA+V+ QI ST E K + IL+ +T
Sbjct: 22 RHEGKVPAIVYGY---------------QIESTPIYFEEKDLSKILRE----HGANTVIK 62
Query: 102 LQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD--DGTELKVDVPVVFKGVE 159
+ + G + L+ K D TG++L++ F+ + + TE++ +V ++ +
Sbjct: 63 MTVD-GKNINTLMS-------KAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--- 111
Query: 160 SCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
G+K GG L +++ T L P + + IEVD++NL+IGD + ++D+ H +++L+
Sbjct: 112 -SAGVKAGGTLAQNLYTVLVAATP-DKLPESIEVDITNLEIGDALTIADLPEHKDYEILT 169
Query: 219 KNEKMPLCKISA 230
E+ + + A
Sbjct: 170 DPEEQLVAIVEA 181
>gi|294101746|ref|YP_003553604.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Aminobacterium colombiense DSM 12261]
gi|293616726|gb|ADE56880.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Aminobacterium colombiense DSM 12261]
Length = 217
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 53/100 (53%)
Query: 124 VHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPA 183
+ R+ I+++ F+ G ++ V++PVV +G E C GLK GG ++ + ++
Sbjct: 82 IQRNLLNNEIIHIDFIQLLKGHKIAVNIPVVLEGREDCVGLKHGGIIEQLLYEVEIEVLP 141
Query: 184 EHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKM 223
I + +DVS L++G+ + D+ + S +L E++
Sbjct: 142 TEIPNSVSIDVSGLNVGEGFSVKDLALPKSADILVDLEEL 181
>gi|39995768|ref|NP_951719.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter
sulfurreducens PCA]
gi|409911212|ref|YP_006889677.1| 50S ribosomal protein L25 [Geobacter sulfurreducens KN400]
gi|71153144|sp|Q74FE7.1|RL25_GEOSL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|39982532|gb|AAR33992.1| ribosomal protein L25 [Geobacter sulfurreducens PCA]
gi|298504778|gb|ADI83501.1| ribosomal protein L25 [Geobacter sulfurreducens KN400]
Length = 194
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 24/204 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G V+ + R+Q +P VV+ + + + + ++ E ++S++
Sbjct: 11 REKNGKGVARKLRAQDVVPGVVYGKGIEPVSVKVAAKDLAATIAGE-GGLNSLIT----- 64
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+G GS L+ V+ + R+ G IL++ F ++KV VP+
Sbjct: 65 -----------LSGGGS---LNGNIVIVADMQRNPLKGDILHVDFHRISLDEKVKVHVPL 110
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
V G + G+K+GG L + SL C I I VDV+NL IG + +S++ +
Sbjct: 111 VMVG--TAAGVKEGGMLDVVTYSLDVECLPTAIPEAINVDVTNLAIGHSIHVSELVLPAG 168
Query: 214 WKLLSKNEKMPLCKISA-TKLENP 236
K+L+ E P+ I K E P
Sbjct: 169 IKVLNDPET-PIVSIHGKAKEEAP 191
>gi|444921653|ref|ZP_21241488.1| 50S ribosomal protein L25 [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507380|gb|ELV07557.1| 50S ribosomal protein L25 [Wohlfahrtiimonas chitiniclastica SH04]
Length = 204
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQ-IHSILKSVEL 92
R+ G S R R +G IPAVV+ + + + L+ R + ++S + +VE
Sbjct: 11 RQDMGKGASRRLRREGLIPAVVYGAG---QEAVSIVLNHNEALTVFRNEDVYSSIVTVE- 66
Query: 93 PFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVP 152
I S++L D V R + +L F+ G +LK VP
Sbjct: 67 -----------IDGKPESAILRD--------VQRHPYKPLLAHLDFLRVKAGEKLKSMVP 107
Query: 153 VVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
VV E G+K GG L T+++ C + + IE+D+ +L +G + ++D++
Sbjct: 108 VVLLNAEDAAGVKAGGVLTHALTAIEVECLPKDLPHAIEIDIIDLAVGAHITVADVKAPA 167
Query: 213 SWKLLSKNE 221
++L+ E
Sbjct: 168 GVEILTPAE 176
>gi|171910045|ref|ZP_02925515.1| 50S ribosomal protein L25/general stress protein Ctc
[Verrucomicrobium spinosum DSM 4136]
Length = 224
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 26/182 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+QA R G+ R R G IPAV++ + + + S + I+ E +IL
Sbjct: 7 LQAKVRTAEGTSAVKRLRKAGSIPAVIYGKKHSNAKVEVNSKTFTAII--EHSASDNILV 64
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVF--VWADDGTE 146
++++ G + L L +V D G IL++ F V AD+ +
Sbjct: 65 NLKID-------------GEANDAL-----ALVQEVQHDYLRGGILHVDFHAVAADE--D 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ VPVV G+E+ KKGG L+ + SL+ C + + I +DVS L++G+ +S
Sbjct: 105 IHAAVPVVLSGIEAAE--KKGGKLEFVLHSLEVHCLPKDLPESIALDVSYLNVGEATHVS 162
Query: 207 DI 208
++
Sbjct: 163 EL 164
>gi|410461744|ref|ZP_11315389.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
azotoformans LMG 9581]
gi|409925448|gb|EKN62661.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
azotoformans LMG 9581]
Length = 210
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 42/202 (20%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQD---------LLDKNTDRRSPSRKQILST 78
TI A RE R G+ PAVV+ +D LL+ R R I+
Sbjct: 3 TISAKKREDFRRSAITEIRQSGKFPAVVYGKDKPTAHIVVDLLEFRKTMRKSGRNGIIK- 61
Query: 79 ERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVF 138
LQ+ G SV+L ++ P+ G +++ F
Sbjct: 62 -----------------------LQVEDGRTESVMLHDVQMNPL-------NGEVVHADF 91
Query: 139 VWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLD 198
+ + E+ ++V V G G+K GG L+ + C +I KI++D+S +
Sbjct: 92 LVVNMSKEVDIEVTVNLVG--DAQGVKDGGTLQQPLYKVNVRCLPTNIPEKIDIDISAYN 149
Query: 199 IGDRVFMSDIEVHPSWKLLSKN 220
IGD + + DI+V +++L +
Sbjct: 150 IGDVITVGDIKVDGKYEVLDDD 171
>gi|148245095|ref|YP_001219789.1| 50S ribosomal protein L25 [Candidatus Vesicomyosocius okutanii HA]
gi|166223730|sp|A5CVE7.1|RL25_VESOH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|146326922|dbj|BAF62065.1| 50S ribosomal protein L25 [Candidatus Vesicomyosocius okutanii HA]
Length = 225
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 22/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A+ R G + R R +IPA+V+ + PS+ ++ + +I +L
Sbjct: 4 TINALTRNYQGKGANRRLRRNNKIPAIVYGTG--------KPPSK---ITLDIFEITHLL 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K+ E T+ I + +V++ + + P K I ++ F+ + +
Sbjct: 53 KNEE----TYTSVLNLIVNKNKEAVIIKNLQRHPAK-------NSITHIDFLRINLNQSI 101
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+P+ F G E ++ G L T+++ C ++ I VD+S+L IG+ + ++D
Sbjct: 102 ITSIPIQFNGEEDNKAMRLGAVLNQFMTAIEISCLPTNLPHSINVDISHLTIGEHINLTD 161
Query: 208 IEV 210
I +
Sbjct: 162 INI 164
>gi|428312219|ref|YP_007123196.1| 50S ribosomal protein L25 [Microcoleus sp. PCC 7113]
gi|428253831|gb|AFZ19790.1| LSU ribosomal protein L25P [Microcoleus sp. PCC 7113]
Length = 199
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIE 191
+I +L F L+V VP+ F G G+K GG L + T ++ C I I+
Sbjct: 88 QIYHLSFFSVASQDSLEVTVPLHFVG--QAAGIKSGGILDPVITEIQVQCAPGDIPESID 145
Query: 192 VDVSNLDIGDRVFMSDI 208
VDVSNL+IGD + + D+
Sbjct: 146 VDVSNLEIGDSLHVGDL 162
>gi|435852894|ref|YP_007314213.1| ribosomal protein L25, Ctc-form [Halobacteroides halobius DSM 5150]
gi|433669305|gb|AGB40120.1| ribosomal protein L25, Ctc-form [Halobacteroides halobius DSM 5150]
Length = 218
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 84/192 (43%), Gaps = 41/192 (21%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKS---V 90
RE TGS V+ R R G +P V++ +D R S S K K+++ ++ +
Sbjct: 11 REKTGSGVARRLRENGLVPGVLYGKD-------RESVSVK----LNEKKVNKVIGGNQII 59
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
+L TT P+ ++ V RD G NLV V D + +D
Sbjct: 60 DLELNDGTTQPVMVK-----------------DVQRDVIKG---NLVHV---DLHHISLD 96
Query: 151 VPVVFK-GVE---SCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
PV + VE G ++GG L+ + L+ C I K+ VDVS L IG + +
Sbjct: 97 EPVTIEVRVELDGPAAGQQEGGVLEQLLRKLEVECLPADIPDKVVVDVSELKIGQSLSVD 156
Query: 207 DIEVHPSWKLLS 218
DIE+ +++S
Sbjct: 157 DIELEDELEIVS 168
>gi|23097515|ref|NP_690981.1| 50S ribosomal protein L25 [Oceanobacillus iheyensis HTE831]
gi|71153156|sp|Q8EU33.1|RL25_OCEIH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|22775738|dbj|BAC12016.1| 50S ribosomal protein L25 [Oceanobacillus iheyensis HTE831]
Length = 215
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 85/189 (44%), Gaps = 25/189 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A RE + + R GR+PAVV+ + KN S ++ T R + + +
Sbjct: 5 LNATKREDLTKSATKQIRLSGRVPAVVYGKAKDPKNV---SVDSVDLVKTVRDEGRNAII 61
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
S LQ+ S V+L ++ PIK +L+ F + E+
Sbjct: 62 S------------LQVE-NSSVDVMLHDYQIDPIK-------DELLHADFYVVNMSEEMD 101
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V+V V G G K+GG L+ + +I +I +DVS+LD+GD V ++DI
Sbjct: 102 VNVAVRLDG--ETKGEKEGGVLQQPFYEILVRAKPNNIPEEIVIDVSDLDVGDSVSVADI 159
Query: 209 EVHPSWKLL 217
+V ++++L
Sbjct: 160 KVDGNYEIL 168
>gi|374368068|ref|ZP_09626123.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
basilensis OR16]
gi|373100399|gb|EHP41465.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
basilensis OR16]
Length = 198
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 23/197 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ P +++ + K I H++ K
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPGIIYGG----------AAEPKMIELDHNALFHALKK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ +++ G LL + ++ P K +L++ F ++
Sbjct: 53 EA----FHSSILDIEVE-GKAEKALLRAFQMHPFKP-------LVLHVDFQRVSATDKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I L+ C + IEVD+ N ++G + +SD
Sbjct: 101 VKVPLHFMNQENAPGVKLGHGIVNHIMNELEVSCLPADLPEFIEVDLGNAELGQTLHLSD 160
Query: 208 IEVHPSWKLLSKNEKMP 224
+++ ++ ++ P
Sbjct: 161 VKLPKGVSAITHGDENP 177
>gi|410089581|ref|ZP_11286195.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
viridiflava UASWS0038]
gi|409763116|gb|EKN48101.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
viridiflava UASWS0038]
Length = 204
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEQRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + AG +VL+ + + P K G +++ FV G +
Sbjct: 51 AKLLENEAAFSHVIELNV-AGKKQNVLIKALQRHPAK-------GHVMHADFVRVIAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VP+ F E P +KKGG + T L+ C + + IEVD+ L++GD V +S
Sbjct: 103 LTAIVPIHFIN-EEAP-VKKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLS 160
Query: 207 DIE 209
+++
Sbjct: 161 ELK 163
>gi|389843849|ref|YP_006345929.1| 50S ribosomal protein L25 [Mesotoga prima MesG1.Ag.4.2]
gi|387858595|gb|AFK06686.1| ribosomal protein L25, Ctc-form [Mesotoga prima MesG1.Ag.4.2]
Length = 214
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 87/206 (42%), Gaps = 47/206 (22%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDL------LDKN-----TDRRSPSRKQI 75
H I + G + +QG+IPAVV+ +L LDK +R + + +
Sbjct: 2 HEINLVAELRNGEMKARSLLNQGKIPAVVYGPELETVPVSLDKVEILRIMNRIAETTSVV 61
Query: 76 LSTERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILN 135
+S + K+ H+ LK V+ RD+ T +++
Sbjct: 62 ISIDGKEYHTFLKGVQ----------------------------------RDKVTDSVIH 87
Query: 136 LVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVS 195
L F G ++++ +P+ KG + G++KGG + I L + I +I VDVS
Sbjct: 88 LDFYVPSSGHKMELRIPIRLKG--TPIGVEKGGIVDHIINELPVSVLPKDIVEEIIVDVS 145
Query: 196 NLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ D+G + + D+E+ K L +E
Sbjct: 146 SFDVGHVLRVGDLEIPEGIKPLLDDE 171
>gi|375256573|ref|YP_005015740.1| 50S ribosomal protein L25 [Tannerella forsythia ATCC 43037]
gi|363408495|gb|AEW22181.1| ribosomal protein L25, Ctc-form [Tannerella forsythia ATCC 43037]
Length = 220
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 17/189 (8%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQD-LLDKNTDRRSPSRKQILSTERKQIHSIL 87
++ PRE G ++S R QG IPAV++ Q+ + T + + K + + K I +
Sbjct: 6 LKGTPRENLGKKMSKNLRKQGMIPAVLYGQEPVALPYTGKMNAGEKLVEIGDGKGIIVMD 65
Query: 88 KSVELP-----FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVF--VW 140
SV + + I G G V + + I+ H + IL+L F V+
Sbjct: 66 FSVSFDGVRKLIYTPEIHLVSIEMGDGRKV---NAILKEIQFHAVSDA--ILHLDFQEVF 120
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
AD E+ V V ++ V G+K GG L LK AE I K+ V+V +L++G
Sbjct: 121 ADKPIEMHVPVELIGHAV----GVKAGGKLTQAMRKLKVKGLAEQIPEKLTVNVDHLELG 176
Query: 201 DRVFMSDIE 209
+ + +++
Sbjct: 177 KTIKVGELQ 185
>gi|29375409|ref|NP_814563.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus
faecalis V583]
gi|227517790|ref|ZP_03947839.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus
faecalis TX0104]
gi|227554936|ref|ZP_03984983.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus
faecalis HH22]
gi|255973896|ref|ZP_05424482.1| ribosomal protein L25 [Enterococcus faecalis T2]
gi|256617695|ref|ZP_05474541.1| ribosomal protein L25 [Enterococcus faecalis ATCC 4200]
gi|256761581|ref|ZP_05502161.1| ribosomal protein L25 [Enterococcus faecalis T3]
gi|256957316|ref|ZP_05561487.1| ribosomal protein L25 [Enterococcus faecalis DS5]
gi|256959948|ref|ZP_05564119.1| 50S ribosomal protein L25 [Enterococcus faecalis Merz96]
gi|256964357|ref|ZP_05568528.1| 50S ribosomal protein L25 [Enterococcus faecalis HIP11704]
gi|257077688|ref|ZP_05572049.1| 50S ribosomal protein L25 [Enterococcus faecalis JH1]
gi|257081067|ref|ZP_05575428.1| 50S ribosomal protein L25 [Enterococcus faecalis E1Sol]
gi|257083739|ref|ZP_05578100.1| 50S ribosomal protein L25/general stress protein [Enterococcus
faecalis Fly1]
gi|257086164|ref|ZP_05580525.1| ribosomal protein L25 [Enterococcus faecalis D6]
gi|257089237|ref|ZP_05583598.1| 50S ribosomal protein L25 [Enterococcus faecalis CH188]
gi|257415387|ref|ZP_05592381.1| ribosomal protein L25 [Enterococcus faecalis ARO1/DG]
gi|257418421|ref|ZP_05595415.1| 50S ribosomal protein L25 [Enterococcus faecalis T11]
gi|293384300|ref|ZP_06630186.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis R712]
gi|293388464|ref|ZP_06632970.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis S613]
gi|294779202|ref|ZP_06744609.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis PC1.1]
gi|300859682|ref|ZP_07105770.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TUSoD Ef11]
gi|307270120|ref|ZP_07551438.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4248]
gi|307271421|ref|ZP_07552694.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0855]
gi|307284347|ref|ZP_07564512.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0860]
gi|312901641|ref|ZP_07760911.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0470]
gi|312905053|ref|ZP_07764178.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0635]
gi|312907105|ref|ZP_07766098.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 512]
gi|312979316|ref|ZP_07791014.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 516]
gi|397699210|ref|YP_006536998.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis D32]
gi|422690512|ref|ZP_16748566.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0630]
gi|422698770|ref|ZP_16756656.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1346]
gi|422700659|ref|ZP_16758502.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1342]
gi|422710558|ref|ZP_16767603.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0027]
gi|422713758|ref|ZP_16770507.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0309A]
gi|422716437|ref|ZP_16773143.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0309B]
gi|422721460|ref|ZP_16778049.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0017]
gi|422722352|ref|ZP_16778913.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2137]
gi|422727860|ref|ZP_16784281.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0012]
gi|422738937|ref|ZP_16794123.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2141]
gi|422867152|ref|ZP_16913753.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1467]
gi|424673735|ref|ZP_18110668.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis 599]
gi|424678080|ref|ZP_18114924.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV103]
gi|424681136|ref|ZP_18117930.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV116]
gi|424685641|ref|ZP_18122333.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV129]
gi|424686996|ref|ZP_18123651.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV25]
gi|424689655|ref|ZP_18126219.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV31]
gi|424698232|ref|ZP_18134530.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV41]
gi|424701372|ref|ZP_18137546.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV62]
gi|424702743|ref|ZP_18138887.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV63]
gi|424711860|ref|ZP_18144067.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV65]
gi|424717971|ref|ZP_18147241.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV68]
gi|424722436|ref|ZP_18151496.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV72]
gi|424723626|ref|ZP_18152584.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV73]
gi|424733083|ref|ZP_18161652.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV81]
gi|424746195|ref|ZP_18174444.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV85]
gi|424755211|ref|ZP_18183097.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV93]
gi|428766330|ref|YP_007152441.1| 50S ribosomal protein L25 [Enterococcus faecalis str. Symbioflor 1]
gi|68053202|sp|Q837L6.1|RL25_ENTFA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|29342869|gb|AAO80633.1| ribosomal protein L25 [Enterococcus faecalis V583]
gi|227074751|gb|EEI12714.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus
faecalis TX0104]
gi|227175932|gb|EEI56904.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus
faecalis HH22]
gi|255966768|gb|EET97390.1| ribosomal protein L25 [Enterococcus faecalis T2]
gi|256597222|gb|EEU16398.1| ribosomal protein L25 [Enterococcus faecalis ATCC 4200]
gi|256682832|gb|EEU22527.1| ribosomal protein L25 [Enterococcus faecalis T3]
gi|256947812|gb|EEU64444.1| ribosomal protein L25 [Enterococcus faecalis DS5]
gi|256950444|gb|EEU67076.1| 50S ribosomal protein L25 [Enterococcus faecalis Merz96]
gi|256954853|gb|EEU71485.1| 50S ribosomal protein L25 [Enterococcus faecalis HIP11704]
gi|256985718|gb|EEU73020.1| 50S ribosomal protein L25 [Enterococcus faecalis JH1]
gi|256989097|gb|EEU76399.1| 50S ribosomal protein L25 [Enterococcus faecalis E1Sol]
gi|256991769|gb|EEU79071.1| 50S ribosomal protein L25/general stress protein [Enterococcus
faecalis Fly1]
gi|256994194|gb|EEU81496.1| ribosomal protein L25 [Enterococcus faecalis D6]
gi|256998049|gb|EEU84569.1| 50S ribosomal protein L25 [Enterococcus faecalis CH188]
gi|257157215|gb|EEU87175.1| ribosomal protein L25 [Enterococcus faecalis ARO1/DG]
gi|257160249|gb|EEU90209.1| 50S ribosomal protein L25 [Enterococcus faecalis T11]
gi|291078373|gb|EFE15737.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis R712]
gi|291082154|gb|EFE19117.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis S613]
gi|294453713|gb|EFG22108.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis PC1.1]
gi|295113967|emb|CBL32604.1| LSU ribosomal protein L25P [Enterococcus sp. 7L76]
gi|300850500|gb|EFK78249.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TUSoD Ef11]
gi|306503287|gb|EFM72539.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0860]
gi|306511885|gb|EFM80882.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0855]
gi|306513555|gb|EFM82169.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4248]
gi|310626882|gb|EFQ10165.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 512]
gi|310631632|gb|EFQ14915.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0635]
gi|311287910|gb|EFQ66466.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis DAPTO 516]
gi|311291252|gb|EFQ69808.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0470]
gi|315027593|gb|EFT39525.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2137]
gi|315031326|gb|EFT43258.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0017]
gi|315035357|gb|EFT47289.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0027]
gi|315145201|gb|EFT89217.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2141]
gi|315151610|gb|EFT95626.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0012]
gi|315170844|gb|EFU14861.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1342]
gi|315172713|gb|EFU16730.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1346]
gi|315575275|gb|EFU87466.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0309B]
gi|315576567|gb|EFU88758.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0630]
gi|315581358|gb|EFU93549.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0309A]
gi|329577703|gb|EGG59130.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1467]
gi|397335849|gb|AFO43521.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis D32]
gi|402351983|gb|EJU86849.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV116]
gi|402352113|gb|EJU86973.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis 599]
gi|402352506|gb|EJU87355.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV103]
gi|402358216|gb|EJU92898.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV129]
gi|402366187|gb|EJV00584.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV25]
gi|402367104|gb|EJV01453.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV31]
gi|402371804|gb|EJV05950.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV62]
gi|402372994|gb|EJV07086.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV41]
gi|402382677|gb|EJV16328.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV65]
gi|402383225|gb|EJV16836.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV68]
gi|402386175|gb|EJV19682.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV63]
gi|402388750|gb|EJV22177.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV72]
gi|402392395|gb|EJV25657.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV81]
gi|402397557|gb|EJV30566.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV73]
gi|402397563|gb|EJV30571.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV85]
gi|402401174|gb|EJV33962.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV93]
gi|427184503|emb|CCO71727.1| 50S ribosomal protein L25 [Enterococcus faecalis str. Symbioflor 1]
Length = 202
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 39/192 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILST----ERKQIHSILKSVELPFFCSTTFP 101
R +G++PA+V+ QI ST E K + IL+ +T
Sbjct: 22 RHEGKVPAIVYGY---------------QIESTPIYFEEKDLSKILRE----HGANTVIK 62
Query: 102 LQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD--DGTELKVDVPVVFKGVE 159
+ + G + L+ K D TG++L++ F+ + + TE++ +V ++ +
Sbjct: 63 MTVD-GKNINTLMS-------KAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--- 111
Query: 160 SCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
G+K GG L +++ T L P + + IEVD++NL+IGD + ++D+ H +++L+
Sbjct: 112 -SAGVKAGGTLAQNLYTVLVAATP-DKLPESIEVDITNLEIGDALTIADLPEHKDYEILT 169
Query: 219 KNEKMPLCKISA 230
E+ + + A
Sbjct: 170 DPEEQLVAIVEA 181
>gi|363580294|ref|ZP_09313104.1| 50S ribosomal protein L25/general stress protein Ctc
[Flavobacteriaceae bacterium HQM9]
Length = 202
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 81/182 (44%), Gaps = 26/182 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A RE G + + R+ G +P VV+ D + T + K + + + +H+++
Sbjct: 5 TINASQRESLGKKATKALRNAGSVPCVVYGGDTVTHFTAPENSFSKLVYTPD---VHTVV 61
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + G+ + +L + P+ T +IL++ FV D +
Sbjct: 62 --------------IALDNGTKINAILQDIQFHPV-------TDKILHIDFVQIFDDKAI 100
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+++PV G PG+ GG LK LK ++ IE D+S L IG++++++
Sbjct: 101 TMEIPVRTTG--KSPGVANGGNLKFNARRLKVKGLPANLPDVIEADISELKIGNKLYVTQ 158
Query: 208 IE 209
+
Sbjct: 159 LN 160
>gi|422732088|ref|ZP_16788434.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0645]
gi|315161889|gb|EFU05906.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0645]
Length = 202
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 39/192 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILST----ERKQIHSILKSVELPFFCSTTFP 101
R +G++PA+V+ QI ST E K + IL+ +T
Sbjct: 22 RHEGKVPAIVYG---------------YQIESTPIYFEEKDLSKILRE----HGANTVIK 62
Query: 102 LQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD--DGTELKVDVPVVFKGVE 159
+ + G + L+ K D TG++L++ F+ + + TE++ +V ++ +
Sbjct: 63 MTVD-GKNINTLMS-------KAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--- 111
Query: 160 SCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
G+K GG L +++ T L P + + IEVD++NL+IGD + ++D+ H +++L+
Sbjct: 112 -SAGVKAGGTLAQNLYTVLVAATP-DKLPESIEVDITNLEIGDALTIADLPEHKDYEILT 169
Query: 219 KNEKMPLCKISA 230
E+ + + A
Sbjct: 170 DPEEQLVAIVEA 181
>gi|403382804|ref|ZP_10924861.1| 50S ribosomal protein L25 [Paenibacillus sp. JC66]
Length = 208
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 24/192 (12%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R++G +PA V+ K+ D S +S +K I ILK+ T P + +
Sbjct: 22 RAEGFVPASVYG-----KSIDNVS------VSVNQKDIFQILKT-NPNGVIQLTLPYENQ 69
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
S V+ V RD +G +L++ F ++ VP+ G G+K
Sbjct: 70 ----------SHPVMIQHVQRDPISGELLHVDFHKIQMDEPVRSMVPIEIVG--EAAGVK 117
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPL 225
+GG L+ L+ C + I +++DV+NL+IG + ++DI V ++LS ++ +
Sbjct: 118 EGGVLQVQAHELEVKCLPDRIPSSLQLDVTNLEIGGNLTVADISVQDGVEVLSDANEVVV 177
Query: 226 CKISATKLENPE 237
++ K E E
Sbjct: 178 TLLAPQKNEEAE 189
>gi|56552806|ref|YP_163645.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis ZM4]
gi|260753467|ref|YP_003226360.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|384412170|ref|YP_005621535.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|397677104|ref|YP_006518642.1| 50S ribosomal protein L25 [Zymomonas mobilis subsp. mobilis ATCC
29191]
gi|68053039|sp|Q5NL76.1|RL25_ZYMMO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|56544380|gb|AAV90534.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis ZM4]
gi|258552830|gb|ACV75776.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis NCIMB 11163]
gi|335932544|gb|AEH63084.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Zymomonas
mobilis subsp. mobilis ATCC 10988]
gi|395397793|gb|AFN57120.1| 50S ribosomal protein L25 [Zymomonas mobilis subsp. mobilis ATCC
29191]
Length = 220
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 130 TGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPK 189
T R+L++ F+ + ++V +PV + E PG+K GG L I LK A I +
Sbjct: 86 TDRVLHVDFLRVSANSLVEVAIPVSYVDEEKSPGIKLGGVLNIIHHELKLKVKATAIPEE 145
Query: 190 IEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
I V V+ L++GD + ++ I++ P L+ +E
Sbjct: 146 IVVSVAGLEVGDSIHLNQIKL-PEGAELAHDE 176
>gi|34558363|ref|NP_908178.1| 50S ribosomal protein L25/general stress protein Ctc [Wolinella
succinogenes DSM 1740]
gi|71153675|sp|Q7M7U7.1|RL25_WOLSU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|34484082|emb|CAE11078.1| PUTATIVE 50S RIBOSOMAL PROTEIN L25 [Wolinella succinogenes]
Length = 178
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
Query: 125 HRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAE 184
+D T +L++ + G E K VPV G S GLK G L + +K C E
Sbjct: 74 QKDPITSDLLHVDLMLVQPGVETKFLVPVKTAG--SAKGLKNKGVLILSKKRVKVKCSPE 131
Query: 185 HISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSK 219
++ E+DVS+LD+GD + + D+ P+ K++ K
Sbjct: 132 NLPASYELDVSDLDVGDAILVRDLPELPNVKVIEK 166
>gi|419538045|ref|ZP_14077408.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 90-3]
gi|419556333|ref|ZP_14094321.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 84-2]
gi|419562449|ref|ZP_14099958.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1091]
gi|419566831|ref|ZP_14104081.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1148]
gi|419572354|ref|ZP_14109275.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 132-6]
gi|419573486|ref|ZP_14110285.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1891]
gi|419576803|ref|ZP_14113370.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 59-2]
gi|419592396|ref|ZP_14127644.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 9854]
gi|419606776|ref|ZP_14141130.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 9860]
gi|380519220|gb|EIA45305.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 90-3]
gi|380534940|gb|EIA59689.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 84-2]
gi|380540871|gb|EIA65162.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1091]
gi|380545489|gb|EIA69465.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1148]
gi|380551182|gb|EIA74790.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 132-6]
gi|380551419|gb|EIA75018.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1891]
gi|380558986|gb|EIA82152.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 59-2]
gi|380572103|gb|EIA94437.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 9854]
gi|380586446|gb|EIB07740.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 9860]
Length = 178
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 26/182 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE G + + + G + A ++ + L + N + ++ +K
Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFK--------------VNEFIK 47
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
V TT ++ GS + V+ + +D T + ++ A G K
Sbjct: 48 EVR----KKTTLIFDVKVGSQTL------SVVVVDYQKDPVTAELKHVDLKVAQKGVISK 97
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV G + GLK G L + LK CPAE++ E+DVS LD+GD + + DI
Sbjct: 98 YMVPVKITG--TAIGLKNKGVLIQSKRRLKVKCPAENLPNFFELDVSKLDVGDALLVRDI 155
Query: 209 EV 210
V
Sbjct: 156 VV 157
>gi|384512516|ref|YP_005707609.1| 50S ribosomal protein L25 [Enterococcus faecalis OG1RF]
gi|430358968|ref|ZP_19425656.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus
faecalis OG1X]
gi|430367404|ref|ZP_19427870.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus
faecalis M7]
gi|327534405|gb|AEA93239.1| 50S ribosomal protein L25 [Enterococcus faecalis OG1RF]
gi|429513526|gb|ELA03106.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus
faecalis OG1X]
gi|429516643|gb|ELA06124.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus
faecalis M7]
Length = 202
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 88/191 (46%), Gaps = 37/191 (19%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILST----ERKQIHSILKSVELPFFCSTTFP 101
R +G++PA+V+ QI ST E K + IL+ +T
Sbjct: 22 RHEGKVPAIVYGY---------------QIESTPIYFEEKDLSKILRE----HGANTVIK 62
Query: 102 LQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD--DGTELKVDVPVVFKGVE 159
+ + G + L+ K D TG++L++ F+ + + TE++ +V ++ +
Sbjct: 63 MTVD-GKNINTLMS-------KAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--- 111
Query: 160 SCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSK 219
G+K GG L ++ + + IEVD++NL+IGD + ++D+ H +++L+
Sbjct: 112 -SAGVKAGGTLAQNSYTVLVAATPDKLPESIEVDITNLEIGDALTIADLPEHKDYEILTD 170
Query: 220 NEKMPLCKISA 230
E+ + + A
Sbjct: 171 PEEQLVAIVEA 181
>gi|254420965|ref|ZP_05034689.1| ribosomal protein L25, Ctc-form [Brevundimonas sp. BAL3]
gi|196187142|gb|EDX82118.1| ribosomal protein L25, Ctc-form [Brevundimonas sp. BAL3]
Length = 231
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 51/92 (55%)
Query: 119 VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLK 178
V+ + D + R ++ + D +K++VPV FK + P +++GG L+ +R +++
Sbjct: 95 VIAKDIQFDPVSDRPMHFDLMRVDQHAPIKIEVPVYFKNADDAPFVRQGGSLEVVRHAVE 154
Query: 179 YLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+ A+ I ++ VD+ +GD + SDIE+
Sbjct: 155 IMVKADSIPEELVVDLIKSQMGDTIRFSDIEL 186
>gi|443328662|ref|ZP_21057257.1| ribosomal protein L25, Ctc-form [Xenococcus sp. PCC 7305]
gi|442791793|gb|ELS01285.1| ribosomal protein L25, Ctc-form [Xenococcus sp. PCC 7305]
Length = 201
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 55/118 (46%), Gaps = 2/118 (1%)
Query: 116 SGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRT 175
SGK + +V + +L F A +L + VP+ G G+K+GG L+ I T
Sbjct: 71 SGKAIIREVQAHPWKRTLYHLSFFSAAGDKKLNLVVPIKLLG--EAKGIKQGGILEQIFT 128
Query: 176 SLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKL 233
L C A I I+VDVSN +IG + + D+ + +L E+ ++ KL
Sbjct: 129 ELHISCAANKIPEHIDVDVSNFEIGTNLTVGDVVLPEGVTVLDDAEQTLFSIVAPAKL 186
>gi|404497696|ref|YP_006721802.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter
metallireducens GS-15]
gi|418067966|ref|ZP_12705292.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter
metallireducens RCH3]
gi|109893365|sp|Q39RQ9.1|RL25_GEOMG RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|78195298|gb|ABB33065.1| ribosomal protein L25 [Geobacter metallireducens GS-15]
gi|373557860|gb|EHP84240.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter
metallireducens RCH3]
Length = 195
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 26/192 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDL--LDKNTDRRSPSRKQILSTERKQIHS 85
TI RE G VS + R+ GR+P VV+ + + + + D + + + R + S
Sbjct: 5 TISIEQREKAGKGVSRKLRAVGRVPGVVYGKGIEPVAVSVDAKELAAAIVGEGGRNNLIS 64
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ L +G++V++ + P+K G +++ F +
Sbjct: 65 LQGGGSL---------------NGNTVIVADLQKAPLK-------GTFISVDFHKINMDE 102
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+++V VPV G + G K+GG L+ + SL C I +EVDV+NL IG + +
Sbjct: 103 KVRVHVPVALIG--TALGAKEGGMLELVMHSLDLECLPSQIPEHVEVDVTNLAIGHAIHV 160
Query: 206 SDIEVHPSWKLL 217
++ + K L
Sbjct: 161 GELVLAAGVKAL 172
>gi|429768221|ref|ZP_19300387.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta 470-4]
gi|429189363|gb|EKY30200.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta 470-4]
Length = 204
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 42/65 (64%)
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
E+K+D+PV F + P ++GG L+ +R +++ + A+ I ++ VD+ +IG+ + +
Sbjct: 101 EIKIDIPVAFINADEAPYTRQGGMLEVVRHTVEIMVRADRIPAELVVDLKGREIGENIRI 160
Query: 206 SDIEV 210
SDI++
Sbjct: 161 SDIQL 165
>gi|381168556|ref|ZP_09877750.1| 50S ribosomal protein L25 [Phaeospirillum molischianum DSM 120]
gi|380682416|emb|CCG42568.1| 50S ribosomal protein L25 [Phaeospirillum molischianum DSM 120]
Length = 206
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 84/203 (41%), Gaps = 21/203 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+I A PR+ +G + R G++P VV+ + KQ + +
Sbjct: 6 SIVAEPRDRSGKGAARAVRRTGKVPGVVYGE--------------KQAAVLIQLDPRVLW 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ P F + F + + GS L + P+ T + +++ F+ +
Sbjct: 52 AQLNKPGFFTQLFDIDLGNGSRERALARDVQFHPV-------TDQPVHVDFLRVSADHAI 104
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VPV S PG+KKGG + ++ +C + I + +D+S L+IG V + D
Sbjct: 105 HVKVPVHVANELSSPGVKKGGVVNIELHEIELVCSPDAIPHGLTIDISALEIGHSVHLKD 164
Query: 208 IEVHPSWKLLSKNEKMPLCKISA 230
I + K + ++ + ISA
Sbjct: 165 IALPAGVKPYHLSPEVTVISISA 187
>gi|229546665|ref|ZP_04435390.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus
faecalis TX1322]
gi|256854329|ref|ZP_05559693.1| ribosomal protein L25 [Enterococcus faecalis T8]
gi|307276208|ref|ZP_07557338.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2134]
gi|307296166|ref|ZP_07575996.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0411]
gi|384517869|ref|YP_005705174.1| 50S ribosomal protein L25 [Enterococcus faecalis 62]
gi|421512894|ref|ZP_15959686.1| LSU ribosomal protein L25p [Enterococcus faecalis ATCC 29212]
gi|422684764|ref|ZP_16742991.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4000]
gi|422725103|ref|ZP_16781572.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0312]
gi|229308232|gb|EEN74219.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus
faecalis TX1322]
gi|256709889|gb|EEU24933.1| ribosomal protein L25 [Enterococcus faecalis T8]
gi|306496140|gb|EFM65720.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0411]
gi|306507120|gb|EFM76260.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX2134]
gi|315030511|gb|EFT42443.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX4000]
gi|315159965|gb|EFU03982.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0312]
gi|323480002|gb|ADX79441.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis 62]
gi|401674015|gb|EJS80381.1| LSU ribosomal protein L25p [Enterococcus faecalis ATCC 29212]
Length = 202
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 39/192 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILST----ERKQIHSILKSVELPFFCSTTFP 101
R +G++PA+V+ QI ST E K + IL+ +T
Sbjct: 22 RHEGKVPAIVYGY---------------QIESTPIYFEEKDLSKILRE----HGANTVIK 62
Query: 102 LQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD--DGTELKVDVPVVFKGVE 159
+ + G + L+ K D TG++L++ F+ + + TE++ +V ++ +
Sbjct: 63 MTVD-GKNINTLMS-------KAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--- 111
Query: 160 SCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
G+K GG L +++ T L P + + IEVD++NL+IGD + ++D+ H +++L+
Sbjct: 112 -SAGVKAGGTLAQNLYTVLVAATP-DKLPESIEVDITNLEIGDALTIADLPEHKDYEILT 169
Query: 219 KNEKMPLCKISA 230
E+ + + A
Sbjct: 170 DPEEQLVAIVEA 181
>gi|300692631|ref|YP_003753626.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum PSI07]
gi|299079691|emb|CBJ52368.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum PSI07]
gi|344168270|emb|CCA80543.1| 5S rRNA binding 50S ribosomal subunit protein L25 [blood disease
bacterium R229]
Length = 203
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 92/217 (42%), Gaps = 32/217 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ PA+++ + +++ + ++ LK
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYG-----------GGAEPKLVELDHNALYHALK 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ +++ AG LL ++ P K +L++ F ++
Sbjct: 52 K---EAFHSSILDIEV-AGKVEKALLRDFQLHPFKQ-------LVLHVDFQRVSATEKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I ++ C + IEVD+ L+IG V +SD
Sbjct: 101 VKVPLHFLNQENAPGVKLGHGIVNHILNDVEVSCLPADLPEFIEVDLGALEIGQTVHISD 160
Query: 208 IEVHPSWKLLSK---------NEKMPLCKISATKLEN 235
+++ +L+ N +P ++SA E
Sbjct: 161 LKLPKGVTILTHGGDENPAVANLSVPAGEVSAAAAEG 197
>gi|117929152|ref|YP_873703.1| 50S ribosomal protein L25/general stress protein Ctc [Acidothermus
cellulolyticus 11B]
gi|117649615|gb|ABK53717.1| LSU ribosomal protein L25P [Acidothermus cellulolyticus 11B]
Length = 203
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 29/181 (16%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I+A PR G + R R G++PAV++ ++ P + +L+ + + L+
Sbjct: 6 IKAEPRTEFGKGAARRVRRAGKVPAVLYGHGTPPRHIS--LPGHELMLALKTPNVLLRLE 63
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKV-LPIKVHRDEETGRILNLVFVWADDGTEL 147
+E P D G++ LP V R+ TG + ++ + G ++
Sbjct: 64 GLEGP---------------------DDGELALPKAVQRNVVTGFLEHVDLLLVRRGEQV 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+VDVP+ F G + GG L+ +L A I +IEV + L+IG +++ D
Sbjct: 103 EVDVPLRFVGTHA-----PGGVLEEHLVALPVRADATRIPEEIEVSLDGLEIGGSIYVRD 157
Query: 208 I 208
+
Sbjct: 158 V 158
>gi|289578962|ref|YP_003477589.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter italicus Ab9]
gi|289528675|gb|ADD03027.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter italicus Ab9]
Length = 202
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 29/193 (15%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+I+AI R+ TG + R + QG IP +++ +D+ + L+ E + +L
Sbjct: 5 SIEAIKRD-TGKNAARRLKKQGYIPGILYGKDMTENIP----------LAVEYNKFQRLL 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + F + + + ++V+ + + D G+I+++ F E+
Sbjct: 54 QQ----HGRNVLFNVIVDGSTHNAVVKE--------IQEDTLKGKIIHIDFQRVSMHEEI 101
Query: 148 KVDVPVVFKGVESCPGL--KKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ VP+ F+G+ GL KGG ++ L + I +I VD+S L+IGD +F+
Sbjct: 102 EATVPLKFEGI----GLIESKGGIVQHQLWELTVESLPDKIPQEIVVDLSKLEIGDTLFV 157
Query: 206 SDIEVHPSWKLLS 218
DI+V K++
Sbjct: 158 KDIQVPEGVKVID 170
>gi|218508780|ref|ZP_03506658.1| 50S ribosomal protein L25/general stress protein Ctc [Rhizobium
etli Brasil 5]
Length = 116
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
T++ V++PV F PGLK GG L +R ++ CPA+ I ++D+S IGD +
Sbjct: 15 TQVSVEIPVHFINEAKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFDIDLSGKKIGDSIH 74
Query: 205 MSDI 208
+S++
Sbjct: 75 ISEV 78
>gi|120612258|ref|YP_971936.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
citrulli AAC00-1]
gi|166223655|sp|A1TT74.1|RL25_ACIAC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|120590722|gb|ABM34162.1| LSU ribosomal protein L25P [Acidovorax citrulli AAC00-1]
Length = 210
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R+ G+ P +V+ + Q++ + + LK
Sbjct: 5 AFERAKQGTGASRRLRNSGKTPGIVYG-----------GSAEPQLIEVDHNALWHALKK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F S+ +++ AG S VLL + P K +L++ F D+ T+L +
Sbjct: 53 --EAFHSSVLDMEL-AGKTSKVLLRDVQYHPYK-------QLVLHIDFQRVDEKTKLHMK 102
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F G E P +K + + T L C + I VD+S L+ G + + DI+
Sbjct: 103 VPLHFTGAEESPAVKIDKCMVNPVATELDVSCMPSDLPEFINVDLSKLEKGRSLHLKDIK 162
Query: 210 V 210
+
Sbjct: 163 L 163
>gi|417859353|ref|ZP_12504409.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens F2]
gi|338822417|gb|EGP56385.1| 50S ribosomal protein L25/general stress protein Ctc [Agrobacterium
tumefaciens F2]
Length = 174
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
KVLP D +++ F+ T + V+VPV F E +K GG L +R ++
Sbjct: 47 KVLPKDYQLDPVRDFTMHVDFLRVSGNTLVNVEVPVHFVNEEKS-DIKIGGVLNIVRHTV 105
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
++ CPA I I VD++ L IGD V +S++++
Sbjct: 106 EFHCPANDIPEFITVDLAGLKIGDNVHISNVKL 138
>gi|365092330|ref|ZP_09329478.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. NO-1]
gi|363415454|gb|EHL22581.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. NO-1]
Length = 211
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R+ G+ P +V+ + Q++ + + LK
Sbjct: 5 AFERAKQGTGASRRLRNSGKTPGIVYG-----------GTTEPQLIELDHNALWHALKK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F S+ +++ AG+ S VLL + P K +L++ F D+ T+L +
Sbjct: 53 --EAFHSSVLDMEV-AGTTSKVLLRDVQYHPFK-------QLVLHIDFQRVDEKTKLHMK 102
Query: 151 VPVVFKGVESCPGLKKGG-YLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F G E P +K + + L C + I VD+S L+ G + + DI+
Sbjct: 103 VPLHFSGAEESPAVKVDKCMINPVVNELDVTCMPSDLPEFIAVDLSKLEKGTSLHLKDIK 162
Query: 210 V 210
+
Sbjct: 163 L 163
>gi|307289481|ref|ZP_07569429.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0109]
gi|422703864|ref|ZP_16761680.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1302]
gi|306499577|gb|EFM68946.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0109]
gi|315164680|gb|EFU08697.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX1302]
Length = 202
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 92/192 (47%), Gaps = 39/192 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILST----ERKQIHSILKSVELPFFCSTTFP 101
R +G++PA+V+ QI ST E K + IL+ +T
Sbjct: 22 RHEGKVPAIVYGY---------------QIESTPIYFEEKDLSKILRE----HGANTVIK 62
Query: 102 LQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD--DGTELKVDVPVVFKGVE 159
+ + G + L+ K D TG++L++ F+ + + TE++ +V ++ +
Sbjct: 63 ITVD-GKNINTLMS-------KAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--- 111
Query: 160 SCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
G+K GG L +++ T L P + + IEVD++NL+IGD + ++D+ H +++L+
Sbjct: 112 -SAGVKAGGTLAQNLYTVLVAATP-DKLPESIEVDITNLEIGDALTIADLPEHKDYEILT 169
Query: 219 KNEKMPLCKISA 230
E+ + + A
Sbjct: 170 DPEEQLVAIVEA 181
>gi|313144501|ref|ZP_07806694.1| 50S ribosomal protein L25 [Helicobacter cinaedi CCUG 18818]
gi|313129532|gb|EFR47149.1| 50S ribosomal protein L25 [Helicobacter cinaedi CCUG 18818]
Length = 178
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 117 GKVLPIKVH---RDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGG--YLK 171
GK L + V +D T I+++ + A G K VPV KG S GLK G ++
Sbjct: 63 GKTLDVVVQEYQKDPVTNTIIHVDLLLAQKGVVSKYKVPVSVKG--SAKGLKNKGVLFIS 120
Query: 172 SIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ R S+K C AE + E+DVS+LD+GD + + D+
Sbjct: 121 TKRISVK--CTAEKLPNTYELDVSDLDVGDSILIRDL 155
>gi|254424497|ref|ZP_05038215.1| ribosomal protein L25, Ctc-form [Synechococcus sp. PCC 7335]
gi|196191986|gb|EDX86950.1| ribosomal protein L25, Ctc-form [Synechococcus sp. PCC 7335]
Length = 216
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 116 SGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRT 175
SGKV+ +V + ++ +L F +E++V +P+ F G ++ +GG L ++ T
Sbjct: 71 SGKVILREVQKHPWKNKLHHLSFFSIASQSEIEVSMPINFVG-DAVGVTDEGGTLDTVMT 129
Query: 176 SLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
++ CP + I ++VDVS L IGD + + +I++
Sbjct: 130 EIQLKCPPDAIPQSLDVDVSELKIGDALHVGEIKL 164
>gi|300705252|ref|YP_003746855.1| 5S rRNA binding 50S ribosomal subunit protein l25 [Ralstonia
solanacearum CFBP2957]
gi|421889572|ref|ZP_16320597.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum K60-1]
gi|299072916|emb|CBJ44272.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum CFBP2957]
gi|378965094|emb|CCF97345.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
solanacearum K60-1]
Length = 203
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ PA+++ + +++ + ++ LK
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYG-----------GGAEPKMIELDHNALYHALK 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ +++ AG LL ++ P K +L++ F ++
Sbjct: 52 K---EAFHSSILDIEV-AGKSEKALLRDFQLHPFKQ-------LVLHVDFQRVSATEKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I ++ C + IEVD+ L+IG + +SD
Sbjct: 101 VKVPLHFLNQENAPGVKLGHGIVNHILNDVEVSCLPADLPEFIEVDLGTLEIGQTLHISD 160
Query: 208 IEV 210
+++
Sbjct: 161 LKL 163
>gi|332285374|ref|YP_004417285.1| 50S ribosomal protein L25 [Pusillimonas sp. T7-7]
gi|330429327|gb|AEC20661.1| 50S ribosomal protein L25 [Pusillimonas sp. T7-7]
Length = 207
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 27/183 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSI 86
A R G+ S R R GR+PA+V+ D L D +I RK+
Sbjct: 3 FNATSRSDKGTSASRRLRHAGRVPAIVYGGTADPLSIELDH-----NEIFHALRKEA--- 54
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
F ++ +Q+ G G VLL + + P K ++L++ F D
Sbjct: 55 --------FHASILDMQLD-GKGQQVLLRAVQWHPYKP-------QVLHVDFQRVDAKQT 98
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKS-IRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ VP+ F ++ P +K G + S + T L+ C + IE+D+ L G V++
Sbjct: 99 ITTKVPLHFINGDASPAVKLSGQIISHVMTELEITCLPVDLPQAIEIDLGELAAGGNVYL 158
Query: 206 SDI 208
SDI
Sbjct: 159 SDI 161
>gi|254477596|ref|ZP_05090982.1| ribosomal protein L25, Ctc-form [Ruegeria sp. R11]
gi|214031839|gb|EEB72674.1| ribosomal protein L25, Ctc-form [Ruegeria sp. R11]
Length = 179
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV F E+ PG+K+GG L ++R ++ + A I K+ VD++ L+IGD V +S +
Sbjct: 81 VPVEFINEEAAPGIKRGGVLTAVRPEVELVVTAGDIPEKLVVDLTGLNIGDTVTISSV 138
>gi|110681037|ref|YP_684044.1| 50S ribosomal protein L25 [Roseobacter denitrificans OCh 114]
gi|122972523|sp|Q161I5.1|RL25_ROSDO RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109457153|gb|ABG33358.1| ribosomal protein L25, Ctc-form [Roseobacter denitrificans OCh 114]
Length = 212
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 78/182 (42%), Gaps = 21/182 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG + + R G +P +VF D+ P I + ++K +
Sbjct: 13 RTGTGKGAARQARRDGMVPGIVFGGDV--------DPLPINI------PFNVLIKKLREG 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ST F +++ D +V+ V R ++ F+ T++ + + V
Sbjct: 59 RFKSTLFNMKVEGH-------DDVRVICRDVQRHVVKDLPTHIDFMRLKRTTKINLFIAV 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
+G + PGLKKGG L IR ++ + A I + +D+S ++IGD + +S + +
Sbjct: 112 EVEGEDVAPGLKKGGVLTLIRPEVELIVTAGDIPDHVTIDISEMEIGDNITISSVNLPEG 171
Query: 214 WK 215
K
Sbjct: 172 AK 173
>gi|410945051|ref|ZP_11376792.1| 50S ribosomal protein L25/general stress protein Ctc [Gluconobacter
frateurii NBRC 101659]
Length = 219
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
GT++ V+V +VF G E PG+K+GG L +R + +I D+S LDI D V
Sbjct: 101 GTKVHVEVSIVFTGEEKAPGIKRGGVLNVVRHYVDVAADPANIPEHFTADLSALDIHDSV 160
Query: 204 FMSDIE 209
+D++
Sbjct: 161 RWADLK 166
>gi|403049128|ref|ZP_10903612.1| 50S ribosomal protein L25/general stress protein Ctc [SAR86 cluster
bacterium SAR86D]
Length = 235
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 88/183 (48%), Gaps = 26/183 (14%)
Query: 29 IQAIPRECTGSRVSARDRS-QGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A RE TGS + R G +PA+V+ + + S + K L + +
Sbjct: 7 LNAETRERTGSNKARVIRKVDGMVPAIVYGDE-------KESLNLKLYL-------NELT 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K+ + F + L I+ G KV+ ++ RD G+ L+ F T+L
Sbjct: 53 KASQNELFYTQV--LLIKNGDLEE------KVVLKELQRDPAKGKFLHADFQRVSRKTKL 104
Query: 148 KVDVPVVFKGVESCPGLKKGGYL--KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
KV +P+ F + C G+K G L K+IR ++ +C A +I I+VDV++L++G + +
Sbjct: 105 KVIIPMNFINEDECVGVKNDGGLITKAIR-EVEIMCLAGNIPESIDVDVTDLELGASIRL 163
Query: 206 SDI 208
+++
Sbjct: 164 TEV 166
>gi|414341970|ref|YP_006983491.1| 50S ribosomal protein L25 [Gluconobacter oxydans H24]
gi|411027305|gb|AFW00560.1| 50S ribosomal protein L25 [Gluconobacter oxydans H24]
Length = 215
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R G +PAV++ ++ PS I++ + + I+K + + S + L
Sbjct: 21 RRAGLVPAVIYG--------GKQEPS---IIALDPR---VIMKELHRGGWSSRVYNLAAE 66
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
+ L+ ++ P+ T +++ F GT++ V+V +VF G E PG+K
Sbjct: 67 GAEPVAALIRDVQLHPV-------TDAPIHVDFQRVSAGTKVHVEVSIVFTGEEKAPGIK 119
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
+GG L +R + +I D+S LDI D V +D++
Sbjct: 120 RGGVLNVVRHYVDVAADPANIPEHFTADLSALDIHDSVRWADLK 163
>gi|453328665|dbj|GAC89093.1| 50S ribosomal protein L25 [Gluconobacter thailandicus NBRC 3255]
Length = 215
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
GT++ V+V +VF G E PG+K+GG L +R + +I D+S LDI D V
Sbjct: 98 GTKVHVEVSIVFTGEEKAPGIKRGGVLNVVRHYVDVAADPANIPEHFTADLSALDIHDSV 157
Query: 204 FMSDIE 209
+D++
Sbjct: 158 RWADLK 163
>gi|311108748|ref|YP_003981601.1| 50S ribosomal protein L25, Ctc-form [Achromobacter xylosoxidans A8]
gi|310763437|gb|ADP18886.1| ribosomal protein L25, Ctc-form [Achromobacter xylosoxidans A8]
Length = 204
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 75/184 (40%), Gaps = 23/184 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
A R GS S R R GR+PA+V+ N + + +I+ L+
Sbjct: 3 FNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIE-----------LDHNEIYHALR 51
Query: 89 SVELPFFCSTTFPLQIR-AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
E F ++ + + A VLL S V ++L++ F D L
Sbjct: 52 KEE---FHASILQMALEGAAKEEQVLLRS-------VQWHAYKPQVLHVDFQRVDANQAL 101
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKS-IRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
VP F E P +K GG + S + T L+ C + IEVD+ +L G V ++
Sbjct: 102 HTKVPFHFINAEVSPAVKLGGAIISHVLTELEVTCLPAALPQFIEVDLKDLLPGASVHLA 161
Query: 207 DIEV 210
DI++
Sbjct: 162 DIKL 165
>gi|295110890|emb|CBL27640.1| ribosomal protein L25, Ctc-form [Synergistetes bacterium SGP1]
Length = 216
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 86/178 (48%), Gaps = 25/178 (14%)
Query: 33 PRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSR--KQILSTERKQIHSILKSV 90
PRE TG + R R +G P + + + +K+ + +R ++IL+T R + S+ +V
Sbjct: 3 PREETGKGANGRLRRKGYTPCIFYGPQM-EKSVQGKLKTRDVERILATGRWE--SMRLNV 59
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
LP G+ ++ +V P+ T L++ F+ G ++ V+
Sbjct: 60 TLP------------DGTEEMCIIREVQVNPL-------TDCPLHVDFLRLIKGRKITVN 100
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+P+ G ES PG+K GG L+++R P +I + VDVS L IGD + + D+
Sbjct: 101 IPIEVLGRESAPGVKDGGVLETLREVEVETLPM-NIPDVLTVDVSALQIGDAIHVRDL 157
>gi|358451352|ref|ZP_09161786.1| 50S ribosomal protein L25/general stress protein Ctc [Marinobacter
manganoxydans MnI7-9]
gi|357224585|gb|EHJ03116.1| 50S ribosomal protein L25/general stress protein Ctc [Marinobacter
manganoxydans MnI7-9]
Length = 216
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 84/187 (44%), Gaps = 28/187 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
I+A PR+ G S R R + R IPA+++ + + + I E K
Sbjct: 6 VIEAFPRDDQGRGASRRLRREERKIPAIIYGGN--------KDATPIAIWHNELK----- 52
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDG 144
K++E F S +++ S +L D + PI H D F+ D
Sbjct: 53 -KALENEAFFSHVLTVELNGKKESVILKDLQRHPYKPILTHAD----------FLRVDKD 101
Query: 145 TELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
E+ V+VP+ F ++ P +K GG ++ +C +++ IEVD++++++ V
Sbjct: 102 HEIHVNVPLHFINEDTAPAIKLHGGVANHQINEVEVICLPQNLPEFIEVDMTSVEMDQVV 161
Query: 204 FMSDIEV 210
+SD+++
Sbjct: 162 HLSDLKL 168
>gi|399019855|ref|ZP_10721998.1| ribosomal protein L25, Ctc-form [Herbaspirillum sp. CF444]
gi|398096874|gb|EJL87189.1| ribosomal protein L25, Ctc-form [Herbaspirillum sp. CF444]
Length = 202
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 91/207 (43%), Gaps = 26/207 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A PR+ G+ S R R+ G+ PA+V+ N ++ + ++ LK
Sbjct: 5 AFPRKEQGTGASRRLRNAGQTPAIVYGGTAAPLN-----------IALDHNALYHALKK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F S+ L+I G VLL +VH ++ +L++ F D ++ V
Sbjct: 53 --EAFHSSILDLEID-GKVEQVLLRD-----FQVHAYKQL--VLHVDFQRVDASQKIHVK 102
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F E P +K G + + T L C + + + VD+S L++G + ++D++
Sbjct: 103 VPLHFVNAEVSPAVKLSSGIISHVMTDLDISCLPKDLPEFVSVDLSKLEVGHSIHLADLQ 162
Query: 210 VHPSWKLLSKNEKMPLCKIS--ATKLE 234
+ PS E + + S A K+E
Sbjct: 163 L-PSGVTAVSQENLTVATASVPAGKVE 188
>gi|206602648|gb|EDZ39129.1| Ribosomal protein L25 [Leptospirillum sp. Group II '5-way CG']
Length = 207
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 24/209 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R G ++ R R G+IPAV++++ ++ S L+ +K HS S
Sbjct: 11 RSSNGKGIARRLRMAGQIPAVLYSRG--------KATSLSLNLAHVQKAFHSHAGS---- 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPI--KVHRDEETGRILNLVFVWADDGTELKVDV 151
F L++ S G V+ + V RD TGRI++L F + ++ V
Sbjct: 59 ---HAIFRLKVTGASDGK-----GSVMALIRDVQRDPLTGRIMHLDFFELSEKDLVRNKV 110
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
PV G E+ G+K GG L+ + C + ++VD S L + + + D+
Sbjct: 111 PVEIIG-ETPAGVKLGGVLEHHVREITVECLPAAMPDHLKVDASTLSMNESFHVRDLPAM 169
Query: 212 PSWKLLSKNEKMPLCKISATKLENPEPAV 240
P ++L N L I + E P V
Sbjct: 170 PGLRVLD-NPDTVLVHILPPRTEAPAETV 197
>gi|326318320|ref|YP_004235992.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Acidovorax
avenae subsp. avenae ATCC 19860]
gi|323375156|gb|ADX47425.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 210
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 77/181 (42%), Gaps = 23/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R+ G+ P +V+ + Q++ + + LK
Sbjct: 5 AFERAKQGTGASRRLRNSGKTPGIVYG-----------GSAEPQLIEVDHNALWHALKK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F S+ +++ AG S VLL + P K +L++ F D+ T+L +
Sbjct: 53 --EAFHSSVLDMEL-AGKTSKVLLRDVQYHPYK-------QLVLHIDFQRVDEKTKLHMK 102
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F G E P +K + + T L C + I VD+S L+ G + + DI+
Sbjct: 103 VPLHFSGAEESPAVKIDKCMVNPVATELDVSCMPSDLPEFINVDLSKLEKGRSLHLKDIK 162
Query: 210 V 210
+
Sbjct: 163 L 163
>gi|300115103|ref|YP_003761678.1| ribosomal 5S rRNA E-loop-binding protein Ctc/l25/Tl5 [Nitrosococcus
watsonii C-113]
gi|299541040|gb|ADJ29357.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Nitrosococcus
watsonii C-113]
Length = 215
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 24/184 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL- 87
+ A R G S R R G++PAV++ + K+ +S H++L
Sbjct: 7 LHADVRAEQGKGASRRLRRAGKVPAVLYG-------------AAKEPISLIFD--HNLLF 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + F S + G V+L + + P+ ++L+L +L
Sbjct: 52 RHLSHDAFYSHILTIHAN-GKAEKVVLKALQRDPVN------PNKVLHLDLQRVSAAQKL 104
Query: 148 KVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ VP+ F G E+ PG+K+ GG + + ++ C A+ + IEVD++NL +G+ V +S
Sbjct: 105 TIKVPLHFIGDETAPGVKQEGGTVARLLNDVEVSCLAKDLPEYIEVDLANLGVGETVHLS 164
Query: 207 DIEV 210
D+++
Sbjct: 165 DLKL 168
>gi|113866401|ref|YP_724890.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia
eutropha H16]
gi|122947171|sp|Q0KEP9.1|RL25_RALEH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|113525177|emb|CAJ91522.1| LSU ribosomal protein L25 [Ralstonia eutropha H16]
Length = 205
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 84/197 (42%), Gaps = 23/197 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ P +++ + K I H++ K
Sbjct: 3 VVAFERSVQGTGASRRLRNSGKTPGIIYGG----------AAEPKMIELDHNALWHALKK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ L++ AG LL + ++ P K +L++ F ++
Sbjct: 53 EA----FHSSILELEV-AGKSEQALLRAFQMHPFK-------PLVLHVDFQRVSANDKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I L+ C + IEVD++ +++ V +SD
Sbjct: 101 VKVPLHFMNQETAPGVKLGHGIVNHILNDLEVSCLPADLPEFIEVDLAAVELNQTVHLSD 160
Query: 208 IEVHPSWKLLSKNEKMP 224
I++ +++ + P
Sbjct: 161 IKLPKGVTVITHGDDNP 177
>gi|83588951|ref|YP_428960.1| 50S ribosomal protein L25/general stress protein Ctc [Moorella
thermoacetica ATCC 39073]
gi|109893369|sp|Q2RMC2.1|RL25_MOOTA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|83571865|gb|ABC18417.1| LSU ribosomal protein L25P [Moorella thermoacetica ATCC 39073]
Length = 208
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 27/196 (13%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRK--QILSTERKQIH 84
T++ R G + + R R QG++P +++ + + N P+R+ IL+TE + +
Sbjct: 4 QTLEVTMRPEVGKQAARRLRRQGKLPGIIYGKKI--ANLAVIIPARQLEHILATEGE--N 59
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
++LK V + F IR +V R G + ++ F
Sbjct: 60 ALLKLVVSGDGQNKEFTAVIR-----------------EVQRHPLKGNLTHVDFYQVSME 102
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLK-SIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+L+ VPV+ +G G+K+GG L+ +R PA+ + I VDVS+L +G+ +
Sbjct: 103 DKLRATVPVILEG--EARGVKEGGILQHGVREIEIESLPAD-LPESIVVDVSHLGVGEHL 159
Query: 204 FMSDIEVHPSWKLLSK 219
+ +I+V K+LS+
Sbjct: 160 TVGEIKVPAGVKILSE 175
>gi|146276403|ref|YP_001166562.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides ATCC 17025]
gi|166223711|sp|A4WPE3.1|RL25_RHOS5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|145554644|gb|ABP69257.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides ATCC 17025]
Length = 203
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 85/202 (42%), Gaps = 22/202 (10%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
QA R TG + + R +G +P +V+ ++ LS K + +L
Sbjct: 8 FQAEVRTGTGKGAARQARREGYVPGIVYG-------------GGQEPLSINVK-YNDLLN 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F T F L++ + +V+ V RD ++ F+ + +
Sbjct: 54 RLKKGRFLQTLFNLKVEG-------QEDVRVICRGVQRDVVKDLPTHVDFMRLRRTSRIN 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ + V F+ + PGLK+GG L +R ++ A I I VD++ IGD + + DI
Sbjct: 107 LFIHVTFENHDQAPGLKRGGTLTVVRPEVELEVTAGDIPDHITVDLTGKQIGDVIHIQDI 166
Query: 209 EVHPSWKLLSKNEKMPLCKISA 230
+ P + + N + ISA
Sbjct: 167 AL-PEGAVPTINRNFVIANISA 187
>gi|33595506|ref|NP_883149.1| 50S ribosomal protein L25 [Bordetella parapertussis 12822]
gi|33599891|ref|NP_887451.1| 50S ribosomal protein L25 [Bordetella bronchiseptica RB50]
gi|410418667|ref|YP_006899116.1| 50S ribosomal protein L25 [Bordetella bronchiseptica MO149]
gi|412339839|ref|YP_006968594.1| 50S ribosomal protein L25 [Bordetella bronchiseptica 253]
gi|427813134|ref|ZP_18980198.1| 50S ribosomal protein L25 [Bordetella bronchiseptica 1289]
gi|427821056|ref|ZP_18988119.1| 50S ribosomal protein L25 [Bordetella bronchiseptica D445]
gi|427823707|ref|ZP_18990769.1| 50S ribosomal protein L25 [Bordetella bronchiseptica Bbr77]
gi|71153123|sp|Q7WNY3.1|RL25_BORBR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153125|sp|Q7W180.1|RL25_BORPA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|33565584|emb|CAE40227.1| 50S ribosomal protein L25 [Bordetella parapertussis]
gi|33567488|emb|CAE31401.1| 50S ribosomal protein L25 [Bordetella bronchiseptica RB50]
gi|408445962|emb|CCJ57627.1| 50S ribosomal protein L25 [Bordetella bronchiseptica MO149]
gi|408769673|emb|CCJ54457.1| 50S ribosomal protein L25 [Bordetella bronchiseptica 253]
gi|410564134|emb|CCN21675.1| 50S ribosomal protein L25 [Bordetella bronchiseptica 1289]
gi|410572056|emb|CCN20311.1| 50S ribosomal protein L25 [Bordetella bronchiseptica D445]
gi|410588972|emb|CCN04035.1| 50S ribosomal protein L25 [Bordetella bronchiseptica Bbr77]
Length = 204
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 73/183 (39%), Gaps = 22/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
A R GS S R R GR+PA+V+ N + + +I+ L+
Sbjct: 3 FNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLN-----------IELDHNEIYHALR 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
E F ++ + I G VLL S V +++++ F D L
Sbjct: 52 KEE---FHASILNMVIEGGKTEEVLLRS-------VQWHAYKPQVMHVDFQRVDANQALH 101
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VP+ F E P +K G + + T L C + IEV++ +L G + ++D
Sbjct: 102 TKVPLHFINAEVSPAVKLSGAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLAD 161
Query: 208 IEV 210
I++
Sbjct: 162 IKL 164
>gi|352102010|ref|ZP_08959057.1| 50S ribosomal protein L25 [Halomonas sp. HAL1]
gi|350600181|gb|EHA16251.1| 50S ribosomal protein L25 [Halomonas sp. HAL1]
Length = 213
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R+ ++PAVV+ + Q +S E+ + K++E F S+ L I
Sbjct: 24 RANQQVPAVVYGGE-----------KGAQSISVEKTAFY---KAIEDESFFSSVIKLMIE 69
Query: 106 AGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPG 163
V+ D + P+ H D F+ D E+ ++VP+ G E+C G
Sbjct: 70 GKEEQVVVRDLQRHPFKPLLTHAD----------FLRVDATHEITMNVPLHVNGEEACVG 119
Query: 164 LK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+K +GG L + + C + + +EVD+S L++G + +SD+
Sbjct: 120 IKDQGGELHVLANEVAISCLPKDLPDYLEVDISALELGTTLHLSDL 165
>gi|354582109|ref|ZP_09001011.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus
lactis 154]
gi|353199508|gb|EHB64970.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus
lactis 154]
Length = 209
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 52/93 (55%), Gaps = 2/93 (2%)
Query: 131 GRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKI 190
G + ++ F+ ++V +PV + G + PG K GG L++ T L+ + +
Sbjct: 86 GNVAHIDFLRISMNKPVRVSIPVEYHG--TAPGTKTGGILQTQVTELEVEGLPGELPSTL 143
Query: 191 EVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKM 223
E DVS+L+IGD++ ++DI+V L + +E++
Sbjct: 144 EADVSSLEIGDKLTVADIQVPKGITLHASDEEV 176
>gi|340357159|ref|ZP_08679784.1| 50S ribosomal protein L25 [Sporosarcina newyorkensis 2681]
gi|339618568|gb|EGQ23164.1| 50S ribosomal protein L25 [Sporosarcina newyorkensis 2681]
Length = 227
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 131 GRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKS-IRTSLKYLCPAEHISPK 189
G I + F+ + EL+V+V + G PG K+GG L+ IR + P++ I
Sbjct: 100 GNITHADFLSINMTEELEVEVVINLVG--ESPGEKQGGTLQQPIREVTIRVKPSD-IPES 156
Query: 190 IEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLE 234
I+VDVS L+IGD + +SD+ ++++L+++E L +SA + E
Sbjct: 157 IDVDVSELEIGDTLLVSDVRAKAAYEILNEDEDT-LVLVSAPRTE 200
>gi|317486441|ref|ZP_07945268.1| ribosomal protein L25 [Bilophila wadsworthia 3_1_6]
gi|345888199|ref|ZP_08839309.1| 50S ribosomal protein L25 [Bilophila sp. 4_1_30]
gi|316922351|gb|EFV43610.1| ribosomal protein L25 [Bilophila wadsworthia 3_1_6]
gi|345040984|gb|EGW45190.1| 50S ribosomal protein L25 [Bilophila sp. 4_1_30]
Length = 192
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 97 STTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFK 156
+T F L+I G G+ VL RD T R ++ F D +K+ VPV F
Sbjct: 60 TTVFNLEIE-GDGTH------PVLIWATQRDPITSRFTHIDFYGVDLDKPVKITVPVEFT 112
Query: 157 GVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
GV G K GG L++ R ++ + + K+ +D+S +D+G + ++D+++ K
Sbjct: 113 GV--ARGTKVGGKLETYREQIQLMAKPLDMPAKVTIDISGMDVGTTIQIADVKLPEGVKA 170
Query: 217 LSKN 220
N
Sbjct: 171 AYDN 174
>gi|121997779|ref|YP_001002566.1| 50S ribosomal protein L25/general stress protein Ctc
[Halorhodospira halophila SL1]
gi|166223688|sp|A1WVQ2.1|RL25_HALHL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|121589184|gb|ABM61764.1| LSU ribosomal protein L25P [Halorhodospira halophila SL1]
Length = 209
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 86/180 (47%), Gaps = 22/180 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A PR TG R R R+P VV+ + Q ++ E Q++ +L+
Sbjct: 7 LDAHPRTETGRGAMRRLRRARRVPGVVYG-----------AGKEPQPVALENDQLYRLLE 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
E FF ST +Q+ + + +++ D ++ H + + ++L V D +
Sbjct: 56 --EEAFF-STILKVQMGSETEQAIVKD------LQRHPFKPLVQHIDLQRVRED--QPIT 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V VP+ G E PG+KKGG L L+ +C + + P I+VDVS+L +G V +S++
Sbjct: 105 VHVPLHVHGEEQSPGVKKGGVLHHDLLDLEVVCLPKDLPPFIDVDVSSLKVGQAVHISEL 164
>gi|254450901|ref|ZP_05064338.1| ribosomal protein L25, Ctc-form [Octadecabacter arcticus 238]
gi|198265307|gb|EDY89577.1| ribosomal protein L25, Ctc-form [Octadecabacter arcticus 238]
Length = 215
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 30 QAIPRECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+A R TG + + R G +P VV+ +D + N + +L
Sbjct: 9 EATLRTDTGKGAARQARRDGLVPGVVYGGGEDPISINV----------------PFNVLL 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K ++ F ST F L++ D +V+ V R +L F+ T++
Sbjct: 53 KRLKAGRFLSTLFNLKVEGH-------DDVRVICRNVQRHIVKDLPTHLDFMRLKRTTKI 105
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ + V F E CP LK+GG L +R ++ + A I + VD++ L++GD + +S
Sbjct: 106 NLFIGVEFINEEDCPALKEGGVLIPVRNEVELIVTAGDIPEVLTVDLTGLELGDTITISS 165
Query: 208 IEVHPSWK 215
I++ K
Sbjct: 166 IKLPAGAK 173
>gi|254486127|ref|ZP_05099332.1| ribosomal protein L25, Ctc-form [Roseobacter sp. GAI101]
gi|214042996|gb|EEB83634.1| ribosomal protein L25, Ctc-form [Roseobacter sp. GAI101]
Length = 186
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
T++ + + V G E CPGLKKGG L +R ++ + A I I VD+S L IGD
Sbjct: 75 TKINLFIQVEVSGEEECPGLKKGGVLTLVRPEVELVVTAGDIPDHITVDISGLQIGDSAT 134
Query: 205 MSDI 208
++++
Sbjct: 135 IANV 138
>gi|254787718|ref|YP_003075147.1| 50S ribosomal protein L25/general stress protein Ctc
[Teredinibacter turnerae T7901]
gi|237686716|gb|ACR13980.1| ribosomal protein L25/general stress protein Ctc [Teredinibacter
turnerae T7901]
Length = 209
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 78/184 (42%), Gaps = 23/184 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G S R R +PA+V+ + + P I E +
Sbjct: 7 TLNAKARDDQGKGASRRLRHDNLVPAIVYGGE--------KDPQNIAIAQNE------FV 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K +E F S L + G V+L + P K ++L+ F+ +L
Sbjct: 53 KHLENEAFYSHIVTLVVD-GEKQDVILKDLQRHPAK-------AQLLHADFLRVSRTQKL 104
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
VP+ F ESC G+K +GG + T L+ C + + IEVD+ + ++G V +S
Sbjct: 105 TTRVPLHFINEESCKGVKLQGGVVAHSLTELEISCLPQDLPEFIEVDLKDAEVGHIVHIS 164
Query: 207 DIEV 210
D+ +
Sbjct: 165 DLNL 168
>gi|344173546|emb|CCA88713.1| 5S rRNA binding 50S ribosomal subunit protein L25 [Ralstonia
syzygii R24]
Length = 207
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ PA+++ + +++ + ++ LK
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYG-----------GGAEPKLVELDHNALYHALK 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ +++ AG LL ++ P K +L++ F ++
Sbjct: 52 K---EAFHSSILDIEV-AGKVEKALLRDFQLHPFK-------QLVLHVDFQRVSATEKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I ++ C + IEVD+ L+IG V +SD
Sbjct: 101 VKVPLHFLNQENAPGVKLGHGIVNHILNDVEVSCLPADLPEFIEVDLGALEIGQTVHISD 160
Query: 208 IEV 210
+++
Sbjct: 161 LKL 163
>gi|381186767|ref|ZP_09894336.1| LSU ribosomal protein L25p [Flavobacterium frigoris PS1]
gi|379651194|gb|EIA09760.1| LSU ribosomal protein L25p [Flavobacterium frigoris PS1]
Length = 203
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 97/205 (47%), Gaps = 29/205 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+ RE G + R+ G +P V++ D P S E K S++
Sbjct: 5 TIKGSERESVGKVATKALRNAGAVPCVIYGGD---------QPVH---FSAEEKAFKSLV 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + T +++ S +++L D I+VH + RIL++ F D E+
Sbjct: 53 YTPN-----AHTVVIELEGKSFNAILQD------IQVH--PVSDRILHIDFFQIFDEKEI 99
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
++VPV K + + G+ GG L+ LK +++ IE D++ LD+G++++++
Sbjct: 100 TIEVPV--KIIGNSKGVMAGGDLRLNNRKLKVRALPKNLPDFIEADITGLDMGNKLYVTK 157
Query: 208 IEVHPSWKLLSKNEKMPLCKISATK 232
+ ++K++ + + +C++ ++
Sbjct: 158 VPTE-NFKIMHPDNTV-ICQVKISR 180
>gi|315301103|ref|ZP_07872397.1| ribosomal protein L25, Ctc-form [Listeria ivanovii FSL F6-596]
gi|313630524|gb|EFR98363.1| ribosomal protein L25, Ctc-form [Listeria ivanovii FSL F6-596]
Length = 207
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 33/185 (17%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQ-IHSI 86
T++ RE T + RS+G++P +++ S +S + + I ++
Sbjct: 4 TLEVQKRETTQHSEVTKLRSEGKVPGIIYGYK-----------SENVPVSVDSLELIKAV 52
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADD 143
+ F T G +VLL +V P+K VH D + D
Sbjct: 53 RDNGRNAVFAVTV------DGKKLNVLLHEYQVDPLKDILVHVD----------LLAVDM 96
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
E++ DV VV G PG+K GG L+ I +K E + IE+D+S+L+IGD +
Sbjct: 97 NEEVETDVRVVLVG--DAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVL 154
Query: 204 FMSDI 208
+D+
Sbjct: 155 TTNDL 159
>gi|383788144|ref|YP_005472712.1| 50S ribosomal protein L25 [Caldisericum exile AZM16c01]
gi|381363780|dbj|BAL80609.1| 50S ribosomal protein L25 [Caldisericum exile AZM16c01]
Length = 222
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 31/194 (15%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+I A RE T + + R G+IPAVV+ + + +T + + K+ ER+ S +
Sbjct: 5 SINAEKREVTTKGNNNKLRQDGKIPAVVYGKIV---DTFYVAVNYKEFTKLEREVGRSAI 61
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPI---KVHRDEETGRILNLVFVWADDG 144
F L I GKV P +V D ++++ F D
Sbjct: 62 ------------FDLNI-----------DGKVYPTIIKEVQIDPIKRNVIHIDFEAVDLS 98
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
+ +P+ F G G+KKGG L+ ++ + KIEV+VSNLDI D ++
Sbjct: 99 KPVYTTIPITFVG--EAVGVKKGGILEPSLHEIEVEGLLTDLPDKIEVNVSNLDIKDVIY 156
Query: 205 MSDIEVHPSWKLLS 218
+ D+ + K+ S
Sbjct: 157 VKDLNLGEKVKIYS 170
>gi|427736084|ref|YP_007055628.1| 50S ribosomal protein L25 [Rivularia sp. PCC 7116]
gi|427371125|gb|AFY55081.1| LSU ribosomal protein L25P [Rivularia sp. PCC 7116]
Length = 205
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 66/128 (51%), Gaps = 9/128 (7%)
Query: 104 IRAGSGSSVLLD--------SGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVF 155
+R S ++ L+D G+ L +V TG+ +L F ++ V+VP +
Sbjct: 51 LRKASVNNTLIDLKVADIPWEGQTLLREVQAHPATGKPYHLSFFAVAGHGKMTVEVPFNY 110
Query: 156 KGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWK 215
G +S ++GG L ++ T ++ C E+I I++DVSNL +GD + ++ I +
Sbjct: 111 VG-DSVGVKQEGGILDTVITQMQLNCLPENIPDSIDIDVSNLHVGDSLHVNQIVLPKGVT 169
Query: 216 LLSKNEKM 223
L +++E++
Sbjct: 170 LTAESEEL 177
>gi|443645400|ref|ZP_21129250.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. syringae B64]
gi|443285417|gb|ELS44422.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. syringae B64]
Length = 204
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 82/183 (44%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEQRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + P K G +++ FV G +
Sbjct: 51 AKLLENDAAYSHIIELNV-GGKKQNVIIKALQRHPAK-------GHVMHADFVRVIAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VP+ F E P +KKGG + T L+ C + + IEVD+S L++GD V +S
Sbjct: 103 LTAIVPIHFLN-EEAP-VKKGGEISHTTTELEVTCLPKDLPEFIEVDLSALEVGDNVHLS 160
Query: 207 DIE 209
+++
Sbjct: 161 ELK 163
>gi|387131035|ref|YP_006293925.1| 50S ribosomal protein L25 [Methylophaga sp. JAM7]
gi|386272324|gb|AFJ03238.1| LSU ribosomal protein L25p [Methylophaga sp. JAM7]
Length = 228
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 83/182 (45%), Gaps = 21/182 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G S R R G++PAVV+ T+++ S +S + Q ++
Sbjct: 7 VHAEARTDEGKGASRRLRRAGKVPAVVYG-------TEKKPVS----ISLDHNQF---IR 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F + L I G + V+L + P +I++ F+ D E+
Sbjct: 53 HLAEEAFYAHILNLVID-GKKNQVVLKDLQRHPAN------DNKIIHADFLRVDAKHEMT 105
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ V + F + PG+K GG + + T ++ C + + IEVDV+ L++ + + +S++
Sbjct: 106 MTVQLHFVNEDKAPGVKAGGQVSHLITEVEIACLPKDLPEYIEVDVAKLEMDEYIHLSEL 165
Query: 209 EV 210
++
Sbjct: 166 DL 167
>gi|383935157|ref|ZP_09988595.1| large subunit ribosomal protein L25 [Rheinheimera nanhaiensis
E407-8]
gi|383703922|dbj|GAB58686.1| large subunit ribosomal protein L25 [Rheinheimera nanhaiensis
E407-8]
Length = 201
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 82/182 (45%), Gaps = 24/182 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R +G S R R + ++PA+++ P++ L + +L
Sbjct: 7 TLNAEVRTDSGKGASRRLRHEDKVPAIIYGGS---------KPAQSITLEHSK-----LL 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K+ F S + + AG ++ + + P K +++++ F + G EL
Sbjct: 53 KAQSFEAFYSHILTINV-AGEEVKAIVKAMQRHPFK-------PKVMHVDFQRVEAGQEL 104
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VPV F E+ +KKGG + ++ C + + IEVD+S++++G + +SD
Sbjct: 105 HTTVPVHFVNEEAA--MKKGGVVVHAANEIEISCLPKDLPEFIEVDMSDVEVGAHLHLSD 162
Query: 208 IE 209
I+
Sbjct: 163 IK 164
>gi|237745396|ref|ZP_04575877.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes HOxBLS]
gi|229378870|gb|EEO28961.1| 50S ribosomal subunit protein L25 [Oxalobacter formigenes HOxBLS]
Length = 205
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 25/201 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R+ G P +V+ + + + + +R+ HS + +
Sbjct: 5 AYTRAEIGTGASRRLRAAGMAPGIVYGG--TSEPVNIKLDHNALFYALKREAFHSSILDL 62
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
E+ G VLL +V K +L++ F D ++ V
Sbjct: 63 EID-------------GKAEKVLLRDFQVHAYK-------PLVLHVDFQRVDANQKITVK 102
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
VP+ F ++ P K G + T L+ C ++ IEVD++NLD+G + +SD+++
Sbjct: 103 VPLHFINEDASPA-AKSGVVHHAATELEISCLPGNLPAFIEVDLANLDVGQTIHLSDLKL 161
Query: 211 HPSWKLLSKNEKMPLCKISAT 231
S +E P+ +SAT
Sbjct: 162 PEGVSATSHDESQPI--VSAT 180
>gi|169830288|ref|YP_001716270.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Desulforudis audaxviator MP104C]
gi|226736307|sp|B1I196.1|RL25_DESAP RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|169637132|gb|ACA58638.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus
Desulforudis audaxviator MP104C]
Length = 211
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 84/211 (39%), Gaps = 22/211 (10%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL- 87
++A PR G R + G IPAV++ +++ +L E + + IL
Sbjct: 6 LKARPRAGRGKGYRNRLKQNGLIPAVIYGKEV-----------GSLLLEVETRAVQDILT 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K+ P + RA +++ D VH ++ F EL
Sbjct: 55 KTGRNALIQLRVEPEKGRAKKYDAIIKD--------VHMHPYKNEFFHVDFHQISLKDEL 106
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V + G S PG+ GG L+ + ++ C +I IEVDVS L IGD + +SD
Sbjct: 107 TTSVNLKLTG--SAPGVTAGGRLEQLIRQVEVSCLPRNIPDHIEVDVSGLGIGDAIHVSD 164
Query: 208 IEVHPSWKLLSKNEKMPLCKISATKLENPEP 238
++ K + + + I+ + E P
Sbjct: 165 LKAPEGVKFETDGDVTVVTLIAPHREEEKAP 195
>gi|15612630|ref|NP_240933.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
halodurans C-125]
gi|68053238|sp|Q9KGJ4.1|RL25_BACHD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|10172679|dbj|BAB03786.1| 50S ribosomal protein L25 [Bacillus halodurans C-125]
Length = 215
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 84/182 (46%), Gaps = 24/182 (13%)
Query: 41 VSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTF 100
V+ + R QG +PAVV+ + ++ Q +S E ++ V S
Sbjct: 17 VTRKIRKQGYVPAVVYG-----------NKTKSQPISVEAVDFLKTVREVGRNGLIS--- 62
Query: 101 PLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVES 160
L++ G+ V++ ++ P+K G L++ F D +E++ +VPV G
Sbjct: 63 -LEVEKGTKHQVMVHDLQMDPLK-------GDYLHIDFFEVDMSSEIEANVPVRLTG--E 112
Query: 161 CPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKN 220
G+ +GG L + + I +I +DVS+L IGD + + D+ + ++++++
Sbjct: 113 ARGVSEGGVLSQLMYEITVRSLPADIPEEITLDVSSLAIGDSIQIRDVRGNVPVQVVNED 172
Query: 221 EK 222
E+
Sbjct: 173 EE 174
>gi|452963747|gb|EME68806.1| ribosomal protein L25 [Magnetospirillum sp. SO-1]
Length = 202
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
L+ + V AD +KV PV F PG+KKGG L ++ C I +I +D
Sbjct: 93 LDFMRVSADHAIHVKV--PVHFANDTKSPGIKKGGVLNVELHEIEITCSPNDIPHEILID 150
Query: 194 VSNLDIGDRVFMSDIEV 210
+S L+IGD V +SD+++
Sbjct: 151 LSGLEIGDSVHLSDLKL 167
>gi|83746829|ref|ZP_00943876.1| LSU ribosomal protein L25P [Ralstonia solanacearum UW551]
gi|207742239|ref|YP_002258631.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia
solanacearum IPO1609]
gi|421899870|ref|ZP_16330233.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia
solanacearum MolK2]
gi|83726414|gb|EAP73545.1| LSU ribosomal protein L25P [Ralstonia solanacearum UW551]
gi|206591076|emb|CAQ56688.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia
solanacearum MolK2]
gi|206593627|emb|CAQ60554.1| 50s ribosomal protein l25 (general stress protein ctc) [Ralstonia
solanacearum IPO1609]
Length = 203
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 81/183 (44%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ PA+++ + +++ + ++ LK
Sbjct: 3 VVAFERSVQGTGASRRLRNAGKTPAIIYG-----------GGAEPKMIELDHNALYHALK 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ +++ AG LL ++ P K +L++ F ++
Sbjct: 52 K---EAFHSSILDIEV-AGKSEKALLRDFQLHPFKQ-------LVLHVDFQRVSATEKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I ++ C + IEVD+ L+IG + +SD
Sbjct: 101 VKVPLHFLNQENAPGVKLGHGIVNHILNDVEVSCLPADLPEFIEVDLGALEIGQTLHISD 160
Query: 208 IEV 210
+++
Sbjct: 161 LKL 163
>gi|374599111|ref|ZP_09672113.1| LSU ribosomal protein L25P [Myroides odoratus DSM 2801]
gi|423324251|ref|ZP_17302092.1| 50S ribosomal protein L25 [Myroides odoratimimus CIP 103059]
gi|373910581|gb|EHQ42430.1| LSU ribosomal protein L25P [Myroides odoratus DSM 2801]
gi|404608585|gb|EKB08045.1| 50S ribosomal protein L25 [Myroides odoratimimus CIP 103059]
Length = 202
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/190 (21%), Positives = 87/190 (45%), Gaps = 26/190 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+ RE G + R+ G +P VV+ + + + K ++ T +H+++
Sbjct: 5 TIKGSERESVGKVSTKALRNAGMVPCVVYGGEQSAIHFTAEEKAFKSLVYT--PNVHTVV 62
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+++ G + +L + P+ + +IL++ F D E+
Sbjct: 63 --------------IELEGGKKINAILQDIQFHPV-------SDKILHIDFYQLFDDKEI 101
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
++VP+ G + G+ GG L LK ++ +EV++SNL++G++++++D
Sbjct: 102 TLEVPIKIAG--NSKGVMAGGVLNINNRKLKVRALPANLPDFVEVNISNLEMGNKLYVTD 159
Query: 208 IEVHPSWKLL 217
I ++KLL
Sbjct: 160 IAT-DNYKLL 168
>gi|344199408|ref|YP_004783734.1| 50S ribosomal protein L25 [Acidithiobacillus ferrivorans SS3]
gi|343774852|gb|AEM47408.1| 50S ribosomal protein L25 [Acidithiobacillus ferrivorans SS3]
Length = 202
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 22/183 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
I A PRE G R S R R G +PAV++ P+ LS E + + +L
Sbjct: 5 AIAAEPREENGRRASRRLRRTGMVPAVLYGDG---------KPALG--LSIEARLLRKLL 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
++ L+ G ++++ D I++H +E +L++ F+ G +
Sbjct: 54 PDDR---AYTSVITLEFPKGKETALIRD------IQMHPYKE--EVLHMDFLRVHAGERV 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VP+ F +C G+K GG L ++ P + IE+D+ L +G+ + +S
Sbjct: 103 HLHVPIHFLNETTCAGIKAGGVLHRALVEVEVEAPVGRLPEAIEIDIGTLLVGESLHLSQ 162
Query: 208 IEV 210
I V
Sbjct: 163 ITV 165
>gi|402783528|ref|YP_006638858.1| 50S ribosomal protein L25/general stress proteinCtc [Helicobacter
cinaedi PAGU611]
gi|386780111|dbj|BAM14969.1| 50S ribosomal protein L25/general stress proteinCtc [Helicobacter
cinaedi PAGU611]
Length = 178
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 9/97 (9%)
Query: 117 GKVLPIKVH---RDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGG--YLK 171
GK L + V +D T I+++ + A G K VPV KG S GLK G ++
Sbjct: 63 GKTLDVVVQEYQKDPVTNTIIHVDLLLAQKGVVSKYKVPVSVKG--SAKGLKNKGVLFIS 120
Query: 172 SIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ R S+K C AE + E+DVS+LD+GD + + D+
Sbjct: 121 TKRISVK--CIAEKLPNTYELDVSDLDVGDSILIRDL 155
>gi|424834857|ref|ZP_18259548.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
sporogenes PA 3679]
gi|365978418|gb|EHN14498.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
sporogenes PA 3679]
Length = 178
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 77/180 (42%), Gaps = 33/180 (18%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R C S + R +G++P V++ ++L + +++S++ +
Sbjct: 9 RNCKNSN---KIRREGKVPGVIYGKNL-----------NNLMFEVGEIELNSMISQIGEH 54
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVD 150
+ G+ VL+ + P+K +H D E + + +
Sbjct: 55 GVTDVNYE-----GADYKVLIKEVQKDPVKKNVIHIDLEN---------VTNSSNLINAE 100
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+P++F G E +KKGG ++ + S+K CP E + I VD+S DIG +SD+E+
Sbjct: 101 IPILFSGDELI--MKKGGVVQKEKNSVKVRCPGEKLPNNIMVDLSQYDIGKTFRISDLEL 158
>gi|319898492|ref|YP_004158585.1| 50S ribosomal protein L25 [Bartonella clarridgeiae 73]
gi|319402456|emb|CBI75997.1| 50S ribosomal protein L25 [Bartonella clarridgeiae 73]
Length = 208
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 34/190 (17%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T +A RE G S + R G IPAV++ +++ P +S K+I
Sbjct: 5 YTFKAEIRERVGKGSSRKLRRNGLIPAVIYG--------NKQPPLA---ISVPYKEI--- 50
Query: 87 LKSVELPFFCSTTFPLQIRAG----SGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVW 140
F+ +I AG + +++ +D K VLP D +++ F+
Sbjct: 51 -------FY-------KIHAGGFRTTVATIEIDKQKIQVLPKDYQLDPIRDFPIHVDFLR 96
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
+ + V +PV F + PG+K+GG L +R ++ A I IE+D+S+ IG
Sbjct: 97 ISATSVVHVHIPVHFLNEDMAPGIKRGGVLNIVRHEIECTALAHAIPEAIEIDLSSYSIG 156
Query: 201 DRVFMSDIEV 210
D + +S +++
Sbjct: 157 DSIHISAVQL 166
>gi|334338783|ref|YP_004543763.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum ruminis DSM 2154]
gi|334090137|gb|AEG58477.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum ruminis DSM 2154]
Length = 212
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 26/200 (13%)
Query: 39 SRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCS 97
SR S R+ R G IPAVV+ K+ D S +S + K++ IL S +
Sbjct: 15 SRSSLREIREAGEIPAVVYG-----KHVDSLS------ISVDGKELKKILNST---TGRN 60
Query: 98 TTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKG 157
T +++ G +V++ + +V P++ I ++ F + ++++ VP+ G
Sbjct: 61 TLISMKVNGGK-QTVMVKNLQVDPLR-------HDIQHVDFQQISEDSKIRTVVPIQLVG 112
Query: 158 VESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLL 217
+ G+ GG ++ S + C I I+VD+S+L+IGD + + D+ V K+L
Sbjct: 113 --TSKGVALGGVIQQELRSAEVECLPSQIPDAIKVDISDLEIGDALTVCDLNVASEIKIL 170
Query: 218 SKNEKMPLCKISATKLENPE 237
+ + + ++A + PE
Sbjct: 171 D-HPRSTVVSVAAARASEPE 189
>gi|302383773|ref|YP_003819596.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brevundimonas
subvibrioides ATCC 15264]
gi|302194401|gb|ADL01973.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Brevundimonas
subvibrioides ATCC 15264]
Length = 236
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 50/92 (54%)
Query: 119 VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLK 178
V+ V D + R L+ + D +K++VP+ F + C ++GG L+ +R S++
Sbjct: 74 VIAKDVQFDPVSDRPLHFDLMRVDAKQTIKIEVPIHFINEDQCKAFRQGGTLEIVRHSVE 133
Query: 179 YLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
L A+HI + VD++ +GD + SD++V
Sbjct: 134 ILVRADHIPEDLVVDLAGHKLGDTLRWSDVKV 165
>gi|399991704|ref|YP_006571944.1| 50S ribosomal protein L25 [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
gi|400753343|ref|YP_006561711.1| 50S ribosomal protein L25 [Phaeobacter gallaeciensis 2.10]
gi|398652496|gb|AFO86466.1| 50S ribosomal protein L25 [Phaeobacter gallaeciensis 2.10]
gi|398656259|gb|AFO90225.1| 50S ribosomal protein L25 [Phaeobacter gallaeciensis DSM 17395 =
CIP 105210]
Length = 209
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
VPV F E PG+K+GG L ++R ++ + A I K+ VD++ L++GD V +S I++
Sbjct: 109 VPVEFINEEEAPGIKRGGVLTAVRPEVELVVTAGDIPEKLVVDLAGLNVGDTVTISAIKL 168
Query: 211 HPSWK 215
K
Sbjct: 169 PEGAK 173
>gi|312958844|ref|ZP_07773363.1| large subunit ribosomal protein L25 [Pseudomonas fluorescens WH6]
gi|311286614|gb|EFQ65176.1| large subunit ribosomal protein L25 [Pseudomonas fluorescens WH6]
Length = 199
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAELRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + R G +L+ FV G +
Sbjct: 51 AKLLENDAAYSHVIELNV-GGKKQNVIIKA-------LQRHPSKGHVLHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E P +KKGG + + ++ C + + IEVD+S L+IG V +S
Sbjct: 103 LTAIVPVHFVG-EEAP-VKKGGEISHVLNEIEVTCLPKDLPEFIEVDLSALEIGAIVHLS 160
Query: 207 DIE 209
D++
Sbjct: 161 DLK 163
>gi|317126792|ref|YP_004093074.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus
cellulosilyticus DSM 2522]
gi|315471740|gb|ADU28343.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus
cellulosilyticus DSM 2522]
Length = 212
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 94/209 (44%), Gaps = 27/209 (12%)
Query: 28 TIQAIPRE-CTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+QA RE GSR++ + R+ G +P V++ + + +K S +++ +
Sbjct: 3 TLQANTREDLRGSRLN-KIRNDGNVPGVIYGKTIGNKPVTVEGSSLLKMIRENGR----- 56
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ F L + G + V++ +V P+K ++++ F AD +E
Sbjct: 57 ----------NGVFKLDVD-GQQTDVMIYDIQVDPLK-------NEVIHVDFYAADMKSE 98
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L DVPV + V G+K GG L+ + + IE+DVS LD+ D + +
Sbjct: 99 LDADVPV--QAVGEAIGVKNGGVLQQSLHEVSVKALPNDLPDSIEIDVSQLDVNDSLQVK 156
Query: 207 DIEVHPSWKLLSKNEKMPLCKISATKLEN 235
D++ +++ + E+ L + T+ N
Sbjct: 157 DLKTSGKYEINNDPEESVLSILPPTEQPN 185
>gi|15834802|ref|NP_296561.1| 50S ribosomal protein L25 [Chlamydia muridarum Nigg]
gi|270284968|ref|ZP_06194362.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
muridarum Nigg]
gi|270288992|ref|ZP_06195294.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
muridarum Weiss]
gi|301336365|ref|ZP_07224567.1| 50S ribosomal protein L25/general stress protein Ctc [Chlamydia
muridarum MopnTet14]
gi|13633862|sp|Q9PLC2.1|RL25_CHLMU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|7190219|gb|AAF39056.1| general stress protein Ctc [Chlamydia muridarum Nigg]
Length = 185
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 81/184 (44%), Gaps = 23/184 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSILKSVE 91
RE V + R QG IPAV+++ + L + D R + L ++E
Sbjct: 8 RETDKKSVIKKIRQQGGIPAVLYSGGKSLANVVIDARV-------------FNKFLSTLE 54
Query: 92 LPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDV 151
ST F L +++ D I+ H T +++L F + E+++++
Sbjct: 55 SGALASTVFTLSYEGREIKALVKD------IQYH--VTTYDVIHLDFEELVEDREVRLNI 106
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
P+ C G+K GG L+ + ++ +C + I P +E+DV +L + + +SDI +
Sbjct: 107 PIRCINTVDCVGVKLGGSLRQVIRYMRVVCKPKDIVPFLELDVQSLGLSQTLKLSDIRIP 166
Query: 212 PSWK 215
K
Sbjct: 167 EGIK 170
>gi|221135305|ref|ZP_03561608.1| 50S ribosomal protein L25/general stress protein Ctc [Glaciecola
sp. HTCC2999]
Length = 209
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 23/182 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
++A R G S R R ++PA+++ D + P + + ++
Sbjct: 7 NLEAQVRTDLGKGASRRLRHADKVPAILYGAD--------KEPVSLTLAHNK------LM 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
++ E F S L + G L+ + P K +IL++ F+ D +
Sbjct: 53 QAQEFEAFYSHVLTLDVD-GEKVEALVKDMQRHPYK-------PKILHVDFLRVDASKAV 104
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+VPV F E+ P +K +GG+ + ++ C + IEVD++N+++G + +S
Sbjct: 105 HTNVPVHFINEETAPAIKTQGGHAEHHVNEIEVSCLPSQLPEFIEVDLTNVELGQTLHLS 164
Query: 207 DI 208
DI
Sbjct: 165 DI 166
>gi|381153148|ref|ZP_09865017.1| ribosomal protein L25, Ctc-form [Methylomicrobium album BG8]
gi|380885120|gb|EIC30997.1| ribosomal protein L25, Ctc-form [Methylomicrobium album BG8]
Length = 200
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 75/178 (42%), Gaps = 22/178 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R +G + R QG +PAV++ + P Q+L ++ +K +
Sbjct: 9 AQARGRSGKNAARGTRRQGNVPAVIYG--------GHQEP---QMLVLNHNEV---IKHL 54
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
E S + I + +VL V R+ +I++L F+ +KV
Sbjct: 55 EHEAVYSHILDVTIDGKTEKAVLKG--------VQRNPAKFQIMHLDFMRVSMSEAIKVH 106
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VP+ F + G KKGG ++ C + IEVD++NLDIG + +SD+
Sbjct: 107 VPLHFVNESTSVGGKKGGVAAHSLVDVEVSCLPGALPEFIEVDLANLDIGASIHLSDL 164
>gi|254416190|ref|ZP_05029945.1| ribosomal protein L25, Ctc-form [Coleofasciculus chthonoplastes PCC
7420]
gi|196177123|gb|EDX72132.1| ribosomal protein L25, Ctc-form [Coleofasciculus chthonoplastes PCC
7420]
Length = 210
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 12/200 (6%)
Query: 40 RVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTT 99
+V R++G P + + L+ + L+ E K ++LK ++ T
Sbjct: 4 KVECHKRAEGSKPKALRREGLIPATLYGHKGAESVALTVEAKAAETLLKQADI---NHTA 60
Query: 100 FPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVE 159
+ I S + GK L +V + +L F +++ +PV G
Sbjct: 61 VQVNIPDLSWN------GKALLREVQTHPWKPILYHLSFFSVASQDTIQISLPVNLVG-- 112
Query: 160 SCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSK 219
+ G+K+GG L+ + T L+ C + I IEVD+SNLDIG + + +I + PS
Sbjct: 113 TAFGVKQGGILEHVMTELQVECAPDSIPEAIEVDISNLDIGASLHVHEI-LLPSGATAMD 171
Query: 220 NEKMPLCKISATKLENPEPA 239
+ + P+ I EP+
Sbjct: 172 DPQRPVVNILGAPTMPAEPS 191
>gi|421746701|ref|ZP_16184478.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
necator HPC(L)]
gi|409774740|gb|EKN56317.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
necator HPC(L)]
Length = 203
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 23/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R+ G+ P +++ + K I H++ K
Sbjct: 5 AFERSVQGTGASRRLRNAGKTPGIIYGG----------TAEPKMIELDHNALFHALKKEA 54
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F S+ L++ G+ LL + ++ P K +L++ F ++ V
Sbjct: 55 ----FHSSILDLEV-GGTTEKALLRAFQMHPFKP-------LVLHVDFQRVSATEKIHVK 102
Query: 151 VPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F E+ PG+K G G + I L+ C + IEVD+ +++G V +SD++
Sbjct: 103 VPLHFMNQETAPGVKLGHGIINHILNELEVSCLPGDLPEFIEVDMGAVELGQTVHLSDLK 162
Query: 210 V 210
+
Sbjct: 163 L 163
>gi|229548761|ref|ZP_04437486.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus
faecalis ATCC 29200]
gi|257421071|ref|ZP_05598061.1| 50S ribosomal protein L25 [Enterococcus faecalis X98]
gi|312951809|ref|ZP_07770700.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0102]
gi|422691026|ref|ZP_16749066.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0031]
gi|422706220|ref|ZP_16763922.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0043]
gi|229306101|gb|EEN72097.1| 50S ribosomal protein L25/general stress protein Ctc [Enterococcus
faecalis ATCC 29200]
gi|257162895|gb|EEU92855.1| 50S ribosomal protein L25 [Enterococcus faecalis X98]
gi|310630212|gb|EFQ13495.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0102]
gi|315154236|gb|EFT98252.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0031]
gi|315156368|gb|EFU00385.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis TX0043]
Length = 202
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 93/192 (48%), Gaps = 39/192 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILST----ERKQIHSILKSVELPFFCSTTFP 101
R +G++PA+V+ QI ST E K + IL+ +T
Sbjct: 22 RHEGKVPAIVYGY---------------QIESTPIYFEEKDLSKILRE----HGANTVIK 62
Query: 102 LQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD--DGTELKVDVPVVFKGVE 159
+ + + ++++ K D TG++L++ F+ + + TE++ +V ++ +
Sbjct: 63 ITVDEKNINTLMS--------KAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--- 111
Query: 160 SCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
G+K GG L +++ T L P + + IEVD++NL+IGD + ++D+ H +++L+
Sbjct: 112 -SAGVKAGGTLAQNLYTVLVAATP-DKLPESIEVDITNLEIGDALTIADLPEHKDYEILT 169
Query: 219 KNEKMPLCKISA 230
E+ + + A
Sbjct: 170 DPEEQLVAIVEA 181
>gi|427430892|ref|ZP_18920606.1| LSU ribosomal protein L25p [Caenispirillum salinarum AK4]
gi|425878383|gb|EKV27100.1| LSU ribosomal protein L25p [Caenispirillum salinarum AK4]
Length = 180
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 95 FCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVV 154
F + F L + G+ +V++ + P+ + + ++ + V AD E+ V VP
Sbjct: 31 FNTRVFTLNVEGGNSETVMVHDVQFNPVT-----DDPQAVDFLRVSAD--KEVVVSVPTS 83
Query: 155 FKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
F E PG+K+GG L +R ++ A + IE D++ LD+ D + +S +++
Sbjct: 84 FVNEEKSPGIKRGGVLNVVRHEVEVKGKATGLPETIECDLTGLDVNDSLHISAVKL 139
>gi|407803838|ref|ZP_11150670.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax
sp. W11-5]
gi|407022248|gb|EKE34003.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax
sp. W11-5]
Length = 212
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 96/210 (45%), Gaps = 28/210 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQ-GRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A R G S R R Q RIP +V+ + Q+++ E +++ +
Sbjct: 7 LHAEGRSDVGKGASRRLRRQEARIPGIVYG-----------GSAEPQMVTLELREL---V 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K++E F S L+I + +VL D + R G ++ F+ D ++
Sbjct: 53 KALENEAFYSHVLTLKIDGKTQQAVLRD--------LQRHPAKGTPMHADFLRVDKTHKI 104
Query: 148 KVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ VP+ F + C G+K+ GG + + ++ C +++ +E+D++++ + V +S
Sbjct: 105 TMQVPLHFLNEDKCVGVKQQGGKITHNASEVEVSCLPQNLPEFLEIDMADVKLDQVVHLS 164
Query: 207 DIEVHPSWKLLS----KNEKMPLCKISATK 232
DI++ +L++ + +P+ + A K
Sbjct: 165 DIKLPKGVELVALTHGADHDLPVVSVHAPK 194
>gi|404399176|ref|ZP_10990760.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fuscovaginae UPB0736]
Length = 197
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R ++PAVV+ D ++P IL+ E I
Sbjct: 5 TLNAEARNDLGKGASRRLRRLASQVPAVVYGGD--------KAPESITILAKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K E S L + G+ +V++ + + P K IL+ FV G +
Sbjct: 51 AKLFEDEAAFSHVIELNV-GGTKQNVIVKALQRHPAKQF-------ILHADFVRVVAGKK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F E+ P +KKGG + + ++ C A+ + IEVD++N ++G + +S
Sbjct: 103 LTATVPVHFIN-EAAP-VKKGGEISHVVNEIEVSCEAKDLPEFIEVDLANAEVGSIIHLS 160
Query: 207 DI 208
D+
Sbjct: 161 DL 162
>gi|187927356|ref|YP_001897843.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia
pickettii 12J]
gi|241661895|ref|YP_002980255.1| 50S ribosomal protein L25/general stress protein Ctc [Ralstonia
pickettii 12D]
gi|309779943|ref|ZP_07674697.1| ribosomal protein L25, Ctc-form [Ralstonia sp. 5_7_47FAA]
gi|404394538|ref|ZP_10986341.1| 50S ribosomal protein L25 [Ralstonia sp. 5_2_56FAA]
gi|226736355|sp|B2UER5.1|RL25_RALPJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|187724246|gb|ACD25411.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ralstonia
pickettii 12J]
gi|240863922|gb|ACS61583.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Ralstonia
pickettii 12D]
gi|308921302|gb|EFP66945.1| ribosomal protein L25, Ctc-form [Ralstonia sp. 5_7_47FAA]
gi|348616617|gb|EGY66117.1| 50S ribosomal protein L25 [Ralstonia sp. 5_2_56FAA]
Length = 208
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 82/183 (44%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ PA+++ + + +++ + ++ LK
Sbjct: 3 VVAFERSVQGTGASRRLRNSGKTPAIIYG-----------AGAEPKLIELDHNALYHALK 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ +++ AG LL ++ P K +L++ F ++
Sbjct: 52 K---EAFHSSILDIEV-AGKVEKALLRDFQLHPFK-------QLVLHVDFQRVSAKEKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I ++ C + IEVD+ L+IG + ++D
Sbjct: 101 VKVPLHFLNQETAPGVKLGHGIVNHILNDVEVSCLPADLPEFIEVDLGTLEIGQTLHIAD 160
Query: 208 IEV 210
+++
Sbjct: 161 LKL 163
>gi|430761937|ref|YP_007217794.1| LSU ribosomal protein L25p [Thioalkalivibrio nitratireducens DSM
14787]
gi|430011561|gb|AGA34313.1| LSU ribosomal protein L25p [Thioalkalivibrio nitratireducens DSM
14787]
Length = 212
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 31/186 (16%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHS 85
I+A PR GS S R R G++P +++ +D + D ++
Sbjct: 6 VIEAEPRLEQGSSASRRLRRAGKLPGILYGGHEDPVTITLDH----------------NA 49
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADD 143
IL++++ F S + + + ++L D + P VH D L+ V AD+
Sbjct: 50 ILQNLKHDAFYSHILTVNLSGKTERAILRDVQRHPFKPTLVHVD--------LLRVSADE 101
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDR 202
++V VP+ F E C G+K GG + + + T ++ C ++ I VDV+ L +G+
Sbjct: 102 A--IRVHVPLHFVNEEICKGVKTGGGMINRQLTEVEVECLPANLPESIVVDVAELGVGET 159
Query: 203 VFMSDI 208
+ +SD+
Sbjct: 160 LHLSDL 165
>gi|359395830|ref|ZP_09188882.1| 50S ribosomal protein L25 [Halomonas boliviensis LC1]
gi|357970095|gb|EHJ92542.1| 50S ribosomal protein L25 [Halomonas boliviensis LC1]
Length = 214
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 74/166 (44%), Gaps = 27/166 (16%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R+ ++PAVV+ + Q +S E+ + K++E F S+ L I
Sbjct: 24 RANQQVPAVVYGGE-----------KGAQSISVEKTAFY---KAIEDESFFSSVIKLMIE 69
Query: 106 AGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPG 163
V+ D + P+ H D F+ D E+ ++VP+ G E+C G
Sbjct: 70 GKEEQVVVRDLQRHPFKPLLTHAD----------FLRVDATHEITMNVPLHVTGEETCVG 119
Query: 164 LK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+K +GG L + + C + + +EVD+S L++G + +SD+
Sbjct: 120 IKDQGGELHVLANEVAISCLPKDLPDYLEVDISALELGTTLHLSDL 165
>gi|255023564|ref|ZP_05295550.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes FSL J1-208]
gi|422408228|ref|ZP_16485189.1| ribosomal protein L25, Ctc-form [Listeria monocytogenes FSL F2-208]
gi|422811090|ref|ZP_16859501.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes FSL J1-208]
gi|313611269|gb|EFR86036.1| ribosomal protein L25, Ctc-form [Listeria monocytogenes FSL F2-208]
gi|378751295|gb|EHY61886.1| 50S ribosomal protein L25/general stress protein Ctc [Listeria
monocytogenes FSL J1-208]
Length = 207
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 75/177 (42%), Gaps = 31/177 (17%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++ RE T R RS+G++P +++ S +S + ++ +
Sbjct: 4 TLEVQKRETTQHSEVTRLRSEGKVPGIIYGYK-----------SENVPVSVDSLELIKAV 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDG 144
+ S T G +VLL +V P+K VH D + D
Sbjct: 53 RDNGRNAVFSVTV-----DGKKLNVLLHEYQVDPLKDVLVHVD----------LLAVDMN 97
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
E++ DV VV G PG+K GG L+ I +K E + IE+D+S+L+IGD
Sbjct: 98 EEVETDVRVVLVG--DAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGD 152
>gi|188997588|ref|YP_001931839.1| 50S ribosomal protein L25/general stress protein Ctc
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188932655|gb|ACD67285.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 197
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G EL ++VPV F G GL+KGG ++ S+ +I KI +DVSNLD+GD +
Sbjct: 98 GLELDIEVPVEFTG--KAIGLEKGGIFEAHLHSILVRTTPRNIPEKIVIDVSNLDLGDVL 155
Query: 204 FMSDIEVHPSWKLLS 218
+ DI+ K+++
Sbjct: 156 HVRDIQAPEGVKIMT 170
>gi|395500688|ref|ZP_10432267.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. PAMC 25886]
Length = 199
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ + ++P +L+ E I
Sbjct: 5 TLNAELRSDLGKGASRRLRRLASLVPAVVYGGE--------KAPESISMLAKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G+ +V++ + + R G +L+ FV G +
Sbjct: 51 AKLLENDAAYSHIIELNV-GGTKQNVIIKA-------LQRHPAKGHVLHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E+ P +KKGG + + ++ C + + IEVD+S +IGD + +S
Sbjct: 103 LTAVVPVHFVG-EAAP-IKKGGEISHVVAEIEVTCLPKDLPEFIEVDLSAAEIGDIIHLS 160
Query: 207 DIE 209
D++
Sbjct: 161 DLK 163
>gi|372268004|ref|ZP_09504052.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alteromonas
sp. S89]
Length = 210
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R + ++PA+++ + P +L + + K++E F S+ L +
Sbjct: 24 RLEAKVPAIIYG--------GKAEPQSVSLLQKD------LFKALESESFYSSVITLSVE 69
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
+ +L D + R +L+ F T++ V VP+ F ES G+K
Sbjct: 70 GKDETVILRD--------LQRHPAKAILLHADFQRVSANTKVHVKVPLHFLNEESSKGVK 121
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
GG + L PA + IEVD+++L++ + +SDI++
Sbjct: 122 AGGIVSHTLNELDITAPASKLPEFIEVDLADLELDGTIHISDIKL 166
>gi|296113815|ref|YP_003627753.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4]
gi|416216089|ref|ZP_11623490.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 7169]
gi|416220560|ref|ZP_11625484.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 103P14B1]
gi|416233982|ref|ZP_11629580.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 12P80B1]
gi|416239551|ref|ZP_11632024.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC1]
gi|416243882|ref|ZP_11634147.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC7]
gi|416245591|ref|ZP_11634574.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC8]
gi|416249283|ref|ZP_11636459.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis CO72]
gi|416256221|ref|ZP_11639588.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis O35E]
gi|421780612|ref|ZP_16217100.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4]
gi|295921509|gb|ADG61860.1| 50S ribosomal protein L25 [Moraxella catarrhalis BBH18]
gi|326562159|gb|EGE12487.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 7169]
gi|326565659|gb|EGE15822.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 12P80B1]
gi|326566227|gb|EGE16379.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 103P14B1]
gi|326567120|gb|EGE17242.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC1]
gi|326568384|gb|EGE18464.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC7]
gi|326572285|gb|EGE22280.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis BC8]
gi|326574299|gb|EGE24246.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis O35E]
gi|326576207|gb|EGE26122.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis CO72]
gi|407812300|gb|EKF83086.1| 50S ribosomal protein L25 [Moraxella catarrhalis RH4]
Length = 223
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G + +VPV +S G K+GG L + ++ C ++ IEVDV+NL IGD +
Sbjct: 101 GQTMNFNVPVNIINEDSSVGKKEGGILTILVNDIEVNCLPRNLPEAIEVDVANLAIGDSI 160
Query: 204 FMSDIEVHPSWKLLSKNE 221
+SD+ + L++ +E
Sbjct: 161 HLSDVTLPNEVTLVTHDE 178
>gi|338997717|ref|ZP_08636410.1| 50S ribosomal protein L25 [Halomonas sp. TD01]
gi|338765399|gb|EGP20338.1| 50S ribosomal protein L25 [Halomonas sp. TD01]
Length = 213
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R+ ++PAVV+ + Q +S E+ + K++E F S+ L I
Sbjct: 24 RANQQVPAVVYGGE-----------KGAQSISVEKTAFY---KAIEDESFFSSVIKLVID 69
Query: 106 AGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPG 163
V+ D + P+ H D F+ D E+ ++VP+ G E C G
Sbjct: 70 GTEEQVVVRDLQRHPFKPLLTHAD----------FLRVDATHEITMNVPLHVVGEEKCVG 119
Query: 164 LK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+K +GG L ++ + C + + +EVD+SN+++G + +SD+
Sbjct: 120 IKDQGGELHTLANEVAISCLPKDLPDFLEVDISNVELGTTLHLSDL 165
>gi|162146757|ref|YP_001601216.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter diazotrophicus PAl 5]
gi|209543256|ref|YP_002275485.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter diazotrophicus PAl 5]
gi|189042360|sp|A9HC01.1|RL25_GLUDA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|161785332|emb|CAP54878.1| 50S ribosomal protein L25 [Gluconacetobacter diazotrophicus PAl 5]
gi|209530933|gb|ACI50870.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Gluconacetobacter diazotrophicus PAl 5]
Length = 206
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G + V+V +VF G + PG+K+GG L +R +++ +I VD+S LDI D V
Sbjct: 100 GERVHVEVRIVFTGEDKSPGIKRGGVLNIVRHTVEVSADPANIPESFTVDLSQLDIHDNV 159
Query: 204 FMSDIE 209
D++
Sbjct: 160 RWDDLQ 165
>gi|85818337|gb|EAQ39497.1| 50S ribosomal protein L25, Ctc-form [Dokdonia donghaensis MED134]
gi|376316864|emb|CCG00244.1| 50S ribosomal protein L25 [uncultured Dokdonia sp.]
Length = 208
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 39/187 (20%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+IQ RE G + + R+ G +P VV+ D + IH
Sbjct: 5 SIQGSKRESVGKKATKALRNAGLVPCVVYGGD---------------------EPIH--F 41
Query: 88 KSVELPFFC------STTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWA 141
+ EL F + T +++ + ++L D I+ H T RIL++ F
Sbjct: 42 SAPELAFKNLVYTPDAHTVEIELDGVTVQAILQD------IQFH--PVTDRILHIDFYQI 93
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
+G E+ +++PV F G + G++ GG L+ L+ + + +E D++NL IG+
Sbjct: 94 FEGKEVTMNIPVHFTG--NSKGVRNGGVLRKTNRVLRVKALPKDLPDFLEADITNLKIGN 151
Query: 202 RVFMSDI 208
++++ ++
Sbjct: 152 KLYIGEL 158
>gi|386346807|ref|YP_006045056.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6578]
gi|339411774|gb|AEJ61339.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6578]
Length = 209
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 87/196 (44%), Gaps = 29/196 (14%)
Query: 46 RSQGRIPAVVFA-QDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQI 104
R +G+IPAV++ +D + D R R H + + L +
Sbjct: 23 RREGKIPAVIYGGKDQVPVALDAREFHRT---------FHGTVAE-------NVIVDLSL 66
Query: 105 RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGL 164
VL+ + PI+ G+ ++L F+ + +LK VP+ +G + G+
Sbjct: 67 EGKETRQVLIKDYQYDPIR-------GQYIHLDFMEINPEKKLKTHVPIHLEG--TPEGV 117
Query: 165 KKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMP 224
KKGG L+ L+ C + + I +D+S+L++GD + + DI+ ++L+ ++
Sbjct: 118 KKGGLLEFFVQELEVTCLPKDLPEAIVLDISSLEVGDSLHVQDIQAPDGVEILNPPDQTV 177
Query: 225 LC---KISATKLENPE 237
+ +S +E PE
Sbjct: 178 VAVGHAVSEVVVETPE 193
>gi|416156555|ref|ZP_11604594.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 101P30B1]
gi|416228010|ref|ZP_11627362.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 46P47B1]
gi|326564476|gb|EGE14702.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 46P47B1]
gi|326574883|gb|EGE24813.1| 50S ribosomal protein L25/general stress protein Ctc [Moraxella
catarrhalis 101P30B1]
Length = 223
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 42/78 (53%)
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G + +VPV +S G K+GG L + ++ C ++ IEVDV+NL IGD +
Sbjct: 101 GQTMNFNVPVNIINEDSSVGKKEGGILTILVNDIEVNCLPRNLPEAIEVDVANLAIGDSI 160
Query: 204 FMSDIEVHPSWKLLSKNE 221
+SD+ + L++ +E
Sbjct: 161 HLSDVTLPNEVTLVTHDE 178
>gi|422297072|ref|ZP_16384716.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
avellanae BPIC 631]
gi|407991614|gb|EKG33432.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
avellanae BPIC 631]
Length = 159
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 131 GRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKI 190
G +L+ FV G +L VPV F G E P +KKGG + + + L+ C + + I
Sbjct: 43 GHVLHADFVRVVAGQKLTAIVPVHFIG-EEAP-VKKGGEVSHVTSELEVSCLPKDLPEFI 100
Query: 191 EVDVSNLDIGDRVFMSDI 208
EVDVS L+IG V +SD+
Sbjct: 101 EVDVSALEIGSIVHLSDV 118
>gi|326389777|ref|ZP_08211342.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter ethanolicus JW 200]
gi|325994259|gb|EGD52686.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter ethanolicus JW 200]
Length = 202
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 89/192 (46%), Gaps = 29/192 (15%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+I+AI R+ TG + R ++QG IPA+++ K P L+ E + +L
Sbjct: 5 SIEAIKRD-TGKNAARRLKNQGYIPAILYG-----KGMAESIP-----LAVEYNALQRLL 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + I GS + ++ ++ D G+I+++ F E+
Sbjct: 54 QKHGRNVLLNV-----IVDGSTHNAVIK-------EIQEDTLKGKIIHVDFQRVSMYEEI 101
Query: 148 KVDVPVVFKGVESCPGL--KKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ VP+ F+G+ GL +GG ++ L + I +I VD+SNL+IGD +F+
Sbjct: 102 EATVPLKFEGI----GLIESRGGIVQHQLWELTVESLPDKIPQEIVVDLSNLEIGDTLFV 157
Query: 206 SDIEVHPSWKLL 217
DI+V K++
Sbjct: 158 KDIQVPEGVKVV 169
>gi|258513562|ref|YP_003189784.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum acetoxidans DSM 771]
gi|257777267|gb|ACV61161.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfotomaculum acetoxidans DSM 771]
Length = 219
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 22/214 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
++ A PRE G S + S+G +PAV++++ + K L E + + +L
Sbjct: 11 SLDAYPREGCGKGYSNKLFSKGYMPAVLYSKSIGSKP-----------LELEARALEDVL 59
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
KS ++ L +++G G DS KV+ + L+ F+ +
Sbjct: 60 KS---KTGRNSVIDLHLKSGDGE----DSYKVMVKDLQYHPIRRSYLHADFLEISLTDRV 112
Query: 148 KVDVPVVFKGVESCPGL-KKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++ VV G PG+ ++GG L I + C I I VDVS L IGD V +
Sbjct: 113 QIAAKVVLVG--EAPGVAEEGGILDQIIREVGVKCLPGSIPDIITVDVSKLYIGDSVAVM 170
Query: 207 DIEVHPSWKLLSKNEKMPLCKISATKLENPEPAV 240
D++ P ++L+ +E + + ++ + EP +
Sbjct: 171 DLQAGPDIEILA-DEDLVVARVIPPQSLQEEPGI 203
>gi|333977661|ref|YP_004515606.1| 50S ribosomal protein L25 [Desulfotomaculum kuznetsovii DSM 6115]
gi|333821142|gb|AEG13805.1| 50S ribosomal protein L25 [Desulfotomaculum kuznetsovii DSM 6115]
Length = 211
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 20/190 (10%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R G R +QG+IPAVV+ + + + + + K IL+ E +
Sbjct: 10 RTGRGKGYRHRLAAQGKIPAVVYGKAIGNIPVEVELRALKNILAGEGGR----------- 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+T L+I G G KVL ++ D G +++ F ++ VPV
Sbjct: 59 ---NTLINLKI-TGEGQE---RQDKVLIKELQYDSLRGELIHADFQQVSLTEKITTTVPV 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
+G G+K+GG L+ L+ C I I +D+S L++GD V ++D+ V
Sbjct: 112 ELEG--EPVGVKQGGILQQQLRELEISCLPADIPEVITMDISGLEMGDTVHVADLPVPAG 169
Query: 214 WKLLSKNEKM 223
K+L+ E++
Sbjct: 170 VKVLNDPEEV 179
>gi|288574798|ref|ZP_06393155.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Dethiosulfovibrio peptidovorans DSM 11002]
gi|288570539|gb|EFC92096.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Dethiosulfovibrio peptidovorans DSM 11002]
Length = 207
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/183 (20%), Positives = 81/183 (44%), Gaps = 20/183 (10%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R+ G R R G IPAV++ P ++ +S + K L ++
Sbjct: 11 RDAVGKEACGRLRRSGYIPAVLYG------------PDYREAVSVQVKA-EDFLPNIRGT 57
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+ + F + GS ++ ++R+ + +L++ F G ++ V VP+
Sbjct: 58 HWNTLKFDAVLPDGSSEMCIIRD-------MNRNYVSDDVLHVDFYQLVKGHKVSVKVPI 110
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
G E+C G+K GG L+ ++ I + ++V ++++GD + ++D+++ S
Sbjct: 111 EIVGKETCAGVKAGGLLEQRILDIEINVLPREIPENVVLNVESMNVGDSITLADLDLPES 170
Query: 214 WKL 216
++
Sbjct: 171 AEM 173
>gi|407892573|ref|ZP_11151603.1| 50S ribosomal protein L25/general stress protein Ctc
[Diplorickettsia massiliensis 20B]
Length = 215
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 83/184 (45%), Gaps = 26/184 (14%)
Query: 22 TTSYYHTIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTER 80
++S+ T Q R+ G+R S R R + +IPA+++ P LS +
Sbjct: 2 SSSFELTAQT--RKAFGTRASRRLRRLENQIPAILYGAG---------EPPLAITLSHNQ 50
Query: 81 KQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVW 140
+LK++E F S + + + +VL D + R RIL++ +
Sbjct: 51 -----VLKALENEAFYSHILTITVDGQAQKAVLKD--------LQRHAFKPRILHMDLLR 97
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
++ + VP+ FKG PG+K+ GG L + S++ C + + IEVDVS L +
Sbjct: 98 VTAKEKITMSVPLHFKGENVAPGVKEAGGVLAHLLNSVEVRCLPDALPEYIEVDVSRLGL 157
Query: 200 GDRV 203
+ +
Sbjct: 158 DEAI 161
>gi|406915162|gb|EKD54270.1| 50S ribosomal protein L25 [uncultured bacterium]
Length = 238
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R+ G S R R ++PAV++ + + L+ + + L
Sbjct: 8 LEADVRQDIGKGASRRLRHTDKVPAVIYG-----------AGEAPESLTLDHNKA---LN 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F S L++ G + KV+ V R RI ++ F+ +L
Sbjct: 54 ALSHEAFYSHILTLKV--GKKNE------KVILKAVQRHPAKPRIAHIDFLRIRADQKLH 105
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ VP F G E+ PGLK+GG + ++ +C + IE+D SNL + + +S++
Sbjct: 106 MHVPFHFLGEENAPGLKEGGAFSHLMNDVEVVCLPADLPEFIEIDASNLLLDQSIHLSEL 165
Query: 209 EV 210
++
Sbjct: 166 KL 167
>gi|149921897|ref|ZP_01910341.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Plesiocystis
pacifica SIR-1]
gi|149817250|gb|EDM76727.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Plesiocystis
pacifica SIR-1]
Length = 201
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%), Gaps = 19/190 (10%)
Query: 22 TTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERK 81
T + + + A R TG VS + R+QG IPAV++ + + + R+
Sbjct: 2 TETEFGKLNASVRSNTGKGVSRKLRAQGLIPAVMYG----------KGEGNVMLTVSPRE 51
Query: 82 QIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWA 141
++ +L F + T + A S ++ + PI RDE L++ F+
Sbjct: 52 LRRAMDPQRKLNTFFTLTIQDEGGASSQEQCVVTDYQADPI---RDE----FLHIDFLRV 104
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
D +E+ +PV + G G+ GG L++ + + + + K+ VDVS LD G
Sbjct: 105 DPNSEIVTKIPVEYIG--RAVGVVAGGKLRTYQRTTRVAAKPAEVPVKLTVDVSPLDAGS 162
Query: 202 RVFMSDIEVH 211
+ M D+ +
Sbjct: 163 TLRMKDLNLE 172
>gi|71909343|ref|YP_286930.1| 50S ribosomal protein L25 [Dechloromonas aromatica RCB]
gi|109893357|sp|Q479M1.1|RL25_DECAR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71848964|gb|AAZ48460.1| LSU ribosomal protein L25P [Dechloromonas aromatica RCB]
Length = 203
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R ++P +V+ + Q + + +L
Sbjct: 5 LNAQARTLQGTGASRRLRHAAKVPGIVYG-----------GAAAPQSIEVDHN---DLLL 50
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ F S+ L I G VLL +V K +L++ F D EL
Sbjct: 51 KLKKEAFHSSIINLIID-GKKEQVLLRDTQVHAYK-------PLVLHVDFQRVDATHELH 102
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E PG+K GG + + T + C A + IEVD+S+L IG + +S
Sbjct: 103 VKVPLHFVNEEVAPGVKLNGGLVNHVMTEVDIQCLAGDLPEFIEVDLSSLKIGGSIHLSQ 162
Query: 208 IEV 210
+++
Sbjct: 163 LKL 165
>gi|402817159|ref|ZP_10866748.1| 50S ribosomal protein L25 [Paenibacillus alvei DSM 29]
gi|402505265|gb|EJW15791.1| 50S ribosomal protein L25 [Paenibacillus alvei DSM 29]
Length = 206
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 81/190 (42%), Gaps = 29/190 (15%)
Query: 34 RECTGSRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVEL 92
R +R S R+ R +GRIP VV+ D+ S ++ R ++
Sbjct: 14 RRTDFTRSSLRELRQKGRIPGVVYGADMESTALHVDSREFAKLARVGRTEV--------- 64
Query: 93 PFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVP 152
F LQI L+ V D G ++ F +++ VP
Sbjct: 65 -------FQLQIEGMKPVQALIKD------VVKGD---GAYAHIDFQQVSANHPIRIHVP 108
Query: 153 VVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
+ + G + G+KKGG L++ T+L+ H+ I+VD+S L IG ++ + D++V
Sbjct: 109 IEYVG--TPVGVKKGGILQTQETNLEIEGLPAHLPSVIQVDISTLRIGGKLLVEDVQVPE 166
Query: 213 SWKLLS-KNE 221
L+S KNE
Sbjct: 167 HIHLISHKNE 176
>gi|168179611|ref|ZP_02614275.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
botulinum NCTC 2916]
gi|226950546|ref|YP_002805637.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
botulinum A2 str. Kyoto]
gi|182669554|gb|EDT81530.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
botulinum NCTC 2916]
gi|226843949|gb|ACO86615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
botulinum A2 str. Kyoto]
Length = 178
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 33/180 (18%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R C S RD G++P +++ ++L + +++S++ V
Sbjct: 9 RNCKNSNKVRRD---GKVPGIIYGKNL-----------NNLMFEVGEIELNSMISQVGEH 54
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVD 150
+ G+ VL+ + P+K +H D E + + +
Sbjct: 55 GVTDINY-----EGTDYKVLIKEVQKDPVKKNVIHIDLEN---------VTNSSNLINAE 100
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+P++F G E +KKGG ++ + S+K CP E + I VD+S DIG +SD+E+
Sbjct: 101 IPILFSGDELI--MKKGGVVQKEKNSVKVRCPEEKLPNNIMVDLSQYDIGKTFRISDLEL 158
>gi|317120947|ref|YP_004100950.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermaerobacter marianensis DSM 12885]
gi|315590927|gb|ADU50223.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermaerobacter marianensis DSM 12885]
Length = 207
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 86/196 (43%), Gaps = 26/196 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
++A+PRE +R R R +G IPAV++ PS + + ++ H +L
Sbjct: 4 VLRAVPREPGHAR---RVRREGGIPAVLYG------------PSGNFPVRLDAREFHRLL 48
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
S + +R G + S V ++ H G +L++ + +
Sbjct: 49 ASGRARGVLTVEL---VRDGQTRQL---SAMVKELQWH--PARGDLLHVDLFEVREDEPV 100
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VP+ G E +K G ++ L+ C +I P +E DV+NL +G+ V + D
Sbjct: 101 RAVVPIALTGTEEA---EKRGIVQHQLAELEIECLPRYIPPVVEADVANLPVGEEVRVKD 157
Query: 208 IEVHPSWKLLSKNEKM 223
+ V P ++L+ +++
Sbjct: 158 LVVPPQVRVLNDPDEI 173
>gi|329890236|ref|ZP_08268579.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta ATCC 11568]
gi|328845537|gb|EGF95101.1| ribosomal protein L25, Ctc-form [Brevundimonas diminuta ATCC 11568]
Length = 205
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 42/65 (64%)
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
E+K+++PV F + P ++GG L+ +R +++ + A+ I ++ VD+ +IG+ + +
Sbjct: 101 EIKIEIPVAFVNADEAPYTRQGGMLEVVRHTVEIMVRADRIPAELVVDLKGREIGENIRI 160
Query: 206 SDIEV 210
SDI++
Sbjct: 161 SDIQL 165
>gi|29655127|ref|NP_820819.1| 50S ribosomal protein L25 [Coxiella burnetii RSA 493]
gi|153206163|ref|ZP_01945426.1| ribosomal protein L25, Ctc-form [Coxiella burnetii 'MSU Goat Q177']
gi|154705751|ref|YP_001423504.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella
burnetii Dugway 5J108-111]
gi|161830242|ref|YP_001597664.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella
burnetii RSA 331]
gi|165918238|ref|ZP_02218324.1| ribosomal protein L25, Ctc-form [Coxiella burnetii Q321]
gi|212211868|ref|YP_002302804.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella
burnetii CbuG_Q212]
gi|212217813|ref|YP_002304600.1| 50S ribosomal protein L25/general stress protein Ctc [Coxiella
burnetii CbuK_Q154]
gi|71153140|sp|Q83AP1.1|RL25_COXBU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189042351|sp|A9KF12.1|RL25_COXBN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189042352|sp|A9NAT6.1|RL25_COXBR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736301|sp|B6J9D8.1|RL25_COXB1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736302|sp|B6J329.1|RL25_COXB2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|29542396|gb|AAO91333.1| LSU ribosomal protein L25P [Coxiella burnetii RSA 493]
gi|120577293|gb|EAX33917.1| ribosomal protein L25, Ctc-form [Coxiella burnetii 'MSU Goat Q177']
gi|154355037|gb|ABS76499.1| LSU ribosomal protein L25P [Coxiella burnetii Dugway 5J108-111]
gi|161762109|gb|ABX77751.1| ribosomal protein L25, Ctc-form [Coxiella burnetii RSA 331]
gi|165918098|gb|EDR36702.1| ribosomal protein L25, Ctc-form [Coxiella burnetii Q321]
gi|212010278|gb|ACJ17659.1| LSU ribosomal protein L25P [Coxiella burnetii CbuG_Q212]
gi|212012075|gb|ACJ19455.1| LSU ribosomal protein L25P [Coxiella burnetii CbuK_Q154]
Length = 244
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 85/180 (47%), Gaps = 27/180 (15%)
Query: 34 RECTGSRVSARDRS-QGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVEL 92
RE TG + R R + ++P V+ ++P +L + +LK++E
Sbjct: 13 REFTGKSAARRMRRFEDKVPGTVYGAG--------KAPQSITLLQKD------LLKALE- 57
Query: 93 PFFCSTTFP--LQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
+TF L ++ G KV+ + R +I+++ F +L ++
Sbjct: 58 ---SESTFSSILTLKVGDKKQ------KVILKALQRHHTKPKIVHIDFQRIKASEKLIMN 108
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
VP+ F G + CPG++ GG + +++ ++ C + IEVD+S+L + + V +S++++
Sbjct: 109 VPLHFLGEDDCPGVEAGGVVSHLQSEVEIRCLPADLPEYIEVDLSHLQLDESVHLSNLKL 168
>gi|220932954|ref|YP_002509862.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Halothermothrix orenii H 168]
gi|254801051|sp|B8D015.1|RL25_HALOH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|219994264|gb|ACL70867.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Halothermothrix orenii H 168]
Length = 218
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 82/183 (44%), Gaps = 24/183 (13%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A R+ TG V+ + R G IP V++ + R P Q L+ + K ++ +
Sbjct: 4 YNLKAEVRKDTGKGVARKLRRNGLIPGVIYGK--------TRKP---QPLAVDAKDLNKV 52
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ T + ++V+ D + RD G IL++ F +
Sbjct: 53 VGG---NAILDMTLVDGDKEEKETAVVKD--------LQRDPVQGNILHVDFQHISMTDK 101
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L V VPV G + G+ GG L+ + ++ C I +IEVD+++L +GD + +
Sbjct: 102 LTVSVPVHIVG--NARGVVAGGVLQQLAREIEVECLPTDIPDEIEVDITDLGLGDSLSVG 159
Query: 207 DIE 209
DIE
Sbjct: 160 DIE 162
>gi|116626137|ref|YP_828293.1| 50S ribosomal protein L25 [Candidatus Solibacter usitatus
Ellin6076]
gi|116229299|gb|ABJ88008.1| LSU ribosomal protein L25P [Candidatus Solibacter usitatus
Ellin6076]
Length = 227
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 83/194 (42%), Gaps = 28/194 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHS 85
T+ A R G + R R G IPAVV+ Q+ + R
Sbjct: 6 TVPAEIRNSRGKNEARRTRMAGNIPAVVYGAYQEPVSVAVSPR----------------D 49
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
I+K + +T F L I G + V++ +V PIK +L+ F D
Sbjct: 50 IVKIIRSNTGLNTIFTLAIAGGETTPVMIVDRQVDPIK-------STLLHADFKRVDLTK 102
Query: 146 ELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
++V VPV +G G+K +GG L+ I +++ C + I K V+VS L IG
Sbjct: 103 RIRVSVPVFTEG--EPAGVKVQGGLLEIISRAIEIECLPDDIPEKFVVNVSELMIGQSKR 160
Query: 205 MSDIEVHPSWKLLS 218
SD+ + S KL+S
Sbjct: 161 GSDVALSGSMKLVS 174
>gi|337286884|ref|YP_004626357.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermodesulfatator indicus DSM 15286]
gi|335359712|gb|AEH45393.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermodesulfatator indicus DSM 15286]
Length = 208
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 78/180 (43%), Gaps = 20/180 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R TG ++ + R+QG +P V++ + P + E K+ +
Sbjct: 6 LTATIRPKTGKEIARKLRAQGLVPGVIYGPE--------TEPVPLAVKLNELKKYLYRYR 57
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+L F + + S L V ++ H T IL++ F E++
Sbjct: 58 DEQLIFNLTLE--------NNGSTLKKIALVKDLQYH--PVTDEILHVDFYEISMEREVE 107
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V+VP+ G G++ GG+L+ + ++ C I KIEVDVS LD GD + + D+
Sbjct: 108 VEVPIELVG--KAKGVETGGHLQQLLQTMTVACLPGLIPDKIEVDVSELDQGDVIHVKDL 165
>gi|319403819|emb|CBI77403.1| 50S ribosomal protein L25 [Bartonella rochalimae ATCC BAA-1498]
Length = 208
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 81/186 (43%), Gaps = 26/186 (13%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T +A RE G S R G IPAV++ D++ P +S K I
Sbjct: 5 YTFRAEIRERVGKGSSRELRRNGLIPAVIYG--------DKQPP---LAISVPYK---DI 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDG 144
+ F +T +++ +D K VLP D +++ F+
Sbjct: 51 FHKIHAGGFRTTV----------ATIEIDQQKIQVLPKDYQLDPVRDFPIHVDFLRISAK 100
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
+ + V +PV F + PG+K+GG L +R ++ A I IE+D+S+ IGD +
Sbjct: 101 SIVHVHIPVHFLNEDIAPGIKRGGVLNIVRHEIECTALAHAIPEAIEIDLSSYSIGDSIH 160
Query: 205 MSDIEV 210
+S +++
Sbjct: 161 ISAVQL 166
>gi|77464403|ref|YP_353907.1| 50S ribosomal protein L25 [Rhodobacter sphaeroides 2.4.1]
gi|126463245|ref|YP_001044359.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides ATCC 17029]
gi|221640293|ref|YP_002526555.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides KD131]
gi|332559294|ref|ZP_08413616.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides WS8N]
gi|429206040|ref|ZP_19197308.1| LSU ribosomal protein L25p [Rhodobacter sp. AKP1]
gi|109893390|sp|Q3IZM8.1|RL25_RHOS4 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166223710|sp|A3PMM1.1|RL25_RHOS1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|254801059|sp|B9KMG3.1|RL25_RHOSK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|77388821|gb|ABA80006.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides 2.4.1]
gi|126104909|gb|ABN77587.1| LSU ribosomal protein L25P [Rhodobacter sphaeroides ATCC 17029]
gi|221161074|gb|ACM02054.1| 50S ribosomal protein L25 [Rhodobacter sphaeroides KD131]
gi|332277006|gb|EGJ22321.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodobacter
sphaeroides WS8N]
gi|428190761|gb|EKX59305.1| LSU ribosomal protein L25p [Rhodobacter sp. AKP1]
Length = 203
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 85/204 (41%), Gaps = 26/204 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSI 86
QA R TG + + R +G +P +V+ Q+ L N + +
Sbjct: 8 FQAEVRTGTGKGAARQARREGYVPGIVYGGGQEPLSINV----------------PYNDL 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
L ++ F T F L++ V+ V RD ++ F+ +
Sbjct: 52 LNRLKKGRFLQTLFNLKVEGQEDVRVICRG-------VQRDVVKDLPTHVDFMRLRRTSR 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ + + V F+ + PGLK+GG L +R ++ A I + VD+++ IGD + ++
Sbjct: 105 VNLFIHVTFENHDKAPGLKRGGTLTVVRPEVELEVTAGDIPDHLTVDLTDRQIGDVIHIN 164
Query: 207 DIEVHPSWKLLSKNEKMPLCKISA 230
DI++ P + + N + ISA
Sbjct: 165 DIKL-PEGAVPTINRNFVIANISA 187
>gi|398831927|ref|ZP_10590096.1| ribosomal protein L25, Ctc-form [Herbaspirillum sp. YR522]
gi|398224089|gb|EJN10414.1| ribosomal protein L25, Ctc-form [Herbaspirillum sp. YR522]
Length = 201
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I PR+ G+ S R R G+ P +V+ N ++ + ++ LK
Sbjct: 3 IIGFPRKEQGTGASRRLRIAGQTPGIVYGGTAAPVN-----------IALDHNALYHALK 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F ++ L+I G VLL +V K +L++ F D +L
Sbjct: 52 K---ETFHASILDLEIE-GKVEQVLLRDFQVHAFK-------QLVLHVDFQRVDASQKLH 100
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VP+ F E P +K G + +++ L C +++ IEVD++NL IG + ++D
Sbjct: 101 TKVPLHFVNAEISPAVKLSSGIVSHVQSELDVQCLPKNLPEFIEVDLANLQIGQSIHLAD 160
Query: 208 IEV 210
+++
Sbjct: 161 LKL 163
>gi|66044196|ref|YP_234037.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. syringae B728a]
gi|75503328|sp|Q4ZXX3.1|RL25_PSEU2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|63254903|gb|AAY35999.1| LSU ribosomal protein L25P [Pseudomonas syringae pv. syringae
B728a]
Length = 204
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEQRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + P K G +++ FV G +
Sbjct: 51 AKLLENDAAYSHIIELNV-GGKKQNVIIKALQRHPAK-------GHVMHADFVRVIAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VP+ F E P +KKGG + T L+ C + + IEVD+ +L++GD V +S
Sbjct: 103 LTAIVPIHFLN-EEAP-VKKGGEISHTTTELEVTCLPKDLPEFIEVDLGSLEVGDNVHLS 160
Query: 207 DIE 209
+++
Sbjct: 161 ELK 163
>gi|298368586|ref|ZP_06979904.1| ribosomal protein L25, Ctc-form [Neisseria sp. oral taxon 014 str.
F0314]
gi|298282589|gb|EFI24076.1| ribosomal protein L25, Ctc-form [Neisseria sp. oral taxon 014 str.
F0314]
Length = 190
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/210 (22%), Positives = 100/210 (47%), Gaps = 27/210 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQI-LSTERKQIHS 85
+ IQA RE G+ S R R +G+IPA+++ +D +K I +S + K +
Sbjct: 3 YEIQAAIREQQGTGASRRLRREGQIPAILYGED------------QKPISISVDHK---T 47
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
I ++E F + L + G V++ ++ P + + ++ F
Sbjct: 48 IFYALEKESFHTALIKLALN-GKTYDVIVRDFQMHPFR-------REVQHIDFQVVKANQ 99
Query: 146 ELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
L++ VP+ E+ +K +GG + + TS++ L +I +++D ++++ GD +
Sbjct: 100 LLRIRVPLHIVNAENSQAVKLQGGRVSLLNTSVEILALPSNIPAFLDLDCASVEAGDILH 159
Query: 205 MSDIEVHPSWKLLS--KNEKMPLCKISATK 232
+SDI++ + +S +NE + + ++ K
Sbjct: 160 LSDIKLPEGVESVSLKRNENLAVATVTGKK 189
>gi|237799721|ref|ZP_04588182.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331022576|gb|EGI02633.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. oryzae str. 1_6]
Length = 204
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEQRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + P K G +L+ FV G +
Sbjct: 51 AKLLENDAAYSHIIELNV-GGKKQNVIIKALQRHPAK-------GHVLHADFVRVIAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VP+ F E P +KKGG + T L+ C + + IEVD+ L++GD V +S
Sbjct: 103 LTAIVPIHFLN-EEAP-VKKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLS 160
Query: 207 DIE 209
+++
Sbjct: 161 ELK 163
>gi|433679030|ref|ZP_20510814.1| large subunit ribosomal protein L25 [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430815854|emb|CCP41359.1| large subunit ribosomal protein L25 [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 215
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 78/185 (42%), Gaps = 23/185 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I+ RE G S R R G IPA+V+ +L P Q+ E +
Sbjct: 5 HEIKVQRREVEGKGASRRLRRDGLIPAIVYGGEL--------KPVNIQLNHNE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ + +F S+ L + D KVL + R IL++ F +D
Sbjct: 51 WLASQNDWFYSSILSLSLNG--------DIQKVLLRDMQRHPFKQLILHIDFQRVNDNEA 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L VP+ F ++ P K + + ++ +C + + +EVD+S L +GD + +
Sbjct: 103 LHASVPLHFLNEDASPAGKSAEVVVTHELNEIQVVCLPKDLPEFVEVDLSALSVGDVIHL 162
Query: 206 SDIEV 210
SD+++
Sbjct: 163 SDLKL 167
>gi|399926744|ref|ZP_10784102.1| 50S ribosomal protein L25/general stress protein Ctc [Myroides
injenensis M09-0166]
Length = 202
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 93/205 (45%), Gaps = 27/205 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+ RE G + R+ G +P V++ P+ + E K ++
Sbjct: 5 TIKGSERESVGKVSTKALRNAGMVPCVLYGG---------TEPAVH--FAAEEKAFKGLV 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + T + + G + +L + P+ T IL++ F D E+
Sbjct: 54 YTPNV-----HTVVIDLENGKKFNAILQDIQFHPV-------TDEILHIDFYQLHDDKEI 101
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
++VPV K V + G+ GG L LK ++ +EV++SNLD+G++++++D
Sbjct: 102 TLEVPV--KVVGNSKGVMAGGVLNLNLRKLKVKALPANLPDFVEVNISNLDMGNKLYVTD 159
Query: 208 IEVHPSWKLLSKNEKMPLCKISATK 232
+ V ++KLL + + +C++ ++
Sbjct: 160 V-VANNYKLLHPDNTV-VCQVRISR 182
>gi|422638715|ref|ZP_16702146.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae Cit 7]
gi|440744594|ref|ZP_20923897.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae BRIP39023]
gi|330951110|gb|EGH51370.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae Cit 7]
gi|440374012|gb|ELQ10755.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae BRIP39023]
Length = 204
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEQRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + P K G +++ FV G +
Sbjct: 51 AKLLENDAAYSHIIELNV-GGKKQNVIIKALQRHPAK-------GHVMHADFVRVIAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VP+ F E P +KKGG + T L+ C + + IEVD+ L++GD V +S
Sbjct: 103 LTAIVPIHFLN-EEAP-VKKGGEISHTTTELEVTCLPKDLPEFIEVDLGTLEVGDNVHLS 160
Query: 207 DIE 209
+++
Sbjct: 161 ELK 163
>gi|167036980|ref|YP_001664558.1| 50S ribosomal protein L25/general stress protein Ctc
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|167039691|ref|YP_001662676.1| 50S ribosomal protein L25/general stress protein Ctc
[Thermoanaerobacter sp. X514]
gi|256750623|ref|ZP_05491509.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter ethanolicus CCSD1]
gi|300915060|ref|ZP_07132375.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter sp. X561]
gi|307724983|ref|YP_003904734.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5
[Thermoanaerobacter sp. X513]
gi|320115398|ref|YP_004185557.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5
[Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|226736371|sp|B0K775.1|RL25_THEP3 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226736372|sp|B0K664.1|RL25_THEPX RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166853931|gb|ABY92340.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter sp. X514]
gi|166855814|gb|ABY94222.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|256750463|gb|EEU63481.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter ethanolicus CCSD1]
gi|300888784|gb|EFK83931.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter sp. X561]
gi|307582044|gb|ADN55443.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter sp. X513]
gi|319928489|gb|ADV79174.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 201
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 31/193 (16%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+I+AI R+ TG + R ++QG IPA+++ + + + L+ E ++ +L
Sbjct: 5 SIEAIKRD-TGKNAARRLKNQGYIPAILYGKGMAESIP----------LAVEYNKLQRLL 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + I GS + ++ ++ D G+I+++ F E+
Sbjct: 54 QKHGRNVLLNV-----IVDGSTHNAVIK-------EIQEDTLKGKIIHVDFQRVSMYEEI 101
Query: 148 KVDVPVVFKG---VESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
+ VP+ F+G +ES +GG ++ L + I +I VD+SNL+IGD +F
Sbjct: 102 EATVPLKFEGTGLIES-----RGGIVQHQLWELTVESLPDKIPQEIVVDLSNLEIGDTLF 156
Query: 205 MSDIEVHPSWKLL 217
+ DI+V K++
Sbjct: 157 VKDIQVPEGVKVV 169
>gi|365173962|ref|ZP_09361502.1| ribosomal protein L25, Ctc-form [Synergistes sp. 3_1_syn1]
gi|363616483|gb|EHL67921.1| ribosomal protein L25, Ctc-form [Synergistes sp. 3_1_syn1]
Length = 220
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 91/200 (45%), Gaps = 23/200 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE TG+ V + RS+ IP V++ D K+ + + K I
Sbjct: 14 REVTGTGVCRKIRSKNLIPVVLYGPDY--KSGLAGTVAAKTIAPVANGGHRE-------- 63
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+T L I G+ +S L+ V R T +I ++ G ++KV++PV
Sbjct: 64 ---TTLIELTIDDGTTASALIRD-------VQRHPLTRQIRHIDLYQVLKGHKVKVEIPV 113
Query: 154 VFKGVESCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
E+ G+K+GG L + R L + P++ I +I VD +L++G VF+ D++V
Sbjct: 114 RVANAEASKGVKEGGLLTHAARLILVEVQPSD-IPEEIVVDAKDLEMGSEVFVKDLDVPE 172
Query: 213 SWKLLSKNEKMPLCKISATK 232
+L+ E + L ISA +
Sbjct: 173 GVTVLTDPEILVL-HISAIR 191
>gi|410479144|ref|YP_006766781.1| 50S ribosomal protein L25 [Leptospirillum ferriphilum ML-04]
gi|424867697|ref|ZP_18291477.1| Ribosomal protein L25 [Leptospirillum sp. Group II 'C75']
gi|124514473|gb|EAY55986.1| ribosomal protein L25 [Leptospirillum rubarum]
gi|387221751|gb|EIJ76264.1| Ribosomal protein L25 [Leptospirillum sp. Group II 'C75']
gi|406774396|gb|AFS53821.1| ribosomal protein L25 [Leptospirillum ferriphilum ML-04]
Length = 207
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 20/207 (9%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R G ++ R R G+IPAV++++ ++ S L+ +K HS S
Sbjct: 11 RSSNGKGIARRLRMAGQIPAVLYSRG--------KATSLSLNLAHVQKAFHSHAGS---- 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F L++ +G+S S L V RD TGRI++L F + ++ VPV
Sbjct: 59 ---HAIFRLKV---TGTSDGKGSVMALIRDVQRDPLTGRIMHLDFFELSEKDLVRNKVPV 112
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
G E+ G+K GG L+ + C + ++VD S+L + + + D+ P
Sbjct: 113 EIIG-ETPAGVKLGGVLEHHVREITVECLPAAMPDHLKVDASSLAMNESFHVRDLPAMPG 171
Query: 214 WKLLSKNEKMPLCKISATKLENPEPAV 240
++L + + L I + E P V
Sbjct: 172 LRVLDSPDTV-LVHILPPRTEAPAETV 197
>gi|395006685|ref|ZP_10390489.1| ribosomal protein L25, Ctc-form [Acidovorax sp. CF316]
gi|394315251|gb|EJE52062.1| ribosomal protein L25, Ctc-form [Acidovorax sp. CF316]
Length = 210
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 75/181 (41%), Gaps = 23/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R+ G+ P +V+ + Q++ + + LK
Sbjct: 5 AFERAKQGTGASRRLRNSGKTPGIVYG-----------GTAEPQLIEIDHNALWHALKK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F S+ +++ AGS S VLL + P K +L++ F D T+L +
Sbjct: 53 --EAFHSSVLDMEV-AGSTSKVLLRDVQYHPYK-------QLVLHIDFQRVDAKTKLHMK 102
Query: 151 VPVVFKGVESCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F G E P +K L + L C + I VD+S L G + + DI+
Sbjct: 103 VPLHFSGAEESPAVKVDHCLVNPVVNELDVSCMPSDLPEFIAVDLSKLQKGSSLHLKDIK 162
Query: 210 V 210
+
Sbjct: 163 L 163
>gi|99080057|ref|YP_612211.1| 50S ribosomal protein L25 [Ruegeria sp. TM1040]
gi|123379135|sp|Q1GK67.1|RL25_SILST RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|99036337|gb|ABF62949.1| LSU ribosomal protein L25P [Ruegeria sp. TM1040]
Length = 209
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG + R +P VVF D P QI + +LK ++
Sbjct: 13 RAGTGKGAARAARRANLVPGVVFGGD--------ADPLAIQI------PYNVLLKRLKAG 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ST F L++ D +V+ V RD + + +++ + +PV
Sbjct: 59 RFKSTLFNLKVEGH-------DDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKINLFIPV 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
F E C GLK+GG L +R ++ + A I K+ VD++ IGD + +SD+
Sbjct: 112 EFINEEECVGLKRGGVLTVVRAEVELVVTAGDIPEKLTVDLTGKAIGDVIHISDV 166
>gi|319795630|ref|YP_004157270.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5 [Variovorax
paradoxus EPS]
gi|315598093|gb|ADU39159.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Variovorax
paradoxus EPS]
Length = 223
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 90/211 (42%), Gaps = 24/211 (11%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI-HSILKS 89
A R G+ S R R G+ P +V+ + L + Q++ + + H++ K
Sbjct: 5 AFERAKQGTGASRRLRISGKTPGIVYGGEGL----------QPQLIEIDHNALWHALKKE 54
Query: 90 VELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKV 149
F S+ +++ G+ S VLL + P + + ++ F D T L +
Sbjct: 55 A----FHSSILEMEL-GGATSKVLLRDVQYHPFR-------QLVQHIDFQRVDAKTRLHM 102
Query: 150 DVPVVFKGVESCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VP+ FKG E +K L + T L+ C + IEVD+S L + ++DI
Sbjct: 103 KVPLHFKGEEESEAVKTAHNLVNHVITELEISCLPSDLPEFIEVDLSGLTKNATLHVNDI 162
Query: 209 EVHPSWKLLSKNEKMPLCKISATKLENPEPA 239
++ K +S ++ P+ + L EPA
Sbjct: 163 KLPKGVKYVSHGKQNPVIVSAVPPLVAEEPA 193
>gi|298530961|ref|ZP_07018362.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfonatronospira thiodismutans ASO3-1]
gi|298508984|gb|EFI32889.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Desulfonatronospira thiodismutans ASO3-1]
Length = 216
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
+++ F D E+ + VPV KG G + GG ++ R +L C +I ++ +D
Sbjct: 93 MHVDFYGVDLTKEVTIAVPVEVKGTPK--GAEDGGIMRIFRQTLDLTCLPANIPSQVTID 150
Query: 194 VSNLDIGDRVFMSDIEV 210
VS LDIGD +++ D+++
Sbjct: 151 VSKLDIGDNIYIEDLKM 167
>gi|296122874|ref|YP_003630652.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Planctomyces
limnophilus DSM 3776]
gi|296015214|gb|ADG68453.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Planctomyces
limnophilus DSM 3776]
Length = 216
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 9/139 (6%)
Query: 108 SGSSVL-LDSGKVLPIKVHRDEE----TGRILNLVFVWADDGTELKVDVPVVFKGVESCP 162
SG V+ LD VL + RD + T I ++ F+ D + VDV + KG + P
Sbjct: 56 SGHKVVDLDVEGVLEKAIIRDVQVDPFTRLIQHIDFMRVDPNERVTVDVAIELKG--TAP 113
Query: 163 GLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEK 222
G+ GG L+ S+K C A I I V VS+L +G + ++++E+ P + ++ E
Sbjct: 114 GILSGGMLEHQLHSIKVDCLAYQIPDSIVVKVSDLQLGGVIHVNELEIPPGVHVQTQGEL 173
Query: 223 M--PLCKISATKLENPEPA 239
+ + K+S +L+ P
Sbjct: 174 IVVHVVKVSTRELDLAAPG 192
>gi|158319104|ref|YP_001511611.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus
oremlandii OhILAs]
gi|158139303|gb|ABW17615.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Alkaliphilus
oremlandii OhILAs]
Length = 191
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 74/176 (42%), Gaps = 25/176 (14%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R+ G S R R +G +PAV++ ++ NT ++ R L ++ +
Sbjct: 10 RKNVGKNSSHRLREKGYVPAVIYGSNI---NTIPIELDHNEVQECIRNNNGGGLVTLNID 66
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
T F +I+ +D TG I++L F D ++ V VP+
Sbjct: 67 ENDYTVFIKEIQ--------------------KDPVTGNIIHLDFQQVDQNEKIHVLVPI 106
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
+ KG + + G L+ L+ C A +I +EVD+S+ GD + + D+E
Sbjct: 107 ILKGKSNIK--RSGSILQQQLRDLEVECSANNIPKALEVDISHFKPGDTLKVGDVE 160
>gi|259415376|ref|ZP_05739297.1| ribosomal protein L25, Ctc-form [Silicibacter sp. TrichCH4B]
gi|259348606|gb|EEW60368.1| ribosomal protein L25, Ctc-form [Silicibacter sp. TrichCH4B]
Length = 209
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG + R +P VVF D P QI + +LK ++
Sbjct: 13 RAGTGKGAARAARRAHMVPGVVFGGD--------ADPLAIQI------PYNVLLKRLKAG 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F ST F L++ D +V+ V RD + + +++ + +PV
Sbjct: 59 RFKSTLFNLKVEGH-------DDVRVICRDVQRDVVKDLPTHFDLMRLRRTSKINLFIPV 111
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
F E C GLK+GG L +R ++ + A I K+ VD++ IGD + +SD+ +
Sbjct: 112 EFINEEECVGLKRGGVLTVVRAEVELIVTAGDIPEKLTVDLTGKAIGDVIHISDVTLPEG 171
Query: 214 WK 215
K
Sbjct: 172 AK 173
>gi|146283515|ref|YP_001173668.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri A1501]
gi|166223708|sp|A4VPC5.1|RL25_PSEU5 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|145571720|gb|ABP80826.1| probable ribosomal protein L25 [Pseudomonas stutzeri A1501]
Length = 205
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 96/210 (45%), Gaps = 26/210 (12%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R+ +PAV++ + +P IL+ K +
Sbjct: 5 TLNAQVRSDLGKGASRRLRRNAALVPAVIYGGN--------NAPQSISILA---KDFAKL 53
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
L++ E F S L + G SVL+ + + P K G +L+ FV G +
Sbjct: 54 LEN-EASF--SHVLNLNVD-GQNESVLIKALQRHPAK-------GFVLHADFVRVVAGHK 102
Query: 147 LKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L VP+ F E+ G+KK GG + ++ C + + IEVD++N+++G + M
Sbjct: 103 LTATVPLHFINQETSVGVKKQGGEILHNLNEVEVSCMPQDLPEFIEVDMANVEVGQVLHM 162
Query: 206 SDIEVHPSWKL--LSKNEKMPLCKISATKL 233
+DI++ +L L+ +P+ + A ++
Sbjct: 163 TDIKLPKGVELVALAHGSDLPVANVHAPRV 192
>gi|197120548|ref|YP_002132499.1| 50S ribosomal protein L25/general stress protein Ctc
[Anaeromyxobacter sp. K]
gi|226736277|sp|B4ULC3.1|RL25_ANASK RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|196170397|gb|ACG71370.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Anaeromyxobacter sp. K]
Length = 240
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 80/183 (43%), Gaps = 24/183 (13%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ + A R G + R R QG IPAVV+ +R P+ + ++
Sbjct: 4 NVLSAQKRTEQGKGPARRLRQQGLIPAVVYG--------GKREPTHVALDPA------TL 49
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
LK++E P +T LQ+ G+ VL V P+ T ++L+ F+
Sbjct: 50 LKAIETPHKFNTLLELQVD-GASKHVLFKDYTVDPV-------TRKLLHADFLEVSLDQP 101
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++V+VPV G G+ +GG L + I +IEVDV+ L IG + +S
Sbjct: 102 VRVEVPVATVG--RAAGVAEGGILSVATHEVVVEALPNKIPVRIEVDVTELKIGRSLHVS 159
Query: 207 DIE 209
+++
Sbjct: 160 ELK 162
>gi|422665152|ref|ZP_16725024.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aptata str. DSM 50252]
gi|330975570|gb|EGH75636.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aptata str. DSM 50252]
Length = 204
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEQRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + P K G +++ FV G +
Sbjct: 51 AKLLENDAASSHIIELNV-GGKKQNVIIKALQRHPAK-------GHVMHADFVRVIAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VP+ F E P +KKGG + T L+ C + + IEVD+ L++GD V +S
Sbjct: 103 LTAIVPIHFLN-EEAP-VKKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLS 160
Query: 207 DIE 209
+++
Sbjct: 161 ELK 163
>gi|418719826|ref|ZP_13279025.1| ribosomal protein L25, Ctc-form [Leptospira borgpetersenii str. UI
09149]
gi|421093355|ref|ZP_15554079.1| ribosomal protein L25, Ctc-form [Leptospira borgpetersenii str.
200801926]
gi|410363338|gb|EKP14367.1| ribosomal protein L25, Ctc-form [Leptospira borgpetersenii str.
200801926]
gi|410743869|gb|EKQ92611.1| ribosomal protein L25, Ctc-form [Leptospira borgpetersenii str. UI
09149]
gi|456889571|gb|EMG00463.1| ribosomal protein L25, Ctc-form [Leptospira borgpetersenii str.
200701203]
Length = 212
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 83/194 (42%), Gaps = 24/194 (12%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S H I R TG + R RS G IP + + + + K++ +K +
Sbjct: 4 STIHKIAVKKRTETGKNENNRLRSSGMIPVNIIGAGVATSG----AVNEKEL----QKMV 55
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
HS ++ ST L + G G KV ++ R E RI ++ F
Sbjct: 56 HSGIRQ-------STLIELDVE-GQGQQ------KVFVKEIQRFPEIDRIRHVDFYKVVP 101
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G ++ + + GV G K GG + I ++ E + + +DV++LD+GD +
Sbjct: 102 GKKIVTKIGIETTGV--AKGSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSI 159
Query: 204 FMSDIEVHPSWKLL 217
+S ++V SW++L
Sbjct: 160 KISQLKVPASWEIL 173
>gi|285017303|ref|YP_003375014.1| 50S ribosomal protein L25 [Xanthomonas albilineans GPE PC73]
gi|283472521|emb|CBA15026.1| putative 50s ribosomal protein l25 [Xanthomonas albilineans GPE
PC73]
Length = 214
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 77/185 (41%), Gaps = 23/185 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I+ RE G S R R G IPA+V+ DL P Q+ E +
Sbjct: 5 HEIKVQRREVEGKGASRRLRRDGVIPAIVYGGDL--------KPVNIQLDHNE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ + +F S+ L + D KVL + R I+++ F +D
Sbjct: 51 WLASQNDWFYSSILSLSLNG--------DVQKVLLRDMQRHPYKQLIMHIDFQRVNDNEV 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L VP+ F + P K + + ++ +C + + +EVD+S L +GD + +
Sbjct: 103 LHASVPLHFLHEDVSPAGKSAEVVVTHELNEIQVVCLPKDLPEFVEVDLSTLSVGDVIHL 162
Query: 206 SDIEV 210
SD+++
Sbjct: 163 SDLKL 167
>gi|168830302|gb|ACA34399.1| RplY [uncultured bacterium pTW2]
Length = 226
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 30/205 (14%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I A R+ G S R R G++PA+V+ P Q L ER + S
Sbjct: 4 HKITATSRKDEGKGASRRLRHAGQVPAIVYG--------GHADPVSIQ-LEHERTWLVS- 53
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ +F ++ L+I G VLL + P K RI+++ F
Sbjct: 54 ----QSEWFYASILDLEID-GKSEKVLLRDMQRHPYK-------QRIMHMDFQRVSANEA 101
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
++V VP+ F V+ P K G + T ++ C + I++D+SNL GD + +
Sbjct: 102 IRVSVPLHFLNVDKSPAGKTAGVVVMHELTQIEVSCLPGDLPEFIDIDLSNLQAGDTMHL 161
Query: 206 SDIEVHPSWKLLSKNEKMPLCKISA 230
S ++ L K ++P ++ A
Sbjct: 162 SQVQ-------LPKGVEVPELRLGA 179
>gi|429750610|ref|ZP_19283628.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 332
str. F0381]
gi|429164306|gb|EKY06449.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 332
str. F0381]
Length = 199
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/205 (20%), Positives = 96/205 (46%), Gaps = 29/205 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+ RE G + R+ G++P V++ D + S SI
Sbjct: 5 TIKGSQRESVGKAATKALRNAGQVPCVLYGGDNVLH------------FSAPEMAFKSI- 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
V P + T +++ S +++L D + D + +IL++ F + E+
Sbjct: 52 --VYTPNVYTAT--IELGGKSYTAILQD--------IQFDPVSDKILHVDFYELNKNKEI 99
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
++VP+ +G + PG+ GG L+ + LK +++ + VD+S +++G++++++
Sbjct: 100 TIEVPIQIEG--TSPGVMAGGTLRIVNRKLKVKALPDNLPDFVSVDISGMEMGNKLYVTK 157
Query: 208 IEVHPSWKLLSKNEKMPLCKISATK 232
+ ++K++ + + +C+I ++
Sbjct: 158 LP-QENYKIMHPDNTV-VCQIRISR 180
>gi|319406826|emb|CBI80459.1| 50S ribosomal protein L25 [Bartonella sp. 1-1C]
Length = 208
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 34/190 (17%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T +A RE G S R G IPAV++ D++ P +S K I
Sbjct: 5 YTFRAEIRERVGKGSSRELRRNGLIPAVIYG--------DKQPPLA---ISVPYKDI--- 50
Query: 87 LKSVELPFFCSTTFPLQIRAG----SGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVW 140
F+ +I AG + +++ +D K VLP D +++ F+
Sbjct: 51 -------FY-------KIHAGGFRTTVATIEIDQQKIQVLPKDYQLDPVRDFPIHVDFLR 96
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
+ + V +PV F + PG+K+GG L +R ++ A I IE+D+S+ IG
Sbjct: 97 ISAKSIVHVHIPVHFLNEDIAPGIKRGGVLNIVRHEIECTALAHAIPEAIEIDLSSYSIG 156
Query: 201 DRVFMSDIEV 210
D + +S +++
Sbjct: 157 DSIHISAVQL 166
>gi|183219660|ref|YP_001837656.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
gi|189909797|ref|YP_001961352.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Ames)']
gi|167774473|gb|ABZ92774.1| 50S Ribosomal protein L25 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167778082|gb|ABZ96380.1| 50S ribosomal protein L25 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 211
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 82/192 (42%), Gaps = 29/192 (15%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+I+A PR TG + R R +G +PA + + S K+I ++
Sbjct: 5 SIKAQPRTSTGKGPARRMRVEGLVPANIIGS------------GEAKSASVVEKEIQKLI 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLD--SGKVLPIKVHRDEETGRILNLVFVWADDGT 145
S IR + + LD S KV ++ R TG+I ++ F G
Sbjct: 53 DS-------------GIRKATLIDLELDGKSEKVFVKEIQRFPHTGQIRHIDFYKVTPGK 99
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+++ V + GV G K GG + + +K E ++ I VDV+ LDIG + +
Sbjct: 100 KIQTTVAIKTTGV--AKGSKAGGQFEHLVHEIKVKSTPEDLTDVITVDVTGLDIGMMIKV 157
Query: 206 SDIEVHPSWKLL 217
S++ SW++L
Sbjct: 158 SELPHPQSWEIL 169
>gi|411119184|ref|ZP_11391564.1| LSU ribosomal protein L25P [Oscillatoriales cyanobacterium JSC-12]
gi|410711047|gb|EKQ68554.1| LSU ribosomal protein L25P [Oscillatoriales cyanobacterium JSC-12]
Length = 187
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 83/172 (48%), Gaps = 23/172 (13%)
Query: 38 GSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCS 97
GS+ +A RS G++PAV++ + D++ +++ L + I++ L V +P
Sbjct: 13 GSKPNALRRS-GKLPAVLYGHNG-DESLSLVLDAKEAELLLRKASINNSLIQVNIP---D 67
Query: 98 TTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKG 157
++ +GK L +V G ++ F L+VDVP+ F G
Sbjct: 68 KSW---------------NGKALLREVQTHPWRGTPYHISFFAVAAHGSLEVDVPLHFVG 112
Query: 158 VESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ G+K GG L +SL C AE I +IEVDVS+LD+G+ + +S +
Sbjct: 113 --TAKGIKVGGGSLDPSMSSLHVKCVAEKIPDQIEVDVSDLDVGESLQVSQL 162
>gi|153938247|ref|YP_001392394.1| 50S ribosomal protein L25 [Clostridium botulinum F str. Langeland]
gi|384463368|ref|YP_005675963.1| 50S ribosomal protein L25 [Clostridium botulinum F str. 230613]
gi|152934143|gb|ABS39641.1| 50S ribosomal protein L25 [Clostridium botulinum F str. Langeland]
gi|295320385|gb|ADG00763.1| 50S ribosomal protein L25 [Clostridium botulinum F str. 230613]
Length = 178
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 76/180 (42%), Gaps = 33/180 (18%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R C S RD G++P +V+ ++L + ++++++ V
Sbjct: 9 RNCKNSNKVRRD---GKVPGIVYGKNL-----------NNLMFEVGEIELNNMISQVGEH 54
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVD 150
+ G+ VL+ + P+K +H D E + + +
Sbjct: 55 GVTDINY-----EGTDYKVLIKEVQKDPVKKNVIHIDLEN---------VTNSSNLINAE 100
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+P++F G E +KKGG ++ + S+K CP E + I VD+S DIG +SD+E+
Sbjct: 101 IPILFSGDELI--MKKGGVVQKEKNSVKVRCPEEKLPNNIMVDLSQYDIGKTFRISDLEL 158
>gi|399888235|ref|ZP_10774112.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
arbusti SL206]
Length = 205
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
K L ++ +D +IL++ EL +VP+ F G + K GG ++ + ++
Sbjct: 70 KTLIKEIQKDSINHKILHIDLEELSGNGELVTEVPLTFNGEDDIR--KMGGIIQKSKDTI 127
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPE 237
K C A+++ I VD+S L+ GD + ++D+E ++ + + L SA+ + P+
Sbjct: 128 KVKCEADNLPKTINVDISTLNFGDSLRVADVEASSEISIVDDLKSIVLTITSASGGDIPD 187
>gi|359687309|ref|ZP_09257310.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418750389|ref|ZP_13306675.1| ribosomal protein L25, Ctc-form [Leptospira licerasiae str.
MMD4847]
gi|418756634|ref|ZP_13312822.1| ribosomal protein L25, Ctc-form [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384116305|gb|EIE02562.1| ribosomal protein L25, Ctc-form [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404272992|gb|EJZ40312.1| ribosomal protein L25, Ctc-form [Leptospira licerasiae str.
MMD4847]
Length = 206
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 86/191 (45%), Gaps = 24/191 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H + R TG V+ R R+ G++P + N S + K++ K +HS
Sbjct: 3 HKLAVKKRTETGKNVNNRLRADGQVPINIIGGG----NAASGSVNEKEL----EKLVHSG 54
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
++ ST L++ G G KV +V R E RI ++ F + G +
Sbjct: 55 IRQ-------STLIELEVE-GEGVQ------KVFVKEVQRFPEIDRIRHVDFYKVEPGKK 100
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ + + +G + G K GG + ++ E + + +DV++LD+GD + +S
Sbjct: 101 IVTKIGIRTEG--TAKGSKMGGQFDHLIHEIRVKTVPEDLVETLVLDVTDLDVGDFIKVS 158
Query: 207 DIEVHPSWKLL 217
+++V SW++L
Sbjct: 159 NLKVPASWEIL 169
>gi|380510761|ref|ZP_09854168.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
sacchari NCPPB 4393]
Length = 215
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 78/185 (42%), Gaps = 23/185 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I+ RE G S R R G IPA+V+ DL P Q+ E +
Sbjct: 5 HEIKVQRREVEGKGASRRLRRDGLIPAIVYGGDL--------KPVNIQLDHNE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ + +F S+ L + D KVL + R I+++ F +D
Sbjct: 51 WLASQNDWFYSSILSLSLNG--------DVQKVLLRDMQRHPFKQLIMHIDFQRVNDNEA 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L VP+ F + P K + + ++ +C + + +EVD+++L +GD + +
Sbjct: 103 LHASVPLHFINEDVSPAGKSAEVVVTHELNEIQVVCLPKDLPEFVEVDLASLSVGDVIHL 162
Query: 206 SDIEV 210
SD+++
Sbjct: 163 SDLKL 167
>gi|434400005|ref|YP_007134009.1| LSU ribosomal protein L25P [Stanieria cyanosphaera PCC 7437]
gi|428271102|gb|AFZ37043.1| LSU ribosomal protein L25P [Stanieria cyanosphaera PCC 7437]
Length = 198
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 51/95 (53%), Gaps = 6/95 (6%)
Query: 116 SGKVL--PIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSI 173
+GK L ++VH ++T L+ V A EL V + +V + G+K+GG L+ +
Sbjct: 71 NGKALIREVQVHPWKKTLHHLSFFSVAAHGTLELVVPIKIVGEAA----GIKQGGILEQM 126
Query: 174 RTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
T L C AE+I IE+++S +IG + + D+
Sbjct: 127 MTELNISCTAENIPESIEINISQFEIGSNLTVGDV 161
>gi|148358613|ref|YP_001249820.1| 50S ribosomal protein L25 [Legionella pneumophila str. Corby]
gi|296108297|ref|YP_003619998.1| 50S ribosomal protein L25 [Legionella pneumophila 2300/99 Alcoy]
gi|166223693|sp|A5IAS4.1|RL25_LEGPC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|148280386|gb|ABQ54474.1| 50S ribosomal protein L25, ribosomal 5S rRNA E- loop binding
protein [Legionella pneumophila str. Corby]
gi|295650199|gb|ADG26046.1| large subunit ribosomal protein L25 [Legionella pneumophila 2300/99
Alcoy]
Length = 219
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE- 209
VPV F E PG+K GG ++ T ++ C A+ + IEVD+S + + D V +SD++
Sbjct: 107 VPVHFINEEQSPGIKAGGIVQHTMTQVEIRCQAKDLPEFIEVDMSKVGMDDVVHLSDLKL 166
Query: 210 ---VHPSWKLLSKNEKMPLCKISATKLENPE 237
V + + + P+ I A K+ + E
Sbjct: 167 PKGVQLTVDVTDGSHDAPVVSIHAAKVSSTE 197
>gi|57168447|ref|ZP_00367581.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter
coli RM2228]
gi|305432866|ref|ZP_07402024.1| 50S ribosomal protein L25 [Campylobacter coli JV20]
gi|419542507|ref|ZP_14081630.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2548]
gi|419544810|ref|ZP_14083755.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2553]
gi|419550043|ref|ZP_14088563.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2688]
gi|419551912|ref|ZP_14090237.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2692]
gi|419553867|ref|ZP_14092020.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2698]
gi|419558653|ref|ZP_14096505.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 80352]
gi|419559961|ref|ZP_14097612.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 86119]
gi|419600652|ref|ZP_14135404.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 23344]
gi|419602255|ref|ZP_14136835.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 151-9]
gi|419610491|ref|ZP_14144553.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli H8]
gi|57020255|gb|EAL56929.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Campylobacter
coli RM2228]
gi|304444020|gb|EFM36675.1| 50S ribosomal protein L25 [Campylobacter coli JV20]
gi|380522954|gb|EIA48616.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2548]
gi|380524774|gb|EIA50360.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2553]
gi|380531593|gb|EIA56611.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2688]
gi|380532963|gb|EIA57925.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2692]
gi|380533509|gb|EIA58431.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2698]
gi|380537642|gb|EIA62184.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 86119]
gi|380538933|gb|EIA63354.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 80352]
gi|380581497|gb|EIB03220.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 151-9]
gi|380582789|gb|EIB04400.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 23344]
gi|380589937|gb|EIB10973.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli H8]
Length = 178
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE G + + + G + A ++ + L + N + ++ +K
Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFK--------------VNDFIK 47
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
V TT ++ GS + V+ + +D T + ++ A G K
Sbjct: 48 EVR----KKTTLAFDVKVGSQTL------NVVVVDYQKDPVTAELKHVDLKVAQKGVISK 97
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV G + GLK G L + LK C AE++ E+DVS LD+GD + + DI
Sbjct: 98 YMVPVKITG--TAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDI 155
Query: 209 EV 210
V
Sbjct: 156 VV 157
>gi|167629342|ref|YP_001679841.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5
[Heliobacterium modesticaldum Ice1]
gi|226736327|sp|B0TBA3.1|RL25_HELMI RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|167592082|gb|ABZ83830.1| ribosomal 5S rRNA e-loop binding protein ctc/l25/tl5
[Heliobacterium modesticaldum Ice1]
Length = 231
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 100/203 (49%), Gaps = 28/203 (13%)
Query: 29 IQAIPRECTGSRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
++AI RE GSR ++ R +G +PAVV+ +D D ++S K++ +L
Sbjct: 6 LRAIRRE-KGSRGYIKELRKRGLLPAVVYGKDKPD-----------MLISVNAKELSGLL 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLV-FVWADDGTE 146
K++ S LQ+ D KV+ ++ RD GR+ N V F D
Sbjct: 54 KAM---GSASAILDLQVEGSD------DRHKVMLKEMQRDP-VGRMPNHVDFQLVDWNKP 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLK-SIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ ++P+ G + G+K GG ++ +RT P + + P+ ++D+S+L++ D++ +
Sbjct: 104 VHAEIPIHLVGTPA--GVKAGGIIQHGLRTVEVEGLPGK-LPPRFDIDISHLELHDKMTV 160
Query: 206 SDIEVHPSWKLLSKNEKMPLCKI 228
+DI ++S+ +++ L I
Sbjct: 161 ADITSPAGIAIISEPDQVILSII 183
>gi|52842858|ref|YP_096657.1| 50S ribosomal protein L25 [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54295490|ref|YP_127905.1| 50S ribosomal protein L25 [Legionella pneumophila str. Lens]
gi|54298641|ref|YP_125010.1| 50S ribosomal protein L25/general stress protein Ctc [Legionella
pneumophila str. Paris]
gi|378778547|ref|YP_005186986.1| 50S ribosomal protein L25, ribosomal 5S rRNA E-loop binding protein
[Legionella pneumophila subsp. pneumophila ATCC 43290]
gi|397665242|ref|YP_006506780.1| 50S ribosomal protein L25 (General stress protein CTC) [Legionella
pneumophila subsp. pneumophila]
gi|397668326|ref|YP_006509863.1| 50S ribosomal protein L25 (General stress protein CTC) [Legionella
pneumophila subsp. pneumophila]
gi|68053068|sp|Q5WTE8.1|RL25_LEGPL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|68053069|sp|Q5X1N8.1|RL25_LEGPA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|68053082|sp|Q5ZS67.1|RL25_LEGPH RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|52629969|gb|AAU28710.1| 50S ribosomal protein L25, ribosomal 5S rRNA E-loop binding protein
[Legionella pneumophila subsp. pneumophila str.
Philadelphia 1]
gi|53752426|emb|CAH13858.1| hypothetical protein lpp2705 [Legionella pneumophila str. Paris]
gi|53755322|emb|CAH16818.1| hypothetical protein lpl2577 [Legionella pneumophila str. Lens]
gi|307611527|emb|CBX01204.1| hypothetical protein LPW_29031 [Legionella pneumophila 130b]
gi|364509363|gb|AEW52887.1| 50S ribosomal protein L25, ribosomal 5S rRNA E-loop binding protein
[Legionella pneumophila subsp. pneumophila ATCC 43290]
gi|395128653|emb|CCD06871.1| 50S ribosomal protein L25 (General stress protein CTC) [Legionella
pneumophila subsp. pneumophila]
gi|395131737|emb|CCD10030.1| 50S ribosomal protein L25 (General stress protein CTC) [Legionella
pneumophila subsp. pneumophila]
Length = 219
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 4/91 (4%)
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE- 209
VPV F E PG+K GG ++ T ++ C A+ + IEVD+S + + D V +SD++
Sbjct: 107 VPVHFINEEQSPGIKAGGIVQHTMTQVEIRCQAKDLPEFIEVDMSKVGMDDVVHLSDLKL 166
Query: 210 ---VHPSWKLLSKNEKMPLCKISATKLENPE 237
V + + + P+ I A K+ + E
Sbjct: 167 PKGVQLTVDVADGSHDAPVVSIHAAKVSSTE 197
>gi|390943535|ref|YP_006407296.1| 50S ribosomal protein L25 [Belliella baltica DSM 15883]
gi|390416963|gb|AFL84541.1| LSU ribosomal protein L25P [Belliella baltica DSM 15883]
Length = 190
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 133 ILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEV 192
+L+ F+ + E+K+D+PV G + PG+ KGG L+ +LK A ++ +I V
Sbjct: 87 LLHADFLAYTENKEIKMDIPVEIMG--TSPGIIKGGKLEMKARTLKVKGLASNLPDRIPV 144
Query: 193 DVSNLDIGDRVFMSDIEVHPSWKLLSKN 220
D+S+LD+G V +S++ V L S N
Sbjct: 145 DISHLDLGKSVKVSELSVEGFEILTSPN 172
>gi|407363828|ref|ZP_11110360.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
mandelii JR-1]
Length = 200
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 83/182 (45%), Gaps = 25/182 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ + ++P +L+ E +
Sbjct: 5 TLNAEVRSDLGKGASRRLRRLASLVPAVVYGGE--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G+ +V++ + + P K G +L+ FV G +
Sbjct: 51 AKLLENEAAYSHIIELNV-GGTKQNVIIKALQRHPAK-------GHVLHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E P +KKGG + + + ++ C + + IEVD++N +IG + +S
Sbjct: 103 LTAIVPVHFVG-EEAP-IKKGGEVSHVVSEIEVTCLPKDLPEFIEVDLANAEIGSIIHLS 160
Query: 207 DI 208
D+
Sbjct: 161 DL 162
>gi|385800630|ref|YP_005837034.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium
praevalens DSM 2228]
gi|309389994|gb|ADO77874.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Halanaerobium
praevalens DSM 2228]
Length = 222
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 93/206 (45%), Gaps = 25/206 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H+I+A R TG + R G IP VV+ + D RS + + I +
Sbjct: 4 HSIEAELRTETGKGAARTIRRDGLIPGVVYG-----RGNDPRS------IKVDPLDIEKL 52
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
L S + F L G D V+ +D +L++ F + +
Sbjct: 53 LHS-------NAIFDLTFVGEDGGE---DEATVIIKDYQKDVIKQNLLHVDFQFISMDEK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKY-LCPAEHISPKIEVDVSNLDIGDRVFM 205
+ V VP+ +G G++ GG L+ + ++ PAE I +I +D+S L++G+ + +
Sbjct: 103 ITVSVPMRLEG--DALGVRNGGVLQHLLREIEIDALPAE-IPEEITIDISELEVGESLAV 159
Query: 206 SDIEVHPSWKLLSKNEKMPLCKISAT 231
+D+E+ L+++++++ + ++ T
Sbjct: 160 ADLELSEGLDLVTESDEVIVTVVTPT 185
>gi|397690860|ref|YP_006528114.1| 50S ribosomal protein L25P [Melioribacter roseus P3M]
gi|395812352|gb|AFN75101.1| Ribosomal protein L25P [Melioribacter roseus P3M]
Length = 211
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
E++V+VPVV +G + G+K+GG L+ + L C +I I VD++NL IG+ V +
Sbjct: 100 EIQVEVPVVLEG--ASIGVKEGGILQQLLHKLTIKCLPGNIPEHISVDITNLKIGESVHV 157
Query: 206 SDI 208
DI
Sbjct: 158 KDI 160
>gi|71734821|ref|YP_273262.1| 50S ribosomal protein L25 [Pseudomonas syringae pv. phaseolicola
1448A]
gi|257482001|ref|ZP_05636042.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|289627924|ref|ZP_06460878.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aesculi str. NCPPB 3681]
gi|289647281|ref|ZP_06478624.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aesculi str. 2250]
gi|416029130|ref|ZP_11572019.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422406652|ref|ZP_16483676.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. glycinea str. race 4]
gi|422584070|ref|ZP_16659185.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|422598331|ref|ZP_16672594.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|422679514|ref|ZP_16737787.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
gi|109893378|sp|Q48MW0.1|RL25_PSE14 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71555374|gb|AAZ34585.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. phaseolicola 1448A]
gi|298159701|gb|EFI00743.1| LSU ribosomal protein L25p [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|320327397|gb|EFW83411.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330868892|gb|EGH03601.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aesculi str. 0893_23]
gi|330881888|gb|EGH16037.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. glycinea str. race 4]
gi|330988611|gb|EGH86714.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. lachrymans str. M301315]
gi|331008861|gb|EGH88917.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. tabaci str. ATCC 11528]
Length = 203
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEQRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + P K G +++ FV G +
Sbjct: 51 AKLLENDAAYSHIIELNV-GGQKQNVIIKALQRHPAK-------GHVMHADFVRVIAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VP+ F E P +KKGG + T L+ C + + IEVD+ L++GD V +S
Sbjct: 103 LTAIVPIHFLN-EEAP-VKKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLS 160
Query: 207 DIE 209
+++
Sbjct: 161 ELK 163
>gi|340622282|ref|YP_004740734.1| General stress protein CTC [Capnocytophaga canimorsus Cc5]
gi|339902548|gb|AEK23627.1| General stress protein CTC [Capnocytophaga canimorsus Cc5]
Length = 200
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/181 (20%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+ RE G S R+ G++P V++ D S E I+
Sbjct: 5 TIKGSQRESVGKAASKALRNAGKVPCVLYGGD------------SAVHFSAEEMAFKGIV 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + T +++ G + +L + D + +IL++ F D E+
Sbjct: 53 YTPNV-----YTAAIELDNGQKYNAILQD-------IQFDPVSDKILHIDFYQLHDDKEV 100
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
++VP+ G + PG+ GG L+ + LK ++ + VD+S +++G++++++
Sbjct: 101 TIEVPIKVTG--TSPGVMAGGVLRIVNRKLKVKALPNNLPDFVTVDISGMEMGNKLYITK 158
Query: 208 I 208
+
Sbjct: 159 L 159
>gi|222824358|ref|YP_002575932.1| 50S ribosomal protein L25 [Campylobacter lari RM2100]
gi|254801040|sp|B9KDP2.1|RL25_CAMLR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|222539579|gb|ACM64680.1| 50S ribosomal protein L25 [Campylobacter lari RM2100]
Length = 178
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 32/185 (17%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE G + + + G + A ++ + L + N + I+ +K
Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFK--------------INEFIK 47
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKV---HRDEETGRILNLVFVWADDGT 145
V TT ++ G GKVL + V +D T + ++ A G
Sbjct: 48 EVR----KKTTLAFDVKVG---------GKVLNVVVVDYQKDPVTAELKHVDLKVAQKGV 94
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
K VPV K V + GLK G L + LK C AE++ E+DV+ LD+GD + +
Sbjct: 95 ISKYMVPV--KIVGTAMGLKNKGVLIQSKRRLKVKCAAENLPNYFELDVTKLDVGDALLV 152
Query: 206 SDIEV 210
D+ V
Sbjct: 153 RDVVV 157
>gi|257870925|ref|ZP_05650578.1| ribosomal protein L25 [Enterococcus gallinarum EG2]
gi|357051339|ref|ZP_09112533.1| 50S ribosomal protein L25 [Enterococcus saccharolyticus 30_1]
gi|257805089|gb|EEV33911.1| ribosomal protein L25 [Enterococcus gallinarum EG2]
gi|355380161|gb|EHG27306.1| 50S ribosomal protein L25 [Enterococcus saccharolyticus 30_1]
Length = 204
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Query: 138 FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
F+ D E +V+ + G G+K GG L S+ + + +IEVDV+ L
Sbjct: 91 FISVDMNEETEVEAELTLVG--DAAGVKAGGVLTQNLYSVVVSATPDKLPERIEVDVTGL 148
Query: 198 DIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKL-------ENPEPAVM 241
+IGD + + D+E + + ++++ E+ + A +L E EPAV+
Sbjct: 149 EIGDALTVGDLEKNDDYTIVTEAEEQIVAVAEAQELSEDDENGEAAEPAVI 199
>gi|422648183|ref|ZP_16711307.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. maculicola str. ES4326]
gi|330961721|gb|EGH61981.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. maculicola str. ES4326]
Length = 203
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEQRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + P K G +++ FV G +
Sbjct: 51 AKLLENDAAYSHIIELNV-GGQKQNVIIKALQRHPAK-------GHVMHADFVRVIAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VP+ F E P +KKGG + T L+ C + + IEVD+ L++GD V +S
Sbjct: 103 LTAIVPIHFVN-EEAP-VKKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLS 160
Query: 207 DIE 209
+++
Sbjct: 161 ELK 163
>gi|121612154|ref|YP_001000021.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 81-176]
gi|148927012|ref|ZP_01810688.1| ctc protein like protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|167004979|ref|ZP_02270737.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 81-176]
gi|419617492|ref|ZP_14151066.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 129-258]
gi|166223673|sp|A1VY30.1|RL25_CAMJJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|87250228|gb|EAQ73186.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 81-176]
gi|145844420|gb|EDK21529.1| ctc protein like protein [Campylobacter jejuni subsp. jejuni
CG8486]
gi|380597187|gb|EIB17849.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 129-258]
Length = 178
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE G + + + G + A ++ + L + N + ++ +K
Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFK--------------VNEFIK 47
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
V TT ++ GS + V+ + +D T + ++ A G K
Sbjct: 48 EVR----KKTTLIFDVKVGSQTL------SVVVVDYQKDSVTAELKHVDLKVAQKGVISK 97
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV G + GLK G L + LK C AE++ E+DVS LD+GD + + DI
Sbjct: 98 YMVPVKITG--TAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDI 155
Query: 209 EV 210
V
Sbjct: 156 VV 157
>gi|297621050|ref|YP_003709187.1| 50S ribosomal protein L25 [Waddlia chondrophila WSU 86-1044]
gi|297376351|gb|ADI38181.1| 50S ribosomal protein L25 [Waddlia chondrophila WSU 86-1044]
gi|337292273|emb|CCB90310.1| 50S ribosomal protein L25 [Waddlia chondrophila 2032/99]
Length = 186
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 19/177 (10%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R+ G+IPAV++ + + ++ + ++L++V+ +T L
Sbjct: 20 RNLGKIPAVLYVR-----------GKDSEAIAVDAADFETVLRTVKKGRLSTTKLALVDG 68
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
G +VL V I+ H T +L+L F D ++KV VP+ G C G+K
Sbjct: 69 TGKERNVL-----VKDIQYH--VTTYNVLHLDFEELLDNVKIKVKVPIECVGEVDCVGIK 121
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWK-LLSKNE 221
GG L+ + L+ C + + ++DV L + + +SD+E+ + + L+ NE
Sbjct: 122 LGGVLRRVIRYLRVHCLPKDLPEFFKMDVKTLGLKESRKLSDLEIPETVRPLMDLNE 178
>gi|289678416|ref|ZP_06499306.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. syringae FF5]
gi|302186450|ref|ZP_07263123.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. syringae 642]
gi|422619391|ref|ZP_16688081.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. japonica str. M301072]
gi|422631828|ref|ZP_16697008.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. pisi str. 1704B]
gi|422675086|ref|ZP_16734434.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aceris str. M302273]
gi|424066156|ref|ZP_17803628.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|424070802|ref|ZP_17808234.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|440720014|ref|ZP_20900435.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae BRIP34876]
gi|440726139|ref|ZP_20906396.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae BRIP34881]
gi|330899761|gb|EGH31180.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. japonica str. M301072]
gi|330941708|gb|EGH44465.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. pisi str. 1704B]
gi|330972808|gb|EGH72874.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. aceris str. M302273]
gi|407999885|gb|EKG40255.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. avellanae str. ISPaVe037]
gi|408002588|gb|EKG42831.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Pseudomonas
syringae pv. avellanae str. ISPaVe013]
gi|440366736|gb|ELQ03813.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae BRIP34876]
gi|440367286|gb|ELQ04352.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae BRIP34881]
Length = 204
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEQRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + P K G +++ FV G +
Sbjct: 51 AKLLENDAAYSHIIELNV-GGKKQNVIIKALQRHPAK-------GHVMHADFVRVIAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VP+ F E P +KKGG + T L+ C + + IEVD+ L++GD V +S
Sbjct: 103 LTAIVPIHFLN-EEAP-VKKGGEISHTTTELEVTCLPKDLPEFIEVDLGALEVGDNVHLS 160
Query: 207 DIE 209
+++
Sbjct: 161 ELK 163
>gi|186681114|ref|YP_001864310.1| 50S ribosomal protein L25/general stress protein Ctc [Nostoc
punctiforme PCC 73102]
gi|226736342|sp|B2J8B8.1|RL25_NOSP7 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|186463566|gb|ACC79367.1| transcriptional regulator, Fis family [Nostoc punctiforme PCC
73102]
Length = 199
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 81/173 (46%), Gaps = 25/173 (14%)
Query: 38 GSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCS 97
GS+ A RS G IPA ++ K T+ S L+ E K + +LK V + +
Sbjct: 13 GSKPRALRRS-GLIPANLYGH----KGTESIS------LTIEAKTVERLLKRVSV---NN 58
Query: 98 TTFPLQIR-AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFK 156
T L I A LL ++ P K G +L F + V+V + F
Sbjct: 59 TLIELNIADAPWRGKALLRELQIHPAK-------GTPYHLSFFAVAGHGDTTVEVRLRFV 111
Query: 157 GVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
G + G+K+ GG L ++ T L+ C E+I IE+DV+NL IGD + +SDI
Sbjct: 112 G--TAVGVKQEGGVLDTVITELQVSCAPENIPDVIEIDVTNLQIGDSLSISDI 162
>gi|390444015|ref|ZP_10231799.1| 50S ribosomal protein L25/general stress protein Ctc [Nitritalea
halalkaliphila LW7]
gi|389665454|gb|EIM76921.1| 50S ribosomal protein L25/general stress protein Ctc [Nitritalea
halalkaliphila LW7]
Length = 191
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 133 ILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEV 192
+L+ F+ + +K+D+PV G S PG++KGG L+ +LK A ++ KI V
Sbjct: 87 LLHADFLAFSEDRPVKMDIPVNIVG--SSPGIQKGGKLEIKARTLKVKGLASNLPDKINV 144
Query: 193 DVSNLDIGDRVFMSDIEVHPSWKLLSKN 220
D+S+LD+G V +S++ V L S N
Sbjct: 145 DISHLDLGKSVKVSELSVEGFEILTSPN 172
>gi|359149693|ref|ZP_09182662.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces
sp. S4]
Length = 196
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 77/182 (42%), Gaps = 29/182 (15%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A R G + R R + ++PAVV+ P+ H +L
Sbjct: 6 ISAETRSEFGKGAARRIRRESKVPAVVYGHG--------AEPA------------HVVLP 45
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
EL T+ L G S L V+P V RD G ++++ + G +++
Sbjct: 46 GHELMMALKTSNVLISLDLDGKSEL-----VIPKAVQRDALKGHLVHIDLLTVKRGEKVQ 100
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V+VPVV +G + PG L+ + ++L A +I + V V+ LD GD V DI
Sbjct: 101 VEVPVVAEG-DLAPG---ANLLEHVLSALPVEAEATNIPESLTVSVAGLDAGDSVLAKDI 156
Query: 209 EV 210
++
Sbjct: 157 KL 158
>gi|372487715|ref|YP_005027280.1| 50S ribosomal protein L25 [Dechlorosoma suillum PS]
gi|359354268|gb|AEV25439.1| ribosomal protein L25, Ctc-form [Dechlorosoma suillum PS]
Length = 200
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 23/194 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R G+ S R R G++P +V+ +P +S E ++I ++
Sbjct: 10 RNDQGTGASRRLRRAGKVPGIVYG--------GTAAP-----ISIEVDH-NAIYLALRKE 55
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
F S+ L I G SVLL + P K +L++ F D +L VP+
Sbjct: 56 AFHSSLINLNID-GKKESVLLRDYQAHPYK-------AIVLHVDFQRVDPNQKLHTKVPL 107
Query: 154 VFKGVESCPGLKKGGYLKS-IRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
F + PG+K GG + S + ++ C A + IEVD+ +L G + ++D+++
Sbjct: 108 HFVNADIAPGVKLGGGIVSHVLNEVEVTCLAADLPEFIEVDLKDLAAGHSIHIADVKLPK 167
Query: 213 SWKLLSKNEKMPLC 226
L+ + P+
Sbjct: 168 GVALVQHGQDNPVV 181
>gi|345865808|ref|ZP_08817977.1| 50S ribosomal protein L25 [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345123074|gb|EGW52985.1| 50S ribosomal protein L25 [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 162
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 45/78 (57%)
Query: 133 ILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEV 192
I+++ F G ++++ VP+ F E+ PG K GG + + ++ C + + IEV
Sbjct: 48 IMHIDFQRISAGEKIRMQVPLHFTNQETAPGTKAGGQASHMLSDVEITCLPKDLPEFIEV 107
Query: 193 DVSNLDIGDRVFMSDIEV 210
D+ +++GD + +S++++
Sbjct: 108 DMGEMNVGDAIHLSELKL 125
>gi|312797356|ref|YP_004030278.1| 50S ribosomal protein L25 [Burkholderia rhizoxinica HKI 454]
gi|312169131|emb|CBW76134.1| LSU ribosomal protein L25P [Burkholderia rhizoxinica HKI 454]
Length = 205
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/204 (21%), Positives = 88/204 (43%), Gaps = 23/204 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ P +V+ + + +++ + ++ L
Sbjct: 3 VVAFERSQQGTGASRRLRNAGKTPGIVYG-----------AGTEPKLIELDHNALYHALN 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ L+I AG+ VLL + P + +L++ F D T++
Sbjct: 52 K---EAFHSSILDLEI-AGATEQVLLRDVQYHPFRR-------LVLHVDFQRVDAKTKIT 100
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ + E P +K GG + + ++ C ++ IEVD++N ++ + D
Sbjct: 101 VKVPLHYMNQEGSPAVKLGGGVITHVLNEIEVSCLPGNLPEFIEVDLANFELNQSLHAKD 160
Query: 208 IEVHPSWKLLSKNEKMPLCKISAT 231
+++ +L E+ +SAT
Sbjct: 161 VKLPAGVELTPHVEQENPVIVSAT 184
>gi|15839232|ref|NP_299920.1| 50S ribosomal protein L25 [Xylella fastidiosa 9a5c]
gi|71153678|sp|Q9PA77.1|RL25_XYLFA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|9107874|gb|AAF85440.1|AE004071_8 50S ribosomal protein L25 [Xylella fastidiosa 9a5c]
Length = 208
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I+A R+ G S R R G IPA+++ + + P Q L+ E+ I
Sbjct: 4 HQIKAQRRKDEGKGASRRLRHAGMIPAIIYGGE--------QRPVSIQ-LNHEQ-----I 49
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ + +F S+ L + G G VLL + P + ++++ F +
Sbjct: 50 WLAQQNEWFYSSILDLNVDGGGGEKVLLRDLQRHPYR-------QLVMHVDFQRVSSDAK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYL-CPAEHISPKIEVDVSNLDIGDRVFM 205
L V VP+ F + P K G + + + ++ C + + IEVD+S L +G + +
Sbjct: 103 LSVAVPLHFINQATSPAGKASGVVITHELNEVHVSCLPKDLPEFIEVDLSTLSVGHVIHL 162
Query: 206 SDIEVHPSWKL---LSKNEKMPLCKISATKLENPEPA 239
SDI +L L K M + +E+ PA
Sbjct: 163 SDITFPIGVELSTRLDKEHDMAVVIAKHVVIEDDTPA 199
>gi|347547683|ref|YP_004854011.1| putative general stress protein [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346980754|emb|CBW84661.1| Putative general stress protein [Listeria ivanovii subsp. ivanovii
PAM 55]
Length = 207
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 33/178 (18%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQ-IHSI 86
T++ RE T + RS+G++P +++ S +S + + I ++
Sbjct: 4 TLEVQKRETTQHSEVTKLRSEGKVPGIIYGYK-----------SENVPVSVDSLELIKAV 52
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADD 143
+ F T G +VLL +V P+K VH D + D
Sbjct: 53 RDNGRNAVFAVTV------DGKKLNVLLHEYQVDPLKDTLVHVD----------LLAVDM 96
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
E++ DV VV G PG+K GG L+ I +K E + IE+D+S+L+IGD
Sbjct: 97 NEEVETDVRVVLVG--DAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGD 152
>gi|431792963|ref|YP_007219868.1| 50S ribosomal protein L25 [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430783189|gb|AGA68472.1| LSU ribosomal protein L25P [Desulfitobacterium dichloroeliminans
LMG P-21439]
Length = 193
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 123 KVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCP 182
++ RD +++++ + +K+ VP+ F+G E +K L+ + ++ P
Sbjct: 73 EIQRDLTLNKLIHISMQVVREDQIVKMKVPLTFEGTEKLN--EKRLILQPYFSEIELTGP 130
Query: 183 AEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENP 236
+ I I VDV+N+ +G+++ ++D+ V PS ++L +EK+ + I+A+++ P
Sbjct: 131 SMDIPEHILVDVANISLGEKITVADLTVKPSVEILDDSEKI-IAAITASRVNLP 183
>gi|85859731|ref|YP_461933.1| 50S ribosomal protein L25 [Syntrophus aciditrophicus SB]
gi|109893400|sp|Q2LUK6.1|RL25_SYNAS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|85722822|gb|ABC77765.1| LSU ribosomal protein L25P [Syntrophus aciditrophicus SB]
Length = 200
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 79/187 (42%), Gaps = 21/187 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R+ +G + R R +G IPAV++ TD S LS + + LK
Sbjct: 6 LKANVRKESGKEQARRMRREGLIPAVLYG-----PGTDPVS------LSVNASDLKTALK 54
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
E R +S L+ ++ P+ T + F E
Sbjct: 55 GAEENVLIKLIIDDSGRLMEKNS-LIRELQIEPL-------TNNFFHADFYALRMDQEST 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
DVP+ F+G G++KGG L+ ++ +K C + I VD+S LD+GD V + D+
Sbjct: 107 FDVPIHFEG--QPVGIEKGGELQYLKREIKVSCLPSELPDCITVDISRLDVGDAVLIGDL 164
Query: 209 EVHPSWK 215
+ S +
Sbjct: 165 SLSESIR 171
>gi|213962523|ref|ZP_03390785.1| ribosomal protein L25, Ctc-form [Capnocytophaga sputigena Capno]
gi|429751530|ref|ZP_19284443.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|213954849|gb|EEB66169.1| ribosomal protein L25, Ctc-form [Capnocytophaga sputigena Capno]
gi|429180475|gb|EKY21695.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 199
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/205 (18%), Positives = 95/205 (46%), Gaps = 29/205 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+ RE G S R+ G++P V++ D + S +I+
Sbjct: 5 TIKGSQRESVGKAASKALRNAGQVPCVLYGGDNVLH------------FSAPELAFKNIV 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + T +++ + ++L D + D T +I+++ F + E+
Sbjct: 53 YTPNV-----YTAAIELNGKTYDAILQD--------IQFDPVTDKIIHIDFYQLNKNKEI 99
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
++VP+ +G + PG+ GG L+ + LK +++ + V++S L++G++++++
Sbjct: 100 TIEVPIQIEG--TSPGIMAGGTLRIVNRKLKVKALPDNLPDFVPVNISGLEMGNKLYVTK 157
Query: 208 IEVHPSWKLLSKNEKMPLCKISATK 232
+ ++K++ + + +C+I ++
Sbjct: 158 L-AQENYKIMHPDNTV-VCQIRVSR 180
>gi|157363317|ref|YP_001470084.1| 50S ribosomal protein L25/general stress protein Ctc [Thermotoga
lettingae TMO]
gi|157313921|gb|ABV33020.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermotoga
lettingae TMO]
Length = 216
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 87/191 (45%), Gaps = 25/191 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A+ R G R + R++G IPAVV+ + T+ S ++ + ++ +L
Sbjct: 3 LKAMLRNERGKRSVRKMRAKGLIPAVVYGPE-----TEPLS------INLNKSEVEKLLA 51
Query: 89 SVELPFFCSTTFP--LQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
S P L+I+ S + +V KV D+ T I+++ F G
Sbjct: 52 K------ASEALPVGLEIKYDDRS----EEMEVFIKKVQVDKVTDEIVHIDFYKPAKGHT 101
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+K++VP+ G G++KGG L+ + L + IE+DV++L++G V +
Sbjct: 102 MKINVPIRVFG--KAIGVEKGGILEIVHNELPVETLPSALIDHIEIDVTHLELGQSVHVK 159
Query: 207 DIEVHPSWKLL 217
D+ + K L
Sbjct: 160 DLRLPSGMKAL 170
>gi|77460975|ref|YP_350482.1| 50S ribosomal protein L25 [Pseudomonas fluorescens Pf0-1]
gi|109893381|sp|Q3K6W3.1|RL25_PSEPF RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|77384978|gb|ABA76491.1| 50S ribosomal protein L25 [Pseudomonas fluorescens Pf0-1]
Length = 200
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAELRSDLGKGASRRLRRLAALVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G+ +V++ + + P K G +++ FV G +
Sbjct: 51 AKLLENEAAYSHVIELNV-GGTKQNVIIKALQRHPAK-------GHVMHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F E+ P +KKGG + + ++ C + + IEVD++N +IG V +S
Sbjct: 103 LTAIVPVHFIN-EAAP-VKKGGEISHVVAEIEVSCLPKDLPEFIEVDLANAEIGTIVHLS 160
Query: 207 DIE 209
DI+
Sbjct: 161 DIK 163
>gi|418737543|ref|ZP_13293940.1| ribosomal protein L25, Ctc-form [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|410746737|gb|EKQ99643.1| ribosomal protein L25, Ctc-form [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
Length = 212
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 81/194 (41%), Gaps = 24/194 (12%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S H I R TG + R RS G IP + + + + K++ +K +
Sbjct: 4 STIHKIAVKKRTETGKNENNRLRSSGMIPVNIIGAGVATSG----AVNEKEL----QKMV 55
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
HS ST L + G G KV ++ R E RI ++ F
Sbjct: 56 HS-------GIHQSTLIELDVE-GQGQQ------KVFVKEIQRFPEIDRIRHVDFYKVVP 101
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G ++ + + GV G K GG + I ++ E + + +DV++LD+GD +
Sbjct: 102 GKKIVTKIGIETTGV--AKGSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSI 159
Query: 204 FMSDIEVHPSWKLL 217
+S ++V SW++L
Sbjct: 160 KISQLKVPASWEIL 173
>gi|424693518|ref|ZP_18129948.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV37]
gi|402373952|gb|EJV07999.1| ribosomal protein L25, Ctc-form [Enterococcus faecalis ERV37]
Length = 202
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 39/192 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILST----ERKQIHSILKSVELPFFCSTTFP 101
R +G++PA+V+ QI ST E K + IL+ +T
Sbjct: 22 RHEGKVPAIVYGY---------------QIESTPIYFEEKDLSKILRE----HGANTVIK 62
Query: 102 LQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD--DGTELKVDVPVVFKGVE 159
+ + G + L+ K D TG++L++ F+ + + TE++ +V ++ +
Sbjct: 63 MTVD-GKNINTLMS-------KAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--- 111
Query: 160 SCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
+K GG L +++ T L P + + IEVD++NL+IGD + ++D+ H +++L+
Sbjct: 112 -SASVKAGGTLAQNLYTVLVAATP-DKLPESIEVDITNLEIGDALTIADLPEHKDYEILT 169
Query: 219 KNEKMPLCKISA 230
E+ + + A
Sbjct: 170 DPEEQLVAIVEA 181
>gi|373458578|ref|ZP_09550345.1| 50S ribosomal protein L25 [Caldithrix abyssi DSM 13497]
gi|371720242|gb|EHO42013.1| 50S ribosomal protein L25 [Caldithrix abyssi DSM 13497]
Length = 213
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/200 (21%), Positives = 91/200 (45%), Gaps = 35/200 (17%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
RE G + R R QG+IPA+++ +D ++ +H ++ +L
Sbjct: 11 REDKGKSAARRYRRQGKIPAILYGED--------------------KEPVHVLVDEHDLG 50
Query: 94 FFC---STTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
+ L I+ G ++ + P+ T ++L++ F+ +++++
Sbjct: 51 IGLRGHHSVINLVIK-GKPHRCIVREVQYHPL-------TSKVLHVDFLGIQGHDKIEME 102
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
VP+ F+G G++ GG I+ L E+I +I ++V +L IGD + + D++
Sbjct: 103 VPIKFEG--KPEGVRDGGIFNEIKRILDIAVLPENIPDEIVINVDSLKIGDAIRLKDLQS 160
Query: 211 HPSWKLLSKNEKMPLCKISA 230
+++L E + +C++ A
Sbjct: 161 E-KYEVLGDPEDV-ICRVEA 178
>gi|116332055|ref|YP_801773.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira
borgpetersenii serovar Hardjo-bovis str. JB197]
gi|122280213|sp|Q04Q05.1|RL25_LEPBJ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|116125744|gb|ABJ77015.1| 50S Ribosomal protein L25 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 212
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 24/194 (12%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S H I R TG + R RS G IP + + + + K++ K +
Sbjct: 4 STIHKIAVKKRTETGKNENNRLRSSGMIPVNIIGAGVATSG----AVNEKELA----KMV 55
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
HS ++ ST L + G G KV ++ R E RI ++ F
Sbjct: 56 HSGIRQ-------STLIELDVE-GQGQQ------KVFVKEIQRFPEIDRIRHVDFYKVVP 101
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G ++ + + GV G K GG + I ++ E + + +DV++LD+GD +
Sbjct: 102 GQKIVTKIGIETTGV--AKGSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSI 159
Query: 204 FMSDIEVHPSWKLL 217
+S ++V SW++L
Sbjct: 160 KISQLKVPASWEIL 173
>gi|78042985|ref|YP_359067.1| 50S ribosomal protein L25 [Carboxydothermus hydrogenoformans
Z-2901]
gi|109893351|sp|Q3AFL7.1|RL25_CARHZ RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|77995100|gb|ABB13999.1| ribosomal protein L25 [Carboxydothermus hydrogenoformans Z-2901]
Length = 197
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 56/103 (54%), Gaps = 3/103 (2%)
Query: 130 TGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPK 189
TG+++++ F + G +++ VPV G G+K GG L+ + + C E +
Sbjct: 80 TGKLIHVDFQVVESGRKIRQLVPVELYG--EPAGVKAGGILEHGLSEVTVECLPEDLPEF 137
Query: 190 IEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATK 232
IE DVS L++GD + + D+E+ P +++ E + + ISA +
Sbjct: 138 IEADVSKLEVGDCLRVKDLELPPGVRVIEDPESI-IALISAPR 179
>gi|406982317|gb|EKE03652.1| hypothetical protein ACD_20C00172G0005 [uncultured bacterium]
Length = 200
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 35/182 (19%)
Query: 37 TGSRVSARD--------RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
TG V RD R++G++PA V+ N D S + K
Sbjct: 5 TGLAVEKRDFSKNPRQLRAEGKLPATVYGH-----NFDSVSLQLDE-------------K 46
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ + + T L+++ G G D+ L V + T I N+ F G +LK
Sbjct: 47 AFSMAYKGDKTVILELK-GDG-----DTYNALVKHVQSNAITDEIYNIEFYNVKTGEKLK 100
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL-DIGDRVFMSD 207
V VPV G P +K GG L++ ++ ++ C + I IEV +S L ++ D + + D
Sbjct: 101 VSVPVAIVG--ESPAVKAGGILRTPQSEIEIECLPKDIPSVIEVSISGLENLEDTITVGD 158
Query: 208 IE 209
I+
Sbjct: 159 IK 160
>gi|373850937|ref|ZP_09593738.1| 50S ribosomal protein L25 [Opitutaceae bacterium TAV5]
gi|372477102|gb|EHP37111.1| 50S ribosomal protein L25 [Opitutaceae bacterium TAV5]
Length = 236
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 23/184 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H + PR TG S R R +IPA+++ K+T SP Q L+ + + +
Sbjct: 6 HILTVTPRAQTGRSASRRVRKANQIPAILYG-----KHT---SP---QTLAVDAPEFTRL 54
Query: 87 LKSVELPFFCSTTFPLQ-IRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
LKS + ++ +R G L +V RD T R L++
Sbjct: 55 LKS-----LAGRSLIIELVRKDQGEKAL-----SFLQEVQRDPITDRFLHVDLQEVKADE 104
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
++ ++VPV G ES + G L +L+ C + + P IEVDV+ L G+ + +
Sbjct: 105 KMDINVPVTLTG-ESFGVKNQNGVLDINAHTLRVRCLPKDLPPHIEVDVTELKAGESIKV 163
Query: 206 SDIE 209
+I+
Sbjct: 164 GNIK 167
>gi|398974417|ref|ZP_10685044.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM25]
gi|398141619|gb|EJM30535.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM25]
Length = 200
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 83/183 (45%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEARSDLGKGASRRLRRLAALVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G+ +V++ + + P K G +++ FV G +
Sbjct: 51 AKLLENEAAYSHVIELNV-GGTKQNVIIKALQRHPAK-------GHVMHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F E+ P +KKGG + + ++ C + + IEVD++N +IG V +S
Sbjct: 103 LTAIVPVHFIN-EAAP-VKKGGEISHVVAEIEVSCLPKDLPEFIEVDLANAEIGTIVHLS 160
Query: 207 DIE 209
D++
Sbjct: 161 DLK 163
>gi|332687114|ref|YP_004456888.1| 50S ribosomal protein L25 [Melissococcus plutonius ATCC 35311]
gi|332371123|dbj|BAK22079.1| LSU ribosomal protein L25p [Melissococcus plutonius ATCC 35311]
Length = 209
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 43/182 (23%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R +G++PA+V+ ++ KS+ P F L I
Sbjct: 22 RRKGKVPAIVYGHEI---------------------------KSI--PIFFDEKELLYIL 52
Query: 106 AGSGSSVLL----DSGKVLPIKVHRDEET----GRILNLVFVWADDGTELKVDVPVVFKG 157
+GS+V++ ++ K+ + + +T R + V ++ TE++ DV V G
Sbjct: 53 HNNGSNVVITMTINNKKINTLLTNTQLDTFNKQMRHAEFLSVNMNEATEVETDV--VLTG 110
Query: 158 VESCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
G+K GG L +++ T L P E + IEVD+SNL IG+ + + D+ +P+++L
Sbjct: 111 --EASGVKAGGILTQNLYTILVSTTP-EQLPENIEVDISNLGIGEAITVGDLPKNPTYEL 167
Query: 217 LS 218
++
Sbjct: 168 VT 169
>gi|255020869|ref|ZP_05292925.1| LSU ribosomal protein L25p [Acidithiobacillus caldus ATCC 51756]
gi|254969660|gb|EET27166.1| LSU ribosomal protein L25p [Acidithiobacillus caldus ATCC 51756]
Length = 209
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 43/86 (50%)
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIE 191
+L++ F+ G + + VP+ F+ +C G+K GG L ++ P + I
Sbjct: 89 EVLHVDFLRVHAGERVTLHVPIHFENEATCVGVKSGGVLHRALVEVEVEAPVGQLPEAIV 148
Query: 192 VDVSNLDIGDRVFMSDIEVHPSWKLL 217
VD++ L +G+ + +S I V KL+
Sbjct: 149 VDIAQLQVGESIHLSQITVPAGVKLV 174
>gi|418295016|ref|ZP_12906891.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
gi|379066374|gb|EHY79117.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri ATCC 14405 = CCUG 16156]
Length = 205
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R+ +PAV++ D ++P IL+ +
Sbjct: 5 TLNAQVRSDLGKGASRRLRRNAALVPAVIYGGD--------KAPQSISILAKD------F 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G SVL+ + + P K +L+ FV G +
Sbjct: 51 AKLLENEASFSHVLNLNVD-GQNESVLIKALQRHPAK-------SFVLHADFVRVVAGHK 102
Query: 147 LKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L VP+ F ES G+K+ GG + ++ C + + IEVD++N+++G + M
Sbjct: 103 LTATVPLHFINQESSVGVKQQGGEILHNLNEVEVSCLPQDLPEFIEVDMANVEVGQVLHM 162
Query: 206 SDIEVHPSWKL--LSKNEKMPLCKISATKL 233
+DI++ +L L+ +P+ + A ++
Sbjct: 163 TDIKLPKGVELVALAHGSDLPVANVHAPRV 192
>gi|378952828|ref|YP_005210316.1| 50S ribosomal protein L25 [Pseudomonas fluorescens F113]
gi|359762842|gb|AEV64921.1| LSU ribosomal protein L25p [Pseudomonas fluorescens F113]
Length = 200
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ + ++P +L+ E +
Sbjct: 5 TLNAEVRSDLGKGASRRLRRLASLVPAVVYGGE--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L I G+ +V++ + + P K G +++ FV G +
Sbjct: 51 AKLLENEAAYSHIIELNI-GGTKQNVVIKALQRHPAK-------GHVMHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E+ P +KKGG + + + ++ C + + IEVD++N ++G + +S
Sbjct: 103 LTAIVPVHFVG-EAAP-IKKGGEISHVVSEIEVTCLPKDLPEFIEVDLANAEVGTIIHLS 160
Query: 207 DI 208
D+
Sbjct: 161 DL 162
>gi|388470876|ref|ZP_10145085.1| ribosomal protein L25, Ctc-form [Pseudomonas synxantha BG33R]
gi|388007573|gb|EIK68839.1| ribosomal protein L25, Ctc-form [Pseudomonas synxantha BG33R]
Length = 201
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 27/209 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEVRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + R G +L+ FV G +
Sbjct: 51 AKLLENDAAYSHVIELNV-GGKKQNVIIKA-------LQRHPSKGHVLHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E P +KKGG + T L+ C + + IEVD+S +IG + +S
Sbjct: 103 LTAIVPVHFVG-EEAP-VKKGGVVSHTTTELEVSCLPKDLPEFIEVDLSAAEIGTIIHLS 160
Query: 207 DIEVHPSWKL--LSKNEKMPLCKISATKL 233
D++ + L+ N+ + + A ++
Sbjct: 161 DLKAPKGVEFVALAHNDDKAVANVHAPRV 189
>gi|398335609|ref|ZP_10520314.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira
kmetyi serovar Malaysia str. Bejo-Iso9]
Length = 210
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 24/194 (12%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S H I R TG + R RS G +P + + + + K++ K +
Sbjct: 4 STIHKIAVKKRTETGKNENNRLRSSGMVPVNIIGAGVATSG----AVNEKEL----EKMV 55
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
HS ++ ST L + G G+ KV ++ R E RI ++ F
Sbjct: 56 HSGIRQ-------STLIELDVE-GQGAQ------KVFVKEIQRFPEIDRIRHVDFYKVVP 101
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G ++ + + G+ G K GG + I ++ E + + +DV++LD+GD +
Sbjct: 102 GQKIVTKIGIETTGI--AKGSKTGGQFEHIIHEIRVKTIPEDLIENLTIDVTDLDVGDAI 159
Query: 204 FMSDIEVHPSWKLL 217
+S ++V SW++L
Sbjct: 160 KISQLKVPASWEIL 173
>gi|386288630|ref|ZP_10065770.1| 50S ribosomal protein L25/general stress protein Ctc [gamma
proteobacterium BDW918]
gi|385278185|gb|EIF42157.1| 50S ribosomal protein L25/general stress protein Ctc [gamma
proteobacterium BDW918]
Length = 210
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 86/184 (46%), Gaps = 24/184 (13%)
Query: 27 HTIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
+T+ A R G S R R +G IPA+V+ + ++P Q+L+ K +
Sbjct: 5 YTVSATVRADVGKGASRRLRRLEGEIPAIVYGGE--------KAP---QMLNLIHKDLIR 53
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+L F ++ L + G SV+L + P K+ R+L+ F+ + T
Sbjct: 54 LLND---EAFYTSILTLDVD-GQKESVVLKDLQRHPAKL-------RVLHADFLRVNADT 102
Query: 146 ELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
+ + VP+ F + C G+K +GG + T ++ C + + IEVD++ ++ G +
Sbjct: 103 PITLHVPLHFLNEDICVGVKLQGGNITHAATDIEVQCLPKDLPEFIEVDMAKIETGTTLH 162
Query: 205 MSDI 208
+SD+
Sbjct: 163 ISDL 166
>gi|222149335|ref|YP_002550292.1| 50S ribosomal protein L25 [Agrobacterium vitis S4]
gi|221736319|gb|ACM37282.1| 50S ribosomal protein L25 [Agrobacterium vitis S4]
Length = 200
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 80/184 (43%), Gaps = 23/184 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G S R G IPAV++ D+++P + + E +
Sbjct: 6 YELKAETRERVGKGSSRELRRNGLIPAVIYG--------DKQAPIAITLNTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ +G + +VLP D +++ F+ ++
Sbjct: 52 TKRIHAGGFMTTVATIEV---NGEKI-----RVLPKDYQLDPVRDFTMHIDFLRVSANSQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V VPV F E +K G L +R ++ PA +I I D+ L IGD V +S
Sbjct: 104 VTVAVPVRFVN-EDKSAVKTGAVLNIVRHDVELQVPANNIPEAITFDLEGLKIGDSVHIS 162
Query: 207 DIEV 210
+++
Sbjct: 163 AVKL 166
>gi|387891951|ref|YP_006322248.1| 50S ribosomal protein L25 [Pseudomonas fluorescens A506]
gi|423689820|ref|ZP_17664340.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens SS101]
gi|387161523|gb|AFJ56722.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens A506]
gi|388002328|gb|EIK63657.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens SS101]
Length = 199
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 78/182 (42%), Gaps = 24/182 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R G S R R IPAVV+ + ++ + ++ E H I
Sbjct: 5 TLNAQARTDLGKGASRRLRHAANIPAVVYGGNKPAESVTILAKEIAKLFENEAAYSHVIE 64
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+V+ G+ +V++ + + R I++ FV G +L
Sbjct: 65 LNVD---------------GAKQNVIVKA-------MQRHPSKQFIMHADFVRVVAGQKL 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VPV F G E P +KKGG + + ++ C + + IEVD+S L+IG V +SD
Sbjct: 103 TAIVPVHFVG-EEAP-VKKGGEISHVLNEIEVTCLPKDLPEFIEVDLSALEIGAIVHLSD 160
Query: 208 IE 209
++
Sbjct: 161 LK 162
>gi|379726987|ref|YP_005319172.1| 50S ribosomal protein L25p [Melissococcus plutonius DAT561]
gi|376317890|dbj|BAL61677.1| 50S ribosomal protein L25p [Melissococcus plutonius DAT561]
Length = 209
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 43/182 (23%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R +G++PA+V+ ++ KS+ P F L I
Sbjct: 22 RRKGKVPAIVYGHEI---------------------------KSI--PIFFDEKELLYIL 52
Query: 106 AGSGSSVLL----DSGKVLPIKVHRDEET----GRILNLVFVWADDGTELKVDVPVVFKG 157
+GS+V++ ++ K+ + + +T R + V ++ TE++ DV V G
Sbjct: 53 RNNGSNVVITMTINNKKINTLLTNTQLDTFNKQMRHAEFLSVNMNEATEVETDV--VLTG 110
Query: 158 VESCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
G+K GG L +++ T L P E + IEVD+SNL IG+ + + D+ +P+++L
Sbjct: 111 --EASGVKAGGILTQNLYTILVSTTP-EQLPENIEVDISNLGIGEAITVGDLPKNPTYEL 167
Query: 217 LS 218
++
Sbjct: 168 VT 169
>gi|339048435|ref|ZP_08647364.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC2047]
gi|330722355|gb|EGH00211.1| LSU ribosomal protein L25p [gamma proteobacterium IMCC2047]
Length = 225
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 95/215 (44%), Gaps = 31/215 (14%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
++ A R+ G S R R +G IPA+V+ D ++P Q ++ K I
Sbjct: 6 SLNAQARDVLGKGSSRRLRRLEGNIPAIVYGGD--------KAP---QNITLAHK---DI 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+K+ + F + L I G+G SV++ + P K I+++ F+
Sbjct: 52 IKAADNEAFFAHIIDLNID-GNGESVIVKDMQRPPAK-------PVIMHVDFLRVRKDVA 103
Query: 147 LKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ V VP+ F + C G+K +GG + T ++ C + I+VD++N+++ V +
Sbjct: 104 INVSVPLHFINEDECKGIKLQGGVVSHNLTEVEISCLPGDLPESIDVDMANVEVDQIVHL 163
Query: 206 SDIEVHPSWKLLS-------KNEKMPLCKISATKL 233
SD+ + L + +P+ I A K+
Sbjct: 164 SDLALPKGVTLAAFSHGGDEHEHDLPVAAIHAPKV 198
>gi|116327330|ref|YP_797050.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira
borgpetersenii serovar Hardjo-bovis str. L550]
gi|122284866|sp|Q054X8.1|RL25_LEPBL RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|116120074|gb|ABJ78117.1| 50S Ribosomal protein L25 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
Length = 212
Score = 46.2 bits (108), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 82/194 (42%), Gaps = 24/194 (12%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S H I R TG + R RS G IP + + + + K++ K +
Sbjct: 4 STIHKIAVKKRTETGKNENNRLRSSGMIPVNIIGAGVATSG----AVNEKELA----KMV 55
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
HS ++ ST L + G G KV ++ R E RI ++ F
Sbjct: 56 HSGIRQ-------STLIELDVE-GQGQQ------KVFVKEIQRFPEIDRIRHVDFYKVVP 101
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G ++ + + GV G K GG + I ++ E + + +DV++LD+GD +
Sbjct: 102 GQKIVTKIGIETTGV--AKGSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSI 159
Query: 204 FMSDIEVHPSWKLL 217
+S ++V SW++L
Sbjct: 160 KISQLKVPASWEIL 173
>gi|419588039|ref|ZP_14123865.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 317/04]
gi|380570813|gb|EIA93227.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 317/04]
Length = 178
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE G + + + G + A ++ + L + N + ++ +K
Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFK--------------VNDFIK 47
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
V TT ++ GS + V+ + +D T + ++ A G K
Sbjct: 48 EVR----KKTTLAFDVKVGSQTL------NVVVVDYQKDPVTAELKHVDLKVAQKGVISK 97
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV G + GLK G L + LK C AE++ E+DVS LD+GD + + D+
Sbjct: 98 YMVPVKITG--TAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDV 155
Query: 209 EV 210
V
Sbjct: 156 VV 157
>gi|229588277|ref|YP_002870396.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fluorescens SBW25]
gi|259646693|sp|C3KCS0.1|RL25_PSEFS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|229360143|emb|CAY47000.1| putative ribosomal protein L25p family [Pseudomonas fluorescens
SBW25]
Length = 200
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 88/208 (42%), Gaps = 26/208 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R G S R R IPAVV+ + + ILS E I
Sbjct: 5 TLNAQARTDLGKGASRRLRHAANIPAVVYGGN--------KPAESVTILSKE------IA 50
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K E S L + G+ +V++ + + P K I++ FV G +L
Sbjct: 51 KLFENEAAYSHVIELNVD-GTKQNVIVKAMQRHPSK-------QFIMHADFVRVVAGQKL 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VPV F G E P +KKGG + T L+ C + + IEVD+S +IG + +SD
Sbjct: 103 TAIVPVHFVG-EDAP-VKKGGVVSHTATELEVTCLPKDLPEFIEVDLSAAEIGTIIHLSD 160
Query: 208 IEVHPSWKL--LSKNEKMPLCKISATKL 233
++ + L+ N+ + + A ++
Sbjct: 161 LKAPKGVEFVALAHNDDKAVANVHAPRV 188
>gi|335424592|ref|ZP_08553600.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinisphaera
shabanensis E1L3A]
gi|334888930|gb|EGM27225.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Salinisphaera
shabanensis E1L3A]
Length = 242
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 75/181 (41%), Gaps = 22/181 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G + R R +GR+PA+++ + +L+ E + L
Sbjct: 6 LNAEKRTAKGRAENRRLRREGRVPAIIYGGN-----------GEPVMLTLEHNDLDHHLD 54
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F S + + G V+L + P K I + F+ G L+
Sbjct: 55 N---EAFFSHIIKINVAGGGSEEVVLRDLQRHPAKPF-------IEHADFLRIVAGEALR 104
Query: 149 VDVPVVFKGVESCPGL-KKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ VP+ F G E CPG+ + G ++ ++ C ++ IEVD S L + D V +S+
Sbjct: 105 MSVPLHFVGEEECPGVADEDGVVQHNMNDIEIECLPRNLPEYIEVDCSKLHLHDSVHLSE 164
Query: 208 I 208
+
Sbjct: 165 L 165
>gi|297545174|ref|YP_003677476.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842949|gb|ADH61465.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 202
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 89/193 (46%), Gaps = 29/193 (15%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+I+AI R+ G + R + QG IP +++ +D+ + L+ E + +L
Sbjct: 5 SIEAIKRDI-GKNSARRLKKQGYIPGILYGKDMTENIP----------LAVEYNKFQRLL 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + F + + + ++V+ + + D G+I+++ F E+
Sbjct: 54 QQ----HGRNVLFNVIVDGSTHNAVVKE--------IQEDTLKGKIIHIDFQRVSMHEEI 101
Query: 148 KVDVPVVFKGVESCPGL--KKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ VP+ F+G+ GL KGG ++ L + I +I VD+S L+IGD +F+
Sbjct: 102 EATVPLKFEGI----GLIESKGGIVQHQLWELTVESLPDKIPQEIVVDLSKLEIGDTLFV 157
Query: 206 SDIEVHPSWKLLS 218
DI+V K++
Sbjct: 158 KDIQVPEGVKVID 170
>gi|383315921|ref|YP_005376763.1| 50S ribosomal protein L25 [Frateuria aurantia DSM 6220]
gi|379043025|gb|AFC85081.1| ribosomal protein L25, Ctc-form [Frateuria aurantia DSM 6220]
Length = 212
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 83/185 (44%), Gaps = 23/185 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I+A R+ G S R R +PAVV+ ++P QI + ++I
Sbjct: 5 HEIKAESRKDEGKGASRRLRHAAYVPAVVYGAG--------KAPQSIQI------EHNTI 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
L + +F S+ L I G+ VL+ + P K ++L++ F D
Sbjct: 51 LLAARHEWFFSSVLDLNID-GNVEKVLVRDWQKHPFK-------QQMLHMDFQRVDQNAL 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKS-IRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L+ +VP+ F ++ P K + S T ++ C + + IEVD+++L GD + +
Sbjct: 103 LRANVPLHFLNQDTSPAGKASHVVVSHALTEVEVTCLPKDLPEFIEVDLASLTEGDIIHL 162
Query: 206 SDIEV 210
S I++
Sbjct: 163 SQIKL 167
>gi|339324542|ref|YP_004684235.1| 50S ribosomal protein L25 [Cupriavidus necator N-1]
gi|338164699|gb|AEI75754.1| 50S ribosomal protein L25 [Cupriavidus necator N-1]
Length = 205
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 83/197 (42%), Gaps = 23/197 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G+ S R R+ G+ P +++ + K I H++ K
Sbjct: 3 VVAFERSVQGTGASRRLRNSGKTPGIIYGG----------AAEPKMIELDHNALWHALKK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
F S+ L++ AG LL + ++ P K +L++ F ++
Sbjct: 53 EA----FHSSILELEV-AGKSEQALLRAFQMHPFK-------PLVLHVDFQRVSANDKIH 100
Query: 149 VDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F E+ PG+K G G + I L+ C + IEVD++ ++ + +SD
Sbjct: 101 VKVPLHFMNQETAPGVKLGHGIVNHIVNDLEVSCLPADLPEFIEVDLAAAELNQTLHLSD 160
Query: 208 IEVHPSWKLLSKNEKMP 224
I++ +++ + P
Sbjct: 161 IKLPKGVTVITHGDDNP 177
>gi|387819381|ref|YP_005679728.1| ribosomal protein L25 general stress protein [Clostridium botulinum
H04402 065]
gi|322807425|emb|CBZ04999.1| ribosomal protein L25 general stress protein [Clostridium botulinum
H04402 065]
Length = 178
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 33/180 (18%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R C S RD G++P +++ ++L + +++S++ V
Sbjct: 9 RNCKNSNKVRRD---GKVPGIIYGKNL-----------NNLMFEVGEIELNSMISQVGEH 54
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVD 150
+ G+ VL+ + P+K +H D E + + +
Sbjct: 55 GVTDINY-----EGTDYKVLIKEVQKDPVKKNVIHIDLEN---------VTNSSNLINAE 100
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+P++F G + +KKGG ++ + S+K CP E + I VD+S DIG +SD+E+
Sbjct: 101 IPILFSGDDLI--MKKGGIVQKEKNSVKVRCPEEKLPNNIMVDLSQYDIGKTFRISDLEL 158
>gi|410471584|ref|YP_006894865.1| 50S ribosomal protein L25 [Bordetella parapertussis Bpp5]
gi|408441694|emb|CCJ48181.1| 50S ribosomal protein L25 [Bordetella parapertussis Bpp5]
Length = 204
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 22/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
A R GS S R R GR+PA+V+ N + + +I+ L+
Sbjct: 3 FNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLN-----------IELDHNEIYHALR 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
E F ++ + ++ G V L S I+ H + +++++ F D L
Sbjct: 52 KEE---FHASILNMVLKGGKTEEVRLRS-----IQWHAYKP--QVMHVDFQRVDANQALH 101
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VP+ F E P +K G + + T L C + IEV++ +L G + ++D
Sbjct: 102 TKVPLHFVNAEVSPAVKLSGAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLAD 161
Query: 208 IEV 210
I++
Sbjct: 162 IKL 164
>gi|395794819|ref|ZP_10474135.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. Ag1]
gi|421138182|ref|ZP_15598252.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fluorescens BBc6R8]
gi|323388152|gb|ADX60348.1| 50S ribosomal protein L25 noteral stress protein Ctc [Pseudomonas
fluorescens]
gi|395340980|gb|EJF72805.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. Ag1]
gi|404510605|gb|EKA24505.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fluorescens BBc6R8]
Length = 199
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 82/183 (44%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ + ++P +L+ E I
Sbjct: 5 TLNAELRSDLGKGASRRLRRLASLVPAVVYGGE--------KAPESISMLAKE------I 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G+ +V++ + + R G +L+ FV G +
Sbjct: 51 AKLLENDAAYSHIIELNV-GGTKQNVIIKA-------LQRHPAKGHVLHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E P +KKGG + + ++ C + + IEVD+S L+IG V +S
Sbjct: 103 LTAIVPVHFVG-EEAP-VKKGGEVSHVIAEIEVTCLPKDLPEFIEVDLSALEIGAIVHLS 160
Query: 207 DIE 209
D++
Sbjct: 161 DLK 163
>gi|170757176|ref|YP_001782751.1| 50S ribosomal protein L25 [Clostridium botulinum B1 str. Okra]
gi|429246436|ref|ZP_19209756.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
botulinum CFSAN001628]
gi|169122388|gb|ACA46224.1| 50S ribosomal protein L25 [Clostridium botulinum B1 str. Okra]
gi|428756526|gb|EKX79078.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
botulinum CFSAN001628]
Length = 178
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 33/180 (18%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R C S RD G++P +++ ++L + ++++++ V
Sbjct: 9 RNCKNSNKVRRD---GKVPGIIYGKNL-----------NNLMFEVGEIELNNMISQVGEH 54
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVD 150
+ G+ VL+ + P+K +H D E + + +
Sbjct: 55 GVTDINY-----EGTDYKVLIKEVQKDPVKKNVIHIDLEN---------VTNSSNLINAE 100
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+P++F G E +KKGG ++ + S+K CP E + I +D+S DIG +SD+E+
Sbjct: 101 IPILFSGDELI--MKKGGVVQKEKNSVKVRCPEEKLPNNIMIDLSQYDIGKTFRISDLEL 158
>gi|399117243|emb|CCG20057.1| 50S ribosomal protein L25 [Taylorella asinigenitalis 14/45]
Length = 212
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQ-IHSILKS 89
A R GS S R R +GR+P +V+ N D +I RKQ HS L
Sbjct: 5 AKARSVQGSSASRRLRREGRLPGIVYGGKGEPLNIDL---DHNEIFHALRKQEFHSSLLE 61
Query: 90 VELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKV 149
++L G +VLL + + P K ++L++ F+ + G +
Sbjct: 62 MDL-------------DGKTETVLLRAVQWHPYK-------PQVLHIDFLRIERGQPITT 101
Query: 150 DVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+P+ F E+ P +K G + I T ++ C + + +I VD+ L+ + +S I
Sbjct: 102 KIPLHFINDENSPAVKLHGNLISKIVTEIEVTCLPKDLPSEIVVDLGELEADSVIHLSSI 161
Query: 209 EVHPSWKLLSKNEKMPLCKISAT 231
+ + ++ + L SA+
Sbjct: 162 KAPEGVEFVAHGHEEDLVLASAS 184
>gi|348589678|ref|YP_004874140.1| 50S ribosomal protein L25p [Taylorella asinigenitalis MCE3]
gi|347973582|gb|AEP36117.1| LSU ribosomal protein L25p [Taylorella asinigenitalis MCE3]
Length = 212
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 25/203 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQ-IHSILKS 89
A R GS S R R +GR+P +V+ N D +I RKQ HS L
Sbjct: 5 AKARSVQGSSASRRLRREGRLPGIVYGGKGEPLNIDL---DHNEIFHALRKQEFHSSLLE 61
Query: 90 VELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKV 149
++L G +VLL + + P K ++L++ F+ + G +
Sbjct: 62 MDL-------------DGKTETVLLRAVQWHPYK-------PQVLHIDFLRIERGQPITT 101
Query: 150 DVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+P+ F E+ P +K G + I T ++ C + + +I VD+ L+ + +S I
Sbjct: 102 KIPLHFINDENSPAVKLHGNLISKIVTEIEVTCLPKDLPSEIVVDLGELEADSVIHLSSI 161
Query: 209 EVHPSWKLLSKNEKMPLCKISAT 231
+ + ++ + L SA+
Sbjct: 162 KAPEGVEFVAHGHEEDLVLASAS 184
>gi|92113647|ref|YP_573575.1| 50S ribosomal protein L25 [Chromohalobacter salexigens DSM 3043]
gi|122420093|sp|Q1QXD2.1|RL25_CHRSD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|91796737|gb|ABE58876.1| LSU ribosomal protein L25P [Chromohalobacter salexigens DSM 3043]
Length = 215
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 11/151 (7%)
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
+ K++E F S+ + + S ++ D + R + + F+ D
Sbjct: 49 AFYKAIEDEAFFSSVINIDLEGQSEQVIIRD--------IQRHPYKALVTHADFMRVDAT 100
Query: 145 TELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
E+ ++VP+ G E+C G+K + G L + ++ C + +EVDV+NL +G+ +
Sbjct: 101 HEITMNVPLHINGEEACKGVKDEDGVLHVLANDVEISCLPGKLPEYLEVDVTNLGLGETL 160
Query: 204 FMSDIEVHPSWKL--LSKNEKMPLCKISATK 232
+SD+ + L LS E+ +S T+
Sbjct: 161 HLSDLPLPEGVSLVALSHGEEHDFGVVSVTR 191
>gi|440739078|ref|ZP_20918600.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fluorescens BRIP34879]
gi|447915101|ref|YP_007395669.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
poae RE*1-1-14]
gi|440380450|gb|ELQ17017.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fluorescens BRIP34879]
gi|445198964|gb|AGE24173.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
poae RE*1-1-14]
Length = 203
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 90/209 (43%), Gaps = 27/209 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAELRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + R G +L+ F+ G +
Sbjct: 51 AKLLENDAAYSHVIELNV-GGKKQNVIIKA-------LQRHPSKGHVLHADFIRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E P +KKGG + T L+ C + + IEVD+S +IG + +S
Sbjct: 103 LTAIVPVHFIG-EEAP-VKKGGVVSHTTTELEVTCLPKDLPEFIEVDLSAAEIGTIIHLS 160
Query: 207 DIEVHPSWKL--LSKNEKMPLCKISATKL 233
D++ + L+ N+ + + A ++
Sbjct: 161 DLKAPKGVEFVALAHNDDKAVANVHAPRV 189
>gi|225848300|ref|YP_002728463.1| 50S ribosomal protein L25/general stress protein Ctc
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644287|gb|ACN99337.1| ribosomal protein L25, Ctc-form [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 196
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G E ++VPV F G G++KGG ++ S+ ++I KI VDVSNLDIGD +
Sbjct: 98 GVEFDIEVPVEFVG--KAKGVEKGGIFEAHLHSIIVRTEPKNIPEKIVVDVSNLDIGDVL 155
Query: 204 FMSDIEVHPSWKLLSKNEKM 223
+ DI K+++ +++
Sbjct: 156 HVRDITPPEGVKIMTHGDEV 175
>gi|33594045|ref|NP_881689.1| 50S ribosomal protein L25 [Bordetella pertussis Tohama I]
gi|384205348|ref|YP_005591087.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
pertussis CS]
gi|408416590|ref|YP_006627297.1| 50S ribosomal protein L25 [Bordetella pertussis 18323]
gi|71153126|sp|Q7VUH2.1|RL25_BORPE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|33564119|emb|CAE43391.1| 50S ribosomal protein L25 [Bordetella pertussis Tohama I]
gi|332383462|gb|AEE68309.1| 50S ribosomal protein L25/general stress protein Ctc [Bordetella
pertussis CS]
gi|401778760|emb|CCJ64214.1| 50S ribosomal protein L25 [Bordetella pertussis 18323]
Length = 208
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 22/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
A R GS S R R GR+PA+V+ N + + +I+ L+
Sbjct: 7 FNATARSVQGSSASRRLRRAGRVPAIVYGGTAAPLNIE-----------LDHNEIYHALR 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
E F + + I G VLL S V +++++ F + L
Sbjct: 56 KEE---FHALILNMVIEGGKTEEVLLRS-------VQWHAYKPQVMHVDFQRVEANQALH 105
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VP+ F E P +K G + + T L C + IEV++ +L G + ++D
Sbjct: 106 TKVPLHFINAEVSPAVKLSGAIISHVLTELDITCLPALLPQFIEVNLGDLLGGGSIHLAD 165
Query: 208 IEV 210
I++
Sbjct: 166 IKL 168
>gi|391228936|ref|ZP_10265142.1| ribosomal protein L25, Ctc-form [Opitutaceae bacterium TAV1]
gi|391218597|gb|EIP97017.1| ribosomal protein L25, Ctc-form [Opitutaceae bacterium TAV1]
Length = 238
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 37/198 (18%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H + PR TG S R R +IPA+++ K+T SP Q L+ + + +
Sbjct: 6 HILTVTPRAQTGRSASRRVRKANQIPAILYG-----KHT---SP---QTLAVDAPEFTRL 54
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLD------SGKVLPI--KVHRDEETGRILNLVF 138
LKS+ +G S++++ K L +V RD T R L++
Sbjct: 55 LKSL-----------------AGRSLIIELVRKDQDEKALSFLQEVQRDPITDRFLHVDL 97
Query: 139 VWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLD 198
++ ++VPV G ES + G L +L+ C + + P+IEVDV+ L
Sbjct: 98 QEVKADEKMDINVPVTLTG-ESFGVKNQNGVLDINAHTLRVRCLPKDLPPQIEVDVTELK 156
Query: 199 IGDRVFMSDIEVHPSWKL 216
G+ + + +I+ +L
Sbjct: 157 AGESIKVGNIKAPAGVEL 174
>gi|283955736|ref|ZP_06373227.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 1336]
gi|283792691|gb|EFC31469.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 1336]
Length = 178
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE G + + + G + A ++ + L + N + ++ +K
Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFK--------------VNEFIK 47
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
V TT ++ GS + V+ + +D T + ++ A G K
Sbjct: 48 EVR----KKTTLIFDVKVGSKTL------SVVVVDYQKDPVTAELKHVDLKVAQKGVISK 97
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV G + GLK G L + LK C AE++ E+DVS LD+GD + + DI
Sbjct: 98 YMVPVKITG--TAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDI 155
Query: 209 EV 210
V
Sbjct: 156 VV 157
>gi|170760837|ref|YP_001788437.1| 50S ribosomal protein L25 [Clostridium botulinum A3 str. Loch
Maree]
gi|169407826|gb|ACA56237.1| 50S ribosomal protein L25 [Clostridium botulinum A3 str. Loch
Maree]
Length = 178
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 76/180 (42%), Gaps = 33/180 (18%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R C S RD G++P +++ ++L + +++S++ V
Sbjct: 9 RNCKNSNKVRRD---GKVPGIIYGKNL-----------NNLMFEVGEIELNSMISQVGEH 54
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVD 150
+ G+ VL+ + P+K +H D E + + +
Sbjct: 55 GVTDINY-----EGTDYKVLIKEVQKDPVKKNVIHIDLEN---------VTNSSNLVNAE 100
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+P++F G E +KKGG ++ + S+K CP E + I +D+S DIG +SD+E+
Sbjct: 101 IPILFSGDELI--MKKGGVVQKEKDSVKVRCPEEKLPNNIMIDLSQYDIGKTFRISDLEL 158
>gi|424795616|ref|ZP_18221442.1| 50S ribosomal protein L25 [Xanthomonas translucens pv. graminis
ART-Xtg29]
gi|422795381|gb|EKU24089.1| 50S ribosomal protein L25 [Xanthomonas translucens pv. graminis
ART-Xtg29]
Length = 215
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 80/188 (42%), Gaps = 29/188 (15%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I+ RE G S R R G IPA+V+ +L P Q+ E +
Sbjct: 5 HEIKVQRREVEGKGASRRLRRDGLIPAIVYGGEL--------KPVNIQLNHNE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ + +F S+ L + D KVL + R IL++ F +D
Sbjct: 51 WLASQNDWFYSSILSLSLNG--------DIQKVLLRDMQRHPFKQLILHIDFQRVNDNEV 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRT----SLKYLCPAEHISPKIEVDVSNLDIGDR 202
L VP+ F +S P G ++ + T ++ +C + + +EVD+S L +GD
Sbjct: 103 LHASVPLHFLNEDSSPA---GKSVEVVVTHELNEIQVVCLPKDLPEFVEVDLSALSVGDV 159
Query: 203 VFMSDIEV 210
+ +SD+++
Sbjct: 160 IHLSDLKL 167
>gi|339495315|ref|YP_004715608.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
gi|338802687|gb|AEJ06519.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri ATCC 17588 = LMG 11199]
Length = 205
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 26/210 (12%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R+ +PAV++ D ++P IL+ + +
Sbjct: 5 TLNAQVRSDLGKGASRRLRRNAALVPAVIYGGD--------KAPQSISILAKD------L 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G SVL+ + + P K +L+ FV G +
Sbjct: 51 AKLLENEASFSHVLSLNVD-GQNESVLIKALQRHPAK-------SFVLHADFVRVVAGHK 102
Query: 147 LKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L VP+ F E+ G+K+ GG + ++ C + + IEVD++N+++G + M
Sbjct: 103 LTATVPLHFINQETSVGVKQQGGEILHNLNEVEVSCLPQDLPEFIEVDMANVEVGQVLHM 162
Query: 206 SDIEVHPSWKL--LSKNEKMPLCKISATKL 233
+DI++ +L L+ +P+ + A ++
Sbjct: 163 TDIKLPKGVELVSLAHGSDLPVANVHAPRV 192
>gi|255971277|ref|ZP_05421863.1| ribosomal protein L25 [Enterococcus faecalis T1]
gi|255962295|gb|EET94771.1| ribosomal protein L25 [Enterococcus faecalis T1]
Length = 202
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 91/192 (47%), Gaps = 39/192 (20%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILST----ERKQIHSILKSVELPFFCSTTFP 101
R +G++PA+V+ QI ST E K + IL+ +T
Sbjct: 22 RHEGKVPAIVYGY---------------QIESTPIYFEEKDLSKILRE----HGVNTVIK 62
Query: 102 LQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD--DGTELKVDVPVVFKGVE 159
+ + G + L+ K D TG++L++ F+ + + TE++ +V ++ +
Sbjct: 63 MTVD-GKNINTLMS-------KAQLDTFTGQMLHVEFLSVNMKETTEVEAEVQLIGE--- 111
Query: 160 SCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
G+K GG L +++ T L P + + IEVD++NL+IGD + ++ + H +++L+
Sbjct: 112 -SAGVKAGGTLAQNLYTVLVAATP-DKLPESIEVDITNLEIGDALTIAHLPEHKDYEILT 169
Query: 219 KNEKMPLCKISA 230
E+ + + A
Sbjct: 170 DPEEQLVAIVEA 181
>gi|187776969|ref|ZP_02993442.1| hypothetical protein CLOSPO_00513 [Clostridium sporogenes ATCC
15579]
gi|187775628|gb|EDU39430.1| ribosomal protein L25, Ctc-form [Clostridium sporogenes ATCC 15579]
Length = 178
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 77/180 (42%), Gaps = 33/180 (18%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R C S + R +G++P +++ ++L + +++S++ V
Sbjct: 9 RNCKNSN---KIRREGKVPGIIYGKNL-----------NNLMFEVGEIELNSMISQVGEH 54
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVD 150
+ G+ VL+ + P+K +H D E + + +
Sbjct: 55 GVTDVNY-----GGADYKVLIKEVQKDPVKKNVIHIDLEN---------VTNSSNLINAE 100
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+P++F G E +KKGG ++ + S+K CP E + I +D+S +IG +SD+E+
Sbjct: 101 IPILFSGDELI--MKKGGVVQKEKNSVKVRCPEEKLPNNIMIDLSQYNIGKTFRISDLEL 158
>gi|62185394|ref|YP_220179.1| 50S ribosomal protein L25 [Chlamydophila abortus S26/3]
gi|424825437|ref|ZP_18250424.1| 50S ribosomal protein L25 [Chlamydophila abortus LLG]
gi|81312456|sp|Q5L563.1|RL25_CHLAB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|62148461|emb|CAH64231.1| putative 50S ribosomal protein L25 [Chlamydophila abortus S26/3]
gi|333410536|gb|EGK69523.1| 50S ribosomal protein L25 [Chlamydophila abortus LLG]
Length = 185
Score = 45.8 bits (107), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 81/179 (45%), Gaps = 23/179 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSILKSVE 91
RE + + R G IPAV+++ + L + D S+ L S+E
Sbjct: 8 RETDKKSLLKKIRQTGGIPAVIYSGGKSLANIVVDAHVFSK-------------FLSSLE 54
Query: 92 LPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDV 151
ST F L + +++ D I+ H + R+++L F + ++K+ +
Sbjct: 55 SGALSSTIFSLSYEGRTIKALVKD------IQYH--VTSYRVIHLDFEELIEDRDVKLKI 106
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
P+ C G+K GG L+ + +L+ +C + I P +E+DV +L + +SDI++
Sbjct: 107 PIRCINAVDCVGVKLGGSLRQVIRALRVVCKPKDIVPYLELDVRSLGLSQTRKLSDIQI 165
>gi|431926267|ref|YP_007239301.1| 50S ribosomal protein L25 [Pseudomonas stutzeri RCH2]
gi|431824554|gb|AGA85671.1| LSU ribosomal protein L25P [Pseudomonas stutzeri RCH2]
Length = 205
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 92/210 (43%), Gaps = 26/210 (12%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R+ +PAV++ D ++P IL+ +
Sbjct: 5 TLNAQVRSDLGKGASRRLRRNAALVPAVIYGGD--------KAPQSISILAKD------F 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G SVL+ + + P K +L+ FV G +
Sbjct: 51 AKLLENEASFSHVLNLNVD-GQNESVLIKALQRHPAK-------SFVLHADFVRVVAGHK 102
Query: 147 LKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L VP+ F ES G+KK GG + ++ C + + IEVD+ N+++G + M
Sbjct: 103 LTATVPLHFINQESSVGVKKQGGEILHNLNEVEVSCLPQDLPEFIEVDMINVEVGQVLHM 162
Query: 206 SDIEVHPSWKL--LSKNEKMPLCKISATKL 233
+DI++ +L L+ +P+ + A ++
Sbjct: 163 TDIKLPKGVELVALAHGSDLPVANVHAPRV 192
>gi|410624789|ref|ZP_11335579.1| large subunit ribosomal protein L25 [Glaciecola mesophila KMM 241]
gi|410155635|dbj|GAC22348.1| large subunit ribosomal protein L25 [Glaciecola mesophila KMM 241]
Length = 213
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R G S R R + ++PAV++ L K + S ++ +
Sbjct: 7 TLDAEVRTDLGKGASRRLRHEDKVPAVLYG---LGKEAVSLTLSHNKVFQAQ-------- 55
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
E F S L + +V+ D + P K R+ +L F+ D L
Sbjct: 56 ---EFEAFYSHVLTLNVDGKKVEAVIKDMQR-HPFK-------PRVTHLDFLRVDAKQAL 104
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ +VP+ F E +K GG+ + ++ C + IEVDV+N+++G + +S
Sbjct: 105 QTNVPLHFVNEEKAESIKTHGGHAEHHMVDVEISCLPADLPEFIEVDVTNVELGQTLHLS 164
Query: 207 DI 208
DI
Sbjct: 165 DI 166
>gi|410582393|ref|ZP_11319499.1| LSU ribosomal protein L25P [Thermaerobacter subterraneus DSM 13965]
gi|410505213|gb|EKP94722.1| LSU ribosomal protein L25P [Thermaerobacter subterraneus DSM 13965]
Length = 210
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 89/196 (45%), Gaps = 26/196 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
++A+PRE +R R R +G +PAV++ PS + + ++ H +L
Sbjct: 4 VLRAVPREPGHAR---RVRREGGLPAVLYG------------PSGNFPVRLDAREFHRLL 48
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
S + ++ GS S+ S V ++ H G +L++ + +
Sbjct: 49 ASGRARGILTVEL---VQDGSTRSL---SAMVKELQYH--PARGDLLHVDLFEVREDEPV 100
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ +VP+V +GVE +K G L+ L+ H+ +E DV+ L +G+ + + D
Sbjct: 101 RAEVPIVLRGVEEA---EKRGILQHQLAELEIESLPRHMPAAVEGDVARLPVGEELRVRD 157
Query: 208 IEVHPSWKLLSKNEKM 223
+EV ++L+ +++
Sbjct: 158 LEVPAQVRVLNDPDEI 173
>gi|415883945|ref|ZP_11545974.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
methanolicus MGA3]
gi|387591740|gb|EIJ84057.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
methanolicus MGA3]
Length = 211
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 32/192 (16%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R QG IPAV++ + K S K ++ T RK + + S+++
Sbjct: 22 REQGNIPAVIYGSGVESKPI---YVSAKDLIKTIRKVGRNGIISLDI------------- 65
Query: 106 AGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCP 162
G V+L + P+K +H D F D +E+ DV + G
Sbjct: 66 NGDQHQVILREYQEDPLKKELIHAD----------FRAVDMSSEIDADVRIDLVG--EAA 113
Query: 163 GLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEK 222
G+K GG L+ SL I IEVDV+NL +G+ + ++DI+ ++ ++ +E+
Sbjct: 114 GVKDGGVLQQPLHSLSITAKPGDIPNSIEVDVTNLQVGEALTIADIKADKPYQ-INHDEE 172
Query: 223 MPLCKISATKLE 234
+C I K E
Sbjct: 173 EVICSILPPKQE 184
>gi|57237362|ref|YP_178375.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni RM1221]
gi|86149073|ref|ZP_01067305.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86151425|ref|ZP_01069640.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 260.94]
gi|86153932|ref|ZP_01072135.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88597453|ref|ZP_01100688.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 84-25]
gi|153950943|ref|YP_001398644.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. doylei 269.97]
gi|157414608|ref|YP_001481864.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 81116]
gi|205356039|ref|ZP_03222807.1| ctc protein [Campylobacter jejuni subsp. jejuni CG8421]
gi|218561970|ref|YP_002343749.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni NCTC
11168 = ATCC 700819]
gi|315123880|ref|YP_004065884.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|317509971|ref|ZP_07967488.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni
305]
gi|384440965|ref|YP_005657268.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni M1]
gi|384442645|ref|YP_005658897.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni S3]
gi|384447600|ref|YP_005655651.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni IA3902]
gi|403055093|ref|YP_006632498.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|407941758|ref|YP_006857398.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni PT14]
gi|415729937|ref|ZP_11472729.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|415746892|ref|ZP_11475677.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni
327]
gi|419537036|ref|ZP_14076506.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 111-3]
gi|419545954|ref|ZP_14084718.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2680]
gi|419548812|ref|ZP_14087425.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2685]
gi|419564627|ref|ZP_14102005.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1098]
gi|419568417|ref|ZP_14105556.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1417]
gi|419579998|ref|ZP_14116382.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1948]
gi|419580913|ref|ZP_14117228.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1957]
gi|419583029|ref|ZP_14119220.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1961]
gi|419584800|ref|ZP_14120865.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 202/04]
gi|419586638|ref|ZP_14122597.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 67-8]
gi|419591939|ref|ZP_14127271.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 37/05]
gi|419595715|ref|ZP_14130812.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 23336]
gi|419596335|ref|ZP_14131340.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 23341]
gi|419598763|ref|ZP_14133639.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 23342]
gi|419604177|ref|ZP_14138651.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 9853]
gi|419608105|ref|ZP_14142303.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli H6]
gi|419611965|ref|ZP_14145852.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli H9]
gi|419613783|ref|ZP_14147577.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli H56]
gi|419619846|ref|ZP_14153304.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 51494]
gi|419621875|ref|ZP_14155120.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23216]
gi|419624307|ref|ZP_14157416.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23218]
gi|419625354|ref|ZP_14158370.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23223]
gi|419627556|ref|ZP_14160457.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23263]
gi|419629414|ref|ZP_14162141.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 60004]
gi|419632171|ref|ZP_14164729.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23264]
gi|419633938|ref|ZP_14166356.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23269]
gi|419637192|ref|ZP_14169370.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 9879]
gi|419638762|ref|ZP_14170814.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 86605]
gi|419643479|ref|ZP_14175209.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni ATCC 33560]
gi|419644286|ref|ZP_14175870.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 9081]
gi|419646222|ref|ZP_14177693.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 53161]
gi|419647846|ref|ZP_14179199.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 9217]
gi|419649562|ref|ZP_14180800.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 2008-1025]
gi|419652370|ref|ZP_14183449.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 2008-894]
gi|419654174|ref|ZP_14185121.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 2008-872]
gi|419655928|ref|ZP_14186761.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 2008-988]
gi|419657597|ref|ZP_14188247.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1997-1]
gi|419661429|ref|ZP_14191755.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 2008-831]
gi|419664157|ref|ZP_14194326.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1997-4]
gi|419665310|ref|ZP_14195380.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1997-7]
gi|419666738|ref|ZP_14196730.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1997-10]
gi|419670135|ref|ZP_14199880.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1997-11]
gi|419670560|ref|ZP_14200247.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1997-14]
gi|419673548|ref|ZP_14203012.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 51037]
gi|419675157|ref|ZP_14204431.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 110-21]
gi|419676995|ref|ZP_14206157.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 87330]
gi|419678833|ref|ZP_14207867.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 87459]
gi|419681348|ref|ZP_14210186.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 140-16]
gi|419684036|ref|ZP_14212648.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1577]
gi|419686743|ref|ZP_14215168.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1798]
gi|419687837|ref|ZP_14216172.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1854]
gi|419691089|ref|ZP_14219270.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1893]
gi|419691387|ref|ZP_14219509.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1928]
gi|419694457|ref|ZP_14222422.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 9872]
gi|419695973|ref|ZP_14223852.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23210]
gi|419697522|ref|ZP_14225254.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23211]
gi|424847142|ref|ZP_18271724.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni NW]
gi|424848689|ref|ZP_18273169.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni D2600]
gi|68053031|sp|Q5HWG0.1|RL25_CAMJR RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153129|sp|Q9PII8.1|RL25_CAMJE RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|166223672|sp|A7H564.1|RL25_CAMJD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|172047037|sp|A8FKA0.1|RL25_CAMJ8 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|57166166|gb|AAW34945.1| ribosomal protein L25 [Campylobacter jejuni RM1221]
gi|85840431|gb|EAQ57688.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85841772|gb|EAQ59019.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 260.94]
gi|85842893|gb|EAQ60105.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|88190514|gb|EAQ94488.1| ribosomal protein L25 [Campylobacter jejuni subsp. jejuni 84-25]
gi|112359676|emb|CAL34462.1| putative 50S ribosomal protein L25 (general stress protein Ctc)
[Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC
700819]
gi|152938389|gb|ABS43130.1| ribosomal protein L25 [Campylobacter jejuni subsp. doylei 269.97]
gi|157385572|gb|ABV51887.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni
81116]
gi|205346163|gb|EDZ32798.1| ctc protein [Campylobacter jejuni subsp. jejuni CG8421]
gi|284925583|gb|ADC27935.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni IA3902]
gi|307747248|gb|ADN90518.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni M1]
gi|315017602|gb|ADT65695.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315057732|gb|ADT72061.1| LSU ribosomal protein L25p [Campylobacter jejuni subsp. jejuni S3]
gi|315928388|gb|EFV07702.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315930528|gb|EFV09571.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni
305]
gi|315931612|gb|EFV10578.1| ribosomal protein L25, Ctc-form [Campylobacter jejuni subsp. jejuni
327]
gi|356485429|gb|EHI15422.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni NW]
gi|356488025|gb|EHI17961.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni D2600]
gi|380516634|gb|EIA42763.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 111-3]
gi|380523361|gb|EIA49012.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2680]
gi|380526935|gb|EIA52357.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 2685]
gi|380542216|gb|EIA66458.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1098]
gi|380545683|gb|EIA69653.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1417]
gi|380555721|gb|EIA79019.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1948]
gi|380560165|gb|EIA83264.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1957]
gi|380563404|gb|EIA86242.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 202/04]
gi|380564273|gb|EIA87086.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1961]
gi|380565879|gb|EIA88584.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 67-8]
gi|380567227|gb|EIA89761.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 37/05]
gi|380573119|gb|EIA95279.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 23336]
gi|380576381|gb|EIA98437.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 23341]
gi|380576857|gb|EIA98903.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 23342]
gi|380580828|gb|EIB02565.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli LMG 9853]
gi|380586013|gb|EIB07334.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli H6]
gi|380591466|gb|EIB12446.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli H9]
gi|380593676|gb|EIB14496.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli H56]
gi|380598725|gb|EIB19114.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23218]
gi|380600767|gb|EIB21093.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23216]
gi|380602137|gb|EIB22430.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 51494]
gi|380604825|gb|EIB24823.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23223]
gi|380606612|gb|EIB26514.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23263]
gi|380608055|gb|EIB27886.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 60004]
gi|380609287|gb|EIB28966.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23264]
gi|380610567|gb|EIB30153.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23269]
gi|380615751|gb|EIB34984.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 9879]
gi|380618091|gb|EIB37240.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 86605]
gi|380621416|gb|EIB40220.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni ATCC 33560]
gi|380622285|gb|EIB41046.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 9081]
gi|380623934|gb|EIB42612.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 53161]
gi|380627067|gb|EIB45485.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 9217]
gi|380629649|gb|EIB47905.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 2008-894]
gi|380630095|gb|EIB48340.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 2008-1025]
gi|380631660|gb|EIB49829.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 2008-872]
gi|380634575|gb|EIB52450.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1997-1]
gi|380636207|gb|EIB53932.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 2008-988]
gi|380640185|gb|EIB57645.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 2008-831]
gi|380641476|gb|EIB58824.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1997-4]
gi|380643640|gb|EIB60858.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1997-7]
gi|380645397|gb|EIB62447.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1997-11]
gi|380647188|gb|EIB64112.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1997-10]
gi|380650444|gb|EIB67078.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1997-14]
gi|380652108|gb|EIB68613.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 110-21]
gi|380653540|gb|EIB69954.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 51037]
gi|380655354|gb|EIB71671.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 87330]
gi|380658368|gb|EIB74389.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 140-16]
gi|380659109|gb|EIB75094.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 87459]
gi|380663681|gb|EIB79310.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1798]
gi|380666668|gb|EIB82199.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1854]
gi|380667573|gb|EIB83003.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1577]
gi|380667753|gb|EIB83164.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1893]
gi|380670809|gb|EIB86054.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 9872]
gi|380672517|gb|EIB87682.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1928]
gi|380676203|gb|EIB91088.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23210]
gi|380677932|gb|EIB92791.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23211]
gi|401780745|emb|CCK66439.1| 50S ribosomal protein L25 [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|407905596|gb|AFU42425.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni PT14]
Length = 178
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE G + + + G + A ++ + L + N + ++ +K
Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFK--------------VNEFIK 47
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
V TT ++ GS + V+ + +D T + ++ A G K
Sbjct: 48 EVR----KKTTLIFDVKVGSQTL------SVVVVDYQKDPVTAELKHVDLKVAQKGVISK 97
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV G + GLK G L + LK C AE++ E+DVS LD+GD + + DI
Sbjct: 98 YMVPVKITG--TAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDI 155
Query: 209 EV 210
V
Sbjct: 156 VV 157
>gi|229915838|ref|YP_002884484.1| 50S ribosomal protein L25/general stress protein Ctc
[Exiguobacterium sp. AT1b]
gi|259646687|sp|C4L193.1|RL25_EXISA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|229467267|gb|ACQ69039.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Exiguobacterium sp. AT1b]
Length = 215
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Query: 134 LNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVD 193
+ + V D+ TE++ D+ +V G+K+GGYL + +I +IE+D
Sbjct: 89 VEFMAVKMDEETEVEADIVLVG----DAKGVKEGGYLAQSLYKVTVAATPANIPERIELD 144
Query: 194 VSNLDIGDRVFMSDIEVHPSWKLLSK 219
VS L IGD V ++D+ S+K++S+
Sbjct: 145 VSELGIGDSVTVADLPEEKSYKIVSE 170
>gi|440732738|ref|ZP_20912543.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
translucens DAR61454]
gi|440367508|gb|ELQ04569.1| 50S ribosomal protein L25/general stress protein Ctc [Xanthomonas
translucens DAR61454]
Length = 215
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 80/188 (42%), Gaps = 29/188 (15%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I+ RE G S R R G IPA+V+ +L P Q+ E +
Sbjct: 5 HEIKVQRREVEGKGASRRLRRDGLIPAIVYGGEL--------KPVNIQLNHNE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ + +F S+ L + D KVL + R IL++ F +D
Sbjct: 51 WLASQNDWFYSSILSLSLNG--------DIQKVLLRDMQRHPFKQLILHIDFQRVNDNEA 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRT----SLKYLCPAEHISPKIEVDVSNLDIGDR 202
L VP+ F ++ P G ++ + T ++ +C + + +EVD+S L +GD
Sbjct: 103 LHASVPLHFLNEDASPA---GKSVEVVVTHELNEIQVVCLPKDLPEFVEVDLSALSVGDV 159
Query: 203 VFMSDIEV 210
+ +SD+++
Sbjct: 160 IHLSDLKL 167
>gi|419659316|ref|ZP_14189852.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 2008-979]
gi|380639740|gb|EIB57215.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 2008-979]
Length = 178
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE G + + + G + A ++ + L + N + ++ +K
Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFK--------------VNEFIK 47
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
V TT ++ GS + V+ + +D T + ++ A G K
Sbjct: 48 EVR----KKTTLIFDVKVGSQTL------SVVVVDYQKDPVTAELKHVDLKVAQKGVISK 97
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV G + GLK G L + LK C AE++ E+DVS LD+GD + + DI
Sbjct: 98 YMVPVKITG--TAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDI 155
Query: 209 EV 210
V
Sbjct: 156 VV 157
>gi|333985476|ref|YP_004514686.1| 50S ribosomal protein L25 [Methylomonas methanica MC09]
gi|333809517|gb|AEG02187.1| 50S ribosomal protein L25 [Methylomonas methanica MC09]
Length = 204
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 77/181 (42%), Gaps = 34/181 (18%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQD------LLDKNTDRRSPSRKQILSTERKQIHSIL 87
R TGS + R +G++PAV++ +LD N +L
Sbjct: 12 RSETGSSAAKVVRRKGKVPAVIYGGSDAPEMLILDHN--------------------DLL 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K + S +++ + +VL + R +IL++ F+ + +L
Sbjct: 52 KHLAHEAVYSHVLDVKVDGRTEKAVLK--------HIQRHPAKPQILHVDFMRVEKDHKL 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KV VP+ F + G+KKGG + ++ C + + IEV+++ ++IG + +SD
Sbjct: 104 KVHVPLHFINEDVSVGVKKGGIVNHTMADVEIACLPKDLPEYIEVNMAAVEIGSALHLSD 163
Query: 208 I 208
+
Sbjct: 164 L 164
>gi|374313560|ref|YP_005059990.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Granulicella
mallensis MP5ACTX8]
gi|358755570|gb|AEU38960.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Granulicella
mallensis MP5ACTX8]
Length = 225
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 89/206 (43%), Gaps = 29/206 (14%)
Query: 22 TTSYYHTIQAIPRECTGSRVSARD-RSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILST 78
+TS + A PR T ++ AR R G IPAVV+ Q+ + D R ++ IL +
Sbjct: 2 STSKIEAVVATPRTGTFNKGHARRVRVSGLIPAVVYGAGQESVAVTVDPRVITK--ILYS 59
Query: 79 ERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVF 138
E +T F L I + V++ + PIK G++L++
Sbjct: 60 ESGH--------------NTIFDLAIEGKGTNKVMIVDWQHEPIK-------GKLLHIDL 98
Query: 139 VWADDGTELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
++V VPV GV G+K GG L + ++ C I I++DV+NL
Sbjct: 99 KRIAMDKAMRVSVPVQLIGVPV--GVKTGGGVLGQVLHEVEVECLPGDIPDHIDIDVANL 156
Query: 198 DIGDRVFMSDIEVHPSWKLLSKNEKM 223
+I + +SD+ K L + + +
Sbjct: 157 EINGAIHISDLPHSDKLKFLGEEDAL 182
>gi|297539288|ref|YP_003675057.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylotenera
versatilis 301]
gi|297258635|gb|ADI30480.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylotenera
versatilis 301]
Length = 202
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 86/207 (41%), Gaps = 25/207 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A+ R+ G+ S R R G +P VV+ + +++ L + H+ +
Sbjct: 5 INAVKRDVKGTGASRRLRRAGTVPGVVYGAG--KEAVTLEINAKELFLEFRHEAFHASVL 62
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
S+ L G +VLL ++ P++ I ++ F ++
Sbjct: 63 SLNLD-------------GKKENVLLRDFQMHPVR-------NTIQHIDFQRVSATEKIH 102
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP F + PG+K GG + I T C A+ + +EVD++ L++G + +S
Sbjct: 103 VKVPFHFINADIAPGVKTGGGIVAHILTEADVSCLAKDLPEFLEVDLAGLEMGHSIHLSQ 162
Query: 208 IEVHPSWKL--LSKNEKMPLCKISATK 232
I++ + L+ + I+ T+
Sbjct: 163 IKLAKGVEFVQLAHGNDAAVAAIAKTR 189
>gi|24216520|ref|NP_714001.1| 50S ribosomal protein L25 [Leptospira interrogans serovar Lai str.
56601]
gi|45656329|ref|YP_000415.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira
interrogans serovar Copenhageni str. Fiocruz L1-130]
gi|386075489|ref|YP_005989809.1| 50S ribosomal protein L25 [Leptospira interrogans serovar Lai str.
IPAV]
gi|417762358|ref|ZP_12410349.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str.
2002000624]
gi|417766217|ref|ZP_12414170.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|417771051|ref|ZP_12418948.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Pomona str. Pomona]
gi|417775880|ref|ZP_12423725.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str.
2002000621]
gi|417785616|ref|ZP_12433319.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str.
C10069]
gi|418668512|ref|ZP_13229914.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|418673198|ref|ZP_13234521.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str.
2002000623]
gi|418683444|ref|ZP_13244648.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|418691546|ref|ZP_13252635.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str.
FPW2026]
gi|418694279|ref|ZP_13255317.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri str. H1]
gi|418699483|ref|ZP_13260442.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Bataviae str. L1111]
gi|418703194|ref|ZP_13264083.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|418709343|ref|ZP_13270134.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|418712489|ref|ZP_13273228.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str. UI
08452]
gi|418723682|ref|ZP_13282518.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str. UI
12621]
gi|418730099|ref|ZP_13288616.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str. UI
12758]
gi|421084397|ref|ZP_15545257.1| ribosomal protein L25, Ctc-form [Leptospira santarosai str.
HAI1594]
gi|421104031|ref|ZP_15564626.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|421117731|ref|ZP_15578088.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|421123293|ref|ZP_15583575.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str. Brem
329]
gi|421124369|ref|ZP_15584626.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|421135148|ref|ZP_15595274.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|71153147|sp|Q72V72.1|RL25_LEPIC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|71153148|sp|Q8EZN1.1|RL25_LEPIN RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|24197831|gb|AAN51019.1| 50S ribosomal protein L25 [Leptospira interrogans serovar Lai str.
56601]
gi|45599563|gb|AAS69052.1| 50S ribosomal protein L25 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|353459281|gb|AER03826.1| 50S ribosomal protein L25 [Leptospira interrogans serovar Lai str.
IPAV]
gi|400324811|gb|EJO77096.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Pomona str. Kennewicki LC82-25]
gi|400351447|gb|EJP03676.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Bulgarica str. Mallika]
gi|400359360|gb|EJP15359.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str.
FPW2026]
gi|409941804|gb|EKN87430.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str.
2002000624]
gi|409946926|gb|EKN96933.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Pomona str. Pomona]
gi|409951262|gb|EKO05778.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str.
C10069]
gi|409957786|gb|EKO16689.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri str. H1]
gi|409962875|gb|EKO26607.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str. UI
12621]
gi|410010703|gb|EKO68837.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Canicola str. Fiocruz LV133]
gi|410020736|gb|EKO87535.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Grippotyphosa str. Andaman]
gi|410344037|gb|EKO95232.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str. Brem
329]
gi|410365483|gb|EKP20876.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410432969|gb|EKP77320.1| ribosomal protein L25, Ctc-form [Leptospira santarosai str.
HAI1594]
gi|410437500|gb|EKP86599.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Grippotyphosa str. 2006006986]
gi|410574375|gb|EKQ37412.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str.
2002000621]
gi|410579827|gb|EKQ47665.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str.
2002000623]
gi|410756021|gb|EKR17649.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Pyrogenes str. 2006006960]
gi|410761489|gb|EKR27668.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Bataviae str. L1111]
gi|410767160|gb|EKR37838.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Hebdomadis str. R499]
gi|410770289|gb|EKR45511.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Grippotyphosa str. UI 08368]
gi|410775113|gb|EKR55112.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str. UI
12758]
gi|410790966|gb|EKR84648.1| ribosomal protein L25, Ctc-form [Leptospira interrogans str. UI
08452]
gi|455667685|gb|EMF32979.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Pomona str. Fox 32256]
gi|455788397|gb|EMF40384.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Lora str. TE 1992]
gi|456824362|gb|EMF72799.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Canicola str. LT1962]
gi|456967834|gb|EMG09146.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Grippotyphosa str. LT2186]
gi|456986397|gb|EMG21975.1| ribosomal protein L25, Ctc-form [Leptospira interrogans serovar
Copenhageni str. LT2050]
Length = 212
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 24/191 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I R TG + R RS G +P + + + + K++ K +HS
Sbjct: 7 HKIAVKKRTTTGKNENNRLRSSGMVPVNIIGGGVATSG----AVNEKEL----EKMVHSG 58
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
++ ST L + G G+ KV ++ R E RI ++ F G +
Sbjct: 59 IRQ-------STLIELDVE-GQGAQ------KVFVKEIQRFPEIDRIRHVDFYKVVPGQK 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ + + G+ G K GG + I ++ E + + +DV++LD+GD + +S
Sbjct: 105 IVTKIGIETTGI--AKGSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSIKIS 162
Query: 207 DIEVHPSWKLL 217
++V SW++L
Sbjct: 163 QLKVPTSWEIL 173
>gi|71730260|gb|EAO32345.1| Ribosomal protein L25 [Xylella fastidiosa Ann-1]
Length = 207
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 91/217 (41%), Gaps = 25/217 (11%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I+A R+ G S R R G IPA+++ + + P Q L+ E+ I
Sbjct: 4 HQIKAQRRKDEGKGASRRLRHAGMIPAIIYGGE--------QRPVSIQ-LNHEQ-----I 49
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ + +F S+ L + VLL + P + ++++ F +
Sbjct: 50 WLAQQNDWFYSSILDLNVDGAGDEKVLLRDLQRHPYR-------QLVMHVDFQRVSSDAK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L V VP+ F + P K GG + + ++ C + + IEVD+S L++G + +
Sbjct: 103 LSVAVPLHFINQATSPADKAGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHL 162
Query: 206 SDIEVHPSWKL---LSKNEKMPLCKISATKLENPEPA 239
SDI + +L L K M + +E+ PA
Sbjct: 163 SDITLPIGVELSTRLDKEHDMAVVIAKHAVIEDDAPA 199
>gi|404451214|ref|ZP_11016185.1| 50S ribosomal protein L25/general stress protein Ctc [Indibacter
alkaliphilus LW1]
gi|403763153|gb|EJZ24134.1| 50S ribosomal protein L25/general stress protein Ctc [Indibacter
alkaliphilus LW1]
Length = 190
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 133 ILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYL--KSIRTSLKYLCPAEHISPKI 190
+L+ F+ D +K ++PV KG + PG+ KGG L K+ R ++K L A ++ KI
Sbjct: 87 LLHADFLAFSDDRPIKFEIPVEIKG--TSPGIIKGGKLEIKTRRLAVKGL--ASNLPDKI 142
Query: 191 EVDVSNLDIGDRVFMSDIEVHPSWKLLSKN 220
EVD+SNLD+G +S+++ L S N
Sbjct: 143 EVDISNLDLGKSFKVSELKAEGFEILTSPN 172
>gi|419640423|ref|ZP_14172357.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23357]
gi|380619484|gb|EIB38543.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni LMG 23357]
Length = 178
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE G + + + G + A ++ + L + N + ++ +K
Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFK--------------VNEFIK 47
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
V TT ++ GS + V+ + +D T + ++ A G K
Sbjct: 48 EVR----KKTTLIFDVKVGSQTL------SVVVVDYQKDPVTAELKHVDLKVAQKGVISK 97
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV G + GLK G L + LK C AE++ E+DVS LD+GD + + DI
Sbjct: 98 YMVPVKITG--TAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDI 155
Query: 209 EV 210
V
Sbjct: 156 VV 157
>gi|428209827|ref|YP_007094180.1| 50S ribosomal protein L25 [Chroococcidiopsis thermalis PCC 7203]
gi|428011748|gb|AFY90311.1| LSU ribosomal protein L25P [Chroococcidiopsis thermalis PCC 7203]
Length = 212
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 3/117 (2%)
Query: 117 GKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKK-GGYLKSIRT 175
GK L +V G I ++ F + V+VP+ F G G+K+ G + ++ T
Sbjct: 72 GKTLVREVQSHPYKGNIYHISFFAVAAQDSVDVEVPLHFVG--DAVGVKQESGIVDTLAT 129
Query: 176 SLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATK 232
SL+ C + I IE+++SNL +GD +++ ++ + +L E+ + +S K
Sbjct: 130 SLQIRCNPDSIPEAIEINISNLHVGDSLYVRELVLPSGVTVLGDTEQAVVTVLSPQK 186
>gi|28572818|ref|NP_789598.1| 50S ribosomal protein L25 [Tropheryma whipplei TW08/27]
gi|71153673|sp|Q83HD6.1|RL25_TROW8 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|28410951|emb|CAD67336.1| 50s ribosomal protein L25 [Tropheryma whipplei TW08/27]
Length = 187
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 90/216 (41%), Gaps = 37/216 (17%)
Query: 26 YHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
Y ++A R G + R R+ G+IPAV + +R+P H
Sbjct: 3 YPVVEAESRVGFGKGFARRARAAGKIPAVAYGL--------KRAPE------------HV 42
Query: 86 ILKSVELPFFCS-TTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRI--LNLVFVWAD 142
+L + ++ LQ++ + S++L +V RD I L+++FV D
Sbjct: 43 LLPAAQMSLIMRRANALLQLKIDARESLVLIK------QVQRDRIRNIIEHLDMLFVNED 96
Query: 143 DGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDR 202
D ++V P+ F G +S G S+ +L+ I + VDVS L G R
Sbjct: 97 DAVTIRV--PLRFVG-QSYAGTVTSVENYSVAVTLQ----VSQIPEALVVDVSGLQAGRR 149
Query: 203 VFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPEP 238
+F SDI + P LL ++ + K+ + EP
Sbjct: 150 IFASDIAL-PDGALLVSPPRLLIAKVDPVRRATQEP 184
>gi|52078547|ref|YP_077338.1| 50S ribosomal protein L25 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319648576|ref|ZP_08002790.1| 50S ribosomal protein L25 [Bacillus sp. BT1B_CT2]
gi|404487417|ref|YP_006711523.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|423680445|ref|ZP_17655284.1| 50S ribosomal protein L25 [Bacillus licheniformis WX-02]
gi|68053089|sp|Q65PG9.1|RL25_BACLD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|52001758|gb|AAU21700.1| general stress protein [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|52346411|gb|AAU39045.1| 50S ribosomal protein L25 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|317389343|gb|EFV70156.1| 50S ribosomal protein L25 [Bacillus sp. BT1B_CT2]
gi|383441551|gb|EID49260.1| 50S ribosomal protein L25 [Bacillus licheniformis WX-02]
Length = 208
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 70/163 (42%), Gaps = 31/163 (19%)
Query: 49 GRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIRAGS 108
G +P V++ ++L +K+ S +IL E K +T L I G
Sbjct: 24 GYVPGVIYGRNLENKSVALDSIELLKILRAEGK---------------NTIINLDIN-GD 67
Query: 109 GSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
SV++ + P+K VH D F D E++ VPV G G+K
Sbjct: 68 QHSVMVTELQTDPLKDSIVHAD----------FKVVDMEAEMEATVPVNLTG--EAEGIK 115
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+GG L+ L ++I IEVD+S+L++ D + + DI
Sbjct: 116 QGGVLQQPLYELSVTAKPKNIPQTIEVDISSLEVNDVLTVGDI 158
>gi|419539843|ref|ZP_14079089.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli Z163]
gi|419576033|ref|ZP_14112703.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1909]
gi|419615629|ref|ZP_14149290.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli Z156]
gi|380518552|gb|EIA44646.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli Z163]
gi|380552066|gb|EIA75635.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli 1909]
gi|380597001|gb|EIB17672.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
coli Z156]
Length = 178
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE G + + + G + A ++ + L + N + ++ +K
Sbjct: 2 LEGIVRESIGRKAAKALKRDGYLIANIYGKGLENINAAFK--------------VNDFIK 47
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
V TT ++ GS + V+ + +D T + ++ A G K
Sbjct: 48 EVR----KKTTLIFDVKVGSQTL------SVVVVDYQKDPVTAELKHVDLKVAQKGVISK 97
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV G + GLK G L + LK C AE++ E+DVS LD+GD + + DI
Sbjct: 98 YMVPVKITG--TAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDI 155
Query: 209 EV 210
V
Sbjct: 156 VV 157
>gi|402548569|ref|ZP_10845422.1| 50S ribosomal protein L25/general stress protein Ctc [SAR86 cluster
bacterium SAR86C]
Length = 165
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 82/174 (47%), Gaps = 26/174 (14%)
Query: 29 IQAIPRECTGSRVSARDRS-QGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A RE TGS + R G IPA+++ + K L+ + K ++ +
Sbjct: 7 LNADSRERTGSNKARVIRKVDGMIPAIIYGDE-------------KDSLNIKLK-LNELT 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K+ + F + L I+ G KV+ ++ +D G+ L+ F+ T+L
Sbjct: 53 KASQNELFYTQV--LIIKNGDLEE------KVVLKELQKDPAKGKFLHADFLRVSRKTKL 104
Query: 148 KVDVPVVFKGVESCPGLKK--GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
KV +P+ F E C G+K G K+IR ++ +C A +I I++DV+ LD+
Sbjct: 105 KVIIPINFLNEEECAGVKNECGVLNKTIR-EVEVMCLAGNIPESIDIDVTALDL 157
>gi|351730209|ref|ZP_08947900.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
radicis N35]
Length = 210
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R+ G+ P +V+ + Q++ + + LK
Sbjct: 5 AFERAKQGTGASRRLRNSGKTPGIVYG-----------GTTEPQLIEVDHNALWHALKK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F S+ +++ AG+ + VLL + P K +L++ F D+ T+L +
Sbjct: 53 --EAFHSSVLDMEV-AGTTAKVLLRDVQYHPYK-------QLVLHIDFQRVDEKTKLHMK 102
Query: 151 VPVVFKGVESCPGLKKGG-YLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F G E P +K + I L C + I VD+S L+ G + + I+
Sbjct: 103 VPLHFSGAEESPAVKVDKCMVNPIVNELDVTCMPSDLPEFIAVDLSTLEKGSSLHLKSIK 162
Query: 210 V 210
+
Sbjct: 163 L 163
>gi|399911606|ref|ZP_10779920.1| 50S ribosomal protein L25 [Halomonas sp. KM-1]
Length = 212
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 84/187 (44%), Gaps = 28/187 (14%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R+ +PA+V+ D ++P Q +S E+ +
Sbjct: 5 TLNASVRNDLGKGASRRLRRANLEVPAIVYGGD--------KAP---QPISLEKAPFY-- 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDG 144
K++E F S+ L I V+ D + P+ H D F+ D
Sbjct: 52 -KAIEDETFFSSVLNLVIDGKKEQVVVRDLQRHPYKPLVTHAD----------FMRVDAT 100
Query: 145 TELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ ++VP+ G E G+K +GG L + ++ C + + +EVD++N+++G +
Sbjct: 101 HAITINVPLHVVGEEKSKGIKDQGGELHILSNEIQISCLPKDLPDFLEVDITNVELGTTL 160
Query: 204 FMSDIEV 210
+SD+E+
Sbjct: 161 HLSDLEL 167
>gi|58039600|ref|YP_191564.1| 50S ribosomal protein L25 [Gluconobacter oxydans 621H]
gi|68053025|sp|Q5FRT8.1|RL25_GLUOX RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|58002014|gb|AAW60908.1| LSU ribosomal protein L25P [Gluconobacter oxydans 621H]
Length = 218
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R +G +PAV++ ++ PS I++ + + I+K + + S + L
Sbjct: 24 RREGLVPAVIYG--------GKQEPS---IIALDPR---VIMKELHRGGWSSRVYNLAAE 69
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
+ L+ ++ P+ T +++ F GT++ V+V + F G E PG+K
Sbjct: 70 GAEPVAALIRDVQLHPV-------TDAPIHVDFQRVAAGTKVHVEVSIAFVGEEKSPGIK 122
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
+GG L +R + +I ++S LDI D V +D++
Sbjct: 123 RGGVLNVVRHYVDVQADPANIPEHFTAELSGLDIHDNVRWTDLK 166
>gi|419634776|ref|ZP_14167102.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 55037]
gi|419683229|ref|ZP_14211936.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1213]
gi|380613983|gb|EIB33436.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 55037]
gi|380659656|gb|EIB75627.1| 50S ribosomal protein L25/general stress protein Ctc [Campylobacter
jejuni subsp. jejuni 1213]
Length = 178
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 76/182 (41%), Gaps = 26/182 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE G + + + G + A ++ + L + N + ++ +K
Sbjct: 2 LEGIIRESIGRKAAKALKRDGYLIANIYGKGLENINAAFK--------------VNEFIK 47
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
V TT ++ GS + V+ + +D T + ++ A G K
Sbjct: 48 EVR----KKTTLIFDVKVGSQTL------SVVVVDYQKDPVTAELKHVDLKVAQKGVISK 97
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV G + GLK G L + LK C AE++ E+DVS LD+GD + + DI
Sbjct: 98 YMVPVKITG--TAIGLKNKGVLIQSKRRLKVKCAAENLPNFFELDVSKLDVGDALLVRDI 155
Query: 209 EV 210
V
Sbjct: 156 VV 157
>gi|399154425|ref|ZP_10754492.1| 50S ribosomal protein L25/general stress protein Ctc [gamma
proteobacterium SCGC AAA007-O20]
Length = 239
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 76/181 (41%), Gaps = 22/181 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A+ RE G S R R + ++P++V+ + ++P + IH I
Sbjct: 4 TVNALVREDQGKGASRRLRKEEKVPSIVYGGN--------KAPLMISL------NIHEIT 49
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+E ++ L + V+ D + R I ++ F+ D+ L
Sbjct: 50 HLLEDEDTFTSVLDLVVDKSKEPVVIKD--------IQRHPAKNSIFHVDFLRIDEKHAL 101
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
P+ F G E ++ G L +++ C + + I+VDVS L++GD + ++D
Sbjct: 102 ITTTPLHFIGTEDNEAIRIGNMLNQFVVAIEISCLPKDLPHGIDVDVSGLELGDHLTLTD 161
Query: 208 I 208
+
Sbjct: 162 L 162
>gi|429335290|ref|ZP_19215927.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida CSV86]
gi|428760092|gb|EKX82369.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida CSV86]
Length = 197
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 78/180 (43%), Gaps = 24/180 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G S R R IPAVV+ N D S + IL+ E I K
Sbjct: 6 LNAQARTDLGKGASRRLRHAASIPAVVYG-----GNKDAESVT---ILAKE------IAK 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
E S L + G +V++ + + P K + I++ FV G +L
Sbjct: 52 LFENEAAFSHVIELNVD-GKKQNVIVKAMQRHPAKQY-------IMHADFVRVVAGQKLT 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV F E P +KKGG + ++ C A+ + IEVD++N +IG V +SD+
Sbjct: 104 AVVPVHFIN-EEAP-VKKGGEISHTLNEIEVSCEAKDLPEFIEVDLANAEIGTIVHLSDL 161
>gi|340785804|ref|YP_004751269.1| 50S ribosomal protein L25 [Collimonas fungivorans Ter331]
gi|340551071|gb|AEK60446.1| LSU ribosomal protein L25p [Collimonas fungivorans Ter331]
Length = 208
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 23/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R+ G+ S R R+ G+ P +V+ N +S + ++ LK
Sbjct: 5 AFVRKEQGTGASRRLRNAGQTPGIVYGGSDAPVN-----------ISLDHNALYHALKK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F S+ L+I G+ VLL +VH ++ +L+ F D + V
Sbjct: 53 --ETFHSSILDLEID-GAVQKVLLRD-----FQVHAYKQL--VLHADFQRVDAKQAIHVK 102
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F E P +K G + + T L+ C + IEVD++N+++G + ++D++
Sbjct: 103 VPLHFVNAEIAPAVKLSGAIISHVFTELEVTCLPADLPEFIEVDLTNIEVGHSIHLADLK 162
Query: 210 V 210
+
Sbjct: 163 L 163
>gi|337280989|ref|YP_004620461.1| 50S ribosomal protein L25 [Ramlibacter tataouinensis TTB310]
gi|334732066|gb|AEG94442.1| 50S ribosomal protein L25-like protein [Ramlibacter tataouinensis
TTB310]
Length = 235
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R+ G+ P +V+ + + Q++ + + LK
Sbjct: 5 AFERAKQGTGASRRLRNTGKTPGIVYGGE-----------GQPQLIELDHNALWHALKR- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F ST +++ AG S VLL ++ P K + ++ F D T+L +
Sbjct: 53 --EAFHSTILEMEV-AGKTSKVLLRDVQMHPFK-------QLVQHIDFQRVDARTKLHMK 102
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ +K E +K + + + + L C + IEVD+S L G + ++DI+
Sbjct: 103 VPLHYKNAEESQAVKFEHCVVNHVMSELNISCLPGDLPEFIEVDLSGLKKGTSLHLNDIQ 162
Query: 210 VHPSWKLLSKNEKMP-LCKISATKLE 234
+ ++ +K P L + AT E
Sbjct: 163 LPKGVNAVTGGKKNPVLVSVVATVAE 188
>gi|332711867|ref|ZP_08431797.1| LSU ribosomal protein L25P [Moorea producens 3L]
gi|332349195|gb|EGJ28805.1| LSU ribosomal protein L25P [Moorea producens 3L]
Length = 183
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KV+V V K V G+K+GG L+ T++K CP + I I++D+SNL+ G +++ +
Sbjct: 101 KVEVVVPLKLVGEAVGVKQGGILQQRLTTVKVQCPPDKIPETIDIDISNLEQGKMLYIYE 160
Query: 208 I 208
+
Sbjct: 161 L 161
>gi|421880160|ref|ZP_16311558.1| LSU ribosomal protein L25p [Helicobacter bizzozeronii CCUG 35545]
gi|375317627|emb|CCF79554.1| LSU ribosomal protein L25p [Helicobacter bizzozeronii CCUG 35545]
Length = 151
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 55/116 (47%), Gaps = 18/116 (15%)
Query: 126 RDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEH 185
+D T ++++ + G + K +PV G+ GLK G L + ++ C EH
Sbjct: 48 KDPVTNALVHVDLLVLQKGVKTKFHIPVKVHGIPV--GLKNKGILMISKERVQVECVPEH 105
Query: 186 ISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPEPAVM 241
+ EVDV++LD+GD + + D+++ P+ A LENP AV+
Sbjct: 106 LFSSFEVDVAHLDVGDAILVRDLKI-PT---------------QAHILENPNNAVV 145
>gi|257094305|ref|YP_003167946.1| 50S ribosomal protein L25/general stress protein Ctc [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257046829|gb|ACV36017.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 203
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 85/205 (41%), Gaps = 35/205 (17%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQD----LLDKNTDRRSPSRKQILSTERKQIH 84
+ A R GS S R R + R+PA+V+ L+D + +IL RK+
Sbjct: 5 LHARKRTLQGSGASRRLRREKRVPAIVYGGSAAPLLIDLD-------HNEILLNLRKEA- 56
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKV--LPIKVHRDEETGRILNLVFVWAD 142
F ++ L + + S VL DS + P+ +H D F D
Sbjct: 57 ----------FHASVLTLNVDGATQSVVLRDSQRHPWKPLVLHCD----------FQRVD 96
Query: 143 DGTELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
+ VP+ F + PG+K GG + I ++ C + + IEVD+ NL+ G
Sbjct: 97 TTHAIHQRVPLHFVNADIAPGVKIGGGNVAHILNDIEVTCLPQDLPAYIEVDLKNLESGH 156
Query: 202 RVFMSDIEVHPSWKLLSKNEKMPLC 226
+ +S++ K ++ ++ P+
Sbjct: 157 ALHVSELVFPAGVKPVTHGDEDPVV 181
>gi|417780924|ref|ZP_12428680.1| ribosomal protein L25, Ctc-form [Leptospira weilii str. 2006001853]
gi|410778895|gb|EKR63517.1| ribosomal protein L25, Ctc-form [Leptospira weilii str. 2006001853]
Length = 212
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 24/191 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I R TG + R RS G IP + + + + K++ K +HS
Sbjct: 7 HKIAVKKRTETGKNENNRLRSSGMIPVNIIGAGVATSG----AVNEKEL----EKMVHSG 58
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
++ ST L + G G KV ++ R E RI ++ F G +
Sbjct: 59 IRQ-------STLIELDVE-GQGQQ------KVFVKEIQRFPEIDRIRHVDFYKVVPGKK 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ + + GV G K GG + I ++ E + + +DV++LD+GD + +S
Sbjct: 105 IITKIGIETTGV--AKGSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSIKIS 162
Query: 207 DIEVHPSWKLL 217
++V SW++L
Sbjct: 163 QLKVPASWEIL 173
>gi|398850715|ref|ZP_10607413.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM80]
gi|398248176|gb|EJN33600.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM80]
Length = 199
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ + ++P +L+ E +
Sbjct: 5 TLNAELRSDLGKGASRRLRRLAALVPAVVYGGE--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + R G +L+ FV G +
Sbjct: 51 AKLLENDAAYSHVIELNV-GGKKQNVIIKA-------LQRHPSKGHVLHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E P KKGG + + ++ C + + IEVD+S L+IG V +S
Sbjct: 103 LTAIVPVHFVG-EEAP-TKKGGEISHVLNEIEVTCLPKDLPEFIEVDLSALEIGAIVHLS 160
Query: 207 DIE 209
D++
Sbjct: 161 DLK 163
>gi|114331139|ref|YP_747361.1| 50S ribosomal protein L25/general stress protein Ctc [Nitrosomonas
eutropha C91]
gi|122313984|sp|Q0AGY6.1|RL25_NITEC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|114308153|gb|ABI59396.1| LSU ribosomal protein L25P [Nitrosomonas eutropha C91]
Length = 202
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 79/183 (43%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A R G+ + R R QGR+P V++ Q + + K ++ LK
Sbjct: 5 ISANSRNLHGTGANRRLRIQGRLPGVIYG-----------GGGTAQPIDLDHKDLYYKLK 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F ++ + + G VLL ++ P K ++L++ F ++
Sbjct: 54 T---DVFHASILSINVD-GKKEQVLLRDVQMHPFKQ-------QVLHIDFQRIRQDQKIH 102
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V VP+ F + PG+K GG + + T ++ C + + I VD+S + G + SD
Sbjct: 103 VKVPLHFINADIAPGVKLSGGMISHVATEIEISCLPKDLPESITVDLSEMTAGSILHTSD 162
Query: 208 IEV 210
+++
Sbjct: 163 LKL 165
>gi|338214175|ref|YP_004658232.1| 50S ribosomal protein L25 [Runella slithyformis DSM 19594]
gi|336307998|gb|AEI51100.1| 50S ribosomal protein L25 [Runella slithyformis DSM 19594]
Length = 187
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Query: 133 ILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEV 192
IL+ F+ DD E+K++VPV F G + G+ KGG L +K + A++I ++V
Sbjct: 85 ILHADFLAVDDEKEIKIEVPVRFTG--TAVGVTKGGKLVQKLRKIKVVGLAKNIPDFVDV 142
Query: 193 DVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKIS 229
V +LD+G V + ++V +K+++ N +P+ +
Sbjct: 143 PVGDLDLGKSVKVGQLKVE-GFKIVN-NASLPIAGVE 177
>gi|408483927|ref|ZP_11190146.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
sp. R81]
Length = 198
Score = 45.4 bits (106), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 78/182 (42%), Gaps = 24/182 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R G S R R IPAVV+ + ++ + ++ E H I
Sbjct: 5 TLNAQARTDLGKGASRRLRHAANIPAVVYGGNKPAESVTILAKEIAKLFENEAAYSHVIE 64
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+V+ G+ +V++ + + R I++ FV G +L
Sbjct: 65 LNVD---------------GAKQNVIVKA-------MQRHPSKQFIMHADFVRVVAGQKL 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
VPV F G E P +KKGG + + ++ C + + IEVD+S L++G V +SD
Sbjct: 103 TAIVPVHFVG-EEAP-VKKGGEISHVLNEIEVTCLPKDLPEFIEVDLSALEVGAIVHLSD 160
Query: 208 IE 209
++
Sbjct: 161 LK 162
>gi|89900451|ref|YP_522922.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Rhodoferax
ferrireducens T118]
gi|109893386|sp|Q21XW2.1|RL25_RHOFD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|89345188|gb|ABD69391.1| LSU ribosomal protein L25P [Rhodoferax ferrireducens T118]
Length = 223
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 82/196 (41%), Gaps = 23/196 (11%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R GR P +V+ +QI H++ K
Sbjct: 5 AFERAKQGTGASRRLRITGRTPGIVYGG----------GAEPQQIEIDHNALWHALKKEA 54
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F + +++ G + VLL ++ P K IL++ F D T L +
Sbjct: 55 ----FHAAVLDMELD-GKDNKVLLRDVQMHPFK-------QLILHVDFQRVDASTRLHMK 102
Query: 151 VPVVFKGVESCPGLKKGGYLKS-IRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ + G E+ P +K G + + + T ++ LC + I VD+S L G + ++D+
Sbjct: 103 VPLHYSGDENSPAVKTEGCIANHVITEIEVLCLPTDLPEFIAVDLSGLKKGASLHLADVA 162
Query: 210 VHPSWKLLSKNEKMPL 225
+ +++ K P+
Sbjct: 163 LPKGVTAVTRGNKNPV 178
>gi|421617607|ref|ZP_16058594.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri KOS6]
gi|409780387|gb|EKN60018.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri KOS6]
Length = 205
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 94/210 (44%), Gaps = 26/210 (12%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R+ +PAV++ D ++P IL+ + +
Sbjct: 5 TLNAQVRSDLGKGASRRLRRNASLVPAVIYGGD--------KAPQSISILAKD------L 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G SVL+ + + P K +L+ FV G +
Sbjct: 51 AKLLENEASFSHVLNLNVD-GQNESVLIKALQRHPAK-------SFVLHADFVRVVAGHK 102
Query: 147 LKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L VP+ F ES G+K+ GG + ++ C + + IEVD++N+++G + M
Sbjct: 103 LTATVPLHFINQESSVGVKQQGGEILHNLNEVEVSCLPQDLPEFIEVDMANVEVGQVLHM 162
Query: 206 SDIEVHPSWKL--LSKNEKMPLCKISATKL 233
+D+++ +L L+ +P+ + A ++
Sbjct: 163 TDLKLPKGVELVALAHGSDLPVANVHAPRV 192
>gi|256389402|ref|YP_003110966.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Catenulispora
acidiphila DSM 44928]
gi|256355628|gb|ACU69125.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Catenulispora
acidiphila DSM 44928]
Length = 207
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 88/211 (41%), Gaps = 30/211 (14%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A R G + R R+ ++PAVV+ P R +L H ++
Sbjct: 6 ISAEDRTEFGKGFARRARAVNKVPAVVYGHG---------EPVRHILLPG-----HDLMI 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++ P L + G G + L VLP V +D + ++ V G ++
Sbjct: 52 ALRTPNVL-----LNLEFGDGKAQL-----VLPKDVQKDPVKRTLEHVDLVLVRSGEKVT 101
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VD+P+ G + G L +L A HI IEVDV + G ++F+ D+
Sbjct: 102 VDIPITVTGE-----VVGGAVLDHSLNNLTVTAEATHIPTGIEVDVDRKEEGFQLFVRDL 156
Query: 209 EVHPSWKLLSKNEKMPLCKISATKLENPEPA 239
E+ +L++ +++ L ++ T+ E E A
Sbjct: 157 ELPAGSELVTDGDQLVL-QVVVTRAEVSEEA 186
>gi|168181809|ref|ZP_02616473.1| 50S ribosomal protein L25 [Clostridium botulinum Bf]
gi|237796572|ref|YP_002864124.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
botulinum Ba4 str. 657]
gi|182675191|gb|EDT87152.1| 50S ribosomal protein L25 [Clostridium botulinum Bf]
gi|229262239|gb|ACQ53272.1| 50S ribosomal protein L25 [Clostridium botulinum Ba4 str. 657]
Length = 178
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 33/180 (18%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R C S RD G++P +++ ++L + ++++++ V
Sbjct: 9 RNCKNSNKVRRD---GKVPGIIYGKNL-----------SNLMFEVGEIELNNMISQVGEH 54
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVD 150
+ G+ VL+ + P+K +H D E + + +
Sbjct: 55 GVTDINY-----EGTDYKVLIKEVQKDPVKKNVIHIDLEN---------VTNSSNLINAE 100
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+P++F G E +KKGG ++ + S+K CP E + I +D+S DIG +SD+E+
Sbjct: 101 IPILFSGDELI--MKKGGVVQKEKNSVKVRCPEEKLPNNIMIDLSQYDIGKTFRISDLEL 158
>gi|254439461|ref|ZP_05052955.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 307]
gi|198254907|gb|EDY79221.1| ribosomal protein L25, Ctc-form [Octadecabacter antarcticus 307]
Length = 215
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 81/188 (43%), Gaps = 25/188 (13%)
Query: 30 QAIPRECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+A R TG + + R G +P VV+ +D + N + +L
Sbjct: 9 EATLRTDTGKGAARQARRDGLVPGVVYGGGEDPIAINV----------------PFNVLL 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K ++ F ST F L++ D +V+ V R +L F+ T++
Sbjct: 53 KRLQAGRFLSTLFNLKVEGH-------DDVRVICRNVQRHIVKDLPTHLDFMRLKRTTKI 105
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ + V F + CP LK+GG L +R ++ + A I + VD++ L++G+ + +S
Sbjct: 106 NLFIGVEFINEDECPALKEGGVLIPVRNEVELIVTAGDIPEILTVDLTGLELGETITISS 165
Query: 208 IEVHPSWK 215
I++ K
Sbjct: 166 IKLPAGAK 173
>gi|148546001|ref|YP_001266103.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida F1]
gi|386010381|ref|YP_005928658.1| 50S ribosomal protein L25 [Pseudomonas putida BIRD-1]
gi|395447142|ref|YP_006387395.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida ND6]
gi|397698431|ref|YP_006536314.1| 50S ribosomal protein L25 [Pseudomonas putida DOT-T1E]
gi|421524624|ref|ZP_15971245.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida LS46]
gi|166223707|sp|A5VYF9.1|RL25_PSEP1 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|148510059|gb|ABQ76919.1| LSU ribosomal protein L25P [Pseudomonas putida F1]
gi|313497087|gb|ADR58453.1| 50S ribosomal protein L25 [Pseudomonas putida BIRD-1]
gi|388561139|gb|AFK70280.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida ND6]
gi|397335161|gb|AFO51520.1| 50S ribosomal protein L25 [Pseudomonas putida DOT-T1E]
gi|402751087|gb|EJX11600.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
putida LS46]
Length = 197
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 24/180 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G S R R IPAVV+ D Q L+ K+I + +
Sbjct: 6 LNAQARTDLGKGASRRLRHSLSIPAVVYGGD-----------KEAQSLTILAKEITKLFE 54
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ E F S L + G +V++ + + P K I++ FV G +L
Sbjct: 55 N-EAAF--SHVIELNVD-GVKQNVIIKAMQRHPAKQF-------IMHADFVRVVAGQKLT 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VPV F E P +KKGG + + + ++ C A+ + IEVD+ N +IG + +SD+
Sbjct: 104 AKVPVHFIN-EEAP-VKKGGEISHVESEIEVSCEAKDLPEFIEVDLGNAEIGTIIHLSDL 161
>gi|333384107|ref|ZP_08475750.1| 50S ribosomal protein L25 [Dysgonomonas gadei ATCC BAA-286]
gi|332826853|gb|EGJ99653.1| 50S ribosomal protein L25 [Dysgonomonas gadei ATCC BAA-286]
Length = 193
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 32/202 (15%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R G + + R + +IPAV++ + DK IH I+ + E+
Sbjct: 11 RTDLGKKATKAFRKEDKIPAVIYGGEKADK------------------AIHFIVTNSEVR 52
Query: 94 --FFCSTTFPLQIRAGSGS-SVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
+ F + + G + +L +V P+ T IL+L F+ + + +D
Sbjct: 53 KLIYTPEIFLVDLTVGKDNYKAILKDIQVHPV-------TDEILHLDFLHVFENKPITID 105
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
VPVV G+ G+K GG L LK + + K+ VDVS L +G + + ++
Sbjct: 106 VPVVLDGL--AEGVKAGGKLSLDLRKLKVRALYDKVPEKVHVDVSGLALGKSIQVGELHF 163
Query: 211 HPSWKLLSKNEKMPLCKISATK 232
L +KN +C++ T+
Sbjct: 164 EGLELLNAKNG--VVCRVQLTR 183
>gi|396078355|dbj|BAM31731.1| 50S ribosomal protein L25 [Helicobacter cinaedi ATCC BAA-847]
Length = 178
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 51/97 (52%), Gaps = 9/97 (9%)
Query: 117 GKVLPIKVH---RDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGG--YLK 171
GK L + V +D T I+++ + A G K VPV KG S GLK G ++
Sbjct: 63 GKTLDVVVQEYQKDPVTNTIIHVDLLLAQKGVVSKYKVPVSVKG--SAKGLKNKGVLFIS 120
Query: 172 SIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ R S+K C AE + E+DVS+L +GD + + D+
Sbjct: 121 TKRISVK--CTAEKLPNTYELDVSDLYVGDSILIRDL 155
>gi|222152154|ref|YP_002561314.1| 50S ribosomal protein L25/general stress protein Ctc [Macrococcus
caseolyticus JCSC5402]
gi|222121283|dbj|BAH18618.1| 50S ribosomal protein L25 [Macrococcus caseolyticus JCSC5402]
Length = 216
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 77/178 (43%), Gaps = 27/178 (15%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPS-RKQILSTERKQIHSILKSVELPFFCSTTFPLQI 104
R++G+IPAVV+ + + P K I R + I
Sbjct: 22 RNEGKIPAVVYGYGASNTSVKVDEPEFVKVIREVGRNGV--------------------I 61
Query: 105 RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGL 164
G GS + KV+ D ++ ++ F+ + +EL VDV V G G+
Sbjct: 62 ELGVGSKAI----KVMVSDYQIDPLKNKVTHIDFLAINMKSELTVDVVVNLTG--EAQGV 115
Query: 165 KKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEK 222
K+GG ++ L + I IEVDV+ L+IGD + + D++ ++ + +++++
Sbjct: 116 KEGGVVQQPLFQLSVTATPDEIPETIEVDVTELNIGDSIMVGDLKADKAYTINNEDDE 173
>gi|153003001|ref|YP_001377326.1| 50S ribosomal protein L25/general stress protein Ctc
[Anaeromyxobacter sp. Fw109-5]
gi|166223660|sp|A7H6J6.1|RL25_ANADF RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|152026574|gb|ABS24342.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Anaeromyxobacter sp. Fw109-5]
Length = 235
Score = 45.1 bits (105), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 80/182 (43%), Gaps = 24/182 (13%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ I A RE G + R R +G IPAVV+ + ++ P+ LS + S+
Sbjct: 4 NIINAQRREEKGKGPARRLRQKGLIPAVVYGR--------KQEPTH---LSVDPA---SL 49
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
LK++E P +T L++ G+ VL V P V R E L + A
Sbjct: 50 LKAIETPHKFNTLLTLKLD-GAEKHVLFKDWAVDP--VSRKLEHADFLEVKLDEA----- 101
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+KV VPVV G G +GG L + I +IEVDV+NL IG + +S
Sbjct: 102 VKVAVPVVTSG--RSVGQAEGGILSLATHEVVLEALPSKIPVRIEVDVTNLKIGQSIHVS 159
Query: 207 DI 208
+
Sbjct: 160 QL 161
>gi|332798112|ref|YP_004459611.1| 50S ribosomal protein L25 [Tepidanaerobacter acetatoxydans Re1]
gi|438001015|ref|YP_007270758.1| LSU ribosomal protein L25p [Tepidanaerobacter acetatoxydans Re1]
gi|332695847|gb|AEE90304.1| 50S ribosomal protein L25 [Tepidanaerobacter acetatoxydans Re1]
gi|432177809|emb|CCP24782.1| LSU ribosomal protein L25p [Tepidanaerobacter acetatoxydans Re1]
Length = 210
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 81/171 (47%), Gaps = 37/171 (21%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
+ +G++PAVV+ K + S +S + K++ ILKS
Sbjct: 22 KREGKVPAVVYG-----KGYETTS------ISVDDKELSRILKS---------------- 54
Query: 106 AGSGSSVLLD---SGKVLPI---KVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVE 159
G S L++ +G+ P+ +V R+ + ++ F E++ ++P+V KG
Sbjct: 55 --RGESSLINLELNGEAFPVLIKEVQRNVLKNSMEHVDFFKVSMDEEVEYNLPIVLKG-- 110
Query: 160 SCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
G+K+GG L+ + + + IE+D+S++DIGD + ++D+++
Sbjct: 111 DAKGVKEGGVLQHQKREVAVKSLPNDMLDNIEIDISDMDIGDTLTVADLKI 161
>gi|77164043|ref|YP_342568.1| 50S ribosomal protein L25 [Nitrosococcus oceani ATCC 19707]
gi|254435005|ref|ZP_05048512.1| ribosomal protein L25, Ctc-form [Nitrosococcus oceani AFC27]
gi|109893372|sp|Q3JDQ8.1|RL25_NITOC RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|76882357|gb|ABA57038.1| LSU ribosomal protein L25P [Nitrosococcus oceani ATCC 19707]
gi|207088116|gb|EDZ65388.1| ribosomal protein L25, Ctc-form [Nitrosococcus oceani AFC27]
Length = 214
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKI 190
++L+L +L + VP+ F G E PG+K+ GG + + ++ C A+ + I
Sbjct: 89 KVLHLDLQRVSSTQKLTIKVPLHFIGDEMAPGVKQEGGTVARLLNDIEISCLAKDLPEYI 148
Query: 191 EVDVSNLDIGDRVFMSDIEV 210
EVD+++L +G+ V +SD+++
Sbjct: 149 EVDLADLGVGETVHLSDLKL 168
>gi|389775873|ref|ZP_10193719.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
spathiphylli B39]
gi|388436936|gb|EIL93766.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
spathiphylli B39]
Length = 231
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 82/185 (44%), Gaps = 23/185 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I+A R+ G S R R +PAVV+ + P QI + ++I
Sbjct: 5 HEIKAQSRKDEGKGASRRLRHAAFVPAVVYGAG--------QPPESIQI------EHNTI 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
L + + +F S+ L + G VL+ + P K ++++ F+ D+ +
Sbjct: 51 LLAAKNEWFFSSVLDLNVD-GKVQKVLVRDWQKHPFK-------QLMMHMDFLRIDENAK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L+ +VP+ F E P K G + S T ++ C + + IE+D+ L GD + +
Sbjct: 103 LRANVPLHFLNQEKSPAGKTSGVVISHNLTEVEVSCLPKDLPAYIELDLGELVAGDIIHL 162
Query: 206 SDIEV 210
S +++
Sbjct: 163 SQLKL 167
>gi|289547989|ref|YP_003472977.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermocrinis
albus DSM 14484]
gi|289181606|gb|ADC88850.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Thermocrinis
albus DSM 14484]
Length = 193
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
EL+++VPV F G + GL GG +++ T+L P + I KI VDVS+L +GD + +
Sbjct: 98 ELELEVPVEFVGTPAGVGL--GGTFEAVLTTLTVKAPIDRIPDKIVVDVSSLGLGDALHV 155
Query: 206 SDIE 209
DI+
Sbjct: 156 RDIQ 159
>gi|410450251|ref|ZP_11304293.1| ribosomal protein L25, Ctc-form [Leptospira sp. Fiocruz LV3954]
gi|418746918|ref|ZP_13303231.1| ribosomal protein L25, Ctc-form [Leptospira santarosai str. CBC379]
gi|418754799|ref|ZP_13311021.1| ribosomal protein L25, Ctc-form [Leptospira santarosai str. MOR084]
gi|421112303|ref|ZP_15572761.1| ribosomal protein L25, Ctc-form [Leptospira santarosai str. JET]
gi|422005804|ref|ZP_16352969.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira
santarosai serovar Shermani str. LT 821]
gi|409964900|gb|EKO32775.1| ribosomal protein L25, Ctc-form [Leptospira santarosai str. MOR084]
gi|410016010|gb|EKO78100.1| ribosomal protein L25, Ctc-form [Leptospira sp. Fiocruz LV3954]
gi|410792150|gb|EKR90092.1| ribosomal protein L25, Ctc-form [Leptospira santarosai str. CBC379]
gi|410802358|gb|EKS08518.1| ribosomal protein L25, Ctc-form [Leptospira santarosai str. JET]
gi|417255522|gb|EKT84994.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira
santarosai serovar Shermani str. LT 821]
gi|456876592|gb|EMF91678.1| ribosomal protein L25, Ctc-form [Leptospira santarosai str. ST188]
Length = 211
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 84/196 (42%), Gaps = 24/196 (12%)
Query: 22 TTSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERK 81
+ S H I R TG + R RS G IP V + + + K++ K
Sbjct: 2 SQSTIHKIAVKKRTETGKNENNRLRSSGMIPVNVIGGGVATSG----AVNEKEL----EK 53
Query: 82 QIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWA 141
+HS ++ S+ L + G G+ KV ++ R E RI ++ F
Sbjct: 54 MVHSGIRQ-------SSLIELDVE-GQGAQ------KVFVKEIQRFPEIDRIRHVDFYKV 99
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
G ++ + + G+ G K GG + I ++ E + + +DV++LD+GD
Sbjct: 100 VPGKKIITKIGIETTGI--AKGSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGD 157
Query: 202 RVFMSDIEVHPSWKLL 217
+ +S ++V SW++L
Sbjct: 158 SIKISQLKVPASWEIL 173
>gi|452077539|gb|AGF93495.1| ribosomal protein L25 [uncultured organism]
Length = 230
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 32/195 (16%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++ RE TG VS R R G+IP +V+ K I ST I
Sbjct: 4 YELEVETREGTGKGVSRRLRRNGKIPGIVYG---------------KSIDST-----PLI 43
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK-VHRDEETGRILNLVF--VWADD 143
+ EL + + ++ D +V+ IK RD I+++ F ++ D+
Sbjct: 44 VDPTELYDKLNKNAIIDLKITDE-----DEEEVVMIKDYQRDVIKDNIIHVDFQQIFMDE 98
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
E+ V VP+ G G+++GG L+ + ++ E I ++++D+S L++GD +
Sbjct: 99 --EISVTVPINIVG--DAIGVQEGGVLQELMREVEIEALPEDIPRELDLDISELEVGDSL 154
Query: 204 FMSDIEVHPSWKLLS 218
+SDIE K+ S
Sbjct: 155 QVSDIEAPEDIKITS 169
>gi|390953781|ref|YP_006417539.1| 50S ribosomal protein L25 [Aequorivita sublithincola DSM 14238]
gi|390419767|gb|AFL80524.1| LSU ribosomal protein L25P [Aequorivita sublithincola DSM 14238]
Length = 216
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 90/205 (43%), Gaps = 29/205 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI+ RE G + + R+ G +P VV+ K+ +S ++I +
Sbjct: 5 TIKGSQRESVGKKATKALRNAGMVPCVVYGG--------------KEPISFSAEEI-AFK 49
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
V P + L GS +L + P+ T RIL++ F D E+
Sbjct: 50 NLVYTPDVHTVVVDL---GGSKVQAILQDIQFHPV-------TDRILHIDFYQIFDDKEV 99
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+++PV G + G++ GG L+ + L+ E++ IE D++ + IG +++
Sbjct: 100 MMEIPVRTTG--NARGVRNGGTLRIVTRKLRVKALPENLPDFIEADITEMKIGAKMYTKS 157
Query: 208 IEVHPSWKLLSKNEKMPLCKISATK 232
IE ++K++ E +C++ ++
Sbjct: 158 IETD-NFKIMHP-ENTVICQVRTSR 180
>gi|402702457|ref|ZP_10850436.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
fragi A22]
Length = 196
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 2/85 (2%)
Query: 124 VHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPA 183
+ R G +++ FV G +L VPV F G E+ P +KKGG + + ++ C
Sbjct: 80 LQRHPAKGHVMHADFVRVIAGQKLTAIVPVHFIG-EAAP-IKKGGEISHVVAEIEVSCLP 137
Query: 184 EHISPKIEVDVSNLDIGDRVFMSDI 208
+ + IEVD++N ++G + +SDI
Sbjct: 138 KDLPEFIEVDLANAEVGSIIHLSDI 162
>gi|218441640|ref|YP_002379969.1| 50S ribosomal protein L25/general stress protein Ctc [Cyanothece
sp. PCC 7424]
gi|226736304|sp|B7KCY0.1|RL25_CYAP7 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|218174368|gb|ACK73101.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Cyanothece
sp. PCC 7424]
Length = 198
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%)
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
K+DV V V G+K+GG ++ + T + C E I IE+D+S L IGD + + D
Sbjct: 101 KIDVVVPLNLVGESSGVKQGGIIEQVITEISVQCLPESIPETIEIDISPLKIGDSISVGD 160
Query: 208 IEV 210
+++
Sbjct: 161 LQL 163
>gi|416014617|ref|ZP_11562367.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. glycinea str. B076]
gi|320325684|gb|EFW81745.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
syringae pv. glycinea str. B076]
Length = 203
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEQRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + P K G +++ FV G +
Sbjct: 51 AKLLENDAAYSHIIELNV-GGQKQNVIIKALQRHPAK-------GHVMHADFVRVIAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VP+ F E P +KKGG + T L+ C + + IEV++ L++GD V +S
Sbjct: 103 LTAIVPIHFLN-EEAP-VKKGGEISHTTTELEVTCLPKDLPEFIEVNLGALEVGDNVHLS 160
Query: 207 DIE 209
+++
Sbjct: 161 ELK 163
>gi|313885342|ref|ZP_07819093.1| ribosomal protein L25, Ctc-form [Eremococcus coleocola
ACS-139-V-Col8]
gi|312619448|gb|EFR30886.1| ribosomal protein L25, Ctc-form [Eremococcus coleocola
ACS-139-V-Col8]
Length = 205
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 84/184 (45%), Gaps = 41/184 (22%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG+ S R R QG IP ++ +D Q L ++ +IL+
Sbjct: 8 RTETGTAASKRARRQGLIPVTMYGKDF-----------ETQSLLINAREFEAILR----- 51
Query: 94 FFCSTTFPLQIRAGSGSSVLLDS-GKVLPIKVHRDEETGRI------LNLVFVWADDGTE 146
+ GS + L++ GK + V +D + + ++L + A+ +
Sbjct: 52 -----------KEGSNAVFELETDGKTQTVWV-KDFQKAALKSEFYSVDLEAISANQ--K 97
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L+V++P+V G ES K G ++++ S+ PA +I E+DV+ ++IGD +S
Sbjct: 98 LEVEIPLVLVGEESV----KVGIVETVINSILAEAPASNIPQSFELDVTGMEIGDTKAVS 153
Query: 207 DIEV 210
D+EV
Sbjct: 154 DLEV 157
>gi|148381066|ref|YP_001255607.1| 50S ribosomal protein L25 [Clostridium botulinum A str. ATCC 3502]
gi|153931183|ref|YP_001385439.1| 50S ribosomal protein L25 [Clostridium botulinum A str. ATCC 19397]
gi|153935360|ref|YP_001388846.1| 50S ribosomal protein L25 [Clostridium botulinum A str. Hall]
gi|148290550|emb|CAL84678.1| putative general stress protein [Clostridium botulinum A str. ATCC
3502]
gi|152927227|gb|ABS32727.1| 50S ribosomal protein L25 [Clostridium botulinum A str. ATCC 19397]
gi|152931274|gb|ABS36773.1| 50S ribosomal protein L25 [Clostridium botulinum A str. Hall]
Length = 178
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 76/180 (42%), Gaps = 33/180 (18%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R C S RD G++P +++ ++L + ++++++ V
Sbjct: 9 RNCKNSNKVRRD---GKVPGIIYGKNL-----------NNLMFEVGEIELNNMISQVGEH 54
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVD 150
+ G+ VL+ + P+K +H D E + + +
Sbjct: 55 GVTDINY-----EGTDYKVLIKEVQKDPVKKNVIHIDLEN---------VTNSSNLINAE 100
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
+P++F G + +KKGG ++ + S+K CP E + I VD+S DIG +SD+E+
Sbjct: 101 IPILFSGDDLI--MKKGGIVQKEKNSVKVRCPEEKLPNNIMVDLSQYDIGKTFRISDLEL 158
>gi|398942269|ref|ZP_10670207.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM41(2012)]
gi|398160821|gb|EJM49076.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM41(2012)]
Length = 200
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 82/182 (45%), Gaps = 25/182 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ + ++P +L+ E +
Sbjct: 5 TLNAEVRSDLGKGASRRLRRLASLVPAVVYGGE--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G+ +V++ + + P K G +L+ FV G +
Sbjct: 51 AKLLENEAAYSHIIELNV-GGTKQNVIIKALQRHPAK-------GHVLHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E P KKGG + + + ++ C + + IEVD++N ++G + +S
Sbjct: 103 LTAIVPVHFVG-EEAP-TKKGGEISHVVSEIEVTCLPKDLPEFIEVDLANAEVGSIIHLS 160
Query: 207 DI 208
D+
Sbjct: 161 DL 162
>gi|53804648|ref|YP_113532.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylococcus
capsulatus str. Bath]
gi|68053083|sp|Q60A15.1|RL25_METCA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|53758409|gb|AAU92700.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylococcus
capsulatus str. Bath]
Length = 202
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 86/211 (40%), Gaps = 42/211 (19%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQD------LLDKNTDRRSPSRKQILSTERKQIHSIL 87
R G S R R G++PAV++ LLD H ++
Sbjct: 12 RHQLGKGASRRLRHAGKVPAVLYGGGGEPVSLLLDH--------------------HKVV 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K++E S ++ +++L V R +++L F ++
Sbjct: 52 KNLENEATYSHVLTIRFDGREENAILK--------AVQRHPAKPVVMHLDFQRVSAADKI 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+V VP+ F ES G+KKGG + ++ C + + IEVD++ +DIG + +SD
Sbjct: 104 RVHVPLHFINQESSVGVKKGGVVSHGMVDVEVDCLPKDLPEYIEVDLAQVDIGGIIHLSD 163
Query: 208 ------IEVHPSWKLLSKNEKMPLCKISATK 232
+E+H + + + +P+ + A +
Sbjct: 164 LKLPAGVEIHALAQGVGHD--LPVASVHAPR 192
>gi|42524123|ref|NP_969503.1| 50S ribosomal protein L25 [Bdellovibrio bacteriovorus HD100]
gi|71153121|sp|Q6MJR4.1|RL25_BDEBA RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|39576331|emb|CAE80496.1| 50S ribosomal protein L25 [Bdellovibrio bacteriovorus HD100]
Length = 212
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 24/190 (12%)
Query: 33 PRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVEL 92
PRE TG S R+ +PAV++ +P+ + E++ + ++ E
Sbjct: 11 PRE-TGKHNSRGLRTSRNVPAVIYGA---------VTPTNVSV--GEKEIVKYNTRAYEN 58
Query: 93 PFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVP 152
F + +G VL+ S V P+ T R ++ F D ++V+V
Sbjct: 59 ALF---NLKSSDKTANGIVVLIKSVDVHPL-------TRRPQHVDFFALDLKKAVRVNVE 108
Query: 153 VVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
V +G GL +GG L + S++ C I D+SNL +GD + +SDI+V
Sbjct: 109 VRLEG--KAIGLSEGGLLNVVLRSVEVECLPTEIPEFFTADISNLAVGDALHVSDIKVSG 166
Query: 213 SWKLLSKNEK 222
S K+++ E+
Sbjct: 167 SVKMITGAEQ 176
>gi|296114646|ref|ZP_06833299.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter hansenii ATCC 23769]
gi|295979002|gb|EFG85727.1| 50S ribosomal protein L25/general stress protein Ctc
[Gluconacetobacter hansenii ATCC 23769]
Length = 206
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 143 DGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDR 202
+G ++ V+V + F G E PG+K+GG L +R ++ + ++ D+S LDI D
Sbjct: 100 EGQKVHVEVSITFTGEEVSPGIKRGGVLNIVRHTVDVVADPANMPEGFSADLSKLDIHDN 159
Query: 203 VFMSDIE 209
V D++
Sbjct: 160 VRWEDLK 166
>gi|28199877|ref|NP_780191.1| 50S ribosomal protein L25 [Xylella fastidiosa Temecula1]
gi|182682629|ref|YP_001830789.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella
fastidiosa M23]
gi|386083962|ref|YP_006000244.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella
fastidiosa subsp. fastidiosa GB514]
gi|417557352|ref|ZP_12208391.1| Ribosomal protein L25 (general stress protein Ctc) RplY [Xylella
fastidiosa EB92.1]
gi|71153679|sp|Q87A23.1|RL25_XYLFT RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|226694604|sp|B2IA79.1|RL25_XYLF2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|28057998|gb|AAO29840.1| 50S ribosomal protein L25 [Xylella fastidiosa Temecula1]
gi|182632739|gb|ACB93515.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Xylella
fastidiosa M23]
gi|307578909|gb|ADN62878.1| 50S ribosomal protein L25/general stress protein Ctc [Xylella
fastidiosa subsp. fastidiosa GB514]
gi|338180016|gb|EGO82923.1| Ribosomal protein L25 (general stress protein Ctc) RplY [Xylella
fastidiosa EB92.1]
Length = 207
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 25/217 (11%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I+A R+ G S R R G IPA+++ + + P Q L+ E+ I
Sbjct: 4 HQIKAQRRKDEGKGASRRLRHAGMIPAIIYGGE--------QRPVSIQ-LNHEQ-----I 49
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ + +F S+ L + VLL + P + ++++ F +
Sbjct: 50 WLAQQNEWFYSSILDLNVDGAGAEKVLLRDLQRHPYR-------QLVMHVDFQRVSSDAK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L V VP+ F + P K GG + + ++ C + + IEVD+S L++G + +
Sbjct: 103 LSVAVPLHFINQATSPAGKVGGVVITHELNEVQVSCLPKDLPEFIEVDLSTLNVGHVIHL 162
Query: 206 SDIEVHPSWKL---LSKNEKMPLCKISATKLENPEPA 239
SDI +L L K M + +E+ PA
Sbjct: 163 SDITFPIGVELSTRLDKEHDMAVVIAKHAVIEDDAPA 199
>gi|119505828|ref|ZP_01627894.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma
proteobacterium HTCC2080]
gi|119458326|gb|EAW39435.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma
proteobacterium HTCC2080]
Length = 216
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 29 IQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+QA R G S R R +G++P VV+ + + +S RK +
Sbjct: 7 VQAQVRVDEGKGASRRLRRLEGKVPGVVYGGE-----------AAAISISLIRKDLE--- 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K +E F ++ + + +++L D V R G +++ F+ +
Sbjct: 53 KMMEQETFYASVLNVNVDGSVETAILKD--------VQRHPAKGFPMHVDFLRVQADKAI 104
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
KV+VP+ F + C G+K GG ++ T ++ C I IEVD+S +++G V +S
Sbjct: 105 KVNVPLHFTNEDVCHGVKMGGGMVQHQATDMEVQCLPGDIPDYIEVDMSAVELGQIVHLS 164
Query: 207 DI 208
D+
Sbjct: 165 DV 166
>gi|88800290|ref|ZP_01115857.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Reinekea
blandensis MED297]
gi|88777005|gb|EAR08213.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Reinekea sp.
MED297]
Length = 208
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 83/197 (42%), Gaps = 22/197 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + + A+ RE G S R R + ++PAV++ R P Q L+ E +++
Sbjct: 2 STIYELNAVLREEHGKGASRRLRREKKVPAVIYG------GAKNRKP---QSLTLELREL 52
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
+K++E F S + I S ++L+D V R T +++
Sbjct: 53 ---VKAMENEAFFSHVLTINIGDKSEQAILMD--------VQRHPATDFPMHIDLERVTK 101
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
T + VP+ F G E K G L+ C + IEVDV+ L++G +
Sbjct: 102 STVVHKKVPIHFVGEEKVE--KSGAKALHAANELEITCKVGDLPEFIEVDVAALEVGAVL 159
Query: 204 FMSDIEVHPSWKLLSKN 220
+S++++ L+ N
Sbjct: 160 HLSELKLPKGVSLVELN 176
>gi|448747302|ref|ZP_21728962.1| Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-bindin
[Halomonas titanicae BH1]
gi|445564994|gb|ELY21107.1| Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-bindin
[Halomonas titanicae BH1]
Length = 214
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R+ ++PAVV+ + Q ++ E+ + K++E F S+ L I
Sbjct: 24 RANQQVPAVVYGGE-----------KGAQSIAVEKTAFY---KAIEDESFFSSVIKLMIE 69
Query: 106 AGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPG 163
V+ D + P+ H D F+ D E+ ++VP+ G E C G
Sbjct: 70 GKEEQVVVRDLQRHPFKPLLTHAD----------FLRVDATHEITINVPLHVTGEEKCVG 119
Query: 164 LK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+K +GG L + + C + + IEVD++ +++G + +SD+
Sbjct: 120 IKDQGGELHVLANEVAISCLPKDLPDFIEVDIAAVELGTTLHLSDL 165
>gi|359782578|ref|ZP_09285798.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
psychrotolerans L19]
gi|359369398|gb|EHK69969.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
psychrotolerans L19]
Length = 207
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 93/205 (45%), Gaps = 26/205 (12%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R+ G +PAV++ D ++P+ +++ K + +
Sbjct: 5 TLNAEVRSDLGKGASRRLRRNAGNVPAVIYGGD--------KAPTSITLVA---KDLTKM 53
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
L+S E + T + GS SVL+ + + R G +++ F+ G +
Sbjct: 54 LES-EAAYASVITLKVD---GSNESVLVKA-------LQRHPSKGYVMHADFLRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L VP+ F E+ G+K+ GG + ++ C + + IEVD++ +++ V +
Sbjct: 103 LTAHVPLHFMNQETSVGVKQQGGEILHTINEVEVSCLPKDLPEFIEVDMAKVELDQIVHL 162
Query: 206 SDIEVHPSWKL--LSKNEKMPLCKI 228
SD+ V +L L+ +P+ I
Sbjct: 163 SDLNVPAGVELVSLAHGSDLPVASI 187
>gi|408374420|ref|ZP_11172107.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax
hongdengensis A-11-3]
gi|407765695|gb|EKF74145.1| 50S ribosomal protein L25/general stress protein Ctc [Alcanivorax
hongdengensis A-11-3]
Length = 213
Score = 45.1 bits (105), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Query: 29 IQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A R G S R R Q R+P +++ + + Q++S E +++
Sbjct: 7 LNAESRSDAGKGASRRLRRLQERVPGILYGGE-----------AEPQMISVELRELK--- 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K++E F S L++ +VL D + R G ++ F+ D ++
Sbjct: 53 KALETEAFYSHVLTLKLDGADVQAVLRD--------MQRHPAKGHPTHVDFLRVDKTHKI 104
Query: 148 KVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ VP+ F G+KK GG ++ + ++ C +++ IEVD++ +++ V +S
Sbjct: 105 TMQVPLHFINEAGSVGVKKQGGEIQHNISEVEVSCLPQNLPEYIEVDMAAVELNQVVHLS 164
Query: 207 DIEVHPSWKL----LSKNEKMPLCKISATKL 233
D+++ +L L ++ P+ I A K+
Sbjct: 165 DLKLPKGVELPQLALGEDHDQPVVAIHAPKV 195
>gi|307718726|ref|YP_003874258.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6192]
gi|306532451|gb|ADN01985.1| 50S ribosomal protein L25 [Spirochaeta thermophila DSM 6192]
Length = 209
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 77/174 (44%), Gaps = 26/174 (14%)
Query: 46 RSQGRIPAVVFA-QDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQI 104
R +G+IP VV+ +D + D R R H + + L +
Sbjct: 23 RREGKIPGVVYGGKDQVPVALDAREFHRT---------FHGTVAE-------NVIVDLSL 66
Query: 105 RAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGL 164
VL+ + PI+ G+ ++L F+ + +LK VP+ +G + G+
Sbjct: 67 EGKETRQVLIKDYQYDPIR-------GQYIHLDFMEINPEKKLKTHVPIHLEG--TPEGV 117
Query: 165 KKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
KKGG L+ L+ C + + I +D+S+L++GD + + DI+ ++L+
Sbjct: 118 KKGGLLEFFVQELEVTCLPKDLPEVIVLDISSLEVGDSLHVQDIQAPDGVEILN 171
>gi|118444097|ref|YP_877070.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
novyi NT]
gi|118134553|gb|ABK61597.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Clostridium
novyi NT]
Length = 194
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
Query: 123 KVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCP 182
++ D +G ++++ F + +K+ +PV F G+ES K L++ T ++
Sbjct: 76 EIQNDALSGNVIHVDFQNVNKNEVIKMTIPVEFTGIESLQSRKL--ILETFITEIEMQGK 133
Query: 183 AEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSK 219
E I I +D S ++ D++F+ DI++ +LLS+
Sbjct: 134 VEEIPENIVIDASTMNFDDKIFVHDIKLPEGIRLLSE 170
>gi|430809763|ref|ZP_19436878.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
sp. HMR-1]
gi|429497787|gb|EKZ96310.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
sp. HMR-1]
Length = 203
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 80/182 (43%), Gaps = 25/182 (13%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI-HSILKS 89
A R G+ S R R+ G+ P +++ + +++ + + H++ K
Sbjct: 5 AFERSVQGTGASRRLRNSGKTPGIIYG-----------GAAEPKMIELDHNALWHALKKE 53
Query: 90 VELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKV 149
F S+ L++ AG LL + ++ P K +L++ F ++ V
Sbjct: 54 A----FHSSILDLEV-AGKSEKALLRAFQMHPFKP-------LVLHVDFQRVSASEKIHV 101
Query: 150 DVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VP+ F E+ PG+K G G + I L+ C + IEVD++ ++ + +SD+
Sbjct: 102 KVPLHFMNQETAPGVKLGHGIVSHILNDLEVSCLPADLPEFIEVDLAAAELNQTIHLSDL 161
Query: 209 EV 210
++
Sbjct: 162 KL 163
>gi|398904464|ref|ZP_10652307.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM50]
gi|398175843|gb|EJM63583.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM50]
Length = 199
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEVRSDLGKGASRRLRRLASLVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G+ +V++ + + R G +++ FV G +
Sbjct: 51 AKLLENEAAYSHIIELNV-GGTKQNVIIKA-------LQRHPAKGHVMHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E+ P +KKGG + + + ++ C + + IEVD+++ ++G + +S
Sbjct: 103 LTAIVPVHFVG-EAAP-IKKGGEISHVVSEIEVSCLPKDLPEFIEVDLADAEVGAIIHLS 160
Query: 207 DIE 209
D++
Sbjct: 161 DLK 163
>gi|395493845|ref|ZP_10425424.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. PAMC 26617]
Length = 230
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 31/192 (16%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S T+ A RE G S R +GR+PAV++ ++++ LS ++
Sbjct: 2 SEQMTLAAETREQVGKGASRLLRREGRVPAVIYG-------------NKQEPLSIHVEE- 47
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSG----KVLPIKVHRDEETGRILNLVFV 139
++++ + F + S V+LD+G + LP V D T R +++ F+
Sbjct: 48 KALMRLLNTGHFMN------------SVVMLDAGGQQVRTLPKDVTFDVVTERPVHVDFL 95
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLD 198
+ + V VPVVF + PG+KK GG L R ++ +C A I +I + ++ L+
Sbjct: 96 RIGAHSTVTVAVPVVFVDEDDAPGIKKDGGVLNVTRHEIEVVCDAAEIPGEITISLAGLE 155
Query: 199 IGDRVFMSDIEV 210
+G + +SD+++
Sbjct: 156 VGASIHISDVKL 167
>gi|387126393|ref|YP_006294998.1| 50S ribosomal protein L25 [Methylophaga sp. JAM1]
gi|386273455|gb|AFI83353.1| LSU ribosomal protein L25p [Methylophaga sp. JAM1]
Length = 224
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/182 (21%), Positives = 76/182 (41%), Gaps = 21/182 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G S R R G++PAVV+ + + P +S Q+ ++
Sbjct: 7 VHAEARTDQGKGASRRLRHSGKVPAVVYGAE--------KEPVS---ISINHNQL---IR 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ F + L I VL D + +I++ F+ D +
Sbjct: 53 HLAEEAFYAHILTLVIDGKKNQVVLKDLQR-------HPANDNKIIHADFLRIDSKHAMT 105
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ +P+ F E G+K GG + + T ++ C + + IEVDV+ L + + + +S++
Sbjct: 106 MTIPLHFVNEEKAVGVKAGGLISHLMTEVEISCLPKDLPEYIEVDVAKLAMDEAIHLSEL 165
Query: 209 EV 210
++
Sbjct: 166 KL 167
>gi|430751829|ref|YP_007214737.1| 50S ribosomal protein L25 [Thermobacillus composti KWC4]
gi|430735794|gb|AGA59739.1| ribosomal protein L25, Ctc-form [Thermobacillus composti KWC4]
Length = 212
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 88/196 (44%), Gaps = 25/196 (12%)
Query: 44 RDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQ 103
R R QG++P ++ S ++ E K++ ++L+ + L+
Sbjct: 20 RLRDQGKVPGNLYGGKA----------SGSTPIAVEEKELLALLR-----HHPNAVLDLE 64
Query: 104 IRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPG 163
+ AGS + ++ +G V RD T +L++ D T ++ P+ G P
Sbjct: 65 M-AGSDTRPVMVAG------VQRDPLTRNVLHIDLREIDLKTPVRTHAPLEPAG--ESPA 115
Query: 164 LKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKM 223
K+GG ++ + L+ C I I VDVS L +GD + + D++V P L+ + +
Sbjct: 116 EKEGGIVQMLLHELEIECLPADIPDAIPVDVSGLKLGDSLVVRDLKVPPGV-LVKTDPSL 174
Query: 224 PLCKISATKLENPEPA 239
+ + A + ++ EPA
Sbjct: 175 VVVTVLAPQKDDAEPA 190
>gi|424842939|ref|ZP_18267564.1| ribosomal protein L25, Ctc-form [Saprospira grandis DSM 2844]
gi|395321137|gb|EJF54058.1| ribosomal protein L25, Ctc-form [Saprospira grandis DSM 2844]
Length = 196
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 49/99 (49%), Gaps = 3/99 (3%)
Query: 130 TGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPK 189
T +IL++ F G LK +VP+ G S G K GG L LK L E +
Sbjct: 82 TDKILHMDFQAIVAGQTLKTEVPIRLVG--SSKGQKVGGTLVQKMRKLKVLIQPESLCAY 139
Query: 190 IEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKI 228
I DVS LD+G + + DI+V ++++ N +P+ +
Sbjct: 140 IPADVSPLDLGKSMRVRDIQVTEGIEIMT-NSSIPVASV 177
>gi|404254170|ref|ZP_10958138.1| 50S ribosomal protein L25/general stress protein Ctc [Sphingomonas
sp. PAMC 26621]
Length = 231
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 92/192 (47%), Gaps = 31/192 (16%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S T+ A RE G S R +GR+PAV++ ++++ LS ++
Sbjct: 2 SEQMTLAAETREQVGKGASRLLRREGRVPAVIYG-------------NKQEPLSIHVEE- 47
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSG----KVLPIKVHRDEETGRILNLVFV 139
++++ + F + S V+LD+G + LP V D T R +++ F+
Sbjct: 48 KALMRLLNTGHFMN------------SVVMLDAGGQQVRTLPKDVTFDVVTERPVHVDFL 95
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLD 198
+ + V VPVVF + PG+KK GG L R ++ +C A I +I + ++ L+
Sbjct: 96 RIGAHSTVTVAVPVVFVDEDDAPGIKKDGGVLNVTRHEIEVVCDAAEIPGEISISLAGLE 155
Query: 199 IGDRVFMSDIEV 210
+G + +SD+++
Sbjct: 156 VGASIHISDVKL 167
>gi|90022897|ref|YP_528724.1| 50S ribosomal protein L25/general stress protein Ctc
[Saccharophagus degradans 2-40]
gi|109893392|sp|Q21FL7.1|RL25_SACD2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|89952497|gb|ABD82512.1| LSU ribosomal protein L25P [Saccharophagus degradans 2-40]
Length = 210
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 24/182 (13%)
Query: 29 IQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A R+ +G S R R G +PA+V+ R++P I E +
Sbjct: 8 LNAEARDVSGKGASRRLRREAGLVPAIVYG--------GRKNPQNVTITLRE------LT 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K +E F S L I S +L D + R T ++ F+ +
Sbjct: 54 KHLENEAFYSHIITLNIGDSSEQVILKD--------LQRHPATNFAMHADFLRVSKTKKF 105
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
VP+ F + G+K +GG ++ T L+ C + IEVD++N+++G V +S
Sbjct: 106 NTKVPLHFINEATSKGVKEQGGKVQHSMTELEIACLPADLPEFIEVDLANVELGGIVHIS 165
Query: 207 DI 208
DI
Sbjct: 166 DI 167
>gi|389799528|ref|ZP_10202508.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
sp. 116-2]
gi|388442208|gb|EIL98418.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
sp. 116-2]
Length = 221
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S H I+A R+ G S R R +PAVV+ ++P QI +
Sbjct: 2 SKTHEIKAQSRKDEGKGASRRLRRASFVPAVVYGAG--------QAPESIQI------EH 47
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
++IL + + +F S+ L + G VL+ + P K ++++ F+ D+
Sbjct: 48 NTILLAAKNEWFFSSVLDLNVD-GKVQKVLVRDWQKHPFK-------QLMMHMDFLRVDE 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDR 202
++V VP+ F E K G + S T ++ C + + IE+D+++L GD
Sbjct: 100 KAAIRVSVPLHFLNKEKSAAAKTSGVVISHNLTEVEITCLPKDLPESIELDLADLKPGDI 159
Query: 203 VFMSDIEVHPSWKLLS 218
+ +S +++ + +L++
Sbjct: 160 IHLSQLKLPKNVELVA 175
>gi|352086255|ref|ZP_08953796.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodanobacter
sp. 2APBS1]
gi|351679554|gb|EHA62691.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Rhodanobacter
sp. 2APBS1]
Length = 221
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S H I+A R+ G S R R +PAVV+ ++P QI +
Sbjct: 2 SKTHEIKAQSRKDEGKGASRRLRRASFVPAVVYGAG--------QAPESIQI------EH 47
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
++IL + + +F S+ L + G VL+ + P K ++++ F+ D+
Sbjct: 48 NTILLAAKNEWFFSSVLDLNVD-GKVQKVLVRDWQKHPFK-------QLMMHMDFLRVDE 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDR 202
++V VP+ F E K G + S T ++ C + + IE+D+++L GD
Sbjct: 100 KAAIRVSVPLHFLNKEKSAAAKTSGVVISHNLTEVEITCLPKDLPESIELDLADLKPGDI 159
Query: 203 VFMSDIEVHPSWKLLS 218
+ +S +++ + +L++
Sbjct: 160 IHLSQLKLPKNVELVA 175
>gi|322379486|ref|ZP_08053852.1| 50S ribosomal protein L25 [Helicobacter suis HS1]
gi|322380467|ref|ZP_08054666.1| 50S ribosomal protein L25 [Helicobacter suis HS5]
gi|321147112|gb|EFX41813.1| 50S ribosomal protein L25 [Helicobacter suis HS5]
gi|321148093|gb|EFX42627.1| 50S ribosomal protein L25 [Helicobacter suis HS1]
Length = 180
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 126 RDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEH 185
+D + ++++ + G + K +PV GV G+K G L + + C EH
Sbjct: 77 KDPISNTLMHVDLMVLQKGVKSKFYIPVKIHGV--AVGIKNKGILMLSKHRIHVECTPEH 134
Query: 186 ISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLL 217
+ ++DVSNLD+GD + + D+++ K+L
Sbjct: 135 LFSNFDLDVSNLDVGDAILVRDLQIPAHVKVL 166
>gi|114565644|ref|YP_752798.1| 50S ribosomal protein L25/general stress protein Ctc
[Syntrophomonas wolfei subsp. wolfei str. Goettingen]
gi|122319178|sp|Q0B0S7.1|RL25_SYNWW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|114336579|gb|ABI67427.1| LSU ribosomal protein L25P [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 209
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 123 KVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCP 182
++ R+ +G++++L F+ + ++ +V V+ G E +KKGG L++ ++ LC
Sbjct: 79 EIQRNPVSGQLIHLDFLSVNLNEKINSNVGVLLGGEEEV--MKKGGILQAGLKEVEVLCF 136
Query: 183 AEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ + + D+S+L+IG+ + ++D+ V ++L++ E
Sbjct: 137 PQDLPEYLSADISSLEIGETLHVADLIVPAGVEILTEAE 175
>gi|197119140|ref|YP_002139567.1| 50S ribosomal protein L25 [Geobacter bemidjiensis Bem]
gi|226736325|sp|B5EHX2.1|RL25_GEOBB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|197088500|gb|ACH39771.1| ribosomal protein L25 [Geobacter bemidjiensis Bem]
Length = 197
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 81/188 (43%), Gaps = 36/188 (19%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
++A RE TG + R R+ GR+PAVV+ + + + + ++ E + H
Sbjct: 5 VLKAELREQTGKGICRRLRAAGRVPAVVYGKGIAPVSISLGQKELSEAIAGEGGRNHI-- 62
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLL-----DSGKVLP--IKVHRDEETGRILNLVFVW 140
L C+ +G+SV++ DS K +P + +H+ +NL
Sbjct: 63 ----LTLECAGEL-------NGASVIVADLLRDSLKNVPRHVDLHK-------INL---- 100
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
AD KV V V V + G+K GG+L ++ C HI I VDV+ L IG
Sbjct: 101 AD-----KVKVHVKLNLVGTPAGVKAGGFLDFAMHEVEVECLPVHIPAHINVDVAELLIG 155
Query: 201 DRVFMSDI 208
V + I
Sbjct: 156 HSVHVGQI 163
>gi|418475413|ref|ZP_13044814.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces
coelicoflavus ZG0656]
gi|371543978|gb|EHN72737.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces
coelicoflavus ZG0656]
Length = 195
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 8/128 (6%)
Query: 113 LLDSGK----VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGG 168
LL GK V+P V RD G + ++ + G + VD+PV +G E PG G
Sbjct: 62 LLIDGKGTQLVIPKSVQRDPIKGFLEHVDLLMVKSGETVTVDIPVQAEG-ELAPG---GF 117
Query: 169 YLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKI 228
L+ + +L A HI ++ V V+ L+ V DIE+ KL + E + L +
Sbjct: 118 LLEYVLDALPVEAEATHIPQQVTVSVAGLEAPASVLAKDIELPSGVKLAVEPETVVLQVL 177
Query: 229 SATKLENP 236
SA E P
Sbjct: 178 SAQAEEAP 185
>gi|149369577|ref|ZP_01889429.1| 50S ribosomal protein L25/general stress protein Ctc [unidentified
eubacterium SCB49]
gi|149357004|gb|EDM45559.1| 50S ribosomal protein L25/general stress protein Ctc [unidentified
eubacterium SCB49]
Length = 204
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 93/206 (45%), Gaps = 31/206 (15%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDL-LDKNTDRRSPSRKQILSTERKQIHSI 86
TI RE G + + R G++P VV+ + + + D + S+ ++ T +H++
Sbjct: 5 TINGSQRESVGKKATKALRDAGKVPCVVYGGEAPIHFSADELAFSK--LVYTP--DVHTV 60
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+ +EL G +L + P+ T RIL++ F D E
Sbjct: 61 V--IELD-------------GKKVDAILQDIQFHPV-------TDRILHIDFYQISDDKE 98
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ +++PV G + G++ GG L+ + L+ ++ IEVD++ + IGD+++++
Sbjct: 99 VMLEIPVRITG--NSRGVRNGGTLRIVSRKLRVKAIPANLPDVIEVDITEMKIGDKLYVT 156
Query: 207 DIEVHPSWKLLSKNEKMPLCKISATK 232
L S NE +C++ ++
Sbjct: 157 AAANDKFTILHSDNE--VICQVRTSR 180
>gi|398343668|ref|ZP_10528371.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira
inadai serovar Lyme str. 10]
Length = 209
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 24/191 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I R TG V+ R R+ G +P + + + K++ K +HS
Sbjct: 3 HKITVKKRTETGKNVNNRLRASGMVPINIIGSG----KASSGAVNEKEL----DKLVHSG 54
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
++ ST L+I G G+ KV ++ R E RI ++ F + G +
Sbjct: 55 IRQ-------STLIDLEIE-GEGTH------KVYVKEIQRFPEIDRIRHVDFYKVEPGKK 100
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ + V +G+ G K GG + ++ E + + +DVS+LD+GD + +S
Sbjct: 101 IITKIGVRTEGL--AKGSKMGGQFDHLIHEIRVKTIPEDLLESLVIDVSDLDVGDSIKVS 158
Query: 207 DIEVHPSWKLL 217
++V SW++L
Sbjct: 159 QLKVPASWEIL 169
>gi|389807566|ref|ZP_10204155.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
thiooxydans LCS2]
gi|388443890|gb|EIM00022.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
thiooxydans LCS2]
Length = 221
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 89/196 (45%), Gaps = 23/196 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S H I+A R+ G S R R +PAVV+ ++P QI +
Sbjct: 2 SKTHEIKAQSRKDEGKGASRRLRRASFVPAVVYGAG--------QAPESIQI------EH 47
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
++IL + + +F S+ L + G VL+ + P K ++++ F+ D+
Sbjct: 48 NTILLAAKNEWFFSSVLNLNVD-GKVQKVLVRDWQKHPFK-------QLMMHMDFLRVDE 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDR 202
++V VP+ F E K G + S T ++ C + + IE+D+++L GD
Sbjct: 100 KAAIRVSVPLHFLNKEKSAAAKTSGVVISHNLTEVEITCLPKDLPESIELDLADLKPGDI 159
Query: 203 VFMSDIEVHPSWKLLS 218
+ +S +++ + +L++
Sbjct: 160 IHLSQLKLPKNVELVA 175
>gi|118579182|ref|YP_900432.1| 50S ribosomal protein L25/general stress protein Ctc [Pelobacter
propionicus DSM 2379]
gi|166223702|sp|A1AM04.1|RL25_PELPD RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|118501892|gb|ABK98374.1| LSU ribosomal protein L25P [Pelobacter propionicus DSM 2379]
Length = 199
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 79/195 (40%), Gaps = 23/195 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG +S + RS +P VV+ + + + ++ E Q + I
Sbjct: 11 RSKTGKGISRKLRSADMVPGVVYGKGMDPMAVSINYRELQAAMAGEGGQNNLI------- 63
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
G GS LD + + RD G ++ + +L+V VPV
Sbjct: 64 ----------TLVGGGS---LDQSMAIVADLQRDAVKGTYKHVDLHRVNMSEKLRVTVPV 110
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
V KG + G+K+GG L L C +I IE+DV++L + + + +I +
Sbjct: 111 VLKG--TAIGVKEGGLLDFAHHELHVECLPGNIPDHIEIDVTSLAVAHSIHVGEIALPEG 168
Query: 214 WKLLSKNEKMPLCKI 228
K+L N K P+ +
Sbjct: 169 VKVLD-NPKTPVVSV 182
>gi|192359843|ref|YP_001981164.1| 50S ribosomal protein L25/general stress protein Ctc [Cellvibrio
japonicus Ueda107]
gi|226736293|sp|B3PJN6.1|RL25_CELJU RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|190686008|gb|ACE83686.1| ribosomal protein L25, Ctc-form [Cellvibrio japonicus Ueda107]
Length = 203
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 24/184 (13%)
Query: 29 IQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A R G S R R ++PA+++ ++P + E +L
Sbjct: 7 LDATARNDLGKGASRRLRRLADQVPAIIYG--------GSKAPVNVSVSHNE------LL 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K ++ F S L I S S +L D V R ++L+L F+ D T+L
Sbjct: 53 KHLQHEAFFSHVIDLNIDGTSESVILKD--------VQRHPSKAQVLHLDFLRVDKNTKL 104
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
VP+ F + G+K +GG + T L C + + IEVD++ ++ G + +S
Sbjct: 105 HKQVPLHFINEATSVGVKTQGGKVVHNLTQLDVTCLPQDLPEFIEVDLAAIEAGQILHIS 164
Query: 207 DIEV 210
D+++
Sbjct: 165 DLKL 168
>gi|402299311|ref|ZP_10818933.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
alcalophilus ATCC 27647]
gi|401725515|gb|EJS98793.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
alcalophilus ATCC 27647]
Length = 208
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 15/126 (11%)
Query: 100 FPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADDGTELKVDVPVVFK 156
F L + G V+L + PIK VH D F D +E++ +V +
Sbjct: 61 FSLDVDGGKKHQVMLYDLQTDPIKNEFVHAD----------FFEVDMTSEIEAEVSIHLI 110
Query: 157 GVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
G PG GG + + ++ C I IEVD+S+L IGD + ++DI S +
Sbjct: 111 G--DSPGANAGGIVAHMMHTVVVHCLPSDIPENIEVDISSLHIGDAIQIADIRERVSVDI 168
Query: 217 LSKNEK 222
+++E+
Sbjct: 169 KNEDEE 174
>gi|333373027|ref|ZP_08464946.1| 50S ribosomal protein L25 [Desmospora sp. 8437]
gi|332971074|gb|EGK10044.1| 50S ribosomal protein L25 [Desmospora sp. 8437]
Length = 223
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 86/182 (47%), Gaps = 32/182 (17%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R +GR+PAVV+ + + +++ E Q+ +L+ S + LQ
Sbjct: 40 RREGRVPAVVYGKGM-----------ENELIHLEAGQVIKMLQQ----EGTSAIYELQYP 84
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV---VFKGVESCP 162
G V++ ++ +D +I+++ F E+K+D P+ V+ + P
Sbjct: 85 GGKSRQVMIR-------ELQQDRIKDKIIHIDF------NEVKLDEPIDTEVYIELTGEP 131
Query: 163 -GLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
G+K+GG L+ S++ C + ++E ++++L IGD + +++ + +LL+ E
Sbjct: 132 TGVKEGGILQHQLRSVEVRCLPADLPDRLEGEITHLAIGDTLTAAELPIPDRVELLTDPE 191
Query: 222 KM 223
+M
Sbjct: 192 EM 193
>gi|373953769|ref|ZP_09613729.1| 50S ribosomal protein L25 [Mucilaginibacter paludis DSM 18603]
gi|373890369|gb|EHQ26266.1| 50S ribosomal protein L25 [Mucilaginibacter paludis DSM 18603]
Length = 194
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 86/184 (46%), Gaps = 29/184 (15%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI PRE G R + R +G++PAV++ + + L+ + +++
Sbjct: 5 TISGSPRESVGKRDAKLLRYEGKVPAVLYGG------------ATQTHLAVSVTDLKAVV 52
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + F L++ + +++ D I+ H E I+++ F+ D +
Sbjct: 53 YTPVVHFIN-----LEVAGKTAQAIIKD------IQFHPLTE--EIIHVDFLELDAAKPV 99
Query: 148 KVDVPVVFKGVESCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+++P+ G + PG+K GG L + +R P +HI I+V ++ L++G V +S
Sbjct: 100 TIEIPIRLTG--TSPGVKTGGKLVQKLRKLRIKALPGDHID-NIDVSIATLEVGKSVRVS 156
Query: 207 DIEV 210
D+++
Sbjct: 157 DLKL 160
>gi|354581946|ref|ZP_09000849.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus
lactis 154]
gi|353200563|gb|EHB66023.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Paenibacillus
lactis 154]
Length = 181
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 79/178 (44%), Gaps = 25/178 (14%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R +GR+P VVF KN D +I+ KQ LK S LQ+
Sbjct: 22 RQKGRLPGVVFG-----KNAD------NEIIHISTKQFEKWLKR-----GASGFIELQME 65
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
+VLL+ + R+ T ++++ F G ++ + V F G + G K
Sbjct: 66 GDRSMTVLLED-------LQRNPVTRALVHVDFQLVQTGEIIRTKLGVKFVG--TPIGTK 116
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKM 223
GG ++ ++ + + +E+D+S +++GD +F+ D+ + P ++S + ++
Sbjct: 117 SGGVVQIQDPYVEVEALPKDLPTTVELDISAMEVGDTLFVKDLTLPPEVTVISGDNEL 174
>gi|261416824|ref|YP_003250507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|385791648|ref|YP_005822771.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373280|gb|ACX76025.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|302326515|gb|ADL25716.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 207
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 82/191 (42%), Gaps = 23/191 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T++A R +R +AR R G+IPAV + + + KN +++L+ ++
Sbjct: 5 TLKAASRVLGANRDNARLRKAGQIPAVYYGKGIEAKNISVSEIDLRKVLAPGKRY----- 59
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
T L+I +G+ L+ S V +D T +I ++ F+ D +
Sbjct: 60 ----------TLLDLEIDGKAGNPALVYS-------VQKDALTQKITHVDFIKIADDEFV 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KV +PV G+ + G + + R + PA I +E+D+SN + + D
Sbjct: 103 KVRIPVKLSGLPVGVKTQGGLFSQEARYLMLAAKPA-SIPSVLELDISNFETNVTFYAKD 161
Query: 208 IEVHPSWKLLS 218
++ + L S
Sbjct: 162 FKLPENVTLAS 172
>gi|428218486|ref|YP_007102951.1| 50S ribosomal protein L25 [Pseudanabaena sp. PCC 7367]
gi|427990268|gb|AFY70523.1| LSU ribosomal protein L25P [Pseudanabaena sp. PCC 7367]
Length = 194
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIE 191
++ +L F + + +DVP+ F G G+K GG L + +K CP ++ KI+
Sbjct: 87 QVFHLSFFAIESQKAVDLDVPLNFIGTPK--GIKVGGVLDILIKEVKVSCPPNNVPEKID 144
Query: 192 VDVSNLDIGDRVFMSDIEVHPSWKLLS 218
+ +S+LD+G + + DI + +++
Sbjct: 145 IHISHLDVGKGIRVGDIPLEDGQVMIT 171
>gi|339499419|ref|YP_004697454.1| 50S ribosomal protein L25 [Spirochaeta caldaria DSM 7334]
gi|338833768|gb|AEJ18946.1| 50S ribosomal protein L25 [Spirochaeta caldaria DSM 7334]
Length = 210
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 86/201 (42%), Gaps = 35/201 (17%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+ A R TGS +AR R G+IPAVV+ RS I+
Sbjct: 5 VLTAQKRAVTGSADAARLRRNGKIPAVVYG----------RSGQAMSIV----------- 43
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVL---LDSGK--VLPIKVHRDEETGRILNLVFVWAD 142
+ F +I+ S S++L +D + V RD G +++ F +
Sbjct: 44 -------LDALDFGRKIKGVSESTLLNLSIDGAQHEVFIKDTQRDIFKGSFIHVDFYEVE 96
Query: 143 DGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDR 202
G + VPV G + G++ GG L++ L+ C + + I++DV+NL +
Sbjct: 97 KGKTVHAKVPVRVIG--TAEGVRLGGILEAPLHELEVECLPKDLPEHIDIDVTNLKANEA 154
Query: 203 VFMSDIEVHPSWKLLSKNEKM 223
+ + D+++ ++L+ E++
Sbjct: 155 LHVRDLKLASEIRVLTNPEQV 175
>gi|147676447|ref|YP_001210662.1| 50S ribosomal protein L25/general stress protein Ctc [Pelotomaculum
thermopropionicum SI]
gi|226736346|sp|A5D632.1|RL25_PELTS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|146272544|dbj|BAF58293.1| ribosomal protein L25 [Pelotomaculum thermopropionicum SI]
Length = 209
Score = 44.7 bits (104), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 82/195 (42%), Gaps = 42/195 (21%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
R +G IPAVV+ KN S ++ + ++ IL+
Sbjct: 22 REKGMIPAVVYG-----KNVGSLS------IAVDAGELQKILE----------------- 53
Query: 106 AGSGSSVLL-----DSGK-----VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVF 155
G+GS+ L+ ++GK VL +V RD +++ F + VPV
Sbjct: 54 -GAGSNALIRMKIKENGKIRKHNVLVKEVQRDPVRRELIHADFHQVSLKDRVHATVPVHL 112
Query: 156 KGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWK 215
G S G +GG L + ++ C A I I VDVS L IGD + ++D+ + P +
Sbjct: 113 TG--SAAGTVEGGVLTPLLRRVEMECLASEIPEAITVDVSGLRIGDTITVADLPLPPGVR 170
Query: 216 LLSKNEKMPLCKISA 230
L E P+ ++A
Sbjct: 171 ALEDPEA-PVVTVTA 184
>gi|376297953|ref|YP_005169183.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio
desulfuricans ND132]
gi|323460515|gb|EGB16380.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Desulfovibrio
desulfuricans ND132]
Length = 206
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 59 DLLDKNTDRRS-----PSRKQILSTERKQIHSILKSVELPFFCSTTFPLQ-IRAGSGSS- 111
DLL N RS P+R+ S I+ K +P PLQ A G+S
Sbjct: 3 DLLKLNVQERSEMGKGPNRRLRASGMVPGIYYDAKGANIPVKVQMV-PLQKTYAAVGNSQ 61
Query: 112 ----VLLDSGK-----VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCP 162
VL GK L +V + G ++ F D E+KV VP F+ V +
Sbjct: 62 VFELVLERGGKTETMPALLWRVRNEPVKGVPEHVDFFGVDLTKEIKVAVP--FEIVGNSK 119
Query: 163 GLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
G+K GG ++ R ++ +C I I +D+++LD+ D V + D+
Sbjct: 120 GVKLGGVMEQYREHIEVICKPMDIPEAIVIDITDLDVMDHVHIEDV 165
>gi|224510801|pdb|3FIN|Z Chain Z, T. Thermophilus 70s Ribosome In Complex With Mrna, Trnas
And Ef- Tu.Gdp.Kirromycin Ternary Complex, Fitted To A
6.4 A Cryo-Em Map. This File Contains The 50s Subunit
Length = 177
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 138 FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
FV +D+ E+ V P+ F G + G++ GG L+ I + +I IEVDVS L
Sbjct: 87 FVLSDEPVEMYV--PLRFVGTPA--GVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGL 142
Query: 198 DIGDRVFMSDIEVHPSWKLLSKNEK 222
+IGD + SD+++ P +L E+
Sbjct: 143 EIGDSLHASDLKLPPGVELAVSPEE 167
>gi|421744065|ref|ZP_16182072.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SM8]
gi|406687526|gb|EKC91540.1| ribosomal protein L25, Ctc-form [Streptomyces sp. SM8]
Length = 196
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 29/182 (15%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A R G + R R + ++P VV+ P+ H +L
Sbjct: 6 ISAETRSEFGKGAARRIRRESKVPGVVYGHG--------AEPA------------HVVLP 45
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
EL T+ L G S L V+P V RD G ++++ + G +++
Sbjct: 46 GHELMMALKTSNVLISLDLGGKSEL-----VIPKAVQRDALKGHLVHIDLLTVKRGEKVQ 100
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V++PVV +G + PG L+ + ++L A +I + V V+ LD GD V DI
Sbjct: 101 VEIPVVAEG-DLAPG---ANLLEHVLSALPVEAEATNIPESLTVSVAGLDAGDSVLAKDI 156
Query: 209 EV 210
++
Sbjct: 157 KL 158
>gi|392420014|ref|YP_006456618.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri CCUG 29243]
gi|390982202|gb|AFM32195.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri CCUG 29243]
Length = 205
Score = 44.7 bits (104), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 92/210 (43%), Gaps = 26/210 (12%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R+ +PAV++ D ++P IL+ +
Sbjct: 5 TLNAQVRSDLGKGASRRLRRNAALVPAVIYGGD--------KAPQSISILAKD------F 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G SVL+ + + P K +L+ FV G +
Sbjct: 51 AKLLENEASFSHVLNLNVD-GQNESVLIKALQRHPAK-------SFVLHADFVRVVAGHK 102
Query: 147 LKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L VP+ F ES G+K+ GG + ++ C + + IEVD+ N+++G + M
Sbjct: 103 LTATVPLHFINQESSVGVKQQGGEILHNLNEVEVSCLPQDLPEFIEVDMINVEVGQVLHM 162
Query: 206 SDIEVHPSWKL--LSKNEKMPLCKISATKL 233
+DI++ +L L+ +P+ + A ++
Sbjct: 163 TDIKLPKGVELVALAHGSDLPVANVHAPRV 192
>gi|418676376|ref|ZP_13237659.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|421109310|ref|ZP_15569831.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri str. H2]
gi|400323305|gb|EJO71156.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri serovar
Grippotyphosa str. RM52]
gi|410005499|gb|EKO59289.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri str. H2]
Length = 212
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 24/191 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I R TG + R R G IP + + + + K++ K +HS
Sbjct: 7 HKIAVKKRTTTGKNENNRLRFSGMIPVNIIGGGVATSG----AVNEKEL----EKMVHSG 58
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
++ ST L + G G+ KV ++ R E RI ++ F G +
Sbjct: 59 IRQ-------STLIELDVE-GQGTQ------KVFVKEIQRFPEIDRIRHVDFYKVVPGQK 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ + + GV G K GG + I ++ E + + +DV++LD+GD + +S
Sbjct: 105 IVTKIGIETTGV--AKGSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSIKIS 162
Query: 207 DIEVHPSWKLL 217
++V SW++L
Sbjct: 163 QLKVPASWEIL 173
>gi|393759956|ref|ZP_10348768.1| 50S ribosomal protein L25/general stress protein Ctc [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
gi|393161768|gb|EJC61830.1| 50S ribosomal protein L25/general stress protein Ctc [Alcaligenes
faecalis subsp. faecalis NCIB 8687]
Length = 198
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 24/197 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R+ G+ S R R GR+PA+V+ + + ++S + +I+ L+
Sbjct: 5 ATSRDVQGTSASRRLRHAGRVPAIVYGGE-----------EQPVVISLDHNEIYHNLRK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F ++ +++ G VLL S + P K ++L++ F +
Sbjct: 53 --EAFHASILTMELD-GKAEKVLLRSVQWHPYK-------QQVLHVDFQRVLASQAITTK 102
Query: 151 VPVVFKGVESCPGLKKGGYLKS-IRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F+G E P +K G + S I T L+ C ++ I VD+S + + + I+
Sbjct: 103 VPLNFEGGEVSPAVKLSGQVISHILTELEITCLPGNLPASITVDLSGMTANANLHLDSIK 162
Query: 210 VHPSWKLLSKNEKMPLC 226
+ P + N+ PL
Sbjct: 163 L-PLGVTYAGNDTNPLL 178
>gi|380764312|pdb|3TVH|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
Length = 179
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 138 FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
FV +D+ E+ V P+ F G + G++ GG L+ I + +I IEVDVS L
Sbjct: 89 FVLSDEPVEMYV--PLRFVGTPA--GVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGL 144
Query: 198 DIGDRVFMSDIEVHPSWKLLSKNEK 222
+IGD + SD+++ P +L E+
Sbjct: 145 EIGDSLHASDLKLPPGVELAVSPEE 169
>gi|94309233|ref|YP_582443.1| 50S ribosomal protein L25/general stress protein Ctc [Cupriavidus
metallidurans CH34]
gi|166223709|sp|Q1LRQ2.1|RL25_RALME RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|93353085|gb|ABF07174.1| 50S ribosomal protein L25 (General stress protein CTC) [Cupriavidus
metallidurans CH34]
Length = 203
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 81/184 (44%), Gaps = 25/184 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI-HSIL 87
+ A R G+ S R R+ G+ P +++ + +++ + + H++
Sbjct: 3 VVAFERSVQGTGASRRLRNSGKTPGIIYG-----------GAAEPKMIELDHNALWHALK 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K F S+ L++ AG LL + ++ P K +L++ F ++
Sbjct: 52 KEA----FHSSILDLEV-AGKSEKALLRAFQMHPFKP-------LVLHVDFQRVSATEKI 99
Query: 148 KVDVPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
V VP+ F E+ PG+K G G + I L+ C + IEVD++ ++ + +S
Sbjct: 100 HVKVPLHFMNQETAPGVKLGHGIVSHILNDLEVSCLPADLPEFIEVDLAAAELNQTIHLS 159
Query: 207 DIEV 210
D+++
Sbjct: 160 DLKL 163
>gi|340781438|ref|YP_004748045.1| 50S ribosomal protein L25p [Acidithiobacillus caldus SM-1]
gi|340555591|gb|AEK57345.1| LSU ribosomal protein L25p [Acidithiobacillus caldus SM-1]
Length = 209
Score = 44.7 bits (104), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 42/86 (48%)
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIE 191
+L++ F+ G + + VP+ F+ +C G+K GG L + P + I
Sbjct: 89 EVLHVDFLRVHAGERVTLHVPIHFENEATCVGVKSGGVLHRALVEVVVEAPVGQLPEAIV 148
Query: 192 VDVSNLDIGDRVFMSDIEVHPSWKLL 217
VD++ L +G+ + +S I V KL+
Sbjct: 149 VDIAQLQVGESIHLSQIPVPAGVKLV 174
>gi|253999718|ref|YP_003051781.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Methylovorus
glucosetrophus SIP3-4]
gi|313201766|ref|YP_004040424.1| ribosomal 5S rRNA e-loop-binding protein ctc/l25/tl5 [Methylovorus
sp. MP688]
gi|253986397|gb|ACT51254.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylovorus
glucosetrophus SIP3-4]
gi|312441082|gb|ADQ85188.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Methylovorus
sp. MP688]
Length = 205
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 80/187 (42%), Gaps = 31/187 (16%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A+ RE G+ S R R G++P +V+ + K +S E K
Sbjct: 5 ITAVKRENQGTGASRRLRRAGKVPGIVYG-------------ASKDAVSVEFDH-----K 46
Query: 89 SVELPF----FCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
++ L F F ++ L + G V+L ++ P++ I ++ F
Sbjct: 47 ALFLEFRHEAFHASILTLNLD-GKKEQVVLRDYQMHPVR-------NTIQHIDFQRVSAT 98
Query: 145 TELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+L V VP+ F + PG+K GG + I T C + + IEVD++ L+ G +
Sbjct: 99 EKLHVKVPLHFINQDIAPGVKLSGGVVTHILTEADVSCLPKDLPEFIEVDLATLEAGHSI 158
Query: 204 FMSDIEV 210
+S I++
Sbjct: 159 HLSQIKL 165
>gi|322812593|pdb|3PYO|V Chain V, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 50s Subunit Of The First 70s Ribosome.
gi|322812646|pdb|3PYR|V Chain V, Crystal Structure Of A Complex Containing Domain 3 From
The Psiv Igr Ires Rna Bound To The 70s Ribosome. This
File Contains The 50s Subunit Of The Second 70s
Ribosome.
gi|322812699|pdb|3PYT|V Chain V, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 50s Subunit Of The First 70s Ribosome.
gi|322812752|pdb|3PYV|V Chain V, Crystal Structure Of A Complex Containing Domain 3 Of Crpv
Igr Ires Rna Bound To The 70s Ribosome. This File
Contains The 50s Subunit Of The Second 70s Ribosome
Length = 188
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 138 FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
FV +D+ E+ V P+ F G + G++ GG L+ I + +I IEVDVS L
Sbjct: 87 FVLSDEPVEMYV--PLRFVGTPA--GVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGL 142
Query: 198 DIGDRVFMSDIEVHPSWKLLSKNEK 222
+IGD + SD+++ P +L E+
Sbjct: 143 EIGDSLHASDLKLPPGVELAVSPEE 167
>gi|398992795|ref|ZP_10695756.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM21]
gi|398136251|gb|EJM25343.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM21]
Length = 199
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 81/182 (44%), Gaps = 25/182 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ + ++P +L+ E +
Sbjct: 5 TLNAEVRSDLGKGASRRLRRLASLVPAVVYGGE--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G+ +V++ + + R G +L+ FV G +
Sbjct: 51 AKLLENEAAYSHIIELNV-GGTKQNVIIKA-------LQRHPAKGHVLHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F E+ P +KKGG + + ++ C + + IEVD++N ++G + +S
Sbjct: 103 LTAIVPVHFIN-EAAP-VKKGGEISHVVAEIEVTCLPKDLPEFIEVDLANAEVGSIIHLS 160
Query: 207 DI 208
DI
Sbjct: 161 DI 162
>gi|398340260|ref|ZP_10524963.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira
kirschneri serovar Bim str. 1051]
gi|418687257|ref|ZP_13248417.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|418740038|ref|ZP_13296418.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
gi|421087930|ref|ZP_15548760.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri str.
200802841]
gi|421130291|ref|ZP_15590486.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri str.
2008720114]
gi|410003436|gb|EKO53880.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri str.
200802841]
gi|410358393|gb|EKP05561.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri str.
2008720114]
gi|410738306|gb|EKQ83044.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri serovar
Grippotyphosa str. Moskva]
gi|410752624|gb|EKR09597.1| ribosomal protein L25, Ctc-form [Leptospira kirschneri serovar
Valbuzzi str. 200702274]
Length = 212
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 24/191 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I R TG + R R G IP + + + + K++ K +HS
Sbjct: 7 HKIAVKKRTTTGKNENNRLRFSGMIPVNIIGGGVATSG----AVNEKEL----EKMVHSG 58
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
++ ST L + G G+ KV ++ R E RI ++ F G +
Sbjct: 59 IRQ-------STLIELDVE-GQGTQ------KVFVKEIQRFPEIDRIRHVDFYKVVPGQK 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ + + GV G K GG + I ++ E + + +DV++LD+GD + +S
Sbjct: 105 IVTKIGIETTGV--AKGSKTGGQFEHIIHEIRVKTIPEDLLENLTIDVTDLDVGDSIKIS 162
Query: 207 DIEVHPSWKLL 217
++V SW++L
Sbjct: 163 QLKVPASWEIL 173
>gi|315223765|ref|ZP_07865615.1| 50S ribosomal protein L25 [Capnocytophaga ochracea F0287]
gi|420158472|ref|ZP_14665289.1| ribosomal protein L25, Ctc-form [Capnocytophaga ochracea str. Holt
25]
gi|314946340|gb|EFS98339.1| 50S ribosomal protein L25 [Capnocytophaga ochracea F0287]
gi|394763588|gb|EJF45669.1| ribosomal protein L25, Ctc-form [Capnocytophaga ochracea str. Holt
25]
Length = 199
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSP---SRKQILSTERKQIH 84
TI+ RE G S R+ G++P V++ D N S + K I+ T
Sbjct: 5 TIKGSQRESVGKAASKALRNAGQVPCVLYGGD----NVLHFSAPELAFKNIVYTPN---- 56
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
T +++ + +++L D + D + +I+++ F
Sbjct: 57 ------------VYTAAIELNGKTYNAILQD--------IQFDPVSDKIIHIDFYQLQKD 96
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
E+ ++VP+ +G + PG+ GG L+ + LK +++ + VD+S L++G++++
Sbjct: 97 KEITIEVPIQIEG--TSPGIMAGGTLRIVNRKLKVKALPDNLPDFVPVDISGLEMGNKLY 154
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISATK 232
++ + +K++ + + +C++ ++
Sbjct: 155 VTKL-AQDKYKIMHPDNTV-VCQVRVSR 180
>gi|85713257|ref|ZP_01044282.1| Ribosomal protein L25 [Idiomarina baltica OS145]
gi|85692926|gb|EAQ30899.1| Ribosomal protein L25 [Idiomarina baltica OS145]
Length = 220
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 92/215 (42%), Gaps = 27/215 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
I+A R G S R R ++PA+++ L + +++++
Sbjct: 7 NIKATVRTDKGKGASRRLRHADKVPAILYG-----------GKDEPIALELDHNKVNNM- 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ F S L+I ++L D + R ++ +L F + G +L
Sbjct: 55 --ADYEAFYSHILTLEIDGKKHQAILKD--------MQRHPYKPKLTHLDFQRVEKGHKL 104
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
VP+ F E+ G+K +GG + ++ + + + +EVD++NL +GD + ++
Sbjct: 105 HTHVPLHFLNEETAKGVKDEGGVVVHHVNDVEIMVLPKDLPEYLEVDIANLSVGDTIHLT 164
Query: 207 DIEVHPSWKL--LSKNE--KMPLCKISATKLENPE 237
D+ + +L L+K E + I+A ++E E
Sbjct: 165 DLNLPEGVELVELTKGEDHDQAVVSITAPRVEKEE 199
>gi|380764231|pdb|3TVE|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Leu Complex
Length = 175
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 138 FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
FV +D+ E+ V P+ F G + G++ GG L+ I + +I IEVDVS L
Sbjct: 89 FVLSDEPVEMYV--PLRFVGTPA--GVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGL 144
Query: 198 DIGDRVFMSDIEVHPSWKLLSKNEK 222
+IGD + SD+++ P +L E+
Sbjct: 145 EIGDSLHASDLKLPPGVELAVSPEE 169
>gi|386021940|ref|YP_005939965.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri DSM 4166]
gi|327481913|gb|AEA85223.1| 50S ribosomal protein L25/general stress protein Ctc [Pseudomonas
stutzeri DSM 4166]
Length = 205
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 97/210 (46%), Gaps = 26/210 (12%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R+ +PAV++ D ++P IL+ K + +
Sbjct: 5 TLNAQVRSDLGKGASRRLRRNAALVPAVIYGGD--------KAPQSISILA---KDLAKL 53
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
L++ E F S + + G SVL+ + + P K +L+ FV G +
Sbjct: 54 LEN-EASF--SHVLSMNVD-GQTESVLIKALQRHPAK-------SFVLHADFVRVVAGHK 102
Query: 147 LKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L VP+ F E+ G+K+ GG + ++ C + + IEVD++N+++G + M
Sbjct: 103 LTATVPLHFINQETSVGVKQQGGEILHNLNEVEVSCLPQDLPEFIEVDMANVEVGQVLHM 162
Query: 206 SDIEVHPSWKL--LSKNEKMPLCKISATKL 233
+DI++ +L L+ +P+ + A ++
Sbjct: 163 TDIKLPKGVELVSLAHGSDLPVANVHAPRV 192
>gi|329943160|ref|ZP_08291934.1| ribosomal protein L25, Ctc-form [Chlamydophila psittaci Cal10]
gi|332287742|ref|YP_004422643.1| 50S ribosomal protein L25, Ctc-form [Chlamydophila psittaci 6BC]
gi|384450902|ref|YP_005663502.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila
psittaci 6BC]
gi|384451895|ref|YP_005664493.1| 50S ribosomal protein L25 [Chlamydophila psittaci 01DC11]
gi|384452869|ref|YP_005665466.1| 50S ribosomal protein L25 [Chlamydophila psittaci 08DC60]
gi|384453848|ref|YP_005666444.1| 50S ribosomal protein L25 [Chlamydophila psittaci C19/98]
gi|384454827|ref|YP_005667422.1| 50S ribosomal protein L25 [Chlamydophila psittaci 02DC15]
gi|392376970|ref|YP_004064748.1| putative 50S ribosomal protein L25 [Chlamydophila psittaci RD1]
gi|406592709|ref|YP_006739889.1| 50S ribosomal protein L25 [Chlamydia psittaci CP3]
gi|406593768|ref|YP_006740947.1| 50S ribosomal protein L25 [Chlamydia psittaci NJ1]
gi|406594451|ref|YP_006741983.1| 50S ribosomal protein L25 [Chlamydia psittaci MN]
gi|407454383|ref|YP_006733491.1| 50S ribosomal protein L25 [Chlamydia psittaci 84/55]
gi|407457070|ref|YP_006735643.1| 50S ribosomal protein L25 [Chlamydia psittaci VS225]
gi|407459639|ref|YP_006737742.1| 50S ribosomal protein L25 [Chlamydia psittaci M56]
gi|407461007|ref|YP_006738782.1| 50S ribosomal protein L25 [Chlamydia psittaci WC]
gi|410858753|ref|YP_006974693.1| putative 50S ribosomal protein L25 [Chlamydia psittaci 01DC12]
gi|313848313|emb|CBY17316.1| putative 50S ribosomal protein L25 [Chlamydophila psittaci RD1]
gi|325506971|gb|ADZ18609.1| 50S ribosomal protein L25, Ctc-form [Chlamydophila psittaci 6BC]
gi|328814707|gb|EGF84697.1| ribosomal protein L25, Ctc-form [Chlamydophila psittaci Cal10]
gi|328914996|gb|AEB55829.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Chlamydophila
psittaci 6BC]
gi|334692629|gb|AEG85848.1| 50S ribosomal protein L25, Ctc-form [Chlamydophila psittaci C19/98]
gi|334693605|gb|AEG86823.1| 50S ribosomal protein L25, Ctc-form [Chlamydophila psittaci 01DC11]
gi|334694584|gb|AEG87801.1| 50S ribosomal protein L25, Ctc-form [Chlamydophila psittaci 02DC15]
gi|334695558|gb|AEG88774.1| 50S ribosomal protein L25, Ctc-form [Chlamydophila psittaci 08DC60]
gi|405781142|gb|AFS19892.1| ribosomal protein L25, Ctc-form [Chlamydia psittaci 84/55]
gi|405782883|gb|AFS21631.1| ribosomal protein L25, Ctc-form [Chlamydia psittaci MN]
gi|405784331|gb|AFS23078.1| ribosomal protein L25, Ctc-form [Chlamydia psittaci VS225]
gi|405785942|gb|AFS24687.1| ribosomal protein L25, Ctc-form [Chlamydia psittaci M56]
gi|405787606|gb|AFS26350.1| ribosomal protein L25, Ctc-form [Chlamydia psittaci WC]
gi|405788581|gb|AFS27324.1| ribosomal protein L25, Ctc-form [Chlamydia psittaci CP3]
gi|405789640|gb|AFS28382.1| ribosomal protein L25, Ctc-form [Chlamydia psittaci NJ1]
gi|410811648|emb|CCO02302.1| putative 50S ribosomal protein L25 [Chlamydia psittaci 01DC12]
Length = 185
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSILKSVE 91
RE + + R G IPAV+++ + L + D S+ L S+E
Sbjct: 8 RETDKKSLLKKIRQTGGIPAVIYSGGKSLANIVVDAHVFSK-------------FLSSLE 54
Query: 92 LPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDV 151
ST F L + +++ D + + ++++L F + ++K+++
Sbjct: 55 SGALSSTIFSLSYEGRTIKALVKD--------IQYQVTSYKVIHLDFEELIEDRDVKLNI 106
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
P+ C G+K GG L+ + +L+ +C + I P +E+DV +L + +SDI++
Sbjct: 107 PIRCINAVDCVGVKLGGSLRQVIRALRVVCKPKDIVPYLELDVRSLGLSQTRKLSDIQL 165
>gi|441161198|ref|ZP_20967907.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces
rimosus subsp. rimosus ATCC 10970]
gi|440616782|gb|ELQ79908.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces
rimosus subsp. rimosus ATCC 10970]
Length = 194
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 86/191 (45%), Gaps = 30/191 (15%)
Query: 38 GSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCS 97
G + R R + +P V++ +P I + H+++ +++ P +
Sbjct: 15 GKGAARRSRRENMVPGVIYGHG--------DAPKHVAIHN------HALMMALKTP---N 57
Query: 98 TTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKG 157
L++ G S+L V+P V R+ G ++++ F+ G ++ V+VP+ +G
Sbjct: 58 ALIRLEM---DGESML-----VIPKAVQREAIRGFLVHVDFLAVRKGEKVTVEVPIHTEG 109
Query: 158 VESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLL 217
+ PG L+ + +L A HI + V V+ LD GD V D+ + PS L
Sbjct: 110 -DLAPG---ANLLEHLLNTLPLEAEATHIPESVTVSVAGLDAGDSVHAKDVTL-PSGSTL 164
Query: 218 SKNEKMPLCKI 228
+ +E+ L ++
Sbjct: 165 AIDEETVLLQV 175
>gi|402830700|ref|ZP_10879396.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. CM59]
gi|402283900|gb|EJU32407.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. CM59]
Length = 198
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/205 (20%), Positives = 93/205 (45%), Gaps = 29/205 (14%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI RE G S R+ G++P V++ + NT S +
Sbjct: 5 TIVGSQRESVGKAASKALRNAGKVPCVLYGGE----NTIHFSADSL-----------AFK 49
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K V P + T +++ + +++L D + D T +IL++ F E+
Sbjct: 50 KLVYTPNVYTAT--IELGGKTYTAILQD--------IQFDPVTDKILHVDFYQLHKDKEI 99
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
++VP+ G + PG+ GG L+ + LK +++ + VD+S +++G+R +++
Sbjct: 100 TLEVPIQIVG--TAPGVMAGGTLRIVNRKLKVKALPDNLPDFVPVDISWMEMGNRFYVTK 157
Query: 208 IEVHPSWKLLSKNEKMPLCKISATK 232
I ++K++ + + +C++ ++
Sbjct: 158 I-AQENYKIMHPDNTV-VCQVRVSR 180
>gi|389795955|ref|ZP_10199061.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
fulvus Jip2]
gi|388430005|gb|EIL87219.1| 50S ribosomal protein L25/general stress protein Ctc [Rhodanobacter
fulvus Jip2]
Length = 227
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 84/183 (45%), Gaps = 23/183 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I+A R+ G S R R +PAVV+ D ++P QI + ++IL
Sbjct: 7 IKAQSRKDEGKGASRRLRRAAYVPAVVYGGD--------QAPESIQI------EHNTILL 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ + F S+ L + G VL+ + P K ++++ F+ D+ +L+
Sbjct: 53 AAKNESFFSSVLDLNVD-GKVQKVLVRDWQKHPFK-------QLMMHMDFLRIDENAKLR 104
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIR-TSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+VP+ F E+ P K G + S T ++ C + + IE+D+ ++ GD + +S
Sbjct: 105 ANVPLHFLNQETSPAGKMSGVVISHNLTEVEVSCLPKDLPAFIELDLGAVEAGDIIHLSQ 164
Query: 208 IEV 210
+++
Sbjct: 165 LKL 167
>gi|406979974|gb|EKE01656.1| hypothetical protein ACD_21C00082G0006 [uncultured bacterium]
Length = 242
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKI 190
RIL++ ++ + +P+ F G E PG+K GG + + + ++ C + + I
Sbjct: 88 RILHIDLQRISATEKIAMRIPLHFTGAELAPGVKLSGGLISRLMSDIEVRCFPKDLPEFI 147
Query: 191 EVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
EVD+S L+I + +SD+++ P ++++
Sbjct: 148 EVDLSTLEINQTIHLSDLKLAPGIEIVA 175
>gi|238020516|ref|ZP_04600942.1| hypothetical protein GCWU000324_00398 [Kingella oralis ATCC 51147]
gi|237867496|gb|EEP68502.1| hypothetical protein GCWU000324_00398 [Kingella oralis ATCC 51147]
Length = 190
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 80/181 (44%), Gaps = 24/181 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
IQA RE G+ S R R +G +PAVV+ Q ++ + KQ +
Sbjct: 5 IQATVRETQGTGASRRLRKEGLVPAVVYG------------VGEAQAIAVDHKQ---MFY 49
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
++E F + L I G V++ ++ P+K ++ ++ F + L+
Sbjct: 50 ALEKESFFTQLLKLNIN-GKEQDVIVRDYQMHPVK-------RQVQHIDFQAVNVNEPLR 101
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+ +PV E +K + G + + T + + ++I IE+D N++ GD + +SD
Sbjct: 102 MRIPVHVVNAEKSKAVKLQSGRVALLTTVVDVIVDPKNIPAAIELDCENVEAGDILHLSD 161
Query: 208 I 208
+
Sbjct: 162 L 162
>gi|429757161|ref|ZP_19289713.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 324
str. F0483]
gi|429169329|gb|EKY11087.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 324
str. F0483]
Length = 199
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSP---SRKQILSTERKQIH 84
TI+ RE G S R+ G++P V++ D N S + K I+ T
Sbjct: 5 TIKGSQRESVGKAASKALRNAGQVPCVLYGGD----NVLHFSAPELAFKNIVYTPN---- 56
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
T +++ + +++L D + D + +I+++ F
Sbjct: 57 ------------VYTAAIELNGKTYNAILQD--------IQFDPVSDKIIHIDFYQLHKD 96
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
E+ ++VP+ +G + PG+ GG L+ + LK +++ + VD+S L++G++++
Sbjct: 97 KEITIEVPIQIEG--TSPGIMAGGTLRIVNRKLKVKALPDNLPDFVPVDISGLEMGNKLY 154
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISATK 232
++ + +K++ + + +C++ ++
Sbjct: 155 VTKL-AQDKYKIMHPDNTV-VCQVRVSR 180
>gi|347541314|ref|YP_004848740.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudogulbenkiania sp. NH8B]
gi|345644493|dbj|BAK78326.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Pseudogulbenkiania sp. NH8B]
Length = 192
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 79/181 (43%), Gaps = 23/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A RE G+ S R R G++PAVV+ NT+ S + E ++ LK
Sbjct: 7 AAKREQLGTSASRRLRHAGKLPAVVYG-----ANTEAVS------VVLEHNPVYYALKE- 54
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F + L I G +VLL ++ P K +L++ F D ++ V
Sbjct: 55 --EGFHTGILNLVID-GEKQAVLLRDYQMHPYK-------QLVLHMDFQRVDLNEKMHVK 104
Query: 151 VPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F G ++ +K +G + + T + + IEVD+S + G + +SD++
Sbjct: 105 VPLHFVGADASEAVKLQGAKISHVLTEVDVRALPAQLPSFIEVDLSAIQAGQTIHLSDLK 164
Query: 210 V 210
+
Sbjct: 165 L 165
>gi|325110027|ref|YP_004271095.1| 50S ribosomal protein L25 [Planctomyces brasiliensis DSM 5305]
gi|324970295|gb|ADY61073.1| 50S ribosomal protein L25 [Planctomyces brasiliensis DSM 5305]
Length = 211
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 79/180 (43%), Gaps = 27/180 (15%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ + R R++GR P ++ + ++ + + + I+++ K +
Sbjct: 9 AAERNEVGTNATKRLRNEGRTPGTLYGHNEGTRHFAVEAEALQPIIASGHKVVD------ 62
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
L+I + +++ D V D + +L+ + ++ + D
Sbjct: 63 -----------LEIGGATEKTMIQD--------VQWDTFSQYVLHFDLLRVNEKERVTTD 103
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
V +V +G+ PG+ GG L+ + SL CP + ++ + ++ L IGD + + D+E+
Sbjct: 104 VELVTRGI--APGVLAGGILELVHHSLPIECPVIRLPEQVTLRINKLQIGDSITVGDLEL 161
>gi|256820643|ref|YP_003141922.1| 50S ribosomal protein L25/general stress protein Ctc
[Capnocytophaga ochracea DSM 7271]
gi|429747538|ref|ZP_19280800.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|256582226|gb|ACU93361.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5
[Capnocytophaga ochracea DSM 7271]
gi|429162942|gb|EKY05214.1| ribosomal protein L25, Ctc-form [Capnocytophaga sp. oral taxon 380
str. F0488]
Length = 199
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 40/208 (19%), Positives = 94/208 (45%), Gaps = 35/208 (16%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSP---SRKQILSTERKQIH 84
TI+ RE G S R+ G++P V++ D N S + K I+ T
Sbjct: 5 TIKGSQRESVGKAASKALRNAGQVPCVLYGGD----NVLHFSAPELAFKNIVYTPN---- 56
Query: 85 SILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDG 144
T +++ + +++L D + D + +I+++ F
Sbjct: 57 ------------VYTAAIELNGKTYNAILQD--------IQFDPVSDKIIHIDFYQLHKD 96
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
E+ ++VP+ +G + PG+ GG L+ + LK +++ + VD+S L++G++++
Sbjct: 97 KEITIEVPIQIEG--TSPGIMAGGTLRIVNRKLKVKALPDNLPDFVPVDISGLEMGNKLY 154
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISATK 232
++ + +K++ + + +C++ ++
Sbjct: 155 VTKL-AQDKYKIMHPDNTV-VCQVRVSR 180
>gi|152990133|ref|YP_001355855.1| 50S ribosomal protein L25/general stress protein Ctc [Nitratiruptor
sp. SB155-2]
gi|166223697|sp|A6Q1Y9.1|RL25_NITSB RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|151421994|dbj|BAF69498.1| 50S ribosomal protein L25 [Nitratiruptor sp. SB155-2]
Length = 178
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 80/189 (42%), Gaps = 40/189 (21%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++ I RE TG + + R G + A ++ +D IH+ K
Sbjct: 2 LEGIVRESTGKKATKALRRDGYLIANIYGKDF--------------------PNIHAAFK 41
Query: 89 SVELPFFCST-------TFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWA 141
+ F T FP+++ G L +V+ + +D T +L++ + A
Sbjct: 42 KGD---FIRTVRHKEKLAFPVKV----GDKEL----EVVVQEYQKDPVTYDLLHVDLMVA 90
Query: 142 DDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
G VP+ K V + GLK G L + + +K E+I I +DVSNLD+GD
Sbjct: 91 QPGVVTYYMVPI--KTVGTPIGLKNKGVLVTSKRRIKVKGAIENIPDSITLDVSNLDVGD 148
Query: 202 RVFMSDIEV 210
+ + DIE+
Sbjct: 149 AILIRDIEL 157
>gi|336453350|ref|YP_004607816.1| 50S ribosomal protein L25 [Helicobacter bizzozeronii CIII-1]
gi|335333377|emb|CCB80104.1| LSU ribosomal protein L25p [Helicobacter bizzozeronii CIII-1]
Length = 178
Score = 44.3 bits (103), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 54/117 (46%), Gaps = 18/117 (15%)
Query: 125 HRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAE 184
+D T ++++ + G + K +PV GV GLK G L + ++ C E
Sbjct: 74 QKDPVTNALVHVDLLVLQKGVKTKFHIPVKVHGVPV--GLKNKGILMISKERVQVECVPE 131
Query: 185 HISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLENPEPAVM 241
H+ EVDV+ LD+GD + + D+++ P+ A LENP AV+
Sbjct: 132 HLFSSFEVDVAALDVGDAILVRDLKI-PT---------------QAHILENPNNAVV 172
>gi|84500224|ref|ZP_00998490.1| ribosomal protein L25 [Oceanicola batsensis HTCC2597]
gi|84392158|gb|EAQ04426.1| ribosomal protein L25 [Oceanicola batsensis HTCC2597]
Length = 188
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%)
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
+ + + +PV F ++ PG+K+GG L +R ++ A I KI VD++ L+IGD V
Sbjct: 75 SRVNLHIPVEFINEDAAPGIKRGGVLTVVRADVELNVLAGDIPEKIVVDLTGLEIGDTVT 134
Query: 205 MS 206
+S
Sbjct: 135 IS 136
>gi|440781738|ref|ZP_20959966.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
pasteurianum DSM 525]
gi|440220456|gb|ELP59663.1| 50S ribosomal protein L25/general stress protein Ctc [Clostridium
pasteurianum DSM 525]
Length = 210
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 2/68 (2%)
Query: 150 DVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
+VP+ F G + K GG L+ + S+K C A+++ I+VDVSNL GD + ++DIE
Sbjct: 102 EVPLNFNGESNIR--KFGGILQKSKDSVKIRCQADNLPKSIDVDVSNLSFGDTLRIADIE 159
Query: 210 VHPSWKLL 217
++
Sbjct: 160 ASSEISII 167
>gi|429463183|ref|YP_007184646.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
gi|429338697|gb|AFZ83120.1| large subunit ribosomal protein L25 [Candidatus
Kinetoplastibacterium crithidii (ex Angomonas deanei
ATCC 30255)]
Length = 141
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 1/78 (1%)
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGG-YLKSIRTSLKYLCPAEHISPKI 190
++L++ F + VP+ F E+ P +K GG + + T L+ C + P I
Sbjct: 25 QVLHVDFQRVSANQNINTKVPLHFLNAETSPAVKLGGAIINHVITELEISCLPAVLPPFI 84
Query: 191 EVDVSNLDIGDRVFMSDI 208
E+D+SN+++G+ + SDI
Sbjct: 85 EIDLSNIELGNSIHFSDI 102
>gi|410940747|ref|ZP_11372548.1| ribosomal protein L25, Ctc-form [Leptospira noguchii str.
2006001870]
gi|410784073|gb|EKR73063.1| ribosomal protein L25, Ctc-form [Leptospira noguchii str.
2006001870]
Length = 212
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 82/191 (42%), Gaps = 24/191 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I R TG + R R G +P + + + + K++ +K +HS
Sbjct: 7 HKIAVKKRTTTGKNENNRLRFSGMVPVNIIGGGVATSG----AVNEKEL----QKMVHSG 58
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
++ ST L + G G+ KV ++ R E RI ++ F G +
Sbjct: 59 IRQ-------STLIELDVE-GQGAQ------KVFVKEIQRFPEIDRIRHVDFYKVVPGQK 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ + + GV G K GG + I ++ E + + +DV++LD+GD + +S
Sbjct: 105 IVTKIGIETTGV--AKGSKTGGQFEHIIHEIRVKTIPEDLIENLTIDVTDLDVGDSIKIS 162
Query: 207 DIEVHPSWKLL 217
++V SW++L
Sbjct: 163 QLKVPASWEIL 173
>gi|291453574|ref|ZP_06592964.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces
albus J1074]
gi|291356523|gb|EFE83425.1| 50S ribosomal protein L25/general stress protein Ctc [Streptomyces
albus J1074]
Length = 196
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 76/182 (41%), Gaps = 29/182 (15%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A R G + R R + ++P VV+ P+ H +L
Sbjct: 6 ISAETRSEFGKGAARRIRRESKVPGVVYGHG--------AEPA------------HIVLP 45
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
EL T+ L G S L V+P V RD G ++++ + G +++
Sbjct: 46 GHELMMALKTSNVLISLDLGGKSEL-----VIPKAVQRDALKGHLVHIDLLTVKRGEKVQ 100
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V++PVV +G + PG L+ + ++L A +I + V V+ LD GD V DI
Sbjct: 101 VEIPVVAEG-DLAPG---ANLLEHVLSALPVEAEATNIPESLTVSVAGLDAGDSVLAKDI 156
Query: 209 EV 210
++
Sbjct: 157 KL 158
>gi|226226624|ref|YP_002760730.1| 50S ribosomal protein L25 [Gemmatimonas aurantiaca T-27]
gi|226089815|dbj|BAH38260.1| 50S ribosomal protein L25 [Gemmatimonas aurantiaca T-27]
Length = 208
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 81/190 (42%), Gaps = 23/190 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R TG + + R G IP+V++ R P Q L+T ++ ++
Sbjct: 5 TLDATARVETGKGAARKIRQAGNIPSVIYGHG--------REP---QSLTTNARETERLI 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
KS+ + ST L I + +++ + + R IL++ F G +
Sbjct: 54 KSIAV---SSTVIELNIDGKTARTLIRE--------IQRHPFKRSILHIDFQELVAGETV 102
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V P+V+ G L+ GG L I L I I+VD+S + +G + ++D
Sbjct: 103 SVKCPIVYIGTPEGVRLE-GGILDQIMHELHIQVDPASIPNHIDVDISGVKLGKSLHVAD 161
Query: 208 IEVHPSWKLL 217
+++ K+L
Sbjct: 162 LKLPAGIKVL 171
>gi|62297563|sp|P56930.3|RL25_THETH RecName: Full=50S ribosomal protein L25; Short=TL5
gi|14719583|pdb|1FEU|A Chain A, Crystal Structure Of Ribosomal Protein Tl5, One Of The Ctc
Family Proteins, Complexed With A Fragment Of 5s Rrna.
gi|14719586|pdb|1FEU|D Chain D, Crystal Structure Of Ribosomal Protein Tl5, One Of The Ctc
Family Proteins, Complexed With A Fragment Of 5s Rrna.
gi|5640135|emb|CAA64209.1| ribosomal protein TL5 [Thermus thermophilus]
Length = 206
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 138 FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
FV +D+ E+ V P+ F G + G++ GG L+ I + +I IEVDVS L
Sbjct: 89 FVLSDEPVEMYV--PLRFVGTPA--GVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGL 144
Query: 198 DIGDRVFMSDIEVHPSWKL 216
+IGD + SD+++ P +L
Sbjct: 145 EIGDSLHASDLKLPPGVEL 163
>gi|381191053|ref|ZP_09898565.1| 50S ribosomal protein L25/general stress protein Ctc [Thermus sp.
RL]
gi|380451142|gb|EIA38754.1| 50S ribosomal protein L25/general stress protein Ctc [Thermus sp.
RL]
Length = 206
Score = 44.3 bits (103), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 138 FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
FV +D+ E+ V P+ F G + G++ GG L+ I + +I IEVDVS L
Sbjct: 89 FVLSDEPVEMYV--PLRFVGTPA--GVRXGGVLQEIHRDILVKVSPRNIPEFIEVDVSGL 144
Query: 198 DIGDRVFMSDIEVHPSWKL 216
+IGD + SD+++ P +L
Sbjct: 145 EIGDSLHASDLKLPPGVEL 163
>gi|413963739|ref|ZP_11402966.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
sp. SJ98]
gi|413929571|gb|EKS68859.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
sp. SJ98]
Length = 205
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 25/182 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI-HSIL 87
+ A R G+ S R R+ G+ P +V+ + TD Q++ + + H++
Sbjct: 3 VVAFERSKQGTGASRRLRNSGKTPGIVYGGE-----TDV------QLVELDHNALWHALK 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K V F S+ L++ AG VLL + P K +L++ F D +L
Sbjct: 52 KEV----FHSSILDLEV-AGKSQQVLLRDVQYHPFK-------QLVLHVDFQRVDAKKKL 99
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
VP+ F E+ P +K G + + T L+ C + +E+D++ ++ G +
Sbjct: 100 HTKVPLHFMNQETNPAVKLSGAVISHVVTELEVECLPADLPEFLEIDLAKIEAGQTMHAK 159
Query: 207 DI 208
DI
Sbjct: 160 DI 161
>gi|330811725|ref|YP_004356187.1| 50S ribosomal protein L25 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|423699280|ref|ZP_17673770.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens Q8r1-96]
gi|327379833|gb|AEA71183.1| 50S ribosomal protein L25 [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|387996363|gb|EIK57693.1| ribosomal protein L25, Ctc-form [Pseudomonas fluorescens Q8r1-96]
Length = 200
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 84/182 (46%), Gaps = 25/182 (13%)
Query: 28 TIQAIPRECTGSRVSARDRSQGR-IPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ + ++P +L+ E +
Sbjct: 5 TLNAEVRSDLGKGASRRLRRLASLVPAVVYGGE--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L I G+ +V++ + + P K G +++ FV G +
Sbjct: 51 AKLLENEAAYSHIIELNI-GGTKQNVVIKALQRHPAK-------GHVMHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F G E+ P +KKGG + + + ++ C + + IEVD+++ ++G + +S
Sbjct: 103 LTAIVPVHFVG-EAAP-IKKGGEISHVVSEIEVTCLPKDLPEFIEVDLADAEVGTIIHLS 160
Query: 207 DI 208
D+
Sbjct: 161 DL 162
>gi|322420138|ref|YP_004199361.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Geobacter sp.
M18]
gi|320126525|gb|ADW14085.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter sp.
M18]
Length = 195
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 86/203 (42%), Gaps = 31/203 (15%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTE--RKQIHSILKSVE 91
R+ TG + R R+ GR+PAVV+ + + + + ++ E R I ++ + E
Sbjct: 11 RKETGKGICRRLRAAGRVPAVVYGKGMEPVSISLVQKELSEAIAGEGGRNHILTLKGAGE 70
Query: 92 LPFFCSTTFPLQIRAGSGSSVLLDSGKVLP--IKVHRDEETGRILNLVFVWADDGTELKV 149
L + +L DS K P + +H+ +NL AD KV
Sbjct: 71 LEGANVIV----------ADLLRDSLKNQPRHVDLHK-------INL----AD-----KV 104
Query: 150 DVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
V V V + G+K GG+L ++ C HI I V+V+ L IG V +SDI
Sbjct: 105 KVHVKLNLVGTPAGVKAGGFLDFAMHEVEVECLPVHIPAHINVEVAELTIGHSVHVSDI- 163
Query: 210 VHPSWKLLSKNEKMPLCKISATK 232
V P + + K P+ I K
Sbjct: 164 VAPVGTTIVSDPKAPVVSILGRK 186
>gi|398348697|ref|ZP_10533400.1| 50S ribosomal protein L25/general stress protein Ctc [Leptospira
broomii str. 5399]
Length = 209
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 84/191 (43%), Gaps = 24/191 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
H I R TG V+ R R+ G +P + + + K++ K +HS
Sbjct: 3 HKITVKKRTETGKNVNNRLRASGMVPINIIGSG----KASSGAVNEKEL----DKLVHSG 54
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
++ ST L++ G G+ KV ++ R E RI ++ F + G +
Sbjct: 55 IRQ-------STLIDLEVE-GEGTH------KVYVKEIQRFPEIDRIRHVDFYKVEPGKK 100
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ + V +G+ G K GG + ++ E + + +DVS+LD+GD + +S
Sbjct: 101 IITKIGVRTEGL--AKGSKMGGQFDHLIHEIRVKTIPEDLLESLVIDVSDLDVGDSIKVS 158
Query: 207 DIEVHPSWKLL 217
++V SW++L
Sbjct: 159 QLKVPASWEIL 169
>gi|310815223|ref|YP_003963187.1| 50S ribosomal protein L25 [Ketogulonicigenium vulgare Y25]
gi|385232765|ref|YP_005794107.1| 50S ribosomal protein L25 [Ketogulonicigenium vulgare WSH-001]
gi|308753958|gb|ADO41887.1| 50S ribosomal protein L25/general stress protein Ctc
[Ketogulonicigenium vulgare Y25]
gi|343461676|gb|AEM40111.1| 50S ribosomal protein L25 [Ketogulonicigenium vulgare WSH-001]
Length = 155
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
T +K+ +PV F+ + PG+K GG + +R+ ++ A I + VD++ IGD +
Sbjct: 57 TRVKLHIPVHFENEAAAPGVKLGGTVVHVRSEIELEVTANDIPEFVTVDLTGRKIGDVIH 116
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISA 230
+ D+ + P + + + + ISA
Sbjct: 117 IQDVTL-PKGAVPTTDRNFAIANISA 141
>gi|302390885|ref|YP_003826705.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetohalobium
arabaticum DSM 5501]
gi|302202962|gb|ADL11640.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Acetohalobium
arabaticum DSM 5501]
Length = 224
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/198 (20%), Positives = 88/198 (44%), Gaps = 28/198 (14%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R+ TG+ + R R QG +P VV+ ++ + P ++ +TE +
Sbjct: 11 RDETGTGSARRLREQGLVPGVVYGRN--------QEPINLKLDATELADVTG-------- 54
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+ LQ+ + ++ D V +D T L++ F + V+VP+
Sbjct: 55 --GNAIIDLQVDGEEKTVMVKD--------VQKDVITDEYLHVDFHQIALDEPIVVEVPI 104
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
+GV G+K+GG L+ ++ C I +++++S L++G+ + + D+E
Sbjct: 105 SLEGV--AEGVKEGGVLQKTLRKVEVQCLPTEIPSDLKLNISELEVGESLHVGDLEAGEG 162
Query: 214 WKLLSKNEKMPLCKISAT 231
+L + +++ + ++ T
Sbjct: 163 IELTTSGDEVVVTVVAPT 180
>gi|126653926|ref|ZP_01725770.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp.
B14905]
gi|126589586|gb|EAZ83726.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus sp.
B14905]
Length = 211
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 131 GRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKI 190
G I ++ F + EL+V++PV G G+ GG+L ++ I I
Sbjct: 84 GNIKHVDFKSINMSEELEVEIPVTVTG--DAIGVADGGFLLQPNREVRIKVKPTEIPETI 141
Query: 191 EVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISATKLEN 235
E+DV+N+ IG +++ DI S+++L +++ L I+ EN
Sbjct: 142 EIDVTNVAIGTSLYVGDIRQQFSFEILQEDD-YTLVTITPPSAEN 185
>gi|189425650|ref|YP_001952827.1| 50S ribosomal protein L25/general stress protein Ctc [Geobacter
lovleyi SZ]
gi|226736326|sp|B3E6G0.1|RL25_GEOLS RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|189421909|gb|ACD96307.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Geobacter
lovleyi SZ]
Length = 194
Score = 44.3 bits (103), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 88/197 (44%), Gaps = 27/197 (13%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R TG +S + R+ GRIP +V+ + + +S E K +++ +
Sbjct: 11 RSSTGKGISRKLRAAGRIPGIVYGRGM-----------EPVAISLEPKALNAAIAG---E 56
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRD--EETGRILNLVFVWADDGTELKVDV 151
+ L+ G G LD V+ ++ RD + T ++L V + +++V+V
Sbjct: 57 GGLNNLITLE---GGGD---LDKVVVIVAEIQRDALKRTPEHVDLHRVNMSE--KVRVNV 108
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
PV G + G+K+GG L SL C I IE+++++L IG + +S+I
Sbjct: 109 PVSLVG--TAAGVKEGGLLDFAHHSLHIECLPGQIPEHIEINIADLKIGHAIHVSEISFP 166
Query: 212 PSWKLLSKNEKMPLCKI 228
K + N K P+ +
Sbjct: 167 AGVKCID-NPKTPVVGV 182
>gi|46199527|ref|YP_005194.1| 50S ribosomal protein L25 [Thermus thermophilus HB27]
gi|55981558|ref|YP_144855.1| 50S ribosomal protein L25 [Thermus thermophilus HB8]
gi|384431772|ref|YP_005641132.1| 50S ribosomal protein L25 [Thermus thermophilus SG0.5JP17-16]
gi|386359906|ref|YP_006058151.1| 50S ribosomal protein L25 [Thermus thermophilus JL-18]
gi|62287407|sp|Q5SHZ1.1|RL25_THET8 RecName: Full=50S ribosomal protein L25; Short=TL5
gi|71153670|sp|Q72IA7.1|RL25_THET2 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|116668257|pdb|2J01|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 2 Of 4).
This File Contains The 50s Subunit From Molecule I.
gi|116668318|pdb|2J03|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Mrna, Trna And Paromomycin (Part 4 Of 4).
This File Contains The 50s Subunit From Molecule Ii.
gi|119389755|pdb|2HGJ|Y Chain Y, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
Showing How The 16s 3'-End Mimicks Mrna E And P Codons.
This Entry 2hgj Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgi.
gi|119389812|pdb|2HGQ|Y Chain Y, Crystal Structure Of The 70s Thermus Thermophilus Ribosome
With Translocated And Rotated Shine-Dalgarno Duplex.
This Entry 2hgq Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 2hgp.
gi|119389868|pdb|2HGU|Y Chain Y, 70s T.Th. Ribosome Functional Complex With Mrna And E- And
P-Site Trnas At 4.5a. This Entry 2hgu Contains 50s
Ribosomal Subunit. The 30s Ribosomal Subunit Can Be
Found In Pdb Entry 2hgr.
gi|149240905|pdb|1VSA|T Chain T, Crystal Structure Of A 70s Ribosome-Trna Complex Reveals
Functional Interactions And Rearrangements. This File,
1vsa, Contains The 50s Ribosome Subunit. 30s Ribosome
Subunit Is In The File 2ow8
gi|157836540|pdb|2V47|Z Chain Z, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 2 Of 4). This File Contains The 50s
Subunit For Molecule 1.
gi|157836596|pdb|2V49|Z Chain Z, Structure Of The Ribosome Recycling Factor Bound To The
Thermus Thermophilus 70s Ribosome With Mrna, Asl-Phe And
Trna-Fmet (Part 4 Of 4). This File Contains The 50s
Subunit Of Molecule 2.
gi|160285447|pdb|1VSP|T Chain T, Interactions And Dynamics Of The Shine-Dalgarno Helix In
The 70s Ribosome. This File, 1vsp, Contains The 50s
Ribosome Subunit. 30s Ribosome Subunit Is In The File
2qnh
gi|209156539|pdb|3D5B|Z Chain Z, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 50s Subunit Of One 70s
Ribosome. The Entire Crystal Structure Contains Two 70s
Ribosomes As Described In Remark 400.
gi|209156593|pdb|3D5D|Z Chain Z, Structural Basis For Translation Termination On The 70s
Ribosome. This File Contains The 50s Subunit Of The
Second 70s Ribosome. The Entire Crystal Structure
Contains Two 70s Ribosomes As Described In Remark 400.
gi|218766816|pdb|3F1F|Z Chain Z, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes As Described In
Remark 400.
gi|218766872|pdb|3F1H|Z Chain Z, Crystal Structure Of A Translation Termination Complex
Formed With Release Factor Rf2. This File Contains The
50s Subunit Of The Second 70s Ribosome. The Entire
Crystal Structure Contains Two 70s Ribosomes As
Described In Remark 400.
gi|226887455|pdb|2WDI|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 50s Subunit For Molecule I.
gi|226887487|pdb|2WDJ|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A-Site Trna,
Deacylated P-Site Trna, And E-Site Trna. This File
Contains The 50s Subunit For Molecule Ii.
gi|226887544|pdb|2WDL|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 50s
Subunit For Molecule I.
gi|226887601|pdb|2WDN|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome In
Complex With Mrna, Paromomycin, Acylated A- And P-Site
Trnas, And E-Site Trna. This File Contains The 50s
Subunit For Molecule Ii.
gi|237823587|pdb|2WH2|Z Chain Z, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|237823646|pdb|2WH4|Z Chain Z, Insights Into Translational Termination From The Structure
Of Rf2 Bound To The Ribosome
gi|260100031|pdb|3HUX|Z Chain Z, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 50s Subunit For Molecule I.
gi|260100087|pdb|3HUZ|Z Chain Z, Structure Of Ef-P Bound To The 70s Ribosome; This File
Contains The 50s Subunit For Molecule Ii.
gi|261824545|pdb|2WRJ|Z Chain Z, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State (Part 2 Of 4).
gi|261824607|pdb|2WRL|Z Chain Z, The Structure Of The Ribosome With Elongation Factor G
Trapped In The Post-Translocational State. (Part 4 Of
4).
gi|261824666|pdb|2WRO|Z Chain Z, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 2 Of 4).
gi|261824725|pdb|2WRR|Z Chain Z, The Crystal Structure Of The 70s Ribosome Bound To Ef-Tu
And Trna (Part 4 Of 4).
gi|281307213|pdb|3KIR|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 2 Of 4)
gi|281307271|pdb|3KIT|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Precleavage State; Part 4 Of 4)
gi|281307329|pdb|3KIW|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 2 Of 4)
gi|281307387|pdb|3KIY|Z Chain Z, Structure Of Rele Nuclease Bound To The 70s Ribosome
(Postcleavage State; Part 4 Of 4)
gi|288965650|pdb|3KNI|Z Chain Z, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 50s Subunit For Molecule I
gi|288965682|pdb|3KNK|Z Chain Z, The Structures Of Viomycin Bound To The 70s Ribosome. This
File Contains The 50s Subunit For Molecule Ii.
gi|288965714|pdb|3KNM|Z Chain Z, The Structures Of Capreomycin Bound To The 70s Ribosome.
Thi Contains The 50s Subunit For Molecule I.
gi|288965746|pdb|3KNO|Z Chain Z, The Structures Of Capreomycin Bound To The 70s Ribosome.
Thi Contains The 50s Subunit For Molecule Ii
gi|294979494|pdb|3I8F|V Chain V, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8f Contains 50s Ribosomal Subunit. The 30s
Ribosoma Can Be Found In Pdb Entry 3i8g. Molecule B In
The Same Asym Unit Is Deposited As 3i8g (30s) And 3i8f
(50s).
gi|294979578|pdb|3I8I|V Chain V, Elongation Complex Of The 70s Ribosome With Three Trnas
And Entry 3i8i Contains 50s Ribosomal Subnit. The 30s
Ribosomal Can Be Found In Pdb Entry 3i8h. Molecule A In
The Same Asym Unit Is Deposited As 3i8f (50s) And 3i8g
(30s).
gi|294979632|pdb|3I9C|V Chain V, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9c Contains 50s Ribosomal Subunit Of Molecule B.
The 30s Subunit Can Be Found In Pdb Entry 3i9b. Molecule
A In The S Asymmetric Unit Is Deposited As 3i9d (30s)
And 3i9e (50s)
gi|294979686|pdb|3I9E|V Chain V, Initiation Complex Of 70s Ribosome With Two Trnas And
Mrna. 3i9e Contains 50s Ribosomal Subunit Of Molecule A.
The 30s Subunit Can Be Found In Pdb Entry 3i9d. Molecule
B In The S Asymmetric Unit Is Deposited As 3i9b (30s)
And 3i9c (50s)
gi|295982133|pdb|2X9S|Z Chain Z, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|295982192|pdb|2X9U|Z Chain Z, Structure Of The 70s Ribosome Bound To Release Factor 2
And A Substrate Analog Provides Insights Into Catalysis
Of Peptide Release
gi|300508650|pdb|3MRZ|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3mrz Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 3ms0.
Molecule A In The Same Asymmetric Unit Is Deposited As
3mr8 (50s) And 3ms1 (30s).
gi|300508705|pdb|3MS1|V Chain V, Recognition Of The Amber Stop Codon By Release Factor Rf1.
This Entry 3ms1 Contains 50s Ribosomal Subunit. The 30s
Ribosomal Subunit Can Be Found In Pdb Entry 3mr8.
Molecule B In The Same Asymmetric Unit Is Deposited As
3mrz (50s) And 3ms0 (30s).
gi|307568019|pdb|2XG0|Z Chain Z, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 2 Of 4)
gi|307568077|pdb|2XG2|Z Chain Z, Structure Of Cytotoxic Domain Of Colicin E3 Bound To The
70s Ribosome (Part 4 Of 4)
gi|309320306|pdb|3OH5|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Chloramphenicol. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320336|pdb|3OH7|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Chloramphenicol. This File Contains The
50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320408|pdb|3OHJ|Z Chain Z, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 50s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320438|pdb|3OHK|Z Chain Z, Structure Of The Thermus Thermophilus Ribosome Complexed
With Erythromycin. This File Contains The 50s Subunit Of
One 70s Ribosome. The Entire Crystal Structure Contains
Two 70s Ribosomes.
gi|309320489|pdb|3OHZ|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320540|pdb|3OI1|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Azithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320591|pdb|3OI3|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|309320642|pdb|3OI5|Z Chain Z, Structure Of The Thermus Thermophilus 70s Ribosome
Complexed With Telithromycin. This File Contains The 50s
Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|312207731|pdb|2XQE|Z Chain Z, The Structure Of Ef-Tu And Aminoacyl-Trna Bound To The 70s
Ribosome With A Gtp Analog
gi|313754055|pdb|2XTG|Z Chain Z, Trna Tranlocation On The 70s Ribosome: The Pre-
Translocational Translocation Intermediate Ti(Pre)
gi|313754113|pdb|2XUX|Z Chain Z, Trna Translocation On The 70s Ribosome: The Post-
Translocational Translocation Intermediate Ti(Post)
gi|325533460|pdb|2Y0V|Z Chain Z, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533519|pdb|2Y0X|Z Chain Z, The Crystal Structure Of Ef-Tu And A9c-Trna-Trp Bound To A
Near-Cognate Codon On The 70s Ribosome
gi|325533578|pdb|2Y0Z|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533637|pdb|2Y11|Z Chain Z, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|325533696|pdb|2Y13|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Near-Cognate Codon On The 70s Ribosome
gi|325533755|pdb|2Y15|Z Chain Z, The Crystal Structure Of Ef-Tu And G24a-Trna-Trp Bound To
A Cognate Codon On The 70s Ribosome.
gi|325533814|pdb|2Y17|Z Chain Z, Ef-Tu Complex 3
gi|325533873|pdb|2Y19|Z Chain Z, The Crystal Structure Of Ef-Tu And Trp-Trna-Trp Bound To A
Cognate Codon On The 70s Ribosome.
gi|347948851|pdb|3ZVP|Z Chain Z, Crystal Structure Of The Hybrid State Of Ribosome In
Complex With The Guanosine Triphosphatase Release Factor
3
gi|374074465|pdb|3UXQ|Z Chain Z, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|374074495|pdb|3UXR|Z Chain Z, The Structure Of Thermorubin In Complex With The 70s
Ribosome From Thermus Thermophilus. This File Contains
The 50s Subunit Of One 70s Ribosome. The Entire Crystal
Structure Contains Two 70s Ribosomes.
gi|380764389|pdb|3UYE|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764446|pdb|3UYG|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex
gi|380764480|pdb|3UZ1|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin
gi|380764510|pdb|3UZ2|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Leu Complex With Paromomycin.
gi|380764642|pdb|3UZ8|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Tyr Complex.
gi|380764672|pdb|3UZ9|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Cognate
Trna-Tyr Complex.
gi|380764706|pdb|3UZF|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex
gi|380764762|pdb|3UZH|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex.
gi|380764818|pdb|3UZK|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The First
70s Molecule In The Asymmetric Unit For The Near-Cognate
Trna-Tyr Complex With Paromomycin
gi|380764899|pdb|3UZN|V Chain V, Crystal Structure Analysis Of Ribosomal Decoding. This
Entry Contains The 50s Ribosomal Subunit Of The Second
70s Molecule In The Asymmetric Unit For The Near-cognate
Trna-tyr Complex With Paromomycin
gi|381353146|pdb|4ABS|Z Chain Z, Complex Of Smpb, A Tmrna Fragment And Ef-Tu-Gdp-Kirromycin
With The 70s Ribosome
gi|381353236|pdb|4DHA|Z Chain Z, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|381353290|pdb|4DHC|Z Chain Z, Crystal Structure Of Yaej Bound To The 70s Ribosome
gi|388325985|pdb|3V23|Z Chain Z, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 1st Ribosome In The Asu
gi|388326038|pdb|3V25|Z Chain Z, Crystal Structure Of Rmf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 2nd Ribosome In The Asu
gi|388326091|pdb|3V27|Z Chain Z, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 1st Ribosome In The Asu
gi|388326214|pdb|3V29|Z Chain Z, Crystal Structure Of Hpf Bound To The 70s Ribosome. This
Entry Contains The 50s Subunit Of The 2nd Molecule In
The Asu.
gi|388326267|pdb|3V2D|Z Chain Z, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 1st Ribosome In The Asu
gi|388326320|pdb|3V2F|Z Chain Z, Crystal Structure Of Yfia Bound To The 70s Ribosome. This
Pdb Entry Contains Coordinates For The 50s Subunit Of
The 2nd Ribosome In The Asu
gi|451928732|pdb|4G5L|V Chain V, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 50s Subunit Of Molecule A.
gi|451928785|pdb|4G5N|V Chain V, Crystal Structure Of The 70s Ribosome With Tetracycline.
This Entry Contains The 50s Subunit Of Molecule B.
gi|451928839|pdb|4G5U|V Chain V, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 50s Subunit Of Molecule A.
gi|451928893|pdb|4G5W|V Chain V, Crystal Structure Of The 70s Ribosome With Tigecycline.
This Entry Contains The 50s Subunit Of Molecule B.
gi|46197153|gb|AAS81567.1| LSU ribosomal protein L25P [Thermus thermophilus HB27]
gi|55772971|dbj|BAD71412.1| 50S ribosomal protein L25 (TL5) [Thermus thermophilus HB8]
gi|333967240|gb|AEG34005.1| 50S ribosomal protein L25 [Thermus thermophilus SG0.5JP17-16]
gi|383508933|gb|AFH38365.1| ribosomal protein L25, Ctc-form [Thermus thermophilus JL-18]
Length = 206
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 138 FVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
FV +D+ E+ V P+ F G + G++ GG L+ I + +I IEVDVS L
Sbjct: 89 FVLSDEPVEMYV--PLRFVGTPA--GVRAGGVLQEIHRDILVKVSPRNIPEFIEVDVSGL 144
Query: 198 DIGDRVFMSDIEVHPSWKL 216
+IGD + SD+++ P +L
Sbjct: 145 EIGDSLHASDLKLPPGVEL 163
>gi|336324464|ref|YP_004604431.1| 50S ribosomal protein L25 [Flexistipes sinusarabici DSM 4947]
gi|336108045|gb|AEI15863.1| 50S ribosomal protein L25 [Flexistipes sinusarabici DSM 4947]
Length = 214
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 84/202 (41%), Gaps = 46/202 (22%)
Query: 30 QAIPRECTGSRVSARDRSQGRIPAVVFAQ-----DLLDKNTD-RRSPSRKQILS----TE 79
+AIPRE +R G IPAVV ++ L K +D +R P I+ +
Sbjct: 8 EAIPREDMTKGQLKDNRENGMIPAVVSSRGKESTSLFVKLSDLQRRPYGNFIVDLVFPNK 67
Query: 80 RKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFV 139
+K I+ LK+++ F + +IL++ F
Sbjct: 68 KKPINCFLKNIQ---FSHVGY-------------------------------KILHVDFQ 93
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
G E+ +++P+ G GL KGG + + S+ H+ K E+D+S+LD+
Sbjct: 94 ELTKGQEVDIEIPLRLTG--EPVGLDKGGIVNQLIDSVMIRTLPRHLPEKFEMDISHLDV 151
Query: 200 GDRVFMSDIEVHPSWKLLSKNE 221
D + ++++E+ LL E
Sbjct: 152 NDSIDITELELPDEITLLDPTE 173
>gi|109898884|ref|YP_662139.1| 50S ribosomal protein L25/general stress protein Ctc
[Pseudoalteromonas atlantica T6c]
gi|123360668|sp|Q15SQ3.1|RL25_PSEA6 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|109701165|gb|ABG41085.1| LSU ribosomal protein L25P [Pseudoalteromonas atlantica T6c]
Length = 213
Score = 44.3 bits (103), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R G S R R + ++PAV++ L K + S ++ +
Sbjct: 7 TLDAEVRTDLGKGASRRLRHEDKVPAVLYG---LGKEAVSLTLSHNKVFQAQ-------- 55
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
E F S L + +V+ D + P K R+ +L F+ D L
Sbjct: 56 ---EFEAFYSHVLTLNVDGKKVEAVIKDMQR-HPFK-------PRVTHLDFLRVDAKQAL 104
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ +VP+ F + +K GG+ + ++ C + IEVDV+N+++G + +S
Sbjct: 105 QTNVPLHFVNEDKAESIKTHGGHAEHHMVDVEISCLPADLPEFIEVDVTNVELGQTLHLS 164
Query: 207 DI 208
DI
Sbjct: 165 DI 166
>gi|407937688|ref|YP_006853329.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. KKS102]
gi|407895482|gb|AFU44691.1| 50S ribosomal protein L25/general stress protein Ctc [Acidovorax
sp. KKS102]
Length = 211
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 76/181 (41%), Gaps = 23/181 (12%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R+ G+ P +V+ + Q++ + + LK
Sbjct: 5 AFERAKQGTGASRRLRNSGKTPGIVYG-----------GAAEPQLIEVDHNALWHALKK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F S+ +++ AG+ S V+L + P K +L++ F DD T+L +
Sbjct: 53 --EAFHSSVLDMEV-AGTTSKVVLRDVQYHPYK-------QLVLHIDFQRVDDKTKLHLK 102
Query: 151 VPVVFKGVESCPGLKKGG-YLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ + G E +K + + L C + I VD+S L+ G + + DI+
Sbjct: 103 VPLHYSGAEESNAVKVDKCMVNPVVNELDVTCMPSDLPEFIAVDLSKLEKGASLHLKDIK 162
Query: 210 V 210
+
Sbjct: 163 L 163
>gi|46447228|ref|YP_008593.1| 50S ribosomal protein L25 [Candidatus Protochlamydia amoebophila
UWE25]
gi|71153157|sp|Q6MAT1.1|RL25_PARUW RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|46400869|emb|CAF24318.1| putative general stress protein ctc [Candidatus Protochlamydia
amoebophila UWE25]
Length = 184
Score = 43.9 bits (102), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 44/194 (22%), Positives = 80/194 (41%), Gaps = 19/194 (9%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++AI R R R +G IPAV++ + + L+ + +S L+
Sbjct: 1 MKAILRTGKSKSEINRLRREGMIPAVLYVRG-----------KEGETLAINSAEFNSYLR 49
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
V+ +T F L GS VL+ + T ++++L F D ++
Sbjct: 50 HVKSGHLPTTIFTLVDEKGSERRVLVKD-------IQYAITTYQVMHLDFEELIDDHKIN 102
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
V VP+ G C G+K GG L+ + + C + + E+DV L + + D+
Sbjct: 103 VKVPIECTGTVDCVGVKLGGVLRQVIRHARIRCLPKDMPSFFELDVQELGLKQSKRLKDM 162
Query: 209 EVHPSWK-LLSKNE 221
+ + + L+ NE
Sbjct: 163 NIPETVRPLIDMNE 176
>gi|398969069|ref|ZP_10682682.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM30]
gi|398142763|gb|EJM31654.1| ribosomal protein L25, Ctc-form [Pseudomonas sp. GM30]
Length = 200
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 25/183 (13%)
Query: 28 TIQAIPRECTGSRVSAR-DRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
T+ A R G S R R +PAVV+ D ++P +L+ E +
Sbjct: 5 TLNAEVRSDLGKGASRRLRRLAALVPAVVYGGD--------KAPESISMLAKE------V 50
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K +E S L + G +V++ + + P K G +++ FV G +
Sbjct: 51 AKLLENEAAYSHIIELNV-GGKKQNVVIKALQRHPAK-------GHVMHADFVRVVAGQK 102
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
L VPV F E+ P +KKGG + + ++ C + + IEVD++N +IG V +S
Sbjct: 103 LTAIVPVHFIN-EAAP-VKKGGEISHVVAEIEVSCLPKDLPEFIEVDLANAEIGTIVHLS 160
Query: 207 DIE 209
D++
Sbjct: 161 DLK 163
>gi|381182422|ref|ZP_09891230.1| 50S ribosomal protein L25/general stress protein Ctc [Listeriaceae
bacterium TTU M1-001]
gi|380317696|gb|EIA21007.1| 50S ribosomal protein L25/general stress protein Ctc [Listeriaceae
bacterium TTU M1-001]
Length = 208
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 72/142 (50%), Gaps = 18/142 (12%)
Query: 107 GSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKK 166
GS +VLL +V P+K DE ++++ F+ + E++ DV + G G+K+
Sbjct: 67 GSKLNVLLHEYQVDPLK---DE----LIHVDFLAVNMSEEVEADVRIDLVG--DSSGVKE 117
Query: 167 GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLC 226
GG L+ + + + + IEVD++ L IGD + + DI ++++ ++ E++ +
Sbjct: 118 GGVLQQVLYEVTVAATPDKLPEAIEVDIAKLAIGDALTIGDIPKDKNYEIKTEAEEVVVT 177
Query: 227 ---------KISATKLENPEPA 239
++ T+++ PE A
Sbjct: 178 VSAPRTEEEAVADTEVKEPEAA 199
>gi|410463335|ref|ZP_11316858.1| ribosomal protein L25, Ctc-form [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409983543|gb|EKO39909.1| ribosomal protein L25, Ctc-form [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 196
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 97 STTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFK 156
S F L I SG ++ L KV RI ++ F D E++V VPV
Sbjct: 60 SHVFDLLIDGESGQ----ETKPALVWKVEHHPTKPRITHVDFYGVDLTKEIQVRVPVEVV 115
Query: 157 GVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKL 216
G G KGG L+ R S++ LC I KI +D++N+DI + + ++D+ + K
Sbjct: 116 G--KSKGQVKGGQLEIHRESIEVLCLPLVIPDKIVLDITNVDINESILIADVVLPEGVKA 173
Query: 217 LSKN 220
+ N
Sbjct: 174 VYDN 177
>gi|186475083|ref|YP_001856553.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
phymatum STM815]
gi|226736291|sp|B2JCN8.1|RL25_BURP8 RecName: Full=50S ribosomal protein L25; AltName: Full=General
stress protein CTC
gi|184191542|gb|ACC69507.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
phymatum STM815]
Length = 203
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 26/180 (14%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI-HSILKS 89
A R G+ S R R+ G+ P +V+ Q++ + + H++ K
Sbjct: 5 AFERNLQGTGASRRLRNSGKAPGIVY------------GAGEPQLIELDHNALWHALKKE 52
Query: 90 VELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKV 149
F S+ L++ AG VLL + P + +L++ F D +L
Sbjct: 53 A----FHSSILELEV-AGKSQQVLLRDVQYHPFR-------QLVLHVDFQRVDAKKKLHT 100
Query: 150 DVPVVFKGVESCPGLKKGGYLKS-IRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VP+ F E+ P +K GG + S + ++ C + IEVD++ ++ G + +DI
Sbjct: 101 KVPLHFMNQETNPAVKLGGAIISHVINEIEIECLPAALPEFIEVDLAKIEAGQSLHATDI 160
>gi|392551834|ref|ZP_10298971.1| 50S ribosomal protein L25 [Pseudoalteromonas spongiae
UST010723-006]
Length = 204
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 77/182 (42%), Gaps = 24/182 (13%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+T+ A R G+ S R R ++PAV++ + K+ +S + +
Sbjct: 6 YTLDAEVRSDLGTGASRRLRRADKVPAVLYG-------------AEKEAVSLTLAH-NKV 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+K+ E F S L I ++L D + R ++++L F D +
Sbjct: 52 IKAQEDEGFYSHILTLNIGGEKVEAILKD--------IQRHPFKPKVMHLDFQRVDANHK 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ VPV F E+ K G + + T ++ C + IEVDV+ L++G V +S
Sbjct: 104 IHTKVPVHFLNEEAAT--KGGNTVAHLVTEIEITCLPAQLPEFIEVDVAALEVGATVHLS 161
Query: 207 DI 208
DI
Sbjct: 162 DI 163
>gi|390568417|ref|ZP_10248723.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
terrae BS001]
gi|420253485|ref|ZP_14756536.1| ribosomal protein L25, Ctc-form [Burkholderia sp. BT03]
gi|389939583|gb|EIN01406.1| 50S ribosomal protein L25/general stress protein Ctc [Burkholderia
terrae BS001]
gi|398052056|gb|EJL44353.1| ribosomal protein L25, Ctc-form [Burkholderia sp. BT03]
Length = 203
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 24/179 (13%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R+ G+ P +V+ Q++ + + LK
Sbjct: 5 AFERNLQGTGASRRLRNSGKTPGIVYGA------------GEPQLIELDHNALFHALKK- 51
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F ++ L++ AG VLL + P + IL++ F D +L
Sbjct: 52 --EAFHASILDLEV-AGKSQQVLLRDVQYHPFR-------QIILHVDFQRVDASKKLHTK 101
Query: 151 VPVVFKGVESCPGLKKGGYLKS-IRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
VP+ F ES P +K GG + S + ++ C + IEVD+ ++ G + +DI
Sbjct: 102 VPLHFMNQESNPAVKTGGAIISHVINEIEIECLPAALPEFIEVDLVKIEAGQSLHATDI 160
>gi|345018266|ref|YP_004820619.1| 50S ribosomal protein L25 [Thermoanaerobacter wiegelii Rt8.B1]
gi|392939414|ref|ZP_10305058.1| ribosomal protein L25, Ctc-form [Thermoanaerobacter siderophilus
SR4]
gi|344033609|gb|AEM79335.1| 50S ribosomal protein L25 [Thermoanaerobacter wiegelii Rt8.B1]
gi|392291164|gb|EIV99607.1| ribosomal protein L25, Ctc-form [Thermoanaerobacter siderophilus
SR4]
Length = 202
Score = 43.9 bits (102), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 88/192 (45%), Gaps = 29/192 (15%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+I+AI R+ TG + ++QG IPA+++ K P L+ E + +L
Sbjct: 5 SIEAIKRD-TGKNAARCLKNQGYIPAILYG-----KGMAESIP-----LAVEYNALQRLL 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ + I GS + ++ ++ D G+I+++ F E+
Sbjct: 54 QKHGRNVLLNV-----IVDGSTHNAVIK-------EIQEDTLKGKIIHVDFQRVSMYEEI 101
Query: 148 KVDVPVVFKGVESCPGL--KKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ VP+ F+G+ GL +GG ++ L + I +I VD+SNL+IGD +F+
Sbjct: 102 EATVPLKFEGI----GLIESRGGIVQHQLWELTVESLPDKIPQEIVVDLSNLEIGDTLFV 157
Query: 206 SDIEVHPSWKLL 217
DI+V K++
Sbjct: 158 KDIQVPEGVKVV 169
>gi|377819691|ref|YP_004976062.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
sp. YI23]
gi|357934526|gb|AET88085.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Burkholderia
sp. YI23]
Length = 205
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 25/182 (13%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI-HSIL 87
+ A R G+ S R R+ G+ P +V+ + TD Q++ + + H++
Sbjct: 3 VVAFERSKQGTGASRRLRNSGKTPGIVYGGE-----TDV------QLVELDHNALWHALK 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K V F S+ L++ AG VLL + P K +L++ F D +L
Sbjct: 52 KEV----FHSSILDLEV-AGKSQPVLLRDVQYHPFK-------QLVLHVDFQRVDAKKKL 99
Query: 148 KVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
VP+ F E+ P +K G + + T L+ C + +E+D++ ++ G +
Sbjct: 100 HTKVPLHFMNQETNPAVKLSGAVISHVVTELEVECLPADLPEFLEIDLAKIEAGQTMHAK 159
Query: 207 DI 208
DI
Sbjct: 160 DI 161
>gi|344941072|ref|ZP_08780360.1| 50S ribosomal protein L25 [Methylobacter tundripaludum SV96]
gi|344262264|gb|EGW22535.1| 50S ribosomal protein L25 [Methylobacter tundripaludum SV96]
Length = 199
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%)
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIE 191
++L++ F+ LKV VP+ F ++ G KKGG + ++ C + IE
Sbjct: 88 QVLHMDFLRVTMSEALKVHVPLHFVNEQTSVGGKKGGIVTHAMIDVEVSCLPAALPDYIE 147
Query: 192 VDVSNLDIGDRVFMSDI 208
VD+ LDIG+ +SDI
Sbjct: 148 VDLGGLDIGESAHLSDI 164
>gi|336112717|ref|YP_004567484.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus
coagulans 2-6]
gi|335366147|gb|AEH52098.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Bacillus
coagulans 2-6]
Length = 209
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 2/91 (2%)
Query: 118 KVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSL 177
V+ +V D +I+++ F+ + ++ V V+ E C G+K GG L+ L
Sbjct: 71 NVMVHEVQTDPLKNKIIHVDFLAVNMSEDVDATVRVILS--EECAGVKDGGVLQQALHEL 128
Query: 178 KYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ I I VDVSNL +G+ + ++DI
Sbjct: 129 SITTKPDQIPDAITVDVSNLQVGENITVADI 159
>gi|119477473|ref|ZP_01617664.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma
proteobacterium HTCC2143]
gi|119449399|gb|EAW30638.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [marine gamma
proteobacterium HTCC2143]
Length = 216
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 63/127 (49%), Gaps = 9/127 (7%)
Query: 83 IHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD 142
++ I+K E F ++ L + S V+ D ++ H ET I+++ F+
Sbjct: 48 MNEIVKLAENEAFFTSLVDLNLDGKSEQVVIKD------MQRHPARET--IMHVDFLRVS 99
Query: 143 DGTELKVDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGD 201
T++ + VP F ++C G+K +GG + ++ C + + IEVD++ L +GD
Sbjct: 100 AKTKITMQVPFHFTNEDTCHGVKIEGGSVSHALNDIEITCLPKDLPEYIEVDMAALKVGD 159
Query: 202 RVFMSDI 208
V +SD+
Sbjct: 160 NVHLSDL 166
>gi|332306083|ref|YP_004433934.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Glaciecola
sp. 4H-3-7+YE-5]
gi|410643509|ref|ZP_11354005.1| large subunit ribosomal protein L25 [Glaciecola chathamensis S18K6]
gi|410645146|ref|ZP_11355614.1| large subunit ribosomal protein L25 [Glaciecola agarilytica NO2]
gi|332173412|gb|AEE22666.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Glaciecola
sp. 4H-3-7+YE-5]
gi|410135379|dbj|GAC04013.1| large subunit ribosomal protein L25 [Glaciecola agarilytica NO2]
gi|410136919|dbj|GAC12192.1| large subunit ribosomal protein L25 [Glaciecola chathamensis S18K6]
Length = 213
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 23/182 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R G S R R + ++PAV++ L K + S ++ +
Sbjct: 7 TLDAEVRTDLGKGASRRLRHEDKVPAVLYG---LGKEAVSLTLSHNKVFQAQ-------- 55
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
E F S L + +V+ D + P K R+ +L F+ D L
Sbjct: 56 ---EFEAFYSHVLTLNVDGKKVEAVVKDMQR-HPFK-------PRVTHLDFLRVDAKQAL 104
Query: 148 KVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ +VP+ F + +K GG+ + ++ C + IEVDV+N+++G + +S
Sbjct: 105 QTNVPLHFVNEDKAESIKTLGGHAEHHMVDVEISCLPNDLPEFIEVDVANVELGQTLHLS 164
Query: 207 DI 208
DI
Sbjct: 165 DI 166
>gi|315453575|ref|YP_004073845.1| Ribosomal protein L25, ctc protein-like protein [Helicobacter felis
ATCC 49179]
gi|315132627|emb|CBY83255.1| Ribosomal protein L25, ctc protein homolog [Helicobacter felis ATCC
49179]
Length = 178
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 99 TFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGV 158
T Q++ G + +V+ +D + ++++ + + G K VPV G
Sbjct: 54 TLDFQVKVGEKAY------QVVVQNYQKDPVSNALMHVDLLVLNTGAVSKFHVPVKVHG- 106
Query: 159 ESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLL 217
+ GLK G L ++ ++ C E + E+DVS+LD+GD + + D++V S K+L
Sbjct: 107 -TPVGLKNKGILMISKSRVQVACKPEDLISSFELDVSSLDVGDVILVRDLKVPASVKIL 164
>gi|398309137|ref|ZP_10512611.1| 50S ribosomal protein L25/general stress protein Ctc [Bacillus
mojavensis RO-H-1]
Length = 205
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 77/177 (43%), Gaps = 27/177 (15%)
Query: 34 RECTG-SRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVE 91
+E TG +R S RD R+ G +P +++ +D +K S + L E K
Sbjct: 7 KERTGFTRSSLRDIRTSGHVPGIIYGKDTANKPVSLDSVELIKTLRDEGK---------- 56
Query: 92 LPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDV 151
+T L + G +V++ + P+K +++N+ E++V+V
Sbjct: 57 -----NTVLTLDVN-GEKHAVMVTELQTDPLKNEVTHADFQVVNM-------SEEIEVEV 103
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
P+ G G+K GG L+ +L + I IE D+S LD+ D + + D+
Sbjct: 104 PIHLTG--EAIGVKNGGVLQQPLYALTVKAKPKAIPQSIEADISGLDVNDVLTIEDL 158
>gi|320109099|ref|YP_004184689.1| ribosomal 5S rRNA E-loop-binding protein Ctc/L25/TL5 [Terriglobus
saanensis SP1PR4]
gi|319927620|gb|ADV84695.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Terriglobus
saanensis SP1PR4]
Length = 233
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 29/191 (15%)
Query: 22 TTSYYHTIQAIPRECTGSRVSARD-RSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILST 78
T+ I A+PR ++ AR R G IPAVV+ QD + D ++ +R IL +
Sbjct: 2 ATTIPEAIAAVPRTGKFNKNHARRVRVSGLIPAVVYGAGQDSVAVTVDPKAITR--ILHS 59
Query: 79 ERKQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVF 138
E +T F L + ++ + PIK G++L++ F
Sbjct: 60 ESGH--------------NTIFDLSVEGTGVVKAMIVDWQYEPIK-------GKLLHIDF 98
Query: 139 VWADDGTELKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNL 197
++V VPV+ GV G+K GG L I ++ C I I+VDV+ L
Sbjct: 99 KRIAMDKAMRVSVPVMLTGVPV--GVKNSGGILDQILREVQIECLPGDIPSHIDVDVAGL 156
Query: 198 DIGDRVFMSDI 208
++ + ++D+
Sbjct: 157 ELYGAIHVADL 167
>gi|294506808|ref|YP_003570866.1| 50S ribosomal protein L25 [Salinibacter ruber M8]
gi|294343136|emb|CBH23914.1| 50S ribosomal protein L25 [Salinibacter ruber M8]
Length = 260
Score = 43.9 bits (102), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 85/184 (46%), Gaps = 33/184 (17%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIH---S 85
I+A PRE TGS+ + R+ R+P V++ + + ++T + P ++ K I+ +
Sbjct: 35 IEAQPRE-TGSKAAREIRNNDRVPCVLYGRTV--ESTPLQIP-----IAALNKLIYRRSA 86
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ VE+ G + +L + P+ T R L+ F ++G
Sbjct: 87 PVAEVEM-------------NGDTWNCILKDYDLHPL-------TDRPLHADFQALEEGD 126
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
E+ + VP+ + G+ G + GG + I L E+I +IEVD+ L IGD + +
Sbjct: 127 EVTLTVPLNYTGIPV--GQQNGGDTQQIARELTISVLPENIPAQIEVDIGELVIGDSLHV 184
Query: 206 SDIE 209
D+E
Sbjct: 185 YDLE 188
>gi|410622130|ref|ZP_11332969.1| large subunit ribosomal protein L25 [Glaciecola pallidula DSM 14239
= ACAM 615]
gi|410158528|dbj|GAC28343.1| large subunit ribosomal protein L25 [Glaciecola pallidula DSM 14239
= ACAM 615]
Length = 211
Score = 43.5 bits (101), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/211 (21%), Positives = 89/211 (42%), Gaps = 25/211 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A R G R S R R Q ++PA+V+ + +P ++ E +++ +
Sbjct: 8 LDATIRTDIGKRASRRLRLQDKVPAIVYGGE--------EAPIS---ITLEHNKVN---Q 53
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+ E F S + I G VL+ + P K ++ ++ F G L
Sbjct: 54 AQEFEAFYSHVLTINID-GKKVEVLVKDMQRHPFK-------PKVTHIDFQRVIAGQTLT 105
Query: 149 VDVPVVFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+VP+ F +K GG+ + ++ LC + + IE+D+ N+++G + +SD
Sbjct: 106 TNVPIHFINAAESDAIKLNGGHAEHHMNDIEVLCMPKDLPEYIEIDLRNIEMGQTIHLSD 165
Query: 208 IEVHPSWK--LLSKNEKMPLCKISATKLENP 236
++ + L K E+ L ++ + P
Sbjct: 166 VKFPKGVESVELGKGEEHDLAVVTVKTAKGP 196
>gi|389873391|ref|YP_006380810.1| 50S ribosomal protein L25/general stress protein Ctc [Advenella
kashmirensis WT001]
gi|388538640|gb|AFK63828.1| 50S ribosomal protein L25/general stress protein Ctc [Advenella
kashmirensis WT001]
Length = 215
Score = 43.5 bits (101), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 81/210 (38%), Gaps = 27/210 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+A R GS S R R GR+PA+V+ Q + + +I L+
Sbjct: 3 FEATTRSVQGSSASRRLRRAGRVPAIVYG-----------GKGEAQSIELDHNEIFHALR 51
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTE 146
+ PF S ++LD K VL V +L++ F
Sbjct: 52 --KEPFHTSVL-----------DMMLDGKKQTVLLRAVQWHSYKPLVLHVDFQRVSANEA 98
Query: 147 LKVDVPVVFKGVESCPGLKK-GGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
L +P F + P +K+ G + + ++ C + + IEVD+ NL + V +
Sbjct: 99 LTTRIPFHFINGDESPAVKQQGATISHVLNDIEITCLPKDLPQFIEVDLGNLQANEVVHL 158
Query: 206 SDIEVHPSWKLLSKNEKMPLCKISATKLEN 235
SD++V + + E+ P+ + E+
Sbjct: 159 SDVKVPAGVEFVGVGEESPVLATATVITES 188
>gi|260427669|ref|ZP_05781648.1| ribosomal protein L25, Ctc-form [Citreicella sp. SE45]
gi|260422161|gb|EEX15412.1| ribosomal protein L25, Ctc-form [Citreicella sp. SE45]
Length = 206
Score = 43.5 bits (101), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 71/178 (39%), Gaps = 21/178 (11%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A+ R TG + + R G +P ++F D P Q+ + +L +
Sbjct: 10 ALERSGTGKGAARQARRDGMVPGILFGGDA--------EPLAIQM------PFNKMLHQL 55
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
+ F T F L++ D +V+ V RD + + T + +
Sbjct: 56 KAGRFKQTLFNLKVEGH-------DDVRVICRDVQRDVVKDLPTHFDLMRLRRTTRINLF 108
Query: 151 VPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
+ V F E PGLK+GG L +R ++ A I I VD+ IGD + +SD+
Sbjct: 109 IHVDFINEEKAPGLKRGGVLTIVRQEVELNVLAGDIPDHITVDLEGKQIGDVIHISDV 166
>gi|388569481|ref|ZP_10155873.1| 50S ribosomal protein L25/general stress protein Ctc
[Hydrogenophaga sp. PBC]
gi|388263230|gb|EIK88828.1| 50S ribosomal protein L25/general stress protein Ctc
[Hydrogenophaga sp. PBC]
Length = 209
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 75/193 (38%), Gaps = 23/193 (11%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R GR P +VF + + + L E H+ + +
Sbjct: 5 AFERAKQGTGASRRLRITGRAPGIVFGGTAAPVSIELDHNALWHALKKE--AFHASILDM 62
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
EL G VLL + P K ++L++ F DD T L+
Sbjct: 63 EL-------------GGKVEKVLLRDVQYHPFK-------PQVLHVDFQRVDDKTRLRKK 102
Query: 151 VPVVFKGVESCPGLKKGGYL-KSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VP+ F G E P +K L + ++ C A + I VD+S + G V DI+
Sbjct: 103 VPLHFTGAEESPAVKLDKCLVNHVINEIEIECLATQLPENITVDLSQVTKGATVHAGDIK 162
Query: 210 VHPSWKLLSKNEK 222
+ K+++ K
Sbjct: 163 LPKGVKIVTHGRK 175
>gi|398810407|ref|ZP_10569226.1| ribosomal protein L25, Ctc-form [Variovorax sp. CF313]
gi|398083039|gb|EJL73771.1| ribosomal protein L25, Ctc-form [Variovorax sp. CF313]
Length = 227
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 23/197 (11%)
Query: 31 AIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSV 90
A R G+ S R R G+ P +V+ D ++ Q++ + + LK
Sbjct: 5 AFERAKQGTGASRRLRISGKTPGIVYGGD-----------TQPQLIEIDHNALWHALKK- 52
Query: 91 ELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVD 150
F ++ ++I G+ S VLL + P + + ++ F D T + +
Sbjct: 53 --EAFHASVLEMEI-GGAVSKVLLRDVQYHPFR-------QLVQHIDFQRVDAKTRMTMK 102
Query: 151 VPVVFKGVESCPGLKKG-GYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIE 209
VPV FKG E +K + + T L+ C + IEVD+S L V + DI+
Sbjct: 103 VPVHFKGEEESEAVKIDLNLVNHVTTELELNCLPSDLPEFIEVDLSGLKKNGTVTLKDIK 162
Query: 210 VHPSWKLLSKNEKMPLC 226
+ K +S + P+
Sbjct: 163 LPKGVKWVSHGKVNPVL 179
>gi|333999131|ref|YP_004531743.1| 50S ribosomal protein L25, Ctc-form [Treponema primitia ZAS-2]
gi|333740870|gb|AEF86360.1| ribosomal protein L25, Ctc-form [Treponema primitia ZAS-2]
Length = 214
Score = 43.5 bits (101), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R +GS + R R +GRIPAVV+ R+ I + I+S+ E
Sbjct: 11 RAESGSAEARRTRKEGRIPAVVYG----------RTGKALSIDLDALEFINSVRGISE-- 58
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
ST + + + + + D+ R+ G+IL++ F + G L+ V V
Sbjct: 59 ---STIVTINVDGQAHEAFVKDT--------QRNITDGQILHVDFYEVERGVSLRAKVSV 107
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
G + G+++GG L+S ++ C + + +I+VD++ L + + + D+++
Sbjct: 108 HVHG--NPVGVREGGILESPLHDIEVECLPKDLPERIDVDIAELKVNQSIHVRDLKLGEG 165
Query: 214 WKLLSKNEKM 223
+L+S +++
Sbjct: 166 VRLISNPDQV 175
>gi|308050540|ref|YP_003914106.1| 50S ribosomal protein L25 [Ferrimonas balearica DSM 9799]
gi|307632730|gb|ADN77032.1| LSU ribosomal protein L25P [Ferrimonas balearica DSM 9799]
Length = 210
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 72/189 (38%), Gaps = 38/189 (20%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQD------LLDKNTDRRSPSRKQILSTERK 81
T A R G+ S R R R+PAV++ D LD N
Sbjct: 5 TFDAEVRTEIGTGASRRLRRAERLPAVLYGADEAPVAITLDHN----------------- 47
Query: 82 QIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPI--KVHRDEETGRILNLVFV 139
+ ++ EL F S L I D KV I + R ++L++ F
Sbjct: 48 ---KVNQAQELEAFYSQILILNI----------DGKKVEAIVKAMQRHPYKPKLLHIDFQ 94
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
G + VP+ F E G++ GG + + + C + + IEVD NL+
Sbjct: 95 RVKRGEAMTATVPLHFINEEDSAGVRAGGTVMHLVNEVTIRCLPQDLPENIEVDTLNLNT 154
Query: 200 GDRVFMSDI 208
G+ + +SD+
Sbjct: 155 GETLHLSDL 163
>gi|407455655|ref|YP_006734546.1| 50S ribosomal protein L25 [Chlamydia psittaci GR9]
gi|407458392|ref|YP_006736697.1| 50S ribosomal protein L25 [Chlamydia psittaci WS/RT/E30]
gi|405782198|gb|AFS20947.1| ribosomal protein L25, Ctc-form [Chlamydia psittaci GR9]
gi|405785087|gb|AFS23833.1| ribosomal protein L25, Ctc-form [Chlamydia psittaci WS/RT/E30]
Length = 185
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 80/179 (44%), Gaps = 23/179 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFA--QDLLDKNTDRRSPSRKQILSTERKQIHSILKSVE 91
RE + + R G IPAV+++ + L + D S+ L S+E
Sbjct: 8 RETDKKSLLKKIRQTGGIPAVIYSGGKSLANIVVDAHVFSK-------------FLSSLE 54
Query: 92 LPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDV 151
ST F L + +++ D + + ++++L F + ++K+++
Sbjct: 55 SGALSSTIFSLSYEGRTIKALVKD--------IQYQVTSYKVIHLDFEELIEDRDVKLNI 106
Query: 152 PVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
P+ C G+K GG L+ + +L+ +C + + P +E+DV +L + +SDI++
Sbjct: 107 PIRCINAVDCVGVKLGGSLRQVIRALRVVCKPKDVVPYLELDVRSLGLSQTRKLSDIQL 165
>gi|225166107|ref|ZP_03727838.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Diplosphaera
colitermitum TAV2]
gi|224799649|gb|EEG18147.1| ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5 [Diplosphaera
colitermitum TAV2]
Length = 250
Score = 43.5 bits (101), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 42/189 (22%), Positives = 81/189 (42%), Gaps = 23/189 (12%)
Query: 23 TSYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQ 82
++ H + PR TG S R R +IPA+++ + ++ + L+ + +
Sbjct: 2 STTQHILNVAPRAQTGRSASRRVRKANQIPAILYGKH-----------TKPETLAVDAPE 50
Query: 83 IHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPI--KVHRDEETGRILNLVFVW 140
+LK+V + +++ ++ K L +V RD T R L++
Sbjct: 51 FAKLLKAV-----AGRSLIIELHRKDKAT----DNKALSFLQEVQRDPITDRFLHVDLQE 101
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
++ ++VPV G ES + G L +L+ C + + P IEVDV+ L G
Sbjct: 102 VKADEKMDINVPVSLVG-ESFGVKNQNGVLDINAHTLRIRCLPKDLPPHIEVDVTELKAG 160
Query: 201 DRVFMSDIE 209
+ + + I+
Sbjct: 161 ESIKVGSIK 169
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,731,631,094
Number of Sequences: 23463169
Number of extensions: 151783422
Number of successful extensions: 310511
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 867
Number of HSP's successfully gapped in prelim test: 863
Number of HSP's that attempted gapping in prelim test: 308702
Number of HSP's gapped (non-prelim): 1917
length of query: 241
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 103
effective length of database: 9,121,278,045
effective search space: 939491638635
effective search space used: 939491638635
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 75 (33.5 bits)