BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026236
(241 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2QZ86|ACLA2_ORYSJ ATP-citrate synthase alpha chain protein 2 OS=Oryza sativa subsp.
japonica GN=ACLA-2 PE=2 SV=2
Length = 423
Score = 471 bits (1212), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/240 (92%), Positives = 233/240 (97%)
Query: 2 GVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVL 61
GVFAVFQDLDFSF+EMNPFT+VNGEPYPLDMRGELDDTAAFKNFKKW NIEFPLPFGRVL
Sbjct: 184 GVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGELDDTAAFKNFKKWGNIEFPLPFGRVL 243
Query: 62 SSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAE 121
SSTE FIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAE
Sbjct: 244 SSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAE 303
Query: 122 YSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKES 181
YSGAPNEEEVLQYARVV+DCATADPDGRKRALLIGGGIANFTDV TF+GIIRALREKES
Sbjct: 304 YSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVGATFSGIIRALREKES 363
Query: 182 KLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSAS 241
KLKAARMHI+VRRGGPNYQTGLAKMR LG ELG+P+EVYGPEATMTGICKQAI+C+M+A+
Sbjct: 364 KLKAARMHIYVRRGGPNYQTGLAKMRKLGAELGVPIEVYGPEATMTGICKQAIECVMAAA 423
>sp|O80526|ACLA3_ARATH ATP-citrate synthase alpha chain protein 3 OS=Arabidopsis thaliana
GN=ACLA-3 PE=2 SV=1
Length = 424
Score = 468 bits (1203), Expect = e-131, Method: Compositional matrix adjust.
Identities = 220/238 (92%), Positives = 232/238 (97%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRV 60
MG FAVFQDLDFSF+EMNPFTLV+GEP+PLDMRGELDDTAAFKNF KW +IEFPLPFGRV
Sbjct: 183 MGAFAVFQDLDFSFMEMNPFTLVDGEPFPLDMRGELDDTAAFKNFNKWGDIEFPLPFGRV 242
Query: 61 LSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYA 120
LSSTE+FIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYA
Sbjct: 243 LSSTENFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYA 302
Query: 121 EYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKE 180
EYSGAPNEEEVLQYARVVIDCAT DPDGRKRALLIGGGIANFTDVA TFNGIIRALREKE
Sbjct: 303 EYSGAPNEEEVLQYARVVIDCATTDPDGRKRALLIGGGIANFTDVAATFNGIIRALREKE 362
Query: 181 SKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIM 238
++LKA+RMHI+VRRGGPNYQTGLA+MRALGEELG+PLEVYGPEATMTGICK+AIDCIM
Sbjct: 363 TRLKASRMHIYVRRGGPNYQTGLARMRALGEELGVPLEVYGPEATMTGICKRAIDCIM 420
>sp|Q2QNG7|ACLA3_ORYSJ ATP-citrate synthase alpha chain protein 3 OS=Oryza sativa subsp.
japonica GN=ACLA-3 PE=2 SV=1
Length = 423
Score = 466 bits (1198), Expect = e-131, Method: Compositional matrix adjust.
Identities = 218/238 (91%), Positives = 232/238 (97%)
Query: 2 GVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVL 61
GV++VFQDLDFSF+EMNPFT+VNGEPYPLDMRGELDDTAAFKNFKKW NI+FPLPFGRVL
Sbjct: 184 GVYSVFQDLDFSFLEMNPFTMVNGEPYPLDMRGELDDTAAFKNFKKWGNIQFPLPFGRVL 243
Query: 62 SSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAE 121
S +ESFIH LDEKTS+SLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAE
Sbjct: 244 SPSESFIHELDEKTSSSLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAE 303
Query: 122 YSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKES 181
YSGAPNEEEVLQYARVV+DCATADPDGRKRALLIGGGIANFTDVA TF+GIIRALREKES
Sbjct: 304 YSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVAATFSGIIRALREKES 363
Query: 182 KLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMS 239
KLKAARM+I+VRRGGPNYQTGLAKMR LG ELG+P+EVYGPEATMTGICKQAIDCIM+
Sbjct: 364 KLKAARMNIYVRRGGPNYQTGLAKMRTLGAELGVPIEVYGPEATMTGICKQAIDCIMA 421
>sp|O22718|ACLA2_ARATH ATP-citrate synthase alpha chain protein 2 OS=Arabidopsis thaliana
GN=ACLA-2 PE=2 SV=1
Length = 423
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 205/239 (85%), Positives = 229/239 (95%)
Query: 3 VFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLS 62
+F +F+DLDF+F+EMNPFTLV+G+PYPLDMRGELDDTAAFKNFKKW +IEFP+PFGRV+S
Sbjct: 185 IFTLFEDLDFTFLEMNPFTLVDGKPYPLDMRGELDDTAAFKNFKKWGDIEFPMPFGRVMS 244
Query: 63 STESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEY 122
STESFIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEY
Sbjct: 245 STESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEY 304
Query: 123 SGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESK 182
SGAP E+EVLQYARVVIDCATA+PDG+ RAL+IGGGIANFTDVA TFNGIIRAL+EKE+K
Sbjct: 305 SGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGIANFTDVAATFNGIIRALKEKEAK 364
Query: 183 LKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSAS 241
LKAARMHIFVRRGGPNYQ GLAKMR+LG+E+G+P+EVYGPEATMTGICK+AI I +A+
Sbjct: 365 LKAARMHIFVRRGGPNYQKGLAKMRSLGDEIGVPIEVYGPEATMTGICKEAIQYITAAA 423
>sp|Q9SGY2|ACLA1_ARATH ATP-citrate synthase alpha chain protein 1 OS=Arabidopsis thaliana
GN=ACLA-1 PE=1 SV=1
Length = 423
Score = 442 bits (1136), Expect = e-123, Method: Compositional matrix adjust.
Identities = 206/239 (86%), Positives = 227/239 (94%)
Query: 3 VFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVLS 62
+F +FQDLDF+F+EMNPFTLV+G PYPLDMRGELDDTAAFKNFKKW +IEFPLPFGRV+S
Sbjct: 185 IFTLFQDLDFTFLEMNPFTLVDGSPYPLDMRGELDDTAAFKNFKKWGDIEFPLPFGRVMS 244
Query: 63 STESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEY 122
TESFIH LDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEY
Sbjct: 245 PTESFIHGLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAEY 304
Query: 123 SGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKESK 182
SGAP E+EVLQYARVVIDCATA+PDG+ RAL+IGGGIANFTDVA TFNGIIRAL+EKE+K
Sbjct: 305 SGAPKEDEVLQYARVVIDCATANPDGKSRALVIGGGIANFTDVAATFNGIIRALKEKEAK 364
Query: 183 LKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSAS 241
LKAARMHIFVRRGGPNYQ GLAKMRALG+++G+P+EVYGPEATMTGICK+AI I +A+
Sbjct: 365 LKAARMHIFVRRGGPNYQKGLAKMRALGDDIGVPIEVYGPEATMTGICKEAIQYITAAA 423
>sp|Q53JY8|ACLA1_ORYSJ ATP-citrate synthase subunit alpha chain protein 1 OS=Oryza sativa
subsp. japonica GN=ACLA-1 PE=3 SV=2
Length = 407
Score = 414 bits (1064), Expect = e-115, Method: Compositional matrix adjust.
Identities = 201/241 (83%), Positives = 213/241 (88%), Gaps = 18/241 (7%)
Query: 2 GVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFK-KWANIEFPLPFGRV 60
GVFAVFQDLDFSF+EMNPFT+VNGEPYPLDMRGELDDTAAFK + KW NIEFPLPFGRV
Sbjct: 184 GVFAVFQDLDFSFLEMNPFTIVNGEPYPLDMRGELDDTAAFKTSRSKWGNIEFPLPFGRV 243
Query: 61 LSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYA 120
LSSTE FIH LDEKTSASLKFTVLNPKGRIWTMVAGG EL NYA
Sbjct: 244 LSSTEGFIHDLDEKTSASLKFTVLNPKGRIWTMVAGG-----------------ELENYA 286
Query: 121 EYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKE 180
EYSGAPNEEEVLQYARVV+DCATADPDGRKRALLIGGGIANFTDV TF+GIIRALREKE
Sbjct: 287 EYSGAPNEEEVLQYARVVLDCATADPDGRKRALLIGGGIANFTDVGATFSGIIRALREKE 346
Query: 181 SKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCIMSA 240
SKLKAARMHI+VRRGGPNYQTGLAKMR LG ELG+P+EVYGPEATMTGICKQAI+C+M+A
Sbjct: 347 SKLKAARMHIYVRRGGPNYQTGLAKMRKLGAELGVPIEVYGPEATMTGICKQAIECVMAA 406
Query: 241 S 241
+
Sbjct: 407 A 407
>sp|P53396|ACLY_HUMAN ATP-citrate synthase OS=Homo sapiens GN=ACLY PE=1 SV=3
Length = 1101
Score = 244 bits (623), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 161/235 (68%), Gaps = 4/235 (1%)
Query: 2 GVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVL 61
G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP PFGR
Sbjct: 187 GLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPPPFGREA 246
Query: 62 SSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAE 121
E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +EL NY E
Sbjct: 247 YPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGE 306
Query: 122 YSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIANFTDVATTFNGIIRALREK 179
YSGAP+E++ YA+ ++ T + PDG + L+IGG IANFT+VA TF GI+RA+R+
Sbjct: 307 YSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVRAIRDY 364
Query: 180 ESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAI 234
+ LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A+
Sbjct: 365 QGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419
>sp|Q91V92|ACLY_MOUSE ATP-citrate synthase OS=Mus musculus GN=Acly PE=1 SV=1
Length = 1091
Score = 244 bits (623), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 117/233 (50%), Positives = 158/233 (67%)
Query: 2 GVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVL 61
G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP PFGR
Sbjct: 187 GLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPPPFGREA 246
Query: 62 SSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAE 121
E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +EL NY E
Sbjct: 247 YPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGE 306
Query: 122 YSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKES 181
YSGAP+E++ YA+ ++ T + + L+IGG IANFT+VA TF GI+RA+R+ +
Sbjct: 307 YSGAPSEQQTYDYAKTILSLMTREKHPEGKILIIGGSIANFTNVAATFKGIVRAIRDYQG 366
Query: 182 KLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAI 234
LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A+
Sbjct: 367 PLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419
>sp|Q32PF2|ACLY_BOVIN ATP-citrate synthase OS=Bos taurus GN=ACLY PE=2 SV=1
Length = 1091
Score = 244 bits (623), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 161/235 (68%), Gaps = 4/235 (1%)
Query: 2 GVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVL 61
G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP PFGR
Sbjct: 187 GLFNFYEDLYFTYLEINPLVVTKDGVYVLDLAAKVDATADYICKVKWGDIEFPPPFGREA 246
Query: 62 SSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAE 121
E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +EL NY E
Sbjct: 247 YPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGE 306
Query: 122 YSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIANFTDVATTFNGIIRALREK 179
YSGAP+E++ YA+ ++ T + PDG + L+IGG IANFT+VA TF GI+RA+R+
Sbjct: 307 YSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVRAIRDY 364
Query: 180 ESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAI 234
+ LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A+
Sbjct: 365 QGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419
>sp|Q2TCH3|ACLY_SHEEP ATP-citrate synthase OS=Ovis aries GN=ACLY PE=2 SV=1
Length = 1101
Score = 244 bits (622), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 161/235 (68%), Gaps = 4/235 (1%)
Query: 2 GVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVL 61
G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP PFGR
Sbjct: 187 GLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPPPFGREA 246
Query: 62 SSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAE 121
E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +EL NY E
Sbjct: 247 YPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGE 306
Query: 122 YSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIANFTDVATTFNGIIRALREK 179
YSGAP+E++ YA+ ++ T + PDG + L+IGG IANFT+VA TF GI+RA+R+
Sbjct: 307 YSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVRAIRDY 364
Query: 180 ESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAI 234
+ LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A+
Sbjct: 365 QGPLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMAL 419
>sp|P16638|ACLY_RAT ATP-citrate synthase OS=Rattus norvegicus GN=Acly PE=1 SV=1
Length = 1100
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 120/234 (51%), Positives = 160/234 (68%), Gaps = 4/234 (1%)
Query: 2 GVFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVL 61
G+F ++DL F+++E+NP + Y LD+ ++D TA + KW +IEFP PFGR
Sbjct: 187 GLFNFYEDLYFTYLEINPLVVTKDGVYILDLAAKVDATADYICKVKWGDIEFPPPFGREA 246
Query: 62 SSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAE 121
E++I LD K+ ASLK T+LNPKGRIWTMVAGGGASV+Y+DT+ DLG +EL NY E
Sbjct: 247 YPEEAYIADLDAKSGASLKLTLLNPKGRIWTMVAGGGASVVYSDTICDLGGVNELANYGE 306
Query: 122 YSGAPNEEEVLQYARVVIDCATAD--PDGRKRALLIGGGIANFTDVATTFNGIIRALREK 179
YSGAP+E++ YA+ ++ T + PDG + L+IGG IANFT+VA TF GI+RA+R+
Sbjct: 307 YSGAPSEQQTYDYAKTILSLMTREKHPDG--KILIIGGSIANFTNVAATFKGIVRAIRDY 364
Query: 180 ESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQA 233
+ LK + IFVRRGGPNYQ GL M +G+ GIP+ V+G E MT I A
Sbjct: 365 QGSLKEHEVTIFVRRGGPNYQEGLRVMGEVGKTTGIPIHVFGTETHMTAIVGMA 418
>sp|P53585|ACLY_CAEEL Probable ATP-citrate synthase OS=Caenorhabditis elegans GN=D1005.1
PE=2 SV=1
Length = 1106
Score = 243 bits (620), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 121/245 (49%), Positives = 163/245 (66%), Gaps = 15/245 (6%)
Query: 3 VFAVFQDLDFSFIEMNPFTLVNGEPYPLDMRGELDDTAAFKNFKKWA----------NIE 52
++ ++DL F+++E+NPF L+N + + LD+ LD+TA F KW ++E
Sbjct: 189 LYKAYKDLHFTYLEINPFVLLNNQIHVLDLAARLDETANFLCADKWKSRLTPYGGPNHVE 248
Query: 53 FPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGY 112
FP PFGR L+S E +I +D KT ASLK T+LN KGR+WTMVAGGGASV++ DTV DLG
Sbjct: 249 FPAPFGRDLTSEEQYISEMDAKTGASLKLTILNRKGRVWTMVAGGGASVVFTDTVCDLGG 308
Query: 113 ASELGNYAEYSGAPNEEEVLQYARVVIDC---ATADPDGRKRALLIGGGIANFTDVATTF 169
ASEL NY EYSG P+E + +YA+ ++ T PDG + L+IGG IANFT+VA TF
Sbjct: 309 ASELANYGEYSGDPSESQTYEYAKTLLSVMTEGTPRPDG--KVLIIGGSIANFTNVAKTF 366
Query: 170 NGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGI 229
GI+RA SKLK ++ IFVRRGGPNYQ GL +++ +L +P+ V+GPE MT I
Sbjct: 367 GGIVRAFETFVSKLKEHKVTIFVRRGGPNYQEGLRRIKDAATKLELPIHVFGPETHMTAI 426
Query: 230 CKQAI 234
A+
Sbjct: 427 VGAAL 431
>sp|O13907|ACL2_SCHPO Probable ATP-citrate synthase subunit 2 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC22A12.16 PE=1
SV=1
Length = 492
Score = 212 bits (540), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/259 (42%), Positives = 154/259 (59%), Gaps = 31/259 (11%)
Query: 3 VFAVFQDLDFSFIEMNPFTLV----NGEPYPLDMRGELDDTAAFKNFKKWA--------- 49
+++V+ D F+++E+NP ++ + + LD+ +LD TA F+ KWA
Sbjct: 218 LYSVYVDCQFTYLEINPLVVIPTAKGADVFYLDLAAKLDQTAEFECGAKWAVARAPESLG 277
Query: 50 -----------------NIEFPLPFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWT 92
+ FP PFGR LS E+++ LD KT ASLK T+LN +GR+W
Sbjct: 278 IKTSGEESGAINADHGPPMVFPAPFGRELSKEEAYVQGLDAKTGASLKLTILNAEGRVWN 337
Query: 93 MVAGGGASVIYADTVGDLGYASELGNYAEYSGAPNEEEVLQYARVVIDCAT-ADPDGRKR 151
+VAGGGASV+YAD V G A EL NY EYSGAP + + +YA+ V+D T +P +
Sbjct: 338 LVAGGGASVVYADAVAVNGAADELANYGEYSGAPTDGQTYEYAKTVLDLMTRGEPRADGK 397
Query: 152 ALLIGGGIANFTDVATTFNGIIRALREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGE 211
L IGGGIANFT A TF I RAL + + KL A ++ I+VRR GPNYQ GL +R G+
Sbjct: 398 VLFIGGGIANFTSPAVTFRAIARALGDYKDKLHAHKVSIWVRRAGPNYQEGLRVIREAGK 457
Query: 212 ELGIPLEVYGPEATMTGIC 230
+ +PL+VYGPE ++GI
Sbjct: 458 KFDLPLKVYGPECHISGIV 476
>sp|O67546|SUCC_AQUAE Succinyl-CoA ligase [ADP-forming] subunit beta OS=Aquifex aeolicus
(strain VF5) GN=sucC PE=3 SV=1
Length = 385
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 91/204 (44%), Gaps = 30/204 (14%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+ ++ ++ DLD S +E+NP L G LD + ++DD A F++ K +E
Sbjct: 178 LKLYQIYSDLDASLVEINPLVLTKEGNLIALDAKLDIDDNALFRH-KDLEEME------- 229
Query: 60 VLSSTESFIHSLD-EKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 118
E+ + L+ E L + LN G I MV G G ++ D + G E N
Sbjct: 230 ----DETQLPQLEVEAKKYGLNYIKLN--GNIGCMVNGAGLAMATMDIIKLAG--GEPAN 281
Query: 119 YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 178
+ + G N E++ R+++ ADPD + + I GGI +A G+I A
Sbjct: 282 FLDVGGGANVEQIANAFRILM----ADPDVKAVFINIFGGILRVDRLA---QGLIEA--- 331
Query: 179 KESKLKAARMHIFVRRGGPNYQTG 202
SK+ R+ I R G N + G
Sbjct: 332 --SKMVELRVPIVARLEGTNVEEG 353
>sp|B4U901|SUCC_HYDS0 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hydrogenobaculum
sp. (strain Y04AAS1) GN=sucC PE=3 SV=1
Length = 382
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 3 VFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGR 59
++ + DLD S +E+NP L +G+ LD + E+DD AAF K+ ++ +I P
Sbjct: 180 LYQAYMDLDASLLEINPLVLTKDGDIVLLDAKVEIDDNAAFRHKDIEELEDITQIDPL-- 237
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
E + + +G I MV G G ++ D + G A N+
Sbjct: 238 -------------EVEAKKYGLNYIKLEGNIGCMVNGAGLAMTTMDIIKLAGGAP--ANF 282
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREK 179
+ G + E++ R++ T+D + + + I GGI +A NG+I A
Sbjct: 283 LDVGGGASVEQIANAFRIL----TSDENVKAVFINIFGGILRCDRLA---NGLIEA---- 331
Query: 180 ESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLE 218
+K+ ++ + VR G N + G R L +E G+ E
Sbjct: 332 -AKIVNIKIPVVVRLEGTNVEEG----RKLLKESGLNFE 365
>sp|A9KBQ4|SUCC_COXBN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain Dugway 5J108-111) GN=sucC PE=3 SV=1
Length = 390
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
MG++ +F + D S +E+NP + +GE LD + +DD+A ++ +
Sbjct: 183 MGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSE----------LRE 232
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
+ +T+ H E + + + G I MV G G ++ D + G + N+
Sbjct: 233 MRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSG--GDPANF 287
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREK 179
+ G+ +E V + R+++ +D + + + I GGI +A +GII A++E
Sbjct: 288 LDVGGSATKERVTEAFRIIV----SDKNVKGILVNIFGGIVRCDLIA---DGIISAVKE- 339
Query: 180 ESKLKAARMHIFVRRGGPNYQTGLAKM 206
+ + VR G N Q G K+
Sbjct: 340 ----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|A8ZRW7|SUCC_DESOH Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfococcus
oleovorans (strain DSM 6200 / Hxd3) GN=sucC PE=3 SV=1
Length = 388
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 36/206 (17%)
Query: 2 GVFAVFQDLDFSFIEMNPFTLVNGEP-YPLDMRGELDDTAAFKNFKKWA----NIEFPLP 56
G+F +F D D S +E+NP L + LD + DD+A F++ A + E PL
Sbjct: 183 GLFKLFVDYDASLVEINPLILTTDKAVMALDAKINFDDSALFRHKDILALRDTDEEDPL- 241
Query: 57 FGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 116
E ++ +N G + MV G G ++ D + G +E
Sbjct: 242 ----------------EVEASRFNLNYINMDGNVGNMVNGAGLAMATMDIIKLAG--AEP 283
Query: 117 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRAL 176
N+ + G N E V R+++ +DP + + I GGI +A+ GI++A
Sbjct: 284 ANFLDVGGGANAEMVENGFRIIL----SDPKVKCILVNIFGGILRCDVLAS---GIVQAA 336
Query: 177 REKESKLKAARMHIFVRRGGPNYQTG 202
R A + + VR G N G
Sbjct: 337 RN-----TAIHVPLVVRMEGTNVDEG 357
>sp|A9N8R8|SUCC_COXBR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain RSA 331 / Henzerling II) GN=sucC PE=3 SV=1
Length = 390
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
MG++ +F + D S +E+NP + +GE LD + +DD+A ++ +
Sbjct: 183 MGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSE----------LRE 232
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
+ +T+ H E + + + G I MV G G ++ D + G + N+
Sbjct: 233 MRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSG--GDPANF 287
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREK 179
+ G+ +E V + ++++ +D + + + I GGI +A +GII A++E
Sbjct: 288 LDVGGSATKERVTEAFKIIV----SDKNVKGILVNIFGGIVRCDLIA---DGIISAVKE- 339
Query: 180 ESKLKAARMHIFVRRGGPNYQTGLAKM 206
+ + VR G N Q G K+
Sbjct: 340 ----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|P53592|SUCC_COXBU Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=sucC PE=3 SV=2
Length = 390
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
MG++ +F + D S +E+NP + +GE LD + +DD+A ++ +
Sbjct: 183 MGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSE----------LRE 232
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
+ +T+ H E + + + G I MV G G ++ D + G + N+
Sbjct: 233 MRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSG--GDPANF 287
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREK 179
+ G+ +E V + ++++ +D + + + I GGI +A +GII A++E
Sbjct: 288 LDVGGSATKERVTEAFKIIV----SDKNVKGILVNIFGGIVRCDLIA---DGIISAVKE- 339
Query: 180 ESKLKAARMHIFVRRGGPNYQTGLAKM 206
+ + VR G N Q G K+
Sbjct: 340 ----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|B6IZ97|SUCC_COXB2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain CbuG_Q212) GN=sucC PE=3 SV=1
Length = 390
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 92/207 (44%), Gaps = 28/207 (13%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
MG++ +F + D S +E+NP + +GE LD + +DD+A ++ +
Sbjct: 183 MGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSE----------LRE 232
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
+ +T+ H E + + + G I MV G G ++ D + G + N+
Sbjct: 233 MRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSG--GDPANF 287
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREK 179
+ G+ +E V + ++++ +D + + + I GGI +A +GII A++E
Sbjct: 288 LDVGGSATKERVTEAFKIIV----SDKNVKGILVNIFGGIVRCDLIA---DGIISAVKE- 339
Query: 180 ESKLKAARMHIFVRRGGPNYQTGLAKM 206
+ + VR G N Q G K+
Sbjct: 340 ----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|B2V8I4|SUCC_SULSY Succinyl-CoA ligase [ADP-forming] subunit beta
OS=Sulfurihydrogenibium sp. (strain YO3AOP1) GN=sucC
PE=3 SV=1
Length = 389
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 97/216 (44%), Gaps = 32/216 (14%)
Query: 3 VFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVL 61
++ ++ +LD S +E+NP L +G LD + E DD F++ + ++ P +
Sbjct: 184 LYKIYIELDASMVEINPLVLTKDGNIVILDAKIEFDDNGLFRH-PEIMEMDDPTQISPLE 242
Query: 62 SSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAE 121
+ F +L + L+ G I MV G G ++ DT+ G E N+ +
Sbjct: 243 VEAKKF----------NLNYIKLD--GNIACMVNGAGLAMSTMDTIKLAG--GEPANFLD 288
Query: 122 YSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKES 181
G+ N ++ ++++ +DP+ + + I GGI +A GII A +E
Sbjct: 289 VGGSANATQIANAFKIIL----SDPNVKAIFINIFGGILRCDRLA---EGIITAAKE--- 338
Query: 182 KLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPL 217
+ + + VR G N + G + + +E G+PL
Sbjct: 339 --VSINVPVIVRMEGTNVELG----KKMLQESGLPL 368
>sp|Q49X32|SUCC_STAS1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Staphylococcus
saprophyticus subsp. saprophyticus (strain ATCC 15305 /
DSM 20229) GN=sucC PE=3 SV=1
Length = 388
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 105/243 (43%), Gaps = 39/243 (16%)
Query: 1 MGVFAVFQDLDFSFIEMNPF-TLVNGEPYPLDMRGELDDTAAF--KNFKKWANIEFPLPF 57
+ ++ VF + D S +E+NP T GE LD + DD A F K+ ++ ++E P
Sbjct: 182 VSLYNVFIEKDCSIVEINPLVTTGEGEVLALDAKVNFDDNALFKHKDIQELRDLEEEDP- 240
Query: 58 GRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELG 117
E + L + L+ G I MV G G ++ DT+ G
Sbjct: 241 ------------KEIEASKYDLSYIALD--GDIGCMVNGAGLAMATMDTINHFG--GNPA 284
Query: 118 NYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALR 177
N+ + G +E+V + ++++ D + + + I GGI +A GI+ A++
Sbjct: 285 NFLDVGGGATKEKVTEAFKIIL----GDENVKGIFVNIFGGIMKCDIIA---EGIVAAVK 337
Query: 178 EKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEATMTGICKQAIDCI 237
E E L + VR G N + G + + +E G+ +E P ATM ++ + +
Sbjct: 338 EVELTLP-----LVVRLEGTNVERG----KEILKESGLAIE---PAATMAEGAQKIVKLV 385
Query: 238 MSA 240
A
Sbjct: 386 KEA 388
>sp|Q57663|SUCC_METJA Succinyl-CoA ligase [ADP-forming] subunit beta
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=sucC PE=3
SV=1
Length = 364
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 94/229 (41%), Gaps = 53/229 (23%)
Query: 3 VFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKN----FKKWANIEFPLPF 57
++ +F++LD + +E+NP + +G Y D LDD AAF++ F+++ N E LPF
Sbjct: 174 LYKIFKELDATMVEINPLVITKDGNVYAADAVLHLDDDAAFRHNYEEFEEYKNKE-KLPF 232
Query: 58 GRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELG 117
V LD G + + G G ++ D + +LG
Sbjct: 233 AYV---------ELD---------------GDVAVIGNGAGLTLASMDIINNLGRKP--A 266
Query: 118 NYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIRA 175
+ + G + E V R V++ + + I GGI +VA GI+
Sbjct: 267 CFLDIGGGADAETVKLALRKVLENKNV------KGIFINILGGITRCDEVAK---GIVEV 317
Query: 176 LREKESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPLEVYGPEA 224
L+E + A RM G N + G R + EE GIP E EA
Sbjct: 318 LKEHPNVKFAVRMM------GTNEEIG----RKILEEHGIPYETSMEEA 356
>sp|B6J8N7|SUCC_COXB1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Coxiella burnetii
(strain CbuK_Q154) GN=sucC PE=3 SV=1
Length = 390
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 91/207 (43%), Gaps = 28/207 (13%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
MG++ +F + D S +E+NP + +GE LD + +DD+A ++ +
Sbjct: 183 MGLYRLFTERDLSLLEINPLVITGSGELICLDAKINIDDSALYRQSE----------LRE 232
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
+ +T+ H E + + + G I MV G G ++ D + G + N+
Sbjct: 233 MRDTTQEDEH---ETMAQQWELNYIKLDGNIGCMVNGAGLAMATMDLIKLSG--GDPANF 287
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREK 179
+ G+ +E V + +++ +D + + + I GGI +A +GII A++E
Sbjct: 288 LDVGGSATKERVTEAFKII----ASDKNVKGILVNIFGGIVRCDLIA---DGIISAVKE- 339
Query: 180 ESKLKAARMHIFVRRGGPNYQTGLAKM 206
+ + VR G N Q G K+
Sbjct: 340 ----VGIDVPVVVRLEGNNAQLGAKKL 362
>sp|Q2W063|SUCC_MAGSA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Magnetospirillum
magneticum (strain AMB-1 / ATCC 700264) GN=sucC PE=3
SV=1
Length = 398
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 3 VFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGRVL 61
++ F DLD S +E+NP + GE LD + DD A F++ +IE +
Sbjct: 193 LYKAFMDLDCSIVEINPLVVTGAGELIALDAKVNFDDNALFRH----KDIE------ELR 242
Query: 62 SSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNYAE 121
+E L E SL + L+ G+I MV G G ++ D + Y +E N+ +
Sbjct: 243 DESEEDPAEL-EAARHSLNYIKLD--GQIGCMVNGAGLAMATMDIIKL--YGAEPANFLD 297
Query: 122 YSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREKES 181
G +E V ++++ +DP+ + I GGI +A G++ A RE
Sbjct: 298 VGGGATKERVTTAFKLIL----SDPNVEGILVNIFGGIMRCDVIA---EGVVAAARE--- 347
Query: 182 KLKAARMHIFVRRGGPNYQTG 202
+ + + VR G N + G
Sbjct: 348 --VSLNVPLVVRLEGTNVELG 366
>sp|Q5X7K6|SUCC_LEGPA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Paris) GN=sucC PE=3 SV=1
Length = 387
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 38/208 (18%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
MG+ +F D D S +E+NP + +G+ LD + +D A F+ K
Sbjct: 182 MGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQPK------------- 228
Query: 60 VLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 116
L + D + AS L + L+ G I MV G G ++ D + + E
Sbjct: 229 -LKNMRDVSQEDDRENRASDWELNYIPLD--GTIGCMVNGAGLAMATMDVIK--LHGGEP 283
Query: 117 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIR 174
N+ + G +E V + ++++ D + + +L+ GGI +A +GI+
Sbjct: 284 ANFLDVGGGATKERVSEALKIIV------SDEKVKGILVNIFGGIVRCDLIA---DGILA 334
Query: 175 ALREKESKLKAARMHIFVRRGGPNYQTG 202
A++E + K+ + VR G N Q G
Sbjct: 335 AVKEVDVKIP-----VVVRLEGNNAQLG 357
>sp|Q5WZ04|SUCC_LEGPL Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Lens) GN=sucC PE=3 SV=1
Length = 387
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 38/208 (18%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
MG+ +F D D S +E+NP + +G+ LD + +D A F+ K
Sbjct: 182 MGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQPK------------- 228
Query: 60 VLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 116
L + D + AS L + L+ G I MV G G ++ D + + E
Sbjct: 229 -LKNMRDVSQEDDRENRASDWELNYIPLD--GTIGCMVNGAGLAMATMDVIK--LHGGEP 283
Query: 117 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIR 174
N+ + G +E V + ++++ D + + +L+ GGI +A +GI+
Sbjct: 284 ANFLDVGGGATKERVSEALKIIV------SDEKVKGILVNIFGGIVRCDLIA---DGILA 334
Query: 175 ALREKESKLKAARMHIFVRRGGPNYQTG 202
A++E + K+ + VR G N Q G
Sbjct: 335 AVKEVDVKIP-----VVVRLEGNNAQLG 357
>sp|A5IH21|SUCC_LEGPC Succinyl-CoA ligase [ADP-forming] subunit beta OS=Legionella
pneumophila (strain Corby) GN=sucC PE=3 SV=1
Length = 387
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 89/208 (42%), Gaps = 38/208 (18%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
MG+ +F D D S +E+NP + +G+ LD + +D A F+ K
Sbjct: 182 MGLGKMFVDCDLSLLEINPLVITKSGQLICLDGKINIDGNALFRQPK------------- 228
Query: 60 VLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 116
L + D + AS L + L+ G I MV G G ++ D + + E
Sbjct: 229 -LKNMRDVSQEDDRENRASDWELNYIPLD--GTIGCMVNGAGLAMATMDVIK--LHGGEP 283
Query: 117 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIR 174
N+ + G +E V + ++++ D + + +L+ GGI +A +GI+
Sbjct: 284 ANFLDVGGGATKERVSEALKIIV------SDEKVKGILVNIFGGIVRCDLIA---DGILA 334
Query: 175 ALREKESKLKAARMHIFVRRGGPNYQTG 202
A++E + K+ + VR G N Q G
Sbjct: 335 AVKEVDVKIP-----VVVRLEGNNAQLG 357
>sp|A4IZC2|SUCC_FRATW Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. tularensis (strain WY96-3418) GN=sucC
PE=3 SV=1
Length = 387
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 27/181 (14%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTL-VNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+G + F + DF+ E+NP + NGE +D + LD A +++ K A + +
Sbjct: 183 LGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAK 242
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
L ++E H L+ + L KG I MV G G ++ D + Y + N+
Sbjct: 243 ELKASE---HELN--------YVAL--KGNIGCMVNGAGLAMATMDIIQL--YGGKPANF 287
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALR 177
+ G +E V++ ++++D D +A+LI GGI +A II A++
Sbjct: 288 LDVGGGATKERVIEAFKLILD------DENVKAVLINIFGGIVRCDMIAEA---IIEAVK 338
Query: 178 E 178
E
Sbjct: 339 E 339
>sp|A0LIY8|SUCC_SYNFM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Syntrophobacter
fumaroxidans (strain DSM 10017 / MPOB) GN=sucC PE=3 SV=1
Length = 388
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 31/203 (15%)
Query: 3 VFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAF--KNFKKWANIEFPLPFGR 59
++ + D D S +E+NP L + LD + DD A + K+ +++ +++ PF
Sbjct: 184 LYKLCTDYDCSLVEINPLVLTSDNRVIALDGKINFDDNAMYRHKDIQEYRDLDEEDPFEI 243
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
E + L + + P G I MV G G ++ D + G A N+
Sbjct: 244 -------------EASKFELNYIKM-PGGNIGNMVNGAGLAMATMDIIQQAGAAP--ANF 287
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREK 179
+ G + E+V R+++ ADP + + I GGI +A NG++ A
Sbjct: 288 LDVGGGASAEQVENGFRIIL----ADPAVKGVLINIFGGILRCDRLA---NGVVEA---- 336
Query: 180 ESKLKAARMHIFVRRGGPNYQTG 202
+K R+ + +R G N + G
Sbjct: 337 -AKKVGIRVPVVIRMEGTNVEQG 358
>sp|B8FLW6|SUCC_DESAA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Desulfatibacillum
alkenivorans (strain AK-01) GN=sucC PE=3 SV=1
Length = 386
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/204 (22%), Positives = 87/204 (42%), Gaps = 32/204 (15%)
Query: 2 GVFAVFQDLDFSFIEMNPFTLVNGE-PYPLDMRGELDDTAAF--KNFKKWANIEFPLPFG 58
G++ +F D D S +E+NP L + LD + DD+A + K+ +++ +++ P
Sbjct: 183 GLYKMFMDTDCSLLEINPLVLTGDDGIIALDAKINFDDSALYRHKDIQEYRDLDEEEPL- 241
Query: 59 RVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGN 118
E ++ + G + MV G G ++ D + G +E N
Sbjct: 242 --------------EVEASKFNLNYIKMDGNVGNMVNGAGLAMATMDIIKQAG--AEPAN 285
Query: 119 YAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALRE 178
+ + G N E+V R+++ +D + + + I GGI +A+ G++ A
Sbjct: 286 FLDVGGGANAEQVENGFRIIL----SDKNVKGILINIFGGILRCDVLAS---GVVEA--- 335
Query: 179 KESKLKAARMHIFVRRGGPNYQTG 202
+K + + VR G N + G
Sbjct: 336 --AKKVGLNVPVVVRMEGTNVEEG 357
>sp|A1RTB8|SUCC_PYRIL Succinyl-CoA ligase [ADP-forming] subunit beta OS=Pyrobaculum
islandicum (strain DSM 4184 / JCM 9189) GN=sucC PE=3
SV=1
Length = 382
Score = 45.1 bits (105), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 31/218 (14%)
Query: 2 GVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFG-R 59
++ + D D +E NP L GE PLD R +DD A FK+ ++E L R
Sbjct: 177 AMYRIMVDYDAELVETNPLALSKEGEVIPLDARVIVDDNALFKH----PDLEKALEEDPR 232
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
++ E++ + + F + G I + G G ++ D V G N+
Sbjct: 233 DITEFEAY--------AKKIGFHYVELDGDIGIIGNGAGLTMATMDLVYHFG--GRPANF 282
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALREK 179
+ G + E V + +V+++ P + + I GGI +VA GI AL E
Sbjct: 283 LDIGGGASREVVKEAVKVLLN----HPRVKVIFVNIFGGITRADEVAL---GIKDALAE- 334
Query: 180 ESKLKAARMHIFVRRGGPNYQTGLAKMRALGEELGIPL 217
+K I VR G N + G +A+ E+GIPL
Sbjct: 335 ---VKEHTKKIVVRIKGTNEEQG----KAILSEIGIPL 365
>sp|Q87A98|SUCC_XYLFT Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xylella
fastidiosa (strain Temecula1 / ATCC 700964) GN=sucC PE=3
SV=1
Length = 387
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+ ++ +F D D S IE+NP ++ NG+ Y LD + DD A F++ +
Sbjct: 182 ISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRH--------------K 227
Query: 60 VLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 116
L++ + + AS L + ++ G I MV G G ++ D + G E
Sbjct: 228 ELAAMRDKTQEDETEVLASENDLNYVTMD--GNIGCMVNGAGLAMATMDVIKLNG--GEP 283
Query: 117 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIR 174
N+ + G +E V ++++ + +A+ + GGI +A GII
Sbjct: 284 ANFLDVGGGATKERVTTAFKLILSS------NKVKAIFVNIFGGIVRCDMIA---EGIIA 334
Query: 175 ALREKESKLKAARMHIFVRRGGPNYQTG 202
A++E ++ + VR G N G
Sbjct: 335 AVKE-----VGVKVPVIVRLEGTNVDAG 357
>sp|B2I9R4|SUCC_XYLF2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xylella
fastidiosa (strain M23) GN=sucC PE=3 SV=1
Length = 387
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+ ++ +F D D S IE+NP ++ NG+ Y LD + DD A F++ +
Sbjct: 182 ISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRH--------------K 227
Query: 60 VLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 116
L++ + + AS L + ++ G I MV G G ++ D + G E
Sbjct: 228 ELAAMRDKTQEDETEVLASENDLNYVTMD--GNIGCMVNGAGLAMATMDVIKLNG--GEP 283
Query: 117 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIR 174
N+ + G +E V ++++ + +A+ + GGI +A GII
Sbjct: 284 ANFLDVGGGATKERVTTAFKLILSS------NKVKAIFVNIFGGIVRCDMIA---EGIIA 334
Query: 175 ALREKESKLKAARMHIFVRRGGPNYQTG 202
A++E ++ + VR G N G
Sbjct: 335 AVKE-----VGVKVPVIVRLEGTNVDAG 357
>sp|Q9PAH1|SUCC_XYLFA Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xylella
fastidiosa (strain 9a5c) GN=sucC PE=3 SV=1
Length = 387
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+ ++ +F D D S IE+NP ++ NG+ Y LD + DD A F++ +
Sbjct: 182 ISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRH--------------K 227
Query: 60 VLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 116
L++ + + AS L + ++ G I MV G G ++ D + G E
Sbjct: 228 ELAAMRDKTQEDETEVLASENDLNYVTMD--GNIGCMVNGAGLAMATMDVIKLNG--GEP 283
Query: 117 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIR 174
N+ + G +E V ++++ + +A+ + GGI +A GII
Sbjct: 284 ANFLDVGGGATKERVTTAFKLILSS------NKVKAIFVNIFGGIVRCDMIA---EGIIA 334
Query: 175 ALREKESKLKAARMHIFVRRGGPNYQTG 202
A++E ++ + VR G N G
Sbjct: 335 AVKE-----VGVKVPVIVRLEGTNVDAG 357
>sp|B0U5F8|SUCC_XYLFM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xylella
fastidiosa (strain M12) GN=sucC PE=3 SV=1
Length = 387
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 38/208 (18%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+ ++ +F D D S IE+NP ++ NG+ Y LD + DD A F++ +
Sbjct: 182 ISLYQLFNDKDLSLIELNPLAILSNGDLYALDGKINSDDNATFRH--------------K 227
Query: 60 VLSSTESFIHSLDEKTSAS---LKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASEL 116
L++ + + AS L + ++ G I MV G G ++ D + G E
Sbjct: 228 ELAAMRDKTQEDETEVLASENDLNYVTMD--GNIGCMVNGAGLAMATMDVIKLNG--GEP 283
Query: 117 GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIR 174
N+ + G +E V ++++ + +A+ + GGI +A GII
Sbjct: 284 ANFLDVGGGATKERVTTAFKLILSS------NKVKAIFVNIFGGIVRCDMIA---EGIIA 334
Query: 175 ALREKESKLKAARMHIFVRRGGPNYQTG 202
A++E ++ + VR G N G
Sbjct: 335 AVKE-----VGVKVPVIVRLEGTNVDAG 357
>sp|Q2SD35|SUCC_HAHCH Succinyl-CoA ligase [ADP-forming] subunit beta OS=Hahella
chejuensis (strain KCTC 2396) GN=sucC PE=3 SV=1
Length = 388
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 89/209 (42%), Gaps = 32/209 (15%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+G+ +FQDLD + +E+NP + G + LD + +D A ++ P R
Sbjct: 182 LGLAKLFQDLDLALLEVNPLVITKGGNLHCLDAKVVVDGNALYRQ---------P----R 228
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
+ + E +A + + +G I MV G G ++ D V G A N+
Sbjct: 229 IRDMHDPSQEDPREAHAAKWELNYVALEGNIGCMVNGAGLAMGTMDIVKLHGGAP--ANF 286
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALR 177
+ G +E V + ++++ D +A+L+ GGI +A +GII A+
Sbjct: 287 LDVGGGATKERVTEAFKIIL------SDDNVKAVLVNIFGGIVRCDLIA---DGIIGAVE 337
Query: 178 EKESKLKAARMHIFVRRGGPNYQTGLAKM 206
E ++ + VR G N + G K+
Sbjct: 338 E-----VGVKIPVVVRLEGNNAELGAKKL 361
>sp|Q5NHF3|SUCC_FRATT Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. tularensis (strain SCHU S4 / Schu 4)
GN=sucC PE=3 SV=1
Length = 387
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 27/181 (14%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTL-VNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+G + F + DF+ E+NP + NGE +D + LD A +++ K A + +
Sbjct: 183 LGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAK 242
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
L ++E H L+ + L +G I MV G G ++ D + Y + N+
Sbjct: 243 ELKASE---HELN--------YVAL--EGNIGCMVNGAGLAMATMDIIQL--YGGKPANF 287
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALR 177
+ G +E V++ ++++D D +A+LI GGI +A II A++
Sbjct: 288 LDVGGGATKERVIEAFKLILD------DENVKAILINIFGGIVRCDMIAEA---IIEAVK 338
Query: 178 E 178
E
Sbjct: 339 E 339
>sp|Q14IV5|SUCC_FRAT1 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. tularensis (strain FSC 198) GN=sucC
PE=3 SV=1
Length = 387
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 27/181 (14%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTL-VNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+G + F + DF+ E+NP + NGE +D + LD A +++ K A + +
Sbjct: 183 LGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAK 242
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
L ++E H L+ + L +G I MV G G ++ D + Y + N+
Sbjct: 243 ELKASE---HELN--------YVAL--EGNIGCMVNGAGLAMATMDIIQL--YGGKPANF 287
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALR 177
+ G +E V++ ++++D D +A+LI GGI +A II A++
Sbjct: 288 LDVGGGATKERVIEAFKLILD------DENVKAILINIFGGIVRCDMIAEA---IIEAVK 338
Query: 178 E 178
E
Sbjct: 339 E 339
>sp|Q8P676|SUCC_XANCP Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
campestris pv. campestris (strain ATCC 33913 / NCPPB 528
/ LMG 568) GN=sucC PE=3 SV=1
Length = 389
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+ ++ +F D D + +E+NP ++ +G Y LD + + DD AAF+
Sbjct: 182 VNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQ-------------KA 228
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
+++ + E T++ L + G I MV G G ++ D + G E N+
Sbjct: 229 LVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNG--GEPANF 286
Query: 120 AEYSGAPNEEEVLQYARVVI 139
+ G N++ V++ ++++
Sbjct: 287 LDVGGGANKQRVIEAFKLIL 306
>sp|Q4UXU0|SUCC_XANC8 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
campestris pv. campestris (strain 8004) GN=sucC PE=3
SV=1
Length = 389
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+ ++ +F D D + +E+NP ++ +G Y LD + + DD AAF+
Sbjct: 182 VNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQ-------------KA 228
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
+++ + E T++ L + G I MV G G ++ D + G E N+
Sbjct: 229 LVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNG--GEPANF 286
Query: 120 AEYSGAPNEEEVLQYARVVI 139
+ G N++ V++ ++++
Sbjct: 287 LDVGGGANKQRVIEAFKLIL 306
>sp|A4IM83|SUCC_GEOTN Succinyl-CoA ligase [ADP-forming] subunit beta OS=Geobacillus
thermodenitrificans (strain NG80-2) GN=sucC PE=3 SV=1
Length = 386
Score = 44.7 bits (104), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 90/205 (43%), Gaps = 32/205 (15%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFK--NFKKWANIEFPLPF 57
MG++ VF D D S E+NP + +G+ LD + D A ++ + ++ +++ P
Sbjct: 182 MGLYQVFVDKDCSIAEINPLVVTGDGKVMALDAKLNFDSNALYRHPDIMEYRDLDEEDP- 240
Query: 58 GRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELG 117
E + L + L+ G I MV G G ++ D + Y E
Sbjct: 241 ------------KEVEASKYDLNYIALD--GNIGCMVNGAGLAMATMDIIKY--YGGEPA 284
Query: 118 NYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIRALR 177
N+ + G +EE+V + ++++ +DP+ + + I GGI +A+ GI+ A
Sbjct: 285 NFLDVGGGASEEKVTEAFKIIL----SDPNVKGIFVNIFGGIMKCDVIAS---GIVAA-- 335
Query: 178 EKESKLKAARMHIFVRRGGPNYQTG 202
+K + + VR G N + G
Sbjct: 336 ---TKQVGLTLPLVVRLEGTNVELG 357
>sp|C1F2F2|SUCC_ACIC5 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Acidobacterium
capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670)
GN=sucC PE=3 SV=1
Length = 391
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 93/208 (44%), Gaps = 38/208 (18%)
Query: 1 MGVFAVFQDLDFSFIEMNPF-TLVNGEPYPLDMRGELDDTAAF--KNFKKWANI--EFPL 55
MG++ + D D S +E+NPF T + + + LD + DD A F K+ K+ +I E PL
Sbjct: 185 MGLYKAYMDTDASLLEINPFITTKDDKLFALDCKINFDDNAMFRHKDLKELRDIAEEDPL 244
Query: 56 PFGRVLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASE 115
E + +L + L+ G I MV G G ++ D + YA
Sbjct: 245 EV---------------EASKYALNYIKLD--GNIACMVNGAGLAMATMDII---QYAGG 284
Query: 116 L-GNYAEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIGGGIANFTDVATTFNGIIR 174
+ N+ + G N++++ +++ +D + + + I GGI V T +G++
Sbjct: 285 MPANFLDVGGGANQQQIEHAFEILL----SDKNVQAVFINIFGGILR---VDTLAHGVVG 337
Query: 175 ALREKESKLKAARMHIFVRRGGPNYQTG 202
A ++ K+ I +R G N + G
Sbjct: 338 AAQKLNVKVP-----IVLRLEGTNVEEG 360
>sp|B0RPQ9|SUCC_XANCB Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
campestris pv. campestris (strain B100) GN=sucC PE=3
SV=1
Length = 389
Score = 44.7 bits (104), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLV-NGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+ ++ +F D D + +E+NP ++ +G Y LD + + DD AAF+
Sbjct: 182 VNLYRLFNDKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQ-------------KA 228
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
+++ + E T++ L + G I MV G G ++ D + G E N+
Sbjct: 229 LVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNG--GEPANF 286
Query: 120 AEYSGAPNEEEVLQYARVVI 139
+ G N++ V++ ++++
Sbjct: 287 LDVGGGANKQRVIEAFKLIL 306
>sp|B0TZ23|SUCC_FRAP2 Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
philomiragia subsp. philomiragia (strain ATCC 25017)
GN=sucC PE=3 SV=1
Length = 387
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 80/181 (44%), Gaps = 27/181 (14%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTL-VNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+G + F + DF+ E+NP + NGE +D + LD A +++ K A + +
Sbjct: 183 LGAYKAFVECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAK 242
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
L ++E L + L +G I MV G G ++ D + Y + N+
Sbjct: 243 ELKASEH-----------ELNYVAL--EGNIGCMVNGAGLAMATMDIIQL--YGGKPANF 287
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALR 177
+ G +E V++ ++++D D +A+LI GGI +A II A++
Sbjct: 288 LDVGGGATKERVIEAFKLILD------DENVKAVLINIFGGIVRCDMIAEA---IIEAVK 338
Query: 178 E 178
E
Sbjct: 339 E 339
>sp|Q5H2H4|SUCC_XANOR Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
oryzae pv. oryzae (strain KACC10331 / KXO85) GN=sucC
PE=3 SV=1
Length = 389
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+ ++ +F + D + +E+NP +++ G Y LD + + DD AAF+ +
Sbjct: 182 VNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQ-------------KQ 228
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
+++ + E T++ L + G I MV G G ++ D + G E N+
Sbjct: 229 LVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNG--GEPANF 286
Query: 120 AEYSGAPNEEEVLQYARVVI 139
+ G N++ V++ ++++
Sbjct: 287 LDVGGGANKQRVIEAFKLIL 306
>sp|B2ST87|SUCC_XANOP Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
oryzae pv. oryzae (strain PXO99A) GN=sucC PE=3 SV=1
Length = 389
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+ ++ +F + D + +E+NP +++ G Y LD + + DD AAF+ +
Sbjct: 182 VNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQ-------------KQ 228
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
+++ + E T++ L + G I MV G G ++ D + G E N+
Sbjct: 229 LVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNG--GEPANF 286
Query: 120 AEYSGAPNEEEVLQYARVVI 139
+ G N++ V++ ++++
Sbjct: 287 LDVGGGANKQRVIEAFKLIL 306
>sp|Q2P5E6|SUCC_XANOM Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
oryzae pv. oryzae (strain MAFF 311018) GN=sucC PE=3 SV=1
Length = 389
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+ ++ +F + D + +E+NP +++ G Y LD + + DD AAF+ +
Sbjct: 182 VNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQ-------------KQ 228
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
+++ + E T++ L + G I MV G G ++ D + G E N+
Sbjct: 229 LVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNG--GEPANF 286
Query: 120 AEYSGAPNEEEVLQYARVVI 139
+ G N++ V++ ++++
Sbjct: 287 LDVGGGANKQRVIEAFKLIL 306
>sp|Q8PHL5|SUCC_XANAC Succinyl-CoA ligase [ADP-forming] subunit beta OS=Xanthomonas
axonopodis pv. citri (strain 306) GN=sucC PE=3 SV=1
Length = 389
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 65/140 (46%), Gaps = 16/140 (11%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTLVN-GEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+ ++ +F + D + +E+NP +++ G Y LD + + DD AAF+ +
Sbjct: 182 VNLYKLFNEKDLALVEINPLAILDDGNLYALDGKFDSDDNAAFRQ-------------KQ 228
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
+++ + E T++ L + G I MV G G ++ D + G E N+
Sbjct: 229 LVAMRDKTQEDETEVTASELDINYVTMDGNIGCMVNGAGLAMATMDVIKLNG--GEPANF 286
Query: 120 AEYSGAPNEEEVLQYARVVI 139
+ G N++ V++ ++++
Sbjct: 287 LDVGGGANKQRVIEAFKLIL 306
>sp|Q2A253|SUCC_FRATH Succinyl-CoA ligase [ADP-forming] subunit beta OS=Francisella
tularensis subsp. holarctica (strain LVS) GN=sucC PE=3
SV=1
Length = 387
Score = 44.3 bits (103), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 82/181 (45%), Gaps = 27/181 (14%)
Query: 1 MGVFAVFQDLDFSFIEMNPFTL-VNGEPYPLDMRGELDDTAAFKNFKKWANIEFPLPFGR 59
+G + F + DF+ E+NP + NGE +D + LD A +++ K A + +
Sbjct: 183 LGAYKAFIECDFALFEINPLAVRENGEIVCVDGKINLDSNALYRHPKLLALRDKSQENAK 242
Query: 60 VLSSTESFIHSLDEKTSASLKFTVLNPKGRIWTMVAGGGASVIYADTVGDLGYASELGNY 119
L ++E H L+ + L +G I MV G G ++ D + Y + N+
Sbjct: 243 ELKASE---HELN--------YVAL--EGNIGCMVNGAGLAMATMDIIQL--YGGKPANF 287
Query: 120 AEYSGAPNEEEVLQYARVVIDCATADPDGRKRALLIG--GGIANFTDVATTFNGIIRALR 177
+ G +E V++ ++++D D +A+LI GGI +A II A++
Sbjct: 288 LDVGGGATKERVIEAFKLILD------DENVKAVLINIFGGIVRCDMIAEA---IIEAVK 338
Query: 178 E 178
E
Sbjct: 339 E 339
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,152,221
Number of Sequences: 539616
Number of extensions: 3973030
Number of successful extensions: 9854
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 9823
Number of HSP's gapped (non-prelim): 238
length of query: 241
length of database: 191,569,459
effective HSP length: 114
effective length of query: 127
effective length of database: 130,053,235
effective search space: 16516760845
effective search space used: 16516760845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)