Query 026239
Match_columns 241
No_of_seqs 494 out of 1718
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 08:51:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026239.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026239hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3to5_A CHEY homolog; alpha(5)b 100.0 2.7E-29 9.3E-34 191.2 14.4 122 12-151 9-131 (134)
2 3gl9_A Response regulator; bet 99.9 2.3E-24 7.7E-29 160.2 16.6 118 16-151 3-120 (122)
3 2lpm_A Two-component response 99.9 7.5E-27 2.6E-31 175.0 1.0 114 12-150 5-119 (123)
4 3t6k_A Response regulator rece 99.9 4.6E-24 1.6E-28 161.4 15.2 121 15-153 4-124 (136)
5 3h1g_A Chemotaxis protein CHEY 99.9 4.7E-23 1.6E-27 154.2 15.6 121 14-151 4-125 (129)
6 3rqi_A Response regulator prot 99.9 2E-23 7E-28 166.1 13.5 121 14-154 6-126 (184)
7 3f6p_A Transcriptional regulat 99.9 5E-23 1.7E-27 152.3 14.7 115 16-151 3-117 (120)
8 3gt7_A Sensor protein; structu 99.9 1.3E-22 4.4E-27 156.7 17.2 123 13-153 5-127 (154)
9 3hv2_A Response regulator/HD d 99.9 1.4E-22 4.7E-27 156.1 16.8 123 12-154 11-134 (153)
10 2r25_B Osmosensing histidine p 99.9 8.9E-23 3.1E-27 153.7 15.5 123 15-151 2-125 (133)
11 3m6m_D Sensory/regulatory prot 99.9 1.2E-22 4E-27 155.1 15.4 120 14-151 13-134 (143)
12 3crn_A Response regulator rece 99.9 3E-22 1E-26 150.4 16.8 119 15-153 3-121 (132)
13 3kht_A Response regulator; PSI 99.9 3.1E-22 1.1E-26 152.2 16.2 124 14-155 4-130 (144)
14 1i3c_A Response regulator RCP1 99.9 5.8E-22 2E-26 152.0 17.5 130 14-154 7-138 (149)
15 3kto_A Response regulator rece 99.9 9E-23 3.1E-27 154.1 12.7 121 14-154 5-127 (136)
16 1jbe_A Chemotaxis protein CHEY 99.9 5.4E-22 1.8E-26 147.6 16.8 121 14-152 3-124 (128)
17 2pl1_A Transcriptional regulat 99.9 5.4E-22 1.8E-26 146.1 16.6 117 16-152 1-117 (121)
18 3snk_A Response regulator CHEY 99.9 1.1E-23 3.8E-28 158.7 7.6 121 12-152 11-132 (135)
19 1dbw_A Transcriptional regulat 99.9 4.2E-22 1.4E-26 148.2 15.9 117 15-151 3-119 (126)
20 3hdg_A Uncharacterized protein 99.9 4.2E-22 1.4E-26 150.1 15.6 123 13-155 5-127 (137)
21 3grc_A Sensor protein, kinase; 99.9 1E-22 3.5E-27 154.0 12.2 124 13-154 4-128 (140)
22 1p6q_A CHEY2; chemotaxis, sign 99.9 3E-22 1E-26 149.2 14.6 120 14-151 5-125 (129)
23 3r0j_A Possible two component 99.9 4.6E-22 1.6E-26 165.7 16.1 121 13-153 21-141 (250)
24 3heb_A Response regulator rece 99.9 8.2E-22 2.8E-26 151.4 15.8 129 15-152 4-134 (152)
25 1mb3_A Cell division response 99.9 6.5E-22 2.2E-26 146.3 14.5 118 16-151 2-119 (124)
26 1srr_A SPO0F, sporulation resp 99.9 1.1E-21 3.7E-26 145.3 15.7 116 16-151 4-119 (124)
27 3jte_A Response regulator rece 99.9 1.4E-21 4.9E-26 148.2 16.7 122 15-154 3-124 (143)
28 3lua_A Response regulator rece 99.9 1.4E-22 4.6E-27 153.5 10.9 124 14-154 3-128 (140)
29 3eod_A Protein HNR; response r 99.9 5.4E-22 1.9E-26 148.2 13.9 120 14-153 6-126 (130)
30 3i42_A Response regulator rece 99.9 3E-22 1E-26 149.0 12.4 119 15-152 3-121 (127)
31 3cfy_A Putative LUXO repressor 99.9 1.2E-21 4E-26 148.3 15.7 118 16-153 5-122 (137)
32 1k68_A Phytochrome response re 99.9 1.8E-21 6.3E-26 146.3 16.7 129 15-154 2-132 (140)
33 3luf_A Two-component system re 99.9 5.7E-22 1.9E-26 166.6 15.2 122 14-152 123-244 (259)
34 1tmy_A CHEY protein, TMY; chem 99.9 7.8E-22 2.7E-26 145.1 14.1 115 16-150 3-118 (120)
35 3nhm_A Response regulator; pro 99.9 7.3E-22 2.5E-26 147.9 14.2 120 15-154 4-123 (133)
36 1xhf_A DYE resistance, aerobic 99.9 2.1E-21 7.2E-26 143.4 16.5 117 15-152 3-119 (123)
37 4e7p_A Response regulator; DNA 99.9 1.1E-21 3.9E-26 150.4 15.4 121 12-152 17-139 (150)
38 1k66_A Phytochrome response re 99.9 1.2E-21 4E-26 149.1 15.4 133 12-154 3-139 (149)
39 1zgz_A Torcad operon transcrip 99.9 2.7E-21 9.3E-26 142.6 16.7 116 16-152 3-118 (122)
40 2qzj_A Two-component response 99.9 1E-21 3.5E-26 148.5 14.6 118 15-153 4-121 (136)
41 3lte_A Response regulator; str 99.9 1.6E-21 5.5E-26 145.8 15.3 122 13-153 4-125 (132)
42 3hdv_A Response regulator; PSI 99.9 1.2E-21 4.1E-26 147.4 14.5 124 13-154 5-128 (136)
43 3b2n_A Uncharacterized protein 99.9 1.1E-21 3.8E-26 147.4 14.0 119 15-153 3-123 (133)
44 3cnb_A DNA-binding response re 99.9 2E-21 6.8E-26 147.0 15.5 123 13-153 6-130 (143)
45 2a9o_A Response regulator; ess 99.9 1.9E-21 6.6E-26 142.7 14.9 115 16-151 2-116 (120)
46 2zay_A Response regulator rece 99.9 1.3E-21 4.5E-26 149.1 14.2 124 13-154 6-129 (147)
47 3kcn_A Adenylate cyclase homol 99.9 5.6E-21 1.9E-25 146.6 17.6 121 15-155 4-125 (151)
48 3ilh_A Two component response 99.9 3.7E-21 1.3E-25 146.0 16.3 127 13-152 7-138 (146)
49 3h5i_A Response regulator/sens 99.9 8E-22 2.7E-26 149.5 12.5 121 14-154 4-125 (140)
50 3c3m_A Response regulator rece 99.9 2E-21 6.9E-26 146.9 14.6 119 15-151 3-121 (138)
51 3mm4_A Histidine kinase homolo 99.9 1.3E-21 4.6E-26 158.7 14.3 133 14-153 60-196 (206)
52 3f6c_A Positive transcription 99.9 5.8E-22 2E-26 148.6 11.3 118 15-152 1-119 (134)
53 1qkk_A DCTD, C4-dicarboxylate 99.9 7.2E-21 2.5E-25 146.5 17.5 121 15-155 3-123 (155)
54 3n0r_A Response regulator; sig 99.9 2.7E-22 9.2E-27 171.1 9.8 117 14-153 159-277 (286)
55 3eq2_A Probable two-component 99.9 2.6E-21 8.9E-26 171.5 16.3 121 13-153 3-124 (394)
56 1yio_A Response regulatory pro 99.9 2.7E-21 9.1E-26 156.2 14.8 120 15-154 4-123 (208)
57 1zh2_A KDP operon transcriptio 99.9 4.4E-21 1.5E-25 141.0 14.6 116 16-152 2-117 (121)
58 3hzh_A Chemotaxis response reg 99.9 2.8E-21 9.4E-26 149.6 14.0 118 15-150 36-154 (157)
59 2qxy_A Response regulator; reg 99.9 4.3E-21 1.5E-25 145.4 14.5 120 14-154 3-122 (142)
60 1dz3_A Stage 0 sporulation pro 99.9 3.7E-21 1.3E-25 143.7 13.9 118 16-152 3-122 (130)
61 3q9s_A DNA-binding response re 99.9 2.4E-21 8.2E-26 161.7 14.2 118 14-152 36-153 (249)
62 3cu5_A Two component transcrip 99.9 3.7E-21 1.3E-25 146.2 13.9 118 16-153 3-123 (141)
63 2jba_A Phosphate regulon trans 99.9 7.6E-22 2.6E-26 146.5 9.9 118 16-151 3-120 (127)
64 1mvo_A PHOP response regulator 99.9 4.4E-21 1.5E-25 144.1 14.2 117 16-152 4-120 (136)
65 2ayx_A Sensor kinase protein R 99.9 2.9E-21 9.9E-26 161.7 14.2 120 14-153 128-247 (254)
66 2rjn_A Response regulator rece 99.9 1.4E-20 4.7E-25 144.8 16.9 121 14-154 6-127 (154)
67 3cg4_A Response regulator rece 99.9 1.8E-21 6.1E-26 147.4 11.6 124 12-153 4-127 (142)
68 4dad_A Putative pilus assembly 99.9 1.4E-21 4.7E-26 149.0 10.9 121 13-152 18-140 (146)
69 3dzd_A Transcriptional regulat 99.9 1.4E-21 4.9E-26 172.2 12.6 116 17-152 2-117 (368)
70 1dcf_A ETR1 protein; beta-alph 99.9 5.9E-21 2E-25 143.7 14.3 119 14-151 6-127 (136)
71 1s8n_A Putative antiterminator 99.9 5.3E-21 1.8E-25 154.3 14.7 119 15-154 13-132 (205)
72 3n53_A Response regulator rece 99.9 1.4E-21 4.7E-26 147.9 10.6 121 15-154 3-123 (140)
73 1a04_A Nitrate/nitrite respons 99.9 1E-20 3.6E-25 153.5 15.9 120 14-153 4-125 (215)
74 3eul_A Possible nitrate/nitrit 99.9 1.3E-20 4.3E-25 144.7 15.2 122 12-153 12-135 (152)
75 3cg0_A Response regulator rece 99.9 1.3E-20 4.3E-25 142.2 14.9 122 12-154 6-129 (140)
76 2jk1_A HUPR, hydrogenase trans 99.9 3.2E-20 1.1E-24 140.3 17.1 118 16-154 2-120 (139)
77 3cz5_A Two-component response 99.9 1E-20 3.5E-25 145.4 14.3 120 13-152 3-124 (153)
78 3a10_A Response regulator; pho 99.9 4.6E-21 1.6E-25 140.2 11.6 113 16-150 2-114 (116)
79 1kgs_A DRRD, DNA binding respo 99.9 9.2E-21 3.2E-25 154.6 14.0 118 16-153 3-120 (225)
80 1w25_A Stalked-cell differenti 99.8 2.3E-20 7.9E-25 168.3 17.6 121 16-154 2-122 (459)
81 2qr3_A Two-component system re 99.8 1.7E-20 5.7E-25 141.5 13.8 118 15-152 3-125 (140)
82 2qvg_A Two component response 99.8 1.8E-20 6.2E-25 141.9 13.2 124 14-149 6-131 (143)
83 1ny5_A Transcriptional regulat 99.8 3.6E-20 1.2E-24 164.2 16.2 119 16-154 1-119 (387)
84 1ys7_A Transcriptional regulat 99.8 1.2E-20 4.1E-25 154.8 12.0 120 14-153 6-125 (233)
85 3bre_A Probable two-component 99.8 4.6E-20 1.6E-24 160.9 16.0 120 14-151 17-137 (358)
86 2gkg_A Response regulator homo 99.8 3.9E-20 1.3E-24 136.7 12.4 117 16-151 6-123 (127)
87 3eqz_A Response regulator; str 99.8 1.9E-20 6.6E-25 140.1 10.7 117 15-152 3-124 (135)
88 2qv0_A Protein MRKE; structura 99.8 8.8E-20 3E-24 138.3 14.4 121 12-154 6-128 (143)
89 3kyj_B CHEY6 protein, putative 99.8 5.2E-20 1.8E-24 140.1 12.8 114 12-145 10-127 (145)
90 3c3w_A Two component transcrip 99.8 1.5E-20 5E-25 154.3 10.2 119 15-153 1-121 (225)
91 2qsj_A DNA-binding response re 99.8 4.4E-20 1.5E-24 141.8 12.2 118 15-152 3-123 (154)
92 2oqr_A Sensory transduction pr 99.8 7.6E-20 2.6E-24 149.8 13.8 117 16-153 5-121 (230)
93 2rdm_A Response regulator rece 99.8 1.3E-19 4.4E-24 135.2 13.4 119 14-153 4-123 (132)
94 1p2f_A Response regulator; DRR 99.8 1.7E-19 5.8E-24 146.9 14.5 115 16-153 3-117 (220)
95 2j48_A Two-component sensor ki 99.8 1.9E-19 6.7E-24 130.9 13.2 113 16-149 2-114 (119)
96 2gwr_A DNA-binding response re 99.8 1.4E-19 4.6E-24 149.5 13.0 116 16-152 6-121 (238)
97 3t8y_A CHEB, chemotaxis respon 99.8 3.1E-19 1.1E-23 139.1 14.2 112 11-143 21-136 (164)
98 3klo_A Transcriptional regulat 99.8 1.5E-20 5.1E-25 154.0 6.6 121 13-153 5-129 (225)
99 2pln_A HP1043, response regula 99.8 4.3E-19 1.5E-23 133.6 13.8 117 12-153 15-133 (137)
100 1dc7_A NTRC, nitrogen regulati 99.8 3.5E-21 1.2E-25 141.9 1.7 118 15-152 3-120 (124)
101 1qo0_D AMIR; binding protein, 99.8 2.5E-19 8.4E-24 143.5 12.5 117 13-154 10-126 (196)
102 3c97_A Signal transduction his 99.8 2.2E-19 7.4E-24 135.9 10.8 118 15-153 10-130 (140)
103 3sy8_A ROCR; TIM barrel phosph 99.8 1.8E-19 6.2E-24 160.2 11.5 119 15-152 3-127 (400)
104 2b4a_A BH3024; flavodoxin-like 99.8 6.9E-19 2.4E-23 132.6 9.9 116 12-151 12-129 (138)
105 2hqr_A Putative transcriptiona 99.8 3.3E-18 1.1E-22 139.5 13.7 114 16-153 1-115 (223)
106 1a2o_A CHEB methylesterase; ba 99.7 2.1E-17 7.2E-22 144.5 14.6 105 15-140 3-111 (349)
107 3luf_A Two-component system re 99.7 8E-18 2.7E-22 141.2 9.0 104 15-141 4-108 (259)
108 2vyc_A Biodegradative arginine 99.7 2E-17 7E-22 157.8 9.6 119 16-153 1-133 (755)
109 1w25_A Stalked-cell differenti 99.3 1.1E-10 3.8E-15 104.8 16.7 117 15-151 152-268 (459)
110 3cwo_X Beta/alpha-barrel prote 99.2 7E-12 2.4E-16 102.3 5.6 87 39-145 5-93 (237)
111 3q7r_A Transcriptional regulat 97.9 6.8E-05 2.3E-09 52.4 8.1 107 14-152 11-117 (121)
112 3n75_A LDC, lysine decarboxyla 97.8 1.7E-05 5.6E-10 75.1 6.0 93 29-143 20-112 (715)
113 2ayx_A Sensor kinase protein R 97.6 0.0002 6.8E-09 59.0 7.9 95 13-150 9-103 (254)
114 2yxb_A Coenzyme B12-dependent 97.5 0.0019 6.5E-08 49.6 12.6 120 14-153 17-145 (161)
115 3cwo_X Beta/alpha-barrel prote 96.8 0.0016 5.4E-08 52.1 5.8 64 79-145 146-218 (237)
116 1wv2_A Thiazole moeity, thiazo 95.9 0.07 2.4E-06 43.9 10.2 87 25-135 122-215 (265)
117 1ccw_A Protein (glutamate muta 95.7 0.14 4.7E-06 37.9 10.6 104 22-144 14-127 (137)
118 3q58_A N-acetylmannosamine-6-p 95.4 0.12 4.1E-06 41.8 9.9 86 28-136 118-210 (229)
119 3ezx_A MMCP 1, monomethylamine 95.4 0.12 4E-06 41.5 9.8 103 14-137 91-204 (215)
120 1y80_A Predicted cobalamin bin 95.4 0.12 4E-06 41.0 9.8 103 14-137 87-198 (210)
121 2i2x_B MTAC, methyltransferase 94.8 0.46 1.6E-05 39.0 12.0 101 14-137 122-231 (258)
122 1r8j_A KAIA; circadian clock p 94.8 0.46 1.6E-05 39.0 11.6 85 12-116 6-90 (289)
123 3igs_A N-acetylmannosamine-6-p 94.8 0.22 7.4E-06 40.3 9.8 85 28-135 118-209 (232)
124 1xrs_B D-lysine 5,6-aminomutas 94.1 0.83 2.9E-05 37.6 12.0 110 14-144 119-249 (262)
125 2htm_A Thiazole biosynthesis p 94.1 0.11 3.9E-06 42.7 6.6 80 34-135 119-206 (268)
126 2xij_A Methylmalonyl-COA mutas 93.4 0.88 3E-05 43.1 12.1 120 14-153 603-731 (762)
127 3kp1_A D-ornithine aminomutase 93.4 0.85 2.9E-05 42.3 11.5 112 12-144 599-726 (763)
128 3qja_A IGPS, indole-3-glycerol 92.9 1.1 3.6E-05 37.2 10.8 88 28-135 151-241 (272)
129 1req_A Methylmalonyl-COA mutas 92.5 1.2 4.1E-05 42.0 11.6 112 14-145 595-715 (727)
130 1yad_A Regulatory protein TENI 92.4 1.4 4.7E-05 34.9 10.5 81 29-134 102-190 (221)
131 2ekc_A AQ_1548, tryptophan syn 91.9 0.45 1.5E-05 39.1 7.2 56 92-149 81-142 (262)
132 3o63_A Probable thiamine-phosp 91.5 2.4 8.4E-05 34.3 11.1 71 44-135 141-218 (243)
133 1geq_A Tryptophan synthase alp 91.5 0.4 1.4E-05 38.7 6.4 51 93-146 69-125 (248)
134 3ffs_A Inosine-5-monophosphate 91.1 2.7 9.3E-05 36.7 11.7 101 15-134 156-273 (400)
135 1qop_A Tryptophan synthase alp 89.4 0.56 1.9E-05 38.6 5.6 57 92-150 81-143 (268)
136 3lab_A Putative KDPG (2-keto-3 89.3 3.9 0.00013 32.6 10.3 49 91-143 50-98 (217)
137 1xi3_A Thiamine phosphate pyro 88.7 2.9 9.8E-05 32.5 9.2 53 78-134 129-188 (215)
138 3vnd_A TSA, tryptophan synthas 88.6 0.33 1.1E-05 40.1 3.6 56 93-150 83-144 (267)
139 2gjl_A Hypothetical protein PA 88.4 4.3 0.00015 34.1 10.7 54 78-134 139-199 (328)
140 1ujp_A Tryptophan synthase alp 88.3 1 3.4E-05 37.3 6.4 55 93-150 80-140 (271)
141 3bul_A Methionine synthase; tr 88.0 4.1 0.00014 37.4 10.8 102 15-138 98-213 (579)
142 4fo4_A Inosine 5'-monophosphat 87.9 5.7 0.00019 34.2 11.1 102 13-134 118-238 (366)
143 3tsm_A IGPS, indole-3-glycerol 87.5 4.9 0.00017 33.1 10.1 93 30-142 160-260 (272)
144 1geq_A Tryptophan synthase alp 87.4 4 0.00014 32.7 9.4 42 92-136 179-220 (248)
145 3bo9_A Putative nitroalkan dio 87.3 4.9 0.00017 33.9 10.3 79 34-134 119-203 (326)
146 2w6r_A Imidazole glycerol phos 86.9 2 6.8E-05 34.8 7.4 54 80-136 47-103 (266)
147 3usb_A Inosine-5'-monophosphat 86.7 7.7 0.00026 34.9 11.8 104 13-135 266-387 (511)
148 3nav_A Tryptophan synthase alp 86.7 0.71 2.4E-05 38.2 4.5 58 91-150 83-146 (271)
149 1qop_A Tryptophan synthase alp 86.3 3.7 0.00013 33.6 8.8 42 93-137 194-235 (268)
150 1ka9_F Imidazole glycerol phos 86.3 3 0.0001 33.4 8.1 53 80-135 48-103 (252)
151 1xm3_A Thiazole biosynthesis p 86.1 1.2 4E-05 36.7 5.6 43 91-136 165-207 (264)
152 3fkq_A NTRC-like two-domain pr 85.9 2.5 8.6E-05 36.3 7.9 48 14-61 20-70 (373)
153 2w6r_A Imidazole glycerol phos 85.7 4.4 0.00015 32.7 9.0 41 92-135 188-228 (266)
154 2tps_A Protein (thiamin phosph 85.5 10 0.00035 29.6 10.8 41 91-134 158-198 (227)
155 2z6i_A Trans-2-enoyl-ACP reduc 85.4 3.9 0.00013 34.5 8.7 53 78-133 131-188 (332)
156 3khj_A Inosine-5-monophosphate 85.1 5.4 0.00019 34.2 9.5 102 14-134 116-234 (361)
157 2gek_A Phosphatidylinositol ma 84.9 12 0.0004 31.4 11.6 66 78-152 283-348 (406)
158 3bw2_A 2-nitropropane dioxygen 84.6 8 0.00028 33.1 10.5 41 91-134 195-235 (369)
159 3f4w_A Putative hexulose 6 pho 84.4 8.7 0.0003 29.7 9.9 55 78-135 128-186 (211)
160 2v5j_A 2,4-dihydroxyhept-2-ENE 84.1 17 0.00057 30.1 12.2 71 77-148 60-131 (287)
161 1eep_A Inosine 5'-monophosphat 84.1 11 0.00037 32.7 11.2 44 92-135 241-284 (404)
162 1rd5_A Tryptophan synthase alp 83.8 3.1 0.0001 33.8 7.1 42 92-136 189-230 (262)
163 4avf_A Inosine-5'-monophosphat 83.7 18 0.0006 32.4 12.6 102 15-135 241-360 (490)
164 2v82_A 2-dehydro-3-deoxy-6-pho 83.1 2.5 8.4E-05 33.1 6.1 78 34-135 96-175 (212)
165 1y0e_A Putative N-acetylmannos 83.0 7.1 0.00024 30.5 8.8 42 92-136 163-204 (223)
166 2c6q_A GMP reductase 2; TIM ba 82.8 14 0.00046 31.6 11.0 104 15-138 132-255 (351)
167 3r2g_A Inosine 5'-monophosphat 82.7 18 0.00062 31.0 11.8 96 15-134 112-226 (361)
168 3l9w_A Glutathione-regulated p 82.6 6.2 0.00021 34.5 9.0 53 78-135 69-121 (413)
169 1ujp_A Tryptophan synthase alp 82.1 3.8 0.00013 33.8 7.0 40 93-137 191-230 (271)
170 3qz6_A HPCH/HPAI aldolase; str 82.0 9.8 0.00034 31.0 9.5 73 77-150 37-110 (261)
171 3rht_A (gatase1)-like protein; 80.8 0.48 1.6E-05 39.0 1.1 33 15-47 4-38 (259)
172 2bfw_A GLGA glycogen synthase; 80.8 15 0.00053 27.4 11.6 106 15-152 70-179 (200)
173 3ovp_A Ribulose-phosphate 3-ep 80.2 9.9 0.00034 30.3 8.8 56 77-135 134-196 (228)
174 1ka9_F Imidazole glycerol phos 80.1 5.1 0.00017 32.0 7.1 63 80-145 169-240 (252)
175 2lci_A Protein OR36; structura 80.1 5.8 0.0002 27.1 6.1 38 19-56 81-118 (134)
176 3ceu_A Thiamine phosphate pyro 80.1 4.3 0.00015 31.8 6.5 55 77-133 107-169 (210)
177 2vws_A YFAU, 2-keto-3-deoxy su 80.1 23 0.00077 28.8 12.2 72 77-149 39-111 (267)
178 3tdn_A FLR symmetric alpha-bet 80.0 6.5 0.00022 31.4 7.7 54 80-136 52-108 (247)
179 3fwz_A Inner membrane protein 79.8 14 0.00049 26.4 10.8 53 77-135 71-124 (140)
180 2xci_A KDO-transferase, 3-deox 79.5 7.8 0.00027 33.0 8.5 110 15-152 225-345 (374)
181 1jcn_A Inosine monophosphate d 79.4 15 0.00051 32.9 10.6 39 92-133 346-384 (514)
182 4dzz_A Plasmid partitioning pr 78.3 11 0.00037 28.5 8.3 80 12-116 27-108 (206)
183 3nav_A Tryptophan synthase alp 77.8 14 0.00048 30.4 9.1 100 16-137 126-238 (271)
184 3rc1_A Sugar 3-ketoreductase; 77.6 7.2 0.00025 33.0 7.6 107 11-150 23-136 (350)
185 1h1y_A D-ribulose-5-phosphate 77.5 7.5 0.00026 30.8 7.3 56 77-135 138-200 (228)
186 4fxs_A Inosine-5'-monophosphat 77.3 18 0.00062 32.3 10.4 103 14-135 242-362 (496)
187 2y88_A Phosphoribosyl isomeras 77.2 12 0.0004 29.6 8.4 63 80-145 166-240 (244)
188 3llv_A Exopolyphosphatase-rela 77.0 3.3 0.00011 29.8 4.6 113 15-134 6-121 (141)
189 3vnd_A TSA, tryptophan synthas 76.3 16 0.00054 29.9 9.0 42 93-137 195-236 (267)
190 4gud_A Imidazole glycerol phos 76.3 9.9 0.00034 29.4 7.6 35 17-51 4-38 (211)
191 1rd5_A Tryptophan synthase alp 76.3 2.3 7.9E-05 34.6 3.9 53 92-148 82-137 (262)
192 1qb3_A Cyclin-dependent kinase 75.6 0.52 1.8E-05 34.9 -0.2 7 77-83 40-46 (150)
193 1dxe_A 2-dehydro-3-deoxy-galac 75.4 30 0.001 27.8 12.0 72 77-149 40-112 (256)
194 1qpo_A Quinolinate acid phosph 75.3 13 0.00045 30.7 8.3 94 18-134 168-267 (284)
195 3s83_A Ggdef family protein; s 75.2 6.4 0.00022 31.6 6.3 96 33-147 146-252 (259)
196 3o07_A Pyridoxine biosynthesis 74.9 2.5 8.5E-05 35.1 3.7 51 92-145 186-243 (291)
197 3l4e_A Uncharacterized peptida 74.8 16 0.00053 28.6 8.3 63 15-101 27-99 (206)
198 1thf_D HISF protein; thermophI 74.7 12 0.0004 29.8 7.8 53 80-135 168-223 (253)
199 2q5c_A NTRC family transcripti 74.7 27 0.00093 26.9 12.1 43 16-58 5-48 (196)
200 4gmf_A Yersiniabactin biosynth 74.5 10 0.00036 32.6 7.8 33 119-151 84-116 (372)
201 4had_A Probable oxidoreductase 74.4 8.2 0.00028 32.4 7.1 107 12-150 20-133 (350)
202 2yw3_A 4-hydroxy-2-oxoglutarat 74.3 29 0.00098 27.0 10.9 65 44-133 110-176 (207)
203 3vk5_A MOEO5; TIM barrel, tran 74.0 6.8 0.00023 32.5 6.1 58 78-137 200-257 (286)
204 2d00_A V-type ATP synthase sub 73.9 20 0.00068 25.0 8.9 79 15-116 3-81 (109)
205 2oo3_A Protein involved in cat 73.9 8.5 0.00029 31.9 6.7 70 15-100 113-183 (283)
206 1wa3_A 2-keto-3-deoxy-6-phosph 73.9 5.7 0.00019 30.7 5.5 42 91-135 136-177 (205)
207 1vzw_A Phosphoribosyl isomeras 73.8 9.4 0.00032 30.3 7.0 63 80-145 163-237 (244)
208 3ajx_A 3-hexulose-6-phosphate 73.8 1.8 6.1E-05 33.7 2.5 56 91-148 39-97 (207)
209 1thf_D HISF protein; thermophI 73.7 11 0.00036 30.1 7.3 41 92-135 62-102 (253)
210 4a29_A Engineered retro-aldol 73.7 32 0.0011 28.0 10.0 88 29-136 143-233 (258)
211 3m2t_A Probable dehydrogenase; 73.6 16 0.00054 30.9 8.7 107 14-151 4-116 (359)
212 1h5y_A HISF; histidine biosynt 73.6 20 0.00069 28.1 8.9 53 80-135 50-105 (253)
213 1yxy_A Putative N-acetylmannos 73.4 14 0.00048 29.1 7.9 40 92-135 175-214 (234)
214 2l69_A Rossmann 2X3 fold prote 72.8 20 0.00067 24.5 10.5 41 17-57 4-44 (134)
215 2iw1_A Lipopolysaccharide core 72.8 33 0.0011 28.2 10.5 64 79-152 272-336 (374)
216 1gox_A (S)-2-hydroxy-acid oxid 72.8 28 0.00095 29.8 10.1 87 29-135 215-308 (370)
217 3kts_A Glycerol uptake operon 72.7 4.9 0.00017 31.4 4.7 45 87-135 134-178 (192)
218 1x1o_A Nicotinate-nucleotide p 72.3 30 0.001 28.6 9.8 92 17-134 168-266 (286)
219 2p10_A MLL9387 protein; putati 71.9 17 0.00057 30.1 7.9 81 36-137 160-260 (286)
220 3dr5_A Putative O-methyltransf 71.7 11 0.00038 29.5 6.8 67 15-101 81-151 (221)
221 3gjy_A Spermidine synthase; AP 71.6 15 0.00052 30.8 8.0 70 15-102 113-189 (317)
222 1p0k_A Isopentenyl-diphosphate 71.4 39 0.0013 28.4 10.7 45 89-135 235-279 (349)
223 1h5y_A HISF; histidine biosynt 71.2 10 0.00035 29.9 6.6 41 92-135 186-226 (253)
224 3sgz_A Hydroxyacid oxidase 2; 71.1 21 0.00072 30.5 8.8 88 28-135 206-300 (352)
225 4adt_A Pyridoxine biosynthetic 70.8 14 0.00047 30.8 7.4 41 92-135 195-237 (297)
226 1vcf_A Isopentenyl-diphosphate 70.7 37 0.0013 28.3 10.3 47 90-138 241-288 (332)
227 3e18_A Oxidoreductase; dehydro 70.5 17 0.00057 30.8 8.1 104 14-150 4-112 (359)
228 1qv9_A F420-dependent methylen 70.3 4.3 0.00015 32.8 3.9 58 76-137 63-120 (283)
229 3sho_A Transcriptional regulat 70.3 31 0.0011 25.7 10.3 82 17-120 41-127 (187)
230 4e5v_A Putative THUA-like prot 70.0 6.7 0.00023 32.4 5.3 81 14-115 3-94 (281)
231 3fro_A GLGA glycogen synthase; 69.7 49 0.0017 27.7 11.2 108 14-152 284-394 (439)
232 1rzu_A Glycogen synthase 1; gl 69.5 46 0.0016 28.7 11.1 107 15-151 320-438 (485)
233 2nzl_A Hydroxyacid oxidase 1; 69.5 18 0.00061 31.4 8.1 92 27-138 240-339 (392)
234 2hmt_A YUAA protein; RCK, KTN, 69.4 12 0.00041 26.3 6.1 113 16-134 7-122 (144)
235 3gnn_A Nicotinate-nucleotide p 69.3 33 0.0011 28.6 9.3 65 43-133 214-278 (298)
236 1qo2_A Molecule: N-((5-phospho 69.2 15 0.00052 29.0 7.2 62 80-145 161-238 (241)
237 3q2i_A Dehydrogenase; rossmann 68.9 26 0.00089 29.4 9.0 107 12-150 10-122 (354)
238 2ekc_A AQ_1548, tryptophan syn 68.9 29 0.00098 28.1 8.9 40 94-137 196-235 (262)
239 3huu_A Transcription regulator 68.3 28 0.00094 28.1 8.8 20 28-47 46-65 (305)
240 3tfw_A Putative O-methyltransf 68.3 42 0.0014 26.4 10.6 69 15-102 88-159 (248)
241 2nli_A Lactate oxidase; flavoe 68.0 26 0.00087 30.0 8.8 92 27-138 217-316 (368)
242 4e38_A Keto-hydroxyglutarate-a 68.0 28 0.00096 27.8 8.4 92 32-144 28-120 (232)
243 1z0s_A Probable inorganic poly 67.7 8.5 0.00029 31.8 5.4 93 15-151 29-121 (278)
244 3o9z_A Lipopolysaccaride biosy 67.6 14 0.00046 30.7 6.8 44 107-150 72-119 (312)
245 1zh8_A Oxidoreductase; TM0312, 67.4 34 0.0012 28.5 9.4 44 107-150 82-129 (340)
246 2xhz_A KDSD, YRBH, arabinose 5 67.1 26 0.00089 26.1 7.9 82 17-120 51-136 (183)
247 3tha_A Tryptophan synthase alp 66.6 9.3 0.00032 31.1 5.4 54 94-149 77-136 (252)
248 2p9j_A Hypothetical protein AQ 66.4 11 0.00037 27.5 5.4 40 93-136 42-81 (162)
249 1ypf_A GMP reductase; GUAC, pu 66.2 58 0.002 27.3 11.7 95 16-133 121-236 (336)
250 2lnd_A De novo designed protei 66.1 26 0.00088 23.2 6.7 55 94-152 42-100 (112)
251 4e38_A Keto-hydroxyglutarate-a 65.7 33 0.0011 27.4 8.4 74 36-134 124-200 (232)
252 3euw_A MYO-inositol dehydrogen 65.3 29 0.00098 28.9 8.5 103 15-149 4-111 (344)
253 1tqx_A D-ribulose-5-phosphate 65.3 13 0.00044 29.7 5.9 56 78-136 139-201 (227)
254 1izc_A Macrophomate synthase i 65.2 62 0.0021 27.3 10.8 73 77-149 63-138 (339)
255 1ep3_A Dihydroorotate dehydrog 65.2 39 0.0013 27.6 9.2 38 93-133 230-267 (311)
256 3mz0_A Inositol 2-dehydrogenas 65.1 46 0.0016 27.6 9.8 32 118-149 79-112 (344)
257 3qk7_A Transcriptional regulat 64.9 16 0.00056 29.3 6.7 16 30-45 31-46 (294)
258 3cea_A MYO-inositol 2-dehydrog 64.9 40 0.0014 27.9 9.4 42 13-54 6-49 (346)
259 1p9l_A Dihydrodipicolinate red 64.9 53 0.0018 26.3 9.9 80 16-120 1-82 (245)
260 2otd_A Glycerophosphodiester p 64.8 39 0.0013 26.7 8.9 51 78-136 185-235 (247)
261 3pfn_A NAD kinase; structural 64.7 35 0.0012 29.3 8.9 120 14-153 37-164 (365)
262 3c85_A Putative glutathione-re 64.6 19 0.00066 26.8 6.7 113 15-134 39-157 (183)
263 3okp_A GDP-mannose-dependent a 64.3 24 0.00082 29.2 7.9 64 79-152 274-343 (394)
264 3c48_A Predicted glycosyltrans 64.2 65 0.0022 27.1 11.5 64 79-152 327-390 (438)
265 3qvq_A Phosphodiesterase OLEI0 64.2 41 0.0014 26.8 8.9 51 78-136 188-238 (252)
266 1jvn_A Glutamine, bifunctional 64.1 21 0.00073 32.4 7.8 63 80-145 469-541 (555)
267 2fpo_A Methylase YHHF; structu 64.0 24 0.00081 26.9 7.2 67 16-101 78-146 (202)
268 1tqj_A Ribulose-phosphate 3-ep 63.9 9 0.00031 30.5 4.8 56 91-150 49-108 (230)
269 2qfm_A Spermine synthase; sper 63.7 57 0.0019 27.9 10.0 68 16-99 212-296 (364)
270 2qzs_A Glycogen synthase; glyc 63.5 51 0.0018 28.4 10.1 63 79-151 368-439 (485)
271 3tha_A Tryptophan synthase alp 63.5 24 0.00084 28.6 7.3 97 18-137 120-228 (252)
272 2ift_A Putative methylase HI07 63.4 24 0.00084 26.8 7.2 68 16-101 77-149 (201)
273 3sr7_A Isopentenyl-diphosphate 63.3 49 0.0017 28.3 9.6 42 92-135 265-306 (365)
274 1vrd_A Inosine-5'-monophosphat 63.1 56 0.0019 28.9 10.4 44 91-134 324-367 (494)
275 1qap_A Quinolinic acid phospho 63.1 64 0.0022 26.7 10.2 90 18-133 182-277 (296)
276 2yzr_A Pyridoxal biosynthesis 62.9 6.9 0.00023 33.2 4.0 42 91-135 227-270 (330)
277 2f6u_A GGGPS, (S)-3-O-geranylg 62.9 14 0.00049 29.6 5.8 55 79-137 165-219 (234)
278 2iuy_A Avigt4, glycosyltransfe 62.9 21 0.00072 29.2 7.2 54 89-152 252-307 (342)
279 3paj_A Nicotinate-nucleotide p 62.7 56 0.0019 27.4 9.6 90 18-133 205-300 (320)
280 1es9_A PAF-AH, platelet-activa 62.6 25 0.00085 27.1 7.2 86 14-116 37-139 (232)
281 3e9m_A Oxidoreductase, GFO/IDH 62.5 18 0.00062 30.1 6.7 104 14-149 4-113 (330)
282 2vpt_A Lipolytic enzyme; ester 62.4 18 0.0006 27.7 6.2 89 13-117 3-130 (215)
283 3k4h_A Putative transcriptiona 62.3 30 0.001 27.5 7.8 19 28-46 32-50 (292)
284 2agk_A 1-(5-phosphoribosyl)-5- 62.2 19 0.00066 29.2 6.6 66 80-145 174-254 (260)
285 3jy6_A Transcriptional regulat 62.2 49 0.0017 26.0 9.1 15 31-45 29-43 (276)
286 3ec7_A Putative dehydrogenase; 62.2 33 0.0011 28.8 8.4 106 14-150 22-134 (357)
287 3f4w_A Putative hexulose 6 pho 62.1 4.5 0.00016 31.4 2.7 45 91-137 39-85 (211)
288 3ic5_A Putative saccharopine d 62.1 32 0.0011 23.0 7.1 40 15-55 5-45 (118)
289 3vkj_A Isopentenyl-diphosphate 62.0 67 0.0023 27.4 10.3 40 94-135 256-295 (368)
290 2f6u_A GGGPS, (S)-3-O-geranylg 61.8 15 0.00053 29.4 5.8 53 78-141 34-89 (234)
291 3oa2_A WBPB; oxidoreductase, s 61.6 22 0.00074 29.6 7.0 44 107-150 73-120 (318)
292 4h08_A Putative hydrolase; GDS 61.5 48 0.0016 24.7 9.5 86 14-116 19-120 (200)
293 1qdl_B Protein (anthranilate s 61.5 6.8 0.00023 30.1 3.6 31 18-48 4-34 (195)
294 1vc4_A Indole-3-glycerol phosp 61.5 5.2 0.00018 32.5 3.0 28 107-135 208-235 (254)
295 1wa3_A 2-keto-3-deoxy-6-phosph 61.4 35 0.0012 26.0 7.8 60 78-142 36-95 (205)
296 2bdq_A Copper homeostasis prot 61.3 22 0.00074 28.4 6.4 94 22-135 100-206 (224)
297 3hcw_A Maltose operon transcri 61.1 31 0.0011 27.6 7.8 20 28-47 31-50 (295)
298 3tqv_A Nicotinate-nucleotide p 61.0 29 0.001 28.7 7.5 67 79-149 170-238 (287)
299 3iwp_A Copper homeostasis prot 60.9 24 0.00082 29.2 6.9 77 39-136 39-131 (287)
300 3b0p_A TRNA-dihydrouridine syn 60.7 40 0.0014 28.5 8.6 38 93-133 185-222 (350)
301 3ezy_A Dehydrogenase; structur 60.5 43 0.0015 27.8 8.7 43 108-150 65-111 (344)
302 3gv0_A Transcriptional regulat 60.5 37 0.0013 27.0 8.1 18 29-46 30-47 (288)
303 3inp_A D-ribulose-phosphate 3- 60.2 16 0.00055 29.5 5.7 58 91-150 72-130 (246)
304 2l69_A Rossmann 2X3 fold prote 60.1 29 0.001 23.6 6.0 41 15-55 77-117 (134)
305 3u81_A Catechol O-methyltransf 60.1 55 0.0019 25.0 8.8 60 15-88 83-145 (221)
306 2i7c_A Spermidine synthase; tr 60.1 42 0.0014 27.2 8.4 68 16-102 103-181 (283)
307 2jjm_A Glycosyl transferase, g 60.1 30 0.001 29.0 7.7 65 78-152 285-349 (394)
308 1sui_A Caffeoyl-COA O-methyltr 59.4 63 0.0022 25.5 10.8 73 15-102 104-179 (247)
309 4ef8_A Dihydroorotate dehydrog 59.4 16 0.00056 31.1 5.9 40 93-134 265-304 (354)
310 2r60_A Glycosyl transferase, g 59.4 41 0.0014 29.3 8.7 99 28-152 321-423 (499)
311 3hm2_A Precorrin-6Y C5,15-meth 59.1 26 0.00088 25.5 6.4 66 15-102 49-116 (178)
312 3orh_A Guanidinoacetate N-meth 59.0 38 0.0013 26.5 7.7 55 15-87 83-138 (236)
313 3tb6_A Arabinose metabolism tr 58.9 42 0.0014 26.6 8.2 20 27-46 33-52 (298)
314 1g5t_A COB(I)alamin adenosyltr 58.8 25 0.00086 27.3 6.4 47 75-124 118-169 (196)
315 3db2_A Putative NADPH-dependen 58.7 46 0.0016 27.8 8.6 105 14-150 4-113 (354)
316 3p9n_A Possible methyltransfer 58.6 53 0.0018 24.3 10.5 69 15-101 67-139 (189)
317 2uva_G Fatty acid synthase bet 58.6 25 0.00085 37.3 8.0 40 93-135 744-794 (2060)
318 3aon_B V-type sodium ATPase su 58.5 29 0.00097 24.5 6.1 75 16-115 3-77 (115)
319 1f0k_A MURG, UDP-N-acetylgluco 58.5 50 0.0017 27.0 8.8 62 78-150 255-322 (364)
320 2fli_A Ribulose-phosphate 3-ep 58.3 7.8 0.00027 30.2 3.5 57 78-135 132-197 (220)
321 3vzx_A Heptaprenylglyceryl pho 58.3 21 0.00073 28.5 6.0 55 78-137 154-209 (228)
322 2ho3_A Oxidoreductase, GFO/IDH 58.3 76 0.0026 26.0 10.3 42 108-149 63-108 (325)
323 3c3y_A Pfomt, O-methyltransfer 58.3 43 0.0015 26.2 8.0 72 15-101 95-169 (237)
324 1twd_A Copper homeostasis prot 58.2 43 0.0015 27.2 7.8 91 22-134 97-196 (256)
325 3qja_A IGPS, indole-3-glycerol 58.2 31 0.0011 28.2 7.2 54 93-149 102-157 (272)
326 4fxs_A Inosine-5'-monophosphat 58.1 24 0.00081 31.6 6.9 56 77-135 243-299 (496)
327 2hsj_A Putative platelet activ 58.1 8.5 0.00029 29.3 3.6 88 12-116 31-133 (214)
328 2ixa_A Alpha-N-acetylgalactosa 58.1 61 0.0021 28.1 9.6 115 13-150 18-138 (444)
329 3snr_A Extracellular ligand-bi 57.7 35 0.0012 27.8 7.7 85 16-122 136-231 (362)
330 3td9_A Branched chain amino ac 57.7 66 0.0023 26.4 9.5 86 15-122 149-245 (366)
331 3iwp_A Copper homeostasis prot 57.5 27 0.00093 28.9 6.6 91 23-133 136-235 (287)
332 1vgv_A UDP-N-acetylglucosamine 57.4 46 0.0016 27.5 8.4 41 107-152 301-341 (384)
333 4eyg_A Twin-arginine transloca 57.1 79 0.0027 25.8 9.9 85 16-120 140-236 (368)
334 3ib6_A Uncharacterized protein 57.1 34 0.0012 25.5 6.9 39 91-133 38-79 (189)
335 1v4v_A UDP-N-acetylglucosamine 57.0 81 0.0028 25.9 11.4 59 78-152 275-333 (376)
336 4hjf_A Ggdef family protein; s 56.8 3.7 0.00013 34.9 1.4 73 74-147 244-325 (340)
337 4fo4_A Inosine 5'-monophosphat 56.6 93 0.0032 26.5 10.4 56 77-135 120-176 (366)
338 3tqv_A Nicotinate-nucleotide p 56.6 28 0.00097 28.8 6.6 65 43-133 203-267 (287)
339 3kux_A Putative oxidoreductase 56.1 45 0.0015 27.8 8.2 103 14-150 6-114 (352)
340 3h5o_A Transcriptional regulat 56.1 42 0.0014 27.5 7.9 21 26-46 79-99 (339)
341 1kbi_A Cytochrome B2, L-LCR; f 56.0 60 0.002 29.1 9.2 92 28-138 332-435 (511)
342 3inp_A D-ribulose-phosphate 3- 55.9 6.7 0.00023 31.8 2.7 58 77-135 156-222 (246)
343 3bbl_A Regulatory protein of L 55.7 70 0.0024 25.3 9.0 17 29-45 28-44 (287)
344 1i4n_A Indole-3-glycerol phosp 55.5 80 0.0027 25.4 9.2 86 29-135 140-229 (251)
345 1viz_A PCRB protein homolog; s 55.5 16 0.00054 29.5 4.8 53 78-141 34-89 (240)
346 4hkt_A Inositol 2-dehydrogenas 55.3 56 0.0019 26.9 8.6 103 15-150 3-110 (331)
347 1tlt_A Putative oxidoreductase 55.3 28 0.00095 28.6 6.6 41 108-148 66-110 (319)
348 2i1o_A Nicotinate phosphoribos 54.8 1E+02 0.0036 26.5 10.5 87 28-133 197-295 (398)
349 1rpx_A Protein (ribulose-phosp 54.6 19 0.00064 28.3 5.2 58 77-135 140-206 (230)
350 3g8r_A Probable spore coat pol 54.4 94 0.0032 26.4 9.7 76 28-127 80-155 (350)
351 3r2g_A Inosine 5'-monophosphat 54.4 25 0.00087 30.1 6.2 56 77-135 112-168 (361)
352 2qjg_A Putative aldolase MJ040 53.9 23 0.00079 28.5 5.7 52 77-135 179-236 (273)
353 1y81_A Conserved hypothetical 53.8 27 0.00091 25.2 5.5 109 15-140 14-125 (138)
354 3oix_A Putative dihydroorotate 53.8 28 0.00094 29.6 6.3 40 93-133 262-301 (345)
355 3kjx_A Transcriptional regulat 53.6 51 0.0017 27.0 8.0 20 27-46 86-105 (344)
356 2r6o_A Putative diguanylate cy 53.3 5.8 0.0002 32.9 2.0 95 34-147 171-276 (294)
357 2esr_A Methyltransferase; stru 53.3 47 0.0016 24.2 7.1 67 15-100 54-123 (177)
358 2pz0_A Glycerophosphoryl diest 53.2 29 0.001 27.6 6.2 102 27-136 130-239 (252)
359 1uir_A Polyamine aminopropyltr 52.9 69 0.0024 26.3 8.7 69 15-102 101-184 (314)
360 1mxs_A KDPG aldolase; 2-keto-3 52.9 43 0.0015 26.4 7.0 88 31-139 19-107 (225)
361 3l0g_A Nicotinate-nucleotide p 52.8 31 0.0011 28.8 6.3 54 93-150 195-248 (300)
362 1wbh_A KHG/KDPG aldolase; lyas 52.7 60 0.002 25.3 7.8 55 78-138 42-96 (214)
363 4avf_A Inosine-5'-monophosphat 52.6 28 0.00096 31.0 6.5 56 77-135 241-297 (490)
364 4gx0_A TRKA domain protein; me 52.5 58 0.002 29.2 8.7 113 15-135 127-243 (565)
365 4adt_A Pyridoxine biosynthetic 52.5 95 0.0033 25.7 9.3 82 29-133 14-104 (297)
366 3e3m_A Transcriptional regulat 52.4 39 0.0013 27.9 7.1 20 27-46 88-107 (355)
367 1ydw_A AX110P-like protein; st 52.4 60 0.0021 27.1 8.4 107 13-148 4-116 (362)
368 4gqa_A NAD binding oxidoreduct 52.3 37 0.0013 29.1 7.1 44 107-150 96-143 (412)
369 3etn_A Putative phosphosugar i 52.3 21 0.00071 27.9 5.0 86 16-121 60-149 (220)
370 2l2q_A PTS system, cellobiose- 52.2 39 0.0013 23.2 6.0 75 16-115 5-84 (109)
371 2avd_A Catechol-O-methyltransf 52.0 76 0.0026 24.1 9.3 71 15-101 94-167 (229)
372 3uuw_A Putative oxidoreductase 51.9 72 0.0025 25.9 8.6 105 14-150 5-113 (308)
373 1xx6_A Thymidine kinase; NESG, 51.8 26 0.00089 26.9 5.4 77 14-113 35-114 (191)
374 3usb_A Inosine-5'-monophosphat 51.7 38 0.0013 30.3 7.2 56 77-135 268-324 (511)
375 3w01_A Heptaprenylglyceryl pho 51.6 8.5 0.00029 31.0 2.6 50 78-137 37-88 (235)
376 3gdo_A Uncharacterized oxidore 51.6 68 0.0023 26.8 8.6 44 107-150 65-112 (358)
377 2gk3_A Putative cytoplasmic pr 51.5 21 0.00071 28.8 5.0 33 14-46 9-60 (256)
378 1o4u_A Type II quinolic acid p 51.4 13 0.00043 30.9 3.7 93 18-133 166-265 (285)
379 3d8u_A PURR transcriptional re 51.3 47 0.0016 26.0 7.2 13 31-43 25-37 (275)
380 3cg6_A Growth arrest and DNA-d 51.3 64 0.0022 23.8 7.1 32 25-56 62-93 (146)
381 1k1e_A Deoxy-D-mannose-octulos 51.2 70 0.0024 23.5 8.7 41 93-137 41-81 (180)
382 3e82_A Putative oxidoreductase 51.2 59 0.002 27.3 8.1 103 13-149 5-113 (364)
383 3u3x_A Oxidoreductase; structu 51.0 33 0.0011 29.0 6.4 105 14-150 25-135 (361)
384 3tr6_A O-methyltransferase; ce 50.9 68 0.0023 24.3 7.9 71 15-101 89-162 (225)
385 1req_B Methylmalonyl-COA mutas 50.9 23 0.00079 32.8 5.7 92 28-143 527-625 (637)
386 2qr6_A IMP dehydrogenase/GMP r 50.9 95 0.0032 26.5 9.5 84 31-133 203-303 (393)
387 4gnr_A ABC transporter substra 50.7 98 0.0034 25.2 9.4 88 16-125 145-240 (353)
388 3evn_A Oxidoreductase, GFO/IDH 50.6 19 0.00066 29.9 4.8 43 107-149 67-113 (329)
389 3c3p_A Methyltransferase; NP_9 50.5 78 0.0027 23.8 8.2 66 15-102 81-149 (210)
390 3abi_A Putative uncharacterize 50.5 54 0.0019 27.6 7.8 42 13-56 14-55 (365)
391 3k9c_A Transcriptional regulat 50.4 34 0.0012 27.3 6.2 17 29-45 31-47 (289)
392 4fyk_A Deoxyribonucleoside 5'- 50.2 12 0.00042 27.9 3.1 71 78-154 69-143 (152)
393 3w01_A Heptaprenylglyceryl pho 50.2 30 0.001 27.7 5.7 56 78-138 160-216 (235)
394 3cvo_A Methyltransferase-like 50.0 15 0.00053 28.7 3.8 26 15-40 51-76 (202)
395 2e6f_A Dihydroorotate dehydrog 50.0 22 0.00076 29.4 5.1 39 93-133 232-270 (314)
396 3axs_A Probable N(2),N(2)-dime 49.9 79 0.0027 27.2 8.7 78 16-117 78-160 (392)
397 1vhc_A Putative KHG/KDPG aldol 49.9 70 0.0024 25.2 7.8 57 78-139 43-99 (224)
398 1fy2_A Aspartyl dipeptidase; s 49.8 85 0.0029 24.6 8.4 62 14-102 30-100 (229)
399 3c6k_A Spermine synthase; sper 49.7 64 0.0022 27.8 8.0 57 16-88 229-295 (381)
400 2hsg_A Glucose-resistance amyl 49.6 1E+02 0.0035 24.9 9.5 20 27-46 78-97 (332)
401 1p4c_A L(+)-mandelate dehydrog 49.6 38 0.0013 29.0 6.6 90 27-138 213-310 (380)
402 3paj_A Nicotinate-nucleotide p 49.6 28 0.00096 29.3 5.6 53 93-149 219-271 (320)
403 3l6u_A ABC-type sugar transpor 49.6 67 0.0023 25.3 7.9 66 28-116 27-98 (293)
404 3i1j_A Oxidoreductase, short c 49.3 37 0.0013 26.4 6.1 85 14-115 13-102 (247)
405 3sc6_A DTDP-4-dehydrorhamnose 49.1 71 0.0024 25.2 8.0 31 16-46 6-36 (287)
406 2dul_A N(2),N(2)-dimethylguano 49.1 96 0.0033 26.4 9.1 77 15-115 71-164 (378)
407 1qo2_A Molecule: N-((5-phospho 49.0 14 0.00047 29.3 3.5 39 93-135 63-101 (241)
408 3njr_A Precorrin-6Y methylase; 48.9 67 0.0023 24.4 7.5 64 15-102 77-143 (204)
409 1iy9_A Spermidine synthase; ro 48.9 52 0.0018 26.5 7.2 69 15-102 99-178 (275)
410 2gjl_A Hypothetical protein PA 48.8 68 0.0023 26.6 8.0 49 77-135 96-144 (328)
411 3h2s_A Putative NADH-flavin re 48.7 33 0.0011 26.0 5.7 35 16-50 1-36 (224)
412 4f3h_A Fimxeal, putative uncha 48.6 85 0.0029 24.6 8.3 89 32-139 149-248 (250)
413 3m9w_A D-xylose-binding peripl 48.5 81 0.0028 25.2 8.4 19 27-45 20-38 (313)
414 2b2c_A Spermidine synthase; be 48.4 55 0.0019 27.1 7.3 68 16-102 133-211 (314)
415 2pju_A Propionate catabolism o 48.4 99 0.0034 24.4 14.5 121 15-151 12-151 (225)
416 3moi_A Probable dehydrogenase; 48.4 66 0.0023 27.2 8.0 43 108-150 65-111 (387)
417 4af0_A Inosine-5'-monophosphat 48.3 25 0.00087 31.9 5.4 56 75-133 291-347 (556)
418 3l0g_A Nicotinate-nucleotide p 48.1 38 0.0013 28.2 6.1 66 42-133 211-276 (300)
419 3kke_A LACI family transcripti 48.1 57 0.0019 26.1 7.3 20 27-46 33-52 (303)
420 4fb5_A Probable oxidoreductase 48.0 68 0.0023 26.7 8.0 44 107-150 94-141 (393)
421 2yy8_A ATRM56, UPF0106 protein 47.8 20 0.00069 27.7 4.0 87 15-124 30-119 (201)
422 1me8_A Inosine-5'-monophosphat 47.6 1.1E+02 0.0037 27.2 9.5 28 107-134 352-379 (503)
423 2g1u_A Hypothetical protein TM 47.6 31 0.0011 24.9 5.1 40 14-54 18-57 (155)
424 3iwt_A 178AA long hypothetical 47.3 22 0.00076 26.7 4.3 25 26-50 40-67 (178)
425 3beo_A UDP-N-acetylglucosamine 47.2 1.2E+02 0.0039 24.8 12.5 59 78-152 283-341 (375)
426 3lkb_A Probable branched-chain 47.2 77 0.0026 26.3 8.2 86 15-122 143-239 (392)
427 3v5n_A Oxidoreductase; structu 47.1 1.4E+02 0.0047 25.6 10.4 44 107-150 110-157 (417)
428 1jub_A Dihydroorotate dehydrog 47.1 28 0.00095 28.7 5.2 40 93-133 229-268 (311)
429 3ffs_A Inosine-5-monophosphate 47.0 35 0.0012 29.6 6.0 56 76-135 155-211 (400)
430 2h6r_A Triosephosphate isomera 47.0 99 0.0034 24.0 9.6 40 94-135 159-198 (219)
431 2pr7_A Haloacid dehalogenase/e 47.0 39 0.0013 23.1 5.4 50 80-133 4-60 (137)
432 1viz_A PCRB protein homolog; s 46.7 37 0.0013 27.2 5.7 55 79-137 157-211 (240)
433 3ip3_A Oxidoreductase, putativ 46.6 67 0.0023 26.6 7.6 32 119-150 81-114 (337)
434 2fep_A Catabolite control prot 46.3 81 0.0028 25.0 7.9 17 29-45 36-52 (289)
435 1o2d_A Alcohol dehydrogenase, 46.3 55 0.0019 27.8 7.1 66 16-102 41-120 (371)
436 3gbv_A Putative LACI-family tr 46.2 81 0.0028 24.9 7.9 65 28-115 28-102 (304)
437 2kpo_A Rossmann 2X2 fold prote 45.8 61 0.0021 21.3 6.1 45 16-60 3-47 (110)
438 2c6q_A GMP reductase 2; TIM ba 45.5 31 0.0011 29.3 5.4 54 78-134 133-187 (351)
439 3zwt_A Dihydroorotate dehydrog 45.4 31 0.0011 29.6 5.4 41 93-134 285-325 (367)
440 3o26_A Salutaridine reductase; 45.3 51 0.0018 26.4 6.6 84 14-116 11-100 (311)
441 3hut_A Putative branched-chain 45.3 79 0.0027 25.7 7.9 85 16-122 140-235 (358)
442 1lnq_A MTHK channels, potassiu 45.2 84 0.0029 25.9 8.1 111 16-134 116-229 (336)
443 3e05_A Precorrin-6Y C5,15-meth 45.1 80 0.0027 23.6 7.4 66 16-103 65-132 (204)
444 2ew2_A 2-dehydropantoate 2-red 45.1 80 0.0027 25.3 7.8 39 16-55 4-42 (316)
445 3fhl_A Putative oxidoreductase 45.0 36 0.0012 28.6 5.8 44 107-150 65-112 (362)
446 2nvw_A Galactose/lactose metab 44.9 74 0.0025 28.1 8.0 43 107-149 108-160 (479)
447 3fwz_A Inner membrane protein 44.8 79 0.0027 22.2 7.1 41 15-56 7-47 (140)
448 2o3a_A UPF0106 protein AF_0751 44.7 43 0.0015 25.4 5.3 80 15-122 33-114 (178)
449 3fxa_A SIS domain protein; str 44.7 25 0.00086 26.7 4.3 83 17-121 47-133 (201)
450 3c1a_A Putative oxidoreductase 44.4 70 0.0024 26.1 7.4 32 118-149 82-115 (315)
451 3jr2_A Hexulose-6-phosphate sy 44.3 10 0.00035 29.8 2.0 8 39-46 31-38 (218)
452 2dri_A D-ribose-binding protei 44.3 93 0.0032 24.3 7.9 64 28-115 20-90 (271)
453 3ntv_A MW1564 protein; rossman 44.2 49 0.0017 25.6 6.1 68 14-102 94-165 (232)
454 1xea_A Oxidoreductase, GFO/IDH 44.1 83 0.0029 25.7 7.8 38 16-53 3-41 (323)
455 1i1q_B Anthranilate synthase c 44.1 40 0.0014 25.5 5.4 33 16-48 1-33 (192)
456 3l9w_A Glutathione-regulated p 43.9 65 0.0022 27.9 7.3 100 15-142 4-107 (413)
457 4gj1_A 1-(5-phosphoribosyl)-5- 43.8 53 0.0018 26.1 6.3 63 80-145 168-239 (243)
458 4htf_A S-adenosylmethionine-de 43.8 67 0.0023 25.5 7.1 28 75-102 134-162 (285)
459 3vkj_A Isopentenyl-diphosphate 43.8 83 0.0028 26.8 7.8 41 92-135 175-217 (368)
460 3lab_A Putative KDPG (2-keto-3 43.7 83 0.0028 24.8 7.2 67 44-135 118-186 (217)
461 3qhp_A Type 1 capsular polysac 43.7 84 0.0029 22.2 11.5 107 14-152 31-139 (166)
462 3oy2_A Glycosyltransferase B73 43.7 1.1E+02 0.0036 25.6 8.6 63 79-152 275-354 (413)
463 1tqj_A Ribulose-phosphate 3-ep 43.7 8.1 0.00028 30.8 1.3 59 77-136 134-201 (230)
464 2y88_A Phosphoribosyl isomeras 43.6 44 0.0015 26.2 5.8 40 94-136 64-103 (244)
465 3clk_A Transcription regulator 43.5 62 0.0021 25.6 6.8 17 29-45 28-44 (290)
466 3gnl_A Uncharacterized protein 43.1 56 0.0019 26.2 6.3 88 16-127 46-137 (244)
467 3bwc_A Spermidine synthase; SA 43.1 1.2E+02 0.004 24.8 8.5 69 16-102 120-199 (304)
468 3ohs_X Trans-1,2-dihydrobenzen 43.1 1.2E+02 0.004 25.0 8.6 44 107-150 66-113 (334)
469 1kjq_A GART 2, phosphoribosylg 42.9 67 0.0023 26.9 7.2 34 12-46 8-41 (391)
470 1jcn_A Inosine monophosphate d 42.7 71 0.0024 28.4 7.5 57 76-135 266-323 (514)
471 1wbh_A KHG/KDPG aldolase; lyas 42.6 1.2E+02 0.004 23.6 8.9 71 38-133 108-182 (214)
472 2rgy_A Transcriptional regulat 42.5 1E+02 0.0035 24.3 8.0 16 30-45 29-44 (290)
473 3sy8_A ROCR; TIM barrel phosph 42.2 32 0.0011 29.3 5.1 72 74-146 308-388 (400)
474 3r75_A Anthranilate/para-amino 42.1 63 0.0022 29.9 7.2 32 15-46 446-477 (645)
475 1fxw_F Alpha2, platelet-activa 42.0 72 0.0025 24.4 6.8 86 14-116 38-140 (229)
476 3tdn_A FLR symmetric alpha-bet 41.9 5.4 0.00018 31.9 0.0 40 93-135 189-228 (247)
477 4fzr_A SSFS6; structural genom 41.8 1E+02 0.0034 25.7 8.1 76 12-114 12-151 (398)
478 1o4u_A Type II quinolic acid p 41.8 51 0.0018 27.2 6.0 55 93-150 180-234 (285)
479 3ecs_A Translation initiation 41.6 1.4E+02 0.0047 24.9 8.6 80 13-116 145-232 (315)
480 3lec_A NADB-rossmann superfami 41.4 67 0.0023 25.5 6.5 87 16-127 46-137 (230)
481 2d59_A Hypothetical protein PH 41.2 53 0.0018 23.7 5.5 100 15-131 22-126 (144)
482 3khj_A Inosine-5-monophosphate 41.1 1.6E+02 0.0056 24.8 10.4 55 77-135 117-172 (361)
483 3rot_A ABC sugar transporter, 40.9 1.2E+02 0.0041 24.0 8.2 66 28-116 22-95 (297)
484 1mxs_A KDPG aldolase; 2-keto-3 40.9 1.1E+02 0.0036 24.1 7.6 72 38-134 118-193 (225)
485 3m6w_A RRNA methylase; rRNA me 40.9 67 0.0023 28.4 7.0 54 15-87 126-180 (464)
486 3btv_A Galactose/lactose metab 40.9 39 0.0013 29.4 5.4 44 107-150 89-142 (438)
487 3o74_A Fructose transport syst 40.7 90 0.0031 24.1 7.3 22 92-116 108-129 (272)
488 3lop_A Substrate binding perip 40.4 56 0.0019 26.9 6.2 79 16-116 142-231 (364)
489 1x1o_A Nicotinate-nucleotide p 40.3 50 0.0017 27.2 5.7 53 93-148 183-235 (286)
490 3ctl_A D-allulose-6-phosphate 40.3 25 0.00086 28.0 3.8 59 77-136 128-195 (231)
491 3nl6_A Thiamine biosynthetic b 40.3 2.1E+02 0.0071 25.8 10.7 74 44-134 114-207 (540)
492 2glx_A 1,5-anhydro-D-fructose 40.2 98 0.0033 25.3 7.7 41 108-148 63-107 (332)
493 1vli_A Spore coat polysacchari 40.1 96 0.0033 26.7 7.6 94 26-143 101-204 (385)
494 3gx8_A Monothiol glutaredoxin- 40.1 92 0.0031 21.6 7.3 72 25-116 3-83 (121)
495 3brq_A HTH-type transcriptiona 40.0 1.3E+02 0.0045 23.4 9.7 20 27-46 39-58 (296)
496 2wqp_A Polysialic acid capsule 39.9 1.1E+02 0.0038 26.0 7.9 81 24-128 89-169 (349)
497 3ipc_A ABC transporter, substr 39.9 66 0.0023 26.2 6.6 102 17-140 140-252 (356)
498 2nv1_A Pyridoxal biosynthesis 39.8 13 0.00046 30.7 2.2 41 92-135 195-237 (305)
499 3tsm_A IGPS, indole-3-glycerol 39.7 1.2E+02 0.0042 24.6 8.0 68 81-152 98-167 (272)
500 2fli_A Ribulose-phosphate 3-ep 39.7 64 0.0022 24.7 6.1 89 46-152 16-107 (220)
No 1
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=99.96 E-value=2.7e-29 Score=191.20 Aligned_cols=122 Identities=28% Similarity=0.557 Sum_probs=110.5
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCCCE-EEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSSYQ-VTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g~~-v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
....+|||||||++..|..+..+|+..||. |..+.+|.+|++.+.... ||+||+|+.||+|
T Consensus 9 m~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~~~~~~------------------~DlillD~~MP~m 70 (134)
T 3to5_A 9 LNKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGD------------------FDFVVTDWNMPGM 70 (134)
T ss_dssp CCTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHC------------------CSEEEEESCCSSS
T ss_pred hCCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHHHHhCC------------------CCEEEEcCCCCCC
Confidence 345689999999999999999999999996 668999999999996544 5699999999999
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
||++++++||.....+++|||++|+..+.+...+++++||++||.|||+.++|...+.+++
T Consensus 71 dG~el~~~ir~~~~~~~ipvI~lTa~~~~~~~~~~~~~Ga~~yl~KP~~~~~L~~~i~~~l 131 (134)
T 3to5_A 71 QGIDLLKNIRADEELKHLPVLMITAEAKREQIIEAAQAGVNGYIVKPFTAATLKEKLDKIF 131 (134)
T ss_dssp CHHHHHHHHHHSTTTTTCCEEEEESSCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHC
T ss_pred CHHHHHHHHHhCCCCCCCeEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHH
Confidence 9999999999877677999999999999999999999999999999999999987776654
No 2
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=99.93 E-value=2.3e-24 Score=160.18 Aligned_cols=118 Identities=32% Similarity=0.480 Sum_probs=107.7
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
.+||||||++..+..+..+|+..||.|..+.++.+|++.+.... ||+||+|+.||+++|+++
T Consensus 3 ~~ILivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~al~~l~~~~------------------~dlvllD~~~p~~~g~~~ 64 (122)
T 3gl9_A 3 KKVLLVDDSAVLRKIVSFNLKKEGYEVIEAENGQIALEKLSEFT------------------PDLIVLXIMMPVMDGFTV 64 (122)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHTTBC------------------CSEEEECSCCSSSCHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHHhcC------------------CCEEEEeccCCCCcHHHH
Confidence 58999999999999999999999999999999999999996544 559999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
+++|+.....+++|||++|+..+.....++++.||++||.||++.++|...+.+++
T Consensus 65 ~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~i~~~l 120 (122)
T 3gl9_A 65 LKKLQEKEEWKRIPVIVLTAKGGEEDESLALSLGARKVMRKPFSPSQFIEEVKHLL 120 (122)
T ss_dssp HHHHHTSTTTTTSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHhcccccCCCEEEEecCCchHHHHHHHhcChhhhccCCCCHHHHHHHHHHHh
Confidence 99999876556899999999999999999999999999999999999987766654
No 3
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=99.92 E-value=7.5e-27 Score=174.99 Aligned_cols=114 Identities=20% Similarity=0.271 Sum_probs=99.6
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
++.++|||||||++..+..+..+|+..||.|+ ++.+|.+|++.+.... ||+||+|+.||+|
T Consensus 5 ~~r~~rILiVdD~~~~~~~l~~~L~~~G~~v~~~a~~g~eAl~~~~~~~------------------~DlvllDi~mP~~ 66 (123)
T 2lpm_A 5 TERRLRVLVVEDESMIAMLIEDTLCELGHEVAATASRMQEALDIARKGQ------------------FDIAIIDVNLDGE 66 (123)
T ss_dssp CCCCCCEEEESSSTTTSHHHHHHHHHHCCCCCBCSCCHHHHHHHHHHCC------------------SSEEEECSSSSSC
T ss_pred CCCCCEEEEEeCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhCC------------------CCEEEEecCCCCC
Confidence 56679999999999999999999999999986 7899999999996554 5599999999999
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHL 150 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l 150 (241)
||+++++.||+. ++|||++|++.+... +.++|+++||.|||+.++|...+.++
T Consensus 67 ~G~el~~~lr~~----~ipvI~lTa~~~~~~---~~~~g~~~yl~KP~~~~~L~~~l~~~ 119 (123)
T 2lpm_A 67 PSYPVADILAER----NVPFIFATGYGSKGL---DTRYSNIPLLTKPFLDSELEAVLVQI 119 (123)
T ss_dssp CSHHHHHHHHHT----CCSSCCBCTTCTTSC---CSSSCSCSCBCSSSSHHHHHHHHSTT
T ss_pred CHHHHHHHHHcC----CCCEEEEecCccHHH---HHhCCCCcEEECCCCHHHHHHHHHHH
Confidence 999999999973 689999999876543 34679999999999999997766544
No 4
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=99.92 E-value=4.6e-24 Score=161.44 Aligned_cols=121 Identities=23% Similarity=0.437 Sum_probs=109.4
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
..+||||||++..+..+..+|+..||.|..+.++.+|++.+.... ||+||+|+.||+++|++
T Consensus 4 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~------------------~dlvl~D~~lp~~~g~~ 65 (136)
T 3t6k_A 4 PHTLLIVDDDDTVAEMLELVLRGAGYEVRRAASGEEALQQIYKNL------------------PDALICDVLLPGIDGYT 65 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSC------------------CSEEEEESCCSSSCHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCC------------------CCEEEEeCCCCCCCHHH
Confidence 579999999999999999999999999999999999999996544 55999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
++++|+.....+.+|||++|+..+.....++++.||++||.||++.++|...+..++.+
T Consensus 66 ~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~l~~ 124 (136)
T 3t6k_A 66 LCKRVRQHPLTKTLPILMLTAQGDISAKIAGFEAGANDYLAKPFEPQELVYRVKNILAR 124 (136)
T ss_dssp HHHHHHHSGGGTTCCEEEEECTTCHHHHHHHHHHTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred HHHHHHcCCCcCCccEEEEecCCCHHHHHHHHhcCcceEEeCCCCHHHHHHHHHHHHhc
Confidence 99999986444589999999999999999999999999999999999998777766543
No 5
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=99.90 E-value=4.7e-23 Score=154.22 Aligned_cols=121 Identities=28% Similarity=0.538 Sum_probs=106.9
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCE-EEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQ-VTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~-v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
..++||||||++..+..+..+|+..||. |..+.++.+|++.+... ..||+||+|+.||+++|
T Consensus 4 ~~~~iLivdd~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~~~~~-----------------~~~dlvi~D~~~p~~~g 66 (129)
T 3h1g_A 4 GSMKLLVVDDSSTMRRIIKNTLSRLGYEDVLEAEHGVEAWEKLDAN-----------------ADTKVLITDWNMPEMNG 66 (129)
T ss_dssp --CCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHC-----------------TTCCEEEECSCCSSSCH
T ss_pred CCcEEEEEeCCHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHhC-----------------CCCCEEEEeCCCCCCCH
Confidence 3589999999999999999999999995 88999999999988532 23569999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
++++++|+.....+.+|||++|+..+.....++++.||++||.||++.++|...+..++
T Consensus 67 ~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~l~~~l 125 (129)
T 3h1g_A 67 LDLVKKVRSDSRFKEIPIIMITAEGGKAEVITALKAGVNNYIVKPFTPQVLKEKLEVVL 125 (129)
T ss_dssp HHHHHHHHTSTTCTTCCEEEEESCCSHHHHHHHHHHTCCEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCeEEEEeCCCChHHHHHHHHcCccEEEeCCCCHHHHHHHHHHHh
Confidence 99999999866556899999999999999999999999999999999999987776654
No 6
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=99.90 E-value=2e-23 Score=166.14 Aligned_cols=121 Identities=15% Similarity=0.291 Sum_probs=109.6
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
.+.+||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|+
T Consensus 6 ~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~------------------~dlvl~D~~lp~~~g~ 67 (184)
T 3rqi_A 6 SDKNFLVIDDNEVFAGTLARGLERRGYAVRQAHNKDEALKLAGAEK------------------FEFITVXLHLGNDSGL 67 (184)
T ss_dssp -CCEEEEECSCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHTTSC------------------CSEEEECSEETTEESH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHhhCC------------------CCEEEEeccCCCccHH
Confidence 4689999999999999999999999999999999999999996544 5599999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
++++.|+...+ ++|||++|+..+.+....+++.||++||.||++.++|...+..++...
T Consensus 68 ~~~~~l~~~~~--~~~ii~lt~~~~~~~~~~a~~~Ga~~~l~KP~~~~~L~~~i~~~~~~~ 126 (184)
T 3rqi_A 68 SLIAPLCDLQP--DARILVLTGYASIATAVQAVKDGADNYLAKPANVESILAALQTNASEV 126 (184)
T ss_dssp HHHHHHHHHCT--TCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHTSTTHHHH
T ss_pred HHHHHHHhcCC--CCCEEEEeCCCCHHHHHHHHHhCHHHheeCCCCHHHHHHHHHHHHHHh
Confidence 99999998754 899999999999999999999999999999999999988777665543
No 7
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=99.90 E-value=5e-23 Score=152.29 Aligned_cols=115 Identities=21% Similarity=0.404 Sum_probs=104.2
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
.+||||||++..+..+...|+..||.|..+.++.+|++.+.... ||+||+|+.||+++|+++
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~------------------~dlii~D~~~p~~~g~~~ 64 (120)
T 3f6p_A 3 KKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNEAVEMVEELQ------------------PDLILLDIMLPNKDGVEV 64 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTTC------------------CSEEEEETTSTTTHHHHH
T ss_pred CeEEEEECCHHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHhhCC------------------CCEEEEeCCCCCCCHHHH
Confidence 58999999999999999999999999999999999999996544 559999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
+++|+... ++|||++|+..+......+++.||++||.||++.++|...+..++
T Consensus 65 ~~~lr~~~---~~~ii~~t~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~l 117 (120)
T 3f6p_A 65 CREVRKKY---DMPIIMLTAKDSEIDKVIGLEIGADDYVTKPFSTRELLARVKANL 117 (120)
T ss_dssp HHHHHTTC---CSCEEEEEESSCHHHHHHHHHTTCCEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHhcC---CCCEEEEECCCChHHHHHHHhCCcceeEcCCCCHHHHHHHHHHHH
Confidence 99999742 789999999999999999999999999999999999977665544
No 8
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=99.90 E-value=1.3e-22 Score=156.65 Aligned_cols=123 Identities=32% Similarity=0.539 Sum_probs=110.6
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
....+||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|
T Consensus 5 ~~~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~------------------~dlii~D~~l~~~~g 66 (154)
T 3gt7_A 5 NRAGEILIVEDSPTQAEHLKHILEETGYQTEHVRNGREAVRFLSLTR------------------PDLIISDVLMPEMDG 66 (154)
T ss_dssp --CCEEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHTTCC------------------CSEEEEESCCSSSCH
T ss_pred cCCCcEEEEeCCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHHhCC------------------CCEEEEeCCCCCCCH
Confidence 45689999999999999999999999999999999999999996543 569999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
+++++.|+.....+.+|||++|+..+......+++.|+++||.||++.++|...+..++..
T Consensus 67 ~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~ 127 (154)
T 3gt7_A 67 YALCRWLKGQPDLRTIPVILLTILSDPRDVVRSLECGADDFITKPCKDVVLASHVKRLLSG 127 (154)
T ss_dssp HHHHHHHHHSTTTTTSCEEEEECCCSHHHHHHHHHHCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCcCCCCEEEEECCCChHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHHH
Confidence 9999999987655689999999999999999999999999999999999998877776644
No 9
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=99.90 E-value=1.4e-22 Score=156.06 Aligned_cols=123 Identities=21% Similarity=0.347 Sum_probs=111.4
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
...+.+||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++
T Consensus 11 ~~~~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~------------------~dlvi~D~~l~~~~ 72 (153)
T 3hv2_A 11 VTRRPEILLVDSQEVILQRLQQLLSPLPYTLHFARDATQALQLLASRE------------------VDLVISAAHLPQMD 72 (153)
T ss_dssp CCSCCEEEEECSCHHHHHHHHHHHTTSSCEEEEESSHHHHHHHHHHSC------------------CSEEEEESCCSSSC
T ss_pred ccCCceEEEECCCHHHHHHHHHHhcccCcEEEEECCHHHHHHHHHcCC------------------CCEEEEeCCCCcCc
Confidence 345689999999999999999999999999999999999999996544 55999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhc-ccccccCCCCHHHHHHhhHHHHHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEG-AEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~G-a~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
|+++++.|+...+ .+|||++|+..+......++..| +++||.||++.++|...+..++..+
T Consensus 73 g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~l~~~i~~~l~~~ 134 (153)
T 3hv2_A 73 GPTLLARIHQQYP--STTRILLTGDPDLKLIAKAINEGEIYRYLSKPWDDQELLLALRQALEHQ 134 (153)
T ss_dssp HHHHHHHHHHHCT--TSEEEEECCCCCHHHHHHHHHTTCCSEEECSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHCC--CCeEEEEECCCCHHHHHHHHhCCCcceEEeCCCCHHHHHHHHHHHHHHh
Confidence 9999999998654 89999999999999999999999 9999999999999988877776544
No 10
>2r25_B Osmosensing histidine protein kinase SLN1; alpha5-BETA5, response regulator, four helix bundle, histidine phosphotransfer (HPT) protein; 1.70A {Saccharomyces cerevisiae} SCOP: c.23.1.1 PDB: 1oxk_B 1oxb_B
Probab=99.90 E-value=8.9e-23 Score=153.74 Aligned_cols=123 Identities=22% Similarity=0.405 Sum_probs=104.8
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCC-EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSY-QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
.++||||||++..+..+..+|+..|| .|..+.++.+|++.+....+ ....||+||+|+.||+++|+
T Consensus 2 ~~~ILivdD~~~~~~~l~~~L~~~g~~~v~~~~~~~~al~~~~~~~~-------------~~~~~dlvllD~~mp~~~G~ 68 (133)
T 2r25_B 2 SVKILVVEDNHVNQEVIKRMLNLEGIENIELACDGQEAFDKVKELTS-------------KGENYNMIFMDVQMPKVDGL 68 (133)
T ss_dssp CSCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHHH-------------HTCCCSEEEECSCCSSSCHH
T ss_pred CceEEEEcCCHHHHHHHHHHHHHcCCceEEEECCHHHHHHHHHHHHh-------------cCCCCCEEEEeCCCCCCChH
Confidence 47899999999999999999998897 47889999999998864110 01246799999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
++++.|+.... ..+|||++|+..+.....++++.||++||.||++.++|...+..++
T Consensus 69 ~~~~~lr~~~~-~~~~ii~lt~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~ 125 (133)
T 2r25_B 69 LSTKMIRRDLG-YTSPIVALTAFADDSNIKECLESGMNGFLSKPIKRPKLKTILTEFC 125 (133)
T ss_dssp HHHHHHHHHSC-CCSCEEEEESCCSHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHC
T ss_pred HHHHHHHhhcC-CCCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHH
Confidence 99999997432 3689999999999999999999999999999999999987766553
No 11
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=99.90 E-value=1.2e-22 Score=155.08 Aligned_cols=120 Identities=32% Similarity=0.558 Sum_probs=104.2
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
..++||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|+
T Consensus 13 ~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~------------------~dlvl~D~~mp~~~g~ 74 (143)
T 3m6m_D 13 RSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMAEED------------------YDAVIVDLHMPGMNGL 74 (143)
T ss_dssp --CEEEEECSSHHHHHHHHHHHHC--CEEEEESSHHHHHHHHHHSC------------------CSEEEEESCCSSSCHH
T ss_pred ccceEEEEeCCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCC------------------CCEEEEeCCCCCCCHH
Confidence 4589999999999999999999999999999999999999986544 5599999999999999
Q ss_pred HHHHHHHhc--CCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 94 DLLKKIKES--SSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 94 ~ll~~ir~~--~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
+++++||.. ...+.+|||++|+..+......+++.||++||.||++.++|...+..+.
T Consensus 75 ~~~~~lr~~~~~~~~~~pii~~s~~~~~~~~~~~~~~Ga~~~l~KP~~~~~L~~~l~~~~ 134 (143)
T 3m6m_D 75 DMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAGARAFLAKPVVAAKLLDTLADLA 134 (143)
T ss_dssp HHHHHHHHHHHTTCCCCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHC
T ss_pred HHHHHHHhchhccCCCCeEEEEeCCCCHHHHHHHHHcChhheeeCCCCHHHHHHHHHHHH
Confidence 999999853 2235789999999999999999999999999999999999987776654
No 12
>3crn_A Response regulator receiver domain protein, CHEY-; structural genomics, signal regulator receiver domain; HET: PHD; 1.58A {Methanospirillum hungatei jf-1}
Probab=99.89 E-value=3e-22 Score=150.39 Aligned_cols=119 Identities=20% Similarity=0.296 Sum_probs=107.9
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
+.+||||||++..+..+..+|+..||.|..+.++.++++.+.... ||+||+|+.||+++|++
T Consensus 3 ~~~Ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~------------------~dlvl~D~~l~~~~g~~ 64 (132)
T 3crn_A 3 LKRILIVDDDTAILDSTKQILEFEGYEVEIAATAGEGLAKIENEF------------------FNLALFXIKLPDMEGTE 64 (132)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSC------------------CSEEEECSBCSSSBHHH
T ss_pred ccEEEEEeCCHHHHHHHHHHHHHCCceEEEeCCHHHHHHHHhcCC------------------CCEEEEecCCCCCchHH
Confidence 478999999999999999999999999999999999999986544 55999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
+++.|++..+ .+|||++|+..+......+++.||++||.||++.++|...+..++..
T Consensus 65 ~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~~ 121 (132)
T 3crn_A 65 LLEKAHKLRP--GMKKIMVTGYASLENSVFSLNAGADAYIMKPVNPRDLLEKIKEKLDE 121 (132)
T ss_dssp HHHHHHHHCT--TSEEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCC--CCcEEEEeccccHHHHHHHHhccchhhccCCCCHHHHHHHHHHHHhc
Confidence 9999998654 89999999999999999999999999999999999998877776544
No 13
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=99.89 E-value=3.1e-22 Score=152.22 Aligned_cols=124 Identities=23% Similarity=0.396 Sum_probs=111.0
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCE--EEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQ--VTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~--v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
.+++||||||++..+..+..+|...|+. |..+.++.+|++.+.... ||+||+|+.||+++
T Consensus 4 ~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~------------------~dlii~D~~l~~~~ 65 (144)
T 3kht_A 4 RSKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAK------------------YDLIILDIGLPIAN 65 (144)
T ss_dssp -CEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCC------------------CSEEEECTTCGGGC
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCC------------------CCEEEEeCCCCCCC
Confidence 4689999999999999999999999987 889999999999996544 56999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCC-CHHHHHHhhHHHHHHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPV-RLSDLNKLKPHLMKTKI 155 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~-~~~~L~~~~~~l~~~~~ 155 (241)
|+++++.|+.....+.+|||++|+..+.....++++.|+++||.||+ +.++|...+..+++.+.
T Consensus 66 g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~i~~~l~~~~ 130 (144)
T 3kht_A 66 GFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGRIYAIFSYWL 130 (144)
T ss_dssp HHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHHHHHHHHHHHH
Confidence 99999999985445689999999999999999999999999999999 99999888887776553
No 14
>1i3c_A Response regulator RCP1; phytochrome, signaling protein; 1.90A {Synechocystis SP} SCOP: c.23.1.1 PDB: 1jlk_A
Probab=99.89 E-value=5.8e-22 Score=151.98 Aligned_cols=130 Identities=25% Similarity=0.398 Sum_probs=109.8
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCC--EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSY--QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
..++||||||++..+..+..+|+..|+ .|..+.++.+|++.+...... .....||+||+|+.||+++
T Consensus 7 ~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~~-----------~~~~~~dlillD~~lp~~~ 75 (149)
T 1i3c_A 7 PPKVILLVEDSKADSRLVQEVLKTSTIDHELIILRDGLAAMAFLQQQGEY-----------ENSPRPNLILLDLNLPKKD 75 (149)
T ss_dssp CCEEEEEECCCHHHHHHHHHHHHSCCSCEEEEEECSHHHHHHHHTTCGGG-----------TTCCCCSEEEECSCCSSSC
T ss_pred CCCeEEEEECCHHHHHHHHHHHHhcCCCccEEEeCCHHHHHHHHHhcccc-----------ccCCCCCEEEEeCCCCCCc
Confidence 458999999999999999999998887 788999999999998642100 0013477999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
|+++++.|++....+.+|||++|+..+...+.++++.||++||.||++.++|...+..+.+.+
T Consensus 76 g~~l~~~l~~~~~~~~~piiils~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~~~ 138 (149)
T 1i3c_A 76 GREVLAEIKQNPDLKRIPVVVLTTSHNEDDVIASYELHVNCYLTKSRNLKDLFKMVQGIESFW 138 (149)
T ss_dssp HHHHHHHHHHCTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCcCcCCCeEEEEECCCChHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHHHH
Confidence 999999999865445899999999999899999999999999999999999988777765433
No 15
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=99.89 E-value=9e-23 Score=154.05 Aligned_cols=121 Identities=16% Similarity=0.180 Sum_probs=109.0
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC--CC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG--MT 91 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~--~~ 91 (241)
...+||||||++..+..+..+|+..||.|..+.++.+|++.+.. ..||+||+|+.||+ ++
T Consensus 5 ~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~------------------~~~dlvi~D~~l~~~~~~ 66 (136)
T 3kto_A 5 HHPIIYLVDHQKDARAALSKLLSPLDVTIQCFASAESFMRQQIS------------------DDAIGMIIEAHLEDKKDS 66 (136)
T ss_dssp --CEEEEECSCHHHHHHHHHHHTTSSSEEEEESSHHHHTTSCCC------------------TTEEEEEEETTGGGBTTH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHhc------------------cCCCEEEEeCcCCCCCcc
Confidence 46899999999999999999999999999999999999988753 34679999999999 99
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
|+++++.|+...+ ++|||++|+..+.....++++.|+++||.||++.++|...+.++....
T Consensus 67 g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~~~~ 127 (136)
T 3kto_A 67 GIELLETLVKRGF--HLPTIVMASSSDIPTAVRAMRASAADFIEKPFIEHVLVHDVQQIINGA 127 (136)
T ss_dssp HHHHHHHHHHTTC--CCCEEEEESSCCHHHHHHHHHTTCSEEEESSBCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC--CCCEEEEEcCCCHHHHHHHHHcChHHheeCCCCHHHHHHHHHHHHhcc
Confidence 9999999998764 899999999999999999999999999999999999988887776554
No 16
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=99.89 E-value=5.4e-22 Score=147.64 Aligned_cols=121 Identities=28% Similarity=0.528 Sum_probs=106.7
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCC-EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSY-QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
..++||||||++..+..+..+|...|| .|..+.++.++++.+... .||+||+|+.||+++|
T Consensus 3 ~~~~ilivdd~~~~~~~l~~~l~~~~~~~v~~~~~~~~a~~~~~~~------------------~~dlvi~D~~l~~~~g 64 (128)
T 1jbe_A 3 KELKFLVVDDFSTMRRIVRNLLKELGFNNVEEAEDGVDALNKLQAG------------------GYGFVISDWNMPNMDG 64 (128)
T ss_dssp TTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHTTC------------------CCCEEEEESCCSSSCH
T ss_pred CccEEEEECCCHHHHHHHHHHHHHcCCcEEEeeCCHHHHHHHHHhc------------------CCCEEEEeCCCCCCCH
Confidence 457899999999999999999999999 788999999999998543 3569999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+++++.|+.....+.+|||++|+..+......+++.|+++|+.||++.++|...+..++.
T Consensus 65 ~~l~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~~ 124 (128)
T 1jbe_A 65 LELLKTIRAXXAMSALPVLMVTAEAKKENIIAAAQAGASGYVVKPFTAATLEEKLNKIFE 124 (128)
T ss_dssp HHHHHHHHC--CCTTCCEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCCCcEEEEecCccHHHHHHHHHhCcCceeecCCCHHHHHHHHHHHHH
Confidence 999999998544458999999999999999999999999999999999999877766653
No 17
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=99.89 E-value=5.4e-22 Score=146.07 Aligned_cols=117 Identities=20% Similarity=0.415 Sum_probs=106.1
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
++||||||++..+..+...|...||.|..+.++.+|+..+.... ||+||+|+.||+++|+++
T Consensus 1 ~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~~------------------~dlil~D~~l~~~~g~~~ 62 (121)
T 2pl1_A 1 MRVLVVEDNALLRHHLKVQIQDAGHQVDDAEDAKEADYYLNEHI------------------PDIAIVDLGLPDEDGLSL 62 (121)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSC------------------CSEEEECSCCSSSCHHHH
T ss_pred CeEEEEeCcHHHHHHHHHHHhhcCCEEEEeCCHHHHHHHHhccC------------------CCEEEEecCCCCCCHHHH
Confidence 47999999999999999999999999999999999999986544 459999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
++.++...+ .+|||++|+..+......+++.|+++|+.||++.++|...+..+++
T Consensus 63 ~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 117 (121)
T 2pl1_A 63 IRRWRSNDV--SLPILVLTARESWQDKVEVLSAGADDYVTKPFHIEEVMARMQALMR 117 (121)
T ss_dssp HHHHHHTTC--CSCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHhcCC--CCCEEEEecCCCHHHHHHHHHcCccceEECCCCHHHHHHHHHHHHH
Confidence 999998654 7999999999999999999999999999999999999877766654
No 18
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=99.89 E-value=1.1e-23 Score=158.74 Aligned_cols=121 Identities=12% Similarity=0.096 Sum_probs=107.8
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCC-CEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSS-YQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g-~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
...+.+||||||++..+..+..+|+..| |.|..+.++.+|++.+... .||+||+|+.||++
T Consensus 11 ~~~~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~l~~~------------------~~dlvi~D~~l~~~ 72 (135)
T 3snk_A 11 PTKRKQVALFSSDPNFKRDVATRLDALAIYDVRVSETDDFLKGPPADT------------------RPGIVILDLGGGDL 72 (135)
T ss_dssp --CCEEEEEECSCHHHHHHHHHHHHHTSSEEEEEECGGGGGGCCCTTC------------------CCSEEEEEEETTGG
T ss_pred CCCCcEEEEEcCCHHHHHHHHHHHhhcCCeEEEEeccHHHHHHHHhcc------------------CCCEEEEeCCCCCc
Confidence 4456899999999999999999999999 9999999999999887543 45699999999999
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+|+++++.|+...+ .+|||++|+..+.....++++.|+++||.||++.++|...+..++.
T Consensus 73 ~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~L~~~i~~~~~ 132 (135)
T 3snk_A 73 LGKPGIVEARALWA--TVPLIAVSDELTSEQTRVLVRMNASDWLHKPLDGKELLNAVTFHDT 132 (135)
T ss_dssp GGSTTHHHHHGGGT--TCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHTC-
T ss_pred hHHHHHHHHHhhCC--CCcEEEEeCCCCHHHHHHHHHcCcHhhccCCCCHHHHHHHHHHHhc
Confidence 99999999998765 8999999999999999999999999999999999999877766543
No 19
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=99.89 E-value=4.2e-22 Score=148.15 Aligned_cols=117 Identities=22% Similarity=0.337 Sum_probs=106.0
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
..+||||||++..+..+..+|...||.|..+.++.++++.+... .||+||+|+.||+++|++
T Consensus 3 ~~~ilivdd~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~------------------~~dlvi~D~~l~~~~g~~ 64 (126)
T 1dbw_A 3 DYTVHIVDDEEPVRKSLAFMLTMNGFAVKMHQSAEAFLAFAPDV------------------RNGVLVTDLRMPDMSGVE 64 (126)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHTTCEEEEESCHHHHHHHGGGC------------------CSEEEEEECCSTTSCHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCCcEEEEeCCHHHHHHHHhcC------------------CCCEEEEECCCCCCCHHH
Confidence 47899999999999999999999999999999999999988544 356999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
++++|+...+ .+|||++|+..+.....++++.||++||.||++.++|...+..+.
T Consensus 65 ~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~ 119 (126)
T 1dbw_A 65 LLRNLGDLKI--NIPSIVITGHGDVPMAVEAMKAGAVDFIEKPFEDTVIIEAIERAS 119 (126)
T ss_dssp HHHHHHHTTC--CCCEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHhcCC--CCCEEEEECCCCHHHHHHHHHhCHHHheeCCCCHHHHHHHHHHHH
Confidence 9999998654 899999999999999999999999999999999999987766654
No 20
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=99.89 E-value=4.2e-22 Score=150.13 Aligned_cols=123 Identities=23% Similarity=0.400 Sum_probs=111.0
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
+.+++||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|
T Consensus 5 ~~~~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~~~~~a~~~l~~~~------------------~dlvi~d~~l~~~~g 66 (137)
T 3hdg_A 5 EVALKILIVEDDTDAREWLSTIISNHFPEVWSAGDGEEGERLFGLHA------------------PDVIITDIRMPKLGG 66 (137)
T ss_dssp --CCCEEEECSCHHHHHHHHHHHHTTCSCEEEESSHHHHHHHHHHHC------------------CSEEEECSSCSSSCH
T ss_pred ccccEEEEEeCCHHHHHHHHHHHHhcCcEEEEECCHHHHHHHHhccC------------------CCEEEEeCCCCCCCH
Confidence 45689999999999999999999999999999999999999996554 559999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTKI 155 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~~ 155 (241)
+++++.|+...+ .+|||++|+..+.+....+++.|+++||.||++.++|...+..+++.+.
T Consensus 67 ~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~~ 127 (137)
T 3hdg_A 67 LEMLDRIKAGGA--KPYVIVISAFSEMKYFIKAIELGVHLFLPKPIEPGRLMETLEDFRHIKL 127 (137)
T ss_dssp HHHHHHHHHTTC--CCEEEECCCCCCHHHHHHHHHHCCSEECCSSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC--CCcEEEEecCcChHHHHHHHhCCcceeEcCCCCHHHHHHHHHHHHHHHh
Confidence 999999998764 8999999999999999999999999999999999999988888776543
No 21
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=99.89 E-value=1e-22 Score=154.03 Aligned_cols=124 Identities=17% Similarity=0.282 Sum_probs=109.1
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
..+.+||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|
T Consensus 4 ~~~~~iLivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~l~~~~------------------~dlvi~d~~l~~~~g 65 (140)
T 3grc_A 4 APRPRILICEDDPDIARLLNLMLEKGGFDSDMVHSAAQALEQVARRP------------------YAAMTVDLNLPDQDG 65 (140)
T ss_dssp -CCSEEEEECSCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHSC------------------CSEEEECSCCSSSCH
T ss_pred CCCCCEEEEcCCHHHHHHHHHHHHHCCCeEEEECCHHHHHHHHHhCC------------------CCEEEEeCCCCCCCH
Confidence 35689999999999999999999999999999999999999996554 559999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHH-HHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRIS-RCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~-~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
+++++.|+.....+++|||++|+..+..... .+++.|+++||.||++.++|...+..++++.
T Consensus 66 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~l~~~ 128 (140)
T 3grc_A 66 VSLIRALRRDSRTRDLAIVVVSANAREGELEFNSQPLAVSTWLEKPIDENLLILSLHRAIDNM 128 (140)
T ss_dssp HHHHHHHHTSGGGTTCEEEEECTTHHHHHHHHCCTTTCCCEEECSSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcccCCCCEEEEecCCChHHHHHHhhhcCCCEEEeCCCCHHHHHHHHHHHHHhc
Confidence 9999999984334589999999987777766 8899999999999999999988877776554
No 22
>1p6q_A CHEY2; chemotaxis, signal transduction, response regulator, structural proteomics in europe, spine, structural genomics; NMR {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1p6u_A
Probab=99.89 E-value=3e-22 Score=149.22 Aligned_cols=120 Identities=22% Similarity=0.469 Sum_probs=107.2
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCC-EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSY-QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
.+++||||||++..+..+..+|...|| .|..+.++.+|++.+.... ||+||+|+.||+++|
T Consensus 5 ~~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~~~~~a~~~~~~~~------------------~dlvl~D~~l~~~~g 66 (129)
T 1p6q_A 5 EKIKVLIVDDQVTSRLLLGDALQQLGFKQITAAGDGEQGMKIMAQNP------------------HHLVISDFNMPKMDG 66 (129)
T ss_dssp SCCCEEEECSSHHHHHHHHHHHHTTTCSCEECCSSHHHHHHHHHTSC------------------CSEEEECSSSCSSCH
T ss_pred ccCeEEEEcCCHHHHHHHHHHHHHCCCcEEEecCCHHHHHHHHHcCC------------------CCEEEEeCCCCCCCH
Confidence 458999999999999999999998899 7889999999999986543 559999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
+++++.|++....+.+|||++|+..+......+++.|+++|+.||++.++|...+..++
T Consensus 67 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~ 125 (129)
T 1p6q_A 67 LGLLQAVRANPATKKAAFIILTAQGDRALVQKAAALGANNVLAKPFTIEKMKAAIEAVF 125 (129)
T ss_dssp HHHHHHHTTCTTSTTCEEEECCSCCCHHHHHHHHHHTCSCEECCCSSHHHHHHHHHHHH
T ss_pred HHHHHHHhcCccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHH
Confidence 99999999865446899999999999999999999999999999999999987776654
No 23
>3r0j_A Possible two component system response transcript positive regulator PHOP; beta-alpha fold, winged helix-turn-helix; 2.50A {Mycobacterium tuberculosis}
Probab=99.88 E-value=4.6e-22 Score=165.65 Aligned_cols=121 Identities=24% Similarity=0.414 Sum_probs=110.4
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
..+++||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|
T Consensus 21 ~~~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~------------------~dlvllD~~lp~~~g 82 (250)
T 3r0j_A 21 TPEARVLVVDDEANIVELLSVSLKFQGFEVYTATNGAQALDRARETR------------------PDAVILDVXMPGMDG 82 (250)
T ss_dssp CSSCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHC------------------CSEEEEESCCSSSCH
T ss_pred CCCceEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHhCC------------------CCEEEEeCCCCCCCH
Confidence 34689999999999999999999999999999999999999996544 559999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
+++++.|+...+ ++|||++|+..+......++++||++||.||++.++|...+..++++
T Consensus 83 ~~~~~~lr~~~~--~~~ii~lt~~~~~~~~~~~~~~Ga~~yl~Kp~~~~~L~~~i~~~~~~ 141 (250)
T 3r0j_A 83 FGVLRRLRADGI--DAPALFLTARDSLQDKIAGLTLGGDDYVTKPFSLEEVVARLRVILRR 141 (250)
T ss_dssp HHHHHHHHHTTC--CCCEEEEECSTTHHHHHHHHTSTTCEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC--CCCEEEEECCCCHHHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHHh
Confidence 999999998754 89999999999999999999999999999999999998877777654
No 24
>3heb_A Response regulator receiver domain protein (CHEY); NYSGXRC, PSI-II, respose regulator, structure initiative, structural genomics; 2.40A {Rhodospirillum rubrum} SCOP: c.23.1.0
Probab=99.88 E-value=8.2e-22 Score=151.37 Aligned_cols=129 Identities=27% Similarity=0.487 Sum_probs=110.3
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCC--EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSY--QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
.++||||||++..+..+..+|...|+ .|..+.++.+|++.+......+ ......||+||+|+.||+++|
T Consensus 4 ~~~ILivddd~~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~---------~~~~~~~dliilD~~l~~~~g 74 (152)
T 3heb_A 4 SVTIVMIEDDLGHARLIEKNIRRAGVNNEIIAFTDGTSALNYLFGDDKSG---------RVSAGRAQLVLLDLNLPDMTG 74 (152)
T ss_dssp -CEEEEECCCHHHHHHHHHHHHHTTCCCCEEEESSHHHHHHHHHCTTSSS---------GGGTTCBEEEEECSBCSSSBH
T ss_pred CceEEEEeCCHHHHHHHHHHHHhCCCcceEEEeCCHHHHHHHHhcccccc---------ccccCCCCEEEEeCCCCCCcH
Confidence 48999999999999999999999998 8999999999999985321100 001345889999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+++++.|+.....+.+|||++|+..+......+++.|+++||.||++.++|...+..+..
T Consensus 75 ~~~~~~lr~~~~~~~~pii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 134 (152)
T 3heb_A 75 IDILKLVKENPHTRRSPVVILTTTDDQREIQRCYDLGANVYITKPVNYENFANAIRQLGL 134 (152)
T ss_dssp HHHHHHHHHSTTTTTSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcccccCCCEEEEecCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHH
Confidence 999999998554568999999999999999999999999999999999999888777644
No 25
>1mb3_A Cell division response regulator DIVK; signal transduction protein, structural proteomics in europe, spine, structural genomics; 1.41A {Caulobacter vibrioides} SCOP: c.23.1.1 PDB: 1m5u_A 1mav_A 1mb0_A 1m5t_A
Probab=99.88 E-value=6.5e-22 Score=146.26 Aligned_cols=118 Identities=26% Similarity=0.440 Sum_probs=100.3
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
.+||||||++..+..+..+|+..||.+..+.++.+|+..+.... ||+||+|+.||+++|+++
T Consensus 2 ~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~~~~~a~~~~~~~~------------------~dlvi~D~~l~~~~g~~~ 63 (124)
T 1mb3_A 2 KKVLIVEDNELNMKLFHDLLEAQGYETLQTREGLSALSIARENK------------------PDLILMDIQLPEISGLEV 63 (124)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHHC------------------CSEEEEESBCSSSBHHHH
T ss_pred cEEEEEcCCHHHHHHHHHHHHHcCcEEEEeCCHHHHHHHHhcCC------------------CCEEEEeCCCCCCCHHHH
Confidence 47999999999999999999999999999999999999886544 559999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
++.|++....+.+|||++|+.........+++.|+++||.||++.++|...+..++
T Consensus 64 ~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~ 119 (124)
T 1mb3_A 64 TKWLKEDDDLAHIPVVAVTAFAMKGDEERIREGGCEAYISKPISVVHFLETIKRLL 119 (124)
T ss_dssp HHHHHHSTTTTTSCEEEEC------CHHHHHHHTCSEEECSSCCHHHHHHHHHHHH
T ss_pred HHHHHcCccccCCcEEEEECCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHHH
Confidence 99999865456899999999888888889999999999999999999977666554
No 26
>1srr_A SPO0F, sporulation response regulatory protein; aspartate pocket, two component system; 1.90A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 1pey_A 3q15_C 2ftk_E* 1fsp_A 1nat_A 1pux_A 2fsp_A 2jvj_A 2jvk_A 2jvi_A 1f51_E
Probab=99.88 E-value=1.1e-21 Score=145.34 Aligned_cols=116 Identities=28% Similarity=0.440 Sum_probs=105.3
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
.+||||||++..+..+..+|...||.|..+.++.+|+..+.... ||+||+|+.||+++|+++
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~~------------------~dlvl~D~~l~~~~g~~~ 65 (124)
T 1srr_A 4 EKILIVDDQSGIRILLNEVFNKEGYQTFQAANGLQALDIVTKER------------------PDLVLLDMKIPGMDGIEI 65 (124)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHHC------------------CSEEEEESCCTTCCHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHhccC------------------CCEEEEecCCCCCCHHHH
Confidence 58999999999999999999999999999999999999986544 459999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
++.|+...+ .+|||++|+..+......+++.|+++||.||++.++|...+..++
T Consensus 66 ~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~ 119 (124)
T 1srr_A 66 LKRMKVIDE--NIRVIIMTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYL 119 (124)
T ss_dssp HHHHHHHCT--TCEEEEEESSCCHHHHHHHHHHTCCCEEESSCCHHHHHHHHHHHS
T ss_pred HHHHHHhCC--CCCEEEEEccCchHHHHHHHhcChHhhccCCCCHHHHHHHHHHHh
Confidence 999998754 899999999999989999999999999999999999977666543
No 27
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=99.88 E-value=1.4e-21 Score=148.23 Aligned_cols=122 Identities=27% Similarity=0.405 Sum_probs=109.8
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
+++||||||++..+..+..+|...||.|..+.++.+|+..+... ...||+||+|+.||+++|++
T Consensus 3 ~~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~----------------~~~~dlvi~d~~l~~~~g~~ 66 (143)
T 3jte_A 3 LAKILVIDDESTILQNIKFLLEIDGNEVLTASSSTEGLRIFTEN----------------CNSIDVVITDMKMPKLSGMD 66 (143)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHT----------------TTTCCEEEEESCCSSSCHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHHhC----------------CCCCCEEEEeCCCCCCcHHH
Confidence 58999999999999999999999999999999999999998621 23466999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
+++.|+...+ .+|||++|+..+......+++.|+++||.||++.++|...+..+++.+
T Consensus 67 ~~~~l~~~~~--~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~~~ 124 (143)
T 3jte_A 67 ILREIKKITP--HMAVIILTGHGDLDNAILAMKEGAFEYLRKPVTAQDLSIAINNAINRK 124 (143)
T ss_dssp HHHHHHHHCT--TCEEEEEECTTCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCC--CCeEEEEECCCCHHHHHHHHHhCcceeEeCCCCHHHHHHHHHHHHHHH
Confidence 9999998754 899999999999999999999999999999999999988777776543
No 28
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=99.88 E-value=1.4e-22 Score=153.52 Aligned_cols=124 Identities=20% Similarity=0.307 Sum_probs=109.5
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhc-CCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-CCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKT-SSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-GMT 91 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~-~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-~~~ 91 (241)
.+.+||||||++..+..+..+|.. .||.|..+.++.+|++.+... ..||+||+|+.|| +++
T Consensus 3 ~~~~ilivdd~~~~~~~l~~~L~~~~~~~v~~~~~~~~a~~~l~~~-----------------~~~dlvi~D~~l~~~~~ 65 (140)
T 3lua_A 3 LDGTVLLIDYFEYEREKTKIIFDNIGEYDFIEVENLKKFYSIFKDL-----------------DSITLIIMDIAFPVEKE 65 (140)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHHHHCCCEEEEECSHHHHHTTTTTC-----------------CCCSEEEECSCSSSHHH
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhccCccEEEECCHHHHHHHHhcC-----------------CCCcEEEEeCCCCCCCc
Confidence 468999999999999999999999 899999999999999988540 3456999999999 999
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
|+++++.|+.....+.+|||++|+..+.....++++.|+++||.||++.++|...+..++++.
T Consensus 66 g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~~ 128 (140)
T 3lua_A 66 GLEVLSAIRNNSRTANTPVIIATKSDNPGYRHAALKFKVSDYILKPYPTKRLENSVRSVLKIC 128 (140)
T ss_dssp HHHHHHHHHHSGGGTTCCEEEEESCCCHHHHHHHHHSCCSEEEESSCCTTHHHHHHHHHHCC-
T ss_pred HHHHHHHHHhCcccCCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHHhc
Confidence 999999999833345899999999999999999999999999999999999988777766443
No 29
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=99.88 E-value=5.4e-22 Score=148.16 Aligned_cols=120 Identities=28% Similarity=0.470 Sum_probs=101.9
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
...+||||||++..+..+..+|...||.+..+.++.+|++.+.... ||+||+|+.||+++|+
T Consensus 6 ~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~------------------~dlvi~d~~l~~~~g~ 67 (130)
T 3eod_A 6 VGKQILIVEDEQVFRSLLDSWFSSLGATTVLAADGVDALELLGGFT------------------PDLMICDIAMPRMNGL 67 (130)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHTTCC------------------CSEEEECCC-----CH
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhCCceEEEeCCHHHHHHHHhcCC------------------CCEEEEecCCCCCCHH
Confidence 4589999999999999999999999999999999999999996544 5599999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCC-CHHHHHHhhHHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPV-RLSDLNKLKPHLMKT 153 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~-~~~~L~~~~~~l~~~ 153 (241)
++++.|+...+ .+|||++|+..+......+++.|+++||.||+ +.++|...+..++..
T Consensus 68 ~~~~~l~~~~~--~~~ii~~t~~~~~~~~~~~~~~g~~~~l~KP~~~~~~l~~~i~~~l~~ 126 (130)
T 3eod_A 68 KLLEHIRNRGD--QTPVLVISATENMADIAKALRLGVEDVLLKPVKDLNRLREMVFACLYP 126 (130)
T ss_dssp HHHHHHHHTTC--CCCEEEEECCCCHHHHHHHHHHCCSEEEESCC---CHHHHHHHHHHC-
T ss_pred HHHHHHHhcCC--CCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCcHHHHHHHHHHHhch
Confidence 99999998754 89999999999999999999999999999999 889998877776654
No 30
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=99.88 E-value=3e-22 Score=149.02 Aligned_cols=119 Identities=19% Similarity=0.253 Sum_probs=105.5
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
+.+||||||++..+..+..+|+..||.|..+.++.+|++.+.... ||+||+|+.||+++|++
T Consensus 3 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~------------------~dlii~D~~l~~~~g~~ 64 (127)
T 3i42_A 3 LQQALIVEDYQAAAETFKELLEMLGFQADYVMSGTDALHAMSTRG------------------YDAVFIDLNLPDTSGLA 64 (127)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHTTEEEEEESSHHHHHHHHHHSC------------------CSEEEEESBCSSSBHHH
T ss_pred cceEEEEcCCHHHHHHHHHHHHHcCCCEEEECCHHHHHHHHHhcC------------------CCEEEEeCCCCCCCHHH
Confidence 579999999999999999999999999999999999999996544 55999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+++.|+.....+.+|||++|+..+... ..++..|+++||.||++.++|...+.+...
T Consensus 65 ~~~~l~~~~~~~~~~ii~~s~~~~~~~-~~~~~~g~~~~l~KP~~~~~L~~~i~~~~~ 121 (127)
T 3i42_A 65 LVKQLRALPMEKTSKFVAVSGFAKNDL-GKEACELFDFYLEKPIDIASLEPILQSIEG 121 (127)
T ss_dssp HHHHHHHSCCSSCCEEEEEECC-CTTC-CHHHHHHCSEEEESSCCHHHHHHHHHHHC-
T ss_pred HHHHHHhhhccCCCCEEEEECCcchhH-HHHHHHhhHHheeCCCCHHHHHHHHHHhhc
Confidence 999999975456899999999888777 889999999999999999999877666543
No 31
>3cfy_A Putative LUXO repressor protein; structural genomics, unknown function, uncharacterized protein, signal receiver domain; 2.50A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.88 E-value=1.2e-21 Score=148.31 Aligned_cols=118 Identities=26% Similarity=0.425 Sum_probs=106.7
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
.+||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|+++
T Consensus 5 ~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~------------------~dlvllD~~l~~~~g~~l 66 (137)
T 3cfy_A 5 PRVLLVEDSTSLAILYKQYVKDEPYDIFHVETGRDAIQFIERSK------------------PQLIILDLKLPDMSGEDV 66 (137)
T ss_dssp CEEEEECSCTTHHHHHHHHTTTSSSEEEEESSHHHHHHHHHHHC------------------CSEEEECSBCSSSBHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhcCceEEEeCCHHHHHHHHHhcC------------------CCEEEEecCCCCCCHHHH
Confidence 48999999999999999999988999999999999999986544 459999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
++.|+...+ .+|||++|+..+......+++.|+++||.||++.++|...+..++.+
T Consensus 67 ~~~l~~~~~--~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~~ 122 (137)
T 3cfy_A 67 LDWINQNDI--PTSVIIATAHGSVDLAVNLIQKGAEDFLEKPINADRLKTSVALHLKR 122 (137)
T ss_dssp HHHHHHTTC--CCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC--CCCEEEEEecCcHHHHHHHHHCCccEEEeCCCCHHHHHHHHHHHHHH
Confidence 999998654 89999999999999999999999999999999999998777666543
No 32
>1k68_A Phytochrome response regulator RCPA; phosphorylated aspartate, CHEY homologue, homodimer, (beta/alpha)5, signaling protein; HET: PHD; 1.90A {Tolypothrix SP} SCOP: c.23.1.1
Probab=99.88 E-value=1.8e-21 Score=146.29 Aligned_cols=129 Identities=23% Similarity=0.362 Sum_probs=110.9
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCC--EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSY--QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
+.+||||||++..+..+...|...|+ .|..+.++.+|++.+...... .....||+||+|+.||+++|
T Consensus 2 ~~~ilivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~~-----------~~~~~~dlvi~d~~~~~~~g 70 (140)
T 1k68_A 2 HKKIFLVEDNKADIRLIQEALANSTVPHEVVTVRDGMEAMAYLRQEGEY-----------ANASRPDLILLXLNLPKKDG 70 (140)
T ss_dssp CCEEEEECCCHHHHHHHHHHHHTCSSCCEEEEECSHHHHHHHHTTCGGG-----------GSCCCCSEEEECSSCSSSCH
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEECCHHHHHHHHHccccc-----------ccCCCCcEEEEecCCCcccH
Confidence 57999999999999999999999998 899999999999999641100 00134679999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
+++++.|+.....+.+|||++|+..+......+++.|+++||.||++.++|...+..++..+
T Consensus 71 ~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~ 132 (140)
T 1k68_A 71 REVLAEIKSDPTLKRIPVVVLSTSINEDDIFHSYDLHVNCYITKSANLSQLFQIVKGIEEFW 132 (140)
T ss_dssp HHHHHHHHHSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcccccccEEEEecCCcHHHHHHHHHhchhheecCCCCHHHHHHHHHHHHHHH
Confidence 99999999875335899999999999999999999999999999999999988887776544
No 33
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=99.88 E-value=5.7e-22 Score=166.57 Aligned_cols=122 Identities=28% Similarity=0.439 Sum_probs=109.7
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
..++||||||++..+..+...|...||.|..+.++.+|++.+.... .||+||+|+.||+++|+
T Consensus 123 ~~~~ILivDD~~~~~~~l~~~L~~~~~~v~~a~~~~eal~~l~~~~-----------------~~dlvllD~~mP~~dG~ 185 (259)
T 3luf_A 123 QQIEVLVVDDSRTSRHRTMAQLRKQLLQVHEASHAREALATLEQHP-----------------AIRLVLVDYYMPEIDGI 185 (259)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHCT-----------------TEEEEEECSCCSSSCHH
T ss_pred CCCcEEEEeCCHHHHHHHHHHHHHcCcEEEEeCCHHHHHHHHhcCC-----------------CCCEEEEcCCCCCCCHH
Confidence 4689999999999999999999999999999999999999985421 36799999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+++++||+..+...+|||++|+..+.....+++++||++||.||++.++|...+.++++
T Consensus 186 ~l~~~lr~~~~~~~~~ii~~s~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~l~ 244 (259)
T 3luf_A 186 SLVRMLRERYSKQQLAIIGISVSDKRGLSARYLKQGANDFLNQPFEPEELQCRVSHNLE 244 (259)
T ss_dssp HHHHHHHHHCCTTTSEEEEEECSSSSSHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccCCCCCeEEEEEccCCHHHHHHHHhcChhheEcCCCCHHHHHHHHHHHHH
Confidence 99999998766567999999999999999999999999999999999999876666654
No 34
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=99.88 E-value=7.8e-22 Score=145.13 Aligned_cols=115 Identities=23% Similarity=0.412 Sum_probs=103.6
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCE-EEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQ-VTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~-v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
++||||||++..+..+...|+..||. +..+.++.+|++.+.... ||+||+|+.||+++|++
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~~g~~vv~~~~~~~~a~~~~~~~~------------------~dlil~D~~l~~~~g~~ 64 (120)
T 1tmy_A 3 KRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELK------------------PDIVTMDITMPEMNGID 64 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC------------------CSEEEEECSCGGGCHHH
T ss_pred ceEEEEcCcHHHHHHHHHHHhhcCcEEEEEECCHHHHHHHHHhcC------------------CCEEEEeCCCCCCcHHH
Confidence 68999999999999999999999999 458999999999986544 45999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHL 150 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l 150 (241)
+++.|++..+ .+|||++|+..+......+++.|+++|+.||++.++|...+..+
T Consensus 65 ~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 118 (120)
T 1tmy_A 65 AIKEIMKIDP--NAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKV 118 (120)
T ss_dssp HHHHHHHHCT--TCCEEEEECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHhhCC--CCeEEEEeCCCCHHHHHHHHHhCcceeEeCCCCHHHHHHHHHHH
Confidence 9999998754 89999999999999999999999999999999999997766554
No 35
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=99.88 E-value=7.3e-22 Score=147.87 Aligned_cols=120 Identities=25% Similarity=0.388 Sum_probs=103.8
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
+++||||||++..+..+..+|. .||.|..+.++.+|++.+.... ||+||+|+.||+++|++
T Consensus 4 ~~~ilivdd~~~~~~~l~~~l~-~~~~v~~~~~~~~a~~~l~~~~------------------~dlvi~d~~l~~~~g~~ 64 (133)
T 3nhm_A 4 KPKVLIVENSWTMRETLRLLLS-GEFDCTTAADGASGLQQALAHP------------------PDVLISDVNMDGMDGYA 64 (133)
T ss_dssp -CEEEEECSCHHHHHHHHHHHT-TTSEEEEESSHHHHHHHHHHSC------------------CSEEEECSSCSSSCHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHHh-CCcEEEEECCHHHHHHHHhcCC------------------CCEEEEeCCCCCCCHHH
Confidence 5899999999999999999999 8999999999999999996544 55999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
+++.|+.....+.+|||++|+..+... ..++..|+++||.||++.++|...+..++...
T Consensus 65 ~~~~l~~~~~~~~~pii~~s~~~~~~~-~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~~ 123 (133)
T 3nhm_A 65 LCGHFRSEPTLKHIPVIFVSGYAPRTE-GPADQPVPDAYLVKPVKPPVLIAQLHALLARA 123 (133)
T ss_dssp HHHHHHHSTTTTTCCEEEEESCCC------TTSCCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCccCCCCEEEEeCCCcHhH-HHHhhcCCceEEeccCCHHHHHHHHHHHHhhh
Confidence 999999976556899999999887777 88999999999999999999988888777654
No 36
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=99.88 E-value=2.1e-21 Score=143.41 Aligned_cols=117 Identities=23% Similarity=0.472 Sum_probs=105.6
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
..+||||||++..+..+...|...||.|..+.++.++++.+.... ||+||+|+.||+++|++
T Consensus 3 ~~~ilivdd~~~~~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~~------------------~dlvi~D~~l~~~~g~~ 64 (123)
T 1xhf_A 3 TPHILIVEDELVTRNTLKSIFEAEGYDVFEATDGAEMHQILSEYD------------------INLVIMDINLPGKNGLL 64 (123)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHSC------------------CSEEEECSSCSSSCHHH
T ss_pred CceEEEEeCCHHHHHHHHHHHhhCCcEEEEeCCHHHHHHHHhcCC------------------CCEEEEcCCCCCCCHHH
Confidence 468999999999999999999989999999999999999986544 55999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+++.|+.. + .+|||++|+..+......+++.|+++||.||++.++|...+..+++
T Consensus 65 ~~~~l~~~-~--~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 119 (123)
T 1xhf_A 65 LARELREQ-A--NVALMFLTGRDNEVDKILGLEIGADDYITKPFNPRELTIRARNLLS 119 (123)
T ss_dssp HHHHHHHH-C--CCEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhC-C--CCcEEEEECCCChHHHHHHHhcCcceEEeCCCCHHHHHHHHHHHHH
Confidence 99999986 3 7899999999988889999999999999999999999877766554
No 37
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=99.88 E-value=1.1e-21 Score=150.37 Aligned_cols=121 Identities=23% Similarity=0.384 Sum_probs=107.8
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCC--CEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSS--YQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g--~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
...+++||||||++..+..+..+|...| +.|..+.++.+|++.+.... ||+||+|+.||+
T Consensus 17 ~~~m~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~------------------~dlii~D~~l~~ 78 (150)
T 4e7p_A 17 RGSHMKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKES------------------VDIAILDVEMPV 78 (150)
T ss_dssp ---CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSC------------------CSEEEECSSCSS
T ss_pred CCCccEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccC------------------CCEEEEeCCCCC
Confidence 4457899999999999999999999877 78889999999999996544 559999999999
Q ss_pred CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 90 MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 90 ~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
++|+++++.|+...+ .+|||++|+..+......+++.|+++||.||++.++|...+..++.
T Consensus 79 ~~g~~~~~~l~~~~~--~~~ii~ls~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~ 139 (150)
T 4e7p_A 79 KTGLEVLEWIRSEKL--ETKVVVVTTFKRAGYFERAVKAGVDAYVLKERSIADLMQTLHTVLE 139 (150)
T ss_dssp SCHHHHHHHHHHTTC--SCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHHHHHT
T ss_pred CcHHHHHHHHHHhCC--CCeEEEEeCCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHHc
Confidence 999999999998754 8999999999999999999999999999999999999887777654
No 38
>1k66_A Phytochrome response regulator RCPB; CHEY homologue, homodimer, APO-protein, (beta/alpha)5, signaling protein; 1.75A {Tolypothrix SP} SCOP: c.23.1.1
Probab=99.88 E-value=1.2e-21 Score=149.06 Aligned_cols=133 Identities=26% Similarity=0.439 Sum_probs=113.3
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCCC--EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCccc--ccccEEEEeCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSSY--QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQE--VGVNLVITDYCM 87 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~--~~~dlIilD~~m 87 (241)
....++||||||++..+..+..+|...|| .|..+.++.+|++.+.....++. .. ..||+||+|+.|
T Consensus 3 ~~~~~~iLivdd~~~~~~~l~~~L~~~g~~~~v~~~~~~~~al~~l~~~~~~~~----------~~~~~~~dlvi~D~~l 72 (149)
T 1k66_A 3 GNATQPLLVVEDSDEDFSTFQRLLQREGVVNPIYRCITGDQALDFLYQTGSYCN----------PDIAPRPAVILLDLNL 72 (149)
T ss_dssp SCTTSCEEEECCCHHHHHHHHHHHHHTTBCSCEEEECSHHHHHHHHHTCCSSSC----------GGGCCCCSEEEECSCC
T ss_pred CCCCccEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHHhcccccC----------cccCCCCcEEEEECCC
Confidence 34578999999999999999999999998 89999999999999975221100 01 357799999999
Q ss_pred CCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 88 PGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 88 p~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
|+++|+++++.|+.....+.+|||++|+..+......+++.|+++||.||++.++|...+..+++.+
T Consensus 73 ~~~~g~~~~~~l~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~ 139 (149)
T 1k66_A 73 PGTDGREVLQEIKQDEVLKKIPVVIMTTSSNPKDIEICYSYSISSYIVKPLEIDRLTETVQTFIKYW 139 (149)
T ss_dssp SSSCHHHHHHHHTTSTTGGGSCEEEEESCCCHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHhCcccCCCeEEEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHHHh
Confidence 9999999999999875335899999999999999999999999999999999999988887776544
No 39
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=99.88 E-value=2.7e-21 Score=142.62 Aligned_cols=116 Identities=21% Similarity=0.396 Sum_probs=104.7
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
.+||||||++..+..+...|...||.|..+.++.+++..+.... ||+||+|+.||+++|+++
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~~~------------------~dlvi~d~~l~~~~g~~~ 64 (122)
T 1zgz_A 3 HHIVIVEDEPVTQARLQSYFTQEGYTVSVTASGAGLREIMQNQS------------------VDLILLDINLPDENGLML 64 (122)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSC------------------CSEEEEESCCSSSCHHHH
T ss_pred cEEEEEECCHHHHHHHHHHHHHCCCeEEEecCHHHHHHHHhcCC------------------CCEEEEeCCCCCCChHHH
Confidence 58999999999999999999999999999999999999886544 559999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
++.+++ . +.+|||++|+..+......+++.|+++|+.||++.++|...+..+++
T Consensus 65 ~~~l~~-~--~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~~ 118 (122)
T 1zgz_A 65 TRALRE-R--STVGIILVTGRSDRIDRIVGLEMGADDYVTKPLELRELVVRVKNLLW 118 (122)
T ss_dssp HHHHHT-T--CCCEEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHh-c--CCCCEEEEECCCChhhHHHHHHhCHHHHccCCCCHHHHHHHHHHHHH
Confidence 999998 3 37999999999999889999999999999999999999877766553
No 40
>2qzj_A Two-component response regulator; 11017X, PSI-II, structural genomics; 2.89A {Clostridium difficile}
Probab=99.88 E-value=1e-21 Score=148.46 Aligned_cols=118 Identities=19% Similarity=0.333 Sum_probs=106.6
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
.++||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|++
T Consensus 4 ~~~Ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~------------------~dlvllD~~l~~~~g~~ 65 (136)
T 2qzj_A 4 QTKILIIDGDKDNCQKLKGFLEEKGISIDLAYNCEEAIGKIFSNK------------------YDLIFLEIILSDGDGWT 65 (136)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHCC------------------CSEEEEESEETTEEHHH
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHhcC------------------CCEEEEeCCCCCCCHHH
Confidence 579999999999999999999988999999999999999986544 45999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
+++.|+... .+|||++|+..+......+++.|+++||.||++.++|...+..++.+
T Consensus 66 l~~~l~~~~---~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~~~ 121 (136)
T 2qzj_A 66 LCKKIRNVT---TCPIVYMTYINEDQSILNALNSGGDDYLIKPLNLEILYAKVKAILRR 121 (136)
T ss_dssp HHHHHHTTC---CCCEEEEESCCCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHccCC---CCCEEEEEcCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHHH
Confidence 999999753 78999999999999999999999999999999999998777666543
No 41
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=99.88 E-value=1.6e-21 Score=145.79 Aligned_cols=122 Identities=23% Similarity=0.386 Sum_probs=102.5
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
....+||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|
T Consensus 4 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~------------------~dlii~d~~l~~~~g 65 (132)
T 3lte_A 4 KQSKRILVVDDDQAMAAAIERVLKRDHWQVEIAHNGFDAGIKLSTFE------------------PAIMTLDLSMPKLDG 65 (132)
T ss_dssp ---CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHTC------------------CSEEEEESCBTTBCH
T ss_pred CCCccEEEEECCHHHHHHHHHHHHHCCcEEEEeCCHHHHHHHHHhcC------------------CCEEEEecCCCCCCH
Confidence 45689999999999999999999999999999999999999996554 459999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
+++++.|+.....+.++||++++.... ....+++.|+++||.||++.++|...+......
T Consensus 66 ~~~~~~l~~~~~~~~~~ii~~~~~~~~-~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 125 (132)
T 3lte_A 66 LDVIRSLRQNKVANQPKILVVSGLDKA-KLQQAVTEGADDYLEKPFDNDALLDRIHDLVNE 125 (132)
T ss_dssp HHHHHHHHTTTCSSCCEEEEECCSCSH-HHHHHHHHTCCEEECSSCCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHhcCccCCCeEEEEeCCChH-HHHHHHHhChHHHhhCCCCHHHHHHHHHHHcCC
Confidence 999999998764345666666665554 788999999999999999999998777665543
No 42
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=99.88 E-value=1.2e-21 Score=147.38 Aligned_cols=124 Identities=26% Similarity=0.412 Sum_probs=108.9
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
..+.+||||||++..+..+..+|...||.|..+.++.+++..+.... .||+||+|+.||+++|
T Consensus 5 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~-----------------~~dlvi~D~~l~~~~g 67 (136)
T 3hdv_A 5 AARPLVLVVDDNAVNREALILYLKSRGIDAVGADGAEEARLYLHYQK-----------------RIGLMITDLRMQPESG 67 (136)
T ss_dssp --CCEEEEECSCHHHHHHHHHHHHHTTCCEEEESSHHHHHHHHHHCT-----------------TEEEEEECSCCSSSCH
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHHcCceEEEeCCHHHHHHHHHhCC-----------------CCcEEEEeccCCCCCH
Confidence 34689999999999999999999999999999999999999885432 2679999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
+++++.|+... .+.+|||++|+..+.....++++.|+++||.||++.++|...+..+..+.
T Consensus 68 ~~~~~~l~~~~-~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~~ 128 (136)
T 3hdv_A 68 LDLIRTIRASE-RAALSIIVVSGDTDVEEAVDVMHLGVVDFLLKPVDLGKLLELVNKELKIG 128 (136)
T ss_dssp HHHHHHHHTST-TTTCEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHhcC-CCCCCEEEEeCCCChHHHHHHHhCCcceEEeCCCCHHHHHHHHHHHhcCc
Confidence 99999999873 35899999999999999999999999999999999999988777766543
No 43
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=99.88 E-value=1.1e-21 Score=147.45 Aligned_cols=119 Identities=22% Similarity=0.381 Sum_probs=105.0
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCC--CEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSS--YQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g--~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
+++||||||++..+..+..+|+..| +.|..+.++.+|++.+.... ||+||+|+.||+++|
T Consensus 3 ~~~Ilivdd~~~~~~~l~~~l~~~~~~~~v~~~~~~~~al~~~~~~~------------------~dlvilD~~lp~~~g 64 (133)
T 3b2n_A 3 LTSLIIAEDQNMLRQAMVQLIKLHGDFEILADTDNGLDAMKLIEEYN------------------PNVVILDIEMPGMTG 64 (133)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHHSSEEEEEEESCHHHHHHHHHHHC------------------CSEEEECSSCSSSCH
T ss_pred ceEEEEECCCHHHHHHHHHHHhhCCCcEEEEEcCCHHHHHHHHhhcC------------------CCEEEEecCCCCCCH
Confidence 4789999999999999999998776 55678999999999986544 459999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
+++++.|+...+ .+|||++|+..+.....++++.|+++||.||++.++|...+..++.+
T Consensus 65 ~~~~~~l~~~~~--~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~~ 123 (133)
T 3b2n_A 65 LEVLAEIRKKHL--NIKVIIVTTFKRPGYFEKAVVNDVDAYVLKERSIEELVETINKVNNG 123 (133)
T ss_dssp HHHHHHHHHTTC--SCEEEEEESCCCHHHHHHHHHTTCSEEEETTSCHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHCC--CCcEEEEecCCCHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHHHcC
Confidence 999999998643 89999999999999999999999999999999999998877766543
No 44
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=99.88 E-value=2e-21 Score=146.97 Aligned_cols=123 Identities=24% Similarity=0.398 Sum_probs=108.5
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhc-CCCE-EEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKT-SSYQ-VTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~-~g~~-v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
..+++||||||++..+..+..+|.. .||. |..+.++.+|+..+.... ||+||+|+.||++
T Consensus 6 ~~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~------------------~dlii~d~~l~~~ 67 (143)
T 3cnb_A 6 KNDFSILIIEDDKEFADMLTQFLENLFPYAKIKIAYNPFDAGDLLHTVK------------------PDVVMLDLMMVGM 67 (143)
T ss_dssp ---CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEECSHHHHHHHHHHTC------------------CSEEEEETTCTTS
T ss_pred cCCceEEEEECCHHHHHHHHHHHHhccCccEEEEECCHHHHHHHHHhcC------------------CCEEEEecccCCC
Confidence 4568999999999999999999998 8999 889999999999996544 5599999999999
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
+|+++++.|+.....+.+|||++|+..+......+++.|+++||.||++.++|...+..++++
T Consensus 68 ~g~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~ 130 (143)
T 3cnb_A 68 DGFSICHRIKSTPATANIIVIAMTGALTDDNVSRIVALGAETCFGKPLNFTLLEKTIKQLVEQ 130 (143)
T ss_dssp CHHHHHHHHHTSTTTTTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHhCccccCCcEEEEeCCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHHHHHh
Confidence 999999999985444589999999999999999999999999999999999998877776643
No 45
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=99.87 E-value=1.9e-21 Score=142.70 Aligned_cols=115 Identities=24% Similarity=0.422 Sum_probs=104.0
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
.+||||||++..+..+...|...||.|..+.++.+++..+.... ||+||+|+.||+++|+++
T Consensus 2 ~~ilivdd~~~~~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~~------------------~dlvl~D~~l~~~~g~~~ 63 (120)
T 2a9o_A 2 KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQ------------------PDIIILDLMLPEIDGLEV 63 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHC------------------CSEEEECSSCSSSCHHHH
T ss_pred ceEEEEcCCHHHHHHHHHHHHhcCcEEEEecCHHHHHHHHHhCC------------------CCEEEEeccCCCCCHHHH
Confidence 58999999999999999999999999999999999999986544 559999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
++.|++. +.+|||++|+..+......+++.|+++||.||++.++|...+..++
T Consensus 64 ~~~l~~~---~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~ 116 (120)
T 2a9o_A 64 AKTIRKT---SSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALL 116 (120)
T ss_dssp HHHHHHH---CCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHhC---CCCCEEEEecCCchHHHHHHHhCCHhheEeCCCCHHHHHHHHHHHH
Confidence 9999974 3799999999998888899999999999999999999987766554
No 46
>2zay_A Response regulator receiver protein; structural genomics, NYSGXRC, target 11006U, protein structure initiative; 2.00A {Desulfuromonas acetoxidans}
Probab=99.87 E-value=1.3e-21 Score=149.11 Aligned_cols=124 Identities=20% Similarity=0.326 Sum_probs=109.9
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
...++||||||++..+..+...|...||.|..+.++.+|+..+.... ||+||+|+.||+++|
T Consensus 6 ~~~~~iLivd~~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~------------------~dlii~d~~l~~~~g 67 (147)
T 2zay_A 6 GKWWRIMLVDTQLPALAASISALSQEGFDIIQCGNAIEAVPVAVKTH------------------PHLIITEANMPKISG 67 (147)
T ss_dssp --CEEEEEECTTGGGGHHHHHHHHHHTEEEEEESSHHHHHHHHHHHC------------------CSEEEEESCCSSSCH
T ss_pred CCCceEEEEeCCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHHcCC------------------CCEEEEcCCCCCCCH
Confidence 34689999999999999999999999999999999999999996544 559999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
+++++.|+.....+.+|||++|+..+......+++.|+++||.||++.++|...+..++...
T Consensus 68 ~~~~~~l~~~~~~~~~pii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~~~~~~~ 129 (147)
T 2zay_A 68 MDLFNSLKKNPQTASIPVIALSGRATAKEEAQLLDMGFIDFIAKPVNAIRLSARIKRVLKLL 129 (147)
T ss_dssp HHHHHHHHTSTTTTTSCEEEEESSCCHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCcccCCCCEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999999843345899999999999999999999999999999999999988777766543
No 47
>3kcn_A Adenylate cyclase homolog; SGX, PSI 2, structural genomics, protein structure initiative; 2.45A {Rhodopirellula baltica}
Probab=99.87 E-value=5.6e-21 Score=146.63 Aligned_cols=121 Identities=24% Similarity=0.370 Sum_probs=108.8
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
+.+||||||++..+..+..+|+. ||.|..+.++.+|++.+.... +||+||+|+.||+++|++
T Consensus 4 ~~~ILivdd~~~~~~~l~~~L~~-~~~v~~~~~~~~a~~~l~~~~-----------------~~dlvi~D~~l~~~~g~~ 65 (151)
T 3kcn_A 4 NERILLVDDDYSLLNTLKRNLSF-DFEVTTCESGPEALACIKKSD-----------------PFSVIMVDMRMPGMEGTE 65 (151)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTT-TSEEEEESSHHHHHHHHHHSC-----------------CCSEEEEESCCSSSCHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHhcc-CceEEEeCCHHHHHHHHHcCC-----------------CCCEEEEeCCCCCCcHHH
Confidence 58999999999999999999975 999999999999999996443 246999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhc-ccccccCCCCHHHHHHhhHHHHHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEG-AEEFFLKPVRLSDLNKLKPHLMKTKI 155 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~G-a~~~l~KP~~~~~L~~~~~~l~~~~~ 155 (241)
+++.|+...+ .+|||++|+..+......++..| +++||.||++.++|...+..+++.+.
T Consensus 66 ~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~~~i~~~l~~~~ 125 (151)
T 3kcn_A 66 VIQKARLISP--NSVYLMLTGNQDLTTAMEAVNEGQVFRFLNKPCQMSDIKAAINAGIKQYD 125 (151)
T ss_dssp HHHHHHHHCS--SCEEEEEECGGGHHHHHHHHHHTCCSEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC--CcEEEEEECCCCHHHHHHHHHcCCeeEEEcCCCCHHHHHHHHHHHHHHHH
Confidence 9999998764 89999999999999999999999 99999999999999888877776544
No 48
>3ilh_A Two component response regulator; NYSGXRC, PSI-II, protein S initiative, structural genomics; 2.59A {Cytophaga hutchinsonii}
Probab=99.87 E-value=3.7e-21 Score=145.98 Aligned_cols=127 Identities=21% Similarity=0.300 Sum_probs=109.6
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCC--EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSY--QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
..+++||||||++..+..+..+|...|+ .|..+.++.+|++.+..... ....||+||+|+.||++
T Consensus 7 ~~~~~iLivdd~~~~~~~l~~~l~~~~~~~~v~~~~~~~~a~~~l~~~~~-------------~~~~~dlvi~D~~l~~~ 73 (146)
T 3ilh_A 7 RKIDSVLLIDDDDIVNFLNTTIIRMTHRVEEIQSVTSGNAAINKLNELYA-------------AGRWPSIICIDINMPGI 73 (146)
T ss_dssp CCEEEEEEECSCHHHHHHHHHHHHTTCCEEEEEEESSHHHHHHHHHHHHT-------------SSCCCSEEEEESSCSSS
T ss_pred CccceEEEEeCCHHHHHHHHHHHHhcCCCeeeeecCCHHHHHHHHHHhhc-------------cCCCCCEEEEcCCCCCC
Confidence 4568999999999999999999999998 88899999999999965110 01346699999999999
Q ss_pred CHHHHHHHHHhcC--CCCCCcEEEEccCCChHHHHHHHHhc-ccccccCCCCHHHHHHhhHHHHH
Q 026239 91 TGYDLLKKIKESS--SLRDIPVVIMSSENVPSRISRCLEEG-AEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 91 ~g~~ll~~ir~~~--~~~~ipvIils~~~~~~~~~~~l~~G-a~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+|+++++.|+... ..+.+|||++|+..+......++..| +++||.||++.++|...+.+...
T Consensus 74 ~g~~~~~~l~~~~~~~~~~~~ii~~t~~~~~~~~~~~~~~g~~~~~l~KP~~~~~L~~~i~~~~~ 138 (146)
T 3ilh_A 74 NGWELIDLFKQHFQPMKNKSIVCLLSSSLDPRDQAKAEASDWVDYYVSKPLTANALNNLYNKVLN 138 (146)
T ss_dssp CHHHHHHHHHHHCGGGTTTCEEEEECSSCCHHHHHHHHHCSSCCEEECSSCCHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhhhhccCCCeEEEEeCCCChHHHHHHHhcCCcceeeeCCCCHHHHHHHHHHHHH
Confidence 9999999999842 23489999999999999999999999 99999999999999887766653
No 49
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=99.87 E-value=8e-22 Score=149.52 Aligned_cols=121 Identities=20% Similarity=0.274 Sum_probs=106.6
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC-CCH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG-MTG 92 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~-~~g 92 (241)
...+||||||++..+..+..+|...||.|..+.++.+|++.+.. ...||+||+|+.||+ ++|
T Consensus 4 ~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~-----------------~~~~dlvi~D~~l~~~~~g 66 (140)
T 3h5i_A 4 KDKKILIVEDSKFQAKTIANILNKYGYTVEIALTGEAAVEKVSG-----------------GWYPDLILMDIELGEGMDG 66 (140)
T ss_dssp --CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHT-----------------TCCCSEEEEESSCSSSCCH
T ss_pred CCcEEEEEeCCHHHHHHHHHHHHHcCCEEEEecChHHHHHHHhc-----------------CCCCCEEEEeccCCCCCCH
Confidence 45899999999999999999999999999999999999999864 124569999999995 999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
+++++.|+.. +.+|||++|+..+......+++.|+++||.||++.++|...+..+++.+
T Consensus 67 ~~~~~~l~~~---~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~l~~~ 125 (140)
T 3h5i_A 67 VQTALAIQQI---SELPVVFLTAHTEPAVVEKIRSVTAYGYVMKSATEQVLITIVEMALRLY 125 (140)
T ss_dssp HHHHHHHHHH---CCCCEEEEESSSSCCCCGGGGGSCEEEEEETTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC---CCCCEEEEECCCCHHHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHHHHH
Confidence 9999999985 3899999999988888888999999999999999999988887776544
No 50
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=99.87 E-value=2e-21 Score=146.93 Aligned_cols=119 Identities=28% Similarity=0.458 Sum_probs=103.2
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
+++||||||++..+..+..+|+..||.|..+.++.+|++.+.... ||+||+|+.||+++|++
T Consensus 3 ~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~------------------~dlvi~D~~l~~~~g~~ 64 (138)
T 3c3m_A 3 LYTILVVDDSPMIVDVFVTMLERGGYRPITAFSGEECLEALNATP------------------PDLVLLDIMMEPMDGWE 64 (138)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSC------------------CSEEEEESCCSSSCHHH
T ss_pred cceEEEEeCCHHHHHHHHHHHHHcCceEEEeCCHHHHHHHHhccC------------------CCEEEEeCCCCCCCHHH
Confidence 479999999999999999999999999999999999999986544 55999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
+++.|+.....+.+|||++|+.........++..|+++||.||++.++|...+..++
T Consensus 65 ~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~~~~~~l~KP~~~~~L~~~i~~~~ 121 (138)
T 3c3m_A 65 TLERIKTDPATRDIPVLMLTAKPLTPEEANEYGSYIEDYILKPTTHHQLYEAIEHVL 121 (138)
T ss_dssp HHHHHHHSTTTTTSCEEEEESSCCCHHHHHHTTTTCSEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHcCcccCCCCEEEEECCCChHHHHHHhhcCHhheEeCCCCHHHHHHHHHHHH
Confidence 999999865446899999999876655556666778999999999999987766654
No 51
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=99.87 E-value=1.3e-21 Score=158.66 Aligned_cols=133 Identities=22% Similarity=0.363 Sum_probs=104.6
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCC-EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSY-QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~-~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
...+||||||++..+..+..+|+..|| .|..+.++.+|++.+......... ........|||||+|+.||+++|
T Consensus 60 ~~~~ILiVdDd~~~~~~l~~~L~~~g~~~v~~a~~~~eal~~l~~~~~~~~~-----~~~~~~~~~dlillD~~lp~~~G 134 (206)
T 3mm4_A 60 RGKRVLVVDDNFISRKVATGKLKKMGVSEVEQCDSGKEALRLVTEGLTQREE-----QGSVDKLPFDYIFMDCQMPEMDG 134 (206)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHHHHH-----HTCSSCCSCSEEEEESCCSSSCH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCCeeeeeCCHHHHHHHHHhhcccccc-----cccccCCCCCEEEEcCCCCCCCH
Confidence 457999999999999999999999998 899999999999998643000000 00000124779999999999999
Q ss_pred HHHHHHHHhcCC--CCCCcEEEEccCC-ChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 93 YDLLKKIKESSS--LRDIPVVIMSSEN-VPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 93 ~~ll~~ir~~~~--~~~ipvIils~~~-~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
+++++.|+.... .+++|||++|+.. +.....++++.|+++||.||++ +|...+..++..
T Consensus 135 ~el~~~lr~~~~~~~~~~piI~ls~~~~~~~~~~~~~~~Ga~~~l~KP~~--~L~~~i~~~l~~ 196 (206)
T 3mm4_A 135 YEATREIRKVEKSYGVRTPIIAVSGHDPGSEEARETIQAGMDAFLDKSLN--QLANVIREIESK 196 (206)
T ss_dssp HHHHHHHHHHHHTTTCCCCEEEEESSCCCHHHHHHHHHHTCSEEEETTCT--THHHHHHHHC--
T ss_pred HHHHHHHHhhhhhcCCCCcEEEEECCCCcHHHHHHHHhCCCCEEEcCcHH--HHHHHHHHHHhh
Confidence 999999997521 1489999999987 7788889999999999999998 776666666544
No 52
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=99.87 E-value=5.8e-22 Score=148.61 Aligned_cols=118 Identities=19% Similarity=0.324 Sum_probs=104.4
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
+++||||||++..+..+..+|+..||.+. .+.++.+|++.+.... ||+||+|+.||+++|+
T Consensus 1 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~------------------~dlii~d~~l~~~~g~ 62 (134)
T 3f6c_A 1 SLNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLK------------------PDIVIIDVDIPGVNGI 62 (134)
T ss_dssp CEEEEEECCCHHHHHHHHHHHHHTTEEEEEEESSSTTHHHHHHHHC------------------CSEEEEETTCSSSCHH
T ss_pred CeEEEEEcCCHHHHHHHHHHHhhCCcEEEEEcCCHHHHHHHHHhcC------------------CCEEEEecCCCCCChH
Confidence 37999999999999999999999999988 8999999999996554 5599999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
++++.|+...+ .+|||++|+..+......+++.|+++||.||++.++|...+..++.
T Consensus 63 ~~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 119 (134)
T 3f6c_A 63 QVLETLRKRQY--SGIIIIVSAKNDHFYGKHCADAGANGFVSKKEGMNNIIAAIEAAKN 119 (134)
T ss_dssp HHHHHHHHTTC--CSEEEEEECC---CTHHHHHHTTCSEEEEGGGCTHHHHHHHHHHHT
T ss_pred HHHHHHHhcCC--CCeEEEEeCCCChHHHHHHHHhCCCEEEeCCCCHHHHHHHHHHHHC
Confidence 99999998764 8999999999988889999999999999999999999887776653
No 53
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=99.87 E-value=7.2e-21 Score=146.51 Aligned_cols=121 Identities=25% Similarity=0.395 Sum_probs=108.8
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
.++||||||++..+..+..+|...||.|..+.++.+|+..+... .||+||+|+.||+++|++
T Consensus 3 ~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~------------------~~dliild~~l~~~~g~~ 64 (155)
T 1qkk_A 3 APSVFLIDDDRDLRKAMQQTLELAGFTVSSFASATEALAGLSAD------------------FAGIVISDIRMPGMDGLA 64 (155)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHTCCTT------------------CCSEEEEESCCSSSCHHH
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCcEEEEECCHHHHHHHHHhC------------------CCCEEEEeCCCCCCCHHH
Confidence 57999999999999999999999999999999999999988543 356999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTKI 155 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~~ 155 (241)
+++.|+...+ .+|||++|+..+......+++.|+++||.||++.++|...+..++..+.
T Consensus 65 ~~~~l~~~~~--~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~i~~~~~~~~ 123 (155)
T 1qkk_A 65 LFRKILALDP--DLPMILVTGHGDIPMAVQAIQDGAYDFIAKPFAADRLVQSARRAEEKRR 123 (155)
T ss_dssp HHHHHHHHCT--TSCEEEEECGGGHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCC--CCCEEEEECCCChHHHHHHHhcCCCeEEeCCCCHHHHHHHHHHHHHHHH
Confidence 9999998754 8999999999888899999999999999999999999887777765543
No 54
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=99.87 E-value=2.7e-22 Score=171.09 Aligned_cols=117 Identities=21% Similarity=0.264 Sum_probs=104.5
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-CCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-GMT 91 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-~~~ 91 (241)
...+||+|||++..+..+..+|+..||.|. .+.+|.+|++.+.... |||||+|+.|| +||
T Consensus 159 l~~rILvVdD~~~~~~~l~~~L~~~g~~v~~~a~~g~eAl~~~~~~~------------------~dlvl~D~~MPd~md 220 (286)
T 3n0r_A 159 LATEVLIIEDEPVIAADIEALVRELGHDVTDIAATRGEALEAVTRRT------------------PGLVLADIQLADGSS 220 (286)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHCC------------------CSEEEEESCCTTSCC
T ss_pred CCCcEEEEcCCHHHHHHHHHHhhccCceEEEEeCCHHHHHHHHHhCC------------------CCEEEEcCCCCCCCC
Confidence 346899999999999999999999999999 9999999999997554 55999999999 899
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
|+++++.||... ++|||++|+.. +...+++++|+++||.||++.++|...+..++..
T Consensus 221 G~e~~~~ir~~~---~~piI~lT~~~--~~~~~~~~~G~~~~l~KP~~~~~L~~~i~~~l~~ 277 (286)
T 3n0r_A 221 GIDAVKDILGRM---DVPVIFITAFP--ERLLTGERPEPTFLITKPFQPETVKAAIGQALFF 277 (286)
T ss_dssp TTTTTHHHHHHT---TCCEEEEESCG--GGGCCSSSCCCSSEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcC---CCCEEEEeCCH--HHHHHHHhCCCcEEEeCCCCHHHHHHHHHHHHHh
Confidence 999999999875 89999999975 3466789999999999999999998877776644
No 55
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=99.87 E-value=2.6e-21 Score=171.53 Aligned_cols=121 Identities=25% Similarity=0.490 Sum_probs=105.0
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
....+||||||++..+..+..+|+..||.|..+.++.+|++.+.... |||||+|+.||+++|
T Consensus 3 ~~~~~iLivdD~~~~~~~l~~~L~~~g~~v~~a~~~~~al~~~~~~~------------------~dlvllD~~mp~~~G 64 (394)
T 3eq2_A 3 KVSATLLIIDDDEVVRESLAAYLEDSNFKVLQALNGLQGLQIFESEQ------------------PDLVICDLRMPQIDG 64 (394)
T ss_dssp -CEEEEEEECSCHHHHHHHHHHHHHTTEEEEECSSHHHHHHHHHHSC------------------CSEEEECCCSSSSCT
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHhhCC------------------CCEEEEcCCCCCCCH
Confidence 34689999999999999999999999999999999999999996544 559999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCC-CHHHHHHhhHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPV-RLSDLNKLKPHLMKT 153 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~-~~~~L~~~~~~l~~~ 153 (241)
++++++||+..+ ++|||++|+..+.+.+.++++.||++||.||+ +.+.|...+..++..
T Consensus 65 ~~~~~~lr~~~~--~~pii~lt~~~~~~~~~~a~~~ga~~yl~KP~~~~~~l~~~i~~~~~~ 124 (394)
T 3eq2_A 65 LELIRRIRQTAS--ETPIIVLSGAGVMSDAVEALRLGAADYLIKPLEDLAVLEHSVRRALDR 124 (394)
T ss_dssp HHHHHHHHHTTC--CCCEEEC---CHHHHHHHHHHHTCSEECCSSCSCTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCC--CCcEEEEEcCCCHHHHHHHHhcChhhEEECCCChHHHHHHHHHHHHhh
Confidence 999999998754 89999999999999999999999999999999 678887766666544
No 56
>1yio_A Response regulatory protein; transcription regulation, DNA binding protein; 2.20A {Pseudomonas fluorescens} SCOP: a.4.6.2 c.23.1.1 PDB: 1zn2_A
Probab=99.87 E-value=2.7e-21 Score=156.15 Aligned_cols=120 Identities=27% Similarity=0.406 Sum_probs=108.3
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
..+||||||++..+..+..+|...||.|..+.++.+|++.+... .||+||+|+.||+++|++
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~------------------~~dlvl~D~~lp~~~g~~ 65 (208)
T 1yio_A 4 KPTVFVVDDDMSVREGLRNLLRSAGFEVETFDCASTFLEHRRPE------------------QHGCLVLDMRMPGMSGIE 65 (208)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHCCTT------------------SCEEEEEESCCSSSCHHH
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCCceEEEcCCHHHHHHhhhcc------------------CCCEEEEeCCCCCCCHHH
Confidence 47899999999999999999999999999999999999988543 466999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
+++.|+...+ ++|||++|+..+......+++.||++||.||++.++|...+..++...
T Consensus 66 ~~~~l~~~~~--~~~ii~ls~~~~~~~~~~a~~~Ga~~~l~Kp~~~~~L~~~i~~~~~~~ 123 (208)
T 1yio_A 66 LQEQLTAISD--GIPIVFITAHGDIPMTVRAMKAGAIEFLPKPFEEQALLDAIEQGLQLN 123 (208)
T ss_dssp HHHHHHHTTC--CCCEEEEESCTTSCCCHHHHHTTEEEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCC--CCCEEEEeCCCCHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHHHHhhh
Confidence 9999998754 899999999988888899999999999999999999988777776543
No 57
>1zh2_A KDP operon transcriptional regulatory protein KDPE; two-component system, gene regulation, transcription factor, KDP potassium transport system; 2.00A {Escherichia coli} SCOP: c.23.1.1 PDB: 1zh4_A
Probab=99.87 E-value=4.4e-21 Score=140.98 Aligned_cols=116 Identities=20% Similarity=0.391 Sum_probs=104.2
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
++||||||++..+..+...|...||.+..+.++.+++..+.... ||+||+|+.||+++|+++
T Consensus 2 ~~ilivdd~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~~------------------~dlvi~D~~l~~~~g~~~ 63 (121)
T 1zh2_A 2 TNVLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRK------------------PDLIILDLGLPDGDGIEF 63 (121)
T ss_dssp CEEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHHC------------------CSEEEEESEETTEEHHHH
T ss_pred cEEEEEeCCHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHHhcCC------------------CCEEEEeCCCCCCcHHHH
Confidence 68999999999999999999999999999999999999886443 559999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
++.++. . +.+|||++|+..+......+++.|+++||.||++.++|...+..+++
T Consensus 64 ~~~l~~-~--~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~ 117 (121)
T 1zh2_A 64 IRDLRQ-W--SAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALR 117 (121)
T ss_dssp HHHHHT-T--CCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHh-C--CCCcEEEEECCCCHHHHHHHHhcCCCeEEeCCcCHHHHHHHHHHHHH
Confidence 999995 2 37999999999999889999999999999999999999877766544
No 58
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=99.87 E-value=2.8e-21 Score=149.57 Aligned_cols=118 Identities=25% Similarity=0.427 Sum_probs=106.8
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
+++||||||++..+..+..+|+..||.+. .+.++.+|++.+....+ .|||||+|+.||+++|+
T Consensus 36 ~~~Ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~al~~l~~~~~----------------~~dliilD~~l~~~~g~ 99 (157)
T 3hzh_A 36 PFNVLIVDDSVFTVKQLTQIFTSEGFNIIDTAADGEEAVIKYKNHYP----------------NIDIVTLXITMPKMDGI 99 (157)
T ss_dssp ECEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGG----------------GCCEEEECSSCSSSCHH
T ss_pred ceEEEEEeCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCC----------------CCCEEEEeccCCCccHH
Confidence 57999999999999999999999999998 99999999999965411 35699999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHL 150 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l 150 (241)
++++.|+...+ .+|||++|+..+......+++.|+++||.||++.++|...+..+
T Consensus 100 ~~~~~lr~~~~--~~~ii~ls~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~ 154 (157)
T 3hzh_A 100 TCLSNIMEFDK--NARVIMISALGKEQLVKDCLIKGAKTFIVKPLDRAKVLQRVMSV 154 (157)
T ss_dssp HHHHHHHHHCT--TCCEEEEESCCCHHHHHHHHHTTCSEEEESSCCHHHHHHHHHHT
T ss_pred HHHHHHHhhCC--CCcEEEEeccCcHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHH
Confidence 99999998764 89999999999999999999999999999999999998766654
No 59
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=99.86 E-value=4.3e-21 Score=145.38 Aligned_cols=120 Identities=24% Similarity=0.386 Sum_probs=108.2
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
.+++||||||++..+..+...|...||.|..+.++.+|++.+.... ||+||+|+ ||+++|+
T Consensus 3 ~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~------------------~dlvi~d~-~~~~~g~ 63 (142)
T 2qxy_A 3 LTPTVMVVDESRITFLAVKNALEKDGFNVIWAKNEQEAFTFLRREK------------------IDLVFVDV-FEGEESL 63 (142)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHGGGTCEEEEESSHHHHHHHHTTSC------------------CSEEEEEC-TTTHHHH
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHhccC------------------CCEEEEeC-CCCCcHH
Confidence 3579999999999999999999999999999999999999996543 56999999 9999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
++++.|+...+ ++|||++|+..+......+++.|+++||.||++.++|...+..++...
T Consensus 64 ~~~~~l~~~~~--~~pii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~l~~~i~~~~~~~ 122 (142)
T 2qxy_A 64 NLIRRIREEFP--DTKVAVLSAYVDKDLIINSVKAGAVDYILKPFRLDYLLERVKKIISST 122 (142)
T ss_dssp HHHHHHHHHCT--TCEEEEEESCCCHHHHHHHHHHTCSCEEESSCCHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHCC--CCCEEEEECCCCHHHHHHHHHCCcceeEeCCCCHHHHHHHHHHHHhhc
Confidence 99999998754 899999999999999999999999999999999999988777776543
No 60
>1dz3_A Stage 0 sporulation protein A; response regulator, domain swapping; 1.65A {Bacillus stearothermophilus} SCOP: c.23.1.1 PDB: 1qmp_A*
Probab=99.86 E-value=3.7e-21 Score=143.72 Aligned_cols=118 Identities=20% Similarity=0.354 Sum_probs=103.9
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcC-CCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTS-SYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
++||||||++..+..+..+|... ||.+. .+.++.+|++.+.... ||+||+|+.||+++|+
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~------------------~dlvllD~~l~~~~g~ 64 (130)
T 1dz3_A 3 IKVCIADDNRELVSLLDEYISSQPDMEVIGTAYNGQDCLQMLEEKR------------------PDILLLDIIMPHLDGL 64 (130)
T ss_dssp EEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHHHHC------------------CSEEEEESCCSSSCHH
T ss_pred eEEEEEcCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhcCC------------------CCEEEEecCCCCCCHH
Confidence 68999999999999999999887 88876 7999999999986544 4599999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
++++.|++.. .+.+|||++|+..+.....++++.||++||.||++.++|...+..+.+
T Consensus 65 ~~~~~l~~~~-~~~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~~i~~~~~ 122 (130)
T 1dz3_A 65 AVLERIRAGF-EHQPNVIMLTAFGQEDVTKKAVELGASYFILKPFDMENLAHHIRQVYG 122 (130)
T ss_dssp HHHHHHHHHC-SSCCEEEEEEETTCHHHHHHHHHTTCEEEEECSSCCTTHHHHHHHHHH
T ss_pred HHHHHHHhcC-CCCCcEEEEecCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHhc
Confidence 9999999852 237899999999999999999999999999999999999877766543
No 61
>3q9s_A DNA-binding response regulator; DNA binding protein; 2.40A {Deinococcus radiodurans}
Probab=99.86 E-value=2.4e-21 Score=161.67 Aligned_cols=118 Identities=18% Similarity=0.375 Sum_probs=106.7
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
..++||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|+
T Consensus 36 ~~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~------------------~DlvllD~~lp~~~G~ 97 (249)
T 3q9s_A 36 NEQRILVIEDDHDIANVLRMDLTDAGYVVDHADSAMNGLIKAREDH------------------PDLILLDLGLPDFDGG 97 (249)
T ss_dssp -CCEEEEECSCHHHHHHHHHHHHTTTCEEEEESSHHHHHHHHHHSC------------------CSEEEEECCSCHHHHH
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHhcCC------------------CCEEEEcCCCCCCCHH
Confidence 3579999999999999999999999999999999999999986544 5599999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
++++.|+.. +.+|||++|+..+...+.+++++||++||.||++.++|...+..+++
T Consensus 98 ~l~~~lr~~---~~~~iI~lt~~~~~~~~~~a~~~Ga~~yl~Kp~~~~~L~~~i~~~l~ 153 (249)
T 3q9s_A 98 DVVQRLRKN---SALPIIVLTARDTVEEKVRLLGLGADDYLIKPFHPDELLARVKVQLR 153 (249)
T ss_dssp HHHHHHHTT---CCCCEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHC
T ss_pred HHHHHHHcC---CCCCEEEEECCCCHHHHHHHHHCCCcEEEECCCCHHHHHHHHHHHHh
Confidence 999999973 37999999999999999999999999999999999999877766654
No 62
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=99.86 E-value=3.7e-21 Score=146.23 Aligned_cols=118 Identities=24% Similarity=0.335 Sum_probs=98.3
Q ss_pred ceEEEEeCCHHHHHHHHHHhhc--CCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKT--SSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~--~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
++||||||++..+..+...|.. .||.+. .+.++.+++..+.... ||+||+|+.||+++|
T Consensus 3 ~~ILivdd~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~al~~~~~~~------------------~dlvllD~~lp~~~g 64 (141)
T 3cu5_A 3 LRILIVDDEKLTRDGLIANINWKALSFDQIDQADDGINAIQIALKHP------------------PNVLLTDVRMPRMDG 64 (141)
T ss_dssp CEEEEECSCHHHHHHHHHHCCGGGSCCSEEEEESSHHHHHHHHTTSC------------------CSEEEEESCCSSSCH
T ss_pred ceEEEEeCCHHHHHHHHHHHHHccCCcEEeeecccHHHHHHHHhcCC------------------CCEEEEeCCCCCCCH
Confidence 6899999999999999999973 588777 8999999999986443 569999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
+++++.|++..+ .+|||++|+..+......+++.|+++||.||++.++|...+..++..
T Consensus 65 ~~l~~~l~~~~~--~~~ii~ls~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~~ 123 (141)
T 3cu5_A 65 IELVDNILKLYP--DCSVIFMSGYSDKEYLKAAIKFRAIRYVEKPIDPSEIMDALKQSIQT 123 (141)
T ss_dssp HHHHHHHHHHCT--TCEEEEECCSTTTCCC------CCCEEECSSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCC--CCcEEEEeCCCcHHHHHHHHhCCccEEEeCCCCHHHHHHHHHHHHHH
Confidence 999999998654 89999999988888888999999999999999999998777766543
No 63
>2jba_A Phosphate regulon transcriptional regulatory PROT; transcription factor, sensory transduction, phosphate regula transcription regulation; 1.45A {Escherichia coli} PDB: 2jba_B 1b00_A 2iyn_A 2jb9_A 1zes_A
Probab=99.86 E-value=7.6e-22 Score=146.48 Aligned_cols=118 Identities=25% Similarity=0.403 Sum_probs=105.4
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
.+||||||++..+..+...|...||.|..+.++.++++.+... .||+||+|+.||+++|+++
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~~~~~a~~~~~~~------------------~~dlvi~D~~l~~~~g~~~ 64 (127)
T 2jba_A 3 RRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDSAVNQLNEP------------------WPDLILLAWMLPGGSGIQF 64 (127)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEECSHHHHHTTCSSS------------------CCSEEEEESEETTEEHHHH
T ss_pred cEEEEEcCCHHHHHHHHHHHHHCCceEEEeCCHHHHHHHHhcc------------------CCCEEEEecCCCCCCHHHH
Confidence 5899999999999999999999999999999999999887543 3569999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
+++|++....+.+|||++|+..+......+++.|+++||.||++.++|...+..++
T Consensus 65 ~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~ 120 (127)
T 2jba_A 65 IKHLRRESMTRDIPVVMLTARGEEEDRVRGLETGADDCITKPFSPKELVARIKAVM 120 (127)
T ss_dssp HHHHHTSTTTTTSCEEEEEETTHHHHHHTTCCCSCSEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHhCcccCCCCEEEEeCCCCHHHHHHHHhcCCCeEEeCCCCHHHHHHHHHHHH
Confidence 99999865345899999999988888889999999999999999999977666554
No 64
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=99.86 E-value=4.4e-21 Score=144.15 Aligned_cols=117 Identities=22% Similarity=0.400 Sum_probs=105.3
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
.+||||||++..+..+...|...||.|..+.++.+++..+.... ||+||+|+.||+++|+++
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~------------------~dlvl~D~~l~~~~g~~~ 65 (136)
T 1mvo_A 4 KKILVVDDEESIVTLLQYNLERSGYDVITASDGEEALKKAETEK------------------PDLIVLDVMLPKLDGIEV 65 (136)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHC------------------CSEEEEESSCSSSCHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCcEEEEecCHHHHHHHHhhcC------------------CCEEEEecCCCCCCHHHH
Confidence 68999999999999999999999999999999999999986544 459999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
++.|++..+ .+|||++|+..+......+++.|+++||.||++.++|...+..++.
T Consensus 66 ~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~ 120 (136)
T 1mvo_A 66 CKQLRQQKL--MFPILMLTAKDEEFDKVLGLELGADDYMTKPFSPREVNARVKAILR 120 (136)
T ss_dssp HHHHHHTTC--CCCEEEEECTTCCCCHHHHHHTTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCC--CCCEEEEECCCCHHHHHHHHhCCCCEEEECCCCHHHHHHHHHHHHH
Confidence 999998754 7999999998888888899999999999999999999877766554
No 65
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=99.86 E-value=2.9e-21 Score=161.67 Aligned_cols=120 Identities=29% Similarity=0.553 Sum_probs=109.0
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
..++||||||++..+..+..+|+..||.|..+.++.+|++.+.... ||+||+|+.||+++|+
T Consensus 128 ~~~~ILivdd~~~~~~~l~~~L~~~g~~v~~a~~~~eal~~l~~~~------------------~dlvl~D~~mp~~~G~ 189 (254)
T 2ayx_A 128 DDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNH------------------IDIVLSDVNMPNMDGY 189 (254)
T ss_dssp CCCEEEEEESSHHHHHHHHHHHHHHTSEEEEECCSHHHHHHHHHSC------------------CSEEEEEESSCSSCCH
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHHcCCEEEEECCHHHHHHHHHhCC------------------CCEEEEcCCCCCCCHH
Confidence 4589999999999999999999999999999999999999996543 5699999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
++++.||+..+ .+|||++|+........++++.|+++||.||++.++|...+.+++..
T Consensus 190 ~l~~~ir~~~~--~~piI~lt~~~~~~~~~~~~~~G~~~~l~KP~~~~~L~~~l~~~~~~ 247 (254)
T 2ayx_A 190 RLTQRIRQLGL--TLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVIKQTLTLYAER 247 (254)
T ss_dssp HHHHHHHHHHC--CSCEEEEESSTTSHHHHHHHHCCCEEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC--CCcEEEEECCCCHHHHHHHHHcCCceEEECCCCHHHHHHHHHHHHHH
Confidence 99999998754 89999999999899999999999999999999999998877776543
No 66
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=99.86 E-value=1.4e-20 Score=144.77 Aligned_cols=121 Identities=29% Similarity=0.356 Sum_probs=109.4
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
.+++||||||++..+..+..+|...||.|..+.++.+|+..+.... ||+||+|+.||+++|+
T Consensus 6 ~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~~------------------~dlvi~d~~l~~~~g~ 67 (154)
T 2rjn_A 6 KNYTVMLVDDEQPILNSLKRLIKRLGCNIITFTSPLDALEALKGTS------------------VQLVISDMRMPEMGGE 67 (154)
T ss_dssp SCCEEEEECSCHHHHHHHHHHHHTTTCEEEEESCHHHHHHHHTTSC------------------CSEEEEESSCSSSCHH
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHhcCC------------------CCEEEEecCCCCCCHH
Confidence 4689999999999999999999999999999999999999996443 5699999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhc-ccccccCCCCHHHHHHhhHHHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEG-AEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~G-a~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
++++.|+...+ .+|||++|+..+......++..| +++||.||++.++|...+..++...
T Consensus 68 ~~~~~l~~~~~--~~~ii~ls~~~~~~~~~~~~~~g~~~~~l~kP~~~~~L~~~i~~~~~~~ 127 (154)
T 2rjn_A 68 VFLEQVAKSYP--DIERVVISGYADAQATIDAVNRGKISRFLLKPWEDEDVFKVVEKGLQLA 127 (154)
T ss_dssp HHHHHHHHHCT--TSEEEEEECGGGHHHHHHHHHTTCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCC--CCcEEEEecCCCHHHHHHHHhccchheeeeCCCCHHHHHHHHHHHHHHH
Confidence 99999998754 89999999998888899999998 9999999999999988777776544
No 67
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=99.86 E-value=1.8e-21 Score=147.37 Aligned_cols=124 Identities=27% Similarity=0.439 Sum_probs=108.9
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
...+++||||||++..+..+..+|...||.|..+.++.+|++.+... .||+||+|+.||+++
T Consensus 4 ~~~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~------------------~~dlii~d~~l~~~~ 65 (142)
T 3cg4_A 4 AEHKGDVMIVDDDAHVRIAVKTILSDAGFHIISADSGGQCIDLLKKG------------------FSGVVLLDIMMPGMD 65 (142)
T ss_dssp --CCCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTC------------------CCEEEEEESCCSSSC
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHHCCeEEEEeCCHHHHHHHHHhc------------------CCCEEEEeCCCCCCC
Confidence 34578999999999999999999999999999999999999999654 356999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
|+++++.|+.....+.+|||++|+..+......+++.|+++||.||++.++|...+..++..
T Consensus 66 g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~~ 127 (142)
T 3cg4_A 66 GWDTIRAILDNSLEQGIAIVMLTAKNAPDAKMIGLQEYVVDYITKPFDNEDLIEKTTFFMGF 127 (142)
T ss_dssp HHHHHHHHHHTTCCTTEEEEEEECTTCCCCSSTTGGGGEEEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCCCEEEEECCCCHHHHHHHHhcCccEEEeCCCCHHHHHHHHHHHHHH
Confidence 99999999984334589999999988888888899999999999999999998877776643
No 68
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=99.86 E-value=1.4e-21 Score=148.99 Aligned_cols=121 Identities=9% Similarity=0.184 Sum_probs=107.9
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCC-CEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCccc-ccccEEEEeCCCCCC
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSS-YQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQE-VGVNLVITDYCMPGM 90 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g-~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~-~~~dlIilD~~mp~~ 90 (241)
....+||||||++..+..+..+|+..| |.|..+.++.+++..+.. . ..|||||+|+.||++
T Consensus 18 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~-----------------~~~~~dlvi~D~~l~~~ 80 (146)
T 4dad_A 18 QGMINILVASEDASRLAHLARLVGDAGRYRVTRTVGRAAQIVQRTD-----------------GLDAFDILMIDGAALDT 80 (146)
T ss_dssp GGGCEEEEECSCHHHHHHHHHHHHHHCSCEEEEECCCHHHHTTCHH-----------------HHTTCSEEEEECTTCCH
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHhhCCCeEEEEeCCHHHHHHHHHh-----------------cCCCCCEEEEeCCCCCc
Confidence 456899999999999999999999988 999999999988877642 1 346699999999999
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+|+++++.|+...+ .+|||++|+..+......+++.||++||.||++.++|...+..++.
T Consensus 81 ~g~~~~~~l~~~~~--~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~ 140 (146)
T 4dad_A 81 AELAAIEKLSRLHP--GLTCLLVTTDASSQTLLDAMRAGVRDVLRWPLEPRALDDALKRAAA 140 (146)
T ss_dssp HHHHHHHHHHHHCT--TCEEEEEESCCCHHHHHHHHTTTEEEEEESSCCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCC--CCcEEEEeCCCCHHHHHHHHHhCCceeEcCCCCHHHHHHHHHHHHh
Confidence 99999999998764 8999999999999999999999999999999999999887776654
No 69
>3dzd_A Transcriptional regulator (NTRC family); sigma43 activator, AAA+ ATPase, response regulator, transcriptional activator, ATP-binding; HET: ADP; 2.40A {Aquifex aeolicus} PDB: 1zit_A 2jrl_A
Probab=99.86 E-value=1.4e-21 Score=172.18 Aligned_cols=116 Identities=22% Similarity=0.319 Sum_probs=106.9
Q ss_pred eEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHH
Q 026239 17 HVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLL 96 (241)
Q Consensus 17 ~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll 96 (241)
+||||||++..+..+..+|+..||.|..+.++.+|++.+.... ||+||+|+.||+++|++++
T Consensus 2 ~ILiVDDd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~l~~~~------------------~DlvllDi~mP~~dG~ell 63 (368)
T 3dzd_A 2 RVLVVDDEESITSSLSAILEEEGYHPDTAKTLREAEKKIKELF------------------FPVIVLDVWMPDGDGVNFI 63 (368)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHBC------------------CSEEEEESEETTEETTTHH
T ss_pred EEEEEeCCHHHHHHHHHHHHHcCCEEEEECCHHHHHHHHHhCC------------------CCEEEEeCCCCCCCHHHHH
Confidence 7999999999999999999999999999999999999996554 5599999999999999999
Q ss_pred HHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 97 KKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 97 ~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
++|+...+ ++|||++|+..+.+.+.++++.||++||.||++.++|...+.+++.
T Consensus 64 ~~lr~~~~--~~pvI~lT~~~~~~~~~~a~~~Ga~~yl~KP~~~~~L~~~i~~~l~ 117 (368)
T 3dzd_A 64 DFIKENSP--DSVVIVITGHGSVDTAVKAIKKGAYEFLEKPFSVERFLLTIKHAFE 117 (368)
T ss_dssp HHHHHHCT--TCEEEEEECSSCCHHHHHHHHHTCCEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHhhCC--CCeEEEEeCCCCHHHHHHHHhcCcceEEeCCCCHHHHHHHHHHHHH
Confidence 99998765 8999999999999999999999999999999999999877766654
No 70
>1dcf_A ETR1 protein; beta-alpha five sandwich, transferase; 2.50A {Arabidopsis thaliana} SCOP: c.23.1.2
Probab=99.86 E-value=5.9e-21 Score=143.73 Aligned_cols=119 Identities=27% Similarity=0.478 Sum_probs=101.8
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
..++||||||++..+..+..+|...||.|..+.++.+|++.+... . |+||+|+.||+++|+
T Consensus 6 ~~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~------------------~-dlvllD~~lp~~~g~ 66 (136)
T 1dcf_A 6 TGLKVLVMDENGVSRMVTKGLLVHLGCEVTTVSSNEECLRVVSHE------------------H-KVVFMDVCMPGVENY 66 (136)
T ss_dssp TTCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHCCTT------------------C-SEEEEECCSSTTTTT
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHcCCeEEEeCCHHHHHHHHhcc------------------C-CEEEEeCCCCCCcHH
Confidence 468999999999999999999999999999999999999988432 2 599999999999999
Q ss_pred HHHHHHHhcCCC---CCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 94 DLLKKIKESSSL---RDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 94 ~ll~~ir~~~~~---~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
++++.|++..+. ...+||++|+..+......+++.|+++||.||++.++|...+..++
T Consensus 67 ~~~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~l~~~~ 127 (136)
T 1dcf_A 67 QIALRIHEKFTKQRHQRPLLVALSGNTDKSTKEKCMSFGLDGVLLKPVSLDNIRDVLSDLL 127 (136)
T ss_dssp HHHHHHHHHHC-CCSCCCEEEEEESCCSHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhccCCCceEEEEeCCCCHHHHHHHHHcCCCeEEECCCCHHHHHHHHHHHh
Confidence 999999853211 1235788999988888999999999999999999999977666554
No 71
>1s8n_A Putative antiterminator; RV1626, structural genomics, transcriptional antiterminator, component system, PSI; 1.48A {Mycobacterium tuberculosis} SCOP: c.23.1.1 PDB: 1sd5_A
Probab=99.86 E-value=5.3e-21 Score=154.32 Aligned_cols=119 Identities=25% Similarity=0.407 Sum_probs=106.9
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
..+||||||++..+..+..+|...||.|. .+.++.+|++.+.... ||+||+|+.||+++|+
T Consensus 13 ~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~al~~~~~~~------------------~dlvi~D~~~p~~~g~ 74 (205)
T 1s8n_A 13 PRRVLIAEDEALIRMDLAEMLREEGYEIVGEAGDGQEAVELAELHK------------------PDLVIMDVKMPRRDGI 74 (205)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHC------------------CSEEEEESSCSSSCHH
T ss_pred CccEEEEECCHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcC------------------CCEEEEeCCCCCCChH
Confidence 36999999999999999999999999988 8999999999986544 5599999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
++++.|+... ..|||++|+..+......+++.||++||.||++.++|...+..++...
T Consensus 75 ~~~~~l~~~~---~~pii~lt~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~~~ 132 (205)
T 1s8n_A 75 DAASEIASKR---IAPIVVLTAFSQRDLVERARDAGAMAYLVKPFSISDLIPAIELAVSRF 132 (205)
T ss_dssp HHHHHHHHTT---CSCEEEEEEGGGHHHHHTTGGGSCEEEEEESCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcC---CCCEEEEecCCCHHHHHHHHhcCCcEEEeCCCCHHHHHHHHHHHHHHH
Confidence 9999999865 349999999998889999999999999999999999988777776554
No 72
>3n53_A Response regulator receiver modulated diguanylate; diguanylate cyclase, protein structure I II(PSI II), NYSGXRC, structural genomics; 2.20A {Pelobacter carbinolicus} SCOP: c.23.1.0
Probab=99.86 E-value=1.4e-21 Score=147.93 Aligned_cols=121 Identities=26% Similarity=0.399 Sum_probs=99.5
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
+.+||||||++..+..+..+|... |.|..+.++.+|++.+.... ||+||+|+.||+++|++
T Consensus 3 ~~~iLivdd~~~~~~~l~~~l~~~-~~v~~~~~~~~a~~~~~~~~------------------~dlvi~D~~l~~~~g~~ 63 (140)
T 3n53_A 3 LKKILIIDQQDFSRIELKNFLDSE-YLVIESKNEKEALEQIDHHH------------------PDLVILDMDIIGENSPN 63 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTT-SEEEEESSHHHHHHHHHHHC------------------CSEEEEETTC------C
T ss_pred CCEEEEEeCCHHHHHHHHHHHHhc-ceEEEeCCHHHHHHHHhcCC------------------CCEEEEeCCCCCCcHHH
Confidence 579999999999999999999987 99999999999999996544 55999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
+++.|+.....+.+|||++|+..+.+...++++.|+++||.||++.++|...+..+++++
T Consensus 64 ~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~~ 123 (140)
T 3n53_A 64 LCLKLKRSKGLKNVPLILLFSSEHKEAIVNGLHSGADDYLTKPFNRNDLLSRIEIHLRTQ 123 (140)
T ss_dssp HHHHHHTSTTCTTCCEEEEECC----CTTTTTTCCCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCcccCCCCEEEEecCCCHHHHHHHHhcCCCeeeeCCCCHHHHHHHHHHHHhhH
Confidence 999999876446899999999988888889999999999999999999988777776543
No 73
>1a04_A Nitrate/nitrite response regulator protein NARL; signal transduction protein, response regulators, two- component systems; 2.20A {Escherichia coli} SCOP: a.4.6.2 c.23.1.1 PDB: 1rnl_A
Probab=99.86 E-value=1e-20 Score=153.54 Aligned_cols=120 Identities=25% Similarity=0.408 Sum_probs=107.3
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcC-CCEE-EEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTS-SYQV-TTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~-g~~v-~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
.+++||||||++..+..+..+|... +|.+ ..+.++.+|++.+.... ||+||+|+.||+++
T Consensus 4 ~~~~ilivdd~~~~~~~l~~~L~~~~~~~vv~~~~~~~~al~~~~~~~------------------~dlvllD~~lp~~~ 65 (215)
T 1a04_A 4 EPATILLIDDHPMLRTGVKQLISMAPDITVVGEASNGEQGIELAESLD------------------PDLILLDLNMPGMN 65 (215)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHTTCTTEEEEEEESSHHHHHHHHHHHC------------------CSEEEEETTSTTSC
T ss_pred CceEEEEECCCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHhcC------------------CCEEEEeCCCCCCc
Confidence 4589999999999999999999976 4887 68999999999986544 55999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
|+++++.|+...+ .+|||++|+..+.+....+++.||++||.||++.++|...+..++.+
T Consensus 66 g~~~~~~lr~~~~--~~~ii~ls~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~i~~~~~~ 125 (215)
T 1a04_A 66 GLETLDKLREKSL--SGRIVVFSVSNHEEDVVTALKRGADGYLLKDMEPEDLLKALHQAAAG 125 (215)
T ss_dssp HHHHHHHHHHSCC--CSEEEEEECCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHhCC--CCcEEEEECCCCHHHHHHHHHcCCcEEEeCCCCHHHHHHHHHHHHcC
Confidence 9999999998754 89999999999999999999999999999999999998877776653
No 74
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=99.86 E-value=1.3e-20 Score=144.67 Aligned_cols=122 Identities=26% Similarity=0.395 Sum_probs=107.6
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCCCE--EEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSSYQ--VTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g~~--v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
.....+||||||++..+..+..+|...|+. |..+.++.+|++.+.... ||+||+|+.||+
T Consensus 12 ~~~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~------------------~dlii~d~~l~~ 73 (152)
T 3eul_A 12 QPEKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHL------------------PDVALLDYRMPG 73 (152)
T ss_dssp --CCEEEEEECSSHHHHHHHHHHHHHHSSEEEEEEESSHHHHHHHHHHHC------------------CSEEEEETTCSS
T ss_pred CCceEEEEEEcCCHHHHHHHHHHHhhCCCeEEEEEeCCHHHHHHHHHhcC------------------CCEEEEeCCCCC
Confidence 456799999999999999999999988854 458999999999996554 559999999999
Q ss_pred CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 90 MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 90 ~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
++|+++++.|+...+ .+|||++|+..+......+++.|+++||.||++.++|...+..++.+
T Consensus 74 ~~g~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~g~~~~l~Kp~~~~~l~~~i~~~~~~ 135 (152)
T 3eul_A 74 MDGAQVAAAVRSYEL--PTRVLLISAHDEPAIVYQALQQGAAGFLLKDSTRTEIVKAVLDCAKG 135 (152)
T ss_dssp SCHHHHHHHHHHTTC--SCEEEEEESCCCHHHHHHHHHTTCSEEEETTCCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHhcCC--CCeEEEEEccCCHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHHHcC
Confidence 999999999998754 89999999999999999999999999999999999998877776654
No 75
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=99.86 E-value=1.3e-20 Score=142.17 Aligned_cols=122 Identities=16% Similarity=0.295 Sum_probs=108.5
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-C
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-G 89 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-~ 89 (241)
...+++||||||++..+..+...|+..||.|. .+.++.+|+..+.... ||+||+|+.|| +
T Consensus 6 ~~~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~------------------~dlii~d~~~~~~ 67 (140)
T 3cg0_A 6 SDDLPGVLIVEDGRLAAATLRIQLESLGYDVLGVFDNGEEAVRCAPDLR------------------PDIALVDIMLCGA 67 (140)
T ss_dssp --CCCEEEEECCBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHC------------------CSEEEEESSCCSS
T ss_pred CCCCceEEEEECCHHHHHHHHHHHHHCCCeeEEEECCHHHHHHHHHhCC------------------CCEEEEecCCCCC
Confidence 34578999999999999999999999999999 5999999999996544 55999999998 7
Q ss_pred CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 90 MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 90 ~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
++|+++++.|+.. + .+|||++|+..+......+++.|+++||.||++.++|...+..+++..
T Consensus 68 ~~g~~~~~~l~~~-~--~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~~~ 129 (140)
T 3cg0_A 68 LDGVETAARLAAG-C--NLPIIFITSSQDVETFQRAKRVNPFGYLAKPVAADTLHRSIEMAIHKK 129 (140)
T ss_dssp SCHHHHHHHHHHH-S--CCCEEEEECCCCHHHHHHHHTTCCSEEEEESCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhC-C--CCCEEEEecCCCHHHHHHHHhcCCCEEEeCCCCHHHHHHHHHHHHhcc
Confidence 9999999999987 3 899999999999999999999999999999999999988877776544
No 76
>2jk1_A HUPR, hydrogenase transcriptional regulatory protein HU; nucleotide-binding, transcription regulation; 2.10A {Rhodobacter capsulatus} PDB: 2vui_B 2vuh_B
Probab=99.86 E-value=3.2e-20 Score=140.28 Aligned_cols=118 Identities=22% Similarity=0.330 Sum_probs=103.6
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
.+||||||++..+..+..+|... |.|..+.++.+|+..+... .||+||+|+.||+++|+++
T Consensus 2 ~~Ilivdd~~~~~~~l~~~l~~~-~~v~~~~~~~~a~~~~~~~------------------~~dlvl~D~~lp~~~g~~~ 62 (139)
T 2jk1_A 2 PAILLVDDEPHSLAAMKLALEDD-FDVLTAQGAEAAIAILEEE------------------WVQVIICDQRMPGRTGVDF 62 (139)
T ss_dssp CEEEEECSSHHHHHHHHHHHTTT-SCEEEESSHHHHHHHHHHS------------------CEEEEEEESCCSSSCHHHH
T ss_pred CeEEEEcCCHHHHHHHHHHhhcC-ceEEEcCCHHHHHHHHhcC------------------CCCEEEEeCCCCCCcHHHH
Confidence 47999999999999999999875 9999999999999998643 3669999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHh-cccccccCCCCHHHHHHhhHHHHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEE-GAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~-Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
++.|+...+ .+|+|++|+..+......++.. |+++||.||++.++|...+..++...
T Consensus 63 ~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~~ga~~~l~KP~~~~~L~~~i~~~~~~~ 120 (139)
T 2jk1_A 63 LTEVRERWP--ETVRIIITGYTDSASMMAAINDAGIHQFLTKPWHPEQLLSSARNAARMF 120 (139)
T ss_dssp HHHHHHHCT--TSEEEEEESCTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCC--CCcEEEEeCCCChHHHHHHHHhhchhhhccCCCCHHHHHHHHHHHHHHH
Confidence 999998754 7899999998888888888876 59999999999999988777766544
No 77
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=99.85 E-value=1e-20 Score=145.39 Aligned_cols=120 Identities=19% Similarity=0.320 Sum_probs=108.0
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhc-CCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKT-SSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~-~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
.++++||||||++..+..+..+|.. .||.+. .+.++.+|+..+.... ||+||+|+.||++
T Consensus 3 ~~~~~ILivdd~~~~~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l~~~~------------------~dlii~D~~l~~~ 64 (153)
T 3cz5_A 3 LSTARIMLVDDHPIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRETT------------------PDIVVMDLTLPGP 64 (153)
T ss_dssp -CCEEEEEECSCHHHHHHHHHHHTTSTTEEEEEEESSHHHHHHHHHTTC------------------CSEEEECSCCSSS
T ss_pred CcccEEEEECCcHHHHHHHHHHHhhCCCcEEEEEeCCHHHHHHHHhcCC------------------CCEEEEecCCCCC
Confidence 3468999999999999999999998 799988 8999999999996544 5599999999999
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+|+++++.|+...+ .+|||++|+..+......+++.|+++||.||++.++|...+..++.
T Consensus 65 ~g~~~~~~l~~~~~--~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~i~~~~~ 124 (153)
T 3cz5_A 65 GGIEATRHIRQWDG--AARILIFTMHQGSAFALKAFEAGASGYVTKSSDPAELVQAIEAILA 124 (153)
T ss_dssp CHHHHHHHHHHHCT--TCCEEEEESCCSHHHHHHHHHTTCSEEEETTSCTTHHHHHHHHHTT
T ss_pred CHHHHHHHHHHhCC--CCeEEEEECCCCHHHHHHHHHCCCcEEEecCCCHHHHHHHHHHHHh
Confidence 99999999998754 8999999999999999999999999999999999999887777654
No 78
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=99.85 E-value=4.6e-21 Score=140.15 Aligned_cols=113 Identities=25% Similarity=0.417 Sum_probs=99.8
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
.+||||||++..+..+...|...||.|..+.++.+|++.+.... ||+||+|+.||+++|+++
T Consensus 2 ~~ilivdd~~~~~~~l~~~l~~~~~~v~~~~~~~~a~~~~~~~~------------------~dlvl~D~~l~~~~g~~~ 63 (116)
T 3a10_A 2 KRILVVDDEPNIRELLKEELQEEGYEIDTAENGEEALKKFFSGN------------------YDLVILDIEMPGISGLEV 63 (116)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSC------------------CSEEEECSCCSSSCHHHH
T ss_pred cEEEEEeCCHHHHHHHHHHHHHCCCEEEEeCCHHHHHHHHhcCC------------------CCEEEEECCCCCCCHHHH
Confidence 58999999999999999999999999999999999999986544 559999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHL 150 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l 150 (241)
++.|+...+ .+|||++|+..+.. ..+++.|+++|+.||++.++|...+..+
T Consensus 64 ~~~l~~~~~--~~~ii~~s~~~~~~--~~~~~~g~~~~l~Kp~~~~~l~~~i~~~ 114 (116)
T 3a10_A 64 AGEIRKKKK--DAKIILLTAYSHYR--SDMSSWAADEYVVKSFNFDELKEKVKKL 114 (116)
T ss_dssp HHHHHHHCT--TCCEEEEESCGGGG--GCGGGGGSSEEEECCSSTHHHHHHHHHH
T ss_pred HHHHHccCC--CCeEEEEECCcchH--HHHHhccccceEECCCCHHHHHHHHHHH
Confidence 999998754 89999999876554 6788999999999999999987666543
No 79
>1kgs_A DRRD, DNA binding response regulator D; DNA-binding protein, ALPH-beta sandwich, winged-helix, helix helix, DNA binding protein; HET: DNA MSE; 1.50A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nnn_A*
Probab=99.85 E-value=9.2e-21 Score=154.64 Aligned_cols=118 Identities=25% Similarity=0.390 Sum_probs=107.6
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
++||||||++..+..+..+|...||.|..+.++.+|+..+.... ||+||+|+.||+++|+++
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~------------------~dlvllD~~l~~~~g~~~ 64 (225)
T 1kgs_A 3 VRVLVVEDERDLADLITEALKKEMFTVDVCYDGEEGMYMALNEP------------------FDVVILDIMLPVHDGWEI 64 (225)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSC------------------CSEEEEESCCSSSCHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHhcCC------------------CCEEEEeCCCCCCCHHHH
Confidence 68999999999999999999999999999999999999986544 559999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
++.|+...+ ++|||++|+..+......+++.||++||.||++.++|...+..++++
T Consensus 65 ~~~lr~~~~--~~~ii~ls~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~~~ 120 (225)
T 1kgs_A 65 LKSMRESGV--NTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRR 120 (225)
T ss_dssp HHHHHHTTC--CCCEEEEESSCHHHHHHHTCCCCCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC--CCCEEEEeCCCCHHHHHHHHhCCccEEEeCCCCHHHHHHHHHHHHhh
Confidence 999998754 89999999999888899999999999999999999998877776654
No 80
>1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=99.85 E-value=2.3e-20 Score=168.31 Aligned_cols=121 Identities=30% Similarity=0.468 Sum_probs=109.6
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
.+||||||++..+..+..+|...||.|..+.++.+|++.+.... |||||+|+.||+++|+++
T Consensus 2 ~~iLivdD~~~~~~~l~~~L~~~~~~v~~a~~~~~al~~~~~~~------------------~dlvllD~~mp~~~G~~~ 63 (459)
T 1w25_A 2 ARILVVDDIEANVRLLEAKLTAEYYEVSTAMDGPTALAMAARDL------------------PDIILLDVMMPGMDGFTV 63 (459)
T ss_dssp CEEEEECSSTTHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHHC------------------CSEEEEESCCSSSCHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHHcCCEEEEECCHHHHHHHHhcCC------------------CCEEEEcCCCCCCCHHHH
Confidence 58999999999999999999999999999999999999986544 459999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
++.|+.....+++|||++|+..+.....++++.||++||.||++.++|...+..+++..
T Consensus 64 ~~~l~~~~~~~~~pii~lt~~~~~~~~~~a~~~Ga~~~l~KP~~~~~l~~~i~~~~~~~ 122 (459)
T 1w25_A 64 CRKLKDDPTTRHIPVVLITALDGRGDRIQGLESGASDFLTKPIDDVMLFARVRSLTRFK 122 (459)
T ss_dssp HHHHHHSTTTTTSCEEEEECSSCHHHHHHHHHHTCCEEEESSCCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCcccCCCCEEEEECCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHHH
Confidence 99999865456899999999999999999999999999999999999988777766543
No 81
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=99.85 E-value=1.7e-20 Score=141.48 Aligned_cols=118 Identities=25% Similarity=0.261 Sum_probs=106.5
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-----C
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-----G 89 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-----~ 89 (241)
+++||||||++..+..+...|+..||.|..+.++.+|++.+... .||+||+|+.|| +
T Consensus 3 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~------------------~~dlvi~d~~~~~~~~~~ 64 (140)
T 2qr3_A 3 LGTIIIVDDNKGVLTAVQLLLKNHFSKVITLSSPVSLSTVLREE------------------NPEVVLLDMNFTSGINNG 64 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTTSSEEEEECCHHHHHHHHHHS------------------CEEEEEEETTTTC-----
T ss_pred CceEEEEeCCHHHHHHHHHHHHhCCcEEEEeCCHHHHHHHHHcC------------------CCCEEEEeCCcCCCCCCC
Confidence 57999999999999999999999999999999999999999643 366999999999 9
Q ss_pred CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 90 MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 90 ~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
++|+++++.|+...+ .+|||++|+..+......+++.|+++||.||++.++|...+..++.
T Consensus 65 ~~g~~~~~~l~~~~~--~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~l~~~~~ 125 (140)
T 2qr3_A 65 NEGLFWLHEIKRQYR--DLPVVLFTAYADIDLAVRGIKEGASDFVVKPWDNQKLLETLLNAAS 125 (140)
T ss_dssp CCHHHHHHHHHHHCT--TCCEEEEEEGGGHHHHHHHHHTTCCEEEEESCCHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHhhCc--CCCEEEEECCCCHHHHHHHHHcCchheeeCCCCHHHHHHHHHHHHH
Confidence 999999999998754 8999999999888899999999999999999999999877776654
No 82
>2qvg_A Two component response regulator; NYSGXRC, PSI-2, structural genomics, protein structure initiative; 1.50A {Legionella pneumophila subsp}
Probab=99.84 E-value=1.8e-20 Score=141.93 Aligned_cols=124 Identities=22% Similarity=0.381 Sum_probs=106.1
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCC--EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSY--QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
..++||||||++..+..+..+|+..|+ .|..+.++.+|+..+...... ....||+||+|+.||+++
T Consensus 6 ~~~~ILivdd~~~~~~~l~~~L~~~g~~~~v~~~~~~~~a~~~l~~~~~~------------~~~~~dlii~D~~l~~~~ 73 (143)
T 2qvg_A 6 DKVDILYLEDDEVDIQSVERVFHKISSLIKIEIAKSGNQALDMLYGRNKE------------NKIHPKLILLDINIPKMN 73 (143)
T ss_dssp -CCSEEEECCCHHHHHHHHHHHHHHCTTCCEEEESSHHHHHHHHHTCTTC------------CCCCCSEEEEETTCTTSC
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHHhCCCceEEEECCHHHHHHHHHhcccc------------cCCCCCEEEEecCCCCCC
Confidence 468999999999999999999998888 899999999999998641110 013467999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPH 149 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~ 149 (241)
|+++++.|+.....+.+|||++|+..+......+++.|+++||.||++.++|...+..
T Consensus 74 g~~~~~~l~~~~~~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~L~~~~~~ 131 (143)
T 2qvg_A 74 GIEFLKELRDDSSFTDIEVFVLTAAYTSKDKLAFESLNIRGHLIKPLDYGEAIKLFWI 131 (143)
T ss_dssp HHHHHHHHTTSGGGTTCEEEEEESCCCHHHHHHHTTTTCCEEEESSCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCccccCCcEEEEeCCCCHHHHHHHHhcCCCeEEECCCCHHHHHHHHHH
Confidence 9999999998653358999999999999999999999999999999999999766443
No 83
>1ny5_A Transcriptional regulator (NTRC family); AAA+ ATPase, sigma54 activator, bacterial transcription, DIM transcription; HET: ADP; 2.40A {Aquifex aeolicus} SCOP: c.23.1.1 c.37.1.20 PDB: 1ny6_A* 3m0e_A* 1zy2_A*
Probab=99.84 E-value=3.6e-20 Score=164.22 Aligned_cols=119 Identities=24% Similarity=0.467 Sum_probs=108.3
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
++||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|+++
T Consensus 1 m~ILIVDDd~~~~~~l~~~L~~~g~~v~~a~~~~eal~~l~~~~------------------~DlvllD~~mp~~dG~el 62 (387)
T 1ny5_A 1 MNVLVIEDDKVFRGLLEEYLSMKGIKVESAERGKEAYKLLSEKH------------------FNVVLLDLLLPDVNGLEI 62 (387)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHHTCEEEEESSHHHHHHHHHHSC------------------CSEEEEESBCSSSBHHHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHhCC------------------CCEEEEeCCCCCCCHHHH
Confidence 47999999999999999999988999999999999999996544 559999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
+++|+...+ ++|||++|+..+.+.+.++++.||++||.||++.++|...+.+++..+
T Consensus 63 l~~lr~~~~--~~pvIvlT~~~~~~~~~~a~~~Ga~dyl~KP~~~~~L~~~i~~~l~~~ 119 (387)
T 1ny5_A 63 LKWIKERSP--ETEVIVITGHGTIKTAVEAMKMGAYDFLTKPCMLEEIELTINKAIEHR 119 (387)
T ss_dssp HHHHHHHCT--TSEEEEEEETTCHHHHHHHHTTTCCEEEEESCCHHHHHHHHHHHHHHH
T ss_pred HHHHHhhCC--CCcEEEEeCCCCHHHHHHHHhcCceEEecCCCCHHHHHHHHHHHHHHH
Confidence 999998754 899999999999999999999999999999999999988777776543
No 84
>1ys7_A Transcriptional regulatory protein PRRA; response regulator, DNA binding domain, phosphorylation; 1.58A {Mycobacterium tuberculosis} SCOP: a.4.6.1 c.23.1.1 PDB: 1ys6_A
Probab=99.84 E-value=1.2e-20 Score=154.76 Aligned_cols=120 Identities=26% Similarity=0.411 Sum_probs=107.9
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
..++||||||++..+..+..+|...||.|..+.++.+|+..+.... ||+||+|+.||+++|+
T Consensus 6 ~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~------------------~dlvllD~~l~~~~g~ 67 (233)
T 1ys7_A 6 TSPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENR------------------PDAIVLDINMPVLDGV 67 (233)
T ss_dssp -CCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHHSC------------------CSEEEEESSCSSSCHH
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHhCC------------------CCEEEEeCCCCCCCHH
Confidence 4579999999999999999999999999999999999999986544 5599999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
++++.|+...+ ++|||++|+..+......+++.||++||.||++.++|...+..++++
T Consensus 68 ~~~~~l~~~~~--~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~~ 125 (233)
T 1ys7_A 68 SVVTALRAMDN--DVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRR 125 (233)
T ss_dssp HHHHHHHHTTC--CCCEEEEECCCTTTCCCTTTTTTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC--CCCEEEEEcCCCHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHhh
Confidence 99999998754 89999999998888888999999999999999999998877776654
No 85
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=99.84 E-value=4.6e-20 Score=160.93 Aligned_cols=120 Identities=22% Similarity=0.363 Sum_probs=106.1
Q ss_pred CcceEEEEeCCHHHHHHHHHHhh-cCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLK-TSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~-~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
...+||||||++..+..+..+|. ..||.|..+.++.+|++.+.... ||+||+|+.||+++|
T Consensus 17 ~~~~ilivdD~~~~~~~l~~~l~~~~~~~v~~~~~~~~al~~~~~~~------------------~dlvl~D~~mp~~~G 78 (358)
T 3bre_A 17 GAVMVLLVDDQAMIGEAVRRSLASEAGIDFHFCSDPQQAVAVANQIK------------------PTVILQDLVMPGVDG 78 (358)
T ss_dssp -CEEEEEECSCTTHHHHHHTTSSSCTTEEEEEECCHHHHHHHHHHHC------------------CSEEEEESBCSSSBH
T ss_pred cCceEEEEECCHHHHHHHHHHHHhccCcEEEEeCCHHHHHHHHHhCC------------------CCEEEEeCCCCCCCH
Confidence 35789999999999999999996 46899999999999999996544 459999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
+++++.|+.....+++|||++|+..+......+++.||++||.||++..+|...+..+.
T Consensus 79 ~~~~~~l~~~~~~~~~~ii~~s~~~~~~~~~~a~~~Ga~~~l~Kp~~~~~l~~~v~~~~ 137 (358)
T 3bre_A 79 LTLLAAYRGNPATRDIPIIVLSTKEEPTVKSAAFAAGANDYLVKLPDAIELVARIRYHS 137 (358)
T ss_dssp HHHHHHHTTSTTTTTSCEEEEESSCCHHHHHHHHHTTCSEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcCcccCCCcEEEEeCCCCHHHHHHHHhcChheEeeccCCHHHHHHHHHHHH
Confidence 99999999865456899999999999999999999999999999999999977665553
No 86
>2gkg_A Response regulator homolog; social motility, receiver domain, signalling, high resolutio signaling protein; 1.00A {Myxococcus xanthus} PDB: 2i6f_A 2nt4_A 2nt3_A
Probab=99.83 E-value=3.9e-20 Score=136.69 Aligned_cols=117 Identities=22% Similarity=0.358 Sum_probs=104.8
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-CCCHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-GMTGYD 94 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-~~~g~~ 94 (241)
.+||||||++..+..+...|...||.|..+.++.+|++.+.... ||+||+|+.|| +++|++
T Consensus 6 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~~~~~~------------------~dlvi~d~~~~~~~~g~~ 67 (127)
T 2gkg_A 6 KKILIVESDTALSATLRSALEGRGFTVDETTDGKGSVEQIRRDR------------------PDLVVLAVDLSAGQNGYL 67 (127)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHHTCEEEEECCHHHHHHHHHHHC------------------CSEEEEESBCGGGCBHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHhcCceEEEecCHHHHHHHHHhcC------------------CCEEEEeCCCCCCCCHHH
Confidence 68999999999999999999999999999999999999986544 55999999999 999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
+++.|+.....+++|||++ +..+......+++.|+++|+.||++.++|...+.+++
T Consensus 68 ~~~~l~~~~~~~~~~ii~~-~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~ 123 (127)
T 2gkg_A 68 ICGKLKKDDDLKNVPIVII-GNPDGFAQHRKLKAHADEYVAKPVDADQLVERAGALI 123 (127)
T ss_dssp HHHHHHHSTTTTTSCEEEE-ECGGGHHHHHHSTTCCSEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHhcCccccCCCEEEE-ecCCchhHHHHHHhCcchheeCCCCHHHHHHHHHHHH
Confidence 9999998744458999999 8878888889999999999999999999987766654
No 87
>3eqz_A Response regulator; structural genomics, unknown function, PSI-2, protein struct initiative; 2.15A {Colwellia psychrerythraea} SCOP: c.23.1.0
Probab=99.83 E-value=1.9e-20 Score=140.11 Aligned_cols=117 Identities=18% Similarity=0.263 Sum_probs=103.5
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
+.+||||||++..+..+..+|+..++.|..++++.+++..+.. . ||+||+|+.||+++|++
T Consensus 3 ~~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~~~~~~~~~~~~------------------~-~dlvi~D~~l~~~~g~~ 63 (135)
T 3eqz_A 3 LNRVFIVDDDTLTCNLLKTIVEPIFGNVEAFQHPRAFLTLSLN------------------K-QDIIILDLMMPDMDGIE 63 (135)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTTCSCEEEESCHHHHTTSCCC------------------T-TEEEEEECCTTTTHHHH
T ss_pred cceEEEEeCCHHHHHHHHHHHHhhcceeeeecCHHHHHHhhcc------------------C-CCEEEEeCCCCCCCHHH
Confidence 5799999999999999999999888899999999999887643 2 66999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCCh-----HHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVP-----SRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~-----~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+++.|++..+ .+|||++|+..+. .....++..|+++||.||++.++|...+.++..
T Consensus 64 ~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~~~~~~g~~~~l~KP~~~~~l~~~l~~~~~ 124 (135)
T 3eqz_A 64 VIRHLAEHKS--PASLILISGYDSGVLHSAETLALSCGLNVINTFTKPINTEVLTCFLTSLSN 124 (135)
T ss_dssp HHHHHHHTTC--CCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEEESSCCHHHHHHHHHHHSC
T ss_pred HHHHHHhCCC--CCCEEEEEeccchhHHHHHHHHHHcCCCcceeeCCCCCHHHHHHHHHHHHh
Confidence 9999998764 8999999998764 666778999999999999999999887776653
No 88
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=99.83 E-value=8.8e-20 Score=138.26 Aligned_cols=121 Identities=20% Similarity=0.358 Sum_probs=100.9
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcC-CCEE-EEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTS-SYQV-TTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~-g~~v-~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
....++||||||++..+..+..+|... ||.+ ..+.++.+|++.+.... ||+||+|+.||+
T Consensus 6 ~~~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~------------------~dlvi~d~~l~~ 67 (143)
T 2qv0_A 6 SGEKMKVIIVEDEFLAQQELSWLINTHSQMEIVGSFDDGLDVLKFLQHNK------------------VDAIFLDINIPS 67 (143)
T ss_dssp ----CEEEEECSCHHHHHHHHHHHHHHSCCEEEEEESCHHHHHHHHHHCC------------------CSEEEECSSCSS
T ss_pred CCCceEEEEEcCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCC------------------CCEEEEecCCCC
Confidence 345689999999999999999999875 7885 48999999999986544 559999999999
Q ss_pred CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 90 MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 90 ~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
++|+++++.|+...+ .+|||++|+.. +...++++.|+++||.||++.++|...+.+++..+
T Consensus 68 ~~g~~~~~~l~~~~~--~~~ii~~s~~~--~~~~~~~~~g~~~~l~KP~~~~~l~~~i~~~~~~~ 128 (143)
T 2qv0_A 68 LDGVLLAQNISQFAH--KPFIVFITAWK--EHAVEAFELEAFDYILKPYQESRIINMLQKLTTAW 128 (143)
T ss_dssp SCHHHHHHHHTTSTT--CCEEEEEESCC--TTHHHHHHTTCSEEEESSCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHccCC--CceEEEEeCCH--HHHHHHHhCCcceEEeCCCCHHHHHHHHHHHHHHH
Confidence 999999999998643 67889898874 35678999999999999999999988887776544
No 89
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=99.83 E-value=5.2e-20 Score=140.14 Aligned_cols=114 Identities=27% Similarity=0.418 Sum_probs=94.8
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcC-CCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTS-SYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
.....+||||||++..+..+..+|+.. ||.++ .+.++.+|++.+... ..||+||+|+.||+
T Consensus 10 ~~~~~~vlivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~-----------------~~~dlvilD~~l~~ 72 (145)
T 3kyj_B 10 HGSPYNVMIVDDAAMMRLYIASFIKTLPDFKVVAQAANGQEALDKLAAQ-----------------PNVDLILLDIEMPV 72 (145)
T ss_dssp -CCSEEEEEECSCHHHHHHHHHHHTTCTTEEEEEEESSHHHHHHHHHHC-----------------TTCCEEEECTTSCC
T ss_pred CCCCCeEEEEcCCHHHHHHHHHHHHhCCCceEEEEECCHHHHHHHHhcC-----------------CCCCEEEEeCCCCC
Confidence 456789999999999999999999988 88865 899999999998654 13569999999999
Q ss_pred CCHHHHHHHHHhcCCCCCCcEEEEcc--CCChHHHHHHHHhcccccccCCCCHHHHHH
Q 026239 90 MTGYDLLKKIKESSSLRDIPVVIMSS--ENVPSRISRCLEEGAEEFFLKPVRLSDLNK 145 (241)
Q Consensus 90 ~~g~~ll~~ir~~~~~~~ipvIils~--~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~ 145 (241)
++|+++++.|+... .+|+|++++ ..+.....++++.|+++||.||++..+|..
T Consensus 73 ~~g~~~~~~lr~~~---~~~iiil~~~~~~~~~~~~~~~~~ga~~~l~KP~~~~~l~~ 127 (145)
T 3kyj_B 73 MDGMEFLRHAKLKT---RAKICMLSSVAVSGSPHAARARELGADGVVAKPSGTVSHDL 127 (145)
T ss_dssp CTTCHHHHHHHHHC---CCEEC-CBSSCSTTSSHHHHHHHTTCSCCCBCCCSCC----
T ss_pred CCHHHHHHHHHhcC---CCCeEEEEEeccCChHHHHHHHhCCCCEEEeCCCCHHHHHH
Confidence 99999999999865 378999987 556667889999999999999999777643
No 90
>3c3w_A Two component transcriptional regulatory protein; response regulator, two-component regulatory system, DNA-BIN protein; 2.20A {Mycobacterium tuberculosis}
Probab=99.83 E-value=1.5e-20 Score=154.27 Aligned_cols=119 Identities=18% Similarity=0.268 Sum_probs=107.0
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCC-CEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSS-YQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g-~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
+++||||||++..+..+..+|...| |.++ .+.++.+|++.+.... ||+||+|+.||+++|
T Consensus 1 m~~ILivdd~~~~~~~l~~~L~~~~~~~vv~~~~~~~~al~~l~~~~------------------~dlvllD~~lp~~~g 62 (225)
T 3c3w_A 1 MVKVFLVDDHEVVRRGLVDLLGADPELDVVGEAGSVAEAMARVPAAR------------------PDVAVLDVRLPDGNG 62 (225)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHTCTTEEEEEEESSHHHHHHHHHHHC------------------CSEEEECSEETTEEH
T ss_pred CcEEEEEcCCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHHhhcC------------------CCEEEEeCCCCCCCH
Confidence 3789999999999999999999876 8854 7999999999986544 559999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
+++++.|+...+ .+|||++|+..+......+++.||++||.||++.++|...+..++.+
T Consensus 63 ~~~~~~lr~~~~--~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~i~~~~~~ 121 (225)
T 3c3w_A 63 IELCRDLLSRMP--DLRCLILTSYTSDEAMLDAILAGASGYVVKDIKGMELARAVKDVGAG 121 (225)
T ss_dssp HHHHHHHHHHCT--TCEEEEGGGSSSHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC--CCcEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHcC
Confidence 999999998754 89999999999999999999999999999999999998888777655
No 91
>2qsj_A DNA-binding response regulator, LUXR family; structural genomics, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi dss-3}
Probab=99.83 E-value=4.4e-20 Score=141.80 Aligned_cols=118 Identities=28% Similarity=0.325 Sum_probs=95.3
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcC-CC-EEEEECCHHHHHHHhcc-cCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTS-SY-QVTTVDSGSKALEFLGL-HEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~-g~-~v~~~~~~~~al~~l~~-~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
+++||||||++..+..+..+|... || .|..+.++.+|+..+.. . .||+||+|+.||+++
T Consensus 3 ~~~iLivdd~~~~~~~l~~~L~~~~g~~~v~~~~~~~~a~~~l~~~~------------------~~dlvi~d~~l~~~~ 64 (154)
T 2qsj_A 3 LTVVLIVDDHHLIRAGAKNLLEGAFSGMRVEGAETVSDALAFLEADN------------------TVDLILLDVNLPDAE 64 (154)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHHHCTTEEEEEESSHHHHHHHHHTTC------------------CCSEEEECC------
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCceEEEEecCHHHHHHHHhccC------------------CCCEEEEeCCCCCCc
Confidence 579999999999999999999987 88 67799999999999965 3 356999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
|+++++.|+...+ .+|||++|+..+......+++.|+++||.||++.++|...+..++.
T Consensus 65 g~~~~~~l~~~~~--~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kp~~~~~L~~~l~~~~~ 123 (154)
T 2qsj_A 65 AIDGLVRLKRFDP--SNAVALISGETDHELIRAALEAGADGFIPKSADPQVLIHAVSLILE 123 (154)
T ss_dssp CHHHHHHHHHHCT--TSEEEEC-----CHHHHHHHHTTCCBBCCTTSCHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHhCC--CCeEEEEeCCCCHHHHHHHHHccCCEEEeCCCCHHHHHHHHHHHHc
Confidence 9999999998754 8999999999888889999999999999999999999877766653
No 92
>2oqr_A Sensory transduction protein REGX3; response regulator, winged-helix-turn-helix, DNA-binding, 3D swapping, two component system; 2.03A {Mycobacterium tuberculosis H37RV}
Probab=99.83 E-value=7.6e-20 Score=149.78 Aligned_cols=117 Identities=25% Similarity=0.419 Sum_probs=106.3
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
++||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|+++
T Consensus 5 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~~~~~~------------------~dlvllD~~l~~~~g~~~ 66 (230)
T 2oqr_A 5 TSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAG------------------ADIVLLDLMLPGMSGTDV 66 (230)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHHHC------------------CSEEEEESSCSSSCHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHhccC------------------CCEEEEECCCCCCCHHHH
Confidence 68999999999999999999999999999999999999986544 559999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
++.|+.. + .+|||++|+..+......+++.||++||.||++.++|...+..++++
T Consensus 67 ~~~l~~~-~--~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~l~~~i~~~~~~ 121 (230)
T 2oqr_A 67 CKQLRAR-S--SVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRR 121 (230)
T ss_dssp HHHHHHH-C--SCSEEEEECCHHHHHHHHHHHHCCSCCCCSSCCHHHHHHHHHHHHTT
T ss_pred HHHHHcC-C--CCCEEEEeCCCcHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHhh
Confidence 9999985 3 79999999998888889999999999999999999998877776544
No 93
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=99.82 E-value=1.3e-19 Score=135.21 Aligned_cols=119 Identities=24% Similarity=0.329 Sum_probs=103.4
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC-CCH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG-MTG 92 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~-~~g 92 (241)
++++||||||++..+..+...|...||.|..+.++.+|++.+... ..||+||+|+.||+ ++|
T Consensus 4 ~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a~~~l~~~-----------------~~~dlvi~d~~l~~~~~g 66 (132)
T 2rdm_A 4 EAVTILLADDEAILLLDFESTLTDAGFLVTAVSSGAKAIEMLKSG-----------------AAIDGVVTDIRFCQPPDG 66 (132)
T ss_dssp SSCEEEEECSSHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHHTT-----------------CCCCEEEEESCCSSSSCH
T ss_pred CCceEEEEcCcHHHHHHHHHHHHHcCCEEEEECCHHHHHHHHHcC-----------------CCCCEEEEeeeCCCCCCH
Confidence 468999999999999999999999999999999999999998643 13569999999997 999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
+++++.|+...+ .+|||++|+..+......++..| +||.||++.++|...+.++...
T Consensus 67 ~~~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~~--~~l~kP~~~~~l~~~i~~~~~~ 123 (132)
T 2rdm_A 67 WQVARVAREIDP--NMPIVYISGHAALEWASNGVPDS--IILEKPFTSAQLITAVSQLLNA 123 (132)
T ss_dssp HHHHHHHHHHCT--TCCEEEEESSCCTTHHHHSCTTC--EEEESSCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhcCC--CCCEEEEeCCccHHHHHhhcCCc--ceEeCCCCHHHHHHHHHHHHhc
Confidence 999999998754 89999999988887777776665 7999999999998877666543
No 94
>1p2f_A Response regulator; DRRB, OMPR/PHOB, transcription; HET: MSE; 1.80A {Thermotoga maritima} SCOP: a.4.6.1 c.23.1.1 PDB: 3nns_A*
Probab=99.82 E-value=1.7e-19 Score=146.86 Aligned_cols=115 Identities=21% Similarity=0.334 Sum_probs=104.4
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
++||||||++..+..+..+|...| .|..+.++.+|++.+ .. ||+||+|+.||+++|+++
T Consensus 3 ~~ilivdd~~~~~~~l~~~L~~~~-~v~~~~~~~~al~~~--~~------------------~dlvllD~~lp~~~g~~~ 61 (220)
T 1p2f_A 3 WKIAVVDDDKNILKKVSEKLQQLG-RVKTFLTGEDFLNDE--EA------------------FHVVVLDVMLPDYSGYEI 61 (220)
T ss_dssp EEEEEECSCHHHHHHHHHHHTTTE-EEEEESSHHHHHHCC--SC------------------CSEEEEESBCSSSBHHHH
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCC-CEEEECCHHHHHHhc--CC------------------CCEEEEeCCCCCCCHHHH
Confidence 689999999999999999999888 888999999999866 33 559999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
++.|+...+ .+|||++|+..+......+++.||++||.||++.++|...+..++.+
T Consensus 62 ~~~lr~~~~--~~~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp~~~~~L~~~i~~~~~~ 117 (220)
T 1p2f_A 62 CRMIKETRP--ETWVILLTLLSDDESVLKGFEAGADDYVTKPFNPEILLARVKRFLER 117 (220)
T ss_dssp HHHHHHHCT--TSEEEEEESCCSHHHHHHHHHHTCSEEEESSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC--CCcEEEEEcCCCHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHHHcc
Confidence 999998754 89999999999999999999999999999999999998877776654
No 95
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=99.82 E-value=1.9e-19 Score=130.88 Aligned_cols=113 Identities=19% Similarity=0.250 Sum_probs=100.7
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
.+||||||++..+..+...|...||.|..+.++.+++..+.... ||+||+|+.+|+++|+++
T Consensus 2 ~~iliv~~~~~~~~~l~~~l~~~g~~v~~~~~~~~~~~~l~~~~------------------~dlii~d~~~~~~~~~~~ 63 (119)
T 2j48_A 2 GHILLLEEEDEAATVVCEMLTAAGFKVIWLVDGSTALDQLDLLQ------------------PIVILMAWPPPDQSCLLL 63 (119)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHHC------------------CSEEEEECSTTCCTHHHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHhCCcEEEEecCHHHHHHHHHhcC------------------CCEEEEecCCCCCCHHHH
Confidence 58999999999999999999999999999999999999986544 559999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPH 149 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~ 149 (241)
++.++.....+.+|||++|+..... .++..|+++|+.||++..+|...+..
T Consensus 64 ~~~l~~~~~~~~~~ii~~~~~~~~~---~~~~~g~~~~l~kp~~~~~l~~~l~~ 114 (119)
T 2j48_A 64 LQHLREHQADPHPPLVLFLGEPPVD---PLLTAQASAILSKPLDPQLLLTTLQG 114 (119)
T ss_dssp HHHHHHTCCCSSCCCEEEESSCCSS---HHHHHHCSEECSSCSTTHHHHHHHHT
T ss_pred HHHHHhccccCCCCEEEEeCCCCch---hhhhcCHHHhccCCCCHHHHHHHHHH
Confidence 9999987644589999999987665 88999999999999999998766544
No 96
>2gwr_A DNA-binding response regulator MTRA; two-component regulatory system, transcription regulation, phosphorylation, OMPR family; 2.10A {Mycobacterium tuberculosis} PDB: 3nhz_A
Probab=99.82 E-value=1.4e-19 Score=149.51 Aligned_cols=116 Identities=22% Similarity=0.472 Sum_probs=105.2
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
++||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|+++
T Consensus 6 ~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~------------------~dlvilD~~l~~~~g~~~ 67 (238)
T 2gwr_A 6 QRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELR------------------PDLVLLDLMLPGMNGIDV 67 (238)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHC------------------CSEEEEESSCSSSCHHHH
T ss_pred CeEEEEeCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHhCC------------------CCEEEEeCCCCCCCHHHH
Confidence 68999999999999999999999999999999999999986544 559999999999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
++.|+... .+|||++|+..+......+++.||++||.||++.++|...+..++.
T Consensus 68 ~~~lr~~~---~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~i~~~~~ 121 (238)
T 2gwr_A 68 CRVLRADS---GVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLR 121 (238)
T ss_dssp HHHHHTTC---CCCEEEEEETTCCSCHHHHHHTTCCEEEEESCCHHHHHHHHHHHCC
T ss_pred HHHHHhCC---CCcEEEEeCCCCHHHHHHHHHCCCCEEEeCCCCHHHHHHHHHHHHh
Confidence 99999753 7999999999888888999999999999999999999877766543
No 97
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=99.81 E-value=3.1e-19 Score=139.11 Aligned_cols=112 Identities=25% Similarity=0.353 Sum_probs=93.9
Q ss_pred hhcCcceEEEEeCCHHHHHHHHHHhhcCC-CE-EEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC
Q 026239 11 VAESQFHVLAVDDSIIDRKLIERLLKTSS-YQ-VTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP 88 (241)
Q Consensus 11 ~~~~~~~ILiVdd~~~~~~~l~~~L~~~g-~~-v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp 88 (241)
|...+++||||||++..+..+..+|...| +. +..+.++.+|++.+.... ||+||+|+.||
T Consensus 21 M~~~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~------------------~dlvilD~~l~ 82 (164)
T 3t8y_A 21 MTDRVIRVLVVDDSAFMRMVLKDIIDSQPDMKVVGFAKDGLEAVEKAIELK------------------PDVITMDIEMP 82 (164)
T ss_dssp ---CCEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHHHHC------------------CSEEEECSSCS
T ss_pred cccCccEEEEEcCCHHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHhccCC------------------CCEEEEeCCCC
Confidence 34567899999999999999999999875 44 447999999999996544 55999999999
Q ss_pred CCCHHHHHHHHHhcCCCCCCcEEEEccCCChH--HHHHHHHhcccccccCCCCHHHH
Q 026239 89 GMTGYDLLKKIKESSSLRDIPVVIMSSENVPS--RISRCLEEGAEEFFLKPVRLSDL 143 (241)
Q Consensus 89 ~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~--~~~~~l~~Ga~~~l~KP~~~~~L 143 (241)
+++|+++++.|+... .+|||++|+..+.. .+.++++.||++||.||++..+|
T Consensus 83 ~~~g~~l~~~lr~~~---~~~ii~~s~~~~~~~~~~~~~~~~ga~~~l~KP~~~~~l 136 (164)
T 3t8y_A 83 NLNGIEALKLIMKKA---PTRVIMVSSLTEEGAAITIEALRNGAVDFITKPHGSISL 136 (164)
T ss_dssp SSCHHHHHHHHHHHS---CCEEEEEESSCCTTCHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CCCHHHHHHHHHhcC---CceEEEEecCCccchHHHHHHHHcCcCEEEeCCCCHHHH
Confidence 999999999999875 37999999876543 67789999999999999996555
No 98
>3klo_A Transcriptional regulator VPST; REC domain, HTH domain, DNA-binding, transcription regulation; HET: C2E TAR; 2.80A {Vibrio cholerae} PDB: 3kln_A*
Probab=99.81 E-value=1.5e-20 Score=154.03 Aligned_cols=121 Identities=14% Similarity=0.093 Sum_probs=102.4
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhh-cCCCEEEE-ECCHHHHHHH-hcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLK-TSSYQVTT-VDSGSKALEF-LGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~-~~g~~v~~-~~~~~~al~~-l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
..+++||||||++..+..+..+|+ ..||.|.. +.++.+++.. +.. ..||+||+|+.||+
T Consensus 5 ~~~~~IlivdD~~~~~~~l~~~L~~~~~~~v~~~~~~~~~~~~~~~~~------------------~~~dlvllD~~mp~ 66 (225)
T 3klo_A 5 ENKLNVRMLSDVCMQSRLLKEALESKLPLALEITPFSELWLEENKPES------------------RSIQMLVIDYSRIS 66 (225)
T ss_dssp CSSEEEEEESCCSHHHHHHHHHHHHHSSEEEEEECGGGHHHHTTCSGG------------------GGCCEEEEEGGGCC
T ss_pred CCceEEEEEcCcHHHHHHHHHHHhhCCCceEEEEeCCcHHHHHHHhhc------------------cCCCEEEEeCCCCC
Confidence 456899999999999999999998 46888864 4566666553 433 34679999999999
Q ss_pred CCHHHHHHHHHh-cCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 90 MTGYDLLKKIKE-SSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 90 ~~g~~ll~~ir~-~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
++|+++++.|+. ..+ ++|||++|+..+......+++.||++||.||++.++|...+..++++
T Consensus 67 ~~G~~~~~~lr~~~~~--~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~L~~~i~~~~~~ 129 (225)
T 3klo_A 67 DDVLTDYSSFKHISCP--DAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIKGMSKILQD 129 (225)
T ss_dssp HHHHHHHHHHHHHHCT--TCEEEEEEECTTCCHHHHTTSTTEEEEEETTCCHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHhhCC--CCcEEEEECCcchhHHHHHHHhCCCEEEecCCCHHHHHHHHHHHHCC
Confidence 999999999998 554 89999999999888889999999999999999999998888777653
No 99
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=99.81 E-value=4.3e-19 Score=133.59 Aligned_cols=117 Identities=17% Similarity=0.308 Sum_probs=104.1
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
.....+||||||++..+..+..+|...||.|..+.++.+|+..+.... ||+|| ||+++
T Consensus 15 ~~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~------------------~dlvi----~~~~~ 72 (137)
T 2pln_A 15 PRGSMRVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRN------------------YDLVM----VSDKN 72 (137)
T ss_dssp CTTCSEEEEECSCHHHHHHHHHHHHHTTCEEEEESCHHHHHHHHHHSC------------------CSEEE----ECSTT
T ss_pred CCCCCeEEEEeCCHHHHHHHHHHHHHcCcEEEEeCCHHHHHHHHHcCC------------------CCEEE----EcCcc
Confidence 345689999999999999999999999999999999999999996544 45988 89999
Q ss_pred HHHHHHHHHhcCCCC-CCcEEEEccCCChHHHHHHHHhcccccccCCC-CHHHHHHhhHHHHHH
Q 026239 92 GYDLLKKIKESSSLR-DIPVVIMSSENVPSRISRCLEEGAEEFFLKPV-RLSDLNKLKPHLMKT 153 (241)
Q Consensus 92 g~~ll~~ir~~~~~~-~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~-~~~~L~~~~~~l~~~ 153 (241)
|+++++.|+.. + .+|||++|+..+......+++.|+++||.||+ +.++|...+..++.+
T Consensus 73 g~~~~~~l~~~---~~~~~ii~ls~~~~~~~~~~~~~~g~~~~l~kP~~~~~~l~~~i~~~~~~ 133 (137)
T 2pln_A 73 ALSFVSRIKEK---HSSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRF 133 (137)
T ss_dssp HHHHHHHHHHH---STTSEEEEEESSCCHHHHHHHHHTTCSEEEESSCSCHHHHHHHHHHHTC-
T ss_pred HHHHHHHHHhc---CCCccEEEEeCCCCHHHHHHHHHcCCceeeeCCCCCHHHHHHHHHHHHhh
Confidence 99999999986 4 79999999999999999999999999999999 999998777666543
No 100
>1dc7_A NTRC, nitrogen regulation protein; receiver domain, phosphorylation, signal transduction, conformational rearrangement; NMR {Salmonella typhimurium} SCOP: c.23.1.1 PDB: 1j56_A 1krw_A 1krx_A 1ntr_A 1dc8_A*
Probab=99.81 E-value=3.5e-21 Score=141.92 Aligned_cols=118 Identities=28% Similarity=0.435 Sum_probs=105.0
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
..+||||||++..+..+...|...||.|..+.++.+++..+... .||+||+|+.||+++|++
T Consensus 3 ~~~ilivdd~~~~~~~l~~~l~~~~~~v~~~~~~~~~~~~~~~~------------------~~dlvi~d~~~~~~~g~~ 64 (124)
T 1dc7_A 3 RGIVWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLAALASK------------------TPDVLLSDIRMPGMDGLA 64 (124)
T ss_dssp CCCCEEECSSSSHHHHHHHHHTTTTCCCEECCCTTHHHHHSSSC------------------CCSCEEECSCSSHHHHCS
T ss_pred ccEEEEEeCCHHHHHHHHHHHHhCCcEEEEeCCHHHHHHHHhcC------------------CCCEEEEeeecCCCCHHH
Confidence 46899999999999999999998899999999999999988543 356999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+++.|+...+ .+|||++|+..+......+++.|+++|+.||++.++|...+..++.
T Consensus 65 ~~~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~g~~~~l~kp~~~~~l~~~i~~~~~ 120 (124)
T 1dc7_A 65 LLKQIKQRHP--MLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAIS 120 (124)
T ss_dssp THHHHHHHCT--TSCCCCBCCSTTSTTTTSSCTTCCCCCBCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhCC--CCCEEEEecCCCHHHHHHHHhcCcceEeeCCCCHHHHHHHHHHHHH
Confidence 9999998654 8999999998888888889999999999999999999877766553
No 101
>1qo0_D AMIR; binding protein, gene regulator, receptor; 2.25A {Pseudomonas aeruginosa} SCOP: c.23.1.3
Probab=99.81 E-value=2.5e-19 Score=143.48 Aligned_cols=117 Identities=11% Similarity=0.073 Sum_probs=100.9
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
...++||||||++..+..+..+|...||.|..+.++.+++ .. .||+||+|+.||+++|
T Consensus 10 ~~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al----~~------------------~~dlvl~D~~mp~~~g 67 (196)
T 1qo0_D 10 LRELQVLVLNPPGEVSDALVLQLIRIGCSVRQCWPPPEAF----DV------------------PVDVVFTSIFQNRHHD 67 (196)
T ss_dssp GGGCEEEEESCTTHHHHHHHHHHHHHTCEEEEECSCCSSC----SS------------------CCSEEEEECCSSTHHH
T ss_pred hcCCeEEEEcCChhHHHHHHHHHHHcCCeEEEecCchhhC----CC------------------CCCEEEEeCCCCccch
Confidence 3468999999999999999999998899999887776654 11 3669999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKTK 154 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~~ 154 (241)
+ +++.++... +++|||++|+..+.+.+..+++.|+++||.||++..+|...+..++...
T Consensus 68 ~-l~~~~~~~~--~~~~ii~lt~~~~~~~~~~a~~~ga~~~l~KP~~~~~L~~~l~~~~~~~ 126 (196)
T 1qo0_D 68 E-IAALLAAGT--PRTTLVALVEYESPAVLSQIIELECHGVITQPLDAHRVLPVLVSARRIS 126 (196)
T ss_dssp H-HHHHHHHSC--TTCEEEEEECCCSHHHHHHHHHHTCSEEEESSCCGGGHHHHHHHHHHHH
T ss_pred H-HHHHHhccC--CCCCEEEEEcCCChHHHHHHHHcCCCeeEecCcCHHHHHHHHHHHHHHH
Confidence 9 999998764 4899999999999999999999999999999999999987776665443
No 102
>3c97_A Signal transduction histidine kinase; structural genomics, signaling, PSI-2, protein structure initiative; 1.70A {Aspergillus oryzae RIB40}
Probab=99.80 E-value=2.2e-19 Score=135.88 Aligned_cols=118 Identities=19% Similarity=0.345 Sum_probs=98.8
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
.++||||||++..+..+..+|...||.|..+.++.+|++.+.... ||+||+|+.||+++|++
T Consensus 10 ~~~iLivdd~~~~~~~l~~~L~~~~~~v~~~~~~~~al~~l~~~~------------------~dlvllD~~lp~~~g~~ 71 (140)
T 3c97_A 10 PLSVLIAEDNDICRLVAAKALEKCTNDITVVTNGLQALQAYQNRQ------------------FDVIIMDIQMPVMDGLE 71 (140)
T ss_dssp CCEEEEECCCHHHHHHHHHHHTTTCSEEEEESSHHHHHHHHHHSC------------------CSEEEECTTCCSSCHHH
T ss_pred CceEEEEcCCHHHHHHHHHHHHHcCCceEEECCHHHHHHHHhcCC------------------CCEEEEeCCCCCCcHHH
Confidence 368999999999999999999998999999999999999986544 55999999999999999
Q ss_pred HHHHHHhcC---CCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 95 LLKKIKESS---SLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 95 ll~~ir~~~---~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
+++.|++.. ..+.+|||++|+........ ..|+++||.||++.++|...+..++.+
T Consensus 72 ~~~~l~~~~~~~~~~~~~ii~~s~~~~~~~~~---~~g~~~~l~KP~~~~~L~~~i~~~~~~ 130 (140)
T 3c97_A 72 AVSEIRNYERTHNTKRASIIAITADTIDDDRP---GAELDEYVSKPLNPNQLRDVVLTCHSE 130 (140)
T ss_dssp HHHHHHHHHHHHTCCCCCCEEEESSCCSCCCC---CSSCSEEEESSCCHHHHHHHHHHHHC-
T ss_pred HHHHHHhhhhhcCCCceEEEEEeCccchhHHH---hCChhheEeCCCCHHHHHHHHHHHhCC
Confidence 999999742 12478999999865544322 689999999999999998877766543
No 103
>3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa}
Probab=99.80 E-value=1.8e-19 Score=160.25 Aligned_cols=119 Identities=22% Similarity=0.271 Sum_probs=102.1
Q ss_pred cceEEEEeCCHHHHHHHHHHhhc-CCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKT-SSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~-~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
+++||||||++..+..+..+|+. .||.|..+.++.+|++.+... ..||+||+|+.||+|+|+
T Consensus 3 ~~~ILivDD~~~~~~~l~~~L~~~~~~~v~~a~~g~eal~~l~~~-----------------~~~DlvllDi~mP~~dG~ 65 (400)
T 3sy8_A 3 DLNVLVLEDEPFQRLVAVTALKKVVPGSILEAADGKEAVAILESC-----------------GHVDIAICDLQMSGMDGL 65 (400)
T ss_dssp CEEEEEECSSHHHHHHHHHHHHHHCSEEEEEESSHHHHHHHHHHH-----------------SCEEEEEECSSCSSSCHH
T ss_pred CceEEEEcCCHHHHHHHHHHHHhcCCcEEEEecCHHHHHHHHhhC-----------------CCCCEEEEeCCCCCCCHH
Confidence 47999999999999999999987 678999999999999998642 236699999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCCh-----HHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVP-----SRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~-----~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+++++|+...+ .+|||++|+.... ....+++..||++||.||++.++|...+..++.
T Consensus 66 ell~~l~~~~~--~~~ii~~s~~~~~~~~~~~~~~~a~~~ga~~yl~KP~~~~~L~~~i~~~~~ 127 (400)
T 3sy8_A 66 AFLRHASLSGK--VHSVILSSEVDPILRQATISMIECLGLNFLGDLGKPFSLERITALLTRYNA 127 (400)
T ss_dssp HHHHHHHHHTC--EEEEEESCCCCGGGHHHHHHHHHTTTCEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCC--CceEEEEcCchHHHHHHHHHHHHHcCCeeccCcCCCcCHHHHHHHHHHHHH
Confidence 99999998764 6677777776655 567788999999999999999999887776643
No 104
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=99.78 E-value=6.9e-19 Score=132.63 Aligned_cols=116 Identities=22% Similarity=0.253 Sum_probs=97.8
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcc-cCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGL-HEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~-~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
..+..+||||||++..+..+..+|...||.|..+.++.+|++.+.. .. ||+||+|+.||++
T Consensus 12 ~~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~------------------~dlvilD~~l~~~ 73 (138)
T 2b4a_A 12 HMQPFRVTLVEDEPSHATLIQYHLNQLGAEVTVHPSGSAFFQHRSQLST------------------CDLLIVSDQLVDL 73 (138)
T ss_dssp --CCCEEEEECSCHHHHHHHHHHHHHTTCEEEEESSHHHHHHTGGGGGS------------------CSEEEEETTCTTS
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHHHcCCEEEEeCCHHHHHHHHHhCCC------------------CCEEEEeCCCCCC
Confidence 4457899999999999999999999999999999999999998864 43 5699999999999
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEc-cCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMS-SENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils-~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
+|+++++.|+... +.+|||++| +..+... ..++ +++||.||++.++|...+..++
T Consensus 74 ~g~~~~~~l~~~~--~~~~ii~ls~~~~~~~~-~~~~---~~~~l~KP~~~~~L~~~i~~~~ 129 (138)
T 2b4a_A 74 SIFSLLDIVKEQT--KQPSVLILTTGRHELIE-SSEH---NLSYLQKPFAISELRAAIDYHK 129 (138)
T ss_dssp CHHHHHHHHTTSS--SCCEEEEEESCC--CCC-CSSS---CEEEEESSCCHHHHHHHHHHTC
T ss_pred CHHHHHHHHHhhC--CCCCEEEEECCCCCHHH-HHHH---HHheeeCCCCHHHHHHHHHHHH
Confidence 9999999999854 489999999 8766555 5555 9999999999999977666543
No 105
>2hqr_A Putative transcriptional regulator; phosporylation-independent response regulator, H. pylori, SY dimer, signaling protein; NMR {Helicobacter pylori}
Probab=99.77 E-value=3.3e-18 Score=139.46 Aligned_cols=114 Identities=18% Similarity=0.310 Sum_probs=102.6
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
++||||||++..+..+..+|...||.|..+.++.+|+..+.... ||+|| ||+++|+++
T Consensus 1 m~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~------------------~dlvi----lp~~~g~~~ 58 (223)
T 2hqr_A 1 MRVLLIEKNSVLGGEIEKGLNVKGFMADVTESLEDGEYLMDIRN------------------YDLVM----VSDKNALSF 58 (223)
T ss_dssp CCEEEECSCHHHHHHHHHHHGGGTCCEEEESSHHHHHHHHTTSC------------------CSEEE----ECCTTHHHH
T ss_pred CEEEEEcCCHHHHHHHHHHHHHCCcEEEEECCHHHHHHHHhcCC------------------CCEEE----eCCCCHHHH
Confidence 47999999999999999999999999999999999999996544 55998 999999999
Q ss_pred HHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCC-CHHHHHHhhHHHHHH
Q 026239 96 LKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPV-RLSDLNKLKPHLMKT 153 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~-~~~~L~~~~~~l~~~ 153 (241)
++.|+.. + .++|||++|+..+......+++.||++||.||+ +.++|...+..++++
T Consensus 59 ~~~lr~~-~-~~~~ii~lt~~~~~~~~~~~~~~Ga~~~l~Kp~~~~~~L~~~i~~~~~~ 115 (223)
T 2hqr_A 59 VSRIKEK-H-SSIVVLVSSDNPTSEEEVHAFEQGADDYIAKPYRSIKALVARIEARLRF 115 (223)
T ss_dssp HHHHHHH-C-TTSEEEEEESSCCHHHHHHHHHHTCSEEEETTCSCTHHHHHHHHHHTSS
T ss_pred HHHHHhC-C-CCCcEEEEECCCCHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHHhcc
Confidence 9999987 2 379999999999999999999999999999999 999998877776544
No 106
>1a2o_A CHEB methylesterase; bacterial chemotaxis, adaptation, serine hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.23.1.1 c.40.1.1
Probab=99.74 E-value=2.1e-17 Score=144.51 Aligned_cols=105 Identities=30% Similarity=0.426 Sum_probs=92.6
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcC-CCE-EEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTS-SYQ-VTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~-g~~-v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
+++||||||++..+..+..+|... ||. |..+.++.+|++.+.... ||+||+|+.||+++|
T Consensus 3 ~~rVLIVDD~~~~r~~L~~~L~~~~g~~vv~~a~~~~eAl~~l~~~~------------------pDlVllDi~mp~~dG 64 (349)
T 1a2o_A 3 KIRVLSVDDSALMRQIMTEIINSHSDMEMVATAPDPLVARDLIKKFN------------------PDVLTLDVEMPRMDG 64 (349)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHHHHC------------------CSEEEEECCCSSSCH
T ss_pred CCEEEEEECCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHhccC------------------CCEEEEECCCCCCCH
Confidence 589999999999999999999986 898 558999999999996544 459999999999999
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCCh--HHHHHHHHhcccccccCCCCH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVP--SRISRCLEEGAEEFFLKPVRL 140 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~--~~~~~~l~~Ga~~~l~KP~~~ 140 (241)
+++++.|+... .+|||++|+..+. +...++++.||++||.||++.
T Consensus 65 lell~~l~~~~---p~pVIvlS~~~~~~~~~~~~al~~Ga~d~l~KP~~~ 111 (349)
T 1a2o_A 65 LDFLEKLMRLR---PMPVVMVSSLTGKGSEVTLRALELGAIDFVTKPQLG 111 (349)
T ss_dssp HHHHHHHHHSS---CCCEEEEECCTHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred HHHHHHHHhcC---CCcEEEEECCCcccHHHHHHHHhCCceEEEECCCCc
Confidence 99999999864 3899999987765 447889999999999999983
No 107
>3luf_A Two-component system response regulator/ggdef domain protein; structural genomics, ASA_2441, PSI-2, protein structure initiative; HET: MSE; 1.76A {Aeromonas salmonicida} PDB: 3mf4_A*
Probab=99.73 E-value=8e-18 Score=141.20 Aligned_cols=104 Identities=18% Similarity=0.330 Sum_probs=85.9
Q ss_pred cceEEEEeCCHHHHHHHHHHhhc-CCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKT-SSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~-~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
+.+||||||++..+..+...|.. .||.+..+ ++.+++..+. ...||+||+|+.||+++|+
T Consensus 4 ~~~ILiVdD~~~~~~~l~~~L~~~~~~~v~~~-~~~~~~~~~~------------------~~~~dlvllD~~mP~~~G~ 64 (259)
T 3luf_A 4 KQKILIVEDSMTIRRMLIQAIAQQTGLEIDAF-DTLEGARHCQ------------------GDEYVVALVDLTLPDAPSG 64 (259)
T ss_dssp CCEEEEECCCHHHHHHHHHHHHHHHCCEEEEE-SSTGGGTTCC------------------TTTEEEEEEESCBTTBTTS
T ss_pred CCeEEEEECCHHHHHHHHHHHHhcCCeEEEEe-ChHHHHHHhh------------------cCCCcEEEEeCCCCCCCHH
Confidence 36899999999999999999975 47777655 4445544432 2357899999999999999
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLS 141 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~ 141 (241)
+++++|+.. .+|||++|+..+.+...+++++||++||.||+...
T Consensus 65 ~~~~~lr~~----~~pvi~lt~~~~~~~~~~a~~~Ga~dyl~Kp~~~~ 108 (259)
T 3luf_A 65 EAVKVLLER----GLPVVILTADISEDKREAWLEAGVLDYVMKDSRHS 108 (259)
T ss_dssp HHHHHHHHT----TCCEEEEECC-CHHHHHHHHHTTCCEEEECSSHHH
T ss_pred HHHHHHHhC----CCCEEEEEccCCHHHHHHHHHCCCcEEEeCCchhH
Confidence 999999973 58999999999999999999999999999997543
No 108
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.70 E-value=2e-17 Score=157.76 Aligned_cols=119 Identities=18% Similarity=0.231 Sum_probs=102.8
Q ss_pred ceEEEEeCCH-HH-------HHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC
Q 026239 16 FHVLAVDDSI-ID-------RKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM 87 (241)
Q Consensus 16 ~~ILiVdd~~-~~-------~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m 87 (241)
++||||||+. .. +..|...|+..||.|..+.++.+|+..+... ..+|+||+|+.|
T Consensus 1 m~ILiVdDd~~~~~~~~~~~~~~L~~~L~~~g~~v~~a~~g~~al~~~~~~-----------------~~~d~vilDi~l 63 (755)
T 2vyc_A 1 MKVLIVESEFLHQDTWVGNAVERLADALSQQNVTVIKSTSFDDGFAILSSN-----------------EAIDCLMFSYQM 63 (755)
T ss_dssp CEEEEECCTTSTTSHHHHHHHHHHHHHHHHTTCEEEEESSHHHHHHHHTTT-----------------CCCSEEEEECCC
T ss_pred CeEEEEeCCccccccccHHHHHHHHHHHHhCCCEEEEECCHHHHHHHHhcC-----------------CCCcEEEEeCCC
Confidence 4899999999 88 9999999999999999999999999998532 236799999999
Q ss_pred CC----CCHHHHHHHHHhcCCCCCCcEEEEccCCC-hHHHHHHHHhcccccccCCCCHHH-HHHhhHHHHHH
Q 026239 88 PG----MTGYDLLKKIKESSSLRDIPVVIMSSENV-PSRISRCLEEGAEEFFLKPVRLSD-LNKLKPHLMKT 153 (241)
Q Consensus 88 p~----~~g~~ll~~ir~~~~~~~ipvIils~~~~-~~~~~~~l~~Ga~~~l~KP~~~~~-L~~~~~~l~~~ 153 (241)
|+ ++|+++|++||+... ++|||++|+... .+.....+..||+||+.||++..+ |..-+..++++
T Consensus 64 p~~~~~~~G~~ll~~iR~~~~--~iPIi~lTa~~~~~~d~~~~l~~gaddyi~kpf~~~efl~~ri~a~~rr 133 (755)
T 2vyc_A 64 EHPDEHQNVRQLIGKLHERQQ--NVPVFLLGDREKALAAMDRDLLELVDEFAWILEDTADFIAGRAVAAMTR 133 (755)
T ss_dssp CSHHHHHHHHHHHHHHHHHST--TCCEEEEECHHHHHHTCSHHHHHHCSEEEETTTSCHHHHHHHHHHHHHH
T ss_pred CcccccccHHHHHHHHHHhCC--CCCEEEEecCCcchhhccHhHhhcCCceEeCCCCCHHHHHHHHHHHHHH
Confidence 99 999999999999764 799999999776 666778899999999999999999 65444444444
No 109
>1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=99.28 E-value=1.1e-10 Score=104.80 Aligned_cols=117 Identities=20% Similarity=0.252 Sum_probs=96.7
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
..+|++|||+...+..+...|.. .+.+....++.+++. ... ..+|+|++|+.||+|+|++
T Consensus 152 ~~~ilivdd~~~~~~~i~~~L~~-~~~~~~~~~~~~~~~-~~~------------------~~~dlil~D~~mp~~dG~~ 211 (459)
T 1w25_A 152 GGRVLIVDDNERQAQRVAAELGV-EHRPVIESDPEKAKI-SAG------------------GPVDLVIVNAAAKNFDGLR 211 (459)
T ss_dssp SCEEEEECSCHHHHHHHHHHHTT-TSEEEEECCHHHHHH-HHH------------------SSCSEEEEETTCSSSCHHH
T ss_pred CCeEEEECCchhhHHHHHHHHhc-ccceeeccCHHHHhh-hcc------------------CCCCEEEEecCCCCCcHHH
Confidence 46899999999888888888865 466777788888753 222 2356999999999999999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
+++.++.......+||+++|+.........+++.|+++|+.||+...++...+..+.
T Consensus 212 ~~~~ir~~~~~~~~pii~lt~~~~~~~~~~~l~~Ga~d~~~kp~~~~~l~~~v~~~~ 268 (459)
T 1w25_A 212 FTAALRSEERTRQLPVLAMVDPDDRGRMVKALEIGVNDILSRPIDPQELSARVKTQI 268 (459)
T ss_dssp HHHHHHTSGGGTTCCEEEEECTTCHHHHHHHHHTTCCEEEESSCCHHHHHHHHHHHH
T ss_pred HHHHHHhCccccCCcEEEEcCCCchHHHHHHHhccccccccCCCCHHHHHHHHHHHH
Confidence 999999876666899999999999988999999999999999999998865544443
No 110
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=99.23 E-value=7e-12 Score=102.26 Aligned_cols=87 Identities=22% Similarity=0.364 Sum_probs=70.0
Q ss_pred CCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCC
Q 026239 39 SYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENV 118 (241)
Q Consensus 39 g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~ 118 (241)
.+.|..+.++.+|++.+.... ||+||+|+.||+++|+++++.|++..+ ..++++++....
T Consensus 5 v~~v~~~~~~~~a~~~~~~~~------------------~dlvl~D~~~p~~~g~~~~~~l~~~~~--~~~i~vi~~~~~ 64 (237)
T 3cwo_X 5 VLIVDDATNGREAVEKYKELK------------------PDIVTMDITMPEMNGIDAIKEIMKIDP--NAKIIVCSAMGQ 64 (237)
T ss_dssp EEEEECCCSSSTTHHHHHHHC------------------CSCEEEECCSTTSSHHHHHHHHHHHSS--SCCEEEECCSST
T ss_pred EEEEEECCCHHHHHHHHHhcC------------------CCEEEEeCCCCCCCHHHHHHHHHHhCC--CCCEEEEECCCC
Confidence 355667889999999986544 559999999999999999999998654 455666666666
Q ss_pred hHHHHHHHHhcccccccCC--CCHHHHHH
Q 026239 119 PSRISRCLEEGAEEFFLKP--VRLSDLNK 145 (241)
Q Consensus 119 ~~~~~~~l~~Ga~~~l~KP--~~~~~L~~ 145 (241)
.+....+++.|+++|+.|| ++..++..
T Consensus 65 ~~~~~~~~~~Ga~~~l~kp~~~~~~~l~~ 93 (237)
T 3cwo_X 65 QAMVIEAIKAGAKDFIVNTAAVENPSLIT 93 (237)
T ss_dssp HHHHHHHHHTTCCEEEESHHHHHCTHHHH
T ss_pred HHHHHHHHHCCHHheEeCCcccChHHHHH
Confidence 8888999999999999999 66666544
No 111
>3q7r_A Transcriptional regulatory protein; CHXR, receiver domain, transcription factor, OMPR, chlamydia transcription; 1.60A {Chlamydia trachomatis} PDB: 3q7s_A* 3q7t_A
Probab=97.89 E-value=6.8e-05 Score=52.36 Aligned_cols=107 Identities=20% Similarity=0.231 Sum_probs=81.3
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
...+||+|..|....-.++.++....|.+++..... .+...|+|+|.|.+-..+
T Consensus 11 ~~~~iL~VtEd~~ls~QlKel~~~~eY~~~is~~~~------------------------~e~~AdlIfCEYlLLPe~-- 64 (121)
T 3q7r_A 11 GPKHVLLVSEHWDLFFQTKELLNPEEYRCTIGQQYK------------------------QELSADLVVCEYSLLPRE-- 64 (121)
T ss_dssp CCEEEEEECSCHHHHHHHHHHSCTTTEEEEEESSCC------------------------CCTTEEEEEEEGGGSCTT--
T ss_pred CCcEEEEEecCchhhHHHHHhcCCcceeEEeccccC------------------------CcccceeEEEeeecChHH--
Confidence 346789999888888889999988889988764321 344568999999764322
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
|.........-+|++-..-+.+.+.+.++.||. |++.|+.+.-|..+++..++
T Consensus 65 -----ifS~k~~~~~dliVLfD~F~EEa~v~vLd~Ga~-yLlrPIT~kvldAvIraFLr 117 (121)
T 3q7r_A 65 -----IRSPKSLEGSFVLVLLDFFDEETSVDLLDRGFW-YLIRPITPRILKSAISLFLS 117 (121)
T ss_dssp -----CCCCTTCCSCEEEEEESSCCHHHHHHHHHTTCE-EEESCCCHHHHHHHHHHHHH
T ss_pred -----hcCCCCCCcccEEEEehhhchHHHHHHHhCCce-eEeccCcHHHHHHHHHHHHh
Confidence 333333445678888888889999999999999 99999999888777776654
No 112
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=97.85 E-value=1.7e-05 Score=75.11 Aligned_cols=93 Identities=14% Similarity=0.174 Sum_probs=71.6
Q ss_pred HHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHHHhcCCCCCC
Q 026239 29 KLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKIKESSSLRDI 108 (241)
Q Consensus 29 ~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~i 108 (241)
..|...|+..||+|..+.++.+|+.++.. +..+++||+|+.++ +.+++++||.... ++
T Consensus 20 ~~L~~~Le~~g~~V~~a~s~~Da~~~i~~-----------------~~~i~avIld~d~~---~~~ll~~Ir~~~~--~i 77 (715)
T 3n75_A 20 RELHRALERLNFQIVYPNDRDDLLKLIEN-----------------NARLCGVIFDWDKY---NLELCEEISKMNE--NL 77 (715)
T ss_dssp HHHHHHHHHTTCEEECCSSHHHHHHHHHH-----------------CTTEEEEEEEHHHH---HHHHHHHHHHHCT--TC
T ss_pred HHHHHHHHHCCcEEEEeCCHHHHHHHHHh-----------------CCCceEEEEecccc---HHHHHHHHHHhCC--CC
Confidence 34557788899999999999999999964 23478999999885 7899999999875 99
Q ss_pred cEEEEccCCChHHHHHHHHhcccccccCCCCHHHH
Q 026239 109 PVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDL 143 (241)
Q Consensus 109 pvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L 143 (241)
||++++.......+....-.++++|+.+..+..++
T Consensus 78 PVFl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (715)
T 3n75_A 78 PLYAFANTYSTLDVSLNDLRLQISFFEYALGAAED 112 (715)
T ss_dssp EEEEECCTTCCCCGGGTTSCCEEEEECCCTTCHHH
T ss_pred CEEEEecCCcccccchhhhhccCeEEEeCCCCHHH
Confidence 99999987543322211235788999998765554
No 113
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=97.57 E-value=0.0002 Score=58.97 Aligned_cols=95 Identities=18% Similarity=0.131 Sum_probs=65.9
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
-...+||||||+...+..+...|..+|+.|..+.+. . ...+|+||+|+.+|+..+
T Consensus 9 l~~~~vlvv~d~~~~~~~l~~~L~~~g~~v~~~~~~-------~------------------~~~~~~ii~d~~~~~~~~ 63 (254)
T 2ayx_A 9 LSGKRCWLAVRNASLCQFLETSLQRSGIVVTTYEGQ-------E------------------PTPEDVLITDEVVSKKWQ 63 (254)
T ss_dssp TTTEEEEEECCCHHHHHHHHHHHTTTTEEEEECSSC-------C------------------CCTTCEEEEESSCSCCCC
T ss_pred cCCCEEEEEcCCHHHHHHHHHHHHHCCCEEEEecCC-------C------------------CCcCcEEEEcCCCccccc
Confidence 346899999999999999999999999999887640 1 124679999999987543
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHL 150 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l 150 (241)
...++.++....... ...+...|+.+|+....+..++.++
T Consensus 64 --------------~~~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~l~~~ 103 (254)
T 2ayx_A 64 --------------GRAVVTFCRRHIGIP----LEKAPGEWVHSVAAPHELPALLARI 103 (254)
T ss_dssp --------------SSEEEEECSSCCCSC----CTTSTTEEEECSSCCSHHHHHHHHH
T ss_pred --------------cceEEEEecccCCCc----ccccCCceeccccchHHHHHHHHHH
Confidence 113555655432110 1234457889999887776555443
No 114
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=97.54 E-value=0.0019 Score=49.64 Aligned_cols=120 Identities=18% Similarity=0.241 Sum_probs=81.0
Q ss_pred CcceEEEE----eCCHHHHHHHHHHhhcCCCEEEEE---CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC
Q 026239 14 SQFHVLAV----DDSIIDRKLIERLLKTSSYQVTTV---DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC 86 (241)
Q Consensus 14 ~~~~ILiV----dd~~~~~~~l~~~L~~~g~~v~~~---~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~ 86 (241)
...+|++. |.+..-...+..+|+..||+|... .+.++.++.+....+ |+|.+...
T Consensus 17 ~~~~vlla~~~gd~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~------------------diV~lS~~ 78 (161)
T 2yxb_A 17 RRYKVLVAKMGLDGHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDV------------------DVIGVSIL 78 (161)
T ss_dssp CSCEEEEEEESSSSCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTC------------------SEEEEEES
T ss_pred CCCEEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCC------------------CEEEEEee
Confidence 45778877 777788888999999999999853 467788888865544 48888776
Q ss_pred CCC-C-CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 87 MPG-M-TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 87 mp~-~-~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
+.. + .-.++++.|++... ++++|++ .+.........+.+.|+++++..-.+..+....+..++..
T Consensus 79 ~~~~~~~~~~~i~~L~~~g~-~~i~v~v-GG~~~~~~~~~l~~~G~d~v~~~~~~~~~~~~~~~~~~~~ 145 (161)
T 2yxb_A 79 NGAHLHLMKRLMAKLRELGA-DDIPVVL-GGTIPIPDLEPLRSLGIREIFLPGTSLGEIIEKVRKLAEE 145 (161)
T ss_dssp SSCHHHHHHHHHHHHHHTTC-TTSCEEE-EECCCHHHHHHHHHTTCCEEECTTCCHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHhcCC-CCCEEEE-eCCCchhcHHHHHHCCCcEEECCCCCHHHHHHHHHHHHHH
Confidence 653 1 23456777877543 3677665 4555555555567899998676555555555555555443
No 115
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=96.85 E-value=0.0016 Score=52.13 Aligned_cols=64 Identities=11% Similarity=0.344 Sum_probs=50.4
Q ss_pred cEEEEeC-CCCCCCHH--HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc------ccCCCCHHHHHH
Q 026239 79 NLVITDY-CMPGMTGY--DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF------FLKPVRLSDLNK 145 (241)
Q Consensus 79 dlIilD~-~mp~~~g~--~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~------l~KP~~~~~L~~ 145 (241)
+++++++ .++.++|+ ++++.++.. .++|||++++...++...++++.|++++ ..+|++..++.+
T Consensus 146 ~vli~~~~~~g~~~g~~~~~i~~~~~~---~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~a~~~~~~~~~~~~~ 218 (237)
T 3cwo_X 146 EILLTSIDRDGTKSGYDTEMIRFVRPL---TTLPIIASGGAGKMEHFLEAFLAGADAALAASVFHFREIDVRELKE 218 (237)
T ss_dssp EEEEEETTTTTCCSCCCHHHHHHHGGG---CCSCEEEESCCCSHHHHHHHHHHTCSEEEESHHHHTTSSCHHHHHH
T ss_pred eEEEEecCCCCccccccHHHHHHHHHh---cCCCEEecCCCCCHHHHHHHHHcCcHHHhhhHHHHcCCCCHHHHHH
Confidence 4888886 55556664 466666654 3799999999999999999999999998 378988887754
No 116
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=95.88 E-value=0.07 Score=43.89 Aligned_cols=87 Identities=18% Similarity=0.155 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhhcCCCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC-----CCHHHHHH
Q 026239 25 IIDRKLIERLLKTSSYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG-----MTGYDLLK 97 (241)
Q Consensus 25 ~~~~~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~-----~~g~~ll~ 97 (241)
....+.. +.|...||.|. +++|...|..+.. .. +++| +.+..|- ...+++++
T Consensus 122 ~~tv~aa-~~L~~~Gf~Vlpy~~dd~~~akrl~~-~G------------------~~aV-mPlg~pIGsG~Gi~~~~lI~ 180 (265)
T 1wv2_A 122 VETLKAA-EQLVKDGFDVMVYTSDDPIIARQLAE-IG------------------CIAV-MPLAGLIGSGLGICNPYNLR 180 (265)
T ss_dssp HHHHHHH-HHHHTTTCEEEEEECSCHHHHHHHHH-SC------------------CSEE-EECSSSTTCCCCCSCHHHHH
T ss_pred HHHHHHH-HHHHHCCCEEEEEeCCCHHHHHHHHH-hC------------------CCEE-EeCCccCCCCCCcCCHHHHH
Confidence 3333433 44556799877 4566665554432 22 3354 5655542 23478999
Q ss_pred HHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 98 KIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 98 ~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.|++.. ++|||+=.+-..++.+..+++.||++++.
T Consensus 181 ~I~e~~---~vPVI~eGGI~TPsDAa~AmeLGAdgVlV 215 (265)
T 1wv2_A 181 IILEEA---KVPVLVDAGVGTASDAAIAMELGCEAVLM 215 (265)
T ss_dssp HHHHHC---SSCBEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHhcC---CCCEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 999853 79999988888999999999999999864
No 117
>1ccw_A Protein (glutamate mutase); coenzyme B12, radical reaction, TIM-barrel rossman-fold, isomerase; HET: CNC TAR; 1.60A {Clostridium cochlearium} SCOP: c.23.6.1 PDB: 1cb7_A* 1b1a_A 1i9c_A* 1be1_A 1fmf_A 1id8_A*
Probab=95.72 E-value=0.14 Score=37.88 Aligned_cols=104 Identities=9% Similarity=0.039 Sum_probs=67.2
Q ss_pred eCCHHHHHHHHHHhhcCCCEEEE---ECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC-C-HHHHH
Q 026239 22 DDSIIDRKLIERLLKTSSYQVTT---VDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM-T-GYDLL 96 (241)
Q Consensus 22 dd~~~~~~~l~~~L~~~g~~v~~---~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~-~-g~~ll 96 (241)
|-+..-...+..+|+..||+|.. ..+.++.++.+....+ |+|.+...+... . .-+++
T Consensus 14 d~HdiG~~~v~~~l~~~G~~Vi~lG~~~p~e~~v~~a~~~~~------------------d~v~lS~~~~~~~~~~~~~i 75 (137)
T 1ccw_A 14 DCHAVGNKILDHAFTNAGFNVVNIGVLSPQELFIKAAIETKA------------------DAILVSSLYGQGEIDCKGLR 75 (137)
T ss_dssp CCCCHHHHHHHHHHHHTTCEEEEEEEEECHHHHHHHHHHHTC------------------SEEEEEECSSTHHHHHTTHH
T ss_pred chhHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCC------------------CEEEEEecCcCcHHHHHHHH
Confidence 34455566788899999999883 4578888888865554 488888776431 1 23567
Q ss_pred HHHHhcCCCCCCcEEEEccC----CCh-HHHHHHHHhcccccccCCCCHHHHH
Q 026239 97 KKIKESSSLRDIPVVIMSSE----NVP-SRISRCLEEGAEEFFLKPVRLSDLN 144 (241)
Q Consensus 97 ~~ir~~~~~~~ipvIils~~----~~~-~~~~~~l~~Ga~~~l~KP~~~~~L~ 144 (241)
+.|++... ++++|++-... .+. .....+.+.|++.|+.--.+..++.
T Consensus 76 ~~l~~~g~-~~i~v~vGG~~~~~~~~~~~~~~~~~~~G~d~~~~~g~~~~~~~ 127 (137)
T 1ccw_A 76 QKCDEAGL-EGILLYVGGNIVVGKQHWPDVEKRFKDMGYDRVYAPGTPPEVGI 127 (137)
T ss_dssp HHHHHTTC-TTCEEEEEESCSSSSCCHHHHHHHHHHTTCSEECCTTCCHHHHH
T ss_pred HHHHhcCC-CCCEEEEECCCcCchHhhhhhHHHHHHCCCCEEECCCCCHHHHH
Confidence 77877643 36776554332 111 1244578899998887656665553
No 118
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=95.40 E-value=0.12 Score=41.83 Aligned_cols=86 Identities=10% Similarity=0.162 Sum_probs=60.1
Q ss_pred HHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC------CCCCCHHHHHHHHH
Q 026239 28 RKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC------MPGMTGYDLLKKIK 100 (241)
Q Consensus 28 ~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~------mp~~~g~~ll~~ir 100 (241)
...+.+.++..|..+. .+.+.+++...... .+|+|.+... .+...++++++.++
T Consensus 118 l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~-------------------Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~ 178 (229)
T 3q58_A 118 IDSLLTRIRLHGLLAMADCSTVNEGISCHQK-------------------GIEFIGTTLSGYTGPITPVEPDLAMVTQLS 178 (229)
T ss_dssp HHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-------------------TCSEEECTTTTSSSSCCCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEecCCHHHHHHHHhC-------------------CCCEEEecCccCCCCCcCCCCCHHHHHHHH
Confidence 3334444556677655 67788888776532 3557753221 22345789999998
Q ss_pred hcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 101 ESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 101 ~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
.. ++|||.-++-.+.+.+.++++.||++++.=
T Consensus 179 ~~----~ipvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 179 HA----GCRVIAEGRYNTPALAANAIEHGAWAVTVG 210 (229)
T ss_dssp TT----TCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred Hc----CCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 63 789999988888999999999999998653
No 119
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=95.39 E-value=0.12 Score=41.45 Aligned_cols=103 Identities=16% Similarity=0.176 Sum_probs=69.7
Q ss_pred CcceEEEE----eCCHHHHHHHHHHhhcCCCEEEEE---CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEE--e
Q 026239 14 SQFHVLAV----DDSIIDRKLIERLLKTSSYQVTTV---DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVIT--D 84 (241)
Q Consensus 14 ~~~~ILiV----dd~~~~~~~l~~~L~~~g~~v~~~---~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIil--D 84 (241)
...+|++. |-+..=...+..+|+..||+|+.. -..++.++.+....|| +|.+ .
T Consensus 91 ~~~~vll~~v~gd~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d------------------~v~l~~S 152 (215)
T 3ezx_A 91 EAGLAITFVAEGDIHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGE------------------KVLLVGS 152 (215)
T ss_dssp -CCEEEEEECTTCCCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTS------------------CEEEEEE
T ss_pred CCCeEEEEeCCCChhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCC------------------EEEEEch
Confidence 34677776 667777788899999999999854 3567777888665554 8888 7
Q ss_pred CCCCC-CC-HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 85 YCMPG-MT-GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 85 ~~mp~-~~-g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
..|.. +. --++++.+++.....++||++-......+. +-+.|||.|-.-.
T Consensus 153 ~l~~~~~~~~~~~i~~l~~~~~~~~v~v~vGG~~~~~~~---a~~iGad~~~~dA 204 (215)
T 3ezx_A 153 ALMTTSMLGQKDLMDRLNEEKLRDSVKCMFGGAPVSDKW---IEEIGADATAENA 204 (215)
T ss_dssp CSSHHHHTHHHHHHHHHHHTTCGGGSEEEEESSSCCHHH---HHHHTCCBCCSSH
T ss_pred hcccCcHHHHHHHHHHHHHcCCCCCCEEEEECCCCCHHH---HHHhCCeEEECCH
Confidence 76642 22 346778888765323678776655555443 4467998885543
No 120
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=95.39 E-value=0.12 Score=41.03 Aligned_cols=103 Identities=14% Similarity=0.120 Sum_probs=69.4
Q ss_pred CcceEEEE----eCCHHHHHHHHHHhhcCCCEEEEEC---CHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC
Q 026239 14 SQFHVLAV----DDSIIDRKLIERLLKTSSYQVTTVD---SGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC 86 (241)
Q Consensus 14 ~~~~ILiV----dd~~~~~~~l~~~L~~~g~~v~~~~---~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~ 86 (241)
...+||+. |-+..-...+..+|+..||+|.... ..++.++.+.... +|+|.+...
T Consensus 87 ~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~------------------~d~v~lS~~ 148 (210)
T 1y80_A 87 SVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQ------------------PDIVGMSAL 148 (210)
T ss_dssp CCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHC------------------CSEEEEECC
T ss_pred CCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcC------------------CCEEEEecc
Confidence 34577777 6667777889999999999998643 4667777775544 459998887
Q ss_pred CCC-CC-HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 87 MPG-MT-GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 87 mp~-~~-g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
+.. +. --++++.+++....+++||++-....+.+. +.+.|++.|..-.
T Consensus 149 ~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~~~~~~~---~~~~gad~~~~da 198 (210)
T 1y80_A 149 LTTTMMNMKSTIDALIAAGLRDRVKVIVGGAPLSQDF---ADEIGADGYAPDA 198 (210)
T ss_dssp SGGGTHHHHHHHHHHHHTTCGGGCEEEEESTTCCHHH---HHHHTCSEECSSH
T ss_pred ccccHHHHHHHHHHHHhcCCCCCCeEEEECCCCCHHH---HHHcCCeEEECCH
Confidence 653 22 346777888764323588777655555443 3567998775543
No 121
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=94.82 E-value=0.46 Score=38.96 Aligned_cols=101 Identities=13% Similarity=0.102 Sum_probs=69.4
Q ss_pred CcceEEEE----eCCHHHHHHHHHHhhcCCCEEEEE---CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC
Q 026239 14 SQFHVLAV----DDSIIDRKLIERLLKTSSYQVTTV---DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC 86 (241)
Q Consensus 14 ~~~~ILiV----dd~~~~~~~l~~~L~~~g~~v~~~---~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~ 86 (241)
...+||+. |-+..-...+..+|+..||+|... -..++.++.+....| |+|.+...
T Consensus 122 ~~~~vlla~~~gd~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~------------------d~V~lS~l 183 (258)
T 2i2x_B 122 TKGTVVCHVAEGDVHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKP------------------IMLTGTAL 183 (258)
T ss_dssp CSCEEEEEECTTCCCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCC------------------SEEEEECC
T ss_pred CCCeEEEEeCCCCccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCC------------------CEEEEEee
Confidence 35677777 566777788899999999998643 466777777765544 49998887
Q ss_pred CCC-CC-HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 87 MPG-MT-GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 87 mp~-~~-g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
+.. +. --++++.|++... ++||++-......+. +-..|++.|..-.
T Consensus 184 ~~~~~~~~~~~i~~l~~~~~--~~~v~vGG~~~~~~~---~~~igad~~~~da 231 (258)
T 2i2x_B 184 MTTTMYAFKEVNDMLLENGI--KIPFACGGGAVNQDF---VSQFALGVYGEEA 231 (258)
T ss_dssp CTTTTTHHHHHHHHHHTTTC--CCCEEEESTTCCHHH---HHTSTTEEECSST
T ss_pred ccCCHHHHHHHHHHHHhcCC--CCcEEEECccCCHHH---HHHcCCeEEECCH
Confidence 664 33 3467888888654 588776655555443 2367987776544
No 122
>1r8j_A KAIA; circadian clock protein; 2.03A {Synechococcus elongatus pcc 7942} SCOP: a.186.1.1 c.23.1.5 PDB: 1m2e_A 1m2f_A
Probab=94.82 E-value=0.46 Score=38.96 Aligned_cols=85 Identities=16% Similarity=0.198 Sum_probs=69.6
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
+.+.+.|.+.-.++.....+..+|...-|.+..+++..+.++++..+. ..+|++|+... +.+
T Consensus 6 ~~~~LsI~~~~~s~~l~~~~~~~L~~dRY~l~~~~s~~~f~~~le~~~----------------e~iDcLvle~~--~~~ 67 (289)
T 1r8j_A 6 VLSQIAICIWVESTAILQDCQRALSADRYQLQVCESGEMLLEYAQTHR----------------DQIDCLILVAA--NPS 67 (289)
T ss_dssp CCCCEEEEEECCCHHHHHHHHHHTCSTTEEEEEECSHHHHHHHHHHST----------------TSCSEEEEETT--STT
T ss_pred cccceeEEEEeCCHHHHHHHHHhcccCceEEEEcCcHHHHHHHHHhcc----------------ccCCEEEEEeC--CCc
Confidence 466789999999999999999999888899999999999999997654 34889998762 234
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccC
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSE 116 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~ 116 (241)
-..++..+.+.+. -+|+|++...
T Consensus 68 ~~~~~~~L~~~g~--lLP~vil~~~ 90 (289)
T 1r8j_A 68 FRAVVQQLCFEGV--VVPAIVVGDR 90 (289)
T ss_dssp HHHHHHHHHHTTC--CCCEEEESCC
T ss_pred cHHHHHHHHHcCc--cccEEEeccC
Confidence 6788889998775 6899998665
No 123
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=94.81 E-value=0.22 Score=40.34 Aligned_cols=85 Identities=15% Similarity=0.191 Sum_probs=59.1
Q ss_pred HHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC------CCCCCHHHHHHHHH
Q 026239 28 RKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC------MPGMTGYDLLKKIK 100 (241)
Q Consensus 28 ~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~------mp~~~g~~ll~~ir 100 (241)
...+.+.++..|..+. .+.+.+++...... .+|+|.+... .....++++++.++
T Consensus 118 l~~~i~~~~~~g~~v~~~v~t~eea~~a~~~-------------------Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~ 178 (232)
T 3igs_A 118 VEALLARIHHHHLLTMADCSSVDDGLACQRL-------------------GADIIGTTMSGYTTPDTPEEPDLPLVKALH 178 (232)
T ss_dssp HHHHHHHHHHTTCEEEEECCSHHHHHHHHHT-------------------TCSEEECTTTTSSSSSCCSSCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEeCCCHHHHHHHHhC-------------------CCCEEEEcCccCCCCCCCCCCCHHHHHHHH
Confidence 3334444556676655 56788888766532 3456653221 12345689999998
Q ss_pred hcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 101 ESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 101 ~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.. ++|||.-++-.+.+.+.++++.||++++.
T Consensus 179 ~~----~ipvIA~GGI~t~~d~~~~~~~GadgV~V 209 (232)
T 3igs_A 179 DA----GCRVIAEGRYNSPALAAEAIRYGAWAVTV 209 (232)
T ss_dssp HT----TCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred hc----CCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 74 68999988888899999999999999865
No 124
>1xrs_B D-lysine 5,6-aminomutase beta subunit; TIM barrel, rossmann domain, PLP, cobalamin, 5'-deoxyad radical, adenosylcobalamin; HET: B12 PLP 5AD; 2.80A {Clostridium sticklandii} SCOP: c.23.6.1 d.230.4.1
Probab=94.15 E-value=0.83 Score=37.61 Aligned_cols=110 Identities=9% Similarity=0.043 Sum_probs=70.4
Q ss_pred CcceEEEE----eCCHHHHHHHHHH--------hhcC-CCEEEEE---CCHHHHHHHhcccCCCCCCCCCCCCCCccccc
Q 026239 14 SQFHVLAV----DDSIIDRKLIERL--------LKTS-SYQVTTV---DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVG 77 (241)
Q Consensus 14 ~~~~ILiV----dd~~~~~~~l~~~--------L~~~-g~~v~~~---~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~ 77 (241)
...+|++. |-+..=...+..+ |+.. ||+|+.. -..++.++.+....
T Consensus 119 ~~~~Vvlatv~gD~HdiG~~iv~~~k~~~~~~~L~~~~G~eVi~LG~~vp~e~iv~aa~e~~------------------ 180 (262)
T 1xrs_B 119 RKIVVVGASTGTDAHTVGIDAIMNMKGYAGHYGLERYEMIDAYNLGSQVANEDFIKKAVELE------------------ 180 (262)
T ss_dssp SCEEEEEEEBTTCCCCHHHHHHHSTTCBTTBCCGGGCTTEEEEECCSSBCHHHHHHHHHHTT------------------
T ss_pred CCCEEEEEeCCCCCchHHHHHHhhhhcccchHHHHhcCCcEEEECCCCCCHHHHHHHHHHcC------------------
Confidence 34566554 5556666667767 8999 9999753 36777888776554
Q ss_pred ccEEEEeCCCCCC----CH-HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHH
Q 026239 78 VNLVITDYCMPGM----TG-YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLN 144 (241)
Q Consensus 78 ~dlIilD~~mp~~----~g-~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~ 144 (241)
+|+|.+...+... .. -++++.+++.....+++|++=....+.+ .+.+.|++.|+.--....++.
T Consensus 181 ~d~VglS~l~t~~~~~~~~~~~~i~~L~~~g~~~~i~vivGG~~~~~~---~a~~iGad~~~~da~~~~~~a 249 (262)
T 1xrs_B 181 ADVLLVSQTVTQKNVHIQNMTHLIELLEAEGLRDRFVLLCGGPRINNE---IAKELGYDAGFGPGRFADDVA 249 (262)
T ss_dssp CSEEEEECCCCTTSHHHHHHHHHHHHHHHTTCGGGSEEEEECTTCCHH---HHHTTTCSEEECTTCCHHHHH
T ss_pred CCEEEEEeecCCccchHHHHHHHHHHHHhcCCCCCCEEEEECCcCCHH---HHHHcCCeEEECCchHHHHHH
Confidence 4599998887652 22 2467777775432236665544443333 366789998887666666653
No 125
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=94.09 E-value=0.11 Score=42.71 Aligned_cols=80 Identities=20% Similarity=0.199 Sum_probs=53.3
Q ss_pred HhhcCCCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH-----HHHHHHHHhcCCCC
Q 026239 34 LLKTSSYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG-----YDLLKKIKESSSLR 106 (241)
Q Consensus 34 ~L~~~g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g-----~~ll~~ir~~~~~~ 106 (241)
.|...||.|. +.+|...|- .+....+ ++| +.+..|-.+| .++++.+++...
T Consensus 119 ~L~k~Gf~Vlpy~~~D~~~ak-~l~~~G~------------------~aV-mPlg~pIGsG~Gi~~~~~L~~i~~~~~-- 176 (268)
T 2htm_A 119 RLIEEDFLVLPYMGPDLVLAK-RLAALGT------------------ATV-MPLAAPIGSGWGVRTRALLELFAREKA-- 176 (268)
T ss_dssp HHHHTTCEECCEECSCHHHHH-HHHHHTC------------------SCB-EEBSSSTTTCCCSTTHHHHHHHHHTTT--
T ss_pred HHHHCCCEEeeccCCCHHHHH-HHHhcCC------------------CEE-EecCccCcCCcccCCHHHHHHHHHhcC--
Confidence 3445699876 345654433 3322222 244 6666553333 567899987433
Q ss_pred C-CcEEEEccCCChHHHHHHHHhccccccc
Q 026239 107 D-IPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 107 ~-ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
+ +|||+=.+-..++.+..++++||++++.
T Consensus 177 ~~vPVI~~GGI~tpsDAa~AmeLGAdgVlV 206 (268)
T 2htm_A 177 SLPPVVVDAGLGLPSHAAEVMELGLDAVLV 206 (268)
T ss_dssp TSSCBEEESCCCSHHHHHHHHHTTCCEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 6 9999988888999999999999999864
No 126
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=93.41 E-value=0.88 Score=43.08 Aligned_cols=120 Identities=15% Similarity=0.100 Sum_probs=77.2
Q ss_pred CcceEEEE----eCCHHHHHHHHHHhhcCCCEEEEE---CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC
Q 026239 14 SQFHVLAV----DDSIIDRKLIERLLKTSSYQVTTV---DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC 86 (241)
Q Consensus 14 ~~~~ILiV----dd~~~~~~~l~~~L~~~g~~v~~~---~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~ 86 (241)
.+.+|++. |.+..-...+..+|...||+|... .+.++.++...... +|+|.+...
T Consensus 603 ~r~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~v~~eeiv~aA~e~~------------------adiVglSsl 664 (762)
T 2xij_A 603 RRPRLLVAKMGQDGHDRGAKVIATGFADLGFDVDIGPLFQTPREVAQQAVDAD------------------VHAVGVSTL 664 (762)
T ss_dssp SCCEEEEECCSSCCCCHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTT------------------CSEEEEEEC
T ss_pred CCCEEEEEecCcchhhHHHHHHHHHHHhCCeEEeeCCCCCCHHHHHHHHHHcC------------------CCEEEEeee
Confidence 45677765 445555677888999999999853 36788888876544 448887765
Q ss_pred CCC-C-CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 87 MPG-M-TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 87 mp~-~-~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
|.. + ..-++++.|++... ++++|+ +.+..-......+.+.|+++|+..-.+..+....+..++..
T Consensus 665 ~~~~~~~~~~vi~~Lr~~G~-~dv~Vi-vGG~~P~~d~~~l~~~GaD~~f~pgtd~~e~~~~i~~~l~~ 731 (762)
T 2xij_A 665 AAGHKTLVPELIKELNSLGR-PDILVM-CGGVIPPQDYEFLFEVGVSNVFGPGTRIPKAAVQVLDDIEK 731 (762)
T ss_dssp SSCHHHHHHHHHHHHHHTTC-TTSEEE-EEESCCGGGHHHHHHHTCCEEECTTCCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHhcCC-CCCEEE-EeCCCCcccHHHHHhCCCCEEeCCCCCHHHHHHHHHHHHHH
Confidence 543 2 24567888888754 355444 44322222345578899999998666777765544444433
No 127
>3kp1_A D-ornithine aminomutase E component; 5 aminomutase (OAM), metal binding protein; HET: PLP B12 5AD; 2.01A {Clostridium sticklandii} PDB: 3kow_A* 3koy_A* 3koz_A* 3kp0_A* 3kox_A*
Probab=93.36 E-value=0.85 Score=42.25 Aligned_cols=112 Identities=8% Similarity=0.089 Sum_probs=71.2
Q ss_pred hcCcceEEEE----eCCHHHHHHH----HHHhhcCCCEEEEE---CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccE
Q 026239 12 AESQFHVLAV----DDSIIDRKLI----ERLLKTSSYQVTTV---DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNL 80 (241)
Q Consensus 12 ~~~~~~ILiV----dd~~~~~~~l----~~~L~~~g~~v~~~---~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dl 80 (241)
.+.+.+||+. |-+..=...+ ..+|+..||+|+.. -+.++.++.+.... +|+
T Consensus 599 ~e~kGKVVIATVgGD~HDIGKklVaNIVa~~LE~aGFEVIDLGvdVPpEeIVeAA~Eed------------------ADV 660 (763)
T 3kp1_A 599 EKTPLKIVAATVGEDEHSVGLREVIDIKHGGIEKYGVEVHYLGTSVPVEKLVDAAIELK------------------ADA 660 (763)
T ss_dssp HHSCCEEEEEEBTTCCCCHHHHHTTSTTTTCGGGGTCEEEECCSSBCHHHHHHHHHHTT------------------CSE
T ss_pred hccCCEEEEEeCCCChhhhhhHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcC------------------CCE
Confidence 3456788776 3343333322 46789999999854 36788888886554 459
Q ss_pred EEEeCCCCC----CCH-HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHH
Q 026239 81 VITDYCMPG----MTG-YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLN 144 (241)
Q Consensus 81 IilD~~mp~----~~g-~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~ 144 (241)
|.+...|.. +.. -++++.|++.+....++|++=......+ -+.+.||+.|+.--....++.
T Consensus 661 VGLSsLLTt~dihL~~MkevIelLrE~GlrDkIkVIVGGa~~tqd---~AkeIGADa~f~DATeAVeVA 726 (763)
T 3kp1_A 661 ILASTIISHDDIHYKNMKRIHELAVEKGIRDKIMIGCGGTQVTPE---VAVKQGVDAGFGRGSKGIHVA 726 (763)
T ss_dssp EEEECCCCGGGHHHHHHHHHHHHHHHTTCTTTSEEEEECTTCCHH---HHHTTTCSEEECTTCCHHHHH
T ss_pred EEEeccccCchhhHHHHHHHHHHHHhcCCCCCCEEEEECCCCCHH---HHHHcCCcEEECCcchHHHHH
Confidence 999987775 233 3467778876542236665543334433 245899999988766666553
No 128
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=92.91 E-value=1.1 Score=37.16 Aligned_cols=88 Identities=10% Similarity=0.034 Sum_probs=57.8
Q ss_pred HHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-C-CCHHHHHHHHHhcCC
Q 026239 28 RKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-G-MTGYDLLKKIKESSS 104 (241)
Q Consensus 28 ~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-~-~~g~~ll~~ir~~~~ 104 (241)
...+.......|..+. .+.+.+++...+.. .+|+|-+.-.-. . ..+++.+.+|....+
T Consensus 151 l~~l~~~a~~lGl~~lvev~t~ee~~~A~~~-------------------Gad~IGv~~r~l~~~~~dl~~~~~l~~~v~ 211 (272)
T 3qja_A 151 LVSMLDRTESLGMTALVEVHTEQEADRALKA-------------------GAKVIGVNARDLMTLDVDRDCFARIAPGLP 211 (272)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-------------------TCSEEEEESBCTTTCCBCTTHHHHHGGGSC
T ss_pred HHHHHHHHHHCCCcEEEEcCCHHHHHHHHHC-------------------CCCEEEECCCcccccccCHHHHHHHHHhCc
Confidence 3334445566788765 67888887665532 234666542211 1 123566777776432
Q ss_pred CCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 105 LRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 105 ~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.++|||.-++-.+.+.+..+.+.|+++++.
T Consensus 212 -~~~pvVaegGI~t~edv~~l~~~GadgvlV 241 (272)
T 3qja_A 212 -SSVIRIAESGVRGTADLLAYAGAGADAVLV 241 (272)
T ss_dssp -TTSEEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred -ccCEEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 268999988888899999999999999976
No 129
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=92.52 E-value=1.2 Score=41.98 Aligned_cols=112 Identities=13% Similarity=0.117 Sum_probs=73.6
Q ss_pred CcceEEEE----eCCHHHHHHHHHHhhcCCCEEEEE---CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC
Q 026239 14 SQFHVLAV----DDSIIDRKLIERLLKTSSYQVTTV---DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC 86 (241)
Q Consensus 14 ~~~~ILiV----dd~~~~~~~l~~~L~~~g~~v~~~---~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~ 86 (241)
.+.+|++. |.+..-...+..+|...||+|... .+.++.++...... +|+|.+...
T Consensus 595 ~r~kVvlatvg~D~HdiG~~iVa~~l~~~GfeVi~lG~~v~~eeiv~aA~e~~------------------adiVglSsl 656 (727)
T 1req_A 595 RRPRILLAKMGQDGHDRGQKVIATAYADLGFDVDVGPLFQTPEETARQAVEAD------------------VHVVGVSSL 656 (727)
T ss_dssp SCCEEEEECBTTCCCCHHHHHHHHHHHHHTCEEEECCTTBCHHHHHHHHHHTT------------------CSEEEEEEC
T ss_pred CCCEEEEEeCCcchhHHHHHHHHHHHHhCCeEEEeCCCCCCHHHHHHHHHHcC------------------CCEEEEeee
Confidence 45677765 455556677888999999999854 35688888876544 448888766
Q ss_pred CCC-C-CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHH
Q 026239 87 MPG-M-TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNK 145 (241)
Q Consensus 87 mp~-~-~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~ 145 (241)
|.. + ..-++++.|++... ++++|+ +.+.........+.+.|+++|+.--.+..++.+
T Consensus 657 ~~~~~~~~~~vi~~L~~~G~-~~i~Vi-vGG~~p~~d~~~l~~~GaD~~f~~gt~~~e~a~ 715 (727)
T 1req_A 657 AGGHLTLVPALRKELDKLGR-PDILIT-VGGVIPEQDFDELRKDGAVEIYTPGTVIPESAI 715 (727)
T ss_dssp SSCHHHHHHHHHHHHHHTTC-TTSEEE-EEESCCGGGHHHHHHTTEEEEECTTCCHHHHHH
T ss_pred cHhHHHHHHHHHHHHHhcCC-CCCEEE-EcCCCccccHHHHHhCCCCEEEcCCccHHHHHH
Confidence 543 2 24567888888653 355444 444233333455789999999986566666543
No 130
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=92.37 E-value=1.4 Score=34.87 Aligned_cols=81 Identities=22% Similarity=0.312 Sum_probs=52.8
Q ss_pred HHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC-------CCHHHHHHHHH
Q 026239 29 KLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG-------MTGYDLLKKIK 100 (241)
Q Consensus 29 ~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~-------~~g~~ll~~ir 100 (241)
..++.++. +..+. .+.+..++..... ..+|.|+++...+. ..|++.++.++
T Consensus 102 ~~~~~~~~--~~~ig~sv~t~~~~~~a~~-------------------~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~ 160 (221)
T 1yad_A 102 KQIRARFP--HLHIGRSVHSLEEAVQAEK-------------------EDADYVLFGHVFETDCKKGLEGRGVSLLSDIK 160 (221)
T ss_dssp HHHHHHCT--TCEEEEEECSHHHHHHHHH-------------------TTCSEEEEECCC----------CHHHHHHHHH
T ss_pred HHHHHHCC--CCEEEEEcCCHHHHHHHHh-------------------CCCCEEEECCccccCCCCCCCCCCHHHHHHHH
Confidence 34444442 44333 5667777766543 22568888764332 23688888887
Q ss_pred hcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 101 ESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 101 ~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
... ++||++..+- +.+.+..+++.||+++.
T Consensus 161 ~~~---~~pvia~GGI-~~~nv~~~~~~Ga~gv~ 190 (221)
T 1yad_A 161 QRI---SIPVIAIGGM-TPDRLRDVKQAGADGIA 190 (221)
T ss_dssp HHC---CSCEEEESSC-CGGGHHHHHHTTCSEEE
T ss_pred HhC---CCCEEEECCC-CHHHHHHHHHcCCCEEE
Confidence 653 6899888776 78888999999998764
No 131
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=91.88 E-value=0.45 Score=39.11 Aligned_cols=56 Identities=20% Similarity=0.305 Sum_probs=39.3
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCC------hHHHHHHHHhcccccccCCCCHHHHHHhhHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENV------PSRISRCLEEGAEEFFLKPVRLSDLNKLKPH 149 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~------~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~ 149 (241)
.+++++.+|+..+ ++|+++|+..+. ...+..|.++|+++++.-.+..+++..++..
T Consensus 81 ~~~~v~~ir~~~~--~~Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dgvii~dl~~ee~~~~~~~ 142 (262)
T 2ekc_A 81 VLELSETLRKEFP--DIPFLLMTYYNPIFRIGLEKFCRLSREKGIDGFIVPDLPPEEAEELKAV 142 (262)
T ss_dssp HHHHHHHHHHHCT--TSCEEEECCHHHHHHHCHHHHHHHHHHTTCCEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhcC--CCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEECCCCHHHHHHHHHH
Confidence 4567888887632 789999864431 3456778899999999977777666554443
No 132
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=91.51 E-value=2.4 Score=34.33 Aligned_cols=71 Identities=15% Similarity=0.269 Sum_probs=49.7
Q ss_pred EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC-------CCHHHHHHHHHhcCCCCCCcEEEEccC
Q 026239 44 TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG-------MTGYDLLKKIKESSSLRDIPVVIMSSE 116 (241)
Q Consensus 44 ~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~-------~~g~~ll~~ir~~~~~~~ipvIils~~ 116 (241)
.+.+.+++..... ..+|.|.+.-..|. .-|++.+++++.... .++|||.+.+-
T Consensus 141 S~ht~~Ea~~A~~-------------------~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~-~~iPvvAiGGI 200 (243)
T 3o63_A 141 STHDPDQVAAAAA-------------------GDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGG-DDKPWFAIGGI 200 (243)
T ss_dssp EECSHHHHHHHHH-------------------SSCSEEEECCSSCCCC-----CCCHHHHHHHHTC----CCCEEEESSC
T ss_pred eCCCHHHHHHHhh-------------------CCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhcc-CCCCEEEecCC
Confidence 5678888776553 23568887654443 237888999987521 27999999876
Q ss_pred CChHHHHHHHHhccccccc
Q 026239 117 NVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 117 ~~~~~~~~~l~~Ga~~~l~ 135 (241)
+.+.+..++.+||+++..
T Consensus 201 -~~~ni~~~~~aGa~gvav 218 (243)
T 3o63_A 201 -NAQRLPAVLDAGARRIVV 218 (243)
T ss_dssp -CTTTHHHHHHTTCCCEEE
T ss_pred -CHHHHHHHHHcCCCEEEE
Confidence 567788999999998754
No 133
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=91.45 E-value=0.4 Score=38.73 Aligned_cols=51 Identities=14% Similarity=0.320 Sum_probs=36.5
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCC------hHHHHHHHHhcccccccCCCCHHHHHHh
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENV------PSRISRCLEEGAEEFFLKPVRLSDLNKL 146 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~------~~~~~~~l~~Ga~~~l~KP~~~~~L~~~ 146 (241)
+++++.+++.. ++||++++..+. ...+..++++||+.++.-.....+...+
T Consensus 69 ~~~i~~i~~~~---~~pv~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~~~~~~~~~~~~ 125 (248)
T 1geq_A 69 FWIVKEFRRHS---STPIVLMTYYNPIYRAGVRNFLAEAKASGVDGILVVDLPVFHAKEF 125 (248)
T ss_dssp HHHHHHHHTTC---CCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTCCGGGHHHH
T ss_pred HHHHHHHHhhC---CCCEEEEeccchhhhcCHHHHHHHHHHCCCCEEEECCCChhhHHHH
Confidence 77888888753 679998875333 4678889999999988865555444333
No 134
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=91.11 E-value=2.7 Score=36.72 Aligned_cols=101 Identities=16% Similarity=0.206 Sum_probs=64.4
Q ss_pred cceEEEEeC----CHHHHHHHHHHhhcCCCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC--
Q 026239 15 QFHVLAVDD----SIIDRKLIERLLKTSSYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC-- 86 (241)
Q Consensus 15 ~~~ILiVdd----~~~~~~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~-- 86 (241)
...++++|- .....+.++.+-+..+..|. .+.+.++|..++.. .+|.|++.+.
T Consensus 156 GvdvIvldta~G~~~~~~e~I~~ik~~~~i~Vi~g~V~t~e~A~~a~~a-------------------GAD~I~vG~g~G 216 (400)
T 3ffs_A 156 GVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIEN-------------------GADGIKVGIGPG 216 (400)
T ss_dssp TCSEEEECCSCCSBHHHHHHHHHHHTTCCCEEEEEEECSHHHHHHHHHT-------------------TCSEEEECC---
T ss_pred CCCEEEEeCCCCCcccHHHHHHHHHhcCCCeEEEeecCCHHHHHHHHHc-------------------CCCEEEEeCCCC
Confidence 466777752 23345555555454466554 57888888776642 3557777321
Q ss_pred ---------CCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 87 ---------MPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 87 ---------mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
-.+...++++..+.......++|||.-.+-.+...+..++.+||+.+.
T Consensus 217 s~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V~ 273 (400)
T 3ffs_A 217 SICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVM 273 (400)
T ss_dssp ------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEEE
T ss_pred cCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEEE
Confidence 012345667777764321237999988888889999999999998763
No 135
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=89.39 E-value=0.56 Score=38.63 Aligned_cols=57 Identities=18% Similarity=0.417 Sum_probs=39.5
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCC------ChHHHHHHHHhcccccccCCCCHHHHHHhhHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSEN------VPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHL 150 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~------~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l 150 (241)
++++++.||+... ++||++|+..+ ....+..+.++|+++++.-....+++..++..+
T Consensus 81 ~~~~v~~ir~~~~--~~Pv~lm~y~n~v~~~g~~~~~~~~~~aGadgii~~d~~~e~~~~~~~~~ 143 (268)
T 1qop_A 81 CFEMLAIIREKHP--TIPIGLLMYANLVFNNGIDAFYARCEQVGVDSVLVADVPVEESAPFRQAA 143 (268)
T ss_dssp HHHHHHHHHHHCS--SSCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEETTCCGGGCHHHHHHH
T ss_pred HHHHHHHHHhcCC--CCCEEEEEcccHHHHhhHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHHH
Confidence 4577888887632 78999886332 246677889999999988777766555544443
No 136
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=89.32 E-value=3.9 Score=32.56 Aligned_cols=49 Identities=18% Similarity=0.399 Sum_probs=29.8
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDL 143 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L 143 (241)
++++.++.|++..+ + .+|-...-.+.+....+.++||+ |+.-|....++
T Consensus 50 ~a~~~I~~l~~~~p--~-~~IGAGTVlt~~~a~~ai~AGA~-fivsP~~~~ev 98 (217)
T 3lab_A 50 AGLAAISAIKKAVP--E-AIVGAGTVCTADDFQKAIDAGAQ-FIVSPGLTPEL 98 (217)
T ss_dssp THHHHHHHHHHHCT--T-SEEEEECCCSHHHHHHHHHHTCS-EEEESSCCHHH
T ss_pred cHHHHHHHHHHHCC--C-CeEeeccccCHHHHHHHHHcCCC-EEEeCCCcHHH
Confidence 56777777776542 3 44444445567777777888874 55556544444
No 137
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=88.73 E-value=2.9 Score=32.54 Aligned_cols=53 Identities=26% Similarity=0.403 Sum_probs=39.7
Q ss_pred ccEEEEeCCCCC-------CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 78 VNLVITDYCMPG-------MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 78 ~dlIilD~~mp~-------~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
+|.|+++-..|. ..+++.++.++... ++||++..+-. .+.+..+++.|++++.
T Consensus 129 ~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~---~~pvia~GGI~-~~nv~~~~~~Ga~gv~ 188 (215)
T 1xi3_A 129 ADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV---KIPVVAIGGIN-KDNAREVLKTGVDGIA 188 (215)
T ss_dssp CSEEEEECSSCC----CCCCCHHHHHHHHHHHC---SSCEEEESSCC-TTTHHHHHTTTCSEEE
T ss_pred CCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC---CCCEEEECCcC-HHHHHHHHHcCCCEEE
Confidence 568888754443 35788999988753 68998877655 7778888899998874
No 138
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=88.59 E-value=0.33 Score=40.14 Aligned_cols=56 Identities=13% Similarity=0.381 Sum_probs=40.8
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCC------ChHHHHHHHHhcccccccCCCCHHHHHHhhHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSEN------VPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHL 150 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~------~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l 150 (241)
+++++.+|+... ++||++|+-.+ ....+.+|.++|+++++.-....++...++..+
T Consensus 83 ~~~v~~ir~~~~--~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~ 144 (267)
T 3vnd_A 83 FDIITKVRAQHP--DMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEESAPFSKAA 144 (267)
T ss_dssp HHHHHHHHHHCT--TCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHH
T ss_pred HHHHHHHHhcCC--CCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHH
Confidence 678888887533 78999997643 255688899999999988767776655544444
No 139
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=88.43 E-value=4.3 Score=34.13 Aligned_cols=54 Identities=20% Similarity=0.220 Sum_probs=40.0
Q ss_pred ccEEEEeCCCC----C---CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 78 VNLVITDYCMP----G---MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 78 ~dlIilD~~mp----~---~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
+|.|+++-.-+ + ...+++++.++... ++|||+-.+-.+.+.+..++..||+++.
T Consensus 139 aD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~---~iPviaaGGI~~~~~v~~al~~GAdgV~ 199 (328)
T 2gjl_A 139 VDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL---RVPIIASGGFADGRGLVAALALGADAIN 199 (328)
T ss_dssp CSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC---CSCEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred CCEEEEECCCCCcCCCCccccHHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 56777753222 1 25678899988643 7899988887788889999999998763
No 140
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=88.26 E-value=1 Score=37.29 Aligned_cols=55 Identities=15% Similarity=0.206 Sum_probs=38.7
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCC------ChHHHHHHHHhcccccccCCCCHHHHHHhhHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSEN------VPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHL 150 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~------~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l 150 (241)
+++++.+|+. . ++||++|+-.+ ....+..|.++|+++++.-.+..+++..++..+
T Consensus 80 ~~~v~~ir~~-~--~~Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ee~~~~~~~~ 140 (271)
T 1ujp_A 80 LELVREVRAL-T--EKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLA 140 (271)
T ss_dssp HHHHHHHHHH-C--CSCEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCGGGCHHHHHHH
T ss_pred HHHHHHHHhc-C--CCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCHHHHHHHHHHH
Confidence 5778888876 3 79999986332 234566788999999998767666655544443
No 141
>3bul_A Methionine synthase; transferase, reactivation conformation, cobalamin, intermodular interactions, amino-acid biosynthesis, cobalt; HET: B12; 2.30A {Escherichia coli} SCOP: a.46.1.1 c.23.6.1 d.173.1.1 PDB: 3iv9_A* 3iva_A* 1k7y_A* 1k98_A* 1bmt_A*
Probab=88.04 E-value=4.1 Score=37.37 Aligned_cols=102 Identities=12% Similarity=0.201 Sum_probs=68.0
Q ss_pred cceEEEE----eCCHHHHHHHHHHhhcCCCEEEEE---CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC
Q 026239 15 QFHVLAV----DDSIIDRKLIERLLKTSSYQVTTV---DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM 87 (241)
Q Consensus 15 ~~~ILiV----dd~~~~~~~l~~~L~~~g~~v~~~---~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m 87 (241)
..+||+. |-+..-..++..+|...||+|+.. -..++.++.+.... +|+|.+...+
T Consensus 98 ~~kVLlatv~GD~HdiG~~iva~~L~~~G~eVi~LG~~vP~e~iv~aa~~~~------------------~diVgLS~l~ 159 (579)
T 3bul_A 98 NGKMVIATVKGDVHDIGKNIVGVVLQCNNYEIVDLGVMVPAEKILRTAKEVN------------------ADLIGLSGLI 159 (579)
T ss_dssp SCEEEEEEBTTCCCCHHHHHHHHHHHTTTCEEEECCSSBCHHHHHHHHHHHT------------------CSEEEEECCS
T ss_pred CCeEEEEECCCCCchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcC------------------CCEEEEEecC
Confidence 5677777 566677788888999999999854 35777777776554 4499988766
Q ss_pred CC-CC-HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHh-----cccccccCCC
Q 026239 88 PG-MT-GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEE-----GAEEFFLKPV 138 (241)
Q Consensus 88 p~-~~-g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~-----Ga~~~l~KP~ 138 (241)
.. ++ --++++.|++.+. ++||++-.......... -+. ||+.|..--.
T Consensus 160 t~~~~~m~~~i~~Lr~~g~--~i~ViVGGa~~~~~~a~--~~i~p~~~GAD~ya~DA~ 213 (579)
T 3bul_A 160 TPSLDEMVNVAKEMERQGF--TIPLLIGGATTSKAHTA--VKIEQNYSGPTVYVQNAS 213 (579)
T ss_dssp THHHHHHHHHHHHHHHTTC--CSCEEEESTTCCHHHHH--HHTGGGCSSCEEECCSHH
T ss_pred CCCHHHHHHHHHHHHHcCC--CCeEEEEccccchhhhh--hhhhhcccCCeEEECCHH
Confidence 43 11 2346778887654 78887665555544321 133 8887765444
No 142
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=87.86 E-value=5.7 Score=34.23 Aligned_cols=102 Identities=20% Similarity=0.235 Sum_probs=63.6
Q ss_pred cCcceEEEEe----CCHHHHHHHHHHhhcC-CCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeC
Q 026239 13 ESQFHVLAVD----DSIIDRKLIERLLKTS-SYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDY 85 (241)
Q Consensus 13 ~~~~~ILiVd----d~~~~~~~l~~~L~~~-g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~ 85 (241)
+....+++|| +.....+.++.+-+.. +..|. .+.+.++|..+... ..|.|.+.+
T Consensus 118 eaGvd~I~idta~G~~~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~a-------------------GAD~I~vG~ 178 (366)
T 4fo4_A 118 EAGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEA-------------------GVSAVKVGI 178 (366)
T ss_dssp HTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHH-------------------TCSEEEECS
T ss_pred hCCCCEEEEeCCCCCCHHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHc-------------------CCCEEEEec
Confidence 3456777775 2344444455554444 44443 47788888776642 355777742
Q ss_pred CCCC------------CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 86 CMPG------------MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 86 ~mp~------------~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
. |+ ...++++..+.......++|||.-.+-.+...+..++.+||+.+.
T Consensus 179 g-pGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~ 238 (366)
T 4fo4_A 179 G-PGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVM 238 (366)
T ss_dssp S-CSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred C-CCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 1 21 234566666654211127999988888788999999999998764
No 143
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=87.53 E-value=4.9 Score=33.15 Aligned_cols=93 Identities=12% Similarity=0.096 Sum_probs=59.2
Q ss_pred HHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC-CCCC-CHHHHHHHHHhcCCCC
Q 026239 30 LIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC-MPGM-TGYDLLKKIKESSSLR 106 (241)
Q Consensus 30 ~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~-mp~~-~g~~ll~~ir~~~~~~ 106 (241)
.+.......|..+. .+.+.+++...+.. .+|+|=+... +-.. ..++....|...-+ .
T Consensus 160 ~l~~~a~~lGl~~lvevh~~eEl~~A~~~-------------------ga~iIGinnr~l~t~~~dl~~~~~L~~~ip-~ 219 (272)
T 3tsm_A 160 ELEDTAFALGMDALIEVHDEAEMERALKL-------------------SSRLLGVNNRNLRSFEVNLAVSERLAKMAP-S 219 (272)
T ss_dssp HHHHHHHHTTCEEEEEECSHHHHHHHTTS-------------------CCSEEEEECBCTTTCCBCTHHHHHHHHHSC-T
T ss_pred HHHHHHHHcCCeEEEEeCCHHHHHHHHhc-------------------CCCEEEECCCCCccCCCChHHHHHHHHhCC-C
Confidence 34444556788765 67888888766532 2346544421 1111 12455555554432 3
Q ss_pred CCcEEEEccCCChHHHHHHHHhccccccc-----CCCCHHH
Q 026239 107 DIPVVIMSSENVPSRISRCLEEGAEEFFL-----KPVRLSD 142 (241)
Q Consensus 107 ~ipvIils~~~~~~~~~~~l~~Ga~~~l~-----KP~~~~~ 142 (241)
++|+|.-++-..++.+.++.++|+++|+. ++-++..
T Consensus 220 ~~~vIaesGI~t~edv~~l~~~Ga~gvLVG~almr~~d~~~ 260 (272)
T 3tsm_A 220 DRLLVGESGIFTHEDCLRLEKSGIGTFLIGESLMRQHDVAA 260 (272)
T ss_dssp TSEEEEESSCCSHHHHHHHHTTTCCEEEECHHHHTSSCHHH
T ss_pred CCcEEEECCCCCHHHHHHHHHcCCCEEEEcHHHcCCcCHHH
Confidence 68999999988999999999999999965 5555443
No 144
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=87.36 E-value=4 Score=32.66 Aligned_cols=42 Identities=24% Similarity=0.326 Sum_probs=32.9
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
+++.++.+++.. ++||++-.+-...+.+..++.+||++++.=
T Consensus 179 ~~~~i~~l~~~~---~~pi~~~GGI~~~e~i~~~~~~Gad~vivG 220 (248)
T 1geq_A 179 AYDLLRRAKRIC---RNKVAVGFGVSKREHVVSLLKEGANGVVVG 220 (248)
T ss_dssp HHHHHHHHHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhhc---CCCEEEEeecCCHHHHHHHHHcCCCEEEEc
Confidence 356788888753 689888777777688889989999998754
No 145
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=87.33 E-value=4.9 Score=33.90 Aligned_cols=79 Identities=27% Similarity=0.297 Sum_probs=53.3
Q ss_pred HhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-C----CCHHHHHHHHHhcCCCCC
Q 026239 34 LLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-G----MTGYDLLKKIKESSSLRD 107 (241)
Q Consensus 34 ~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-~----~~g~~ll~~ir~~~~~~~ 107 (241)
.++..|..|. .+.+.+++..... ..+|.|+++-.-. + ...++++..++... +
T Consensus 119 ~l~~~g~~v~~~v~s~~~a~~a~~-------------------~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~---~ 176 (326)
T 3bo9_A 119 ELKENGTKVIPVVASDSLARMVER-------------------AGADAVIAEGMESGGHIGEVTTFVLVNKVSRSV---N 176 (326)
T ss_dssp HHHHTTCEEEEEESSHHHHHHHHH-------------------TTCSCEEEECTTSSEECCSSCHHHHHHHHHHHC---S
T ss_pred HHHHcCCcEEEEcCCHHHHHHHHH-------------------cCCCEEEEECCCCCccCCCccHHHHHHHHHHHc---C
Confidence 3444565554 4567777665543 2245777753222 2 35688999988653 6
Q ss_pred CcEEEEccCCChHHHHHHHHhcccccc
Q 026239 108 IPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 108 ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
+|||+-.+-.+.+.+..++..||+++.
T Consensus 177 iPviaaGGI~~~~dv~~al~~GA~gV~ 203 (326)
T 3bo9_A 177 IPVIAAGGIADGRGMAAAFALGAEAVQ 203 (326)
T ss_dssp SCEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred CCEEEECCCCCHHHHHHHHHhCCCEEE
Confidence 899988888889999999999998864
No 146
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=86.88 E-value=2 Score=34.84 Aligned_cols=54 Identities=9% Similarity=0.255 Sum_probs=40.3
Q ss_pred EEEEeCCCCCC---CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 80 LVITDYCMPGM---TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 80 lIilD~~mp~~---~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
+.+.|....+. .-+++++.+++.. ++||++..+-.+.+.+..+++.||+.+++=
T Consensus 47 i~v~d~~~~~~~~g~~~~~i~~i~~~~---~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg 103 (266)
T 2w6r_A 47 ILLTSIDRDGTKSGYDTEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLAGADKALAA 103 (266)
T ss_dssp EEEEETTTSSCSSCCCHHHHHHHGGGC---CSCEEEESCCCSTHHHHHHHHHTCSEEECC
T ss_pred EEEEecCcccCCCcccHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHHcCCcHhhhh
Confidence 55567654321 2278889998753 799999888788888999999999987653
No 147
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=86.75 E-value=7.7 Score=34.92 Aligned_cols=104 Identities=13% Similarity=0.190 Sum_probs=61.9
Q ss_pred cCcceEEEEeCC----HHHHHHHHHHhhcCC-CEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeC
Q 026239 13 ESQFHVLAVDDS----IIDRKLIERLLKTSS-YQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDY 85 (241)
Q Consensus 13 ~~~~~ILiVdd~----~~~~~~l~~~L~~~g-~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~ 85 (241)
+....+++||.. ......++.+-+..+ ..+. .+.+.+.|..+... .+|.|++++
T Consensus 266 eaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~a-------------------Gad~i~vg~ 326 (511)
T 3usb_A 266 KASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEA-------------------GANVVKVGI 326 (511)
T ss_dssp HTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHH-------------------TCSEEEECS
T ss_pred hhccceEEecccccchhhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHh-------------------CCCEEEECC
Confidence 345677777632 334445555544443 3333 46677777666532 355777643
Q ss_pred CCC-----------CCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 86 CMP-----------GMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 86 ~mp-----------~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.-. +...++++..+.......++|||.-.+-.+...+.+|+.+||+..+.
T Consensus 327 g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~v 387 (511)
T 3usb_A 327 GPGSICTTRVVAGVGVPQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVML 387 (511)
T ss_dssp SCSTTCCHHHHHCCCCCHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCccccccccccCCCCCcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhhee
Confidence 211 12345555554322111269999988888999999999999998754
No 148
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=86.66 E-value=0.71 Score=38.24 Aligned_cols=58 Identities=12% Similarity=0.363 Sum_probs=40.9
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccC------CChHHHHHHHHhcccccccCCCCHHHHHHhhHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSE------NVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHL 150 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~------~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l 150 (241)
+.+++++.+|+... ++|||+|+-. .....+.+|.++|+++++.--+.+++...++..+
T Consensus 83 ~~~~~v~~~r~~~~--~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~ 146 (271)
T 3nav_A 83 ICFELIAQIRARNP--ETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTNESQPFVAAA 146 (271)
T ss_dssp HHHHHHHHHHHHCT--TSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGGGCHHHHHHH
T ss_pred HHHHHHHHHHhcCC--CCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
Confidence 34678888887533 7999999743 3355688899999999988666666654444333
No 149
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=86.26 E-value=3.7 Score=33.58 Aligned_cols=42 Identities=21% Similarity=0.283 Sum_probs=33.6
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
.++++++|+.. ++||++=.+-.+++.+..++..|||.++.=.
T Consensus 194 ~~~i~~lr~~~---~~pi~vggGI~t~e~~~~~~~agAD~vVVGS 235 (268)
T 1qop_A 194 HHLIEKLKEYH---AAPALQGFGISSPEQVSAAVRAGAAGAISGS 235 (268)
T ss_dssp HHHHHHHHHTT---CCCEEEESSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHhcc---CCcEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 58899999853 6898876666668889998999999987643
No 150
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=86.26 E-value=3 Score=33.42 Aligned_cols=53 Identities=19% Similarity=0.230 Sum_probs=40.0
Q ss_pred EEEEeCCCCCCC---HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 80 LVITDYCMPGMT---GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 80 lIilD~~mp~~~---g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
+.+.|....+.. .+++++.+++.. ++||++...-.+.+.+..++..||+.++.
T Consensus 48 i~v~d~~~~~~~~~~~~~~i~~i~~~~---~iPvi~~Ggi~~~~~~~~~~~~Gad~V~l 103 (252)
T 1ka9_F 48 LVFLDISATHEERAILLDVVARVAERV---FIPLTVGGGVRSLEDARKLLLSGADKVSV 103 (252)
T ss_dssp EEEEECCSSTTCHHHHHHHHHHHHTTC---CSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred EEEEcCCccccCccccHHHHHHHHHhC---CCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 566676644333 245677777642 79999999988999999999999988765
No 151
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=86.10 E-value=1.2 Score=36.66 Aligned_cols=43 Identities=23% Similarity=0.315 Sum_probs=35.8
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
.+.++++++++.. ++|||+..+-.+.+.+..++.+||++++.=
T Consensus 165 ~~~~~l~~i~~~~---~iPviv~gGI~t~eda~~~~~~GAdgViVG 207 (264)
T 1xm3_A 165 LNPLNLSFIIEQA---KVPVIVDAGIGSPKDAAYAMELGADGVLLN 207 (264)
T ss_dssp SCHHHHHHHHHHC---SSCBEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred CCHHHHHHHHhcC---CCCEEEEeCCCCHHHHHHHHHcCCCEEEEc
Confidence 3478899998743 799999988888999999999999988653
No 152
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=85.91 E-value=2.5 Score=36.26 Aligned_cols=48 Identities=15% Similarity=0.117 Sum_probs=39.8
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhc---CCCEEEEECCHHHHHHHhcccCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKT---SSYQVTTVDSGSKALEFLGLHEDD 61 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~---~g~~v~~~~~~~~al~~l~~~~~d 61 (241)
-++++.|+|.|..+.+.|..+|.. ..|.+..+++.+.+.++++....|
T Consensus 20 ~~i~l~i~d~d~~Y~~~l~~y~~~~~~~~~~v~~ft~~e~~~~~~~~~~~d 70 (373)
T 3fkq_A 20 MKIKVALLDKDKEYLDRLTGVFNTKYADKLEVYSFTDEKNAIESVKEYRID 70 (373)
T ss_dssp CCEEEEEECSCHHHHHHHHHHHHHHTTTTEEEEEESCHHHHHHHHHHHTCS
T ss_pred ceEEEEEEeCCHHHHHHHHHHHhhccCCceEEEEECCHHHHHHHHhcCCCC
Confidence 368999999999999999998853 358999999999999998654433
No 153
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=85.71 E-value=4.4 Score=32.73 Aligned_cols=41 Identities=7% Similarity=0.263 Sum_probs=34.7
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.+++++++++.. ++|||+..+-.+.+.+.++++.||++++.
T Consensus 188 ~~~~i~~l~~~~---~ipvia~GGI~~~ed~~~~~~~Gadgv~v 228 (266)
T 2w6r_A 188 DTEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLAGADAALA 228 (266)
T ss_dssp CHHHHHHHGGGC---CSCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHc---CCCEEEeCCCCCHHHHHHHHHcCCHHHHc
Confidence 378999998753 78999999888889999999999998754
No 154
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=85.50 E-value=10 Score=29.62 Aligned_cols=41 Identities=17% Similarity=0.360 Sum_probs=31.1
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
.|++.++.++.... ++||++..+-. .+.+..++..|++++.
T Consensus 158 ~~~~~l~~~~~~~~--~~pvia~GGI~-~~nv~~~~~~Ga~gv~ 198 (227)
T 2tps_A 158 QGVSLIEAVRRQGI--SIPIVGIGGIT-IDNAAPVIQAGADGVS 198 (227)
T ss_dssp CTTHHHHHHHHTTC--CCCEEEESSCC-TTTSHHHHHTTCSEEE
T ss_pred cCHHHHHHHHHhCC--CCCEEEEcCCC-HHHHHHHHHcCCCEEE
Confidence 37889999987542 48998877655 7777788899998864
No 155
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=85.38 E-value=3.9 Score=34.52 Aligned_cols=53 Identities=19% Similarity=0.236 Sum_probs=39.9
Q ss_pred ccEEEEeCCCC-----CCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 78 VNLVITDYCMP-----GMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 78 ~dlIilD~~mp-----~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
+|.|+++-.-. ....+++++.++... ++|||+..+-.+.+.+..++..||+++
T Consensus 131 aD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~---~iPViaaGGI~~~~~~~~al~~GAdgV 188 (332)
T 2z6i_A 131 ADAVIAEGMEAGGHIGKLTTMTLVRQVATAI---SIPVIAAGGIADGEGAAAGFMLGAEAV 188 (332)
T ss_dssp CSCEEEECTTSSEECCSSCHHHHHHHHHHHC---SSCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCEEEEECCCCCCCCCCccHHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 55777753211 135688999998753 689998888888999999999999875
No 156
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=85.08 E-value=5.4 Score=34.25 Aligned_cols=102 Identities=16% Similarity=0.210 Sum_probs=60.8
Q ss_pred CcceEEEEe----CCHHHHHHHHHHhhcCCCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC
Q 026239 14 SQFHVLAVD----DSIIDRKLIERLLKTSSYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM 87 (241)
Q Consensus 14 ~~~~ILiVd----d~~~~~~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m 87 (241)
....++++| +.....+.++.+-+..+..|. .+.+.++|..++.. .+|.|.+.+.-
T Consensus 116 aGad~I~ld~a~G~~~~~~~~i~~i~~~~~~~Vivg~v~t~e~A~~l~~a-------------------GaD~I~VG~~~ 176 (361)
T 3khj_A 116 AGVDVIVLDSAHGHSLNIIRTLKEIKSKMNIDVIVGNVVTEEATKELIEN-------------------GADGIKVGIGP 176 (361)
T ss_dssp TTCSEEEECCSCCSBHHHHHHHHHHHHHCCCEEEEEEECSHHHHHHHHHT-------------------TCSEEEECSSC
T ss_pred cCcCeEEEeCCCCCcHHHHHHHHHHHHhcCCcEEEccCCCHHHHHHHHHc-------------------CcCEEEEecCC
Confidence 345666664 233344555555444465554 56788887766532 34577763210
Q ss_pred -----------CCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 88 -----------PGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 88 -----------p~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
.+...++++..+.......++|||.-.+-.+...+..++.+||+.+.
T Consensus 177 Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~ 234 (361)
T 3khj_A 177 GSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVM 234 (361)
T ss_dssp CTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEE
T ss_pred CcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 01234555666543211126899988887788999999999998763
No 157
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=84.86 E-value=12 Score=31.44 Aligned_cols=66 Identities=11% Similarity=0.087 Sum_probs=44.5
Q ss_pred ccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 78 VNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 78 ~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
.|++|+-..-.+.-|..+++.+.. .+|||+... ....+.+..|..+|+..|.+.++|...+..++.
T Consensus 283 adv~v~ps~~~e~~~~~~~Ea~a~-----G~PvI~~~~----~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~ 348 (406)
T 2gek_A 283 ADVYCAPHLGGESFGIVLVEAMAA-----GTAVVASDL----DAFRRVLADGDAGRLVPVDDADGMAAALIGILE 348 (406)
T ss_dssp SSEEEECCCSCCSSCHHHHHHHHH-----TCEEEECCC----HHHHHHHTTTTSSEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEecCCCCCCCchHHHHHHHc-----CCCEEEecC----CcHHHHhcCCCceEEeCCCCHHHHHHHHHHHHc
Confidence 357776532133346677777764 678775322 345566777888999999999999887777764
No 158
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=84.61 E-value=8 Score=33.06 Aligned_cols=41 Identities=29% Similarity=0.365 Sum_probs=33.6
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
..+++++.++... ++|||+..+-.+.+.+..++..||+.+.
T Consensus 195 ~~~~~l~~i~~~~---~iPViaaGGI~~~~~~~~~l~~GAd~V~ 235 (369)
T 3bw2_A 195 GLLSLLAQVREAV---DIPVVAAGGIMRGGQIAAVLAAGADAAQ 235 (369)
T ss_dssp CHHHHHHHHHHHC---SSCEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred cHHHHHHHHHHhc---CceEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 3488999998753 7899988877789999999999998753
No 159
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=84.42 E-value=8.7 Score=29.71 Aligned_cols=55 Identities=7% Similarity=0.105 Sum_probs=37.0
Q ss_pred ccEEEEeCCCC----CCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 78 VNLVITDYCMP----GMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 78 ~dlIilD~~mp----~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.|.|.++.... +..+++.++++++..+ ++||++-.+-. .+.+..++++||+.++.
T Consensus 128 ~d~i~v~~g~~g~~~~~~~~~~i~~l~~~~~--~~~i~~~gGI~-~~~~~~~~~~Gad~vvv 186 (211)
T 3f4w_A 128 ADMLAVHTGTDQQAAGRKPIDDLITMLKVRR--KARIAVAGGIS-SQTVKDYALLGPDVVIV 186 (211)
T ss_dssp CCEEEEECCHHHHHTTCCSHHHHHHHHHHCS--SCEEEEESSCC-TTTHHHHHTTCCSEEEE
T ss_pred CCEEEEcCCCcccccCCCCHHHHHHHHHHcC--CCcEEEECCCC-HHHHHHHHHcCCCEEEE
Confidence 45776652111 1135788899987643 68888766654 77888899999998754
No 160
>2v5j_A 2,4-dihydroxyhept-2-ENE-1,7-dioic acid aldolase; lyase, class II aldolase, homoprotocatechuate, aromatic DEGR aromatic hydrocarbons catabolism; 1.60A {Escherichia coli} PDB: 2v5k_A
Probab=84.13 E-value=17 Score=30.09 Aligned_cols=71 Identities=14% Similarity=0.168 Sum_probs=49.2
Q ss_pred cccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc-CCCCHHHHHHhhH
Q 026239 77 GVNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL-KPVRLSDLNKLKP 148 (241)
Q Consensus 77 ~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~-KP~~~~~L~~~~~ 148 (241)
.+|.||+|+.-...+--.+...++.... ...+++|=+...++..+..+++.|++.++. |--+.+++..++.
T Consensus 60 GaD~v~lDlEh~~~~~~~~~~~l~a~~~-~~~~~~VRv~~~d~~di~~~ld~ga~~ImlP~V~saeea~~~~~ 131 (287)
T 2v5j_A 60 GFDWLLIDGEHAPNNVQTVLTQLQAIAP-YPSQPVVRPSWNDPVQIKQLLDVGTQTLLVPMVQNADEAREAVR 131 (287)
T ss_dssp CCSEEEEESSSSSCCHHHHHHHHHHHTT-SSSEEEEECSSSCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHH
T ss_pred CCCEEEEeCCCccchHHHHHHHHHHHHh-cCCCEEEEECCCCHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHH
Confidence 4669999997665565556665654332 256777777777888899999999987543 3346777766544
No 161
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=84.12 E-value=11 Score=32.73 Aligned_cols=44 Identities=9% Similarity=0.230 Sum_probs=32.7
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.++.+..++......++|||...+-.+...+.+++.+||+.+..
T Consensus 241 ~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~i 284 (404)
T 1eep_A 241 QITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMI 284 (404)
T ss_dssp HHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred hHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhh
Confidence 45666666652211279999888888899999999999988644
No 162
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=83.82 E-value=3.1 Score=33.82 Aligned_cols=42 Identities=17% Similarity=0.310 Sum_probs=34.4
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
.+++++++++.. ++||++-.+-.+.+.+..++..||++++.=
T Consensus 189 ~~~~i~~v~~~~---~~pI~vgGGI~~~e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 189 VESLIQEVKKVT---NKPVAVGFGISKPEHVKQIAQWGADGVIIG 230 (262)
T ss_dssp HHHHHHHHHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhhc---CCeEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 556888888753 789998888777999999999999998653
No 163
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=83.68 E-value=18 Score=32.36 Aligned_cols=102 Identities=14% Similarity=0.169 Sum_probs=62.6
Q ss_pred cceEEEEe----CCHHHHHHHHHHhhcC-CCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC
Q 026239 15 QFHVLAVD----DSIIDRKLIERLLKTS-SYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM 87 (241)
Q Consensus 15 ~~~ILiVd----d~~~~~~~l~~~L~~~-g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m 87 (241)
...++++| ......+.++.+-+.. +..|. .+.+.++|..+.. ..+|.|.+.+.-
T Consensus 241 G~d~I~id~a~g~~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~-------------------aGaD~I~vg~g~ 301 (490)
T 4avf_A 241 GVDVVVVDTAHGHSKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAE-------------------AGADAVKVGIGP 301 (490)
T ss_dssp TCSEEEEECSCCSBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHH-------------------TTCSEEEECSSC
T ss_pred ccceEEecccCCcchhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHH-------------------cCCCEEEECCCC
Confidence 46677776 3334445555555544 43443 3677777766653 235677764211
Q ss_pred -----------CCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 88 -----------PGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 88 -----------p~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.+...++++..+.+.....++|||.-.+-.....+.+++.+||+....
T Consensus 302 Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~v 360 (490)
T 4avf_A 302 GSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMM 360 (490)
T ss_dssp STTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred CcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeee
Confidence 012345666666653211269999988888899999999999987643
No 164
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=83.10 E-value=2.5 Score=33.07 Aligned_cols=78 Identities=18% Similarity=0.267 Sum_probs=50.4
Q ss_pred HhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-CCCHHHHHHHHHhcCCCCCCcEE
Q 026239 34 LLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-GMTGYDLLKKIKESSSLRDIPVV 111 (241)
Q Consensus 34 ~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-~~~g~~ll~~ir~~~~~~~ipvI 111 (241)
..+..|..+. .+.+..++..... ..+|.|++ .| +..|++.++.++...+ .++||+
T Consensus 96 ~~~~~g~~~~~g~~t~~e~~~a~~-------------------~G~d~v~v---~~t~~~g~~~~~~l~~~~~-~~ipvi 152 (212)
T 2v82_A 96 RAVGYGMTVCPGCATATEAFTALE-------------------AGAQALKI---FPSSAFGPQYIKALKAVLP-SDIAVF 152 (212)
T ss_dssp HHHHTTCEEECEECSHHHHHHHHH-------------------TTCSEEEE---TTHHHHCHHHHHHHHTTSC-TTCEEE
T ss_pred HHHHcCCCEEeecCCHHHHHHHHH-------------------CCCCEEEE---ecCCCCCHHHHHHHHHhcc-CCCeEE
Confidence 3444555432 3677777765543 22557775 22 1236788888887532 158998
Q ss_pred EEccCCChHHHHHHHHhccccccc
Q 026239 112 IMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 112 ils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
+..+-+ .+.+..++++||+++..
T Consensus 153 a~GGI~-~~~i~~~~~~Ga~gv~v 175 (212)
T 2v82_A 153 AVGGVT-PENLAQWIDAGCAGAGL 175 (212)
T ss_dssp EESSCC-TTTHHHHHHHTCSEEEE
T ss_pred EeCCCC-HHHHHHHHHcCCCEEEE
Confidence 887765 77788899999998863
No 165
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=83.05 E-value=7.1 Score=30.54 Aligned_cols=42 Identities=19% Similarity=0.308 Sum_probs=34.4
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
++++++++++.. ++|||+..+-.+.+.+..++++||+.++.=
T Consensus 163 ~~~~~~~~~~~~---~ipvia~GGI~~~~~~~~~~~~Gad~v~vG 204 (223)
T 1y0e_A 163 DFQFLKDVLQSV---DAKVIAEGNVITPDMYKRVMDLGVHCSVVG 204 (223)
T ss_dssp HHHHHHHHHHHC---CSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred cHHHHHHHHhhC---CCCEEEecCCCCHHHHHHHHHcCCCEEEEC
Confidence 467888888753 689998888778999999999999988653
No 166
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=82.76 E-value=14 Score=31.57 Aligned_cols=104 Identities=13% Similarity=0.164 Sum_probs=62.1
Q ss_pred cceEEEEe----CCHHHHHHHHHHhhcC-CCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC
Q 026239 15 QFHVLAVD----DSIIDRKLIERLLKTS-SYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM 87 (241)
Q Consensus 15 ~~~ILiVd----d~~~~~~~l~~~L~~~-g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m 87 (241)
...++.++ +.....+.++.+-+.. +..|. .+.+.++|..+... .+|.|++...
T Consensus 132 g~~~i~i~~~~g~~~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~a-------------------GaD~I~v~~g- 191 (351)
T 2c6q_A 132 QVKYICLDVANGYSEHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILS-------------------GADIIKVGIG- 191 (351)
T ss_dssp TCCEEEEECSCTTBHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHT-------------------TCSEEEECSS-
T ss_pred CCCEEEEEecCCCcHHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHh-------------------CCCEEEECCC-
Confidence 35566665 3333445555554444 44443 57788888776642 3567766432
Q ss_pred CC------------CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc-ccCCC
Q 026239 88 PG------------MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF-FLKPV 138 (241)
Q Consensus 88 p~------------~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~-l~KP~ 138 (241)
++ ...+.++..+.......++|||.-.+-.+...+..++.+||+.. +-++|
T Consensus 192 ~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlalGA~~V~vG~~f 255 (351)
T 2c6q_A 192 PGSVCTTRKKTGVGYPQLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGAGADFVMLGGML 255 (351)
T ss_dssp CSTTBCHHHHHCBCCCHHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHTTCSEEEESTTT
T ss_pred CCcCcCccccCCCCccHHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHcCCCceeccHHH
Confidence 21 12334444443221112689999888889999999999999976 34454
No 167
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=82.72 E-value=18 Score=31.00 Aligned_cols=96 Identities=15% Similarity=0.129 Sum_probs=55.8
Q ss_pred cceEEEEeCC----HHHHHHHHHHhhcC-CCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC
Q 026239 15 QFHVLAVDDS----IIDRKLIERLLKTS-SYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM 87 (241)
Q Consensus 15 ~~~ILiVdd~----~~~~~~l~~~L~~~-g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m 87 (241)
...++.+|-. ....+.++.+-+.. +..|. .+.+.++|..+.. ..+|.|.+...
T Consensus 112 GvdvI~id~a~G~~~~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~-------------------aGaD~I~Vg~g- 171 (361)
T 3r2g_A 112 GADFFCVDVAHAHAKYVGKTLKSLRQLLGSRCIMAGNVATYAGADYLAS-------------------CGADIIKAGIG- 171 (361)
T ss_dssp TCCEEEEECSCCSSHHHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHH-------------------TTCSEEEECCS-
T ss_pred CCCEEEEeCCCCCcHhHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHH-------------------cCCCEEEEcCC-
Confidence 4667777622 22223333332222 44444 3677777776653 23568887533
Q ss_pred CCC------------CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 88 PGM------------TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 88 p~~------------~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
|+. ..++.+..+.... . |||.-.+-.+...+..++.+||+.+.
T Consensus 172 ~G~~~~tr~~~g~g~p~l~aI~~~~~~~---~-PVIAdGGI~~~~di~kALa~GAd~V~ 226 (361)
T 3r2g_A 172 GGSVCSTRIKTGFGVPMLTCIQDCSRAD---R-SIVADGGIKTSGDIVKALAFGADFVM 226 (361)
T ss_dssp SSSCHHHHHHHCCCCCHHHHHHHHTTSS---S-EEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred CCcCccccccCCccHHHHHHHHHHHHhC---C-CEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 321 2344444444321 2 89888888889999999999998753
No 168
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=82.57 E-value=6.2 Score=34.49 Aligned_cols=53 Identities=15% Similarity=0.120 Sum_probs=35.3
Q ss_pred ccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 78 VNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 78 ~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.|+||+-+.- +.....++..+|...+ +++||+-+. +........++||+.++.
T Consensus 69 A~~viv~~~~-~~~n~~i~~~ar~~~p--~~~Iiara~--~~~~~~~L~~~Gad~Vi~ 121 (413)
T 3l9w_A 69 AEVLINAIDD-PQTNLQLTEMVKEHFP--HLQIIARAR--DVDHYIRLRQAGVEKPER 121 (413)
T ss_dssp CSEEEECCSS-HHHHHHHHHHHHHHCT--TCEEEEEES--SHHHHHHHHHTTCSSCEE
T ss_pred cCEEEECCCC-hHHHHHHHHHHHHhCC--CCeEEEEEC--CHHHHHHHHHCCCCEEEC
Confidence 5688875432 2234566777787654 677877664 456677788999987664
No 169
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=82.15 E-value=3.8 Score=33.76 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=31.4
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
.++++++|+.. ++||++=.+-.+++.+.++ .|||+++.=.
T Consensus 191 ~~~v~~vr~~~---~~Pv~vGfGI~t~e~a~~~--~~ADgVIVGS 230 (271)
T 1ujp_A 191 KDLVRRIKART---ALPVAVGFGVSGKATAAQA--AVADGVVVGS 230 (271)
T ss_dssp HHHHHHHHTTC---CSCEEEESCCCSHHHHHHH--TTSSEEEECH
T ss_pred HHHHHHHHhhc---CCCEEEEcCCCCHHHHHHh--cCCCEEEECh
Confidence 47889998753 7899887777778888775 9999987643
No 170
>3qz6_A HPCH/HPAI aldolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.00A {Desulfitobacterium hafniense} SCOP: c.1.12.0
Probab=82.04 E-value=9.8 Score=31.00 Aligned_cols=73 Identities=15% Similarity=0.189 Sum_probs=49.6
Q ss_pred cccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc-cCCCCHHHHHHhhHHH
Q 026239 77 GVNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF-LKPVRLSDLNKLKPHL 150 (241)
Q Consensus 77 ~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l-~KP~~~~~L~~~~~~l 150 (241)
.+|.||+|+.-...+.-.+...++.... ...++++=....+...+..+++.|+++++ +|--+.+++..+...+
T Consensus 37 g~D~vilDlEhav~~~~k~~~~l~a~~~-~~~~~~VRVn~~~~~di~~~ld~G~~gI~lP~v~saed~~~~~~~~ 110 (261)
T 3qz6_A 37 GLDYFIVDCEHAAYTFREINHLVSVAKN-AGVSVLVRIPQVDRAHVQRLLDIGAEGFMIPGVQSAETMRETVRLA 110 (261)
T ss_dssp TCSEEEEESSSSCCCHHHHHHHHHHHHH-HTCEEEEECSSCCHHHHHHHHHHTCCEEEETTCCSHHHHHHHHHHH
T ss_pred CcCEEEEeccCCCCCHHHHHHHHHHHhh-cCCeEEEEeCCCCHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHHh
Confidence 3669999998877766666666654221 13455555555677889999999998764 4445778887665554
No 171
>3rht_A (gatase1)-like protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.83A {Planctomyces limnophilus}
Probab=80.85 E-value=0.48 Score=39.02 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=26.3
Q ss_pred cceEEEEeCC--HHHHHHHHHHhhcCCCEEEEECC
Q 026239 15 QFHVLAVDDS--IIDRKLIERLLKTSSYQVTTVDS 47 (241)
Q Consensus 15 ~~~ILiVdd~--~~~~~~l~~~L~~~g~~v~~~~~ 47 (241)
+.+||||+++ +.....+..+|+..||.|+..+.
T Consensus 4 m~~vLiV~g~~~~~~a~~l~~aL~~~g~~V~~i~~ 38 (259)
T 3rht_A 4 MTRVLYCGDTSLETAAGYLAGLMTSWQWEFDYIPS 38 (259)
T ss_dssp --CEEEEESSCTTTTHHHHHHHHHHTTCCCEEECT
T ss_pred CceEEEECCCCchhHHHHHHHHHHhCCceEEEecc
Confidence 4799999988 66778889999999999987653
No 172
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=80.77 E-value=15 Score=27.36 Aligned_cols=106 Identities=11% Similarity=0.098 Sum_probs=66.6
Q ss_pred cceEEEEeCCH-HHHHHHHHHhhcCCCEEEE-EC--CHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 15 QFHVLAVDDSI-IDRKLIERLLKTSSYQVTT-VD--SGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 15 ~~~ILiVdd~~-~~~~~l~~~L~~~g~~v~~-~~--~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
.++++++.+.. .....+..+++..+ .|.. .. +.++...++.. .|++|+-... +.
T Consensus 70 ~~~l~i~G~~~~~~~~~l~~~~~~~~-~v~~~~g~~~~~~~~~~~~~--------------------ad~~l~ps~~-e~ 127 (200)
T 2bfw_A 70 EMRFIIIGKGDPELEGWARSLEEKHG-NVKVITEMLSREFVRELYGS--------------------VDFVIIPSYF-EP 127 (200)
T ss_dssp GEEEEEECCBCHHHHHHHHHHHHHCT-TEEEECSCCCHHHHHHHHTT--------------------CSEEEECCSC-CS
T ss_pred CeEEEEECCCChHHHHHHHHHHHhcC-CEEEEeccCCHHHHHHHHHH--------------------CCEEEECCCC-CC
Confidence 46777777644 24555666666666 4554 33 44466666532 3577775443 33
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
-|..+++.+.. .+|||+.. . ....+.+ .|..+|+..|-+.++|...+..++.
T Consensus 128 ~~~~~~Ea~a~-----G~PvI~~~-~---~~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 128 FGLVALEAMCL-----GAIPIASA-V---GGLRDII-TNETGILVKAGDPGELANAILKALE 179 (200)
T ss_dssp SCHHHHHHHHT-----TCEEEEES-C---HHHHHHC-CTTTCEEECTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHC-----CCCEEEeC-C---CChHHHc-CCCceEEecCCCHHHHHHHHHHHHh
Confidence 46777777764 67877542 2 2334445 6788999999999999887777665
No 173
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=80.23 E-value=9.9 Score=30.28 Aligned_cols=56 Identities=14% Similarity=0.345 Sum_probs=39.5
Q ss_pred cccEEEEeCCCCCCCH-------HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 77 GVNLVITDYCMPGMTG-------YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 77 ~~dlIilD~~mp~~~g-------~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.+|.|++....||.+| ++-++++|+... +++|. +.+.-..+.+..+.++||+.++.
T Consensus 134 ~~D~Vl~msv~pGf~Gq~f~~~~l~ki~~lr~~~~--~~~I~-VdGGI~~~t~~~~~~aGAd~~Vv 196 (228)
T 3ovp_A 134 QIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFP--SLDIE-VDGGVGPDTVHKCAEAGANMIVS 196 (228)
T ss_dssp GCSEEEEESSCTTTCSCCCCGGGHHHHHHHHHHCT--TCEEE-EESSCSTTTHHHHHHHTCCEEEE
T ss_pred cCCeEEEeeecCCCCCcccCHHHHHHHHHHHHhcC--CCCEE-EeCCcCHHHHHHHHHcCCCEEEE
Confidence 3678888777787665 455777777543 56655 44555678888999999998654
No 174
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=80.15 E-value=5.1 Score=32.02 Aligned_cols=63 Identities=16% Similarity=0.318 Sum_probs=44.9
Q ss_pred EEEEeCCCCCC-C--HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc------CCCCHHHHHH
Q 026239 80 LVITDYCMPGM-T--GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL------KPVRLSDLNK 145 (241)
Q Consensus 80 lIilD~~mp~~-~--g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~------KP~~~~~L~~ 145 (241)
+++.+..-.++ . .+++++++++.. ++|||...+-.+.+.+.++++.||++++. .|+++.++.+
T Consensus 169 i~~~~~~~~g~~~g~~~~~i~~l~~~~---~ipvia~GGI~~~~d~~~~~~~Gadgv~vgsal~~~~~~~~~~~~ 240 (252)
T 1ka9_F 169 ILLTSMDRDGTKEGYDLRLTRMVAEAV---GVPVIASGGAGRMEHFLEAFQAGAEAALAASVFHFGEIPIPKLKR 240 (252)
T ss_dssp EEEEETTTTTTCSCCCHHHHHHHHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHH
T ss_pred EEEecccCCCCcCCCCHHHHHHHHHHc---CCCEEEeCCCCCHHHHHHHHHCCCHHHHHHHHHHcCCCCHHHHHH
Confidence 55565543222 2 389999999764 78999998888888999999999988753 4566665543
No 175
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=80.14 E-value=5.8 Score=27.09 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=26.4
Q ss_pred EEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhc
Q 026239 19 LAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLG 56 (241)
Q Consensus 19 LiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~ 56 (241)
|+-|.|..-.+.+.+-+++.||.|.-+.+.++|+..++
T Consensus 81 llqdqdeneleefkrkiesqgyevrkvtddeealkivr 118 (134)
T 2lci_A 81 LLQDQDENELEEFKRKIESQGYEVRKVTDDEEALKIVR 118 (134)
T ss_dssp EEECSCHHHHHHHHHHHHTTTCEEEEECCHHHHHHHHH
T ss_pred EeecCchhHHHHHHHHHHhCCeeeeecCChHHHHHHHH
Confidence 44455555566666667777888888888888887664
No 176
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=80.09 E-value=4.3 Score=31.78 Aligned_cols=55 Identities=11% Similarity=0.051 Sum_probs=38.4
Q ss_pred cccEEEEeCCCCCC--------CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 77 GVNLVITDYCMPGM--------TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 77 ~~dlIilD~~mp~~--------~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
..|.|+++-..|.. -|++.++.++.... .++|||.+.+-+ .+.+..+++.|++++
T Consensus 107 GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~-~~iPviaiGGI~-~~nv~~~~~~Ga~gV 169 (210)
T 3ceu_A 107 FYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKI-IDSKVMALGGIN-EDNLLEIKDFGFGGA 169 (210)
T ss_dssp GSSEEEECCCC---------CCCCHHHHHHHHHTTC-SSTTEEEESSCC-TTTHHHHHHTTCSEE
T ss_pred CCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcC-CCCCEEEECCCC-HHHHHHHHHhCCCEE
Confidence 46788877554422 36788888886420 278999887755 677888999999876
No 177
>2vws_A YFAU, 2-keto-3-deoxy sugar aldolase; lyase, escherichia coli K-12 protein YFAU, 2-keto-3-deoxy SU aldolase, degradation of homoprotocatechuate; 1.39A {Escherichia coli} PDB: 2vwt_A
Probab=80.07 E-value=23 Score=28.84 Aligned_cols=72 Identities=17% Similarity=0.147 Sum_probs=48.7
Q ss_pred cccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc-cCCCCHHHHHHhhHH
Q 026239 77 GVNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF-LKPVRLSDLNKLKPH 149 (241)
Q Consensus 77 ~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l-~KP~~~~~L~~~~~~ 149 (241)
.+|.||+|+.-...+.-.+...++.... ...+++|=+...++..+..+++.|+++++ +|--+.+++..++..
T Consensus 39 GaD~v~lDlE~~~~~~~~~~~~~~a~~~-~~~~~~VRv~~~~~~~i~~~l~~g~~~I~~P~V~s~ee~~~~~~~ 111 (267)
T 2vws_A 39 GYDWLLIDGEHAPNTIQDLYHQLQAVAP-YASQPVIRPVEGSKPLIKQVLDIGAQTLLIPMVDTAEQARQVVSA 111 (267)
T ss_dssp CCSEEEEETTTSCCCHHHHHHHHHHHTT-SSSEEEEECSSCCHHHHHHHHHTTCCEEEECCCCSHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHh-CCCcEEEEeCCCCHHHHHHHHHhCCCEEEeCCCCCHHHHHHHHHH
Confidence 4669999987655555555555554332 25667776667778889999999998754 344467777665544
No 178
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=80.04 E-value=6.5 Score=31.44 Aligned_cols=54 Identities=9% Similarity=0.257 Sum_probs=40.6
Q ss_pred EEEEeCCCCC---CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 80 LVITDYCMPG---MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 80 lIilD~~mp~---~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
|.+.|..-.+ ...+++++.|++.. ++||++-.+-.+.+.+..+++.||+..++=
T Consensus 52 i~v~d~~~~~~~~~~~~~~i~~i~~~~---~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig 108 (247)
T 3tdn_A 52 ILLTSIDRDGTKSGYDTEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLRGADKVSIN 108 (247)
T ss_dssp EEEEETTTTTCSSCCCHHHHHHHGGGC---CSCEEEESCCCSHHHHHHHHHTTCSEECCS
T ss_pred EEEEecCcccCCCcccHHHHHHHHHhC---CCCEEEeCCCCCHHHHHHHHHcCCCeeehh
Confidence 5566764321 22378999998764 799999888888899999999999887643
No 179
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=79.79 E-value=14 Score=26.39 Aligned_cols=53 Identities=13% Similarity=0.276 Sum_probs=32.2
Q ss_pred cccEEEEeCCCCCC-CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 77 GVNLVITDYCMPGM-TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 77 ~~dlIilD~~mp~~-~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
..|+||+-+ |+. ....++..++...+ .++||+... +........++|++..+.
T Consensus 71 ~ad~vi~~~--~~~~~n~~~~~~a~~~~~--~~~iiar~~--~~~~~~~l~~~G~d~vi~ 124 (140)
T 3fwz_A 71 CAKWLILTI--PNGYEAGEIVASARAKNP--DIEIIARAH--YDDEVAYITERGANQVVM 124 (140)
T ss_dssp GCSEEEECC--SCHHHHHHHHHHHHHHCS--SSEEEEEES--SHHHHHHHHHTTCSEEEE
T ss_pred cCCEEEEEC--CChHHHHHHHHHHHHHCC--CCeEEEEEC--CHHHHHHHHHCCCCEEEC
Confidence 456888743 332 23345666776544 667776553 456666777899976553
No 180
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=79.48 E-value=7.8 Score=32.98 Aligned_cols=110 Identities=16% Similarity=0.124 Sum_probs=56.8
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCE----------EEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEe
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQ----------VTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITD 84 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~----------v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD 84 (241)
..+++||.+.+.....+..+++..|.. |...+...+...++. ..|++++-
T Consensus 225 ~~~lvivG~g~~~~~~l~~~~~~~gl~~~~~~~~~~~v~~~~~~~dl~~~y~--------------------~aDv~vl~ 284 (374)
T 2xci_A 225 SLKLILVPRHIENAKIFEKKARDFGFKTSFFENLEGDVILVDRFGILKELYP--------------------VGKIAIVG 284 (374)
T ss_dssp TCEEEEEESSGGGHHHHHHHHHHTTCCEEETTCCCSSEEECCSSSCHHHHGG--------------------GEEEEEEC
T ss_pred CcEEEEECCCHHHHHHHHHHHHHCCCceEEecCCCCcEEEECCHHHHHHHHH--------------------hCCEEEEC
Confidence 467777777765544566666655543 333332234344442 24576663
Q ss_pred CCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCC-hHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 85 YCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENV-PSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 85 ~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~-~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
-..-+.-|..+++.+.. .+|||.-+...+ .+.+...... +++..+-+.++|...+..++.
T Consensus 285 ss~~e~gg~~~lEAmA~-----G~PVI~~~~~~~~~e~~~~~~~~---G~l~~~~d~~~La~ai~~ll~ 345 (374)
T 2xci_A 285 GTFVNIGGHNLLEPTCW-----GIPVIYGPYTHKVNDLKEFLEKE---GAGFEVKNETELVTKLTELLS 345 (374)
T ss_dssp SSSSSSCCCCCHHHHTT-----TCCEEECSCCTTSHHHHHHHHHT---TCEEECCSHHHHHHHHHHHHH
T ss_pred CcccCCCCcCHHHHHHh-----CCCEEECCCccChHHHHHHHHHC---CCEEEeCCHHHHHHHHHHHHh
Confidence 22222223445555442 689985322222 3322222233 456666788888777666654
No 181
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=79.41 E-value=15 Score=32.88 Aligned_cols=39 Identities=10% Similarity=0.175 Sum_probs=31.9
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
.+.++..++... ++|||...+-.+...+.+++.+||+..
T Consensus 346 ~~~~~~~~~~~~---~ipVia~GGI~~~~di~kala~GAd~V 384 (514)
T 1jcn_A 346 AVYKVAEYARRF---GVPIIADGGIQTVGHVVKALALGASTV 384 (514)
T ss_dssp HHHHHHHHHGGG---TCCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHhhC---CCCEEEECCCCCHHHHHHHHHcCCCee
Confidence 467777777643 699998888888999999999999875
No 182
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=78.33 E-value=11 Score=28.53 Aligned_cols=80 Identities=15% Similarity=0.169 Sum_probs=40.3
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhh--cCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLK--TSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~--~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
+....+|++||-|+... +..++. ..++.+..+.. ....+.+... ...||+||+|.. |+
T Consensus 27 a~~g~~vlliD~D~~~~--~~~~~~~~~~~~~~~~~~~-~~l~~~l~~l----------------~~~yD~viiD~~-~~ 86 (206)
T 4dzz_A 27 SRSGYNIAVVDTDPQMS--LTNWSKAGKAAFDVFTAAS-EKDVYGIRKD----------------LADYDFAIVDGA-GS 86 (206)
T ss_dssp HHTTCCEEEEECCTTCH--HHHHHTTSCCSSEEEECCS-HHHHHTHHHH----------------TTTSSEEEEECC-SS
T ss_pred HHCCCeEEEEECCCCCC--HHHHHhcCCCCCcEEecCc-HHHHHHHHHh----------------cCCCCEEEEECC-CC
Confidence 34568999999875432 333443 23456665543 2222222211 124789999963 33
Q ss_pred CCHHHHHHHHHhcCCCCCCcEEEEccC
Q 026239 90 MTGYDLLKKIKESSSLRDIPVVIMSSE 116 (241)
Q Consensus 90 ~~g~~ll~~ir~~~~~~~ipvIils~~ 116 (241)
. +......+... +.-|+++...
T Consensus 87 ~-~~~~~~~l~~a----d~viiv~~~~ 108 (206)
T 4dzz_A 87 L-SVITSAAVMVS----DLVIIPVTPS 108 (206)
T ss_dssp S-SHHHHHHHHHC----SEEEEEECSC
T ss_pred C-CHHHHHHHHHC----CEEEEEecCC
Confidence 3 33444444432 4444444443
No 183
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=77.83 E-value=14 Score=30.36 Aligned_cols=100 Identities=13% Similarity=0.175 Sum_probs=58.1
Q ss_pred ceEE-EEeCCHHHHHHHHHHhhcCCCEEE-EE-C-CHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 16 FHVL-AVDDSIIDRKLIERLLKTSSYQVT-TV-D-SGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 16 ~~IL-iVdd~~~~~~~l~~~L~~~g~~v~-~~-~-~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
...+ +.|=.......+...++..|..+. .+ . +..+-+..+.....+ .|-+ ....|.+
T Consensus 126 vdGvIipDlp~ee~~~~~~~~~~~gl~~I~lvap~t~~eri~~i~~~~~g------------------fiY~-vs~~GvT 186 (271)
T 3nav_A 126 VDSVLIADVPTNESQPFVAAAEKFGIQPIFIAPPTASDETLRAVAQLGKG------------------YTYL-LSRAGVT 186 (271)
T ss_dssp CCEEEETTSCGGGCHHHHHHHHHTTCEEEEEECTTCCHHHHHHHHHHCCS------------------CEEE-CCCC---
T ss_pred CCEEEECCCCHHHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHHCCC------------------eEEE-EeccCCC
Confidence 4444 444334445556677777887643 33 2 334555555433322 3322 1222322
Q ss_pred H---------HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 92 G---------YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 92 g---------~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
| .++++++|+.. ++||++=.+-.+++.+..++..|||+++.-.
T Consensus 187 G~~~~~~~~~~~~v~~vr~~~---~~Pv~vGfGIst~e~~~~~~~~gADgvIVGS 238 (271)
T 3nav_A 187 GAETKANMPVHALLERLQQFD---APPALLGFGISEPAQVKQAIEAGAAGAISGS 238 (271)
T ss_dssp -----CCHHHHHHHHHHHHTT---CCCEEECSSCCSHHHHHHHHHTTCSEEEESH
T ss_pred CcccCCchhHHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 2 46788888753 6899876666678888779999999998754
No 184
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=77.64 E-value=7.2 Score=32.95 Aligned_cols=107 Identities=20% Similarity=0.194 Sum_probs=57.9
Q ss_pred hhcCcceEEEEeCCHHHH-HHHHHHhhcCCCEEE-EEC-CHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC
Q 026239 11 VAESQFHVLAVDDSIIDR-KLIERLLKTSSYQVT-TVD-SGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM 87 (241)
Q Consensus 11 ~~~~~~~ILiVdd~~~~~-~~l~~~L~~~g~~v~-~~~-~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m 87 (241)
+...+++|.||.--..-. ..+..+....+++++ +++ +.+.+-.+.... .+.. ..|+
T Consensus 23 ~~m~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~------------------g~~~-~~~~-- 81 (350)
T 3rc1_A 23 ANANPIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERF------------------GGEP-VEGY-- 81 (350)
T ss_dssp ---CCEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHH------------------CSEE-EESH--
T ss_pred CCCCceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHc------------------CCCC-cCCH--
Confidence 344579999999887766 345555454478776 444 333333333211 1111 1221
Q ss_pred CCCCHHHHHHHHHhcCCCCCCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 88 PGMTGYDLLKKIKESSSLRDIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 88 p~~~g~~ll~~ir~~~~~~~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
-+++ .. .++-+|+++.. ...+.+..|+++|..=|+-||+ +.++..++....
T Consensus 82 -----~~ll----~~---~~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~ea~~l~~~a 136 (350)
T 3rc1_A 82 -----PALL----ER---DDVDAVYVPLPAVLHAEWIDRALRAGKHVLAEKPLTTDRPQAERLFAVA 136 (350)
T ss_dssp -----HHHH----TC---TTCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHH
T ss_pred -----HHHh----cC---CCCCEEEECCCcHHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHH
Confidence 1222 21 13444544433 3456677889999998899996 556666555443
No 185
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=77.54 E-value=7.5 Score=30.76 Aligned_cols=56 Identities=18% Similarity=0.264 Sum_probs=39.9
Q ss_pred cccEEEEeCCCCCCC-------HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 77 GVNLVITDYCMPGMT-------GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 77 ~~dlIilD~~mp~~~-------g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
..|.|+++...|+.+ +++.++++++... ++||++..+- +.+.+..+.++|||.++.
T Consensus 138 ~~d~vl~~sv~pg~~g~~~~~~~l~~i~~~~~~~~--~~pi~v~GGI-~~~ni~~~~~aGaD~vvv 200 (228)
T 1h1y_A 138 PVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYP--SLDIEVDGGL-GPSTIDVAASAGANCIVA 200 (228)
T ss_dssp CCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT--TSEEEEESSC-STTTHHHHHHHTCCEEEE
T ss_pred CCCEEEEEeecCCCCcccCCHHHHHHHHHHHHhcC--CCCEEEECCc-CHHHHHHHHHcCCCEEEE
Confidence 578999988777643 3667777777542 6787766554 346777888999998754
No 186
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=77.30 E-value=18 Score=32.34 Aligned_cols=103 Identities=17% Similarity=0.193 Sum_probs=61.2
Q ss_pred CcceEEEEe----CCHHHHHHHHHHhhcC-CCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC
Q 026239 14 SQFHVLAVD----DSIIDRKLIERLLKTS-SYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC 86 (241)
Q Consensus 14 ~~~~ILiVd----d~~~~~~~l~~~L~~~-g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~ 86 (241)
....++++| +.....+.++.+-+.. +..|. .+.+.+.|..++. ..+|.|++.+.
T Consensus 242 aG~d~I~id~a~g~~~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~-------------------aGaD~I~Vg~g 302 (496)
T 4fxs_A 242 AGVDVLLIDSSHGHSEGVLQRIRETRAAYPHLEIIGGNVATAEGARALIE-------------------AGVSAVKVGIG 302 (496)
T ss_dssp TTCSEEEEECSCTTSHHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHH-------------------HTCSEEEECSS
T ss_pred ccCceEEeccccccchHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHH-------------------hCCCEEEECCC
Confidence 346677776 3334445555555544 33332 4667777666553 23567877532
Q ss_pred CC-----------CCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 87 MP-----------GMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 87 mp-----------~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
-. +...+.++..+.......++|||.-.+-.+...+.+++.+||+..+.
T Consensus 303 ~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~i 362 (496)
T 4fxs_A 303 PGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMV 362 (496)
T ss_dssp CCTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred CCcCcccccccCCCccHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEe
Confidence 11 12334555555532111268999988888899999999999987644
No 187
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=77.18 E-value=12 Score=29.65 Aligned_cols=63 Identities=21% Similarity=0.317 Sum_probs=44.8
Q ss_pred EEEEeCCCCCC---CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHh---ccccc------ccCCCCHHHHHH
Q 026239 80 LVITDYCMPGM---TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEE---GAEEF------FLKPVRLSDLNK 145 (241)
Q Consensus 80 lIilD~~mp~~---~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~---Ga~~~------l~KP~~~~~L~~ 145 (241)
+++++....+. -++++++++++.. ++|||+-.+-...+.+.++++. ||+++ +..|+.+.++.+
T Consensus 166 i~~~~~~~~~~~~g~~~~~~~~l~~~~---~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG~al~~~~~~~~~~~~ 240 (244)
T 2y88_A 166 FVVTDITKDGTLGGPNLDLLAGVADRT---DAPVIASGGVSSLDDLRAIATLTHRGVEGAIVGKALYARRFTLPQALA 240 (244)
T ss_dssp EEEEETTTTTTTSCCCHHHHHHHHTTC---SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHH
T ss_pred EEEEecCCccccCCCCHHHHHHHHHhC---CCCEEEECCCCCHHHHHHHHhhccCCCCEEEEcHHHHCCCcCHHHHHH
Confidence 55666554322 2578899998642 7999998888888999999988 99875 345666655543
No 188
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=77.03 E-value=3.3 Score=29.76 Aligned_cols=113 Identities=18% Similarity=0.225 Sum_probs=50.9
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCc---ccccccEEEEeCCCCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMH---QEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~---~~~~~dlIilD~~mp~~~ 91 (241)
+.+|+|+.-.. +-..+...|...|+.|+.++...+.++.+.........+....+... .-..+|+||+-.. .+..
T Consensus 6 ~~~v~I~G~G~-iG~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~-~~~~ 83 (141)
T 3llv_A 6 RYEYIVIGSEA-AGVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGS-DDEF 83 (141)
T ss_dssp CCSEEEECCSH-HHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCS-CHHH
T ss_pred CCEEEEECCCH-HHHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecC-CHHH
Confidence 34677776654 34445555555677776665544444443221100000000000000 0124678887443 1112
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
...++..++... ...||+.+.. ........+.|++..+
T Consensus 84 n~~~~~~a~~~~---~~~iia~~~~--~~~~~~l~~~G~~~vi 121 (141)
T 3llv_A 84 NLKILKALRSVS---DVYAIVRVSS--PKKKEEFEEAGANLVV 121 (141)
T ss_dssp HHHHHHHHHHHC---CCCEEEEESC--GGGHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHhC---CceEEEEEcC--hhHHHHHHHcCCCEEE
Confidence 344555556543 3455554433 3444556788885443
No 189
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=76.33 E-value=16 Score=29.95 Aligned_cols=42 Identities=14% Similarity=0.231 Sum_probs=33.0
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
.++++++|+.. ++||++=.+-.+++.+..++..|||+++.-.
T Consensus 195 ~~~v~~vr~~~---~~pv~vGfGI~~~e~~~~~~~~gADgvVVGS 236 (267)
T 3vnd_A 195 ENILTQLAEFN---APPPLLGFGIAEPEQVRAAIKAGAAGAISGS 236 (267)
T ss_dssp HHHHHHHHTTT---CCCEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHHhc---CCCEEEECCcCCHHHHHHHHHcCCCEEEECH
Confidence 56788888753 7898876666678888779999999998764
No 190
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=76.30 E-value=9.9 Score=29.42 Aligned_cols=35 Identities=14% Similarity=0.200 Sum_probs=27.7
Q ss_pred eEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHH
Q 026239 17 HVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKA 51 (241)
Q Consensus 17 ~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~a 51 (241)
+|+|||=..-....+.+.|+..|+.++++.+.++.
T Consensus 4 ~I~iiD~g~~n~~si~~al~~~G~~~~v~~~~~~l 38 (211)
T 4gud_A 4 NVVIIDTGCANISSVKFAIERLGYAVTISRDPQVV 38 (211)
T ss_dssp CEEEECCCCTTHHHHHHHHHHTTCCEEEECCHHHH
T ss_pred EEEEEECCCChHHHHHHHHHHCCCEEEEECCHHHH
Confidence 69999966555667888899999999988876653
No 191
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=76.27 E-value=2.3 Score=34.55 Aligned_cols=53 Identities=17% Similarity=0.327 Sum_probs=34.0
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChH---HHHHHHHhcccccccCCCCHHHHHHhhH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPS---RISRCLEEGAEEFFLKPVRLSDLNKLKP 148 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~---~~~~~l~~Ga~~~l~KP~~~~~L~~~~~ 148 (241)
++++++.+|+. .++|+++++..+ +. .+..+.++|+++++.-....+++.+++.
T Consensus 82 ~~~~i~~ir~~---~~~Pv~~m~~~~-~~~~~~~~~a~~aGadgv~v~d~~~~~~~~~~~ 137 (262)
T 1rd5_A 82 VLEMLREVTPE---LSCPVVLLSYYK-PIMFRSLAKMKEAGVHGLIVPDLPYVAAHSLWS 137 (262)
T ss_dssp HHHHHHHHGGG---CSSCEEEECCSH-HHHSCCTHHHHHTTCCEEECTTCBTTTHHHHHH
T ss_pred HHHHHHHHHhc---CCCCEEEEecCc-HHHHHHHHHHHHcCCCEEEEcCCChhhHHHHHH
Confidence 56778888875 278999886322 11 1234889999999885555444444443
No 192
>1qb3_A Cyclin-dependent kinases regulatory subunit; cell cycle mutagenesis domain swapping, cyclin-dependent KIN cycle; 3.00A {Saccharomyces cerevisiae} SCOP: d.97.1.1
Probab=75.60 E-value=0.52 Score=34.87 Aligned_cols=7 Identities=14% Similarity=0.055 Sum_probs=3.5
Q ss_pred cccEEEE
Q 026239 77 GVNLVIT 83 (241)
Q Consensus 77 ~~dlIil 83 (241)
.|.-||+
T Consensus 40 EYRHViL 46 (150)
T 1qb3_A 40 EYRHVML 46 (150)
T ss_dssp EEEEEEC
T ss_pred eEEEEec
Confidence 4445554
No 193
>1dxe_A 2-dehydro-3-deoxy-galactarate aldolase; class II aldolase; 1.8A {Escherichia coli} SCOP: c.1.12.5 PDB: 1dxf_A
Probab=75.44 E-value=30 Score=27.82 Aligned_cols=72 Identities=14% Similarity=0.091 Sum_probs=48.0
Q ss_pred cccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc-cCCCCHHHHHHhhHH
Q 026239 77 GVNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF-LKPVRLSDLNKLKPH 149 (241)
Q Consensus 77 ~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l-~KP~~~~~L~~~~~~ 149 (241)
.+|.||+|+.-...+--++...++.... ...+++|=+...++..+..+++.|+++++ +|--+.+++..+...
T Consensus 40 gaD~v~lDlEd~p~~~~~a~~~~~~~~~-~~~~~~VRv~~~~~~~i~~~l~~g~~gI~~P~V~s~~ev~~~~~~ 112 (256)
T 1dxe_A 40 GFDWLVLDGEHAPNDISTFIPQLMALKG-SASAPVVRVPTNEPVIIKRLLDIGFYNFLIPFVETKEEAELAVAS 112 (256)
T ss_dssp CCSEEEEESSSSSCCHHHHHHHHHHTTT-CSSEEEEECSSSCHHHHHHHHHTTCCEEEESCCCSHHHHHHHHHT
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHh-CCCcEEEECCCCCHHHHHHHHhcCCceeeecCcCCHHHHHHHHHH
Confidence 4669999987654444444444443322 35678777777888889999999998854 444577887655443
No 194
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=75.32 E-value=13 Score=30.75 Aligned_cols=94 Identities=12% Similarity=0.071 Sum_probs=56.3
Q ss_pred EEEEeCCHHH----HHHHHHHhhcCC--CEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 18 VLAVDDSIID----RKLIERLLKTSS--YQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 18 ILiVdd~~~~----~~~l~~~L~~~g--~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
+||-|++... ...++..-+..+ .-...+++.+++.+.+.. ..|+|.+|-.-| .+
T Consensus 168 vlikdnHi~~ag~i~~av~~ar~~~~~~~I~Vev~t~eea~eal~a-------------------GaD~I~LDn~~~-~~ 227 (284)
T 1qpo_A 168 ALIKDNHVAAAGSVVDALRAVRNAAPDLPCEVEVDSLEQLDAVLPE-------------------KPELILLDNFAV-WQ 227 (284)
T ss_dssp EEECHHHHHHHSSHHHHHHHHHHHCTTSCEEEEESSHHHHHHHGGG-------------------CCSEEEEETCCH-HH
T ss_pred hcccHhHHHHcCCHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHc-------------------CCCEEEECCCCH-HH
Confidence 5666665433 223333323333 233477889999888752 356999997322 22
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
-.+.++.++... +++ .|..|+.-+.+.+....+.|+|.|.
T Consensus 228 ~~~~v~~l~~~~--~~v-~ieaSGGIt~~~i~~~a~tGVD~is 267 (284)
T 1qpo_A 228 TQTAVQRRDSRA--PTV-MLESSGGLSLQTAATYAETGVDYLA 267 (284)
T ss_dssp HHHHHHHHHHHC--TTC-EEEEESSCCTTTHHHHHHTTCSEEE
T ss_pred HHHHHHHhhccC--CCe-EEEEECCCCHHHHHHHHhcCCCEEE
Confidence 234455555432 244 5567777788889999999987653
No 195
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=75.19 E-value=6.4 Score=31.57 Aligned_cols=96 Identities=10% Similarity=0.149 Sum_probs=57.0
Q ss_pred HHhhcCCCEEEE--ECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-----CCCHHHHHHHHHhcCCC
Q 026239 33 RLLKTSSYQVTT--VDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-----GMTGYDLLKKIKESSSL 105 (241)
Q Consensus 33 ~~L~~~g~~v~~--~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-----~~~g~~ll~~ir~~~~~ 105 (241)
..|+..|+.+.. +.+|...+..+... ++|.|=+|-.+- +.....+++.|......
T Consensus 146 ~~l~~~G~~ialDdfG~g~ssl~~L~~l------------------~~d~iKiD~~~v~~~~~~~~~~~~~~~i~~~a~~ 207 (259)
T 3s83_A 146 KTLRDAGAGLALDDFGTGFSSLSYLTRL------------------PFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQD 207 (259)
T ss_dssp HHHHHHTCEEEEECC---CHHHHHHHHS------------------CCCEEEECHHHHHHTTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEECCCCCchhHHHHHhC------------------CCCEEEECHHHHhhhhcCchHHHHHHHHHHHHHH
Confidence 446677887764 45666777777543 455888885331 22233445544432211
Q ss_pred CCCcEEEEccCCChHHHHHHHHhccc---cc-ccCCCCHHHHHHhh
Q 026239 106 RDIPVVIMSSENVPSRISRCLEEGAE---EF-FLKPVRLSDLNKLK 147 (241)
Q Consensus 106 ~~ipvIils~~~~~~~~~~~l~~Ga~---~~-l~KP~~~~~L~~~~ 147 (241)
.++.|| ..+-.+.+....+.+.|++ || +.||...+++...+
T Consensus 208 ~g~~vi-aeGVEt~~~~~~l~~lG~~~~QG~~~~~p~~~~~~~~~l 252 (259)
T 3s83_A 208 LDLEVV-AEGVENAEMAHALQSLGCDYGQGFGYAPALSPQEAEVYL 252 (259)
T ss_dssp TTCEEE-ECCCCSHHHHHHHHHHTCCEECBTTTBCCBCHHHHHHHH
T ss_pred CCCeEE-EEeCCCHHHHHHHHhcCCCEeecCcccCCCCHHHHHHHH
Confidence 245554 5566677778888899986 33 67999999886544
No 196
>3o07_A Pyridoxine biosynthesis protein SNZ1; (beta/alpha)8-barrel, pyridoxal 5-phosphate synthase, PLP G3 SNO1, biosynthetic protein; HET: 1GP; 1.80A {Saccharomyces cerevisiae} PDB: 3o06_A 3o05_A* 3fem_A
Probab=74.94 E-value=2.5 Score=35.07 Aligned_cols=51 Identities=24% Similarity=0.381 Sum_probs=37.5
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEc--cCCChHHHHHHHHhccccccc-----CCCCHHHHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMS--SENVPSRISRCLEEGAEEFFL-----KPVRLSDLNK 145 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils--~~~~~~~~~~~l~~Ga~~~l~-----KP~~~~~L~~ 145 (241)
.|++++.+++.. ++|||+++ +-.+++.+..++..|+++++. +.-++....+
T Consensus 186 d~elI~~Ike~~---~IPVV~IAnGGI~TpedA~~~le~GaDGVmVGrAI~~s~DP~~~Ak 243 (291)
T 3o07_A 186 PVSLLKDVLEKG---KLPVVNFAAGGVATPADAALLMQLGCDGVFVGSGIFKSSNPVRLAT 243 (291)
T ss_dssp CHHHHHHHHHHT---SCSSCEEBCSSCCSHHHHHHHHHTTCSCEEECGGGGGSSCHHHHHH
T ss_pred CHHHHHHHHHcc---CCCEEEecCCCCCCHHHHHHHHHhCCCEEEEchHHhCCCCHHHHHH
Confidence 488999999863 78998873 334689999999999999854 4444555543
No 197
>3l4e_A Uncharacterized peptidase LMO0363; hypothetical protein LMO0363, csgid, similar to peptidase E, hydrolase, protease, serine protease; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=74.78 E-value=16 Score=28.62 Aligned_cols=63 Identities=14% Similarity=0.127 Sum_probs=44.1
Q ss_pred cceEEEEe------CCHHHHHHHHHHhhcCCCEEEEE----CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEe
Q 026239 15 QFHVLAVD------DSIIDRKLIERLLKTSSYQVTTV----DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITD 84 (241)
Q Consensus 15 ~~~ILiVd------d~~~~~~~l~~~L~~~g~~v~~~----~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD 84 (241)
..+|++|+ |.......+.+.|+..|+.+... .+.++..+.+.. .|.|++
T Consensus 27 ~~~i~~Ip~As~~~~~~~~~~s~~~a~~~lG~~v~~~~i~~~~~~~~~~~l~~--------------------ad~I~l- 85 (206)
T 3l4e_A 27 GKTVTFIPTASTVEEVTFYVEAGKKALESLGLLVEELDIATESLGEITTKLRK--------------------NDFIYV- 85 (206)
T ss_dssp TCEEEEECGGGGGCSCCHHHHHHHHHHHHTTCEEEECCTTTSCHHHHHHHHHH--------------------SSEEEE-
T ss_pred CCEEEEECCCCCCCCHHHHHHHHHHHHHHcCCeEEEEEecCCChHHHHHHHHh--------------------CCEEEE-
Confidence 47899997 33346677888999999998887 377666666642 347776
Q ss_pred CCCCCCCHHHHHHHHHh
Q 026239 85 YCMPGMTGYDLLKKIKE 101 (241)
Q Consensus 85 ~~mp~~~g~~ll~~ir~ 101 (241)
||.+-..+++.+++
T Consensus 86 ---~GG~~~~l~~~L~~ 99 (206)
T 3l4e_A 86 ---TGGNTFFLLQELKR 99 (206)
T ss_dssp ---CCSCHHHHHHHHHH
T ss_pred ---CCCCHHHHHHHHHH
Confidence 67777666666554
No 198
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=74.75 E-value=12 Score=29.83 Aligned_cols=53 Identities=9% Similarity=0.276 Sum_probs=39.1
Q ss_pred EEEEeCCCCCC-C--HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 80 LVITDYCMPGM-T--GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 80 lIilD~~mp~~-~--g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
+++++..-.++ . .+++++++++.. ++|||+-.+-...+.+.++++.||++++.
T Consensus 168 i~~~~~~~~g~~~g~~~~~~~~l~~~~---~ipvia~GGI~~~~d~~~~~~~Gadgv~v 223 (253)
T 1thf_D 168 ILLTSIDRDGTKSGYDTEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLAGADAALA 223 (253)
T ss_dssp EEEEETTTTTSCSCCCHHHHHHHGGGC---CSCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred EEEEeccCCCCCCCCCHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHHcCChHHHH
Confidence 55566543221 2 388999998753 78999988888889999999999987643
No 199
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=74.69 E-value=27 Score=26.92 Aligned_cols=43 Identities=9% Similarity=-0.005 Sum_probs=32.3
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhccc
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLH 58 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~ 58 (241)
.+|+++-..+.+...+..++...+.++. ...+.++++......
T Consensus 5 ~~I~~iapy~~l~~~~~~i~~e~~~~i~i~~~~l~~~v~~a~~~ 48 (196)
T 2q5c_A 5 LKIALISQNENLLNLFPKLALEKNFIPITKTASLTRASKIAFGL 48 (196)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHTCEEEEEECCHHHHHHHHHHH
T ss_pred CcEEEEEccHHHHHHHHHHHhhhCCceEEEECCHHHHHHHHHHh
Confidence 5788888888888888888876666665 456788888876543
No 200
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=74.46 E-value=10 Score=32.55 Aligned_cols=33 Identities=15% Similarity=0.213 Sum_probs=26.6
Q ss_pred hHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 119 PSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 119 ~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
.+.+..|+++|..=++-||++.++..+++....
T Consensus 84 ~~~a~~al~aGkhVl~EKPl~~~ea~~l~~~A~ 116 (372)
T 4gmf_A 84 TQLARHFLARGVHVIQEHPLHPDDISSLQTLAQ 116 (372)
T ss_dssp HHHHHHHHHTTCEEEEESCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCcEEEecCCCHHHHHHHHHHHH
Confidence 466788999999999999999888777665544
No 201
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=74.45 E-value=8.2 Score=32.39 Aligned_cols=107 Identities=15% Similarity=0.171 Sum_probs=60.1
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhc-CCCEEE-EECC-HHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKT-SSYQVT-TVDS-GSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP 88 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~-~g~~v~-~~~~-~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp 88 (241)
..+++||-||.--..-+..+...+.. .+++++ +++. .+.|-++..... +.-++.|+
T Consensus 20 ~~~mirigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g------------------~~~~y~d~--- 78 (350)
T 4had_A 20 FQSMLRFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFS------------------VPHAFGSY--- 78 (350)
T ss_dssp --CCEEEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHT------------------CSEEESSH---
T ss_pred ccCccEEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcC------------------CCeeeCCH---
Confidence 45679999999887666554445544 467777 4443 333333332211 11233332
Q ss_pred CCCHHHHHHHHHhcCCCCCCcEEEEccCC--ChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 89 GMTGYDLLKKIKESSSLRDIPVVIMSSEN--VPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 89 ~~~g~~ll~~ir~~~~~~~ipvIils~~~--~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
-+++ .. . ++-+|+++... -.+.+..|+++|..=|+-||+ +.++..+++...
T Consensus 79 ----~ell---~~-~---~iDaV~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a 133 (350)
T 4had_A 79 ----EEML---AS-D---VIDAVYIPLPTSQHIEWSIKAADAGKHVVCEKPLALKAGDIDAVIAAR 133 (350)
T ss_dssp ----HHHH---HC-S---SCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSSGGGGHHHHHHH
T ss_pred ----HHHh---cC-C---CCCEEEEeCCCchhHHHHHHHHhcCCEEEEeCCcccchhhHHHHHHHH
Confidence 2333 22 1 44455554433 356788999999999999997 455665555443
No 202
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=74.34 E-value=29 Score=27.02 Aligned_cols=65 Identities=12% Similarity=0.104 Sum_probs=46.5
Q ss_pred EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC-C-CHHHHHHHHHhcCCCCCCcEEEEccCCChHH
Q 026239 44 TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG-M-TGYDLLKKIKESSSLRDIPVVIMSSENVPSR 121 (241)
Q Consensus 44 ~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~-~-~g~~ll~~ir~~~~~~~ipvIils~~~~~~~ 121 (241)
-+.+..++...... ..|.|-+ .|. . -|.+.++.++...+ ++|++.+.+- +.+.
T Consensus 110 G~~t~~e~~~A~~~-------------------Gad~v~~---fpa~~~gG~~~lk~l~~~~~--~ipvvaiGGI-~~~n 164 (207)
T 2yw3_A 110 GVLTPTEVERALAL-------------------GLSALKF---FPAEPFQGVRVLRAYAEVFP--EVRFLPTGGI-KEEH 164 (207)
T ss_dssp EECSHHHHHHHHHT-------------------TCCEEEE---TTTTTTTHHHHHHHHHHHCT--TCEEEEBSSC-CGGG
T ss_pred cCCCHHHHHHHHHC-------------------CCCEEEE---ecCccccCHHHHHHHHhhCC--CCcEEEeCCC-CHHH
Confidence 46788888777642 2446655 343 2 38999999998643 7999876654 4678
Q ss_pred HHHHHHhccccc
Q 026239 122 ISRCLEEGAEEF 133 (241)
Q Consensus 122 ~~~~l~~Ga~~~ 133 (241)
+..++.+|++.+
T Consensus 165 ~~~~l~aGa~~v 176 (207)
T 2yw3_A 165 LPHYAALPNLLA 176 (207)
T ss_dssp HHHHHTCSSBSC
T ss_pred HHHHHhCCCcEE
Confidence 889999999876
No 203
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=73.98 E-value=6.8 Score=32.50 Aligned_cols=58 Identities=9% Similarity=0.118 Sum_probs=46.0
Q ss_pred ccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 78 VNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 78 ~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
.++|.+|+.- .....++++++++... .++||++-.+-.+.+.+.+++++||+.++.-.
T Consensus 200 ~~lV~LD~~~-~~v~~e~V~~I~~~~~-~~iPV~vGGGIrs~Eda~~ll~aGAD~VVVGS 257 (286)
T 3vk5_A 200 FHMVYLYSRN-EHVPPEVVRHFRKGLG-PDQVLFVSGNVRSGRQVTEYLDSGADYVGFAG 257 (286)
T ss_dssp CSEEEEECSS-SCCCHHHHHHHHHHSC-TTCEEEEESSCCSHHHHHHHHHTTCSEEEESG
T ss_pred CCEEEEcCCC-CcCCHHHHHHHHHhcC-CCCCEEEEeCCCCHHHHHHHHHcCCCEEEECc
Confidence 4799999765 4445799999998531 16899988888899999999999999887654
No 204
>2d00_A V-type ATP synthase subunit F; V-ATPase, CHEY, FRET, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.149.1.1 PDB: 3a5c_H* 3a5d_H 3j0j_H*
Probab=73.93 E-value=20 Score=25.03 Aligned_cols=79 Identities=14% Similarity=0.166 Sum_probs=50.5
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
.++|.+|.| ...... +.-.|.++..+.+.+++.+.+.... .+.++.+|++.-.+-. .--+
T Consensus 3 ~mkiaVIgD-~dtv~G----FrLaGi~~~~v~~~ee~~~~~~~l~--------------~~~digIIlIte~~a~-~i~~ 62 (109)
T 2d00_A 3 PVRMAVIAD-PETAQG----FRLAGLEGYGASSAEEAQSLLETLV--------------ERGGYALVAVDEALLP-DPER 62 (109)
T ss_dssp CCCEEEEEC-HHHHHH----HHHTTSEEEECSSHHHHHHHHHHHH--------------HHCCCSEEEEETTTCS-CHHH
T ss_pred ccEEEEEeC-HHHHHH----HHHcCCeEEEeCCHHHHHHHHHHHh--------------hCCCeEEEEEeHHHHH-hhHH
Confidence 478999999 443332 3346888888888888777665422 2235779999887765 3345
Q ss_pred HHHHHHhcCCCCCCcEEEEccC
Q 026239 95 LLKKIKESSSLRDIPVVIMSSE 116 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~ 116 (241)
.+..++... ..|+|+.-+.
T Consensus 63 ~i~~~~~~~---~~P~Il~IPs 81 (109)
T 2d00_A 63 AVERLMRGR---DLPVLLPIAG 81 (109)
T ss_dssp HHHHHTTCC---CCCEEEEESC
T ss_pred HHHHHHhCC---CCeEEEEECC
Confidence 566665322 5788776543
No 205
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=73.87 E-value=8.5 Score=31.91 Aligned_cols=70 Identities=13% Similarity=0.015 Sum_probs=46.4
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-CCCHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-GMTGY 93 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-~~~g~ 93 (241)
.-++.+||-++.....|+..++..+-..+...|+..++..+... ...+|+||+|=--. ..+.-
T Consensus 113 ~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~----------------~~~fdLVfiDPPYe~k~~~~ 176 (283)
T 2oo3_A 113 QDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPP----------------PEKRGLIFIDPSYERKEEYK 176 (283)
T ss_dssp TSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSC----------------TTSCEEEEECCCCCSTTHHH
T ss_pred CCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCC----------------CCCccEEEECCCCCCCcHHH
Confidence 46899999999999999988876432233567888888766321 12478999995333 22344
Q ss_pred HHHHHHH
Q 026239 94 DLLKKIK 100 (241)
Q Consensus 94 ~ll~~ir 100 (241)
.+++.|.
T Consensus 177 ~vl~~L~ 183 (283)
T 2oo3_A 177 EIPYAIK 183 (283)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4555554
No 206
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=73.85 E-value=5.7 Score=30.70 Aligned_cols=42 Identities=14% Similarity=0.212 Sum_probs=32.0
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.|.++++.++...+ ++||++..+-+ .+.+..++.+||+.+..
T Consensus 136 ~g~~~~~~l~~~~~--~~pvia~GGI~-~~~~~~~~~~Ga~~v~v 177 (205)
T 1wa3_A 136 VGPQFVKAMKGPFP--NVKFVPTGGVN-LDNVCEWFKAGVLAVGV 177 (205)
T ss_dssp HHHHHHHHHHTTCT--TCEEEEBSSCC-TTTHHHHHHHTCSCEEE
T ss_pred cCHHHHHHHHHhCC--CCcEEEcCCCC-HHHHHHHHHCCCCEEEE
Confidence 37888999887543 78988777654 66788999999988643
No 207
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=73.81 E-value=9.4 Score=30.30 Aligned_cols=63 Identities=24% Similarity=0.304 Sum_probs=43.0
Q ss_pred EEEEeCCCCCC---CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHh---cccccc------cCCCCHHHHHH
Q 026239 80 LVITDYCMPGM---TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEE---GAEEFF------LKPVRLSDLNK 145 (241)
Q Consensus 80 lIilD~~mp~~---~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~---Ga~~~l------~KP~~~~~L~~ 145 (241)
+++++..-.++ -.+++++++++.. ++|||+-.+-...+.+.++++. ||++++ ..|++..++.+
T Consensus 163 i~~~~~~~~~~~~g~~~~~~~~i~~~~---~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG~al~~~~~~~~~~~~ 237 (244)
T 1vzw_A 163 YVVTDIAKDGTLQGPNLELLKNVCAAT---DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVGKALYAKAFTLEEALE 237 (244)
T ss_dssp EEEEEC-------CCCHHHHHHHHHTC---SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEECHHHHTTSSCHHHHHH
T ss_pred EEEeccCcccccCCCCHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHhhccCCCceeeeeHHHHcCCCCHHHHHH
Confidence 55566542221 2478999998753 6899998888888999999998 998764 35666555533
No 208
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=73.75 E-value=1.8 Score=33.71 Aligned_cols=56 Identities=13% Similarity=0.114 Sum_probs=34.5
Q ss_pred CHHHHHHHHHhcCCCCCCcEEE--EccCCChHHHHHHHHhcccccccCCCCH-HHHHHhhH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVI--MSSENVPSRISRCLEEGAEEFFLKPVRL-SDLNKLKP 148 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIi--ls~~~~~~~~~~~l~~Ga~~~l~KP~~~-~~L~~~~~ 148 (241)
.|.++++.|++..+ +.|+++ ++.......+..+.++||+.+..-+... ..+..++.
T Consensus 39 ~g~~~i~~l~~~~~--~~~i~~~l~~~di~~~~~~~a~~~Gad~v~vh~~~~~~~~~~~~~ 97 (207)
T 3ajx_A 39 EGLSVITAVKKAHP--DKIVFADMKTMDAGELEADIAFKAGADLVTVLGSADDSTIAGAVK 97 (207)
T ss_dssp HCTHHHHHHHHHST--TSEEEEEEEECSCHHHHHHHHHHTTCSEEEEETTSCHHHHHHHHH
T ss_pred hCHHHHHHHHHhCC--CCeEEEEEEecCccHHHHHHHHhCCCCEEEEeccCChHHHHHHHH
Confidence 46778888887642 677775 4332123347788899998876666543 44443333
No 209
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=73.70 E-value=11 Score=30.08 Aligned_cols=41 Identities=22% Similarity=0.297 Sum_probs=33.2
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.+++++.+++.. ++||++..+-.+.+.+..+++.||+.++.
T Consensus 62 ~~~~i~~i~~~~---~ipvi~~ggI~~~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 62 MLELVEKVAEQI---DIPFTVGGGIHDFETASELILRGADKVSI 102 (253)
T ss_dssp HHHHHHHHHTTC---CSCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred cHHHHHHHHHhC---CCCEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 356778887642 79999988888889999999999988765
No 210
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=73.67 E-value=32 Score=27.97 Aligned_cols=88 Identities=7% Similarity=0.018 Sum_probs=56.3
Q ss_pred HHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEe-CCCCCC-CHHHHHHHHHhcCCC
Q 026239 29 KLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITD-YCMPGM-TGYDLLKKIKESSSL 105 (241)
Q Consensus 29 ~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD-~~mp~~-~g~~ll~~ir~~~~~ 105 (241)
..+..+-...|.++. .+.+.+|+-..+... .++|=++ -++... ..++...+|...-+
T Consensus 143 ~~l~~~A~~lGl~~LvEVh~~~El~rAl~~~-------------------a~iIGINNRnL~tf~vdl~~t~~L~~~ip- 202 (258)
T 4a29_A 143 ESLLEYARSYGMEPLILINDENDLDIALRIG-------------------ARFIGIMSRDFETGEINKENQRKLISMIP- 202 (258)
T ss_dssp HHHHHHHHHTTCCCEEEESSHHHHHHHHHTT-------------------CSEEEECSBCTTTCCBCHHHHHHHHTTSC-
T ss_pred HHHHHHHHHHhHHHHHhcchHHHHHHHhcCC-------------------CcEEEEeCCCccccccCHHHHHHHHhhCC-
Confidence 334445566787654 788998877766432 2355332 222221 12455666665443
Q ss_pred CCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 106 RDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 106 ~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
.++.+|.-|+-.+++.+.++...|+++||.-
T Consensus 203 ~~~~~VsESGI~t~~dv~~l~~~G~~a~LVG 233 (258)
T 4a29_A 203 SNVVKVAKLGISERNEIEELRKLGVNAFLIS 233 (258)
T ss_dssp TTSEEEEEESSCCHHHHHHHHHTTCCEEEEC
T ss_pred CCCEEEEcCCCCCHHHHHHHHHCCCCEEEEC
Confidence 3667777788889999999999999999874
No 211
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=73.65 E-value=16 Score=30.92 Aligned_cols=107 Identities=19% Similarity=0.175 Sum_probs=60.1
Q ss_pred CcceEEEEeCCHHHHH-HHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 14 SQFHVLAVDDSIIDRK-LIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~-~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
.+++|.||.--..-.. .+..+....+++++ +++...+..+.+...-+. + -+.. +
T Consensus 4 ~~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~~~----------------~-~~~~-------~ 59 (359)
T 3m2t_A 4 SLIKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERARRVHRFISD----------------I-PVLD-------N 59 (359)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHHGGGGGTSCS----------------C-CEES-------S
T ss_pred CcceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHHhcCC----------------C-cccC-------C
Confidence 4689999998876665 44444444477777 555444444433321100 0 1111 2
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHLM 151 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l~ 151 (241)
--+++. . . ++-+|+++.. ...+.+..|+++|..=|+-||+ +.++..+++....
T Consensus 60 ~~~ll~---~-~---~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a~ 116 (359)
T 3m2t_A 60 VPAMLN---Q-V---PLDAVVMAGPPQLHFEMGLLAMSKGVNVFVEKPPCATLEELETLIDAAR 116 (359)
T ss_dssp HHHHHH---H-S---CCSEEEECSCHHHHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHHH
T ss_pred HHHHhc---C-C---CCCEEEEcCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHHH
Confidence 223333 2 1 3445554443 2355677899999999999996 5566666655443
No 212
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=73.61 E-value=20 Score=28.09 Aligned_cols=53 Identities=21% Similarity=0.281 Sum_probs=38.2
Q ss_pred EEEEeCCCCCC---CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 80 LVITDYCMPGM---TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 80 lIilD~~mp~~---~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
+.+.|...... ..+++++.+++.. ++||++...-.+.+.+..++++||+.+..
T Consensus 50 i~v~~~~~~~~~~~~~~~~i~~i~~~~---~ipvi~~g~i~~~~~~~~~~~~Gad~V~i 105 (253)
T 1h5y_A 50 IAILDITAAPEGRATFIDSVKRVAEAV---SIPVLVGGGVRSLEDATTLFRAGADKVSV 105 (253)
T ss_dssp EEEEECCCCTTTHHHHHHHHHHHHHHC---SSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred EEEEeCCccccCCcccHHHHHHHHHhc---CCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 45555543221 2467888888753 68999888888888889999999987753
No 213
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=73.44 E-value=14 Score=29.08 Aligned_cols=40 Identities=13% Similarity=0.248 Sum_probs=33.4
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
++++++.++.. ++||++..+-.+.+.+..++++||+.++.
T Consensus 175 ~~~~i~~~~~~----~ipvia~GGI~s~~~~~~~~~~Gad~v~v 214 (234)
T 1yxy_A 175 DVALIEALCKA----GIAVIAEGKIHSPEEAKKINDLGVAGIVV 214 (234)
T ss_dssp CHHHHHHHHHT----TCCEEEESCCCSHHHHHHHHTTCCSEEEE
T ss_pred CHHHHHHHHhC----CCCEEEECCCCCHHHHHHHHHCCCCEEEE
Confidence 46888888863 68999888887799999999999998754
No 214
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=72.82 E-value=20 Score=24.45 Aligned_cols=41 Identities=12% Similarity=0.184 Sum_probs=32.1
Q ss_pred eEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcc
Q 026239 17 HVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGL 57 (241)
Q Consensus 17 ~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~ 57 (241)
-|++...|......+..+++..||.|.++.+..+.-+.+..
T Consensus 4 vivvfstdeetlrkfkdiikkngfkvrtvrspqelkdsiee 44 (134)
T 2l69_A 4 VIVVFSTDEETLRKFKDIIKKNGFKVRTVRSPQELKDSIEE 44 (134)
T ss_dssp EEEECCCCHHHHHHHHHHHHHTTCEEEEECSHHHHHHHHHH
T ss_pred EEEEEeCCHHHHHHHHHHHHhcCceEEEecCHHHHHHHHHH
Confidence 35556677777777899999999999999998887666543
No 215
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=72.82 E-value=33 Score=28.20 Aligned_cols=64 Identities=16% Similarity=0.267 Sum_probs=42.8
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC-CCCHHHHHHhhHHHHH
Q 026239 79 NLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK-PVRLSDLNKLKPHLMK 152 (241)
Q Consensus 79 dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K-P~~~~~L~~~~~~l~~ 152 (241)
|++|+-... +.-|..+++.+.. .+|||+.......+ .+..|..+++.. |.+.++|.+.+..++.
T Consensus 272 d~~v~ps~~-e~~~~~~~Ea~a~-----G~Pvi~~~~~~~~e----~i~~~~~g~~~~~~~~~~~l~~~i~~l~~ 336 (374)
T 2iw1_A 272 DLLLHPAYQ-EAAGIVLLEAITA-----GLPVLTTAVCGYAH----YIADANCGTVIAEPFSQEQLNEVLRKALT 336 (374)
T ss_dssp SEEEECCSC-CSSCHHHHHHHHH-----TCCEEEETTSTTTH----HHHHHTCEEEECSSCCHHHHHHHHHHHHH
T ss_pred CEEEecccc-CCcccHHHHHHHC-----CCCEEEecCCCchh----hhccCCceEEeCCCCCHHHHHHHHHHHHc
Confidence 577764432 3446677777764 67888765433333 445667788887 8899999887777764
No 216
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=72.77 E-value=28 Score=29.77 Aligned_cols=87 Identities=17% Similarity=0.153 Sum_probs=57.3
Q ss_pred HHHHHHhhcCCCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC----C-CCCHHHHHHHHHh
Q 026239 29 KLIERLLKTSSYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM----P-GMTGYDLLKKIKE 101 (241)
Q Consensus 29 ~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m----p-~~~g~~ll~~ir~ 101 (241)
+.+..+-+..+..|. .+.+.+++..+... .+|.|.+.-+- . +...++++..++.
T Consensus 215 ~~i~~l~~~~~~pv~vK~~~~~e~a~~a~~~-------------------Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~ 275 (370)
T 1gox_A 215 KDVAWLQTITSLPILVKGVITAEDARLAVQH-------------------GAAGIIVSNHGARQLDYVPATIMALEEVVK 275 (370)
T ss_dssp HHHHHHHHHCCSCEEEECCCSHHHHHHHHHT-------------------TCSEEEECCGGGTSSTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEecCCHHHHHHHHHc-------------------CCCEEEECCCCCccCCCcccHHHHHHHHHH
Confidence 445555555554444 45677777665532 34577663311 1 1245778888876
Q ss_pred cCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 102 SSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 102 ~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
... .++|||...+-.+...+.+++.+||+.+..
T Consensus 276 ~~~-~~ipvia~GGI~~~~D~~k~l~~GAdaV~i 308 (370)
T 1gox_A 276 AAQ-GRIPVFLDGGVRRGTDVFKALALGAAGVFI 308 (370)
T ss_dssp HTT-TSSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HhC-CCCEEEEECCCCCHHHHHHHHHcCCCEEee
Confidence 432 369999999988999999999999998754
No 217
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=72.71 E-value=4.9 Score=31.38 Aligned_cols=45 Identities=18% Similarity=0.382 Sum_probs=36.6
Q ss_pred CCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 87 MPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 87 mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
||+.-- ++++++++.. ++|||+=..-.+.+.+..|+++||+..-+
T Consensus 134 LPGi~p-~iI~~i~~~~---~~PiIaGGlI~~~edv~~al~aGA~aVsT 178 (192)
T 3kts_A 134 LPGIIP-EQVQKMTQKL---HIPVIAGGLIETSEQVNQVIASGAIAVTT 178 (192)
T ss_dssp ECTTCH-HHHHHHHHHH---CCCEEEESSCCSHHHHHHHHTTTEEEEEE
T ss_pred CCchhH-HHHHHHHHhc---CCCEEEECCcCCHHHHHHHHHcCCeEEEe
Confidence 577553 7899998864 78999877788899999999999987643
No 218
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=72.29 E-value=30 Score=28.58 Aligned_cols=92 Identities=17% Similarity=0.209 Sum_probs=54.6
Q ss_pred eEEEEeCCHHHH----HHHHHHhhcCCC--EE-EEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 17 HVLAVDDSIIDR----KLIERLLKTSSY--QV-TTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 17 ~ILiVdd~~~~~----~~l~~~L~~~g~--~v-~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
-+||.||+.... ..++..-+..+. .+ ..+.+.+++.+.+.. ..|.|.+|-.-|
T Consensus 168 ~~LIkdnHi~~aggi~~av~~ar~~~~~~~~IgVev~t~eea~eA~~a-------------------GaD~I~ld~~~~- 227 (286)
T 1x1o_A 168 GILLKENHVRAAGGVGEAVRRAKARAPHYLKVEVEVRSLEELEEALEA-------------------GADLILLDNFPL- 227 (286)
T ss_dssp CEEECHHHHHHHTSHHHHHHHHHHHSCTTSCEEEEESSHHHHHHHHHH-------------------TCSEEEEESCCH-
T ss_pred ceEEECCHHHHhCCHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHc-------------------CCCEEEECCCCH-
Confidence 367888776543 233333333333 22 367889998887742 246999996432
Q ss_pred CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 90 MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 90 ~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
+.++.+..... .++|+++ ++.-+.+.+....+.|++.+-
T Consensus 228 ----~~~k~av~~v~-~~ipi~A-sGGIt~eni~~~a~tGvD~Is 266 (286)
T 1x1o_A 228 ----EALREAVRRVG-GRVPLEA-SGNMTLERAKAAAEAGVDYVS 266 (286)
T ss_dssp ----HHHHHHHHHHT-TSSCEEE-ESSCCHHHHHHHHHHTCSEEE
T ss_pred ----HHHHHHHHHhC-CCCeEEE-EcCCCHHHHHHHHHcCCCEEE
Confidence 22333322111 1577765 566678899999999997653
No 219
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=71.92 E-value=17 Score=30.14 Aligned_cols=81 Identities=16% Similarity=0.262 Sum_probs=49.5
Q ss_pred hcCCC-EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC--CCCH----------HHHH----HH
Q 026239 36 KTSSY-QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP--GMTG----------YDLL----KK 98 (241)
Q Consensus 36 ~~~g~-~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp--~~~g----------~~ll----~~ 98 (241)
+..|+ .+.++.+.++|..+... .+|+|++..-+- +.-| .+.+ +.
T Consensus 160 ~~~gL~Ti~~v~~~eeA~amA~a-------------------gpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a 220 (286)
T 2p10_A 160 HKLDLLTTPYVFSPEDAVAMAKA-------------------GADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEA 220 (286)
T ss_dssp HHTTCEECCEECSHHHHHHHHHH-------------------TCSEEEEECSCC---------CCCHHHHHHHHHHHHHH
T ss_pred HHCCCeEEEecCCHHHHHHHHHc-------------------CCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHH
Confidence 44565 45588999998877632 356888865432 2222 2233 33
Q ss_pred HHhcCCCCCCcEEEEc-cCCChHHHHHHHHh--cccccccCC
Q 026239 99 IKESSSLRDIPVVIMS-SENVPSRISRCLEE--GAEEFFLKP 137 (241)
Q Consensus 99 ir~~~~~~~ipvIils-~~~~~~~~~~~l~~--Ga~~~l~KP 137 (241)
+++..+ ++.|+.-. +-..++++..+++. |+++|+.-.
T Consensus 221 ~~~vnp--dvivLc~gGpIstpeDv~~~l~~t~G~~G~~gAS 260 (286)
T 2p10_A 221 ARTIRD--DIIILSHGGPIANPEDARFILDSCQGCHGFYGAS 260 (286)
T ss_dssp HHHHCS--CCEEEEESTTCCSHHHHHHHHHHCTTCCEEEESH
T ss_pred HHHhCC--CcEEEecCCCCCCHHHHHHHHhcCCCccEEEeeh
Confidence 344433 65444444 34678899999999 999998754
No 220
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=71.68 E-value=11 Score=29.52 Aligned_cols=67 Identities=12% Similarity=0.108 Sum_probs=44.3
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCE---EEE-ECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQ---VTT-VDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~---v~~-~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
..+|..||-++......+..++..|+. +.. ..+..+.+..+ ....||+||+|...+.
T Consensus 81 ~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~------------------~~~~fD~V~~d~~~~~- 141 (221)
T 3dr5_A 81 NTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRL------------------ANDSYQLVFGQVSPMD- 141 (221)
T ss_dssp TSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGS------------------CTTCEEEEEECCCTTT-
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHh------------------cCCCcCeEEEcCcHHH-
Confidence 478999999999998888888887764 553 44555443322 1245899999975433
Q ss_pred CHHHHHHHHHh
Q 026239 91 TGYDLLKKIKE 101 (241)
Q Consensus 91 ~g~~ll~~ir~ 101 (241)
-.++++.+..
T Consensus 142 -~~~~l~~~~~ 151 (221)
T 3dr5_A 142 -LKALVDAAWP 151 (221)
T ss_dssp -HHHHHHHHHH
T ss_pred -HHHHHHHHHH
Confidence 3345555543
No 221
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=71.61 E-value=15 Score=30.83 Aligned_cols=70 Identities=14% Similarity=0.156 Sum_probs=41.0
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcC-CCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC-
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTS-SYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT- 91 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~-g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~- 91 (241)
..+|.+||=++.+.+..++.+... +-.+. ...|+.+.+..+ ....||+||+|...+...
T Consensus 113 ~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~------------------~~~~fDvIi~D~~~~~~~~ 174 (317)
T 3gjy_A 113 QSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESF------------------TPASRDVIIRDVFAGAITP 174 (317)
T ss_dssp TCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTC------------------CTTCEEEEEECCSTTSCCC
T ss_pred CcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhc------------------cCCCCCEEEECCCCccccc
Confidence 457777887777777777766532 12233 455555544321 124589999997665321
Q ss_pred ----HHHHHHHHHhc
Q 026239 92 ----GYDLLKKIKES 102 (241)
Q Consensus 92 ----g~~ll~~ir~~ 102 (241)
..++++.++..
T Consensus 175 ~~L~t~efl~~~~r~ 189 (317)
T 3gjy_A 175 QNFTTVEFFEHCHRG 189 (317)
T ss_dssp GGGSBHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHh
Confidence 24666666553
No 222
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=71.40 E-value=39 Score=28.38 Aligned_cols=45 Identities=11% Similarity=0.123 Sum_probs=37.0
Q ss_pred CCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 89 GMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 89 ~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
+....+.++.++... .++|||...+-.+.+.+.+++.+||+.+..
T Consensus 235 g~~~~~~l~~v~~~~--~~ipvia~GGI~~~~d~~k~l~~GAd~V~i 279 (349)
T 1p0k_A 235 GISTAASLAEIRSEF--PASTMIASGGLQDALDVAKAIALGASCTGM 279 (349)
T ss_dssp SCCHHHHHHHHHHHC--TTSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CccHHHHHHHHHHhc--CCCeEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 456778888887753 379999999988999999999999998754
No 223
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=71.18 E-value=10 Score=29.85 Aligned_cols=41 Identities=17% Similarity=0.373 Sum_probs=33.3
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.+++++.+++.. ++||++-.+-...+.+.+++++||++++.
T Consensus 186 ~~~~i~~l~~~~---~~pvia~GGi~~~~~~~~~~~~Ga~~v~v 226 (253)
T 1h5y_A 186 DVELIRRVADSV---RIPVIASGGAGRVEHFYEAAAAGADAVLA 226 (253)
T ss_dssp CHHHHHHHHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHhc---CCCEEEeCCCCCHHHHHHHHHcCCcHHHH
Confidence 468889888753 78999888877778888999999998743
No 224
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=71.08 E-value=21 Score=30.51 Aligned_cols=88 Identities=14% Similarity=0.117 Sum_probs=57.8
Q ss_pred HHHHHHHhhcCCCE--EEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC-----CCCCHHHHHHHHH
Q 026239 28 RKLIERLLKTSSYQ--VTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM-----PGMTGYDLLKKIK 100 (241)
Q Consensus 28 ~~~l~~~L~~~g~~--v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m-----p~~~g~~ll~~ir 100 (241)
.+.++.+-+..+.- +..+.+.++|..... ..+|.|++.-+- .+...++++..++
T Consensus 206 w~~i~~lr~~~~~PvivK~v~~~e~A~~a~~-------------------~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~ 266 (352)
T 3sgz_A 206 WNDLSLLQSITRLPIILKGILTKEDAELAMK-------------------HNVQGIVVSNHGGRQLDEVSASIDALREVV 266 (352)
T ss_dssp HHHHHHHHHHCCSCEEEEEECSHHHHHHHHH-------------------TTCSEEEECCGGGTSSCSSCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEecCcHHHHHHHHH-------------------cCCCEEEEeCCCCCccCCCccHHHHHHHHH
Confidence 34455554444433 335678888877653 235577663221 1234578888886
Q ss_pred hcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 101 ESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 101 ~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
..-. .++|||+-.+-.+...+.+++.+||+.+..
T Consensus 267 ~av~-~~ipVia~GGI~~g~Dv~kaLalGA~aV~i 300 (352)
T 3sgz_A 267 AAVK-GKIEVYMDGGVRTGTDVLKALALGARCIFL 300 (352)
T ss_dssp HHHT-TSSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHhC-CCCeEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 5421 269999999988999999999999998754
No 225
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=70.84 E-value=14 Score=30.84 Aligned_cols=41 Identities=22% Similarity=0.443 Sum_probs=30.6
Q ss_pred HHHHHHHHHhcCCCCCCcEEE--EccCCChHHHHHHHHhccccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVVI--MSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIi--ls~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.++++++++... .+|||+ -++-.+++.+..++.+||++++.
T Consensus 195 ~~~ll~~i~~~~---~iPVivvA~GGI~t~~dv~~~~~~GAdgVlV 237 (297)
T 4adt_A 195 PIDLILLTRKLK---RLPVVNFAAGGIATPADAAMCMQLGMDGVFV 237 (297)
T ss_dssp CHHHHHHHHHHT---SCSSEEEEESCCCSHHHHHHHHHTTCSCEEE
T ss_pred CHHHHHHHHHhc---CCCeEEEecCCCCCHHHHHHHHHcCCCEEEE
Confidence 367788887753 578874 34445789999999999999864
No 226
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=70.68 E-value=37 Score=28.35 Aligned_cols=47 Identities=15% Similarity=0.287 Sum_probs=37.0
Q ss_pred CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc-ccCCC
Q 026239 90 MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF-FLKPV 138 (241)
Q Consensus 90 ~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~-l~KP~ 138 (241)
...++++..++.... ++|||...+-.+...+.+++.+||+.+ +-.|+
T Consensus 241 ~~~~~~l~~v~~~~~--~ipvia~GGI~~~~d~~kal~~GAd~V~igr~~ 288 (332)
T 1vcf_A 241 IPTARAILEVREVLP--HLPLVASGGVYTGTDGAKALALGADLLAVARPL 288 (332)
T ss_dssp CBHHHHHHHHHHHCS--SSCEEEESSCCSHHHHHHHHHHTCSEEEECGGG
T ss_pred ccHHHHHHHHHHhcC--CCeEEEECCCCCHHHHHHHHHhCCChHhhhHHH
Confidence 346777888877543 699999999999999999999999876 34554
No 227
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=70.48 E-value=17 Score=30.78 Aligned_cols=104 Identities=15% Similarity=0.145 Sum_probs=58.1
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
.+++|.||.--..-...+..+....+++++ +++...+..+.... + ++-.. .+-
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~~--~------------------g~~~~------~~~ 57 (359)
T 3e18_A 4 KKYQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKREAAAQ--K------------------GLKIY------ESY 57 (359)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHHT--T------------------TCCBC------SCH
T ss_pred CcCcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHHh--c------------------CCcee------CCH
Confidence 468999999877666555544444478876 44544444443321 1 11000 122
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
-+++. . . ++-+|+++.. ...+.+..|+++|..=|+-||+ +.++..+++...
T Consensus 58 ~~ll~---~-~---~~D~V~i~tp~~~h~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a 112 (359)
T 3e18_A 58 EAVLA---D-E---KVDAVLIATPNDSHKELAISALEAGKHVVCEKPVTMTSEDLLAIMDVA 112 (359)
T ss_dssp HHHHH---C-T---TCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHH
T ss_pred HHHhc---C-C---CCCEEEEcCCcHHHHHHHHHHHHCCCCEEeeCCCcCCHHHHHHHHHHH
Confidence 23332 1 1 3444444433 3356677899999998999996 456665555443
No 228
>1qv9_A F420-dependent methylenetetrahydromethanopterin dehydrogenase; monomer: alpha/beta domain, helix bundle, trimer of dimers, oxidoreductase; HET: MSE; 1.54A {Methanopyrus kandleri} SCOP: c.127.1.1 PDB: 1u6i_A 1u6j_A 1u6k_A* 3iqe_A* 3iqf_A* 3iqz_A*
Probab=70.30 E-value=4.3 Score=32.77 Aligned_cols=58 Identities=14% Similarity=0.216 Sum_probs=41.5
Q ss_pred ccccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 76 VGVNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 76 ~~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
+.+|++|+=---|...|-.-.+.+-.. .++|.|++|...... ...+++..-.+||+-+
T Consensus 63 ~~pDfvI~isPN~a~PGP~~ARE~l~~---~~iP~IvI~D~p~~K-~kd~l~~~g~GYIivk 120 (283)
T 1qv9_A 63 FEPDFIVYGGPNPAAPGPSKAREMLAD---SEYPAVIIGDAPGLK-VKDEMEEQGLGYILVK 120 (283)
T ss_dssp HCCSEEEEECSCTTSHHHHHHHHHHHT---SSSCEEEEEEGGGGG-GHHHHHHTTCEEEEET
T ss_pred cCCCEEEEECCCCCCCCchHHHHHHHh---CCCCEEEEcCCcchh-hHHHHHhcCCcEEEEe
Confidence 346688886666677888888877653 389999999876555 4577777777776543
No 229
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=70.29 E-value=31 Score=25.72 Aligned_cols=82 Identities=18% Similarity=0.182 Sum_probs=52.0
Q ss_pred eEEEEe--CCHHHHHHHHHHhhcCCCEEEEEC-CHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC--
Q 026239 17 HVLAVD--DSIIDRKLIERLLKTSSYQVTTVD-SGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT-- 91 (241)
Q Consensus 17 ~ILiVd--d~~~~~~~l~~~L~~~g~~v~~~~-~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~-- 91 (241)
+|+++. .+......+...|...|..+.... ++.+....+....++ |++|+ +..+|.+
T Consensus 41 ~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~-----------------d~~i~-iS~sG~t~~ 102 (187)
T 3sho_A 41 HVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLTEGGSTLTITLANLRPT-----------------DLMIG-VSVWRYLRD 102 (187)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHHTTCCEEEECCCTHHHHHHHHTCCTT-----------------EEEEE-ECCSSCCHH
T ss_pred EEEEEecCchHHHHHHHHHHHHhcCCCEEEecCCchhHHHHHhcCCCC-----------------CEEEE-EeCCCCCHH
Confidence 565554 556666777778888898888777 566655544332222 24443 4555543
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPS 120 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~ 120 (241)
-+++++..++. .+++|.+|+.....
T Consensus 103 ~~~~~~~ak~~----g~~vi~IT~~~~s~ 127 (187)
T 3sho_A 103 TVAALAGAAER----GVPTMALTDSSVSP 127 (187)
T ss_dssp HHHHHHHHHHT----TCCEEEEESCTTSH
T ss_pred HHHHHHHHHHC----CCCEEEEeCCCCCc
Confidence 45677777764 57999999876544
No 230
>4e5v_A Putative THUA-like protein; THUA-like proteins, trehalose utilisation, structural genomi center for structural genomics, JCSG; 1.75A {Parabacteroides merdae}
Probab=70.05 E-value=6.7 Score=32.40 Aligned_cols=81 Identities=17% Similarity=0.214 Sum_probs=48.6
Q ss_pred CcceEEEEeCC-----HHHHHHHHHHhhcCC-CEEEEECCHHHH--HHHhcccCCCCCCCCCCCCCCcccccccEEEEeC
Q 026239 14 SQFHVLAVDDS-----IIDRKLIERLLKTSS-YQVTTVDSGSKA--LEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDY 85 (241)
Q Consensus 14 ~~~~ILiVdd~-----~~~~~~l~~~L~~~g-~~v~~~~~~~~a--l~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~ 85 (241)
..++||||... +.....|..+|+..| |.|++..+.... ...+. + .=..||+||++.
T Consensus 3 ~~~kvLiv~G~~~H~~~~~~~~l~~~l~~~g~f~V~~~~d~~~~~d~~~f~---~-------------~L~~~D~vV~~~ 66 (281)
T 4e5v_A 3 KPIKTLLITGQNNHNWQVSHVVLKQILENSGRFDVDFVISPEQGKDMSGFV---L-------------DFSPYQLVVLDY 66 (281)
T ss_dssp CCEEEEEEESCCSSCHHHHHHHHHHHHHHTTSEEEEEEECCCTTSCCTTCC---C-------------CCTTCSEEEECC
T ss_pred CceEEEEEcCCCCCChHHHHHHHHHHHHhcCCEEEEEEeCCccccchhHHh---h-------------hhhcCCEEEEeC
Confidence 46899999763 556678999999888 999987653100 00110 0 112488999988
Q ss_pred CCCCCCH--H-HHHHHHHhcCCCCCCcEEEEcc
Q 026239 86 CMPGMTG--Y-DLLKKIKESSSLRDIPVVIMSS 115 (241)
Q Consensus 86 ~mp~~~g--~-~ll~~ir~~~~~~~ipvIils~ 115 (241)
.+...+. . .+.+.++. ...+|++=+
T Consensus 67 ~~~~l~~~~~~~l~~yV~~-----Ggglv~~H~ 94 (281)
T 4e5v_A 67 NGDSWPEETNRRFLEYVQN-----GGGVVIYHA 94 (281)
T ss_dssp CSSCCCHHHHHHHHHHHHT-----TCEEEEEGG
T ss_pred CCCcCCHHHHHHHHHHHHc-----CCCEEEEec
Confidence 6544432 1 23344443 456777743
No 231
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=69.72 E-value=49 Score=27.73 Aligned_cols=108 Identities=10% Similarity=0.068 Sum_probs=67.2
Q ss_pred CcceEEEEeCCHH-HHHHHHHHhhcCCCEEEEEC--CHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 14 SQFHVLAVDDSII-DRKLIERLLKTSSYQVTTVD--SGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 14 ~~~~ILiVdd~~~-~~~~l~~~L~~~g~~v~~~~--~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
..++++|+.+.+. ....+..+.+..+-.+.... +.++...++.. .|++|+-... +.
T Consensus 284 ~~~~l~i~G~g~~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~--------------------adv~v~ps~~-e~ 342 (439)
T 3fro_A 284 QEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGS--------------------VDFVIIPSYF-EP 342 (439)
T ss_dssp GGEEEEEECCCCHHHHHHHHHHHHHCTTEEEECSCCCHHHHHHHHTT--------------------CSEEEECBSC-CS
T ss_pred CCeEEEEEcCCChhHHHHHHHHHhhcCCEEEEcCCCCHHHHHHHHHH--------------------CCEEEeCCCC-CC
Confidence 3577777776542 33556666666662233333 55666666642 3577765443 44
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
-|..+++.+.. .+|||+. ... ...+.+..| .+++..|.+.++|.+.+..++.
T Consensus 343 ~~~~~~EAma~-----G~Pvi~s-~~~---~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~ 394 (439)
T 3fro_A 343 FGLVALEAMCL-----GAIPIAS-AVG---GLRDIITNE-TGILVKAGDPGELANAILKALE 394 (439)
T ss_dssp SCHHHHHHHHT-----TCEEEEE-SST---HHHHHCCTT-TCEEECTTCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHC-----CCCeEEc-CCC---CcceeEEcC-ceEEeCCCCHHHHHHHHHHHHh
Confidence 56677777764 6788764 222 233445566 8999999999999887777665
No 232
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=69.52 E-value=46 Score=28.68 Aligned_cols=107 Identities=9% Similarity=0.037 Sum_probs=64.1
Q ss_pred cceEEEEeCCH-HHHHHHHHHhhcCCCEEE-EEC-CHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 15 QFHVLAVDDSI-IDRKLIERLLKTSSYQVT-TVD-SGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 15 ~~~ILiVdd~~-~~~~~l~~~L~~~g~~v~-~~~-~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
.++++|+.+.+ .....+..+....+-.|. ... +.++...++.. .|++++-.. ...-
T Consensus 320 ~~~l~ivG~g~~~~~~~l~~~~~~~~~~v~~~~g~~~~~~~~~~~~--------------------adv~v~pS~-~E~~ 378 (485)
T 1rzu_A 320 GGRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAG--------------------CDAIIIPSR-FEPC 378 (485)
T ss_dssp TCEEEEEECBCHHHHHHHHHHHHHTTTTEEEEESCCHHHHHHHHHH--------------------CSEEEECCS-CCSS
T ss_pred CceEEEEeCCchHHHHHHHHHHHhCCCcEEEecCCCHHHHHHHHhc--------------------CCEEEECcc-cCCC
Confidence 56777777654 245556666555443343 222 33333344432 357776443 2344
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhc---------ccccccCCCCHHHHHHhhHHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEG---------AEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~G---------a~~~l~KP~~~~~L~~~~~~l~ 151 (241)
|+.+++.+.. .+|||+... ....+.+..| ..+|+..|.+.++|...+..++
T Consensus 379 ~~~~lEAma~-----G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ll 438 (485)
T 1rzu_A 379 GLTQLYALRY-----GCIPVVART----GGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTV 438 (485)
T ss_dssp CSHHHHHHHH-----TCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHHHHHHH
T ss_pred CHHHHHHHHC-----CCCEEEeCC----CChhheecccccccccccCCcceEeCCCCHHHHHHHHHHHH
Confidence 6667777764 678886432 2344555666 7899999999999988777766
No 233
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=69.46 E-value=18 Score=31.36 Aligned_cols=92 Identities=20% Similarity=0.241 Sum_probs=57.7
Q ss_pred HHHHHHHHhhcCCCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC-----CCCCHHHHHHHH
Q 026239 27 DRKLIERLLKTSSYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM-----PGMTGYDLLKKI 99 (241)
Q Consensus 27 ~~~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m-----p~~~g~~ll~~i 99 (241)
..+.++.+-+..+.-|. .+.+.++|..+.. ..+|.|++.-.- .+...++++..+
T Consensus 240 ~~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~-------------------aGad~I~vs~~ggr~~~~g~~~~~~l~~v 300 (392)
T 2nzl_A 240 SWEDIKWLRRLTSLPIVAKGILRGDDAREAVK-------------------HGLNGILVSNHGARQLDGVPATIDVLPEI 300 (392)
T ss_dssp CHHHHHHHC--CCSCEEEEEECCHHHHHHHHH-------------------TTCCEEEECCGGGTSSTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCEEEEecCCHHHHHHHHH-------------------cCCCEEEeCCCCCCcCCCCcChHHHHHHH
Confidence 34445555444443333 4667777766653 235577774221 123457788888
Q ss_pred HhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc-cCCC
Q 026239 100 KESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF-LKPV 138 (241)
Q Consensus 100 r~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l-~KP~ 138 (241)
++.-. .++|||+-.+-.+...+.+++.+||+.+. -.|+
T Consensus 301 ~~av~-~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr~~ 339 (392)
T 2nzl_A 301 VEAVE-GKVEVFLDGGVRKGTDVLKALALGAKAVFVGRPI 339 (392)
T ss_dssp HHHHT-TSSEEEECSSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHcC-CCCEEEEECCCCCHHHHHHHHHhCCCeeEECHHH
Confidence 75422 26999998888899999999999999874 4454
No 234
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=69.40 E-value=12 Score=26.32 Aligned_cols=113 Identities=11% Similarity=-0.050 Sum_probs=50.7
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCc---ccccccEEEEeCCCCCCCH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMH---QEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~---~~~~~dlIilD~~mp~~~g 92 (241)
.+|+|+.-. .....+...|...|+.|+.++...+.++.+..............+... .-..+|+||.-..-+....
T Consensus 7 ~~v~I~G~G-~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~ 85 (144)
T 2hmt_A 7 KQFAVIGLG-RFGGSIVKELHRMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAS 85 (144)
T ss_dssp CSEEEECCS-HHHHHHHHHHHHTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSCHHHH
T ss_pred CcEEEECCC-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCchHHH
Confidence 467778763 444455555656677776655444444433221100000000000000 1235788887443211123
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
..++..++.... . .||+.+. +........+.|++..+
T Consensus 86 ~~~~~~~~~~~~--~-~ii~~~~--~~~~~~~l~~~g~~~vi 122 (144)
T 2hmt_A 86 TLTTLLLKELDI--P-NIWVKAQ--NYYHHKVLEKIGADRII 122 (144)
T ss_dssp HHHHHHHHHTTC--S-EEEEECC--SHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHcCC--C-eEEEEeC--CHHHHHHHHHcCCCEEE
Confidence 445555665432 2 4554443 23333445567886543
No 235
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=69.29 E-value=33 Score=28.57 Aligned_cols=65 Identities=15% Similarity=0.142 Sum_probs=43.6
Q ss_pred EEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHH
Q 026239 43 TTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRI 122 (241)
Q Consensus 43 ~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~ 122 (241)
+.+++.+++.+.+.. .+|+|.+|- |+--++-+.++.... + ..|..|+.-+.+.+
T Consensus 214 VEvdtlde~~eAl~a-------------------GaD~I~LDn----~~~~~l~~av~~i~~--~-v~ieaSGGI~~~~i 267 (298)
T 3gnn_A 214 IEVETLDQLRTALAH-------------------GARSVLLDN----FTLDMMRDAVRVTEG--R-AVLEVSGGVNFDTV 267 (298)
T ss_dssp EEESSHHHHHHHHHT-------------------TCEEEEEES----CCHHHHHHHHHHHTT--S-EEEEEESSCSTTTH
T ss_pred EEeCCHHHHHHHHHc-------------------CCCEEEECC----CCHHHHHHHHHHhCC--C-CeEEEEcCCCHHHH
Confidence 468999998888752 357999996 333333333333321 3 45567788888888
Q ss_pred HHHHHhccccc
Q 026239 123 SRCLEEGAEEF 133 (241)
Q Consensus 123 ~~~l~~Ga~~~ 133 (241)
....+.|+|.|
T Consensus 268 ~~~a~tGVD~i 278 (298)
T 3gnn_A 268 RAIAETGVDRI 278 (298)
T ss_dssp HHHHHTTCSEE
T ss_pred HHHHHcCCCEE
Confidence 88889999655
No 236
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=69.23 E-value=15 Score=29.04 Aligned_cols=62 Identities=13% Similarity=0.208 Sum_probs=45.2
Q ss_pred EEEEeCC----CCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHh-----c-ccccc------cCCCCHHHH
Q 026239 80 LVITDYC----MPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEE-----G-AEEFF------LKPVRLSDL 143 (241)
Q Consensus 80 lIilD~~----mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~-----G-a~~~l------~KP~~~~~L 143 (241)
+++.+.. +.+. ++++++++++.. ++|||.-.+-.+.+.+.++++. | +++++ ..++++.++
T Consensus 161 i~~t~~~~~g~~~g~-~~~~i~~l~~~~---~iPvia~GGI~~~~d~~~~~~~~~~~~G~adgv~vgsal~~~~~~~~~~ 236 (241)
T 1qo2_A 161 IVHTEIEKDGTLQEH-DFSLTKKIAIEA---EVKVLAAGGISSENSLKTAQKVHTETNGLLKGVIVGRAFLEGILTVEVM 236 (241)
T ss_dssp EEEEETTHHHHTCCC-CHHHHHHHHHHH---TCEEEEESSCCSHHHHHHHHHHHHHTTTSEEEEEECHHHHTTSSCHHHH
T ss_pred EEEEeecccccCCcC-CHHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHhcccccCCeEeEEEeeHHHHcCCCCHHHH
Confidence 5555543 2232 489999998754 7899998888888999999988 9 88764 357777665
Q ss_pred HH
Q 026239 144 NK 145 (241)
Q Consensus 144 ~~ 145 (241)
.+
T Consensus 237 ~~ 238 (241)
T 1qo2_A 237 KR 238 (241)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 237
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=68.95 E-value=26 Score=29.36 Aligned_cols=107 Identities=19% Similarity=0.202 Sum_probs=59.9
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhc-CCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKT-SSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~-~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
...+++|.||.--..-...+..+.+. .+++++ .++...+..+.+... +.+-..+
T Consensus 10 ~~~~~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~-------------------~~~~~~~----- 65 (354)
T 3q2i_A 10 TDRKIRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVER-------------------TGARGHA----- 65 (354)
T ss_dssp CSSCEEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHH-------------------HCCEEES-----
T ss_pred CCCcceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHH-------------------cCCceeC-----
Confidence 44679999999876666666655555 478876 455433333333210 1121111
Q ss_pred CCHHHHHHHHHhcCCCCCCcEEEEccCC--ChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 90 MTGYDLLKKIKESSSLRDIPVVIMSSEN--VPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 90 ~~g~~ll~~ir~~~~~~~ipvIils~~~--~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
+--+++. .. ++-+|+++... ..+.+..|+++|..=|+-||+ +.++..++....
T Consensus 66 -~~~~ll~---~~----~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~a~~~~~~~~l~~~a 122 (354)
T 3q2i_A 66 -SLTDMLA---QT----DADIVILTTPSGLHPTQSIECSEAGFHVMTEKPMATRWEDGLEMVKAA 122 (354)
T ss_dssp -CHHHHHH---HC----CCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHH
T ss_pred -CHHHHhc---CC----CCCEEEECCCcHHHHHHHHHHHHCCCCEEEeCCCcCCHHHHHHHHHHH
Confidence 2223333 21 34445544432 355677899999999999996 455655554433
No 238
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=68.91 E-value=29 Score=28.07 Aligned_cols=40 Identities=15% Similarity=0.168 Sum_probs=29.8
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
++++++|+.. ++||++=.+-.+++.+.. +..|||+++.=.
T Consensus 196 ~~v~~vr~~~---~~pv~vG~GI~t~e~~~~-~~~gADgvIVGS 235 (262)
T 2ekc_A 196 KKVEEYRELC---DKPVVVGFGVSKKEHARE-IGSFADGVVVGS 235 (262)
T ss_dssp HHHHHHHHHC---CSCEEEESSCCSHHHHHH-HHTTSSEEEECH
T ss_pred HHHHHHHhhc---CCCEEEeCCCCCHHHHHH-HHcCCCEEEECH
Confidence 6788888753 689877666666777766 889999987643
No 239
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=68.31 E-value=28 Score=28.06 Aligned_cols=20 Identities=15% Similarity=0.092 Sum_probs=13.3
Q ss_pred HHHHHHHhhcCCCEEEEECC
Q 026239 28 RKLIERLLKTSSYQVTTVDS 47 (241)
Q Consensus 28 ~~~l~~~L~~~g~~v~~~~~ 47 (241)
...+...++..||.+..+.+
T Consensus 46 ~~gi~~~a~~~g~~~~~~~~ 65 (305)
T 3huu_A 46 LNGINQACNVRGYSTRMTVS 65 (305)
T ss_dssp HHHHHHHHHHHTCEEEECCC
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 34455666777998887653
No 240
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=68.30 E-value=42 Score=26.44 Aligned_cols=69 Identities=17% Similarity=0.200 Sum_probs=46.6
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCE--EE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQ--VT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~--v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
..+|..||-++......+..+...|+. |. ...+..+.+..+. ....||+|++|...+ +
T Consensus 88 ~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~-----------------~~~~fD~V~~d~~~~--~ 148 (248)
T 3tfw_A 88 DGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG-----------------ECPAFDLIFIDADKP--N 148 (248)
T ss_dssp TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC-----------------SCCCCSEEEECSCGG--G
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC-----------------CCCCeEEEEECCchH--H
Confidence 578999999999999888888877653 54 4566666554331 123588999987433 3
Q ss_pred HHHHHHHHHhc
Q 026239 92 GYDLLKKIKES 102 (241)
Q Consensus 92 g~~ll~~ir~~ 102 (241)
-..+++.+...
T Consensus 149 ~~~~l~~~~~~ 159 (248)
T 3tfw_A 149 NPHYLRWALRY 159 (248)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 34566666554
No 241
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=68.01 E-value=26 Score=30.04 Aligned_cols=92 Identities=21% Similarity=0.287 Sum_probs=59.4
Q ss_pred HHHHHHHHhhcCCCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC----C-CCCCHHHHHHHH
Q 026239 27 DRKLIERLLKTSSYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC----M-PGMTGYDLLKKI 99 (241)
Q Consensus 27 ~~~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~----m-p~~~g~~ll~~i 99 (241)
..+.++.+-+..+.-|. .+.+.++|..+.. ..+|.|++.-+ + .+...++++..+
T Consensus 217 ~~~~i~~lr~~~~~PvivK~v~~~e~a~~a~~-------------------~Gad~I~vs~~ggr~~~~g~~~~~~l~~v 277 (368)
T 2nli_A 217 SPRDIEEIAGHSGLPVFVKGIQHPEDADMAIK-------------------RGASGIWVSNHGARQLYEAPGSFDTLPAI 277 (368)
T ss_dssp CHHHHHHHHHHSSSCEEEEEECSHHHHHHHHH-------------------TTCSEEEECCGGGTSCSSCCCHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCEEEEcCCCHHHHHHHHH-------------------cCCCEEEEcCCCcCCCCCCCChHHHHHHH
Confidence 34445555444444333 4577777766653 23557766431 1 123467888888
Q ss_pred HhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc-CCC
Q 026239 100 KESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL-KPV 138 (241)
Q Consensus 100 r~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~-KP~ 138 (241)
+.... .++|||+-++-.+...+.+++..||+.+.. .|+
T Consensus 278 ~~~v~-~~ipVia~GGI~~g~D~~kalalGAd~V~iGr~~ 316 (368)
T 2nli_A 278 AERVN-KRVPIVFDSGVRRGEHVAKALASGADVVALGRPV 316 (368)
T ss_dssp HHHHT-TSSCEEECSSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred HHHhC-CCCeEEEECCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 76432 269999999988999999999999998754 444
No 242
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=68.00 E-value=28 Score=27.83 Aligned_cols=92 Identities=12% Similarity=0.145 Sum_probs=56.3
Q ss_pred HHHhhcCCC-EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcE
Q 026239 32 ERLLKTSSY-QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKIKESSSLRDIPV 110 (241)
Q Consensus 32 ~~~L~~~g~-~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipv 110 (241)
...|...+. -|....+.++++...+..- +..+++|=+. +-..++++.++.|++..+ + .+
T Consensus 28 ~~~l~~~~vv~Vir~~~~~~a~~~a~al~---------------~gGi~~iEvt--~~t~~a~e~I~~l~~~~~--~-~~ 87 (232)
T 4e38_A 28 NNQLKALKVIPVIAIDNAEDIIPLGKVLA---------------ENGLPAAEIT--FRSDAAVEAIRLLRQAQP--E-ML 87 (232)
T ss_dssp HHHHHHHCEEEEECCSSGGGHHHHHHHHH---------------HTTCCEEEEE--TTSTTHHHHHHHHHHHCT--T-CE
T ss_pred HHHHHhCCEEEEEEcCCHHHHHHHHHHHH---------------HCCCCEEEEe--CCCCCHHHHHHHHHHhCC--C-CE
Confidence 344444453 4556677777777664321 2234455444 445578999999998643 4 34
Q ss_pred EEEccCCChHHHHHHHHhcccccccCCCCHHHHH
Q 026239 111 VIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLN 144 (241)
Q Consensus 111 Iils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~ 144 (241)
|-...--+.+.+..++++||+ |+.-|....++.
T Consensus 88 iGaGTVlt~~~a~~Ai~AGA~-fIvsP~~~~~vi 120 (232)
T 4e38_A 88 IGAGTILNGEQALAAKEAGAT-FVVSPGFNPNTV 120 (232)
T ss_dssp EEEECCCSHHHHHHHHHHTCS-EEECSSCCHHHH
T ss_pred EeECCcCCHHHHHHHHHcCCC-EEEeCCCCHHHH
Confidence 444445568889999999995 555675444443
No 243
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=67.68 E-value=8.5 Score=31.82 Aligned_cols=93 Identities=16% Similarity=0.214 Sum_probs=56.7
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
.++|.||-........+...|+..|+.|.......+.++ .+|+||+ -|.|| .
T Consensus 29 ~mki~iv~~~~~~~~~l~~~L~~~g~~v~~~~~~~~~~~-----------------------~~DlvIv----lGGDG-T 80 (278)
T 1z0s_A 29 GMRAAVVYKTDGHVKRIEEALKRLEVEVELFNQPSEELE-----------------------NFDFIVS----VGGDG-T 80 (278)
T ss_dssp -CEEEEEESSSTTHHHHHHHHHHTTCEEEEESSCCGGGG-----------------------GSSEEEE----EECHH-H
T ss_pred ceEEEEEeCCcHHHHHHHHHHHHCCCEEEEccccccccC-----------------------CCCEEEE----ECCCH-H
Confidence 467888854222266678888889998876554322111 2457765 25566 4
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLM 151 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~ 151 (241)
+++..+.... . +||+-+.. |-.+||. +++++++...+..++
T Consensus 81 ~L~aa~~~~~-~-~PilGIN~-------------G~lGFLt-~~~~~~~~~~l~~l~ 121 (278)
T 1z0s_A 81 ILRILQKLKR-C-PPIFGINT-------------GRVGLLT-HASPENFEVELKKAV 121 (278)
T ss_dssp HHHHHTTCSS-C-CCEEEEEC-------------SSSCTTC-CBBTTBCHHHHHHHH
T ss_pred HHHHHHHhCC-C-CcEEEECC-------------CCCcccc-ccCHHHHHHHHHHHH
Confidence 6666665443 2 89987764 5667887 466666666665554
No 244
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=67.65 E-value=14 Score=30.74 Aligned_cols=44 Identities=20% Similarity=0.228 Sum_probs=30.6
Q ss_pred CCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 107 DIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 107 ~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
++-+|+++.. .-.+.+..|+++|.+=|+-||+ +.++..+++...
T Consensus 72 ~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a 119 (312)
T 3o9z_A 72 GVDYLSIASPNHLHYPQIRMALRLGANALSEKPLVLWPEEIARLKELE 119 (312)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSCHHHHHHHHHHH
T ss_pred CCcEEEECCCchhhHHHHHHHHHCCCeEEEECCCCCCHHHHHHHHHHH
Confidence 4555555443 3466688899999999999996 556666655543
No 245
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=67.42 E-value=34 Score=28.49 Aligned_cols=44 Identities=16% Similarity=0.123 Sum_probs=29.7
Q ss_pred CCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 107 DIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 107 ~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
++-+|+++.. .-.+.+..|+++|..=|+-||+ +.++..+++...
T Consensus 82 ~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a 129 (340)
T 1zh8_A 82 LVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELS 129 (340)
T ss_dssp CCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHH
T ss_pred CCCEEEEeCCchHHHHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHH
Confidence 3444544443 3456788899999999999997 566666655544
No 246
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=67.05 E-value=26 Score=26.07 Aligned_cols=82 Identities=17% Similarity=0.193 Sum_probs=45.3
Q ss_pred eEEEEeC--CHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC--CH
Q 026239 17 HVLAVDD--SIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM--TG 92 (241)
Q Consensus 17 ~ILiVdd--~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~--~g 92 (241)
+|+++.- +......+...|...|+.+....+.......+....++ |++|+ +...|. +-
T Consensus 51 ~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~-----------------d~vI~-iS~sG~t~~~ 112 (183)
T 2xhz_A 51 KVVVMGMGASGHIGRKMAATFASTGTPSFFVHPGEAAHGDLGMVTPQ-----------------DVVIA-ISNSGESSEI 112 (183)
T ss_dssp CEEEEECHHHHHHHHHHHHHHHTTTCCEEECCTTHHHHHTSTTCCTT-----------------CEEEE-ECSSSCCHHH
T ss_pred eEEEEeecHHHHHHHHHHHHHHhcCceEEEeCchHHhhhhhccCCCC-----------------CEEEE-EeCCCCCHHH
Confidence 5655553 34455556666666788777666554433222211111 23332 334444 34
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPS 120 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~ 120 (241)
+++++..++. .+++|.+|+.....
T Consensus 113 ~~~~~~ak~~----g~~vi~IT~~~~s~ 136 (183)
T 2xhz_A 113 TALIPVLKRL----HVPLICITGRPESS 136 (183)
T ss_dssp HHHHHHHHTT----TCCEEEEESCTTSH
T ss_pred HHHHHHHHHC----CCCEEEEECCCCCh
Confidence 6667777764 67999999976544
No 247
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=66.64 E-value=9.3 Score=31.10 Aligned_cols=54 Identities=7% Similarity=0.158 Sum_probs=35.9
Q ss_pred HHHHHHHhcCCCCCCcEEEEccC------CChHHHHHHHHhcccccccCCCCHHHHHHhhHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSE------NVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPH 149 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~------~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~ 149 (241)
++++.+++... .+|+|+|+-. .......+|.++|++++|.--+.+++...+...
T Consensus 77 ~~~~~~~~~r~--~~Pivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~ 136 (252)
T 3tha_A 77 SVFELLARIKT--KKALVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKE 136 (252)
T ss_dssp HHHHHHHHCCC--SSEEEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHH
T ss_pred HHHHHHHHHhc--CCCEEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHH
Confidence 34444444332 4899999864 345567889999999999876766664444333
No 248
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=66.35 E-value=11 Score=27.46 Aligned_cols=40 Identities=23% Similarity=0.295 Sum_probs=29.7
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
.++++.+++. .++++++|+.........+-..|...|+..
T Consensus 42 ~~~l~~l~~~----g~~~~i~T~~~~~~~~~~l~~~gl~~~~~~ 81 (162)
T 2p9j_A 42 GIGIKLLQKM----GITLAVISGRDSAPLITRLKELGVEEIYTG 81 (162)
T ss_dssp HHHHHHHHTT----TCEEEEEESCCCHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHC----CCEEEEEeCCCcHHHHHHHHHcCCHhhccC
Confidence 4788888864 578999998876665555567788888754
No 249
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=66.24 E-value=58 Score=27.28 Aligned_cols=95 Identities=15% Similarity=0.179 Sum_probs=61.5
Q ss_pred ceEEEEe----CCHHHHHHHHHHhhcC-CCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC
Q 026239 16 FHVLAVD----DSIIDRKLIERLLKTS-SYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP 88 (241)
Q Consensus 16 ~~ILiVd----d~~~~~~~l~~~L~~~-g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp 88 (241)
..++.++ +.....+.++.+-+.. +.-|. .+.+.++|..+... .+|.|++... +
T Consensus 121 ~~~i~i~~~~G~~~~~~~~i~~lr~~~~~~~vi~G~v~s~e~A~~a~~a-------------------Gad~Ivvs~h-g 180 (336)
T 1ypf_A 121 PEYITIDIAHGHSNAVINMIQHIKKHLPESFVIAGNVGTPEAVRELENA-------------------GADATKVGIG-P 180 (336)
T ss_dssp CSEEEEECSSCCSHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHH-------------------TCSEEEECSS-C
T ss_pred CCEEEEECCCCCcHHHHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHc-------------------CCCEEEEecC-C
Confidence 4555554 4445556666665554 34333 25677777666532 3557776322 2
Q ss_pred CC------------C--HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 89 GM------------T--GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 89 ~~------------~--g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
+. . .++++..++... ++|||.-.+-.+...+.+++.+||+..
T Consensus 181 G~~~~~~~~~~~g~~g~~~~~l~~v~~~~---~ipVIa~GGI~~g~Dv~kalalGAdaV 236 (336)
T 1ypf_A 181 GKVCITKIKTGFGTGGWQLAALRWCAKAA---SKPIIADGGIRTNGDVAKSIRFGATMV 236 (336)
T ss_dssp STTCHHHHHHSCSSTTCHHHHHHHHHHTC---SSCEEEESCCCSTHHHHHHHHTTCSEE
T ss_pred CceeecccccCcCCchhHHHHHHHHHHHc---CCcEEEeCCCCCHHHHHHHHHcCCCEE
Confidence 11 1 467788887643 799999888888999999999999876
No 250
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=66.07 E-value=26 Score=23.16 Aligned_cols=55 Identities=20% Similarity=0.318 Sum_probs=36.4
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCC----hHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENV----PSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~----~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
++++.++.. .-|++++..... .+...++.+.|+..-++|..++++|...++..++
T Consensus 42 diiksmkdn----gkplvvfvngasqndvnefqneakkegvsydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 42 DIIKSMKDN----GKPLVVFVNGASQNDVNEFQNEAKKEGVSYDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp HHHHHHTTC----CSCEEEEECSCCHHHHHHHHHHHHHHTCEEEEEECCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhc----CCeEEEEecCcccccHHHHHHHHHhcCcchhhhccCCHHHHHHHHHHHHH
Confidence 445555543 346666654433 3345577889999889999999999765555544
No 251
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=65.66 E-value=33 Score=27.40 Aligned_cols=74 Identities=18% Similarity=0.219 Sum_probs=51.0
Q ss_pred hcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-CC-CHHHHHHHHHhcCCCCCCcEEE
Q 026239 36 KTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-GM-TGYDLLKKIKESSSLRDIPVVI 112 (241)
Q Consensus 36 ~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-~~-~g~~ll~~ir~~~~~~~ipvIi 112 (241)
...|..+. -+.+..|+...+.. .+|+|=+ .| +. .|.++++.++.- ++++|++.
T Consensus 124 ~~~gi~~ipGv~TptEi~~A~~~-------------------Gad~vK~---FPa~~~gG~~~lkal~~p--~p~ip~~p 179 (232)
T 4e38_A 124 QEIGIDIVPGVNNPSTVEAALEM-------------------GLTTLKF---FPAEASGGISMVKSLVGP--YGDIRLMP 179 (232)
T ss_dssp HHHTCEEECEECSHHHHHHHHHT-------------------TCCEEEE---CSTTTTTHHHHHHHHHTT--CTTCEEEE
T ss_pred HHcCCCEEcCCCCHHHHHHHHHc-------------------CCCEEEE---CcCccccCHHHHHHHHHH--hcCCCeee
Confidence 33465544 56789998888743 2445554 55 33 389999999974 34899986
Q ss_pred EccCCChHHHHHHHHhcccccc
Q 026239 113 MSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 113 ls~~~~~~~~~~~l~~Ga~~~l 134 (241)
..+ -+.+.+.+++++|+...+
T Consensus 180 tGG-I~~~n~~~~l~aGa~~~v 200 (232)
T 4e38_A 180 TGG-ITPSNIDNYLAIPQVLAC 200 (232)
T ss_dssp BSS-CCTTTHHHHHTSTTBCCE
T ss_pred EcC-CCHHHHHHHHHCCCeEEE
Confidence 544 457888999999987654
No 252
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=65.28 E-value=29 Score=28.92 Aligned_cols=103 Identities=14% Similarity=0.187 Sum_probs=54.7
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
+++|.||.--..-...+..+.+..++.++ .++...+..+.+... ..+ -+..|+
T Consensus 4 ~~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~-----------------~g~-~~~~~~-------- 57 (344)
T 3euw_A 4 TLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEA-----------------NGA-EAVASP-------- 57 (344)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHT-----------------TTC-EEESSH--------
T ss_pred ceEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH-----------------cCC-ceeCCH--------
Confidence 58999999877666656555555577776 455434433333211 000 111111
Q ss_pred HHHHHHHhcCCCCCCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPH 149 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~ 149 (241)
+.+-.. .++-+|+++.. ...+.+..|+++|..=|+-||+ +.++..++...
T Consensus 58 ---~~~l~~---~~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~ 111 (344)
T 3euw_A 58 ---DEVFAR---DDIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEK 111 (344)
T ss_dssp ---HHHTTC---SCCCEEEECSCGGGHHHHHHHHHHTTCCEEECSCSCSCHHHHHHHHHH
T ss_pred ---HHHhcC---CCCCEEEEeCCchhhHHHHHHHHHcCCcEEEECCCCCCHHHHHHHHHH
Confidence 122111 13334444432 3355677888999888888995 45555554443
No 253
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=65.26 E-value=13 Score=29.65 Aligned_cols=56 Identities=13% Similarity=0.180 Sum_probs=39.3
Q ss_pred ccEEEEeCCCCCCCH-------HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 78 VNLVITDYCMPGMTG-------YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 78 ~dlIilD~~mp~~~g-------~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
+|+|++=..-||.+| ++-++++|+... +++|. +.+.-+.+.+..+.++||+-++.=
T Consensus 139 ~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~--~~~I~-VdGGI~~~ti~~~~~aGAd~~V~G 201 (227)
T 1tqx_A 139 INTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYK--NLNIQ-VDGGLNIETTEISASHGANIIVAG 201 (227)
T ss_dssp CSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCT--TCEEE-EESSCCHHHHHHHHHHTCCEEEES
T ss_pred cCEEEEeeeccCCCCcccchHHHHHHHHHHHhcc--CCeEE-EECCCCHHHHHHHHHcCCCEEEEe
Confidence 568877666676554 566777777543 55554 556666889999999999987543
No 254
>1izc_A Macrophomate synthase intermolecular diels-aldera; TIM-barrel, pyruvate Mg(II) complex, lyase; 1.70A {Macrophoma commelinae} SCOP: c.1.12.5
Probab=65.22 E-value=62 Score=27.31 Aligned_cols=73 Identities=14% Similarity=0.168 Sum_probs=47.4
Q ss_pred cccEEEEeCCCCCCCHHHHHHHHHhcC--CCCCCcEEEEccCCChHHHHHHHHhccccccc-CCCCHHHHHHhhHH
Q 026239 77 GVNLVITDYCMPGMTGYDLLKKIKESS--SLRDIPVVIMSSENVPSRISRCLEEGAEEFFL-KPVRLSDLNKLKPH 149 (241)
Q Consensus 77 ~~dlIilD~~mp~~~g~~ll~~ir~~~--~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~-KP~~~~~L~~~~~~ 149 (241)
.+|.||+|+.-...+--.+...|+... .....+++|=+...++..+..+++.|++++++ |=-+.+++..+...
T Consensus 63 GaD~vilDlEha~~~~e~~~~~l~a~~~~~~~~~~~~VRv~~~~~~di~~~LdaGa~gImlP~V~saee~~~~~~~ 138 (339)
T 1izc_A 63 KPDFVWIDVEHGMFNRLELHDAIHAAQHHSEGRSLVIVRVPKHDEVSLSTALDAGAAGIVIPHVETVEEVREFVKE 138 (339)
T ss_dssp CCSEEEEETTTSCCCHHHHHHHHHHHHHHTTTCSEEEEECCTTCHHHHHHHHHHTCSEEEETTCCCHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHhhhcCCCCCeEEEEeCCCCHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHH
Confidence 366999999765445444544444321 11136677777777888999999999987543 33467787665544
No 255
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=65.16 E-value=39 Score=27.58 Aligned_cols=38 Identities=18% Similarity=0.352 Sum_probs=31.5
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
+++++.+++.. ++|||...+-.+.+.+.+++.+||+.+
T Consensus 230 ~~~i~~i~~~~---~ipvia~GGI~~~~d~~~~l~~GAd~V 267 (311)
T 1ep3_A 230 LKLIHQVAQDV---DIPIIGMGGVANAQDVLEMYMAGASAV 267 (311)
T ss_dssp HHHHHHHHTTC---SSCEEECSSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHhc---CCCEEEECCcCCHHHHHHHHHcCCCEE
Confidence 47888888743 799998888778999999999999875
No 256
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=65.07 E-value=46 Score=27.62 Aligned_cols=32 Identities=13% Similarity=0.175 Sum_probs=22.1
Q ss_pred ChHHHHHHHHhcccccccCCC--CHHHHHHhhHH
Q 026239 118 VPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPH 149 (241)
Q Consensus 118 ~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~ 149 (241)
..+.+..|+++|..=|+-||+ +.++..+++..
T Consensus 79 h~~~~~~al~~Gk~vl~EKP~a~~~~e~~~l~~~ 112 (344)
T 3mz0_A 79 HESSVLKAIKAQKYVFCEKPLATTAEGCMRIVEE 112 (344)
T ss_dssp HHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHH
Confidence 455677888999888888996 45555554443
No 257
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=64.92 E-value=16 Score=29.34 Aligned_cols=16 Identities=13% Similarity=0.079 Sum_probs=8.8
Q ss_pred HHHHHhhcCCCEEEEE
Q 026239 30 LIERLLKTSSYQVTTV 45 (241)
Q Consensus 30 ~l~~~L~~~g~~v~~~ 45 (241)
.+...+...||.+..+
T Consensus 31 gi~~~a~~~g~~~~~~ 46 (294)
T 3qk7_A 31 WIGIELGKRGLDLLLI 46 (294)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHCCCEEEEE
Confidence 3444555667766543
No 258
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=64.89 E-value=40 Score=27.89 Aligned_cols=42 Identities=12% Similarity=0.208 Sum_probs=25.6
Q ss_pred cCcceEEEEeCCHHHHHHHHHHh-hcCCCEEE-EECCHHHHHHH
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLL-KTSSYQVT-TVDSGSKALEF 54 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L-~~~g~~v~-~~~~~~~al~~ 54 (241)
..+++|.||.--..-...+..+. ...+++++ .++...+..+.
T Consensus 6 ~~~~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~ 49 (346)
T 3cea_A 6 RKPLRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEW 49 (346)
T ss_dssp CCCEEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHH
T ss_pred CCcceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHH
Confidence 45689999998766555555555 34577765 45544444433
No 259
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=64.85 E-value=53 Score=26.33 Aligned_cols=80 Identities=13% Similarity=0.138 Sum_probs=46.2
Q ss_pred ceEEEEeCCHHHHHHHHHHhh-cCCCEEEEE-CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLK-TSSYQVTTV-DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~-~~g~~v~~~-~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
++|.|+.-.-.+-..+.+.+. ..++++..+ +...+.-+.+. ..+| |++|+.-|. ...
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-------------------~~~D-vvIDfT~p~-a~~ 59 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-------------------GNTE-VVIDFTHPD-VVM 59 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-------------------TTCC-EEEECSCTT-THH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-------------------cCCc-EEEEccChH-HHH
Confidence 478888865555555555554 448888743 32221111121 1245 778998776 457
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPS 120 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~ 120 (241)
+.+....+. .+|+|+-|...+.+
T Consensus 60 ~~~~~a~~~----g~~~VigTTG~~~e 82 (245)
T 1p9l_A 60 GNLEFLIDN----GIHAVVGTTGFTAE 82 (245)
T ss_dssp HHHHHHHHT----TCEEEECCCCCCHH
T ss_pred HHHHHHHHc----CCCEEEcCCCCCHH
Confidence 777766553 57888866544444
No 260
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=64.81 E-value=39 Score=26.74 Aligned_cols=51 Identities=10% Similarity=0.172 Sum_probs=35.4
Q ss_pred ccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 78 VNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 78 ~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
++.|-+++.+- + -++++.++.. .++|.+.|- ++++.+.++++.|++++++-
T Consensus 185 ~~~i~~~~~~~--~-~~~v~~~~~~----G~~v~~wTv-n~~~~~~~l~~~GvdgI~TD 235 (247)
T 2otd_A 185 CVSIHLNHKLL--D-KARVMQLKDA----GLRILVYTV-NKPQHAAELLRWGVDCICTD 235 (247)
T ss_dssp CSEEEEEGGGC--C-HHHHHHHHHT----TCEEEEECC-CCHHHHHHHHHHTCSEEEES
T ss_pred CeEEecChHhC--C-HHHHHHHHHC----CCEEEEEcc-CCHHHHHHHHHcCCCEEEeC
Confidence 34555555432 1 4677777764 578888885 56778889999999988763
No 261
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=64.74 E-value=35 Score=29.28 Aligned_cols=120 Identities=13% Similarity=0.083 Sum_probs=61.4
Q ss_pred CcceEEEEe--CCHHH---HHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCC-CCCCCC--CCCCcccccccEEEEeC
Q 026239 14 SQFHVLAVD--DSIID---RKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDG-QSSHSV--YPNMHQEVGVNLVITDY 85 (241)
Q Consensus 14 ~~~~ILiVd--d~~~~---~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~-~~~~~~--~~~~~~~~~~dlIilD~ 85 (241)
..-+|+||- +++.. ...|..+|...|+.|..-....+.+.......... ...... .........+|+||+
T Consensus 37 ~~k~I~iv~K~~~~~~~~~~~~l~~~L~~~~~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlvI~-- 114 (365)
T 3pfn_A 37 SPKSVLVIKKMRDASLLQPFKELCTHLMEENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFIIC-- 114 (365)
T ss_dssp CCCEEEEEECTTCGGGHHHHHHHHHHHHHTSCEEEEEHHHHHSHHHHHCSTTHHHHHHCEEECTTTCCCTTTCSEEEE--
T ss_pred CCCEEEEEecCCCHHHHHHHHHHHHHHHHCCCEEEEehHHhhhhccccccccccccccccccccChhhcccCCCEEEE--
Confidence 345788885 33333 34455556667998876544444332221100000 000000 000002345788886
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHHH
Q 026239 86 CMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 86 ~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
-|.|| .+|...+.... ..+||+-+. .|-.+||. +++.+++...+..++.+
T Consensus 115 --lGGDG-T~L~aa~~~~~-~~~PvlGiN-------------~G~LGFLt-~~~~~~~~~~l~~vl~g 164 (365)
T 3pfn_A 115 --LGGDG-TLLYASSLFQG-SVPPVMAFH-------------LGSLGFLT-PFSFENFQSQVTQVIEG 164 (365)
T ss_dssp --ESSTT-HHHHHHHHCSS-SCCCEEEEE-------------SSSCTTTC-CEESTTHHHHHHHHHHS
T ss_pred --EcChH-HHHHHHHHhcc-CCCCEEEEc-------------CCCCccce-eecHHHHHHHHHHHHcC
Confidence 26677 34554544322 368988664 36678888 77778887777766643
No 262
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=64.57 E-value=19 Score=26.84 Aligned_cols=113 Identities=16% Similarity=0.186 Sum_probs=56.7
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcC-CCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCc----ccccccEEEEeCCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTS-SYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMH----QEVGVNLVITDYCMPG 89 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~-g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~----~~~~~dlIilD~~mp~ 89 (241)
..+|+|+.-... -..+...|... |+.|+.++...+.++.+.......-.+....+... .-..+|+||+- .|+
T Consensus 39 ~~~v~IiG~G~~-G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~--~~~ 115 (183)
T 3c85_A 39 HAQVLILGMGRI-GTGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLA--MPH 115 (183)
T ss_dssp TCSEEEECCSHH-HHHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEEC--CSS
T ss_pred CCcEEEECCCHH-HHHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEe--CCC
Confidence 458899986544 44555566666 88888776545544444321110000000000000 11247888873 343
Q ss_pred CC-HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 90 MT-GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 90 ~~-g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
.. ...++..++...+ ...||+.+. +......+.+.|++..+
T Consensus 116 ~~~~~~~~~~~~~~~~--~~~ii~~~~--~~~~~~~l~~~G~~~vi 157 (183)
T 3c85_A 116 HQGNQTALEQLQRRNY--KGQIAAIAE--YPDQLEGLLESGVDAAF 157 (183)
T ss_dssp HHHHHHHHHHHHHTTC--CSEEEEEES--SHHHHHHHHHHTCSEEE
T ss_pred hHHHHHHHHHHHHHCC--CCEEEEEEC--CHHHHHHHHHcCCCEEE
Confidence 22 2344556666543 556665543 34555566678886443
No 263
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=64.32 E-value=24 Score=29.23 Aligned_cols=64 Identities=13% Similarity=0.151 Sum_probs=41.1
Q ss_pred cEEEEeCCC------CCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 79 NLVITDYCM------PGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 79 dlIilD~~m------p~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
|++|+-... ++.-|..+++.+.. .+|||+...... .+.+..| .+++..|-+.++|.+.+..++.
T Consensus 274 d~~v~ps~~~~~~~~~e~~~~~~~Ea~a~-----G~PvI~~~~~~~----~e~i~~~-~g~~~~~~d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 274 DIFAMPARTRGGGLDVEGLGIVYLEAQAC-----GVPVIAGTSGGA----PETVTPA-TGLVVEGSDVDKLSELLIELLD 343 (394)
T ss_dssp SEEEECCCCBGGGTBCCSSCHHHHHHHHT-----TCCEEECSSTTG----GGGCCTT-TEEECCTTCHHHHHHHHHHHHT
T ss_pred CEEEecCccccccccccccCcHHHHHHHc-----CCCEEEeCCCCh----HHHHhcC-CceEeCCCCHHHHHHHHHHHHh
Confidence 577764433 14446677777664 678886332222 2334567 8899999999999887777654
No 264
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=64.25 E-value=65 Score=27.15 Aligned_cols=64 Identities=11% Similarity=0.140 Sum_probs=42.0
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 79 NLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 79 dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
|++|+-.. .+.-|..+++.+.. .+|||+... .. ..+.+..|..+++..|.+.++|...+..++.
T Consensus 327 dv~v~ps~-~e~~~~~~~Eama~-----G~PvI~~~~-~~---~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~ 390 (438)
T 3c48_A 327 DIVAVPSF-NESFGLVAMEAQAS-----GTPVIAARV-GG---LPIAVAEGETGLLVDGHSPHAWADALATLLD 390 (438)
T ss_dssp SEEEECCS-CCSSCHHHHHHHHT-----TCCEEEESC-TT---HHHHSCBTTTEEEESSCCHHHHHHHHHHHHH
T ss_pred CEEEECcc-ccCCchHHHHHHHc-----CCCEEecCC-CC---hhHHhhCCCcEEECCCCCHHHHHHHHHHHHc
Confidence 57666443 23346677777764 678876432 22 2344556778899999999999877777664
No 265
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=64.25 E-value=41 Score=26.81 Aligned_cols=51 Identities=14% Similarity=0.128 Sum_probs=35.9
Q ss_pred ccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 78 VNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 78 ~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
++.+-+++.+-. -++++.++.. .++|.+.|- ++++.+.++++.|++++++-
T Consensus 188 ~~~i~~~~~~~~---~~~v~~~~~~----G~~v~~WTv-n~~~~~~~l~~~GVdgIiTD 238 (252)
T 3qvq_A 188 CAGLHIHQSFFD---VQQVSDIKAA----GYKVLAFTI-NDESLALKLYNQGLDAVFSD 238 (252)
T ss_dssp CSEEEEEGGGCC---HHHHHHHHHT----TCEEEEECC-CCHHHHHHHHHTTCCEEEES
T ss_pred CeEEecchhhCC---HHHHHHHHHC----CCEEEEEcC-CCHHHHHHHHHcCCCEEEeC
Confidence 345555544322 3677777764 578988876 56788899999999999873
No 266
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=64.05 E-value=21 Score=32.36 Aligned_cols=63 Identities=17% Similarity=0.358 Sum_probs=45.5
Q ss_pred EEEEeCCCCCC---CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHH-hcccccc------cCCCCHHHHHH
Q 026239 80 LVITDYCMPGM---TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLE-EGAEEFF------LKPVRLSDLNK 145 (241)
Q Consensus 80 lIilD~~mp~~---~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~-~Ga~~~l------~KP~~~~~L~~ 145 (241)
+++.|+.-.++ -.+++++.|++.. ++|||.-.+-.+.+.+.++++ .|+++.+ ..++...++.+
T Consensus 469 il~t~~~~dG~~~G~d~~li~~l~~~~---~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~a~~~~~~~~~e~~~ 541 (555)
T 1jvn_A 469 ILLNCIDKDGSNSGYDLELIEHVKDAV---KIPVIASSGAGVPEHFEEAFLKTRADACLGAGMFHRGEFTVNDVKE 541 (555)
T ss_dssp EEECCGGGTTTCSCCCHHHHHHHHHHC---SSCEEECSCCCSHHHHHHHHHHSCCSEEEESHHHHTTSCCHHHHHH
T ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHhC---CccEEEECCCCCHHHHHHHHHhcCChHHHHHHHHHcCCCCHHHHHH
Confidence 55556543332 2378999999754 799998888888999999998 7988764 45777776644
No 267
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=64.00 E-value=24 Score=26.90 Aligned_cols=67 Identities=9% Similarity=-0.019 Sum_probs=44.2
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCC-EEEE-ECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSY-QVTT-VDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~-~v~~-~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
.+|..||-++...+..+..+...++ .+.. ..+..+.+. . ....||+|++|.........
T Consensus 78 ~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~---~----------------~~~~fD~V~~~~p~~~~~~~ 138 (202)
T 2fpo_A 78 AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLA---Q----------------KGTPHNIVFVDPPFRRGLLE 138 (202)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHS---S----------------CCCCEEEEEECCSSSTTTHH
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHh---h----------------cCCCCCEEEECCCCCCCcHH
Confidence 4899999999998888888877765 4543 344444321 1 12358999998653334555
Q ss_pred HHHHHHHh
Q 026239 94 DLLKKIKE 101 (241)
Q Consensus 94 ~ll~~ir~ 101 (241)
++++.+..
T Consensus 139 ~~l~~l~~ 146 (202)
T 2fpo_A 139 ETINLLED 146 (202)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 67777765
No 268
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=63.93 E-value=9 Score=30.50 Aligned_cols=56 Identities=11% Similarity=0.118 Sum_probs=36.0
Q ss_pred CHHHHHHHHHhcCCCCCCcEE--EEccCCChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVV--IMSSENVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvI--ils~~~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
.|.++++.||+.. +.|+. +|+. +....+..+.++||+++..-.. ..+...+.++.+
T Consensus 49 ~g~~~v~~lr~~~---~~~~~vhlmv~-dp~~~i~~~~~aGadgv~vh~e~~~~~~~~~~~~~i 108 (230)
T 1tqj_A 49 IGPLIVDAIRPLT---KKTLDVHLMIV-EPEKYVEDFAKAGADIISVHVEHNASPHLHRTLCQI 108 (230)
T ss_dssp BCHHHHHHHGGGC---CSEEEEEEESS-SGGGTHHHHHHHTCSEEEEECSTTTCTTHHHHHHHH
T ss_pred hhHHHHHHHHhhc---CCcEEEEEEcc-CHHHHHHHHHHcCCCEEEECcccccchhHHHHHHHH
Confidence 3779999999753 45666 6774 3345678899999998865544 333344444333
No 269
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=63.75 E-value=57 Score=27.94 Aligned_cols=68 Identities=13% Similarity=0.141 Sum_probs=42.8
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCC---C------EEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeC
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSS---Y------QVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDY 85 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g---~------~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~ 85 (241)
.+|.+||-|+...+..++.|...+ + .+. ...|+.+.++.+.. ....||+||+|.
T Consensus 212 ~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~----------------~~~~fDvII~D~ 275 (364)
T 2qfm_A 212 KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK----------------EGREFDYVINDL 275 (364)
T ss_dssp SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH----------------HTCCEEEEEEEC
T ss_pred CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhc----------------cCCCceEEEECC
Confidence 678899999988888888875321 1 233 45677766654311 123589999998
Q ss_pred CC-CC------CCHHHHHHHH
Q 026239 86 CM-PG------MTGYDLLKKI 99 (241)
Q Consensus 86 ~m-p~------~~g~~ll~~i 99 (241)
.- |. .-..++.+.+
T Consensus 276 ~d~P~~~~p~~L~t~eFy~~~ 296 (364)
T 2qfm_A 276 TAVPISTSPEEDSTWEFLRLI 296 (364)
T ss_dssp CSSCCCCC----CHHHHHHHH
T ss_pred CCcccCcCchhhhHHHHHHHH
Confidence 65 41 2345677766
No 270
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=63.49 E-value=51 Score=28.38 Aligned_cols=63 Identities=10% Similarity=0.103 Sum_probs=42.6
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhc---------ccccccCCCCHHHHHHhhHH
Q 026239 79 NLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEG---------AEEFFLKPVRLSDLNKLKPH 149 (241)
Q Consensus 79 dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~G---------a~~~l~KP~~~~~L~~~~~~ 149 (241)
|++++-.. ...-|+.+++.+.. .+|||+... ....+.+..| ..+|+..|.+.++|...+..
T Consensus 368 dv~v~pS~-~E~~g~~~lEAma~-----G~PvI~s~~----gg~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~i~~ 437 (485)
T 2qzs_A 368 DVILVPSR-FEPCGLTQLYGLKY-----GTLPLVRRT----GGLADTVSDCSLENLADGVASGFVFEDSNAWSLLRAIRR 437 (485)
T ss_dssp SEEEECCS-CCSSCSHHHHHHHH-----TCEEEEESS----HHHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHHHHH
T ss_pred CEEEECCc-cCCCcHHHHHHHHC-----CCCEEECCC----CCccceeccCccccccccccceEEECCCCHHHHHHHHHH
Confidence 57666443 33446667777764 678886532 2344556666 78999999999999877777
Q ss_pred HH
Q 026239 150 LM 151 (241)
Q Consensus 150 l~ 151 (241)
++
T Consensus 438 ll 439 (485)
T 2qzs_A 438 AF 439 (485)
T ss_dssp HH
T ss_pred HH
Confidence 66
No 271
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=63.47 E-value=24 Score=28.57 Aligned_cols=97 Identities=12% Similarity=0.169 Sum_probs=57.9
Q ss_pred EEEEeCCHHHHHHHHHHhhcCCCEEE--EEC-CHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH--
Q 026239 18 VLAVDDSIIDRKLIERLLKTSSYQVT--TVD-SGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG-- 92 (241)
Q Consensus 18 ILiVdd~~~~~~~l~~~L~~~g~~v~--~~~-~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g-- 92 (241)
++|.|=.......+...++..|..+. .+. +..+-++.+.....+ .|.+ ....|.+|
T Consensus 120 ~IipDLP~eE~~~~~~~~~~~Gl~~I~lvaP~t~~eRi~~ia~~a~g------------------FiY~-Vs~~GvTG~~ 180 (252)
T 3tha_A 120 LIVPELSFEESDDLIKECERYNIALITLVSVTTPKERVKKLVKHAKG------------------FIYL-LASIGITGTK 180 (252)
T ss_dssp EECTTCCGGGCHHHHHHHHHTTCEECEEEETTSCHHHHHHHHTTCCS------------------CEEE-ECCSCSSSCS
T ss_pred EEeCCCCHHHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHhCCC------------------eEEE-EecCCCCCcc
Confidence 44555444455667777888887544 232 446666666544332 3333 22222222
Q ss_pred -------HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 93 -------YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 93 -------~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
.++++++|+.. ++||++=.+-.+++.+..+. .+||+.+.-.
T Consensus 181 ~~~~~~~~~~v~~vr~~~---~~Pv~vGfGIst~e~a~~~~-~~ADGVIVGS 228 (252)
T 3tha_A 181 SVEEAILQDKVKEIRSFT---NLPIFVGFGIQNNQDVKRMR-KVADGVIVGT 228 (252)
T ss_dssp HHHHHHHHHHHHHHHTTC---CSCEEEESSCCSHHHHHHHT-TTSSEEEECH
T ss_pred cCCCHHHHHHHHHHHHhc---CCcEEEEcCcCCHHHHHHHH-hcCCEEEECH
Confidence 35788888753 78999877777788776654 4699886643
No 272
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=63.39 E-value=24 Score=26.80 Aligned_cols=68 Identities=15% Similarity=0.005 Sum_probs=42.9
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCC---EEEE-ECCHHHHHHHhcccCCCCCCCCCCCCCCccccc-ccEEEEeCCCCCC
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSY---QVTT-VDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVG-VNLVITDYCMPGM 90 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~---~v~~-~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~-~dlIilD~~mp~~ 90 (241)
.+|..||-++......+..+...|+ .+.. ..+..+.+..+ .... ||+|++|......
T Consensus 77 ~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~------------------~~~~~fD~I~~~~~~~~~ 138 (201)
T 2ift_A 77 KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQP------------------QNQPHFDVVFLDPPFHFN 138 (201)
T ss_dssp SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSC------------------CSSCCEEEEEECCCSSSC
T ss_pred CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhh------------------ccCCCCCEEEECCCCCCc
Confidence 5799999999888888888777665 4543 34443322110 1235 8999998654333
Q ss_pred CHHHHHHHHHh
Q 026239 91 TGYDLLKKIKE 101 (241)
Q Consensus 91 ~g~~ll~~ir~ 101 (241)
+..++++.+..
T Consensus 139 ~~~~~l~~~~~ 149 (201)
T 2ift_A 139 LAEQAISLLCE 149 (201)
T ss_dssp HHHHHHHHHHH
T ss_pred cHHHHHHHHHh
Confidence 44567777754
No 273
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=63.25 E-value=49 Score=28.28 Aligned_cols=42 Identities=17% Similarity=0.158 Sum_probs=32.0
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
..+.+..++... .++|||+-.+-.+...+.+++.+||+.+..
T Consensus 265 t~~~L~~v~~~~--~~ipvia~GGI~~g~Dv~KaLalGAdaV~i 306 (365)
T 3sr7_A 265 TAQVLLNAQPLM--DKVEILASGGIRHPLDIIKALVLGAKAVGL 306 (365)
T ss_dssp HHHHHHHHGGGT--TTSEEEECSSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHhc--CCCeEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 345666665543 278999888888899999999999998744
No 274
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=63.12 E-value=56 Score=28.89 Aligned_cols=44 Identities=18% Similarity=0.292 Sum_probs=31.2
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
..++++..+.......++|||.-.+-.+...+.+++.+||+.+.
T Consensus 324 p~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~ 367 (494)
T 1vrd_A 324 PQLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVM 367 (494)
T ss_dssp CHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred cHHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEE
Confidence 34455555543211127999998888899999999999998764
No 275
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=63.05 E-value=64 Score=26.70 Aligned_cols=90 Identities=14% Similarity=0.225 Sum_probs=54.5
Q ss_pred EEEEeCCHHH----HHHHHHHhhcCCC--EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 18 VLAVDDSIID----RKLIERLLKTSSY--QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 18 ILiVdd~~~~----~~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
|+|.|.+... ...++.+-+..+. -...+++.+++.+.+.. .+|.|.+|- ++
T Consensus 182 vlikdnhi~~~Gti~~ai~~~r~~~~~~kI~vev~tlee~~eA~~a-------------------GaD~I~ld~----~~ 238 (296)
T 1qap_A 182 FLIKENHIIASGSVRQAVEKAFWLHPDVPVEVEVENLDELDDALKA-------------------GADIIMLDN----FN 238 (296)
T ss_dssp EEECHHHHHHHSSHHHHHHHHHHHSTTSCEEEEESSHHHHHHHHHT-------------------TCSEEEESS----CC
T ss_pred EEEEcCCeeccCCHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHc-------------------CCCEEEECC----CC
Confidence 5666655543 3444444444443 34478888888777642 256999985 34
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
- +.++.+.+... .+++|. .|+.-+.+.+....+.|++.|
T Consensus 239 ~-e~l~~~v~~~~-~~~~I~-ASGGIt~~~i~~~a~~GvD~i 277 (296)
T 1qap_A 239 T-DQMREAVKRVN-GQARLE-VSGNVTAETLREFAETGVDFI 277 (296)
T ss_dssp H-HHHHHHHHTTC-TTCCEE-ECCCSCHHHHHHHHHTTCSEE
T ss_pred H-HHHHHHHHHhC-CCCeEE-EECCCCHHHHHHHHHcCCCEE
Confidence 3 44444443322 245554 566668999999999999655
No 276
>2yzr_A Pyridoxal biosynthesis lyase PDXS; redox protein, pyridoxal phosphate, structural genomi NPPSFA; 2.30A {Methanocaldococcus jannaschii}
Probab=62.94 E-value=6.9 Score=33.18 Aligned_cols=42 Identities=21% Similarity=0.426 Sum_probs=32.2
Q ss_pred CHHHHHHHHHhcCCCCCCcEEE--EccCCChHHHHHHHHhccccccc
Q 026239 91 TGYDLLKKIKESSSLRDIPVVI--MSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIi--ls~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.++++++.+++.. .+|||+ .++-.+++.+..+++.||++++.
T Consensus 227 ~~lell~~i~~~~---~IPVV~VAeGGI~Tpeda~~~l~~GaDgV~V 270 (330)
T 2yzr_A 227 GLYEVLLEVKKLG---RLPVVNFAAGGVATPADAALMMQLGSDGVFV 270 (330)
T ss_dssp HHHHHHHHHHHHT---SCSSEEEECSCCCSHHHHHHHHHTTCSCEEE
T ss_pred chHHHHHHHHHhC---CCCeEEEEECCCCCHHHHHHHHHcCcCEEee
Confidence 3569999998853 689863 33444689999999999999864
No 277
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=62.94 E-value=14 Score=29.62 Aligned_cols=55 Identities=9% Similarity=0.146 Sum_probs=43.3
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 79 NLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 79 dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
.+|.+|. .......++++++++... ++|+++=-+-.+.+.+.++++ ||+..+.=.
T Consensus 165 ~~Vyl~~-~G~~~~~~~i~~i~~~~~--~~Pv~vGgGI~s~e~a~~~~~-gAd~VIVGS 219 (234)
T 2f6u_A 165 PIIYIEY-SGTYGNPELVAEVKKVLD--KARLFYGGGIDSREKAREMLR-YADTIIVGN 219 (234)
T ss_dssp SEEEEEC-TTSCCCHHHHHHHHHHCS--SSEEEEESCCCSHHHHHHHHH-HSSEEEECH
T ss_pred CEEEEeC-CCCcchHHHHHHHHHhCC--CCCEEEEecCCCHHHHHHHHh-CCCEEEECh
Confidence 5888888 544456889999998642 689988777888899999888 999987643
No 278
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=62.89 E-value=21 Score=29.20 Aligned_cols=54 Identities=7% Similarity=-0.039 Sum_probs=36.7
Q ss_pred CCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHh--cccccccCCCCHHHHHHhhHHHHH
Q 026239 89 GMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEE--GAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 89 ~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~--Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+.-|+.+++.+.. .+|||.... . ...+.+.. |..+|+..| +.++|...+..++.
T Consensus 252 E~~~~~~~EAma~-----G~PvI~s~~-~---~~~e~~~~~~~~~g~~~~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 252 EPGATVVSEAAVS-----GTPVVGTGN-G---CLAEIVPSVGEVVGYGTDF-APDEARRTLAGLPA 307 (342)
T ss_dssp CCCCHHHHHHHHT-----TCCEEECCT-T---THHHHGGGGEEECCSSSCC-CHHHHHHHHHTSCC
T ss_pred cCccHHHHHHHhc-----CCCEEEcCC-C---ChHHHhcccCCCceEEcCC-CHHHHHHHHHHHHH
Confidence 4456777777764 678875432 2 24455667 788999999 99999776665543
No 279
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=62.74 E-value=56 Score=27.44 Aligned_cols=90 Identities=12% Similarity=0.168 Sum_probs=53.8
Q ss_pred EEEEeCCHHHH----HHHHHHhhcCCC--EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 18 VLAVDDSIIDR----KLIERLLKTSSY--QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 18 ILiVdd~~~~~----~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
|||-|.+.... ..++.+-+..++ -.+.+++.+++.+.+.. .+|+|.+|- ++
T Consensus 205 vlikdnHi~~~G~i~~Av~~ar~~~p~~kIeVEVdtldea~eAl~a-------------------GaD~I~LDn----~~ 261 (320)
T 3paj_A 205 YLIKENHIIACGGIRQAISTAKQLNPGKPVEVETETLAELEEAISA-------------------GADIIMLDN----FS 261 (320)
T ss_dssp EEECHHHHHHHTSHHHHHHHHHHHSTTSCEEEEESSHHHHHHHHHT-------------------TCSEEEEES----CC
T ss_pred hccHHHHHHHhCCHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHc-------------------CCCEEEECC----CC
Confidence 56666653322 233333223333 23478999998888752 256999996 23
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
--+ ++++..... .+ ..|..|+.-+.+.+....+.|+|.|
T Consensus 262 ~~~-l~~av~~l~-~~-v~ieaSGGIt~~~I~~~a~tGVD~i 300 (320)
T 3paj_A 262 LEM-MREAVKINA-GR-AALENSGNITLDNLKECAETGVDYI 300 (320)
T ss_dssp HHH-HHHHHHHHT-TS-SEEEEESSCCHHHHHHHHTTTCSEE
T ss_pred HHH-HHHHHHHhC-CC-CeEEEECCCCHHHHHHHHHcCCCEE
Confidence 333 333332211 13 4566788888999999999999655
No 280
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=62.55 E-value=25 Score=27.13 Aligned_cols=86 Identities=13% Similarity=0.077 Sum_probs=49.8
Q ss_pred CcceEEEEeCCHHHHHH----HHHHhhcCCCEEE-EECC---HHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeC
Q 026239 14 SQFHVLAVDDSIIDRKL----IERLLKTSSYQVT-TVDS---GSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDY 85 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~----l~~~L~~~g~~v~-~~~~---~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~ 85 (241)
...+|+++.|+....-. +...|. ++.|. ..-+ ..+.+..+.... .....+|+||+-+
T Consensus 37 ~~~~i~~~GDSit~g~~~~~~~~~~l~--~~~v~n~g~~G~t~~~~~~~~~~~~-------------l~~~~pd~vvi~~ 101 (232)
T 1es9_A 37 KEPEVVFIGDSLVQLMHQCEIWRELFS--PLHALNFGIGGDSTQHVLWRLENGE-------------LEHIRPKIVVVWV 101 (232)
T ss_dssp CCCSEEEEESHHHHTHHHHSCHHHHTG--GGCEEEEECTTCCHHHHHHHHHTTT-------------TTTCCCSEEEEEC
T ss_pred CCCCEEEEechHhhccCccccHHHHCC--CCceEEeecccccHHHHHHHHhcCc-------------cccCCCCEEEEEe
Confidence 56899999999776533 344454 34443 3333 334444443210 0123578999977
Q ss_pred CCCCCC---------HHHHHHHHHhcCCCCCCcEEEEccC
Q 026239 86 CMPGMT---------GYDLLKKIKESSSLRDIPVVIMSSE 116 (241)
Q Consensus 86 ~mp~~~---------g~~ll~~ir~~~~~~~ipvIils~~ 116 (241)
...+.. --.+++.+++..+ ..+||+++..
T Consensus 102 G~ND~~~~~~~~~~~l~~~i~~l~~~~p--~~~ii~~~~~ 139 (232)
T 1es9_A 102 GTNNHGHTAEQVTGGIKAIVQLVNERQP--QARVVVLGLL 139 (232)
T ss_dssp CTTCTTSCHHHHHHHHHHHHHHHHHHST--TCEEEEECCC
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHHCC--CCeEEEecCC
Confidence 666542 1246677777643 6788888754
No 281
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=62.48 E-value=18 Score=30.10 Aligned_cols=104 Identities=12% Similarity=0.150 Sum_probs=55.5
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEE-ECCHHHHHH-HhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTT-VDSGSKALE-FLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~-~~~~~~al~-~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
.+++|.||.--..-...+..+.+..++.++. ++...+..+ +..... +.-+. .+
T Consensus 4 ~~~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~------------------~~~~~-------~~ 58 (330)
T 3e9m_A 4 DKIRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELA------------------IPVAY-------GS 58 (330)
T ss_dssp CCEEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTT------------------CCCCB-------SS
T ss_pred CeEEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcC------------------CCcee-------CC
Confidence 4689999998766666665555545777774 443333333 322110 00011 12
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEcc--CCChHHHHHHHHhcccccccCCC--CHHHHHHhhHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSS--ENVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPH 149 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~--~~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~ 149 (241)
--+++. . . ++-+|+++. ....+.+..|+++|..=|+-||+ +.++..++...
T Consensus 59 ~~~ll~---~-~---~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~e~~~l~~~ 113 (330)
T 3e9m_A 59 YEELCK---D-E---TIDIIYIPTYNQGHYSAAKLALSQGKPVLLEKPFTLNAAEAEELFAI 113 (330)
T ss_dssp HHHHHH---C-T---TCSEEEECCCGGGHHHHHHHHHHTTCCEEECSSCCSSHHHHHHHHHH
T ss_pred HHHHhc---C-C---CCCEEEEcCCCHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHH
Confidence 222322 1 1 333444433 33455677889999988999996 45565555443
No 282
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=62.41 E-value=18 Score=27.72 Aligned_cols=89 Identities=12% Similarity=0.131 Sum_probs=50.4
Q ss_pred cCcceEEEEeCCHHH----------HHHHHHHhhcCCCEEEEEC--------------------CHHHHHHHhcccCCCC
Q 026239 13 ESQFHVLAVDDSIID----------RKLIERLLKTSSYQVTTVD--------------------SGSKALEFLGLHEDDG 62 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~----------~~~l~~~L~~~g~~v~~~~--------------------~~~~al~~l~~~~~d~ 62 (241)
....+|+++.|+... ...+...|...++.+.++. +..+.+..+...-
T Consensus 3 ~~~~~i~~~GDSit~G~~~~~~~~~~~~l~~~l~~~~~~v~~~~~~~~G~~~~~~~~n~g~~G~~~~~~~~~l~~~l--- 79 (215)
T 2vpt_A 3 SKTIKIMPVGDSCTEGMGGGEMGSYRTELYRLLTQAGLSIDFVGSQRSGPSSLPDKDHEGHSGWTIPQIASNINNWL--- 79 (215)
T ss_dssp -CEEEEEEEESHHHHTCSSSTTCTTHHHHHHHHHHTTCEEEECCSEECCCTTCSCCEEEECTTCCHHHHHHHHHHHH---
T ss_pred CCceEEEecccccccCCCCCCCCchHHHHHHHHHHcCCceEEEecccCCCCCCCCCCccCcCchhHHHHHHHHHHHh---
Confidence 456899999998653 4667777776676654431 1233333332100
Q ss_pred CCCCCCCCCCcccccccEEEEeCCCCCC---------CHHHHHHHHHhcCCCCCCcEEEEccCC
Q 026239 63 QSSHSVYPNMHQEVGVNLVITDYCMPGM---------TGYDLLKKIKESSSLRDIPVVIMSSEN 117 (241)
Q Consensus 63 ~~~~~~~~~~~~~~~~dlIilD~~mp~~---------~g~~ll~~ir~~~~~~~ipvIils~~~ 117 (241)
....+|+||+.+...+. +--.+++.++...+ ..+||+++...
T Consensus 80 -----------~~~~pd~vvi~~G~ND~~~~~~~~~~~l~~li~~i~~~~p--~~~ii~~~~~p 130 (215)
T 2vpt_A 80 -----------NTHNPDVVFLWIGGNDLLLNGNLNATGLSNLIDQIFTVKP--NVTLFVADYYP 130 (215)
T ss_dssp -----------HHHCCSEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHHCT--TCEEEEECCCS
T ss_pred -----------hccCCCEEEEEccccccCCCCChhHHHHHHHHHHHHHhCC--CCEEEEEeCCC
Confidence 11245699986643221 11246777887654 77888876543
No 283
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=62.26 E-value=30 Score=27.48 Aligned_cols=19 Identities=11% Similarity=0.139 Sum_probs=11.9
Q ss_pred HHHHHHHhhcCCCEEEEEC
Q 026239 28 RKLIERLLKTSSYQVTTVD 46 (241)
Q Consensus 28 ~~~l~~~L~~~g~~v~~~~ 46 (241)
...+...++..||.+..+.
T Consensus 32 ~~gi~~~a~~~g~~~~~~~ 50 (292)
T 3k4h_A 32 IRGISSFAHVEGYALYMST 50 (292)
T ss_dssp HHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHcCCEEEEEe
Confidence 3445556667788777654
No 284
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=62.22 E-value=19 Score=29.16 Aligned_cols=66 Identities=18% Similarity=0.233 Sum_probs=43.5
Q ss_pred EEEEeCCCCCC---CHHHHHHHHHhcCC-CCCCcEEEEccCCChHHHHHHHHh--ccccc--------ccCC-CCHHHHH
Q 026239 80 LVITDYCMPGM---TGYDLLKKIKESSS-LRDIPVVIMSSENVPSRISRCLEE--GAEEF--------FLKP-VRLSDLN 144 (241)
Q Consensus 80 lIilD~~mp~~---~g~~ll~~ir~~~~-~~~ipvIils~~~~~~~~~~~l~~--Ga~~~--------l~KP-~~~~~L~ 144 (241)
++++|+.-.++ ..+++++.+++..+ ...+|||.-.+-.+.+.+.++++. |+++. +..| +...++.
T Consensus 174 il~t~i~~dG~~~G~d~eli~~l~~~~~~~~~iPVIasGGi~s~ed~~~l~~~~~G~~gvivg~al~l~~g~~~~~~~~~ 253 (260)
T 2agk_A 174 FLIHAADVEGLCGGIDELLVSKLFEWTKDYDDLKIVYAGGAKSVDDLKLVDELSHGKVDLTFGSSLDIFGGNLVKFEDCC 253 (260)
T ss_dssp EEEEC-------CCCCHHHHHHHHHHHTTCSSCEEEEESCCCCTHHHHHHHHHHTTCEEEECCTTBGGGTCSSBCHHHHH
T ss_pred EEEEeeccccCcCCCCHHHHHHHHHhhcccCCceEEEeCCCCCHHHHHHHHHhcCCCCEEEeeCCHHHcCCCCCCHHHHH
Confidence 67777765332 24789999987530 015899988888889999999988 88773 4445 7777765
Q ss_pred H
Q 026239 145 K 145 (241)
Q Consensus 145 ~ 145 (241)
+
T Consensus 254 ~ 254 (260)
T 2agk_A 254 R 254 (260)
T ss_dssp H
T ss_pred H
Confidence 4
No 285
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=62.18 E-value=49 Score=26.00 Aligned_cols=15 Identities=20% Similarity=0.337 Sum_probs=7.3
Q ss_pred HHHHhhcCCCEEEEE
Q 026239 31 IERLLKTSSYQVTTV 45 (241)
Q Consensus 31 l~~~L~~~g~~v~~~ 45 (241)
+...++..||.+..+
T Consensus 29 i~~~~~~~g~~~~~~ 43 (276)
T 3jy6_A 29 ISSILESRGYIGVLF 43 (276)
T ss_dssp HHHHHHTTTCEEEEE
T ss_pred HHHHHHHCCCEEEEE
Confidence 334444556655543
No 286
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=62.17 E-value=33 Score=28.84 Aligned_cols=106 Identities=19% Similarity=0.185 Sum_probs=57.9
Q ss_pred CcceEEEEeCCHHHHHHHHHHh-hcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCccccccc-EEEEeCCCCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLL-KTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVN-LVITDYCMPGM 90 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L-~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~d-lIilD~~mp~~ 90 (241)
.+++|.||.--..-...+..+. ...+++++ +++...+..+.+... ..+. -+..|
T Consensus 22 ~~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~a~~-----------------~g~~~~~~~~------ 78 (357)
T 3ec7_A 22 MTLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRAQAALDK-----------------YAIEAKDYND------ 78 (357)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHHHHHHHH-----------------HTCCCEEESS------
T ss_pred CeeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHHHHHHHH-----------------hCCCCeeeCC------
Confidence 4589999998877776666666 44578876 444333322222110 0000 12212
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEcc--CCChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSS--ENVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~--~~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
--+++ .. . ++-+|+++. ....+.+..|+++|..=|+-||+ +.++..+++...
T Consensus 79 -~~~ll---~~-~---~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a 134 (357)
T 3ec7_A 79 -YHDLI---ND-K---DVEVVIITASNEAHADVAVAALNANKYVFCEKPLAVTAADCQRVIEAE 134 (357)
T ss_dssp -HHHHH---HC-T---TCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHH
T ss_pred -HHHHh---cC-C---CCCEEEEcCCcHHHHHHHHHHHHCCCCEEeecCccCCHHHHHHHHHHH
Confidence 12232 22 1 333444433 33456677899999998999996 556665555443
No 287
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=62.09 E-value=4.5 Score=31.39 Aligned_cols=45 Identities=18% Similarity=0.148 Sum_probs=27.9
Q ss_pred CHHHHHHHHHhcCCCCCCcEEE--EccCCChHHHHHHHHhcccccccCC
Q 026239 91 TGYDLLKKIKESSSLRDIPVVI--MSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIi--ls~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
.|+++++.||+..+ ++||.+ +........+..+.++||+.++.-.
T Consensus 39 ~g~~~i~~ir~~~~--~~~i~~~~~~~~~~~~~~~~~~~~Gad~v~v~~ 85 (211)
T 3f4w_A 39 EGVNAIKAIKEKYP--HKEVLADAKIMDGGHFESQLLFDAGADYVTVLG 85 (211)
T ss_dssp HTTHHHHHHHHHCT--TSEEEEEEEECSCHHHHHHHHHHTTCSEEEEET
T ss_pred ccHHHHHHHHHhCC--CCEEEEEEEeccchHHHHHHHHhcCCCEEEEeC
Confidence 46788888887633 567653 2222222237788888888776643
No 288
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=62.09 E-value=32 Score=22.96 Aligned_cols=40 Identities=38% Similarity=0.436 Sum_probs=27.4
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCC-CEEEEECCHHHHHHHh
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSS-YQVTTVDSGSKALEFL 55 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g-~~v~~~~~~~~al~~l 55 (241)
+.+|+|+.- ......+...|...| +.|+.++...+.++.+
T Consensus 5 ~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~ 45 (118)
T 3ic5_A 5 RWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVL 45 (118)
T ss_dssp CEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH
T ss_pred cCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH
Confidence 468999998 556666666666678 8888766555545544
No 289
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=61.98 E-value=67 Score=27.42 Aligned_cols=40 Identities=13% Similarity=0.040 Sum_probs=30.8
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
..+..++.... ++|||.-.+-.+...+.+++.+||+.+..
T Consensus 256 ~~l~~v~~~~~--~ipvia~GGI~~~~d~~kal~lGA~~v~i 295 (368)
T 3vkj_A 256 ASIMEVRYSVP--DSFLVGSGGIRSGLDAAKAIALGADIAGM 295 (368)
T ss_dssp HHHHHHHHHST--TCEEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcC--CCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 34556665432 68999888888899999999999998744
No 290
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=61.80 E-value=15 Score=29.41 Aligned_cols=53 Identities=19% Similarity=0.305 Sum_probs=35.6
Q ss_pred ccEEEEeCCCCCCC---HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHH
Q 026239 78 VNLVITDYCMPGMT---GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLS 141 (241)
Q Consensus 78 ~dlIilD~~mp~~~---g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~ 141 (241)
.|+|.+... -+++ -+++++.+|+ .++|+|+|+..++. +..|+|++|.--+..+
T Consensus 34 aD~IelG~S-~g~t~~~~~~~v~~ir~----~~~Pivl~~y~~n~------i~~gvDg~iipdLp~e 89 (234)
T 2f6u_A 34 TDAVMISGT-QNVTYEKARTLIEKVSQ----YGLPIVVEPSDPSN------VVYDVDYLFVPTVLNS 89 (234)
T ss_dssp CSEEEECCC-TTCCHHHHHHHHHHHTT----SCCCEEECCSSCCC------CCCCSSEEEEEEETTB
T ss_pred CCEEEECCC-CCCCHHHHHHHHHHhcC----CCCCEEEecCCcch------hhcCCCEEEEcccCCC
Confidence 458888774 3333 4566777765 28999999988422 2779999987644433
No 291
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=61.60 E-value=22 Score=29.56 Aligned_cols=44 Identities=20% Similarity=0.159 Sum_probs=30.8
Q ss_pred CCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 107 DIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 107 ~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
++-+|+++.. .-.+.+..|+++|.+=|+-||+ +.++..+++...
T Consensus 73 ~vD~V~I~tP~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a 120 (318)
T 3oa2_A 73 ALDYVSICSPNYLHYPHIAAGLRLGCDVICEKPLVPTPEMLDQLAVIE 120 (318)
T ss_dssp SCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHH
T ss_pred CCcEEEECCCcHHHHHHHHHHHHCCCeEEEECCCcCCHHHHHHHHHHH
Confidence 4555555443 3466688899999999999995 566766665543
No 292
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=61.54 E-value=48 Score=24.71 Aligned_cols=86 Identities=17% Similarity=0.214 Sum_probs=48.2
Q ss_pred CcceEEEEeCCHHH--HHHHHHHhhcCCCEEEE-E-C---CHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC
Q 026239 14 SQFHVLAVDDSIID--RKLIERLLKTSSYQVTT-V-D---SGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC 86 (241)
Q Consensus 14 ~~~~ILiVdd~~~~--~~~l~~~L~~~g~~v~~-~-~---~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~ 86 (241)
...+||++.|+... ...+...|... +.|.. . . +....++.+.... ....+|+|++.+.
T Consensus 19 ~~prVl~iGDSit~G~~~~l~~~l~~~-~~v~~~~~~~~~~~~~~~~~~~~~~--------------~~~~pd~Vvi~~G 83 (200)
T 4h08_A 19 DLPHVLLIGNSITRGYYGKVEAALKEK-AYVGRLSNSKSVGDPALIEELAVVL--------------KNTKFDVIHFNNG 83 (200)
T ss_dssp SSCEEEEEESHHHHHHHHHHHHHTTTT-CEEEEEEESCCTTCHHHHHHHHHHH--------------HHSCCSEEEECCC
T ss_pred CCCeEEEEchhHHhhhHHHHHHHhccC-CeEEEEeccCCccHHHHHHHHHHHH--------------hcCCCCeEEEEee
Confidence 34699999999653 34566666543 33432 1 1 1223333332110 1234679999776
Q ss_pred CCCCC--H-------HHHHHHHHhcCCCCCCcEEEEccC
Q 026239 87 MPGMT--G-------YDLLKKIKESSSLRDIPVVIMSSE 116 (241)
Q Consensus 87 mp~~~--g-------~~ll~~ir~~~~~~~ipvIils~~ 116 (241)
..+.. . -.+++.+++..+ +.+||+++..
T Consensus 84 ~ND~~~~~~~~~~~l~~ii~~l~~~~p--~~~ii~~~~~ 120 (200)
T 4h08_A 84 LHGFDYTEEEYDKSFPKLIKIIRKYAP--KAKLIWANTT 120 (200)
T ss_dssp SSCTTSCHHHHHHHHHHHHHHHHHHCT--TCEEEEECCC
T ss_pred eCCCCCCHHHHHHHHHHHHHHHhhhCC--CccEEEeccC
Confidence 65532 1 246777787664 7788887753
No 293
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=61.50 E-value=6.8 Score=30.13 Aligned_cols=31 Identities=10% Similarity=-0.007 Sum_probs=24.1
Q ss_pred EEEEeCCHHHHHHHHHHhhcCCCEEEEECCH
Q 026239 18 VLAVDDSIIDRKLIERLLKTSSYQVTTVDSG 48 (241)
Q Consensus 18 ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~ 48 (241)
|+|||........+.+.|+..|+.+..+...
T Consensus 4 i~iid~~~s~~~~~~~~l~~~G~~~~v~~~~ 34 (195)
T 1qdl_B 4 TLIIDNYDSFVYNIAQIVGELGSYPIVIRND 34 (195)
T ss_dssp EEEEECSCSSHHHHHHHHHHTTCEEEEEETT
T ss_pred EEEEECCCchHHHHHHHHHhCCCEEEEEeCC
Confidence 9999976666667788898899888766543
No 294
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=61.49 E-value=5.2 Score=32.53 Aligned_cols=28 Identities=7% Similarity=-0.079 Sum_probs=24.1
Q ss_pred CCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 107 DIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 107 ~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
++|+|..++-.+.+.+..+.. |+++++.
T Consensus 208 ~~~vIAegGI~s~~dv~~l~~-Ga~gvlV 235 (254)
T 1vc4_A 208 GGVLVAESGYSRKEELKALEG-LFDAVLI 235 (254)
T ss_dssp CSEEEEESCCCSHHHHHTTTT-TCSEEEE
T ss_pred CCeEEEEcCCCCHHHHHHHHc-CCCEEEE
Confidence 578888888888999999999 9999865
No 295
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=61.37 E-value=35 Score=26.02 Aligned_cols=60 Identities=15% Similarity=0.279 Sum_probs=35.8
Q ss_pred ccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHH
Q 026239 78 VNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSD 142 (241)
Q Consensus 78 ~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~ 142 (241)
+++|-+.+..| ++.+.++.+|+..+ .+. +|-++.-.+.+....+.+.||+.+ .-|....+
T Consensus 36 ~~~iev~~~~~--~~~~~i~~ir~~~~-~~~-~ig~~~v~~~~~~~~a~~~Gad~i-v~~~~~~~ 95 (205)
T 1wa3_A 36 VHLIEITFTVP--DADTVIKELSFLKE-KGA-IIGAGTVTSVEQCRKAVESGAEFI-VSPHLDEE 95 (205)
T ss_dssp CCEEEEETTST--THHHHHHHTHHHHH-TTC-EEEEESCCSHHHHHHHHHHTCSEE-ECSSCCHH
T ss_pred CCEEEEeCCCh--hHHHHHHHHHHHCC-CCc-EEEecccCCHHHHHHHHHcCCCEE-EcCCCCHH
Confidence 45665555544 56777888887532 133 333433346677888999999766 55654433
No 296
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=61.26 E-value=22 Score=28.39 Aligned_cols=94 Identities=15% Similarity=0.211 Sum_probs=59.4
Q ss_pred eCCHHHHHHHHHHhhc-CCCEEEE------E--CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC---
Q 026239 22 DDSIIDRKLIERLLKT-SSYQVTT------V--DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG--- 89 (241)
Q Consensus 22 dd~~~~~~~l~~~L~~-~g~~v~~------~--~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~--- 89 (241)
.|..++...++++++. .|..|+. + .+..+|++.|... .++=|++.=.-+.
T Consensus 100 ~dg~iD~~~~~~Li~~a~~~~vTFHRAFD~~~~~d~~~ale~L~~l------------------Gv~rILTSG~~~~~~a 161 (224)
T 2bdq_A 100 SNNHIDTEAIEQLLPATQGLPLVFHMAFDVIPKSDQKKSIDQLVAL------------------GFTRILLHGSSNGEPI 161 (224)
T ss_dssp TTSSBCHHHHHHHHHHHTTCCEEECGGGGGSCTTTHHHHHHHHHHT------------------TCCEEEECSCSSCCCG
T ss_pred CCCCcCHHHHHHHHHHhCCCeEEEECchhccCCcCHHHHHHHHHHc------------------CCCEEECCCCCCCCcH
Confidence 4555677777777754 3566664 4 6778889888543 3557888654444
Q ss_pred CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHH-Hhccccccc
Q 026239 90 MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCL-EEGAEEFFL 135 (241)
Q Consensus 90 ~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l-~~Ga~~~l~ 135 (241)
.+|++.++.+.+... .-..|+..+.-..+.+...+ ..|+..|-.
T Consensus 162 ~~g~~~L~~Lv~~a~--~ri~Im~GgGV~~~Ni~~l~~~tGv~e~H~ 206 (224)
T 2bdq_A 162 IENIKHIKALVEYAN--NRIEIMVGGGVTAENYQYICQETGVKQAHG 206 (224)
T ss_dssp GGGHHHHHHHHHHHT--TSSEEEECSSCCTTTHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHhhC--CCeEEEeCCCCCHHHHHHHHHhhCCCEEcc
Confidence 689999999976432 22334444444455555555 579888743
No 297
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=61.09 E-value=31 Score=27.64 Aligned_cols=20 Identities=20% Similarity=0.047 Sum_probs=13.5
Q ss_pred HHHHHHHhhcCCCEEEEECC
Q 026239 28 RKLIERLLKTSSYQVTTVDS 47 (241)
Q Consensus 28 ~~~l~~~L~~~g~~v~~~~~ 47 (241)
...+...+...||.+..+.+
T Consensus 31 ~~gi~~~a~~~g~~~~~~~~ 50 (295)
T 3hcw_A 31 LLGISETCNQHGYGTQTTVS 50 (295)
T ss_dssp HHHHHHHHHTTTCEEEECCC
T ss_pred HHHHHHHHHHCCCEEEEEcC
Confidence 34556667778998886653
No 298
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=61.01 E-value=29 Score=28.70 Aligned_cols=67 Identities=10% Similarity=0.080 Sum_probs=44.5
Q ss_pred cEEEE-eCCCCCCC-HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHH
Q 026239 79 NLVIT-DYCMPGMT-GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPH 149 (241)
Q Consensus 79 dlIil-D~~mp~~~-g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~ 149 (241)
|.|++ |-++--.. --+.++..|+..+ ..||.+-.. +.+.+.+++++|++...+..++++++.+++..
T Consensus 170 d~vlikdNHi~~~G~i~~Av~~ar~~~~--~~~IeVEv~--tl~ea~eAl~aGaD~I~LDn~~~~~l~~av~~ 238 (287)
T 3tqv_A 170 DAYLIKENHIRSAGGIAKAVTKAKKLDS--NKVVEVEVT--NLDELNQAIAAKADIVMLDNFSGEDIDIAVSI 238 (287)
T ss_dssp SSEEECTTTC----CHHHHHHHHHHHCT--TSCEEEEES--SHHHHHHHHHTTCSEEEEESCCHHHHHHHHHH
T ss_pred cEEEEeHHHHHHhCCHHHHHHHHHhhCC--CCcEEEEeC--CHHHHHHHHHcCCCEEEEcCCCHHHHHHHHHh
Confidence 44444 44433222 2466777777643 678777443 34778899999999999999999998776654
No 299
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=60.86 E-value=24 Score=29.22 Aligned_cols=77 Identities=21% Similarity=0.247 Sum_probs=51.8
Q ss_pred CCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEe-CCCCCC-CHHHHHHHHHhcCCCCCCcEEEEcc
Q 026239 39 SYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITD-YCMPGM-TGYDLLKKIKESSSLRDIPVVIMSS 115 (241)
Q Consensus 39 g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD-~~mp~~-~g~~ll~~ir~~~~~~~ipvIils~ 115 (241)
.+.+. +++|.+++.........- |=|+| +..+|. .++.+++.+++.. ++||.+|..
T Consensus 39 ~~~lEvc~~s~~~a~~A~~gGAdR------------------IELc~~l~~GGlTPS~g~i~~a~~~~---~ipV~vMIR 97 (287)
T 3iwp_A 39 GFLMEVCVDSVESAVNAERGGADR------------------IELCSGLSEGGTTPSMGVLQVVKQSV---QIPVFVMIR 97 (287)
T ss_dssp CSEEEEEESSHHHHHHHHHHTCSE------------------EEECBCGGGTCBCCCHHHHHHHHTTC---CSCEEEECC
T ss_pred CceEEEEeCCHHHHHHHHHhCCCE------------------EEECCCCCCCCCCCCHHHHHHHHHhc---CCCeEEEEe
Confidence 45555 578888888877543211 33333 233443 3789999998753 699999976
Q ss_pred CCCh-------------HHHHHHHHhcccccccC
Q 026239 116 ENVP-------------SRISRCLEEGAEEFFLK 136 (241)
Q Consensus 116 ~~~~-------------~~~~~~l~~Ga~~~l~K 136 (241)
.... ..+..+.++||++++.=
T Consensus 98 PRgGdF~Ys~~E~~~M~~dI~~~~~~GAdGvVfG 131 (287)
T 3iwp_A 98 PRGGDFLYSDREIEVMKADIRLAKLYGADGLVFG 131 (287)
T ss_dssp SSSSCSCCCHHHHHHHHHHHHHHHHTTCSEEEEC
T ss_pred cCCCCcccCHHHHHHHHHHHHHHHHcCCCEEEEe
Confidence 5544 57788899999998655
No 300
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=60.74 E-value=40 Score=28.50 Aligned_cols=38 Identities=11% Similarity=0.084 Sum_probs=31.2
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
+++++.+++..+ ++|||+-.+-.+.+.+.++++ ||+.+
T Consensus 185 ~~~i~~ik~~~~--~iPVianGgI~s~eda~~~l~-GaD~V 222 (350)
T 3b0p_A 185 HDWVHRLKGDFP--QLTFVTNGGIRSLEEALFHLK-RVDGV 222 (350)
T ss_dssp HHHHHHHHHHCT--TSEEEEESSCCSHHHHHHHHT-TSSEE
T ss_pred HHHHHHHHHhCC--CCeEEEECCcCCHHHHHHHHh-CCCEE
Confidence 788999988643 799998888788899999997 98764
No 301
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=60.48 E-value=43 Score=27.85 Aligned_cols=43 Identities=19% Similarity=0.396 Sum_probs=27.1
Q ss_pred CcEEEEccCC--ChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 108 IPVVIMSSEN--VPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 108 ipvIils~~~--~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
+-+|+++... ..+.+..++++|..=|+-||+ +.++..++....
T Consensus 65 ~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~e~~~l~~~a 111 (344)
T 3ezy_A 65 VDAVLVCSSTNTHSELVIACAKAKKHVFCEKPLSLNLADVDRMIEET 111 (344)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHH
T ss_pred CCEEEEcCCCcchHHHHHHHHhcCCeEEEECCCCCCHHHHHHHHHHH
Confidence 3444444332 345567888999888889995 556665555444
No 302
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=60.46 E-value=37 Score=26.98 Aligned_cols=18 Identities=22% Similarity=0.313 Sum_probs=11.7
Q ss_pred HHHHHHhhcCCCEEEEEC
Q 026239 29 KLIERLLKTSSYQVTTVD 46 (241)
Q Consensus 29 ~~l~~~L~~~g~~v~~~~ 46 (241)
..+...++..||.+..+.
T Consensus 30 ~gi~~~a~~~g~~~~~~~ 47 (288)
T 3gv0_A 30 FGITEVLSTTQYHLVVTP 47 (288)
T ss_dssp HHHHHHHTTSSCEEEECC
T ss_pred HHHHHHHHHcCCEEEEec
Confidence 345556677788877653
No 303
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=60.17 E-value=16 Score=29.53 Aligned_cols=58 Identities=14% Similarity=0.216 Sum_probs=37.4
Q ss_pred CHHHHHHHHHhcCCCCCCcEEE-EccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVI-MSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHL 150 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIi-ls~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l 150 (241)
-|..+++.||...+ +.|+.+ +--.+....+..+.++||+.+..-......+.+.+..+
T Consensus 72 ~G~~~v~~lr~~~p--~~~ldvHLmv~~p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~i 130 (246)
T 3inp_A 72 FGPMVLKALRDYGI--TAGMDVHLMVKPVDALIESFAKAGATSIVFHPEASEHIDRSLQLI 130 (246)
T ss_dssp CCHHHHHHHHHHTC--CSCEEEEEECSSCHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHH
T ss_pred cCHHHHHHHHHhCC--CCeEEEEEeeCCHHHHHHHHHHcCCCEEEEccccchhHHHHHHHH
Confidence 38899999998653 566665 33344456788888999987665544333444444443
No 304
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=60.09 E-value=29 Score=23.59 Aligned_cols=41 Identities=20% Similarity=0.208 Sum_probs=25.6
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHh
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFL 55 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l 55 (241)
..-|+|-|.|....+.+.+-....||+|.++.+.++.-..+
T Consensus 77 qvliiiydqdqnrleefsrevrrrgfevrtvtspddfkksl 117 (134)
T 2l69_A 77 QVLIIIYDQDQNRLEEFSREVRRRGFEVRTVTSPDDFKKSL 117 (134)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHTTCCEEEESSHHHHHHHH
T ss_pred eEEEEEEeCchhHHHHHHHHHHhcCceEEEecChHHHHHHH
Confidence 34455566666666666666666777777777666554433
No 305
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=60.08 E-value=55 Score=25.03 Aligned_cols=60 Identities=13% Similarity=0.089 Sum_probs=40.1
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCE--EE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQ--VT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP 88 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~--v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp 88 (241)
..+|..||-++......+..+...|.. |. ...+..+.+..+.... ....||+|++|....
T Consensus 83 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~--------------~~~~fD~V~~d~~~~ 145 (221)
T 3u81_A 83 GARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKY--------------DVDTLDMVFLDHWKD 145 (221)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTS--------------CCCCCSEEEECSCGG
T ss_pred CCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhc--------------CCCceEEEEEcCCcc
Confidence 578999999999998888888776642 54 4566666544332100 114589999997544
No 306
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=60.07 E-value=42 Score=27.25 Aligned_cols=68 Identities=18% Similarity=0.128 Sum_probs=40.2
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCC-----CEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSS-----YQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g-----~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
.+|..||-++...+..++.+...+ -.+. ...|+.+.+... ...||+||+|...|.
T Consensus 103 ~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-------------------~~~fD~Ii~d~~~~~ 163 (283)
T 2i7c_A 103 ENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-------------------TNTYDVIIVDSSDPI 163 (283)
T ss_dssp CEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-------------------CSCEEEEEEECCCTT
T ss_pred CEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC-------------------CCCceEEEEcCCCCC
Confidence 577888888777777777665321 1233 445555544322 235899999986553
Q ss_pred CC--H---HHHHHHHHhc
Q 026239 90 MT--G---YDLLKKIKES 102 (241)
Q Consensus 90 ~~--g---~~ll~~ir~~ 102 (241)
.. + .++++.++..
T Consensus 164 ~~~~~l~~~~~l~~~~~~ 181 (283)
T 2i7c_A 164 GPAETLFNQNFYEKIYNA 181 (283)
T ss_dssp TGGGGGSSHHHHHHHHHH
T ss_pred CcchhhhHHHHHHHHHHh
Confidence 22 1 3666766654
No 307
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=60.06 E-value=30 Score=28.95 Aligned_cols=65 Identities=14% Similarity=0.232 Sum_probs=43.0
Q ss_pred ccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 78 VNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 78 ~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
.|++|+-.. .+.-|..+++.+.. .+|||+....... +.+..|-.+|+..|-+.++|...+..++.
T Consensus 285 adv~v~ps~-~e~~~~~~~EAma~-----G~PvI~~~~~~~~----e~v~~~~~g~~~~~~d~~~la~~i~~l~~ 349 (394)
T 2jjm_A 285 SDLMLLLSE-KESFGLVLLEAMAC-----GVPCIGTRVGGIP----EVIQHGDTGYLCEVGDTTGVADQAIQLLK 349 (394)
T ss_dssp CSEEEECCS-CCSCCHHHHHHHHT-----TCCEEEECCTTST----TTCCBTTTEEEECTTCHHHHHHHHHHHHH
T ss_pred CCEEEeccc-cCCCchHHHHHHhc-----CCCEEEecCCChH----HHhhcCCceEEeCCCCHHHHHHHHHHHHc
Confidence 467776544 33446677777764 6788865433322 23445677899999999999877777664
No 308
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=59.40 E-value=63 Score=25.45 Aligned_cols=73 Identities=12% Similarity=0.099 Sum_probs=47.4
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCC--EEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSY--QVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
..+|..||-++......+..+...|+ .|. ...+..+.+..+..... ....||+||+|.... +
T Consensus 104 ~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~-------------~~~~fD~V~~d~~~~--~ 168 (247)
T 1sui_A 104 DGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEK-------------NHGSYDFIFVDADKD--N 168 (247)
T ss_dssp TCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGG-------------GTTCBSEEEECSCST--T
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccC-------------CCCCEEEEEEcCchH--H
Confidence 46899999999988888888887775 354 45677776654421100 023588999997533 3
Q ss_pred HHHHHHHHHhc
Q 026239 92 GYDLLKKIKES 102 (241)
Q Consensus 92 g~~ll~~ir~~ 102 (241)
-..+++.+...
T Consensus 169 ~~~~l~~~~~~ 179 (247)
T 1sui_A 169 YLNYHKRLIDL 179 (247)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 44556665543
No 309
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=59.38 E-value=16 Score=31.15 Aligned_cols=40 Identities=5% Similarity=-0.129 Sum_probs=34.2
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
+++++.+++.. .++|||...+-.+.+.+.+++.+||+.+.
T Consensus 265 ~~~i~~v~~~~--~~ipII~~GGI~s~~da~~~l~aGAd~V~ 304 (354)
T 4ef8_A 265 LANINAFYRRC--PGKLIFGCGGVYTGEDAFLHVLAGASMVQ 304 (354)
T ss_dssp HHHHHHHHHHC--TTSEEEEESCCCSHHHHHHHHHHTEEEEE
T ss_pred HHHHHHHHHhC--CCCCEEEECCcCCHHHHHHHHHcCCCEEE
Confidence 78888998863 37999999998899999999999998764
No 310
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=59.36 E-value=41 Score=29.25 Aligned_cols=99 Identities=11% Similarity=0.118 Sum_probs=60.6
Q ss_pred HHHHHHHhhcCCC--EEEEEC--CHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHHHhcC
Q 026239 28 RKLIERLLKTSSY--QVTTVD--SGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKIKESS 103 (241)
Q Consensus 28 ~~~l~~~L~~~g~--~v~~~~--~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~ir~~~ 103 (241)
...+..+.+..|. .|.... +.++..+++.... ...|++++-.. .+.-|+.+++.+..
T Consensus 321 ~~~l~~~~~~~~l~~~V~~~G~v~~~~~~~~~~~a~----------------~~~dv~v~pS~-~Eg~~~~~lEAma~-- 381 (499)
T 2r60_A 321 LGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLA----------------SKGSVFALTSF-YEPFGLAPVEAMAS-- 381 (499)
T ss_dssp HHHHHHHHHHTTCBTTEEEEECCSHHHHHHHHHHHH----------------HTTCEEEECCS-CBCCCSHHHHHHHT--
T ss_pred HHHHHHHHHhcCCCceEEECCCCCHHHHHHHHHhcC----------------cCCCEEEECcc-cCCCCcHHHHHHHc--
Confidence 5667777776654 254433 3466666664310 00157776433 23345667777764
Q ss_pred CCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 104 SLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 104 ~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
.+|||+... ....+.+..|..+|+..|.+.++|...+..++.
T Consensus 382 ---G~PvI~s~~----~g~~e~v~~~~~g~l~~~~d~~~la~~i~~ll~ 423 (499)
T 2r60_A 382 ---GLPAVVTRN----GGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE 423 (499)
T ss_dssp ---TCCEEEESS----BHHHHHTGGGTSSEEECTTCHHHHHHHHHHHHS
T ss_pred ---CCCEEEecC----CCHHHHhcCCceEEEeCCCCHHHHHHHHHHHHh
Confidence 678886532 234455667778999999999999877766653
No 311
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=59.07 E-value=26 Score=25.51 Aligned_cols=66 Identities=8% Similarity=-0.011 Sum_probs=36.9
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCE--EEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQ--VTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~--v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
..+|..+|-++......+..+...|+. +....+..+. +.. ....||+|+++..+..
T Consensus 49 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~---~~~----------------~~~~~D~i~~~~~~~~--- 106 (178)
T 3hm2_A 49 QTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRA---FDD----------------VPDNPDVIFIGGGLTA--- 106 (178)
T ss_dssp SEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGG---GGG----------------CCSCCSEEEECC-TTC---
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhh---hhc----------------cCCCCCEEEECCcccH---
Confidence 467777777777777777666655542 4333332221 110 1145889999887765
Q ss_pred HHHHHHHHhc
Q 026239 93 YDLLKKIKES 102 (241)
Q Consensus 93 ~~ll~~ir~~ 102 (241)
..+++.+...
T Consensus 107 ~~~l~~~~~~ 116 (178)
T 3hm2_A 107 PGVFAAAWKR 116 (178)
T ss_dssp TTHHHHHHHT
T ss_pred HHHHHHHHHh
Confidence 4455665543
No 312
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=58.98 E-value=38 Score=26.50 Aligned_cols=55 Identities=5% Similarity=-0.152 Sum_probs=38.3
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM 87 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m 87 (241)
.-+|.+||-++......++.....+..+. ...+..+.+..+ .+..||.|+.|...
T Consensus 83 ~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~------------------~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 83 IDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTL------------------PDGHFDGILYDTYP 138 (236)
T ss_dssp EEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGS------------------CTTCEEEEEECCCC
T ss_pred CcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccc------------------cccCCceEEEeeee
Confidence 35788999999998888888887777665 345555443222 23468999998654
No 313
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=58.86 E-value=42 Score=26.56 Aligned_cols=20 Identities=20% Similarity=0.195 Sum_probs=13.8
Q ss_pred HHHHHHHHhhcCCCEEEEEC
Q 026239 27 DRKLIERLLKTSSYQVTTVD 46 (241)
Q Consensus 27 ~~~~l~~~L~~~g~~v~~~~ 46 (241)
....+...++..||.+..+.
T Consensus 33 ~~~gi~~~a~~~g~~~~~~~ 52 (298)
T 3tb6_A 33 IIRGIESYLSEQGYSMLLTS 52 (298)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 44556667777898887654
No 314
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=58.82 E-value=25 Score=27.33 Aligned_cols=47 Identities=11% Similarity=0.157 Sum_probs=30.4
Q ss_pred cccccEEEEeCCC-----CCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHH
Q 026239 75 EVGVNLVITDYCM-----PGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISR 124 (241)
Q Consensus 75 ~~~~dlIilD~~m-----p~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~ 124 (241)
+..|||||+|--. .-.+--+++..|...+. ..- ||+|+...+..+.+
T Consensus 118 ~~~yDlvILDEi~~al~~g~l~~~ev~~~l~~Rp~--~~~-vIlTGr~ap~~l~e 169 (196)
T 1g5t_A 118 DPLLDMVVLDELTYMVAYDYLPLEEVISALNARPG--HQT-VIITGRGCHRDILD 169 (196)
T ss_dssp CTTCSEEEEETHHHHHHTTSSCHHHHHHHHHTSCT--TCE-EEEECSSCCHHHHH
T ss_pred cCCCCEEEEeCCCccccCCCCCHHHHHHHHHhCcC--CCE-EEEECCCCcHHHHH
Confidence 3568999999542 23456678899987653 444 45666666665544
No 315
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=58.67 E-value=46 Score=27.79 Aligned_cols=105 Identities=17% Similarity=0.236 Sum_probs=56.1
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
.+++|.||.--..-...+..+.+..+++++ .++...+..+.+... +.+-. -.+-
T Consensus 4 ~~~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~-------------------~g~~~------~~~~ 58 (354)
T 3db2_A 4 NPVGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKR-------------------YNCAG------DATM 58 (354)
T ss_dssp CCEEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHH-------------------HTCCC------CSSH
T ss_pred CcceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHH-------------------cCCCC------cCCH
Confidence 358999999877666555554444478876 444333333322110 01100 0122
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
-+++. . . ++-+|+++.. ...+.+..|+++|..=|+-||+ +.++..++....
T Consensus 59 ~~~l~---~-~---~~D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a 113 (354)
T 3db2_A 59 EALLA---R-E---DVEMVIITVPNDKHAEVIEQCARSGKHIYVEKPISVSLDHAQRIDQVI 113 (354)
T ss_dssp HHHHH---C-S---SCCEEEECSCTTSHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHH
T ss_pred HHHhc---C-C---CCCEEEEeCChHHHHHHHHHHHHcCCEEEEccCCCCCHHHHHHHHHHH
Confidence 22332 1 1 3334444332 3356677889999998999996 456665555443
No 316
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=58.65 E-value=53 Score=24.31 Aligned_cols=69 Identities=16% Similarity=0.077 Sum_probs=45.0
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCC-EEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC--C
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSY-QVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG--M 90 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~-~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~--~ 90 (241)
..+|..||-++......+..+...+. .+. ...+..+.+..+. ...||+|++|..... .
T Consensus 67 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~------------------~~~fD~i~~~~p~~~~~~ 128 (189)
T 3p9n_A 67 AASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGT------------------TSPVDLVLADPPYNVDSA 128 (189)
T ss_dssp CSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCC------------------SSCCSEEEECCCTTSCHH
T ss_pred CCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhcc------------------CCCccEEEECCCCCcchh
Confidence 45799999999988888888776664 344 4566666544331 235789999854333 2
Q ss_pred CHHHHHHHHHh
Q 026239 91 TGYDLLKKIKE 101 (241)
Q Consensus 91 ~g~~ll~~ir~ 101 (241)
+-..+++.+..
T Consensus 129 ~~~~~l~~~~~ 139 (189)
T 3p9n_A 129 DVDAILAALGT 139 (189)
T ss_dssp HHHHHHHHHHH
T ss_pred hHHHHHHHHHh
Confidence 24456777765
No 317
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=58.55 E-value=25 Score=37.25 Aligned_cols=40 Identities=15% Similarity=0.099 Sum_probs=33.4
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHH-----------Hhccccccc
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCL-----------EEGAEEFFL 135 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l-----------~~Ga~~~l~ 135 (241)
+.++..|++.. ++|||+-.+-.+...+..++ .+||+++..
T Consensus 744 l~lv~~i~~~~---~ipviaaGGI~~g~~i~aaltg~ws~~~g~palGAdgV~~ 794 (2060)
T 2uva_G 744 LLMYSRIRKCS---NIVLVAGSGFGGSEDTYPYLTGSWSTKFGYPPMPFDGCMF 794 (2060)
T ss_dssp HHHHHHHHTST---TEEEEEESSCCSHHHHHHHHHTCGGGTTTSCCCCCSCEEE
T ss_pred HHHHHHHHHHc---CCCEEEeCCCCCHHHHHHHhcCcchhhcCCCCCCCCEEEE
Confidence 56788888753 78999999999999999999 999998644
No 318
>3aon_B V-type sodium ATPase subunit G; V-ATPase, coiled-coil, alpha/beta fold, hydrol Na(+)-ATPase, NTPA3-NTPB3, NTPC, central AXIS; HET: MSE; 2.00A {Enterococcus hirae}
Probab=58.53 E-value=29 Score=24.50 Aligned_cols=75 Identities=8% Similarity=0.135 Sum_probs=47.5
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDL 95 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~l 95 (241)
++|.+|.| ..... -+.-.|.++..+.+.+++.+.+.... .+ ++.+|++.-.+-..-. +.
T Consensus 3 mKiaVIGD-~Dtv~----GFrLaGie~~~v~~~ee~~~~~~~l~--------------~~-digIIlIte~ia~~i~-~~ 61 (115)
T 3aon_B 3 YKIGVVGD-KDSVS----PFRLFGFDVQHGTTKTEIRKTIDEMA--------------KN-EYGVIYITEQCANLVP-ET 61 (115)
T ss_dssp EEEEEESC-HHHHG----GGGGGTCEEECCCSHHHHHHHHHHHH--------------HT-TEEEEEEEHHHHTTCH-HH
T ss_pred eEEEEEEC-HHHHH----HHHHcCCeEEEeCCHHHHHHHHHHHH--------------hc-CceEEEEeHHHHHHhH-HH
Confidence 68899998 33322 34456888888888888777665421 22 5889999876655444 35
Q ss_pred HHHHHhcCCCCCCcEEEEcc
Q 026239 96 LKKIKESSSLRDIPVVIMSS 115 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~ 115 (241)
++.+++. ..|+|+.-+
T Consensus 62 i~~~~~~----~~P~IveIP 77 (115)
T 3aon_B 62 IERYKGQ----LTPAIILIP 77 (115)
T ss_dssp HHHHHTS----SSCEEEEEC
T ss_pred HHHHhCC----CCCEEEEEC
Confidence 5556632 467776643
No 319
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=58.46 E-value=50 Score=27.01 Aligned_cols=62 Identities=8% Similarity=0.156 Sum_probs=39.1
Q ss_pred ccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCCh--H--HHHHHHHhcccccccCCCC--HHHHHHhhHHH
Q 026239 78 VNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVP--S--RISRCLEEGAEEFFLKPVR--LSDLNKLKPHL 150 (241)
Q Consensus 78 ~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~--~--~~~~~l~~Ga~~~l~KP~~--~~~L~~~~~~l 150 (241)
.|++|+-. + |..+++.+.. .+|||+......+ . ......+.|. +++..|-+ .++|...+..+
T Consensus 255 ad~~v~~s---g--~~~~~EAma~-----G~Pvi~~~~~g~~~~q~~~~~~~~~~g~-g~~~~~~d~~~~~la~~i~~l 322 (364)
T 1f0k_A 255 ADVVVCRS---G--ALTVSEIAAA-----GLPALFVPFQHKDRQQYWNALPLEKAGA-AKIIEQPQLSVDAVANTLAGW 322 (364)
T ss_dssp CSEEEECC---C--HHHHHHHHHH-----TCCEEECCCCCTTCHHHHHHHHHHHTTS-EEECCGGGCCHHHHHHHHHTC
T ss_pred CCEEEECC---c--hHHHHHHHHh-----CCCEEEeeCCCCchhHHHHHHHHHhCCc-EEEeccccCCHHHHHHHHHhc
Confidence 35777642 2 7778887775 6789876433211 1 1234456777 89998865 88887766555
No 320
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=58.33 E-value=7.8 Score=30.17 Aligned_cols=57 Identities=19% Similarity=0.289 Sum_probs=34.9
Q ss_pred ccEEEEeCCCCCCCH-------HHHHHHHHhcCC--CCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 78 VNLVITDYCMPGMTG-------YDLLKKIKESSS--LRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 78 ~dlIilD~~mp~~~g-------~~ll~~ir~~~~--~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.|.|+++...|+.+| ++.++.+++... ..++||++..+ -..+.+..++++|++.++.
T Consensus 132 ~d~vl~~~~~~g~~g~~~~~~~~~~i~~~~~~~~~~~~~~~i~v~GG-I~~~~~~~~~~~Gad~vvv 197 (220)
T 2fli_A 132 VDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGG-VDNKTIRACYEAGANVFVA 197 (220)
T ss_dssp CSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESS-CCTTTHHHHHHHTCCEEEE
T ss_pred CCEEEEEEECCCCcccccCHHHHHHHHHHHHHHHhcCCCceEEEECc-CCHHHHHHHHHcCCCEEEE
Confidence 678888776665544 244555554220 01567665544 4467777888999988743
No 321
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=58.33 E-value=21 Score=28.46 Aligned_cols=55 Identities=13% Similarity=0.160 Sum_probs=42.6
Q ss_pred ccEEEEeCCCCCCC-HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 78 VNLVITDYCMPGMT-GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 78 ~dlIilD~~mp~~~-g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
+++|-+|. .+.. ..++++++++... ++|+++=.+-.+++.+.+++ .||+..+.-.
T Consensus 154 ~~~VYld~--sG~~~~~~~i~~i~~~~~--~~Pv~vGGGI~t~e~a~~~~-~gAD~VVVGS 209 (228)
T 3vzx_A 154 LPIFYLEY--SGVLGDIEAVKKTKAVLE--TSTLFYGGGIKDAETAKQYA-EHADVIVVGN 209 (228)
T ss_dssp CSEEEEEC--TTSCCCHHHHHHHHHHCS--SSEEEEESSCCSHHHHHHHH-TTCSEEEECT
T ss_pred CCEEEecC--CCCcCCHHHHHHHHHhcC--CCCEEEeCCCCCHHHHHHHH-hCCCEEEECh
Confidence 46899998 3433 5899999998642 58998877778888888877 7999987765
No 322
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=58.32 E-value=76 Score=25.99 Aligned_cols=42 Identities=19% Similarity=0.241 Sum_probs=26.6
Q ss_pred CcEEEEccCC--ChHHHHHHHHhcccccccCCC--CHHHHHHhhHH
Q 026239 108 IPVVIMSSEN--VPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPH 149 (241)
Q Consensus 108 ipvIils~~~--~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~ 149 (241)
+-+|+++... ..+.+..|+++|.+=|+-||+ +.++..++...
T Consensus 63 ~D~V~i~tp~~~h~~~~~~al~~gk~V~~EKP~~~~~~~~~~l~~~ 108 (325)
T 2ho3_A 63 FDLVYIASPNSLHFAQAKAALSAGKHVILEKPAVSQPQEWFDLIQT 108 (325)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHH
T ss_pred CCEEEEeCChHHHHHHHHHHHHcCCcEEEecCCcCCHHHHHHHHHH
Confidence 4445444432 346677888999888889996 45555554443
No 323
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=58.26 E-value=43 Score=26.17 Aligned_cols=72 Identities=11% Similarity=0.079 Sum_probs=47.2
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCC--EEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSY--QVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
..+|..||-++......+..++..|+ .+. ...+..+.+..+..... ....||+||+|...+ +
T Consensus 95 ~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~-------------~~~~fD~I~~d~~~~--~ 159 (237)
T 3c3y_A 95 DGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQE-------------SEGSYDFGFVDADKP--N 159 (237)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTT-------------CTTCEEEEEECSCGG--G
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccC-------------CCCCcCEEEECCchH--H
Confidence 47899999999999999988887776 354 55677776654421100 023589999996432 3
Q ss_pred HHHHHHHHHh
Q 026239 92 GYDLLKKIKE 101 (241)
Q Consensus 92 g~~ll~~ir~ 101 (241)
-..+++.+..
T Consensus 160 ~~~~l~~~~~ 169 (237)
T 3c3y_A 160 YIKYHERLMK 169 (237)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3455555544
No 324
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=58.19 E-value=43 Score=27.22 Aligned_cols=91 Identities=19% Similarity=0.251 Sum_probs=59.1
Q ss_pred eCCHHHHHHHHHHhhc-CCCEEEE------ECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-CCCHH
Q 026239 22 DDSIIDRKLIERLLKT-SSYQVTT------VDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-GMTGY 93 (241)
Q Consensus 22 dd~~~~~~~l~~~L~~-~g~~v~~------~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-~~~g~ 93 (241)
.|..++...++++++. .|..|+. +.+..+|++.|... .++=|++.=.-+ -.+|+
T Consensus 97 ~dg~iD~~~~~~Li~~a~~~~vTFHRAfD~~~d~~~ale~L~~l------------------G~~rILTSG~~~~a~~g~ 158 (256)
T 1twd_A 97 VDGNVDMPRMEKIMAAAGPLAVTFHRAFDMCANPLYTLNNLAEL------------------GIARVLTSGQKSDALQGL 158 (256)
T ss_dssp TTSSBCHHHHHHHHHHHTTSEEEECGGGGGCSCHHHHHHHHHHH------------------TCCEEEECTTSSSTTTTH
T ss_pred CCCCcCHHHHHHHHHHhCCCcEEEECchhccCCHHHHHHHHHHc------------------CCCEEECCCCCCCHHHHH
Confidence 3555677777777754 3677765 56888999988543 355788764443 36899
Q ss_pred HHHHHHHhcCCCCCCcEEEEc-cCCChHHHHHHHHhcccccc
Q 026239 94 DLLKKIKESSSLRDIPVVIMS-SENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils-~~~~~~~~~~~l~~Ga~~~l 134 (241)
++|+.+.+.. . .|.||. +.-..+.+...+..|+..|-
T Consensus 159 ~~L~~Lv~~a---~-~i~Im~GgGv~~~Ni~~l~~tGv~e~H 196 (256)
T 1twd_A 159 SKIMELIAHR---D-APIIMAGAGVRAENLHHFLDAGVLEVH 196 (256)
T ss_dssp HHHHHHHTSS---S-CCEEEEESSCCTTTHHHHHHHTCSEEE
T ss_pred HHHHHHHHhh---C-CcEEEecCCcCHHHHHHHHHcCCCeEe
Confidence 9999998753 2 344443 33344555555577887775
No 325
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=58.18 E-value=31 Score=28.20 Aligned_cols=54 Identities=24% Similarity=0.295 Sum_probs=38.5
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc--CCCCHHHHHHhhHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL--KPVRLSDLNKLKPH 149 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~--KP~~~~~L~~~~~~ 149 (241)
++.++.++... ++||+.--.--++..+..+...||+.+++ .-++.+++..++..
T Consensus 102 ~~~l~~ir~~v---~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~ 157 (272)
T 3qja_A 102 LDDLDAVRASV---SIPVLRKDFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDR 157 (272)
T ss_dssp HHHHHHHHHHC---SSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHH
T ss_pred HHHHHHHHHhC---CCCEEECccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHH
Confidence 78899998763 78998665444555589999999999876 44555666554443
No 326
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=58.14 E-value=24 Score=31.58 Aligned_cols=56 Identities=9% Similarity=0.185 Sum_probs=41.9
Q ss_pred cccEEEEeCCCCCCC-HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 77 GVNLVITDYCMPGMT-GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 77 ~~dlIilD~~mp~~~-g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.+|+|.+|...+... -+++++++++..+ ++||++ ..-...+.+..+.++||+.+..
T Consensus 243 G~d~I~id~a~g~~~~~~~~i~~ir~~~p--~~~Vi~-g~v~t~e~a~~l~~aGaD~I~V 299 (496)
T 4fxs_A 243 GVDVLLIDSSHGHSEGVLQRIRETRAAYP--HLEIIG-GNVATAEGARALIEAGVSAVKV 299 (496)
T ss_dssp TCSEEEEECSCTTSHHHHHHHHHHHHHCT--TCCEEE-EEECSHHHHHHHHHHTCSEEEE
T ss_pred cCceEEeccccccchHHHHHHHHHHHHCC--CceEEE-cccCcHHHHHHHHHhCCCEEEE
Confidence 467999998876543 4688999998753 788876 3334567788899999988764
No 327
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=58.13 E-value=8.5 Score=29.27 Aligned_cols=88 Identities=16% Similarity=0.128 Sum_probs=51.4
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCCCEE-EEECCHH---HHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSSYQV-TTVDSGS---KALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM 87 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v-~~~~~~~---~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m 87 (241)
.....+|+++.|+....-.+...|... +.+ ...-+|. +.+..+.... ....+|+||+-+..
T Consensus 31 ~~~~~~i~~~GDSit~g~~~~~~l~~~-~~v~n~g~~G~~~~~~~~~l~~~~--------------~~~~pd~vvi~~G~ 95 (214)
T 2hsj_A 31 SVVEPNILFIGDSIVEYYPLQELFGTS-KTIVNRGIRGYQTGLLLENLDAHL--------------YGGAVDKIFLLIGT 95 (214)
T ss_dssp CSSCCSEEEEESHHHHTCCHHHHHCSS-SCEEEEECTTCCHHHHHHTGGGGC--------------CCSCCCEEEEECCH
T ss_pred ccccCCEEEEecchhcCCCHHHHcCCc-ceEEecCccchhHHHHHHHhhHHH--------------HhcCCCEEEEEEec
Confidence 345789999999987766667777543 344 3344443 3333332211 23357899986543
Q ss_pred CCC----C-------HHHHHHHHHhcCCCCCCcEEEEccC
Q 026239 88 PGM----T-------GYDLLKKIKESSSLRDIPVVIMSSE 116 (241)
Q Consensus 88 p~~----~-------g~~ll~~ir~~~~~~~ipvIils~~ 116 (241)
.+. + --.+++.+++..+ ..+||+++..
T Consensus 96 ND~~~~~~~~~~~~~l~~~i~~l~~~~p--~~~iil~~~~ 133 (214)
T 2hsj_A 96 NDIGKDVPVNEALNNLEAIIQSVARDYP--LTEIKLLSIL 133 (214)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHHHHCT--TCEEEEECCC
T ss_pred CcCCcCCCHHHHHHHHHHHHHHHHHhCC--CCeEEEEecC
Confidence 221 1 1235677777653 6788888754
No 328
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=58.09 E-value=61 Score=28.13 Aligned_cols=115 Identities=9% Similarity=0.021 Sum_probs=59.5
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccc-cEEEEeCCCCCC
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGV-NLVITDYCMPGM 90 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~-dlIilD~~mp~~ 90 (241)
..+++|.||.-...-...+..+....+++++ +++...+..+.+.... ....+ +.-+.+. ...
T Consensus 18 ~~~~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~~~~a~~~--------------~~~g~~~~~~~~~--~~~ 81 (444)
T 2ixa_A 18 PKKVRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMVGRAQEIL--------------KKNGKKPAKVFGN--GND 81 (444)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHHHHHHHHH--------------HHTTCCCCEEECS--STT
T ss_pred CCCceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHH--------------HhcCCCCCceecc--CCC
Confidence 3468999999876666666555554578776 4543333333321100 00000 0112210 111
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
+ ++.+-.. .++-+|+++.. ...+.+..|+++|.+=|+-||+ +.++..+++...
T Consensus 82 ~----~~~ll~~---~~vD~V~i~tp~~~h~~~~~~al~aGkhV~~EKP~a~~~~ea~~l~~~a 138 (444)
T 2ixa_A 82 D----YKNMLKD---KNIDAVFVSSPWEWHHEHGVAAMKAGKIVGMEVSGAITLEECWDYVKVS 138 (444)
T ss_dssp T----HHHHTTC---TTCCEEEECCCGGGHHHHHHHHHHTTCEEEECCCCCSSHHHHHHHHHHH
T ss_pred C----HHHHhcC---CCCCEEEEcCCcHHHHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHH
Confidence 2 1222221 14445555443 3356777899999998999996 466665555544
No 329
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=57.74 E-value=35 Score=27.81 Aligned_cols=85 Identities=7% Similarity=-0.072 Sum_probs=50.0
Q ss_pred ceEEEEe-CCHH---HHHHHHHHhhcCCCEEE---EE----CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEe
Q 026239 16 FHVLAVD-DSII---DRKLIERLLKTSSYQVT---TV----DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITD 84 (241)
Q Consensus 16 ~~ILiVd-d~~~---~~~~l~~~L~~~g~~v~---~~----~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD 84 (241)
-+|.+|. |+.. ....++..|+..|..+. .+ .+....+..+.... +|+||+.
T Consensus 136 ~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~~------------------~dav~~~ 197 (362)
T 3snr_A 136 KTVGYIGYSDSYGDLWFNDLKKQGEAMGLKIVGEERFARPDTSVAGQALKLVAAN------------------PDAILVG 197 (362)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECTTCSCCHHHHHHHHHHC------------------CSEEEEE
T ss_pred CEEEEEecCchHHHHHHHHHHHHHHHcCCEEEEEeecCCCCCCHHHHHHHHHhcC------------------CCEEEEe
Confidence 4555553 4432 33456667777887654 22 23445566554433 4588874
Q ss_pred CCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHH
Q 026239 85 YCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRI 122 (241)
Q Consensus 85 ~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~ 122 (241)
. .+.....+++.+++.+. .+|++...+..+....
T Consensus 198 ~--~~~~a~~~~~~~~~~g~--~~p~i~~~g~~~~~~~ 231 (362)
T 3snr_A 198 A--SGTAAALPQTTLRERGY--NGLIYQTHGAASMDFI 231 (362)
T ss_dssp C--CHHHHHHHHHHHHHTTC--CSEEEECGGGCSHHHH
T ss_pred c--CcchHHHHHHHHHHcCC--CccEEeccCcCcHHHH
Confidence 3 24456778888888765 6788666665555443
No 330
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=57.71 E-value=66 Score=26.37 Aligned_cols=86 Identities=9% Similarity=-0.035 Sum_probs=49.8
Q ss_pred cceEEEE-e-CCHHH---HHHHHHHhhcCCCEEEE--E----CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEE
Q 026239 15 QFHVLAV-D-DSIID---RKLIERLLKTSSYQVTT--V----DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVIT 83 (241)
Q Consensus 15 ~~~ILiV-d-d~~~~---~~~l~~~L~~~g~~v~~--~----~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIil 83 (241)
.-+|.+| + ++... ...+...++..|..+.. + .+....+..+.... +|+||+
T Consensus 149 ~~~iaii~~~~~~~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~d~~~~~~~l~~~~------------------~d~v~~ 210 (366)
T 3td9_A 149 AKRVVVFTDVEQDYSVGLSNFFINKFTELGGQVKRVFFRSGDQDFSAQLSVAMSFN------------------PDAIYI 210 (366)
T ss_dssp CCEEEEEEETTCHHHHHHHHHHHHHHHHTTCEEEEEEECTTCCCCHHHHHHHHHTC------------------CSEEEE
T ss_pred CcEEEEEEeCCCcHHHHHHHHHHHHHHHCCCEEEEEEeCCCCccHHHHHHHHHhcC------------------CCEEEE
Confidence 3567777 3 44332 34566677777876652 2 24455666664433 458888
Q ss_pred eCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHH
Q 026239 84 DYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRI 122 (241)
Q Consensus 84 D~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~ 122 (241)
.. .+.+...+++.+++... .+|++...+.......
T Consensus 211 ~~--~~~~a~~~~~~~~~~g~--~~~~~~~~~~~~~~~~ 245 (366)
T 3td9_A 211 TG--YYPEIALISRQARQLGF--TGYILAGDGADAPELI 245 (366)
T ss_dssp CS--CHHHHHHHHHHHHHTTC--CSEEEECGGGCSTHHH
T ss_pred cc--chhHHHHHHHHHHHcCC--CceEEeeCCcCCHHHH
Confidence 43 23456678888888764 6777655444444433
No 331
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=57.54 E-value=27 Score=28.92 Aligned_cols=91 Identities=32% Similarity=0.396 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHhhcC-CCEEEE------ECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC-CCHHH
Q 026239 23 DSIIDRKLIERLLKTS-SYQVTT------VDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG-MTGYD 94 (241)
Q Consensus 23 d~~~~~~~l~~~L~~~-g~~v~~------~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~-~~g~~ 94 (241)
|...+...++.+++.. ++.|+. +.+..+|++.+... .+|-||+.=.-+. .+|++
T Consensus 136 dg~iD~~~~~~Li~~a~~l~vTFHRAFD~~~d~~~Ale~Li~l------------------GvdrILTSG~~~~a~~Gl~ 197 (287)
T 3iwp_A 136 DGHIDKELCMSLMAICRPLPVTFHRAFDMVHDPMAALETLLTL------------------GFERVLTSGCDSSALEGLP 197 (287)
T ss_dssp TSCBCHHHHHHHHHHHTTSCEEECGGGGGCSCHHHHHHHHHHH------------------TCSEEEECTTSSSTTTTHH
T ss_pred CCCcCHHHHHHHHHHcCCCcEEEECchhccCCHHHHHHHHHHc------------------CCCEEECCCCCCChHHhHH
Confidence 4456666666766543 345553 23678888888543 4668888655443 68999
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHHHHHHHH-hccccc
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSRISRCLE-EGAEEF 133 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~-~Ga~~~ 133 (241)
.++.+.+... ..++|++-. .-..+.+...++ .|++.|
T Consensus 198 ~Lk~Lv~~a~-~rI~ImaGG-GV~~~Ni~~l~~~tG~~~~ 235 (287)
T 3iwp_A 198 LIKRLIEQAK-GRIVVMPGG-GITDRNLQRILEGSGATEF 235 (287)
T ss_dssp HHHHHHHHHT-TSSEEEECT-TCCTTTHHHHHHHHCCSEE
T ss_pred HHHHHHHHhC-CCCEEEECC-CcCHHHHHHHHHhhCCCEE
Confidence 9999876532 245554433 344555555555 788776
No 332
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=57.37 E-value=46 Score=27.50 Aligned_cols=41 Identities=15% Similarity=0.236 Sum_probs=27.3
Q ss_pred CCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 107 DIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 107 ~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
.+|||+........ +.++.| .+++..| +.++|...+..++.
T Consensus 301 G~PvI~~~~~~~~~---e~v~~g-~g~lv~~-d~~~la~~i~~ll~ 341 (384)
T 1vgv_A 301 GKPVLVMRDTTERP---EAVTAG-TVRLVGT-DKQRIVEEVTRLLK 341 (384)
T ss_dssp TCCEEEESSCCSCH---HHHHHT-SEEEECS-SHHHHHHHHHHHHH
T ss_pred CCCEEEccCCCCcc---hhhhCC-ceEEeCC-CHHHHHHHHHHHHh
Confidence 68998764312222 234667 7888877 88888877776664
No 333
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=57.15 E-value=79 Score=25.83 Aligned_cols=85 Identities=12% Similarity=0.065 Sum_probs=49.3
Q ss_pred ceEEEE-eCCHHH---HHHHHHHhhcCCCEEEE---E----CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEe
Q 026239 16 FHVLAV-DDSIID---RKLIERLLKTSSYQVTT---V----DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITD 84 (241)
Q Consensus 16 ~~ILiV-dd~~~~---~~~l~~~L~~~g~~v~~---~----~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD 84 (241)
-+|.+| +|+... ...+...|+..|..+.. + .+....+..+.... +|+||+.
T Consensus 140 ~~ia~i~~~~~~g~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~------------------~d~v~~~ 201 (368)
T 4eyg_A 140 KKVATLTSDYAPGNDALAFFKERFTAGGGEIVEEIKVPLANPDFAPFLQRMKDAK------------------PDAMFVF 201 (368)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECSSSCCCHHHHHHHHHHC------------------CSEEEEE
T ss_pred CEEEEEecCchHhHHHHHHHHHHHHHcCCEEEEEEeCCCCCCcHHHHHHHHHhcC------------------CCEEEEe
Confidence 455444 444433 35566677777876542 2 24556666665433 4589885
Q ss_pred CCCCCCCHHHHHHHHHhcCCCCC-CcEEEEccCCChH
Q 026239 85 YCMPGMTGYDLLKKIKESSSLRD-IPVVIMSSENVPS 120 (241)
Q Consensus 85 ~~mp~~~g~~ll~~ir~~~~~~~-ipvIils~~~~~~ 120 (241)
. .+.+...+++.+++...... +|++......+..
T Consensus 202 ~--~~~~a~~~~~~~~~~g~~~~~v~~~~~~~~~~~~ 236 (368)
T 4eyg_A 202 V--PAGQGGNFMKQFAERGLDKSGIKVIGPGDVMDDD 236 (368)
T ss_dssp C--CTTCHHHHHHHHHHTTGGGTTCEEEEETTTTCHH
T ss_pred c--cchHHHHHHHHHHHcCCCcCCceEEecCcccCHH
Confidence 4 34488899999998654222 6666554333443
No 334
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=57.11 E-value=34 Score=25.50 Aligned_cols=39 Identities=21% Similarity=0.304 Sum_probs=25.1
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCC--hHHHHH-HHHhccccc
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENV--PSRISR-CLEEGAEEF 133 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~--~~~~~~-~l~~Ga~~~ 133 (241)
+-.++++.|++. .+++.++|+... ...+.. .-..|..+|
T Consensus 38 g~~~~L~~L~~~----g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~ 79 (189)
T 3ib6_A 38 NAKETLEKVKQL----GFKQAILSNTATSDTEVIKRVLTNFGIIDY 79 (189)
T ss_dssp THHHHHHHHHHT----TCEEEEEECCSSCCHHHHHHHHHHTTCGGG
T ss_pred CHHHHHHHHHHC----CCEEEEEECCCccchHHHHHHHHhcCchhh
Confidence 346899999975 578999997654 133333 335666544
No 335
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=56.95 E-value=81 Score=25.93 Aligned_cols=59 Identities=17% Similarity=0.190 Sum_probs=34.0
Q ss_pred ccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 78 VNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 78 ~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
.|++|+.- .|+ +++.+.. .+|+|+.........+ .+.| .+++.. .+.++|...+..++.
T Consensus 275 ad~~v~~S-----~g~-~lEA~a~-----G~PvI~~~~~~~~~~~---~~~g-~g~lv~-~d~~~la~~i~~ll~ 333 (376)
T 1v4v_A 275 SLLLVTDS-----GGL-QEEGAAL-----GVPVVVLRNVTERPEG---LKAG-ILKLAG-TDPEGVYRVVKGLLE 333 (376)
T ss_dssp EEEEEESC-----HHH-HHHHHHT-----TCCEEECSSSCSCHHH---HHHT-SEEECC-SCHHHHHHHHHHHHT
T ss_pred CcEEEECC-----cCH-HHHHHHc-----CCCEEeccCCCcchhh---hcCC-ceEECC-CCHHHHHHHHHHHHh
Confidence 45777642 344 4455442 7899976433332222 4556 466663 488888777766664
No 336
>4hjf_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, EAL domain, signaling protein; HET: MSE C2E; 1.75A {Caulobacter crescentus}
Probab=56.84 E-value=3.7 Score=34.85 Aligned_cols=73 Identities=7% Similarity=0.039 Sum_probs=44.0
Q ss_pred ccccccEEEEeCCCC-----CCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccc----cccCCCCHHHHH
Q 026239 74 QEVGVNLVITDYCMP-----GMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEE----FFLKPVRLSDLN 144 (241)
Q Consensus 74 ~~~~~dlIilD~~mp-----~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~----~l~KP~~~~~L~ 144 (241)
...++|.|=+|-.+- +.....+++.|-.....-++.|| .-+-.+.+....+.+.|++. |+.||+..+++.
T Consensus 244 ~~lp~d~iKID~sfv~~~~~~~~~~~iv~~ii~la~~lg~~vv-AEGVEt~~q~~~L~~lG~d~~QGy~~~~P~~~~~~~ 322 (340)
T 4hjf_A 244 TRLPFDTLKIDRYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVV-AEGVENAEMAHALQSLGCDYGQGFGYAPALSPQEAE 322 (340)
T ss_dssp GGSCCSEEEECHHHHHHTTTCHHHHHHHHHHHHHHHHHTCEEE-EECCCSHHHHHHHHHTTCCEEESTTTCCSBCHHHHH
T ss_pred HhCCCChhcccHHhhhcccCCHhHHHHHHHHHHHHHHcCCEEE-EEeCCcHHHHHHHHHcCCCEeecCccccCCCHHHHH
Confidence 455677888885432 12234455554322111145555 44555677777788999873 478999999986
Q ss_pred Hhh
Q 026239 145 KLK 147 (241)
Q Consensus 145 ~~~ 147 (241)
..+
T Consensus 323 ~~l 325 (340)
T 4hjf_A 323 VYL 325 (340)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 337
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=56.61 E-value=93 Score=26.52 Aligned_cols=56 Identities=9% Similarity=0.156 Sum_probs=37.9
Q ss_pred cccEEEEeCCCCCC-CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 77 GVNLVITDYCMPGM-TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 77 ~~dlIilD~~mp~~-~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.+|+|.+|...... .-++.++++++..+ ++|||+-+ -.+.+.+..+.++|||.+..
T Consensus 120 Gvd~I~idta~G~~~~~~~~I~~ik~~~p--~v~Vi~G~-v~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 120 GVDVLLIDSSHGHSEGVLQRIRETRAAYP--HLEIIGGN-VATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp TCSEEEEECSCTTSHHHHHHHHHHHHHCT--TCEEEEEE-ECSHHHHHHHHHHTCSEEEE
T ss_pred CCCEEEEeCCCCCCHHHHHHHHHHHHhcC--CCceEeee-eCCHHHHHHHHHcCCCEEEE
Confidence 45699998643222 23577888887653 77776522 24567788899999987765
No 338
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=56.56 E-value=28 Score=28.78 Aligned_cols=65 Identities=11% Similarity=0.063 Sum_probs=42.7
Q ss_pred EEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHH
Q 026239 43 TTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRI 122 (241)
Q Consensus 43 ~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~ 122 (241)
+.+++.+++.+.+.. .+|+|.+|-.-| -++-+.++.... + ..|..|+.-+.+.+
T Consensus 203 VEv~tl~ea~eAl~a-------------------GaD~I~LDn~~~----~~l~~av~~~~~--~-v~ieaSGGIt~~~i 256 (287)
T 3tqv_A 203 VEVTNLDELNQAIAA-------------------KADIVMLDNFSG----EDIDIAVSIARG--K-VALEVSGNIDRNSI 256 (287)
T ss_dssp EEESSHHHHHHHHHT-------------------TCSEEEEESCCH----HHHHHHHHHHTT--T-CEEEEESSCCTTTH
T ss_pred EEeCCHHHHHHHHHc-------------------CCCEEEEcCCCH----HHHHHHHHhhcC--C-ceEEEECCCCHHHH
Confidence 378999999988853 356999996322 232222222211 3 35567787888888
Q ss_pred HHHHHhccccc
Q 026239 123 SRCLEEGAEEF 133 (241)
Q Consensus 123 ~~~l~~Ga~~~ 133 (241)
....+.|+|.+
T Consensus 257 ~~~a~tGVD~I 267 (287)
T 3tqv_A 257 VAIAKTGVDFI 267 (287)
T ss_dssp HHHHTTTCSEE
T ss_pred HHHHHcCCCEE
Confidence 88889998755
No 339
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=56.15 E-value=45 Score=27.82 Aligned_cols=103 Identities=17% Similarity=0.244 Sum_probs=55.9
Q ss_pred CcceEEEEeCCHHHHHHHHHHhh-cCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLK-TSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~-~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
.+++|.||.--..-+......|. ..+++++ +++...+..+ ...+. + -+..|
T Consensus 6 ~~~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~---~~~~~----------------~-~~~~~------- 58 (352)
T 3kux_A 6 DKIKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVH---ADWPA----------------I-PVVSD------- 58 (352)
T ss_dssp CCEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHH---TTCSS----------------C-CEESC-------
T ss_pred CCceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHH---hhCCC----------------C-ceECC-------
Confidence 46899999987766653344444 4477776 4443333222 11111 0 11212
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
--+++ .. . ++-+|+++.. ...+.+..|+++|.+=|+-||+ +.++..+++...
T Consensus 59 ~~~ll---~~-~---~vD~V~i~tp~~~H~~~~~~al~aGkhV~~EKPla~~~~e~~~l~~~a 114 (352)
T 3kux_A 59 PQMLF---ND-P---SIDLIVIPTPNDTHFPLAQSALAAGKHVVVDKPFTVTLSQANALKEHA 114 (352)
T ss_dssp HHHHH---HC-S---SCCEEEECSCTTTHHHHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHH
T ss_pred HHHHh---cC-C---CCCEEEEeCChHHHHHHHHHHHHCCCcEEEECCCcCCHHHHHHHHHHH
Confidence 12232 22 1 3444444433 3456678899999999999995 566665555433
No 340
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=56.07 E-value=42 Score=27.48 Aligned_cols=21 Identities=24% Similarity=0.251 Sum_probs=14.9
Q ss_pred HHHHHHHHHhhcCCCEEEEEC
Q 026239 26 IDRKLIERLLKTSSYQVTTVD 46 (241)
Q Consensus 26 ~~~~~l~~~L~~~g~~v~~~~ 46 (241)
.+...+...+...||.+..+.
T Consensus 79 ~~~~gi~~~a~~~g~~~~~~~ 99 (339)
T 3h5o_A 79 ETLTGIETVLDAAGYQMLIGN 99 (339)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEe
Confidence 345567777788899887654
No 341
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=55.95 E-value=60 Score=29.10 Aligned_cols=92 Identities=16% Similarity=0.134 Sum_probs=56.8
Q ss_pred HHHHHHHhhcCCCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-----CCCHHHHHHHHH
Q 026239 28 RKLIERLLKTSSYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-----GMTGYDLLKKIK 100 (241)
Q Consensus 28 ~~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-----~~~g~~ll~~ir 100 (241)
.+.++.+-+..+.-|. .+.+.++|..+.. ..+|.|++.-+-. +...++++..++
T Consensus 332 ~~~i~~lr~~~~~PvivKgv~~~e~A~~a~~-------------------aGad~I~vs~hgG~~~d~~~~~~~~l~~v~ 392 (511)
T 1kbi_A 332 WKDIEELKKKTKLPIVIKGVQRTEDVIKAAE-------------------IGVSGVVLSNHGGRQLDFSRAPIEVLAETM 392 (511)
T ss_dssp HHHHHHHHHHCSSCEEEEEECSHHHHHHHHH-------------------TTCSEEEECCTTTTSSTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCcEEEEeCCCHHHHHHHHH-------------------cCCCEEEEcCCCCccCCCCCchHHHHHHHH
Confidence 3445554444454333 4667777766543 2355777743211 123466776665
Q ss_pred hcC----CCCCCcEEEEccCCChHHHHHHHHhcccccc-cCCC
Q 026239 101 ESS----SLRDIPVVIMSSENVPSRISRCLEEGAEEFF-LKPV 138 (241)
Q Consensus 101 ~~~----~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l-~KP~ 138 (241)
... ...++|||+-.+-.....+.+++.+||+.+. -.|+
T Consensus 393 ~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr~~ 435 (511)
T 1kbi_A 393 PILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGRPF 435 (511)
T ss_dssp HHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred HHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 432 1137999999998899999999999999874 3454
No 342
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=55.87 E-value=6.7 Score=31.79 Aligned_cols=58 Identities=26% Similarity=0.315 Sum_probs=35.0
Q ss_pred cccEEEEeCCCCCCCH-------HHHHHHHHhcCC--CCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 77 GVNLVITDYCMPGMTG-------YDLLKKIKESSS--LRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 77 ~~dlIilD~~mp~~~g-------~~ll~~ir~~~~--~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.+|+|++=..-||..| ++-++++|+... ..+++|. +.+.-+.+.+..+.++||+.|+.
T Consensus 156 ~vD~VlvMsV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~-VDGGI~~~ti~~~~~aGAD~~V~ 222 (246)
T 3inp_A 156 NIDRVLIMSVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLE-IDGGVNPYNIAEIAVCGVNAFVA 222 (246)
T ss_dssp GCSEEEEECSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEE-EESSCCTTTHHHHHTTTCCEEEE
T ss_pred cCCEEEEeeecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEE-EECCcCHHHHHHHHHcCCCEEEE
Confidence 4677776555677655 455566554211 1145554 45555577888999999998754
No 343
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=55.69 E-value=70 Score=25.26 Aligned_cols=17 Identities=18% Similarity=0.124 Sum_probs=9.4
Q ss_pred HHHHHHhhcCCCEEEEE
Q 026239 29 KLIERLLKTSSYQVTTV 45 (241)
Q Consensus 29 ~~l~~~L~~~g~~v~~~ 45 (241)
..+...++..||.+..+
T Consensus 28 ~gi~~~a~~~g~~~~~~ 44 (287)
T 3bbl_A 28 SSMVREAGAVNYFVLPF 44 (287)
T ss_dssp HHHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHHcCCEEEEE
Confidence 34455555666666544
No 344
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=55.48 E-value=80 Score=25.42 Aligned_cols=86 Identities=12% Similarity=0.080 Sum_probs=53.5
Q ss_pred HHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC-CC--CCCHHHHHHHHHhcCC
Q 026239 29 KLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC-MP--GMTGYDLLKKIKESSS 104 (241)
Q Consensus 29 ~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~-mp--~~~g~~ll~~ir~~~~ 104 (241)
..+....+..|..+. .+.+.+|+...+... .+|+|-+... +- +.| ++....+...-+
T Consensus 140 ~~l~~~a~~lGl~~lvEv~~~eE~~~A~~l~------------------g~~iIGinnr~l~t~~~d-~~~~~~l~~~ip 200 (251)
T 1i4n_A 140 KEIYEAAEELGMDSLVEVHSREDLEKVFSVI------------------RPKIIGINTRDLDTFEIK-KNVLWELLPLVP 200 (251)
T ss_dssp HHHHHHHHTTTCEEEEEECSHHHHHHHHTTC------------------CCSEEEEECBCTTTCCBC-TTHHHHHGGGSC
T ss_pred HHHHHHHHHcCCeEEEEeCCHHHHHHHHhcC------------------CCCEEEEeCcccccCCCC-HHHHHHHHHhCC
Confidence 334444456788765 678899887766431 2346655432 11 122 445555554432
Q ss_pred CCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 105 LRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 105 ~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.++++|.-++-..++.+.++.+. +++||.
T Consensus 201 -~~~~vIaEsGI~t~edv~~~~~~-a~avLV 229 (251)
T 1i4n_A 201 -DDTVVVAESGIKDPRELKDLRGK-VNAVLV 229 (251)
T ss_dssp -TTSEEEEESCCCCGGGHHHHTTT-CSEEEE
T ss_pred -CCCEEEEeCCCCCHHHHHHHHHh-CCEEEE
Confidence 25677777777789999999999 999865
No 345
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=55.48 E-value=16 Score=29.45 Aligned_cols=53 Identities=23% Similarity=0.314 Sum_probs=33.5
Q ss_pred ccEEEEeCCCCCCC---HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHH
Q 026239 78 VNLVITDYCMPGMT---GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLS 141 (241)
Q Consensus 78 ~dlIilD~~mp~~~---g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~ 141 (241)
.|+|.+... .+++ .+++++.+|+ .++|||+|+..... +..|+++||.--+..+
T Consensus 34 aD~ielG~S-~Gvt~~~~~~~v~~ir~----~~~Pivlm~y~~n~------i~~G~dg~iiPdLp~e 89 (240)
T 1viz_A 34 TDAVIIGGS-DGVTEDNVLRMMSKVRR----FLVPCVLEVSAIEA------IVPGFDLYFIPSVLNS 89 (240)
T ss_dssp CSEEEECC-----CHHHHHHHHHHHTT----SSSCEEEECSCGGG------CCSCCSEEEEEEETTB
T ss_pred CCEEEECCC-CCCCHHHHHHHHHHhhC----cCCCEEEecCcccc------ccCCCCEEEEcccCcc
Confidence 457777653 2222 5677777776 28999999987422 2679999987644333
No 346
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=55.29 E-value=56 Score=26.88 Aligned_cols=103 Identities=14% Similarity=0.124 Sum_probs=55.8
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
+++|.||.--..-...+..+....+++++ .++...+..+.+... +.+-.. +--
T Consensus 3 ~~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~-------------------~~~~~~-------~~~ 56 (331)
T 4hkt_A 3 TVRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGA-------------------YGCEVR-------TID 56 (331)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHH-------------------TTCEEC-------CHH
T ss_pred ceEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHH-------------------hCCCcC-------CHH
Confidence 47888998876666555555554577776 455433333333211 112111 222
Q ss_pred HHHHHHHhcCCCCCCcEEEEcc--CCChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 94 DLLKKIKESSSLRDIPVVIMSS--ENVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~--~~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
+++. . . ++-+|+++. ....+.+..|++.|..=|+-||+ +.++..++....
T Consensus 57 ~~l~---~-~---~~D~V~i~tp~~~h~~~~~~al~~gk~v~~EKP~~~~~~~~~~l~~~a 110 (331)
T 4hkt_A 57 AIEA---A-A---DIDAVVICTPTDTHADLIERFARAGKAIFCEKPIDLDAERVRACLKVV 110 (331)
T ss_dssp HHHH---C-T---TCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHH
T ss_pred HHhc---C-C---CCCEEEEeCCchhHHHHHHHHHHcCCcEEEecCCCCCHHHHHHHHHHH
Confidence 3332 1 1 333444433 23455677888999888889995 556665555443
No 347
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=55.25 E-value=28 Score=28.65 Aligned_cols=41 Identities=24% Similarity=0.280 Sum_probs=24.8
Q ss_pred CcEEEEccCC--ChHHHHHHHHhcccccccCCC--CHHHHHHhhH
Q 026239 108 IPVVIMSSEN--VPSRISRCLEEGAEEFFLKPV--RLSDLNKLKP 148 (241)
Q Consensus 108 ipvIils~~~--~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~ 148 (241)
+-+|+++... ..+.+..|++.|..=|+-||+ +.++..++..
T Consensus 66 ~D~V~i~tp~~~h~~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~ 110 (319)
T 1tlt_A 66 CDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVE 110 (319)
T ss_dssp CSEEEECSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHH
T ss_pred CCEEEEeCCchhHHHHHHHHHHcCCeEEEeCCCCCCHHHHHHHHH
Confidence 3344444433 345667788888877888986 4555544443
No 348
>2i1o_A Nicotinate phosphoribosyltransferase; ZIN ION, zinc finger M structural genomics, PSI, protein structure initiative; 2.40A {Thermoplasma acidophilum} PDB: 1ytd_A* 1yte_A* 1ytk_A
Probab=54.75 E-value=1e+02 Score=26.55 Aligned_cols=87 Identities=16% Similarity=0.168 Sum_probs=55.6
Q ss_pred HHHHHHHhhcCCC---EEEEECC----HHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC-CCCHHHHHHHH
Q 026239 28 RKLIERLLKTSSY---QVTTVDS----GSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP-GMTGYDLLKKI 99 (241)
Q Consensus 28 ~~~l~~~L~~~g~---~v~~~~~----~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp-~~~g~~ll~~i 99 (241)
...++.+.+..+. .+..+++ ..+|++.+... ..+|.|-+|-.-+ ..+-.++.+++
T Consensus 197 ~~A~~~~~~~~p~~~~~~vlvDT~d~~~~~al~~a~~l-----------------~~~d~IrlDs~~~~~gd~~~~v~~v 259 (398)
T 2i1o_A 197 EEAWKLTLENTKNGQKSVLLIDTYMDEKFAAIKIAEMF-----------------DKVDYIRLDTPSSRRGNFEALIREV 259 (398)
T ss_dssp HHHHHHHHHTCCTTSCCEEECCSSSCHHHHHHHHHTTC-----------------SCCCEEEECCCGGGCSCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCEEEEEcCchHHHHHHHHHHHhh-----------------cCCcEEEeCCCCCCcccHHHHHHHH
Confidence 5566666666654 2445665 46677765321 1367999996433 14566677766
Q ss_pred Hhc----CCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 100 KES----SSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 100 r~~----~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
+.. . +++ ..|+.|+.-+.+.+....+.|++.|
T Consensus 260 ~~~ld~~G-~~~-~~I~aSggl~~~~i~~l~~~GvD~~ 295 (398)
T 2i1o_A 260 RWELALRG-RSD-IKIMVSGGLDENTVKKLREAGAEAF 295 (398)
T ss_dssp HHHHHHTT-CTT-SEEEEESSCCHHHHHHHHHTTCCEE
T ss_pred HHHHHhCC-CCc-eEEEEeCCCCHHHHHHHHHcCCCEE
Confidence 632 2 224 4778888889999999999998443
No 349
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=54.60 E-value=19 Score=28.28 Aligned_cols=58 Identities=17% Similarity=0.271 Sum_probs=36.7
Q ss_pred cccEEEEeCCCCCCCH-------HHHHHHHHhcCC--CCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 77 GVNLVITDYCMPGMTG-------YDLLKKIKESSS--LRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 77 ~~dlIilD~~mp~~~g-------~~ll~~ir~~~~--~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
..|.|+++-..|+.+| ++.++++++... ..++||++..+- .++.+..++++||+.+..
T Consensus 140 ~~d~vl~~~~~pg~~g~~~~~~~~~~i~~l~~~~~~~~~~~pi~v~GGI-~~~n~~~~~~aGad~vvv 206 (230)
T 1rpx_A 140 AVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGV-GPKNAYKVIEAGANALVA 206 (230)
T ss_dssp TCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSC-CTTTHHHHHHHTCCEEEE
T ss_pred hCCEEEEEEEcCCCCCccccHHHHHHHHHHHHHHHhcCCCceEEEECCC-CHHHHHHHHHcCCCEEEE
Confidence 4688888877775433 455566665320 015777665554 467777789999988744
No 350
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=54.35 E-value=94 Score=26.43 Aligned_cols=76 Identities=17% Similarity=0.304 Sum_probs=51.6
Q ss_pred HHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHHHhcCCCCC
Q 026239 28 RKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKIKESSSLRD 107 (241)
Q Consensus 28 ~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ 107 (241)
...|...-+..|..+.+-.-..++++++.... +=++=+.-.+++-+.||+.+... .
T Consensus 80 ~~~L~~~~~~~Gi~~~st~fD~~svd~l~~~~--------------------v~~~KI~S~~~~N~pLL~~va~~----g 135 (350)
T 3g8r_A 80 MQKLVAEMKANGFKAICTPFDEESVDLIEAHG--------------------IEIIKIASCSFTDWPLLERIARS----D 135 (350)
T ss_dssp HHHHHHHHHHTTCEEEEEECSHHHHHHHHHTT--------------------CCEEEECSSSTTCHHHHHHHHTS----C
T ss_pred HHHHHHHHHHcCCcEEeccCCHHHHHHHHHcC--------------------CCEEEECcccccCHHHHHHHHhh----C
Confidence 34555666778887765444455677774321 33445556678899999999874 5
Q ss_pred CcEEEEccCCChHHHHHHHH
Q 026239 108 IPVVIMSSENVPSRISRCLE 127 (241)
Q Consensus 108 ipvIils~~~~~~~~~~~l~ 127 (241)
.|||+=|+-...+.+..+.+
T Consensus 136 KPviLstGmstl~Ei~~Ave 155 (350)
T 3g8r_A 136 KPVVASTAGARREDIDKVVS 155 (350)
T ss_dssp SCEEEECTTCCHHHHHHHHH
T ss_pred CcEEEECCCCCHHHHHHHHH
Confidence 79999999888777766543
No 351
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=54.35 E-value=25 Score=30.08 Aligned_cols=56 Identities=11% Similarity=0.018 Sum_probs=39.1
Q ss_pred cccEEEEeCCCCCCC-HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 77 GVNLVITDYCMPGMT-GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 77 ~~dlIilD~~mp~~~-g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.+|+|.+|....... -++.+++||+..+ ++|||+= .-.+.+.+..+.++|||.+..
T Consensus 112 GvdvI~id~a~G~~~~~~e~I~~ir~~~~--~~~Vi~G-~V~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 112 GADFFCVDVAHAHAKYVGKTLKSLRQLLG--SRCIMAG-NVATYAGADYLASCGADIIKA 168 (361)
T ss_dssp TCCEEEEECSCCSSHHHHHHHHHHHHHHT--TCEEEEE-EECSHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEeCCCCCcHhHHHHHHHHHHhcC--CCeEEEc-CcCCHHHHHHHHHcCCCEEEE
Confidence 467999997653322 2578899998643 6788761 124567788899999987764
No 352
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=53.91 E-value=23 Score=28.50 Aligned_cols=52 Identities=23% Similarity=0.436 Sum_probs=37.4
Q ss_pred cccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCC--hHH----HHHHHHhccccccc
Q 026239 77 GVNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENV--PSR----ISRCLEEGAEEFFL 135 (241)
Q Consensus 77 ~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~--~~~----~~~~l~~Ga~~~l~ 135 (241)
.+|+|.+.+ + .|++.++.++... ++||++..+-.. .+. +..+++.||+++..
T Consensus 179 Gad~i~~~~--~--~~~~~l~~i~~~~---~ipvva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 179 GADIVKTSY--T--GDIDSFRDVVKGC---PAPVVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp TCSEEEECC--C--SSHHHHHHHHHHC---SSCEEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred CCCEEEECC--C--CCHHHHHHHHHhC---CCCEEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 356888874 2 4689999998754 689999887663 334 66677899988743
No 353
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=53.80 E-value=27 Score=25.25 Aligned_cols=109 Identities=16% Similarity=0.144 Sum_probs=57.2
Q ss_pred cceEEEEeCC---HHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 15 QFHVLAVDDS---IIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 15 ~~~ILiVdd~---~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
..+|.||.-+ ...-..+.+.|...||.|+.++...+.+ .+..... ++. .-...+|++++ ..|...
T Consensus 14 p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i--~G~~~~~-----s~~---el~~~vDlvii--~vp~~~ 81 (138)
T 1y81_A 14 FRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI--EGLKCYR-----SVR---ELPKDVDVIVF--VVPPKV 81 (138)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE--TTEECBS-----SGG---GSCTTCCEEEE--CSCHHH
T ss_pred CCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE--CCeeecC-----CHH---HhCCCCCEEEE--EeCHHH
Confidence 4678888762 2233344444566799887665432211 1110000 000 01235788887 566656
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRL 140 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~ 140 (241)
-.++++.+.+... . -+++.++....+....+.+.|+. ++-|-..
T Consensus 82 v~~v~~~~~~~g~--~-~i~~~~~~~~~~l~~~a~~~Gi~--~igpnc~ 125 (138)
T 1y81_A 82 GLQVAKEAVEAGF--K-KLWFQPGAESEEIRRFLEKAGVE--YSFGRCI 125 (138)
T ss_dssp HHHHHHHHHHTTC--C-EEEECTTSCCHHHHHHHHHHTCE--EECSCCH
T ss_pred HHHHHHHHHHcCC--C-EEEEcCccHHHHHHHHHHHCCCE--EEcCCcc
Confidence 6777777665332 1 25555555566666666677764 3345443
No 354
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=53.77 E-value=28 Score=29.61 Aligned_cols=40 Identities=8% Similarity=-0.012 Sum_probs=33.6
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
+++++.|++... .++|||...+-.+.+.+.+++.+||+.+
T Consensus 262 ~~~v~~i~~~~~-~~ipIIg~GGI~s~~da~~~l~aGAd~V 301 (345)
T 3oix_A 262 LANVHAFYKRLN-PSIQIIGTGGVXTGRDAFEHILCGASMV 301 (345)
T ss_dssp HHHHHHHHTTSC-TTSEEEEESSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHcC-CCCcEEEECCCCChHHHHHHHHhCCCEE
Confidence 678888887542 2699999999999999999999999875
No 355
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=53.62 E-value=51 Score=27.03 Aligned_cols=20 Identities=15% Similarity=0.009 Sum_probs=13.8
Q ss_pred HHHHHHHHhhcCCCEEEEEC
Q 026239 27 DRKLIERLLKTSSYQVTTVD 46 (241)
Q Consensus 27 ~~~~l~~~L~~~g~~v~~~~ 46 (241)
+...+...+...||.+..+.
T Consensus 86 ~~~gi~~~a~~~g~~~~~~~ 105 (344)
T 3kjx_A 86 VLTGINQVLEDTELQPVVGV 105 (344)
T ss_dssp HHHHHHHHHTSSSSEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 44566677778899887653
No 356
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=53.33 E-value=5.8 Score=32.85 Aligned_cols=95 Identities=14% Similarity=0.199 Sum_probs=56.5
Q ss_pred HhhcCCCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC----CC-CCHHHHHHHHHhcCCCC
Q 026239 34 LLKTSSYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM----PG-MTGYDLLKKIKESSSLR 106 (241)
Q Consensus 34 ~L~~~g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m----p~-~~g~~ll~~ir~~~~~~ 106 (241)
.|+..|+.+. -+.+|...+..+.. .++|.|=+|-.+ .. .....+++.|-.....-
T Consensus 171 ~Lr~~G~~ialDDFGtG~ssl~~L~~------------------l~~d~iKID~sfv~~i~~~~~~~~iv~~ii~la~~l 232 (294)
T 2r6o_A 171 ALRARGVRLALDDFGTGYSSLSYLSQ------------------LPFHGLKIDQSFVRKIPAHPSETQIVTTILALARGL 232 (294)
T ss_dssp HHHHHTCEEEEEEETSSCBCHHHHHH------------------SCCCEEEECHHHHTTTTTSHHHHHHHHHHHHHHHHT
T ss_pred HHHHCCCEEEEECCCCCchhHHHHHh------------------CCCCEEEECHHHHhhhhcChHHHHHHHHHHHHHHHC
Confidence 4556677665 45566666666643 345688888433 11 12334455443322111
Q ss_pred CCcEEEEccCCChHHHHHHHHhcccc----cccCCCCHHHHHHhh
Q 026239 107 DIPVVIMSSENVPSRISRCLEEGAEE----FFLKPVRLSDLNKLK 147 (241)
Q Consensus 107 ~ipvIils~~~~~~~~~~~l~~Ga~~----~l~KP~~~~~L~~~~ 147 (241)
++.|| ..+-.+.+....+.+.|++. |+.||...+++...+
T Consensus 233 g~~vv-AEGVEt~~q~~~l~~lG~d~~QGy~~~~P~~~~~~~~~l 276 (294)
T 2r6o_A 233 GMEVV-AEGIETAQQYAFLRDRGCEFGQGNLMSTPQAADAFASLL 276 (294)
T ss_dssp TCEEE-ECCCCSHHHHHHHHHTTCCEECSTTTCCCEEHHHHHHHH
T ss_pred CCEEE-EecCCcHHHHHHHHHcCCCEEEcCccCCCCCHHHHHHHH
Confidence 45444 55666777778888999873 588999988876543
No 357
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=53.30 E-value=47 Score=24.17 Aligned_cols=67 Identities=13% Similarity=0.099 Sum_probs=42.6
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCE--EE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQ--VT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~--v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
..+|..||-++......+..+...+.. +. ...+..+.+... ...||+|++|.......
T Consensus 54 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-------------------~~~fD~i~~~~~~~~~~ 114 (177)
T 2esr_A 54 MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL-------------------TGRFDLVFLDPPYAKET 114 (177)
T ss_dssp CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB-------------------CSCEEEEEECCSSHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh-------------------cCCCCEEEECCCCCcch
Confidence 368999999999888888888777642 54 345555544332 12488999984331122
Q ss_pred HHHHHHHHH
Q 026239 92 GYDLLKKIK 100 (241)
Q Consensus 92 g~~ll~~ir 100 (241)
..++++.+.
T Consensus 115 ~~~~~~~l~ 123 (177)
T 2esr_A 115 IVATIEALA 123 (177)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 345566665
No 358
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=53.16 E-value=29 Score=27.64 Aligned_cols=102 Identities=9% Similarity=0.052 Sum_probs=54.9
Q ss_pred HHHHHHHHhhcCCC--EEEEECCHHHHHHHhcccCCCCCCCCCCC--C----CCcccccccEEEEeCCCCCCCHHHHHHH
Q 026239 27 DRKLIERLLKTSSY--QVTTVDSGSKALEFLGLHEDDGQSSHSVY--P----NMHQEVGVNLVITDYCMPGMTGYDLLKK 98 (241)
Q Consensus 27 ~~~~l~~~L~~~g~--~v~~~~~~~~al~~l~~~~~d~~~~~~~~--~----~~~~~~~~dlIilD~~mp~~~g~~ll~~ 98 (241)
....+..+++..++ .|.+.+-..+++..++...|+.....-.. + .......++.+-+++.+- .-++++.
T Consensus 130 ~~~~v~~~l~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~---~~~~v~~ 206 (252)
T 2pz0_A 130 IEEKLIKAIKEYNFEERVIISSFNHYSLRDVKKMAPHLKIGLLYQCGLVEPWHMALRMEAYSLHPFYFNI---IPELVEG 206 (252)
T ss_dssp HHHHHHHHHHHTTCTTTEEEEESBHHHHHHHHHHCTTSEEEEEECSBCSSTHHHHHHTTCSEEEEBGGGC---CHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCCEEEEecCccccHHHHHHHcCCeEEecchhcC---CHHHHHH
Confidence 34455666665553 34443333455666655444321000000 0 001122344555555432 2467777
Q ss_pred HHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 99 IKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 99 ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
++.. .++|.+.|- +++..+.++++.|++++++-
T Consensus 207 ~~~~----G~~v~~wTv-n~~~~~~~l~~~GvdgIiTD 239 (252)
T 2pz0_A 207 CKKN----GVKLFPWTV-DRKEDMERMIKAGVDGIITD 239 (252)
T ss_dssp HHHT----TCEECCBCC-CSHHHHHHHHHHTCSEEEES
T ss_pred HHHC----CCEEEEECC-CCHHHHHHHHHcCCCEEEcC
Confidence 7764 567887774 56778888999999998863
No 359
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=52.89 E-value=69 Score=26.35 Aligned_cols=69 Identities=17% Similarity=0.143 Sum_probs=42.4
Q ss_pred cceEEEEeCCHHHHHHHHHHhhc--CC----CEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKT--SS----YQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM 87 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~--~g----~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m 87 (241)
..+|..||-++...+..++.+.. .| -.+. ...|+.+.+... ...||+||+|...
T Consensus 101 ~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-------------------~~~fD~Ii~d~~~ 161 (314)
T 1uir_A 101 VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT-------------------EERYDVVIIDLTD 161 (314)
T ss_dssp CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC-------------------CCCEEEEEEECCC
T ss_pred CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc-------------------CCCccEEEECCCC
Confidence 35788888888887777776643 11 1233 455665554331 2358999999876
Q ss_pred CC-CCH-------HHHHHHHHhc
Q 026239 88 PG-MTG-------YDLLKKIKES 102 (241)
Q Consensus 88 p~-~~g-------~~ll~~ir~~ 102 (241)
+. .+| .++++.++..
T Consensus 162 ~~~~~~~~~~l~~~~~l~~~~~~ 184 (314)
T 1uir_A 162 PVGEDNPARLLYTVEFYRLVKAH 184 (314)
T ss_dssp CBSTTCGGGGGSSHHHHHHHHHT
T ss_pred cccccCcchhccHHHHHHHHHHh
Confidence 64 112 4677777654
No 360
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=52.86 E-value=43 Score=26.44 Aligned_cols=88 Identities=14% Similarity=0.146 Sum_probs=50.0
Q ss_pred HHHHhhcCCC-EEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCc
Q 026239 31 IERLLKTSSY-QVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKIKESSSLRDIP 109 (241)
Q Consensus 31 l~~~L~~~g~-~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ip 109 (241)
+...|...+. -|....+.+++++.++.. .+..+++|=+. +...++.++++.++...+ ++-
T Consensus 19 ~~~~l~~~~ii~V~r~~~~~~~~~~~~al---------------~~gGv~~iel~--~k~~~~~~~i~~l~~~~~--~~~ 79 (225)
T 1mxs_A 19 IDAICEKARILPVITIAREEDILPLADAL---------------AAGGIRTLEVT--LRSQHGLKAIQVLREQRP--ELC 79 (225)
T ss_dssp HHHHHHHHSEEEEECCSCGGGHHHHHHHH---------------HHTTCCEEEEE--SSSTHHHHHHHHHHHHCT--TSE
T ss_pred HHHHHHHCCEEEEEeCCCHHHHHHHHHHH---------------HHCCCCEEEEe--cCCccHHHHHHHHHHhCc--ccE
Confidence 3344555553 334455666666555322 12234455554 445678888988877643 444
Q ss_pred EEEEccCCChHHHHHHHHhcccccccCCCC
Q 026239 110 VVIMSSENVPSRISRCLEEGAEEFFLKPVR 139 (241)
Q Consensus 110 vIils~~~~~~~~~~~l~~Ga~~~l~KP~~ 139 (241)
+-.=| --+.+.+..|+.+||+..+. |-.
T Consensus 80 igagt-vl~~d~~~~A~~aGAd~v~~-p~~ 107 (225)
T 1mxs_A 80 VGAGT-VLDRSMFAAVEAAGAQFVVT-PGI 107 (225)
T ss_dssp EEEEC-CCSHHHHHHHHHHTCSSEEC-SSC
T ss_pred EeeCe-EeeHHHHHHHHHCCCCEEEe-CCC
Confidence 33323 34567888899999975554 533
No 361
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=52.84 E-value=31 Score=28.76 Aligned_cols=54 Identities=11% Similarity=0.238 Sum_probs=41.8
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHL 150 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l 150 (241)
-+.++.+|+..+ ..||.+-... .+.+.+++++|+|-.++..++++++.+++..+
T Consensus 195 ~~Av~~ar~~~p--~~kIeVEv~t--l~e~~eAl~aGaDiImLDn~s~~~l~~av~~~ 248 (300)
T 3l0g_A 195 TLAIQRLRKNLK--NEYIAIECDN--ISQVEESLSNNVDMILLDNMSISEIKKAVDIV 248 (300)
T ss_dssp HHHHHHHHHHSS--SCCEEEEESS--HHHHHHHHHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC--CCCEEEEECC--HHHHHHHHHcCCCEEEECCCCHHHHHHHHHhh
Confidence 466777887654 6788876543 57888999999999999999999987766543
No 362
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=52.68 E-value=60 Score=25.34 Aligned_cols=55 Identities=16% Similarity=0.211 Sum_probs=32.8
Q ss_pred ccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCC
Q 026239 78 VNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPV 138 (241)
Q Consensus 78 ~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~ 138 (241)
+++|=+. +...++.+.++.++...+ ++-+- ...--+.+.+..|+++||+..+ -|-
T Consensus 42 v~~iel~--~k~~~~~~~i~~l~~~~~--~~~vg-agtvi~~d~~~~A~~aGAd~v~-~p~ 96 (214)
T 1wbh_A 42 VRVLNVT--LRTECAVDAIRAIAKEVP--EAIVG-AGTVLNPQQLAEVTEAGAQFAI-SPG 96 (214)
T ss_dssp CCEEEEE--SCSTTHHHHHHHHHHHCT--TSEEE-EESCCSHHHHHHHHHHTCSCEE-ESS
T ss_pred CCEEEEe--CCChhHHHHHHHHHHHCc--CCEEe-eCEEEEHHHHHHHHHcCCCEEE-cCC
Confidence 4454444 445677888888876543 33322 2224456778888899987554 443
No 363
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=52.60 E-value=28 Score=31.02 Aligned_cols=56 Identities=18% Similarity=0.213 Sum_probs=41.3
Q ss_pred cccEEEEeCCCCCC-CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 77 GVNLVITDYCMPGM-TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 77 ~~dlIilD~~mp~~-~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.+|+|.+|...+.. .-+++++++++..+ ++||++- .-...+.+..+.++||+.+..
T Consensus 241 G~d~I~id~a~g~~~~~~~~v~~i~~~~p--~~~Vi~g-~v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 241 GVDVVVVDTAHGHSKGVIERVRWVKQTFP--DVQVIGG-NIATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp TCSEEEEECSCCSBHHHHHHHHHHHHHCT--TSEEEEE-EECSHHHHHHHHHTTCSEEEE
T ss_pred ccceEEecccCCcchhHHHHHHHHHHHCC--CceEEEe-eeCcHHHHHHHHHcCCCEEEE
Confidence 46799999877653 34588999998653 6788763 234567788899999987764
No 364
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=52.54 E-value=58 Score=29.19 Aligned_cols=113 Identities=14% Similarity=0.116 Sum_probs=55.7
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhccc-CCCCCCCCCCCCCC---cccccccEEEEeCCCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLH-EDDGQSSHSVYPNM---HQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~-~~d~~~~~~~~~~~---~~~~~~dlIilD~~mp~~ 90 (241)
..||+|+.....-+.. .+.|...|+.|+.++...+.++.+... ....-.+.+..+.. ..-...+.+|+ ...+.
T Consensus 127 ~~hviI~G~g~~g~~l-a~~L~~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~~vi~--t~~D~ 203 (565)
T 4gx0_A 127 RGHILIFGIDPITRTL-IRKLESRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAARSIIA--NLSDP 203 (565)
T ss_dssp CSCEEEESCCHHHHHH-HHHTTTTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCSEEEE--CSCHH
T ss_pred CCeEEEECCChHHHHH-HHHHHHCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCCEEEE--eCCcH
Confidence 3567777776655443 344555666666665555555444322 10000000000000 01123567776 23333
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
....++..+|... .++||+.... ++.......+|++..+.
T Consensus 204 ~n~~~~~~ar~~~---~~~iiar~~~--~~~~~~l~~~Gad~vi~ 243 (565)
T 4gx0_A 204 DNANLCLTVRSLC---QTPIIAVVKE--PVHGELLRLAGANQVVP 243 (565)
T ss_dssp HHHHHHHHHHTTC---CCCEEEECSS--GGGHHHHHHHTCSEEEC
T ss_pred HHHHHHHHHHHhc---CceEEEEECC--HHHHHHHHHcCCCEEEC
Confidence 3344555566543 6788776643 34445566889986554
No 365
>4adt_A Pyridoxine biosynthetic enzyme PDX1 homologue, PU; transferase, pyridoxal 5-phosphate biosynthesis; 2.42A {Plasmodium berghei} PDB: 4adu_A* 4ads_A
Probab=52.47 E-value=95 Score=25.66 Aligned_cols=82 Identities=11% Similarity=-0.057 Sum_probs=49.1
Q ss_pred HHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEE-----eCCCCC----CCHHHHHHHH
Q 026239 29 KLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVIT-----DYCMPG----MTGYDLLKKI 99 (241)
Q Consensus 29 ~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIil-----D~~mp~----~~g~~ll~~i 99 (241)
..+..+|+ |-.+.-+.+.+.|..+-.... + .|.++ |..-.+ ++.++.++.+
T Consensus 14 ~~~~~~~k--ggv~~d~~~~e~A~~ye~~GA-~-----------------~lsvLe~~~~Di~~~~g~~R~~~~~~i~~i 73 (297)
T 4adt_A 14 HGWCEMLK--GGVIMDVKNVEQAKIAEKAGA-I-----------------GVMILENIPSELRNTDGVARSVDPLKIEEI 73 (297)
T ss_dssp HHHHHTTT--TCEEEEESSHHHHHHHHHHTC-S-----------------EEEECCCCC-----CCCCCCCCCHHHHHHH
T ss_pred HhHHHHhc--CCcccCCCcHHHHHHHHHcCC-C-----------------EEEEecCCCCcchhcCCcccCCCHHHHHHH
Confidence 34444443 445567777777654432221 1 15555 554333 3579999999
Q ss_pred HhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 100 KESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 100 r~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
++.. ++||+.-...........+..+||+.+
T Consensus 74 ~~~v---~iPvl~k~~i~~ide~qil~aaGAD~I 104 (297)
T 4adt_A 74 RKCI---SINVLAKVRIGHFVEAQILEELKVDML 104 (297)
T ss_dssp HTTC---CSEEEEEEETTCHHHHHHHHHTTCSEE
T ss_pred HHhc---CCCEEEeccCCcHHHHHHHHHcCCCEE
Confidence 9854 799987654444666677778999876
No 366
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=52.41 E-value=39 Score=27.93 Aligned_cols=20 Identities=10% Similarity=0.082 Sum_probs=13.1
Q ss_pred HHHHHHHHhhcCCCEEEEEC
Q 026239 27 DRKLIERLLKTSSYQVTTVD 46 (241)
Q Consensus 27 ~~~~l~~~L~~~g~~v~~~~ 46 (241)
+...+...+...||.+..+.
T Consensus 88 ~~~gi~~~a~~~g~~~~~~~ 107 (355)
T 3e3m_A 88 TAQSLTDVLEQGGLQLLLGY 107 (355)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 34456666677888887653
No 367
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=52.38 E-value=60 Score=27.11 Aligned_cols=107 Identities=16% Similarity=0.207 Sum_probs=54.4
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHH-HHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSK-ALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~-al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
..+++|.||.--..-+..+..+....+++++ +++...+ +-.+...... ..+.-..+
T Consensus 4 ~~~~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~~~~a~~~~~----------------~~~~~~~~------ 61 (362)
T 1ydw_A 4 ETQIRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNY----------------PESTKIHG------ 61 (362)
T ss_dssp --CEEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTC----------------CTTCEEES------
T ss_pred CCceEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHHHHHHHHhCC----------------CCCCeeeC------
Confidence 3468999999876666555555544567765 4443333 3333221110 00011111
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCC--ChHHHHHHHHhcccccccCCCC--HHHHHHhhH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSEN--VPSRISRCLEEGAEEFFLKPVR--LSDLNKLKP 148 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~--~~~~~~~~l~~Ga~~~l~KP~~--~~~L~~~~~ 148 (241)
+--+++ ... ++-+|+++... ..+.+..|+++|..=|+-||+. .++..++..
T Consensus 62 ~~~~ll---~~~----~~D~V~i~tp~~~h~~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~ 116 (362)
T 1ydw_A 62 SYESLL---EDP----EIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVD 116 (362)
T ss_dssp SHHHHH---HCT----TCCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHH
T ss_pred CHHHHh---cCC----CCCEEEEcCChHHHHHHHHHHHHCCCeEEEecCCcCCHHHHHHHHH
Confidence 111222 221 34444444433 3566778899999888999964 455444443
No 368
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=52.31 E-value=37 Score=29.08 Aligned_cols=44 Identities=14% Similarity=0.172 Sum_probs=30.0
Q ss_pred CCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 107 DIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 107 ~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
++-+|+++.. .-.+.+..|+++|.+=|+-||+ +.++..+++...
T Consensus 96 ~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a 143 (412)
T 4gqa_A 96 QVDVVDITSPNHLHYTMAMAAIAAGKHVYCEKPLAVNEQQAQEMAQAA 143 (412)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHH
T ss_pred CCCEEEECCCcHHHHHHHHHHHHcCCCeEeecCCcCCHHHHHHHHHHH
Confidence 4445554443 3456788999999999999997 566666655443
No 369
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=52.27 E-value=21 Score=27.93 Aligned_cols=86 Identities=7% Similarity=0.073 Sum_probs=43.5
Q ss_pred ceEEEEe--CCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC--C
Q 026239 16 FHVLAVD--DSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM--T 91 (241)
Q Consensus 16 ~~ILiVd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~--~ 91 (241)
-+|+++. .+......+...|...|+.+..+.+.......+....++ |++|+ +..+|. +
T Consensus 60 ~~I~i~G~G~S~~~A~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~-----------------DlvI~-iS~SG~t~~ 121 (220)
T 3etn_A 60 GKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQHGDLGILQEN-----------------DLLLL-ISNSGKTRE 121 (220)
T ss_dssp CCEEEECSHHHHHHHHHHHHHHHHTTCCEEECCTTGGGBTGGGGCCTT-----------------CEEEE-ECSSSCCHH
T ss_pred CEEEEEEecHHHHHHHHHHHHHHhcCCcEEEeCCHHHHHhhhccCCCC-----------------CEEEE-EcCCCCCHH
Confidence 3444443 334444555556666777666655443221111111111 23333 344444 3
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSR 121 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~ 121 (241)
-+++++.+++.. ..++||.+|+......
T Consensus 122 ~i~~~~~ak~~~--~Ga~vI~IT~~~~s~L 149 (220)
T 3etn_A 122 IVELTQLAHNLN--PGLKFIVITGNPDSPL 149 (220)
T ss_dssp HHHHHHHHHHHC--TTCEEEEEESCTTSHH
T ss_pred HHHHHHHHHhcC--CCCeEEEEECCCCChh
Confidence 466777777611 1679999998765543
No 370
>2l2q_A PTS system, cellobiose-specific IIB component (CE; cellobiose-specific phosphotransferase IIB component, struct genomics; NMR {Borrelia burgdorferi}
Probab=52.16 E-value=39 Score=23.21 Aligned_cols=75 Identities=17% Similarity=0.198 Sum_probs=41.7
Q ss_pred ceEEEEeCCH----HHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 16 FHVLAVDDSI----IDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 16 ~~ILiVdd~~----~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
++||+|=+.. .....+++.++..|+.+. .+.+..++-..+ ..+|+||+-..+...
T Consensus 5 mkIlvvC~~G~~TSll~~kl~~~~~~~gi~~~i~~~~~~~~~~~~--------------------~~~D~Ii~t~~l~~~ 64 (109)
T 2l2q_A 5 MNILLVCGAGMSTSMLVQRIEKYAKSKNINATIEAIAETRLSEVV--------------------DRFDVVLLAPQSRFN 64 (109)
T ss_dssp EEEEEESSSSCSSCHHHHHHHHHHHHHTCSEEEEEECSTTHHHHT--------------------TTCSEEEECSCCSSH
T ss_pred eEEEEECCChHhHHHHHHHHHHHHHHCCCCeEEEEecHHHHHhhc--------------------CCCCEEEECCccHHH
Confidence 6777775432 566678888887776533 233333333332 136799997766542
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEcc
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSS 115 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~ 115 (241)
++-++..-.. .++||++++.
T Consensus 65 --~~~~~~~~~~---~~~pv~~I~~ 84 (109)
T 2l2q_A 65 --KKRLEEITKP---KGIPIEIINT 84 (109)
T ss_dssp --HHHHHHHHHH---HTCCEEECCH
T ss_pred --HHHHHHHhcc---cCCCEEEECh
Confidence 3333322111 1579988765
No 371
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=51.98 E-value=76 Score=24.12 Aligned_cols=71 Identities=8% Similarity=0.048 Sum_probs=45.1
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCC--EEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSY--QVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
..+|..||-++......+..+...|. .+. ...+..+.+..+.... ....||+|++|.. ..+
T Consensus 94 ~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~--------------~~~~~D~v~~d~~--~~~ 157 (229)
T 2avd_A 94 DGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAG--------------EAGTFDVAVVDAD--KEN 157 (229)
T ss_dssp TCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT--------------CTTCEEEEEECSC--STT
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcC--------------CCCCccEEEECCC--HHH
Confidence 46899999999888888888877664 344 4566666655442110 0135889999865 233
Q ss_pred HHHHHHHHHh
Q 026239 92 GYDLLKKIKE 101 (241)
Q Consensus 92 g~~ll~~ir~ 101 (241)
-..+++.+..
T Consensus 158 ~~~~l~~~~~ 167 (229)
T 2avd_A 158 CSAYYERCLQ 167 (229)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3455555543
No 372
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=51.93 E-value=72 Score=25.89 Aligned_cols=105 Identities=15% Similarity=0.118 Sum_probs=55.6
Q ss_pred CcceEEEEeCCHHHHHHHHHHhh-cCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLK-TSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~-~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
.+++|.||.--..-...+...|. ..++++. .++...+..+.+... +.+-. + .+
T Consensus 5 ~~~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~-------------------~~~~~--~----~~ 59 (308)
T 3uuw_A 5 KNIKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKREKICSD-------------------YRIMP--F----DS 59 (308)
T ss_dssp CCCEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHHHHHHHH-------------------HTCCB--C----SC
T ss_pred ccCcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHH-------------------cCCCC--c----CC
Confidence 35899999988776653444444 4577777 455433333333211 00100 0 12
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
--+++. .. ++-+|.+......+.+..++++|..=|+-||+ +.++..++....
T Consensus 60 ~~~ll~-----~~--D~V~i~tp~~~h~~~~~~al~~gk~vl~EKP~~~~~~~~~~l~~~a 113 (308)
T 3uuw_A 60 IESLAK-----KC--DCIFLHSSTETHYEIIKILLNLGVHVYVDKPLASTVSQGEELIELS 113 (308)
T ss_dssp HHHHHT-----TC--SEEEECCCGGGHHHHHHHHHHTTCEEEECSSSSSSHHHHHHHHHHH
T ss_pred HHHHHh-----cC--CEEEEeCCcHhHHHHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHH
Confidence 223333 11 33222222233456677889999998889997 556665555443
No 373
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=51.78 E-value=26 Score=26.89 Aligned_cols=77 Identities=13% Similarity=0.170 Sum_probs=38.8
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEE--EEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC-CCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQV--TTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC-MPGM 90 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v--~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~-mp~~ 90 (241)
...+|+++--....|.....+....|..+ ..+.+..+.++.+. ..+|+||+|=. .-+.
T Consensus 35 ~g~kV~v~k~~~d~r~~~~~i~s~~g~~~~a~~~~~~~~i~~~~~-------------------~~~dvViIDEaqfl~~ 95 (191)
T 1xx6_A 35 AKQKIQVFKPEIDNRYSKEDVVSHMGEKEQAVAIKNSREILKYFE-------------------EDTEVIAIDEVQFFDD 95 (191)
T ss_dssp TTCCEEEEEEC-------CEEECTTSCEEECEEESSSTHHHHHCC-------------------TTCSEEEECSGGGSCT
T ss_pred CCCEEEEEEeccCccchHHHHHhhcCCceeeEeeCCHHHHHHHHh-------------------ccCCEEEEECCCCCCH
Confidence 45778877422222322223344445443 24555556665542 13679999942 1112
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEE
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIM 113 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIil 113 (241)
+-+++++.+... .+|||+.
T Consensus 96 ~~v~~l~~l~~~----~~~Vi~~ 114 (191)
T 1xx6_A 96 EIVEIVNKIAES----GRRVICA 114 (191)
T ss_dssp HHHHHHHHHHHT----TCEEEEE
T ss_pred HHHHHHHHHHhC----CCEEEEE
Confidence 336777776642 5787765
No 374
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=51.67 E-value=38 Score=30.33 Aligned_cols=56 Identities=14% Similarity=0.238 Sum_probs=41.3
Q ss_pred cccEEEEeCCCCCCCH-HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 77 GVNLVITDYCMPGMTG-YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 77 ~~dlIilD~~mp~~~g-~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.+|+|++|...+...+ +++++++++..+ ++|||+- .-...+.+..+.++||+.+..
T Consensus 268 Gvd~I~Id~a~g~~~~v~~~i~~i~~~~~--~~~vi~g-~v~t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 268 SVDAIVLDTAHGHSQGVIDKVKEVRAKYP--SLNIIAG-NVATAEATKALIEAGANVVKV 324 (511)
T ss_dssp TCSEEEEECSCTTSHHHHHHHHHHHHHCT--TSEEEEE-EECSHHHHHHHHHHTCSEEEE
T ss_pred ccceEEecccccchhhhhhHHHHHHHhCC--CceEEee-eeccHHHHHHHHHhCCCEEEE
Confidence 4679999988765544 478999998753 6777753 334677788899999987753
No 375
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=51.64 E-value=8.5 Score=31.00 Aligned_cols=50 Identities=16% Similarity=0.248 Sum_probs=32.9
Q ss_pred ccEEEEeCCCC--CCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 78 VNLVITDYCMP--GMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 78 ~dlIilD~~mp--~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
.|+|++..... ..+-+++++.||+ .++|+|++++.. ..+..|+|+||.-.
T Consensus 37 tDaI~vGgs~gvt~~~~~~~v~~ik~----~~~Piil~p~~~------~~~~~gaD~il~ps 88 (235)
T 3w01_A 37 TDAIMIGGTDDVTEDNVIHLMSKIRR----YPLPLVLEISNI------ESVMPGFDFYFVPT 88 (235)
T ss_dssp CSEEEECCSSCCCHHHHHHHHHHHTT----SCSCEEEECCCS------TTCCTTCSEEEEEE
T ss_pred CCEEEECCcCCcCHHHHHHHHHHhcC----cCCCEEEecCCH------HHhhcCCCEEEEcc
Confidence 45888876431 1234667777776 289999998853 22356999987753
No 376
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=51.56 E-value=68 Score=26.81 Aligned_cols=44 Identities=20% Similarity=0.312 Sum_probs=28.8
Q ss_pred CCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 107 DIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 107 ~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
++-+|+++.. ...+.+..|+++|..=|+-||+ +.++..+++...
T Consensus 65 ~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~e~~~l~~~a 112 (358)
T 3gdo_A 65 AIELVIVTTPSGLHYEHTMACIQAGKHVVMEKPMTATAEEGETLKRAA 112 (358)
T ss_dssp TCCEEEECSCTTTHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHH
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHcCCeEEEecCCcCCHHHHHHHHHHH
Confidence 3444444433 3466678899999999999996 466666555443
No 377
>2gk3_A Putative cytoplasmic protein; STM3548, structural genomics, PSI, P structure initiative; 2.25A {Salmonella typhimurium} SCOP: c.23.16.9
Probab=51.55 E-value=21 Score=28.80 Aligned_cols=33 Identities=12% Similarity=0.217 Sum_probs=20.2
Q ss_pred CcceEEEEeCC------------------H-HHHHHHHHHhhcCCCEEEEEC
Q 026239 14 SQFHVLAVDDS------------------I-IDRKLIERLLKTSSYQVTTVD 46 (241)
Q Consensus 14 ~~~~ILiVdd~------------------~-~~~~~l~~~L~~~g~~v~~~~ 46 (241)
.+++||+|... . .....+..+|+..+++|+...
T Consensus 9 ~~~~vll~~~sw~~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~~~~~v~~~~ 60 (256)
T 2gk3_A 9 KKLKVLFIGESWHIHMIHSKGYDSFTSSKYEEGATWLLECLRKGGVDIDYMP 60 (256)
T ss_dssp --CEEEEEECEEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred hhcEEEEecCccceeeEeecccccccccCccccHHHHHHHHHhcCceEEEEe
Confidence 45799999444 1 122345666766799988773
No 378
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=51.36 E-value=13 Score=30.90 Aligned_cols=93 Identities=17% Similarity=0.215 Sum_probs=52.2
Q ss_pred EEEEeCCHHH----HHHHHHHhhcCCC--E-EEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 18 VLAVDDSIID----RKLIERLLKTSSY--Q-VTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 18 ILiVdd~~~~----~~~l~~~L~~~g~--~-v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
|||-|++... ...++..-+..++ . ...+++.+++.+.+.. ..|+|.+|-. +..
T Consensus 166 vlikdnHi~~~G~i~~av~~ar~~~~~~~~I~VEV~tleea~eA~~a-------------------GaD~I~LDn~-~~e 225 (285)
T 1o4u_A 166 VMIKDNHLKMYGSAERAVQEVRKIIPFTTKIEVEVENLEDALRAVEA-------------------GADIVMLDNL-SPE 225 (285)
T ss_dssp EEECHHHHHHHSSHHHHHHHHHTTSCTTSCEEEEESSHHHHHHHHHT-------------------TCSEEEEESC-CHH
T ss_pred EEEchhHHhhcCCHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHc-------------------CCCEEEECCC-CHH
Confidence 5665655433 2234333333333 2 2367889999888752 3569999973 221
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
+--++++.++... +.+|+ ..|+.-+.+.+....+.|+|.+
T Consensus 226 ~l~~av~~l~~~~--~~v~i-eASGGIt~eni~~~a~tGVD~I 265 (285)
T 1o4u_A 226 EVKDISRRIKDIN--PNVIV-EVSGGITEENVSLYDFETVDVI 265 (285)
T ss_dssp HHHHHHHHHHHHC--TTSEE-EEEECCCTTTGGGGCCTTCCEE
T ss_pred HHHHHHHHhhccC--CCceE-EEECCCCHHHHHHHHHcCCCEE
Confidence 2223444444422 24544 4566666777777788888755
No 379
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=51.28 E-value=47 Score=25.98 Aligned_cols=13 Identities=23% Similarity=0.524 Sum_probs=6.1
Q ss_pred HHHHhhcCCCEEE
Q 026239 31 IERLLKTSSYQVT 43 (241)
Q Consensus 31 l~~~L~~~g~~v~ 43 (241)
+...++..||.+.
T Consensus 25 i~~~~~~~g~~~~ 37 (275)
T 3d8u_A 25 FQQALNKAGYQLL 37 (275)
T ss_dssp HHHHHHHTSCEEC
T ss_pred HHHHHHHCCCEEE
Confidence 3344444555544
No 380
>3cg6_A Growth arrest and DNA-damage-inducible 45 gamma; alpha/beta, cell cycle; 1.70A {Mus musculus} PDB: 2wal_A
Probab=51.28 E-value=64 Score=23.80 Aligned_cols=32 Identities=16% Similarity=0.223 Sum_probs=26.7
Q ss_pred HHHHHHHHHHhhcCCCEEEEECCHHHHHHHhc
Q 026239 25 IIDRKLIERLLKTSSYQVTTVDSGSKALEFLG 56 (241)
Q Consensus 25 ~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~ 56 (241)
+...++++.+....+..+..+++....-++++
T Consensus 62 ~~y~kLveAlC~E~~I~lIkVdd~kkLgew~G 93 (146)
T 3cg6_A 62 QIHFTLIQAFCCENDIDIVRVGDVQRLAAIVG 93 (146)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCHHHHHHHC-
T ss_pred HHHHHHHHHHHhhcCCCeEEeCchhHHHHHhC
Confidence 37777888888888999999999999888887
No 381
>1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A*
Probab=51.24 E-value=70 Score=23.52 Aligned_cols=41 Identities=27% Similarity=0.353 Sum_probs=30.5
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
.++++.+++. .++++++|+.........+-..|.+.|+...
T Consensus 41 ~~~l~~L~~~----G~~~~i~Tg~~~~~~~~~~~~lgl~~~~~~~ 81 (180)
T 1k1e_A 41 GLGIKMLMDA----DIQVAVLSGRDSPILRRRIADLGIKLFFLGK 81 (180)
T ss_dssp HHHHHHHHHT----TCEEEEEESCCCHHHHHHHHHHTCCEEEESC
T ss_pred HHHHHHHHHC----CCeEEEEeCCCcHHHHHHHHHcCCceeecCC
Confidence 4788888874 5789999998776665556678888887543
No 382
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=51.22 E-value=59 Score=27.31 Aligned_cols=103 Identities=13% Similarity=0.227 Sum_probs=54.7
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhc-CCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKT-SSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~-~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
..+++|.||.--..-+......|.. .+++++ +++...+..... .+. + -+..|
T Consensus 5 ~~~~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~---~~~----------------~-~~~~~------ 58 (364)
T 3e82_A 5 NNTINIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRD---LPD----------------V-TVIAS------ 58 (364)
T ss_dssp --CEEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHH---CTT----------------S-EEESC------
T ss_pred CCcceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhh---CCC----------------C-cEECC------
Confidence 3468999999877666534444544 478776 444333322211 011 0 12222
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHH
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPH 149 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~ 149 (241)
--+++ .. +++-+|+++.. ...+.+..|+++|..=|+-||+ +.++..+++..
T Consensus 59 -~~~ll----~~---~~~D~V~i~tp~~~H~~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~ 113 (364)
T 3e82_A 59 -PEAAV----QH---PDVDLVVIASPNATHAPLARLALNAGKHVVVDKPFTLDMQEARELIAL 113 (364)
T ss_dssp -HHHHH----TC---TTCSEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHH
T ss_pred -HHHHh----cC---CCCCEEEEeCChHHHHHHHHHHHHCCCcEEEeCCCcCCHHHHHHHHHH
Confidence 12222 21 13444444433 3456677899999999999997 45565555443
No 383
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=51.01 E-value=33 Score=28.97 Aligned_cols=105 Identities=17% Similarity=0.186 Sum_probs=57.2
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECC-HHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDS-GSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~-~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
.+++|.||.-...-...+...+...+++++ +++. .+.+-++..... . .-+..|
T Consensus 25 ~~irvgiiG~G~~~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~~-~-----------------~~~~~~------- 79 (361)
T 3u3x_A 25 DELRFAAVGLNHNHIYGQVNCLLRAGARLAGFHEKDDALAAEFSAVYA-D-----------------ARRIAT------- 79 (361)
T ss_dssp -CCEEEEECCCSTTHHHHHHHHHHTTCEEEEEECSCHHHHHHHHHHSS-S-----------------CCEESC-------
T ss_pred cCcEEEEECcCHHHHHHHHHHhhcCCcEEEEEEcCCHHHHHHHHHHcC-C-----------------CcccCC-------
Confidence 358999999664443444455555788876 4443 333333332210 0 012222
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
--+++ .. +++-+|+++.. .-.+.+..|+++|..=|+-||+ +.++..+++...
T Consensus 80 ~~~ll----~~---~~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a 135 (361)
T 3u3x_A 80 AEEIL----ED---ENIGLIVSAAVSSERAELAIRAMQHGKDVLVDKPGMTSFDQLAKLRRVQ 135 (361)
T ss_dssp HHHHH----TC---TTCCEEEECCCHHHHHHHHHHHHHTTCEEEEESCSCSSHHHHHHHHHHH
T ss_pred HHHHh----cC---CCCCEEEEeCChHHHHHHHHHHHHCCCeEEEeCCCCCCHHHHHHHHHHH
Confidence 12222 22 13445555443 2356678899999999999996 566666655443
No 384
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=50.95 E-value=68 Score=24.35 Aligned_cols=71 Identities=10% Similarity=0.021 Sum_probs=46.2
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCE--EE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQ--VT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~--v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
..+|..||-++......+..++..|+. +. ...+..+.+..+.... ....||+|++|...+ +
T Consensus 89 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~--------------~~~~fD~v~~~~~~~--~ 152 (225)
T 3tr6_A 89 DGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAG--------------QAWQYDLIYIDADKA--N 152 (225)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTT--------------CTTCEEEEEECSCGG--G
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhcc--------------CCCCccEEEECCCHH--H
Confidence 578999999999999888888877652 54 4567766665542110 014589999987432 2
Q ss_pred HHHHHHHHHh
Q 026239 92 GYDLLKKIKE 101 (241)
Q Consensus 92 g~~ll~~ir~ 101 (241)
-..+++.+..
T Consensus 153 ~~~~l~~~~~ 162 (225)
T 3tr6_A 153 TDLYYEESLK 162 (225)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3445555543
No 385
>1req_B Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 1e1c_B* 2req_B* 3req_B* 4req_B* 5req_B* 6req_B* 7req_B*
Probab=50.94 E-value=23 Score=32.82 Aligned_cols=92 Identities=8% Similarity=0.056 Sum_probs=55.7
Q ss_pred HHHHHHHhhcCCCEEEEE---CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC-CC-HHHHHHHHHhc
Q 026239 28 RKLIERLLKTSSYQVTTV---DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG-MT-GYDLLKKIKES 102 (241)
Q Consensus 28 ~~~l~~~L~~~g~~v~~~---~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~-~~-g~~ll~~ir~~ 102 (241)
.+.+..+|...||+|... .+ ++..+...... +|+|.+...+.. +. .-++++.|++.
T Consensus 527 a~~va~~l~~aGfeVi~~g~~~t-ee~v~aa~e~~------------------adiv~lSsl~~~~~~~~~~v~~~Lk~a 587 (637)
T 1req_B 527 EGFSSPVWHIAGIDTPQVEGGTT-AEIVEAFKKSG------------------AQVADLCSSAKVYAQQGLEVAKALKAA 587 (637)
T ss_dssp HHHHHHHHHHTTCBCCEEECCCH-HHHHHHHHHHT------------------CSEEEEECCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCeeEEeCCCCCC-HHHHHHHHhcC------------------CCEEEEecccHHHHHHHHHHHHHHHhC
Confidence 356777889999998743 34 77777765443 447776543321 11 24677788876
Q ss_pred CCCCCCcEEEEccCCChH--HHHHHHHhcccccccCCCCHHHH
Q 026239 103 SSLRDIPVVIMSSENVPS--RISRCLEEGAEEFFLKPVRLSDL 143 (241)
Q Consensus 103 ~~~~~ipvIils~~~~~~--~~~~~l~~Ga~~~l~KP~~~~~L 143 (241)
+. ..|++.+..... ......+ |+++|+.--.+..++
T Consensus 588 G~----~~V~vgG~P~~d~~~~~~~~~-G~D~~~~~g~~~~~~ 625 (637)
T 1req_B 588 GA----KALYLSGAFKEFGDDAAEAEK-LIDGRLFMGMDVVDT 625 (637)
T ss_dssp TC----SEEEEESCGGGGGGGHHHHHH-HCCCEECTTCCHHHH
T ss_pred CC----CeEEEeCCCCccchhhHHHHh-ccceEecCCcCHHHH
Confidence 53 334566543221 1334445 999999877776654
No 386
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=50.88 E-value=95 Score=26.46 Aligned_cols=84 Identities=12% Similarity=0.160 Sum_probs=51.2
Q ss_pred HHHHhhcCCCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeC--C------CCCCCHHHHHHHHH
Q 026239 31 IERLLKTSSYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDY--C------MPGMTGYDLLKKIK 100 (241)
Q Consensus 31 l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~--~------mp~~~g~~ll~~ir 100 (241)
+..+.+..+..|. .+.+.++|..++. ..+|.|++.. + -.+...++.+..++
T Consensus 203 i~~l~~~~~~pvi~ggi~t~e~a~~~~~-------------------~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~ 263 (393)
T 2qr6_A 203 LKEFIGSLDVPVIAGGVNDYTTALHMMR-------------------TGAVGIIVGGGENTNSLALGMEVSMATAIADVA 263 (393)
T ss_dssp HHHHHHHCSSCEEEECCCSHHHHHHHHT-------------------TTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHH
T ss_pred HHHHHHhcCCCEEECCcCCHHHHHHHHH-------------------cCCCEEEECCCcccccccCCCCCChHHHHHHHH
Confidence 4444454454444 3567777766653 2355777743 0 01244556665554
Q ss_pred hc-------CCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 101 ES-------SSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 101 ~~-------~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
.. ...+++|||+-.+-.+...+.+++.+||+.+
T Consensus 264 ~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V 303 (393)
T 2qr6_A 264 AARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAV 303 (393)
T ss_dssp HHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEE
Confidence 43 1101389998888888999999999999876
No 387
>4gnr_A ABC transporter substrate-binding protein-branche amino acid transport; amino acid-binding protein, surface-exposed protein; HET: MLY; 1.00A {Streptococcus pneumoniae}
Probab=50.68 E-value=98 Score=25.16 Aligned_cols=88 Identities=11% Similarity=0.013 Sum_probs=51.4
Q ss_pred ceEEEEeCCHHHHHH-HHHHhhcCCCEEEE---E----CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC
Q 026239 16 FHVLAVDDSIIDRKL-IERLLKTSSYQVTT---V----DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM 87 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~-l~~~L~~~g~~v~~---~----~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m 87 (241)
..+++.+++...... ...+.+..|.+++. + .|....+..+.... +|+|++- .
T Consensus 145 ~~~~~~~~~~~yg~~~~~~~~~~~g~~vv~~~~~~~~~~d~~~~l~~i~~~~------------------~d~v~~~--~ 204 (353)
T 4gnr_A 145 KVVLYTDNASDYAKGIAKSFRESYKGEIVADETFVAGDTDFQAALTKMKGKD------------------FDAIVVP--G 204 (353)
T ss_dssp EEEEEEETTCHHHHHHHHHHHHHCCSEEEEEEEECTTCCCCHHHHHHHHTSC------------------CSEEECC--S
T ss_pred EEEEEEcCchHHHHHHHHHHHHHcCCEEEEEEeeCCCCCCHHHHHHHHHhcC------------------CCEEEEe--c
Confidence 345556654444443 44444556766542 2 34566677775544 4488863 3
Q ss_pred CCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHH
Q 026239 88 PGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRC 125 (241)
Q Consensus 88 p~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~ 125 (241)
...++..+++.+++... +.|++...+.........+
T Consensus 205 ~~~~~~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~ 240 (353)
T 4gnr_A 205 YYNEAGKIVNQARGMGI--DKPIVGGDGFNGEEFVQQA 240 (353)
T ss_dssp CHHHHHHHHHHHHHTTC--CSCEEECGGGCSHHHHHHH
T ss_pred CcHHHHHHHHHHHHcCC--CCcEEEecccccchhhhhh
Confidence 34467778888888764 6777766666666555444
No 388
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=50.64 E-value=19 Score=29.88 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=27.9
Q ss_pred CCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHH
Q 026239 107 DIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPH 149 (241)
Q Consensus 107 ~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~ 149 (241)
++-+|+++.. ...+.+..|+++|..=|+-||+ +.++..+++..
T Consensus 67 ~~D~V~i~tp~~~h~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~ 113 (329)
T 3evn_A 67 SIDVIYVATINQDHYKVAKAALLAGKHVLVEKPFTLTYDQANELFAL 113 (329)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHH
T ss_pred CCCEEEECCCcHHHHHHHHHHHHCCCeEEEccCCcCCHHHHHHHHHH
Confidence 3444544433 3455677899999999999996 45666555443
No 389
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=50.53 E-value=78 Score=23.80 Aligned_cols=66 Identities=15% Similarity=0.238 Sum_probs=43.1
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCC--EEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSY--QVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
..+|..||-++......+..+...|+ .+. ...+..+.+..+ .. ||+|++|... .+
T Consensus 81 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-------------------~~-fD~v~~~~~~--~~ 138 (210)
T 3c3p_A 81 SSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ-------------------RD-IDILFMDCDV--FN 138 (210)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTC-------------------CS-EEEEEEETTT--SC
T ss_pred CCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccC-------------------CC-CCEEEEcCCh--hh
Confidence 46899999999888888887776654 244 445555443211 23 8899999543 34
Q ss_pred HHHHHHHHHhc
Q 026239 92 GYDLLKKIKES 102 (241)
Q Consensus 92 g~~ll~~ir~~ 102 (241)
-..+++.+...
T Consensus 139 ~~~~l~~~~~~ 149 (210)
T 3c3p_A 139 GADVLERMNRC 149 (210)
T ss_dssp HHHHHHHHGGG
T ss_pred hHHHHHHHHHh
Confidence 55677777653
No 390
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=50.46 E-value=54 Score=27.56 Aligned_cols=42 Identities=21% Similarity=0.163 Sum_probs=28.9
Q ss_pred cCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhc
Q 026239 13 ESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLG 56 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~ 56 (241)
..+++|+|+.- ..+...+...|.. .+.|+.++-..+.++.+.
T Consensus 14 g~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~ 55 (365)
T 3abi_A 14 GRHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK 55 (365)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT
T ss_pred CCccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh
Confidence 34689999987 6667777777865 578887765555566553
No 391
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=50.42 E-value=34 Score=27.29 Aligned_cols=17 Identities=18% Similarity=0.143 Sum_probs=10.6
Q ss_pred HHHHHHhhcCCCEEEEE
Q 026239 29 KLIERLLKTSSYQVTTV 45 (241)
Q Consensus 29 ~~l~~~L~~~g~~v~~~ 45 (241)
..+...++..||.+..+
T Consensus 31 ~gi~~~a~~~g~~~~~~ 47 (289)
T 3k9c_A 31 EQIYAAATRRGYDVMLS 47 (289)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCEEEEE
Confidence 44555566778877654
No 392
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=50.24 E-value=12 Score=27.89 Aligned_cols=71 Identities=14% Similarity=0.297 Sum_probs=43.5
Q ss_pred ccEEEEeCCCCC-CCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcc---cccccCCCCHHHHHHhhHHHHHH
Q 026239 78 VNLVITDYCMPG-MTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGA---EEFFLKPVRLSDLNKLKPHLMKT 153 (241)
Q Consensus 78 ~dlIilD~~mp~-~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga---~~~l~KP~~~~~L~~~~~~l~~~ 153 (241)
.|+||..+.-|+ .+++++--.... ..||+++...... ....++-.|. ..|..+.+...+|.+++...++.
T Consensus 69 aD~vvA~l~~~d~Gt~~EiG~A~al-----gkPV~~l~~~~~~-~~ls~mi~G~~~~~~~~~~~Y~~~el~~il~~f~~~ 142 (152)
T 4fyk_A 69 ADVVVAEVTQPSLGVGYELGRAVAL-----GKPILCLFRPQSG-RVLSAMIRGAADGSRFQVWDYAEGEVETMLDRYFEA 142 (152)
T ss_dssp CSEEEEECSSCCHHHHHHHHHHHHT-----TCCEEEEECGGGS-CCCCHHHHHHCCSSSEEEEECCTTCHHHHHHHHHC-
T ss_pred CCEEEEeCCCCCCCHHHHHHHHHHc-----CCeEEEEEeCCcc-chhHHHHcCCCCCCeEEEEEecHHHHHHHHHHHHHh
Confidence 479999888665 356777665543 6799997653311 1122333444 34788888778887777766554
Q ss_pred H
Q 026239 154 K 154 (241)
Q Consensus 154 ~ 154 (241)
.
T Consensus 143 ~ 143 (152)
T 4fyk_A 143 Y 143 (152)
T ss_dssp -
T ss_pred h
Confidence 4
No 393
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=50.21 E-value=30 Score=27.71 Aligned_cols=56 Identities=9% Similarity=0.224 Sum_probs=42.7
Q ss_pred ccEEEEeCCCCCCCH-HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCC
Q 026239 78 VNLVITDYCMPGMTG-YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPV 138 (241)
Q Consensus 78 ~dlIilD~~mp~~~g-~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~ 138 (241)
..+|-++. .|..| .++++++|+... ++|+++=-+-.+++.+..+.+ |||+.+.-..
T Consensus 160 ~~~vY~e~--sG~~g~~~~v~~ir~~~~--~~pv~vGfGI~~~e~a~~~~~-gAD~VVVGSa 216 (235)
T 3w01_A 160 LPVMYIEY--SGIYGDVSKVQAVSEHLT--ETQLFYGGGISSEQQATEMAA-IADTIIVGDI 216 (235)
T ss_dssp CSEEEEEC--TTSCCCHHHHHHHHTTCS--SSEEEEESCCCSHHHHHHHHT-TSSEEEECTH
T ss_pred CCEEEEec--CCCcCCHHHHHHHHHhcC--CCCEEEECCcCCHHHHHHHHc-CCCEEEECCc
Confidence 35888888 45554 889999998542 689988777788888877766 9999987653
No 394
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=49.98 E-value=15 Score=28.67 Aligned_cols=26 Identities=15% Similarity=0.173 Sum_probs=23.1
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSY 40 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~ 40 (241)
.-+|.-||.|+......+..|+..|+
T Consensus 51 ~g~VvtvE~d~~~~~~ar~~l~~~g~ 76 (202)
T 3cvo_A 51 GKHVTSVESDRAWARMMKAWLAANPP 76 (202)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHSCC
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCC
Confidence 47899999999999999999998876
No 395
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=49.98 E-value=22 Score=29.35 Aligned_cols=39 Identities=10% Similarity=-0.078 Sum_probs=33.4
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
+++++.+++.. +++|||...+-.+.+.+.+++.+||+.+
T Consensus 232 ~~~i~~v~~~~--~~ipvi~~GGI~~~~da~~~l~~GAd~V 270 (314)
T 2e6f_A 232 LANVNAFYRRC--PDKLVFGCGGVYSGEDAFLHILAGASMV 270 (314)
T ss_dssp HHHHHHHHHHC--TTSEEEEESSCCSHHHHHHHHHHTCSSE
T ss_pred HHHHHHHHHhc--CCCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 68888888764 3799999998888999999999999866
No 396
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=49.95 E-value=79 Score=27.24 Aligned_cols=78 Identities=13% Similarity=0.050 Sum_probs=48.6
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCE---EE-EECCHHHHHH-HhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQ---VT-TVDSGSKALE-FLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~---v~-~~~~~~~al~-~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~ 90 (241)
-+|..||-++...+.+++-++..|.. +. ...|..+.+. .+ ...||+|++|- ++.
T Consensus 78 ~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~-------------------~~~fD~V~lDP--~g~ 136 (392)
T 3axs_A 78 EKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW-------------------GFGFDYVDLDP--FGT 136 (392)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC-------------------SSCEEEEEECC--SSC
T ss_pred CEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh-------------------CCCCcEEEECC--CcC
Confidence 57999999999999999999888763 55 4455555543 22 12488999997 333
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEccCC
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSSEN 117 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~~~ 117 (241)
. .+++......-. .--++++|...
T Consensus 137 ~-~~~l~~a~~~Lk--~gGll~~t~t~ 160 (392)
T 3axs_A 137 P-VPFIESVALSMK--RGGILSLTATD 160 (392)
T ss_dssp C-HHHHHHHHHHEE--EEEEEEEEECC
T ss_pred H-HHHHHHHHHHhC--CCCEEEEEecc
Confidence 2 245554433111 22366666533
No 397
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=49.86 E-value=70 Score=25.17 Aligned_cols=57 Identities=7% Similarity=0.113 Sum_probs=35.0
Q ss_pred ccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCC
Q 026239 78 VNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVR 139 (241)
Q Consensus 78 ~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~ 139 (241)
+++|=+. +...++.+.++.+++..+ ++-+-.=| --+.+.+..|+++||+..+.--++
T Consensus 43 v~~iel~--~k~~~~~~~i~~l~~~~~--~l~vgaGt-vl~~d~~~~A~~aGAd~v~~p~~d 99 (224)
T 1vhc_A 43 LSVAEIT--FRSEAAADAIRLLRANRP--DFLIAAGT-VLTAEQVVLAKSSGADFVVTPGLN 99 (224)
T ss_dssp CCEEEEE--TTSTTHHHHHHHHHHHCT--TCEEEEES-CCSHHHHHHHHHHTCSEEECSSCC
T ss_pred CCEEEEe--ccCchHHHHHHHHHHhCc--CcEEeeCc-EeeHHHHHHHHHCCCCEEEECCCC
Confidence 4455444 445678888988887643 43332222 336678888999999765543333
No 398
>1fy2_A Aspartyl dipeptidase; serine protease, catalytic triad, strand-helix MO hydrolase; 1.20A {Salmonella typhimurium} SCOP: c.23.16.4 PDB: 1fye_A
Probab=49.77 E-value=85 Score=24.61 Aligned_cols=62 Identities=18% Similarity=0.180 Sum_probs=41.6
Q ss_pred CcceEEEEeCCH------HHHHHHHHHhhcCCCEEEEEC---CHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEe
Q 026239 14 SQFHVLAVDDSI------IDRKLIERLLKTSSYQVTTVD---SGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITD 84 (241)
Q Consensus 14 ~~~~ILiVdd~~------~~~~~l~~~L~~~g~~v~~~~---~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD 84 (241)
...+|++|+-.. .....+.+.|+..|+++..+. +..+.+.. .|.||+
T Consensus 30 ~~~~i~iI~~a~~~~~~~~~~~~~~~al~~lG~~~~~v~~~~d~~~~l~~-----------------------ad~I~l- 85 (229)
T 1fy2_A 30 GRRSAVFIPFAGVTQTWDEYTDKTAEVLAPLGVNVTGIHRVADPLAAIEK-----------------------AEIIIV- 85 (229)
T ss_dssp TCCEEEEECTTCCSSCHHHHHHHHHHHHGGGTCEEEETTSSSCHHHHHHH-----------------------CSEEEE-
T ss_pred CCCeEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEeccccHHHHHhc-----------------------CCEEEE-
Confidence 457899998542 556667888899999888773 33333332 347765
Q ss_pred CCCCCCCHHHHHHHHHhc
Q 026239 85 YCMPGMTGYDLLKKIKES 102 (241)
Q Consensus 85 ~~mp~~~g~~ll~~ir~~ 102 (241)
||.+-..+++.++..
T Consensus 86 ---pGG~~~~~~~~l~~~ 100 (229)
T 1fy2_A 86 ---GGGNTFQLLKESRER 100 (229)
T ss_dssp ---CCSCHHHHHHHHHHT
T ss_pred ---CCCcHHHHHHHHHHC
Confidence 677777777776653
No 399
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=49.70 E-value=64 Score=27.80 Aligned_cols=57 Identities=11% Similarity=0.075 Sum_probs=33.5
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCC------CE---EE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeC
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSS------YQ---VT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDY 85 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g------~~---v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~ 85 (241)
-+|-+||=|+.+.+..++.|.... .. +. .+.|+.+.++.... ....||+||+|+
T Consensus 229 ~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~----------------~~~~yDvIIvDl 292 (381)
T 3c6k_A 229 KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAK----------------EGREFDYVINDL 292 (381)
T ss_dssp SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHH----------------HTCCEEEEEEEC
T ss_pred ceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhh----------------ccCceeEEEECC
Confidence 467777777777777777664210 11 32 45666666554321 123589999997
Q ss_pred CCC
Q 026239 86 CMP 88 (241)
Q Consensus 86 ~mp 88 (241)
.-+
T Consensus 293 ~D~ 295 (381)
T 3c6k_A 293 TAV 295 (381)
T ss_dssp CSS
T ss_pred CCC
Confidence 543
No 400
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=49.60 E-value=1e+02 Score=24.91 Aligned_cols=20 Identities=15% Similarity=0.189 Sum_probs=12.8
Q ss_pred HHHHHHHHhhcCCCEEEEEC
Q 026239 27 DRKLIERLLKTSSYQVTTVD 46 (241)
Q Consensus 27 ~~~~l~~~L~~~g~~v~~~~ 46 (241)
+...+...+...||.+..+.
T Consensus 78 ~~~gi~~~a~~~g~~~~~~~ 97 (332)
T 2hsg_A 78 LARGIEDIATMYKYNIILSN 97 (332)
T ss_dssp HHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEEe
Confidence 34455666677788877654
No 401
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=49.57 E-value=38 Score=29.05 Aligned_cols=90 Identities=20% Similarity=0.184 Sum_probs=57.6
Q ss_pred HHHHHHHHhhcCCCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC-----CCCCHHHHHHHH
Q 026239 27 DRKLIERLLKTSSYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM-----PGMTGYDLLKKI 99 (241)
Q Consensus 27 ~~~~l~~~L~~~g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m-----p~~~g~~ll~~i 99 (241)
..+.++.+-+..+.-|. .+.+.++|..++.. .+|.|++.-.- .+...++++..+
T Consensus 213 ~~~~i~~i~~~~~~Pv~vkgv~t~e~a~~a~~a-------------------Gad~I~vs~~gg~~~d~~~~~~~~l~~v 273 (380)
T 1p4c_A 213 NWEALRWLRDLWPHKLLVKGLLSAEDADRCIAE-------------------GADGVILSNHGGRQLDCAISPMEVLAQS 273 (380)
T ss_dssp CHHHHHHHHHHCCSEEEEEEECCHHHHHHHHHT-------------------TCSEEEECCGGGTSCTTCCCGGGTHHHH
T ss_pred cHHHHHHHHHhcCCCEEEEecCcHHHHHHHHHc-------------------CCCEEEEcCCCCCcCCCCcCHHHHHHHH
Confidence 34566666665565444 46788888776642 34566663210 012236677888
Q ss_pred HhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc-CCC
Q 026239 100 KESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL-KPV 138 (241)
Q Consensus 100 r~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~-KP~ 138 (241)
+... .+|||.-.+-.....+.+++.+||+.+.. +|+
T Consensus 274 ~~~~---~~pVia~GGI~~~~dv~kal~~GAdaV~iGr~~ 310 (380)
T 1p4c_A 274 VAKT---GKPVLIDSGFRRGSDIVKALALGAEAVLLGRAT 310 (380)
T ss_dssp HHHH---CSCEEECSSCCSHHHHHHHHHTTCSCEEESHHH
T ss_pred HHHc---CCeEEEECCCCCHHHHHHHHHhCCcHhhehHHH
Confidence 7643 35999888888888999999999998744 444
No 402
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=49.56 E-value=28 Score=29.31 Aligned_cols=53 Identities=13% Similarity=0.222 Sum_probs=40.3
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPH 149 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~ 149 (241)
.+.++.+|+..+ ..+|++.... .+.+.+++++|++...+..+++++|.+++..
T Consensus 219 ~~Av~~ar~~~p--~~kIeVEVdt--ldea~eAl~aGaD~I~LDn~~~~~l~~av~~ 271 (320)
T 3paj_A 219 RQAISTAKQLNP--GKPVEVETET--LAELEEAISAGADIIMLDNFSLEMMREAVKI 271 (320)
T ss_dssp HHHHHHHHHHST--TSCEEEEESS--HHHHHHHHHTTCSEEEEESCCHHHHHHHHHH
T ss_pred HHHHHHHHHhCC--CCeEEEEECC--HHHHHHHHHcCCCEEEECCCCHHHHHHHHHH
Confidence 466777887655 5677776543 4677889999999999999999998776644
No 403
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=49.56 E-value=67 Score=25.31 Aligned_cols=66 Identities=12% Similarity=0.063 Sum_probs=37.6
Q ss_pred HHHHHHHhhcCCCEEEEECC---HH---HHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHHHh
Q 026239 28 RKLIERLLKTSSYQVTTVDS---GS---KALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKIKE 101 (241)
Q Consensus 28 ~~~l~~~L~~~g~~v~~~~~---~~---~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~ir~ 101 (241)
...+...++..||.+..+.+ .. +.++.+.... +|.||+-...+. .-.++++.+..
T Consensus 27 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~------------------vdgiI~~~~~~~-~~~~~~~~~~~ 87 (293)
T 3l6u_A 27 INAFKAEAKANKYEALVATSQNSRISEREQILEFVHLK------------------VDAIFITTLDDV-YIGSAIEEAKK 87 (293)
T ss_dssp HHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHHHTT------------------CSEEEEECSCTT-TTHHHHHHHHH
T ss_pred HHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcC------------------CCEEEEecCChH-HHHHHHHHHHH
Confidence 44566667788998876543 22 3444443333 456666432222 12366777775
Q ss_pred cCCCCCCcEEEEccC
Q 026239 102 SSSLRDIPVVIMSSE 116 (241)
Q Consensus 102 ~~~~~~ipvIils~~ 116 (241)
. .+|||++...
T Consensus 88 ~----~iPvV~~~~~ 98 (293)
T 3l6u_A 88 A----GIPVFAIDRM 98 (293)
T ss_dssp T----TCCEEEESSC
T ss_pred c----CCCEEEecCC
Confidence 3 6899988654
No 404
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=49.29 E-value=37 Score=26.43 Aligned_cols=85 Identities=7% Similarity=0.025 Sum_probs=49.8
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHH----hcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEF----LGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~----l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
...+|||..-...+-..+.+.|...|+.|..++...+.++. +.... ...+.++.+|++..+
T Consensus 13 ~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------------~~~~~~~~~d~d~~~ 77 (247)
T 3i1j_A 13 KGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAG---------------QPQPLIIALNLENAT 77 (247)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT---------------SCCCEEEECCTTTCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcC---------------CCCceEEEeccccCC
Confidence 45678999988888888888888889998865433333322 22111 012335666665555
Q ss_pred CCHH-HHHHHHHhcCCCCCCcEEEEcc
Q 026239 90 MTGY-DLLKKIKESSSLRDIPVVIMSS 115 (241)
Q Consensus 90 ~~g~-~ll~~ir~~~~~~~ipvIils~ 115 (241)
.+.+ .+++.+.+... .+-++|..+
T Consensus 78 ~~~~~~~~~~~~~~~g--~id~lv~nA 102 (247)
T 3i1j_A 78 AQQYRELAARVEHEFG--RLDGLLHNA 102 (247)
T ss_dssp HHHHHHHHHHHHHHHS--CCSEEEECC
T ss_pred HHHHHHHHHHHHHhCC--CCCEEEECC
Confidence 4433 45566655432 556666544
No 405
>3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0
Probab=49.07 E-value=71 Score=25.23 Aligned_cols=31 Identities=16% Similarity=0.165 Sum_probs=26.2
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEEC
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVD 46 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~ 46 (241)
++|||..-...+...+...|...|+.|+.+.
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~ 36 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFD 36 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEEC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEec
Confidence 5899999988888888888888899988654
No 406
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=49.06 E-value=96 Score=26.42 Aligned_cols=77 Identities=13% Similarity=0.074 Sum_probs=47.3
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcC---------------CCE-EE-EECCHHHHHHHhcccCCCCCCCCCCCCCCccccc
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTS---------------SYQ-VT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVG 77 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~---------------g~~-v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~ 77 (241)
..+|+.+|-++...+.+++-++.. |.. +. ...|..+.+... ...
T Consensus 71 ~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~-------------------~~~ 131 (378)
T 2dul_A 71 AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAER-------------------HRY 131 (378)
T ss_dssp CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHS-------------------TTC
T ss_pred CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHhc-------------------cCC
Confidence 357999999999999998888766 643 44 456666655432 124
Q ss_pred ccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEcc
Q 026239 78 VNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSS 115 (241)
Q Consensus 78 ~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~ 115 (241)
||+|++|- |+ +..+++........ .--++++|.
T Consensus 132 fD~I~lDP--~~-~~~~~l~~a~~~lk--~gG~l~vt~ 164 (378)
T 2dul_A 132 FHFIDLDP--FG-SPMEFLDTALRSAK--RRGILGVTA 164 (378)
T ss_dssp EEEEEECC--SS-CCHHHHHHHHHHEE--EEEEEEEEE
T ss_pred CCEEEeCC--CC-CHHHHHHHHHHhcC--CCCEEEEEe
Confidence 88999884 33 33455554432211 122566665
No 407
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=49.01 E-value=14 Score=29.31 Aligned_cols=39 Identities=10% Similarity=0.035 Sum_probs=32.7
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
+++++.|+ .. ++||++..+-.+.+.+..+++.||+.++.
T Consensus 63 ~~~i~~i~-~~---~ipvi~~Ggi~~~~~~~~~~~~Gad~V~l 101 (241)
T 1qo2_A 63 LPVLEKLS-EF---AEHIQIGGGIRSLDYAEKLRKLGYRRQIV 101 (241)
T ss_dssp HHHHHHGG-GG---GGGEEEESSCCSHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHH-hc---CCcEEEECCCCCHHHHHHHHHCCCCEEEE
Confidence 67788887 42 79999999999999999999999987754
No 408
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=48.93 E-value=67 Score=24.35 Aligned_cols=64 Identities=11% Similarity=0.009 Sum_probs=37.8
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCE--EE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQ--VT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~--v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
..+|..||-++......+..++..|.. +. ...+..+.+. ....||+|+++..+ +
T Consensus 77 ~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~--------------------~~~~~D~v~~~~~~---~ 133 (204)
T 3njr_A 77 GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALA--------------------DLPLPEAVFIGGGG---S 133 (204)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGT--------------------TSCCCSEEEECSCC---C
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcc--------------------cCCCCCEEEECCcc---c
Confidence 567888888887777777776665543 43 2333333211 11247899988743 3
Q ss_pred HHHHHHHHHhc
Q 026239 92 GYDLLKKIKES 102 (241)
Q Consensus 92 g~~ll~~ir~~ 102 (241)
-. +++.+...
T Consensus 134 ~~-~l~~~~~~ 143 (204)
T 3njr_A 134 QA-LYDRLWEW 143 (204)
T ss_dssp HH-HHHHHHHH
T ss_pred HH-HHHHHHHh
Confidence 33 67776654
No 409
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=48.88 E-value=52 Score=26.53 Aligned_cols=69 Identities=16% Similarity=0.088 Sum_probs=40.0
Q ss_pred cceEEEEeCCHHHHHHHHHHhhc----C-CCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKT----S-SYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMP 88 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~----~-g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp 88 (241)
..+|.+||-++...+..++.+.. . .-.+. ...|+.+.+... ...||+||+|...|
T Consensus 99 ~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-------------------~~~fD~Ii~d~~~~ 159 (275)
T 1iy9_A 99 VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS-------------------ENQYDVIMVDSTEP 159 (275)
T ss_dssp CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC-------------------CSCEEEEEESCSSC
T ss_pred CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-------------------CCCeeEEEECCCCC
Confidence 35788888888887777776632 1 11233 445555443321 23589999998655
Q ss_pred CCC-----HHHHHHHHHhc
Q 026239 89 GMT-----GYDLLKKIKES 102 (241)
Q Consensus 89 ~~~-----g~~ll~~ir~~ 102 (241)
... ..++++.++..
T Consensus 160 ~~~~~~l~~~~~~~~~~~~ 178 (275)
T 1iy9_A 160 VGPAVNLFTKGFYAGIAKA 178 (275)
T ss_dssp CSCCCCCSTTHHHHHHHHH
T ss_pred CCcchhhhHHHHHHHHHHh
Confidence 321 24566666543
No 410
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=48.75 E-value=68 Score=26.56 Aligned_cols=49 Identities=12% Similarity=0.187 Sum_probs=35.7
Q ss_pred cccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 77 GVNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 77 ~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.+|+|.+....| .++++.++.. .++|+... .....+..+.+.|++.++.
T Consensus 96 g~d~V~~~~g~p----~~~~~~l~~~----gi~vi~~v--~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 96 GIRVVETAGNDP----GEHIAEFRRH----GVKVIHKC--TAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp TCCEEEEEESCC----HHHHHHHHHT----TCEEEEEE--SSHHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEcCCCc----HHHHHHHHHc----CCCEEeeC--CCHHHHHHHHHcCCCEEEE
Confidence 355898887665 5888999874 56777543 3456677888999988876
No 411
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=48.75 E-value=33 Score=26.04 Aligned_cols=35 Identities=11% Similarity=0.033 Sum_probs=24.4
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEEC-CHHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVD-SGSK 50 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~ 50 (241)
|+|||..-...+-..+.+.|...|+.|..+. +...
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~ 36 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQK 36 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 4688888877777777777766788887554 4433
No 412
>4f3h_A Fimxeal, putative uncharacterized protein; fimxeal-C-DI-GMP, type IV pilus, signaling protein; HET: C2E; 2.50A {Xanthomonas campestris PV} PDB: 4f48_A*
Probab=48.55 E-value=85 Score=24.58 Aligned_cols=89 Identities=12% Similarity=0.141 Sum_probs=54.1
Q ss_pred HHHhhcCCCEEE--EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC----CCC-CCHHHHHHHHHhcCC
Q 026239 32 ERLLKTSSYQVT--TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC----MPG-MTGYDLLKKIKESSS 104 (241)
Q Consensus 32 ~~~L~~~g~~v~--~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~----mp~-~~g~~ll~~ir~~~~ 104 (241)
-..|+..|+.+. -+.+|...+..+... ++|.|=+|-. +.. .....+++.|.....
T Consensus 149 l~~L~~~G~~ialDdfG~g~s~l~~L~~l------------------~~d~iKiD~~~v~~~~~~~~~~~~l~~i~~~a~ 210 (250)
T 4f3h_A 149 LASVSAMGCKVGLEQFGSGLDSFQLLAHF------------------QPAFLKLDRSITGDIASARESQEKIREITSRAQ 210 (250)
T ss_dssp HHHHHTTTCEEEEEEETSSTHHHHHHTTS------------------CCSEEEECHHHHTTTTTCSHHHHHHHHTHHHHH
T ss_pred HHHHHHCCCEEEEeCCCCCchHHHHHhhC------------------CCCEEEECHHHHHhHhcChhhHHHHHHHHHHHH
Confidence 345677888765 467888888888543 4568888832 222 234455555433221
Q ss_pred CCCCcEEEEccCCChHHHHHHHHhcccc----cccCCCC
Q 026239 105 LRDIPVVIMSSENVPSRISRCLEEGAEE----FFLKPVR 139 (241)
Q Consensus 105 ~~~ipvIils~~~~~~~~~~~l~~Ga~~----~l~KP~~ 139 (241)
..++.|| ..+-.+.+....+.+.|++. |+.||..
T Consensus 211 ~l~~~vi-aeGVEt~~~~~~l~~~G~~~~QG~~~~~P~p 248 (250)
T 4f3h_A 211 PTGILTV-AEFVADAQSMSSFFTAGVDYVQGDFVAPTGP 248 (250)
T ss_dssp HHTCEEE-ECCCCCHHHHHHHHHHTCSEECSTTTCCCBS
T ss_pred HcCCEEE-EeccCCHHHHHHHHHcCCCEEeeccccCCCC
Confidence 1144444 56666777788888999863 4677764
No 413
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=48.52 E-value=81 Score=25.21 Aligned_cols=19 Identities=16% Similarity=0.198 Sum_probs=10.9
Q ss_pred HHHHHHHHhhcCCCEEEEE
Q 026239 27 DRKLIERLLKTSSYQVTTV 45 (241)
Q Consensus 27 ~~~~l~~~L~~~g~~v~~~ 45 (241)
+...+...++..||.+..+
T Consensus 20 ~~~gi~~~a~~~g~~~~~~ 38 (313)
T 3m9w_A 20 DRDIFVKKAESLGAKVFVQ 38 (313)
T ss_dssp HHHHHHHHHHHTSCEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEE
Confidence 3444555566667766644
No 414
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=48.43 E-value=55 Score=27.11 Aligned_cols=68 Identities=12% Similarity=0.152 Sum_probs=36.0
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcC--CC---EEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTS--SY---QVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~--g~---~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
.+|..||-++......++.+... |+ .+. ...++.+.+... ...||+||+|...|.
T Consensus 133 ~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-------------------~~~fD~Ii~d~~~~~ 193 (314)
T 2b2c_A 133 EKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH-------------------KNEFDVIITDSSDPV 193 (314)
T ss_dssp CEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC-------------------TTCEEEEEECCC---
T ss_pred CEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc-------------------CCCceEEEEcCCCCC
Confidence 57777887777777777766532 21 233 344555444321 235899999985542
Q ss_pred CC--H---HHHHHHHHhc
Q 026239 90 MT--G---YDLLKKIKES 102 (241)
Q Consensus 90 ~~--g---~~ll~~ir~~ 102 (241)
.. + .++++.++..
T Consensus 194 ~~~~~l~t~~~l~~~~~~ 211 (314)
T 2b2c_A 194 GPAESLFGQSYYELLRDA 211 (314)
T ss_dssp ----------HHHHHHHH
T ss_pred CcchhhhHHHHHHHHHhh
Confidence 11 1 3566666543
No 415
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=48.40 E-value=99 Score=24.37 Aligned_cols=121 Identities=12% Similarity=0.114 Sum_probs=65.5
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCC--EEEEE-CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEe-------
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSY--QVTTV-DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITD------- 84 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~--~v~~~-~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD------- 84 (241)
+.+|+++-..+.+...++.++...+. .+..+ .+.++++........ ...+|+||.-
T Consensus 12 m~~ii~i~~~~~L~~~~~~i~~e~~~~~~I~vi~~~le~av~~a~~~~~--------------~~~~dVIISRGgta~~L 77 (225)
T 2pju_A 12 DKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIRKKLA--------------NERCDAIIAAGSNGAYL 77 (225)
T ss_dssp -CCEEEEECCHHHHHHHHHHHTTTTTTCEEEEECCCHHHHHHHHHHHTT--------------TSCCSEEEEEHHHHHHH
T ss_pred CCCEEEEEchHHHHHHHHHHHHhhCCCceEEEecCcHHHHHHHHHHHHh--------------cCCCeEEEeCChHHHHH
Confidence 45677777777778888888876553 44444 467778776543211 1125566642
Q ss_pred ---CCCC----CCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHH-hcccccccCC-CCHHHHHHhhHHHH
Q 026239 85 ---YCMP----GMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLE-EGAEEFFLKP-VRLSDLNKLKPHLM 151 (241)
Q Consensus 85 ---~~mp----~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~-~Ga~~~l~KP-~~~~~L~~~~~~l~ 151 (241)
+..| ..+|+|+++.|....... -+|-+++-.+........-+ .|.+ +-..+ .+.+++...+..+.
T Consensus 78 r~~~~iPVV~I~vs~~Dil~aL~~a~~~~-~kIavVg~~~~~~~~~~i~~ll~~~-i~~~~~~~~ee~~~~i~~l~ 151 (225)
T 2pju_A 78 KSRLSVPVILIKPSGYDVLQFLAKAGKLT-SSIGVVTYQETIPALVAFQKTFNLR-LDQRSYITEEDARGQINELK 151 (225)
T ss_dssp HTTCSSCEEEECCCHHHHHHHHHHTTCTT-SCEEEEEESSCCHHHHHHHHHHTCC-EEEEEESSHHHHHHHHHHHH
T ss_pred HhhCCCCEEEecCCHHHHHHHHHHHHhhC-CcEEEEeCchhhhHHHHHHHHhCCc-eEEEEeCCHHHHHHHHHHHH
Confidence 2233 468899998887655432 35555555443333222222 2332 22223 34566665555554
No 416
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=48.37 E-value=66 Score=27.24 Aligned_cols=43 Identities=14% Similarity=0.230 Sum_probs=27.3
Q ss_pred CcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 108 IPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 108 ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
+-+|+++.. ...+.+..|+++|..=|+-||+ +.++..+++...
T Consensus 65 vD~V~i~tp~~~H~~~~~~al~aGk~Vl~EKP~a~~~~e~~~l~~~a 111 (387)
T 3moi_A 65 MDAVYIASPHQFHCEHVVQASEQGLHIIVEKPLTLSRDEADRMIEAV 111 (387)
T ss_dssp CSEEEECSCGGGHHHHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCCcHHHHHHHHHHHHCCCceeeeCCccCCHHHHHHHHHHH
Confidence 344444433 2345677889999998999996 455655554443
No 417
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=48.35 E-value=25 Score=31.86 Aligned_cols=56 Identities=20% Similarity=0.338 Sum_probs=40.2
Q ss_pred cccccEEEEeCCCCCC-CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 75 EVGVNLVITDYCMPGM-TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 75 ~~~~dlIilD~~mp~~-~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
+..+|+|++|..-... .-++++++||...+ +++||+ ..-...+.....+++||+.+
T Consensus 291 ~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p--~~~via-GNVaT~e~a~~Li~aGAD~v 347 (556)
T 4af0_A 291 EAGLDVVVLDSSQGNSVYQIEFIKWIKQTYP--KIDVIA-GNVVTREQAAQLIAAGADGL 347 (556)
T ss_dssp HTTCCEEEECCSCCCSHHHHHHHHHHHHHCT--TSEEEE-EEECSHHHHHHHHHHTCSEE
T ss_pred hcCCcEEEEeccccccHHHHHHHHHHHhhCC--cceEEe-ccccCHHHHHHHHHcCCCEE
Confidence 3457899999876443 34789999998754 777764 33445667777889999876
No 418
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=48.12 E-value=38 Score=28.21 Aligned_cols=66 Identities=15% Similarity=0.116 Sum_probs=43.5
Q ss_pred EEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHH
Q 026239 42 VTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSR 121 (241)
Q Consensus 42 v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~ 121 (241)
.+.+++.+++.+.+.. .+|+|.+|-. +--++-+.++... .-..+..|+.-+.+.
T Consensus 211 eVEv~tl~e~~eAl~a-------------------GaDiImLDn~----s~~~l~~av~~~~---~~v~leaSGGIt~~~ 264 (300)
T 3l0g_A 211 AIECDNISQVEESLSN-------------------NVDMILLDNM----SISEIKKAVDIVN---GKSVLEVSGCVNIRN 264 (300)
T ss_dssp EEEESSHHHHHHHHHT-------------------TCSEEEEESC----CHHHHHHHHHHHT---TSSEEEEESSCCTTT
T ss_pred EEEECCHHHHHHHHHc-------------------CCCEEEECCC----CHHHHHHHHHhhc---CceEEEEECCCCHHH
Confidence 3478999999998853 3569999953 3323322233222 224666888888888
Q ss_pred HHHHHHhccccc
Q 026239 122 ISRCLEEGAEEF 133 (241)
Q Consensus 122 ~~~~l~~Ga~~~ 133 (241)
+....+.|+|.+
T Consensus 265 i~~~A~tGVD~I 276 (300)
T 3l0g_A 265 VRNIALTGVDYI 276 (300)
T ss_dssp HHHHHTTTCSEE
T ss_pred HHHHHHcCCCEE
Confidence 888888998644
No 419
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=48.08 E-value=57 Score=26.12 Aligned_cols=20 Identities=10% Similarity=-0.187 Sum_probs=12.6
Q ss_pred HHHHHHHHhhcCCCEEEEEC
Q 026239 27 DRKLIERLLKTSSYQVTTVD 46 (241)
Q Consensus 27 ~~~~l~~~L~~~g~~v~~~~ 46 (241)
+...+...++..||.+..+.
T Consensus 33 ~~~gi~~~a~~~g~~~~~~~ 52 (303)
T 3kke_A 33 MFSGVQMAASGHSTDVLLGQ 52 (303)
T ss_dssp HHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 34455666677788776543
No 420
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=47.97 E-value=68 Score=26.75 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=29.5
Q ss_pred CCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 107 DIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 107 ~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
++-+|+++.. .-.+.+..|+++|.+=|+-||+ +.++..+++...
T Consensus 94 ~iDaV~IatP~~~H~~~a~~al~aGkhVl~EKPla~~~~ea~~l~~~a 141 (393)
T 4fb5_A 94 EVDVVSVTTPNQFHAEMAIAALEAGKHVWCEKPMAPAYADAERMLATA 141 (393)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTCEEEECSCSCSSHHHHHHHHHHH
T ss_pred CCcEEEECCChHHHHHHHHHHHhcCCeEEEccCCcccHHHHHHhhhhH
Confidence 3444444433 3466788999999999999997 456665555443
No 421
>2yy8_A ATRM56, UPF0106 protein PH0461; DEEP trefoil knot, structural genomics, NPPSFA; HET: SAM MTA; 2.48A {Pyrococcus horikoshii}
Probab=47.84 E-value=20 Score=27.71 Aligned_cols=87 Identities=15% Similarity=0.200 Sum_probs=60.6
Q ss_pred cceEEEEeC-CHHHHHHHHHHhhcCC--CEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC
Q 026239 15 QFHVLAVDD-SIIDRKLIERLLKTSS--YQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT 91 (241)
Q Consensus 15 ~~~ILiVdd-~~~~~~~l~~~L~~~g--~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~ 91 (241)
.-+|++.++ |+...+.++.+.+++| |.+....+....+... .-+++-+.|=|.+
T Consensus 30 A~~iil~~~~D~~v~esv~dV~~rWGG~F~ve~~~~wk~~ik~w-----------------------gG~VVHLTMYG~~ 86 (201)
T 2yy8_A 30 ADGIIIASEEDEKVKESVEDVVKRWGGPFFIEFNRNWRKVMKEF-----------------------TGVKVHLTMYGLH 86 (201)
T ss_dssp CSEEEESSSCCHHHHHHHHHHHHHHCSCCBCCBCSCHHHHHHHC-----------------------CSEEEEEEEEEEE
T ss_pred CCeEEEcCCcChhHHHHHHHHHHhcCCceEEEECCCHHHHHHhc-----------------------CCEEEEEecCCCc
Confidence 357888888 9999999999999887 6677777777776644 1466777888888
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHH
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSENVPSRISR 124 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~ 124 (241)
--+++..|+.......--+|++.++..+..+-+
T Consensus 87 i~dvi~eIr~~~~~~~~iLVVVGaeKVP~evYe 119 (201)
T 2yy8_A 87 VDDVIEELKEKLKKGEDFMIIVGAEKVPREVYE 119 (201)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH
T ss_pred hHHHHHHHHhhcccCCCEEEEECCCcCCHHHHh
Confidence 888999998541101223445566666665543
No 422
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=47.57 E-value=1.1e+02 Score=27.21 Aligned_cols=28 Identities=21% Similarity=0.179 Sum_probs=24.1
Q ss_pred CCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 107 DIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 107 ~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
.+|||.=.+-.....+..|+.+||+...
T Consensus 352 ~ipvia~GGi~~~~di~kAlalGA~~V~ 379 (503)
T 1me8_A 352 YIPVCSDGGIVYDYHMTLALAMGADFIM 379 (503)
T ss_dssp ECCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred CceEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 5899887788889999999999999653
No 423
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=47.56 E-value=31 Score=24.91 Aligned_cols=40 Identities=20% Similarity=0.175 Sum_probs=25.0
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEF 54 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~ 54 (241)
...+|+|+.--.. ...+...|...|+.|+.++...+.++.
T Consensus 18 ~~~~v~IiG~G~i-G~~la~~L~~~g~~V~vid~~~~~~~~ 57 (155)
T 2g1u_A 18 KSKYIVIFGCGRL-GSLIANLASSSGHSVVVVDKNEYAFHR 57 (155)
T ss_dssp CCCEEEEECCSHH-HHHHHHHHHHTTCEEEEEESCGGGGGG
T ss_pred CCCcEEEECCCHH-HHHHHHHHHhCCCeEEEEECCHHHHHH
Confidence 4578888886544 445556666678888866544343333
No 424
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=47.35 E-value=22 Score=26.74 Aligned_cols=25 Identities=16% Similarity=0.211 Sum_probs=17.4
Q ss_pred HHHHHHHHHhhcCCCEEE---EECCHHH
Q 026239 26 IDRKLIERLLKTSSYQVT---TVDSGSK 50 (241)
Q Consensus 26 ~~~~~l~~~L~~~g~~v~---~~~~~~~ 50 (241)
.....|..+|...|+.|. ++.|..+
T Consensus 40 ~ng~~L~~~L~~~G~~v~~~~iV~Dd~~ 67 (178)
T 3iwt_A 40 ESGDIIKQLLIENGHKIIGYSLVPDDKI 67 (178)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEECSCHH
T ss_pred chHHHHHHHHHHCCCEEEEEEEeCCCHH
Confidence 345678999999999875 4555443
No 425
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=47.21 E-value=1.2e+02 Score=24.81 Aligned_cols=59 Identities=17% Similarity=0.196 Sum_probs=37.2
Q ss_pred ccEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 78 VNLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 78 ~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
.|++|+.. |.-+++.+.. .+|||+....... .+.++.| .+|+..+ +.++|...+..++.
T Consensus 283 ad~~v~~s------g~~~lEA~a~-----G~Pvi~~~~~~~~---~e~v~~g-~g~~v~~-d~~~la~~i~~ll~ 341 (375)
T 3beo_A 283 SYLMLTDS------GGVQEEAPSL-----GVPVLVLRDTTER---PEGIEAG-TLKLAGT-DEETIFSLADELLS 341 (375)
T ss_dssp CSEEEECC------HHHHHHHHHH-----TCCEEECSSCCSC---HHHHHTT-SEEECCS-CHHHHHHHHHHHHH
T ss_pred CcEEEECC------CChHHHHHhc-----CCCEEEecCCCCC---ceeecCC-ceEEcCC-CHHHHHHHHHHHHh
Confidence 35777653 4446666654 6789876321222 2345678 7888876 88998877777664
No 426
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=47.20 E-value=77 Score=26.31 Aligned_cols=86 Identities=14% Similarity=0.025 Sum_probs=48.2
Q ss_pred cceEEEEeCCHHH----HHHHHHHhhcCCCEEEE---E----CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEE
Q 026239 15 QFHVLAVDDSIID----RKLIERLLKTSSYQVTT---V----DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVIT 83 (241)
Q Consensus 15 ~~~ILiVdd~~~~----~~~l~~~L~~~g~~v~~---~----~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIil 83 (241)
.-+|.+|-++... ...+...|+..|..+.. + .+....+..+.... +|+||+
T Consensus 143 ~~~iaii~~~~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~~~d~~~~~~~l~~~~------------------~dav~~ 204 (392)
T 3lkb_A 143 GAKVALVVHPSPFGRAPVEDARKAARELGLQIVDVQEVGSGNLDNTALLKRFEQAG------------------VEYVVH 204 (392)
T ss_dssp TCEEEEEECSSHHHHTTHHHHHHHHHHHTCEEEEEEECCTTCCCCHHHHHHHHHTT------------------CCEEEE
T ss_pred CCEEEEEEeCCchhhhHHHHHHHHHHHcCCeEEEEEeeCCCCcCHHHHHHHHHhcC------------------CCEEEE
Confidence 3456555433222 23456666667776542 1 23445555554433 458887
Q ss_pred eCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHH
Q 026239 84 DYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRI 122 (241)
Q Consensus 84 D~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~ 122 (241)
.. .+.+...+++.+++... .+|++......+....
T Consensus 205 ~~--~~~~a~~~~~~~~~~g~--~~~~~~~~~~~~~~~~ 239 (392)
T 3lkb_A 205 QN--VAGPVANILKDAKRLGL--KMRHLGAHYTGGPDLI 239 (392)
T ss_dssp ES--CHHHHHHHHHHHHHTTC--CCEEEECGGGCSHHHH
T ss_pred ec--CcchHHHHHHHHHHcCC--CceEEEecCcccHHHH
Confidence 43 34456778888888764 6777655444444443
No 427
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=47.08 E-value=1.4e+02 Score=25.61 Aligned_cols=44 Identities=25% Similarity=0.286 Sum_probs=29.0
Q ss_pred CCcEEEEcc--CCChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 107 DIPVVIMSS--ENVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 107 ~ipvIils~--~~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
++-+|+++. ..-.+.+..|+++|..=|+-||+ +.++..+++...
T Consensus 110 ~vD~V~I~tp~~~H~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a 157 (417)
T 3v5n_A 110 GIEAVAIVTPNHVHYAAAKEFLKRGIHVICDKPLTSTLADAKKLKKAA 157 (417)
T ss_dssp CCSEEEECSCTTSHHHHHHHHHTTTCEEEEESSSCSSHHHHHHHHHHH
T ss_pred CCcEEEECCCcHHHHHHHHHHHhCCCeEEEECCCcCCHHHHHHHHHHH
Confidence 344444443 33466778899999999999996 556666555443
No 428
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=47.08 E-value=28 Score=28.70 Aligned_cols=40 Identities=10% Similarity=0.036 Sum_probs=33.2
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
+++++.+++... .++|||...+-.+.+.+.+++.+||+.+
T Consensus 229 ~~~i~~v~~~~~-~~ipvi~~GGI~~~~da~~~l~~GAd~V 268 (311)
T 1jub_A 229 LANVRAFYTRLK-PEIQIIGTGGIETGQDAFEHLLCGATML 268 (311)
T ss_dssp HHHHHHHHTTSC-TTSEEEEESSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHhcC-CCCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 678888887532 3799999999889999999999999876
No 429
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=47.05 E-value=35 Score=29.62 Aligned_cols=56 Identities=21% Similarity=0.279 Sum_probs=38.8
Q ss_pred ccccEEEEeCCCCCCC-HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 76 VGVNLVITDYCMPGMT-GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 76 ~~~dlIilD~~mp~~~-g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
..+|+|++|....... -.++++++++.. ++|||+- .-...+.+..+.++|||.+..
T Consensus 155 aGvdvIvldta~G~~~~~~e~I~~ik~~~---~i~Vi~g-~V~t~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 155 AGVDVIVLDSAHGHSLNIIRTLKEIKSKM---NIDVIVG-NVVTEEATKELIENGADGIKV 211 (400)
T ss_dssp HTCSEEEECCSCCSBHHHHHHHHHHHTTC---CCEEEEE-EECSHHHHHHHHHTTCSEEEE
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHhcC---CCeEEEe-ecCCHHHHHHHHHcCCCEEEE
Confidence 3467999987654322 267888888753 5777752 224567788899999998766
No 430
>2h6r_A Triosephosphate isomerase; beta-alpha barrel; 2.30A {Methanocaldococcus jannaschii}
Probab=47.03 E-value=99 Score=24.03 Aligned_cols=40 Identities=23% Similarity=0.343 Sum_probs=29.1
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
..++.++.... ++||++-++-..++.+..+...|+|+++.
T Consensus 159 ~~~~~ir~~~~--~~~ii~ggGI~~~~~~~~~~~~gaDgvlV 198 (219)
T 2h6r_A 159 GTVRAVKEINK--DVKVLCGAGISKGEDVKAALDLGAEGVLL 198 (219)
T ss_dssp HHHHHHHHHCT--TCEEEECSSCCSHHHHHHHHTTTCCCEEE
T ss_pred HHHHHHHhccC--CCeEEEEeCcCcHHHHHHHhhCCCCEEEE
Confidence 34555665432 68888777777778888888999999865
No 431
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=46.99 E-value=39 Score=23.07 Aligned_cols=50 Identities=20% Similarity=0.098 Sum_probs=28.7
Q ss_pred EEEEeCCCCCCC-------HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccc
Q 026239 80 LVITDYCMPGMT-------GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEF 133 (241)
Q Consensus 80 lIilD~~mp~~~-------g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~ 133 (241)
+|++|++--=.+ ..++++.+++. .++++++|+.............|..+|
T Consensus 4 ~i~~D~DgtL~~~~~~~~~~~~~l~~L~~~----G~~~~i~S~~~~~~~~~~l~~~~l~~~ 60 (137)
T 2pr7_A 4 GLIVDYAGVLDGTDEDQRRWRNLLAAAKKN----GVGTVILSNDPGGLGAAPIRELETNGV 60 (137)
T ss_dssp EEEECSTTTTSSCHHHHHHHHHHHHHHHHT----TCEEEEEECSCCGGGGHHHHHHHHTTS
T ss_pred EEEEeccceecCCCccCccHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHCChHhh
Confidence 788887532111 34677788764 578999998765443222234454444
No 432
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=46.66 E-value=37 Score=27.23 Aligned_cols=55 Identities=11% Similarity=0.077 Sum_probs=42.2
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCC
Q 026239 79 NLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKP 137 (241)
Q Consensus 79 dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP 137 (241)
.+|-++. .......++++++++... ++|+++=-+-.+++.+.++++ ||+..+.=.
T Consensus 157 ~~VYl~s-~G~~~~~~~i~~i~~~~~--~~Pv~vGgGI~t~e~a~~~~~-gAd~VIVGS 211 (240)
T 1viz_A 157 PIFYLEY-SGVLGDIEAVKKTKAVLE--TSTLFYGGGIKDAETAKQYAE-HADVIVVGN 211 (240)
T ss_dssp SEEEEEC-TTSCCCHHHHHHHHHTCS--SSEEEEESSCCSHHHHHHHHT-TCSEEEECT
T ss_pred CEEEEeC-CCccChHHHHHHHHHhcC--CCCEEEEeccCCHHHHHHHHh-CCCEEEECh
Confidence 3777777 433445889999998542 689888777888898888888 999988765
No 433
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=46.58 E-value=67 Score=26.55 Aligned_cols=32 Identities=25% Similarity=0.425 Sum_probs=23.4
Q ss_pred hHHHHHHHHhcccccccCCCC--HHHHHHhhHHH
Q 026239 119 PSRISRCLEEGAEEFFLKPVR--LSDLNKLKPHL 150 (241)
Q Consensus 119 ~~~~~~~l~~Ga~~~l~KP~~--~~~L~~~~~~l 150 (241)
.+.+..|+++|.+=|+-||+. .++..+++...
T Consensus 81 ~~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a 114 (337)
T 3ip3_A 81 GKILLEALERKIHAFVEKPIATTFEDLEKIRSVY 114 (337)
T ss_dssp HHHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHH
Confidence 456778999999999999974 45665555443
No 434
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=46.35 E-value=81 Score=24.96 Aligned_cols=17 Identities=18% Similarity=0.268 Sum_probs=10.1
Q ss_pred HHHHHHhhcCCCEEEEE
Q 026239 29 KLIERLLKTSSYQVTTV 45 (241)
Q Consensus 29 ~~l~~~L~~~g~~v~~~ 45 (241)
..+...++..||.+..+
T Consensus 36 ~gi~~~a~~~g~~~~~~ 52 (289)
T 2fep_A 36 RGIEDIATMYKYNIILS 52 (289)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHcCCEEEEE
Confidence 34455566677776654
No 435
>1o2d_A Alcohol dehydrogenase, iron-containing; TM0920, structural genomics, JCSG, PSI, protein structure initiative; HET: MSE NAP TRS; 1.30A {Thermotoga maritima} SCOP: e.22.1.2 PDB: 1vhd_A*
Probab=46.26 E-value=55 Score=27.81 Aligned_cols=66 Identities=20% Similarity=0.196 Sum_probs=39.8
Q ss_pred ceEEEEeCCHH-----HHHHHHHHhhcCCCEEEEEC------C---HHHHHHHhcccCCCCCCCCCCCCCCcccccccEE
Q 026239 16 FHVLAVDDSII-----DRKLIERLLKTSSYQVTTVD------S---GSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLV 81 (241)
Q Consensus 16 ~~ILiVdd~~~-----~~~~l~~~L~~~g~~v~~~~------~---~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlI 81 (241)
-++|||-|... ..+.+...|+..|+.+..++ + ..++++.+... .+|+|
T Consensus 41 ~~~liVtd~~~~~~~g~~~~v~~~L~~~g~~~~~~~~~~~~p~~~~v~~~~~~~~~~------------------~~d~I 102 (371)
T 1o2d_A 41 KRALVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAVERYRND------------------SFDFV 102 (371)
T ss_dssp SEEEEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHHHHHTTS------------------CCSEE
T ss_pred CEEEEEECchHHhhccHHHHHHHHHHHcCCeEEEeCCccCCCCHHHHHHHHHHHHhc------------------CCCEE
Confidence 57888877632 34667777887787665432 2 33455555433 35577
Q ss_pred EEeCCCCCCCHHHHHHHHHhc
Q 026239 82 ITDYCMPGMTGYDLLKKIKES 102 (241)
Q Consensus 82 ilD~~mp~~~g~~ll~~ir~~ 102 (241)
|- +.|.+-+|+.+.+...
T Consensus 103 Ia---vGGGsv~D~AK~iA~~ 120 (371)
T 1o2d_A 103 VG---LGGGSPMDFAKAVAVL 120 (371)
T ss_dssp EE---EESHHHHHHHHHHHHH
T ss_pred EE---eCChHHHHHHHHHHHH
Confidence 73 3456667777777653
No 436
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=46.23 E-value=81 Score=24.87 Aligned_cols=65 Identities=14% Similarity=0.127 Sum_probs=34.9
Q ss_pred HHHHHHHhhcC-CCEEEEEC------CHHH---HHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHH
Q 026239 28 RKLIERLLKTS-SYQVTTVD------SGSK---ALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLK 97 (241)
Q Consensus 28 ~~~l~~~L~~~-g~~v~~~~------~~~~---al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~ 97 (241)
...+...++.. ||.+.... +... .++.+... .+|.||+--..+. ...++++
T Consensus 28 ~~gi~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~~------------------~vdgiii~~~~~~-~~~~~~~ 88 (304)
T 3gbv_A 28 QKGIREAVTTYSDFNISANITHYDPYDYNSFVATSQAVIEE------------------QPDGVMFAPTVPQ-YTKGFTD 88 (304)
T ss_dssp HHHHHHHHHHTGGGCEEEEEEEECSSCHHHHHHHHHHHHTT------------------CCSEEEECCSSGG-GTHHHHH
T ss_pred HHHHHHHHHHHHhCCeEEEEEcCCCCCHHHHHHHHHHHHhc------------------CCCEEEECCCChH-HHHHHHH
Confidence 44556666777 88766431 3333 34444333 3456666432211 1235667
Q ss_pred HHHhcCCCCCCcEEEEcc
Q 026239 98 KIKESSSLRDIPVVIMSS 115 (241)
Q Consensus 98 ~ir~~~~~~~ipvIils~ 115 (241)
.+... .+|||++..
T Consensus 89 ~~~~~----~iPvV~~~~ 102 (304)
T 3gbv_A 89 ALNEL----GIPYIYIDS 102 (304)
T ss_dssp HHHHH----TCCEEEESS
T ss_pred HHHHC----CCeEEEEeC
Confidence 77654 678888865
No 437
>2kpo_A Rossmann 2X2 fold protein; de novo designed, rossmann fold, NESG, GFT structural G PSI-2, protein structure initiative; NMR {Artificial gene}
Probab=45.85 E-value=61 Score=21.25 Aligned_cols=45 Identities=11% Similarity=0.180 Sum_probs=36.2
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCC
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHED 60 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~ 60 (241)
+-|||+.+|....+..+.+-+.....+.++.+.++.-.++.....
T Consensus 3 lyvliisndkklieearkmaekanlelrtvktedelkkyleefrk 47 (110)
T 2kpo_A 3 LYVLIISNDKKLIEEARKMAEKANLELRTVKTEDELKKYLEEFRK 47 (110)
T ss_dssp EEEEEECSCHHHHHHHHHHHHHHTCEEEECCSHHHHHHHHHHHTS
T ss_pred EEEEEEcCcHHHHHHHHHHHHhcCceeeeeccHHHHHHHHHHHHh
Confidence 458999999888888888887788899999998888777765443
No 438
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=45.46 E-value=31 Score=29.30 Aligned_cols=54 Identities=9% Similarity=0.063 Sum_probs=36.9
Q ss_pred ccEEEEeCCCCCC-CHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 78 VNLVITDYCMPGM-TGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 78 ~dlIilD~~mp~~-~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
+|+|.+|...... +-++.+++||+..+ ++||++-+ -.+.+.+..+.++|||.+.
T Consensus 133 ~~~i~i~~~~g~~~~~~~~i~~lr~~~~--~~~vi~g~-v~t~e~A~~a~~aGaD~I~ 187 (351)
T 2c6q_A 133 VKYICLDVANGYSEHFVEFVKDVRKRFP--QHTIMAGN-VVTGEMVEELILSGADIIK 187 (351)
T ss_dssp CCEEEEECSCTTBHHHHHHHHHHHHHCT--TSEEEEEE-ECSHHHHHHHHHTTCSEEE
T ss_pred CCEEEEEecCCCcHHHHHHHHHHHHhcC--CCeEEEEe-CCCHHHHHHHHHhCCCEEE
Confidence 5688787654222 24678888988653 67887532 3457788899999998763
No 439
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=45.41 E-value=31 Score=29.56 Aligned_cols=41 Identities=7% Similarity=0.132 Sum_probs=34.3
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
+++++.+++... .++|||...+-.+.+.+.+++.+||+.+.
T Consensus 285 ~~~v~~i~~~v~-~~ipvI~~GGI~s~~da~~~l~~GAd~V~ 325 (367)
T 3zwt_A 285 TQTIREMYALTQ-GRVPIIGVGGVSSGQDALEKIRAGASLVQ 325 (367)
T ss_dssp HHHHHHHHHHTT-TCSCEEEESSCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHHcC-CCceEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 578888887642 36999999999999999999999998764
No 440
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=45.32 E-value=51 Score=26.38 Aligned_cols=84 Identities=13% Similarity=0.054 Sum_probs=48.1
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEEE-CCHHH---HHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTTV-DSGSK---ALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~---al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
....|||..-...+-..+.+.|...|+.|+.+ .+... +++.+..... .. +.++.+++.+
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~---------------~~--~~~~~~Dl~~ 73 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH---------------EN--VVFHQLDVTD 73 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC---------------CS--EEEEECCTTS
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC---------------Cc--eEEEEccCCC
Confidence 34578888888888888888887889998855 44433 3333322111 12 4444444444
Q ss_pred C-CH-HHHHHHHHhcCCCCCCcEEEEccC
Q 026239 90 M-TG-YDLLKKIKESSSLRDIPVVIMSSE 116 (241)
Q Consensus 90 ~-~g-~~ll~~ir~~~~~~~ipvIils~~ 116 (241)
. +. -.+++.+.+... .+-++|..+.
T Consensus 74 ~~~~v~~~~~~~~~~~g--~iD~lv~nAg 100 (311)
T 3o26_A 74 PIATMSSLADFIKTHFG--KLDILVNNAG 100 (311)
T ss_dssp CHHHHHHHHHHHHHHHS--SCCEEEECCC
T ss_pred cHHHHHHHHHHHHHhCC--CCCEEEECCc
Confidence 3 33 345566665432 5667776654
No 441
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=45.29 E-value=79 Score=25.75 Aligned_cols=85 Identities=12% Similarity=0.075 Sum_probs=49.3
Q ss_pred ceEEEE-eCCHHH---HHHHHHHhhcCCCEEEE---E----CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEe
Q 026239 16 FHVLAV-DDSIID---RKLIERLLKTSSYQVTT---V----DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITD 84 (241)
Q Consensus 16 ~~ILiV-dd~~~~---~~~l~~~L~~~g~~v~~---~----~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD 84 (241)
-+|.+| +|+... ...+...|+..|..+.. + .+....+..+.... +|+||+.
T Consensus 140 ~~ia~i~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~l~~~~------------------~d~i~~~ 201 (358)
T 3hut_A 140 TSVAVIGVTTDWGLSSAQAFRKAFELRGGAVVVNEEVPPGNRRFDDVIDEIEDEA------------------PQAIYLA 201 (358)
T ss_dssp CEEEEEEESSHHHHHHHHHHHHHHHHTTCEEEEEEEECTTCCCCHHHHHHHHHHC------------------CSEEEEE
T ss_pred CEEEEEecCcHHHHHHHHHHHHHHHHcCCEEEEEEecCCCCccHHHHHHHHHhcC------------------CCEEEEc
Confidence 455555 344332 34456667777876542 2 34555666664433 4588885
Q ss_pred CCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHH
Q 026239 85 YCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRI 122 (241)
Q Consensus 85 ~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~ 122 (241)
.. ......+++.+++... .+|++...+.......
T Consensus 202 ~~--~~~a~~~~~~~~~~g~--~~p~~~~~~~~~~~~~ 235 (358)
T 3hut_A 202 MA--YEDAAPFLRALRARGS--ALPVYGSSALYSPKFI 235 (358)
T ss_dssp SC--HHHHHHHHHHHHHTTC--CCCEEECGGGCSHHHH
T ss_pred cC--chHHHHHHHHHHHcCC--CCcEEecCcccCHHHH
Confidence 42 2245678888888765 6888766555554443
No 442
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=45.23 E-value=84 Score=25.88 Aligned_cols=111 Identities=13% Similarity=0.064 Sum_probs=54.0
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCC---cccccccEEEEeCCCCCCCH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNM---HQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~---~~~~~~dlIilD~~mp~~~g 92 (241)
.||+|+.-...-+. +.+.|...|+ |+.++...+.++ +.......-.+....+.. ..-...|.||+-.. .+...
T Consensus 116 ~~viI~G~G~~g~~-l~~~L~~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi~~~~-~d~~n 191 (336)
T 1lnq_A 116 RHVVICGWSESTLE-CLRELRGSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVIVDLE-SDSET 191 (336)
T ss_dssp CEEEEESCCHHHHH-HHTTGGGSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEEECCS-SHHHH
T ss_pred CCEEEECCcHHHHH-HHHHHHhCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEEEcCC-ccHHH
Confidence 46777776655443 4445555677 766665555554 332110000000000000 01224567776432 12234
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF 134 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l 134 (241)
+..+..+|+..+ +++||+-... ++.......+|++..+
T Consensus 192 ~~~~~~ar~~~~--~~~iiar~~~--~~~~~~l~~~G~d~vi 229 (336)
T 1lnq_A 192 IHCILGIRKIDE--SVRIIAEAER--YENIEQLRMAGADQVI 229 (336)
T ss_dssp HHHHHHHHTTCT--TSEEEEECSS--GGGHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHCC--CCeEEEEECC--HHHHHHHHHcCCCEEE
Confidence 455666676543 6677766543 3344455678987654
No 443
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=45.09 E-value=80 Score=23.57 Aligned_cols=66 Identities=12% Similarity=0.026 Sum_probs=37.1
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCC-EEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSY-QVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGY 93 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~-~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~ 93 (241)
.+|..||-++......+..+...|. .+. ...+..+.+. ....||+|+++..+. +-.
T Consensus 65 ~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~--------------------~~~~~D~i~~~~~~~--~~~ 122 (204)
T 3e05_A 65 GRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLD--------------------DLPDPDRVFIGGSGG--MLE 122 (204)
T ss_dssp SEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCT--------------------TSCCCSEEEESCCTT--CHH
T ss_pred CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhh--------------------cCCCCCEEEECCCCc--CHH
Confidence 5677777777766666666654443 122 2222221110 113588999987665 555
Q ss_pred HHHHHHHhcC
Q 026239 94 DLLKKIKESS 103 (241)
Q Consensus 94 ~ll~~ir~~~ 103 (241)
.+++.+....
T Consensus 123 ~~l~~~~~~L 132 (204)
T 3e05_A 123 EIIDAVDRRL 132 (204)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHHhc
Confidence 6777776543
No 444
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=45.07 E-value=80 Score=25.33 Aligned_cols=39 Identities=13% Similarity=0.162 Sum_probs=24.4
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHh
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFL 55 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l 55 (241)
++|.||.-- .+-..+...|...|++|+.++...+.++.+
T Consensus 4 m~i~iiG~G-~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~ 42 (316)
T 2ew2_A 4 MKIAIAGAG-AMGSRLGIMLHQGGNDVTLIDQWPAHIEAI 42 (316)
T ss_dssp CEEEEECCS-HHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CeEEEECcC-HHHHHHHHHHHhCCCcEEEEECCHHHHHHH
Confidence 578888764 445556666666788888765433434433
No 445
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=45.01 E-value=36 Score=28.61 Aligned_cols=44 Identities=16% Similarity=0.220 Sum_probs=29.8
Q ss_pred CCcEEEEccCC--ChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 107 DIPVVIMSSEN--VPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 107 ~ipvIils~~~--~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
++-+|+++... ..+.+..|+++|..=|+-||+ +.++..+++...
T Consensus 65 ~vD~V~i~tp~~~H~~~~~~al~aGkhVl~EKP~a~~~~ea~~l~~~a 112 (362)
T 3fhl_A 65 EIDLIVVNTPDNTHYEYAGMALEAGKNVVVEKPFTSTTKQGEELIALA 112 (362)
T ss_dssp TCCEEEECSCGGGHHHHHHHHHHTTCEEEEESSCCSSHHHHHHHHHHH
T ss_pred CCCEEEEeCChHHHHHHHHHHHHCCCeEEEecCCCCCHHHHHHHHHHH
Confidence 34455554433 356678899999999999997 566666655544
No 446
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=44.86 E-value=74 Score=28.07 Aligned_cols=43 Identities=14% Similarity=0.158 Sum_probs=27.6
Q ss_pred CCcEEEEccCC--ChHHHHHHHHhc------ccccccCCC--CHHHHHHhhHH
Q 026239 107 DIPVVIMSSEN--VPSRISRCLEEG------AEEFFLKPV--RLSDLNKLKPH 149 (241)
Q Consensus 107 ~ipvIils~~~--~~~~~~~~l~~G------a~~~l~KP~--~~~~L~~~~~~ 149 (241)
++-+|+++... ..+.+..|+++| ..=|+-||+ +.++..+++..
T Consensus 108 ~vD~V~I~tp~~~H~~~~~~al~aG~~~~~~khVl~EKPla~~~~ea~~l~~~ 160 (479)
T 2nvw_A 108 DIDMIVVSVKVPEHYEVVKNILEHSSQNLNLRYLYVEWALAASVQQAEELYSI 160 (479)
T ss_dssp TCSEEEECSCHHHHHHHHHHHHHHSSSCSSCCEEEEESSSSSSHHHHHHHHHH
T ss_pred CCCEEEEcCCcHHHHHHHHHHHHCCCCcCCceeEEEeCCCcCCHHHHHHHHHH
Confidence 44455555432 355677899999 778889996 45555555443
No 447
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=44.78 E-value=79 Score=22.24 Aligned_cols=41 Identities=17% Similarity=0.214 Sum_probs=30.2
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhc
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLG 56 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~ 56 (241)
.-+|+|+.-...-. .+.+.|...|+.|+.++...+.++.+.
T Consensus 7 ~~~viIiG~G~~G~-~la~~L~~~g~~v~vid~~~~~~~~~~ 47 (140)
T 3fwz_A 7 CNHALLVGYGRVGS-LLGEKLLASDIPLVVIETSRTRVDELR 47 (140)
T ss_dssp CSCEEEECCSHHHH-HHHHHHHHTTCCEEEEESCHHHHHHHH
T ss_pred CCCEEEECcCHHHH-HHHHHHHHCCCCEEEEECCHHHHHHHH
Confidence 46899999866544 555667778999998877777777664
No 448
>2o3a_A UPF0106 protein AF_0751; structural genomics, unknown function, PSI-2, protein structure initiative; 2.20A {Archaeoglobus fulgidus} SCOP: c.116.1.8
Probab=44.66 E-value=43 Score=25.40 Aligned_cols=80 Identities=16% Similarity=0.175 Sum_probs=55.8
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCC--CEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSS--YQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g--~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
.-+|++.++|+...+.+++..+++| |.+. ..+....+... .-.++-+.|=|.+-
T Consensus 33 A~~iil~~~D~~v~esv~dV~~rwGG~F~ve-~~~w~~~i~~w-----------------------~G~VVHLTMYG~~i 88 (178)
T 2o3a_A 33 AKGIYFDTEDKSVFESVRDVVERWGGDFFIK-AVSWKKLLREF-----------------------DGLKVHLTMYGIPL 88 (178)
T ss_dssp CSEEEESSCCHHHHHHHHHHHHHHCSCCEEE-ECCHHHHHHHC-----------------------CSEEEEEEEEEEEH
T ss_pred CCeeEEeCCCHHHHHHHHHHHHhcCCceEEE-ecCHHHHHHHc-----------------------CCEEEEEecCCCch
Confidence 4578999999999999999999887 7777 77777766644 14667778888888
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRI 122 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~ 122 (241)
-+++..|+. . .--+|++.++..+..+
T Consensus 89 ~dvi~~Ir~-~---~~iLvVVGaeKVP~ev 114 (178)
T 2o3a_A 89 PQKLEEIKR-A---DKVLVVVGAEKVPPEV 114 (178)
T ss_dssp HHHHHHHHT-C---SEEEEEEC----CTTH
T ss_pred HHHHHHhhc-C---CCEEEEECCCcCCHHH
Confidence 899999996 1 2223444555555443
No 449
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=44.65 E-value=25 Score=26.74 Aligned_cols=83 Identities=11% Similarity=0.126 Sum_probs=46.2
Q ss_pred eEEEEe--CCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCC--H
Q 026239 17 HVLAVD--DSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMT--G 92 (241)
Q Consensus 17 ~ILiVd--d~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~--g 92 (241)
+|.++. .+......+...|...|+.+..+.+.......+....++ |++|+ +..+|.+ -
T Consensus 47 ~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~-----------------dvvI~-iS~sG~t~~~ 108 (201)
T 3fxa_A 47 KIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKE-----------------DILIL-ISKGGNTGEL 108 (201)
T ss_dssp CEEEECCTHHHHHHHHHHHHHHHTTCCEEECCHHHHTTTGGGGCCTT-----------------CEEEE-ECSSSCCHHH
T ss_pred cEEEEEecHHHHHHHHHHHHHHhcCCcEEEeCchHHHhhhhhcCCCC-----------------CEEEE-EeCCCCCHHH
Confidence 566555 344555566666777788777765443222111111111 24433 3445543 4
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSR 121 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~ 121 (241)
+++++..++. .++||.+|+......
T Consensus 109 ~~~~~~ak~~----g~~vi~IT~~~~s~l 133 (201)
T 3fxa_A 109 LNLIPACKTK----GSTLIGVTENPDSVI 133 (201)
T ss_dssp HTTHHHHHHH----TCEEEEEESCTTSHH
T ss_pred HHHHHHHHHc----CCeEEEEECCCCChh
Confidence 5667777765 579999998765543
No 450
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=44.43 E-value=70 Score=26.10 Aligned_cols=32 Identities=13% Similarity=0.212 Sum_probs=21.6
Q ss_pred ChHHHHHHHHhcccccccCCC--CHHHHHHhhHH
Q 026239 118 VPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPH 149 (241)
Q Consensus 118 ~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~ 149 (241)
..+.+..+++.|..=|+-||+ +.++..++...
T Consensus 82 h~~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~ 115 (315)
T 3c1a_A 82 HAEITLAAIASGKAVLVEKPLTLDLAEAEAVAAA 115 (315)
T ss_dssp HHHHHHHHHHTTCEEEEESSSCSCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHH
Confidence 346677788899887888996 45555554443
No 451
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=44.35 E-value=10 Score=29.75 Aligned_cols=8 Identities=25% Similarity=0.173 Sum_probs=3.4
Q ss_pred CCEEEEEC
Q 026239 39 SYQVTTVD 46 (241)
Q Consensus 39 g~~v~~~~ 46 (241)
+..+..+.
T Consensus 31 ~vd~ie~g 38 (218)
T 3jr2_A 31 YVDVIEVG 38 (218)
T ss_dssp GCSEEEEC
T ss_pred CceEEEeC
Confidence 34444443
No 452
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=44.31 E-value=93 Score=24.26 Aligned_cols=64 Identities=16% Similarity=0.288 Sum_probs=34.9
Q ss_pred HHHHHHHhhcCCCEEEEECC---HHH---HHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH-HHHHHHHH
Q 026239 28 RKLIERLLKTSSYQVTTVDS---GSK---ALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG-YDLLKKIK 100 (241)
Q Consensus 28 ~~~l~~~L~~~g~~v~~~~~---~~~---al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g-~~ll~~ir 100 (241)
...+...++..||.+..+.+ ... .++.+. ...+|-||+.-. +.+. .+.++.++
T Consensus 20 ~~gi~~~~~~~g~~~~~~~~~~~~~~~~~~i~~l~------------------~~~vdgiIi~~~--~~~~~~~~~~~~~ 79 (271)
T 2dri_A 20 KDGAQKEADKLGYNLVVLDSQNNPAKELANVQDLT------------------VRGTKILLINPT--DSDAVGNAVKMAN 79 (271)
T ss_dssp HHHHHHHHHHHTCEEEEEECTTCHHHHHHHHHHHT------------------TTTEEEEEECCS--STTTTHHHHHHHH
T ss_pred HHHHHHHHHHcCcEEEEeCCCCCHHHHHHHHHHHH------------------HcCCCEEEEeCC--ChHHHHHHHHHHH
Confidence 34456666778998876532 222 233332 234667776322 2222 34566666
Q ss_pred hcCCCCCCcEEEEcc
Q 026239 101 ESSSLRDIPVVIMSS 115 (241)
Q Consensus 101 ~~~~~~~ipvIils~ 115 (241)
.. .+|||++..
T Consensus 80 ~~----~iPvV~i~~ 90 (271)
T 2dri_A 80 QA----NIPVITLDR 90 (271)
T ss_dssp HT----TCCEEEESS
T ss_pred HC----CCcEEEecC
Confidence 53 678888854
No 453
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=44.24 E-value=49 Score=25.63 Aligned_cols=68 Identities=12% Similarity=0.147 Sum_probs=45.9
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCC--EEE-EECCHHHHHH-HhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSY--QVT-TVDSGSKALE-FLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~-~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
...+|..||-++......+..+...|+ .+. ...+..+.+. .+ ...||+||+|...+.
T Consensus 94 ~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-------------------~~~fD~V~~~~~~~~ 154 (232)
T 3ntv_A 94 DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVN-------------------DKVYDMIFIDAAKAQ 154 (232)
T ss_dssp TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHT-------------------TSCEEEEEEETTSSS
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhc-------------------cCCccEEEEcCcHHH
Confidence 357899999999988888888887774 344 4556655444 33 235889999975433
Q ss_pred CCHHHHHHHHHhc
Q 026239 90 MTGYDLLKKIKES 102 (241)
Q Consensus 90 ~~g~~ll~~ir~~ 102 (241)
-..+++.+...
T Consensus 155 --~~~~l~~~~~~ 165 (232)
T 3ntv_A 155 --SKKFFEIYTPL 165 (232)
T ss_dssp --HHHHHHHHGGG
T ss_pred --HHHHHHHHHHh
Confidence 34566666543
No 454
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=44.09 E-value=83 Score=25.73 Aligned_cols=38 Identities=13% Similarity=0.165 Sum_probs=22.0
Q ss_pred ceEEEEeCCHHHHH-HHHHHhhcCCCEEEEECCHHHHHH
Q 026239 16 FHVLAVDDSIIDRK-LIERLLKTSSYQVTTVDSGSKALE 53 (241)
Q Consensus 16 ~~ILiVdd~~~~~~-~l~~~L~~~g~~v~~~~~~~~al~ 53 (241)
++|.||.--..-.. .+..+....+++++.++...+..+
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~~ 41 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLG 41 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHH
Confidence 68888887665553 444444444677775554333333
No 455
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=44.07 E-value=40 Score=25.50 Aligned_cols=33 Identities=15% Similarity=0.052 Sum_probs=25.1
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSG 48 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~ 48 (241)
++|+|||.-..+...+.+.|+..|+.+..+.+.
T Consensus 1 ~~i~iiDn~~s~~~~i~~~l~~~G~~~~v~~~~ 33 (192)
T 1i1q_B 1 ADILLLDNIDSFTWNLADQLRTNGHNVVIYRNH 33 (192)
T ss_dssp CEEEEEECSCSSHHHHHHHHHHTTCEEEEEETT
T ss_pred CcEEEEECCccHHHHHHHHHHHCCCeEEEEECC
Confidence 479999965556677788888889888766544
No 456
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=43.91 E-value=65 Score=27.90 Aligned_cols=100 Identities=16% Similarity=0.216 Sum_probs=58.1
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHH
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYD 94 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ 94 (241)
..||+||.-... -..+.+.|...|+.|+.++...+.++.+... .+.+|+-|.. -.+
T Consensus 4 ~~~viIiG~Gr~-G~~va~~L~~~g~~vvvId~d~~~v~~~~~~------------------g~~vi~GDat-----~~~ 59 (413)
T 3l9w_A 4 GMRVIIAGFGRF-GQITGRLLLSSGVKMVVLDHDPDHIETLRKF------------------GMKVFYGDAT-----RMD 59 (413)
T ss_dssp CCSEEEECCSHH-HHHHHHHHHHTTCCEEEEECCHHHHHHHHHT------------------TCCCEESCTT-----CHH
T ss_pred CCeEEEECCCHH-HHHHHHHHHHCCCCEEEEECCHHHHHHHHhC------------------CCeEEEcCCC-----CHH
Confidence 468999998664 4556677777899999888777777776532 2336666653 345
Q ss_pred HHHHHHhcCCCCCCcEEEEccCCChHH---HHHHHHhccc-ccccCCCCHHH
Q 026239 95 LLKKIKESSSLRDIPVVIMSSENVPSR---ISRCLEEGAE-EFFLKPVRLSD 142 (241)
Q Consensus 95 ll~~ir~~~~~~~ipvIils~~~~~~~---~~~~l~~Ga~-~~l~KP~~~~~ 142 (241)
+++...- ....+||++..++... +..+.+.+.+ ..+.+-.+...
T Consensus 60 ~L~~agi----~~A~~viv~~~~~~~n~~i~~~ar~~~p~~~Iiara~~~~~ 107 (413)
T 3l9w_A 60 LLESAGA----AKAEVLINAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDH 107 (413)
T ss_dssp HHHHTTT----TTCSEEEECCSSHHHHHHHHHHHHHHCTTCEEEEEESSHHH
T ss_pred HHHhcCC----CccCEEEECCCChHHHHHHHHHHHHhCCCCeEEEEECCHHH
Confidence 5555421 2455666655543333 2233455554 33444444433
No 457
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=43.79 E-value=53 Score=26.14 Aligned_cols=63 Identities=14% Similarity=0.096 Sum_probs=41.0
Q ss_pred EEEEeCCCCCC-CH--HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccc------cCCCCHHHHHH
Q 026239 80 LVITDYCMPGM-TG--YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFF------LKPVRLSDLNK 145 (241)
Q Consensus 80 lIilD~~mp~~-~g--~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l------~KP~~~~~L~~ 145 (241)
++++|+.--|+ .| +++++.+.+..+ ++|||+-.+-.+.+.+.++ +.++++.+ ..-++.+++.+
T Consensus 168 il~t~Id~DGt~~G~d~~l~~~l~~~~~--~ipviasGGv~~~~Dl~~l-~~~~~gvivg~Al~~g~i~l~ea~~ 239 (243)
T 4gj1_A 168 ILCTDISKDGTMQGVNVRLYKLIHEIFP--NICIQASGGVASLKDLENL-KGICSGVIVGKALLDGVFSVEEGIR 239 (243)
T ss_dssp EEEEETTC-----CCCHHHHHHHHHHCT--TSEEEEESCCCSHHHHHHT-TTTCSEEEECHHHHTTSSCHHHHHH
T ss_pred EEeeeecccccccCCCHHHHHHHHHhcC--CCCEEEEcCCCCHHHHHHH-HccCchhehHHHHHCCCCCHHHHHH
Confidence 89999977653 34 578899987543 7899988888888887654 55666543 34455555433
No 458
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=43.77 E-value=67 Score=25.51 Aligned_cols=28 Identities=14% Similarity=0.197 Sum_probs=18.9
Q ss_pred cccccEEEEeCCCCCC-CHHHHHHHHHhc
Q 026239 75 EVGVNLVITDYCMPGM-TGYDLLKKIKES 102 (241)
Q Consensus 75 ~~~~dlIilD~~mp~~-~g~~ll~~ir~~ 102 (241)
...||+|++...+.-. +-..+++.++..
T Consensus 134 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~ 162 (285)
T 4htf_A 134 ETPVDLILFHAVLEWVADPRSVLQTLWSV 162 (285)
T ss_dssp SSCEEEEEEESCGGGCSCHHHHHHHHHHT
T ss_pred CCCceEEEECchhhcccCHHHHHHHHHHH
Confidence 3568999998765433 445677777754
No 459
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=43.75 E-value=83 Score=26.83 Aligned_cols=41 Identities=12% Similarity=0.224 Sum_probs=31.3
Q ss_pred HHHHHHHHHhcCCCCCCcEEEE--ccCCChHHHHHHHHhccccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVVIM--SSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIil--s~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
-++.+++|++.. ++||++= ......+.+..+.++|++.+..
T Consensus 175 ~~~~i~~i~~~~---~vPVivK~vG~g~s~~~A~~l~~aGad~I~V 217 (368)
T 3vkj_A 175 ALEKLRDISKEL---SVPIIVKESGNGISMETAKLLYSYGIKNFDT 217 (368)
T ss_dssp HHHHHHHHHTTC---SSCEEEECSSSCCCHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHc---CCCEEEEeCCCCCCHHHHHHHHhCCCCEEEE
Confidence 477888888753 7899883 3334678888999999998866
No 460
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=43.74 E-value=83 Score=24.79 Aligned_cols=67 Identities=16% Similarity=0.095 Sum_probs=47.2
Q ss_pred EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC--CHHHHHHHHHhcCCCCCCcEEEEccCCChHH
Q 026239 44 TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM--TGYDLLKKIKESSSLRDIPVVIMSSENVPSR 121 (241)
Q Consensus 44 ~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~--~g~~ll~~ir~~~~~~~ipvIils~~~~~~~ 121 (241)
-+.+.+|++..+.. .+|+|=+ .|.. .|.++++.|+.- ++++|++.. +.-+.+.
T Consensus 118 G~~TptE~~~A~~~-------------------Gad~vK~---FPa~~~gG~~~lkal~~p--~p~i~~~pt-GGI~~~N 172 (217)
T 3lab_A 118 GVATASEVMIAAQA-------------------GITQLKC---FPASAIGGAKLLKAWSGP--FPDIQFCPT-GGISKDN 172 (217)
T ss_dssp EECSHHHHHHHHHT-------------------TCCEEEE---TTTTTTTHHHHHHHHHTT--CTTCEEEEB-SSCCTTT
T ss_pred CCCCHHHHHHHHHc-------------------CCCEEEE---CccccccCHHHHHHHHhh--hcCceEEEe-CCCCHHH
Confidence 57899999888743 2445533 4543 489999999974 358888754 4455788
Q ss_pred HHHHHHhccccccc
Q 026239 122 ISRCLEEGAEEFFL 135 (241)
Q Consensus 122 ~~~~l~~Ga~~~l~ 135 (241)
+.+++++|+...+.
T Consensus 173 ~~~~l~aGa~~~vg 186 (217)
T 3lab_A 173 YKEYLGLPNVICAG 186 (217)
T ss_dssp HHHHHHSTTBCCEE
T ss_pred HHHHHHCCCEEEEE
Confidence 89999999865543
No 461
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=43.73 E-value=84 Score=22.24 Aligned_cols=107 Identities=16% Similarity=0.139 Sum_probs=64.4
Q ss_pred CcceEEEEeCCHHHHHHHHHHhhcCCCEEEE-ECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 14 SQFHVLAVDDSIIDRKLIERLLKTSSYQVTT-VDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~-~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
..++++++.+.+. ...+..+++..+..+.. .-+.++..+++.. .|++|+-.. .+.-|
T Consensus 31 ~~~~l~i~G~g~~-~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~--------------------adv~v~ps~-~e~~~ 88 (166)
T 3qhp_A 31 QDIVLLLKGKGPD-EKKIKLLAQKLGVKAEFGFVNSNELLEILKT--------------------CTLYVHAAN-VESEA 88 (166)
T ss_dssp GGEEEEEECCSTT-HHHHHHHHHHHTCEEECCCCCHHHHHHHHTT--------------------CSEEEECCC-SCCCC
T ss_pred CCeEEEEEeCCcc-HHHHHHHHHHcCCeEEEeecCHHHHHHHHHh--------------------CCEEEECCc-ccCcc
Confidence 3678888887654 45667777766665554 1124666666642 357776443 34456
Q ss_pred HHHHHHHHhcCCCCCC-cEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 93 YDLLKKIKESSSLRDI-PVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~i-pvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
+.+++.+.. .+ |||..+....... .+..| +++..|.+.++|...+..++.
T Consensus 89 ~~~~Eama~-----G~vPvi~~~~~~~~~~---~~~~~--~~~~~~~~~~~l~~~i~~l~~ 139 (166)
T 3qhp_A 89 IACLEAISV-----GIVPVIANSPLSATRQ---FALDE--RSLFEPNNAKDLSAKIDWWLE 139 (166)
T ss_dssp HHHHHHHHT-----TCCEEEECCTTCGGGG---GCSSG--GGEECTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhc-----CCCcEEeeCCCCchhh---hccCC--ceEEcCCCHHHHHHHHHHHHh
Confidence 777777764 55 8887332222221 11222 347778899999887777765
No 462
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=43.67 E-value=1.1e+02 Score=25.56 Aligned_cols=63 Identities=10% Similarity=0.074 Sum_probs=41.6
Q ss_pred cEEEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccc---------------cc--ccCCCCHH
Q 026239 79 NLVITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAE---------------EF--FLKPVRLS 141 (241)
Q Consensus 79 dlIilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~---------------~~--l~KP~~~~ 141 (241)
|++++-.. .+.-|+.+++.+.. .+|||.... ....+.+..|.. ++ +..|.+.+
T Consensus 275 dv~v~pS~-~E~~~~~~lEAma~-----G~PvI~s~~----~g~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~~d~~ 344 (413)
T 3oy2_A 275 DVIVNCSS-GEGFGLCSAEGAVL-----GKPLIISAV----GGADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGIIDVD 344 (413)
T ss_dssp SEEEECCS-CCSSCHHHHHHHTT-----TCCEEEECC----HHHHHHSCTTTSEEECCCEEEECTTTCSSCCEEEECCHH
T ss_pred CEEEeCCC-cCCCCcHHHHHHHc-----CCCEEEcCC----CChHHHHccCcccccccccccccccccCcceeeCCCCHH
Confidence 57776433 33446677776653 678886432 234455666666 88 99999999
Q ss_pred HHHHhhHHHHH
Q 026239 142 DLNKLKPHLMK 152 (241)
Q Consensus 142 ~L~~~~~~l~~ 152 (241)
+|...+ .++.
T Consensus 345 ~la~~i-~l~~ 354 (413)
T 3oy2_A 345 DLVEAF-TFFK 354 (413)
T ss_dssp HHHHHH-HHTT
T ss_pred HHHHHH-HHhc
Confidence 998877 7764
No 463
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=43.67 E-value=8.1 Score=30.76 Aligned_cols=59 Identities=15% Similarity=0.197 Sum_probs=37.2
Q ss_pred cccEEEEeCCCCCCC-------HHHHHHHHHhcCC--CCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 77 GVNLVITDYCMPGMT-------GYDLLKKIKESSS--LRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 77 ~~dlIilD~~mp~~~-------g~~ll~~ir~~~~--~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
..|.|++-...|+.+ +++.++++|+... ..++||.+-.+-+ .+.+..+.++||+.++.=
T Consensus 134 ~~D~v~~msv~pg~ggq~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GGI~-~~~~~~~~~aGad~vvvG 201 (230)
T 1tqj_A 134 VCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLK-PNNTWQVLEAGANAIVAG 201 (230)
T ss_dssp GCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCC-TTTTHHHHHHTCCEEEES
T ss_pred cCCEEEEEEeccccCCccCcHHHHHHHHHHHHHHHhcCCCCcEEEECCcC-HHHHHHHHHcCCCEEEEC
Confidence 467777766667532 4677777775421 0157887766644 467778889999988653
No 464
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=43.56 E-value=44 Score=26.17 Aligned_cols=40 Identities=15% Similarity=0.238 Sum_probs=32.3
Q ss_pred HHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 94 DLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 94 ~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
++++.+++.. ++|+++-.+-.+++.+..++++||+.++.-
T Consensus 64 ~~i~~i~~~~---~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg 103 (244)
T 2y88_A 64 ELLAEVVGKL---DVQVELSGGIRDDESLAAALATGCARVNVG 103 (244)
T ss_dssp HHHHHHHHHC---SSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 8899998753 689988777777888999999999877553
No 465
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=43.45 E-value=62 Score=25.58 Aligned_cols=17 Identities=18% Similarity=0.251 Sum_probs=9.5
Q ss_pred HHHHHHhhcCCCEEEEE
Q 026239 29 KLIERLLKTSSYQVTTV 45 (241)
Q Consensus 29 ~~l~~~L~~~g~~v~~~ 45 (241)
..+...++..||.+..+
T Consensus 28 ~gi~~~a~~~g~~~~~~ 44 (290)
T 3clk_A 28 DGIQEEAHKNGYNLIIV 44 (290)
T ss_dssp HHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHcCCeEEEE
Confidence 34445555667766554
No 466
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=43.14 E-value=56 Score=26.21 Aligned_cols=88 Identities=13% Similarity=0.197 Sum_probs=49.8
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCCE--EE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSYQ--VT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~~--v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
.+|..+|-++......+.-++..|.. |. ...|+.+.+. ....||+|++ .+|.|
T Consensus 46 ~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~--------------------~~~~~D~Ivi----agmGg 101 (244)
T 3gnl_A 46 SFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIE--------------------KKDAIDTIVI----AGMGG 101 (244)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC--------------------GGGCCCEEEE----EEECH
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccC--------------------ccccccEEEE----eCCch
Confidence 46888888887777777777766642 33 3445433221 1123788887 35566
Q ss_pred HHHHHHHHhcC-CCCCCcEEEEccCCChHHHHHHHH
Q 026239 93 YDLLKKIKESS-SLRDIPVVIMSSENVPSRISRCLE 127 (241)
Q Consensus 93 ~~ll~~ir~~~-~~~~ipvIils~~~~~~~~~~~l~ 127 (241)
--+.+.|.... .+.....+|+++......+.+++.
T Consensus 102 ~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~lr~~L~ 137 (244)
T 3gnl_A 102 TLIRTILEEGAAKLAGVTKLILQPNIAAWQLREWSE 137 (244)
T ss_dssp HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEcCCChHHHHHHHH
Confidence 32333232211 112456777888777777776664
No 467
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=43.12 E-value=1.2e+02 Score=24.77 Aligned_cols=69 Identities=16% Similarity=0.061 Sum_probs=34.9
Q ss_pred ceEEEEeCCHHHHHHHHHHhhc-----CCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC
Q 026239 16 FHVLAVDDSIIDRKLIERLLKT-----SSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG 89 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~-----~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~ 89 (241)
.+|..||-++......++.+.. ..-.+. ...++.+.+... ....||+||+|...|.
T Consensus 120 ~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~------------------~~~~fDvIi~d~~~~~ 181 (304)
T 3bwc_A 120 EHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT------------------PDNTYDVVIIDTTDPA 181 (304)
T ss_dssp CEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS------------------CTTCEEEEEEECC---
T ss_pred CEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc------------------cCCceeEEEECCCCcc
Confidence 4677777777666666655521 011222 344544433210 1235899999987654
Q ss_pred CCH-----HHHHHHHHhc
Q 026239 90 MTG-----YDLLKKIKES 102 (241)
Q Consensus 90 ~~g-----~~ll~~ir~~ 102 (241)
... .++++.++..
T Consensus 182 ~~~~~l~~~~~l~~~~~~ 199 (304)
T 3bwc_A 182 GPASKLFGEAFYKDVLRI 199 (304)
T ss_dssp ------CCHHHHHHHHHH
T ss_pred ccchhhhHHHHHHHHHHh
Confidence 221 3667666653
No 468
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=43.09 E-value=1.2e+02 Score=24.97 Aligned_cols=44 Identities=14% Similarity=0.366 Sum_probs=29.1
Q ss_pred CCcEEEEccC--CChHHHHHHHHhcccccccCCC--CHHHHHHhhHHH
Q 026239 107 DIPVVIMSSE--NVPSRISRCLEEGAEEFFLKPV--RLSDLNKLKPHL 150 (241)
Q Consensus 107 ~ipvIils~~--~~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~~l 150 (241)
++-+|+++.. ...+.+..|+++|..=|+-||+ +.++..+++...
T Consensus 66 ~vD~V~i~tp~~~H~~~~~~al~~GkhVl~EKP~a~~~~e~~~l~~~a 113 (334)
T 3ohs_X 66 NVEVAYVGTQHPQHKAAVMLCLAAGKAVLCEKPMGVNAAEVREMVTEA 113 (334)
T ss_dssp TCCEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHH
T ss_pred CCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCHHHHHHHHHHH
Confidence 3444544433 3456677899999998999997 566666655543
No 469
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=42.86 E-value=67 Score=26.94 Aligned_cols=34 Identities=12% Similarity=0.180 Sum_probs=23.9
Q ss_pred hcCcceEEEEeCCHHHHHHHHHHhhcCCCEEEEEC
Q 026239 12 AESQFHVLAVDDSIIDRKLIERLLKTSSYQVTTVD 46 (241)
Q Consensus 12 ~~~~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~ 46 (241)
...+.+|||+......+. +...++..|+.|..++
T Consensus 8 ~~~~~~ili~g~g~~~~~-~~~a~~~~G~~v~~~~ 41 (391)
T 1kjq_A 8 RPAATRVMLLGSGELGKE-VAIECQRLGVEVIAVD 41 (391)
T ss_dssp STTCCEEEEESCSHHHHH-HHHHHHTTTCEEEEEE
T ss_pred CCCCCEEEEECCCHHHHH-HHHHHHHcCCEEEEEE
Confidence 445689999988765544 4556677899887654
No 470
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=42.66 E-value=71 Score=28.42 Aligned_cols=57 Identities=12% Similarity=0.239 Sum_probs=40.2
Q ss_pred ccccEEEEeCCCCCCC-HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 76 VGVNLVITDYCMPGMT-GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 76 ~~~dlIilD~~mp~~~-g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
..+|+|.+|....... .+++++++++.. +++||++-+- ...+.+..+.++||+.+..
T Consensus 266 aG~d~v~i~~~~G~~~~~~~~i~~i~~~~--~~~pvi~~~v-~t~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 266 AGVDVIVLDSSQGNSVYQIAMVHYIKQKY--PHLQVIGGNV-VTAAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp TTCSEEEECCSCCCSHHHHHHHHHHHHHC--TTCEEEEEEE-CSHHHHHHHHHHTCSEEEE
T ss_pred cCCCEEEeeccCCcchhHHHHHHHHHHhC--CCCceEeccc-chHHHHHHHHHcCCCEEEE
Confidence 3467999987754333 358899999875 3788876322 4567788899999987644
No 471
>1wbh_A KHG/KDPG aldolase; lyase; 1.55A {Escherichia coli} SCOP: c.1.10.1 PDB: 2c0a_A 1wau_A 1eua_A 1eun_A 1fq0_A* 1fwr_A*
Probab=42.57 E-value=1.2e+02 Score=23.59 Aligned_cols=71 Identities=11% Similarity=0.109 Sum_probs=46.4
Q ss_pred CCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC--CCHHHHHHHHHhcCCCCCCcEEEEc
Q 026239 38 SSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG--MTGYDLLKKIKESSSLRDIPVVIMS 114 (241)
Q Consensus 38 ~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~--~~g~~ll~~ir~~~~~~~ipvIils 114 (241)
.|..+. -+.+..++...+.. ..|.|-+ .|. ..|.+.++.++... +++|++.+.
T Consensus 108 ~g~~~i~G~~t~~e~~~A~~~-------------------Gad~v~~---Fpa~~~gG~~~lk~i~~~~--~~ipvvaiG 163 (214)
T 1wbh_A 108 GTIPLIPGISTVSELMLGMDY-------------------GLKEFKF---FPAEANGGVKALQAIAGPF--SQVRFCPTG 163 (214)
T ss_dssp SSSCEEEEESSHHHHHHHHHT-------------------TCCEEEE---TTTTTTTHHHHHHHHHTTC--TTCEEEEBS
T ss_pred hCCCEEEecCCHHHHHHHHHC-------------------CCCEEEE---ecCccccCHHHHHHHhhhC--CCCeEEEEC
Confidence 444333 47778887776632 2446655 453 34799999999754 389997665
Q ss_pred cCCChHHHHHHHHh-ccccc
Q 026239 115 SENVPSRISRCLEE-GAEEF 133 (241)
Q Consensus 115 ~~~~~~~~~~~l~~-Ga~~~ 133 (241)
+ -+.+.+..++.+ |++.+
T Consensus 164 G-I~~~n~~~~l~agg~~~v 182 (214)
T 1wbh_A 164 G-ISPANYRDYLALKSVLCI 182 (214)
T ss_dssp S-CCTTTHHHHHTSTTBSCE
T ss_pred C-CCHHHHHHHHhcCCCeEE
Confidence 5 456678888998 66554
No 472
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=42.53 E-value=1e+02 Score=24.32 Aligned_cols=16 Identities=13% Similarity=0.096 Sum_probs=8.0
Q ss_pred HHHHHhhcCCCEEEEE
Q 026239 30 LIERLLKTSSYQVTTV 45 (241)
Q Consensus 30 ~l~~~L~~~g~~v~~~ 45 (241)
.+...++..||.+..+
T Consensus 29 gi~~~a~~~g~~~~~~ 44 (290)
T 2rgy_A 29 QTDLELRAVHRHVVVA 44 (290)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHCCCEEEEE
Confidence 3344445556655543
No 473
>3sy8_A ROCR; TIM barrel phosphodiesterase-A, transcription regulator; HET: EPE; 2.50A {Pseudomonas aeruginosa}
Probab=42.21 E-value=32 Score=29.35 Aligned_cols=72 Identities=13% Similarity=0.168 Sum_probs=43.4
Q ss_pred ccccccEEEEeCCCC-----CCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccc---c-cccCCCCHHHHH
Q 026239 74 QEVGVNLVITDYCMP-----GMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAE---E-FFLKPVRLSDLN 144 (241)
Q Consensus 74 ~~~~~dlIilD~~mp-----~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~---~-~l~KP~~~~~L~ 144 (241)
...++|.|=+|-.+- +.....+++.|-.....-++.|| .-+-.+.+....+.+.|++ | |+.||...+++.
T Consensus 308 ~~l~~d~iKiD~~~v~~~~~~~~~~~~v~~i~~~a~~l~~~vv-aEGVEt~~~~~~l~~~g~~~~QGy~~~~P~~~~~~~ 386 (400)
T 3sy8_A 308 CEFPFSQIKLDRTFVQKMKTQPRSCAVISSVVALAQALGISLV-VEGVESDEQRVRLIELGCSIAQGYLFARPMPEQHFL 386 (400)
T ss_dssp SSCCCSEEEECTHHHHHHHHCTTHHHHHHHHHHHHHHHTCEEE-ECCCCCHHHHHHHHHHTCCEECBTTTBCCBCHHHHH
T ss_pred HhCCCCEEEECHHHHhhhhcChhHHHHHHHHHHHHHHcCCeEE-EecCCcHHHHHHHHHcCCCEEEcCeecCcCCHHHHH
Confidence 345577888885431 23344455544332211134444 5555667777778889986 3 478999998885
Q ss_pred Hh
Q 026239 145 KL 146 (241)
Q Consensus 145 ~~ 146 (241)
..
T Consensus 387 ~~ 388 (400)
T 3sy8_A 387 DY 388 (400)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 474
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=42.10 E-value=63 Score=29.91 Aligned_cols=32 Identities=16% Similarity=0.100 Sum_probs=27.1
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEEEEC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVTTVD 46 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~~~~ 46 (241)
..+|+|||....+...|.+.|...|+.+.++.
T Consensus 446 Gk~IlviD~gdsf~~~l~~~l~~~G~~v~Vv~ 477 (645)
T 3r75_A 446 GCRALIVDAEDHFTAMIAQQLSSLGLATEVCG 477 (645)
T ss_dssp TCEEEEEESSCTHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEEECCccHHHHHHHHHHHCCCEEEEEE
Confidence 46899999888888889999999998887653
No 475
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=41.98 E-value=72 Score=24.38 Aligned_cols=86 Identities=13% Similarity=0.103 Sum_probs=48.8
Q ss_pred CcceEEEEeCCHHHHHH----HHHHhhcCCCEEE-EEC---CHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeC
Q 026239 14 SQFHVLAVDDSIIDRKL----IERLLKTSSYQVT-TVD---SGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDY 85 (241)
Q Consensus 14 ~~~~ILiVdd~~~~~~~----l~~~L~~~g~~v~-~~~---~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~ 85 (241)
...+|+++.|+....-. +...|. ++.+. ..- +..+.+..+.... .....+|+||+-+
T Consensus 38 ~~~~i~~~GDSit~g~~~~~~~~~~~~--~~~v~n~g~~G~t~~~~~~~~~~~~-------------l~~~~pd~vvi~~ 102 (229)
T 1fxw_F 38 KEPDVLFVGDSMVQLMQQYEIWRELFS--PLHALNFGIGGDTTRHVLWRLKNGE-------------LENIKPKVIVVWV 102 (229)
T ss_dssp CCCSEEEEESHHHHGGGGSHHHHHHTG--GGTEEEEECTTCCHHHHHHHHHTTT-------------TSSCCCSEEEEEC
T ss_pred CCCCEEEEecchhcCCCCchhHHHHcC--CCcceeeccCcchHHHHHHHHHcCc-------------cccCCCCEEEEEE
Confidence 56899999999765432 455554 33333 222 3334444443210 0123578999977
Q ss_pred CCCCC--CH-------HHHHHHHHhcCCCCCCcEEEEccC
Q 026239 86 CMPGM--TG-------YDLLKKIKESSSLRDIPVVIMSSE 116 (241)
Q Consensus 86 ~mp~~--~g-------~~ll~~ir~~~~~~~ipvIils~~ 116 (241)
...+. +- ..+++.|+...+ ..+||+++..
T Consensus 103 G~ND~~~~~~~~~~~l~~~i~~l~~~~p--~~~iil~~~~ 140 (229)
T 1fxw_F 103 GTNNHENTAEEVAGGIEAIVQLINTRQP--QAKIIVLGLL 140 (229)
T ss_dssp CTTCTTSCHHHHHHHHHHHHHHHHHHCT--TCEEEEECCC
T ss_pred ecCCCCCCHHHHHHHHHHHHHHHHHHCC--CCeEEEEeCC
Confidence 66654 11 236677776643 6788887653
No 476
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=41.94 E-value=5.4 Score=31.93 Aligned_cols=40 Identities=8% Similarity=0.295 Sum_probs=0.0
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
+++++.+++.. ++|||...+-.+.+.+.++++.||++++.
T Consensus 189 ~~~~~~i~~~~---~iPvia~GGI~~~~d~~~~~~~Gad~v~v 228 (247)
T 3tdn_A 189 TEMIRFVRPLT---TLPIIASGGAGKMEHFLEAFLRGADKVSI 228 (247)
T ss_dssp -------------------------------------------
T ss_pred HHHHHHHHHhC---CCCEEEECCCCCHHHHHHHHHcCCcHhhc
Confidence 56788887643 78999888877788888999999988754
No 477
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=41.83 E-value=1e+02 Score=25.72 Aligned_cols=76 Identities=21% Similarity=0.287 Sum_probs=0.0
Q ss_pred hcCcceEEEEeCC----HHHHHHHHHHhhcCCCEEEEECCHH--------------------------------------
Q 026239 12 AESQFHVLAVDDS----IIDRKLIERLLKTSSYQVTTVDSGS-------------------------------------- 49 (241)
Q Consensus 12 ~~~~~~ILiVdd~----~~~~~~l~~~L~~~g~~v~~~~~~~-------------------------------------- 49 (241)
....||||++-.. ..-...|.+.|...|++|.++....
T Consensus 12 ~~~~MrIl~~~~~~~gh~~~~~~La~~L~~~GheV~v~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (398)
T 4fzr_A 12 RGSHMRILVIAGCSEGFVMPLVPLSWALRAAGHEVLVAASENMGPTVTGAGLPFAPTCPSLDMPEVLSWDREGNRTTMPR 91 (398)
T ss_dssp ---CCEEEEECCSSHHHHGGGHHHHHHHHHTTCEEEEEEEGGGHHHHHHTTCCEEEEESSCCHHHHHSBCTTSCBCCCCS
T ss_pred CCCceEEEEEcCCCcchHHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHhCCCeeEecCCccchHhhhhhhccCccccccc
Q ss_pred ----------------------HHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHHHhcCCCCC
Q 026239 50 ----------------------KALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKIKESSSLRD 107 (241)
Q Consensus 50 ----------------------~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~ir~~~~~~~ 107 (241)
+..+.++...|| +|+.|. ....|.-+.+.+ .
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pD------------------lVv~d~--~~~~~~~~a~~~-------g 144 (398)
T 4fzr_A 92 EEKPLLEHIGRGYGRLVLRMRDEALALAERWKPD------------------LVLTET--YSLTGPLVAATL-------G 144 (398)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCS------------------EEEEET--TCTHHHHHHHHH-------T
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC------------------EEEECc--cccHHHHHHHhh-------C
Q ss_pred CcEEEEc
Q 026239 108 IPVVIMS 114 (241)
Q Consensus 108 ipvIils 114 (241)
+|+|.+.
T Consensus 145 iP~v~~~ 151 (398)
T 4fzr_A 145 IPWIEQS 151 (398)
T ss_dssp CCEEEEC
T ss_pred CCEEEec
No 478
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=41.79 E-value=51 Score=27.16 Aligned_cols=55 Identities=11% Similarity=0.200 Sum_probs=40.1
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhHHH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKPHL 150 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~~l 150 (241)
...++..|+..+ ...+|.+-. . +.+.+.+++++||+.+++-+++++++..++..+
T Consensus 180 ~~av~~ar~~~~-~~~~I~VEV-~-tleea~eA~~aGaD~I~LDn~~~e~l~~av~~l 234 (285)
T 1o4u_A 180 ERAVQEVRKIIP-FTTKIEVEV-E-NLEDALRAVEAGADIVMLDNLSPEEVKDISRRI 234 (285)
T ss_dssp HHHHHHHHTTSC-TTSCEEEEE-S-SHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCceEEEEe-C-CHHHHHHHHHcCCCEEEECCCCHHHHHHHHHHh
Confidence 456777787654 235666543 3 468888999999988889999999987766553
No 479
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=41.56 E-value=1.4e+02 Score=24.95 Aligned_cols=80 Identities=15% Similarity=0.144 Sum_probs=48.9
Q ss_pred cCcceEEEEeCCHHH-HHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCC-
Q 026239 13 ESQFHVLAVDDSIID-RKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGM- 90 (241)
Q Consensus 13 ~~~~~ILiVdd~~~~-~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~- 90 (241)
...++|++.|..|.. ...+...|...|..|+...+..-+. .+. .+|.||+..+---.
T Consensus 145 gk~~~V~v~EsrP~~qG~~la~~L~~~gI~vtli~Dsa~~~-~m~--------------------~vd~VivGAd~i~~n 203 (315)
T 3ecs_A 145 KKRFSVYVTESQPDLSGKKMAKALCHLNVPVTVVLDAAVGY-IME--------------------KADLVIVGAEGVVEN 203 (315)
T ss_dssp TCCEEEEEECCTTTTHHHHHHHHHHTTTCCEEEECGGGHHH-HGG--------------------GCSEEEEECSEECTT
T ss_pred CCeEEEEEecCCCcchHHHHHHHHHHcCCCEEEEehhHHHH-HHH--------------------hCCEEEECceEEecC
Confidence 346889888887753 2345677778899888776644432 221 36799987763222
Q ss_pred ------CHHHHHHHHHhcCCCCCCcEEEEccC
Q 026239 91 ------TGYDLLKKIKESSSLRDIPVVIMSSE 116 (241)
Q Consensus 91 ------~g~~ll~~ir~~~~~~~ipvIils~~ 116 (241)
-|.-.+..+-... ++|+++++..
T Consensus 204 G~v~nkiGT~~iAl~Ak~~---~vP~~V~a~~ 232 (315)
T 3ecs_A 204 GGIINKIGTNQMAVCAKAQ---NKPFYVVAES 232 (315)
T ss_dssp SCEEEETTHHHHHHHHHHT---TCCEEEECCG
T ss_pred CCeeehhhhHHHHHHHHHh---CCCEEEEecc
Confidence 2333333333332 7899998754
No 480
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=41.38 E-value=67 Score=25.46 Aligned_cols=87 Identities=14% Similarity=0.232 Sum_probs=51.5
Q ss_pred ceEEEEeCCHHHHHHHHHHhhcCCC--EEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCH
Q 026239 16 FHVLAVDDSIIDRKLIERLLKTSSY--QVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTG 92 (241)
Q Consensus 16 ~~ILiVdd~~~~~~~l~~~L~~~g~--~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g 92 (241)
.+|..+|-++......+.-++..|. .|. ...|+.+.+. ....||+|++ .||.|
T Consensus 46 ~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~--------------------~~~~~D~Ivi----aGmGg 101 (230)
T 3lec_A 46 DFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFE--------------------EADNIDTITI----CGMGG 101 (230)
T ss_dssp EEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCC--------------------GGGCCCEEEE----EEECH
T ss_pred CEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccc--------------------cccccCEEEE----eCCch
Confidence 4788888888888877777777664 243 3444433321 1124788876 35666
Q ss_pred HHHHHHHHhcC--CCCCCcEEEEccCCChHHHHHHHH
Q 026239 93 YDLLKKIKESS--SLRDIPVVIMSSENVPSRISRCLE 127 (241)
Q Consensus 93 ~~ll~~ir~~~--~~~~ipvIils~~~~~~~~~~~l~ 127 (241)
+++..|-... .......+|+++......+.+++.
T Consensus 102 -~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~~L~ 137 (230)
T 3lec_A 102 -RLIADILNNDIDKLQHVKTLVLQPNNREDDLRKWLA 137 (230)
T ss_dssp -HHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHhCcCCEEEEECCCChHHHHHHHH
Confidence 3333332211 122456788888777777777764
No 481
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=41.19 E-value=53 Score=23.68 Aligned_cols=100 Identities=16% Similarity=0.183 Sum_probs=53.4
Q ss_pred cceEEEEeCC---HHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCC-cccccccEEEEeCCCCCC
Q 026239 15 QFHVLAVDDS---IIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNM-HQEVGVNLVITDYCMPGM 90 (241)
Q Consensus 15 ~~~ILiVdd~---~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~-~~~~~~dlIilD~~mp~~ 90 (241)
..+|.||.-+ ......+.+.|...||.|+-++...+.+ .+.. ..+.. .-...+|++++ ..|..
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l~~~G~~v~~Vnp~~~~i--~G~~---------~y~sl~~l~~~vDlvvi--~vp~~ 88 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV--LGRK---------CYPSVLDIPDKIEVVDL--FVKPK 88 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE--TTEE---------CBSSGGGCSSCCSEEEE--CSCHH
T ss_pred CCEEEEEccCCCCCchHHHHHHHHHHCCCEEEEECCCCCeE--CCee---------ccCCHHHcCCCCCEEEE--EeCHH
Confidence 4678898864 2233344455667899877665432111 1110 00000 01235788877 56776
Q ss_pred CHHHHHHHHHhcCCCCCCcEEEEcc-CCChHHHHHHHHhccc
Q 026239 91 TGYDLLKKIKESSSLRDIPVVIMSS-ENVPSRISRCLEEGAE 131 (241)
Q Consensus 91 ~g~~ll~~ir~~~~~~~ipvIils~-~~~~~~~~~~l~~Ga~ 131 (241)
...++++.+.+.. ++.|++.. ....+....+.+.|+.
T Consensus 89 ~~~~vv~~~~~~g----i~~i~~~~g~~~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 89 LTMEYVEQAIKKG----AKVVWFQYNTYNREASKKADEAGLI 126 (144)
T ss_dssp HHHHHHHHHHHHT----CSEEEECTTCCCHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHcC----CCEEEECCCchHHHHHHHHHHcCCE
Confidence 6677777776653 34555544 3344445555566764
No 482
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=41.11 E-value=1.6e+02 Score=24.85 Aligned_cols=55 Identities=22% Similarity=0.283 Sum_probs=37.3
Q ss_pred cccEEEEeCCCCCCC-HHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhccccccc
Q 026239 77 GVNLVITDYCMPGMT-GYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 77 ~~dlIilD~~mp~~~-g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
.+|+|.+|....... -++.++++++.. ++|||+- .-...+.+..+.++||+.+..
T Consensus 117 Gad~I~ld~a~G~~~~~~~~i~~i~~~~---~~~Vivg-~v~t~e~A~~l~~aGaD~I~V 172 (361)
T 3khj_A 117 GVDVIVLDSAHGHSLNIIRTLKEIKSKM---NIDVIVG-NVVTEEATKELIENGADGIKV 172 (361)
T ss_dssp TCSEEEECCSCCSBHHHHHHHHHHHHHC---CCEEEEE-EECSHHHHHHHHHTTCSEEEE
T ss_pred CcCeEEEeCCCCCcHHHHHHHHHHHHhc---CCcEEEc-cCCCHHHHHHHHHcCcCEEEE
Confidence 366999886543322 247788888753 5788762 224577888899999987754
No 483
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=40.93 E-value=1.2e+02 Score=23.99 Aligned_cols=66 Identities=9% Similarity=0.006 Sum_probs=37.1
Q ss_pred HHHHHHHhhcCCCEEEEECC-----HH---HHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHH
Q 026239 28 RKLIERLLKTSSYQVTTVDS-----GS---KALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKI 99 (241)
Q Consensus 28 ~~~l~~~L~~~g~~v~~~~~-----~~---~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~i 99 (241)
...+...++..||.+..+.+ .. +.++.+... .+|.||+--..+. .....++.+
T Consensus 22 ~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~------------------~vdgiii~~~~~~-~~~~~~~~~ 82 (297)
T 3rot_A 22 FQGAKKAAEELKVDLQILAPPGANDVPKQVQFIESALAT------------------YPSGIATTIPSDT-AFSKSLQRA 82 (297)
T ss_dssp HHHHHHHHHHHTCEEEEECCSSSCCHHHHHHHHHHHHHT------------------CCSEEEECCCCSS-TTHHHHHHH
T ss_pred HHHHHHHHHHhCcEEEEECCCCcCCHHHHHHHHHHHHHc------------------CCCEEEEeCCCHH-HHHHHHHHH
Confidence 34556666778999886652 22 344444333 3556666322221 114567777
Q ss_pred HhcCCCCCCcEEEEccC
Q 026239 100 KESSSLRDIPVVIMSSE 116 (241)
Q Consensus 100 r~~~~~~~ipvIils~~ 116 (241)
+.. .+|||++...
T Consensus 83 ~~~----giPvV~~~~~ 95 (297)
T 3rot_A 83 NKL----NIPVIAVDTR 95 (297)
T ss_dssp HHH----TCCEEEESCC
T ss_pred HHC----CCCEEEEcCC
Confidence 654 6889888643
No 484
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=40.91 E-value=1.1e+02 Score=24.12 Aligned_cols=72 Identities=14% Similarity=0.120 Sum_probs=47.7
Q ss_pred CCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC--CCHHHHHHHHHhcCCCCCCcEEEEc
Q 026239 38 SSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG--MTGYDLLKKIKESSSLRDIPVVIMS 114 (241)
Q Consensus 38 ~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~--~~g~~ll~~ir~~~~~~~ipvIils 114 (241)
.|..+. -+.+..++...+.. ..|.|-+ .|. .-|.+.++.++... +++|++.+.
T Consensus 118 ~g~~~i~G~~t~~e~~~A~~~-------------------Gad~vk~---FPa~~~~G~~~lk~i~~~~--~~ipvvaiG 173 (225)
T 1mxs_A 118 SEIPLLPGISTPSEIMMGYAL-------------------GYRRFKL---FPAEISGGVAAIKAFGGPF--GDIRFCPTG 173 (225)
T ss_dssp CSSCEECEECSHHHHHHHHTT-------------------TCCEEEE---TTHHHHTHHHHHHHHHTTT--TTCEEEEBS
T ss_pred hCCCEEEeeCCHHHHHHHHHC-------------------CCCEEEE---ccCccccCHHHHHHHHhhC--CCCeEEEEC
Confidence 444333 46777787776532 2446655 553 23789999999754 489997665
Q ss_pred cCCChHHHHHHHH-hcccccc
Q 026239 115 SENVPSRISRCLE-EGAEEFF 134 (241)
Q Consensus 115 ~~~~~~~~~~~l~-~Ga~~~l 134 (241)
+ -+.+.+..++. .|++.+.
T Consensus 174 G-I~~~N~~~~l~~~Ga~~v~ 193 (225)
T 1mxs_A 174 G-VNPANVRNYMALPNVMCVG 193 (225)
T ss_dssp S-CCTTTHHHHHHSTTBCCEE
T ss_pred C-CCHHHHHHHHhccCCEEEE
Confidence 4 45667888899 6888774
No 485
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=40.88 E-value=67 Score=28.40 Aligned_cols=54 Identities=11% Similarity=-0.090 Sum_probs=38.1
Q ss_pred cceEEEEeCCHHHHHHHHHHhhcCCCEEE-EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCC
Q 026239 15 QFHVLAVDDSIIDRKLIERLLKTSSYQVT-TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCM 87 (241)
Q Consensus 15 ~~~ILiVdd~~~~~~~l~~~L~~~g~~v~-~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~m 87 (241)
.-+|+.+|-++.....++..++..|..|. ...|..+..... ...||+||+|.-.
T Consensus 126 ~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~-------------------~~~FD~Il~D~Pc 180 (464)
T 3m6w_A 126 KGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAF-------------------GTYFHRVLLDAPC 180 (464)
T ss_dssp CSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHH-------------------CSCEEEEEEECCC
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhc-------------------cccCCEEEECCCc
Confidence 35899999999999999998888776644 345555544333 1248899998643
No 486
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=40.86 E-value=39 Score=29.37 Aligned_cols=44 Identities=11% Similarity=0.067 Sum_probs=28.5
Q ss_pred CCcEEEEccCC--ChHHHHHHHHhc------ccccccCCCC--HHHHHHhhHHH
Q 026239 107 DIPVVIMSSEN--VPSRISRCLEEG------AEEFFLKPVR--LSDLNKLKPHL 150 (241)
Q Consensus 107 ~ipvIils~~~--~~~~~~~~l~~G------a~~~l~KP~~--~~~L~~~~~~l 150 (241)
++-+|+++... ..+.+..|+++| ..=|+-||+. .++..+++...
T Consensus 89 ~vD~V~i~tp~~~H~~~~~~al~aG~~~~~~khVl~EKP~a~~~~e~~~l~~~a 142 (438)
T 3btv_A 89 TIDMIVIAIQVASHYEVVMPLLEFSKNNPNLKYLFVEWALACSLDQAESIYKAA 142 (438)
T ss_dssp SCSEEEECSCHHHHHHHHHHHHHHGGGCTTCCEEEEESSCCSSHHHHHHHHHHH
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHCCCCcccceeEEecCcccCCHHHHHHHHHHH
Confidence 44555555432 356677899999 7888999974 56655554443
No 487
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=40.73 E-value=90 Score=24.14 Aligned_cols=22 Identities=9% Similarity=0.212 Sum_probs=10.5
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEccC
Q 026239 92 GYDLLKKIKESSSLRDIPVVIMSSE 116 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvIils~~ 116 (241)
|..+.+.|.+.+ .-.|.++++.
T Consensus 108 ~~~a~~~L~~~G---~~~i~~i~~~ 129 (272)
T 3o74_A 108 SRQLAASLLSSA---PRSIALIGAR 129 (272)
T ss_dssp HHHHHHHHHTTC---CSEEEEEEEC
T ss_pred HHHHHHHHHHCC---CcEEEEEecC
Confidence 344555555543 3345555543
No 488
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=40.38 E-value=56 Score=26.88 Aligned_cols=79 Identities=13% Similarity=0.175 Sum_probs=44.0
Q ss_pred ceEEEE-eCCHH---HHHHHHHHhhcCCCEEE---EE----CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEe
Q 026239 16 FHVLAV-DDSII---DRKLIERLLKTSSYQVT---TV----DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITD 84 (241)
Q Consensus 16 ~~ILiV-dd~~~---~~~~l~~~L~~~g~~v~---~~----~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD 84 (241)
-+|.+| +|+.. ....+...|+..|..+. .+ .+....+..+.... +|+||+.
T Consensus 142 ~~iaii~~~~~~g~~~~~~~~~~~~~~G~~v~~~~~~~~~~~d~~~~~~~l~~~~------------------~d~v~~~ 203 (364)
T 3lop_A 142 TRIGVLYQEDALGKEAITGVERTLKAHALAITAMASYPRNTANVGPAVDKLLAAD------------------VQAIFLG 203 (364)
T ss_dssp CCEEEEEETTHHHHHHHHHHHHHHHTTTCCCSEEEEECTTSCCCHHHHHHHHHSC------------------CSEEEEE
T ss_pred ceEEEEEeCchhhHHHHHHHHHHHHHcCCcEEEEEEecCCCccHHHHHHHHHhCC------------------CCEEEEe
Confidence 345444 44443 23445666677775432 22 24455666664443 4588884
Q ss_pred CCCCCCCHHHHHHHHHhcCCCCCCcEEEEccC
Q 026239 85 YCMPGMTGYDLLKKIKESSSLRDIPVVIMSSE 116 (241)
Q Consensus 85 ~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~ 116 (241)
. .+.+...+++.+++... .+|++.....
T Consensus 204 ~--~~~~a~~~~~~~~~~g~--~~~~i~~~~~ 231 (364)
T 3lop_A 204 A--TAEPAAQFVRQYRARGG--EAQLLGLSSI 231 (364)
T ss_dssp S--CHHHHHHHHHHHHHTTC--CCEEEECTTS
T ss_pred c--CcHHHHHHHHHHHHcCC--CCeEEEeccC
Confidence 3 23456778888888764 6776544333
No 489
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=40.32 E-value=50 Score=27.20 Aligned_cols=53 Identities=17% Similarity=0.264 Sum_probs=36.6
Q ss_pred HHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCHHHHHHhhH
Q 026239 93 YDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNKLKP 148 (241)
Q Consensus 93 ~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~~~L~~~~~ 148 (241)
...++..|+..+ ...+|.+ +.. +.+.+.+++++|+|.+.+.|+.++.+...+.
T Consensus 183 ~~av~~ar~~~~-~~~~IgV-ev~-t~eea~eA~~aGaD~I~ld~~~~~~~k~av~ 235 (286)
T 1x1o_A 183 GEAVRRAKARAP-HYLKVEV-EVR-SLEELEEALEAGADLILLDNFPLEALREAVR 235 (286)
T ss_dssp HHHHHHHHHHSC-TTSCEEE-EES-SHHHHHHHHHHTCSEEEEESCCHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CCCEEEE-EeC-CHHHHHHHHHcCCCEEEECCCCHHHHHHHHH
Confidence 345677777654 2345544 443 4777889999999888899999988765443
No 490
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=40.28 E-value=25 Score=27.95 Aligned_cols=59 Identities=15% Similarity=0.252 Sum_probs=36.5
Q ss_pred cccEEEEeCCCCCCCH-------HHHHHHHHhcCC--CCCCcEEEEccCCChHHHHHHHHhcccccccC
Q 026239 77 GVNLVITDYCMPGMTG-------YDLLKKIKESSS--LRDIPVVIMSSENVPSRISRCLEEGAEEFFLK 136 (241)
Q Consensus 77 ~~dlIilD~~mp~~~g-------~~ll~~ir~~~~--~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~K 136 (241)
.+|+|++=..-||..| ++-++++|+... ..+++|. +.+.-+.+.+..+.++||+.|+.=
T Consensus 128 ~~D~VlvmsV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~-VdGGI~~~~~~~~~~aGAd~~V~G 195 (231)
T 3ctl_A 128 KADKITVMTVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIE-VDGSCNQATYEKLMAAGADVFIVG 195 (231)
T ss_dssp GCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEE-EESCCSTTTHHHHHHHTCCEEEEC
T ss_pred cCCEEEEeeeccCcCCccccHHHHHHHHHHHHHHhccCCCceEE-EECCcCHHHHHHHHHcCCCEEEEc
Confidence 4678865334455433 555566664321 0145544 555566778889999999988776
No 491
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=40.26 E-value=2.1e+02 Score=25.77 Aligned_cols=74 Identities=14% Similarity=0.065 Sum_probs=45.5
Q ss_pred EECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCC---------CCHHHHHHHHHhcC---CCCCCcEE
Q 026239 44 TVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPG---------MTGYDLLKKIKESS---SLRDIPVV 111 (241)
Q Consensus 44 ~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~---------~~g~~ll~~ir~~~---~~~~ipvI 111 (241)
.+.+.+++........ ..+|.|.+.-..|. .-|++.++.+++.. ...++|||
T Consensus 114 S~ht~eea~~A~~~G~----------------~~aDYv~~Gpvf~T~tK~~~~~~~~G~~~l~~i~~~~~~~~~~~iPvv 177 (540)
T 3nl6_A 114 SVGFPEEVDELSKMGP----------------DMVDYIGVGTLFPTLTKKNPKKAPMGTAGAIRVLDALERNNAHWCRTV 177 (540)
T ss_dssp EECSHHHHHHHHHTCC------------------CCEEEESCCSCCCCCC----CCCHHHHHHHHHHHHHHTTCTTCEEE
T ss_pred ECCCHHHHHHHHHcCC----------------CCCCEEEEcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHhhccCCCCEE
Confidence 5678888877653210 00457777554443 23677777776531 01279999
Q ss_pred EEccCCChHHHHHHHH--------hcccccc
Q 026239 112 IMSSENVPSRISRCLE--------EGAEEFF 134 (241)
Q Consensus 112 ils~~~~~~~~~~~l~--------~Ga~~~l 134 (241)
.+.+- +.+.+..++. .|++++-
T Consensus 178 AIGGI-~~~ni~~v~~~~~~~g~~~GadgvA 207 (540)
T 3nl6_A 178 GIGGL-HPDNIERVLYQCVSSNGKRSLDGIC 207 (540)
T ss_dssp EESSC-CTTTHHHHHHHCBCTTSSCBCSCEE
T ss_pred EEcCC-CHHHHHHHHHhhcccccccCceEEE
Confidence 99876 4566777777 6787763
No 492
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=40.15 E-value=98 Score=25.27 Aligned_cols=41 Identities=20% Similarity=0.306 Sum_probs=24.0
Q ss_pred CcEEEEccCC--ChHHHHHHHHhcccccccCCC--CHHHHHHhhH
Q 026239 108 IPVVIMSSEN--VPSRISRCLEEGAEEFFLKPV--RLSDLNKLKP 148 (241)
Q Consensus 108 ipvIils~~~--~~~~~~~~l~~Ga~~~l~KP~--~~~~L~~~~~ 148 (241)
+-+|+++... ..+.+..+++.|..=|+-||+ +.++..++..
T Consensus 63 ~D~V~i~tp~~~h~~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~ 107 (332)
T 2glx_A 63 VDAVYVSTTNELHREQTLAAIRAGKHVLCEKPLAMTLEDAREMVV 107 (332)
T ss_dssp CCEEEECSCGGGHHHHHHHHHHTTCEEEECSSSCSSHHHHHHHHH
T ss_pred CCEEEEeCChhHhHHHHHHHHHCCCeEEEeCCCcCCHHHHHHHHH
Confidence 3344444332 345566788888877788886 4455544443
No 493
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=40.11 E-value=96 Score=26.73 Aligned_cols=94 Identities=10% Similarity=0.047 Sum_probs=60.9
Q ss_pred HHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHHHhcCCC
Q 026239 26 IDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKIKESSSL 105 (241)
Q Consensus 26 ~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~ir~~~~~ 105 (241)
.....|...-+..|..+.+-.-..++++++.... +|+ +=+.-.+++-+.||+.+...
T Consensus 101 e~~~~L~~~~~~~Gi~~~stpfD~~svd~l~~~~------------------vd~--~KIgS~~~~N~pLL~~va~~--- 157 (385)
T 1vli_A 101 EWILPLLDYCREKQVIFLSTVCDEGSADLLQSTS------------------PSA--FKIASYEINHLPLLKYVARL--- 157 (385)
T ss_dssp GGHHHHHHHHHHTTCEEECBCCSHHHHHHHHTTC------------------CSC--EEECGGGTTCHHHHHHHHTT---
T ss_pred HHHHHHHHHHHHcCCcEEEccCCHHHHHHHHhcC------------------CCE--EEECcccccCHHHHHHHHhc---
Confidence 4456677777788887775555566677774322 223 33344567889999999874
Q ss_pred CCCcEEEEccCCChHHHHHHH----Hhccccccc------CCCCHHHH
Q 026239 106 RDIPVVIMSSENVPSRISRCL----EEGAEEFFL------KPVRLSDL 143 (241)
Q Consensus 106 ~~ipvIils~~~~~~~~~~~l----~~Ga~~~l~------KP~~~~~L 143 (241)
..|||+=|+-...+.+..|. ..|..++++ -|...+++
T Consensus 158 -gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~iiLlhc~s~YPtp~~~~ 204 (385)
T 1vli_A 158 -NRPMIFSTAGAEISDVHEAWRTIRAEGNNQIAIMHCVAKYPAPPEYS 204 (385)
T ss_dssp -CSCEEEECTTCCHHHHHHHHHHHHTTTCCCEEEEEECSSSSCCGGGC
T ss_pred -CCeEEEECCCCCHHHHHHHHHHHHHCCCCcEEEEeccCCCCCChhhc
Confidence 57999999888777766554 346545544 45555555
No 494
>3gx8_A Monothiol glutaredoxin-5, mitochondrial; TRX fold, electron transport, mitochondrion, redox-active center, transit peptide, transport; 1.67A {Saccharomyces cerevisiae}
Probab=40.10 E-value=92 Score=21.65 Aligned_cols=72 Identities=21% Similarity=0.207 Sum_probs=39.8
Q ss_pred HHHHHHHHHHhhcCCCEEEEE--------CCHHHHHHHhcccCCCCCCCCCCCCCCcccccc-cEEEEeCCCCCCCHHHH
Q 026239 25 IIDRKLIERLLKTSSYQVTTV--------DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGV-NLVITDYCMPGMTGYDL 95 (241)
Q Consensus 25 ~~~~~~l~~~L~~~g~~v~~~--------~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~-dlIilD~~mp~~~g~~l 95 (241)
+..+..+..+++.....|..- .-...|.++|.... .++ .....|+.. +-++
T Consensus 3 ~~~~~~v~~~i~~~~Vvvfsk~t~~~p~Cp~C~~ak~lL~~~g----------------v~~~~~~~~dv~~----~~~~ 62 (121)
T 3gx8_A 3 TEIRKAIEDAIESAPVVLFMKGTPEFPKCGFSRATIGLLGNQG----------------VDPAKFAAYNVLE----DPEL 62 (121)
T ss_dssp HHHHHHHHHHHHSCSEEEEESBCSSSBCTTHHHHHHHHHHHHT----------------BCGGGEEEEECTT----CHHH
T ss_pred HHHHHHHHHHhccCCEEEEEeccCCCCCCccHHHHHHHHHHcC----------------CCcceEEEEEecC----CHHH
Confidence 345667788887665444422 23356666664321 111 155666642 2455
Q ss_pred HHHHHhcCCCCCCcEEEEccC
Q 026239 96 LKKIKESSSLRDIPVVIMSSE 116 (241)
Q Consensus 96 l~~ir~~~~~~~ipvIils~~ 116 (241)
...++.....+.+|.|++-+.
T Consensus 63 ~~~l~~~sg~~tvP~vfI~g~ 83 (121)
T 3gx8_A 63 REGIKEFSEWPTIPQLYVNKE 83 (121)
T ss_dssp HHHHHHHHTCCSSCEEEETTE
T ss_pred HHHHHHHhCCCCCCeEEECCE
Confidence 555654334568999998764
No 495
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=39.95 E-value=1.3e+02 Score=23.43 Aligned_cols=20 Identities=15% Similarity=0.013 Sum_probs=12.3
Q ss_pred HHHHHHHHhhcCCCEEEEEC
Q 026239 27 DRKLIERLLKTSSYQVTTVD 46 (241)
Q Consensus 27 ~~~~l~~~L~~~g~~v~~~~ 46 (241)
....+...++..||.+..+.
T Consensus 39 ~~~gi~~~~~~~g~~~~~~~ 58 (296)
T 3brq_A 39 LLFHAARMAEEKGRQLLLAD 58 (296)
T ss_dssp HHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEEe
Confidence 34455566667788776654
No 496
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=39.94 E-value=1.1e+02 Score=25.95 Aligned_cols=81 Identities=12% Similarity=0.084 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHhhcCCCEEEEECCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCCCCCCCHHHHHHHHHhcC
Q 026239 24 SIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYCMPGMTGYDLLKKIKESS 103 (241)
Q Consensus 24 ~~~~~~~l~~~L~~~g~~v~~~~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~mp~~~g~~ll~~ir~~~ 103 (241)
.......|...-+..|..+.+-.-..++++++.....| ++=+.-.+++-+.||+.+...
T Consensus 89 ~~e~~~~L~~~~~~~Gi~~~st~~d~~svd~l~~~~v~--------------------~~KI~S~~~~n~~LL~~va~~- 147 (349)
T 2wqp_A 89 NEEDEIKLKEYVESKGMIFISTLFSRAAALRLQRMDIP--------------------AYKIGSGECNNYPLIKLVASF- 147 (349)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHTCS--------------------CEEECGGGTTCHHHHHHHHTT-
T ss_pred CHHHHHHHHHHHHHhCCeEEEeeCCHHHHHHHHhcCCC--------------------EEEECcccccCHHHHHHHHhc-
Q ss_pred CCCCCcEEEEccCCChHHHHHHHHh
Q 026239 104 SLRDIPVVIMSSENVPSRISRCLEE 128 (241)
Q Consensus 104 ~~~~ipvIils~~~~~~~~~~~l~~ 128 (241)
..|||+=|+-...+.+..|.+.
T Consensus 148 ---gkPviLstGmat~~Ei~~Ave~ 169 (349)
T 2wqp_A 148 ---GKPIILSTGMNSIESIKKSVEI 169 (349)
T ss_dssp ---CSCEEEECTTCCHHHHHHHHHH
T ss_pred ---CCeEEEECCCCCHHHHHHHHHH
No 497
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=39.91 E-value=66 Score=26.21 Aligned_cols=102 Identities=5% Similarity=-0.136 Sum_probs=0.0
Q ss_pred eEEEEeCCHH----HHHHHHHHhhcCCCEEEEE-------CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeC
Q 026239 17 HVLAVDDSII----DRKLIERLLKTSSYQVTTV-------DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDY 85 (241)
Q Consensus 17 ~ILiVdd~~~----~~~~l~~~L~~~g~~v~~~-------~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~ 85 (241)
+|.+|-++.. ....+...|+..|..+... .+....+..+....|| +||+
T Consensus 140 ~iaii~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d------------------~v~~-- 199 (356)
T 3ipc_A 140 KVAIIHDKTPYGQGLADETKKAANAAGVTEVMYEGVNVGDKDFSALISKMKEAGVS------------------IIYW-- 199 (356)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHHTTCCCSEEEECCTTCCCCHHHHHHHHHTTCC------------------EEEE--
T ss_pred EEEEEeCCChHHHHHHHHHHHHHHHcCCEEEEEEeeCCCCCCHHHHHHHHHhcCCC------------------EEEE--
Q ss_pred CCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccccccCCCCH
Q 026239 86 CMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRL 140 (241)
Q Consensus 86 ~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~~l~KP~~~ 140 (241)
+..+.+...+++.+++... .+|++...+..+......+-...-.-|+.-|+.+
T Consensus 200 ~~~~~~a~~~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~ 252 (356)
T 3ipc_A 200 GGLHTEAGLIIRQAADQGL--KAKLVSGDGIVSNELASIAGDAVEGTLNTFGPDP 252 (356)
T ss_dssp ESCHHHHHHHHHHHHHHTC--CCEEEECGGGCSHHHHHHHGGGGTTCEEEESCCG
T ss_pred ccCchHHHHHHHHHHHCCC--CCcEEEeccccCHHHHHHhhHHhCCEEEEecCCC
No 498
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=39.79 E-value=13 Score=30.73 Aligned_cols=41 Identities=29% Similarity=0.549 Sum_probs=0.0
Q ss_pred HHHHHHHHHhcCCCCCCcEE--EEccCCChHHHHHHHHhccccccc
Q 026239 92 GYDLLKKIKESSSLRDIPVV--IMSSENVPSRISRCLEEGAEEFFL 135 (241)
Q Consensus 92 g~~ll~~ir~~~~~~~ipvI--ils~~~~~~~~~~~l~~Ga~~~l~ 135 (241)
++++++.++... ++||| +..+-.+.+.+.+++..||++++.
T Consensus 195 ~~~~i~~i~~~~---~iPvi~~a~GGI~~~~d~~~~~~~GadgV~v 237 (305)
T 2nv1_A 195 PYELLLQIKKDG---KLPVVNFAAGGVATPADAALMMQLGADGVFV 237 (305)
T ss_dssp CHHHHHHHHHHT---SCSSCEEBCSCCCSHHHHHHHHHTTCSCEEE
T ss_pred cHHHHHHHHHhc---CCCEEEEeccCCCCHHHHHHHHHcCCCEEEE
No 499
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=39.75 E-value=1.2e+02 Score=24.59 Aligned_cols=68 Identities=15% Similarity=0.133 Sum_probs=0.0
Q ss_pred EEEeCCCCCCCHHHHHHHHHhcCCCCCCcEEEEccCCChHHHHHHHHhcccc--cccCCCCHHHHHHhhHHHHH
Q 026239 81 VITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRISRCLEEGAEE--FFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 81 IilD~~mp~~~g~~ll~~ir~~~~~~~ipvIils~~~~~~~~~~~l~~Ga~~--~l~KP~~~~~L~~~~~~l~~ 152 (241)
|++|-..-+ .+++.++.++... ++||+.=-.-.++..+.++..+||+. .+..-++..+|..++.....
T Consensus 98 Vltd~~~f~-Gs~~~L~~ir~~v---~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L~~~~l~~l~~~a~~ 167 (272)
T 3tsm_A 98 VLTDTPSFQ-GAPEFLTAARQAC---SLPALRKDFLFDPYQVYEARSWGADCILIIMASVDDDLAKELEDTAFA 167 (272)
T ss_dssp EECCSTTTC-CCHHHHHHHHHTS---SSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTSCHHHHHHHHHHHHH
T ss_pred EeccccccC-CCHHHHHHHHHhc---CCCEEECCccCCHHHHHHHHHcCCCEEEEcccccCHHHHHHHHHHHHH
No 500
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=39.67 E-value=64 Score=24.71 Aligned_cols=89 Identities=12% Similarity=0.131 Sum_probs=0.0
Q ss_pred CCHHHHHHHhcccCCCCCCCCCCCCCCcccccccEEEEeCC-CCC-CCHHHHHHHHHhcCCCCCCcEEEEccCCChH-HH
Q 026239 46 DSGSKALEFLGLHEDDGQSSHSVYPNMHQEVGVNLVITDYC-MPG-MTGYDLLKKIKESSSLRDIPVVIMSSENVPS-RI 122 (241)
Q Consensus 46 ~~~~~al~~l~~~~~d~~~~~~~~~~~~~~~~~dlIilD~~-mp~-~~g~~ll~~ir~~~~~~~ipvIils~~~~~~-~~ 122 (241)
.+..++++.+.....| .+.+.++|-. -+. ..|+++++.|++.. +.|+.+...-.+.. .+
T Consensus 16 ~~~~~~~~~~~~~G~~---------------~i~~~~~dg~~~~~~~~g~~~i~~i~~~~---~~~~~v~l~v~d~~~~i 77 (220)
T 2fli_A 16 ANFASELARIEETDAE---------------YVHIDIMDGQFVPNISFGADVVASMRKHS---KLVFDCHLMVVDPERYV 77 (220)
T ss_dssp GGHHHHHHHHHHTTCC---------------EEEEEEEBSSSSSCBCBCHHHHHHHHTTC---CSEEEEEEESSSGGGGH
T ss_pred HHHHHHHHHHHHcCCC---------------EEEEEeecCCCCCccccCHHHHHHHHHhC---CCCEEEEEeecCHHHHH
Q ss_pred HHHHHhcccccccCCCCHHHHHHhhHHHHH
Q 026239 123 SRCLEEGAEEFFLKPVRLSDLNKLKPHLMK 152 (241)
Q Consensus 123 ~~~l~~Ga~~~l~KP~~~~~L~~~~~~l~~ 152 (241)
..+.++|++.+..-....+.+..++..+..
T Consensus 78 ~~~~~~gad~v~vh~~~~~~~~~~~~~~~~ 107 (220)
T 2fli_A 78 EAFAQAGADIMTIHTESTRHIHGALQKIKA 107 (220)
T ss_dssp HHHHHHTCSEEEEEGGGCSCHHHHHHHHHH
T ss_pred HHHHHcCCCEEEEccCccccHHHHHHHHHH
Done!