Query 026241
Match_columns 241
No_of_seqs 126 out of 248
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 05:27:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026241.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026241hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4287 Pectin acetylesterase 100.0 5.9E-93 1.3E-97 642.8 14.0 239 1-239 164-402 (402)
2 PF03283 PAE: Pectinacetyleste 100.0 2.4E-70 5.1E-75 508.3 13.6 218 1-223 144-361 (361)
3 PRK10115 protease 2; Provision 90.3 0.15 3.1E-06 51.9 1.8 30 2-31 513-542 (686)
4 PF00326 Peptidase_S9: Prolyl 89.8 0.099 2.2E-06 44.1 0.0 53 2-60 53-105 (213)
5 PF01764 Lipase_3: Lipase (cla 89.4 0.28 6E-06 38.4 2.4 52 13-70 64-116 (140)
6 PRK10566 esterase; Provisional 84.6 0.67 1.4E-05 39.6 2.2 40 10-53 104-143 (249)
7 cd00741 Lipase Lipase. Lipase 80.8 1.9 4E-05 34.7 3.4 46 3-48 16-64 (153)
8 COG1506 DAP2 Dipeptidyl aminop 75.7 1.5 3.3E-05 43.9 1.7 27 7-33 467-493 (620)
9 PLN02408 phospholipase A1 73.8 4.4 9.4E-05 38.4 4.1 52 14-71 201-252 (365)
10 PLN02802 triacylglycerol lipas 73.3 4.5 9.7E-05 39.9 4.1 51 14-70 331-381 (509)
11 PF10340 DUF2424: Protein of u 70.9 3.2 7E-05 39.4 2.5 25 12-36 194-218 (374)
12 COG1770 PtrB Protease II [Amin 67.4 2 4.3E-05 43.5 0.4 29 2-30 516-546 (682)
13 PF00135 COesterase: Carboxyle 66.1 2 4.3E-05 40.9 0.1 23 11-33 206-228 (535)
14 TIGR02821 fghA_ester_D S-formy 65.6 2.5 5.4E-05 37.5 0.6 25 12-36 137-161 (275)
15 PLN02454 triacylglycerol lipas 65.0 8.1 0.00017 37.2 3.9 52 14-71 229-282 (414)
16 TIGR01840 esterase_phb esteras 65.0 3.1 6.7E-05 35.2 1.0 20 12-31 94-113 (212)
17 cd00519 Lipase_3 Lipase (class 63.6 6.5 0.00014 33.7 2.8 35 13-48 128-162 (229)
18 PLN03037 lipase class 3 family 63.6 8.7 0.00019 38.1 3.9 54 12-71 317-370 (525)
19 KOG1209 1-Acyl dihydroxyaceton 63.0 2 4.3E-05 38.4 -0.5 62 9-74 4-76 (289)
20 cd07198 Patatin Patatin-like p 62.9 3.5 7.6E-05 34.0 1.0 29 2-33 18-46 (172)
21 PF07859 Abhydrolase_3: alpha/ 62.4 4.9 0.00011 33.3 1.8 26 12-37 70-95 (211)
22 KOG1515 Arylacetamide deacetyl 62.0 7.3 0.00016 36.4 3.0 32 4-36 158-189 (336)
23 PF12695 Abhydrolase_5: Alpha/ 60.8 4 8.7E-05 31.3 0.9 23 10-32 58-80 (145)
24 PF03403 PAF-AH_p_II: Platelet 59.6 4.1 8.8E-05 38.5 0.9 17 12-28 227-243 (379)
25 COG0657 Aes Esterase/lipase [L 58.7 8.3 0.00018 34.6 2.7 26 12-37 151-176 (312)
26 KOG3847 Phospholipase A2 (plat 57.6 8.3 0.00018 36.3 2.5 33 86-120 267-299 (399)
27 cd00312 Esterase_lipase Estera 56.5 4.5 9.8E-05 38.7 0.6 24 10-33 173-196 (493)
28 PLN02442 S-formylglutathione h 54.5 5.3 0.00011 35.7 0.7 23 11-33 141-163 (283)
29 PF07819 PGAP1: PGAP1-like pro 54.1 4.3 9.4E-05 35.4 0.1 24 8-31 80-103 (225)
30 KOG4569 Predicted lipase [Lipi 54.0 17 0.00036 33.8 3.9 54 12-71 170-224 (336)
31 cd07224 Pat_like Patatin-like 53.1 6.1 0.00013 34.6 0.9 30 3-33 20-49 (233)
32 PRK10162 acetyl esterase; Prov 52.0 8.6 0.00019 35.0 1.7 27 11-37 152-178 (318)
33 TIGR02747 TraV type IV conjuga 50.6 5.9 0.00013 32.8 0.3 9 15-23 13-21 (144)
34 PRK10439 enterobactin/ferric e 50.5 6.3 0.00014 37.7 0.6 22 10-31 285-306 (411)
35 PF01734 Patatin: Patatin-like 50.4 7.9 0.00017 30.7 1.1 17 15-31 29-45 (204)
36 cd07204 Pat_PNPLA_like Patatin 50.3 7.3 0.00016 34.4 0.9 29 3-31 20-49 (243)
37 PF12697 Abhydrolase_6: Alpha/ 49.7 8.3 0.00018 30.7 1.1 37 13-53 66-102 (228)
38 PF02230 Abhydrolase_2: Phosph 49.0 9.4 0.0002 32.4 1.3 47 2-54 95-141 (216)
39 PLN02211 methyl indole-3-aceta 48.9 8 0.00017 34.2 0.9 23 12-34 86-108 (273)
40 cd00707 Pancreat_lipase_like P 48.7 17 0.00036 32.6 3.0 39 12-53 111-149 (275)
41 PF00756 Esterase: Putative es 48.6 8.7 0.00019 32.8 1.1 19 15-33 117-135 (251)
42 COG4947 Uncharacterized protei 48.5 6.8 0.00015 33.9 0.4 22 15-40 103-124 (227)
43 PRK13604 luxD acyl transferase 47.2 16 0.00034 33.8 2.6 62 98-168 194-266 (307)
44 PLN02965 Probable pheophorbida 46.6 15 0.00033 31.5 2.3 20 13-32 72-91 (255)
45 cd07222 Pat_PNPLA4 Patatin-lik 46.5 9.8 0.00021 33.6 1.1 28 4-31 21-49 (246)
46 PF05728 UPF0227: Uncharacteri 45.9 11 0.00024 32.1 1.3 22 14-39 60-81 (187)
47 cd07218 Pat_iPLA2 Calcium-inde 45.8 10 0.00022 33.7 1.1 16 16-31 33-48 (245)
48 PF06821 Ser_hydrolase: Serine 45.8 13 0.00029 31.0 1.8 20 13-32 55-74 (171)
49 TIGR03056 bchO_mg_che_rel puta 45.5 18 0.00039 30.6 2.6 21 13-33 95-115 (278)
50 PF00975 Thioesterase: Thioest 42.2 23 0.00051 29.5 2.8 36 14-50 67-102 (229)
51 PF00561 Abhydrolase_1: alpha/ 41.3 13 0.00028 30.3 1.0 24 15-38 46-69 (230)
52 PF12070 DUF3550: Protein of u 41.2 40 0.00088 33.4 4.5 23 92-114 365-387 (513)
53 PLN02310 triacylglycerol lipas 40.2 35 0.00075 32.9 3.8 52 13-71 209-260 (405)
54 PRK05077 frsA fermentation/res 39.1 32 0.00069 32.7 3.4 20 11-30 263-282 (414)
55 cd07207 Pat_ExoU_VipD_like Exo 38.6 15 0.00033 30.4 1.0 26 3-31 20-45 (194)
56 PLN02571 triacylglycerol lipas 38.3 46 0.001 32.1 4.3 53 14-72 227-287 (413)
57 PLN02324 triacylglycerol lipas 37.9 44 0.00095 32.3 4.1 52 14-71 216-276 (415)
58 cd07220 Pat_PNPLA2 Patatin-lik 37.4 16 0.00034 32.7 0.9 17 15-31 38-54 (249)
59 TIGR03611 RutD pyrimidine util 35.2 19 0.0004 29.8 1.0 22 12-33 79-100 (257)
60 PF07829 Toxin_14: Alpha-A con 34.3 20 0.00043 20.7 0.7 9 226-235 5-13 (26)
61 PRK00870 haloalkane dehalogena 34.3 30 0.00065 30.5 2.3 36 13-52 115-150 (302)
62 COG0596 MhpC Predicted hydrola 33.6 24 0.00052 28.0 1.4 24 15-38 90-113 (282)
63 COG1075 LipA Predicted acetylt 33.4 26 0.00056 32.4 1.7 27 9-39 123-149 (336)
64 cd07205 Pat_PNPLA6_PNPLA7_NTE1 33.0 20 0.00044 29.3 0.9 27 2-31 20-46 (175)
65 cd07228 Pat_NTE_like_bacteria 32.8 20 0.00044 29.5 0.9 25 3-30 21-45 (175)
66 PRK10349 carboxylesterase BioH 32.6 21 0.00045 30.4 1.0 26 13-38 74-99 (256)
67 COG4814 Uncharacterized protei 32.5 20 0.00042 32.8 0.8 28 13-40 136-165 (288)
68 PRK04940 hypothetical protein; 32.3 25 0.00054 30.1 1.3 23 13-39 60-82 (180)
69 cd07209 Pat_hypo_Ecoli_Z1214_l 32.0 22 0.00047 30.5 1.0 28 2-32 18-45 (215)
70 TIGR01250 pro_imino_pep_2 prol 31.6 22 0.00047 29.8 0.9 21 13-33 96-116 (288)
71 PF03583 LIP: Secretory lipase 31.6 31 0.00068 31.2 1.9 53 3-56 60-115 (290)
72 PLN02824 hydrolase, alpha/beta 30.2 26 0.00056 30.6 1.2 24 13-36 102-125 (294)
73 cd07208 Pat_hypo_Ecoli_yjju_li 29.5 24 0.00053 31.0 0.9 28 2-31 18-45 (266)
74 PLN00021 chlorophyllase 29.5 22 0.00048 32.6 0.6 24 12-35 125-148 (313)
75 TIGR03695 menH_SHCHC 2-succiny 29.1 24 0.00052 28.5 0.7 24 12-35 69-92 (251)
76 KOG4627 Kynurenine formamidase 29.0 33 0.00072 30.6 1.6 28 8-35 131-158 (270)
77 PF06028 DUF915: Alpha/beta hy 27.8 36 0.00077 30.5 1.6 29 12-40 102-132 (255)
78 TIGR03712 acc_sec_asp2 accesso 27.5 35 0.00075 33.8 1.6 36 8-48 353-388 (511)
79 TIGR00300 conserved hypothetic 27.0 58 0.0013 31.3 2.9 38 3-47 331-368 (407)
80 TIGR03343 biphenyl_bphD 2-hydr 26.8 38 0.00083 29.0 1.6 27 12-38 100-126 (282)
81 KOG2237 Predicted serine prote 26.1 22 0.00047 36.3 -0.1 24 2-25 538-561 (712)
82 PLN02753 triacylglycerol lipas 26.0 88 0.0019 31.2 4.1 54 12-71 311-370 (531)
83 cd07210 Pat_hypo_W_succinogene 25.8 32 0.0007 29.8 1.0 26 3-31 21-46 (221)
84 cd07225 Pat_PNPLA6_PNPLA7 Pata 25.6 32 0.00069 31.5 0.9 29 2-33 35-63 (306)
85 PLN02733 phosphatidylcholine-s 25.3 40 0.00087 32.7 1.6 21 12-32 161-181 (440)
86 TIGR03100 hydr1_PEP hydrolase, 25.1 37 0.0008 29.9 1.2 19 13-31 100-118 (274)
87 PLN02298 hydrolase, alpha/beta 24.9 30 0.00066 30.9 0.6 19 14-32 135-153 (330)
88 PLN00413 triacylglycerol lipas 24.8 61 0.0013 31.9 2.7 24 13-36 284-307 (479)
89 cd01819 Patatin_and_cPLA2 Pata 24.8 35 0.00076 27.7 0.9 28 3-31 19-46 (155)
90 TIGR02427 protocat_pcaD 3-oxoa 24.3 38 0.00083 27.4 1.1 21 13-33 79-99 (251)
91 PF07643 DUF1598: Protein of u 24.1 75 0.0016 23.9 2.5 44 6-49 7-52 (84)
92 cd07223 Pat_PNPLA5-mammals Pat 24.0 53 0.0012 31.6 2.1 15 17-31 45-59 (405)
93 KOG2214 Predicted esterase of 23.9 32 0.0007 34.1 0.6 25 16-40 205-233 (543)
94 TIGR03101 hydr2_PEP hydrolase, 23.7 52 0.0011 29.5 1.9 48 12-70 98-145 (266)
95 PRK11460 putative hydrolase; P 23.4 39 0.00085 29.1 1.0 20 12-31 102-121 (232)
96 cd07230 Pat_TGL4-5_like Triacy 23.3 37 0.0008 32.7 0.9 28 3-33 94-121 (421)
97 KOG3493 Ubiquitin-like protein 23.2 48 0.001 24.0 1.2 18 34-51 6-23 (73)
98 PLN02894 hydrolase, alpha/beta 23.1 68 0.0015 30.2 2.6 40 13-55 176-215 (402)
99 COG2021 MET2 Homoserine acetyl 23.0 45 0.00097 31.7 1.4 40 9-48 143-186 (368)
100 PF10503 Esterase_phd: Esteras 22.9 37 0.0008 29.7 0.8 35 2-40 86-120 (220)
101 PF00086 Thyroglobulin_1: Thyr 22.6 90 0.0019 21.8 2.6 27 159-185 6-32 (68)
102 PLN02932 3-ketoacyl-CoA syntha 22.6 75 0.0016 31.2 2.9 39 8-46 195-236 (478)
103 PF03575 Peptidase_S51: Peptid 22.4 34 0.00073 27.7 0.4 11 15-25 70-80 (154)
104 TIGR01392 homoserO_Ac_trn homo 21.9 50 0.0011 30.0 1.5 24 13-36 126-150 (351)
105 PF13130 DUF3952: Domain of un 21.4 33 0.00072 26.8 0.1 37 15-53 2-40 (107)
106 PF06658 DUF1168: Protein of u 21.3 33 0.00072 28.3 0.1 16 16-31 25-40 (142)
107 PF02960 K1: K1 glycoprotein; 21.1 35 0.00077 27.2 0.2 23 182-215 92-114 (130)
108 PLN02679 hydrolase, alpha/beta 20.8 47 0.001 30.5 1.1 17 13-29 155-171 (360)
109 COG1239 ChlI Mg-chelatase subu 20.8 59 0.0013 31.5 1.7 31 202-234 50-80 (423)
110 PRK10279 hypothetical protein; 20.8 46 0.001 30.5 1.0 27 2-31 25-51 (300)
111 PLN02719 triacylglycerol lipas 20.6 1.3E+02 0.0027 30.1 4.0 52 13-70 298-355 (518)
112 PF03193 DUF258: Protein of un 20.5 59 0.0013 27.2 1.5 90 8-102 32-144 (161)
113 PF05677 DUF818: Chlamydia CHL 20.5 81 0.0018 29.9 2.5 39 11-52 213-254 (365)
No 1
>KOG4287 consensus Pectin acetylesterase and similar proteins [Cell wall/membrane/envelope biogenesis]
Probab=100.00 E-value=5.9e-93 Score=642.76 Aligned_cols=239 Identities=72% Similarity=1.297 Sum_probs=235.8
Q ss_pred ChhHHHhhhhhhhhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEeccccccccCCCCCchhhHHhhhhchhhhccccc
Q 026241 1 MDDLMSKGMRHAHQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGLFLDAVDVSGGHTLRNLYSGVVGLQGVQN 80 (241)
Q Consensus 1 i~dLl~~Gl~~A~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~~v~l~~~~~ 80 (241)
|+|||+|||++|+++|||||||||||++||||+||++||++++||||+|||||||.+|+.|+.+++.+|.++|++||+.+
T Consensus 164 ~~eLl~kGms~Ak~alLsGcSAGGLa~iLhCD~Fr~~lp~~t~VKClSDaG~FLd~~dv~g~~t~~~~~~~vv~lqg~~k 243 (402)
T KOG4287|consen 164 MDELLAKGMSNAKQALLSGCSAGGLASILHCDEFRELLPPTTKVKCLSDAGFFLDAKDVSGGPTLRSYYAGVVTLQGLQK 243 (402)
T ss_pred HHHHHHhhhhHHHHHHhhcCCccchhheeehHHHHhhCCCCceeEEecccceeeecccccCCcchhhhhhhheeeecccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCchhhhhhccCCCeeeehhhhhHHHHhhccCCCCCCCCCCccccccCCCCCCHHHHHHHHHHHHH
Q 026241 81 NLPRICTNHLDPTSCFFPQNIIRQVRTPLFILNAAYDSWQIQSSLAPPSADPHGHWHDCRLNHAKCSASQIRFLQGFRNQ 160 (241)
Q Consensus 81 ~lp~~C~~~~~~~~Cffpq~~~~~I~tP~Fi~ns~YD~wQl~~~l~~~~~dp~g~w~~C~~~~~~C~~~q~~~lq~fr~~ 160 (241)
+||+.|+++++||+||||||+++.|+||+||+|++||+|||++.|+|+++||+|.|+.|++|...|+++|++++|+||.+
T Consensus 244 ~Lp~~Ct~~~~p~~CfFpq~v~~~irtP~F~vN~afD~wQi~~~laP~s~d~~g~w~~ckl~~~~c~~~q~~~~qgFr~~ 323 (402)
T KOG4287|consen 244 NLPQSCTSHLEPSLCFFPQYVLKTIRTPVFLVNAAFDSWQIQNSLAPTSADPSGSWKYCKLNHRECTAAQIDFLQGFRPQ 323 (402)
T ss_pred cCCHHHHhcCCchhhcchHHHHhhcCCceEehhhhhhHHhccCCCCCCCCCcccchhhcccccccCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcccCCCCceEEEcCccccccccccCccccCCCcccCCchHHhhhcccccccccceecCCCCCCCCCCCCCccc
Q 026241 161 VLKAVRGFSMSKQNGLFINSCFAHCQTERQDTWFADDSPVVGNKAIAIAVGDWYFDRSGIKIVDCPYPCDKTCHNLVFQ 239 (241)
Q Consensus 161 ~~~~l~~~~~~~~~G~F~~SC~~Hc~~~~~~~W~~~~~p~v~~~tia~Al~~W~f~r~~~~~iDc~yPcNptC~~~~~~ 239 (241)
|+.++..+.++...|+||+||++|||++.++||+++++|+++|||||+|||||||+|..+|+|||||||||||||+++.
T Consensus 324 ml~a~~~f~~~~~~g~finsc~aHCq~~~~~tW~~~~sp~i~~k~iA~aVgdWyf~R~~vklIDCPyPCn~tC~nl~~~ 402 (402)
T KOG4287|consen 324 MLDAVKIFSSSKQNGLFINSCFAHCQTERQDTWFADDSPAIKNKTIAEAVGDWYFDRAKVKLIDCPYPCNPTCHNLSFE 402 (402)
T ss_pred HHHHhhhheecccCCeeechHHHhhcccccccccCCCCccccCchhhhhhcceecccceeeeccCCCCCCCCCccccCC
Confidence 9999999988899999999999999999999999999999999999999999999998899999999999999999874
No 2
>PF03283 PAE: Pectinacetylesterase
Probab=100.00 E-value=2.4e-70 Score=508.27 Aligned_cols=218 Identities=54% Similarity=1.005 Sum_probs=211.2
Q ss_pred ChhHHHhhhhhhhhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEeccccccccCCCCCchhhHHhhhhchhhhccccc
Q 026241 1 MDDLMSKGMRHAHQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGLFLDAVDVSGGHTLRNLYSGVVGLQGVQN 80 (241)
Q Consensus 1 i~dLl~~Gl~~A~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~~v~l~~~~~ 80 (241)
|++|+.+||.+|++|||+||||||+||++|+|+||++||++++|++++|||||||.++++|.+.++.+|+.++.+|++++
T Consensus 144 l~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f~d~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (361)
T PF03283_consen 144 LDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFFLDNPDYSGNPCIRSFYSDVVGLQNWSK 223 (361)
T ss_pred HHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEeccccccccccCcccchhHHHHHHHHHHHHHhhc
Confidence 57899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCccccccCCCCCCCchhhhhhccCCCeeeehhhhhHHHHhhccCCCCCCCCCCccccccCCCCCCHHHHHHHHHHHHH
Q 026241 81 NLPRICTNHLDPTSCFFPQNIIRQVRTPLFILNAAYDSWQIQSSLAPPSADPHGHWHDCRLNHAKCSASQIRFLQGFRNQ 160 (241)
Q Consensus 81 ~lp~~C~~~~~~~~Cffpq~~~~~I~tP~Fi~ns~YD~wQl~~~l~~~~~dp~g~w~~C~~~~~~C~~~q~~~lq~fr~~ 160 (241)
++|++|++.+++. ||||||++|+|+||+|||||+||+|||+++|+|+. +.|.+|+.++.+|+++||++||+||++
T Consensus 224 ~~p~~C~~~~~~~-C~f~q~~~~~I~tPlFivns~YD~wQl~~il~p~~----~~w~~c~~~~~~Cs~~Ql~~lq~fr~~ 298 (361)
T PF03283_consen 224 SLPESCVAQYDPE-CFFPQYLYPYIKTPLFIVNSLYDSWQLQNILVPPS----GSWISCKNDLPPCSPSQLDYLQGFRSE 298 (361)
T ss_pred cCCHhHHhccCcc-ccchHHHHhhcCcceeeehhhhCHHHhhcccCCCc----ccccccccCCCCCCHHHHHHHHHHHHH
Confidence 9999999888666 99999999999999999999999999999999864 999999999999999999999999999
Q ss_pred HHHHHhcccCCCCceEEEcCccccccccccCccccCCCcccCCchHHhhhcccccccccceec
Q 026241 161 VLKAVRGFSMSKQNGLFINSCFAHCQTERQDTWFADDSPVVGNKAIAIAVGDWYFDRSGIKIV 223 (241)
Q Consensus 161 ~~~~l~~~~~~~~~G~F~~SC~~Hc~~~~~~~W~~~~~p~v~~~tia~Al~~W~f~r~~~~~i 223 (241)
|+++|+++.+++++|+|++||++|||++.+++|+++++|+|+|+||++||+||||+|+.+|.|
T Consensus 299 ~~~aL~~~~~~~~~G~Fi~SC~~Hcq~~~~~~W~~~~~p~v~g~tia~Av~dW~~~r~~~~~~ 361 (361)
T PF03283_consen 299 MLDALKNVSNSPNWGVFIPSCFAHCQSESSDTWNSPDSPRVNGKTIAEAVGDWYFSRSEVKKI 361 (361)
T ss_pred HHHHHHHhhcCCCCeEECccchhhcccccCCcccCCCcccCCCEEHHHHHHHHHhcccccccC
Confidence 999999999999999999999999999999999988899999999999999999999988765
No 3
>PRK10115 protease 2; Provisional
Probab=90.35 E-value=0.15 Score=51.86 Aligned_cols=30 Identities=27% Similarity=0.286 Sum_probs=25.4
Q ss_pred hhHHHhhhhhhhhhhhcccChhhHHHHHhH
Q 026241 2 DDLMSKGMRHAHQALLSGCSAGGLASILHC 31 (241)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGl~~~l~~ 31 (241)
+.|+.+|+.+.+++.+.|.||||+-+..-+
T Consensus 513 ~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~ 542 (686)
T PRK10115 513 DALLKLGYGSPSLCYGMGGSAGGMLMGVAI 542 (686)
T ss_pred HHHHHcCCCChHHeEEEEECHHHHHHHHHH
Confidence 568888999999999999999998665433
No 4
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=89.75 E-value=0.099 Score=44.12 Aligned_cols=53 Identities=19% Similarity=0.298 Sum_probs=33.5
Q ss_pred hhHHHhhhhhhhhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEeccccccccCCCCC
Q 026241 2 DDLMSKGMRHAHQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGLFLDAVDVS 60 (241)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~ 60 (241)
+.|..++.-+.++|.+.|.|+||..|++-+-. .|...+ .+++.+|+ .|...+.
T Consensus 53 ~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~----~~~~f~-a~v~~~g~-~d~~~~~ 105 (213)
T PF00326_consen 53 EYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ----HPDRFK-AAVAGAGV-SDLFSYY 105 (213)
T ss_dssp HHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH----TCCGSS-EEEEESE--SSTTCSB
T ss_pred HHHhccccccceeEEEEcccccccccchhhcc----cceeee-eeecccee-cchhccc
Confidence 45556677788999999999999988876553 233211 23455564 3554443
No 5
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=89.39 E-value=0.28 Score=38.43 Aligned_cols=52 Identities=23% Similarity=0.331 Sum_probs=33.0
Q ss_pred hhhhhcccChhhH-HHHHhHHHHhhhCCCcceEEEeccccccccCCCCCchhhHHhhhh
Q 026241 13 HQALLSGCSAGGL-ASILHCDEFRDFFPRTTRVKCLSDAGLFLDAVDVSGGHTLRNLYS 70 (241)
Q Consensus 13 ~~viLsG~SAGGl-~~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~ 70 (241)
.+++++|+|-||. |+++..+...........+++++=++ +.-|+..+...++
T Consensus 64 ~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~------P~~~~~~~~~~~~ 116 (140)
T PF01764_consen 64 YSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGA------PRVGNSAFAKWYD 116 (140)
T ss_dssp SEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-------S--BEHHHHHHHH
T ss_pred ccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCC------ccccCHHHHHHHH
Confidence 5899999999986 77777777666555455666666433 2235555555555
No 6
>PRK10566 esterase; Provisional
Probab=84.57 E-value=0.67 Score=39.64 Aligned_cols=40 Identities=23% Similarity=0.332 Sum_probs=25.9
Q ss_pred hhhhhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEecccccc
Q 026241 10 RHAHQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGLF 53 (241)
Q Consensus 10 ~~A~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGfF 53 (241)
-+.+++.|.|.|+||.-++.-+. .-|.-..+..+..+|+|
T Consensus 104 ~~~~~i~v~G~S~Gg~~al~~~~----~~~~~~~~~~~~~~~~~ 143 (249)
T PRK10566 104 LLDDRLAVGGASMGGMTALGIMA----RHPWVKCVASLMGSGYF 143 (249)
T ss_pred cCccceeEEeecccHHHHHHHHH----hCCCeeEEEEeeCcHHH
Confidence 45678999999999999985432 23332233345556665
No 7
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=80.81 E-value=1.9 Score=34.65 Aligned_cols=46 Identities=22% Similarity=0.208 Sum_probs=27.4
Q ss_pred hHHHhhhh--hhhhhhhcccChhhHHHHHhHHHHhhhCC-CcceEEEec
Q 026241 3 DLMSKGMR--HAHQALLSGCSAGGLASILHCDEFRDFFP-RTTRVKCLS 48 (241)
Q Consensus 3 dLl~~Gl~--~A~~viLsG~SAGGl~~~l~~D~~~~~Lp-~~~~V~~l~ 48 (241)
.++.+++. .-.+++++|+|.||.=+.+-+-+++...+ ..+++.++.
T Consensus 16 ~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg 64 (153)
T cd00741 16 PLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFG 64 (153)
T ss_pred HHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeC
Confidence 34445554 45789999999999555555555655432 233444443
No 8
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=75.73 E-value=1.5 Score=43.91 Aligned_cols=27 Identities=19% Similarity=0.311 Sum_probs=22.0
Q ss_pred hhhhhhhhhhhcccChhhHHHHHhHHH
Q 026241 7 KGMRHAHQALLSGCSAGGLASILHCDE 33 (241)
Q Consensus 7 ~Gl~~A~~viLsG~SAGGl~~~l~~D~ 33 (241)
.|+...+++-++|.|.||..|+.=+-.
T Consensus 467 ~~~~d~~ri~i~G~SyGGymtl~~~~~ 493 (620)
T COG1506 467 LPLVDPERIGITGGSYGGYMTLLAATK 493 (620)
T ss_pred CCCcChHHeEEeccChHHHHHHHHHhc
Confidence 477788899999999999988765443
No 9
>PLN02408 phospholipase A1
Probab=73.80 E-value=4.4 Score=38.41 Aligned_cols=52 Identities=19% Similarity=0.260 Sum_probs=37.6
Q ss_pred hhhhcccChhhHHHHHhHHHHhhhCCCcceEEEeccccccccCCCCCchhhHHhhhhc
Q 026241 14 QALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGLFLDAVDVSGGHTLRNLYSG 71 (241)
Q Consensus 14 ~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (241)
.|+++|+|-||.=+.|.+-+++..++....|.+++-+ .+--|+..+.++++.
T Consensus 201 sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFG------sPRVGN~~Fa~~~~~ 252 (365)
T PLN02408 201 SLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFG------GPRVGNRSFRRQLEK 252 (365)
T ss_pred eEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcC------CCCcccHHHHHHHHh
Confidence 5899999999998999999998877643235554433 355577777776654
No 10
>PLN02802 triacylglycerol lipase
Probab=73.27 E-value=4.5 Score=39.91 Aligned_cols=51 Identities=20% Similarity=0.272 Sum_probs=37.8
Q ss_pred hhhhcccChhhHHHHHhHHHHhhhCCCcceEEEeccccccccCCCCCchhhHHhhhh
Q 026241 14 QALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGLFLDAVDVSGGHTLRNLYS 70 (241)
Q Consensus 14 ~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~ 70 (241)
.|+++|+|-||-=+.|.+.+++...+....|.+++-+ .+--|+..+.++++
T Consensus 331 sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFG------sPRVGN~aFA~~~~ 381 (509)
T PLN02802 331 SITVTGHSLGAALALLVADELATCVPAAPPVAVFSFG------GPRVGNRAFADRLN 381 (509)
T ss_pred eEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcC------CCCcccHHHHHHHH
Confidence 6899999999999999999999887754345554433 35557777777664
No 11
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=70.86 E-value=3.2 Score=39.40 Aligned_cols=25 Identities=24% Similarity=0.351 Sum_probs=22.0
Q ss_pred hhhhhhcccChhhHHHHHhHHHHhh
Q 026241 12 AHQALLSGCSAGGLASILHCDEFRD 36 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~~~ 36 (241)
.+.|+|.|.||||.-++--..|++.
T Consensus 194 ~~nI~LmGDSAGGnL~Ls~LqyL~~ 218 (374)
T PF10340_consen 194 NKNIILMGDSAGGNLALSFLQYLKK 218 (374)
T ss_pred CCeEEEEecCccHHHHHHHHHHHhh
Confidence 5789999999999888888888876
No 12
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=67.37 E-value=2 Score=43.48 Aligned_cols=29 Identities=24% Similarity=0.496 Sum_probs=24.0
Q ss_pred hhHHHhhhhhhhhhhhcccChhhH--HHHHh
Q 026241 2 DDLMSKGMRHAHQALLSGCSAGGL--ASILH 30 (241)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGl--~~~l~ 30 (241)
+.|+..|..+.+.++..|+||||+ |++++
T Consensus 516 ~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N 546 (682)
T COG1770 516 RHLVKEGYTSPDRIVAIGGSAGGMLMGAVAN 546 (682)
T ss_pred HHHHHcCcCCccceEEeccCchhHHHHHHHh
Confidence 468888999999999999999996 44443
No 13
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=66.06 E-value=2 Score=40.92 Aligned_cols=23 Identities=26% Similarity=0.170 Sum_probs=20.2
Q ss_pred hhhhhhhcccChhhHHHHHhHHH
Q 026241 11 HAHQALLSGCSAGGLASILHCDE 33 (241)
Q Consensus 11 ~A~~viLsG~SAGGl~~~l~~D~ 33 (241)
+.++|.|.|.||||..|.+|.=.
T Consensus 206 Dp~~VTl~G~SAGa~sv~~~l~s 228 (535)
T PF00135_consen 206 DPDNVTLFGQSAGAASVSLLLLS 228 (535)
T ss_dssp EEEEEEEEEETHHHHHHHHHHHG
T ss_pred CCcceeeeeecccccccceeeec
Confidence 56889999999999999988765
No 14
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=65.64 E-value=2.5 Score=37.47 Aligned_cols=25 Identities=20% Similarity=0.303 Sum_probs=20.0
Q ss_pred hhhhhhcccChhhHHHHHhHHHHhh
Q 026241 12 AHQALLSGCSAGGLASILHCDEFRD 36 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~~~ 36 (241)
.+++.|.|+|+||..++..+-.-.+
T Consensus 137 ~~~~~~~G~S~GG~~a~~~a~~~p~ 161 (275)
T TIGR02821 137 GERQGITGHSMGGHGALVIALKNPD 161 (275)
T ss_pred CCceEEEEEChhHHHHHHHHHhCcc
Confidence 3679999999999999887755433
No 15
>PLN02454 triacylglycerol lipase
Probab=65.02 E-value=8.1 Score=37.24 Aligned_cols=52 Identities=13% Similarity=0.134 Sum_probs=35.7
Q ss_pred hhhhcccChhhHHHHHhHHHHhhhCC--CcceEEEeccccccccCCCCCchhhHHhhhhc
Q 026241 14 QALLSGCSAGGLASILHCDEFRDFFP--RTTRVKCLSDAGLFLDAVDVSGGHTLRNLYSG 71 (241)
Q Consensus 14 ~viLsG~SAGGl~~~l~~D~~~~~Lp--~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (241)
.|+++|+|-||.=+.|.+-+++.... ....|.++.-+ .+--|+..+..++..
T Consensus 229 sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFG------sPRVGN~~Fa~~~~~ 282 (414)
T PLN02454 229 SIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFG------SPQVGNKEFNDRFKE 282 (414)
T ss_pred eEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeC------CCcccCHHHHHHHHh
Confidence 49999999999999999888876532 23345555422 355577777776654
No 16
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=65.00 E-value=3.1 Score=35.20 Aligned_cols=20 Identities=25% Similarity=0.381 Sum_probs=16.5
Q ss_pred hhhhhhcccChhhHHHHHhH
Q 026241 12 AHQALLSGCSAGGLASILHC 31 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~ 31 (241)
.+++.|.|.|+||..++.-+
T Consensus 94 ~~~i~l~G~S~Gg~~a~~~a 113 (212)
T TIGR01840 94 PNRVYVTGLSAGGGMTAVLG 113 (212)
T ss_pred hhheEEEEECHHHHHHHHHH
Confidence 46899999999998876654
No 17
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=63.63 E-value=6.5 Score=33.66 Aligned_cols=35 Identities=23% Similarity=0.281 Sum_probs=24.7
Q ss_pred hhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEec
Q 026241 13 HQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLS 48 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~ 48 (241)
.+++++|+|-||.=+.+-+-+++...+ ..+++++.
T Consensus 128 ~~i~vtGHSLGGaiA~l~a~~l~~~~~-~~~i~~~t 162 (229)
T cd00519 128 YKIIVTGHSLGGALASLLALDLRLRGP-GSDVTVYT 162 (229)
T ss_pred ceEEEEccCHHHHHHHHHHHHHHhhCC-CCceEEEE
Confidence 578999999999877777777776652 23355554
No 18
>PLN03037 lipase class 3 family protein; Provisional
Probab=63.55 E-value=8.7 Score=38.07 Aligned_cols=54 Identities=17% Similarity=0.242 Sum_probs=38.3
Q ss_pred hhhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEeccccccccCCCCCchhhHHhhhhc
Q 026241 12 AHQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGLFLDAVDVSGGHTLRNLYSG 71 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (241)
...+.++|+|-||-=+.|++-+++..+|....|.+++- ..+--|+..+...++.
T Consensus 317 ~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTF------GsPRVGN~aFA~~~~~ 370 (525)
T PLN03037 317 EVSLTITGHSLGGALALLNAYEAARSVPALSNISVISF------GAPRVGNLAFKEKLNE 370 (525)
T ss_pred cceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEe------cCCCccCHHHHHHHHh
Confidence 34689999999999999999889888775323444442 2355577777766654
No 19
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=63.04 E-value=2 Score=38.36 Aligned_cols=62 Identities=26% Similarity=0.342 Sum_probs=38.2
Q ss_pred hhhhhhhhhcccChhhHHHHHhHHHHhhhCCCcceEEE----------ec-cccccccCCCCCchhhHHhhhhchhh
Q 026241 9 MRHAHQALLSGCSAGGLASILHCDEFRDFFPRTTRVKC----------LS-DAGLFLDAVDVSGGHTLRNLYSGVVG 74 (241)
Q Consensus 9 l~~A~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~----------l~-DSGfFld~~~~~g~~~~~~~~~~~v~ 74 (241)
++..+.|+++|||-||+|--+--.--+. .-.|.+ |. |+|.|.---|++-.+.++.+-..+..
T Consensus 4 ~~~~k~VlItgcs~GGIG~ala~ef~~~----G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~ 76 (289)
T KOG1209|consen 4 QSQPKKVLITGCSSGGIGYALAKEFARN----GYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRA 76 (289)
T ss_pred ccCCCeEEEeecCCcchhHHHHHHHHhC----CeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhh
Confidence 4566789999999999997665443332 222322 33 88988655566655666555444433
No 20
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=62.86 E-value=3.5 Score=34.00 Aligned_cols=29 Identities=24% Similarity=0.406 Sum_probs=21.7
Q ss_pred hhHHHhhhhhhhhhhhcccChhhHHHHHhHHH
Q 026241 2 DDLMSKGMRHAHQALLSGCSAGGLASILHCDE 33 (241)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGl~~~l~~D~ 33 (241)
+-|+.+|+. --+++|+|||++-+.+++-.
T Consensus 18 ~aL~e~gi~---~d~v~GtSaGAi~aa~~a~g 46 (172)
T cd07198 18 KALRERGPL---IDIIAGTSAGAIVAALLASG 46 (172)
T ss_pred HHHHHcCCC---CCEEEEECHHHHHHHHHHcC
Confidence 345666776 67899999999988776653
No 21
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=62.43 E-value=4.9 Score=33.34 Aligned_cols=26 Identities=31% Similarity=0.312 Sum_probs=21.9
Q ss_pred hhhhhhcccChhhHHHHHhHHHHhhh
Q 026241 12 AHQALLSGCSAGGLASILHCDEFRDF 37 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~~~~ 37 (241)
.++|+|+|.||||.=++.-+-+.++.
T Consensus 70 ~~~i~l~G~SAGg~la~~~~~~~~~~ 95 (211)
T PF07859_consen 70 PERIVLIGDSAGGHLALSLALRARDR 95 (211)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHT
T ss_pred ccceEEeecccccchhhhhhhhhhhh
Confidence 78999999999998777777777665
No 22
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=61.95 E-value=7.3 Score=36.44 Aligned_cols=32 Identities=25% Similarity=0.343 Sum_probs=24.5
Q ss_pred HHHhhhhhhhhhhhcccChhhHHHHHhHHHHhh
Q 026241 4 LMSKGMRHAHQALLSGCSAGGLASILHCDEFRD 36 (241)
Q Consensus 4 Ll~~Gl~~A~~viLsG~SAGGl~~~l~~D~~~~ 36 (241)
++.+|.+- ++|.|+|.||||--|..=+.++++
T Consensus 158 ~~~~~~D~-~rv~l~GDSaGGNia~~va~r~~~ 189 (336)
T KOG1515|consen 158 WLKLGADP-SRVFLAGDSAGGNIAHVVAQRAAD 189 (336)
T ss_pred HHHhCCCc-ccEEEEccCccHHHHHHHHHHHhh
Confidence 44454443 459999999999988888888876
No 23
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=60.80 E-value=4 Score=31.26 Aligned_cols=23 Identities=22% Similarity=0.284 Sum_probs=19.2
Q ss_pred hhhhhhhhcccChhhHHHHHhHH
Q 026241 10 RHAHQALLSGCSAGGLASILHCD 32 (241)
Q Consensus 10 ~~A~~viLsG~SAGGl~~~l~~D 32 (241)
.+.++++|.|.|+||..++.-+-
T Consensus 58 ~~~~~i~l~G~S~Gg~~a~~~~~ 80 (145)
T PF12695_consen 58 PDPDRIILIGHSMGGAIAANLAA 80 (145)
T ss_dssp CTCCEEEEEEETHHHHHHHHHHH
T ss_pred CCCCcEEEEEEccCcHHHHHHhh
Confidence 47889999999999987776554
No 24
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=59.63 E-value=4.1 Score=38.52 Aligned_cols=17 Identities=29% Similarity=0.427 Sum_probs=14.3
Q ss_pred hhhhhhcccChhhHHHH
Q 026241 12 AHQALLSGCSAGGLASI 28 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~ 28 (241)
-++|.++|+|-||.+++
T Consensus 227 ~~~i~~~GHSFGGATa~ 243 (379)
T PF03403_consen 227 LSRIGLAGHSFGGATAL 243 (379)
T ss_dssp EEEEEEEEETHHHHHHH
T ss_pred hhheeeeecCchHHHHH
Confidence 35689999999998888
No 25
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=58.65 E-value=8.3 Score=34.56 Aligned_cols=26 Identities=27% Similarity=0.281 Sum_probs=23.4
Q ss_pred hhhhhhcccChhhHHHHHhHHHHhhh
Q 026241 12 AHQALLSGCSAGGLASILHCDEFRDF 37 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~~~~ 37 (241)
.++|.++|+||||.=+..-+-..++.
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~ 176 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDR 176 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhc
Confidence 57899999999999999988888886
No 26
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=57.64 E-value=8.3 Score=36.26 Aligned_cols=33 Identities=27% Similarity=0.397 Sum_probs=24.5
Q ss_pred ccccCCCCCCCchhhhhhccCCCeeeehhhhhHHH
Q 026241 86 CTNHLDPTSCFFPQNIIRQVRTPLFILNAAYDSWQ 120 (241)
Q Consensus 86 C~~~~~~~~Cffpq~~~~~I~tP~Fi~ns~YD~wQ 120 (241)
|.=.+|.|.=-..|..++.++.|+|++|. |-||
T Consensus 267 caI~lD~WM~Pl~~~~~~~arqP~~finv--~~fQ 299 (399)
T KOG3847|consen 267 CAIALDAWMFPLDQLQYSQARQPTLFINV--EDFQ 299 (399)
T ss_pred eeeeeeeeecccchhhhhhccCCeEEEEc--cccc
Confidence 43345778766778899999999999993 4444
No 27
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=56.46 E-value=4.5 Score=38.67 Aligned_cols=24 Identities=25% Similarity=0.202 Sum_probs=20.1
Q ss_pred hhhhhhhhcccChhhHHHHHhHHH
Q 026241 10 RHAHQALLSGCSAGGLASILHCDE 33 (241)
Q Consensus 10 ~~A~~viLsG~SAGGl~~~l~~D~ 33 (241)
.+.++|.|.|.||||..+.++.=.
T Consensus 173 gd~~~v~~~G~SaG~~~~~~~~~~ 196 (493)
T cd00312 173 GDPDSVTIFGESAGGASVSLLLLS 196 (493)
T ss_pred CCcceEEEEeecHHHHHhhhHhhC
Confidence 467899999999999988887643
No 28
>PLN02442 S-formylglutathione hydrolase
Probab=54.45 E-value=5.3 Score=35.73 Aligned_cols=23 Identities=22% Similarity=0.267 Sum_probs=18.9
Q ss_pred hhhhhhhcccChhhHHHHHhHHH
Q 026241 11 HAHQALLSGCSAGGLASILHCDE 33 (241)
Q Consensus 11 ~A~~viLsG~SAGGl~~~l~~D~ 33 (241)
+.+++.|.|.|+||.+++..+-+
T Consensus 141 ~~~~~~i~G~S~GG~~a~~~a~~ 163 (283)
T PLN02442 141 DTSRASIFGHSMGGHGALTIYLK 163 (283)
T ss_pred CCCceEEEEEChhHHHHHHHHHh
Confidence 45778999999999999876654
No 29
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=54.15 E-value=4.3 Score=35.41 Aligned_cols=24 Identities=25% Similarity=0.308 Sum_probs=18.7
Q ss_pred hhhhhhhhhhcccChhhHHHHHhH
Q 026241 8 GMRHAHQALLSGCSAGGLASILHC 31 (241)
Q Consensus 8 Gl~~A~~viLsG~SAGGl~~~l~~ 31 (241)
.....+.|+|-|+|.||+-+-.-+
T Consensus 80 ~~~~~~~vilVgHSmGGlvar~~l 103 (225)
T PF07819_consen 80 NRPPPRSVILVGHSMGGLVARSAL 103 (225)
T ss_pred ccCCCCceEEEEEchhhHHHHHHH
Confidence 356789999999999998654433
No 30
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=53.96 E-value=17 Score=33.82 Aligned_cols=54 Identities=15% Similarity=0.142 Sum_probs=33.7
Q ss_pred hhhhhhcccChhhHHHHHhHHHHhhh-CCCcceEEEeccccccccCCCCCchhhHHhhhhc
Q 026241 12 AHQALLSGCSAGGLASILHCDEFRDF-FPRTTRVKCLSDAGLFLDAVDVSGGHTLRNLYSG 71 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~~~~-Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (241)
--.|.++|+|.||.=+.+-+.++... +.....|+.+.=+ .+-.|+..+.+.++.
T Consensus 170 ~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG------~PRvGn~~fa~~~d~ 224 (336)
T KOG4569|consen 170 NYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFG------QPRVGNLAFAEWHDE 224 (336)
T ss_pred CcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEec------CCCcccHHHHHHHHh
Confidence 45789999999996666666555554 4333445555433 366677776665554
No 31
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=53.12 E-value=6.1 Score=34.60 Aligned_cols=30 Identities=30% Similarity=0.412 Sum_probs=20.4
Q ss_pred hHHHhhhhhhhhhhhcccChhhHHHHHhHHH
Q 026241 3 DLMSKGMRHAHQALLSGCSAGGLASILHCDE 33 (241)
Q Consensus 3 dLl~~Gl~~A~~viLsG~SAGGl~~~l~~D~ 33 (241)
-|+.+|+.. +...++|.|||++.+.+++-.
T Consensus 20 ~L~e~gi~~-~~~~i~G~SAGAl~aa~~asg 49 (233)
T cd07224 20 LLIEAGVIN-ETTPLAGASAGSLAAACSASG 49 (233)
T ss_pred HHHHcCCCC-CCCEEEEEcHHHHHHHHHHcC
Confidence 355556542 234689999999988877653
No 32
>PRK10162 acetyl esterase; Provisional
Probab=51.99 E-value=8.6 Score=34.95 Aligned_cols=27 Identities=22% Similarity=0.239 Sum_probs=22.1
Q ss_pred hhhhhhhcccChhhHHHHHhHHHHhhh
Q 026241 11 HAHQALLSGCSAGGLASILHCDEFRDF 37 (241)
Q Consensus 11 ~A~~viLsG~SAGGl~~~l~~D~~~~~ 37 (241)
+.++++|.|.||||.-++.-+-.+++.
T Consensus 152 d~~~i~l~G~SaGG~la~~~a~~~~~~ 178 (318)
T PRK10162 152 NMSRIGFAGDSAGAMLALASALWLRDK 178 (318)
T ss_pred ChhHEEEEEECHHHHHHHHHHHHHHhc
Confidence 457899999999999888777766654
No 33
>TIGR02747 TraV type IV conjugative transfer system lipoprotein TraV. The TraV protein is a component of conjugative type IV secretion systems. TraV is an outer membrane lipoprotein and is believed to interact with the secretin TraK. The alignment contains three conserved cysteines in the N-terminal half.
Probab=50.61 E-value=5.9 Score=32.75 Aligned_cols=9 Identities=78% Similarity=1.449 Sum_probs=7.4
Q ss_pred hhhcccChh
Q 026241 15 ALLSGCSAG 23 (241)
Q Consensus 15 viLsG~SAG 23 (241)
++|+|||||
T Consensus 13 alLtGCsag 21 (144)
T TIGR02747 13 AFLTGCSAG 21 (144)
T ss_pred HHhhcccCC
Confidence 449999996
No 34
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=50.49 E-value=6.3 Score=37.65 Aligned_cols=22 Identities=32% Similarity=0.524 Sum_probs=18.3
Q ss_pred hhhhhhhhcccChhhHHHHHhH
Q 026241 10 RHAHQALLSGCSAGGLASILHC 31 (241)
Q Consensus 10 ~~A~~viLsG~SAGGl~~~l~~ 31 (241)
.+++..+|+|.|.||++++.-+
T Consensus 285 ~d~~~~~IaG~S~GGl~AL~~a 306 (411)
T PRK10439 285 DDADRTVVAGQSFGGLAALYAG 306 (411)
T ss_pred CCccceEEEEEChHHHHHHHHH
Confidence 4567889999999999998654
No 35
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=50.42 E-value=7.9 Score=30.68 Aligned_cols=17 Identities=41% Similarity=0.606 Sum_probs=13.6
Q ss_pred hhhcccChhhHHHHHhH
Q 026241 15 ALLSGCSAGGLASILHC 31 (241)
Q Consensus 15 viLsG~SAGGl~~~l~~ 31 (241)
-+++|.||||+.+.+.+
T Consensus 29 d~i~GtS~Gal~a~~~~ 45 (204)
T PF01734_consen 29 DVISGTSAGALNAALLA 45 (204)
T ss_dssp SEEEEECCHHHHHHHHH
T ss_pred cEEEEcChhhhhHHHHH
Confidence 47899999999885544
No 36
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=50.31 E-value=7.3 Score=34.38 Aligned_cols=29 Identities=21% Similarity=0.298 Sum_probs=19.3
Q ss_pred hHHHhhhhhhhh-hhhcccChhhHHHHHhH
Q 026241 3 DLMSKGMRHAHQ-ALLSGCSAGGLASILHC 31 (241)
Q Consensus 3 dLl~~Gl~~A~~-viLsG~SAGGl~~~l~~ 31 (241)
-|+.+|..-... -.++|+|||++.+...+
T Consensus 20 ~L~e~g~~l~~~~~~i~GtSAGAl~aa~~a 49 (243)
T cd07204 20 ALREHAPRLLQNARRIAGASAGAIVAAVVL 49 (243)
T ss_pred HHHHcCcccccCCCEEEEEcHHHHHHHHHH
Confidence 355556543222 48999999999887655
No 37
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=49.72 E-value=8.3 Score=30.73 Aligned_cols=37 Identities=19% Similarity=0.316 Sum_probs=24.2
Q ss_pred hhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEecccccc
Q 026241 13 HQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGLF 53 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGfF 53 (241)
+.++|.|+|.||.-++..+.+ .|..++=..+.+++..
T Consensus 66 ~~~~lvG~S~Gg~~a~~~a~~----~p~~v~~~vl~~~~~~ 102 (228)
T PF12697_consen 66 KKVILVGHSMGGMIALRLAAR----YPDRVKGLVLLSPPPP 102 (228)
T ss_dssp SSEEEEEETHHHHHHHHHHHH----SGGGEEEEEEESESSS
T ss_pred ccccccccccccccccccccc----cccccccceeeccccc
Confidence 689999999999888877754 3433332334444443
No 38
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=49.01 E-value=9.4 Score=32.37 Aligned_cols=47 Identities=19% Similarity=0.336 Sum_probs=26.2
Q ss_pred hhHHHhhhhhhhhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEeccccccc
Q 026241 2 DDLMSKGMRHAHQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGLFL 54 (241)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGfFl 54 (241)
++++..| -.+++|+|.|.|-||.-++.-+=.-...+ .-|.++ ||+++
T Consensus 95 ~~~~~~~-i~~~ri~l~GFSQGa~~al~~~l~~p~~~---~gvv~l--sG~~~ 141 (216)
T PF02230_consen 95 DEEVAYG-IDPSRIFLGGFSQGAAMALYLALRYPEPL---AGVVAL--SGYLP 141 (216)
T ss_dssp HHHHHTT---GGGEEEEEETHHHHHHHHHHHCTSSTS---SEEEEE--S---T
T ss_pred HHHHHcC-CChhheehhhhhhHHHHHHHHHHHcCcCc---CEEEEe--ecccc
Confidence 3444456 56688999999999998887653332222 234444 47764
No 39
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=48.86 E-value=8 Score=34.20 Aligned_cols=23 Identities=35% Similarity=0.557 Sum_probs=19.2
Q ss_pred hhhhhhcccChhhHHHHHhHHHH
Q 026241 12 AHQALLSGCSAGGLASILHCDEF 34 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~ 34 (241)
.++++|.|+|.||+-++..+.+.
T Consensus 86 ~~~v~lvGhS~GG~v~~~~a~~~ 108 (273)
T PLN02211 86 NEKVILVGHSAGGLSVTQAIHRF 108 (273)
T ss_pred CCCEEEEEECchHHHHHHHHHhC
Confidence 47899999999999888777543
No 40
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=48.73 E-value=17 Score=32.58 Aligned_cols=39 Identities=21% Similarity=0.228 Sum_probs=27.1
Q ss_pred hhhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEecccccc
Q 026241 12 AHQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGLF 53 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGfF 53 (241)
-+++.|.|+|.||.-+..-+.++..++. ++.+|-=+|-+
T Consensus 111 ~~~i~lIGhSlGa~vAg~~a~~~~~~v~---~iv~LDPa~p~ 149 (275)
T cd00707 111 LENVHLIGHSLGAHVAGFAGKRLNGKLG---RITGLDPAGPL 149 (275)
T ss_pred hHHEEEEEecHHHHHHHHHHHHhcCccc---eeEEecCCccc
Confidence 4689999999999988887776655443 34455435543
No 41
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=48.63 E-value=8.7 Score=32.84 Aligned_cols=19 Identities=21% Similarity=0.378 Sum_probs=15.8
Q ss_pred hhhcccChhhHHHHHhHHH
Q 026241 15 ALLSGCSAGGLASILHCDE 33 (241)
Q Consensus 15 viLsG~SAGGl~~~l~~D~ 33 (241)
..++|.|.||++++.-+=+
T Consensus 117 ~~i~G~S~GG~~Al~~~l~ 135 (251)
T PF00756_consen 117 RAIAGHSMGGYGALYLALR 135 (251)
T ss_dssp EEEEEETHHHHHHHHHHHH
T ss_pred eEEeccCCCcHHHHHHHHh
Confidence 7999999999999875433
No 42
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=48.45 E-value=6.8 Score=33.87 Aligned_cols=22 Identities=36% Similarity=0.706 Sum_probs=15.3
Q ss_pred hhhcccChhhHHHHHhHHHHhhhCCC
Q 026241 15 ALLSGCSAGGLASILHCDEFRDFFPR 40 (241)
Q Consensus 15 viLsG~SAGGl~~~l~~D~~~~~Lp~ 40 (241)
-|.||||.|| +|+-.|-=+.|.
T Consensus 103 ~~~sgcsmGa----yhA~nfvfrhP~ 124 (227)
T COG4947 103 TIVSGCSMGA----YHAANFVFRHPH 124 (227)
T ss_pred ccccccchhh----hhhhhhheeChh
Confidence 4679999999 555555555554
No 43
>PRK13604 luxD acyl transferase; Provisional
Probab=47.22 E-value=16 Score=33.83 Aligned_cols=62 Identities=23% Similarity=0.442 Sum_probs=37.1
Q ss_pred hhhhhhccCCCeeeehhhhhHHH-------HhhccCCCCCCCCCCcccccc----CCCCCCHHHHHHHHHHHHHHHHHHh
Q 026241 98 PQNIIRQVRTPLFILNAAYDSWQ-------IQSSLAPPSADPHGHWHDCRL----NHAKCSASQIRFLQGFRNQVLKAVR 166 (241)
Q Consensus 98 pq~~~~~I~tP~Fi~ns~YD~wQ-------l~~~l~~~~~dp~g~w~~C~~----~~~~C~~~q~~~lq~fr~~~~~~l~ 166 (241)
|...++.++.|+++++.-=|.|- +...+.- . .|+. +....-.+-+-.+++|.+++-++.-
T Consensus 194 ~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s--~-------~kkl~~i~Ga~H~l~~~~~~~~~~~~~~~~~~~ 264 (307)
T PRK13604 194 TINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRS--E-------QCKLYSLIGSSHDLGENLVVLRNFYQSVTKAAI 264 (307)
T ss_pred HHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhcc--C-------CcEEEEeCCCccccCcchHHHHHHHHHHHHHHh
Confidence 34556778999999999888542 2222210 0 1221 1123445567889999888877754
Q ss_pred cc
Q 026241 167 GF 168 (241)
Q Consensus 167 ~~ 168 (241)
.+
T Consensus 265 ~~ 266 (307)
T PRK13604 265 AL 266 (307)
T ss_pred ee
Confidence 43
No 44
>PLN02965 Probable pheophorbidase
Probab=46.58 E-value=15 Score=31.49 Aligned_cols=20 Identities=30% Similarity=0.336 Sum_probs=16.0
Q ss_pred hhhhhcccChhhHHHHHhHH
Q 026241 13 HQALLSGCSAGGLASILHCD 32 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D 32 (241)
+.++|.|+|.||.-++..+.
T Consensus 72 ~~~~lvGhSmGG~ia~~~a~ 91 (255)
T PLN02965 72 HKVILVGHSIGGGSVTEALC 91 (255)
T ss_pred CCEEEEecCcchHHHHHHHH
Confidence 58999999999986665554
No 45
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=46.49 E-value=9.8 Score=33.63 Aligned_cols=28 Identities=25% Similarity=0.437 Sum_probs=18.4
Q ss_pred HHHhhhhhhhhh-hhcccChhhHHHHHhH
Q 026241 4 LMSKGMRHAHQA-LLSGCSAGGLASILHC 31 (241)
Q Consensus 4 Ll~~Gl~~A~~v-iLsG~SAGGl~~~l~~ 31 (241)
|+..|..=-+.+ .++|+|||++.+.+.+
T Consensus 21 L~e~g~~l~~~~~~i~GtSaGAl~aa~~a 49 (246)
T cd07222 21 LLRHGKKLLKRVKRFAGASAGSLVAAVLL 49 (246)
T ss_pred HHHcCchhhccCCEEEEECHHHHHHHHHh
Confidence 444554322223 7899999999887774
No 46
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=45.85 E-value=11 Score=32.10 Aligned_cols=22 Identities=23% Similarity=0.421 Sum_probs=16.1
Q ss_pred hhhhcccChhhHHHHHhHHHHhhhCC
Q 026241 14 QALLSGCSAGGLASILHCDEFRDFFP 39 (241)
Q Consensus 14 ~viLsG~SAGGl~~~l~~D~~~~~Lp 39 (241)
.++|.|+|.||.-+. +++.+++
T Consensus 60 ~~~liGSSlGG~~A~----~La~~~~ 81 (187)
T PF05728_consen 60 NVVLIGSSLGGFYAT----YLAERYG 81 (187)
T ss_pred CeEEEEEChHHHHHH----HHHHHhC
Confidence 489999999995544 5555554
No 47
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=45.77 E-value=10 Score=33.71 Aligned_cols=16 Identities=44% Similarity=0.484 Sum_probs=13.5
Q ss_pred hhcccChhhHHHHHhH
Q 026241 16 LLSGCSAGGLASILHC 31 (241)
Q Consensus 16 iLsG~SAGGl~~~l~~ 31 (241)
.++|+|||++.+...+
T Consensus 33 ~i~GtSAGAl~aa~~a 48 (245)
T cd07218 33 KISGASAGALAACCLL 48 (245)
T ss_pred eEEEEcHHHHHHHHHH
Confidence 3999999999888754
No 48
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=45.77 E-value=13 Score=30.99 Aligned_cols=20 Identities=20% Similarity=0.253 Sum_probs=17.9
Q ss_pred hhhhhcccChhhHHHHHhHH
Q 026241 13 HQALLSGCSAGGLASILHCD 32 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D 32 (241)
+.++|.|+|.|.++++.++.
T Consensus 55 ~~~ilVaHSLGc~~~l~~l~ 74 (171)
T PF06821_consen 55 EPTILVAHSLGCLTALRWLA 74 (171)
T ss_dssp TTEEEEEETHHHHHHHHHHH
T ss_pred CCeEEEEeCHHHHHHHHHHh
Confidence 34899999999999999987
No 49
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=45.51 E-value=18 Score=30.62 Aligned_cols=21 Identities=19% Similarity=0.143 Sum_probs=17.3
Q ss_pred hhhhhcccChhhHHHHHhHHH
Q 026241 13 HQALLSGCSAGGLASILHCDE 33 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~ 33 (241)
+.++|.|.|.||.-++..+..
T Consensus 95 ~~~~lvG~S~Gg~~a~~~a~~ 115 (278)
T TIGR03056 95 SPDGVIGHSAGAAIALRLALD 115 (278)
T ss_pred CCceEEEECccHHHHHHHHHh
Confidence 567999999999988877644
No 50
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=42.20 E-value=23 Score=29.54 Aligned_cols=36 Identities=19% Similarity=0.268 Sum_probs=27.4
Q ss_pred hhhhcccChhhHHHHHhHHHHhhhCCCcceEEEeccc
Q 026241 14 QALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDA 50 (241)
Q Consensus 14 ~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DS 50 (241)
..+|.|.|.||+=++-=+-++.+. ...+....+.|+
T Consensus 67 p~~L~G~S~Gg~lA~E~A~~Le~~-G~~v~~l~liD~ 102 (229)
T PF00975_consen 67 PYVLAGWSFGGILAFEMARQLEEA-GEEVSRLILIDS 102 (229)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHT-T-SESEEEEESC
T ss_pred CeeehccCccHHHHHHHHHHHHHh-hhccCceEEecC
Confidence 689999999999999888888887 334555556663
No 51
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=41.29 E-value=13 Score=30.33 Aligned_cols=24 Identities=21% Similarity=0.354 Sum_probs=19.5
Q ss_pred hhhcccChhhHHHHHhHHHHhhhC
Q 026241 15 ALLSGCSAGGLASILHCDEFRDFF 38 (241)
Q Consensus 15 viLsG~SAGGl~~~l~~D~~~~~L 38 (241)
+.+.|.|.||.=++..+-..-+++
T Consensus 46 ~~~vG~S~Gg~~~~~~a~~~p~~v 69 (230)
T PF00561_consen 46 INLVGHSMGGMLALEYAAQYPERV 69 (230)
T ss_dssp EEEEEETHHHHHHHHHHHHSGGGE
T ss_pred eEEEEECCChHHHHHHHHHCchhh
Confidence 999999999998888886655533
No 52
>PF12070 DUF3550: Protein of unknown function (DUF3550/UPF0682); InterPro: IPR022709 This family of proteins is functionally uncharacterised. This protein is found in eukaryotes. Proteins in this family are typically between 249 to 606 amino acids in length.
Probab=41.17 E-value=40 Score=33.42 Aligned_cols=23 Identities=26% Similarity=0.742 Sum_probs=20.2
Q ss_pred CCCCCchhhhhhccCCCeeeehh
Q 026241 92 PTSCFFPQNIIRQVRTPLFILNA 114 (241)
Q Consensus 92 ~~~Cffpq~~~~~I~tP~Fi~ns 114 (241)
...|.+|..++|+.+.|+|||--
T Consensus 365 ~~~~LyP~DL~PFTRkPLFlIVD 387 (513)
T PF12070_consen 365 EMHCLYPGDLYPFTRKPLFLIVD 387 (513)
T ss_pred CCcccchhhccccccCCeEEEEe
Confidence 34899999999999999999853
No 53
>PLN02310 triacylglycerol lipase
Probab=40.24 E-value=35 Score=32.87 Aligned_cols=52 Identities=19% Similarity=0.227 Sum_probs=35.0
Q ss_pred hhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEeccccccccCCCCCchhhHHhhhhc
Q 026241 13 HQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGLFLDAVDVSGGHTLRNLYSG 71 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (241)
..|+++|+|-||-=+.|.+.+++..++. ..|..++- ..+--|+..+.+.++.
T Consensus 209 ~sI~vTGHSLGGALAtLaA~dl~~~~~~-~~v~vyTF------GsPRVGN~~Fa~~~~~ 260 (405)
T PLN02310 209 VSLTVTGHSLGGALALLNAYEAATTIPD-LFVSVISF------GAPRVGNIAFKEKLNE 260 (405)
T ss_pred ceEEEEcccHHHHHHHHHHHHHHHhCcC-cceeEEEe------cCCCcccHHHHHHHHh
Confidence 4689999999998888888888876653 23333332 2355567766665553
No 54
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=39.05 E-value=32 Score=32.74 Aligned_cols=20 Identities=10% Similarity=0.057 Sum_probs=16.2
Q ss_pred hhhhhhhcccChhhHHHHHh
Q 026241 11 HAHQALLSGCSAGGLASILH 30 (241)
Q Consensus 11 ~A~~viLsG~SAGGl~~~l~ 30 (241)
+.+++.+.|.|.||.-++.-
T Consensus 263 d~~ri~l~G~S~GG~~Al~~ 282 (414)
T PRK05077 263 DHTRVAAFGFRFGANVAVRL 282 (414)
T ss_pred CcccEEEEEEChHHHHHHHH
Confidence 55789999999999877643
No 55
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=38.57 E-value=15 Score=30.42 Aligned_cols=26 Identities=27% Similarity=0.441 Sum_probs=17.5
Q ss_pred hHHHhhhhhhhhhhhcccChhhHHHHHhH
Q 026241 3 DLMSKGMRHAHQALLSGCSAGGLASILHC 31 (241)
Q Consensus 3 dLl~~Gl~~A~~viLsG~SAGGl~~~l~~ 31 (241)
.|..+|+. -=+++|.|||++-+.+.+
T Consensus 20 ~L~e~~~~---~d~i~GtSaGai~aa~~a 45 (194)
T cd07207 20 ALEEAGIL---KKRVAGTSAGAITAALLA 45 (194)
T ss_pred HHHHcCCC---cceEEEECHHHHHHHHHH
Confidence 34444543 268899999998665555
No 56
>PLN02571 triacylglycerol lipase
Probab=38.27 E-value=46 Score=32.13 Aligned_cols=53 Identities=23% Similarity=0.344 Sum_probs=33.9
Q ss_pred hhhhcccChhhHHHHHhHHHHhhh-CCC-------cceEEEeccccccccCCCCCchhhHHhhhhch
Q 026241 14 QALLSGCSAGGLASILHCDEFRDF-FPR-------TTRVKCLSDAGLFLDAVDVSGGHTLRNLYSGV 72 (241)
Q Consensus 14 ~viLsG~SAGGl~~~l~~D~~~~~-Lp~-------~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~~ 72 (241)
.|+++|+|-||.=+.|.+-+++.. +.+ .+.|.+++- ..+--|+..+.+.+...
T Consensus 227 sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TF------GsPRVGN~~Fa~~~~~~ 287 (413)
T PLN02571 227 SITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVF------ASPRVGDSDFKKLFSGL 287 (413)
T ss_pred cEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEe------CCCCccCHHHHHHHhcc
Confidence 589999999998777877777653 321 223444442 23555777777766543
No 57
>PLN02324 triacylglycerol lipase
Probab=37.95 E-value=44 Score=32.32 Aligned_cols=52 Identities=17% Similarity=0.260 Sum_probs=32.1
Q ss_pred hhhhcccChhhHHHHHhHHHHhhhC---------CCcceEEEeccccccccCCCCCchhhHHhhhhc
Q 026241 14 QALLSGCSAGGLASILHCDEFRDFF---------PRTTRVKCLSDAGLFLDAVDVSGGHTLRNLYSG 71 (241)
Q Consensus 14 ~viLsG~SAGGl~~~l~~D~~~~~L---------p~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (241)
.|+++|+|-||-=+.|.+-++.... +....|..++- ..+--|+..+..++..
T Consensus 216 sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TF------GsPRVGN~~Fa~~~~~ 276 (415)
T PLN02324 216 SITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAF------GSPRIGDHNFKNLVDS 276 (415)
T ss_pred eEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEe------cCCCcCCHHHHHHHHh
Confidence 5899999999988888876665431 11223333331 2355577777766654
No 58
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=37.38 E-value=16 Score=32.67 Aligned_cols=17 Identities=29% Similarity=0.374 Sum_probs=13.5
Q ss_pred hhhcccChhhHHHHHhH
Q 026241 15 ALLSGCSAGGLASILHC 31 (241)
Q Consensus 15 viLsG~SAGGl~~~l~~ 31 (241)
-.++|+|||++.+...+
T Consensus 38 ~~i~G~SAGAl~aa~~a 54 (249)
T cd07220 38 RKIYGASAGALTATALV 54 (249)
T ss_pred CeEEEEcHHHHHHHHHH
Confidence 45789999999888643
No 59
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=35.19 E-value=19 Score=29.75 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=17.5
Q ss_pred hhhhhhcccChhhHHHHHhHHH
Q 026241 12 AHQALLSGCSAGGLASILHCDE 33 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~ 33 (241)
.++++|.|.|.||.-++..+-.
T Consensus 79 ~~~~~l~G~S~Gg~~a~~~a~~ 100 (257)
T TIGR03611 79 IERFHFVGHALGGLIGLQLALR 100 (257)
T ss_pred CCcEEEEEechhHHHHHHHHHH
Confidence 3578999999999888776544
No 60
>PF07829 Toxin_14: Alpha-A conotoxin PIVA-like protein; InterPro: IPR012498 Alpha-A conotoxin PIVA (P55963 from SWISSPROT) is the major paralytic toxin found in the venom produced by the piscivorous snail Conus purpurascens. This peptide acts by blocking the acetylcholine-binding site of the nicotinic acetylcholine receptor at the neuromuscular junction []. The overall shape of the peptide is described as an "iron" with a highly charged hydrophilic loop of 15S-19R forming the "handle" domain that is exposed to the exterior of the protein. The stability of the conotoxin is primarily governed by three disulphide bonds. A triangular structural motif formed by residues 19R, 12H and 6Y is thought to constitute a "binding core" that is important in binding to the acetylcholine receptor []. ; GO: 0030550 acetylcholine receptor inhibitor activity, 0009405 pathogenesis, 0005576 extracellular region; PDB: 1PQR_A 1P1P_A.
Probab=34.34 E-value=20 Score=20.68 Aligned_cols=9 Identities=56% Similarity=1.553 Sum_probs=5.5
Q ss_pred CCCCCCCCCC
Q 026241 226 PYPCDKTCHN 235 (241)
Q Consensus 226 ~yPcNptC~~ 235 (241)
||| |-.|+.
T Consensus 5 ~yp-naachp 13 (26)
T PF07829_consen 5 PYP-NAACHP 13 (26)
T ss_dssp TSS-SSS--T
T ss_pred CCC-Cccccc
Confidence 899 777764
No 61
>PRK00870 haloalkane dehalogenase; Provisional
Probab=34.28 E-value=30 Score=30.46 Aligned_cols=36 Identities=22% Similarity=0.285 Sum_probs=22.2
Q ss_pred hhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEeccccc
Q 026241 13 HQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGL 52 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGf 52 (241)
+.++|.|+|.||.-++.-+-. -|..++=..+.+++.
T Consensus 115 ~~v~lvGhS~Gg~ia~~~a~~----~p~~v~~lvl~~~~~ 150 (302)
T PRK00870 115 TDVTLVCQDWGGLIGLRLAAE----HPDRFARLVVANTGL 150 (302)
T ss_pred CCEEEEEEChHHHHHHHHHHh----ChhheeEEEEeCCCC
Confidence 468999999999766654433 343333334445553
No 62
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=33.59 E-value=24 Score=27.99 Aligned_cols=24 Identities=25% Similarity=0.308 Sum_probs=18.9
Q ss_pred hhhcccChhhHHHHHhHHHHhhhC
Q 026241 15 ALLSGCSAGGLASILHCDEFRDFF 38 (241)
Q Consensus 15 viLsG~SAGGl~~~l~~D~~~~~L 38 (241)
++|.|.|.||.-++..+....+.+
T Consensus 90 ~~l~G~S~Gg~~~~~~~~~~p~~~ 113 (282)
T COG0596 90 VVLVGHSMGGAVALALALRHPDRV 113 (282)
T ss_pred eEEEEecccHHHHHHHHHhcchhh
Confidence 999999999988877776655533
No 63
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=33.42 E-value=26 Score=32.45 Aligned_cols=27 Identities=30% Similarity=0.311 Sum_probs=21.1
Q ss_pred hhhhhhhhhcccChhhHHHHHhHHHHhhhCC
Q 026241 9 MRHAHQALLSGCSAGGLASILHCDEFRDFFP 39 (241)
Q Consensus 9 l~~A~~viLsG~SAGGl~~~l~~D~~~~~Lp 39 (241)
...|+.+.|.|+|+||+-+. |+...++
T Consensus 123 ~~ga~~v~LigHS~GG~~~r----y~~~~~~ 149 (336)
T COG1075 123 KTGAKKVNLIGHSMGGLDSR----YYLGVLG 149 (336)
T ss_pred hcCCCceEEEeecccchhhH----HHHhhcC
Confidence 35669999999999999888 5555555
No 64
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=33.02 E-value=20 Score=29.31 Aligned_cols=27 Identities=30% Similarity=0.463 Sum_probs=19.1
Q ss_pred hhHHHhhhhhhhhhhhcccChhhHHHHHhH
Q 026241 2 DDLMSKGMRHAHQALLSGCSAGGLASILHC 31 (241)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGl~~~l~~ 31 (241)
+.|..+|+. --+++|.|||++-+.+.+
T Consensus 20 ~~L~~~~~~---~d~i~GtSaGal~a~~~a 46 (175)
T cd07205 20 KALEEAGIP---IDIVSGTSAGAIVGALYA 46 (175)
T ss_pred HHHHHcCCC---eeEEEEECHHHHHHHHHH
Confidence 345555652 347899999999886665
No 65
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=32.77 E-value=20 Score=29.50 Aligned_cols=25 Identities=28% Similarity=0.505 Sum_probs=16.3
Q ss_pred hHHHhhhhhhhhhhhcccChhhHHHHHh
Q 026241 3 DLMSKGMRHAHQALLSGCSAGGLASILH 30 (241)
Q Consensus 3 dLl~~Gl~~A~~viLsG~SAGGl~~~l~ 30 (241)
.|...|+ .-=+++|.|||++-+.+.
T Consensus 21 ~L~e~g~---~~d~i~GtSaGAi~aa~~ 45 (175)
T cd07228 21 ALEEEGI---EIDIIAGSSIGALVGALY 45 (175)
T ss_pred HHHHCCC---CeeEEEEeCHHHHHHHHH
Confidence 3444554 245889999999955443
No 66
>PRK10349 carboxylesterase BioH; Provisional
Probab=32.62 E-value=21 Score=30.40 Aligned_cols=26 Identities=23% Similarity=0.241 Sum_probs=19.1
Q ss_pred hhhhhcccChhhHHHHHhHHHHhhhC
Q 026241 13 HQALLSGCSAGGLASILHCDEFRDFF 38 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~~~~~L 38 (241)
+.+.|.|.|.||.-++..+-+..+++
T Consensus 74 ~~~~lvGhS~Gg~ia~~~a~~~p~~v 99 (256)
T PRK10349 74 DKAIWLGWSLGGLVASQIALTHPERV 99 (256)
T ss_pred CCeEEEEECHHHHHHHHHHHhChHhh
Confidence 57889999999998886655443333
No 67
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=32.47 E-value=20 Score=32.76 Aligned_cols=28 Identities=25% Similarity=0.281 Sum_probs=20.5
Q ss_pred hhhhhcccChhhHHHHHhHHHHhhh--CCC
Q 026241 13 HQALLSGCSAGGLASILHCDEFRDF--FPR 40 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~~~~~--Lp~ 40 (241)
+.+=+.|+|+||+|...+.-....- ||+
T Consensus 136 ~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~ 165 (288)
T COG4814 136 PKFNAVGHSMGGLGLTYYMIDYGDDKSLPP 165 (288)
T ss_pred ceeeeeeeccccHHHHHHHHHhcCCCCCcc
Confidence 4455789999999998877665432 665
No 68
>PRK04940 hypothetical protein; Provisional
Probab=32.34 E-value=25 Score=30.07 Aligned_cols=23 Identities=17% Similarity=0.378 Sum_probs=19.7
Q ss_pred hhhhhcccChhhHHHHHhHHHHhhhCC
Q 026241 13 HQALLSGCSAGGLASILHCDEFRDFFP 39 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~~~~~Lp 39 (241)
+.++|.|+|-|| +++-++..+..
T Consensus 60 ~~~~liGSSLGG----yyA~~La~~~g 82 (180)
T PRK04940 60 ERPLICGVGLGG----YWAERIGFLCG 82 (180)
T ss_pred CCcEEEEeChHH----HHHHHHHHHHC
Confidence 579999999999 88888888764
No 69
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=31.99 E-value=22 Score=30.54 Aligned_cols=28 Identities=25% Similarity=0.468 Sum_probs=19.3
Q ss_pred hhHHHhhhhhhhhhhhcccChhhHHHHHhHH
Q 026241 2 DDLMSKGMRHAHQALLSGCSAGGLASILHCD 32 (241)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGl~~~l~~D 32 (241)
+.|..+|+ .--+++|.|||++-+.+.+-
T Consensus 18 ~aL~e~g~---~~d~i~GtS~GAl~aa~~a~ 45 (215)
T cd07209 18 KALAEAGI---EPDIISGTSIGAINGALIAG 45 (215)
T ss_pred HHHHHcCC---CCCEEEEECHHHHHHHHHHc
Confidence 34555665 45589999999986655543
No 70
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=31.61 E-value=22 Score=29.77 Aligned_cols=21 Identities=24% Similarity=0.194 Sum_probs=16.9
Q ss_pred hhhhhcccChhhHHHHHhHHH
Q 026241 13 HQALLSGCSAGGLASILHCDE 33 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~ 33 (241)
++++|.|.|.||.=++..+-.
T Consensus 96 ~~~~liG~S~Gg~ia~~~a~~ 116 (288)
T TIGR01250 96 DKFYLLGHSWGGMLAQEYALK 116 (288)
T ss_pred CcEEEEEeehHHHHHHHHHHh
Confidence 459999999999977776643
No 71
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=31.60 E-value=31 Score=31.17 Aligned_cols=53 Identities=19% Similarity=0.267 Sum_probs=36.7
Q ss_pred hHHH-hhhhhhhhhhhcccChhhHHHHHhHHHHhhhCCCcce--EEEeccccccccC
Q 026241 3 DLMS-KGMRHAHQALLSGCSAGGLASILHCDEFRDFFPRTTR--VKCLSDAGLFLDA 56 (241)
Q Consensus 3 dLl~-~Gl~~A~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~--V~~l~DSGfFld~ 56 (241)
+|.. .|+....++.|.|.|=||.|++.-+. ++...-++.. +++.+=.|.=.|.
T Consensus 60 ~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~-l~~~YApeL~~~l~Gaa~gg~~~dl 115 (290)
T PF03583_consen 60 NLPPKLGLSPSSRVALWGYSQGGQAALWAAE-LAPSYAPELNRDLVGAAAGGPPADL 115 (290)
T ss_pred hcccccCCCCCCCEEEEeeCccHHHHHHHHH-HhHHhCcccccceeEEeccCCccCH
Confidence 3444 37777889999999999999976554 4444334555 8888766654443
No 72
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=30.17 E-value=26 Score=30.64 Aligned_cols=24 Identities=17% Similarity=0.263 Sum_probs=18.2
Q ss_pred hhhhhcccChhhHHHHHhHHHHhh
Q 026241 13 HQALLSGCSAGGLASILHCDEFRD 36 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~~~~ 36 (241)
+.++|.|.|.||.-++..+=+..+
T Consensus 102 ~~~~lvGhS~Gg~va~~~a~~~p~ 125 (294)
T PLN02824 102 DPAFVICNSVGGVVGLQAAVDAPE 125 (294)
T ss_pred CCeEEEEeCHHHHHHHHHHHhChh
Confidence 678999999999877766544333
No 73
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=29.54 E-value=24 Score=31.02 Aligned_cols=28 Identities=32% Similarity=0.469 Sum_probs=19.0
Q ss_pred hhHHHhhhhhhhhhhhcccChhhHHHHHhH
Q 026241 2 DDLMSKGMRHAHQALLSGCSAGGLASILHC 31 (241)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGl~~~l~~ 31 (241)
+.|+.+|+. .-=+++|.|||++=+...+
T Consensus 18 ~al~e~~~~--~fd~i~GtSaGAi~a~~~~ 45 (266)
T cd07208 18 DAFLEAGIR--PFDLVIGVSAGALNAASYL 45 (266)
T ss_pred HHHHHcCCC--CCCEEEEECHHHHhHHHHH
Confidence 345556664 3448899999998766543
No 74
>PLN00021 chlorophyllase
Probab=29.50 E-value=22 Score=32.61 Aligned_cols=24 Identities=21% Similarity=0.171 Sum_probs=19.3
Q ss_pred hhhhhhcccChhhHHHHHhHHHHh
Q 026241 12 AHQALLSGCSAGGLASILHCDEFR 35 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~~ 35 (241)
.+++.|.|+|+||..++.-+-...
T Consensus 125 ~~~v~l~GHS~GG~iA~~lA~~~~ 148 (313)
T PLN00021 125 LSKLALAGHSRGGKTAFALALGKA 148 (313)
T ss_pred hhheEEEEECcchHHHHHHHhhcc
Confidence 367999999999999887765443
No 75
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=29.13 E-value=24 Score=28.48 Aligned_cols=24 Identities=21% Similarity=0.335 Sum_probs=19.0
Q ss_pred hhhhhhcccChhhHHHHHhHHHHh
Q 026241 12 AHQALLSGCSAGGLASILHCDEFR 35 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~~ 35 (241)
.+.++|.|.|+||.-++..+-+..
T Consensus 69 ~~~~~l~G~S~Gg~ia~~~a~~~~ 92 (251)
T TIGR03695 69 IEPFFLVGYSMGGRIALYYALQYP 92 (251)
T ss_pred CCeEEEEEeccHHHHHHHHHHhCc
Confidence 357889999999998888776543
No 76
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=29.01 E-value=33 Score=30.61 Aligned_cols=28 Identities=18% Similarity=0.096 Sum_probs=20.7
Q ss_pred hhhhhhhhhhcccChhhHHHHHhHHHHh
Q 026241 8 GMRHAHQALLSGCSAGGLASILHCDEFR 35 (241)
Q Consensus 8 Gl~~A~~viLsG~SAGGl~~~l~~D~~~ 35 (241)
-..+++.+++.|+|||+-=++.-+-+.|
T Consensus 131 ~~~n~k~l~~gGHSaGAHLa~qav~R~r 158 (270)
T KOG4627|consen 131 YTENTKVLTFGGHSAGAHLAAQAVMRQR 158 (270)
T ss_pred hcccceeEEEcccchHHHHHHHHHHHhc
Confidence 3568899999999999976655554433
No 77
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=27.80 E-value=36 Score=30.53 Aligned_cols=29 Identities=24% Similarity=0.374 Sum_probs=19.6
Q ss_pred hhhhhhcccChhhHHHHHhHHHHh--hhCCC
Q 026241 12 AHQALLSGCSAGGLASILHCDEFR--DFFPR 40 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~~--~~Lp~ 40 (241)
-+++-+.|+|.||++++...-.-. ..||+
T Consensus 102 ~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~ 132 (255)
T PF06028_consen 102 FKKFNLVGHSMGGLSWTYYLENYGNDKNLPK 132 (255)
T ss_dssp -SEEEEEEETHHHHHHHHHHHHCTTGTTS-E
T ss_pred CCEEeEEEECccHHHHHHHHHHhccCCCCcc
Confidence 356778999999999987655532 23665
No 78
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=27.49 E-value=35 Score=33.75 Aligned_cols=36 Identities=19% Similarity=0.241 Sum_probs=27.2
Q ss_pred hhhhhhhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEec
Q 026241 8 GMRHAHQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLS 48 (241)
Q Consensus 8 Gl~~A~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~ 48 (241)
|++ ++++||||=|+|--||+++. +.|.+.+-|.+=|
T Consensus 353 gF~-~~qLILSGlSMGTfgAlYYg----a~l~P~AIiVgKP 388 (511)
T TIGR03712 353 GFD-HDQLILSGLSMGTFGALYYG----AKLSPHAIIVGKP 388 (511)
T ss_pred CCC-HHHeeeccccccchhhhhhc----ccCCCceEEEcCc
Confidence 665 57899999999999999876 5565555565544
No 79
>TIGR00300 conserved hypothetical protein TIGR00300. All members of the family come from genome projects. A partial length search brings in two plant lysine-ketoglutarate reductase/saccharopine dehydrogenase bifunctional enzymes hitting the N-terminal region of the family.
Probab=26.98 E-value=58 Score=31.29 Aligned_cols=38 Identities=21% Similarity=0.400 Sum_probs=32.6
Q ss_pred hHHHhhhhhhhhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEe
Q 026241 3 DLMSKGMRHAHQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCL 47 (241)
Q Consensus 3 dLl~~Gl~~A~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l 47 (241)
+-|++-+++|+.|| -+||+||.=-+-+++|+.+++.|+
T Consensus 331 ~amR~~~~~a~~vi-------mlaTmLHSIAtGNm~Ps~v~~~cV 368 (407)
T TIGR00300 331 SKMRELLQGADMVL-------MLSTMLHSIAVGNLLPSGVKTICV 368 (407)
T ss_pred HHHHHHhccCCeeh-------hHHHHHHHHhhcccccccceEEEE
Confidence 45667788999999 799999999999999998877665
No 80
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=26.81 E-value=38 Score=28.98 Aligned_cols=27 Identities=30% Similarity=0.385 Sum_probs=20.9
Q ss_pred hhhhhhcccChhhHHHHHhHHHHhhhC
Q 026241 12 AHQALLSGCSAGGLASILHCDEFRDFF 38 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~~~~L 38 (241)
.++++|.|+|.||.-++..+-+..+++
T Consensus 100 ~~~~~lvG~S~Gg~ia~~~a~~~p~~v 126 (282)
T TIGR03343 100 IEKAHLVGNSMGGATALNFALEYPDRI 126 (282)
T ss_pred CCCeeEEEECchHHHHHHHHHhChHhh
Confidence 357899999999999888776544444
No 81
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=26.14 E-value=22 Score=36.29 Aligned_cols=24 Identities=33% Similarity=0.591 Sum_probs=21.7
Q ss_pred hhHHHhhhhhhhhhhhcccChhhH
Q 026241 2 DDLMSKGMRHAHQALLSGCSAGGL 25 (241)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGl 25 (241)
+.|..+|..+-+++-+.|.|||||
T Consensus 538 eyLve~gyt~~~kL~i~G~SaGGl 561 (712)
T KOG2237|consen 538 EYLVENGYTQPSKLAIEGGSAGGL 561 (712)
T ss_pred HHHHHcCCCCccceeEecccCccc
Confidence 568888999999999999999997
No 82
>PLN02753 triacylglycerol lipase
Probab=26.04 E-value=88 Score=31.22 Aligned_cols=54 Identities=19% Similarity=0.267 Sum_probs=36.4
Q ss_pred hhhhhhcccChhhHHHHHhHHHHhhh-CCC-----cceEEEeccccccccCCCCCchhhHHhhhhc
Q 026241 12 AHQALLSGCSAGGLASILHCDEFRDF-FPR-----TTRVKCLSDAGLFLDAVDVSGGHTLRNLYSG 71 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~~~~-Lp~-----~~~V~~l~DSGfFld~~~~~g~~~~~~~~~~ 71 (241)
-..|+++|+|-||-=+.|.+-+++.. ++. .+.|.+++-+ .+--|+..+...++.
T Consensus 311 ~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFG------sPRVGN~aFA~~~~~ 370 (531)
T PLN02753 311 DLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYG------GPRVGNVRFKDRMEE 370 (531)
T ss_pred CceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeC------CCCccCHHHHHHHHh
Confidence 35899999999999888888888764 321 2334444422 355677777776653
No 83
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=25.83 E-value=32 Score=29.81 Aligned_cols=26 Identities=35% Similarity=0.539 Sum_probs=18.3
Q ss_pred hHHHhhhhhhhhhhhcccChhhHHHHHhH
Q 026241 3 DLMSKGMRHAHQALLSGCSAGGLASILHC 31 (241)
Q Consensus 3 dLl~~Gl~~A~~viLsG~SAGGl~~~l~~ 31 (241)
.|...|+. --+++|.|||++-+.+.+
T Consensus 21 aL~e~gi~---~~~i~GtSaGAi~aa~~a 46 (221)
T cd07210 21 ALLEMGLE---PSAISGTSAGALVGGLFA 46 (221)
T ss_pred HHHHcCCC---ceEEEEeCHHHHHHHHHH
Confidence 44555553 347999999999777665
No 84
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=25.64 E-value=32 Score=31.54 Aligned_cols=29 Identities=24% Similarity=0.431 Sum_probs=20.3
Q ss_pred hhHHHhhhhhhhhhhhcccChhhHHHHHhHHH
Q 026241 2 DDLMSKGMRHAHQALLSGCSAGGLASILHCDE 33 (241)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGl~~~l~~D~ 33 (241)
+.|+.+|+. --+++|+|||++-+.+++-.
T Consensus 35 ~aLee~gi~---~d~v~GtSaGAi~ga~ya~g 63 (306)
T cd07225 35 KALEEAGIP---VDMVGGTSIGAFIGALYAEE 63 (306)
T ss_pred HHHHHcCCC---CCEEEEECHHHHHHHHHHcC
Confidence 345556663 56889999999877776643
No 85
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=25.27 E-value=40 Score=32.68 Aligned_cols=21 Identities=19% Similarity=0.195 Sum_probs=17.4
Q ss_pred hhhhhhcccChhhHHHHHhHH
Q 026241 12 AHQALLSGCSAGGLASILHCD 32 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D 32 (241)
.+.|+|.|+|.||+-+...+.
T Consensus 161 ~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 161 GKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred CCCEEEEEECHhHHHHHHHHH
Confidence 468999999999998886553
No 86
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=25.06 E-value=37 Score=29.91 Aligned_cols=19 Identities=16% Similarity=0.195 Sum_probs=16.7
Q ss_pred hhhhhcccChhhHHHHHhH
Q 026241 13 HQALLSGCSAGGLASILHC 31 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~ 31 (241)
++++|.|.|.||+-++..+
T Consensus 100 ~~i~l~G~S~Gg~~a~~~a 118 (274)
T TIGR03100 100 RRIVAWGLCDAASAALLYA 118 (274)
T ss_pred CcEEEEEECHHHHHHHHHh
Confidence 5699999999999988775
No 87
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=24.94 E-value=30 Score=30.93 Aligned_cols=19 Identities=32% Similarity=0.335 Sum_probs=15.6
Q ss_pred hhhhcccChhhHHHHHhHH
Q 026241 14 QALLSGCSAGGLASILHCD 32 (241)
Q Consensus 14 ~viLsG~SAGGl~~~l~~D 32 (241)
.++|.|.|.||.-++..+.
T Consensus 135 ~i~l~GhSmGG~ia~~~a~ 153 (330)
T PLN02298 135 PRFLYGESMGGAICLLIHL 153 (330)
T ss_pred CEEEEEecchhHHHHHHHh
Confidence 5899999999998876543
No 88
>PLN00413 triacylglycerol lipase
Probab=24.82 E-value=61 Score=31.91 Aligned_cols=24 Identities=33% Similarity=0.390 Sum_probs=19.4
Q ss_pred hhhhhcccChhhHHHHHhHHHHhh
Q 026241 13 HQALLSGCSAGGLASILHCDEFRD 36 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~~~~ 36 (241)
.+++++|+|.||-=+.+.+-+++.
T Consensus 284 ~kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 284 SKFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred CeEEEEecCHHHHHHHHHHHHHHh
Confidence 369999999999888887776653
No 89
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=24.75 E-value=35 Score=27.72 Aligned_cols=28 Identities=21% Similarity=0.338 Sum_probs=19.8
Q ss_pred hHHHhhhhhhhhhhhcccChhhHHHHHhH
Q 026241 3 DLMSKGMRHAHQALLSGCSAGGLASILHC 31 (241)
Q Consensus 3 dLl~~Gl~~A~~viLsG~SAGGl~~~l~~ 31 (241)
-|..+|+.+ .--.++|.|||++-+...+
T Consensus 19 ~l~~~~~~~-~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 19 ALAERGLLD-CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHhCCcc-CCCEEEEEcHHHHHHHHHh
Confidence 344455542 3457899999999888887
No 90
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=24.32 E-value=38 Score=27.41 Aligned_cols=21 Identities=29% Similarity=0.385 Sum_probs=16.7
Q ss_pred hhhhhcccChhhHHHHHhHHH
Q 026241 13 HQALLSGCSAGGLASILHCDE 33 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~ 33 (241)
+.+.|.|.|.||.-++..+-.
T Consensus 79 ~~v~liG~S~Gg~~a~~~a~~ 99 (251)
T TIGR02427 79 ERAVFCGLSLGGLIAQGLAAR 99 (251)
T ss_pred CceEEEEeCchHHHHHHHHHH
Confidence 568999999999877766543
No 91
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=24.09 E-value=75 Score=23.93 Aligned_cols=44 Identities=18% Similarity=0.207 Sum_probs=30.4
Q ss_pred HhhhhhhhhhhhcccCh-hhHHHHHhHHHHhhhCC-CcceEEEecc
Q 026241 6 SKGMRHAHQALLSGCSA-GGLASILHCDEFRDFFP-RTTRVKCLSD 49 (241)
Q Consensus 6 ~~Gl~~A~~viLsG~SA-GGl~~~l~~D~~~~~Lp-~~~~V~~l~D 49 (241)
+.||.+.++.+-+=.++ ++.+.=.|.+.+++.|. +.++|.|+|.
T Consensus 7 ~egl~~~qq~~~~~~~~~~~~~~~~~~~~l~~~LG~QdV~V~Gip~ 52 (84)
T PF07643_consen 7 PEGLKRLQQFLESSNSRSSPAGPAAWVDGLRQALGPQDVTVYGIPA 52 (84)
T ss_pred HHHHHHHHHHHHHHhccccccCHHHHHHHHHHHhCCceeEEEccCC
Confidence 35788887776553333 33333348899999995 5999999985
No 92
>cd07223 Pat_PNPLA5-mammals Patatin-like phospholipase domain containing protein 5. PNPLA5, also known as GS2L (GS2-like), plays a role in regulation of adipocyte differentiation. PNPLA5 is expressed in brain tissue in high mRNA levels and low levels in liver tissue. There is no concrete evidence in support of the enzymatic activity of GS2L. This family includes patatin-like proteins: GS2L (GS2-like) and PNPLA5 (Patatin-like phospholipase domain-containing protein 5) reported exclusively in mammals.
Probab=24.04 E-value=53 Score=31.62 Aligned_cols=15 Identities=27% Similarity=0.481 Sum_probs=13.0
Q ss_pred hcccChhhHHHHHhH
Q 026241 17 LSGCSAGGLASILHC 31 (241)
Q Consensus 17 LsG~SAGGl~~~l~~ 31 (241)
++|.|||+|.+-+++
T Consensus 45 iaGaSAGAL~aa~~a 59 (405)
T cd07223 45 IYGSSSGALNAVSIV 59 (405)
T ss_pred eeeeCHHHHHHHHHH
Confidence 889999999888665
No 93
>KOG2214 consensus Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=23.89 E-value=32 Score=34.10 Aligned_cols=25 Identities=28% Similarity=0.623 Sum_probs=16.6
Q ss_pred hhcccChhhHHHHH----hHHHHhhhCCC
Q 026241 16 LLSGCSAGGLASIL----HCDEFRDFFPR 40 (241)
Q Consensus 16 iLsG~SAGGl~~~l----~~D~~~~~Lp~ 40 (241)
|++||||||+=+=+ +-..+..+|..
T Consensus 205 IIsGsS~GaivAsl~~v~~~eEl~~Ll~~ 233 (543)
T KOG2214|consen 205 IISGSSAGAIVASLVGVRSNEELKQLLTN 233 (543)
T ss_pred hhcCCchhHHHHHHHhhcchHHHHHHhcc
Confidence 78999999974433 33555555543
No 94
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=23.71 E-value=52 Score=29.54 Aligned_cols=48 Identities=21% Similarity=0.222 Sum_probs=29.7
Q ss_pred hhhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEeccccccccCCCCCchhhHHhhhh
Q 026241 12 AHQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGLFLDAVDVSGGHTLRNLYS 70 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGfFld~~~~~g~~~~~~~~~ 70 (241)
.+.++|.|.|.||.=++..+-+ .|..+ . |+.|..+-++|...++.++.
T Consensus 98 ~~~v~LvG~SmGG~vAl~~A~~----~p~~v--~-----~lVL~~P~~~g~~~l~~~lr 145 (266)
T TIGR03101 98 HPPVTLWGLRLGALLALDAANP----LAAKC--N-----RLVLWQPVVSGKQQLQQFLR 145 (266)
T ss_pred CCCEEEEEECHHHHHHHHHHHh----Ccccc--c-----eEEEeccccchHHHHHHHHH
Confidence 3678999999999887765432 34322 1 23333455677777666543
No 95
>PRK11460 putative hydrolase; Provisional
Probab=23.37 E-value=39 Score=29.13 Aligned_cols=20 Identities=25% Similarity=0.350 Sum_probs=16.6
Q ss_pred hhhhhhcccChhhHHHHHhH
Q 026241 12 AHQALLSGCSAGGLASILHC 31 (241)
Q Consensus 12 A~~viLsG~SAGGl~~~l~~ 31 (241)
.++|+|.|.|.||.-++.-+
T Consensus 102 ~~~i~l~GfS~Gg~~al~~a 121 (232)
T PRK11460 102 ASATALIGFSQGAIMALEAV 121 (232)
T ss_pred hhhEEEEEECHHHHHHHHHH
Confidence 46899999999999887544
No 96
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=23.29 E-value=37 Score=32.70 Aligned_cols=28 Identities=25% Similarity=0.554 Sum_probs=19.5
Q ss_pred hHHHhhhhhhhhhhhcccChhhHHHHHhHHH
Q 026241 3 DLMSKGMRHAHQALLSGCSAGGLASILHCDE 33 (241)
Q Consensus 3 dLl~~Gl~~A~~viLsG~SAGGl~~~l~~D~ 33 (241)
-|+.+||.- =+++|+|||++-+-+.|-+
T Consensus 94 aL~E~gl~p---~vIsGTSaGAivAal~as~ 121 (421)
T cd07230 94 ALFEANLLP---RIISGSSAGSIVAAILCTH 121 (421)
T ss_pred HHHHcCCCC---CEEEEECHHHHHHHHHHcC
Confidence 455556542 2799999999987766643
No 97
>KOG3493 consensus Ubiquitin-like protein [Posttranslational modification, protein turnover, chaperones]
Probab=23.22 E-value=48 Score=23.96 Aligned_cols=18 Identities=33% Similarity=0.586 Sum_probs=15.0
Q ss_pred HhhhCCCcceEEEecccc
Q 026241 34 FRDFFPRTTRVKCLSDAG 51 (241)
Q Consensus 34 ~~~~Lp~~~~V~~l~DSG 51 (241)
+.++|.++++|||.+|--
T Consensus 6 ~nDrLGKKVRvKCn~dDt 23 (73)
T KOG3493|consen 6 LNDRLGKKVRVKCNTDDT 23 (73)
T ss_pred hhhhcCceEEEEeCCccc
Confidence 467899999999999843
No 98
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=23.09 E-value=68 Score=30.22 Aligned_cols=40 Identities=18% Similarity=0.216 Sum_probs=24.3
Q ss_pred hhhhhcccChhhHHHHHhHHHHhhhCCCcceEEEecccccccc
Q 026241 13 HQALLSGCSAGGLASILHCDEFRDFFPRTTRVKCLSDAGLFLD 55 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~~~~~Lp~~~~V~~l~DSGfFld 55 (241)
+.++|.|+|.||.-++..+-+..+++. .+..+.-+|++.+
T Consensus 176 ~~~~lvGhS~GG~la~~~a~~~p~~v~---~lvl~~p~~~~~~ 215 (402)
T PLN02894 176 SNFILLGHSFGGYVAAKYALKHPEHVQ---HLILVGPAGFSSE 215 (402)
T ss_pred CCeEEEEECHHHHHHHHHHHhCchhhc---EEEEECCccccCC
Confidence 468999999999988876644333221 2333344565543
No 99
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=22.98 E-value=45 Score=31.73 Aligned_cols=40 Identities=23% Similarity=0.328 Sum_probs=28.5
Q ss_pred hhhhhhhhhcccChhhHHHHHhH----HHHhhhCCCcceEEEec
Q 026241 9 MRHAHQALLSGCSAGGLASILHC----DEFRDFFPRTTRVKCLS 48 (241)
Q Consensus 9 l~~A~~viLsG~SAGGl~~~l~~----D~~~~~Lp~~~~V~~l~ 48 (241)
|.=.+...+.|.|.||.=++-|+ |+++..++-.+..+.-+
T Consensus 143 LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~ 186 (368)
T COG2021 143 LGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSA 186 (368)
T ss_pred cCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCH
Confidence 33334666889999999999888 88888887544444444
No 100
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=22.91 E-value=37 Score=29.73 Aligned_cols=35 Identities=17% Similarity=0.293 Sum_probs=22.1
Q ss_pred hhHHHhhhhhhhhhhhcccChhhHHHHHhHHHHhhhCCC
Q 026241 2 DDLMSKGMRHAHQALLSGCSAGGLASILHCDEFRDFFPR 40 (241)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGl~~~l~~D~~~~~Lp~ 40 (241)
++|..+-=-+.++|.++|-|+||--+. .+....|.
T Consensus 86 ~~v~~~~~iD~~RVyv~G~S~Gg~ma~----~la~~~pd 120 (220)
T PF10503_consen 86 DYVAARYNIDPSRVYVTGLSNGGMMAN----VLACAYPD 120 (220)
T ss_pred HhHhhhcccCCCceeeEEECHHHHHHH----HHHHhCCc
Confidence 344444223567999999999995543 44445565
No 101
>PF00086 Thyroglobulin_1: Thyroglobulin type-1 repeat; InterPro: IPR000716 Thyroglobulin (Tg) is a large glycoprotein specific to the thyroid gland and is the precursor of the iodinated thyroid hormones thyroxine (T4) and triiodothyronine (T3). The N-terminal section of Tg contains 10 repeats of a domain of about 65 amino acids which is known as the Tg type-1 repeat [, ]. Such a domain has also been found as a single or repeated sequence in the HLA class II associated invariant chain []; human pancreatic carcinoma marker proteins GA733-1 and GA733-2 []; nidogen (entactin), a sulphated glycoprotein which is widely distributed in basement membranes and that is tightly associated with laminin; insulin-like growth factor binding proteins (IGFBP) []; saxiphilin, a transferrin-like protein from Rana catesbeiana (Bull frog) that binds specifically to the neurotoxin saxitoxin []; chum salmon egg cysteine proteinase inhibitor, and equistatin, a thiol-protease inhibitor from Actinia equina (sea anemone) []. The existence of Thyr-1 domains in such a wide variety of proteins raises questions about their activity and function, and their interactions with neighbouring domains. The Thyr-1 and related domains belong to MEROPS proteinase inhibitor family I31, clan IX. Equistatin from A. equina is composed of three Thyr-1 domains; as with other proteins that contains Thyr-1 domains, the thyropins, they bind reversibly and tightly to cysteine proteases (inhibitor family C1). In equistatin inhibition of papain is a function of domain-1. Unusually domain-2 inhibits cathepsin D, an aspartic protease (inhibitor family A1) and has no activity against papain. Domain-3, does not inhibit either papain or cathepsin D, and its function or its target peptidase has yet to be determined [, ].; PDB: 2H7T_A 2DSR_G 1RMJ_A 1ICF_I 1L3H_A 1ZT3_A 2DSQ_H 1ZT5_A.
Probab=22.63 E-value=90 Score=21.84 Aligned_cols=27 Identities=19% Similarity=0.397 Sum_probs=16.9
Q ss_pred HHHHHHHhcccCCCCceEEEcCccccc
Q 026241 159 NQVLKAVRGFSMSKQNGLFINSCFAHC 185 (241)
Q Consensus 159 ~~~~~~l~~~~~~~~~G~F~~SC~~Hc 185 (241)
.++++.++........++|+|.|-.+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~P~C~~~G 32 (68)
T PF00086_consen 6 ERALERLESERSSSSDGVFVPQCDEDG 32 (68)
T ss_dssp HHHHHHHHHHSTSCCSECEEE-B-TTS
T ss_pred HHHHHHHHHhcccCCCCCcCceeCCCC
Confidence 345555554446677899999999774
No 102
>PLN02932 3-ketoacyl-CoA synthase
Probab=22.57 E-value=75 Score=31.25 Aligned_cols=39 Identities=23% Similarity=0.180 Sum_probs=29.6
Q ss_pred hhh-hhhhhhhc--ccChhhHHHHHhHHHHhhhCCCcceEEE
Q 026241 8 GMR-HAHQALLS--GCSAGGLASILHCDEFRDFFPRTTRVKC 46 (241)
Q Consensus 8 Gl~-~A~~viLs--G~SAGGl~~~l~~D~~~~~Lp~~~~V~~ 46 (241)
||+ ++...-|+ |||||-.|.-+-.|.++..-.+.+-|.+
T Consensus 195 Glr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVs 236 (478)
T PLN02932 195 KLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVS 236 (478)
T ss_pred CCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEE
Confidence 896 77788886 9999999988888888876544444433
No 103
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=22.36 E-value=34 Score=27.69 Aligned_cols=11 Identities=36% Similarity=0.724 Sum_probs=9.5
Q ss_pred hhhcccChhhH
Q 026241 15 ALLSGCSAGGL 25 (241)
Q Consensus 15 viLsG~SAGGl 25 (241)
+++.|.|||.+
T Consensus 70 ~vi~G~SAGA~ 80 (154)
T PF03575_consen 70 GVIIGTSAGAM 80 (154)
T ss_dssp SEEEEETHHHH
T ss_pred CEEEEEChHHh
Confidence 68899999983
No 104
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=21.95 E-value=50 Score=30.04 Aligned_cols=24 Identities=25% Similarity=0.468 Sum_probs=18.3
Q ss_pred hh-hhhcccChhhHHHHHhHHHHhh
Q 026241 13 HQ-ALLSGCSAGGLASILHCDEFRD 36 (241)
Q Consensus 13 ~~-viLsG~SAGGl~~~l~~D~~~~ 36 (241)
+. ++|.|.|.||.=++..+-..-+
T Consensus 126 ~~~~~l~G~S~Gg~ia~~~a~~~p~ 150 (351)
T TIGR01392 126 EQIAAVVGGSMGGMQALEWAIDYPE 150 (351)
T ss_pred CCceEEEEECHHHHHHHHHHHHChH
Confidence 45 8999999999888777655433
No 105
>PF13130 DUF3952: Domain of unknown function (DUF3952)
Probab=21.44 E-value=33 Score=26.76 Aligned_cols=37 Identities=30% Similarity=0.492 Sum_probs=25.2
Q ss_pred hhhcccChhhHHHHHhHHHHhhhCCC--cceEEEecccccc
Q 026241 15 ALLSGCSAGGLASILHCDEFRDFFPR--TTRVKCLSDAGLF 53 (241)
Q Consensus 15 viLsG~SAGGl~~~l~~D~~~~~Lp~--~~~V~~l~DSGfF 53 (241)
.||+|||-|- +=+--.+|-..|.. =-+|.-.||-|+=
T Consensus 2 ~LlsgC~fge--tKIeYe~~VKALDEGDMktVMSASDdGYA 40 (107)
T PF13130_consen 2 SLLSGCGFGE--TKIEYERFVKALDEGDMKTVMSASDDGYA 40 (107)
T ss_pred ccccccccce--eeeehHHHHHHhcccchhheeccCCCcee
Confidence 5899999998 33334455555654 2468888998873
No 106
>PF06658 DUF1168: Protein of unknown function (DUF1168); InterPro: IPR009548 This family consists of several hypothetical eukaryotic proteins of unknown function.
Probab=21.28 E-value=33 Score=28.27 Aligned_cols=16 Identities=31% Similarity=0.414 Sum_probs=12.2
Q ss_pred hhcccChhhHHHHHhH
Q 026241 16 LLSGCSAGGLASILHC 31 (241)
Q Consensus 16 iLsG~SAGGl~~~l~~ 31 (241)
-+.|||||+-.-.+|+
T Consensus 25 NV~GSSAGAGSGeFHv 40 (142)
T PF06658_consen 25 NVQGSSAGAGSGEFHV 40 (142)
T ss_pred cccccccccCccHHHH
Confidence 4679999987666665
No 107
>PF02960 K1: K1 glycoprotein; InterPro: IPR004121 Current genotyping systems for Human herpesvirus 8 (HHV-8) are based on the highly variable gene encoding the K1 glycoprotein []. This entry represents the C-terminal region of the K1 glycoprotein.
Probab=21.11 E-value=35 Score=27.16 Aligned_cols=23 Identities=39% Similarity=0.703 Sum_probs=19.3
Q ss_pred cccccccccCccccCCCcccCCchHHhhhccccc
Q 026241 182 FAHCQTERQDTWFADDSPVVGNKAIAIAVGDWYF 215 (241)
Q Consensus 182 ~~Hc~~~~~~~W~~~~~p~v~~~tia~Al~~W~f 215 (241)
|+||| .++-+|||.++-|.|.|-
T Consensus 92 fahcq-----------kq~dSnkTvpqql~dyys 114 (130)
T PF02960_consen 92 FAHCQ-----------KQRDSNKTVPQQLRDYYS 114 (130)
T ss_pred HHHhc-----------ccccccccchHHHHhhhh
Confidence 78997 357789999999999875
No 108
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=20.85 E-value=47 Score=30.55 Aligned_cols=17 Identities=35% Similarity=0.618 Sum_probs=13.8
Q ss_pred hhhhhcccChhhHHHHH
Q 026241 13 HQALLSGCSAGGLASIL 29 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l 29 (241)
+.++|.|.|.||+-++.
T Consensus 155 ~~~~lvGhS~Gg~ia~~ 171 (360)
T PLN02679 155 KPTVLIGNSVGSLACVI 171 (360)
T ss_pred CCeEEEEECHHHHHHHH
Confidence 57899999999976554
No 109
>COG1239 ChlI Mg-chelatase subunit ChlI [Coenzyme metabolism]
Probab=20.79 E-value=59 Score=31.51 Aligned_cols=31 Identities=23% Similarity=0.515 Sum_probs=23.1
Q ss_pred CCchHHhhhcccccccccceecCCCCCCCCCCC
Q 026241 202 GNKAIAIAVGDWYFDRSGIKIVDCPYPCDKTCH 234 (241)
Q Consensus 202 ~~~tia~Al~~W~f~r~~~~~iDc~yPcNptC~ 234 (241)
...|++.||.+=+-+...+ ++|||+|+|+=+
T Consensus 50 aKSt~~Rala~LLp~~~~V--~gc~f~cdP~~P 80 (423)
T COG1239 50 AKSTLARALADLLPEIEVV--IGCPFNCDPDDP 80 (423)
T ss_pred cHHHHHHHHHHhCCcccee--cCCCCCCCCCCh
Confidence 3457888988887766655 499999988644
No 110
>PRK10279 hypothetical protein; Provisional
Probab=20.75 E-value=46 Score=30.47 Aligned_cols=27 Identities=26% Similarity=0.534 Sum_probs=19.2
Q ss_pred hhHHHhhhhhhhhhhhcccChhhHHHHHhH
Q 026241 2 DDLMSKGMRHAHQALLSGCSAGGLASILHC 31 (241)
Q Consensus 2 ~dLl~~Gl~~A~~viLsG~SAGGl~~~l~~ 31 (241)
+-|...|+. --+++|+|||++-+-+.+
T Consensus 25 ~aL~E~gi~---~d~i~GtS~GAlvga~yA 51 (300)
T PRK10279 25 NALKKVGIE---IDIVAGCSIGSLVGAAYA 51 (300)
T ss_pred HHHHHcCCC---cCEEEEEcHHHHHHHHHH
Confidence 345555663 568999999998776655
No 111
>PLN02719 triacylglycerol lipase
Probab=20.60 E-value=1.3e+02 Score=30.05 Aligned_cols=52 Identities=15% Similarity=0.250 Sum_probs=35.0
Q ss_pred hhhhhcccChhhHHHHHhHHHHhhh-CCC-----cceEEEeccccccccCCCCCchhhHHhhhh
Q 026241 13 HQALLSGCSAGGLASILHCDEFRDF-FPR-----TTRVKCLSDAGLFLDAVDVSGGHTLRNLYS 70 (241)
Q Consensus 13 ~~viLsG~SAGGl~~~l~~D~~~~~-Lp~-----~~~V~~l~DSGfFld~~~~~g~~~~~~~~~ 70 (241)
..|+++|+|-||-=+.|.+-+++.. ++. .+.|.+++- ..+--|+..+...++
T Consensus 298 ~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTF------GsPRVGN~~Fa~~~~ 355 (518)
T PLN02719 298 LSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTY------GGPRVGNIRFKERIE 355 (518)
T ss_pred ceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEe------cCCCccCHHHHHHHH
Confidence 4799999999998888888888775 432 123444332 235557777776665
No 112
>PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis. RsgA is an unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover. It is dispensible for viability, but important for overall fitness. The intrinsic GTPase activity is stimulated by the presence of 30S (160-fold increase in kcat) or 70S (96 fold increase in kcat) ribosomes []. The GTPase is inhibited by aminoglycoside antibiotics such as neomycin and paromycin [] streptomycin and spectinomycin []. This inhibition is not due to competition for binding sites on the 30S or 70S ribosome []. ; GO: 0003924 GTPase activity, 0005525 GTP binding; PDB: 2YKR_W 2YV5_A 1T9H_A 2RCN_A 4A2I_V 1U0L_B.
Probab=20.55 E-value=59 Score=27.18 Aligned_cols=90 Identities=20% Similarity=0.311 Sum_probs=51.4
Q ss_pred hhhhhhhhhhcccChhhHHHHHhH---------HHHhhhCCC------cceEEEeccccccccCCCCCc-------hhhH
Q 026241 8 GMRHAHQALLSGCSAGGLASILHC---------DEFRDFFPR------TTRVKCLSDAGLFLDAVDVSG-------GHTL 65 (241)
Q Consensus 8 Gl~~A~~viLsG~SAGGl~~~l~~---------D~~~~~Lp~------~~~V~~l~DSGfFld~~~~~g-------~~~~ 65 (241)
-|++ +.++|.|-|==|=.+++|. ..+++.+.+ .+++.-+++.|+-+|.|-++- ...+
T Consensus 32 ~l~~-k~~vl~G~SGvGKSSLiN~L~~~~~~~t~~is~~~~rGkHTTt~~~l~~l~~g~~iIDTPGf~~~~l~~~~~~~l 110 (161)
T PF03193_consen 32 LLKG-KTSVLLGQSGVGKSSLINALLPEAKQKTGEISEKTGRGKHTTTHRELFPLPDGGYIIDTPGFRSFGLWHIDPEEL 110 (161)
T ss_dssp HHTT-SEEEEECSTTSSHHHHHHHHHTSS----S--------------SEEEEEETTSEEEECSHHHHT--GCCS-HHHH
T ss_pred HhcC-CEEEEECCCCCCHHHHHHHHHhhcchhhhhhhcccCCCcccCCCeeEEecCCCcEEEECCCCCccccccCCHHHH
Confidence 3566 8999999999898998884 233333321 457778889999999876531 2345
Q ss_pred Hhhhhchhhhc-cccccCCccccccCCCCCCCchhhhh
Q 026241 66 RNLYSGVVGLQ-GVQNNLPRICTNHLDPTSCFFPQNII 102 (241)
Q Consensus 66 ~~~~~~~v~l~-~~~~~lp~~C~~~~~~~~Cffpq~~~ 102 (241)
...|.....+- .++ -.+|.-..|| .|..-+-+-
T Consensus 111 ~~~F~e~~~~~~~Ck---F~~C~H~~Ep-~CaV~~av~ 144 (161)
T PF03193_consen 111 AQYFPEFRPLAGQCK---FRDCTHIHEP-GCAVKAAVE 144 (161)
T ss_dssp HHCSGGGHHHTTHSS---STTTTSSSST-T-HHHHHHH
T ss_pred HHHHHHhccccCCCC---ccCCCCCCCC-CChHHHHHH
Confidence 55666554432 111 2456533344 576555443
No 113
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=20.51 E-value=81 Score=29.93 Aligned_cols=39 Identities=21% Similarity=0.288 Sum_probs=26.6
Q ss_pred hhhhhhhcccChhhHHHHHhHHHHhhhCC---CcceEEEeccccc
Q 026241 11 HAHQALLSGCSAGGLASILHCDEFRDFFP---RTTRVKCLSDAGL 52 (241)
Q Consensus 11 ~A~~viLsG~SAGGl~~~l~~D~~~~~Lp---~~~~V~~l~DSGf 52 (241)
+|+++++-|.|-||. ..+.-++...- ..++...+.|.||
T Consensus 213 ka~~Ii~yG~SLGG~---Vqa~AL~~~~~~~~dgi~~~~ikDRsf 254 (365)
T PF05677_consen 213 KAKNIILYGHSLGGG---VQAEALKKEVLKGSDGIRWFLIKDRSF 254 (365)
T ss_pred ChheEEEeeccccHH---HHHHHHHhcccccCCCeeEEEEecCCc
Confidence 789999999999985 33334444221 2477777778775
Done!