BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026232
(241 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3YT12|RL25_EHRCJ 50S ribosomal protein L25 OS=Ehrlichia canis (strain Jake) GN=rplY
PE=3 SV=1
Length = 209
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 26/208 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSP--SRKQILSTERKQIHSI 86
I A RE G+ + R G IPAVV+ KN D S S ++ LS R
Sbjct: 9 INASLRENVGTGPARAVRRNGGIPAVVYG-----KNRDSLSVFLSDREFLSKHRSA---- 59
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
+T +++ G VL V + T RI ++ F + D GTE
Sbjct: 60 ---------ALSTHLIELEIGDKKEY------VLMRDVQKHPVTDRIQHVDFQFIDYGTE 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+K++VP++F + C G+K+GG L + +L C I IE+D+S+L G + +S
Sbjct: 105 IKIEVPLIFTNEQKCIGVKRGGVLNILHRTLSIKCLPNAILQNIEIDLSDLTAGHSIHVS 164
Query: 207 DIEVHPSWKLLSKNEKMPLCKISATKLE 234
D+ + P ++ K + IS+T +E
Sbjct: 165 DLNLPPEINVVMKEHNPAIVTISSTSME 192
>sp|Q5HC84|RL25_EHRRW 50S ribosomal protein L25 OS=Ehrlichia ruminantium (strain
Welgevonden) GN=rplY PE=3 SV=1
Length = 208
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 32/203 (15%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSP-----SRKQILSTERKQIHSILK 88
R G+ S R G IPAVV+ + RSP S ++ LS R
Sbjct: 14 RNSVGTGPSRTLRRNGAIPAVVYGK--------HRSPLSIYLSDREFLSKYRSA------ 59
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+T +++ G VL + + T RI ++ F + D GTE+K
Sbjct: 60 -------ALSTHLIELEIGEKKEY------VLMRDIQKHPVTDRIQHVDFQFIDHGTEIK 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VP+VF + C G+KKGG L + +L C I IEVD++NL IG + +SD+
Sbjct: 107 IEVPLVFVNEQRCVGVKKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDL 166
Query: 209 EVHPSWKLLSKNEKMPLCKISAT 231
+ ++ K L IS T
Sbjct: 167 NLPSEVTVVMKEHNPTLVTISGT 189
>sp|Q5FFA2|RL25_EHRRG 50S ribosomal protein L25 OS=Ehrlichia ruminantium (strain Gardel)
GN=rplY PE=3 SV=2
Length = 208
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 89/203 (43%), Gaps = 32/203 (15%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSP-----SRKQILSTERKQIHSILK 88
R G+ S R G IPAVV+ + RSP S ++ LS R
Sbjct: 14 RNSVGTGPSRTLRRNGAIPAVVYGK--------HRSPLSIYLSDREFLSKYRSA------ 59
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
+T +++ G VL + + T RI ++ F + D GTE+K
Sbjct: 60 -------ALSTHLIELEIGEKKEY------VLMRDIQKHPVTDRIQHVDFQFIDHGTEIK 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VP+VF + C G+KKGG L + +L C I IEVD++NL IG + +SD+
Sbjct: 107 IEVPLVFVNEQRCVGVKKGGVLNILHRTLHIKCLPNAILQSIEVDLANLTIGHSIHVSDL 166
Query: 209 EVHPSWKLLSKNEKMPLCKISAT 231
+ ++ K L IS T
Sbjct: 167 NLPSEVTVVMKEHNPTLVTISGT 189
>sp|Q2NAN1|RL25_ERYLH 50S ribosomal protein L25 OS=Erythrobacter litoralis (strain
HTCC2594) GN=rplY PE=3 SV=1
Length = 229
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 89/181 (49%), Gaps = 22/181 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A RE G S R +GR+PAV++ + P+ ++ E K + +
Sbjct: 6 TLPAEARERAGKGASRALRREGRVPAVIYGG--------KEEPT---MIHVEEKLL---I 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K + F ++ ++I G +V + LP V + R + F G ++
Sbjct: 52 KQLMTGHFMNSIVEIEI---GGKTV-----RTLPKDVALHPVSDRPEHADFFRLAKGGKI 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+V VPVVF E+ PGLKKGG L +R L+ +C + I +IE+DV+ ++GD + +S+
Sbjct: 104 EVSVPVVFMNEEASPGLKKGGVLNVVRHELELVCENDKIPGEIEIDVTGKEVGDSIHISE 163
Query: 208 I 208
I
Sbjct: 164 I 164
>sp|Q2GHW3|RL25_EHRCR 50S ribosomal protein L25 OS=Ehrlichia chaffeensis (strain
Arkansas) GN=rplY PE=3 SV=1
Length = 210
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 97/208 (46%), Gaps = 26/208 (12%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
I A R+ G+ S R G IPAV++ K D S +S ++ S +
Sbjct: 9 INASLRKNVGTGPSRALRLSGEIPAVIYG-----KGRDSLS------ISLSNREFVSKYR 57
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTE 146
S L +T +++ +D+ K VL V + T RI ++ F + D GTE
Sbjct: 58 SAAL-----STHLIELE--------IDNKKEYVLMRDVQKHPVTDRIQHVDFQFIDYGTE 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+K++VP++F + C G+K+GG L + +L C + I IE+D+S L G + +S
Sbjct: 105 IKIEVPLIFTNEQKCIGIKRGGVLNILHRTLSIKCSPKAILQNIEIDLSGLTTGHSIHVS 164
Query: 207 DIEVHPSWKLLSKNEKMPLCKISATKLE 234
D+++ P + K + IS+ E
Sbjct: 165 DLKLPPEVNVTMKEHNPAIVTISSASTE 192
>sp|B8EK41|RL25_METSB 50S ribosomal protein L25 OS=Methylocella silvestris (strain BL2 /
DSM 15510 / NCIMB 13906) GN=rplY PE=3 SV=1
Length = 227
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 22/179 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R TG + R +GRIP V++ D P ++ + ++++ ++
Sbjct: 6 TLAAAARHGTGKGAARSVRREGRIPGVIYG------GGDPAEP-----ITLDYRELNKLI 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ F +T F + + AG+ V+ ++ PIK L++ F+ G L
Sbjct: 55 YAGH---FLTTLFEIDV-AGTKQRVIPRDYQLDPIK-------DLPLHVDFLRLKPGASL 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
KV+VPV F E+CPG+KKGG + +R S++ PA+ I I D+ L+I D + ++
Sbjct: 104 KVEVPVHFLNQETCPGVKKGGSVNIVRHSIELRVPADDIPEAITADLGELEINDSLHLT 162
>sp|Q1GSP2|RL25_SPHAL 50S ribosomal protein L25 OS=Sphingopyxis alaskensis (strain DSM
13593 / LMG 18877 / RB2256) GN=rplY PE=3 SV=1
Length = 212
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 22/181 (12%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A RE G S R GR+PAVV+ + P ++ E K + +
Sbjct: 6 TLTAETRERGGKGASRELRRNGRVPAVVYGG--------KEEP---LMIHVEEKLL---M 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K + F ++ +++ G + + LP V R ++ F+ +
Sbjct: 52 KQLMTGHFMNSVVMIEV---GGKQI-----RTLPKDVAFHPVKDRPIHADFLRIAKDATV 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
+V VPVVF+ E PGLK+GG L +R L+ +C A++I +I +DV+ DIGD + +S+
Sbjct: 104 QVAVPVVFQNEEKSPGLKRGGVLNIVRHELELVCDADNIPDEIAIDVTGFDIGDSIHISN 163
Query: 208 I 208
+
Sbjct: 164 V 164
>sp|Q7NNL2|RL25_GLOVI 50S ribosomal protein L25 OS=Gloeobacter violaceus (strain PCC
7421) GN=rplY PE=3 SV=1
Length = 211
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 90/186 (48%), Gaps = 24/186 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
+ TG++ A R +GRIPAV++ ++ L E++ +LK V +
Sbjct: 9 QRATGAQPRAM-RREGRIPAVLYGH----------RGTQSLALELEQRTAEDLLKRVTI- 56
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+T PL++ G SG VL +V D G++L+L F + +D+P+
Sbjct: 57 --NNTILPLKVERGW-------SGDVLLREVQHDAVGGKLLHLSFFAVAGHGSITLDLPL 107
Query: 154 VFKGVESCPGLK-KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHP 212
VF G G+K GG L+ + T L P + IEVD+S + +GD +++ D+ + P
Sbjct: 108 VFTG--EAVGVKMDGGLLEKVLTQLTVNTPPTDVPEAIEVDISTMQVGDMLYVKDLVLPP 165
Query: 213 SWKLLS 218
++++
Sbjct: 166 GIEVVN 171
>sp|A5CF34|RL25_ORITB 50S ribosomal protein L25 OS=Orientia tsutsugamushi (strain
Boryong) GN=rplY PE=3 SV=1
Length = 207
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 88/178 (49%), Gaps = 24/178 (13%)
Query: 42 SARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTF 100
SAR R QG++P V++ + + +P + T K++ + + PFF ST
Sbjct: 19 SARALRRQGKVPGVIYKKGI--------TPIH---VCTLEKEVAKLYRK---PFFSSTVI 64
Query: 101 PLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWAD-DGTELKVDVPVVFKGVE 159
LQ+ KVLP V T + ++ F+ + +G+ KV VP+ F+G E
Sbjct: 65 QLQVDD--------QRFKVLPKAVQLHPVTEFMNHIDFILVEQNGSMQKVKVPISFEGKE 116
Query: 160 SCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLL 217
G+K+GGYL ++ + LCP + I I+ D++N+ +G + +S +E+ L+
Sbjct: 117 KSLGIKRGGYLNIVKRYVDLLCPVDKIPQCIKCDIANVSVGASIKISRLELPEGCNLV 174
>sp|Q4FVB4|RL25_PSYA2 50S ribosomal protein L25 OS=Psychrobacter arcticus (strain DSM
17307 / 273-4) GN=rplY PE=3 SV=1
Length = 224
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 23 TSYYHTIQAIPR--ECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTER 80
T + + A+ R E G S R R Q +PA+++ +Q ++
Sbjct: 2 TINHFALNAVDRSAEVQGKGASRRLRKQNLVPAIIYG-------------GGEQPIAISI 48
Query: 81 KQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVW 140
K I+ ++KS+E F S L + V+ D + R G ++ F
Sbjct: 49 K-INELVKSLEFEAFFSHILTLNVDGEEHQVVIKD--------LQRHPAKGFPMHADFQR 99
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
G ++ ++VPV F G E PG K GG L ++ T ++ +C + +E+DVS ++IG
Sbjct: 100 VVKGQKINMNVPVHFSGREEAPGTKAGGILSTLVTDIEIVCIPSQLPEYLEIDVSGMEIG 159
Query: 201 DRVFMSDIEV 210
D +SDI++
Sbjct: 160 DLFRLSDIKL 169
>sp|Q1QED5|RL25_PSYCK 50S ribosomal protein L25 OS=Psychrobacter cryohalolentis (strain
K5) GN=rplY PE=3 SV=1
Length = 224
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 24/188 (12%)
Query: 23 TSYYHTIQAIPR--ECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTER 80
T + + A+ R E G S R R Q +PA+++ P+ I
Sbjct: 2 TINHFALNAVDRSAELQGKGASRRLRKQNLVPAIIYG--------GGEQPTAISI----- 48
Query: 81 KQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVW 140
+I+ ++KS+E F S L + V+ D + R G ++ F
Sbjct: 49 -KINELVKSLEFEAFFSHILTLNVDGEEHQVVIKD--------LQRHPAKGFPMHADFQR 99
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
G ++ ++VPV F G E PG K GG L ++ T ++ +C + +E+DVS ++IG
Sbjct: 100 VVKGQKINMNVPVHFSGREEAPGTKAGGVLSTLVTDIEIVCIPSQLPEYLEIDVSGMEIG 159
Query: 201 DRVFMSDI 208
D +SDI
Sbjct: 160 DLFRLSDI 167
>sp|B2IG64|RL25_BEII9 50S ribosomal protein L25 OS=Beijerinckia indica subsp. indica
(strain ATCC 9039 / DSM 1715 / NCIB 8712) GN=rplY PE=3
SV=1
Length = 221
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 92/201 (45%), Gaps = 22/201 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R TG + R +GRIP V++ D P ++ + ++++ ++
Sbjct: 6 TLAATVRGGTGKGAARSIRREGRIPGVIYG------GGDAPEP-----ITLDYRELNKLI 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ F +T F +++ +V+P D G+ L++ F+ G L
Sbjct: 55 YAGH---FLTTIFDIEVEGAKQ--------RVVPRDYQLDPVKGQPLHVDFLRLKPGATL 103
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
KV VP+ F + CPGLKKGG L +R +++ PA+ + + D+ L+I + + +S
Sbjct: 104 KVSVPIHFINADICPGLKKGGTLNIVRHAIELKVPADAMPDVLTADLHALEIAESMHVSA 163
Query: 208 IEVHPSWKLLSKNEKMPLCKI 228
I + L++ + + I
Sbjct: 164 ITLPEGCSLVATDRDFTIATI 184
>sp|Q5GTJ0|RL25_WOLTR 50S ribosomal protein L25 OS=Wolbachia sp. subsp. Brugia malayi
(strain TRS) GN=rplY PE=3 SV=1
Length = 204
Score = 66.2 bits (160), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A R+ T ++ R +G IPAVV+ + N + S K+
Sbjct: 8 TINAELRDVTKTKAIRSLRKKGNIPAVVYGKG---HNNVNLTLSAKEFT----------- 53
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
K +L F + L I +++ D I+ H ++T I ++ F + D G+E+
Sbjct: 54 KQYKLGFLSAHVIELDISGKKEYALVRD------IQWHVVKDT--IQHVDFQFVDKGSEI 105
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
K+D+P+ F PG+K GG L + S+ C + I IEVD+S IG V +SD
Sbjct: 106 KIDIPLSFVNESKSPGIKLGGVLNVLCRSITVKCSPDKIPQAIEVDLSGKMIGQSVHISD 165
Query: 208 IEVHPSWKLLS-KNEKMPLCKISA 230
+++ KL + + E + ISA
Sbjct: 166 VKLPGGVKLAAHEEENFTVVTISA 189
>sp|Q5P9A5|RL25_ANAMM 50S ribosomal protein L25 OS=Anaplasma marginale (strain St.
Maries) GN=rplY PE=3 SV=1
Length = 218
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%)
Query: 130 TGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPK 189
+G + ++ F + D G E+KV+VP+VF + C G+K GG L + SL C + I
Sbjct: 88 SGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGALNILHRSLLIRCAPDAIPQS 147
Query: 190 IEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISAT 231
+EVD+ +L IG + +SD+ + + ++ K E + +SAT
Sbjct: 148 LEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIASVSAT 189
>sp|A7HVD8|RL25_PARL1 50S ribosomal protein L25 OS=Parvibaculum lavamentivorans (strain
DS-1 / DSM 13023 / NCIMB 13966) GN=rplY PE=3 SV=1
Length = 216
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 95/185 (51%), Gaps = 24/185 (12%)
Query: 27 HTIQAIPRECTGSRVSARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHS 85
T++A RE GS+ + R R GR+PAV++ D++SP ++++ K + +
Sbjct: 5 QTLKAEARE-KGSKGAVRSLRRAGRVPAVIYG--------DKQSP---ELIAVSYKDVSA 52
Query: 86 ILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGT 145
+ ++ F S ++I + +V+P V + I+++ F+
Sbjct: 53 LYQT---GTFMSHVLDVEIGG--------KTERVIPRDVQFEPVRDFIIHVDFLRLGKNA 101
Query: 146 ELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFM 205
+ VDVPV F E+ PG+K GG L +R ++ +CPA+ I ++++D++ ++G + +
Sbjct: 102 TVTVDVPVHFHNHEASPGIKAGGVLNIVRHEVELVCPADAIPEQLDIDLTGFEMGSSIHI 161
Query: 206 SDIEV 210
S +++
Sbjct: 162 SAVKL 166
>sp|B9KHC7|RL25_ANAMF 50S ribosomal protein L25 OS=Anaplasma marginale (strain Florida)
GN=rplY PE=3 SV=1
Length = 218
Score = 65.5 bits (158), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 58/102 (56%)
Query: 130 TGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPK 189
+G + ++ F + D G E+KV+VP+VF + C G+K GG L + SL C + I
Sbjct: 88 SGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGALNILHRSLLIRCAPDAIPQS 147
Query: 190 IEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNEKMPLCKISAT 231
+EVD+ +L IG + +SD+ + + ++ K E + +SAT
Sbjct: 148 LEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVVASVSAT 189
>sp|Q1RI71|RL25_RICBR 50S ribosomal protein L25 OS=Rickettsia bellii (strain RML369-C)
GN=rplY PE=3 SV=1
Length = 202
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G+ + R +GR+PA+++ +++P +S E K+I +
Sbjct: 7 LEAKSRNEFGTGAARALRREGRVPAIIYGA--------KKTPVS---ISLEEKEITKYYR 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I KVLP V T + ++ FV+ +D T+ K
Sbjct: 56 K---PAFISQLINLTIEG--------TQYKVLPKAVELHPVTDIVRHVDFVFLEDKTQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VPVV++G E G+K+GGY ++ + LC +I + +DV+N+ I + S +
Sbjct: 104 MEVPVVYEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKV 163
Query: 209 EVHPSWKLLSKNE 221
++ +K E
Sbjct: 164 KLPEGCSFTTKKE 176
>sp|A8GVL5|RL25_RICB8 50S ribosomal protein L25 OS=Rickettsia bellii (strain OSU 85-389)
GN=rplY PE=3 SV=1
Length = 202
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G+ + R +GR+PA+++ +++P +S E K+I +
Sbjct: 7 LEAKSRNEFGTGAARALRREGRVPAIIYGA--------KKTPVS---ISLEEKEITKYYR 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I KVLP V T + ++ FV+ +D T+ K
Sbjct: 56 K---PAFISQLINLTIEG--------TQYKVLPKAVELHPVTDIVRHVDFVFLEDKTQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VPVV++G E G+K+GGY ++ + LC +I + +DV+N+ I + S +
Sbjct: 104 MEVPVVYEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKV 163
Query: 209 EVHPSWKLLSKNE 221
++ +K E
Sbjct: 164 KLPEGCSFTTKKE 176
>sp|B3CTF9|RL25_ORITI 50S ribosomal protein L25 OS=Orientia tsutsugamushi (strain Ikeda)
GN=rplY PE=3 SV=1
Length = 207
Score = 64.7 bits (156), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 90/181 (49%), Gaps = 26/181 (14%)
Query: 42 SARD-RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTF 100
SAR R QG++P V++ + + +P + T K++ + + PFF ST
Sbjct: 19 SARALRRQGKVPGVIYKKGI--------TPIH---VCTLEKEVAKLYRK---PFFSSTVI 64
Query: 101 PLQIRAGSGSSVLLDSGKVLP--IKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGV 158
LQ+ KVLP +++H E ++ + V + G + KV VP+ F+G
Sbjct: 65 QLQVDD--------QRFKVLPKAVQLHPVTEFINHIDFILVEQNGGIQ-KVKVPISFEGK 115
Query: 159 ESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLS 218
+ G+K+GGYL ++ + LCP + I I+ D++N+ +G + +S +E+ L+
Sbjct: 116 DKSLGIKRGGYLNIVKRYVDLLCPVDKIPQCIKCDIANVPVGASIKVSRLELPEGCNLVK 175
Query: 219 K 219
+
Sbjct: 176 R 176
>sp|A8GP85|RL25_RICAH 50S ribosomal protein L25 OS=Rickettsia akari (strain Hartford)
GN=rplY PE=3 SV=1
Length = 199
Score = 64.7 bits (156), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A PR G+ + R +GR+PA+++ ++P +S E K +I K
Sbjct: 7 LEAKPRTEFGTGAARALRREGRVPAIIYGAG--------KTPVS---ISLEEK---AITK 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S + I KVLP V T + ++ FV+ + T+ K
Sbjct: 53 YYRKPAFISQLINVTIDQ--------KQYKVLPKAVELHPVTDMVRHVDFVFLEAKTQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VP+V++G E G+K+GGY ++ + LC +I + +DV+N+ I + S I
Sbjct: 104 MEVPIVYEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKI 163
Query: 209 EVHPSWKLLSKNE 221
E+ ++K E
Sbjct: 164 ELPKGCSFVTKKE 176
>sp|Q131L9|RL25_RHOPS 50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain
BisB5) GN=rplY PE=3 SV=1
Length = 234
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 2/112 (1%)
Query: 112 VLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGY 169
V+LD K V+P H D +++ F+ G ++V VP+ KG+ES PG+K+GG
Sbjct: 66 VVLDGKKHRVIPRDYHLDPVKDFPIHVDFLRLGAGATIRVSVPLHLKGLESAPGVKRGGT 125
Query: 170 LKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ ++ PAE I IE DVS LDIG + +SDI + K +S+ +
Sbjct: 126 FNIVTHTVDLEAPAESIPQFIEADVSTLDIGVSLHLSDIALPNGVKSVSRED 177
>sp|Q98HV7|RL25_RHILO 50S ribosomal protein L25 OS=Rhizobium loti (strain MAFF303099)
GN=rplY PE=3 SV=1
Length = 213
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 28/214 (13%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G++PAV++ D++ P + + I
Sbjct: 6 YELKAEAREQVGKGSARAVRRNGKVPAVIYG--------DKQPPLAIALTYKD------I 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK---VHRDEETGRILNLVFVWADD 143
+ F +T + + G VL ++ P+K VH D F+
Sbjct: 52 YYKIHGGGFLTTIATIDVD-GKKIQVLPKDFQLDPVKDFPVHVD----------FLRIGK 100
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
TE+ VDVPV F + PG+K+GG L +R +++ CPA I I +D++ +IGD +
Sbjct: 101 DTEVNVDVPVHFINEDKSPGIKRGGVLNIVRHEVEFHCPANAIPEFITIDLTGTNIGDSI 160
Query: 204 FMSDIEVHPSWKLLSKNEKMPLCKISATKLENPE 237
+S +++ K + + + I+ + PE
Sbjct: 161 HISAVQLPAGVKPVISDRDFTIATIAGSSAMKPE 194
>sp|B3Q7X4|RL25_RHOPT 50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain
TIE-1) GN=rplY PE=3 SV=1
Length = 230
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 112 VLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGY 169
V+LD K V+P H D +++ F+ G ++V VP+ KG+E PG+K+GG
Sbjct: 66 VVLDGKKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLKGLEVAPGVKRGGT 125
Query: 170 LKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ +++ PAE+I IE DVS LDIG + +SDI + K +S+++
Sbjct: 126 FNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKSVSRDD 177
>sp|Q6N1P8|RL25_RHOPA 50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain
ATCC BAA-98 / CGA009) GN=rplY PE=1 SV=3
Length = 230
Score = 64.3 bits (155), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 63/112 (56%), Gaps = 2/112 (1%)
Query: 112 VLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGY 169
V+LD K V+P H D +++ F+ G ++V VP+ KG+E PG+K+GG
Sbjct: 66 VVLDGKKHRVIPRDYHLDPVRDFPIHVDFLRLGAGATIRVSVPLHLKGLEVAPGVKRGGT 125
Query: 170 LKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWKLLSKNE 221
+ +++ PAE+I IE DVS LDIG + +SDI + K +S+++
Sbjct: 126 FNIVTHTVELEAPAENIPQFIEADVSTLDIGVSLHLSDIALPTGVKSVSRDD 177
>sp|Q2ISF7|RL25_RHOP2 50S ribosomal protein L25 OS=Rhodopseudomonas palustris (strain
HaA2) GN=rplY PE=3 SV=1
Length = 240
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 69/126 (54%), Gaps = 6/126 (4%)
Query: 102 LQIRAG----SGSSVLLDSGK--VLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVF 155
L+I+AG + V+LD K V+P H D +++ F+ +G +++ VP+
Sbjct: 52 LRIQAGRFLTTIFDVVLDGQKHRVIPRDYHLDPVKDFPVHVDFLRLGEGATIRISVPLHL 111
Query: 156 KGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPSWK 215
KG+ES PG+K+GG + ++ PA+ I IE DVS LDIG + +SDI + K
Sbjct: 112 KGLESAPGVKRGGTFNIVTHTVDLEAPADAIPQFIEADVSTLDIGVSLHLSDIALPKGVK 171
Query: 216 LLSKNE 221
+S+ +
Sbjct: 172 SVSRED 177
>sp|Q4UMK5|RL25_RICFE 50S ribosomal protein L25 OS=Rickettsia felis (strain ATCC VR-1525
/ URRWXCal2) GN=rplY PE=3 SV=1
Length = 203
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 89/193 (46%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G+ S R +GR+PA+++ ++P +S E K+I +
Sbjct: 7 LEAKSRTEFGTGASRALRREGRVPAIIYGAG--------KTPVS---ISLEEKEITKYYR 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I KVLP V T + ++ FV+ ++ T+ K
Sbjct: 56 K---PAFISQLINLTIDK--------KKYKVLPKAVELHPVTDIVRHVDFVFLEEKTQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VPVV++G E G+K+GGY ++ + LC +I + +DV+N+ I + S I
Sbjct: 104 MEVPVVYEGKERALGVKRGGYFNIVKRRVTLLCDVNNIPRNVTIDVTNMPIATSLKSSKI 163
Query: 209 EVHPSWKLLSKNE 221
E+ +K E
Sbjct: 164 ELPKGCSFTTKKE 176
>sp|C0R595|RL25_WOLWR 50S ribosomal protein L25 OS=Wolbachia sp. subsp. Drosophila
simulans (strain wRi) GN=rplY PE=3 SV=1
Length = 203
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 39/220 (17%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A R+ T ++ R +G IP +++ + + N L+ K+
Sbjct: 8 TINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVN-----------LTLSAKE----- 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLD---SGK-----VLPIKVHRDEETGRILNLVFV 139
F Q ++GS S+ L++ SGK V I++H ++T + ++ F
Sbjct: 52 ------------FTKQYKSGSLSAHLIELNISGKKEYALVRDIQLHVVKDT--VQHVDFQ 97
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
+ D G+E+K+D+P+ F PG+K GG L + S+ C + I IEVD+S I
Sbjct: 98 FVDKGSEIKIDIPLSFVNESKAPGIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMI 157
Query: 200 GDRVFMSDIEVHPSWKLLS-KNEKMPLCKISATKLENPEP 238
G + ++D+++ K ++ + E + ISA + EP
Sbjct: 158 GQSIHINDVKLPEGVKFVAHEEENFTIVTISAADSDVEEP 197
>sp|Q73II9|RL25_WOLPM 50S ribosomal protein L25 OS=Wolbachia pipientis wMel GN=rplY PE=3
SV=1
Length = 203
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 102/220 (46%), Gaps = 39/220 (17%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
TI A R+ T ++ R +G IP +++ + + N L+ K+
Sbjct: 8 TINAELRDITKTKAMHSLRKKGNIPGIIYGKGHDNVN-----------LTLSAKE----- 51
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLD---SGK-----VLPIKVHRDEETGRILNLVFV 139
F Q ++GS S+ L++ SGK V I++H ++T + ++ F
Sbjct: 52 ------------FTKQYKSGSLSAHLIELNISGKKEYALVRDIQLHVVKDT--VQHVDFQ 97
Query: 140 WADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDI 199
+ D G+E+K+D+P+ F PG+K GG L + S+ C + I IEVD+S I
Sbjct: 98 FVDKGSEIKIDIPLSFVNESKAPGIKLGGVLNVLCRSIAVKCSPDKIPQVIEVDLSGKMI 157
Query: 200 GDRVFMSDIEVHPSWKLLS-KNEKMPLCKISATKLENPEP 238
G + ++D+++ K ++ + E + ISA + EP
Sbjct: 158 GQSIHINDVKLPEGVKFVAHEEENFTIVTISAADSDVEEP 197
>sp|Q31IN4|RL25_THICR 50S ribosomal protein L25 OS=Thiomicrospira crunogena (strain
XCL-2) GN=rplY PE=3 SV=1
Length = 193
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 90/183 (49%), Gaps = 21/183 (11%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R G S R R G++PA+++ D+ D +S ++ + QI LK +++
Sbjct: 10 RTEEGKGASRRLRHAGKVPAIIYGGDV-----DAKS------IALKSNQIERALK-LDVD 57
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
+ S L+ G+G D+ + + R TG I ++ F A D + VP+
Sbjct: 58 LYNSV-LTLE---GAG-----DAENCIIKDLQRHPATGFITHIDFQRASDKAMVTKRVPL 108
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVHPS 213
FKG ES PG+K GG + ++T+++ C A+ + I+VDVS L+ G + +S + +
Sbjct: 109 KFKGKESSPGVKMGGLMSFMQTTVEVSCLAKDLPTAIDVDVSELEAGTNLRLSQLTLPKG 168
Query: 214 WKL 216
KL
Sbjct: 169 VKL 171
>sp|Q4FPH0|RL25_PELUB 50S ribosomal protein L25 OS=Pelagibacter ubique (strain HTCC1062)
GN=rplY PE=3 SV=1
Length = 228
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 22/166 (13%)
Query: 46 RSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELPFFCSTTFPLQIR 105
RS G IP +++ P + Q ++ +K + S+ ++ F S L +
Sbjct: 21 RSAGNIPGIIYG-----------GPDQNQKVTVLKKTLKSL---IDKGSFLSNIITLNLD 66
Query: 106 AGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPVVFKGVESCPGLK 165
G +VL + + V DE T ++ F+ G +++++VPVVF E+ PGLK
Sbjct: 67 -GKPQNVL---PREITYNVISDEPT----HIDFLRVVPGVKIRIEVPVVFINHETSPGLK 118
Query: 166 KGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEVH 211
+GG L +R ++ CP+E I I +D+ +DIG+ +S +++
Sbjct: 119 RGGVLNIVRRKIELKCPSEKIPSAITIDLDGVDIGESFKISSVKLE 164
>sp|Q2GII5|RL25_ANAPZ 50S ribosomal protein L25 OS=Anaplasma phagocytophilum (strain HZ)
GN=rplY PE=3 SV=1
Length = 211
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 94/203 (46%), Gaps = 22/203 (10%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A RE G+ + R++G IPAV++ ++ R P ++ Q+ + K
Sbjct: 9 VDASVRERCGTGSARALRARGLIPAVIYGKN--------RDP-----INISLSQVDFLKK 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I + D + + +G I ++ F + D E+K
Sbjct: 56 CRTFPIF-SKLIELCIGEKKEYVITKD--------IQKHPVSGAIAHVDFQFVDQDAEMK 106
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VP+VF + C G+K+GG + + SL C HI +EVD+ ++ IG + +SD+
Sbjct: 107 MEVPLVFLNEQKCVGVKRGGVINILHRSLIIRCSPHHIPKSLEVDLIDVAIGHSLHVSDL 166
Query: 209 EVHPSWKLLSKNEKMPLCKISAT 231
++ + ++ K E + + A+
Sbjct: 167 KLPSTINVVMKEEDPVIATVVAS 189
>sp|Q9ZCV3|RL25_RICPR 50S ribosomal protein L25 OS=Rickettsia prowazekii (strain Madrid
E) GN=rplY PE=3 SV=1
Length = 203
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 87/193 (45%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G+ + R +GR+PA+++ K S K+I RK
Sbjct: 7 LEAKSRTEFGTGAARALRREGRVPAIIYGAG---KTPISISLKEKEITKYYRK------- 56
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I KVLP V T + ++ FV+ + T+ K
Sbjct: 57 ----PAFISQLINLTIDK--------KQYKVLPKAVELHPVTDIVRHVDFVFLEAKTQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VP+V++G E G+K+GGY I+ + LC +I + +DV+N+ IG + S +
Sbjct: 104 MEVPIVYEGKERALGVKRGGYFNIIKRRVILLCDVNNIPRNVTIDVTNMPIGTSLKSSQV 163
Query: 209 EVHPSWKLLSKNE 221
E+ ++K E
Sbjct: 164 ELPKGCSFITKKE 176
>sp|Q0ARN7|RL25_MARMM 50S ribosomal protein L25 OS=Maricaulis maris (strain MCS10)
GN=rplY PE=3 SV=1
Length = 215
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 49/79 (62%)
Query: 132 RILNLVFVWADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIE 191
+ +++ D+ T++ V+V V F ++CP LK+GG L +R ++ LCPA I +E
Sbjct: 88 KAMHIDLYRVDEDTKINVNVAVNFTNEDACPALKRGGVLNIVRHDVELLCPAGSIPESVE 147
Query: 192 VDVSNLDIGDRVFMSDIEV 210
D++ LDIGD + +S I++
Sbjct: 148 ADLTGLDIGDSLHISAIKL 166
>sp|A5ILV5|RL25_THEP1 50S ribosomal protein L25 OS=Thermotoga petrophila (strain RKU-1 /
ATCC BAA-488 / DSM 13995) GN=rplY PE=3 SV=1
Length = 214
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 100/197 (50%), Gaps = 21/197 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
+++A RE G R + R R G +PAVV+ P+ + I ++ S+L
Sbjct: 3 SLEARVREVKGKREARRLRRNGEVPAVVYG------------PATEPIPVKIKR---SVL 47
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIK-VHRDEETGRILNLVFVWADDGTE 146
+ V +T L I+ G++V S K + +K + RD+ + +++L F G
Sbjct: 48 EKVFHTISEATPIQLIIKDDQGNTV---SEKTVFLKMIQRDKVSETVVHLDFYEPTKGHR 104
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
++++VP K V G++KGG+L+ + +++ +IEVDVS+LD+GD ++
Sbjct: 105 MRINVP--LKVVGKPVGVEKGGFLEVFHEEIPVETDPDNVPQEIEVDVSSLDLGDVIYAR 162
Query: 207 DIEVHPSWKLLSKNEKM 223
D+++ K L +E++
Sbjct: 163 DLKLPEGVKCLLGDEEV 179
>sp|A5WHA5|RL25_PSYWF 50S ribosomal protein L25 OS=Psychrobacter sp. (strain PRwf-1)
GN=rplY PE=3 SV=1
Length = 224
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 86/190 (45%), Gaps = 24/190 (12%)
Query: 23 TSYYHTIQAIPR--ECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTER 80
+ +T+ I R + G S R R Q +PA+++ + P+ I E
Sbjct: 2 SDILYTVNGITRTNDQQGKGASRRLRKQNLVPAIIYGGN--------EEPTAIAIKKNE- 52
Query: 81 KQIHSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVW 140
+ K +E F S + + +V+ D + R G ++ F
Sbjct: 53 -----LWKLLENEAFFSNILTINLEGEEHLAVIKD--------LQRHPSKGFAMHADFQR 99
Query: 141 ADDGTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIG 200
G ++ + +P+ F G E PG+K GG L ++ T ++ +C ++ +EVDVSNL+IG
Sbjct: 100 IVKGQKINMQIPLHFTGREEAPGIKAGGILSTLVTDIEIVCLPSNLPEFLEVDVSNLEIG 159
Query: 201 DRVFMSDIEV 210
+ + ++DI++
Sbjct: 160 ESLHLTDIKL 169
>sp|A5V625|RL25_SPHWW 50S ribosomal protein L25 OS=Sphingomonas wittichii (strain RW1 /
DSM 6014 / JCM 10273) GN=rplY PE=3 SV=1
Length = 207
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 92/206 (44%), Gaps = 31/206 (15%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
+ A RE G S R +GR+PAV++ + ++ P+ + E K + +L
Sbjct: 7 LSAEARERAGKGASRAIRREGRVPAVIYGE--------KQEPAS---IHVEEKVLMKLLH 55
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSG----KVLPIKVHRDEETGRILNLVFVWADDG 144
+ FF S V+LD G + LP V T R L++ F+ +
Sbjct: 56 TGH--FFNSV-------------VMLDVGGKKVRTLPKDVQFHPVTDRPLHVDFLRIGEH 100
Query: 145 TELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVF 204
T++ V+VPV FK E PGLK+GG L + L A I +I + + L++G+ +
Sbjct: 101 TKVNVNVPVHFKDEELSPGLKRGGVLNVVIHDLGLSVDAAEIPEEIVISLKGLEVGESIH 160
Query: 205 MSDIEVHPSWKLLSKNEKMPLCKISA 230
+S + + P +E + + I A
Sbjct: 161 LSQVAL-PKGASAQDHEDITIATIVA 185
>sp|A6UBR5|RL25_SINMW 50S ribosomal protein L25 OS=Sinorhizobium medicae (strain WSM419)
GN=rplY PE=3 SV=1
Length = 207
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A RE G S R G IPAV++ + P LST+
Sbjct: 2 SETYELKAETRERVGKGSSRELRRNGLIPAVIYGD---------KQPPLSIALSTK---- 48
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
+ + F +T + + G + +VLP D +++ F+
Sbjct: 49 -DVTMKIHAGGFMTTVATIDV---DGKKI-----RVLPKDYQLDPVRDFTMHVDFLRVKK 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G+++ V VPV F+ E PGLK+GG L +R ++ A++I + VD++ L IGD V
Sbjct: 100 GSQVSVQVPVRFENEEKSPGLKQGGALNIVRHEVELNVSADNIPEFLTVDLTGLKIGDTV 159
Query: 204 FMSDIEV 210
+S++E+
Sbjct: 160 HISNVEL 166
>sp|Q68WD3|RL25_RICTY 50S ribosomal protein L25 OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=rplY PE=3 SV=1
Length = 203
Score = 61.2 bits (147), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 23/193 (11%)
Query: 29 IQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILK 88
++A R G+ + R +GR+PA+++ + + +S E K+I K
Sbjct: 7 LEAKSRTEFGTGAARALRREGRVPAIIYGAGKIPIS-----------ISLEEKEIT---K 52
Query: 89 SVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELK 148
P F S L I KVLP V T + ++ FV+ + T+ K
Sbjct: 53 YYRRPAFISQLINLTIDK--------KQYKVLPKAVELHPVTDIVRHVDFVFLEAKTQ-K 103
Query: 149 VDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDI 208
++VPVV++G E G+K+GGY I+ + LC +I + +DV+N+ IG + S++
Sbjct: 104 MEVPVVYEGKERALGVKRGGYFNIIKRRVILLCDINNIPRNVTIDVTNMPIGTSLKSSEV 163
Query: 209 EVHPSWKLLSKNE 221
++ ++K E
Sbjct: 164 KLPIGCSFVTKKE 176
>sp|Q2K5U4|RL25_RHIEC 50S ribosomal protein L25 OS=Rhizobium etli (strain CFN 42 / ATCC
51251) GN=rplY PE=3 SV=2
Length = 204
Score = 61.2 bits (147), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 80/182 (43%), Gaps = 22/182 (12%)
Query: 27 HTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSI 86
+ ++A RE G + R G IPAV++ D+++P I + E +
Sbjct: 6 YELKAEARERVGKGSARELRRNGLIPAVIYG--------DKQAPIAIAINTNE------V 51
Query: 87 LKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTE 146
K + F +T +++ KVLP D L++ F+ T+
Sbjct: 52 TKRIHAGGFMTTVATIEVDG--------KKHKVLPKDYQLDPVRDFTLHVDFLRVSGNTQ 103
Query: 147 LKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMS 206
+ V++PV F PGLK GG L +R ++ CPA+ I +D+S IGD + +S
Sbjct: 104 VTVEIPVHFINEAKSPGLKVGGVLNIVRHEVEVHCPADAIPEFFNIDLSGKKIGDSIHIS 163
Query: 207 DI 208
++
Sbjct: 164 EV 165
>sp|Q92N68|RL25_RHIME 50S ribosomal protein L25 OS=Rhizobium meliloti (strain 1021)
GN=rplY PE=3 SV=1
Length = 204
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R+ G S R G IPAV++ + P LST+
Sbjct: 2 SETYELKAETRDRVGKGSSRELRRNGLIPAVIYGD---------KQPPLSIALSTK---- 48
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
+ + F +T + + +G + +VLP D +++ F+
Sbjct: 49 -DVTMKIHAGGFMTTVATIDV---NGEKI-----RVLPKDYQLDPVRDFTMHVDFLRVSK 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
G+++ V VPV F+ E PGLK+GG L +R ++ A++I + VD++ L IGD V
Sbjct: 100 GSQVSVQVPVHFENEEKSPGLKQGGALNIVRHEVELNVSADNIPESLTVDLTGLKIGDTV 159
Query: 204 FMSDIEV 210
+S++++
Sbjct: 160 HISNVKL 166
>sp|B0T899|RL25_CAUSK 50S ribosomal protein L25 OS=Caulobacter sp. (strain K31) GN=rplY
PE=3 SV=1
Length = 199
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 22/177 (12%)
Query: 34 RECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSILKSVELP 93
R+ G+ S R QG++P V++ L N + ++ L T + H +
Sbjct: 11 RDRAGTGGSRETRRQGKVPGVLYGGPLAPVNIAVKGNEFRKALHTGKLLGHLVT------ 64
Query: 94 FFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTELKVDVPV 153
LQ SV+ + + P+ T L+ D+ +K+++PV
Sbjct: 65 --------LQ-HGDEKQSVIAKAVQFHPV-------TDEPLHFDLYRVDEHQLIKIEIPV 108
Query: 154 VFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSDIEV 210
FK + GLKKGG L+ IR +++ CPA+ I ++ +D+++ DIGD + +S+I++
Sbjct: 109 HFKNHDISVGLKKGGTLEIIRHTVELACPADKIPEELVIDLASHDIGDTIRISEIKL 165
>sp|Q2RMV5|RL25_RHORT 50S ribosomal protein L25 OS=Rhodospirillum rubrum (strain ATCC
11170 / NCIB 8255) GN=rplY PE=3 SV=1
Length = 210
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 28 TIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQIHSIL 87
T+ A R+ G + R +G++PAV++ R+ P +LS + IH+ +
Sbjct: 6 TLSAKGRDRAGKGAARATRREGQVPAVIYG--------GRQDPV---LLSLAPRLIHTEM 54
Query: 88 KSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADDGTEL 147
+ F S F L + G V++ + P+ T +++ F+ TE+
Sbjct: 55 RKAG---FSSRLFDLTVEGGETHRVMVQDVQFHPV-------TDMPIHVDFLRIGKDTEV 104
Query: 148 KVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRVFMSD 207
V +PV F + PGLK+GG L +R ++ + + EVD++ ++GD + +
Sbjct: 105 TVAIPVHFINETASPGLKRGGVLNVVRHEIEVHGRPDALPDFFEVDLTGAEVGDSIHVGV 164
Query: 208 IEVHPSWKLLSKNEKMPLCKISA 230
+++ + + +C I+A
Sbjct: 165 VKIPEGVRPVIAERDFTICTIAA 187
>sp|Q8FZE8|RL25_BRUSU 50S ribosomal protein L25 OS=Brucella suis biovar 1 (strain 1330)
GN=rplY PE=3 SV=1
Length = 207
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 2 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 50 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E+D+S L+IGD V
Sbjct: 100 KSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSV 159
Query: 204 FMSDIEV 210
+S +++
Sbjct: 160 HISAVKL 166
>sp|B0CHX4|RL25_BRUSI 50S ribosomal protein L25 OS=Brucella suis (strain ATCC 23445 /
NCTC 10510) GN=rplY PE=3 SV=1
Length = 207
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 2 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 50 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E+D+S L+IGD V
Sbjct: 100 KSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSV 159
Query: 204 FMSDIEV 210
+S +++
Sbjct: 160 HISAVKL 166
>sp|Q8YIG3|RL25_BRUME 50S ribosomal protein L25 OS=Brucella melitensis biotype 1 (strain
16M / ATCC 23456 / NCTC 10094) GN=rplY PE=3 SV=2
Length = 207
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 2 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 50 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E+D+S L+IGD V
Sbjct: 100 KSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSV 159
Query: 204 FMSDIEV 210
+S +++
Sbjct: 160 HISAVKL 166
>sp|C0REH1|RL25_BRUMB 50S ribosomal protein L25 OS=Brucella melitensis biotype 2 (strain
ATCC 23457) GN=rplY PE=3 SV=1
Length = 207
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 2 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 50 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E+D+S L+IGD V
Sbjct: 100 KSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSV 159
Query: 204 FMSDIEV 210
+S +++
Sbjct: 160 HISAVKL 166
>sp|Q57BY2|RL25_BRUAB 50S ribosomal protein L25 OS=Brucella abortus biovar 1 (strain
9-941) GN=rplY PE=3 SV=1
Length = 207
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 2 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 50 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E+D+S L+IGD V
Sbjct: 100 KSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSV 159
Query: 204 FMSDIEV 210
+S +++
Sbjct: 160 HISAVKL 166
>sp|Q2YLX6|RL25_BRUA2 50S ribosomal protein L25 OS=Brucella abortus (strain 2308) GN=rplY
PE=3 SV=1
Length = 207
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 2 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 50 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E+D+S L+IGD V
Sbjct: 100 KSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSV 159
Query: 204 FMSDIEV 210
+S +++
Sbjct: 160 HISAVKL 166
>sp|B2S6Z6|RL25_BRUA1 50S ribosomal protein L25 OS=Brucella abortus (strain S19) GN=rplY
PE=3 SV=1
Length = 207
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 2 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 50 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E+D+S L+IGD V
Sbjct: 100 KSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSV 159
Query: 204 FMSDIEV 210
+S +++
Sbjct: 160 HISAVKL 166
>sp|A9M6K0|RL25_BRUC2 50S ribosomal protein L25 OS=Brucella canis (strain ATCC 23365 /
NCTC 10854) GN=rplY PE=3 SV=1
Length = 207
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 86/187 (45%), Gaps = 22/187 (11%)
Query: 24 SYYHTIQAIPRECTGSRVSARDRSQGRIPAVVFAQDLLDKNTDRRSPSRKQILSTERKQI 83
S + ++A R G S R G+IPAV++ D++ P + E
Sbjct: 2 SETYVLKADLRTRVGKGSSRELRRNGQIPAVIYG--------DKQEPLAIAVSYKE---- 49
Query: 84 HSILKSVELPFFCSTTFPLQIRAGSGSSVLLDSGKVLPIKVHRDEETGRILNLVFVWADD 143
I + F +T +++ G + +VLP D ++ F+
Sbjct: 50 --IFYKIHGGGFKTTVATIEV---DGKKI-----QVLPKDYQLDPVRDFPQHVDFLRVSA 99
Query: 144 GTELKVDVPVVFKGVESCPGLKKGGYLKSIRTSLKYLCPAEHISPKIEVDVSNLDIGDRV 203
+ + V+VPV FK E+ PG+K+GG L +R ++ + PA I +E+D+S L+IGD V
Sbjct: 100 KSVVHVNVPVHFKNEEAAPGIKRGGVLNVVRHDVELIVPANAIPEALEIDLSGLEIGDSV 159
Query: 204 FMSDIEV 210
+S +++
Sbjct: 160 HISAVKL 166
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,963,263
Number of Sequences: 539616
Number of extensions: 3682931
Number of successful extensions: 7997
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 246
Number of HSP's successfully gapped in prelim test: 141
Number of HSP's that attempted gapping in prelim test: 7513
Number of HSP's gapped (non-prelim): 449
length of query: 241
length of database: 191,569,459
effective HSP length: 114
effective length of query: 127
effective length of database: 130,053,235
effective search space: 16516760845
effective search space used: 16516760845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)