Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>026234
MGKRKRGDANNPIDIVSSTPEDPGHLSKHRTCWLHTVAFLHARKMKISKQKIRNFELTAP
CFLGTFSCRRRSKRRVKCKNTSLIKGKNSSSVKCKDMITKRKKNKLDSGKFEHLLDNLWR
SFSEDKKAGFTYLDSLWFDLYRKPSSKAKVLTWIKRKHIFSKKYVLVPIVCWRHWNLLIL
CNFGGSFESKTRTPCMLLLDSLEMSNPWRFEPDIRKYVTLYFFGVFVCLCTSIIVSVYCT
S

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  026234
        (241 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2101130 - symbol:AT3G48480 species:3702 "Arabi...   364  2.0e-33   1
DICTYBASE|DDB_G0293508 - symbol:DDB_G0293508 species:4468...   145  2.5e-07   1


>TAIR|locus:2101130 [details] [associations]
            symbol:AT3G48480 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR003653 Pfam:PF02902 PROSITE:PS50600
            EMBL:CP002686 GO:GO:0008234 GO:GO:0006508 IPI:IPI00944269
            RefSeq:NP_190417.4 UniGene:At.53833 ProteinModelPortal:F4JF18
            SMR:F4JF18 EnsemblPlants:AT3G48480.1 GeneID:824007
            KEGG:ath:AT3G48480 OMA:VFVPIVC Uniprot:F4JF18
        Length = 298

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 86/210 (40%), Positives = 118/210 (56%)

Query:    13 IDIVSSTPEDPGHLSKHRTCWLHTVAFLHARKMKISKQK-IRNFELTAPCFLGTFXXXXX 71
             + I+    ED  +L  HRTCW H  A L     K  + K +  F+LTAPCF         
Sbjct:    23 VTIIDDCEEDE-YLH-HRTCWKHIAAALSKCGSKPKRTKELEIFKLTAPCFYDECTR--- 77

Query:    72 XXXXXXXXNTSLIKGKNSSSVKCKDMITKRKKNKLDSGKFEHLLDNLWRSFSEDKKAGFT 131
                          +G++   +KCK + +K +K KL+S  F   L+++WR FS++KK  F 
Sbjct:    78 -------------RGRSERRIKCKYLDSKLRK-KLNSKAFVGYLEDVWRGFSDEKKNSFV 123

Query:   132 YLDSLWFDLYRKPSS--KAKVLTWIKRKHIFSKKYVLVPIVCWRHWNLLILCNFGGSFES 189
             YLD LWF +Y+  +   ++ V   +K K IFSKKYV +PIV W HW LLI CNFG   +S
Sbjct:   124 YLDCLWFSMYKSENHNIRSSVFDSVKTKQIFSKKYVFLPIVYWSHWTLLIFCNFGEDLDS 183

Query:   190 KTRTPCMLLLDSLEMSNP-WRFEPDIRKYV 218
               +T CML LDSL+ ++   R EPDIRK+V
Sbjct:   184 D-KT-CMLFLDSLQTTDSSQRLEPDIRKFV 211


>DICTYBASE|DDB_G0293508 [details] [associations]
            symbol:DDB_G0293508 species:44689 "Dictyostelium
            discoideum" [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR003653 Pfam:PF02902 PROSITE:PS50600
            dictyBase:DDB_G0293508 GO:GO:0008234 GO:GO:0006508 eggNOG:COG5160
            EMBL:AAFI02000217 KO:K08596 RefSeq:XP_629102.1
            ProteinModelPortal:Q54BQ0 MEROPS:C48.A17 EnsemblProtists:DDB0191980
            GeneID:8629261 KEGG:ddi:DDB_G0293508 InParanoid:Q54BQ0
            Uniprot:Q54BQ0
        Length = 1035

 Score = 145 (56.1 bits), Expect = 2.5e-07, P = 2.5e-07
 Identities = 33/107 (30%), Positives = 60/107 (56%)

Query:   123 SEDKKAGFTYLDSLWFDLYRKPSSK----AKVLTWIKRKHIFSKKYVLVPIVCWRHWNLL 178
             +E+++  + + +S ++ L+    ++      V  W  ++ +FSK ++ VPI    HW+L+
Sbjct:   474 TEEQRKKYFFFNSFFYKLFTNEDNENLAYEDVKKWTGKEDLFSKDFIFVPINYAAHWSLM 533

Query:   179 ILCNFG-----GSFESKTRTPCMLLLDSLEMSNPWRFEPDIRKYVTL 220
             I+C  G     G +E   ++PCM+ LDSL    P +F   +RKY+TL
Sbjct:   534 IICYPGADKVVGEYE---KSPCMIYLDSL-FKRPGQFANKLRKYLTL 576


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.325   0.137   0.448    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      241       228   0.00081  113 3  11 22  0.48    32
                                                     32  0.41    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  610 (65 KB)
  Total size of DFA:  208 KB (2116 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  20.12u 0.19s 20.31t   Elapsed:  00:00:01
  Total cpu time:  20.12u 0.19s 20.31t   Elapsed:  00:00:01
  Start:  Fri May 10 04:01:49 2013   End:  Fri May 10 04:01:50 2013

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