BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026247
(241 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|309951230|emb|CBX43985.1| putative A-type response regulator 3 [Populus x canadensis]
Length = 242
Score = 259 bits (662), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 138/223 (61%), Positives = 176/223 (78%), Gaps = 6/223 (2%)
Query: 24 QQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDK 83
QQ+ EG+ E QQ Q +++++ FHVLAVDDS IDRK+LE LL+VSSYQVT VDSGDK
Sbjct: 21 QQKEEGE-EKHKQQRDQEGEEEEKHFHVLAVDDSFIDRKLLERLLKVSSYQVTFVDSGDK 79
Query: 84 ALEYLGLIDNLEN-NSNASPSTLSTKKEES-RVNLIMTDYCMPGMTGYDLLKRLKVSSWK 141
ALEYLGL+D+++N N+ +S S+ + ++E +VNLIMTDYCMPGM+GYDLLKR+K S WK
Sbjct: 80 ALEYLGLLDSIDNVNATSSSSSSQSPQQEGMKVNLIMTDYCMPGMSGYDLLKRVKGSYWK 139
Query: 142 DVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDN 201
DVPVVVMSSEN+PSR+ MCLEEGAEEFLLKP++LSD+EKLQ LLKS ++ D ++
Sbjct: 140 DVPVVVMSSENIPSRIRMCLEEGAEEFLLKPLQLSDVEKLQTHLLKSLDKYSSKRIDDNS 199
Query: 202 ---DNKNETSNYKSSTNSAFSKRKALSAEAPERRPKMKEVAVV 241
D+ N T + KS++N+ SKRKALS E +RRPKMK +AVV
Sbjct: 200 FNTDSSNITVSNKSNSNNIVSKRKALSPEIEDRRPKMKGLAVV 242
>gi|224066817|ref|XP_002302230.1| type-a response regulator [Populus trichocarpa]
gi|222843956|gb|EEE81503.1| type-a response regulator [Populus trichocarpa]
Length = 243
Score = 253 bits (645), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 132/210 (62%), Positives = 168/210 (80%), Gaps = 5/210 (2%)
Query: 37 QEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLEN 96
Q Q +++++ FHVLAVDDS IDRK+LE LL+VSSYQVT VDSGDKALEYLGL+D+++N
Sbjct: 34 QRDQEGEEEEKHFHVLAVDDSFIDRKLLERLLKVSSYQVTFVDSGDKALEYLGLLDSIDN 93
Query: 97 -NSNASPSTLSTKKEES-RVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVP 154
N+ +S S+ + ++E +VNLIMTDYCMPGM+GYDLLKR+K S WKDVPVVVMSSEN+P
Sbjct: 94 VNATSSSSSSQSPQQEGMKVNLIMTDYCMPGMSGYDLLKRVKGSYWKDVPVVVMSSENIP 153
Query: 155 SRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDN---DNKNETSNYK 211
SR+ MCLEEGAEEFLLKP++LSD+EKLQ LLKS ++ D ++ D+ N T + K
Sbjct: 154 SRIRMCLEEGAEEFLLKPLQLSDVEKLQTHLLKSLDKYSSKRIDDNSFNTDSSNITVSNK 213
Query: 212 SSTNSAFSKRKALSAEAPERRPKMKEVAVV 241
S++N+ SKRKALS E +RRPKMK +AVV
Sbjct: 214 SNSNNIVSKRKALSPEIEDRRPKMKGLAVV 243
>gi|388511259|gb|AFK43691.1| unknown [Lotus japonicus]
Length = 224
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 158/203 (77%), Gaps = 10/203 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNAS----PST 104
FHVLAVDDS+IDRK+LE LLR SS +VTCVDSGDKAL+YLGLID+L+N S+AS S
Sbjct: 22 FHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLDNTSSASLESPISP 81
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEG 164
++E +VNLIMTD+CMPGM+GYDLLKR+K SSWKDVPVVVMSSENVPSR++MCLEEG
Sbjct: 82 QQVEQEGIKVNLIMTDFCMPGMSGYDLLKRVKGSSWKDVPVVVMSSENVPSRISMCLEEG 141
Query: 165 AEEFLLKPVRLSDLEKLQPRLLKSPNRSC-----GNNEDSDNDNKNETSNYKSSTNSAFS 219
AE+FLLKP++LSDLEKLQP KS + SC N+ + +K +N S+ NS +
Sbjct: 142 AEKFLLKPLQLSDLEKLQPYFPKSLDESCDDDISANSSIGSDIDKLINNNNNSNNNSLIT 201
Query: 220 KRKALSAEAPER-RPKMKEVAVV 241
KRKA+S PER RPKMK +AVV
Sbjct: 202 KRKAMSPTPPERSRPKMKGLAVV 224
>gi|388505720|gb|AFK40926.1| unknown [Lotus japonicus]
Length = 224
Score = 235 bits (599), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 157/203 (77%), Gaps = 10/203 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNAS----PST 104
FHVLAVDDS+IDRK+LE LLR SS +VTCVDSGDKAL+YLGLID+L+N S+AS S
Sbjct: 22 FHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDDLDNTSSASLESPISP 81
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEG 164
++E +VNLIMTD+CMPG +GYDLLKR+K SSWKDVPVVVMSSENVPSR++MCLEEG
Sbjct: 82 QQVEQEGIKVNLIMTDFCMPGKSGYDLLKRVKGSSWKDVPVVVMSSENVPSRISMCLEEG 141
Query: 165 AEEFLLKPVRLSDLEKLQPRLLKSPNRSC-----GNNEDSDNDNKNETSNYKSSTNSAFS 219
AE+FLLKP++LSDLEKLQP KS + SC N+ + +K +N S+ NS +
Sbjct: 142 AEKFLLKPLQLSDLEKLQPYFPKSLDESCDDDISANSSIGSDIDKLINNNNNSNNNSLIT 201
Query: 220 KRKALSAEAPER-RPKMKEVAVV 241
KRKA+S PER RPKMK +AVV
Sbjct: 202 KRKAMSPTPPERSRPKMKGLAVV 224
>gi|359492520|ref|XP_002284504.2| PREDICTED: two-component response regulator ARR9-like [Vitis
vinifera]
Length = 240
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 133/226 (58%), Positives = 160/226 (70%), Gaps = 32/226 (14%)
Query: 40 QPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSN 99
Q Q+Q ++ FHVLAVDDSLIDRK+LE LL VSSY VTCV+SGDKALEYLGL+D +N++
Sbjct: 19 QQQKQLEQHFHVLAVDDSLIDRKLLEKLLTVSSYHVTCVESGDKALEYLGLLDGRDNDTT 78
Query: 100 ---------------------ASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS 138
A PS ++E +VNLIMTDYCMPGM+GYDLLKR+K S
Sbjct: 79 SSSSSSSSSSSSSSSSSSSSSAKPS----QQEGLKVNLIMTDYCMPGMSGYDLLKRVKGS 134
Query: 139 SWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRS-CGNNE 197
SWKDVPVVVMSSENVPSR+ MCLE GAE+FLLKPV+LSDLEKLQP LLKS ++ C N
Sbjct: 135 SWKDVPVVVMSSENVPSRINMCLEGGAEDFLLKPVQLSDLEKLQPHLLKSLSQYPCENIN 194
Query: 198 DSDNDNKN-----ETSNYKSSTNSAFSKRKAL-SAEAPERRPKMKE 237
S+ D++N TS S +N+ KRKAL SA+ ERR K+K+
Sbjct: 195 SSNEDDENINKNNSTSCSSSKSNNGVCKRKALVSADPLERRSKLKD 240
>gi|302141801|emb|CBI19004.3| unnamed protein product [Vitis vinifera]
Length = 232
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 132/226 (58%), Positives = 159/226 (70%), Gaps = 30/226 (13%)
Query: 40 QPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSN 99
Q Q+Q ++ FHVLAVDDSLIDRK+LE LL VSSY VTCV+SGDKALEYLGL+D +N++
Sbjct: 9 QQQKQLEQHFHVLAVDDSLIDRKLLEKLLTVSSYHVTCVESGDKALEYLGLLDGRDNDTT 68
Query: 100 ---------------------ASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS 138
A PS + + +VNLIMTDYCMPGM+GYDLLKR+K S
Sbjct: 69 SSSSSSSSSSSSSSSSSSSSSAKPS--QQEMQGLKVNLIMTDYCMPGMSGYDLLKRVKGS 126
Query: 139 SWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRS-CGNNE 197
SWKDVPVVVMSSENVPSR+ MCLE GAE+FLLKPV+LSDLEKLQP LLKS ++ C N
Sbjct: 127 SWKDVPVVVMSSENVPSRINMCLEGGAEDFLLKPVQLSDLEKLQPHLLKSLSQYPCENIN 186
Query: 198 DSDNDNKN-----ETSNYKSSTNSAFSKRKAL-SAEAPERRPKMKE 237
S+ D++N TS S +N+ KRKAL SA+ ERR K+K+
Sbjct: 187 SSNEDDENINKNNSTSCSSSKSNNGVCKRKALVSADPLERRSKLKD 232
>gi|356515915|ref|XP_003526642.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 232
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 158/212 (74%), Gaps = 21/212 (9%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA-------S 101
FHVLAVDDS+IDRK+LE LLR SS +VTCVDSGDKAL+YLGLID L++ S+
Sbjct: 23 FHVLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTTLESESSH 82
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCL 161
P ++E +VNLIMTDYCMPGM+GYDLLKR+K SSWKDVPVV+MSSENVPSR++MCL
Sbjct: 83 PPPQPLQQEGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCL 142
Query: 162 EEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDN---------KNETSNYKS 212
EEGA+EFLLKP++LSDL+KLQP LKS + SC ++S N + N ++N +
Sbjct: 143 EEGAQEFLLKPLQLSDLDKLQPYFLKSLDNSC--EKESANSSIDSNNDNVINNNSNNSNN 200
Query: 213 STNSAFSKRKALSAEAPER---RPKMKEVAVV 241
+ N+ SKRKA+S E + RPKMKE+AVV
Sbjct: 201 NNNNNISKRKAMSPEPHQEERSRPKMKELAVV 232
>gi|217075290|gb|ACJ86005.1| unknown [Medicago truncatula]
gi|388493820|gb|AFK34976.1| unknown [Medicago truncatula]
Length = 235
Score = 221 bits (564), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 159/223 (71%), Gaps = 22/223 (9%)
Query: 40 QPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL-IDNLENNS 98
QPQ +QE FHVLAVDDS+IDR +LE LLR SS +VTCVDSGDKAL+YLGL ID + +
Sbjct: 13 QPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTK 72
Query: 99 NAS--------PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSS 150
++ P L + E ++VNLIMTDYCMPGM+GYDLLKR+K SSWKDVPVVVMSS
Sbjct: 73 SSILESSSPSLPQPLQLQ-EGNKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVVMSS 131
Query: 151 ENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDS----------- 199
ENVPSR++MCLEEGAEEFL+KP++LSDL+KLQP LKS S E +
Sbjct: 132 ENVPSRISMCLEEGAEEFLMKPLQLSDLQKLQPYFLKSLENSSDEQESANSSTTTTDSDD 191
Query: 200 DNDNKNETSNYKSSTNSAFSKRKALSAEAPERR-PKMKEVAVV 241
DND + +N +++ SKRKA+S E PER PKMK +AVV
Sbjct: 192 DNDLIDSNNNSNDDNSNSISKRKAMSPEPPERSMPKMKGLAVV 234
>gi|388511879|gb|AFK44001.1| unknown [Medicago truncatula]
Length = 235
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 131/223 (58%), Positives = 159/223 (71%), Gaps = 22/223 (9%)
Query: 40 QPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL-IDNLENNS 98
QPQ +QE FHVLAVDDS+IDR +LE LLR SS +VTCVDSGDKAL+YLGL ID + +
Sbjct: 13 QPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTK 72
Query: 99 NAS--------PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSS 150
++ P L + E ++VNLIMTDYCMPGM+GYDLLKR+K SSWKDVPVVVMSS
Sbjct: 73 SSILESSSPSLPQPLQLQ-EGNKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVVMSS 131
Query: 151 ENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDS----------- 199
ENVPSR++MCLEEGAEEFL+KP++LSDL+KLQP LKS S E +
Sbjct: 132 ENVPSRISMCLEEGAEEFLMKPLQLSDLQKLQPYFLKSLENSFDEQESANSSTTTTDSDD 191
Query: 200 DNDNKNETSNYKSSTNSAFSKRKALSAEAPERR-PKMKEVAVV 241
DND + +N +++ SKRKA+S E PER PKMK +AVV
Sbjct: 192 DNDLIDSNNNSNDDNSNSISKRKAMSPEPPERSMPKMKGLAVV 234
>gi|255646817|gb|ACU23880.1| unknown [Glycine max]
Length = 235
Score = 221 bits (562), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 158/213 (74%), Gaps = 25/213 (11%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSN-------ASPS 103
VLAVDDS+IDRK+LE LLR SS +VTCVDSGDKAL+YLGLID L++ S+ + P
Sbjct: 26 VLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTPLESESSHPP 85
Query: 104 TLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEE 163
++E +VNLIMTDYCMPGM+GYDLLKR+K SSWKDVPVV+MSSENVPSR++MCLEE
Sbjct: 86 PQPLQREGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEE 145
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDN-----------KNETSNYKS 212
GAEEFLLKP++LSDL+KLQP LKS + SC ++S N + + SN +
Sbjct: 146 GAEEFLLKPLQLSDLDKLQPYFLKSVDNSC--EKESANSSIDSDNDNVINNNSNNSNSNN 203
Query: 213 STNSAFSKRKALSAEAPER----RPKMKEVAVV 241
+ N++ SKRKA+S E P R RPKMKE+AVV
Sbjct: 204 NNNNSISKRKAMSPE-PHREERSRPKMKELAVV 235
>gi|356509391|ref|XP_003523433.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 235
Score = 217 bits (552), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 157/213 (73%), Gaps = 25/213 (11%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA-------SPS 103
VLAVDDS+IDRK+LE LLR SS +VTCVDSGDKAL+YLGLID L++ S+ P
Sbjct: 26 VLAVDDSVIDRKLLERLLRGSSCKVTCVDSGDKALKYLGLIDELDDTSSTSLESESSHPP 85
Query: 104 TLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEE 163
++E +VNLIMTDYCMPGM+GYDLLKR+K SSWKDVPVV+MSSENVPSR++MCLEE
Sbjct: 86 PQPLQREGIKVNLIMTDYCMPGMSGYDLLKRVKGSSWKDVPVVIMSSENVPSRISMCLEE 145
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDN-----------KNETSNYKS 212
GAEEFLLKP++LSDL+KLQP LKS + SC ++S N + + SN +
Sbjct: 146 GAEEFLLKPLQLSDLDKLQPYFLKSVDNSC--EKESANSSIDSDNDNVINNNSNNSNSNN 203
Query: 213 STNSAFSKRKALSAEAPER----RPKMKEVAVV 241
+ N++ SKRKA+S E P R RPKMKE+AVV
Sbjct: 204 NNNNSISKRKAMSPE-PHREERSRPKMKELAVV 235
>gi|255545370|ref|XP_002513745.1| Two-component response regulator ARR9, putative [Ricinus communis]
gi|223546831|gb|EEF48328.1| Two-component response regulator ARR9, putative [Ricinus communis]
Length = 229
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 146/207 (70%), Gaps = 31/207 (14%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA-------- 100
FHVLAVDDSL+DRK+LE LLRVSSYQVTCVDSGDKALEYLGL++NLEN + A
Sbjct: 40 FHVLAVDDSLLDRKLLERLLRVSSYQVTCVDSGDKALEYLGLLNNLENATTASSSSSSFS 99
Query: 101 ------SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVP 154
P ++E +VNLIMTDYCMPGM+GYDLLKR+K S WKDVPVVV
Sbjct: 100 QSAPPPPPPQQQQQQEGMKVNLIMTDYCMPGMSGYDLLKRVKGSPWKDVPVVV------- 152
Query: 155 SRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSST 214
MCLE GAEEFLLKPV+LSD+EKLQ LLKS + SC + N +SN ++
Sbjct: 153 ----MCLEGGAEEFLLKPVQLSDVEKLQTHLLKSLDHSCKEV------DNNGSSNSNKNS 202
Query: 215 NSAFSKRKALSAEAPERRPKMKEVAVV 241
+++ SKRKA+S E PERRPKMK +AVV
Sbjct: 203 SNSISKRKAMSPEPPERRPKMKGLAVV 229
>gi|388497694|gb|AFK36913.1| unknown [Medicago truncatula]
Length = 239
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 94/141 (66%), Positives = 115/141 (81%), Gaps = 2/141 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK++E LL+ SSYQVT VDSG KALE+LGL +N E N N +PS
Sbjct: 9 FHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLCENDETNPN-TPSVFPNN 67
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNL++TDYCMPGMTGYDLLK++K SS +++PVV+MSSENVPSR+ CLEEGAEE
Sbjct: 68 HQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEE 127
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPVRLSDL +L+P + K+
Sbjct: 128 FFLKPVRLSDLNRLKPHMKKT 148
>gi|449464160|ref|XP_004149797.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 236
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 150/210 (71%), Gaps = 23/210 (10%)
Query: 52 LAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS--TKK 109
LAVDDSLIDRK+LE LL +SS QVTCV+SGDKAL YLGL+D+ + ++S + S ++
Sbjct: 23 LAVDDSLIDRKLLEKLLTISSCQVTCVESGDKALRYLGLLDHDLDPFSSSSFSSSQLSQH 82
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+E +VNLIMTD+CMPGM+GYDLLKRLK S WKD+PVVVMSSEN PSR+ MCLEEGAEEFL
Sbjct: 83 QEVKVNLIMTDFCMPGMSGYDLLKRLKGSYWKDIPVVVMSSENEPSRINMCLEEGAEEFL 142
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNE----------------DSDNDNKNE---TSNY 210
LKP++LSD++KL+P L KS R + + D +N++K E S
Sbjct: 143 LKPLQLSDVKKLEPHLQKSLTRCASDQQIKEQQTTLGIGIGIEIDDENNSKLEESKNSIN 202
Query: 211 KSSTNSAFSKRKALSAEAPER--RPKMKEV 238
++ N++ SKRKA +AE E RPK+KE+
Sbjct: 203 NNNNNNSMSKRKAATAEHCEERSRPKLKEL 232
>gi|359807137|ref|NP_001241095.1| uncharacterized protein LOC100814494 [Glycine max]
gi|255647755|gb|ACU24338.1| unknown [Glycine max]
Length = 244
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/141 (66%), Positives = 115/141 (81%), Gaps = 2/141 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDRK++E LLR SSY+VT VDSG KALE+LGL +N E+N ++P
Sbjct: 7 FHVLAVDDSLIDRKLIERLLRTSSYEVTTVDSGSKALEFLGLCENDESNP-STPYVCPNN 65
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNL++TDYCMPGMTGYDLLK++K SS +++PVV+MSSENVPSR+ CLEEGAEE
Sbjct: 66 HQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEE 125
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPVRLSDL KL+P + K+
Sbjct: 126 FFLKPVRLSDLNKLKPHMKKT 146
>gi|370988687|dbj|BAL43557.1| type-A response regulator [Petunia x hybrida]
Length = 227
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 93/141 (65%), Positives = 115/141 (81%), Gaps = 2/141 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDRK++E LL+ SS QVT VDSG KALE+LGL ++ +N SN P
Sbjct: 10 FHVLAVDDSLIDRKLIERLLKTSSCQVTTVDSGSKALEFLGLQEHEQNKSN-QPCVSLDN 68
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E+ +NLI+TDYCMPGMTGYDLLK++K SS +++PVV+MSSENVPSR+ CLEEGAEE
Sbjct: 69 HQEAEINLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEE 128
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPVRLSD+ KL+P ++KS
Sbjct: 129 FFLKPVRLSDVNKLRPHMMKS 149
>gi|255583668|ref|XP_002532588.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223527676|gb|EEF29785.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 221
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 119/144 (82%), Gaps = 2/144 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDRK++E LL++SSYQVT VDSG KAL++LGL ++ + +S PS
Sbjct: 9 FHVLAVDDSLIDRKLIEKLLKISSYQVTTVDSGSKALQFLGLHED-DRSSPEIPSVSPNS 67
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDYCMPGMTGYDLLK++K SS K++PVV+MSSENVP+R+T CLEEGAEE
Sbjct: 68 HQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLKNIPVVIMSSENVPARITRCLEEGAEE 127
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNR 191
F LKPV+LSDL +L+P ++K+ ++
Sbjct: 128 FFLKPVQLSDLNRLRPHMMKTKSK 151
>gi|224086847|ref|XP_002307983.1| type-a response regulator [Populus trichocarpa]
gi|222853959|gb|EEE91506.1| type-a response regulator [Populus trichocarpa]
Length = 233
Score = 193 bits (490), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 115/142 (80%), Gaps = 2/142 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID-NLENNSNASPSTLST 107
FHVLAVDDS+IDRK++E LL+ SSYQVT VDSG KAL++LGL + + +N + PS
Sbjct: 11 FHVLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDHSNPDTVPSVSPN 70
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
E VNLI+TDYCMPGMTGYDLLK++K SS +D+PVV+MSSENVPSR+T CLEEGAE
Sbjct: 71 DHREVEVNLIITDYCMPGMTGYDLLKKVKESSSLRDIPVVIMSSENVPSRITRCLEEGAE 130
Query: 167 EFLLKPVRLSDLEKLQPRLLKS 188
EF LKPVRL+DL +L+P ++K+
Sbjct: 131 EFFLKPVRLADLNRLKPHMMKT 152
>gi|309951236|emb|CBX43988.1| putative A-type response regulator 6 [Populus x canadensis]
Length = 230
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 92/142 (64%), Positives = 116/142 (81%), Gaps = 2/142 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID-NLENNSNASPSTLST 107
FHVLAVDDS+IDRK++E LL+ SSYQVT VDSG KAL++LGL + + ++N + PS
Sbjct: 11 FHVLAVDDSMIDRKLIERLLKTSSYQVTAVDSGSKALKFLGLHEEDDQSNPDTVPSVCPN 70
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
E VNLI+TDYCMPGMTGYDLLK++K SS +D+PVV+MSSENVPSR+T CLEEGAE
Sbjct: 71 DHREVEVNLIITDYCMPGMTGYDLLKKVKESSSLRDIPVVIMSSENVPSRITRCLEEGAE 130
Query: 167 EFLLKPVRLSDLEKLQPRLLKS 188
EF LKPVRL+DL +L+P ++K+
Sbjct: 131 EFFLKPVRLADLNRLKPHMMKT 152
>gi|346703189|emb|CBX25288.1| hypothetical_protein [Oryza brachyantha]
Length = 200
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 115/141 (81%), Gaps = 6/141 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL DRK++E LL+ SS+QVT VDSG KALE+LGL + SP ++
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGL-----HGHEDSPISVQAD 63
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAEE 167
++E+ VNLI+TDYCMPGMTGYDLLK++K SS+ +D+PVV+MSSEN+PSR+ CLEEGA+E
Sbjct: 64 QQEAAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSENIPSRINRCLEEGADE 123
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPVRLSD+ KL+P +LKS
Sbjct: 124 FFLKPVRLSDMSKLKPHILKS 144
>gi|358248966|ref|NP_001240226.1| uncharacterized protein LOC100788079 [Glycine max]
gi|255641691|gb|ACU21117.1| unknown [Glycine max]
Length = 248
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/143 (66%), Positives = 117/143 (81%), Gaps = 4/143 (2%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL--S 106
FHVLAVDDS+IDRK++E LLR SSYQVT VDSG KALE+LGL +N E+N + PS +
Sbjct: 10 FHVLAVDDSIIDRKLIERLLRTSSYQVTTVDSGSKALEFLGLRENDESNPSI-PSVCPNN 68
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGA 165
+ +E VNL++TDYCMPGMTGYDLLK++K SS +++PVV+MSSENVPSR+ CLEEGA
Sbjct: 69 HQPQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGA 128
Query: 166 EEFLLKPVRLSDLEKLQPRLLKS 188
EEF LKPVRLSDL KL+P + K+
Sbjct: 129 EEFFLKPVRLSDLNKLKPHMKKT 151
>gi|309951232|emb|CBX43986.1| putative A-type response regulator 4 [Populus x canadensis]
Length = 193
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/148 (62%), Positives = 116/148 (78%), Gaps = 2/148 (1%)
Query: 43 QQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI-DNLENNSNAS 101
Q + FHVLAVDDSLIDRK++E LL+ SSYQVT VDSG KALE+LGL D+ + +SN S
Sbjct: 7 QATETQFHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLHGDDEQRDSNPS 66
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMC 160
+ + +N+I+TDYCMPGMTGYDLLK++K S + KD+PVV+MSSENVPSR+ C
Sbjct: 67 SVSPDHHHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRC 126
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
LEEGAEEF LKPV+LSD+ KL+P L+K
Sbjct: 127 LEEGAEEFFLKPVQLSDVNKLRPHLMKG 154
>gi|225441254|ref|XP_002273990.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 218
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/141 (65%), Positives = 117/141 (82%), Gaps = 5/141 (3%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDRK++E LL+ SSYQVT VDSG KALE+LGL +N N + SP++
Sbjct: 9 FHVLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSVSPNS---- 64
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDYCMPGMTGYDLLK++K SS +++PVV+MSSENVPSR+T CLEEGAEE
Sbjct: 65 HQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEE 124
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPV++SD+ +L+P ++K+
Sbjct: 125 FFLKPVQISDVNRLKPHMMKA 145
>gi|224137712|ref|XP_002322625.1| type-a response regulator [Populus trichocarpa]
gi|222867255|gb|EEF04386.1| type-a response regulator [Populus trichocarpa]
Length = 227
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/141 (65%), Positives = 117/141 (82%), Gaps = 2/141 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDRK++E LL+ SSYQVT VDSG KAL++LGL ++ ++N + +P
Sbjct: 11 FHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGLQEDEQSNPD-TPYVSPNN 69
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDYCMPGMTGYDLLK++K SS +++PVV+MSSENVPSR+T CLEEGAEE
Sbjct: 70 HQEMEVNLIITDYCMPGMTGYDLLKKVKESSSLRNIPVVIMSSENVPSRITRCLEEGAEE 129
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPVRLSDL +L+P ++K+
Sbjct: 130 FFLKPVRLSDLNRLKPHMMKT 150
>gi|224075846|ref|XP_002304794.1| type-a response regulator [Populus trichocarpa]
gi|224075848|ref|XP_002304795.1| hypothetical protein POPTRDRAFT_693167 [Populus trichocarpa]
gi|222842226|gb|EEE79773.1| type-a response regulator [Populus trichocarpa]
gi|222842227|gb|EEE79774.1| hypothetical protein POPTRDRAFT_693167 [Populus trichocarpa]
Length = 193
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 125/175 (71%), Gaps = 7/175 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI-DNLENNSNASPSTLST 107
FHVLAVDDSLIDRK++E LL+ SSYQVT VDSG KALE+LGL D+ + +SN S +
Sbjct: 13 FHVLAVDDSLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGLSGDDEQRDSNPSSVSPDH 72
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAE 166
+ +N+I+TDYCMPGMTGYDLLK++K S + KD+PVV+MSSENVPSR+ CLEEGAE
Sbjct: 73 HHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLEEGAE 132
Query: 167 EFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKN--ETSNYKSSTNSAFS 219
EF LKPV+LSD+ KL+P L+K C + +N K E N T S +S
Sbjct: 133 EFFLKPVQLSDVNKLRPHLMKG---RCKEEDQPNNKRKGMEEIVNSPGRTRSRYS 184
>gi|309951238|emb|CBX43989.1| putative A-type response regulator 7 [Populus x canadensis]
Length = 227
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/141 (65%), Positives = 117/141 (82%), Gaps = 2/141 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDRK++E LL+ SSYQVT VDSG KAL++LGL ++ ++N + +P
Sbjct: 11 FHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALKFLGLQEDEQSNPD-TPFVSPNN 69
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDYCMPGMTGYDLLK++K SS +++PVV+MSSENVPSR+T CLEEGAEE
Sbjct: 70 HQEVEVNLIITDYCMPGMTGYDLLKKVKESSSLRNIPVVIMSSENVPSRITRCLEEGAEE 129
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPVRLSDL +L+P ++K+
Sbjct: 130 FFLKPVRLSDLNRLKPHMMKT 150
>gi|346703374|emb|CBX25471.1| hypothetical_protein [Oryza glaberrima]
Length = 201
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 115/141 (81%), Gaps = 6/141 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL DRK++E LL+ SS+QVT VDSG KALE+LGL D+ SP + +
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDH-----EDSPISTQSD 63
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAEE 167
++E VNLI+TDYCMPGMTGYDLLK++K SS+ +D+PVV+MSS+N+PSR+ CLEEGA+E
Sbjct: 64 QQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADE 123
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPVRLSD+ KL+P +LKS
Sbjct: 124 FFLKPVRLSDMSKLKPHILKS 144
>gi|115484121|ref|NP_001065722.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|71273491|emb|CAI79413.1| Type A response regulator 9 [Oryza sativa Indica Group]
gi|87116388|dbj|BAE79353.1| typeA response regulator 9 [Oryza sativa Japonica Group]
gi|108863989|gb|ABA91415.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|113644426|dbj|BAF27567.1| Os11g0143300 [Oryza sativa Japonica Group]
gi|118790795|tpd|FAA00260.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215765046|dbj|BAG86743.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218185231|gb|EEC67658.1| hypothetical protein OsI_35072 [Oryza sativa Indica Group]
gi|222615502|gb|EEE51634.1| hypothetical protein OsJ_32929 [Oryza sativa Japonica Group]
Length = 201
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 115/141 (81%), Gaps = 6/141 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL DRK++E LL+ SS+QVT VDSG KALE+LGL D+ SP + +
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDH-----EDSPISTQSD 63
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAEE 167
++E VNLI+TDYCMPGMTGYDLLK++K SS+ +D+PVV+MSS+N+PSR+ CLEEGA+E
Sbjct: 64 QQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADE 123
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPVRLSD+ KL+P +LKS
Sbjct: 124 FFLKPVRLSDMSKLKPHILKS 144
>gi|297612639|ref|NP_001066118.2| Os12g0139400 [Oryza sativa Japonica Group]
gi|87116390|dbj|BAE79354.1| typeA response regulator 10 [Oryza sativa Japonica Group]
gi|108862172|gb|ABA96406.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
gi|118790800|tpd|FAA00261.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218186409|gb|EEC68836.1| hypothetical protein OsI_37415 [Oryza sativa Indica Group]
gi|222616614|gb|EEE52746.1| hypothetical protein OsJ_35177 [Oryza sativa Japonica Group]
gi|255670034|dbj|BAF29137.2| Os12g0139400 [Oryza sativa Japonica Group]
Length = 201
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 115/141 (81%), Gaps = 6/141 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL DRK++E LL+ SS+QVT VDSG KALE+LGL D+ SP + +
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALEFLGLHDH-----EDSPISTQSD 63
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAEE 167
++E VNLI+TDYCMPGMTGYDLLK++K SS+ +D+PVV+MSS+N+PSR+ CLEEGA+E
Sbjct: 64 QQEVGVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRCLEEGADE 123
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPVRLSD+ KL+P +LKS
Sbjct: 124 FFLKPVRLSDMSKLKPHILKS 144
>gi|356549441|ref|XP_003543102.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 211
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 146/204 (71%), Gaps = 10/204 (4%)
Query: 38 EKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENN 97
+K Q +QQ+ FHVL VDDS+IDRK+LE LLR SS + T VDSGDKAL++LGL+D+ +N
Sbjct: 7 QKLKQHEQQQHFHVLVVDDSVIDRKLLERLLRDSSCKATFVDSGDKALKFLGLLDDDLDN 66
Query: 98 SNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRV 157
S+++ S S + +VN+IMTDYCMPGM+GYDLLKR+K SSWKDVPVV+MSSENVPSR+
Sbjct: 67 SSSTSSE-SLQLNGIKVNMIMTDYCMPGMSGYDLLKRIKGSSWKDVPVVIMSSENVPSRI 125
Query: 158 TMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSA 217
+MCLE GAE+FLLKP++ SDLEKLQP LKS + S S+ D E S ++
Sbjct: 126 SMCLEGGAEKFLLKPLQQSDLEKLQPCFLKSSDNS------SEQDQSAERSVASHDNDNY 179
Query: 218 FSKRKALSAEAPERRPKMKEVAVV 241
KAL PE K++ V+ +
Sbjct: 180 IDTIKAL---CPEHGFKLQFVSTI 200
>gi|388495492|gb|AFK35812.1| unknown [Lotus japonicus]
Length = 239
Score = 189 bits (480), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 119/153 (77%), Gaps = 2/153 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+HVLAVDDS+IDRK++E LL+ SSYQVT VDSG KALE+LGL +N E+N N +PS
Sbjct: 10 YHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPN-TPSISPNN 68
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNL++TDYCMPGMTGYDLLK++K SS +++PVV+MSSENVPSR+ CLEEGAEE
Sbjct: 69 HQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRINRCLEEGAEE 128
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD 200
F LKPVR SDL +L+ + K+ + N + +D
Sbjct: 129 FFLKPVRQSDLVRLKSHIKKTNLKKIQNQDVAD 161
>gi|242084508|ref|XP_002442679.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
gi|241943372|gb|EES16517.1| hypothetical protein SORBIDRAFT_08g001140 [Sorghum bicolor]
Length = 236
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 97/164 (59%), Positives = 121/164 (73%), Gaps = 9/164 (5%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL DRK++E LL+ SS+QVT VDSG KAL++LGL D+ SP + T
Sbjct: 45 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDD------HSPVPVHTD 98
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ + VNLI+TDYCMPGMTGYDLLK++K SS +D+PVV+MSSEN+PSR+ CLEEGA+E
Sbjct: 99 QLDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEEGADE 158
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGNNE--DSDNDNKNETSN 209
F LKPVRLSD+ KL+P +LKS R + E + N E SN
Sbjct: 159 FFLKPVRLSDMNKLKPHILKSRCREHNHQEQLQQSDSNSEECSN 202
>gi|297739924|emb|CBI30106.3| unnamed protein product [Vitis vinifera]
Length = 157
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/139 (65%), Positives = 115/139 (82%), Gaps = 5/139 (3%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDRK++E LL+ SSYQVT VDSG KALE+LGL +N N + SP++
Sbjct: 9 FHVLAVDDSLIDRKLIEKLLKNSSYQVTTVDSGSKALEFLGLHENDPNTPSVSPNS---- 64
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDYCMPGMTGYDLLK++K SS +++PVV+MSSENVPSR+T CLEEGAEE
Sbjct: 65 HQEVEVNLIITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRITRCLEEGAEE 124
Query: 168 FLLKPVRLSDLEKLQPRLL 186
F LKPV++SD+ +L+P ++
Sbjct: 125 FFLKPVQISDVNRLKPHMM 143
>gi|388512609|gb|AFK44366.1| unknown [Lotus japonicus]
Length = 239
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 93/153 (60%), Positives = 118/153 (77%), Gaps = 2/153 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+HVLAVDDS+IDRK++E LL+ SSYQVT VDSG KALE+LGL +N E+N N +PS
Sbjct: 10 YHVLAVDDSIIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLHENEESNPN-TPSISPNN 68
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNL++TDYCMPGMTGYDLLK++K SS +++PVV MSSENVPSR+ CLEEGAEE
Sbjct: 69 HQEVEVNLVITDYCMPGMTGYDLLKKIKESSSLRNIPVVTMSSENVPSRINRCLEEGAEE 128
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD 200
F LKPVR SDL +L+ + K+ + N + +D
Sbjct: 129 FFLKPVRQSDLVRLKSHIKKTNLKKIQNQDVAD 161
>gi|225465885|ref|XP_002267404.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 220
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/144 (65%), Positives = 114/144 (79%), Gaps = 4/144 (2%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK++E LL+ SSYQVT VDSG KALE+LGL + N SP +L
Sbjct: 9 FHVLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGLQE--AEQRNLSPPSL-CP 65
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDYCMPGMTGYDLL+++K S S KD+PVV+MSSEN+PSR+ CLEEGAE+
Sbjct: 66 SQEMEVNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAED 125
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNR 191
F LKPV+LSD+ KL+P LLK R
Sbjct: 126 FFLKPVQLSDVNKLRPHLLKGKAR 149
>gi|326518312|dbj|BAJ88185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 287
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 128/170 (75%), Gaps = 12/170 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS++DRK++E LL+ SS+QVT VDSG KAL++LGL + +AS S++
Sbjct: 54 FHVLAVDDSVLDRKLIERLLKTSSFQVTTVDSGTKALQFLGL-----HAEDASISSVHAD 108
Query: 109 K--EESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGA 165
+ E VNLI+TDYCMPGMTGYDLLK++K SS++D+PVV+MSSEN+PSR+ CLEEGA
Sbjct: 109 QLDVEVNVNLIITDYCMPGMTGYDLLKKIKESSSFRDIPVVIMSSENIPSRINRCLEEGA 168
Query: 166 EEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD---NDNKNETSNYKS 212
EF LKPVRLSD+ KL+P ++KS + ++ED D N + N T+N S
Sbjct: 169 NEFFLKPVRLSDMSKLKPHIMKSRCKE-HSHEDQDLLSNSDTNPTNNSSS 217
>gi|109631202|gb|ABG35777.1| SRR217 [Striga asiatica]
Length = 220
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 92/141 (65%), Positives = 116/141 (82%), Gaps = 3/141 (2%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDRK++E LL+ SSYQVT VDSG+KALE+LG + NSNA S + +
Sbjct: 10 FHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGNKALEFLGWSKDESGNSNAFDSPKNHQ 69
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAEE 167
E VNL++TDYCMPGMTGY+LLK++K S++ +D+PVV+MSSENVPSR+ CLEEGAEE
Sbjct: 70 VVE--VNLVITDYCMPGMTGYELLKKVKESTFLRDIPVVIMSSENVPSRINRCLEEGAEE 127
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPVRLSD+ KL+P ++K+
Sbjct: 128 FFLKPVRLSDVNKLRPHMMKA 148
>gi|15230202|ref|NP_191263.1| two-component response regulator ARR9 [Arabidopsis thaliana]
gi|51315815|sp|O80366.1|ARR9_ARATH RecName: Full=Two-component response regulator ARR9; AltName:
Full=Response reactor 4
gi|3273202|dbj|BAA31146.1| responce reactor4 [Arabidopsis thaliana]
gi|6911874|emb|CAB72174.1| responce reactor 4 [Arabidopsis thaliana]
gi|19699061|gb|AAL90898.1| AT3g57040/F24I3_120 [Arabidopsis thaliana]
gi|22137112|gb|AAM91401.1| At3g57040/F24I3_120 [Arabidopsis thaliana]
gi|332646081|gb|AEE79602.1| two-component response regulator ARR9 [Arabidopsis thaliana]
Length = 234
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/141 (63%), Positives = 113/141 (80%), Gaps = 1/141 (0%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL DRK++E LL+ SS QVT VDSG KALE+LGL + ++N + S
Sbjct: 9 FHVLAVDDSLFDRKLIERLLQKSSCQVTTVDSGSKALEFLGLRQSTDSNDPNAFSKAPVN 68
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ VNLI+TDYCMPGMTGYDLLK++K SS ++D+PVV+MSSENVP+R++ CLEEGAEE
Sbjct: 69 HQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEE 128
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPVRL+DL KL+P ++K+
Sbjct: 129 FFLKPVRLADLNKLKPHMMKT 149
>gi|224033189|gb|ACN35670.1| unknown [Zea mays]
gi|413915889|gb|AFW55821.1| response regulator 6 [Zea mays]
Length = 262
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 130/193 (67%), Gaps = 12/193 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS-- 106
FHVLAVDDSL DRK++E LL+ SS+QVT VDSG KAL++LGL D +S P
Sbjct: 69 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQ---DSTVPPVHTHQL 125
Query: 107 --TKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEE 163
++ VNLI+TDYCMPGMTGYDLLK++K SS +D+PVV+MSSEN+PSR+ CLEE
Sbjct: 126 DVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEE 185
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDND-NKNETSNYKSSTNSAFSKRK 222
GA+EF LKPVRLSD+ KL+P +LKS C + +D + E N S++ + + RK
Sbjct: 186 GADEFFLKPVRLSDMNKLKPHILKS---RCNQEQHQQSDSHSGERRNPTISSSDSINNRK 242
Query: 223 ALSAEAPERRPKM 235
A E P++
Sbjct: 243 RKGAGTEEILPQL 255
>gi|296090338|emb|CBI40157.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 93/141 (65%), Positives = 113/141 (80%), Gaps = 4/141 (2%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK++E LL+ SSYQVT VDSG KALE+LGL + N SP +L
Sbjct: 9 FHVLAVDDSIIDRKLIEKLLKTSSYQVTAVDSGSKALEFLGLQE--AEQRNLSPPSL-CP 65
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDYCMPGMTGYDLL+++K S S KD+PVV+MSSEN+PSR+ CLEEGAE+
Sbjct: 66 SQEMEVNLIITDYCMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAED 125
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPV+LSD+ KL+P LLK
Sbjct: 126 FFLKPVQLSDVNKLRPHLLKG 146
>gi|297817018|ref|XP_002876392.1| hypothetical protein ARALYDRAFT_486148 [Arabidopsis lyrata subsp.
lyrata]
gi|297322230|gb|EFH52651.1| hypothetical protein ARALYDRAFT_486148 [Arabidopsis lyrata subsp.
lyrata]
Length = 232
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/141 (63%), Positives = 112/141 (79%), Gaps = 1/141 (0%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL DRK +E LL+ SS QVT VDSG KALE+LGL +++N + S
Sbjct: 7 FHVLAVDDSLFDRKYIERLLQKSSCQVTTVDSGSKALEFLGLRQGIDSNDPNALSKSPVT 66
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ VNLI+TDYCMPGMTGYDLLK++K SS ++D+PVV+MSSENVP+R++ CLEEGAEE
Sbjct: 67 HQVVEVNLIITDYCMPGMTGYDLLKKVKESSAFRDIPVVIMSSENVPARISRCLEEGAEE 126
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPVRL+DL KL+P ++K+
Sbjct: 127 FFLKPVRLADLNKLKPHMMKT 147
>gi|194694438|gb|ACF81303.1| unknown [Zea mays]
Length = 235
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 130/193 (67%), Gaps = 12/193 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS-- 106
FHVLAVDDSL DRK++E LL+ SS+QVT VDSG KAL++LGL D +S P
Sbjct: 42 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQ---DSTVPPVHTHQL 98
Query: 107 --TKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEE 163
++ VNLI+TDYCMPGMTGYDLLK++K SS +D+PVV+MSSEN+PSR+ CLEE
Sbjct: 99 DVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEE 158
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDND-NKNETSNYKSSTNSAFSKRK 222
GA+EF LKPVRLSD+ KL+P +LKS C + +D + E N S++ + + RK
Sbjct: 159 GADEFFLKPVRLSDMNKLKPHILKS---RCNQEQHQQSDSHSGERRNPTISSSDSINNRK 215
Query: 223 ALSAEAPERRPKM 235
A E P++
Sbjct: 216 RKGAGTEEILPQL 228
>gi|162459272|ref|NP_001104857.1| LOC541632 [Zea mays]
gi|12060388|dbj|BAB20581.1| response regulator 6 [Zea mays]
Length = 235
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 130/193 (67%), Gaps = 12/193 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS-- 106
FHVLAVDDSL DRK++E LL+ SS+QVT VDSG KAL++LGL D +S P
Sbjct: 42 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQ---DSTVPPVHTHQL 98
Query: 107 --TKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEE 163
++ VNLI+TDYCMPGMTGYDLLK++K SS +D+PVV+MSSEN+PSR+ CLEE
Sbjct: 99 DVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEE 158
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDND-NKNETSNYKSSTNSAFSKRK 222
GA+EF LKPVRLSD+ KL+P +LKS C + +D + E N S++ + + RK
Sbjct: 159 GADEFFLKPVRLSDMNKLKPHILKS---RCNQEQHQQSDSHSGERRNPTISSSDSINNRK 215
Query: 223 ALSAEAPERRPKM 235
A E P++
Sbjct: 216 RKGAGTEEILPQL 228
>gi|242055597|ref|XP_002456944.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
gi|241928919|gb|EES02064.1| hypothetical protein SORBIDRAFT_03g046040 [Sorghum bicolor]
Length = 245
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/140 (65%), Positives = 116/140 (82%), Gaps = 2/140 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS++DRK++E LL+ SSYQVT VDSG KALE LGL DN ++++ S+ S
Sbjct: 10 FHVLAVDDSIVDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDNGAEDASSP-SSSSPD 68
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDYCMPGMTGYDLLKR+K SS KD+PVV+MSSENVP+R++ CLE+GAEE
Sbjct: 69 HQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEE 128
Query: 168 FLLKPVRLSDLEKLQPRLLK 187
F LKPV+L+D++KL+ LLK
Sbjct: 129 FFLKPVKLADMKKLKSHLLK 148
>gi|357160996|ref|XP_003578944.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 225
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/155 (59%), Positives = 116/155 (74%), Gaps = 9/155 (5%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL DRK++E LL+ SS+QVT VDSG KALE+LG+ + +P +L
Sbjct: 10 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGTKALEFLGI------HGQDTPISLHAD 63
Query: 109 K--EESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGA 165
E VNLI+TDYCMPGMTGYDLLK++K SS +D+PVV+MSSENVPSR+ CLEEGA
Sbjct: 64 HLDVEVNVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENVPSRINRCLEEGA 123
Query: 166 EEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD 200
EF LKPVRLSD+ KL+P ++KS + ++E+ D
Sbjct: 124 NEFFLKPVRLSDMSKLKPHIMKSRCKEHCHHEEED 158
>gi|195622036|gb|ACG32848.1| RR10 - Corn type-A response regulator [Zea mays]
Length = 204
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 131/194 (67%), Gaps = 13/194 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS-- 106
FHVLAVDDSL DRK++E LL+ SS+QVT VDSG KAL++LGL D +S P
Sbjct: 10 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHDQ---DSTVPPVHTHQL 66
Query: 107 --TKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEE 163
++ VNLI+TDYCMPGMTGYDLLK++K SS +D+PVV+MSSEN+PSR+ CLEE
Sbjct: 67 DVAANQDVAVNLIITDYCMPGMTGYDLLKKIKESSSLRDIPVVIMSSENIPSRINRCLEE 126
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKSPNRSCG--NNEDSDNDNKNETSNYKSSTNSAFSKR 221
GA+EF LKPVRLSD+ KL+P +LKS C ++ SD+ + + S++ + + R
Sbjct: 127 GADEFFLKPVRLSDMNKLKPHILKS---RCNQEQHQQSDSHSGERRNPTIGSSSDSINNR 183
Query: 222 KALSAEAPERRPKM 235
K A E P++
Sbjct: 184 KRKGAGTEEILPQL 197
>gi|226532164|ref|NP_001149868.1| RR4 - Corn type-A response regulator [Zea mays]
gi|195635163|gb|ACG37050.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 236
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 111/140 (79%), Gaps = 7/140 (5%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL+DRK++E LL+ SSYQVT VDSG KALE LGL D + + S
Sbjct: 10 FHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPS------SPD 63
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDYCMPGMTGYDLLKR+K SS KD+PVV+MSSENVP+R++ CL++GAEE
Sbjct: 64 HQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEE 123
Query: 168 FLLKPVRLSDLEKLQPRLLK 187
F LKPV+L+D++KL+ LLK
Sbjct: 124 FFLKPVKLADMKKLKSHLLK 143
>gi|346703278|emb|CBX25376.1| hypothetical_protein [Oryza brachyantha]
Length = 215
Score = 183 bits (464), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/148 (61%), Positives = 114/148 (77%), Gaps = 13/148 (8%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQ-------VTCVDSGDKALEYLGLIDNLENNSNAS 101
FHVLAVDDSL DRK++E LL+ SS+Q VT VDSG KALE+LGL + S
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQGFGFVGVVTTVDSGSKALEFLGL-----HAHEDS 63
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMC 160
P ++ ++E+ VNLI+TDYCMPGMTGYDLLK++K SS +D+PVV+MSSEN+PSR+ C
Sbjct: 64 PISVQADQQEAAVNLIITDYCMPGMTGYDLLKKIKESSCLRDIPVVIMSSENIPSRINRC 123
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
LEEGA+EF LKPVRLSD+ KL+P +LKS
Sbjct: 124 LEEGADEFFLKPVRLSDMSKLKPHILKS 151
>gi|162459124|ref|NP_001104856.1| response regulator 5 [Zea mays]
gi|12060386|dbj|BAB20580.1| response regulator 5 [Zea mays]
Length = 236
Score = 183 bits (464), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 111/140 (79%), Gaps = 7/140 (5%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL+DRK++E LL+ SSYQVT VDSG KALE LGL D + + S
Sbjct: 10 FHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPS------SPD 63
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDYCMPGMTGYDLLKR+K SS KD+PVV+MSSENVP+R++ CL++GAEE
Sbjct: 64 HQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEE 123
Query: 168 FLLKPVRLSDLEKLQPRLLK 187
F LKPV+L+D++KL+ LLK
Sbjct: 124 FFLKPVKLADMKKLKSHLLK 143
>gi|224053258|ref|XP_002297741.1| type-a response regulator [Populus trichocarpa]
gi|222844999|gb|EEE82546.1| type-a response regulator [Populus trichocarpa]
Length = 203
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 115/144 (79%), Gaps = 6/144 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENN-SNASPSTLST 107
FHVLAVDD LIDRK++E LL+ SSYQVT VDSG KALE+LGL N EN ++ P+++S
Sbjct: 17 FHVLAVDDCLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGL--NGENELRDSKPASVSP 74
Query: 108 K--KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEG 164
+ +N+I+TDYCMPGMTGYDLLK++K S + KD+PVV+MSSENVPSR+ CL+EG
Sbjct: 75 DPYHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLKEG 134
Query: 165 AEEFLLKPVRLSDLEKLQPRLLKS 188
AEEF LKPV+LSD+ KL+P L+K
Sbjct: 135 AEEFFLKPVQLSDVNKLRPHLMKG 158
>gi|108863990|gb|ABA91414.2| Two-component response regulator ARR8, putative, expressed [Oryza
sativa Japonica Group]
Length = 208
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 91/148 (61%), Positives = 115/148 (77%), Gaps = 13/148 (8%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQ-------VTCVDSGDKALEYLGLIDNLENNSNAS 101
FHVLAVDDSL DRK++E LL+ SS+Q VT VDSG KALE+LGL D+ S
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQGLAFVCVVTTVDSGSKALEFLGLHDH-----EDS 63
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMC 160
P + + ++E VNLI+TDYCMPGMTGYDLLK++K SS+ +D+PVV+MSS+N+PSR+ C
Sbjct: 64 PISTQSDQQEVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRC 123
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
LEEGA+EF LKPVRLSD+ KL+P +LKS
Sbjct: 124 LEEGADEFFLKPVRLSDMSKLKPHILKS 151
>gi|309951234|emb|CBX43987.1| putative A-type response regulator 5 [Populus x canadensis]
Length = 198
Score = 182 bits (463), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 91/144 (63%), Positives = 115/144 (79%), Gaps = 6/144 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENN-SNASPSTLST 107
FHVLAVDD LIDRK++E LL+ SSYQVT VDSG KALE+LGL N EN ++ P+++S
Sbjct: 17 FHVLAVDDCLIDRKLIERLLKTSSYQVTAVDSGSKALEFLGL--NGENELRDSEPASVSP 74
Query: 108 K--KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEG 164
+ +N+I+TDYCMPGMTGYDLLK++K S + KD+PVV+MSSENVPSR+ CL+EG
Sbjct: 75 DPYHQHIEINMIITDYCMPGMTGYDLLKKIKESKYFKDIPVVIMSSENVPSRINRCLKEG 134
Query: 165 AEEFLLKPVRLSDLEKLQPRLLKS 188
AEEF LKPV+LSD+ KL+P L+K
Sbjct: 135 AEEFFLKPVQLSDVNKLRPHLMKG 158
>gi|255544001|ref|XP_002513063.1| Two-component response regulator ARR8, putative [Ricinus communis]
gi|223548074|gb|EEF49566.1| Two-component response regulator ARR8, putative [Ricinus communis]
Length = 197
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 116/153 (75%), Gaps = 10/153 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL------IDNLENNSNASP 102
FHVLAVDDSLIDRK++E LL+ SS+ VT VDSG KALE+LGL + E ++SP
Sbjct: 9 FHVLAVDDSLIDRKLIERLLKTSSFHVTAVDSGSKALEFLGLNEEEEEEEEEEERRDSSP 68
Query: 103 STLSTKKEESR---VNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVT 158
++ E + VNLI+TDYCMPGMTGYDLL+++K S S+KD+PVV+MSSENVPSR+
Sbjct: 69 ISVCPDDEHHQDLQVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRIN 128
Query: 159 MCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNR 191
CLEEGAEEF LKPV+LSD+ KL+P ++K R
Sbjct: 129 RCLEEGAEEFFLKPVQLSDVNKLKPHMMKGKTR 161
>gi|212274883|ref|NP_001130159.1| uncharacterized protein LOC100191253 [Zea mays]
gi|194688426|gb|ACF78297.1| unknown [Zea mays]
gi|194695472|gb|ACF81820.1| unknown [Zea mays]
gi|223975127|gb|ACN31751.1| unknown [Zea mays]
Length = 242
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/140 (64%), Positives = 111/140 (79%), Gaps = 7/140 (5%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL+DRK++E LL+ SSYQVT VDSG KALE LGL D + + S
Sbjct: 10 FHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPS------SPD 63
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDYCMPGMTGYDLLKR+K SS KD+PVV+MSSENVP+R++ CL++GAEE
Sbjct: 64 HQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEE 123
Query: 168 FLLKPVRLSDLEKLQPRLLK 187
F LKPV+L+D++KL+ LLK
Sbjct: 124 FFLKPVKLADMKKLKSHLLK 143
>gi|225465891|ref|XP_002267932.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 146
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 111/141 (78%), Gaps = 10/141 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDRK++E LL+ SS+QVT VDSG KALE+LGL + E N P
Sbjct: 9 FHVLAVDDSLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGLQE--EEQRNHHP------ 60
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E+ VNLI+TDY MPGMTGYDLL+++K SS KD+PVV+MSSEN+PSR+ CLEEGAE+
Sbjct: 61 -QETEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAED 119
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPV+LSD+ KL+P LL S
Sbjct: 120 FFLKPVQLSDVNKLRPHLLGS 140
>gi|449437731|ref|XP_004136644.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 226
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/146 (63%), Positives = 118/146 (80%), Gaps = 6/146 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLE-----NNSNASPS 103
FHVLAVDDSLIDRK++E LL+ SSYQVT VDSG KALE+LGLI + ++SN+S S
Sbjct: 9 FHVLAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLGLIQEHQPTNFKSSSNSSFS 68
Query: 104 TLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLE 162
+ + +E VNLI+TDYCMPGMTG+DLLK++K S S +++PVV+MSSENVPSR+ CLE
Sbjct: 69 SPNNHHQEVEVNLIITDYCMPGMTGFDLLKKVKESTSLRNIPVVIMSSENVPSRINRCLE 128
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLKS 188
EGAEEF LKPVRL D+ KL+P ++K+
Sbjct: 129 EGAEEFFLKPVRLCDVNKLKPHMMKT 154
>gi|109631208|gb|ABG35780.1| SRR198 [Striga asiatica]
Length = 238
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/142 (62%), Positives = 117/142 (82%), Gaps = 4/142 (2%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDRK++E LL+ SS+QVT VDSG KALE+LG + + SN+ +++S K
Sbjct: 10 FHVLAVDDSLIDRKLIEKLLKNSSFQVTTVDSGSKALEFLGW--HRDERSNSKGTSVSPK 67
Query: 109 -KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+E VNL++TDYCMPGMTGYDLLK++K SS K++PVV++SSENVPSR+T CLEEGAE
Sbjct: 68 THQEVEVNLVITDYCMPGMTGYDLLKKMKESSSLKNIPVVIVSSENVPSRITRCLEEGAE 127
Query: 167 EFLLKPVRLSDLEKLQPRLLKS 188
EF LKP++L+D+ KL P +L++
Sbjct: 128 EFFLKPMKLTDVNKLWPYMLRT 149
>gi|297824073|ref|XP_002879919.1| hypothetical protein ARALYDRAFT_483202 [Arabidopsis lyrata subsp.
lyrata]
gi|297325758|gb|EFH56178.1| hypothetical protein ARALYDRAFT_483202 [Arabidopsis lyrata subsp.
lyrata]
Length = 219
Score = 181 bits (459), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/142 (64%), Positives = 115/142 (80%), Gaps = 5/142 (3%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL-IDNLENNSNASPSTLST 107
FHVLAVDDSL DRK++E LL+ SS QVT VDSG KALE+LGL +D+ NN NA ST
Sbjct: 9 FHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGLRVDD--NNPNAL-STSPQ 65
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAE 166
+E +NLI+TDYCMPGMTGYDLLK++K S+ + +PVV+MSSENVP+R++ CLEEGAE
Sbjct: 66 IHQEVEINLIITDYCMPGMTGYDLLKKVKESAALRSIPVVIMSSENVPARISRCLEEGAE 125
Query: 167 EFLLKPVRLSDLEKLQPRLLKS 188
EF LKPV+L+DL KL+P ++K+
Sbjct: 126 EFFLKPVKLADLTKLKPHMMKT 147
>gi|15227325|ref|NP_181663.1| two-component response regulator ARR8 [Arabidopsis thaliana]
gi|51315814|sp|O80365.1|ARR8_ARATH RecName: Full=Two-component response regulator ARR8; AltName:
Full=Response reactor 3
gi|3273200|dbj|BAA31145.1| responce reactor3 [Arabidopsis thaliana]
gi|3894192|gb|AAC78541.1| putative two-component response regulator 3 protein [Arabidopsis
thaliana]
gi|18491269|gb|AAL69459.1| At2g41310/F13H10.14 [Arabidopsis thaliana]
gi|110736644|dbj|BAF00286.1| putative two-component response regulator 3 protein [Arabidopsis
thaliana]
gi|330254865|gb|AEC09959.1| two-component response regulator ARR8 [Arabidopsis thaliana]
Length = 225
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 114/141 (80%), Gaps = 3/141 (2%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL DRK++E LL+ SS QVT VDSG KALE+LGL +++N + ST
Sbjct: 9 FHVLAVDDSLFDRKMIERLLQKSSCQVTTVDSGSKALEFLGL--RVDDNDPNALSTSPQI 66
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E +NLI+TDYCMPGMTGYDLLK++K S+ ++ +PVV+MSSENVP+R++ CLEEGAEE
Sbjct: 67 HQEVEINLIITDYCMPGMTGYDLLKKVKESAAFRSIPVVIMSSENVPARISRCLEEGAEE 126
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPV+L+DL KL+P ++K+
Sbjct: 127 FFLKPVKLADLTKLKPHMMKT 147
>gi|359828772|gb|AEV76988.1| type A response regulator 4, partial [Triticum aestivum]
Length = 203
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/140 (62%), Positives = 114/140 (81%), Gaps = 1/140 (0%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK++E LL+ SSYQVT VDSG KALE LG D +++S+ S+
Sbjct: 10 FHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGFRDEGDDSSSPPSSSAPDH 69
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDYCMPGMTGYDLL+R+K SS KD+PVV+MSSENVP+R++ CLE+GAEE
Sbjct: 70 HQEVGVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARISRCLEDGAEE 129
Query: 168 FLLKPVRLSDLEKLQPRLLK 187
F LKPV+L+D++KL+ L++
Sbjct: 130 FFLKPVKLADMKKLKSHLVR 149
>gi|449445057|ref|XP_004140290.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
gi|449527697|ref|XP_004170846.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 156
Score = 180 bits (457), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 88/142 (61%), Positives = 112/142 (78%), Gaps = 4/142 (2%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLE--NNSNASPSTLS 106
FHVLAVDDS IDRK++E LL+ SSY VT VDSG KALE+LGL+ + + +S +P +
Sbjct: 10 FHVLAVDDSFIDRKLIERLLKTSSYHVTAVDSGTKALEFLGLVQHHDQQTDSKIAPDQ-N 68
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGA 165
+E VNLI+TDY MPGM+GY+LL+++K S S KD+PVV+MSSENVPSR+ CLEEGA
Sbjct: 69 HHHQEVDVNLIITDYSMPGMSGYELLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGA 128
Query: 166 EEFLLKPVRLSDLEKLQPRLLK 187
EEF LKPV+LSD+ KL+P L+K
Sbjct: 129 EEFFLKPVQLSDVRKLRPHLIK 150
>gi|357515051|ref|XP_003627814.1| Two-component response regulator ARR8 [Medicago truncatula]
gi|92885116|gb|ABE87636.1| Response regulator receiver [Medicago truncatula]
gi|355521836|gb|AET02290.1| Two-component response regulator ARR8 [Medicago truncatula]
gi|388516389|gb|AFK46256.1| unknown [Medicago truncatula]
Length = 177
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/142 (61%), Positives = 112/142 (78%), Gaps = 5/142 (3%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI-DNLENNSNASPSTLST 107
FHVLAVDDS+IDR ++E LL+ SS+ VT VDS KAL++LGL+ D + S ++
Sbjct: 9 FHVLAVDDSIIDRMLIERLLKTSSFNVTTVDSASKALKFLGLVEDEMRTYDTHVASEIN- 67
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAE 166
++ VNLI+TDYCMPGMTGYDLL+++K S S+KD+PVV+MSSENVPSR+ CLEEGAE
Sbjct: 68 --QDVDVNLIITDYCMPGMTGYDLLRKIKESKSFKDIPVVIMSSENVPSRINRCLEEGAE 125
Query: 167 EFLLKPVRLSDLEKLQPRLLKS 188
EF LKPV+LSD+ KL+P LLKS
Sbjct: 126 EFFLKPVQLSDVSKLKPHLLKS 147
>gi|115442281|ref|NP_001045420.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|15528802|dbj|BAB64697.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273481|emb|CAI79408.1| Type A response regulator 4 [Oryza sativa Indica Group]
gi|87116386|dbj|BAE79352.1| typeA response regulator 4 [Oryza sativa Japonica Group]
gi|113534951|dbj|BAF07334.1| Os01g0952500 [Oryza sativa Japonica Group]
gi|118790806|tpd|FAA00262.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125529138|gb|EAY77252.1| hypothetical protein OsI_05226 [Oryza sativa Indica Group]
gi|125573340|gb|EAZ14855.1| hypothetical protein OsJ_04783 [Oryza sativa Japonica Group]
gi|215678767|dbj|BAG95204.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 232
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 96/140 (68%), Positives = 117/140 (83%), Gaps = 2/140 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDRK++E LL+ SSYQVT VDSG KALE LGL D ++S++SPS+ S
Sbjct: 10 FHVLAVDDSLIDRKLIEMLLKNSSYQVTTVDSGSKALELLGLRDE-GDDSSSSPSSSSPD 68
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDYCMPGMTGYDLLKR+K SS KD+PVV+MSSENVP+R+ CLE+GAEE
Sbjct: 69 HQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAEE 128
Query: 168 FLLKPVRLSDLEKLQPRLLK 187
F LKPV+L+D++KL+ LLK
Sbjct: 129 FFLKPVKLADMKKLKSHLLK 148
>gi|388506210|gb|AFK41171.1| unknown [Lotus japonicus]
Length = 174
Score = 180 bits (456), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/149 (59%), Positives = 114/149 (76%), Gaps = 14/149 (9%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P++ Q FHVLAVDDSLIDR ++E LL+ SS+ VT VDS KAL +LGL++++ + +
Sbjct: 6 PKETQ---FHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSASKALNFLGLVEDMASEIH- 61
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTM 159
++ VNLI+TDYCMPGMTGYDLL+++K S S KD+PVV+MSSENVPSR+
Sbjct: 62 ---------QDVDVNLIITDYCMPGMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINR 112
Query: 160 CLEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
CLEEGAEEF LKPV+LSD+ KL+P L+KS
Sbjct: 113 CLEEGAEEFFLKPVQLSDVHKLKPHLMKS 141
>gi|109631210|gb|ABG35781.1| SRR197 [Striga asiatica]
Length = 211
Score = 180 bits (456), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 89/141 (63%), Positives = 110/141 (78%), Gaps = 12/141 (8%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHV AVDDSLIDRK++E LL+ SSYQVT VDSG KALE+LG S SP
Sbjct: 10 FHVFAVDDSLIDRKLIERLLKTSSYQVTTVDSGSKALEFLG-------ESCDSPKN---- 58
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAEE 167
++E VNL++TDYCMPGMTGYDLLK++K SS+ +D+PVV++SSENVPSR+ CLEEG EE
Sbjct: 59 QQEIEVNLVITDYCMPGMTGYDLLKKMKESSFLRDIPVVILSSENVPSRINRCLEEGTEE 118
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPVRLSD+ KL+P ++K+
Sbjct: 119 FFLKPVRLSDVNKLRPHMMKA 139
>gi|225465893|ref|XP_002268352.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
gi|296090344|emb|CBI40163.3| unnamed protein product [Vitis vinifera]
Length = 197
Score = 179 bits (455), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/140 (63%), Positives = 110/140 (78%), Gaps = 10/140 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDD+LIDRK++E LL+ SS+QVT VDSG KALE+LGL + E N P
Sbjct: 9 FHVLAVDDNLIDRKLIEKLLKTSSFQVTAVDSGSKALEFLGLQE--EEQRNHHP------ 60
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNLI+TDY MPGMTGYDLL+++K SS KD+PVV+MSSEN+PSR+ CLEEGAE+
Sbjct: 61 -QEMEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSENIPSRINRCLEEGAED 119
Query: 168 FLLKPVRLSDLEKLQPRLLK 187
F LKPV+LSD+ KL+P LL+
Sbjct: 120 FFLKPVQLSDVSKLRPHLLR 139
>gi|388492888|gb|AFK34510.1| unknown [Medicago truncatula]
Length = 167
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 92/163 (56%), Positives = 121/163 (74%), Gaps = 8/163 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDR ++E LL+ SS+ VT VDSG KAL++LGL++ + N P +++ +
Sbjct: 4 FHVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVE--DEVRNEKPHSIAAE 61
Query: 109 KEES-RVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAE 166
++ VNLI+TDYCMPGMTGYDLL+++K S S KD+PVV+ SSENVPSR+ CLEEGAE
Sbjct: 62 TDQVVEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVITSSENVPSRINRCLEEGAE 121
Query: 167 EFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSN 209
EF LKPV+ SD+ KL+P LLK+ + NED +NK N
Sbjct: 122 EFFLKPVQQSDVNKLKPHLLKTKVK----NEDDLINNKRRIHN 160
>gi|357126832|ref|XP_003565091.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 213
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/141 (64%), Positives = 116/141 (82%), Gaps = 2/141 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK++E LL+ SSYQVT VDSG KALE LGL D +++S +S + S+
Sbjct: 11 FHVLAVDDSVIDRKLIEMLLKTSSYQVTTVDSGSKALEVLGLRDEGDSSSASSSPSSSSP 70
Query: 109 -KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+E VNLI+TDYCMPGMTGYDLL+R+K SS KD+PVV+MSSENVP+R+ CLE+GAE
Sbjct: 71 DHQEVDVNLIITDYCMPGMTGYDLLRRVKGSSSLKDIPVVIMSSENVPARINRCLEDGAE 130
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
EF LKPV+L+D++KL+ LL+
Sbjct: 131 EFFLKPVKLADMKKLKSHLLR 151
>gi|449449356|ref|XP_004142431.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
gi|449527272|ref|XP_004170636.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 173
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/147 (60%), Positives = 112/147 (76%), Gaps = 4/147 (2%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI---DNLENNSNASP 102
Q FHVLAVDDSL+DRK++E LL+ SS+ VT VDSG KALE LGL+ + ++S SP
Sbjct: 8 QPRFHVLAVDDSLVDRKLIERLLKTSSFNVTVVDSGSKALELLGLVRERNGTNHSSPISP 67
Query: 103 STLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCL 161
+E VNLI+TDYCMP MTG+DLL+++K S S KD+PVV+MSSENVPSR+ CL
Sbjct: 68 EDHRQHHQEIEVNLIITDYCMPEMTGFDLLRKIKESDSLKDIPVVIMSSENVPSRINRCL 127
Query: 162 EEGAEEFLLKPVRLSDLEKLQPRLLKS 188
EEGAEEFLLKPV+LSD+ KL+P + +
Sbjct: 128 EEGAEEFLLKPVKLSDVNKLKPFICRG 154
>gi|346703759|emb|CBX24427.1| hypothetical_protein [Oryza glaberrima]
Length = 207
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/148 (60%), Positives = 114/148 (77%), Gaps = 14/148 (9%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQ-------VTCVDSGDKALEYLGLIDNLENNSNAS 101
FHVLAVDDSL DRK++E LL+ SS+Q VT VDSG KALE+LGL D+ ++ +A
Sbjct: 9 FHVLAVDDSLPDRKLIERLLKTSSFQGLAFVCVVTTVDSGSKALEFLGLHDHEDSPISAQ 68
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMC 160
++ VNLI+TDYCMPGMTGYDLLK++K SS+ +D+PVV+MSS+N+PSR+ C
Sbjct: 69 ------SDQQVAVNLIITDYCMPGMTGYDLLKKIKESSYLRDIPVVIMSSDNIPSRINRC 122
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
LEEGA+EF LKPVRLSD+ KL+P +LKS
Sbjct: 123 LEEGADEFFLKPVRLSDMSKLKPHILKS 150
>gi|226492050|ref|NP_001146776.1| uncharacterized protein LOC100280379 [Zea mays]
gi|223942947|gb|ACN25557.1| unknown [Zea mays]
gi|413951289|gb|AFW83938.1| response regulator 4 [Zea mays]
Length = 233
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 90/146 (61%), Positives = 116/146 (79%), Gaps = 7/146 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK++E LL+ SSYQVT VDSG+KALE LGL DN +++ S+ S+
Sbjct: 10 FHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGAEDASPPSSSSSSS 69
Query: 109 ------KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCL 161
+E V+LI+TDYCMPGMTGYDLLKR+K SS KD+PVV+MSSENVP+R++ CL
Sbjct: 70 SSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCL 129
Query: 162 EEGAEEFLLKPVRLSDLEKLQPRLLK 187
++GAEEF LKPV+ +D++KL+ LLK
Sbjct: 130 QDGAEEFFLKPVKPADMKKLKSHLLK 155
>gi|255647513|gb|ACU24220.1| unknown [Glycine max]
Length = 191
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/141 (60%), Positives = 110/141 (78%), Gaps = 2/141 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDR ++E LL+ SS+ VT +DSG KAL++LGL ++ E + PS
Sbjct: 9 FHVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLAED-EQRNKEPPSIALES 67
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++ VNLI+TDYCMP MTGYDLLK++K S S KD+PVV+MSSENVP+R+ CLE+GA+E
Sbjct: 68 HQDVEVNLIITDYCMPEMTGYDLLKKIKESKSLKDIPVVIMSSENVPARINRCLEDGADE 127
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPV+ SD+ KL+P LLKS
Sbjct: 128 FFLKPVQQSDVNKLRPHLLKS 148
>gi|195644464|gb|ACG41700.1| RR4 - Corn type-A response regulator [Zea mays]
Length = 234
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/145 (61%), Positives = 116/145 (80%), Gaps = 6/145 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK++E LL+ SSYQVT V+SG+KALE LGL DN +++ S+ S+
Sbjct: 10 FHVLAVDDSIIDRKLIEMLLKSSSYQVTTVESGNKALELLGLRDNGAEDASPPSSSSSSS 69
Query: 109 -----KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLE 162
+E V+LI+TDYCMPGMTGYDLLKR+K SS KD+PVV+MSSENVP+R++ CL+
Sbjct: 70 SSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQ 129
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
+GAEEF LKPV+ +D++KL+ LLK
Sbjct: 130 DGAEEFFLKPVKPADMKKLKSHLLK 154
>gi|356541574|ref|XP_003539249.1| PREDICTED: two-component response regulator ARR9-like [Glycine max]
Length = 187
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 109/141 (77%), Gaps = 2/141 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDR ++E LL+ SS+ VT VDSG KAL++LGL++ + N P
Sbjct: 9 FHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALKFLGLVEE-KRNEEPPPCIALES 67
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++ VNLI+TDYCMP MTGYDLL+++K S S KD+PVV+MSSENVP+R+ CLEEGA+E
Sbjct: 68 HQDVEVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPARINRCLEEGADE 127
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPV+ SD+ KL+P L+KS
Sbjct: 128 FFLKPVQQSDVNKLRPHLMKS 148
>gi|162459025|ref|NP_001104855.1| LOC541630 [Zea mays]
gi|12060384|dbj|BAB20579.1| response regulator 4 [Zea mays]
Length = 235
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/146 (60%), Positives = 116/146 (79%), Gaps = 7/146 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK++E LL+ SSYQVT V+SG+KALE LGL DN +++ S+ S+
Sbjct: 10 FHVLAVDDSIIDRKLIEMLLKSSSYQVTTVESGNKALELLGLRDNGAEDASPPSSSSSSS 69
Query: 109 ------KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCL 161
+E V+LI+TDYCMPGMTGYDLLKR+K SS KD+PVV+MSSENVP+R++ CL
Sbjct: 70 SSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCL 129
Query: 162 EEGAEEFLLKPVRLSDLEKLQPRLLK 187
++GAEEF LKPV+ +D++KL+ LLK
Sbjct: 130 QDGAEEFFLKPVKPADMKKLKSHLLK 155
>gi|449453183|ref|XP_004144338.1| PREDICTED: two-component response regulator ARR9-like [Cucumis
sativus]
Length = 261
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 111/141 (78%), Gaps = 2/141 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK++E LL+ SSYQVT VDSG KALE+LG D ++ + S
Sbjct: 16 FHVLAVDDSVIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGY-DPGNSSIPSVSSNHHHH 74
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNL++TDYCMP MTGYDLLK++K S+ +++PVV+MSSENVP+R+ CLEEGAEE
Sbjct: 75 HQEVDVNLVITDYCMPEMTGYDLLKKIKGSTALRNIPVVIMSSENVPARINRCLEEGAEE 134
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPV+LSD+ +L+P +LK+
Sbjct: 135 FFLKPVQLSDVNRLRPHMLKT 155
>gi|449533717|ref|XP_004173818.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 255
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 117/157 (74%), Gaps = 8/157 (5%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK++E LL+ SSYQVT VDSG KALE+LG D ++ + S
Sbjct: 16 FHVLAVDDSVIDRKLIEKLLKTSSYQVTTVDSGSKALEFLGY-DPGNSSIPSVSSNHHHH 74
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+E VNL++TDYCMP MTGYDLLK++K S+ +++PVV+MSSENVP+R+ CLEEGAEE
Sbjct: 75 HQEVDVNLVITDYCMPEMTGYDLLKKIKGSTALRNIPVVIMSSENVPARINRCLEEGAEE 134
Query: 168 FLLKPVRLSDLEKLQPRLLKS------PNRSCGNNED 198
F LKPV+LSD+ +L+P +LK+ P R+ ++ D
Sbjct: 135 FFLKPVQLSDVNRLRPHMLKTKLKCDKPERTTEDHPD 171
>gi|363807796|ref|NP_001242179.1| uncharacterized protein LOC100818762 [Glycine max]
gi|255633210|gb|ACU16961.1| unknown [Glycine max]
Length = 172
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/141 (60%), Positives = 110/141 (78%), Gaps = 2/141 (1%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
F VLAVDDSLIDR ++E LL+ SS+ VT +DSG KAL++LGL+++ E + PS
Sbjct: 9 FQVLAVDDSLIDRMLIERLLKTSSFHVTALDSGSKALKFLGLVED-EQRNKEPPSIALES 67
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++ VNLI+TDYCMP MTGYDLLK++K S S KD+PVV+MSSENVP+R+ CLE+GA+E
Sbjct: 68 HQDVEVNLIITDYCMPEMTGYDLLKKIKESKSLKDIPVVIMSSENVPARINRCLEDGADE 127
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
F LKPV+ SD+ KL+P LLKS
Sbjct: 128 FFLKPVQQSDVNKLRPHLLKS 148
>gi|356555024|ref|XP_003545839.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 179
Score = 173 bits (439), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/142 (59%), Positives = 109/142 (76%), Gaps = 5/142 (3%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI-DNLENNSNASPSTLST 107
FHVLAVDDS+IDR ++E LL+ SS+ VT VDS KAL++LGL+ D L S +
Sbjct: 9 FHVLAVDDSIIDRMLIERLLKTSSFHVTTVDSATKALKFLGLVEDELRTFDTTVASEI-- 66
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAE 166
++ +NLI+TDYCMPGMTGYDLL+++K S S K++PVV+MSSENVPSR+ CLEEGAE
Sbjct: 67 -HQDVDINLIITDYCMPGMTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCLEEGAE 125
Query: 167 EFLLKPVRLSDLEKLQPRLLKS 188
EF LKPV+ +D+ KL+P L+KS
Sbjct: 126 EFFLKPVQQADVNKLKPHLMKS 147
>gi|109631206|gb|ABG35779.1| SRR200 [Striga asiatica]
Length = 158
Score = 173 bits (438), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 84/144 (58%), Positives = 113/144 (78%), Gaps = 5/144 (3%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q+ FHVLAVDDS+IDRK++E LL+ SSYQVT VDSG KALE+LGL+DN + NS +
Sbjct: 6 QEMRFHVLAVDDSIIDRKLIERLLKTSSYQVTVVDSGVKALEFLGLLDNDDTNSK----S 61
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
+S + V+LI+TDY MP +TGYDLL+++K S KD+PVV+MSSEN+PSR+ CLE+
Sbjct: 62 VSQPRSNHIVDLIITDYSMPALTGYDLLRKIKESEILKDIPVVIMSSENIPSRINSCLEQ 121
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA+EF +KPV+ SD+ KL+P L++
Sbjct: 122 GAQEFFVKPVQQSDVNKLRPHLMR 145
>gi|296090342|emb|CBI40161.3| unnamed protein product [Vitis vinifera]
Length = 161
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/156 (58%), Positives = 111/156 (71%), Gaps = 25/156 (16%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQ---------------VTCVDSGDKALEYLGLIDN 93
FHVLAVDDSLIDRK++E LL+ SS+Q VT VDSG KALE+LGL +
Sbjct: 9 FHVLAVDDSLIDRKLIEKLLKTSSFQDSKLIEKLLKTSSFQVTAVDSGSKALEFLGLQE- 67
Query: 94 LENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSEN 152
E N P +E+ VNLI+TDY MPGMTGYDLL+++K SS KD+PVV+MSSEN
Sbjct: 68 -EEQRNHHP-------QETEVNLIITDYSMPGMTGYDLLRKIKESSSLKDIPVVIMSSEN 119
Query: 153 VPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
+PSR+ CLEEGAE+F LKPV+LSD+ KL+P LL S
Sbjct: 120 IPSRINRCLEEGAEDFFLKPVQLSDVNKLRPHLLGS 155
>gi|33330868|gb|AAQ10677.1| type-A response regulator [Catharanthus roseus]
Length = 188
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/147 (59%), Positives = 111/147 (75%), Gaps = 10/147 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL+DRK++E LL+ S+YQVT VDSG KALE+LGL+D + S S
Sbjct: 10 FHVLAVDDSLVDRKLIERLLKTSAYQVTVVDSGIKALEFLGLLDEEKEISG------SNH 63
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAEE 167
++ VNLI+TDY MPGMTGYDLL+++K SS+ KD+PVV+MSSEN+PSR+ CLEEGA++
Sbjct: 64 QQVVEVNLIITDYSMPGMTGYDLLRKVKESSYLKDIPVVIMSSENIPSRINRCLEEGADD 123
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCG 194
F LKPV+ SD+ KL P + PN G
Sbjct: 124 FFLKPVKQSDVNKLIPLV---PNSFTG 147
>gi|356546360|ref|XP_003541594.1| PREDICTED: two-component response regulator ARR8-like [Glycine max]
Length = 179
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 83/142 (58%), Positives = 109/142 (76%), Gaps = 5/142 (3%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI-DNLENNSNASPSTLST 107
FHVLAVDDS+IDR ++E LL+ SS+ VT +DS KAL++LGL+ D L S +
Sbjct: 9 FHVLAVDDSIIDRMLIERLLKTSSFHVTTLDSATKALKFLGLVEDELRTFDTTVASEIH- 67
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAE 166
++ VNLI+TDYCMPG+TGYDLL+++K S S K++PVV+MSSENVPSR+ CLEEGAE
Sbjct: 68 --QDVDVNLIITDYCMPGLTGYDLLRKIKESKSLKNIPVVIMSSENVPSRINRCLEEGAE 125
Query: 167 EFLLKPVRLSDLEKLQPRLLKS 188
EF LKPV+ +D+ KL+P L+KS
Sbjct: 126 EFFLKPVQQADVNKLKPHLMKS 147
>gi|225465887|ref|XP_002267375.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
gi|296090339|emb|CBI40158.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/139 (61%), Positives = 105/139 (75%), Gaps = 16/139 (11%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL+DRK +E LL+ SS+QVT VDS KALE+LGL
Sbjct: 9 FHVLAVDDSLVDRKWIEKLLKTSSFQVTVVDSVSKALEFLGL---------------QEA 53
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++E +VNLI+TDY MPGMTGYDLL+++K S S KD+PVV+MSSEN+PSR+ CLEEGAE+
Sbjct: 54 EQERKVNLIITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRINRCLEEGAED 113
Query: 168 FLLKPVRLSDLEKLQPRLL 186
F LKPV+LSD+ KL+P LL
Sbjct: 114 FFLKPVQLSDVNKLRPHLL 132
>gi|408795928|gb|AFU91979.1| response regulator 1 protein [Pinus pinaster]
Length = 184
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/160 (55%), Positives = 121/160 (75%), Gaps = 12/160 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS++DRK++E LL++SSY+VT VDS KAL++LGL D+ E++ N
Sbjct: 15 FHVLAVDDSVLDRKLIEKLLKISSYRVTTVDSVRKALQFLGLEDD-EDDLNV-------- 65
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ +VN+I+TDYCMPGMTGYDLL+R+K SS KD+PVV+MSSENV SR + C+ EGA+E
Sbjct: 66 -DNIQVNMIITDYCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRKSRCMSEGAQE 124
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNET 207
FLLKPV+LSD++KL+ +L + RS S ++NK +T
Sbjct: 125 FLLKPVQLSDVKKLRSHIL-NKGRSRDQQSTSPSNNKRKT 163
>gi|15228338|ref|NP_190393.1| two-component response regulator ARR5 [Arabidopsis thaliana]
gi|51316111|sp|Q9SB04.2|ARR5_ARATH RecName: Full=Two-component response regulator ARR5; AltName:
Full=Response reactor 2
gi|3273198|dbj|BAA31144.1| responce reactor2 [Arabidopsis thaliana]
gi|4678318|emb|CAB41129.1| responce reactor2 [Arabidopsis thaliana]
gi|18252911|gb|AAL62382.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
gi|21389637|gb|AAM48017.1| response reactor 2 (ATRR2) [Arabidopsis thaliana]
gi|110741132|dbj|BAE98659.1| response reactor 2 [Arabidopsis thaliana]
gi|332644847|gb|AEE78368.1| two-component response regulator ARR5 [Arabidopsis thaliana]
Length = 184
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/148 (56%), Positives = 114/148 (77%), Gaps = 10/148 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS++DRK +E LLRVSS +VT VDS +AL+YLGL + ENNS S
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL--DGENNS-------SVG 75
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
E+ ++NLIMTDY MPGMTGY+LLK++K SS ++++PVV+MSSEN+ R+ CLEEGAE+
Sbjct: 76 FEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAED 135
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGN 195
FLLKPV+L+D+++L+ L+K+ R+ N
Sbjct: 136 FLLKPVKLADVKRLRDSLMKAEERAFKN 163
>gi|357456553|ref|XP_003598557.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355487605|gb|AES68808.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|357595944|gb|AET86869.1| cytokinin resposne regulator 9 [Medicago truncatula]
Length = 164
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 118/163 (72%), Gaps = 11/163 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDR ++E LL+ SS+ VT VDSG KAL++LGL++ + N P +++ +
Sbjct: 4 FHVLAVDDSVIDRMLIERLLKTSSFHVTVVDSGTKALKFLGLVE--DEVRNEKPHSIAAE 61
Query: 109 KEE-SRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAE 166
++ VNLI+TDYCMPGMTGYDLL+++K S S KD+PVV+MSSENV +T EEGAE
Sbjct: 62 TDQVVEVNLIITDYCMPGMTGYDLLRKIKESNSLKDIPVVIMSSENVHQGLT---EEGAE 118
Query: 167 EFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSN 209
EF LKPV+ SD+ KL+P LLK+ + NED +NK N
Sbjct: 119 EFFLKPVQQSDVNKLKPHLLKTKVK----NEDDLINNKRRIHN 157
>gi|224713626|gb|ACN62086.1| response regulator 1 [Pinus pinea]
Length = 184
Score = 165 bits (418), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 93/190 (48%), Positives = 130/190 (68%), Gaps = 31/190 (16%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVL VDDS++DRK++E LL++SSY+VT VD KAL++LGL D+ E++ N
Sbjct: 15 FHVLVVDDSVLDRKLIEKLLKISSYRVTAVDRVRKALQFLGLEDD-EDDLNV-------- 65
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ +VN+I+TDYCMPGMTGYDLL+R+K SS KD+PVV+MSSENV SR++ C+ EGAEE
Sbjct: 66 -DNIQVNMIITDYCMPGMTGYDLLRRVKESSAVKDIPVVIMSSENVESRISRCMSEGAEE 124
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRKALS-- 225
FLLKPV+LSD++KL+ +L G + D + ST+ + +KRK ++
Sbjct: 125 FLLKPVQLSDVKKLRSHILNK-----GGSRD------------QQSTSLSNNKRKTMTDS 167
Query: 226 -AEAPERRPK 234
+ ERRP+
Sbjct: 168 LSPPAERRPR 177
>gi|441415444|dbj|BAM74646.1| type-A response regulator [Torenia fournieri]
Length = 141
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/146 (58%), Positives = 115/146 (78%), Gaps = 12/146 (8%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID--NLENNSNASP 102
++E HVLAVDD+LIDR I+E LL+ SS +VT V++G +ALEYLGL D N+ ++ NA+
Sbjct: 4 KEEQVHVLAVDDNLIDRTIVEKLLKNSSCKVTTVENGRRALEYLGLGDDQNISSDDNAAA 63
Query: 103 STLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCL 161
S +VN+I+TDYCMPGMTGY+LLK++K SS KDVPVV+MSSENVP+R+ CL
Sbjct: 64 S---------KVNMIITDYCMPGMTGYELLKKIKESSVMKDVPVVIMSSENVPTRINKCL 114
Query: 162 EEGAEEFLLKPVRLSDLEKLQPRLLK 187
EEGAE F+LKP++ SD++KL+ +LL+
Sbjct: 115 EEGAEMFMLKPLKHSDMKKLKCQLLQ 140
>gi|359495010|ref|XP_003634897.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR9-like [Vitis vinifera]
Length = 141
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/140 (60%), Positives = 106/140 (75%), Gaps = 17/140 (12%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDRK +E LL+ SS+QVT +DS KALE+LG +
Sbjct: 9 FHVLAVDDSLIDRKWIEKLLKTSSFQVTVLDSVSKALEFLG---------------VQEA 53
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++E +VNLI+TDY MPGMTGYDLL+++K S S KD+PVV+MSSEN+PSR+T CLEEGAE+
Sbjct: 54 EQERKVNLIITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRITRCLEEGAED 113
Query: 168 FLLK-PVRLSDLEKLQPRLL 186
F LK PV+LSD+ KL+P LL
Sbjct: 114 FFLKLPVQLSDVNKLRPHLL 133
>gi|3953599|dbj|BAA34727.1| response regulator 5 [Arabidopsis thaliana]
Length = 184
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/145 (57%), Positives = 113/145 (77%), Gaps = 10/145 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS++DRK +E LLRVSS +VT VDS +AL+YLGL + ENNS S
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL--DGENNS-------SVG 75
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
E+ ++NLIMTDY MPGMTGY+LLK++K SS ++++PVV+MSSEN+ R+ CLEEGAE+
Sbjct: 76 FEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAED 135
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRS 192
FLLKPV+L+D+++L+ L+K+ R+
Sbjct: 136 FLLKPVKLADVKRLRDSLMKAEERA 160
>gi|109390454|gb|ABG33766.1| reponse regulator 6 [Musa acuminata]
Length = 156
Score = 164 bits (415), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 102/128 (79%), Gaps = 8/128 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS++DRK++E LL+ SS+QVT VDSG KAL++LGL + +AS S++
Sbjct: 34 FHVLAVDDSVLDRKLIERLLKTSSFQVTTVDSGTKALQFLGL-----HAEDASISSVHAD 88
Query: 109 K--EESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGA 165
+ E VNLI+TDYCMPGMTGYDLLK++K SS++D+PVV+MSSEN+PSR+ CLEEGA
Sbjct: 89 QLDVEVNVNLIITDYCMPGMTGYDLLKKIKESSSFRDIPVVIMSSENIPSRINRCLEEGA 148
Query: 166 EEFLLKPV 173
EF LKPV
Sbjct: 149 NEFFLKPV 156
>gi|297819426|ref|XP_002877596.1| hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp.
lyrata]
gi|297323434|gb|EFH53855.1| hypothetical protein ARALYDRAFT_906046 [Arabidopsis lyrata subsp.
lyrata]
Length = 183
Score = 163 bits (413), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/150 (55%), Positives = 114/150 (76%), Gaps = 11/150 (7%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
E HVLAVDDS++DRK +E LLRVSS +VT VDS +AL+YLGL + EN+S
Sbjct: 23 ELLHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL--DGENSS-------- 72
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGA 165
E+ ++NLIMTDY MPGMTGY+LLK++K SS ++++PVV+MSSEN+ R+ CLEEGA
Sbjct: 73 VGFEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGA 132
Query: 166 EEFLLKPVRLSDLEKLQPRLLKSPNRSCGN 195
E+FLLKPV+L+D+++L+ L+K+ R+ N
Sbjct: 133 EDFLLKPVKLADVKRLRDSLMKAEERAFKN 162
>gi|3323581|gb|AAC26635.1| two-component response regulator homolog [Arabidopsis thaliana]
Length = 184
Score = 163 bits (412), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 83/148 (56%), Positives = 113/148 (76%), Gaps = 10/148 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS++DRK +E LLRVSS +VT VDS +AL+YLGL + ENNS S
Sbjct: 25 LHVLAVDDSMVDRKFIERLLRVSSCKVTVVDSATRALQYLGL--DGENNS-------SVG 75
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
E+ ++NLIMTDY MPGMTGY+LLK++K SS ++++PVV+MSSEN+ R+ CLEEGAE+
Sbjct: 76 FEDLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILPRIDRCLEEGAED 135
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGN 195
FLLKPV+L+D+++L+ L+K+ + N
Sbjct: 136 FLLKPVKLADVKRLRDSLMKAEEGAFKN 163
>gi|309951224|emb|CBX43982.1| putative A-type response regulator 1a [Populus x canadensis]
Length = 255
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 127/163 (77%), Gaps = 2/163 (1%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++E HVLAVDDSL+DRK++E LL++SS +VT VDSG +AL+ LGL+D E+ S++S S+
Sbjct: 30 EEEGVHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLDE-EDKSSSSSSS 88
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
S + +V+LI+TDYCMPGMTGY+LLK++K S+ ++++PVV+MSSENV +R+ CLEE
Sbjct: 89 SSAGFDVLKVDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSENVVARIDRCLEE 148
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNE 206
GAE+F++KPV+LSD+++++ + RS N E+ + N N+
Sbjct: 149 GAEDFIVKPVKLSDVKRIRDYMASREVRSVQNQEERSSSNINK 191
>gi|224102663|ref|XP_002312769.1| type-a response regulator [Populus trichocarpa]
gi|222852589|gb|EEE90136.1| type-a response regulator [Populus trichocarpa]
Length = 258
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/163 (51%), Positives = 127/163 (77%), Gaps = 2/163 (1%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++E HVLAVDDSL+DRK++E LL++SS +VT VDSG +AL+ LGL+D E+ S++S S+
Sbjct: 30 EEEGVHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLDE-EDKSSSSSSS 88
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
S + +V+LI+TDYCMPGMTGY+LLK++K S+ ++++PVV+MSSENV +R+ CLEE
Sbjct: 89 SSAGFDVLKVDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSENVVARIDRCLEE 148
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNE 206
GAE+F++KPV+LSD+++++ + RS N E+ + N N+
Sbjct: 149 GAEDFIVKPVKLSDVKRIRDYMASREVRSVQNQEERSSSNINK 191
>gi|388507854|gb|AFK41993.1| unknown [Lotus japonicus]
Length = 209
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 123/177 (69%), Gaps = 11/177 (6%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPS 103
+ + HVLAVDDSL+DRK++E LL++SS +VT VDSG +AL+YLGL D EN+S
Sbjct: 15 EDSDELHVLAVDDSLVDRKVIERLLKISSCKVTVVDSGTRALQYLGL-DGEENSSIGFDG 73
Query: 104 TLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLE 162
+VNLIMTDY MPGMTGY+LLK++K SS ++++PVVVMSSEN+ +R+ CLE
Sbjct: 74 V--------KVNLIMTDYSMPGMTGYELLKKIKESSAFREIPVVVMSSENILTRIDRCLE 125
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFS 219
EGAE+FLLKPV+LSD+ +L+ ++ + G + ++ S+ + S ++ FS
Sbjct: 126 EGAEDFLLKPVKLSDVRRLRDFIMSGEVKK-GEKRSHKRNRSDDCSSCRPSLSNTFS 181
>gi|312283391|dbj|BAJ34561.1| unnamed protein product [Thellungiella halophila]
Length = 190
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 119/175 (68%), Gaps = 14/175 (8%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS +DRK +E LLRVSS +VT VDS +AL+YLGL + T+
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL--------DVDEKTVGL- 75
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
E+ +VNLIMTDY MPGMTGY+LLK++K SS +KD+PVVVMSSEN+ R+ CLEEGAE+
Sbjct: 76 -EDLKVNLIMTDYSMPGMTGYELLKKIKESSAFKDIPVVVMSSENILPRIDRCLEEGAED 134
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRK 222
FLLKPV+LSD+ +L+ L+K N S + S + ET N S +S S+ K
Sbjct: 135 FLLKPVKLSDVRRLRDSLIKVENLS---STKSIKKRELETENVYSLDSSVHSQLK 186
>gi|441415442|dbj|BAM74645.1| type-A response regulator [Torenia fournieri]
Length = 213
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/148 (52%), Positives = 114/148 (77%), Gaps = 6/148 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL+DRK++E L ++SS +VT V+SG +AL+YLGL +L + +N+ S
Sbjct: 15 FHVLAVDDSLVDRKVIEKLFKISSCKVTAVESGSRALQYLGLDGDLNDANNSVGSY---- 70
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
E ++NLI+TDY MPGMTG++LL+++K S + +++PVVVMSSENV +R+ CLEEGAEE
Sbjct: 71 -EGVKLNLIVTDYSMPGMTGFELLQKIKGSKALREIPVVVMSSENVLARIDRCLEEGAEE 129
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGN 195
FL+KPV+LSD+++L+ ++K + N
Sbjct: 130 FLVKPVKLSDVKRLRDFVIKGKMKKTNN 157
>gi|15218550|ref|NP_172517.1| two-component response regulator ARR4 [Arabidopsis thaliana]
gi|51315817|sp|O82798.1|ARR4_ARATH RecName: Full=Two-component response regulator ARR4; AltName:
Full=Response regulator 1
gi|5091539|gb|AAD39568.1|AC007067_8 T10O24.8 [Arabidopsis thaliana]
gi|3273196|dbj|BAA31143.1| responce regulator1 [Arabidopsis thaliana]
gi|3323583|gb|AAC26636.1| two-component response regulator homolog [Arabidopsis thaliana]
gi|3953597|dbj|BAA34726.1| response regulator 4 [Arabidopsis thaliana]
gi|87116590|gb|ABD19659.1| At1g10470 [Arabidopsis thaliana]
gi|110740750|dbj|BAE98474.1| putative response regulator 3 [Arabidopsis thaliana]
gi|332190462|gb|AEE28583.1| two-component response regulator ARR4 [Arabidopsis thaliana]
Length = 259
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/147 (55%), Positives = 113/147 (76%), Gaps = 11/147 (7%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDSL+DR ++E LLR++S +VT VDSG +ALE+LGL +N AS +
Sbjct: 35 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGL-----DNEKAS-----AEF 84
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ +V+LI+TDYCMPGMTGY+LLK++K SS +++VPVV+MSSENV +R+ CLEEGA++F
Sbjct: 85 DRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDF 144
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRSCGN 195
LLKPV+L+D+++L+ L K S GN
Sbjct: 145 LLKPVKLADVKRLRSHLTKDVKLSNGN 171
>gi|297849384|ref|XP_002892573.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
gi|297338415|gb|EFH68832.1| hypothetical protein ARALYDRAFT_888316 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/159 (54%), Positives = 119/159 (74%), Gaps = 15/159 (9%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDSL+DR ++E LLR++S +VT VDSG +ALE+LGL +N AS +
Sbjct: 32 HVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGL-----DNEKAS-----AEF 81
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ +V+LI+TDYCMPGMTGY+LLK++K SS +++VPVV+MSSENV +R+ CLEEGA++F
Sbjct: 82 DRLKVDLIITDYCMPGMTGYELLKKIKESSNFREVPVVIMSSENVLTRIDRCLEEGAQDF 141
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRSCGNN----EDSDNDN 203
LLKPV+L+D+++L+ L K S GN +DSD+ N
Sbjct: 142 LLKPVKLADVKRLRNHLTKDVKLSNGNKRKLPDDSDSVN 180
>gi|309951226|emb|CBX43983.1| putative A-type response regulator 1b [Populus x canadensis]
Length = 257
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 123/163 (75%), Gaps = 4/163 (2%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++E HVLAVDDSL+DRK++E LL++SS +VT VDSG +AL+ LGL+D +S S+
Sbjct: 30 EEEGVHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGWRALKLLGLLDE---EDKSSSSS 86
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
S + +V+LI+TDYCMPGMTGY+LLK++K S+ ++++PVV+MSSENV +R+ CLEE
Sbjct: 87 SSAGFDVLKVDLIITDYCMPGMTGYELLKKIKESTTFREIPVVIMSSENVVARIDRCLEE 146
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNE 206
GAE+F++KPV+LSD+++++ + RS N E+ + N N+
Sbjct: 147 GAEDFIVKPVKLSDVKRIRDYMASREVRSVQNQEERSSSNINK 189
>gi|370988689|dbj|BAL43558.1| type-A response regulator [Petunia x hybrida]
Length = 158
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 114/144 (79%), Gaps = 10/144 (6%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDD+L+DRK++E LL+ SS +VT ++G +ALEYLGL + E+++N + S
Sbjct: 24 HVLAVDDNLVDRKLVERLLKKSSCKVTTAENGLRALEYLGLGGDQEHSTNGNGS------ 77
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+VN+I+TDYCMPGMTGY+LLK++K SS KDVPVV+MSSEN+P+R+ C+EEGA+ F
Sbjct: 78 ---KVNMIITDYCMPGMTGYELLKKIKESSILKDVPVVIMSSENIPTRIDQCMEEGAQMF 134
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRS 192
+LKP++ SD+++L+ +L+ + +RS
Sbjct: 135 MLKPLKHSDVKRLRCQLINAEDRS 158
>gi|15218957|ref|NP_176202.1| two-component response regulator ARR3 [Arabidopsis thaliana]
gi|51316126|sp|Q9ZWS9.1|ARR3_ARATH RecName: Full=Two-component response regulator ARR3
gi|5080824|gb|AAD39333.1|AC007258_22 response regulator 3 [Arabidopsis thaliana]
gi|3953595|dbj|BAA34725.1| response regulator 3 [Arabidopsis thaliana]
gi|89111918|gb|ABD60731.1| At1g59940 [Arabidopsis thaliana]
gi|110737841|dbj|BAF00859.1| hypothetical protein [Arabidopsis thaliana]
gi|332195521|gb|AEE33642.1| two-component response regulator ARR3 [Arabidopsis thaliana]
Length = 231
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/155 (52%), Positives = 114/155 (73%), Gaps = 13/155 (8%)
Query: 34 IPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDN 93
I + E P Q HVLAVDDSL+DR ++E LLR++S +VT VDSG +ALE+LGL D+
Sbjct: 20 IGELESPPLDSDQ--VHVLAVDDSLVDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDD 77
Query: 94 LENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSEN 152
+ + + +V+LI+TDYCMPGMTGY+LLK++K S S+K+VPVV+MSSEN
Sbjct: 78 ----------KAAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSEN 127
Query: 153 VPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
V +R+ CLEEGAE+FLLKPV+L+D+++L+ L +
Sbjct: 128 VMTRIDRCLEEGAEDFLLKPVKLADVKRLRSYLTR 162
>gi|356562779|ref|XP_003549646.1| PREDICTED: two-component response regulator ARR5-like isoform 1
[Glycine max]
Length = 206
Score = 158 bits (399), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/141 (57%), Positives = 108/141 (76%), Gaps = 11/141 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDSL+DRK++E LL++SS +VT V+SG +AL+YLGL EN S S
Sbjct: 26 LHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGL--EGENGSLGFDSV---- 79
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+VNLIMTDY MPGMTGY+LLK++K SS ++++PVV+MSSENV +R+ CLEEGAE+
Sbjct: 80 ----KVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAED 135
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
FLLKPV+LSD+ +L+ ++K
Sbjct: 136 FLLKPVKLSDVRRLKDFIMKG 156
>gi|255540813|ref|XP_002511471.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223550586|gb|EEF52073.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 221
Score = 157 bits (398), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 112/153 (73%), Gaps = 11/153 (7%)
Query: 37 QEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLEN 96
E E HVLAVDDSL+DRK++E LL++SS +VT VDSG +AL+YLGL
Sbjct: 15 HEVGVSSNGSEELHVLAVDDSLVDRKVIERLLKISSCKVTAVDSGTRALQYLGL------ 68
Query: 97 NSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPS 155
+ S++ + +VNLIMTDY MPGMTGY+LLK++K SS ++++PVV+MSSEN+ +
Sbjct: 69 --DGEKSSVGFN--DLKVNLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILT 124
Query: 156 RVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
R+ CLEEGAEEF++KPV+LSD+++L+ +++
Sbjct: 125 RIDRCLEEGAEEFIVKPVKLSDVKRLKNFVMRG 157
>gi|370988685|dbj|BAL43556.1| type-A response regulator [Petunia x hybrida]
Length = 258
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/137 (55%), Positives = 109/137 (79%), Gaps = 10/137 (7%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDSL+DR ++E LL+++S +VT VDSG +AL++LGL D E+ S +
Sbjct: 26 HVLAVDDSLVDRIVIERLLKITSCKVTTVDSGMRALQFLGL-DEEES---------SVRI 75
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +V+LI+TDYCMPGMTGYDLLK++K SS++++PVV+MSSENV +R+ CLEEGAE+FL
Sbjct: 76 DGLKVDLIITDYCMPGMTGYDLLKKIKGSSFREIPVVIMSSENVLTRIDRCLEEGAEDFL 135
Query: 170 LKPVRLSDLEKLQPRLL 186
LKPV+L+D+++L+ +
Sbjct: 136 LKPVKLADVKRLKSFMF 152
>gi|297850294|ref|XP_002893028.1| hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp.
lyrata]
gi|297338870|gb|EFH69287.1| hypothetical protein ARALYDRAFT_889335 [Arabidopsis lyrata subsp.
lyrata]
Length = 209
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/146 (54%), Positives = 112/146 (76%), Gaps = 11/146 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS++DRK++E LLR+SS +VT V+SG +AL+YLGL D + SN
Sbjct: 24 LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGL-DGGKGASNL-------- 74
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++ +VNLI+TDY MPG+TGYDLLK++K SS +++VPVV+MSSEN+ R+ CL+EGAEE
Sbjct: 75 -KDLKVNLIVTDYSMPGLTGYDLLKKIKESSAFREVPVVIMSSENILPRIEECLKEGAEE 133
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSC 193
FLLKPV+L+D+++++ +LK+ C
Sbjct: 134 FLLKPVKLADVKRIKQLILKNEAEEC 159
>gi|297837533|ref|XP_002886648.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332489|gb|EFH62907.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 229
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/165 (50%), Positives = 116/165 (70%), Gaps = 13/165 (7%)
Query: 34 IPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDN 93
I + E P Q HVLAVDDSL+DR ++E LLR++S +VT VDSG +ALE+LGL D
Sbjct: 20 IGELESPPLDSDQ--VHVLAVDDSLLDRIVIERLLRITSCKVTAVDSGWRALEFLGLDDK 77
Query: 94 LENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSEN 152
+ + + +V+LI+TDYCMPGMTGY+LLK++K S S+K+VPVV+MSSEN
Sbjct: 78 ----------KAAVEFDRLKVDLIITDYCMPGMTGYELLKKIKESTSFKEVPVVIMSSEN 127
Query: 153 VPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNE 197
V +R+ CLEEGAE+FLLKPV+L+D+++L+ L K + N+
Sbjct: 128 VITRIDRCLEEGAEDFLLKPVKLADVKRLRNYLTKDVKVAADGNK 172
>gi|302804881|ref|XP_002984192.1| type A response regulator [Selaginella moellendorffii]
gi|300148041|gb|EFJ14702.1| type A response regulator [Selaginella moellendorffii]
Length = 278
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 105/138 (76%), Gaps = 6/138 (4%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS +DRK++E LL+ SSY+VT VDS +ALE LG++ + N S L+ K
Sbjct: 8 IHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINVSSHLLAIK 67
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+NLI+TDYCMP MTGYDLLK++K SS K++PVV+MSSENV R+TMC+ EGA+E
Sbjct: 68 -----INLIITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITMCMAEGAKE 122
Query: 168 FLLKPVRLSDLEKLQPRL 185
F+LKP+R++D+++L+ +
Sbjct: 123 FILKPLRVADVKRLRSHI 140
>gi|224102495|ref|XP_002312699.1| type-a response regulator [Populus trichocarpa]
gi|222852519|gb|EEE90066.1| type-a response regulator [Populus trichocarpa]
Length = 247
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 85/163 (52%), Positives = 124/163 (76%), Gaps = 5/163 (3%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++E HVLAVDDS +DRK++E LL++SS +VT VDSG AL+ LGL+D+ E + ++S S+
Sbjct: 30 EEEEVHVLAVDDSFVDRKVIERLLKISSCKVTAVDSGWGALKLLGLLDDEEEDKSSSSSS 89
Query: 105 LSTKK--EESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCL 161
S+ E +V+LI+TDYCMPGMTGY+LLK++K SS++++PVV+MSSENV +R+ CL
Sbjct: 90 SSSSAGFEGLKVDLIITDYCMPGMTGYELLKKIKESSSFREIPVVIMSSENVMARIDRCL 149
Query: 162 EEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNK 204
EEGAEEF+ KPV+LSD+++L+ + + R + + S N NK
Sbjct: 150 EEGAEEFIAKPVKLSDVKRLRDYYMAT--REIRSVQSSSNVNK 190
>gi|15242000|ref|NP_201097.1| two-component response regulator ARR6 [Arabidopsis thaliana]
gi|51316124|sp|Q9ZWS6.2|ARR6_ARATH RecName: Full=Two-component response regulator ARR6
gi|3953601|dbj|BAA34728.1| response regulator 6 [Arabidopsis thaliana]
gi|10177470|dbj|BAB10861.1| response regulator 6 [Arabidopsis thaliana]
gi|28466913|gb|AAO44065.1| At5g62920 [Arabidopsis thaliana]
gi|110735683|dbj|BAE99822.1| response regulator 6 [Arabidopsis thaliana]
gi|332010291|gb|AED97674.1| two-component response regulator ARR6 [Arabidopsis thaliana]
Length = 186
Score = 157 bits (396), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/140 (58%), Positives = 107/140 (76%), Gaps = 11/140 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS +DRK +E LLRVSS +VT VDS +AL+YLGL ++E S
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL--DVEEKSVGF------- 75
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
E+ +VNLIMTDY MPGMTGY+LLK++K SS +++VPVV+MSSEN+ R+ CLEEGAE+
Sbjct: 76 -EDLKVNLIMTDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILPRIDRCLEEGAED 134
Query: 168 FLLKPVRLSDLEKLQPRLLK 187
FLLKPV+LSD+++L+ L+K
Sbjct: 135 FLLKPVKLSDVKRLRDSLMK 154
>gi|449434875|ref|XP_004135221.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
gi|449478516|ref|XP_004155339.1| PREDICTED: two-component response regulator ARR3-like [Cucumis
sativus]
Length = 233
Score = 156 bits (395), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/152 (52%), Positives = 114/152 (75%), Gaps = 13/152 (8%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDSL+DR ++E LLR+++ +VT VDSG +AL+YLGL D E NS L
Sbjct: 30 HVLAVDDSLVDRTVIERLLRLTACRVTAVDSGIRALQYLGLQD--ETNSQVGFDGL---- 83
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+V++I+TDYCMPGMTGY+LLK++K SS +++PVV+MSSENV +R+ CLEEGAE+F
Sbjct: 84 ---KVDMIITDYCMPGMTGYELLKKIKESSTLREIPVVIMSSENVVARIDRCLEEGAEDF 140
Query: 169 LLKPVRLSDLEKLQPRLL---KSPNRSCGNNE 197
++KPV+LSD+++L+ ++ K+ N G N+
Sbjct: 141 IVKPVKLSDVKRLREYMVGDEKTGNERSGINK 172
>gi|33330864|gb|AAQ10675.1| type-A response regulator [Catharanthus roseus]
Length = 254
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 80/153 (52%), Positives = 113/153 (73%), Gaps = 17/153 (11%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDSL+DRK++E LL++S +VT V+SG +AL+YLGL + ST+
Sbjct: 14 LHVLAVDDSLVDRKVIERLLKISCCKVTAVESGRRALQYLGL--------DGEKSTVGF- 64
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ +VNLI+TDY MPGMTGY+LLK++K SS K++PVV+MSSEN+ +R+ CLEEGAEE
Sbjct: 65 -DGLKVNLILTDYSMPGMTGYELLKKIKGSSTLKEIPVVIMSSENILTRIDRCLEEGAEE 123
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD 200
FL+KPV+LSD+++++ +LK G +ED +
Sbjct: 124 FLVKPVKLSDVKRIKDFVLK------GGDEDGE 150
>gi|148608690|gb|ABQ95669.1| response regulator, partial [Malus x domestica]
Length = 209
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 115/158 (72%), Gaps = 12/158 (7%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDSL+DRK++E LL++SS +VT VDSG +AL++LGL + E +S A L
Sbjct: 1 HVLAVDDSLVDRKVIERLLKISSCRVTTVDSGRRALQFLGL--DEEKSSTAGFDGL---- 54
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+V+LI+TDYCMPGMTGY+LLK++K SS +K PVV+MSSENV +R+ CLEEGAE+F
Sbjct: 55 ---KVDLIITDYCMPGMTGYELLKKIKESSTFKATPVVIMSSENVLARIDRCLEEGAEDF 111
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNE 206
++KPV+L+D+++L+ + + R G E NK +
Sbjct: 112 IVKPVKLADVKRLKDYM--TTARDVGVEESGGGMNKRK 147
>gi|297797275|ref|XP_002866522.1| hypothetical protein ARALYDRAFT_496477 [Arabidopsis lyrata subsp.
lyrata]
gi|297312357|gb|EFH42781.1| hypothetical protein ARALYDRAFT_496477 [Arabidopsis lyrata subsp.
lyrata]
Length = 186
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/142 (57%), Positives = 106/142 (74%), Gaps = 11/142 (7%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
+ HVLAVDDS +DRK +E LLRVSS +VT VDS +AL+YLGL +E S
Sbjct: 23 DLLHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL--GVEEKSVGF----- 75
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGA 165
++ +VNLIMTDY MPGMTGY+LLK++K SS ++ VPVV+MSSEN+ R+ CLEEGA
Sbjct: 76 ---QDLKVNLIMTDYSMPGMTGYELLKKIKESSAFRQVPVVIMSSENILPRIDRCLEEGA 132
Query: 166 EEFLLKPVRLSDLEKLQPRLLK 187
E+FLLKPV+LSD+E+L+ L+K
Sbjct: 133 EDFLLKPVKLSDVERLRDSLMK 154
>gi|148608687|gb|ABQ95668.1| response regulator, partial [Malus x domestica]
Length = 212
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/158 (51%), Positives = 115/158 (72%), Gaps = 12/158 (7%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDSL+DRK++E LL++SS +VT VDSG +AL++LGL + E +S A L
Sbjct: 1 HVLAVDDSLVDRKVIERLLKISSCRVTTVDSGRRALQFLGL--DEEKSSTAGFDGL---- 54
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+V+LI+TDYCMPGMTGY+LLK++K SS +K PVV+MSSENV +R+ CLEEGAE+F
Sbjct: 55 ---KVDLIITDYCMPGMTGYELLKKIKESSTFKATPVVIMSSENVLARIDRCLEEGAEDF 111
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNE 206
++KPV+L+D+++L+ + + R G E NK +
Sbjct: 112 IVKPVKLADVKRLKDYM--TTARDVGVEESGGGMNKRK 147
>gi|225448707|ref|XP_002280746.1| PREDICTED: two-component response regulator ARR17 [Vitis vinifera]
Length = 153
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/137 (58%), Positives = 106/137 (77%), Gaps = 10/137 (7%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDD+LIDRK++E LL+ S +VT ++G +ALEYLGL DN + + AS S
Sbjct: 22 HVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQQTSHKASVS------ 75
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+VNLI+TDYCMPGMTGY+LLKR+K SS K+VPVV+MSSEN+P+R+ CLEEGA+ F
Sbjct: 76 ---KVNLIITDYCMPGMTGYELLKRVKQSSILKEVPVVIMSSENIPTRINKCLEEGAQMF 132
Query: 169 LLKPVRLSDLEKLQPRL 185
+LKP++ SD++KL+ L
Sbjct: 133 MLKPLKQSDVKKLRCYL 149
>gi|351721065|ref|NP_001237197.1| uncharacterized protein LOC100527518 [Glycine max]
gi|255632528|gb|ACU16614.1| unknown [Glycine max]
Length = 211
Score = 155 bits (392), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/142 (56%), Positives = 107/142 (75%), Gaps = 12/142 (8%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
VLAVDDSL+DRK++E LLR+SS +VT V+SG +AL+YLGL + N+S S K
Sbjct: 26 LQVLAVDDSLVDRKVIERLLRISSCKVTVVESGTRALQYLGL-----DGGNSSLGFDSVK 80
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK--VSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
VNLIMTDY MPGMTGY+LLK++K S ++++PVV+MSSENV +R+ CLEEGAE
Sbjct: 81 -----VNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVIMSSENVLTRIDRCLEEGAE 135
Query: 167 EFLLKPVRLSDLEKLQPRLLKS 188
+FLLKPV+LSD+ +L+ ++K
Sbjct: 136 DFLLKPVKLSDVRRLKDFIMKG 157
>gi|356562781|ref|XP_003549647.1| PREDICTED: two-component response regulator ARR5-like isoform 2
[Glycine max]
Length = 213
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/143 (55%), Positives = 108/143 (75%), Gaps = 8/143 (5%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS-- 106
HVLAVDDSL+DRK++E LL++SS +VT V+SG +AL+YLGL N S L
Sbjct: 26 LHVLAVDDSLVDRKVIERLLKISSCKVTVVESGTRALQYLGL-----EGENGSLGCLFDW 80
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGA 165
+ +VNLIMTDY MPGMTGY+LLK++K SS ++++PVV+MSSENV +R+ CLEEGA
Sbjct: 81 LWLQSVKVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGA 140
Query: 166 EEFLLKPVRLSDLEKLQPRLLKS 188
E+FLLKPV+LSD+ +L+ ++K
Sbjct: 141 EDFLLKPVKLSDVRRLKDFIMKG 163
>gi|388492124|gb|AFK34128.1| unknown [Lotus japonicus]
gi|388498306|gb|AFK37219.1| unknown [Lotus japonicus]
Length = 207
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/145 (54%), Positives = 108/145 (74%), Gaps = 12/145 (8%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS +DRK++E LLR+SS +VT VDSG +AL+YLGL + E +S S
Sbjct: 20 LHVLAVDDSHVDRKVIERLLRISSCKVTVVDSGTRALQYLGL--DGEKSSIGLDSV---- 73
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK--VSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+VNLIMTDY MPGMTGY+LLK++K S ++++PVVVMSSEN+ +R+ CLEEGAE
Sbjct: 74 ----KVNLIMTDYSMPGMTGYELLKKIKQESSVFREIPVVVMSSENILTRIDSCLEEGAE 129
Query: 167 EFLLKPVRLSDLEKLQPRLLKSPNR 191
+FLLKPV+LSD+++L +++ +
Sbjct: 130 DFLLKPVKLSDVKRLTDFIMRGGEK 154
>gi|297736479|emb|CBI25350.3| unnamed protein product [Vitis vinifera]
Length = 141
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/137 (58%), Positives = 106/137 (77%), Gaps = 10/137 (7%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDD+LIDRK++E LL+ S +VT ++G +ALEYLGL DN + + AS S
Sbjct: 10 HVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQQTSHKASVS------ 63
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+VNLI+TDYCMPGMTGY+LLKR+K SS K+VPVV+MSSEN+P+R+ CLEEGA+ F
Sbjct: 64 ---KVNLIITDYCMPGMTGYELLKRVKQSSILKEVPVVIMSSENIPTRINKCLEEGAQMF 120
Query: 169 LLKPVRLSDLEKLQPRL 185
+LKP++ SD++KL+ L
Sbjct: 121 MLKPLKQSDVKKLRCYL 137
>gi|296086487|emb|CBI32076.3| unnamed protein product [Vitis vinifera]
Length = 221
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 114/152 (75%), Gaps = 12/152 (7%)
Query: 32 EDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI 91
++I + P ++E HVLAVDDSL+DRK++E LL++SS +VT VDSG +AL++LGL
Sbjct: 14 DEIGGFDLSPGHSEEEA-HVLAVDDSLVDRKVIERLLKISSCKVTAVDSGRRALQFLGL- 71
Query: 92 DNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSS 150
+ E NS +V+LI+TDYCMPGMTGY+LLK++K SS +++ PVV+MSS
Sbjct: 72 -DEEKNSAGLDGL--------KVDLIITDYCMPGMTGYELLKKIKESSTFRETPVVIMSS 122
Query: 151 ENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQ 182
EN+ +R+ CLEEGAE+F++KPV+LSD+++L+
Sbjct: 123 ENILTRIDRCLEEGAEDFIVKPVKLSDVKRLK 154
>gi|255558348|ref|XP_002520201.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223540693|gb|EEF42256.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 258
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 83/166 (50%), Positives = 120/166 (72%), Gaps = 19/166 (11%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDSL+DRK++E LL+++S +VT VDSG +AL++LGL + ST
Sbjct: 30 HVLAVDDSLVDRKVIERLLKITSCKVTAVDSGRRALQFLGLDEEK-----------STSI 78
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ +V+LI+TDYCMPGMTGY+LLK++K SS ++++PVV+MSSENV +R+ CLEEGAE+F
Sbjct: 79 QGLKVDLIITDYCMPGMTGYELLKKIKESSTFREIPVVIMSSENVMARIDRCLEEGAEDF 138
Query: 169 LLKPVRLSDLEKLQPRL------LKSPNRSCG-NNEDSDNDNKNET 207
L+KPV+LSD+++++ + LKS S NN +N NK ++
Sbjct: 139 LVKPVKLSDVKRIRDYMTARELKLKSQQTSHNFNNSTGNNVNKRKS 184
>gi|147768948|emb|CAN69259.1| hypothetical protein VITISV_026384 [Vitis vinifera]
Length = 210
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/152 (51%), Positives = 114/152 (75%), Gaps = 12/152 (7%)
Query: 32 EDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI 91
++I + P ++E HVLAVDDSL+DRK++E LL++SS +VT VDSG +AL++LGL
Sbjct: 3 DEIGGFDLSPGHSEEEA-HVLAVDDSLVDRKVIERLLKISSCKVTAVDSGRRALQFLGL- 60
Query: 92 DNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSS 150
+ E NS +V+LI+TDYCMPGMTGY+LLK++K SS +++ PVV+MSS
Sbjct: 61 -DEEKNSAGLDGL--------KVDLIITDYCMPGMTGYELLKKIKESSTFRETPVVIMSS 111
Query: 151 ENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQ 182
EN+ +R+ CLEEGAE+F++KPV+LSD+++L+
Sbjct: 112 ENILTRIDRCLEEGAEDFIVKPVKLSDVKRLK 143
>gi|15221927|ref|NP_173339.1| two-component response regulator ARR7 [Arabidopsis thaliana]
gi|51316125|sp|Q9ZWS7.1|ARR7_ARATH RecName: Full=Two-component response regulator ARR7
gi|8778291|gb|AAF79300.1|AC068602_23 F14D16.20 [Arabidopsis thaliana]
gi|3953603|dbj|BAA34729.1| response regulator 7 [Arabidopsis thaliana]
gi|88193788|gb|ABD42983.1| At1g19050 [Arabidopsis thaliana]
gi|332191674|gb|AEE29795.1| two-component response regulator ARR7 [Arabidopsis thaliana]
Length = 206
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 112/146 (76%), Gaps = 11/146 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS++DRK++E LLR+SS +VT V+SG +AL+YLGL D + SN
Sbjct: 24 LHVLAVDDSIVDRKVIERLLRISSCKVTTVESGTRALQYLGL-DGGKGASNL-------- 74
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++ +VNLI+TDY MPG++GYDLLK++K SS +++VPVV+MSSEN+ R+ CL+EGAEE
Sbjct: 75 -KDLKVNLIVTDYSMPGLSGYDLLKKIKESSAFREVPVVIMSSENILPRIQECLKEGAEE 133
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSC 193
FLLKPV+L+D+++++ ++++ C
Sbjct: 134 FLLKPVKLADVKRIKQLIMRNEAEEC 159
>gi|351724591|ref|NP_001236551.1| uncharacterized protein LOC100499827 [Glycine max]
gi|255626955|gb|ACU13822.1| unknown [Glycine max]
Length = 146
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/138 (56%), Positives = 104/138 (75%), Gaps = 11/138 (7%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDD+LIDRK++E LLR SS +VT ++G +ALE LGL +NN N
Sbjct: 18 HVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNNMNG--------- 68
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
S+VN+I+TDYCMPGMTGY+LLK++K SS K+VPVV+MSSEN+P+R+ CLEEGA+ F
Sbjct: 69 -RSKVNMIITDYCMPGMTGYELLKKIKESSVMKEVPVVIMSSENIPTRINKCLEEGAQMF 127
Query: 169 LLKPVRLSDLEKLQPRLL 186
+LKP++ SD+ KL +L+
Sbjct: 128 ILKPLKQSDVRKLTCQLM 145
>gi|302798272|ref|XP_002980896.1| hypothetical protein SELMODRAFT_444661 [Selaginella moellendorffii]
gi|300151435|gb|EFJ18081.1| hypothetical protein SELMODRAFT_444661 [Selaginella moellendorffii]
Length = 222
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 111/160 (69%), Gaps = 12/160 (7%)
Query: 25 QEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSS--YQVTCVDSGD 82
+E G + +P Q HVLAVDDSL+DR ++E LL+ SS ++VT VDS
Sbjct: 31 KEGGGHVLSLPSTSSSSSSSSQ--IHVLAVDDSLVDRTVIERLLKTSSSSFKVTAVDSAL 88
Query: 83 KALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWK 141
+ALE LG++D ASP+ + E ++++I+TDYCMP MTGYDLLKR+K VSS K
Sbjct: 89 RALEILGIVDG-----QASPA--AAPSEGIQISMIITDYCMPHMTGYDLLKRVKGVSSLK 141
Query: 142 DVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKL 181
++PVV+MSSENV R+ C EEGAE+F++KPV+L+D+++L
Sbjct: 142 EIPVVIMSSENVEQRINSCYEEGAEDFIIKPVKLADVKRL 181
>gi|168029974|ref|XP_001767499.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681205|gb|EDQ67634.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 144
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 103/136 (75%), Gaps = 13/136 (9%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+HVLAVDDS+IDRK++E LL+ SSY+VT V+S +ALEYLGL S S S+
Sbjct: 19 YHVLAVDDSIIDRKVIERLLKTSSYKVTTVNSALRALEYLGL----------SESCSSSG 68
Query: 109 KEESR-VNLIMTDYCMPGMTGYDLLKRLKV--SSWKDVPVVVMSSENVPSRVTMCLEEGA 165
K R VNLIMTDYCMPGMTGYDLLK +K S++K++PV+VMSSEN +R+ CL EGA
Sbjct: 69 KPNVRAVNLIMTDYCMPGMTGYDLLKIVKAETSAFKELPVIVMSSENDSNRIKSCLAEGA 128
Query: 166 EEFLLKPVRLSDLEKL 181
E+FL+KPV+L D+++L
Sbjct: 129 EDFLIKPVQLEDVQRL 144
>gi|357486271|ref|XP_003613423.1| Two-component response regulator ARR3 [Medicago truncatula]
gi|355514758|gb|AES96381.1| Two-component response regulator ARR3 [Medicago truncatula]
Length = 237
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 110/138 (79%), Gaps = 9/138 (6%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENN-SNASPSTLSTK 108
HVLAVDDSL+DRK++E LL++S+ +VT VDSG +AL++LGL+D E + S+A L
Sbjct: 17 HVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGLVDEKETSESDAFVPGL--- 73
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+V+L++TDYCMPGMTGY+LLK++K S +++ +PVV+MSSEN+ R+ CLEEGAE+
Sbjct: 74 ----KVDLVITDYCMPGMTGYELLKKIKESTTFRAIPVVIMSSENILPRIDRCLEEGAED 129
Query: 168 FLLKPVRLSDLEKLQPRL 185
F++KPV+LSD+++L+ +
Sbjct: 130 FIVKPVKLSDVKRLKGYM 147
>gi|224135725|ref|XP_002322145.1| type-a arp3-like response regulator [Populus trichocarpa]
gi|222869141|gb|EEF06272.1| type-a arp3-like response regulator [Populus trichocarpa]
Length = 192
Score = 153 bits (387), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 109/141 (77%), Gaps = 11/141 (7%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
E HVLAVDDS +DRK++E LL++SS +VT V+SG +AL+YLGL + S++
Sbjct: 27 EELHVLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGL--------DGEKSSVG 78
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGA 165
+ ++NLIMTDY MPGMTGY+LLK++K SS ++++PVV+MSSEN+ +R+ CLEEGA
Sbjct: 79 FN--DLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILARIDRCLEEGA 136
Query: 166 EEFLLKPVRLSDLEKLQPRLL 186
EE++LKPV+LSD+++++ ++
Sbjct: 137 EEYILKPVKLSDVKRIKDVIM 157
>gi|356516718|ref|XP_003527040.1| PREDICTED: two-component response regulator ARR6-like [Glycine max]
Length = 204
Score = 153 bits (387), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 109/149 (73%), Gaps = 11/149 (7%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P+ HVLAVDDS +DRK++E LL++SS +VT V+SG +AL+YLGL + E +S
Sbjct: 13 PEVGGAGKLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGL--DGEKSSIG 70
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTM 159
S VNLIMTDY MPGMTGY+LLK++K SS +++VPVVVMSSEN+ +R+
Sbjct: 71 FDSV--------DVNLIMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDS 122
Query: 160 CLEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
CLEEGAEEFLLKPV+LSD++++ +++
Sbjct: 123 CLEEGAEEFLLKPVKLSDVKRVTDFIMRG 151
>gi|351725781|ref|NP_001238384.1| uncharacterized protein LOC100306152 [Glycine max]
gi|255627697|gb|ACU14193.1| unknown [Glycine max]
Length = 201
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 80/149 (53%), Positives = 110/149 (73%), Gaps = 11/149 (7%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P+ HVLAVDDS +DRK++E LL++SS +VT V+SG +AL+YLGL + E +S
Sbjct: 13 PEVCAAGKLHVLAVDDSHVDRKVIERLLKISSCKVTVVESGSRALQYLGL--DGEKSSIG 70
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTM 159
S +VNLIMTDY MPGMTGY+LLK++K SS +++VPVVVMSSEN+ +R+
Sbjct: 71 LDSV--------KVNLIMTDYSMPGMTGYELLKKIKESSVFREVPVVVMSSENILTRIDS 122
Query: 160 CLEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
CLEEGAEEFLLKPV+LSD++++ +++
Sbjct: 123 CLEEGAEEFLLKPVKLSDVKRVTDFIMRG 151
>gi|302755905|ref|XP_002961376.1| type A response regulator [Selaginella moellendorffii]
gi|300170035|gb|EFJ36636.1| type A response regulator [Selaginella moellendorffii]
Length = 220
Score = 153 bits (386), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 104/136 (76%), Gaps = 10/136 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSS--YQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
HVLAVDDSL+DR ++E LL+ SS ++VT VDS +ALE LG++D ASP+ +
Sbjct: 51 IHVLAVDDSLVDRTVIERLLKTSSSSFKVTAVDSALRALEILGIVDG-----QASPA--A 103
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGA 165
E ++++I+TDYCMP MTGYDLLKR+K VSS K++PVV+MSSENV R+ C EEGA
Sbjct: 104 APSEGIQISMIITDYCMPHMTGYDLLKRVKGVSSLKEIPVVIMSSENVEQRINSCYEEGA 163
Query: 166 EEFLLKPVRLSDLEKL 181
E+F++KPV+L+D+++L
Sbjct: 164 EDFIIKPVKLADVKRL 179
>gi|168001998|ref|XP_001753701.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695108|gb|EDQ81453.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 132
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 104/135 (77%), Gaps = 11/135 (8%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+HVLAVDDS+IDRK++E LL+ SSY+VT V+S +ALEYLGL + S ST S K
Sbjct: 7 YHVLAVDDSIIDRKVIERLLKTSSYKVTTVNSALRALEYLGL--------SESCST-SVK 57
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKV--SSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+ VNLIMTDYCMP MTGYDLLK +K S++K++PV+VMSSEN +R+ CLEEGA+
Sbjct: 58 ANKVTVNLIMTDYCMPEMTGYDLLKIVKAETSAFKELPVIVMSSENDSNRIKRCLEEGAK 117
Query: 167 EFLLKPVRLSDLEKL 181
EFL+KPV++ D+++L
Sbjct: 118 EFLIKPVQIEDVQRL 132
>gi|224135721|ref|XP_002322144.1| type-a response regulator [Populus trichocarpa]
gi|222869140|gb|EEF06271.1| type-a response regulator [Populus trichocarpa]
gi|309951242|emb|CBX43991.1| putative A-type response regulator 10 [Populus x canadensis]
Length = 223
Score = 153 bits (386), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 107/137 (78%), Gaps = 11/137 (8%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
E HVLAVDDS +DRK++E LL++SS +VT V+SG +AL+YLGL + S++
Sbjct: 27 EELHVLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGL--------DGEKSSVG 78
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGA 165
+ ++NLIMTDY MPGMTGY+LLK++K SS ++++PVV+MSSEN+ +R+ CLEEGA
Sbjct: 79 FN--DLKINLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENILARIDRCLEEGA 136
Query: 166 EEFLLKPVRLSDLEKLQ 182
EE++LKPV+LSD+++++
Sbjct: 137 EEYILKPVKLSDVKRIK 153
>gi|302804879|ref|XP_002984191.1| type A response regulator [Selaginella moellendorffii]
gi|300148040|gb|EFJ14701.1| type A response regulator [Selaginella moellendorffii]
Length = 272
Score = 152 bits (385), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 74/138 (53%), Positives = 105/138 (76%), Gaps = 12/138 (8%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS +DRK++E LL+ SSY+VT VDS +ALE LG++ ++P ++
Sbjct: 8 IHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIV-------GSAPVVINAI 60
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
K +NLI+TDYCMP MTGYDLLK++K SS K++PVV+MSSENV R+TMC+ EGA+E
Sbjct: 61 K----INLIITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERITMCMAEGAKE 116
Query: 168 FLLKPVRLSDLEKLQPRL 185
F+LKP+R++D+++L+ +
Sbjct: 117 FILKPLRVADVKRLRSHI 134
>gi|148608693|gb|ABQ95670.1| type A response regulator, partial [Malus x domestica]
Length = 194
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 107/143 (74%), Gaps = 11/143 (7%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HV AVDDS +DRK++E LL++SS +VT VDSG +ALEYLGL + S++
Sbjct: 1 HVFAVDDSHVDRKVIERLLKISSCKVTAVDSGTRALEYLGL--------DGEKSSVGF-- 50
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ +VNLI+TDY MPGMTGY+LLK++K SS +++VPVV+MSSEN+ +R+ CLEEGAEE+
Sbjct: 51 DNMKVNLIITDYSMPGMTGYELLKKIKESSAFREVPVVIMSSENILTRIDRCLEEGAEEY 110
Query: 169 LLKPVRLSDLEKLQPRLLKSPNR 191
++KPV+LSD+ +L+ ++ R
Sbjct: 111 IVKPVKLSDVNRLKNFMMGGGER 133
>gi|225465889|ref|XP_002266250.1| PREDICTED: two-component response regulator ARR9 [Vitis vinifera]
Length = 150
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 102/139 (73%), Gaps = 12/139 (8%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK +E LL+ SS+QVT V S KALE+LGL + N +
Sbjct: 9 FHVLAVDDSIIDRKWIEKLLKTSSFQVTVVGSVSKALEFLGLQKAEQRNHH--------- 59
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ ++VNLI+T Y MPGMTGYDLLK++K S S K +PVV+MSSEN+PSR+ CL EG ++
Sbjct: 60 -QGTKVNLIITYYSMPGMTGYDLLKKIKESTSLKGIPVVIMSSENIPSRINRCL-EGEKD 117
Query: 168 FLLKPVRLSDLEKLQPRLL 186
F LKPV+LSD+ KL+P LL
Sbjct: 118 FFLKPVQLSDVNKLRPHLL 136
>gi|147837871|emb|CAN60564.1| hypothetical protein VITISV_013996 [Vitis vinifera]
Length = 154
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/138 (57%), Positives = 104/138 (75%), Gaps = 11/138 (7%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDD+LIDRK++E LL+ S +VT ++G +ALEYLGL DN + + AS S
Sbjct: 22 HVLAVDDNLIDRKLIEKLLKNFSCRVTTAENGLRALEYLGLGDNQQTSHKASVS------ 75
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLK--VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+VNLI+TDYCMPGMTGY+LLKR K S K+VPVV+MSSEN+P+R+ CLEEGA+
Sbjct: 76 ---KVNLIITDYCMPGMTGYELLKRXKQQSSILKEVPVVIMSSENIPTRINKCLEEGAQM 132
Query: 168 FLLKPVRLSDLEKLQPRL 185
F+LKP++ SD++KL+ L
Sbjct: 133 FMLKPLKQSDVKKLRCYL 150
>gi|302781008|ref|XP_002972278.1| hypothetical protein SELMODRAFT_97144 [Selaginella moellendorffii]
gi|300159745|gb|EFJ26364.1| hypothetical protein SELMODRAFT_97144 [Selaginella moellendorffii]
Length = 293
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/147 (51%), Positives = 105/147 (71%), Gaps = 10/147 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL--- 105
HVLAVDDS +DRK++E LL+ SSY+VT VDS +ALE LG++ + N S L
Sbjct: 8 IHVLAVDDSHLDRKVVERLLKNSSYKVTTVDSAFRALEVLGIVGSAPVVINVSSHLLVHF 67
Query: 106 ------STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVT 158
+ ++NLI+TDYCMP MTGYDLLK++K SS K++PVV+MSSENV R+T
Sbjct: 68 LCFLWLLLLLQAIKINLIITDYCMPEMTGYDLLKKVKESSALKEIPVVIMSSENVAERIT 127
Query: 159 MCLEEGAEEFLLKPVRLSDLEKLQPRL 185
MC+ EGA+EF+LKP+R++D+++L+ +
Sbjct: 128 MCMAEGAKEFILKPLRVADVKRLRSHI 154
>gi|357477303|ref|XP_003608937.1| Two-component response regulator ARR5 [Medicago truncatula]
gi|355509992|gb|AES91134.1| Two-component response regulator ARR5 [Medicago truncatula]
Length = 214
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 77/141 (54%), Positives = 109/141 (77%), Gaps = 11/141 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDSL+DRK++E LL++SS +VT V+S +AL++LGL + EN+ A +
Sbjct: 26 LHVLAVDDSLVDRKVIERLLKISSCKVTVVESARRALQFLGL--DGENSDVAFDAV---- 79
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+VNLIMTDY MPGMTGY+LLK++K SS ++++PVV+MSSENV +R+ CLEEGAE+
Sbjct: 80 ----KVNLIMTDYSMPGMTGYELLKKIKESSVFREIPVVIMSSENVLTRIDRCLEEGAED 135
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
FLLKPV+LSD+ +L+ +++
Sbjct: 136 FLLKPVKLSDVRRLKDFIMRG 156
>gi|296090340|emb|CBI40159.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 80/139 (57%), Positives = 102/139 (73%), Gaps = 12/139 (8%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK +E LL+ SS+QVT V S KALE+LGL + N +
Sbjct: 9 FHVLAVDDSIIDRKWIEKLLKTSSFQVTVVGSVSKALEFLGLQKAEQRNHH--------- 59
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ ++VNLI+T Y MPGMTGYDLLK++K S S K +PVV+MSSEN+PSR+ CL EG ++
Sbjct: 60 -QGTKVNLIITYYSMPGMTGYDLLKKIKESTSLKGIPVVIMSSENIPSRINRCL-EGEKD 117
Query: 168 FLLKPVRLSDLEKLQPRLL 186
F LKPV+LSD+ KL+P LL
Sbjct: 118 FFLKPVQLSDVNKLRPHLL 136
>gi|13173408|gb|AAK14395.1|AF339732_1 response regulator protein [Dianthus caryophyllus]
Length = 264
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/144 (53%), Positives = 110/144 (76%), Gaps = 11/144 (7%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDSLIDRK++E LL+ +S +VT VDSG +ALE+LGL + E ++
Sbjct: 36 HVLAVDDSLIDRKVIERLLKTTSCKVTVVDSGMRALEFLGL--DAEQRTSVV-------- 85
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ +++LI+TDYCMPGMTGY+LLK++K SS +K+ PVV+MSSENV +R+ CLEEGAE+F
Sbjct: 86 DGLKIDLIITDYCMPGMTGYELLKKIKESSTFKETPVVIMSSENVIARIDRCLEEGAEDF 145
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRS 192
+LKPV+LSD+++L+ + ++S
Sbjct: 146 ILKPVKLSDVKRLRDYMTNKYDKS 169
>gi|359807455|ref|NP_001241393.1| uncharacterized protein LOC100778707 [Glycine max]
gi|255637322|gb|ACU18991.1| unknown [Glycine max]
Length = 146
Score = 151 bits (381), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 104/138 (75%), Gaps = 11/138 (7%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDD+LIDRK++E LLR SS +VT ++G +ALE LGL +N N
Sbjct: 18 HVLAVDDNLIDRKLVEKLLRNSSCKVTTAENGPRALELLGLTSGGQNTMNG--------- 68
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
S+VN+++TDYCMPGMTGY+LLK++K SS K+VPVV+MSSEN+P+R+ CLEEGA+ F
Sbjct: 69 -RSKVNMVITDYCMPGMTGYELLKKIKESSVTKEVPVVIMSSENIPTRINKCLEEGAQMF 127
Query: 169 LLKPVRLSDLEKLQPRLL 186
+LKP++ SD++KL +L+
Sbjct: 128 ILKPLKQSDVKKLTCQLM 145
>gi|225457164|ref|XP_002283787.1| PREDICTED: two-component response regulator ARR5-like [Vitis
vinifera]
Length = 222
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 78/155 (50%), Positives = 113/155 (72%), Gaps = 16/155 (10%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS +DRK++E LL++SS +VT V+SG +AL++LGL D EN S
Sbjct: 29 LHVLAVDDSHVDRKVIERLLKISSCKVTAVESGTRALQFLGL-DGEEN---------SVG 78
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ +VNLIMTDY MPGMTGY+LLK++K S +++ +PVV+MSSEN+ +R+ CLEEGAEE
Sbjct: 79 FDGLKVNLIMTDYSMPGMTGYELLKKIKESKAFRKIPVVIMSSENILTRIDRCLEEGAEE 138
Query: 168 FLLKPVRLSDLEKLQPRLLK-----SPNRSCGNNE 197
F++KPV+L+D+ +L+ +++ NR GN++
Sbjct: 139 FIVKPVKLADVRRLRDFIMRGEEEGEENRKKGNHK 173
>gi|297733851|emb|CBI15098.3| unnamed protein product [Vitis vinifera]
Length = 296
Score = 150 bits (379), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 79/160 (49%), Positives = 115/160 (71%), Gaps = 16/160 (10%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DRK++E LL++SS +VT V+SG +AL++LGL D EN S
Sbjct: 104 HVLAVDDSHVDRKVIERLLKISSCKVTAVESGTRALQFLGL-DGEEN---------SVGF 153
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ +VNLIMTDY MPGMTGY+LLK++K S +++ +PVV+MSSEN+ +R+ CLEEGAEEF
Sbjct: 154 DGLKVNLIMTDYSMPGMTGYELLKKIKESKAFRKIPVVIMSSENILTRIDRCLEEGAEEF 213
Query: 169 LLKPVRLSDLEKLQPRLLK-----SPNRSCGNNEDSDNDN 203
++KPV+L+D+ +L+ +++ NR GN++ D+
Sbjct: 214 IVKPVKLADVRRLRDFIMRGEEEGEENRKKGNHKRKLQDD 253
>gi|449440724|ref|XP_004138134.1| PREDICTED: two-component response regulator ARR5-like [Cucumis
sativus]
gi|449477360|ref|XP_004155001.1| PREDICTED: two-component response regulator ARR5-like [Cucumis
sativus]
Length = 227
Score = 150 bits (379), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 81/173 (46%), Positives = 117/173 (67%), Gaps = 11/173 (6%)
Query: 19 LENIPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCV 78
+ +P R L + KQ + HVLAVDDS +DRK++E LL+ SS +VT V
Sbjct: 1 MATVPDLFRRNGLVGFSDESKQ-RSSGSTQLHVLAVDDSFVDRKVIERLLKSSSCEVTVV 59
Query: 79 DSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS 138
+SG AL+YLGL + E NS S L +VNLI+TDY MP MTGY+LLK++K S
Sbjct: 60 ESGRSALQYLGL--DGETNSVQFSSAL-------KVNLIITDYSMPEMTGYELLKKIKES 110
Query: 139 S-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPN 190
S ++++PVV+MSSEN+ +R+ CL+EGAEEF++KPV+LSD+++L+ +++ N
Sbjct: 111 SAFREIPVVIMSSENIMARIDSCLKEGAEEFIVKPVKLSDVKRLKDFIMEGEN 163
>gi|296090341|emb|CBI40160.3| unnamed protein product [Vitis vinifera]
Length = 123
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 75/124 (60%), Positives = 93/124 (75%), Gaps = 16/124 (12%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSLIDRK +E LL+ SS+QVT +DS KALE+LG +
Sbjct: 9 FHVLAVDDSLIDRKWIEKLLKTSSFQVTVLDSVSKALEFLG---------------VQEA 53
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++E +VNLI+TDY MPGMTGYDLL+++K S S KD+PVV+MSSEN+PSR+T CLEEGAE+
Sbjct: 54 EQERKVNLIITDYSMPGMTGYDLLRKIKESTSLKDIPVVIMSSENIPSRITRCLEEGAED 113
Query: 168 FLLK 171
F LK
Sbjct: 114 FFLK 117
>gi|224144996|ref|XP_002325489.1| type-a response regulator [Populus trichocarpa]
gi|222862364|gb|EEE99870.1| type-a response regulator [Populus trichocarpa]
Length = 154
Score = 150 bits (378), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 107/142 (75%), Gaps = 18/142 (12%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID----NLENNSNASPSTL 105
HVLAVDDSL+DRK++E LL+ SS +VT ++G +ALEYLGL D +LE+N
Sbjct: 22 HVLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYLGLGDEKRTSLEDNV------- 74
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEG 164
S+VNLI+TDYCMPGMTGY+LLK++K SS K++PVV+MSSEN+P+R+ CLEEG
Sbjct: 75 ------SKVNLIITDYCMPGMTGYELLKKIKESSMLKEIPVVIMSSENIPTRINKCLEEG 128
Query: 165 AEEFLLKPVRLSDLEKLQPRLL 186
A+ F+LKP++ SD+ KL+ L+
Sbjct: 129 AQMFMLKPLKQSDVVKLRCNLM 150
>gi|255559713|ref|XP_002520876.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223540007|gb|EEF41585.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 155
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 108/142 (76%), Gaps = 18/142 (12%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDN----LENNSNASPSTL 105
HVLAVDD+LIDRK++E LL+ S +VT ++G +ALEYLGL D+ LENN
Sbjct: 23 HVLAVDDNLIDRKLVEKLLKNSCCKVTTAENGLRALEYLGLGDDDRNCLENNV------- 75
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEG 164
S+VNLI+TDYCMPGMTGY+LLK++K SS K+VPVV++SSEN+P+R+ CLEEG
Sbjct: 76 ------SKVNLIITDYCMPGMTGYELLKKIKESSIMKEVPVVIVSSENIPTRINKCLEEG 129
Query: 165 AEEFLLKPVRLSDLEKLQPRLL 186
A+ F+LKP++LSD++KL+ ++
Sbjct: 130 AQMFMLKPLKLSDVKKLRCDIM 151
>gi|116788845|gb|ABK25022.1| unknown [Picea sitchensis]
Length = 208
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 84/196 (42%), Positives = 124/196 (63%), Gaps = 27/196 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q + HVLAVDD LI+RK++E LL+ + ++VT VDS ++ALE LG + E ++ A+ +
Sbjct: 29 QCDEMHVLAVDDCLIERKVIEKLLKTNFFKVTTVDSAERALEVLGFHE--EQSTCAASNA 86
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEE 163
+VN+I+TDYCMPGMTGYDLLK+++ K++PVV++SSENVP R+T CL
Sbjct: 87 F-------KVNMIITDYCMPGMTGYDLLKKVQETKCLKEIPVVIISSENVPQRITSCLAG 139
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRKA 223
GA++F++KP++L+D+ KL+ +K P + TS SS+ SKRK
Sbjct: 140 GAKDFIIKPLKLADVTKLKGH-IKPPK------------DVVSTSANASSSGPVSSKRKI 186
Query: 224 LSAEA----PERRPKM 235
S A ERRP++
Sbjct: 187 SSGRARGKMSERRPRV 202
>gi|18410485|ref|NP_567037.1| two-component response regulator ARR17 [Arabidopsis thaliana]
gi|51316089|sp|Q9FPR6.1|ARR17_ARATH RecName: Full=Two-component response regulator ARR17
gi|11870071|gb|AAG40613.1|AF305722_1 response regulator 17 [Arabidopsis thaliana]
gi|332645994|gb|AEE79515.1| two-component response regulator ARR17 [Arabidopsis thaliana]
Length = 153
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 75/143 (52%), Positives = 105/143 (73%), Gaps = 10/143 (6%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
+E HVLAVDD+LIDRK++E +L++SS +VT ++G +ALEYLGL D P
Sbjct: 16 MEEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGD---------PQQ 66
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
+ +VNLI+TDYCMPGMTG++LLK++K SS K+VPVV++SSEN+P+R+ CL
Sbjct: 67 TDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLAS 126
Query: 164 GAEEFLLKPVRLSDLEKLQPRLL 186
GA+ F+ KP++LSD+EKL+ LL
Sbjct: 127 GAQMFMQKPLKLSDVEKLKCHLL 149
>gi|309951240|emb|CBX43990.1| putative A-type response regulator 8 [Populus x canadensis]
Length = 154
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 79/142 (55%), Positives = 106/142 (74%), Gaps = 18/142 (12%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID----NLENNSNASPSTL 105
HVLAVDDSL+DRK++E LL+ SS +VT ++G +ALEYLGL D +LE+N
Sbjct: 22 HVLAVDDSLVDRKLVERLLKNSSCKVTTAENGLRALEYLGLGDEKRTSLEDNV------- 74
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEG 164
S+VNLI+TDYCMPGMTGY+LLK++K SS K +PVV+MSSEN+P+R+ CLEEG
Sbjct: 75 ------SKVNLIITDYCMPGMTGYELLKKIKESSMLKKIPVVIMSSENIPTRINKCLEEG 128
Query: 165 AEEFLLKPVRLSDLEKLQPRLL 186
A+ F+LKP++ SD+ KL+ L+
Sbjct: 129 AQMFMLKPLKQSDVVKLRCNLM 150
>gi|297816962|ref|XP_002876364.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322202|gb|EFH52623.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 149
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/143 (53%), Positives = 104/143 (72%), Gaps = 14/143 (9%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
+E HVLAVDD+LIDRK LE +L++SS +VT ++G +ALEYLGL D + N
Sbjct: 16 MEEELHVLAVDDNLIDRKFLERILKISSCKVTTAENGLRALEYLGLGDPQQTNV------ 69
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
+VNLI+TDYCMPGMTG++LLK++K SS K+VPVV++SSEN+P+R+ CL
Sbjct: 70 -------MKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRINKCLAS 122
Query: 164 GAEEFLLKPVRLSDLEKLQPRLL 186
GA+ F+ KP++LSD+EKL+ LL
Sbjct: 123 GAQMFMQKPLKLSDVEKLKCHLL 145
>gi|15226732|ref|NP_181599.1| two-component response regulator ARR16 [Arabidopsis thaliana]
gi|51316112|sp|Q9SHC2.1|ARR16_ARATH RecName: Full=Two-component response regulator ARR16
gi|11870068|gb|AAG40612.1|AF305721_1 response regulator 16 [Arabidopsis thaliana]
gi|10443140|emb|CAC10396.1| putative type A response regulator [Arabidopsis thaliana]
gi|194708806|gb|ACF88487.1| At2g40670 [Arabidopsis thaliana]
gi|330254768|gb|AEC09862.1| two-component response regulator ARR16 [Arabidopsis thaliana]
Length = 164
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/157 (47%), Positives = 108/157 (68%), Gaps = 8/157 (5%)
Query: 31 LEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL 90
L D+ + E HVLAVDD+LIDRK++E LL++S +VT ++ +ALEYLGL
Sbjct: 11 LMDVVAYDHHLHHGHDEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGL 70
Query: 91 IDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMS 149
D N + T + K V+LI+TDYCMPGMTG++LLK++K SS ++VPVV+MS
Sbjct: 71 GDQ---NQHIDALTCNVMK----VSLIITDYCMPGMTGFELLKKVKESSNLREVPVVIMS 123
Query: 150 SENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLL 186
SEN+P+R+ CL GA+ F+ KP++L+D+EKL+ L+
Sbjct: 124 SENIPTRINKCLASGAQMFMQKPLKLADVEKLKCHLM 160
>gi|125658123|gb|ABN48988.1| type A response regulator RR1 [Phaseolus vulgaris]
Length = 227
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 116/162 (71%), Gaps = 11/162 (6%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDSL+DRK++E LL++S+ +VT VDSG +AL++LGL D S + S K
Sbjct: 21 HVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGL-DEQRRTSESDGFVPSLK- 78
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V+LI+TDYCMP MTGY+LLK++K SS ++++PVV+MSSEN+ R+ CLEEGAE+F
Sbjct: 79 ----VDLIITDYCMPEMTGYELLKKIKESSMFREIPVVIMSSENILPRIDRCLEEGAEDF 134
Query: 169 LLKPVRLSDLEKLQ----PRLLKSPNRSCGNNEDSDNDNKNE 206
++KPV+LSD+++L+ R +K + G+ + +N K E
Sbjct: 135 IVKPVKLSDVKRLKGYMTTREVKVGSHDRGSGVEINNKRKLE 176
>gi|168002910|ref|XP_001754156.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694710|gb|EDQ81057.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 134
Score = 147 bits (372), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/140 (53%), Positives = 107/140 (76%), Gaps = 10/140 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+HVLAVDDS ID++++E LL+ SSY+VT V+S +ALE LGL S++SPS++
Sbjct: 2 YHVLAVDDSRIDQRVIEKLLKTSSYKVTTVNSALRALELLGL-------SDSSPSSIKVP 54
Query: 109 K-EESRVNLIMTDYCMPGMTGYDLLKRLKV--SSWKDVPVVVMSSENVPSRVTMCLEEGA 165
++ +NLIMTDYCMP MTGYDLLKR+K S+ K++PVVVMSSEN +R+ CL EGA
Sbjct: 55 LLQKLDINLIMTDYCMPEMTGYDLLKRVKADTSALKEIPVVVMSSENDSNRIERCLAEGA 114
Query: 166 EEFLLKPVRLSDLEKLQPRL 185
EEF++KPV+++D+++L+ +
Sbjct: 115 EEFIIKPVQMADVKRLRGHI 134
>gi|297824003|ref|XP_002879884.1| hypothetical protein ARALYDRAFT_483126 [Arabidopsis lyrata subsp.
lyrata]
gi|297325723|gb|EFH56143.1| hypothetical protein ARALYDRAFT_483126 [Arabidopsis lyrata subsp.
lyrata]
Length = 163
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 75/146 (51%), Positives = 105/146 (71%), Gaps = 8/146 (5%)
Query: 42 QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
E HVLAVDD+LIDRK++E LL++SS +VT ++ +ALEYLGL D N +
Sbjct: 21 HHGHDEELHVLAVDDNLIDRKLVERLLKISSCKVTTAENAIRALEYLGLGDQ---NQHID 77
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMC 160
T + K VNLI+TDYCMPGMTG++LLK++K SS +++PVV+MSSEN+P+R+ C
Sbjct: 78 ALTCNVMK----VNLIITDYCMPGMTGFELLKKVKESSNLRELPVVIMSSENIPTRINKC 133
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRLL 186
L GA+ F+ KP++LSD+EKL+ L+
Sbjct: 134 LASGAQMFMQKPLKLSDVEKLKCHLM 159
>gi|15222035|ref|NP_177627.1| two-component response regulator ARR15 [Arabidopsis thaliana]
gi|51315904|sp|Q7G8V2.1|ARR15_ARATH RecName: Full=Two-component response regulator ARR15
gi|5882734|gb|AAD55287.1|AC008263_18 Similar to gb|AB008490 response regulator 7 (ARR7) from Arabidopsis
thaliana. EST gb|AA042183 comes from this gene
[Arabidopsis thaliana]
gi|11870065|gb|AAG40611.1|AF305720_1 response regulator 15 [Arabidopsis thaliana]
gi|12323888|gb|AAG51914.1|AC013258_8 putative response regulator (two component phosphotransfer
signaling); 70657-71777 [Arabidopsis thaliana]
gi|332197523|gb|AEE35644.1| two-component response regulator ARR15 [Arabidopsis thaliana]
Length = 206
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 71/141 (50%), Positives = 106/141 (75%), Gaps = 11/141 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS +DRK++E LL++S+ +VT V+SG +AL+YLGL + N S
Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGL-----DGDNGSSGL---- 68
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++ +VNLI+TDY MPG+TGY+LLK++K SS +++PVV+MSSEN+ R+ C+ EGAEE
Sbjct: 69 -KDLKVNLIVTDYSMPGLTGYELLKKIKESSALREIPVVIMSSENIQPRIEQCMIEGAEE 127
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
FLLKPV+L+D+++L+ +++
Sbjct: 128 FLLKPVKLADVKRLKELIMRG 148
>gi|334184846|ref|NP_001189722.1| two-component response regulator ARR16 [Arabidopsis thaliana]
gi|330254769|gb|AEC09863.1| two-component response regulator ARR16 [Arabidopsis thaliana]
Length = 165
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 74/158 (46%), Positives = 108/158 (68%), Gaps = 9/158 (5%)
Query: 31 LEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL 90
L D+ + E HVLAVDD+LIDRK++E LL++S +VT ++ +ALEYLGL
Sbjct: 11 LMDVVAYDHHLHHGHDEELHVLAVDDNLIDRKLVERLLKISCCKVTTAENALRALEYLGL 70
Query: 91 IDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK--VSSWKDVPVVVM 148
D N + T + K V+LI+TDYCMPGMTG++LLK++K S+ ++VPVV+M
Sbjct: 71 GDQ---NQHIDALTCNVMK----VSLIITDYCMPGMTGFELLKKVKQESSNLREVPVVIM 123
Query: 149 SSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLL 186
SSEN+P+R+ CL GA+ F+ KP++L+D+EKL+ L+
Sbjct: 124 SSENIPTRINKCLASGAQMFMQKPLKLADVEKLKCHLM 161
>gi|297842233|ref|XP_002888998.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
gi|297334839|gb|EFH65257.1| hypothetical protein ARALYDRAFT_316423 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 147 bits (370), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 71/150 (47%), Positives = 110/150 (73%), Gaps = 11/150 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS +DRK++E LL++S+ +VT V+SG +AL+YLGL + + S L
Sbjct: 18 LHVLAVDDSFVDRKVIERLLKISACKVTTVESGTRALQYLGL------DGDHGSSGL--- 68
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++ +VNLI+TDY MPG+TGY+LLK++K SS ++++PVV+MSSEN+ R+ C+ EGAE+
Sbjct: 69 -KDLKVNLIVTDYSMPGLTGYELLKKIKESSAFREIPVVIMSSENIQPRIEQCMIEGAED 127
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGNNE 197
FLLKPV+L+D+++L+ +++ G +
Sbjct: 128 FLLKPVKLADVKRLKELIMRGGEAGEGKTK 157
>gi|357496037|ref|XP_003618307.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355493322|gb|AES74525.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 207
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 108/194 (55%), Gaps = 64/194 (32%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDR ++E LL+ SS+ VT +DS KAL++LGL++++ + +
Sbjct: 11 FHVLAVDDSIIDRMLIERLLKTSSFHVTTMDSASKALKFLGLVEDVASEVHG-------- 62
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-------------------------------- 136
+ VNLI+ DYCMPGMTGYDLL+++K
Sbjct: 63 --DVDVNLIIADYCMPGMTGYDLLRKIKGARKVNLGRLKLKIATKSKLRRLGRVVFLGAK 120
Query: 137 ---------VSSWKDVPVVVMSSENVPSRVT-------------MCLEEGAEEFLLKPVR 174
+ ++KD+PVV+MSSENV SR++ C EEGAEEF LKPV+
Sbjct: 121 ITTLGNLEGIQTFKDIPVVIMSSENVSSRISSLTYYGLIVCNCIKCFEEGAEEFFLKPVQ 180
Query: 175 LSDLEKLQPRLLKS 188
SD+ KL+P LLKS
Sbjct: 181 QSDVNKLKPHLLKS 194
>gi|224146583|ref|XP_002326060.1| type-a response regulator [Populus trichocarpa]
gi|222862935|gb|EEF00442.1| type-a response regulator [Populus trichocarpa]
Length = 151
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/142 (54%), Positives = 104/142 (73%), Gaps = 11/142 (7%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDSLIDRK++E LL S+ +VT ++G +ALEYLGL D PS
Sbjct: 20 HVLAVDDSLIDRKVIERLLINSTCRVTTAENGKRALEYLGLADG------QHPS----HS 69
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
++ +VN+I+TDY MPGMTGY+LLKR+K S + K++PVVV+SSEN+P+R+ C+E GA+EF
Sbjct: 70 QDLKVNMIITDYSMPGMTGYELLKRIKESPTMKEIPVVVVSSENIPTRINQCMEGGAQEF 129
Query: 169 LLKPVRLSDLEKLQPRLLKSPN 190
LLKP++LSD KL+ + K N
Sbjct: 130 LLKPLQLSDATKLRCHIKKLNN 151
>gi|356497802|ref|XP_003517746.1| PREDICTED: two-component response regulator ARR3-like [Glycine max]
Length = 244
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 77/151 (50%), Positives = 110/151 (72%), Gaps = 12/151 (7%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDSL+DRK++E LL++S+ +VT VDSG +AL++LGL D S + K
Sbjct: 21 HVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGL-DEQRRTSESDGFVPDLK- 78
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V+LI+TDYCMP MTGY+LLK++K S+ ++++PVV+MSSEN+ R+ CLEEGAE+F
Sbjct: 79 ----VDLIITDYCMPEMTGYELLKKIKESTMFREIPVVIMSSENILPRIDRCLEEGAEDF 134
Query: 169 LLKPVRLSDLEKLQPRL-----LKSPNRSCG 194
++KPV+LSD+++L+ L +K RS G
Sbjct: 135 IVKPVKLSDVKRLKGYLTPKEVIKVDRRSDG 165
>gi|356501005|ref|XP_003519320.1| PREDICTED: two-component response regulator ARR3-like [Glycine max]
Length = 240
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 104/134 (77%), Gaps = 7/134 (5%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDSL+DRK++E LL++S+ +VT VDSG +AL++LGL D S + K
Sbjct: 21 HVLAVDDSLVDRKVIERLLKISACKVTAVDSGIRALQFLGL-DEQRRTSESDGFVPDLK- 78
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V+LI+TDYCMP MTGY+LLK++K S+ ++++PVV+MSSEN+ R+ CLEEGAE+F
Sbjct: 79 ----VDLIITDYCMPEMTGYELLKKIKESTMFREIPVVIMSSENILPRIDRCLEEGAEDF 134
Query: 169 LLKPVRLSDLEKLQ 182
++KPV+LSD+++L+
Sbjct: 135 IVKPVKLSDVKRLK 148
>gi|357144070|ref|XP_003573159.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 135
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 76/139 (54%), Positives = 94/139 (67%), Gaps = 21/139 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDSL+DR I+ LLR S YQVT VDSG +ALE L L
Sbjct: 7 LHVLAVDDSLVDRAIISRLLRSSKYQVTTVDSGKRALEVLSL------------------ 48
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
E V++I+TDYCMP MTGY+LLKR+K + +++PVV+MSSEN P+R+ CLEEGAEE
Sbjct: 49 --EREVHMIITDYCMPEMTGYELLKRVKETAELREIPVVIMSSENSPARIRRCLEEGAEE 106
Query: 168 FLLKPVRLSDLEKLQPRLL 186
FL+KPVR SD+ +L LL
Sbjct: 107 FLIKPVRPSDVSRLCSLLL 125
>gi|357162610|ref|XP_003579464.1| PREDICTED: two-component response regulator ARR5-like [Brachypodium
distachyon]
Length = 163
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 101/153 (66%), Gaps = 19/153 (12%)
Query: 34 IPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDN 93
+P + + HVLAVDDS++DR ++ +LR S Y+VT V+S +ALE LGL
Sbjct: 28 VPVMAAAADEVVVQELHVLAVDDSVVDRAVIAKILRSSKYRVTTVESATRALELLGL--G 85
Query: 94 LENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSEN 152
L N VN+I+TDY MPGMTGY+LLKR+K SS K++PVV+MSSEN
Sbjct: 86 LITN----------------VNMIITDYWMPGMTGYELLKRVKESSELKEIPVVIMSSEN 129
Query: 153 VPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRL 185
VP+R+ CLEEGAE+FLLKPVR SD+ +L R+
Sbjct: 130 VPNRINRCLEEGAEDFLLKPVRPSDVSRLCSRI 162
>gi|242067106|ref|XP_002454842.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
gi|241934673|gb|EES07818.1| hypothetical protein SORBIDRAFT_04g038320 [Sorghum bicolor]
Length = 134
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/143 (51%), Positives = 99/143 (69%), Gaps = 21/143 (14%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS++DR ++ LLR S Y+VT VDSG +ALE L L D+
Sbjct: 12 HVLAVDDSIVDRAVISRLLRSSKYRVTTVDSGKRALEVLSLDDS---------------- 55
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V++I+TDYCMP M+GY+LLKR+K S+ +++PVV+MSSEN P+R+ CLEEGAEEF
Sbjct: 56 ----VHMIITDYCMPEMSGYELLKRVKESAELREIPVVLMSSENSPTRIRRCLEEGAEEF 111
Query: 169 LLKPVRLSDLEKLQPRLLKSPNR 191
L+KPVR SD+ +L RL+ + R
Sbjct: 112 LIKPVRASDVSRLCSRLVSTCRR 134
>gi|326531500|dbj|BAJ97754.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 173
Score = 144 bits (363), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 77/138 (55%), Positives = 98/138 (71%), Gaps = 19/138 (13%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS++DR ++ +LR S Y+VT VDS +ALE LGL L T
Sbjct: 53 LHVLAVDDSVVDRAVIAKILRSSKYRVTTVDSATRALELLGL-------------GLITD 99
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
VN+I+TDY MPGMTGY+LLKR+K SS +++PVV+MSSENVP+R+T CLEEGAE+
Sbjct: 100 -----VNMIITDYWMPGMTGYELLKRVKESSELREIPVVIMSSENVPNRITRCLEEGAED 154
Query: 168 FLLKPVRLSDLEKLQPRL 185
FLLKPVR SD+ +L R+
Sbjct: 155 FLLKPVRPSDVSRLCNRI 172
>gi|33330866|gb|AAQ10676.1| type-A response regulator [Catharanthus roseus]
Length = 154
Score = 143 bits (361), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 76/146 (52%), Positives = 106/146 (72%), Gaps = 10/146 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS-- 106
HVLAVDD++IDRKI+E LL SS +VT ++G +ALEYLG NL +S + L
Sbjct: 9 LHVLAVDDNIIDRKIVEKLLISSSCKVTTAENGIRALEYLG---NLGVHSESQTPALHQD 65
Query: 107 ----TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCL 161
T + +VNLI+TDYC P MTGY+LLK++K SS KD+PV+VMSSEN+P+R+ CL
Sbjct: 66 DAIPTAAGDLKVNLIITDYCKPEMTGYELLKKIKESSILKDIPVIVMSSENIPTRIHKCL 125
Query: 162 EEGAEEFLLKPVRLSDLEKLQPRLLK 187
EEGA+ F+LKP++ SD+ +L+ +L++
Sbjct: 126 EEGAQMFMLKPLKHSDVTRLRCQLMQ 151
>gi|168002238|ref|XP_001753821.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695228|gb|EDQ81573.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 124
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/135 (54%), Positives = 102/135 (75%), Gaps = 13/135 (9%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+HVLAVDDS ID++++E LL+ SSY+VT V+S +AL+ LGL + S S ST+
Sbjct: 1 YHVLAVDDSSIDQRVIERLLKTSSYRVTTVNSAVRALDVLGL--------SESRSASSTR 52
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKV--SSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+ +NLIMTDYCMP MTGYDLLKR+K S+ K++PVV+MSSEN +R+ CL EGAE
Sbjct: 53 LD---INLIMTDYCMPEMTGYDLLKRVKAQTSALKEIPVVLMSSENDSNRIERCLAEGAE 109
Query: 167 EFLLKPVRLSDLEKL 181
EF++KPV+++D+++L
Sbjct: 110 EFIIKPVKMADVKRL 124
>gi|118489969|gb|ABK96781.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 248
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 121/164 (73%), Gaps = 6/164 (3%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALE---YLGLIDNLENNSNAS 101
++E HVLAVDDS +DRK++E LL++SS +VT VDSG AL+ L + +++S++S
Sbjct: 30 EEEEVHVLAVDDSFVDRKVIERLLKISSCKVTAVDSGWGALKLLGLLDDDEEDKSSSSSS 89
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMC 160
S+ S E +V+LI+TDYCMPGMTGY+LLK++K SS++++PVV+MSSENV +R+ C
Sbjct: 90 SSSSSAGFEGLKVDLIITDYCMPGMTGYELLKKIKESSSFREIPVVIMSSENVMARIDRC 149
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNK 204
LEEGAEEF+ KPV+LSD+++L+ + + R + + S N NK
Sbjct: 150 LEEGAEEFIAKPVKLSDVKRLRDYYMAT--REIRSVQSSSNVNK 191
>gi|90265238|emb|CAH67773.1| H0322F07.10 [Oryza sativa Indica Group]
gi|90399191|emb|CAH68178.1| H0403D02.6 [Oryza sativa Indica Group]
gi|125550193|gb|EAY96015.1| hypothetical protein OsI_17886 [Oryza sativa Indica Group]
Length = 170
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 99/145 (68%), Gaps = 23/145 (15%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL--GLIDNLENNSNAS 101
+ Q HVLAVDDS +DR ++ +LR S Y+VT V+S +ALE L GL+ N
Sbjct: 45 EAQSEMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCLGLVPN-------- 96
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMC 160
VN+I+TDY MPGMTGY+LLKR+K SS K++PVV+MSSENVP+R++ C
Sbjct: 97 ------------VNMIITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRC 144
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRL 185
LEEGAE+FLLKPVR SD+ +L R+
Sbjct: 145 LEEGAEDFLLKPVRPSDVSRLCSRI 169
>gi|115461262|ref|NP_001054231.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|32488053|emb|CAE03227.1| OSJNBa0018M05.2 [Oryza sativa Japonica Group]
gi|70663953|emb|CAJ14992.1| OSJNBb0004A17.17 [Oryza sativa Japonica Group]
gi|71273485|emb|CAI79410.1| Type A response regulator 6 [Oryza sativa Indica Group]
gi|87116376|dbj|BAE79347.1| typeA response regulator 6 [Oryza sativa Japonica Group]
gi|113565802|dbj|BAF16145.1| Os04g0673300 [Oryza sativa Japonica Group]
gi|118790854|tpd|FAA00267.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125592032|gb|EAZ32382.1| hypothetical protein OsJ_16592 [Oryza sativa Japonica Group]
gi|215765394|dbj|BAG87091.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 170
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 99/145 (68%), Gaps = 23/145 (15%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL--GLIDNLENNSNAS 101
+ Q HVLAVDDS +DR ++ +LR S Y+VT V+S +ALE L GL+ N
Sbjct: 45 EAQSEMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCLGLVPN-------- 96
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMC 160
VN+I+TDY MPGMTGY+LLKR+K SS K++PVV+MSSENVP+R++ C
Sbjct: 97 ------------VNMIITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRC 144
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRL 185
LEEGAE+FLLKPVR SD+ +L R+
Sbjct: 145 LEEGAEDFLLKPVRPSDVSRLCSRI 169
>gi|109631204|gb|ABG35778.1| SRR201 [Striga asiatica]
Length = 223
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 111/147 (75%), Gaps = 12/147 (8%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDDSL+DRK++E LL++S + V+SG +AL+YLGL + E NS+ +
Sbjct: 21 VLAVDDSLVDRKVIERLLKISRCKAISVESGTRALQYLGL--DEEKNSSGF--------D 70
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +VNLIMTDY MPGMTG++LL+++K S+ K +PVV++SSEN+ +R+ CLEEGAEE+L
Sbjct: 71 DLKVNLIMTDYSMPGMTGFELLQKIKGSAKLKGIPVVILSSENIMTRIDRCLEEGAEEYL 130
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNN 196
+KPV+LSD+E+++ +L+ ++ GN+
Sbjct: 131 VKPVKLSDVERVRDCILRGEGKT-GNS 156
>gi|309951228|emb|CBX43984.1| putative A-type response regulator 2 [Populus x canadensis]
Length = 251
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 124/167 (74%), Gaps = 9/167 (5%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++E HVLAVDDS +DRK++E LL++SS +VT VDSG AL+ LGL+D+ E + ++S S+
Sbjct: 30 EEEEVHVLAVDDSFVDRKVIERLLKISSCKVTAVDSGWGALKLLGLLDDDEEDKSSSSSS 89
Query: 105 LSTKK------EESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRV 157
S+ E +V+LI+TDYCMPGMTGY+LLK++K SS++++PVV+MSSENV +R+
Sbjct: 90 SSSSFSSSAGFEGLKVDLIITDYCMPGMTGYELLKKIKESSSFREIPVVIMSSENVMARI 149
Query: 158 TMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNK 204
CLEEGAEEF+ KPV+LSD+++L+ + + R + + S N NK
Sbjct: 150 DRCLEEGAEEFIAKPVKLSDVKRLRDYYMAT--REIRSVQSSSNVNK 194
>gi|260446968|emb|CBG76250.1| OO_Ba0005L10-OO_Ba0081K17.1 [Oryza officinalis]
Length = 151
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 99/145 (68%), Gaps = 23/145 (15%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL--GLIDNLENNSNAS 101
+ Q HVLAVDDS +DR ++ +LR S Y+VT V+S +ALE L GL+ N
Sbjct: 26 EVQNEMHVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRALELLCLGLVPN-------- 77
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMC 160
VN+I+TDY MPGMTGY+LLKR+K SS K++PVV+MSSENVP+R++ C
Sbjct: 78 ------------VNMIITDYWMPGMTGYELLKRVKESSQLKEIPVVIMSSENVPNRISRC 125
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRL 185
LEEGAE+FLLKPVR SD+ +L R+
Sbjct: 126 LEEGAEDFLLKPVRPSDVSRLCSRI 150
>gi|125600088|gb|EAZ39664.1| hypothetical protein OsJ_24093 [Oryza sativa Japonica Group]
Length = 212
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 96/139 (69%), Gaps = 21/139 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
+V+AVDDS +DR ++ LLR S Y+VT VDSG +ALE LG
Sbjct: 94 YVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILG-------------------- 133
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I+TDY MP MTGYDLLK++K SS K +PVV+MSSENVP+R++ CLEEGAE+F
Sbjct: 134 SEPNVSMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDF 193
Query: 169 LLKPVRLSDLEKLQPRLLK 187
LLKPVR +D+ ++ R+L+
Sbjct: 194 LLKPVRPADISRITSRMLQ 212
>gi|115450024|ref|NP_001048613.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|48716336|dbj|BAD22948.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273479|emb|CAI79407.1| Type A response regulator 3 [Oryza sativa Indica Group]
gi|87116380|dbj|BAE79349.1| typeA response regulator 3 [Oryza sativa Japonica Group]
gi|113538144|dbj|BAF10527.1| Os02g0830200 [Oryza sativa Japonica Group]
gi|118790834|tpd|FAA00265.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125541719|gb|EAY88114.1| hypothetical protein OsI_09552 [Oryza sativa Indica Group]
gi|125584256|gb|EAZ25187.1| hypothetical protein OsJ_08987 [Oryza sativa Japonica Group]
Length = 131
Score = 140 bits (353), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 96/138 (69%), Gaps = 21/138 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS++DR ++ LLR S Y+VT VDSG +ALE L L N
Sbjct: 12 HVLAVDDSIVDRTVISRLLRSSKYRVTTVDSGKRALEVLSLDRN---------------- 55
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V++I+TDYCMP MTG+DLLKR+K S+ K++PVV+MSSEN P+R+ CLEEGAE+F
Sbjct: 56 ----VHMIITDYCMPEMTGFDLLKRVKESAELKEIPVVLMSSENSPTRIRRCLEEGAEDF 111
Query: 169 LLKPVRLSDLEKLQPRLL 186
L+KPVR SD+ +L R++
Sbjct: 112 LIKPVRPSDVSRLCNRVI 129
>gi|168043274|ref|XP_001774110.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674517|gb|EDQ61024.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 131
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 73/139 (52%), Positives = 102/139 (73%), Gaps = 14/139 (10%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+HVL VDDS ID++++E LL SS++VT V+S +ALE LGL S++ PS++
Sbjct: 5 YHVLTVDDSRIDQRVVEKLLMTSSFKVTTVNSALRALELLGL-------SDSCPSSV--- 54
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKV--SSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+ +NLIMTDYCMP MTGYDLLKR+K S+ K++PVVVMSSEN R+ CL EGAE
Sbjct: 55 --KPDINLIMTDYCMPEMTGYDLLKRVKADTSALKEIPVVVMSSENDSIRIERCLAEGAE 112
Query: 167 EFLLKPVRLSDLEKLQPRL 185
EF++KPV+++D+++L+ L
Sbjct: 113 EFIIKPVQMADVKRLRGHL 131
>gi|110617744|gb|ABG78591.1| response regulator [Oryza sativa Japonica Group]
Length = 210
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 96/139 (69%), Gaps = 21/139 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
+V+AVDDS +DR ++ LLR S Y+VT VDSG +ALE LG
Sbjct: 92 YVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILG-------------------- 131
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I+TDY MP MTGYDLLK++K SS K +PVV+MSSENVP+R++ CLEEGAE+F
Sbjct: 132 SEPNVSMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDF 191
Query: 169 LLKPVRLSDLEKLQPRLLK 187
LLKPVR +D+ ++ R+L+
Sbjct: 192 LLKPVRPADISRITSRMLQ 210
>gi|125558184|gb|EAZ03720.1| hypothetical protein OsI_25852 [Oryza sativa Indica Group]
Length = 211
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 96/139 (69%), Gaps = 21/139 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
+V+AVDDS +DR ++ LLR S Y+VT VDSG +ALE LG
Sbjct: 93 YVMAVDDSSVDRAVITALLRRSKYRVTAVDSGKRALEILG-------------------- 132
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I+TDY MP MTGYDLLK++K SS K +PVV+MSSENVP+R++ CLEEGAE+F
Sbjct: 133 SEPNVSMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDF 192
Query: 169 LLKPVRLSDLEKLQPRLLK 187
LLKPVR +D+ ++ R+L+
Sbjct: 193 LLKPVRPADISRITSRMLQ 211
>gi|351724253|ref|NP_001238075.1| uncharacterized protein LOC100527828 [Glycine max]
gi|255633320|gb|ACU17017.1| unknown [Glycine max]
Length = 222
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 82/166 (49%), Positives = 117/166 (70%), Gaps = 11/166 (6%)
Query: 42 QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID--NLENNSN 99
+Q Q E HVLAVDDS +DRK++E+LL+V + +VT VDSG +AL+ LGL+D + + +N
Sbjct: 22 KQNQSEEVHVLAVDDSTVDRKVIEHLLKVLACKVTAVDSGLRALQLLGLLDEQKIPSETN 81
Query: 100 ASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVT 158
+V+LI+TDYCMPGMTGY+LLKR+K SS +K+ PVV+MSSENV R+
Sbjct: 82 GFVGL--------KVDLIITDYCMPGMTGYELLKRIKESSTFKETPVVIMSSENVLPRID 133
Query: 159 MCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNK 204
CLEEGAE+F++KPV+LSD+++L+ + R + E+ + NK
Sbjct: 134 RCLEEGAEDFIVKPVKLSDVKRLKDYMTTKEVRGELSQEEREGINK 179
>gi|226499956|ref|NP_001141563.1| uncharacterized protein LOC100273679 [Zea mays]
gi|194705078|gb|ACF86623.1| unknown [Zea mays]
gi|413937888|gb|AFW72439.1| two-component response regulator ARR3 [Zea mays]
Length = 206
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 96/141 (68%), Gaps = 21/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T HVLAVDDS +DR I+ +LR S ++VT V+SG +ALE LG
Sbjct: 86 TPHVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLG------------------ 127
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAE 166
E V++I+TDYCMP MTGY+LLK++K SS K +PVV+MSSENV +R+ CLEEGAE
Sbjct: 128 --TEPNVSMIITDYCMPEMTGYELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAE 185
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+FL+KPVR SD+ ++ R+L+
Sbjct: 186 DFLVKPVRASDVSRVFSRVLR 206
>gi|162458935|ref|NP_001104854.1| aberrant phyllotaxy1 [Zea mays]
gi|11041692|dbj|BAB17300.1| response regulator [Zea mays]
gi|414586309|tpg|DAA36880.1| TPA: aberrant phyllotaxy1 [Zea mays]
Length = 135
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/139 (52%), Positives = 96/139 (69%), Gaps = 21/139 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S ++VT VDSG +ALE LG
Sbjct: 17 HVLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLG-------------------- 56
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I+TDY MP MTGY+LLK++K SS K++PVV+MSSENVP+R+ CLEEGAE+F
Sbjct: 57 TEPNVSMIITDYWMPEMTGYELLKKIKESSRLKEIPVVIMSSENVPTRINRCLEEGAEDF 116
Query: 169 LLKPVRLSDLEKLQPRLLK 187
LLKPVR SD+ +L R+L+
Sbjct: 117 LLKPVRPSDVSRLCSRVLR 135
>gi|226532303|ref|NP_001149732.1| two-component response regulator ARR3 [Zea mays]
gi|195629894|gb|ACG36588.1| two-component response regulator ARR3 [Zea mays]
gi|195650489|gb|ACG44712.1| two-component response regulator ARR3 [Zea mays]
gi|414884446|tpg|DAA60460.1| TPA: two-component response regulator ARR3 [Zea mays]
Length = 148
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/137 (54%), Positives = 94/137 (68%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
V+AVDDS +DR I+ LLR S Y+VT VDSG +ALE LG
Sbjct: 30 VIAVDDSSVDRAIVTALLRRSKYRVTAVDSGKRALEILG--------------------S 69
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E V++I+TDY MP MTGYDLLK++K SS K +PVV+MSSENVP+R+T CLEEGAE+FL
Sbjct: 70 EPNVSMIITDYWMPEMTGYDLLKKVKESSKLKRIPVVIMSSENVPTRITRCLEEGAEDFL 129
Query: 170 LKPVRLSDLEKLQPRLL 186
LKPVR SD+ ++ R+L
Sbjct: 130 LKPVRPSDISRITTRML 146
>gi|357116980|ref|XP_003560254.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 172
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/139 (53%), Positives = 95/139 (68%), Gaps = 21/139 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
+V+AVDDS +DR ++ LLR S Y+VT VDSG +ALE L
Sbjct: 54 YVMAVDDSSVDRAVITALLRRSKYKVTAVDSGKRALEIL--------------------D 93
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I+TDY MP MTGYDLLK++K SS K +PVV+MSSENVP+R+T CLEEGAEEF
Sbjct: 94 SEPNVSMIITDYWMPEMTGYDLLKKVKESSELKQIPVVIMSSENVPTRITRCLEEGAEEF 153
Query: 169 LLKPVRLSDLEKLQPRLLK 187
LLKPVR SD+ ++ R+L+
Sbjct: 154 LLKPVRPSDISRISTRMLQ 172
>gi|414878657|tpg|DAA55788.1| TPA: hypothetical protein ZEAMMB73_373156 [Zea mays]
Length = 123
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/111 (63%), Positives = 86/111 (77%), Gaps = 7/111 (6%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDSL+DRK++E LL+ SSYQVT VDSG KALE LGL D + ++
Sbjct: 10 FHVLAVDDSLVDRKLIEMLLKTSSYQVTTVDSGSKALELLGLRDASSPSPSS------PD 63
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVT 158
+E VNLI+TDYCMPGMTGYDLLKR+K SS KD+PVV+MSSENVP+R++
Sbjct: 64 HQEIDVNLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARIS 114
>gi|359828774|gb|AEV76989.1| type A response regulator 5, partial [Triticum aestivum]
Length = 119
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 97/139 (69%), Gaps = 21/139 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S ++VT VDSG +ALE LG
Sbjct: 1 HVLAVDDSSVDRAVISGILRSSRFRVTAVDSGKRALELLG-------------------- 40
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I+TDY MP MTGY+LLK++K SS K++PVV+MSSENVP+R++ CLEEGAE+F
Sbjct: 41 SEPNVSMIITDYWMPEMTGYELLKKVKESSKLKEIPVVIMSSENVPTRISRCLEEGAEDF 100
Query: 169 LLKPVRLSDLEKLQPRLLK 187
L+KPVR SD+ +L R+L+
Sbjct: 101 LMKPVRPSDVSRLCSRVLR 119
>gi|357142908|ref|XP_003572733.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 143
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 96/139 (69%), Gaps = 21/139 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS +DR ++ +LR S ++VT VDSG +ALE LGL
Sbjct: 24 LHVLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLGL------------------ 65
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
E V++I+TDY MP MTGY+LLK++K SS K +PVV+MSSENVP+R++ CLEEGAE+
Sbjct: 66 --EPNVSMIITDYWMPEMTGYELLKKVKESSKLKQIPVVIMSSENVPTRISRCLEEGAED 123
Query: 168 FLLKPVRLSDLEKLQPRLL 186
FL+KPVR SD+ ++ R+L
Sbjct: 124 FLVKPVRPSDVSRVFSRVL 142
>gi|242076534|ref|XP_002448203.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
gi|241939386|gb|EES12531.1| hypothetical protein SORBIDRAFT_06g022960 [Sorghum bicolor]
Length = 134
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 96/139 (69%), Gaps = 21/139 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S ++VT VDSG +ALE LG
Sbjct: 16 HVLAVDDSSVDRAVIAGILRSSHFRVTAVDSGKRALELLG-------------------- 55
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I+TDY MP MTGY+LLK++K SS K++PVV+MSSENVP+R+ CLEEGAE+F
Sbjct: 56 TEPNVSMIITDYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVPTRINRCLEEGAEDF 115
Query: 169 LLKPVRLSDLEKLQPRLLK 187
LLKPVR +D+ +L R+L+
Sbjct: 116 LLKPVRPADVSRLCSRVLR 134
>gi|224124816|ref|XP_002319429.1| type-a response regulator [Populus trichocarpa]
gi|222857805|gb|EEE95352.1| type-a response regulator [Populus trichocarpa]
Length = 131
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/138 (52%), Positives = 94/138 (68%), Gaps = 19/138 (13%)
Query: 47 ETFHVLAV---DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPS 103
E HVLAV DD LIDRK +E LL S Y+VT ++ KA+EYLGL D N
Sbjct: 7 EKLHVLAVEAVDDGLIDRKAIERLLINSEYKVTTAENKKKAIEYLGLADGHHTNHG---- 62
Query: 104 TLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEE 163
+ +VNLI+TDYCM GMTGY+LLKR+K ++PVVV+SSEN+P+R+ C+EE
Sbjct: 63 -------DLKVNLIITDYCMRGMTGYELLKRIK-----EIPVVVVSSENIPTRIKQCMEE 110
Query: 164 GAEEFLLKPVRLSDLEKL 181
GA+EFLLKP++LS + KL
Sbjct: 111 GAQEFLLKPLQLSGVTKL 128
>gi|351725357|ref|NP_001235042.1| uncharacterized protein LOC100305926 [Glycine max]
gi|255627003|gb|ACU13846.1| unknown [Glycine max]
Length = 223
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/144 (52%), Positives = 110/144 (76%), Gaps = 11/144 (7%)
Query: 42 QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID--NLENNSN 99
+Q+Q E HVLAVDDS++DRK++E+ L+V + +VT VDSG +AL+ LGL+D + + +N
Sbjct: 22 KQKQSEEVHVLAVDDSIVDRKVIEHSLKVLACKVTAVDSGLRALQLLGLLDEQKIPSETN 81
Query: 100 ASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVT 158
+V+LI+TDYCMPGMTGY+LLK++K SS+K+ PVV+MSSENV R+
Sbjct: 82 GFGGL--------KVDLIITDYCMPGMTGYELLKKIKESSSFKETPVVIMSSENVLPRID 133
Query: 159 MCLEEGAEEFLLKPVRLSDLEKLQ 182
CLEEGAE+F++KPV+LSD+++L+
Sbjct: 134 RCLEEGAEDFIVKPVKLSDVKRLK 157
>gi|115447443|ref|NP_001047501.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|49389191|dbj|BAD26481.1| putative response regulator [Oryza sativa Japonica Group]
gi|87116382|dbj|BAE79350.1| typeA response regulator 11 [Oryza sativa Japonica Group]
gi|113537032|dbj|BAF09415.1| Os02g0631700 [Oryza sativa Japonica Group]
gi|118790875|tpd|FAA00270.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|218191220|gb|EEC73647.1| hypothetical protein OsI_08171 [Oryza sativa Indica Group]
gi|222623289|gb|EEE57421.1| hypothetical protein OsJ_07618 [Oryza sativa Japonica Group]
Length = 147
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 95/138 (68%), Gaps = 21/138 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S ++VT VDSG +ALE LG
Sbjct: 29 HVLAVDDSSVDRAVIAGILRSSRFRVTAVDSGKRALELLG-------------------- 68
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I+TDY MP MTGY+LLK++K SS K +PVV+MSSENVP+R++ CLEEGAE+F
Sbjct: 69 SEPNVSMIITDYWMPEMTGYELLKKVKESSKLKKIPVVIMSSENVPTRISRCLEEGAEDF 128
Query: 169 LLKPVRLSDLEKLQPRLL 186
L+KPVR SD+ +L R+L
Sbjct: 129 LVKPVRPSDVSRLFSRVL 146
>gi|413951288|gb|AFW83937.1| hypothetical protein ZEAMMB73_670408 [Zea mays]
Length = 127
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/117 (62%), Positives = 92/117 (78%), Gaps = 7/117 (5%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK++E LL+ SSYQVT VDSG+KALE LGL DN +++ S+ S+
Sbjct: 10 FHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGLRDNGAEDASPPSSSSSSS 69
Query: 109 ------KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVT 158
+E V+LI+TDYCMPGMTGYDLLKR+K SS KD+PVV+MSSENVP+R++
Sbjct: 70 SSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARIS 126
>gi|195641278|gb|ACG40107.1| two-component response regulator ARR3 [Zea mays]
Length = 136
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 96/141 (68%), Gaps = 21/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T HVLAVDDS +DR I+ +LR S ++VT V+SG +ALE LG
Sbjct: 16 TPHVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLG------------------ 57
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAE 166
E V++I+TDYCMP MTGY+LLK++K SS K +PVV+MSSENV +R+ CLEEGAE
Sbjct: 58 --TEPNVSMIITDYCMPEMTGYELLKKVKESSKLKQIPVVIMSSENVSTRIRRCLEEGAE 115
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+FL+KPVR SD+ ++ R+L+
Sbjct: 116 DFLVKPVRASDVSRVFSRVLR 136
>gi|449526812|ref|XP_004170407.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 194
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/120 (60%), Positives = 94/120 (78%), Gaps = 6/120 (5%)
Query: 75 VTCVDSGDKALEYLGLIDNLE-----NNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGY 129
VT VDSG KALE+LGLI + ++SN+S S+ + +E VNLI+TDYCMPGMTG+
Sbjct: 3 VTTVDSGSKALEFLGLIQEHQPTNFKSSSNSSFSSPNNHHQEVEVNLIITDYCMPGMTGF 62
Query: 130 DLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
DLLK++K S S +++PVV+MSSENVPSR+ CLEEGAEEF LKPVRL D+ KL+P ++K+
Sbjct: 63 DLLKKVKESTSLRNIPVVIMSSENVPSRINRCLEEGAEEFFLKPVRLCDVNKLKPHMMKT 122
>gi|413919924|gb|AFW59856.1| cytokinin response regulator2 [Zea mays]
Length = 159
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 95/139 (68%), Gaps = 23/139 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL--GLIDNLENNSNASPSTLST 107
HVLAVDDS +DR ++ +LR S Y+VT VDS +ALE L GL+ +
Sbjct: 40 HVLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLALGLVPD-------------- 85
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAE 166
VN+I+TDY MPGMTGY+LLK +K SS + +PVV+MSSENVP+R++ CLEEGAE
Sbjct: 86 ------VNMIITDYWMPGMTGYELLKHVKESSALRAIPVVIMSSENVPTRISRCLEEGAE 139
Query: 167 EFLLKPVRLSDLEKLQPRL 185
+FLLKPVR +D+ +L R+
Sbjct: 140 DFLLKPVRPADVSRLCSRI 158
>gi|168022134|ref|XP_001763595.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685088|gb|EDQ71485.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 146
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/147 (49%), Positives = 105/147 (71%), Gaps = 15/147 (10%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSY---QVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
+H+LAVDDS ID+K++E LL+ +SY ++T V+S +AL+YLGL + S ASP
Sbjct: 5 YHILAVDDSRIDQKVIERLLKSASYKGTELTTVNSALRALKYLGL-----SESCASPVMP 59
Query: 106 STKK-----EESRVNLIMTDYCMPGMTGYDLLKRLKV--SSWKDVPVVVMSSENVPSRVT 158
+ + + V+LIMTDYCMP MTGY+LLK +K S++KDVPV++MSSEN SR+
Sbjct: 60 DVNRILCDLQRNAVHLIMTDYCMPEMTGYELLKIVKAETSAFKDVPVILMSSENDSSRIE 119
Query: 159 MCLEEGAEEFLLKPVRLSDLEKLQPRL 185
CL EGAEEF++KPV++ D+++LQ +
Sbjct: 120 RCLAEGAEEFIIKPVQMKDVQRLQGHI 146
>gi|162458152|ref|NP_001104849.1| cytokinin response regulator2 [Zea mays]
gi|5689236|dbj|BAA82873.1| ZmRR2 [Zea mays]
gi|6009897|dbj|BAA85113.1| response regulator 2 [Zea mays]
Length = 157
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 95/139 (68%), Gaps = 23/139 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL--GLIDNLENNSNASPSTLST 107
HVLAVDDS +DR ++ +LR S Y+VT VDS +ALE L GL+ +
Sbjct: 38 HVLAVDDSSVDRAVIAKILRSSKYRVTTVDSATRALELLALGLVPD-------------- 83
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAE 166
VN+I+TDY MPGMTGY+LLK +K SS + +PVV+MSSENVP+R++ CLEEGAE
Sbjct: 84 ------VNMIITDYWMPGMTGYELLKHVKESSALRAIPVVIMSSENVPTRISRCLEEGAE 137
Query: 167 EFLLKPVRLSDLEKLQPRL 185
+FLLKPVR +D+ +L R+
Sbjct: 138 DFLLKPVRPADVSRLCSRI 156
>gi|242043834|ref|XP_002459788.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
gi|241923165|gb|EER96309.1| hypothetical protein SORBIDRAFT_02g010680 [Sorghum bicolor]
Length = 168
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/137 (53%), Positives = 93/137 (67%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
V+AVDD +DR ++ LLR S Y+VT VDSG +ALE LG
Sbjct: 50 VIAVDDCSVDRALVTALLRRSKYRVTAVDSGKRALEILG--------------------S 89
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E V++I+TDY MP MTGYDLLK++K SS K +PVV+MSSENVP+R+T CLEEGAE+FL
Sbjct: 90 EPNVSMIITDYWMPEMTGYDLLKKVKESSKLKQIPVVIMSSENVPTRITRCLEEGAEDFL 149
Query: 170 LKPVRLSDLEKLQPRLL 186
LKPVR SD+ ++ R+L
Sbjct: 150 LKPVRPSDISRITTRIL 166
>gi|357164784|ref|XP_003580165.1| PREDICTED: two-component response regulator ARR4-like [Brachypodium
distachyon]
Length = 137
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/138 (51%), Positives = 96/138 (69%), Gaps = 21/138 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S ++VT VDS +ALE LG + +N
Sbjct: 19 HVLAVDDSSVDRAVITGILRSSKFRVTAVDSAKRALELLG------SGAN---------- 62
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V++I+TDY MP MTGY+LLK++K SS +++PVV+MSSENVP+R+ CLEEGAE+F
Sbjct: 63 ----VSMIITDYWMPDMTGYELLKKVKESSKLREIPVVIMSSENVPTRINRCLEEGAEDF 118
Query: 169 LLKPVRLSDLEKLQPRLL 186
LLKPVR SD+ +L R+L
Sbjct: 119 LLKPVRRSDVSRLCSRVL 136
>gi|222629233|gb|EEE61365.1| hypothetical protein OsJ_15511 [Oryza sativa Japonica Group]
Length = 526
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 110/182 (60%), Gaps = 29/182 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S ++VT VDSG +ALE LG
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLG-------------------- 55
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I+TDY MP MTGY+LLK++K SS K++PVV+MSSENV +R+ CLEEGAE+F
Sbjct: 56 SEPNVSMIITDYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDF 115
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRKALSAEA 228
LLKPV+ SD+ +L R+L+ D + K ++ S + + FS R S+
Sbjct: 116 LLKPVQPSDVSRLCSRVLRIAY--------DDRNQKMRANDIISDSKTEFSGRDNNSSNH 167
Query: 229 PE 230
P+
Sbjct: 168 PK 169
>gi|57834122|emb|CAE05717.2| OSJNBb0065J09.13 [Oryza sativa Japonica Group]
Length = 137
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 97/146 (66%), Gaps = 25/146 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S ++VT VDSG +ALE LG
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLG-------------------- 55
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I+TDY MP MTGY+LLK++K SS K++PVV+MSSENV +R+ CLEEGAE+F
Sbjct: 56 SEPNVSMIITDYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDF 115
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRSCG 194
LLKPV+ SD+ +L R+L R CG
Sbjct: 116 LLKPVQPSDVSRLCSRVL----RCCG 137
>gi|226492361|ref|NP_001146526.1| uncharacterized protein LOC100280118 [Zea mays]
gi|219887677|gb|ACL54213.1| unknown [Zea mays]
Length = 127
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 72/117 (61%), Positives = 91/117 (77%), Gaps = 7/117 (5%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVLAVDDS+IDRK++E LL+ SSYQVT VDSG+KALE LG DN +++ S+ S+
Sbjct: 10 FHVLAVDDSIIDRKLIEMLLKSSSYQVTTVDSGNKALELLGPRDNGAEDASPPSSSSSSS 69
Query: 109 ------KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVT 158
+E V+LI+TDYCMPGMTGYDLLKR+K SS KD+PVV+MSSENVP+R++
Sbjct: 70 SSSSPDHQEIDVSLIITDYCMPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARIS 126
>gi|242065846|ref|XP_002454212.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
gi|241934043|gb|EES07188.1| hypothetical protein SORBIDRAFT_04g026750 [Sorghum bicolor]
Length = 151
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 70/139 (50%), Positives = 95/139 (68%), Gaps = 21/139 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR I+ +LR S ++VT V+SG +ALE LG
Sbjct: 33 HVLAVDDSSVDRAIIAAILRSSRFRVTAVESGKRALELLG-------------------- 72
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I+TDY MP MTGY+LLK++K SS K +PVV+MSSENV +R++ CLEEGAE+F
Sbjct: 73 TEPNVSMIITDYWMPEMTGYELLKKVKESSKLKQIPVVIMSSENVSTRISRCLEEGAEDF 132
Query: 169 LLKPVRLSDLEKLQPRLLK 187
L+KPVR SD+ ++ R+L+
Sbjct: 133 LVKPVRASDVSRVFSRVLR 151
>gi|115459496|ref|NP_001053348.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|71273483|emb|CAI79409.1| Type A response regulator 5 [Oryza sativa Indica Group]
gi|87116378|dbj|BAE79348.1| typeA response regulator 5 [Oryza sativa Japonica Group]
gi|113564919|dbj|BAF15262.1| Os04g0524300 [Oryza sativa Japonica Group]
gi|116310946|emb|CAH67883.1| OSIGBa0153E02-OSIGBa0093I20.12 [Oryza sativa Indica Group]
gi|118790846|tpd|FAA00266.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215741219|dbj|BAG97714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195239|gb|EEC77666.1| hypothetical protein OsI_16696 [Oryza sativa Indica Group]
Length = 134
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/139 (51%), Positives = 95/139 (68%), Gaps = 21/139 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S ++VT VDSG +ALE LG
Sbjct: 16 HVLAVDDSSVDRAVISGILRSSQFRVTAVDSGKRALELLG-------------------- 55
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I+TDY MP MTGY+LLK++K SS K++PVV+MSSENV +R+ CLEEGAE+F
Sbjct: 56 SEPNVSMIITDYWMPEMTGYELLKKVKESSRLKEIPVVIMSSENVSTRINRCLEEGAEDF 115
Query: 169 LLKPVRLSDLEKLQPRLLK 187
LLKPV+ SD+ +L R+L+
Sbjct: 116 LLKPVQPSDVSRLCSRVLR 134
>gi|22831009|dbj|BAC15873.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273487|emb|CAI79411.1| Type A response regulator 7 [Oryza sativa Indica Group]
gi|87116384|dbj|BAE79351.1| typeA response regulator 7 [Oryza sativa Japonica Group]
gi|118790860|tpd|FAA00268.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 206
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/139 (49%), Positives = 93/139 (66%), Gaps = 25/139 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
+V+AVDDS +DR ++ LLR S Y+ DSG +ALE LG
Sbjct: 92 YVMAVDDSSVDRAVITALLRRSKYR----DSGKRALEILG-------------------- 127
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I+TDY MP MTGYDLLK++K SS K +PVV+MSSENVP+R++ CLEEGAE+F
Sbjct: 128 SEPNVSMIITDYWMPEMTGYDLLKKIKESSELKQIPVVIMSSENVPTRISRCLEEGAEDF 187
Query: 169 LLKPVRLSDLEKLQPRLLK 187
LLKPVR +D+ ++ R+L+
Sbjct: 188 LLKPVRPADISRITSRMLQ 206
>gi|168064728|ref|XP_001784311.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664142|gb|EDQ50873.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 149
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 97/136 (71%), Gaps = 3/136 (2%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+HVLAVDDS++D++++E LL+ + VT VDS +AL+ LGL + ++S +
Sbjct: 2 YHVLAVDDSMVDQRVIEKLLK-PLHAVTTVDSAVRALDVLGLSETRPSSSKVLHFNSFVQ 60
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKV--SSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
++ +NLIMTDY MP MTGYDLLKR+K S+ K++PVV+MSSEN R+ CL EGA+
Sbjct: 61 IKKLDINLIMTDYFMPEMTGYDLLKRVKAKSSALKEIPVVLMSSENDSHRIRRCLAEGAD 120
Query: 167 EFLLKPVRLSDLEKLQ 182
FL KPV+L+D+++L+
Sbjct: 121 AFLTKPVQLADVKRLR 136
>gi|242074746|ref|XP_002447309.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
gi|241938492|gb|EES11637.1| hypothetical protein SORBIDRAFT_06g032600 [Sorghum bicolor]
Length = 170
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 90/137 (65%), Gaps = 19/137 (13%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S Y+VT V+S +A L
Sbjct: 51 HVLAVDDSSVDRAVIAKILRSSKYRVTTVESATRA------------------LELLALG 92
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
VN+I+TDY MPGMTGY+LLK +K SS +++PVV+MSSENVP+R+T CLEEGAE+F
Sbjct: 93 LLPDVNMIITDYWMPGMTGYELLKHVKESSELREIPVVIMSSENVPTRITRCLEEGAEDF 152
Query: 169 LLKPVRLSDLEKLQPRL 185
LLKPVR SD+ +L R+
Sbjct: 153 LLKPVRPSDVSRLCSRI 169
>gi|449457395|ref|XP_004146434.1| PREDICTED: two-component response regulator ARR17-like [Cucumis
sativus]
gi|449526784|ref|XP_004170393.1| PREDICTED: two-component response regulator ARR17-like [Cucumis
sativus]
Length = 162
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 76/138 (55%), Positives = 110/138 (79%), Gaps = 3/138 (2%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDD+L+DRK++E LL+ SS +VT ++G ALE+LGL+D E+N + + + +
Sbjct: 26 HVLAVDDNLVDRKLVEKLLKNSSCKVTTAENGVSALEFLGLLD--EHNQHTNFERSNEWQ 83
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ S+VN+I+TDYCMPGM+GY+LLK++K SS K+VPVVV+SSENVP+R+ CLEEGAE F
Sbjct: 84 QRSKVNMIITDYCMPGMSGYELLKKIKRSSKMKEVPVVVVSSENVPTRINKCLEEGAEMF 143
Query: 169 LLKPVRLSDLEKLQPRLL 186
+LKP++ SD+ KL+ + +
Sbjct: 144 MLKPLKQSDVVKLKCQFM 161
>gi|255564944|ref|XP_002523465.1| receptor histidine kinase, putative [Ricinus communis]
gi|223537293|gb|EEF38924.1| receptor histidine kinase, putative [Ricinus communis]
Length = 185
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 93/135 (68%), Gaps = 10/135 (7%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDD +DRKI+E LL+ +S++VT VD+G KA+E LGL + + S +
Sbjct: 19 IHVLAVDDCFLDRKIVEKLLKNASFKVTSVDNGKKAMEILGLSQDKVDKSTYN------- 71
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ ++++I+TDYCMP M GYDLL +K S+ K +PVV++SSE P R++ CL GAE+
Sbjct: 72 --DQKIDIILTDYCMPEMNGYDLLMAVKGHSNVKSIPVVIISSEYDPQRISRCLANGAED 129
Query: 168 FLLKPVRLSDLEKLQ 182
FL KP++ DL+KL+
Sbjct: 130 FLQKPLQQKDLQKLR 144
>gi|3953605|dbj|BAA34730.1| response regulator 6 [Arabidopsis thaliana]
Length = 162
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/144 (49%), Positives = 91/144 (63%), Gaps = 33/144 (22%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVLAVDDS +DRK +E LLRVSS +VT VDS +AL+YLGL ++E S
Sbjct: 25 LHVLAVDDSHVDRKFIERLLRVSSCKVTVVDSATRALQYLGL--DVEEKSVGF------- 75
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E+ +VNLIMTDY MPGMTGY+LLK++K CLEEGAE+F
Sbjct: 76 -EDLKVNLIMTDYSMPGMTGYELLKKIK-----------------------CLEEGAEDF 111
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRS 192
LLKPV+LSD+++L+ L+K + S
Sbjct: 112 LLKPVKLSDVKRLRDSLMKVEDLS 135
>gi|242061964|ref|XP_002452271.1| hypothetical protein SORBIDRAFT_04g022780 [Sorghum bicolor]
gi|241932102|gb|EES05247.1| hypothetical protein SORBIDRAFT_04g022780 [Sorghum bicolor]
Length = 168
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 65/134 (48%), Positives = 93/134 (69%), Gaps = 12/134 (8%)
Query: 55 DDSLIDRKILENLLR-----VSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
DDS IDRK++E LLR + + VT VDSG KA+E+L L++ +S+A+
Sbjct: 21 DDSPIDRKVVELLLRNHKGGAAPFHVTAVDSGKKAMEHLRLMEQDSLDSSAA------HA 74
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++++TDYCMP MTGYDLLK +K +SS +PVVVMSSEN P R++ CL GAE+F
Sbjct: 75 NELTVDIVLTDYCMPEMTGYDLLKAIKALSSPTPIPVVVMSSENEPQRISRCLTAGAEDF 134
Query: 169 LLKPVRLSDLEKLQ 182
+LKP++ D+++L+
Sbjct: 135 ILKPLKTKDVQRLR 148
>gi|162459462|ref|NP_001104858.1| response regulator 7 [Zea mays]
gi|12060390|dbj|BAB20582.1| response regulator 7 [Zea mays]
Length = 242
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/190 (38%), Positives = 110/190 (57%), Gaps = 26/190 (13%)
Query: 51 VLAVDDSLIDRKILENLLR-------VSSYQVTCVDSGDKALEYLGLIDNLENNSNASPS 103
VL VDDS +DRK++E LLR + + VT VDSG KA+E+L L++
Sbjct: 15 VLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQ-----GGQLD 69
Query: 104 TLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLE 162
+ + +++++TDYCMP MTGYDLLK +K +SS +PVVVMSSEN P R++ CL
Sbjct: 70 SCAADANRITIDIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLT 129
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRK 222
GAE+F+LKP++ D+++L R+C + +D ++ + +SS+ S +
Sbjct: 130 AGAEDFILKPLKTKDVQRL---------RNCSSAARPRDDAAHQCESLRSSSRKLRSDQV 180
Query: 223 ALSAEAPERR 232
A AP R
Sbjct: 181 A----APAHR 186
>gi|297599428|ref|NP_001047142.2| Os02g0557800 [Oryza sativa Japonica Group]
gi|255671003|dbj|BAF09056.2| Os02g0557800, partial [Oryza sativa Japonica Group]
Length = 306
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/157 (40%), Positives = 97/157 (61%), Gaps = 14/157 (8%)
Query: 40 QPQQQQQETFHVLAVDDSLIDRKILENLLRVSS-------------YQVTCVDSGDKALE 86
+P++ E VL VDDS +DR+++E LLR + VT VDSG KA+E
Sbjct: 51 RPERMGAEAVRVLVVDDSPVDRRVVELLLRAHCGGGGGAAAGEAAPFHVTAVDSGKKAME 110
Query: 87 YLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPV 145
LG ++ S + + +++++TDYCMP MTGYDLLK +K + S +PV
Sbjct: 111 LLGRRRGDRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPV 170
Query: 146 VVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQ 182
VVMSSEN P R++ CL GAE+F+LKP++++D+++L+
Sbjct: 171 VVMSSENEPQRISRCLTAGAEDFILKPLKMNDVQRLR 207
>gi|357463579|ref|XP_003602071.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355491119|gb|AES72322.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 128
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/107 (61%), Positives = 80/107 (74%), Gaps = 10/107 (9%)
Query: 40 QPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL-IDNLENNS 98
QPQ +QE FHVLAVDDS+IDR +LE LLR SS +VTCVDSGDKAL+YLGL ID + +
Sbjct: 13 QPQNLKQEHFHVLAVDDSVIDRMLLERLLRDSSCKVTCVDSGDKALKYLGLNIDEISSTK 72
Query: 99 NAS--------PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKV 137
++ P L +E ++VNLIMTDYCMPGM+GYDLLKR+KV
Sbjct: 73 SSILESSSPSLPQPLQL-QEGNKVNLIMTDYCMPGMSGYDLLKRVKV 118
>gi|226497480|ref|NP_001147402.1| RR6 - Corn type-A response regulator [Zea mays]
gi|223946411|gb|ACN27289.1| unknown [Zea mays]
gi|414584832|tpg|DAA35403.1| TPA: response regulatorResponse regulator 1 [Zea mays]
Length = 156
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 88/137 (64%), Gaps = 19/137 (13%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S Y+VT V+S +A P
Sbjct: 37 HVLAVDDSSVDRAVIARILRGSRYKVTAVESATRA--------LELLALGLLPD------ 82
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V++I+TDY MPGMTGY+LLKR+K S+ + +PVV+MSSENV +R+T CLEEGAE F
Sbjct: 83 ----VSMIITDYWMPGMTGYELLKRVKESAALRGIPVVIMSSENVSTRITRCLEEGAEGF 138
Query: 169 LLKPVRLSDLEKLQPRL 185
LLKPVR +D+ +L R+
Sbjct: 139 LLKPVRPADVSRLCSRI 155
>gi|260765421|gb|ACX49754.1| cytokinin response regulator 11 [Zea mays]
Length = 156
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 88/137 (64%), Gaps = 19/137 (13%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S Y+VT V+S +A P
Sbjct: 37 HVLAVDDSSVDRTVIARILRGSRYKVTAVESATRA--------LELLALGLLPD------ 82
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V++I+TDY MPGMTGY+LLKR+K S+ + +PVV+MSSENV +R+T CLEEGAE F
Sbjct: 83 ----VSMIITDYWMPGMTGYELLKRVKESAALRGIPVVIMSSENVSTRITRCLEEGAEGF 138
Query: 169 LLKPVRLSDLEKLQPRL 185
LLKPVR +D+ +L R+
Sbjct: 139 LLKPVRPADVSRLCSRI 155
>gi|125539898|gb|EAY86293.1| hypothetical protein OsI_07664 [Oryza sativa Indica Group]
Length = 205
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 93/150 (62%), Gaps = 14/150 (9%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSS-------------YQVTCVDSGDKALEYLGLIDN 93
E VL VDDS +DR+++E LLR + VT VDSG KA+E LG
Sbjct: 4 EAVRVLVVDDSPVDRRVVELLLRAHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLGRRRG 63
Query: 94 LENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSEN 152
++ S + + +++++TDYCMP MTGYDLLK +K + S +PVVVMSSEN
Sbjct: 64 DRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSEN 123
Query: 153 VPSRVTMCLEEGAEEFLLKPVRLSDLEKLQ 182
P R++ CL GAE+F+LKP++++D+++L+
Sbjct: 124 EPQRISRCLTAGAEDFILKPLKMNDVQRLR 153
>gi|357149551|ref|XP_003575151.1| PREDICTED: two-component response regulator ARR3-like [Brachypodium
distachyon]
Length = 226
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 93/141 (65%), Gaps = 15/141 (10%)
Query: 46 QETFHVLAVDDSLIDRKILENLL---RVSSYQVTCVDSGDKALEYLGLIDNLENNSNASP 102
+E VL VDDS +DRKI++ LL R S++ VT VDSG KA+E LG P
Sbjct: 10 EEKLRVLVVDDSPVDRKIVQLLLNNHRGSAFHVTVVDSGKKAMELLG----------QKP 59
Query: 103 STLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCL 161
++ S +++++TDYCMP MTGYDLLK +K ++S +PVVVMSSEN P R+ CL
Sbjct: 60 QAQEEQQRRS-IDIVLTDYCMPEMTGYDLLKAIKALNSPNPIPVVVMSSENEPQRINRCL 118
Query: 162 EEGAEEFLLKPVRLSDLEKLQ 182
GAE+F++KP+R D+++L+
Sbjct: 119 TAGAEDFIVKPLRTKDVQRLR 139
>gi|162463265|ref|NP_001104838.1| cytokinin response regulator1 [Zea mays]
gi|4512216|dbj|BAA75253.1| response regulator [Zea mays]
gi|6009895|dbj|BAA85112.1| response regulator 1 [Zea mays]
Length = 157
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 88/137 (64%), Gaps = 19/137 (13%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S Y+VT V+S +A P
Sbjct: 38 HVLAVDDSSVDRAVIARILRGSRYRVTAVESATRA--------LELLALGLLPD------ 83
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V++I+TDY MPGMTGY+LLK +K S+ + +PVV+MSSENVP+R+T CLEEGAE F
Sbjct: 84 ----VSMIITDYWMPGMTGYELLKCVKESAALRGIPVVIMSSENVPTRITRCLEEGAEGF 139
Query: 169 LLKPVRLSDLEKLQPRL 185
LLKPVR +D+ +L R+
Sbjct: 140 LLKPVRPADVSRLCSRI 156
>gi|194697208|gb|ACF82688.1| unknown [Zea mays]
gi|413922696|gb|AFW62628.1| response regulator 7 [Zea mays]
Length = 242
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 67/172 (38%), Positives = 103/172 (59%), Gaps = 22/172 (12%)
Query: 51 VLAVDDSLIDRKILENLLR-------VSSYQVTCVDSGDKALEYLGLIDNLENNSNASPS 103
VL VDDS +DRK++E LLR + + VT VDSG KA+E+L L++
Sbjct: 15 VLVVDDSPVDRKVVELLLRNHNHQGGAAPFHVTAVDSGKKAMEHLRLMEQ-----GGQLD 69
Query: 104 TLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLE 162
+ + +++++TDYCMP MTGYDLLK +K +SS +PVVVMSSEN P R++ CL
Sbjct: 70 SCAADANRITIDIVLTDYCMPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLT 129
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSST 214
GAE+F+LKP++ D+++L R+C + +D ++ + + S+
Sbjct: 130 AGAEDFILKPLKTKDVQRL---------RNCSSAARPRDDAAHQCESLRRSS 172
>gi|7594516|emb|CAB88041.1| response regulator-like protein [Arabidopsis thaliana]
Length = 122
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 60/114 (52%), Positives = 84/114 (73%), Gaps = 10/114 (8%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
+E HVLAVDD+LIDRK++E +L++SS +VT ++G +ALEYLGL D P
Sbjct: 16 MEEELHVLAVDDNLIDRKLVERILKISSCKVTTAENGLRALEYLGLGD---------PQQ 66
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRV 157
+ +VNLI+TDYCMPGMTG++LLK++K SS K+VPVV++SSEN+P+R+
Sbjct: 67 TDSLTNVMKVNLIITDYCMPGMTGFELLKKVKESSNLKEVPVVILSSENIPTRI 120
>gi|46390908|dbj|BAD16423.1| putative response regulator 7 [Oryza sativa Japonica Group]
gi|71273477|emb|CAI79406.1| Type A response regulator 2 [Oryza sativa Indica Group]
gi|87116394|dbj|BAE79356.1| typeA response regulator 2 [Oryza sativa Japonica Group]
gi|118790824|tpd|FAA00264.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215697882|dbj|BAG92075.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 252
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/150 (42%), Positives = 93/150 (62%), Gaps = 14/150 (9%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSS-------------YQVTCVDSGDKALEYLGLIDN 93
E VL VDDS +DR+++E LLR + VT VDSG KA+E LG
Sbjct: 4 EAVRVLVVDDSPVDRRVVELLLRAHCGGGGGAAAGEAAPFHVTAVDSGKKAMELLGRRRG 63
Query: 94 LENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSEN 152
++ S + + +++++TDYCMP MTGYDLLK +K + S +PVVVMSSEN
Sbjct: 64 DRDHLTPSSPAAAAAANDQAIDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSEN 123
Query: 153 VPSRVTMCLEEGAEEFLLKPVRLSDLEKLQ 182
P R++ CL GAE+F+LKP++++D+++L+
Sbjct: 124 EPQRISRCLTAGAEDFILKPLKMNDVQRLR 153
>gi|359828770|gb|AEV76987.1| type A response regulator 1, partial [Triticum aestivum]
Length = 209
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 114/198 (57%), Gaps = 41/198 (20%)
Query: 51 VLAVDDSLIDRKILENLLR----VSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
VL VDDS +DRK++E +L S+ V VDS KA+E+LGL D
Sbjct: 5 VLLVDDSPVDRKVVELVLGSNTFAGSFHVVAVDSAKKAMEFLGLKDG------------- 51
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGA 165
+E V++++TDYCMP MTGYDLLK +K +S K +PV+VMSSEN P R++ CL+ GA
Sbjct: 52 ---KEQAVDMVLTDYCMPEMTGYDLLKAIKAMSPLKPIPVIVMSSENEPQRISRCLKAGA 108
Query: 166 EEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD--NDNKNETSNYKSSTNSAFSKRKA 223
E++++KP++ D+ PRL RSC N + D ++++++ ++ + S R
Sbjct: 109 EDYIVKPLQSKDV----PRL-----RSCSNAKPKDPPCSTVSKSADHIAAVDGTSSLR-- 157
Query: 224 LSAEAPERRPKMKEVAVV 241
RR + ++A+V
Sbjct: 158 -------RRAHLTDIAMV 168
>gi|357163783|ref|XP_003579845.1| PREDICTED: two-component response regulator ARR9-like [Brachypodium
distachyon]
Length = 224
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 98/161 (60%), Gaps = 29/161 (18%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVS----SYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
+ VL VDDS +DRK++E +L S S+ V VDS KA+E+LGL D
Sbjct: 7 EGVMRVLLVDDSPVDRKVVELVLGSSACAGSFHVIAVDSAKKAMEFLGLKDG-------- 58
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMC 160
KE+ +++++TDYCMP MTGYDLLK +K +S K +PV+VMSSEN P R++ C
Sbjct: 59 -------KEQQDIDMVLTDYCMPEMTGYDLLKAIKALSPLKPIPVIVMSSENEPQRISRC 111
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDN 201
L+ GAE++++KP+R D+ PRL+ SC N + D
Sbjct: 112 LKAGAEDYIVKPLRSKDV----PRLM-----SCSNVKPKDT 143
>gi|195611056|gb|ACG27358.1| RR6 - Corn type-A response regulator [Zea mays]
Length = 156
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 87/137 (63%), Gaps = 19/137 (13%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S Y+VT V+S +A P
Sbjct: 37 HVLAVDDSSVDRAVIARILRGSRYKVTAVESATRA--------LELLALGLLPD------ 82
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V++I+TDY MPGMTGY+LLKR+K S+ + +PVV+MSSENV +R+T LEEGAE F
Sbjct: 83 ----VSMIITDYWMPGMTGYELLKRVKESAALRGIPVVIMSSENVSTRITRYLEEGAEGF 138
Query: 169 LLKPVRLSDLEKLQPRL 185
LLKPVR +D+ +L R+
Sbjct: 139 LLKPVRPADVSRLCSRI 155
>gi|224034623|gb|ACN36387.1| unknown [Zea mays]
gi|413918403|gb|AFW58335.1| RR1-Corn type-A response regulator [Zea mays]
Length = 232
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 107/191 (56%), Gaps = 21/191 (10%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLR----VSSYQVTCVDSGDKALEYLGLIDNLENNSN 99
+ + VL VDDS +DR++ + LL S+ V VDS KA+E+LGL D
Sbjct: 9 EAEGVMRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIAVDSARKAMEFLGLKDG------ 62
Query: 100 ASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVT 158
EE V++++TDYCMP MTGYDLLK +K ++ + +PVVVMSSE+ P R++
Sbjct: 63 ---------GEEQAVDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRIS 113
Query: 159 MCLEEGAEEFLLKPVRLSDLEKLQ-PRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSA 217
CL GAE+F++KP++ D+++L+ P++ E + +N+ + + S
Sbjct: 114 RCLSAGAEDFIVKPLQSKDVQRLRNCSAAARPSKGAAPCEAAVVAKRNQKPPHPAGAASP 173
Query: 218 FSKRKALSAEA 228
+R +L+ A
Sbjct: 174 SGRRASLAGVA 184
>gi|195656043|gb|ACG47489.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 232
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 106/191 (55%), Gaps = 21/191 (10%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLR----VSSYQVTCVDSGDKALEYLGLIDNLENNSN 99
+ + VL VDDS +DR++ + LL S+ V VDS KA+E+LGL D
Sbjct: 9 EAEGVMRVLVVDDSPVDRRVAQLLLSSDSCAGSFHVIAVDSARKAMEFLGLKDG------ 62
Query: 100 ASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVT 158
EE V++++TDYCMP MTGYDLLK +K ++ + +PVVVMSSE+ P R++
Sbjct: 63 ---------GEEQAVDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRIS 113
Query: 159 MCLEEGAEEFLLKPVRLSDLEKLQ-PRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSA 217
CL GAE+F++KP++ D+++L+ P++ E + +N + + S
Sbjct: 114 RCLSAGAEDFIVKPLQSKDVQRLRNCSAAARPSKGAAPCEAAVVAKRNHKPPHPAGAASP 173
Query: 218 FSKRKALSAEA 228
+R +L+ A
Sbjct: 174 SGRRASLAGVA 184
>gi|195651747|gb|ACG45341.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 238
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 89/142 (62%), Gaps = 20/142 (14%)
Query: 46 QETFHVLAVDDSLIDRKILENLLR----VSSYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
+ VL VDDS +DR++ + LL S+ V VDS KA+E+LGL D
Sbjct: 9 EGVMRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDG-------- 60
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMC 160
+E +++++TDYCMP MTGYDLLK +K ++ K +PV+VMSSE+ P R++ C
Sbjct: 61 -------GKEQAIDMVLTDYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRC 113
Query: 161 LEEGAEEFLLKPVRLSDLEKLQ 182
L GAE+F++KP++ D+++L+
Sbjct: 114 LNAGAEDFIVKPLQSKDVQRLR 135
>gi|242073184|ref|XP_002446528.1| hypothetical protein SORBIDRAFT_06g017550 [Sorghum bicolor]
gi|241937711|gb|EES10856.1| hypothetical protein SORBIDRAFT_06g017550 [Sorghum bicolor]
Length = 249
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 90/143 (62%), Gaps = 19/143 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLR----VSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
++ VL VDDS +DR++ + LL S+ V VDS KA+E+LGL D
Sbjct: 10 EEGVMRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDG------- 62
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTM 159
+E +++++TDYCMP MTGYDLLK +K ++ K +PV+VMSSE+ P R++
Sbjct: 63 -------GGKEQAIDMVLTDYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISR 115
Query: 160 CLEEGAEEFLLKPVRLSDLEKLQ 182
CL GAE+F++KP++ D+++L+
Sbjct: 116 CLSAGAEDFIVKPLQSKDVQRLR 138
>gi|219363715|ref|NP_001137062.1| uncharacterized protein LOC100217235 [Zea mays]
gi|194698206|gb|ACF83187.1| unknown [Zea mays]
gi|224029529|gb|ACN33840.1| unknown [Zea mays]
gi|414587101|tpg|DAA37672.1| TPA: RR1-Corn type-A response regulator [Zea mays]
Length = 244
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 89/142 (62%), Gaps = 20/142 (14%)
Query: 46 QETFHVLAVDDSLIDRKILENLLR----VSSYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
+ VL VDDS +DR++ + LL S+ V VDS KA+E+LGL D
Sbjct: 9 EGVMRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDG-------- 60
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMC 160
+E +++++TDYCMP MTGYDLLK +K ++ K +PV+VMSSE+ P R++ C
Sbjct: 61 -------GKEQAIDMVLTDYCMPEMTGYDLLKAIKALNPLKPIPVIVMSSEDEPQRISRC 113
Query: 161 LEEGAEEFLLKPVRLSDLEKLQ 182
L GAE+F++KP++ D+++L+
Sbjct: 114 LNAGAEDFIVKPLQSKDVQRLR 135
>gi|242075916|ref|XP_002447894.1| hypothetical protein SORBIDRAFT_06g017560 [Sorghum bicolor]
gi|241939077|gb|EES12222.1| hypothetical protein SORBIDRAFT_06g017560 [Sorghum bicolor]
Length = 194
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 90/143 (62%), Gaps = 19/143 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLR----VSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
++ VL VDDS +DR++ + LL S+ V VDS KA+E+LGL D
Sbjct: 10 EEGVMRVLLVDDSPVDRRVAQLLLSSNSCAGSFHVIAVDSAKKAMEFLGLKDG------- 62
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTM 159
+E +++++TDYCMP MTGYDLL+ +K ++ K +PV+VMSSE+ P R++
Sbjct: 63 -------GGKEQTIDMVLTDYCMPEMTGYDLLRAIKALNPLKPIPVIVMSSEDEPQRISR 115
Query: 160 CLEEGAEEFLLKPVRLSDLEKLQ 182
CL GAE++++KP++ D+++L+
Sbjct: 116 CLNAGAEDYIVKPLQSKDVQRLR 138
>gi|242049694|ref|XP_002462591.1| hypothetical protein SORBIDRAFT_02g028660 [Sorghum bicolor]
gi|241925968|gb|EER99112.1| hypothetical protein SORBIDRAFT_02g028660 [Sorghum bicolor]
Length = 123
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 88/138 (63%), Gaps = 25/138 (18%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD+ +DR + +L+ + QVT V+ +ALE+L ++EN+
Sbjct: 7 HVLIVDDTFVDRLVASRVLKNCNIQVTIVEGPKQALEFL----DVEND------------ 50
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
VNLI+TDYCMPGMTGYDLL +K S K +PVV+MSS+N+P R+ CL+ GA+E+
Sbjct: 51 ----VNLILTDYCMPGMTGYDLLLEVKESPKLKHIPVVIMSSDNIPERMQKCLDAGAKEY 106
Query: 169 LLKPVRLSDLEKLQPRLL 186
++KP++ D+ PR+L
Sbjct: 107 IIKPIKAVDV----PRIL 120
>gi|449529439|ref|XP_004171707.1| PREDICTED: two-component response regulator ARR8-like, partial
[Cucumis sativus]
Length = 109
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/87 (65%), Positives = 72/87 (82%), Gaps = 2/87 (2%)
Query: 52 LAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS--TKK 109
LAVDDSLIDRK+LE LL +SS QVTCV+SGDKAL YLGL+D+ + ++S + S ++
Sbjct: 23 LAVDDSLIDRKLLEKLLTISSCQVTCVESGDKALRYLGLLDHDLDPFSSSSFSSSQLSQH 82
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLK 136
+E +VNLIMTD+CMPGM+GYDLLKRLK
Sbjct: 83 QEVKVNLIMTDFCMPGMSGYDLLKRLK 109
>gi|71273475|emb|CAI79405.1| Type A response regulator 1 [Oryza sativa Indica Group]
gi|218194921|gb|EEC77348.1| hypothetical protein OsI_16028 [Oryza sativa Indica Group]
Length = 231
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 98/162 (60%), Gaps = 31/162 (19%)
Query: 51 VLAVDDSLIDRKILENLLRVS----SYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
VL VDDS +DR++++ LL S S+ V VDS KA+E+LGL
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGL---------------- 53
Query: 107 TKKEESR---VNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLE 162
KEE + +++++TDYCMP MTGY+LLK +K +S K +PV+VMSSEN P R++ C+
Sbjct: 54 --KEEGKEQAIDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMN 111
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNK 204
GAE+F++KP++ D+++L R N C D+ +D K
Sbjct: 112 AGAEDFIVKPLQSKDVQRL--RKCSPANTQCC---DAGSDGK 148
>gi|222628933|gb|EEE61065.1| hypothetical protein OsJ_14923 [Oryza sativa Japonica Group]
Length = 231
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 89/137 (64%), Gaps = 20/137 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVS----SYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
VL VDDS +DR++++ LL S S+ V VDS KAL +LGL
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKALGFLGL---------------K 54
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGA 165
K +E +++++TDYCMP MTGY+LLK +K +S K +PV+VMSSEN P R++ C+ GA
Sbjct: 55 EKGKEQAIDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGA 114
Query: 166 EEFLLKPVRLSDLEKLQ 182
E+F++KP++ D+++L+
Sbjct: 115 EDFIVKPLQSKDVQRLR 131
>gi|115458564|ref|NP_001052882.1| Os04g0442300 [Oryza sativa Japonica Group]
gi|87116392|dbj|BAE79355.1| typeA response regulator 1 [Oryza sativa Japonica Group]
gi|113564453|dbj|BAF14796.1| Os04g0442300 [Oryza sativa Japonica Group]
gi|118790814|tpd|FAA00263.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|215704280|dbj|BAG93120.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740726|dbj|BAG97382.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 231
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 90/137 (65%), Gaps = 20/137 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVS----SYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
VL VDDS +DR++++ LL S S+ V VDS KA+E+LGL
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGL---------------K 54
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGA 165
+ +E +++++TDYCMP MTGY+LLK +K +S K +PV+VMSSEN P R++ C+ GA
Sbjct: 55 EEGKEQAIDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRISRCMNAGA 114
Query: 166 EEFLLKPVRLSDLEKLQ 182
E+F++KP++ D+++L+
Sbjct: 115 EDFIVKPLQSKDVQRLR 131
>gi|414870674|tpg|DAA49231.1| TPA: hypothetical protein ZEAMMB73_704016 [Zea mays]
Length = 123
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/138 (42%), Positives = 88/138 (63%), Gaps = 25/138 (18%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD+ +DR + +L+ + QVT V+ +AL++L ++EN+
Sbjct: 7 HVLIVDDTFVDRLVASRVLKTCNIQVTMVEGPKQALDFL----DVEND------------ 50
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
VNLI+TDYCMPGMTGYDLL +K S K +PVVVMSS+++P R+ C++ GA+E+
Sbjct: 51 ----VNLILTDYCMPGMTGYDLLMEVKESPKLKHIPVVVMSSDHIPQRMQKCMDAGAKEY 106
Query: 169 LLKPVRLSDLEKLQPRLL 186
++KP++ D+ PR+L
Sbjct: 107 IIKPIKAIDV----PRIL 120
>gi|195651177|gb|ACG45056.1| RR1 - Corn type-A response regulator [Zea mays]
Length = 233
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 90/144 (62%), Gaps = 22/144 (15%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLR----VSSYQVTCVDSGDKALEYLGLIDNLENNSN 99
+ + VL VDDS +DR++ + LL S+ V +DS KA+E+LGL D
Sbjct: 9 EAEGVMRVLVVDDSPVDRRVAQLLLSSDSCAGSFHV--IDSARKAMEFLGLKDG------ 60
Query: 100 ASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVT 158
EE V++++TDYCMP MTGYDLLK +K ++ + +PVVVMSSE+ P R++
Sbjct: 61 ---------GEEQAVDIVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRIS 111
Query: 159 MCLEEGAEEFLLKPVRLSDLEKLQ 182
CL GAE+F++KP++ D+++L+
Sbjct: 112 RCLSAGAEDFIVKPLQSKDVQRLR 135
>gi|383792043|dbj|BAM10424.1| Type-a response regulator protein, partial [Salix japonica]
Length = 94
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 78/104 (75%), Gaps = 11/104 (10%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDDS +DRK++E LL++SS +VT V+SG +AL+YLGL + S S
Sbjct: 1 VLAVDDSFVDRKVIERLLKISSCKVTVVESGSRALQYLGL--------DGEKS--SVGFN 50
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENV 153
+ +++LIMTDY MPGMTGY+LLK++K SS ++++PVV+MSSEN+
Sbjct: 51 DLKIHLIMTDYSMPGMTGYELLKKIKESSAFREIPVVIMSSENI 94
>gi|242081261|ref|XP_002445399.1| hypothetical protein SORBIDRAFT_07g015180 [Sorghum bicolor]
gi|241941749|gb|EES14894.1| hypothetical protein SORBIDRAFT_07g015180 [Sorghum bicolor]
Length = 123
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 84/133 (63%), Gaps = 21/133 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD+ +DR + +L+ + QVT V+ +AL++L ++EN+
Sbjct: 7 HVLIVDDTFVDRLVASRVLKSCNIQVTIVEGPKQALDFL----DVEND------------ 50
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V LI+TDYCMPGMTGYDLL +K S +PVV+MSS+N+P R+ CL A+E+
Sbjct: 51 ----VKLILTDYCMPGMTGYDLLMEVKESPKLNHIPVVIMSSDNIPERIQKCLAARAKEY 106
Query: 169 LLKPVRLSDLEKL 181
++KP++++D+ ++
Sbjct: 107 IIKPIKVADVHRI 119
>gi|219888705|gb|ACL54727.1| unknown [Zea mays]
gi|413951287|gb|AFW83936.1| hypothetical protein ZEAMMB73_670408 [Zea mays]
Length = 144
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/66 (68%), Positives = 58/66 (87%), Gaps = 1/66 (1%)
Query: 123 MPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKL 181
MPGMTGYDLLKR+K SS KD+PVV+MSSENVP+R++ CL++GAEEF LKPV+ +D++KL
Sbjct: 1 MPGMTGYDLLKRVKGSSSLKDIPVVIMSSENVPARISRCLQDGAEEFFLKPVKPADMKKL 60
Query: 182 QPRLLK 187
+ LLK
Sbjct: 61 KSHLLK 66
>gi|87116398|dbj|BAE79358.1| typeA response regulator 12 [Oryza sativa Japonica Group]
gi|118790879|tpd|FAA00271.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 121
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/138 (40%), Positives = 82/138 (59%), Gaps = 25/138 (18%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD+L+DR ++ L + +VT V+S +AL +L
Sbjct: 5 HVLVVDDTLVDRHVVSMALMRHNVRVTAVESVMQALMFL--------------------D 44
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E VN+I++DYCMP MTGYDLL +K S +PVV+ SS+N+P R+ CL+ GA+++
Sbjct: 45 SEHDVNMIVSDYCMPDMTGYDLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDY 104
Query: 169 LLKPVRLSDLEKLQPRLL 186
+LKPV++ DL PR+L
Sbjct: 105 ILKPVKIVDL----PRIL 118
>gi|357138640|ref|XP_003570898.1| PREDICTED: two-component response regulator ARR8-like [Brachypodium
distachyon]
Length = 133
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/133 (39%), Positives = 80/133 (60%), Gaps = 21/133 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD+ DR +L LL+ S +VT V+ +ALE+L
Sbjct: 17 HVLVVDDTRGDRLVLTYLLQRSHVRVTAVEGVKEALEFL--------------------D 56
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
++ VN+I++DYCMP M GYDLL +K S +PVV+ SS+N+P R+ CL+ GA+E+
Sbjct: 57 SQNDVNMIVSDYCMPEMNGYDLLMEVKNSPPLAHIPVVIASSDNIPERIQKCLDGGAKEY 116
Query: 169 LLKPVRLSDLEKL 181
++KPV++ D+ ++
Sbjct: 117 IVKPVQIPDVLRI 129
>gi|87116400|dbj|BAE79359.1| typeA response regulator 13 [Oryza sativa Japonica Group]
Length = 121
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 81/138 (58%), Gaps = 25/138 (18%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD+ +DR ++ L + +VT V+S +AL +L
Sbjct: 5 HVLVVDDTHVDRHVISMALMRHNVRVTAVESVMQALVFL--------------------D 44
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E VN+I++DYCMP MTGYDLL +K S +PV++ SS+N+P R+ C + GA+++
Sbjct: 45 SEHDVNMIVSDYCMPEMTGYDLLMEVKKSPRLVHLPVIIASSDNIPERIRKCFDGGAKDY 104
Query: 169 LLKPVRLSDLEKLQPRLL 186
+LKPV+++D+ PR+L
Sbjct: 105 ILKPVKIADV----PRIL 118
>gi|125561361|gb|EAZ06809.1| hypothetical protein OsI_29053 [Oryza sativa Indica Group]
Length = 185
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 88/157 (56%), Gaps = 28/157 (17%)
Query: 34 IPQQEKQPQQQQQETF---HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL 90
PQQ+ + Q+ HVL VDD+ +DR ++ L + +VT V+S +AL +L
Sbjct: 50 FPQQQFKVTLHQKFAMSSPHVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFLD- 108
Query: 91 IDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMS 149
E V++I++DYCMP MTGY+LL +K S + +PVV+
Sbjct: 109 -------------------SEHDVDMIVSDYCMPDMTGYNLLMEVKKSPTLAHLPVVIAF 149
Query: 150 SENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLL 186
S+N+P R+ CL+ GA++++LKPV++ D+ PR++
Sbjct: 150 SDNIPERIRKCLDGGAKDYILKPVKIVDV----PRIM 182
>gi|27260981|dbj|BAC45098.1| putative response regulator [Oryza sativa Japonica Group]
gi|40253364|dbj|BAD05296.1| putative response regulator [Oryza sativa Japonica Group]
gi|71273489|emb|CAI79412.1| Type A response regulator 8 [Oryza sativa Indica Group]
gi|87116396|dbj|BAE79357.1| typeA response regulator 8 [Oryza sativa Japonica Group]
gi|118790867|tpd|FAA00269.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
Length = 121
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 82/139 (58%), Gaps = 25/139 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD+ +DR ++ L + +VT V+S +AL +L
Sbjct: 5 HVLVVDDTHVDRHVVSMALMRHNVRVTAVESVMQALMFL--------------------D 44
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E V++I++DYCMP MTGY+LL +K S +PVV+ SS+N+P R+ CL+ GA+++
Sbjct: 45 SEHDVDMIVSDYCMPDMTGYNLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDY 104
Query: 169 LLKPVRLSDLEKLQPRLLK 187
+LKPV++ D+ PR++K
Sbjct: 105 ILKPVKIVDV----PRIMK 119
>gi|94966174|emb|CAJ29968.1| response regulator [Zea mays]
gi|413922105|gb|AFW62037.1| response regulator [Zea mays]
Length = 124
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 80/138 (57%), Gaps = 24/138 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VD S +D + +L + +VT +ALE+L NNS+
Sbjct: 7 HVLVVDHSRVDCLVASIVLNSFNIRVTVAGGAMEALEFLD-----ANNSH---------- 51
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V+LI+TDYCMP MTGYDLL+ +K S K +PVV+ ++ +P R+ C E GAEE+
Sbjct: 52 ----VDLILTDYCMPDMTGYDLLREVKESPRLKHIPVVITCTDVIPERIIECFEGGAEEY 107
Query: 169 LLKPVRLSDLEKLQPRLL 186
++KP+++SD+ PR+L
Sbjct: 108 MIKPLKVSDV----PRIL 121
>gi|449529114|ref|XP_004171546.1| PREDICTED: two-component response regulator ARR9-like, partial
[Cucumis sativus]
Length = 127
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 78/122 (63%), Gaps = 21/122 (17%)
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNE 197
S WKD+PVVVMSSEN PSR+ MCLEEGAEEFLLKP++LSD++KL+P L KS R + +
Sbjct: 2 SYWKDIPVVVMSSENEPSRINMCLEEGAEEFLLKPLQLSDVKKLEPHLQKSLTRCASDQQ 61
Query: 198 ----------------DSDNDNKNE---TSNYKSSTNSAFSKRKALSAEAPER--RPKMK 236
D +N++K E S ++ N++ SKRKA +AE E RPK+K
Sbjct: 62 IKEQQTTLGIGIGIEIDDENNSKLEESKNSINNNNNNNSMSKRKAATAEHCEERSRPKLK 121
Query: 237 EV 238
E+
Sbjct: 122 EL 123
>gi|37956247|gb|AAP32005.1| putative two-component system response regulator [Populus tremula x
Populus alba]
Length = 74
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
Query: 122 CMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEK 180
CMPGMTGY+LLK++K SS++++PVV+MSSENV +R+ CLEEGAEEF+ KPV+LSD+++
Sbjct: 1 CMPGMTGYELLKKIKESSSFREIPVVIMSSENVMARIDRCLEEGAEEFIAKPVKLSDVKR 60
Query: 181 LQPRLLKS 188
L+ + S
Sbjct: 61 LRDYYMAS 68
>gi|94966176|emb|CAJ29969.1| response regulator [Zea mays]
Length = 124
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/138 (39%), Positives = 79/138 (57%), Gaps = 24/138 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VD S +D + +L + +VT +ALE+L NNS+
Sbjct: 7 HVLVVDHSRVDCLVASIVLNSFNIRVTVAGGAMEALEFLD-----ANNSH---------- 51
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V+LI+TDYCMP MTGYDLL+ +K S K +PVV ++ +P R+ C E GAEE+
Sbjct: 52 ----VDLILTDYCMPDMTGYDLLREVKESPRLKHIPVVXTCTDVIPERIIECFEGGAEEY 107
Query: 169 LLKPVRLSDLEKLQPRLL 186
++KP+++SD+ PR+L
Sbjct: 108 MIKPLKVSDV----PRIL 121
>gi|223942921|gb|ACN25544.1| unknown [Zea mays]
gi|413918402|gb|AFW58334.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 179
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 83/146 (56%), Gaps = 17/146 (11%)
Query: 85 LEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDV 143
+E+LGL D EE V++++TDYCMP MTGYDLLK +K ++ + +
Sbjct: 1 MEFLGLKDG---------------GEEQAVDMVLTDYCMPEMTGYDLLKAIKALNPLEPI 45
Query: 144 PVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQ-PRLLKSPNRSCGNNEDSDND 202
PVVVMSSE+ P R++ CL GAE+F++KP++ D+++L+ P++ E +
Sbjct: 46 PVVVMSSEDEPQRISRCLSAGAEDFIVKPLQSKDVQRLRNCSAAARPSKGAAPCEAAVVA 105
Query: 203 NKNETSNYKSSTNSAFSKRKALSAEA 228
+N+ + + S +R +L+ A
Sbjct: 106 KRNQKPPHPAGAASPSGRRASLAGVA 131
>gi|32479678|emb|CAE02513.1| P0076O17.11 [Oryza sativa Japonica Group]
Length = 108
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/116 (43%), Positives = 72/116 (62%), Gaps = 26/116 (22%)
Query: 51 VLAVDDSLIDRKILENLLRVS----SYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
VL VDDS +DR++++ LL S S+ V VDS KA+E+LGL
Sbjct: 10 VLLVDDSPVDRRVVQLLLSSSACAGSFHVIAVDSAKKAMEFLGL---------------- 53
Query: 107 TKKEESR---VNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVT 158
KEE + +++++TDYCMP MTGY+LLK +K +S K +PV+VMSSEN P R++
Sbjct: 54 --KEEGKEQAIDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRIS 107
>gi|222623065|gb|EEE57197.1| hypothetical protein OsJ_07146 [Oryza sativa Japonica Group]
Length = 158
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 58/70 (82%), Gaps = 1/70 (1%)
Query: 114 VNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKP 172
+++++TDYCMP MTGYDLLK +K + S +PVVVMSSEN P R++ CL GAE+F+LKP
Sbjct: 30 IDIVLTDYCMPEMTGYDLLKAIKALGSPNPIPVVVMSSENEPQRISRCLTAGAEDFILKP 89
Query: 173 VRLSDLEKLQ 182
++++D+++L+
Sbjct: 90 LKMNDVQRLR 99
>gi|413918401|gb|AFW58333.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 170
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 75/120 (62%), Gaps = 2/120 (1%)
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E V++++TDYCMP MTGYDLLK +K ++ + +PVVVMSSE+ P R++ CL GAE+F+
Sbjct: 3 EQAVDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFI 62
Query: 170 LKPVRLSDLEKLQ-PRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRKALSAEA 228
+KP++ D+++L+ P++ E + +N+ + + S +R +L+ A
Sbjct: 63 VKPLQSKDVQRLRNCSAAARPSKGAAPCEAAVVAKRNQKPPHPAGAASPSGRRASLAGVA 122
>gi|413924848|gb|AFW64780.1| hypothetical protein ZEAMMB73_536209 [Zea mays]
Length = 122
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 68/105 (64%), Gaps = 8/105 (7%)
Query: 126 MTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRV--TMCLEEGAEEFLLKPVRLSDLEKLQ 182
M GYDLL+++K SS +D+PVV+MSSEN PSR+ T CLEEGA+E LKPVRLSD+ ++
Sbjct: 1 MPGYDLLRKVKDSSSLRDIPVVIMSSENNPSRINRTRCLEEGADESFLKPVRLSDMSNIK 60
Query: 183 PRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFS----KRKA 223
+LKS R ++ SD+D N S+ N + KRKA
Sbjct: 61 LHILKSRCRE-QHHHQSDSDGDNHGHGCGSAANKSGGDHSRKRKA 104
>gi|413918400|gb|AFW58332.1| hypothetical protein ZEAMMB73_046346 [Zea mays]
Length = 168
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 75/119 (63%), Gaps = 2/119 (1%)
Query: 112 SRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ V++++TDYCMP MTGYDLLK +K ++ + +PVVVMSSE+ P R++ CL GAE+F++
Sbjct: 2 AAVDMVLTDYCMPEMTGYDLLKAIKALNPLEPIPVVVMSSEDEPQRISRCLSAGAEDFIV 61
Query: 171 KPVRLSDLEKLQ-PRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRKALSAEA 228
KP++ D+++L+ P++ E + +N+ + + S +R +L+ A
Sbjct: 62 KPLQSKDVQRLRNCSAAARPSKGAAPCEAAVVAKRNQKPPHPAGAASPSGRRASLAGVA 120
>gi|145514151|ref|XP_001442986.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410347|emb|CAK75589.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 89/174 (51%), Gaps = 28/174 (16%)
Query: 43 QQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASP 102
+Q +E +VL +D+ I R L +LL++ +YQV ++G +A + L
Sbjct: 8 EQAKEVINVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDEL-------------- 53
Query: 103 STLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCL 161
K E+ +LI+ D +P MTG +LL+ +K + KDVPV++MS ++ V CL
Sbjct: 54 -----LKTENEFDLILLDLGLPEMTGLELLQIIKAIDKLKDVPVIMMSGDDETETVAACL 108
Query: 162 EEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTN 215
GAE++++KPV L+ LQ + K P + N+N+NE Y N
Sbjct: 109 NAGAEDYMVKPVNFKKLQGLQTFVKKKPKQR--------NNNQNEKGYYTIVRN 154
>gi|27260986|dbj|BAC45103.1| response regulator-like protein [Oryza sativa Japonica Group]
gi|125603232|gb|EAZ42557.1| hypothetical protein OsJ_27123 [Oryza sativa Japonica Group]
Length = 167
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 56/77 (72%), Gaps = 5/77 (6%)
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E VN+I++DYCMP MTGYDLL +K S +PVV+ SS+N+P R+ CL+ GA++++
Sbjct: 92 EHDVNMIVSDYCMPDMTGYDLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYI 151
Query: 170 LKPVRLSDLEKLQPRLL 186
LKPV++ DL PR+L
Sbjct: 152 LKPVKIVDL----PRIL 164
>gi|125561365|gb|EAZ06813.1| hypothetical protein OsI_29056 [Oryza sativa Indica Group]
Length = 167
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 56/77 (72%), Gaps = 5/77 (6%)
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E VN+I++DYCMP MTGYDLL +K S +PVV+ SS+N+P R+ CL+ GA++++
Sbjct: 92 EHDVNMIVSDYCMPDMTGYDLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGAKDYI 151
Query: 170 LKPVRLSDLEKLQPRLL 186
LKPV++ DL PR+L
Sbjct: 152 LKPVKIVDL----PRIL 164
>gi|302854384|ref|XP_002958700.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
gi|300255940|gb|EFJ40220.1| hypothetical protein VOLCADRAFT_69846 [Volvox carteri f.
nagariensis]
Length = 124
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 76/134 (56%), Gaps = 17/134 (12%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVL V+D + K +E LLR +Y+VTC +G +A++ L + +
Sbjct: 3 FHVLLVEDDRVTLKTVEQLLRKCNYKVTCAANGREAIKVLT----------------ACR 46
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRL-KVSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+V+LI+TD MP +TG+DL+ + ++ DVPVVVMSS++ V + GA +
Sbjct: 47 HSGVKVDLILTDILMPEVTGFDLINEVVHGDTFCDVPVVVMSSQDSQENVLQAFQAGAAD 106
Query: 168 FLLKPVRLSDLEKL 181
+L+KP+R ++L L
Sbjct: 107 YLIKPIRKNELATL 120
>gi|25365080|pir||C84645 hypothetical protein At2g25180 [imported] - Arabidopsis thaliana
Length = 573
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 85/159 (53%), Gaps = 24/159 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD KILE+LLR Y VT + KALE L ++
Sbjct: 19 VLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELL-------------------REN 59
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+++ +L+++D MP M G+ LL+ + + D+PV+++S+ + P V + GA ++LL
Sbjct: 60 KNKFDLVISDVDMPDMDGFKLLELVGLE--MDLPVIMLSAHSDPKYVMKGVTHGACDYLL 117
Query: 171 KPVRLSDLEKLQPRLLKS---PNRSCGNNEDSDNDNKNE 206
KPVR+ +L+ + +++S NR NN D + + NE
Sbjct: 118 KPVRIEELKNIWQHVVRSRFDKNRGSNNNGDKRDGSGNE 156
>gi|240254528|ref|NP_180090.6| response regulator 12 [Arabidopsis thaliana]
gi|378405150|sp|P62598.2|ARR12_ARATH RecName: Full=Two-component response regulator ARR12
gi|330252573|gb|AEC07667.1| response regulator 12 [Arabidopsis thaliana]
Length = 596
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 90/175 (51%), Gaps = 24/175 (13%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD KILE+LLR Y VT + KALE L ++
Sbjct: 19 VLAVDDDQTCLKILESLLRHCQYHVTTTNQAQKALELL-------------------REN 59
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+++ +L+++D MP M G+ LL+ + + D+PV+++S+ + P V + GA ++LL
Sbjct: 60 KNKFDLVISDVDMPDMDGFKLLELVGLE--MDLPVIMLSAHSDPKYVMKGVTHGACDYLL 117
Query: 171 KPVRLSDLEKLQPRLLKS---PNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRK 222
KPVR+ +L+ + +++S NR NN D + + NE N ++++
Sbjct: 118 KPVRIEELKNIWQHVVRSRFDKNRGSNNNGDKRDGSGNEGVGNSDQNNGKGNRKR 172
>gi|357471533|ref|XP_003606051.1| Two-component response regulator ARR9 [Medicago truncatula]
gi|355507106|gb|AES88248.1| Two-component response regulator ARR9 [Medicago truncatula]
Length = 153
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 4/72 (5%)
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNE 197
+S KD+PVV+MSSENVPSR+ CLEEGAEEF LKPV+ SD+ KL+P LLK+ + NE
Sbjct: 79 NSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLKPHLLKTKVK----NE 134
Query: 198 DSDNDNKNETSN 209
D +NK N
Sbjct: 135 DDLINNKRRIHN 146
>gi|297825553|ref|XP_002880659.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
gi|297326498|gb|EFH56918.1| hypothetical protein ARALYDRAFT_481375 [Arabidopsis lyrata subsp.
lyrata]
Length = 611
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 26/176 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD KILE LLR Y VT + KALE L ++
Sbjct: 19 VLAVDDDQTCLKILETLLRHCQYHVTTTNEAQKALELL-------------------REN 59
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+++ +L+++D MP M G+ LL+ + + D+PV+++S+ + P V + GA ++LL
Sbjct: 60 KNKFDLVISDVDMPDMDGFKLLELVGLE--MDLPVIMLSAHSDPKFVMKGVTHGACDYLL 117
Query: 171 KPVRLSDLEKLQPRLLKS---PNRSCGNNEDSDNDNKNETSNYKSSTNS-AFSKRK 222
KPVR+ +L+ + +++S NR NN D + + NE Y N A KRK
Sbjct: 118 KPVRIEELKNIWQHVVRSRFDKNRGS-NNGDKRDGSGNEGVGYSDQNNGRANRKRK 172
>gi|145514664|ref|XP_001443237.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410615|emb|CAK75840.1| unnamed protein product [Paramecium tetraurelia]
Length = 819
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 87/174 (50%), Gaps = 28/174 (16%)
Query: 43 QQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASP 102
+Q +E +VL +D+ I R L +LL++ +YQV ++G +A + L
Sbjct: 8 EQAKEIINVLLAEDAPIQRIALIDLLQLCNYQVVACETGIQARDEL-------------- 53
Query: 103 STLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCL 161
K E+ +LI+ D +P MTG +LL+ +K + KDVPV++MS ++ V CL
Sbjct: 54 -----LKTENEFDLILLDLGLPEMTGLELLQIIKAIDKLKDVPVIMMSGDDETETVAACL 108
Query: 162 EEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTN 215
GAE++++KPV L+ LQ + K P N N+NE Y N
Sbjct: 109 NAGAEDYMVKPVNFKKLQGLQTFVKKKPK--------PRNSNQNEKGYYTIVRN 154
>gi|414586308|tpg|DAA36879.1| TPA: aberrant phyllotaxy1 [Zea mays]
Length = 148
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 20/88 (22%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVLAVDDS +DR ++ +LR S ++VT VDSG +ALE LG
Sbjct: 17 HVLAVDDSSVDRAVIAGILRSSQFRVTAVDSGKRALELLG-------------------- 56
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKV 137
E V++I+TDY MP MTGY+LLK++K
Sbjct: 57 TEPNVSMIITDYWMPEMTGYELLKKIKA 84
>gi|297726345|ref|NP_001175536.1| Os08g0358800 [Oryza sativa Japonica Group]
gi|38637522|dbj|BAD03775.1| putative response regulator [Oryza sativa Japonica Group]
gi|118790937|tpd|FAA00272.1| TPA: A-type response regulator [Oryza sativa Japonica Group]
gi|125603143|gb|EAZ42468.1| hypothetical protein OsJ_27037 [Oryza sativa Japonica Group]
gi|255678389|dbj|BAH94264.1| Os08g0358800 [Oryza sativa Japonica Group]
Length = 135
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 56/77 (72%), Gaps = 5/77 (6%)
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E VN+I++DYCMP MTGYDLL +K S +PV++ SS+N+P R+ C + GA++++
Sbjct: 60 EHDVNMIVSDYCMPEMTGYDLLMEVKKSPRLVHLPVIIASSDNIPERIRKCFDGGAKDYI 119
Query: 170 LKPVRLSDLEKLQPRLL 186
LKPV+++D+ PR+L
Sbjct: 120 LKPVKIADV----PRIL 132
>gi|307109141|gb|EFN57379.1| hypothetical protein CHLNCDRAFT_142774 [Chlorella variabilis]
Length = 998
Score = 79.0 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 80/150 (53%), Gaps = 21/150 (14%)
Query: 35 PQQEKQP--QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID 92
P +++P QQ Q + HVL VDD + R +L +LL Y+VT G +AL L
Sbjct: 32 PLLKRRPSSQQGQPSSCHVLLVDDERLTRTVLSSLLLKCGYRVTSASDGLEALRLL---- 87
Query: 93 NLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSE 151
++P T L++TD CMP + G LL +K ++ + VPVV+MSS
Sbjct: 88 -----RGSAPDTF---------QLVLTDVCMPELNGIQLLSCVKQDANLRAVPVVMMSSV 133
Query: 152 NVPSRVTMCLEEGAEEFLLKPVRLSDLEKL 181
+ V C+++GAEE+L+KPV +++ +
Sbjct: 134 DQEETVAECVQQGAEEYLVKPVTKKEVQHI 163
>gi|222640462|gb|EEE68594.1| hypothetical protein OsJ_27121 [Oryza sativa Japonica Group]
Length = 123
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 58/82 (70%), Gaps = 5/82 (6%)
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGA 165
T E V++I++DYCMP MTGY+LL +K S +PVV+ SS+N+P R+ CL+ GA
Sbjct: 44 TSDTEHDVDMIVSDYCMPDMTGYNLLMEVKKSPKLAHLPVVIASSDNIPERIRKCLDGGA 103
Query: 166 EEFLLKPVRLSDLEKLQPRLLK 187
++++LKPV++ D+ PR++K
Sbjct: 104 KDYILKPVKIVDV----PRIMK 121
>gi|414888254|tpg|DAA64268.1| TPA: hypothetical protein ZEAMMB73_417596 [Zea mays]
Length = 177
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 29/156 (18%)
Query: 42 QQQQQ---------ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID 92
QQQQQ ET +VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 35 QQQQQACWERFLLKETLNVLLVESDDSTRQVVSALLRCCMYQVISAENGQQAWAYL---- 90
Query: 93 NLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSE 151
+ + + ++L++T+ MPG++G LL R+ + K++PV++MSS
Sbjct: 91 ---------------EDKRNNIDLVLTEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSS 135
Query: 152 NVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+ S V CL +GA +FL+KP+R ++L+ L + +
Sbjct: 136 DAMSTVFKCLSKGAVDFLVKPIRKNELKNLWQHVWR 171
>gi|357112782|ref|XP_003558186.1| PREDICTED: two-component response regulator-like PRR73-like
[Brachypodium distachyon]
Length = 766
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 89/189 (47%), Gaps = 40/189 (21%)
Query: 27 REGQLEDIPQQEKQPQQQQQ--------------------ETFHVLAVDDSLIDRKILEN 66
R G ED+P P QQ +T VL V++ R+++
Sbjct: 40 RSGNDEDLPNGHSAPPGAQQINEQKEQQGRVIRWERFLPVKTLRVLLVENDDCTRQVVGA 99
Query: 67 LLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGM 126
LLR Y+V ++G A +YL ++L+N R++L++T+ MP +
Sbjct: 100 LLRKCGYEVISAENGLHAWQYL---EDLQN----------------RIDLVLTEVAMPCL 140
Query: 127 TGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRL 185
+G LL ++ KD+PV++MS + V CL +GA +FL+KP+R ++L+ L +
Sbjct: 141 SGISLLSKIMSHKICKDIPVIMMSKNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHI 200
Query: 186 LKSPNRSCG 194
+ + S G
Sbjct: 201 WRRCHSSSG 209
>gi|384246881|gb|EIE20369.1| CheY-like protein, partial [Coccomyxa subellipsoidea C-169]
Length = 129
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 68/125 (54%), Gaps = 19/125 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L VDD + R ++ NLLR SY+VT SG +ALE L P T S
Sbjct: 6 HILLVDDERLSRVVVGNLLRKCSYKVTEAGSGMEALEIL---------RGQPPGTFS--- 53
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
LI+TD MP + G +LL+ ++ +W ++PV++MS+ V C+ GAE++
Sbjct: 54 ------LILTDVMMPDVDGIELLRHVRGDEAWSNLPVIMMSANERTETVFECIRGGAEDY 107
Query: 169 LLKPV 173
LLKPV
Sbjct: 108 LLKPV 112
>gi|290973017|ref|XP_002669246.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
gi|284082791|gb|EFC36502.1| 3',5'-cyclic-nucleotide phosphodiesterase regA [Naegleria gruberi]
Length = 842
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 19/130 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD + R++L LL +QV V+ G +ALE L ++E
Sbjct: 92 VLVVDDDRVARQVLTKLLEQLGFQVKAVEGGKQALEVL-------------------REE 132
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +L++ D MP M G LLK + + +D+P++++SS P + C + GAE+FL
Sbjct: 133 GNNYHLLLVDVLMPDMDGLQLLKIFRQAYSEDMPIIMVSSSEDPDTINQCFQSGAEDFLQ 192
Query: 171 KPVRLSDLEK 180
KPV+L L++
Sbjct: 193 KPVQLEILKR 202
>gi|326522564|dbj|BAK07744.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 759
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 95/206 (46%), Gaps = 39/206 (18%)
Query: 9 CIPQQEKQQLLENIPQQEREG-QLEDIPQQEKQP------QQQQQE------------TF 49
+ Q L N ++ R G + ED P P +QQQQ+ T
Sbjct: 24 AVENQNGHALKPNEDKEWRGGSKEEDWPSTHSAPPGLDEHKQQQQDRVIRWEKFLPVKTL 83
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
VL V++ R ++ LLR Y+V ++G A +YL + N
Sbjct: 84 RVLLVENDDCTRHVVRALLRKCGYEVISAENGLDAWQYLEDVQN---------------- 127
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
R++L++T+ MP ++G LL ++ S K +PV++MS + S V CL +GA +F
Sbjct: 128 ---RIDLVLTEVAMPCLSGIGLLSKITSHSICKGIPVIMMSKNDSMSTVFKCLSKGAVDF 184
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRSCG 194
L+KP+R ++L+ L + + + S G
Sbjct: 185 LVKPIRKNELKTLWQHIWRRCHSSSG 210
>gi|158513660|sp|A2YQ93.2|PRR37_ORYSI RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
Length = 742
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 81/144 (56%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q++T VL VD R+++ LLR Y+V ++G +A YL ++++N+
Sbjct: 58 QKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL---EDMQNS------- 107
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
++L++T+ MPG++G LL R+ + K++PV++MSS + V CL +
Sbjct: 108 ---------IDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSK 158
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+KP+R ++L+ L + +
Sbjct: 159 GAVDFLVKPIRKNELKNLWQHVWR 182
>gi|115474289|ref|NP_001060743.1| Os07g0695100 [Oryza sativa Japonica Group]
gi|122166891|sp|Q0D3B6.1|PRR37_ORYSJ RecName: Full=Two-component response regulator-like PRR37; AltName:
Full=Pseudo-response regulator 37; Short=OsPRR37
gi|34394035|dbj|BAC84066.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
gi|113612279|dbj|BAF22657.1| Os07g0695100 [Oryza sativa Japonica Group]
Length = 742
Score = 76.3 bits (186), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 81/144 (56%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q++T VL VD R+++ LLR Y+V ++G +A YL ++++N+
Sbjct: 58 QKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL---EDMQNS------- 107
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
++L++T+ MPG++G LL R+ + K++PV++MSS + V CL +
Sbjct: 108 ---------IDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSK 158
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+KP+R ++L+ L + +
Sbjct: 159 GAVDFLVKPIRKNELKNLWQHVWR 182
>gi|51571877|dbj|BAD38855.1| pseudo-response regulator 37 [Oryza sativa Japonica Group]
Length = 742
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 81/144 (56%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q++T VL VD R+++ LLR Y+V ++G +A YL ++++N+
Sbjct: 58 QKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL---EDMQNS------- 107
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
++L++T+ MPG++G LL R+ + K++PV++MSS + V CL +
Sbjct: 108 ---------IDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSK 158
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+KP+R ++L+ L + +
Sbjct: 159 GAVDFLVKPIRKNELKNLWQHVWR 182
>gi|334715199|gb|AEG90655.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 80/144 (55%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q++T +VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 76 QKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL---------------- 119
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
+ +++ +++++ + MPG++G LL R+ + K++PV++MSS + + V CL +
Sbjct: 120 ---EDKQNNIDIVLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSK 176
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+KP+R ++L+ L + +
Sbjct: 177 GAVDFLVKPIRKNELKNLWQHVWR 200
>gi|51571883|dbj|BAD38858.1| pseudo-response regulator 37 [Oryza sativa Indica Group]
Length = 704
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 81/144 (56%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q++T VL VD R+++ LLR Y+V ++G +A YL ++++N+
Sbjct: 58 QKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL---EDMQNS------- 107
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
++L++T+ MPG++G LL R+ + K++PV++MSS + V CL +
Sbjct: 108 ---------IDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSK 158
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+KP+R ++L+ L + +
Sbjct: 159 GAVDFLVKPIRKNELKNLWQHVWR 182
>gi|334715203|gb|AEG90657.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 80/144 (55%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q++T +VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 76 QKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL---------------- 119
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
+ +++ +++++ + MPG++G LL R+ + K++PV++MSS + + V CL +
Sbjct: 120 ---EDKQNNIDIVLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSK 176
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+KP+R ++L+ L + +
Sbjct: 177 GAVDFLVKPIRKNELKNLWQHVWR 200
>gi|334715201|gb|AEG90656.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 80/144 (55%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q++T +VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 76 QKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL---------------- 119
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
+ +++ +++++ + MPG++G LL R+ + K++PV++MSS + + V CL +
Sbjct: 120 ---EDKQNNIDIVLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSK 176
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+KP+R ++L+ L + +
Sbjct: 177 GAVDFLVKPIRKNELKNLWQHVWR 200
>gi|222637749|gb|EEE67881.1| hypothetical protein OsJ_25707 [Oryza sativa Japonica Group]
Length = 661
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 81/144 (56%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q++T VL VD R+++ LLR Y+V ++G +A YL ++++N+
Sbjct: 57 QKKTIKVLLVDSDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL---EDMQNS------- 106
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
++L++T+ MPG++G LL R+ + K++PV++MSS + V CL +
Sbjct: 107 ---------IDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSK 157
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+KP+R ++L+ L + +
Sbjct: 158 GAVDFLVKPIRKNELKNLWQHVWR 181
>gi|224088246|ref|XP_002308388.1| predicted protein [Populus trichocarpa]
gi|222854364|gb|EEE91911.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 87/174 (50%), Gaps = 30/174 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+LAVDD I K+LENLLR Y+VT + ALE L ++
Sbjct: 23 ILAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEML-------------------REN 63
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV+++SS V + GA ++LL
Sbjct: 64 RNKYDLVISDVNMPDMDGFKLLELVGLE--MDLPVIMLSSHGDKEFVYKGVTHGAVDYLL 121
Query: 171 KPVRLSDLEKLQPRLLKSP-------NRSCGNNEDSDNDNKNETSNYKSSTNSA 217
KPVR+ +L+ + +++ NRS N+D +D E +ST SA
Sbjct: 122 KPVRMEELKNIWQHVIRRKKWYPEDQNRSP--NQDKGDDGAGEGEQGVTSTGSA 173
>gi|308913674|gb|ADO51647.1| PRR59 [Zea mays]
Length = 695
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 20/164 (12%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
+ + VL V+ R+I+ LLR Y+V V G KA E +
Sbjct: 50 RRSLRVLLVEHDDSTRQIVTALLRKCGYRVAAVADGMKAWEVM----------------- 92
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEG 164
++ +L++T+ MP ++G LL R+ ++ K++PV++MSS++ V C+++G
Sbjct: 93 --RERAYDFDLVLTEVAMPSLSGIQLLSRIAAAAECKNIPVIMMSSQDSIGTVLKCMQKG 150
Query: 165 AEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETS 208
A +FL+KPVR ++L L + + +C N +N N S
Sbjct: 151 AVDFLVKPVRKNELGNLWQHVWRRHAMNCQTNGSENNAASNHVS 194
>gi|334715189|gb|AEG90650.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 761
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 79/144 (54%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q++T +VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 76 QKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL---------------- 119
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
+ +++ +++++ + MPG++G LL R+ + K++PV++MSS + + V CL +
Sbjct: 120 ---EDKQNNIDIVLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSK 176
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+ P+R ++L+ L + +
Sbjct: 177 GAVDFLVNPIRKNELKNLWQHVWR 200
>gi|334715193|gb|AEG90652.1| pseudo-response regulator 37 splice variant c [Sorghum bicolor]
Length = 759
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 79/144 (54%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q++T +VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 76 QKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL---------------- 119
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
+ +++ +++++ + MPG++G LL R+ + K++PV++MSS + + V CL +
Sbjct: 120 ---EDKQNNIDIVLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSK 176
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+ P+R ++L+ L + +
Sbjct: 177 GAVDFLVNPIRKNELKNLWQHVWR 200
>gi|334715191|gb|AEG90651.1| pseudo-response regulator 37 splice variant b [Sorghum bicolor]
Length = 775
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 79/144 (54%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q++T +VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 76 QKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL---------------- 119
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
+ +++ +++++ + MPG++G LL R+ + K++PV++MSS + + V CL +
Sbjct: 120 ---EDKQNNIDIVLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSK 176
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+ P+R ++L+ L + +
Sbjct: 177 GAVDFLVNPIRKNELKNLWQHVWR 200
>gi|84570631|dbj|BAE72700.1| pseudo-response regulator 37 homologue [Lemna gibba]
Length = 623
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 77/142 (54%), Gaps = 20/142 (14%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
++ VL V++ R ++ LLR SY+VT V +G LE ++NL NN
Sbjct: 75 KSLKVLLVENDDSTRHVVNALLRNCSYEVTAVANG---LEAWKFLENLSNN--------- 122
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGA 165
V++++T+ MP +TG LL ++ + K +PV++MSS + V CL +GA
Sbjct: 123 -------VDIVLTEVVMPSLTGIGLLDKIMSHMTLKTIPVIMMSSHDSMGIVFKCLSKGA 175
Query: 166 EEFLLKPVRLSDLEKLQPRLLK 187
+FL+KP+R ++L+ L + +
Sbjct: 176 VDFLVKPIRKNELKNLWQHVWR 197
>gi|218200317|gb|EEC82744.1| hypothetical protein OsI_27455 [Oryza sativa Indica Group]
Length = 507
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 81/144 (56%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q++T VL V+ R+++ LLR Y+V ++G +A YL ++++N+
Sbjct: 57 QKKTIKVLLVESDDSTRQVVSALLRHCMYEVIPAENGQQAWTYL---EDMQNS------- 106
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
++L++T+ MPG++G LL R+ + K++PV++MSS + V CL +
Sbjct: 107 ---------IDLVLTEVVMPGVSGISLLSRIMNHNICKNIPVIMMSSNDAMGTVFKCLSK 157
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+KP+R ++L+ L + +
Sbjct: 158 GAVDFLVKPIRKNELKNLWQHVWR 181
>gi|238011048|gb|ACR36559.1| unknown [Zea mays]
Length = 154
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 10/93 (10%)
Query: 123 MPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKL 181
MP MTGYDLLK +K +SS +PVVVMSSEN P R++ CL GAE+F+LKP++ D+++L
Sbjct: 1 MPEMTGYDLLKAIKALSSPNPIPVVVMSSENEPQRISRCLTAGAEDFILKPLKTKDVQRL 60
Query: 182 QPRLLKSPNRSCGNNEDSDNDNKNETSNYKSST 214
R+C + +D ++ + + S+
Sbjct: 61 ---------RNCSSAARPRDDAAHQCESLRRSS 84
>gi|357417568|ref|YP_004930588.1| RpfC protein [Pseudoxanthomonas spadix BD-a59]
gi|355335146|gb|AER56547.1| RpfC protein [Pseudoxanthomonas spadix BD-a59]
Length = 742
Score = 73.6 bits (179), Expect = 7e-11, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 42/169 (24%)
Query: 31 LEDIPQQEKQPQ------------------QQQQETFHVLAVDDSLIDRKILENLLRVSS 72
LE+ Q E QPQ + + H+L DD +R +L+ LL+ +
Sbjct: 438 LEEQTQAEVQPQHLGTAENVIAFSDPFLRHRARVRCMHILVADDHQANRMVLQRLLQKAG 497
Query: 73 YQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLL 132
++V+CV+ G+ L+ + + D + ++ D MPGM+G DLL
Sbjct: 498 HRVSCVNGGEDVLDAMAMSD---------------------YDAVIIDLHMPGMSGLDLL 536
Query: 133 KRLKVSSWKD---VPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDL 178
K L+V PV+V+S++ P ++ C + GA FL KPV S L
Sbjct: 537 KELRVMQAGGGPITPVMVLSADVTPESISRCEQAGAYAFLAKPVAASKL 585
>gi|390992972|ref|ZP_10263178.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372552287|emb|CCF70153.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 721
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 69/135 (51%), Gaps = 24/135 (17%)
Query: 42 QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
+ + T +L DD +R +L+ LL+ + ++VTCVD G++ L+ L
Sbjct: 451 HRARVRTLQILVADDHAANRMVLQRLLQKAGHKVTCVDGGEQVLDTL------------- 497
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVT 158
++ ++ + D MPG++G DLLK+L+V S PVVV+S++ P +
Sbjct: 498 --------ADADFDVAIVDLHMPGVSGLDLLKQLRVMQAGSQPRTPVVVLSADVTPEAIR 549
Query: 159 MCLEEGAEEFLLKPV 173
C + GA FL KPV
Sbjct: 550 SCEQAGAYAFLAKPV 564
>gi|334715197|gb|AEG90654.1| pseudo-response regulator 37 splice variant a [Sorghum bicolor]
Length = 291
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 79/144 (54%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q++T +VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 76 QKKTINVLLVESDDCTRRVVSALLRHCMYQVISAENGQQAWNYL---------------- 119
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
+ +++ +++++ + MPG++G LL R+ + K++PV++MSS + + V CL +
Sbjct: 120 ---EDKQNNIDIVLIEVFMPGVSGISLLSRIMSHNICKNIPVIMMSSNDARNTVFKCLSK 176
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+ P+R ++L+ L + +
Sbjct: 177 GAVDFLVNPIRKNELKNLWQHVWR 200
>gi|456735763|gb|EMF60489.1| Sensory/regulatory protein rpfC [Stenotrophomonas maltophilia EPM1]
Length = 910
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 24/129 (18%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL DD +R +L+ LL + ++VTCV+ G + L+ L
Sbjct: 646 SLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL------------------- 686
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E++ + + D MPGM+G DLLK+L+V S VPV+V+S++ P + C + G
Sbjct: 687 --EQASYDAAIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAG 744
Query: 165 AEEFLLKPV 173
A FL KPV
Sbjct: 745 ARAFLAKPV 753
>gi|408822682|ref|ZP_11207572.1| histidine kinase/response regulator fusion protein, regulation of
pathogenicity factors [Pseudomonas geniculata N1]
Length = 910
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 24/129 (18%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL DD +R +L+ LL + ++VTCV+ G + L+ L
Sbjct: 646 SLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL------------------- 686
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E++ + + D MPGM+G DLLK+L+V S VPV+V+S++ P + C + G
Sbjct: 687 --EQASYDAAIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAG 744
Query: 165 AEEFLLKPV 173
A FL KPV
Sbjct: 745 ARAFLAKPV 753
>gi|424668616|ref|ZP_18105641.1| hypothetical protein A1OC_02213 [Stenotrophomonas maltophilia
Ab55555]
gi|401068878|gb|EJP77402.1| hypothetical protein A1OC_02213 [Stenotrophomonas maltophilia
Ab55555]
Length = 907
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 24/129 (18%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL DD +R +L+ LL + ++VTCV+ G + L+ L
Sbjct: 643 SLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL------------------- 683
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E++ + + D MPGM+G DLLK+L+V S VPV+V+S++ P + C + G
Sbjct: 684 --EQASYDAAIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAG 741
Query: 165 AEEFLLKPV 173
A FL KPV
Sbjct: 742 ARAFLAKPV 750
>gi|254521065|ref|ZP_05133120.1| sensory/regulatory protein RpfC [Stenotrophomonas sp. SKA14]
gi|219718656|gb|EED37181.1| sensory/regulatory protein RpfC [Stenotrophomonas sp. SKA14]
Length = 910
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 24/129 (18%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL DD +R +L+ LL + ++VTCV+ G + L+ L
Sbjct: 646 SLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL------------------- 686
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E++ + + D MPGM+G DLLK+L+V S VPV+V+S++ P + C + G
Sbjct: 687 --EQASYDAAIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAG 744
Query: 165 AEEFLLKPV 173
A FL KPV
Sbjct: 745 ARAFLAKPV 753
>gi|190574186|ref|YP_001972031.1| histidine kinase/response regulator fusion protein, regulation of
pathogenicity factors [Stenotrophomonas maltophilia
K279a]
gi|190012108|emb|CAQ45731.1| putative histidine kinase/response regulator fusion protein,
regulation of pathogenicity factors [Stenotrophomonas
maltophilia K279a]
Length = 883
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 24/129 (18%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL DD +R +L+ LL + ++VTCV+ G + L+ L
Sbjct: 619 SLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL------------------- 659
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E++ + + D MPGM+G DLLK+L+V S VPV+V+S++ P + C + G
Sbjct: 660 --EQASYDAAIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPESILRCEQAG 717
Query: 165 AEEFLLKPV 173
A FL KPV
Sbjct: 718 ARAFLAKPV 726
>gi|194365606|ref|YP_002028216.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
R551-3]
gi|194348410|gb|ACF51533.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
R551-3]
Length = 907
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 66/129 (51%), Gaps = 24/129 (18%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL DD +R +L+ LL + ++VTCV+ G + L+ L
Sbjct: 643 SLRVLVADDHEANRMVLQRLLEKAGHKVTCVNGGAEVLDAL------------------- 683
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E++ + + D MPGM+G DLLK+L+V S VPV+V+S++ P + C + G
Sbjct: 684 --EQASYDAAIVDLHMPGMSGLDLLKQLRVMQASGMPYVPVMVLSADVTPDSILRCEQAG 741
Query: 165 AEEFLLKPV 173
A FL KPV
Sbjct: 742 ARAFLAKPV 750
>gi|308067232|ref|YP_003868837.1| regulator of cell autolysis [Paenibacillus polymyxa E681]
gi|305856511|gb|ADM68299.1| Putative regulator of cell autolysis [Paenibacillus polymyxa E681]
Length = 1039
Score = 73.2 bits (178), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/153 (29%), Positives = 79/153 (51%), Gaps = 24/153 (15%)
Query: 34 IPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDN 93
I +E +Q Q + VLAVDD ++ ++LE LL + V VD ++AL L
Sbjct: 690 ILHEEDALEQVQTVPYKVLAVDDDEVNLRVLEELLYTTGCSVVAVDHAEEALHML----- 744
Query: 94 LENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSEN 152
+R +L++TD+ MP M+G +L +R++ S ++PV+++++ +
Sbjct: 745 ---------------NGRTRFDLVITDWMMPEMSGIELCRRIRERYSLSELPVLLLTARD 789
Query: 153 VPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRL 185
+P + GA +FL KPV D E+L+ R+
Sbjct: 790 LPGDIRAGFMAGANDFLRKPV---DAEELKARV 819
>gi|159154677|gb|ABW93666.1| pseudo-response regulator [Triticum turgidum]
gi|159154679|gb|ABW93667.1| pseudo-response regulator [Triticum turgidum]
gi|159154681|gb|ABW93668.1| pseudo-response regulator [Triticum turgidum]
gi|379025480|dbj|BAL63517.1| pseudo-response regulator [Triticum turanicum]
gi|379025484|dbj|BAL63519.1| pseudo-response regulator [Triticum turanicum]
gi|379025486|dbj|BAL63520.1| pseudo-response regulator [Triticum turanicum]
gi|379025566|dbj|BAL63560.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025644|dbj|BAL63599.1| pseudo-response regulator [Triticum durum]
gi|379025646|dbj|BAL63600.1| pseudo-response regulator [Triticum durum]
gi|379025648|dbj|BAL63601.1| pseudo-response regulator [Triticum durum]
gi|379025650|dbj|BAL63602.1| pseudo-response regulator [Triticum durum]
gi|379025652|dbj|BAL63603.1| pseudo-response regulator [Triticum durum]
gi|379025654|dbj|BAL63604.1| pseudo-response regulator [Triticum durum]
gi|379025656|dbj|BAL63605.1| pseudo-response regulator [Triticum durum]
gi|379025658|dbj|BAL63606.1| pseudo-response regulator [Triticum durum]
gi|379025660|dbj|BAL63607.1| pseudo-response regulator [Triticum durum]
gi|379025662|dbj|BAL63608.1| pseudo-response regulator [Triticum durum]
gi|379025664|dbj|BAL63609.1| pseudo-response regulator [Triticum durum]
gi|379025666|dbj|BAL63610.1| pseudo-response regulator [Triticum durum]
gi|379025668|dbj|BAL63611.1| pseudo-response regulator [Triticum durum]
gi|379025670|dbj|BAL63612.1| pseudo-response regulator [Triticum durum]
gi|379025672|dbj|BAL63613.1| pseudo-response regulator [Triticum durum]
gi|379025674|dbj|BAL63614.1| pseudo-response regulator [Triticum durum]
gi|379025676|dbj|BAL63615.1| pseudo-response regulator [Triticum durum]
gi|379025678|dbj|BAL63616.1| pseudo-response regulator [Triticum durum]
gi|379025680|dbj|BAL63617.1| pseudo-response regulator [Triticum durum]
gi|379025684|dbj|BAL63619.1| pseudo-response regulator [Triticum durum]
gi|379025686|dbj|BAL63620.1| pseudo-response regulator [Triticum durum]
gi|379025688|dbj|BAL63621.1| pseudo-response regulator [Triticum durum]
gi|379025690|dbj|BAL63622.1| pseudo-response regulator [Triticum durum]
gi|379025692|dbj|BAL63623.1| pseudo-response regulator [Triticum durum]
gi|379025694|dbj|BAL63624.1| pseudo-response regulator [Triticum durum]
gi|379025696|dbj|BAL63625.1| pseudo-response regulator [Triticum durum]
gi|379026082|dbj|BAL63818.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA EFL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELKNLWAHVWR 159
>gi|242067499|ref|XP_002449026.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
gi|241934869|gb|EES08014.1| hypothetical protein SORBIDRAFT_05g003660 [Sorghum bicolor]
Length = 697
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 79/164 (48%), Gaps = 20/164 (12%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
+ + VL V+ R+++ LLR Y+V V G KA E +
Sbjct: 52 RRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVM----------------- 94
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEG 164
+ +L++T+ MP ++G LL R+ + K++PV++MSS++ V C+++G
Sbjct: 95 --RGRAYAFDLVLTEVAMPSLSGIQLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQKG 152
Query: 165 AEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETS 208
A +FL+KPVR ++L L + + +C N +N N S
Sbjct: 153 AVDFLVKPVRKNELRNLWQHVWRRHAMNCQTNGSENNAASNHIS 196
>gi|159487595|ref|XP_001701808.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
gi|158281027|gb|EDP06783.1| response regulator of potential two component system [Chlamydomonas
reinhardtii]
Length = 610
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 89/194 (45%), Gaps = 43/194 (22%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHV+ V+D I K++E LLR SY+V+ G AL+ L K
Sbjct: 6 FHVVLVEDDNICLKVVEQLLRKLSYRVSTASDGAAALKVL----------------ADCK 49
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVV--------------------- 146
+ +V+LI+TD MP +TG+DL+ + ++ D+PVV
Sbjct: 50 QRGDKVDLILTDILMPEVTGFDLINEVVHGETFADIPVVASGTFLGFGRRTVRTVAWSRC 109
Query: 147 -VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD---ND 202
VMSS++ V + GA ++L+KP+R ++L L + ++ NR+ G S
Sbjct: 110 QVMSSQDSQESVLQAFQAGAADYLIKPIRKNELATLWQHVWRA-NRAKGGQTSSGAAHGS 168
Query: 203 NKNETSNYKSSTNS 216
+ N +N+ ++
Sbjct: 169 SANGPANHGAAGTG 182
>gi|310639938|ref|YP_003944696.1| sensor protein [Paenibacillus polymyxa SC2]
gi|309244888|gb|ADO54455.1| Sensor protein [Paenibacillus polymyxa SC2]
Length = 1046
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 80/152 (52%), Gaps = 24/152 (15%)
Query: 35 PQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNL 94
P +E +Q + + VLAVDD ++ ++LE LL + V VD ++AL+ L
Sbjct: 699 PLEEDGLEQVRNVPYRVLAVDDDGVNLRVLEELLYATGCSVVAVDHAEEALQLL------ 752
Query: 95 ENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENV 153
+R +L++TD+ MP M+G +L +R++ S ++PV+++++ ++
Sbjct: 753 --------------NGRARFDLVITDWMMPEMSGIELCRRIREGYSLSELPVLLLTARDL 798
Query: 154 PSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRL 185
P + GA +FL KPV D E+L+ R+
Sbjct: 799 PGDIHAGFMAGANDFLRKPV---DAEELKARV 827
>gi|118638624|gb|ABL09468.1| pseudo-response regulator [Triticum aestivum]
gi|383215296|gb|AFG73161.1| pseudo-response regulator [Triticum aestivum]
gi|383215297|gb|AFG73162.1| pseudo-response regulator [Triticum aestivum]
gi|383215298|gb|AFG73163.1| pseudo-response regulator [Triticum aestivum]
Length = 664
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS N V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|65329070|gb|AAY42110.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|65329087|gb|AAY42111.1| pseudo-response regulator PPD-H1 [Hordeum vulgare]
gi|65329107|gb|AAY42112.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030976|gb|ACL78653.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030978|gb|ACL78654.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030994|gb|ACL78662.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|145351734|ref|XP_001420222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580455|gb|ABO98515.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 145
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 21/125 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD I R + +LLR Y+VT +SG++ALE L +
Sbjct: 24 HVLVVDDERICRTVTSSLLRKCGYRVTTAESGEEALELL--------------------R 63
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ +L++TD MPG+ G LL+ ++ +D+PV++MS+ V C++ GAE++
Sbjct: 64 RGTEFHLLLTDVMMPGIDGPALLQIVRNDERLRDMPVIMMSANEHSDTVFRCIQYGAEDY 123
Query: 169 LLKPV 173
LLKPV
Sbjct: 124 LLKPV 128
>gi|220030962|gb|ACL78646.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031046|gb|ACL78688.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031084|gb|ACL78707.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031092|gb|ACL78711.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031116|gb|ACL78723.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031118|gb|ACL78724.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031120|gb|ACL78725.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031122|gb|ACL78726.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031124|gb|ACL78727.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031126|gb|ACL78728.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031128|gb|ACL78729.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031130|gb|ACL78730.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031132|gb|ACL78731.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031134|gb|ACL78732.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031152|gb|ACL78741.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031154|gb|ACL78742.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031196|gb|ACL78763.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031200|gb|ACL78765.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031202|gb|ACL78766.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030964|gb|ACL78647.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030866|gb|ACL78598.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030868|gb|ACL78599.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030872|gb|ACL78601.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030878|gb|ACL78604.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030940|gb|ACL78635.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031062|gb|ACL78696.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030958|gb|ACL78644.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030862|gb|ACL78596.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031064|gb|ACL78697.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030858|gb|ACL78594.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|62868803|gb|AAY17586.1| pseudo-response regulator [Hordeum vulgare subsp. vulgare]
Length = 674
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031158|gb|ACL78744.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031050|gb|ACL78690.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031058|gb|ACL78694.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031066|gb|ACL78698.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031068|gb|ACL78699.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031070|gb|ACL78700.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031076|gb|ACL78703.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031078|gb|ACL78704.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031094|gb|ACL78712.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031096|gb|ACL78713.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031100|gb|ACL78715.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031102|gb|ACL78716.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031104|gb|ACL78717.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031106|gb|ACL78718.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031108|gb|ACL78719.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031112|gb|ACL78721.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031136|gb|ACL78733.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031146|gb|ACL78738.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031148|gb|ACL78739.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031150|gb|ACL78740.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031156|gb|ACL78743.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031160|gb|ACL78745.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031162|gb|ACL78746.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031180|gb|ACL78755.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031198|gb|ACL78764.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030860|gb|ACL78595.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031184|gb|ACL78757.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030692|gb|ACL78511.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030696|gb|ACL78513.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030698|gb|ACL78514.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030704|gb|ACL78517.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030708|gb|ACL78519.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030722|gb|ACL78526.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030724|gb|ACL78527.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030728|gb|ACL78529.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030730|gb|ACL78530.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030734|gb|ACL78532.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030736|gb|ACL78533.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030738|gb|ACL78534.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030740|gb|ACL78535.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030742|gb|ACL78536.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030744|gb|ACL78537.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030748|gb|ACL78539.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030750|gb|ACL78540.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030752|gb|ACL78541.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030754|gb|ACL78542.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030758|gb|ACL78544.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030760|gb|ACL78545.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030762|gb|ACL78546.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030764|gb|ACL78547.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030766|gb|ACL78548.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030772|gb|ACL78551.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030774|gb|ACL78552.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030776|gb|ACL78553.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030778|gb|ACL78554.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030782|gb|ACL78556.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030784|gb|ACL78557.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030786|gb|ACL78558.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030788|gb|ACL78559.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030792|gb|ACL78561.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030794|gb|ACL78562.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030796|gb|ACL78563.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030798|gb|ACL78564.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030802|gb|ACL78566.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030804|gb|ACL78567.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030806|gb|ACL78568.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030808|gb|ACL78569.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030810|gb|ACL78570.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030820|gb|ACL78575.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030822|gb|ACL78576.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030824|gb|ACL78577.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030828|gb|ACL78579.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030830|gb|ACL78580.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030832|gb|ACL78581.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030834|gb|ACL78582.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030838|gb|ACL78584.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030846|gb|ACL78588.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030850|gb|ACL78590.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030894|gb|ACL78612.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030726|gb|ACL78528.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030706|gb|ACL78518.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031172|gb|ACL78751.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031018|gb|ACL78674.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031026|gb|ACL78678.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031028|gb|ACL78679.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030956|gb|ACL78643.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030864|gb|ACL78597.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030984|gb|ACL78657.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030986|gb|ACL78658.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030992|gb|ACL78661.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030998|gb|ACL78664.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031000|gb|ACL78665.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031002|gb|ACL78666.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031004|gb|ACL78667.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031006|gb|ACL78668.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031008|gb|ACL78669.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031010|gb|ACL78670.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031012|gb|ACL78671.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030676|gb|ACL78503.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030680|gb|ACL78505.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030694|gb|ACL78512.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030842|gb|ACL78586.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030848|gb|ACL78589.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031098|gb|ACL78714.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031042|gb|ACL78686.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030948|gb|ACL78639.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030884|gb|ACL78607.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030908|gb|ACL78619.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030856|gb|ACL78593.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030870|gb|ACL78600.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030876|gb|ACL78603.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030898|gb|ACL78614.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030938|gb|ACL78634.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030944|gb|ACL78637.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030968|gb|ACL78649.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030980|gb|ACL78655.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030982|gb|ACL78656.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030988|gb|ACL78659.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030990|gb|ACL78660.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030854|gb|ACL78592.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030678|gb|ACL78504.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030682|gb|ACL78506.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030684|gb|ACL78507.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030712|gb|ACL78521.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030780|gb|ACL78555.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030836|gb|ACL78583.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030840|gb|ACL78585.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|65329125|gb|AAY42113.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp.
spontaneum]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031090|gb|ACL78710.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031114|gb|ACL78722.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031168|gb|ACL78749.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031170|gb|ACL78750.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031190|gb|ACL78760.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031192|gb|ACL78761.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031194|gb|ACL78762.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030960|gb|ACL78645.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|65329050|gb|AAY42109.1| pseudo-response regulator PPD-H1 [Hordeum vulgare subsp. vulgare]
gi|220030874|gb|ACL78602.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030916|gb|ACL78623.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031014|gb|ACL78672.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030966|gb|ACL78648.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030926|gb|ACL78628.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030952|gb|ACL78641.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031038|gb|ACL78684.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030918|gb|ACL78624.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030934|gb|ACL78632.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030996|gb|ACL78663.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031044|gb|ACL78687.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031072|gb|ACL78701.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031074|gb|ACL78702.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031080|gb|ACL78705.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031082|gb|ACL78706.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031086|gb|ACL78708.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031088|gb|ACL78709.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031110|gb|ACL78720.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031138|gb|ACL78734.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031140|gb|ACL78735.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031142|gb|ACL78736.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031144|gb|ACL78737.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031164|gb|ACL78747.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031166|gb|ACL78748.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031176|gb|ACL78753.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031178|gb|ACL78754.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031182|gb|ACL78756.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031186|gb|ACL78758.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220031188|gb|ACL78759.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030888|gb|ACL78609.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030790|gb|ACL78560.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030942|gb|ACL78636.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030672|gb|ACL78501.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030674|gb|ACL78502.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030686|gb|ACL78508.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030688|gb|ACL78509.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030690|gb|ACL78510.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030700|gb|ACL78515.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030702|gb|ACL78516.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030710|gb|ACL78520.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030714|gb|ACL78522.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030716|gb|ACL78523.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030718|gb|ACL78524.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030720|gb|ACL78525.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030732|gb|ACL78531.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030746|gb|ACL78538.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030756|gb|ACL78543.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030768|gb|ACL78549.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030770|gb|ACL78550.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030800|gb|ACL78565.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030812|gb|ACL78571.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030814|gb|ACL78572.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030816|gb|ACL78573.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030818|gb|ACL78574.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030826|gb|ACL78578.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030844|gb|ACL78587.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
gi|220030852|gb|ACL78591.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031174|gb|ACL78752.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030954|gb|ACL78642.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030930|gb|ACL78630.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030932|gb|ACL78631.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030946|gb|ACL78638.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030950|gb|ACL78640.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030890|gb|ACL78610.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031034|gb|ACL78682.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031048|gb|ACL78689.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031054|gb|ACL78692.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030936|gb|ACL78633.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 675
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030924|gb|ACL78627.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030974|gb|ACL78652.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 672
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLSRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030910|gb|ACL78620.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031060|gb|ACL78695.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031040|gb|ACL78685.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 673
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030912|gb|ACL78621.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030914|gb|ACL78622.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 676
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031022|gb|ACL78676.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030902|gb|ACL78616.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030904|gb|ACL78617.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030922|gb|ACL78626.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030972|gb|ACL78651.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030886|gb|ACL78608.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030892|gb|ACL78611.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030900|gb|ACL78615.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031030|gb|ACL78680.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031036|gb|ACL78683.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031052|gb|ACL78691.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031056|gb|ACL78693.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030906|gb|ACL78618.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030928|gb|ACL78629.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030882|gb|ACL78606.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030896|gb|ACL78613.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220030920|gb|ACL78625.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031032|gb|ACL78681.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220030880|gb|ACL78605.1| pseudo-response receiver [Hordeum vulgare subsp. vulgare]
Length = 677
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|456359110|dbj|BAM93384.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 83/170 (48%), Gaps = 27/170 (15%)
Query: 26 EREGQLEDIPQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVD 79
+R Q PQ E Q + ++T VL V+ R+++ LLR YQV +
Sbjct: 2 DRHHQQPPSPQGEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAE 61
Query: 80 SGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKV 137
+G +A YL + +S ++L++T+ M G++G DLL R +
Sbjct: 62 NGHQAWAYL-------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNH 102
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
KD+PV++MSS ++ V CL GA +FL KP+R ++L+ L + +
Sbjct: 103 EVCKDIPVIMMSSHDLMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 152
>gi|220030970|gb|ACL78650.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|220031016|gb|ACL78673.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031020|gb|ACL78675.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
gi|220031024|gb|ACL78677.1| pseudo-response receiver [Hordeum vulgare subsp. spontaneum]
Length = 677
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV V++G +A YL
Sbjct: 39 HRKTIRVLLVETDDSTRQVVAALLRHCMYQVIPVENGHQAWAYL---------------- 82
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 83 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 139
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 140 NGAADFLAKPIRKNELKNLWAHVWR 164
>gi|192293028|ref|YP_001993633.1| Fis family transcriptional regulator [Rhodopseudomonas palustris
TIE-1]
gi|192286777|gb|ACF03158.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris TIE-1]
Length = 495
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ VDSGD A+E L T +
Sbjct: 5 ILIADDDAVQRRLVENMVQKCGYEAVSVDSGDAAVEAL------------------TAPD 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ ++ D MPG+ G +L +++ S DVPV+V ++ V + GA +F++
Sbjct: 47 APAIDAVVLDLVMPGLDGLGVLSKIRASGL-DVPVIVQTAHGGIDNVVSAMRAGAHDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNASAMKGE 129
>gi|39937247|ref|NP_949523.1| Fis family transcriptional regulator [Rhodopseudomonas palustris
CGA009]
gi|39651105|emb|CAE29628.1| two component sigma-54-dependent transcriptional regulator, Fis
family [Rhodopseudomonas palustris CGA009]
Length = 495
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ VDSGD A+E L T +
Sbjct: 5 ILIADDDAVQRRLVENMVQKCGYEAVSVDSGDAAVEAL------------------TAPD 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ ++ D MPG+ G +L +++ S DVPV+V ++ V + GA +F++
Sbjct: 47 APAIDAVVLDLVMPGLDGLGVLSKIRASGL-DVPVIVQTAHGGIDNVVSAMRAGAHDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNASAMKGE 129
>gi|84570625|dbj|BAE72697.1| pseudo-response regulator 37 homologue [Lemna paucicostata]
Length = 617
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 76/138 (55%), Gaps = 20/138 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V++ R ++ LLR SY+VT V +G LE +++NL NN
Sbjct: 79 VLLVENDDSTRHVVNALLRNCSYEVTAVANG---LEAWKVLENLSNN------------- 122
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
V++++T+ MP ++G LL ++ + K +PV++MSS + V CL +GA +FL
Sbjct: 123 ---VDIVLTEVVMPSLSGIGLLDKIMSHITLKTIPVIMMSSHDSMGIVFKCLSKGAVDFL 179
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KP+R ++L+ L + +
Sbjct: 180 VKPIRKNELKNLWQHVWR 197
>gi|118638626|gb|ABL09469.1| truncated pseudo-response regulator [Triticum aestivum]
gi|383215295|gb|AFG73160.1| pseudo-response regulator [Triticum aestivum]
Length = 432
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS N V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHNSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|298103722|emb|CBM42562.1| putative B-type response regulator 19 [Populus x canadensis]
Length = 685
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD I K+LENLLR Y+VT + ALE L ++
Sbjct: 23 VLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEML-------------------REN 63
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV+++SS V + GA ++LL
Sbjct: 64 RNKYDLVISDVNMPDMDGFKLLELVGLE--MDLPVIMLSSHGDKEFVYKGITHGAVDYLL 121
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVRL +L+ + +++
Sbjct: 122 KPVRLEELKNIWQHVIR 138
>gi|226505594|ref|NP_001146641.1| uncharacterized protein LOC100280240 [Zea mays]
gi|219888151|gb|ACL54450.1| unknown [Zea mays]
gi|323388721|gb|ADX60165.1| PseuodARR-B transcription factor [Zea mays]
gi|413956104|gb|AFW88753.1| two-component response regulator-like PRR73 [Zea mays]
Length = 766
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 81/149 (54%), Gaps = 20/149 (13%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
+T VL V++ R+++ LLR Y+V ++G A YL ++L+NN
Sbjct: 81 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL---EDLQNN--------- 128
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGA 165
++L++T+ MP ++G LL ++ KD+PV++MS+ + S V CL +GA
Sbjct: 129 -------IDLVLTEVFMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGA 181
Query: 166 EEFLLKPVRLSDLEKLQPRLLKSPNRSCG 194
+FL+KP+R ++L+ L + + + S G
Sbjct: 182 VDFLVKPLRKNELKNLWQHVWRRCHSSSG 210
>gi|224143990|ref|XP_002325148.1| type-b response regulator [Populus trichocarpa]
gi|222866582|gb|EEF03713.1| type-b response regulator [Populus trichocarpa]
Length = 707
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD I K+LENLLR Y+VT + ALE L ++
Sbjct: 23 VLAVDDDPICLKVLENLLRKCQYEVTTTNQAVTALEML-------------------REN 63
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV+++SS V + GA ++LL
Sbjct: 64 RNKYDLVISDVNMPDMDGFKLLELVGLE--MDLPVIMLSSHGDKEFVFKGITHGAVDYLL 121
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVRL +L+ + +++
Sbjct: 122 KPVRLEELKNIWQHVIR 138
>gi|379025542|dbj|BAL63548.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PVV
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVV 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|379025744|dbj|BAL63649.1| pseudo-response regulator [Triticum durum]
gi|379025748|dbj|BAL63651.1| pseudo-response regulator [Triticum durum]
gi|379025762|dbj|BAL63658.1| pseudo-response regulator [Triticum durum]
gi|379025764|dbj|BAL63659.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|379025742|dbj|BAL63648.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|379025736|dbj|BAL63645.1| pseudo-response regulator [Triticum durum]
gi|379025738|dbj|BAL63646.1| pseudo-response regulator [Triticum durum]
gi|379025740|dbj|BAL63647.1| pseudo-response regulator [Triticum durum]
gi|379025746|dbj|BAL63650.1| pseudo-response regulator [Triticum durum]
gi|379025750|dbj|BAL63652.1| pseudo-response regulator [Triticum durum]
gi|379025752|dbj|BAL63653.1| pseudo-response regulator [Triticum durum]
gi|379025754|dbj|BAL63654.1| pseudo-response regulator [Triticum durum]
gi|379025756|dbj|BAL63655.1| pseudo-response regulator [Triticum durum]
gi|379025758|dbj|BAL63656.1| pseudo-response regulator [Triticum durum]
gi|379025760|dbj|BAL63657.1| pseudo-response regulator [Triticum durum]
Length = 677
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|456359120|dbj|BAM93389.1| pseudo-response regulator [Triticum urartu]
gi|456359122|dbj|BAM93390.1| pseudo-response regulator [Triticum urartu]
gi|456359124|dbj|BAM93391.1| pseudo-response regulator [Triticum urartu]
gi|456359126|dbj|BAM93392.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|456359114|dbj|BAM93386.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 26 EREGQLEDIPQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVD 79
+R Q PQ E Q + ++T VL V+ R+++ LLR YQV +
Sbjct: 2 DRHHQQPPSPQGEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAE 61
Query: 80 SGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKV 137
+G +A YL + +S ++L++T+ M G++G DLL R +
Sbjct: 62 NGHQAWAYL-------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNH 102
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
KD+PV++MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 103 EVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 152
>gi|418517900|ref|ZP_13084056.1| RpfC protein [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
gi|410705371|gb|EKQ63845.1| RpfC protein [Xanthomonas axonopodis pv. malvacearum str. GSPB1386]
Length = 721
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 24/126 (19%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD L +R +L+ LL+ + ++VTCVD G+ L+ L E + +A+
Sbjct: 457 ILVADDHLANRLVLQRLLQKAGHRVTCVDGGEAVLDALA-----ETDYDAA--------- 502
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ D MPG++G D+LK+L+V PVVV+S++ P + C + GA
Sbjct: 503 -------IVDLHMPGVSGLDMLKQLRVMQAGGKPGTPVVVLSADVTPESIRSCEQAGAYA 555
Query: 168 FLLKPV 173
FL KPV
Sbjct: 556 FLAKPV 561
>gi|219117662|ref|XP_002179622.1| ethylene receptor 1 [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408675|gb|EEC48608.1| ethylene receptor 1 [Phaeodactylum tricornutum CCAP 1055/1]
Length = 833
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 80/155 (51%), Gaps = 28/155 (18%)
Query: 35 PQQEKQP---QQQQQETFHVLAVDDSLIDRKILENLL-RVSSYQVTCVDSGDKALEYLGL 90
PQQ P Q QQ +F L VDDS I+ K+++ +L R+ Q+ SG +AL+Y+
Sbjct: 679 PQQPPMPPVIQPQQAASFRTLIVDDSTINLKVMKQMLSRLGVQQILVAHSGKEALQYI-- 736
Query: 91 IDNLENNSNASPSTLSTKKEESRV---NLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVV 146
KE S++ NLI+TD MPGMTGY+LLK+L+ + + ++
Sbjct: 737 ------------------KESSKMHVPNLILTDLQMPGMTGYELLKQLRELKHFPQAKIM 778
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKL 181
S++ C+ G E + KP+ L+ L+++
Sbjct: 779 ACSADWSSETEAKCVHVGFEGLIRKPITLTCLKEI 813
>gi|379025574|dbj|BAL63564.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEMFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|357167771|ref|XP_003581325.1| PREDICTED: two-component response regulator ARR4-like [Brachypodium
distachyon]
Length = 81
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 53/88 (60%), Gaps = 20/88 (22%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
+V+AVDDS +DR ++ LLR S Y+VT VDSG +ALE L
Sbjct: 7 YVMAVDDSSVDRAVITALLRRSKYKVTAVDSGKRALEIL--------------------D 46
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKV 137
E V++I+TDY MP MTGY+LLK++K+
Sbjct: 47 SEPNVSMIITDYWMPEMTGYNLLKKIKM 74
>gi|418522790|ref|ZP_13088821.1| RpfC protein [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
gi|410700780|gb|EKQ59322.1| RpfC protein [Xanthomonas axonopodis pv. malvacearum str. GSPB2388]
Length = 721
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 66/126 (52%), Gaps = 24/126 (19%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD L +R +L+ LL+ + ++VTCVD G+ L+ L E + +A+
Sbjct: 457 ILVADDHLANRLVLQRLLQKAGHRVTCVDGGEAVLDALA-----ETDYDAA--------- 502
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ D MPG++G D+LK+L+V PVVV+S++ P + C + GA
Sbjct: 503 -------IVDLHMPGVSGLDMLKQLRVMQAGGKPGTPVVVLSADVTPESIRSCEQAGAYA 555
Query: 168 FLLKPV 173
FL KPV
Sbjct: 556 FLAKPV 561
>gi|456359104|dbj|BAM93381.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359106|dbj|BAM93382.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359108|dbj|BAM93383.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359116|dbj|BAM93387.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 26 EREGQLEDIPQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVD 79
+R Q PQ E Q + ++T VL V+ R+++ LLR YQV +
Sbjct: 2 DRHHQQPPSPQGEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAE 61
Query: 80 SGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKV 137
+G +A YL + +S ++L++T+ M G++G DLL R +
Sbjct: 62 NGHQAWAYL-------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNH 102
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
KD+PV++MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 103 EVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 152
>gi|302872938|ref|YP_003841571.1| signal transduction histidine kinase LytS [Clostridium
cellulovorans 743B]
gi|307686548|ref|ZP_07628994.1| signal transduction histidine kinase, LytS [Clostridium
cellulovorans 743B]
gi|302575795|gb|ADL49807.1| signal transduction histidine kinase, LytS [Clostridium
cellulovorans 743B]
Length = 1028
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/139 (27%), Positives = 72/139 (51%), Gaps = 21/139 (15%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P++ ++ +L VDD +I+ + N+L+ +Y +TCV G+ A+E L
Sbjct: 697 PERIHGDSGKILVVDDEIINLHSIANILKHENYDITCVADGESAIEIL------------ 744
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTM 159
K + +L++ D MP MTGY + K ++ + ++P++++++ N P V
Sbjct: 745 --------KRDKSFSLVILDIMMPDMTGYQVCKAIRETDNLFEMPILMLTASNQPKTVIQ 796
Query: 160 CLEEGAEEFLLKPVRLSDL 178
+EGA +FL KP + +L
Sbjct: 797 AFKEGANDFLYKPFEVDEL 815
>gi|456359102|dbj|BAM93380.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
Length = 662
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 26 EREGQLEDIPQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVD 79
+R Q PQ E Q + ++T VL V+ R+++ LLR YQV +
Sbjct: 2 DRHHQQPPSPQGEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAE 61
Query: 80 SGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKV 137
+G +A YL + +S ++L++T+ M G++G DLL R +
Sbjct: 62 NGHQAWAYL-------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNH 102
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
KD+PV++MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 103 EVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 152
>gi|456359092|dbj|BAM93375.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359094|dbj|BAM93376.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359096|dbj|BAM93377.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359098|dbj|BAM93378.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359100|dbj|BAM93379.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359224|dbj|BAM93441.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEMFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|456359072|dbj|BAM93365.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359074|dbj|BAM93366.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359076|dbj|BAM93367.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359078|dbj|BAM93368.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359080|dbj|BAM93369.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359082|dbj|BAM93370.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359084|dbj|BAM93371.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359086|dbj|BAM93372.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359088|dbj|BAM93373.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 668
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEMFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|379025526|dbj|BAL63540.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|379025506|dbj|BAL63530.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025508|dbj|BAL63531.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025510|dbj|BAL63532.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|379025576|dbj|BAL63565.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025578|dbj|BAL63566.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025580|dbj|BAL63567.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025582|dbj|BAL63568.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359194|dbj|BAM93426.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359196|dbj|BAM93427.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359220|dbj|BAM93439.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359222|dbj|BAM93440.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEMFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|254459178|ref|ZP_05072600.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|373868639|ref|ZP_09605037.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|207084071|gb|EDZ61361.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
gi|372470740|gb|EHP30944.1| multi-sensor signal transduction histidine kinase [Sulfurimonas
gotlandica GD1]
Length = 639
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 75/142 (52%), Gaps = 23/142 (16%)
Query: 32 EDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI 91
ED + K+ + Q ET +L VDDS + R ++ NLLR + V + G AL L
Sbjct: 110 EDTVKLLKRLEINQYET--ILVVDDSALFRLMISNLLRRHKFHVLEAEDGKIALNIL--- 164
Query: 92 DNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSS 150
N +P +NL++TDY MP M G +L+K ++ + KD+P++V+SS
Sbjct: 165 -------NKNPD----------INLVITDYEMPNMNGLELIKSVRNNHKLKDIPMIVISS 207
Query: 151 ENVPSRVTMCLEEGAEEFLLKP 172
+ S + C++ GA ++L KP
Sbjct: 208 VDAQSTIVDCMKHGANDYLHKP 229
>gi|308808948|ref|XP_003081784.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
gi|116060250|emb|CAL56309.1| WD40 repeat-containing protein (ISS) [Ostreococcus tauri]
Length = 878
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 21/125 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD I R + +LLR Y+VT +SG++ALE L +
Sbjct: 31 HVLVVDDERICRTVTSSLLRRCGYRVTMAESGEEALELL--------------------R 70
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ ++++TD MPG+ G LL+ ++ +D+PVV+MS+ V C++ GAE++
Sbjct: 71 RGTEFHMLLTDVMMPGIDGPALLQIVRNDERLRDMPVVMMSANEHSDTVFRCIQHGAEDY 130
Query: 169 LLKPV 173
LLKPV
Sbjct: 131 LLKPV 135
>gi|379025520|dbj|BAL63537.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025522|dbj|BAL63538.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359208|dbj|BAM93433.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|357157434|ref|XP_003577797.1| PREDICTED: two-component response regulator-like PRR95-like,
partial [Brachypodium distachyon]
Length = 681
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 94/190 (49%), Gaps = 33/190 (17%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
+ + VL V+ R+++ LLR Y+V V G KA E +
Sbjct: 15 RRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVM----------------- 57
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEG 164
+ +L++T+ MP ++G DLL R+ + K++PV++MSS++ V C++ G
Sbjct: 58 --RGRAYAFDLVLTEVDMPTLSGIDLLARIVAAHECKNIPVIMMSSQDSIGTVLRCMQNG 115
Query: 165 AEEFLLKPVRLSDLEKLQPRLLK----------SPNRSCGNNEDSDNDNKNET---SNYK 211
A +FL+KPVR ++L L + + S N + N+ +++ N+++T S+ +
Sbjct: 116 AVDFLVKPVRKNELRNLWQHVWRRHSMNTQTNASENNAASNHISANSGNRSKTGDNSDEE 175
Query: 212 SSTNSAFSKR 221
S S+ SKR
Sbjct: 176 SDAQSSGSKR 185
>gi|386039129|ref|YP_005958083.1| hypothetical protein PPM_0439 [Paenibacillus polymyxa M1]
gi|343095167|emb|CCC83376.1| hypothetical protein PPM_0439 [Paenibacillus polymyxa M1]
Length = 1046
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 79/152 (51%), Gaps = 24/152 (15%)
Query: 35 PQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNL 94
P +E +Q + + VLAVDD ++ ++LE LL + V VD ++AL+ L
Sbjct: 699 PLEEDGLEQVRNVPYRVLAVDDDGVNLRVLEELLYATGCSVVAVDHAEEALQLL------ 752
Query: 95 ENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENV 153
+R +L++TD+ MP M+G L +R++ S ++PV+++++ ++
Sbjct: 753 --------------NGRARFDLVITDWMMPEMSGIGLCRRIREGYSLSELPVLLLTARDL 798
Query: 154 PSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRL 185
P + GA +FL KPV D E+L+ R+
Sbjct: 799 PGDIHAGFMAGANDFLRKPV---DAEELKARV 827
>gi|118638616|gb|ABL09464.1| pseudo-response regulator [Triticum aestivum]
gi|118638620|gb|ABL09466.1| pseudo-response regulator [Triticum aestivum]
gi|118638622|gb|ABL09467.1| pseudo-response regulator [Triticum aestivum]
gi|379025454|dbj|BAL63504.1| pseudo-response regulator [Triticum turgidum]
gi|379025456|dbj|BAL63505.1| pseudo-response regulator [Triticum turgidum]
gi|379025458|dbj|BAL63506.1| pseudo-response regulator [Triticum turgidum]
gi|379025460|dbj|BAL63507.1| pseudo-response regulator [Triticum turgidum]
gi|379025462|dbj|BAL63508.1| pseudo-response regulator [Triticum turgidum]
gi|379025464|dbj|BAL63509.1| pseudo-response regulator [Triticum carthlicum]
gi|379025466|dbj|BAL63510.1| pseudo-response regulator [Triticum carthlicum]
gi|379025468|dbj|BAL63511.1| pseudo-response regulator [Triticum carthlicum]
gi|379025470|dbj|BAL63512.1| pseudo-response regulator [Triticum carthlicum]
gi|379025472|dbj|BAL63513.1| pseudo-response regulator [Triticum carthlicum]
gi|379025474|dbj|BAL63514.1| pseudo-response regulator [Triticum turanicum]
gi|379025476|dbj|BAL63515.1| pseudo-response regulator [Triticum turanicum]
gi|379025478|dbj|BAL63516.1| pseudo-response regulator [Triticum turanicum]
gi|379025482|dbj|BAL63518.1| pseudo-response regulator [Triticum turanicum]
gi|379025490|dbj|BAL63522.1| pseudo-response regulator [Triticum polonicum]
gi|379025492|dbj|BAL63523.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025494|dbj|BAL63524.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025496|dbj|BAL63525.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025498|dbj|BAL63526.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025500|dbj|BAL63527.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025502|dbj|BAL63528.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025512|dbj|BAL63533.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025514|dbj|BAL63534.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025518|dbj|BAL63536.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025528|dbj|BAL63541.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025534|dbj|BAL63544.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025538|dbj|BAL63546.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025540|dbj|BAL63547.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025568|dbj|BAL63561.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025570|dbj|BAL63562.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025572|dbj|BAL63563.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025698|dbj|BAL63626.1| pseudo-response regulator [Triticum durum]
gi|379025700|dbj|BAL63627.1| pseudo-response regulator [Triticum durum]
gi|379025702|dbj|BAL63628.1| pseudo-response regulator [Triticum durum]
gi|379025704|dbj|BAL63629.1| pseudo-response regulator [Triticum durum]
gi|379025706|dbj|BAL63630.1| pseudo-response regulator [Triticum durum]
gi|379025708|dbj|BAL63631.1| pseudo-response regulator [Triticum durum]
gi|379025710|dbj|BAL63632.1| pseudo-response regulator [Triticum durum]
gi|379025712|dbj|BAL63633.1| pseudo-response regulator [Triticum durum]
gi|379025714|dbj|BAL63634.1| pseudo-response regulator [Triticum durum]
gi|379025716|dbj|BAL63635.1| pseudo-response regulator [Triticum durum]
gi|379025718|dbj|BAL63636.1| pseudo-response regulator [Triticum durum]
gi|379025720|dbj|BAL63637.1| pseudo-response regulator [Triticum durum]
gi|379025722|dbj|BAL63638.1| pseudo-response regulator [Triticum durum]
gi|379025724|dbj|BAL63639.1| pseudo-response regulator [Triticum durum]
gi|379025726|dbj|BAL63640.1| pseudo-response regulator [Triticum durum]
gi|379025728|dbj|BAL63641.1| pseudo-response regulator [Triticum durum]
gi|379025730|dbj|BAL63642.1| pseudo-response regulator [Triticum durum]
gi|379025732|dbj|BAL63643.1| pseudo-response regulator [Triticum durum]
gi|395759117|dbj|BAM31255.1| pseudo-response regulator [Triticum aestivum]
gi|395759119|dbj|BAM31256.1| pseudo-response regulator [Triticum aestivum]
gi|456359198|dbj|BAM93428.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 668
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|379025682|dbj|BAL63618.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|159154683|gb|ABW93669.1| pseudo-response regulator [Triticum turgidum]
gi|379025504|dbj|BAL63529.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025524|dbj|BAL63539.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025530|dbj|BAL63542.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025532|dbj|BAL63543.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025536|dbj|BAL63545.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025544|dbj|BAL63549.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025546|dbj|BAL63550.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025548|dbj|BAL63551.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025550|dbj|BAL63552.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025552|dbj|BAL63553.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025554|dbj|BAL63554.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025556|dbj|BAL63555.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025558|dbj|BAL63556.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025560|dbj|BAL63557.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025562|dbj|BAL63558.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025564|dbj|BAL63559.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025642|dbj|BAL63598.1| pseudo-response regulator [Triticum durum]
gi|379025766|dbj|BAL63660.1| pseudo-response regulator [Triticum durum]
gi|456359070|dbj|BAM93364.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359090|dbj|BAM93374.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359200|dbj|BAM93429.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
gi|456359202|dbj|BAM93430.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359210|dbj|BAM93434.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359212|dbj|BAM93435.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359218|dbj|BAM93438.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 668
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|379025638|dbj|BAL63596.1| pseudo-response regulator [Triticum durum]
Length = 266
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA EFL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAAEFLAKPIRKNELKNLWAHVWR 159
>gi|302796211|ref|XP_002979868.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
gi|300152628|gb|EFJ19270.1| hypothetical protein SELMODRAFT_450936 [Selaginella moellendorffii]
Length = 865
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 84/170 (49%), Gaps = 25/170 (14%)
Query: 24 QQEREGQLEDIPQQEKQPQQQQQETFH-----VLAVDDSLIDRKILENLLRVSSYQVTCV 78
++E+E Q E + + QQQ + F VL V+D R ++ LLR Y+VT
Sbjct: 79 KEEQELQPEGEEKHRHRQQQQAENAFQHHHLKVLLVEDDDSTRHVVAALLRNCGYEVTPA 138
Query: 79 DSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKR-LKV 137
SG +A E L + S V+L++TD MP ++G +LL + +
Sbjct: 139 ASGLQAWEIL-------------------ETRSSSVDLVLTDLMMPRLSGIELLGKIMSR 179
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
S K +PVV+MS + V CL +GA +FL+KPVR ++L+ L +
Sbjct: 180 DSPKRIPVVMMSCLDSMDVVLKCLSKGAVDFLVKPVRKNELKNLWQHFWR 229
>gi|357121369|ref|XP_003562393.1| PREDICTED: two-component response regulator-like PRR37-like
[Brachypodium distachyon]
Length = 660
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 78/144 (54%), Gaps = 20/144 (13%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++ VL V+ R+I+ LLR YQV ++GD+A L ++++N
Sbjct: 17 HKKIIRVLLVETDDSTRQIVTALLRHCMYQVIPAENGDQAWARL---QDMQDN------- 66
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
++L++++ MPG++G LL+++ + KD+PV++MSS + V CL
Sbjct: 67 ---------IDLVLSEVVMPGLSGISLLEKIMAHNVCKDIPVIMMSSNDAMGTVFKCLST 117
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL+KP+R ++L+ L + +
Sbjct: 118 GAVDFLVKPIRKNELKNLWQHVWR 141
>gi|334137368|ref|ZP_08510806.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
gi|333605141|gb|EGL16517.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF7]
Length = 1040
Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/148 (27%), Positives = 80/148 (54%), Gaps = 24/148 (16%)
Query: 39 KQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNS 98
++ ++ +Q VL VDD ++ ++L NLL V Y++ VD G KA+ ++G
Sbjct: 692 REDRRARQIDATVLLVDDDPVNLQVLYNLLSVEGYRLIAVDGGAKAMAHIG--------- 742
Query: 99 NASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRV 157
++L++ D+ MPGM+G +L + ++ S ++PV+++++ ++P V
Sbjct: 743 -----------SGQSIDLVIADWMMPGMSGLELCRAIRARLSLAELPVLLLTARSLPEDV 791
Query: 158 TMCLEEGAEEFLLKPVRLSDLEKLQPRL 185
+ GA +FL KPV D ++L+ R+
Sbjct: 792 RTGFQAGANDFLRKPV---DADELRARV 816
>gi|118638642|gb|ABL09477.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 12 PQGEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 71
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 72 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 112
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 113 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 153
>gi|118638644|gb|ABL09478.1| pseudo-response regulator [Triticum aestivum]
gi|118638646|gb|ABL09479.1| pseudo-response regulator [Triticum aestivum]
gi|118638648|gb|ABL09480.1| pseudo-response regulator [Triticum aestivum]
gi|395759125|dbj|BAM31259.1| pseudo-response regulator [Triticum aestivum]
Length = 660
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 12 PQGEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 71
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 72 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 112
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 113 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 153
>gi|118638651|gb|ABL09481.1| pseudo-response regulator [Aegilops tauschii]
Length = 661
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 28 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 71
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 72 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 128
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 129 NGAADFLAKPIRKNELKNLWAHVWR 153
>gi|456359240|dbj|BAM93449.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359248|dbj|BAM93453.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 32 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 75
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 76 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 132
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 133 NGAADFLAKPIRKNELKNLWAHVWR 157
>gi|456359230|dbj|BAM93444.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359232|dbj|BAM93445.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359234|dbj|BAM93446.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
Length = 662
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 32 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 75
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 76 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 132
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 133 NGAADFLAKPIRKNELKNLWAHVWR 157
>gi|456359228|dbj|BAM93443.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359236|dbj|BAM93447.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359238|dbj|BAM93448.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359242|dbj|BAM93450.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359260|dbj|BAM93459.1| pseudo-response regulator [Triticum dicoccoides]
Length = 662
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 32 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 75
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 76 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 132
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 133 NGAADFLAKPIRKNELKNLWAHVWR 157
>gi|456359266|dbj|BAM93462.1| pseudo-response regulator [Triticum dicoccoides]
Length = 659
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|330794882|ref|XP_003285505.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
gi|325084508|gb|EGC37934.1| hypothetical protein DICPUDRAFT_97064 [Dictyostelium purpureum]
Length = 729
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 76/140 (54%), Gaps = 21/140 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD + RK+LENLL+ Y VT V +G+ A DN+ +
Sbjct: 111 ILVVDDDDVQRKVLENLLKKFHYNVTLVSNGEIAW------DNISSG------------- 151
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTM-CLEEGAEEF 168
+ + +L++TD MP +TG+DLL+R+ +K++PV++MS V + ++ G ++F
Sbjct: 152 QQKYDLVLTDVMMPHITGFDLLQRINDHPIYKNIPVILMSGTAVDYKYANDTIKIGGQDF 211
Query: 169 LLKPVRLSDLEKLQPRLLKS 188
L KP+ L+K +L+S
Sbjct: 212 LTKPIAKELLKKKIDTVLQS 231
>gi|255548045|ref|XP_002515079.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223545559|gb|EEF47063.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 697
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 76/146 (52%), Gaps = 20/146 (13%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+ R+I+ LLR SY+V V G A E L K
Sbjct: 43 VLLVEADYSTRQIISALLRKCSYRVAAVPDGLMAWETL-------------------KDG 83
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ ++LI+T+ +P ++GY LL + + K++PV++MSS + S+V C+ +GA +FL
Sbjct: 84 PNNIDLILTEVDLPLISGYALLTLVMEHDFCKNIPVIMMSSHDSISKVLKCMLKGAADFL 143
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGN 195
+KPVR ++L+ L + + + GN
Sbjct: 144 IKPVRRNELKNLWQHVWRRQTLTAGN 169
>gi|456359186|dbj|BAM93422.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|456359140|dbj|BAM93399.1| pseudo-response regulator [Triticum urartu]
gi|456359142|dbj|BAM93400.1| pseudo-response regulator [Triticum urartu]
gi|456359144|dbj|BAM93401.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 34 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 77
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 78 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 134
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 135 NGAADFLAKPIRKNELKNLWAHVWR 159
>gi|434400628|ref|YP_007134632.1| response regulator receiver modulated serine phosphatase [Stanieria
cyanosphaera PCC 7437]
gi|428271725|gb|AFZ37666.1| response regulator receiver modulated serine phosphatase [Stanieria
cyanosphaera PCC 7437]
Length = 573
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 68/143 (47%), Gaps = 29/143 (20%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD+ +R +L ++ YQV +G + LE + +
Sbjct: 177 ILVVDDNPTNRDLLSRQIKAQGYQVGTAANGQQVLELI---------------------Q 215
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+LI+ D MP M GY +LK L+ S W+ +PV+++S+ + V C+E GAE++L
Sbjct: 216 TGEYDLILLDIIMPEMDGYQVLKSLRDSQWRYIPVIMISALDQIDSVVKCIEMGAEDYLA 275
Query: 171 KPVRLSDLEKLQPRLLKSPNRSC 193
KP P LLK+ +C
Sbjct: 276 KP--------FNPVLLKARISAC 290
>gi|379025778|dbj|BAL63666.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|379026042|dbj|BAL63798.1| pseudo-response regulator [Triticum durum]
Length = 665
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 32 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 75
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 76 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 132
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 133 NGAADFLAKPIRKNELKNLWAHVWR 157
>gi|379025768|dbj|BAL63661.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025770|dbj|BAL63662.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025894|dbj|BAL63724.1| pseudo-response regulator [Triticum turanicum]
gi|379025896|dbj|BAL63725.1| pseudo-response regulator [Triticum turanicum]
gi|379025898|dbj|BAL63726.1| pseudo-response regulator [Triticum turanicum]
gi|379025900|dbj|BAL63727.1| pseudo-response regulator [Triticum turanicum]
gi|379025902|dbj|BAL63728.1| pseudo-response regulator [Triticum turanicum]
gi|379025910|dbj|BAL63732.1| pseudo-response regulator [Triticum polonicum]
gi|379025936|dbj|BAL63745.1| pseudo-response regulator [Triticum carthlicum]
gi|379026026|dbj|BAL63790.1| pseudo-response regulator [Triticum durum]
gi|379026028|dbj|BAL63791.1| pseudo-response regulator [Triticum durum]
gi|379026030|dbj|BAL63792.1| pseudo-response regulator [Triticum durum]
gi|379026032|dbj|BAL63793.1| pseudo-response regulator [Triticum durum]
gi|379026034|dbj|BAL63794.1| pseudo-response regulator [Triticum durum]
gi|379026036|dbj|BAL63795.1| pseudo-response regulator [Triticum durum]
gi|379026038|dbj|BAL63796.1| pseudo-response regulator [Triticum durum]
gi|379026040|dbj|BAL63797.1| pseudo-response regulator [Triticum durum]
gi|379026044|dbj|BAL63799.1| pseudo-response regulator [Triticum durum]
gi|379026046|dbj|BAL63800.1| pseudo-response regulator [Triticum durum]
gi|379026048|dbj|BAL63801.1| pseudo-response regulator [Triticum durum]
gi|379026050|dbj|BAL63802.1| pseudo-response regulator [Triticum durum]
gi|379026052|dbj|BAL63803.1| pseudo-response regulator [Triticum durum]
gi|379026054|dbj|BAL63804.1| pseudo-response regulator [Triticum durum]
gi|379026056|dbj|BAL63805.1| pseudo-response regulator [Triticum durum]
gi|379026058|dbj|BAL63806.1| pseudo-response regulator [Triticum durum]
gi|379026060|dbj|BAL63807.1| pseudo-response regulator [Triticum durum]
gi|379026072|dbj|BAL63813.1| pseudo-response regulator [Triticum durum]
gi|379026074|dbj|BAL63814.1| pseudo-response regulator [Triticum durum]
gi|379026076|dbj|BAL63815.1| pseudo-response regulator [Triticum durum]
gi|379026078|dbj|BAL63816.1| pseudo-response regulator [Triticum durum]
gi|379026080|dbj|BAL63817.1| pseudo-response regulator [Triticum durum]
gi|456359288|dbj|BAM93473.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 665
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 32 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 75
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 76 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 132
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 133 NGAADFLAKPIRKNELKNLWAHVWR 157
>gi|255636387|gb|ACU18532.1| unknown [Glycine max]
Length = 220
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 29/177 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD I K+LENLLR Y VT + +AL L ++
Sbjct: 21 VLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTML-------------------REN 61
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP + G+ LL+ + + D+PV+++S+ V + GA ++LL
Sbjct: 62 RNKFDLVISDVNMPDIDGFKLLELVGLEM--DLPVIMLSAHGDTKLVMKGVTHGACDYLL 119
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRKALSAE 227
KPVR+ +L+ + +++ N D+ ++N+ SN + + N A + L +E
Sbjct: 120 KPVRIEELKNIWQHVVRRKN--------FDSRDQNKASNEEKAPNFAGGGSQGLRSE 168
>gi|379025858|dbj|BAL63706.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 32 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 75
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 76 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 132
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 133 NGAADFLAKPIRKNELKNLWAHVWR 157
>gi|379025856|dbj|BAL63705.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025860|dbj|BAL63707.1| pseudo-response regulator [Triticum dicoccoides]
gi|379026014|dbj|BAL63784.1| pseudo-response regulator [Triticum durum]
gi|379026016|dbj|BAL63785.1| pseudo-response regulator [Triticum durum]
gi|379026018|dbj|BAL63786.1| pseudo-response regulator [Triticum durum]
gi|379026020|dbj|BAL63787.1| pseudo-response regulator [Triticum durum]
gi|379026022|dbj|BAL63788.1| pseudo-response regulator [Triticum durum]
gi|379026024|dbj|BAL63789.1| pseudo-response regulator [Triticum durum]
gi|456359268|dbj|BAM93463.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 32 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 75
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 76 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 132
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 133 NGAADFLAKPIRKNELKNLWAHVWR 157
>gi|379025890|dbj|BAL63722.1| pseudo-response regulator [Triticum dicoccoides]
Length = 660
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 32 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 75
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 76 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 132
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 133 NGAADFLAKPIRKNELKNLWAHVWR 157
>gi|379025862|dbj|BAL63708.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|456359204|dbj|BAM93431.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 34 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 77
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 78 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 134
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 135 NGAADFLAKPIRKNELKNLWAHVWR 159
>gi|379025940|dbj|BAL63747.1| pseudo-response regulator [Triticum carthlicum]
gi|456359264|dbj|BAM93461.1| pseudo-response regulator [Triticum dicoccoides]
Length = 664
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|379025838|dbj|BAL63696.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025840|dbj|BAL63697.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025842|dbj|BAL63698.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025844|dbj|BAL63699.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 661
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|379025488|dbj|BAL63521.1| pseudo-response regulator [Triticum polonicum]
gi|379025734|dbj|BAL63644.1| pseudo-response regulator [Triticum durum]
Length = 668
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 34 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 77
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 78 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 134
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 135 NGAADFLAKPIRKNELKNLWAHVWR 159
>gi|118638628|gb|ABL09470.1| pseudo-response regulator [Triticum aestivum]
gi|118638630|gb|ABL09471.1| pseudo-response regulator [Triticum aestivum]
gi|118638632|gb|ABL09472.1| pseudo-response regulator [Triticum aestivum]
gi|118638634|gb|ABL09473.1| pseudo-response regulator [Triticum aestivum]
gi|118638636|gb|ABL09474.1| pseudo-response regulator [Triticum aestivum]
gi|118638638|gb|ABL09475.1| pseudo-response regulator [Triticum aestivum]
gi|118638640|gb|ABL09476.1| pseudo-response regulator [Triticum aestivum]
gi|159138015|gb|ABW89014.1| pseudo-response regulator [Triticum turgidum]
gi|159138017|gb|ABW89015.1| pseudo-response regulator [Triticum turgidum]
gi|159138019|gb|ABW89016.1| pseudo-response regulator [Triticum turgidum]
gi|159138021|gb|ABW89017.1| pseudo-response regulator [Triticum turgidum]
gi|379025772|dbj|BAL63663.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025774|dbj|BAL63664.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025776|dbj|BAL63665.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025780|dbj|BAL63667.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025782|dbj|BAL63668.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025784|dbj|BAL63669.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025786|dbj|BAL63670.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025788|dbj|BAL63671.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025790|dbj|BAL63672.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025792|dbj|BAL63673.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025794|dbj|BAL63674.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025796|dbj|BAL63675.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025800|dbj|BAL63677.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025802|dbj|BAL63678.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025804|dbj|BAL63679.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025806|dbj|BAL63680.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025808|dbj|BAL63681.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025810|dbj|BAL63682.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025812|dbj|BAL63683.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025814|dbj|BAL63684.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025816|dbj|BAL63685.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025818|dbj|BAL63686.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025820|dbj|BAL63687.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025822|dbj|BAL63688.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025824|dbj|BAL63689.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025826|dbj|BAL63690.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025828|dbj|BAL63691.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025830|dbj|BAL63692.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025832|dbj|BAL63693.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025834|dbj|BAL63694.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025836|dbj|BAL63695.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025850|dbj|BAL63702.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025852|dbj|BAL63703.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025854|dbj|BAL63704.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025864|dbj|BAL63709.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025866|dbj|BAL63710.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025868|dbj|BAL63711.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025870|dbj|BAL63712.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025872|dbj|BAL63713.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025874|dbj|BAL63714.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025876|dbj|BAL63715.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025878|dbj|BAL63716.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025880|dbj|BAL63717.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025882|dbj|BAL63718.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025884|dbj|BAL63719.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025886|dbj|BAL63720.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025888|dbj|BAL63721.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025892|dbj|BAL63723.1| pseudo-response regulator [Triticum dicoccoides]
gi|379025912|dbj|BAL63733.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025914|dbj|BAL63734.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025916|dbj|BAL63735.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025918|dbj|BAL63736.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025920|dbj|BAL63737.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025922|dbj|BAL63738.1| pseudo-response regulator [Triticum turgidum subsp. turgidum]
gi|379025926|dbj|BAL63740.1| pseudo-response regulator [Triticum turgidum]
gi|379025928|dbj|BAL63741.1| pseudo-response regulator [Triticum turgidum]
gi|379025930|dbj|BAL63742.1| pseudo-response regulator [Triticum turgidum]
gi|379025932|dbj|BAL63743.1| pseudo-response regulator [Triticum turgidum]
gi|379025934|dbj|BAL63744.1| pseudo-response regulator [Triticum carthlicum]
gi|379025938|dbj|BAL63746.1| pseudo-response regulator [Triticum carthlicum]
gi|379025942|dbj|BAL63748.1| pseudo-response regulator [Triticum carthlicum]
gi|379025944|dbj|BAL63749.1| pseudo-response regulator [Triticum durum]
gi|379025946|dbj|BAL63750.1| pseudo-response regulator [Triticum durum]
gi|379025948|dbj|BAL63751.1| pseudo-response regulator [Triticum durum]
gi|379025950|dbj|BAL63752.1| pseudo-response regulator [Triticum durum]
gi|379025952|dbj|BAL63753.1| pseudo-response regulator [Triticum durum]
gi|379025954|dbj|BAL63754.1| pseudo-response regulator [Triticum durum]
gi|379025956|dbj|BAL63755.1| pseudo-response regulator [Triticum durum]
gi|379025958|dbj|BAL63756.1| pseudo-response regulator [Triticum durum]
gi|379025960|dbj|BAL63757.1| pseudo-response regulator [Triticum durum]
gi|379025962|dbj|BAL63758.1| pseudo-response regulator [Triticum durum]
gi|379025964|dbj|BAL63759.1| pseudo-response regulator [Triticum durum]
gi|379025966|dbj|BAL63760.1| pseudo-response regulator [Triticum durum]
gi|379025968|dbj|BAL63761.1| pseudo-response regulator [Triticum durum]
gi|379025970|dbj|BAL63762.1| pseudo-response regulator [Triticum durum]
gi|379025972|dbj|BAL63763.1| pseudo-response regulator [Triticum durum]
gi|379025974|dbj|BAL63764.1| pseudo-response regulator [Triticum durum]
gi|379025976|dbj|BAL63765.1| pseudo-response regulator [Triticum durum]
gi|379025978|dbj|BAL63766.1| pseudo-response regulator [Triticum durum]
gi|379025980|dbj|BAL63767.1| pseudo-response regulator [Triticum durum]
gi|379025982|dbj|BAL63768.1| pseudo-response regulator [Triticum durum]
gi|379025984|dbj|BAL63769.1| pseudo-response regulator [Triticum durum]
gi|379025986|dbj|BAL63770.1| pseudo-response regulator [Triticum durum]
gi|379025988|dbj|BAL63771.1| pseudo-response regulator [Triticum durum]
gi|379025990|dbj|BAL63772.1| pseudo-response regulator [Triticum durum]
gi|379025992|dbj|BAL63773.1| pseudo-response regulator [Triticum durum]
gi|379025994|dbj|BAL63774.1| pseudo-response regulator [Triticum durum]
gi|379025996|dbj|BAL63775.1| pseudo-response regulator [Triticum durum]
gi|379025998|dbj|BAL63776.1| pseudo-response regulator [Triticum durum]
gi|379026000|dbj|BAL63777.1| pseudo-response regulator [Triticum durum]
gi|379026002|dbj|BAL63778.1| pseudo-response regulator [Triticum durum]
gi|379026004|dbj|BAL63779.1| pseudo-response regulator [Triticum durum]
gi|379026006|dbj|BAL63780.1| pseudo-response regulator [Triticum durum]
gi|379026008|dbj|BAL63781.1| pseudo-response regulator [Triticum durum]
gi|379026010|dbj|BAL63782.1| pseudo-response regulator [Triticum durum]
gi|379026012|dbj|BAL63783.1| pseudo-response regulator [Triticum durum]
gi|379026062|dbj|BAL63808.1| pseudo-response regulator [Triticum durum]
gi|379026064|dbj|BAL63809.1| pseudo-response regulator [Triticum durum]
gi|379026066|dbj|BAL63810.1| pseudo-response regulator [Triticum durum]
gi|379026068|dbj|BAL63811.1| pseudo-response regulator [Triticum durum]
gi|379026070|dbj|BAL63812.1| pseudo-response regulator [Triticum durum]
gi|379026084|dbj|BAL63819.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|383215300|gb|AFG73164.1| pseudo-response regulator [Triticum aestivum]
gi|395759121|dbj|BAM31257.1| pseudo-response regulator [Triticum aestivum]
gi|395759123|dbj|BAM31258.1| pseudo-response regulator [Triticum aestivum]
gi|456359244|dbj|BAM93451.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359246|dbj|BAM93452.1| pseudo-response regulator [Triticum timopheevii subsp. armeniacum]
gi|456359270|dbj|BAM93464.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359272|dbj|BAM93465.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359274|dbj|BAM93466.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359276|dbj|BAM93467.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359278|dbj|BAM93468.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359280|dbj|BAM93469.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359282|dbj|BAM93470.1| pseudo-response regulator [Triticum ispahanicum]
gi|456359284|dbj|BAM93471.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359286|dbj|BAM93472.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 664
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|456359262|dbj|BAM93460.1| pseudo-response regulator [Triticum dicoccoides]
Length = 665
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 32 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 75
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 76 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 132
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 133 NGAADFLAKPIRKNELKNLWAHVWR 157
>gi|456359164|dbj|BAM93411.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|456359146|dbj|BAM93402.1| pseudo-response regulator [Triticum urartu]
gi|456359148|dbj|BAM93403.1| pseudo-response regulator [Triticum urartu]
gi|456359150|dbj|BAM93404.1| pseudo-response regulator [Triticum urartu]
gi|456359152|dbj|BAM93405.1| pseudo-response regulator [Triticum urartu]
gi|456359154|dbj|BAM93406.1| pseudo-response regulator [Triticum urartu]
gi|456359156|dbj|BAM93407.1| pseudo-response regulator [Triticum urartu]
gi|456359158|dbj|BAM93408.1| pseudo-response regulator [Triticum urartu]
gi|456359160|dbj|BAM93409.1| pseudo-response regulator [Triticum urartu]
gi|456359162|dbj|BAM93410.1| pseudo-response regulator [Triticum urartu]
gi|456359166|dbj|BAM93412.1| pseudo-response regulator [Triticum urartu]
gi|456359168|dbj|BAM93413.1| pseudo-response regulator [Triticum urartu]
gi|456359170|dbj|BAM93414.1| pseudo-response regulator [Triticum urartu]
gi|456359172|dbj|BAM93415.1| pseudo-response regulator [Triticum urartu]
gi|456359174|dbj|BAM93416.1| pseudo-response regulator [Triticum urartu]
gi|456359176|dbj|BAM93417.1| pseudo-response regulator [Triticum urartu]
gi|456359178|dbj|BAM93418.1| pseudo-response regulator [Triticum urartu]
gi|456359180|dbj|BAM93419.1| pseudo-response regulator [Triticum urartu]
gi|456359182|dbj|BAM93420.1| pseudo-response regulator [Triticum urartu]
gi|456359184|dbj|BAM93421.1| pseudo-response regulator [Triticum urartu]
gi|456359188|dbj|BAM93423.1| pseudo-response regulator [Triticum urartu]
gi|456359190|dbj|BAM93424.1| pseudo-response regulator [Triticum urartu]
gi|456359192|dbj|BAM93425.1| pseudo-response regulator [Triticum urartu]
Length = 662
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|456359128|dbj|BAM93393.1| pseudo-response regulator [Triticum urartu]
gi|456359130|dbj|BAM93394.1| pseudo-response regulator [Triticum urartu]
gi|456359132|dbj|BAM93395.1| pseudo-response regulator [Triticum urartu]
gi|456359134|dbj|BAM93396.1| pseudo-response regulator [Triticum urartu]
gi|456359136|dbj|BAM93397.1| pseudo-response regulator [Triticum urartu]
gi|456359138|dbj|BAM93398.1| pseudo-response regulator [Triticum urartu]
Length = 665
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 34 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 77
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 78 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 134
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 135 NGAADFLAKPIRKNELKNLWAHVWR 159
>gi|379025798|dbj|BAL63676.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|379025516|dbj|BAL63535.1| pseudo-response regulator [Triticum dicoccoides]
gi|456359206|dbj|BAM93432.1| pseudo-response regulator [Triticum dicoccoides]
Length = 668
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 34 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 77
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 78 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 134
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 135 NGAADFLAKPIRKNELKNLWAHVWR 159
>gi|395759127|dbj|BAM31260.1| pseudo-response regulator [Triticum aestivum]
Length = 469
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 28 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 71
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 72 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 128
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 129 NGAADFLAKPIRKNELKNLWAHVWR 153
>gi|328875568|gb|EGG23932.1| cAMP phosphodiesterase [Dictyostelium fasciculatum]
Length = 851
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 21/126 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L VDD + RKILE+ L+ Y VT V +G++A N+ N N
Sbjct: 182 HILVVDDDQVQRKILESALKKFKYNVTVVTNGEEAW-------NILINGN---------- 224
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTM-CLEEGAEE 167
++ +L++TD MP ++G+DLL+R+ + K+VPV++MS + + ++ G ++
Sbjct: 225 --TKYDLVLTDVMMPNISGFDLLQRINDHAEIKNVPVILMSGTAIDYKYANDTIKIGGQD 282
Query: 168 FLLKPV 173
FL KP+
Sbjct: 283 FLTKPI 288
>gi|153870385|ref|ZP_01999797.1| Response regulator receiver protein [Beggiatoa sp. PS]
gi|152073147|gb|EDN70201.1| Response regulator receiver protein [Beggiatoa sp. PS]
Length = 855
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 77/142 (54%), Gaps = 27/142 (19%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL--GLIDNLENNS 98
PQ+++ + F +L VDD ++ +L N L ++ Y SG +AL L GLI
Sbjct: 553 PQEEESDVFKILIVDDEAVNLHVLANHLSLNHYATIQAASGREALSILEEGLIP------ 606
Query: 99 NASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWK--DVPVVVMSSENVPSR 156
+LI+ D MP MTGY++ ++++ W+ ++P+V+++++N S
Sbjct: 607 ----------------DLILLDVMMPHMTGYEVTQKIR-EHWEANELPIVLLTAKNQVSD 649
Query: 157 VTMCLEEGAEEFLLKPVRLSDL 178
+ M LE GA ++L+KP+ ++L
Sbjct: 650 LVMGLEVGANDYLIKPISKNEL 671
>gi|119898694|ref|YP_933907.1| two-component response regulator [Azoarcus sp. BH72]
gi|119671107|emb|CAL95020.1| probable two-component response regulator [Azoarcus sp. BH72]
Length = 301
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 69/127 (54%), Gaps = 22/127 (17%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
E +L VDD I+RK+L LL + V SG++ALE +
Sbjct: 4 ERHRILVVDDERINRKLLSELLE-EHHDVVIAKSGEQALERV------------------ 44
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGA 165
+ +S V+LI+ D MPGM+G+D+L+RLK S + KDVPV+ ++S N + L+ GA
Sbjct: 45 --QADSAVDLILLDVVMPGMSGHDVLRRLKASDATKDVPVIFITSLNSVDDEEIGLDLGA 102
Query: 166 EEFLLKP 172
+++ KP
Sbjct: 103 ADYITKP 109
>gi|413915888|gb|AFW55820.1| hypothetical protein ZEAMMB73_931489 [Zea mays]
Length = 157
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/44 (72%), Positives = 38/44 (86%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID 92
FHVLAVDDSL DRK++E LL+ SS+QVT VDSG KAL++LGL D
Sbjct: 69 FHVLAVDDSLPDRKLIERLLKTSSFQVTTVDSGSKALQFLGLHD 112
>gi|449443269|ref|XP_004139402.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449494037|ref|XP_004159429.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 699
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD I K+LENLLR Y VT + +AL+ L ++
Sbjct: 26 VLAVDDDPICLKVLENLLRKCQYHVTTTNQAVQALKML-------------------REN 66
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++R +L+++D MP M G+ LL+ + + D+PV+++S+ + V + GA ++LL
Sbjct: 67 KNRFDLVISDVNMPDMDGFKLLELVGLE--MDLPVIMLSAHSNTELVKKGVLHGACDYLL 124
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L+ + +L+
Sbjct: 125 KPVRIEELKNIWQHVLR 141
>gi|340508704|gb|EGR34354.1| hypothetical protein IMG5_014920 [Ichthyophthirius multifiliis]
Length = 545
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 80/146 (54%), Gaps = 20/146 (13%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPS 103
++ HVL +D R L ++L + +YQVT V++G A + L
Sbjct: 6 RENRNIHVLVAEDDNFQRLALIDVLTLCNYQVTDVENGRLARDEL--------------- 50
Query: 104 TLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLE 162
KE+S +++++ D MP M G++LL ++ +++PV++MS++N +V +CL
Sbjct: 51 ----LKEDSNIDVVLLDLWMPEMDGWELLCLMQNYEKLRNIPVIMMSADNEQEKVALCLA 106
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLKS 188
GA+++L+KP+R+ ++ + ++ S
Sbjct: 107 HGAKDYLVKPIRIQMVKGIANHVISS 132
>gi|456359112|dbj|BAM93385.1| pseudo-response regulator [Triticum monococcum subsp. aegilopoides]
gi|456359118|dbj|BAM93388.1| pseudo-response regulator [Triticum monococcum subsp. monococcum]
Length = 662
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 82/170 (48%), Gaps = 27/170 (15%)
Query: 26 EREGQLEDIPQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVD 79
+R Q PQ E Q + ++T VL V+ R+++ LLR YQV +
Sbjct: 2 DRHHQQPPSPQGEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVIALLRHCMYQVIPAE 61
Query: 80 SGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKV 137
+G +A YL + +S ++L++T+ M G++G DLL R +
Sbjct: 62 NGHQAWAYL-------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNH 102
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
KD+PV++MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 103 EVCKDIPVIMMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 152
>gi|392410312|ref|YP_006446919.1| PAS domain S-box [Desulfomonile tiedjei DSM 6799]
gi|390623448|gb|AFM24655.1| PAS domain S-box [Desulfomonile tiedjei DSM 6799]
Length = 1147
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 19/145 (13%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
E VL VDD+ +R+ILEN L + T VD G+ AL +
Sbjct: 748 ENLPVLVVDDNATNRRILENTLLQWQTKPTIVDGGEAALH-----------------AMK 790
Query: 107 TKKEESR-VNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEG 164
+ EE R L++TD MP M G++L++R+ SW +++++S C++ G
Sbjct: 791 SAHEEGRPFKLVITDCMMPEMDGFELVRRINEHPSWATPTIIMLTSAGERGDAARCMKLG 850
Query: 165 AEEFLLKPVRLSDLEKLQPRLLKSP 189
+LLKP++ SDL R+LK P
Sbjct: 851 ISAYLLKPIKQSDLFFTISRVLKEP 875
Score = 37.7 bits (86), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 62/133 (46%), Gaps = 24/133 (18%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
H+L +D+ +++K+ +L + V+ +G +AL+ L +
Sbjct: 897 LHILLAEDNAVNQKLAVKMLERMGHTVSVSANGQEALDCLKI------------------ 938
Query: 109 KEESRVNLIMTDYCMPGMTGYD---LLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGA 165
+ +L++ D MP M G + +++ + +S + VP+V M++ + CL+ G
Sbjct: 939 ---QKFDLVLMDVQMPIMDGLEATRIVREHEKTSNEHVPIVAMTAYAMKGDKEKCLDAGM 995
Query: 166 EEFLLKPVRLSDL 178
+ ++ KP+ +L
Sbjct: 996 DGYISKPINAQEL 1008
>gi|316935701|ref|YP_004110683.1| Fis family two component sigma54 specific transcriptional regulator
[Rhodopseudomonas palustris DX-1]
gi|315603415|gb|ADU45950.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris DX-1]
Length = 495
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ VDSGD A++ L T +
Sbjct: 5 ILIADDDAVQRRLVENMVQKCGYETITVDSGDAAVDAL------------------TAPD 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ ++ D MPG+ G +L +++ S DVPV+V ++ V + GA +F++
Sbjct: 47 SPAIDAVVLDLVMPGLDGLGVLSKIRASGI-DVPVIVQTAHGGIDNVVSAMRAGAHDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNASAMKGE 129
>gi|146161471|ref|XP_001007239.2| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|146146737|gb|EAR86994.2| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 847
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 20/151 (13%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
++ HVL +D R L ++L + YQVT V++G A + L
Sbjct: 7 QSIHVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDEL------------------ 48
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGA 165
K +S +++++ D MP M G +LL ++ K +PV++MS +N RV C+ GA
Sbjct: 49 -LKADSNIDIVLLDLYMPEMDGIELLLLMQEHEHLKRIPVIMMSFDNEQERVAYCIANGA 107
Query: 166 EEFLLKPVRLSDLEKLQPRLLKSPNRSCGNN 196
+++L+KP+R+ +++ L + +PN + N
Sbjct: 108 KDYLVKPLRIQNVKGLAKYVEYNPNNTTVGN 138
>gi|77548762|gb|ABA91559.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 699
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 89/176 (50%), Gaps = 24/176 (13%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
+ + VL V+ R+++ LLR Y+V V G KA +
Sbjct: 41 RRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWGVM----------------- 83
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEG 164
++ +L++T+ MP ++G +LL R+ S K++PV++MSS++ V C+++G
Sbjct: 84 --RERAYAFDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKG 141
Query: 165 AEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSK 220
A +FL+KPVR ++L L + + R N++ + ++N N SN+ S+ SK
Sbjct: 142 AVDFLVKPVRKNELRNLWQHVWR---RHAMNSQTNASEN-NAASNHLSANGGNGSK 193
>gi|255928914|gb|ACU42264.1| pseudo response regulator 37 [Pisum sativum]
Length = 780
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 20/138 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD R ++ LLR Y+VT V +G +A + L E+ N
Sbjct: 76 VLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKAL------EDPGN----------- 118
Query: 111 ESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
R++L++T+ MP ++G LL K + + K++PV++MSS + V CL +GA +FL
Sbjct: 119 --RIDLVLTEVAMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFL 176
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KP+R ++L+ L + +
Sbjct: 177 VKPIRRNELKNLWQHVWR 194
>gi|355469068|gb|ACU42263.2| pseudo response regulator 37 [Pisum sativum]
Length = 792
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 75/138 (54%), Gaps = 20/138 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD R ++ LLR Y+VT V +G +A + L E+ N
Sbjct: 88 VLLVDDDDSTRNVVCALLRNCGYEVTAVSNGLQAWKAL------EDPGN----------- 130
Query: 111 ESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
R++L++T+ MP ++G LL K + + K++PV++MSS + V CL +GA +FL
Sbjct: 131 --RIDLVLTEVAMPFVSGIGLLCKIMSHIALKNIPVIMMSSHDSMGIVFKCLSKGAADFL 188
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KP+R ++L+ L + +
Sbjct: 189 VKPIRRNELKNLWQHVWR 206
>gi|413956105|gb|AFW88754.1| hypothetical protein ZEAMMB73_978741 [Zea mays]
Length = 743
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 78/142 (54%), Gaps = 20/142 (14%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
+T VL V++ R+++ LLR Y+V ++G A YL ++L+NN
Sbjct: 81 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL---EDLQNN--------- 128
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGA 165
++L++T+ MP ++G LL ++ KD+PV++MS+ + S V CL +GA
Sbjct: 129 -------IDLVLTEVFMPCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGA 181
Query: 166 EEFLLKPVRLSDLEKLQPRLLK 187
+FL+KP+R ++L+ L + +
Sbjct: 182 VDFLVKPLRKNELKNLWQHVWR 203
>gi|356556600|ref|XP_003546612.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 697
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/194 (27%), Positives = 97/194 (50%), Gaps = 33/194 (17%)
Query: 38 EKQPQQQQQETF----HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDN 93
EKQ + + + F VLAVDD I K+LENLLR Y VT + +AL+ L
Sbjct: 4 EKQREDEGCDRFPVGMRVLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALKML----- 58
Query: 94 LENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENV 153
++ ++ +L+++D MP + G+ LL+ + + D+PV+++S+
Sbjct: 59 --------------RENRNKFDLVISDVNMPDIDGFKLLELVGLE--MDLPVIMLSAHGD 102
Query: 154 PSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSS 213
V + GA ++LLKPVR+ +L+ + +++ N D+ ++N+ SN + +
Sbjct: 103 TKLVMKGVTHGACDYLLKPVRIEELKNIWQHVVRRKNF--------DSRDQNKASNEEKA 154
Query: 214 TNSAFSKRKALSAE 227
N A + L +E
Sbjct: 155 PNIAGEGSQGLRSE 168
>gi|356530639|ref|XP_003533888.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 676
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 89/177 (50%), Gaps = 29/177 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD I K+LENLLR Y VT + +AL L ++
Sbjct: 21 VLAVDDDPICLKVLENLLRKCQYHVTTTNQAVEALTML-------------------REN 61
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP + G+ LL+ + + D+PV+++S+ V + GA ++LL
Sbjct: 62 RNKFDLVISDVNMPDIDGFKLLELVGLE--MDLPVIMLSAHGDTKLVMKGVTHGACDYLL 119
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRKALSAE 227
KPVR+ +L+ + +++ N D+ ++N+ SN + + N A + L +E
Sbjct: 120 KPVRIEELKNIWQHVVRRKNF--------DSRDQNKASNEEKAPNFAGGGSQGLRSE 168
>gi|312283507|dbj|BAJ34619.1| unnamed protein product [Thellungiella halophila]
Length = 539
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 79/160 (49%), Gaps = 26/160 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD +ILE LL Y VT D AL+ L ++
Sbjct: 16 VLAVDDDQTCLRILETLLHRCQYHVTTTDQAQTALKLL-------------------REN 56
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+++ +L+++D MP M G+ LL+ + + D+PV+++S+ + P V ++ GA ++LL
Sbjct: 57 KNKFDLVISDVDMPDMDGFKLLELVGLE--MDLPVIMLSAHSDPKYVMKGVKHGACDYLL 114
Query: 171 KPVRLSDLEKLQPRL-----LKSPNRSCGNNEDSDNDNKN 205
KPVR+ +L+ + + K S N E N ++N
Sbjct: 115 KPVRIEELKNIWQHVVRKGKFKKMKSSLSNGESEGNSDQN 154
>gi|118638618|gb|ABL09465.1| pseudo-response regulator [Triticum aestivum]
gi|379025584|dbj|BAL63569.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025586|dbj|BAL63570.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025588|dbj|BAL63571.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025590|dbj|BAL63572.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025592|dbj|BAL63573.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025594|dbj|BAL63574.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025596|dbj|BAL63575.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025598|dbj|BAL63576.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025600|dbj|BAL63577.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025602|dbj|BAL63578.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025604|dbj|BAL63579.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025606|dbj|BAL63580.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025608|dbj|BAL63581.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025610|dbj|BAL63582.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025612|dbj|BAL63583.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025614|dbj|BAL63584.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025616|dbj|BAL63585.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025618|dbj|BAL63586.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025620|dbj|BAL63587.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025632|dbj|BAL63593.1| pseudo-response regulator [Triticum durum]
gi|379025634|dbj|BAL63594.1| pseudo-response regulator [Triticum durum]
gi|379025636|dbj|BAL63595.1| pseudo-response regulator [Triticum durum]
gi|379025640|dbj|BAL63597.1| pseudo-response regulator [Triticum durum]
gi|456359214|dbj|BAM93436.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
gi|456359216|dbj|BAM93437.1| pseudo-response regulator [Triticum turgidum subsp. paleocolchicum]
Length = 266
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|456359250|dbj|BAM93454.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359252|dbj|BAM93455.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359254|dbj|BAM93456.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359256|dbj|BAM93457.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
gi|456359258|dbj|BAM93458.1| pseudo-response regulator [Triticum timopheevii subsp. timopheevii]
Length = 331
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 32 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 75
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 76 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 132
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 133 NGAADFLAKPIRKNELKNLWAHVWR 157
>gi|428302090|ref|YP_007140396.1| response regulator receiver protein [Calothrix sp. PCC 6303]
gi|428238634|gb|AFZ04424.1| response regulator receiver protein [Calothrix sp. PCC 6303]
Length = 146
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 82/134 (61%), Gaps = 14/134 (10%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQ--VTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+L V+DS D KIL+ L++ Q + SGD+ALE+L I N +NNS+ S
Sbjct: 9 LLIVEDSNEDFKILQRLMQRLDVQNPIYRCSSGDEALEFLERIGN-DNNSDIS------- 60
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
S+ ++I+ D +PG+ G D+L ++K + +K++PVV+ ++ + P + +C ++GA
Sbjct: 61 ---SKPSVILLDLNLPGIDGRDILSQIKQDNKFKEIPVVIFTTSSNPKDIELCYQKGANG 117
Query: 168 FLLKPVRLSDLEKL 181
+L+KP+ +L+K+
Sbjct: 118 YLIKPMNADELKKI 131
>gi|87118378|ref|ZP_01074277.1| Response regulator receiver [Marinomonas sp. MED121]
gi|86166012|gb|EAQ67278.1| Response regulator receiver [Marinomonas sp. MED121]
Length = 301
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 71/125 (56%), Gaps = 20/125 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+LAVDD I+ +ILE+ L S YQVT S ++A +YL +NA
Sbjct: 7 HLLAVDDEEINLRILEHYLSDSDYQVTFAQSSNQAWDYL---------TNA--------- 48
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ + ++++ D+ MP + G +LLK+ K + ++K VP +++S + PS ++ L GA +
Sbjct: 49 -DYQFDVLLLDWVMPDVDGLELLKKAKELENYKHVPAIMISGLSAPSAISKGLNAGAFYY 107
Query: 169 LLKPV 173
L KP+
Sbjct: 108 LTKPL 112
>gi|356539090|ref|XP_003538033.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like APRR3-like [Glycine max]
Length = 792
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 75/138 (54%), Gaps = 20/138 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+D R ++ LLR SY+VT V +G +A + L +
Sbjct: 92 VLLVEDDDSTRHVVRALLRNCSYEVTAVSNGLQAWKVL-------------------EDP 132
Query: 111 ESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E+ ++L++T+ MP ++G LL K + + K++PV++MSS + V CL +GA +FL
Sbjct: 133 ENGIDLVLTEVAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFL 192
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KP+R ++L+ L + +
Sbjct: 193 VKPIRRNELKNLWQHVWR 210
>gi|424867357|ref|ZP_18291161.1| Putative multi-sensor hybrid histidine kinase [Leptospirillum sp.
Group II 'C75']
gi|124515967|gb|EAY57476.1| putative multi-sensor hybrid histidine kinase [Leptospirillum
rubarum]
gi|387222151|gb|EIJ76619.1| Putative multi-sensor hybrid histidine kinase [Leptospirillum sp.
Group II 'C75']
Length = 851
Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 25/175 (14%)
Query: 35 PQQEKQPQ----QQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL 90
P K P QQQ + +L VDD ++R +LE LL YQV G+ AL
Sbjct: 566 PSPHKAPAPTLPTQQQTSGTILVVDDQEVNRTVLEGLLESKGYQVISAIDGESAL----- 620
Query: 91 IDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMS 149
D LE NS +R +L++ D CMPG G D+LK + + S VP ++++
Sbjct: 621 -DLLEKNS-------------ARFDLMILDLCMPGRGGLDVLKAHRFLESKNPVPAIILT 666
Query: 150 SENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNK 204
+ L+ AE FL KP+ L + R++K +CG SD+ N+
Sbjct: 667 ANQSEEARLDSLDAKAEVFLTKPLDTRRLLETIDRIIKRQAVTCGRIA-SDSSNR 720
>gi|410478311|ref|YP_006765948.1| signal transduction histidine kinase [Leptospirillum ferriphilum
ML-04]
gi|406773563|gb|AFS52988.1| signal transduction histidine kinase [Leptospirillum ferriphilum
ML-04]
Length = 851
Score = 70.1 bits (170), Expect = 7e-10, Method: Composition-based stats.
Identities = 55/175 (31%), Positives = 81/175 (46%), Gaps = 25/175 (14%)
Query: 35 PQQEKQPQ----QQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL 90
P K P QQQ + +L VDD ++R +LE LL YQV G+ AL
Sbjct: 566 PSPHKAPAPTLPTQQQTSGTILVVDDQEVNRTVLEGLLESKGYQVISAIDGESAL----- 620
Query: 91 IDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMS 149
D LE NS +R +L++ D CMPG G D+LK + + S VP ++++
Sbjct: 621 -DLLEKNS-------------ARFDLMILDLCMPGRGGLDVLKAHRFLESKNPVPAIILT 666
Query: 150 SENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNK 204
+ L+ AE FL KP+ L + R++K +CG SD+ N+
Sbjct: 667 ANQSEEARLDSLDAKAEVFLTKPLDTRRLLETIDRIIKRQAVTCGRIA-SDSSNR 720
>gi|326518812|dbj|BAJ92567.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 687
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 24/176 (13%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
+ + VL V+ R+++ LLR Y+V V G KA E +
Sbjct: 35 RRSLRVLLVEHDDSTRQVVTALLRKCGYRVAAVADGMKAWEVM----------------- 77
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEG 164
+ +L++T+ MP ++G DLL R+ + K++PV++MSS++ V C++ G
Sbjct: 78 --RGRAYAFDLVLTEVNMPTLSGIDLLSRIVAADECKNIPVIMMSSQDSIGTVLKCMQNG 135
Query: 165 AEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSK 220
A +FL+KPVR ++L L + + R N++ + ++N N SN+ S + SK
Sbjct: 136 AVDFLVKPVRKNELRNLWQHVWR---RHSMNSQLNASEN-NAASNHISVNSGTGSK 187
>gi|108707546|gb|ABF95341.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 745
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 46/197 (23%)
Query: 18 LLENI----PQQE--REGQLEDIPQQEKQPQQQQQ--------------------ETFHV 51
+LEN P++E R G ED+P P + QQ +T V
Sbjct: 24 ILENGHSHKPEEEEWRNGMGEDLPNGHSTPPEPQQTDEQKEHQVQIVRWERFLPVKTLRV 83
Query: 52 LAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEE 111
L V++ R+++ LLR Y+V ++G A + L ++L+N+
Sbjct: 84 LLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL---EDLQNH-------------- 126
Query: 112 SRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++L++T+ MP ++G LL ++ KD+PV++MSS + V CL +GA +FL+
Sbjct: 127 --IDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLV 184
Query: 171 KPVRLSDLEKLQPRLLK 187
KP+R ++L+ L + +
Sbjct: 185 KPIRKNELKNLWQHVWR 201
>gi|356546098|ref|XP_003541468.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 680
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD +LENLLR Y VT + KALE L +K
Sbjct: 13 VLAVDDDKTCLTVLENLLRKCQYNVTTTNQAIKALEML-------------------RKN 53
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV+++S RV + +GA ++L
Sbjct: 54 RNKFDLVISDVNMPDMDGFKLLELVGLE--MDLPVIMLSGYGDKERVMRGVIQGACDYLT 111
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L+ + +L+
Sbjct: 112 KPVRIEELQNIWQHVLR 128
>gi|254784391|ref|YP_003071819.1| PAS domain containing histidine kinase [Teredinibacter turnerae
T7901]
gi|237686889|gb|ACR14153.1| PAS domain containing histidine kinase [Teredinibacter turnerae
T7901]
Length = 1096
Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats.
Identities = 46/150 (30%), Positives = 76/150 (50%), Gaps = 21/150 (14%)
Query: 29 GQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
G L Q +++ + + ++ VL VDD L R++L LLR+S ++V V S AL L
Sbjct: 867 GSLPVANQAKQRARLRSEQETRVLVVDDDLDSREVLARLLRLSGFEVDAVAS---ALPVL 923
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVM 148
GL++ E I TD MP M G +LL+ L+ S W + PV +
Sbjct: 924 GLVN------------------EHHYQAIFTDIRMPEMDGVELLRALRSSIWGNAPVFAV 965
Query: 149 SSENVPSRVTMCLEEGAEEFLLKPVRLSDL 178
S+ ++ + + +G ++F+ KPV+L +L
Sbjct: 966 SASSMEHERSFFIAQGFDDFISKPVQLDEL 995
>gi|242081263|ref|XP_002445400.1| hypothetical protein SORBIDRAFT_07g015390 [Sorghum bicolor]
gi|241941750|gb|EES14895.1| hypothetical protein SORBIDRAFT_07g015390 [Sorghum bicolor]
Length = 141
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 25/137 (18%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V++ +D + LLR + QV V +ALE L N E+N
Sbjct: 26 VLIVENCQVDYFVTSYLLRGHNVQVIAVQGPLQALELL----NAEHN------------- 68
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
V LI+++Y MP MTGYDLL +K S +PVV+ S + P V CL+ GA++++
Sbjct: 69 ---VKLILSNYWMPNMTGYDLLMEMKKSPKLSHLPVVITSFDKSPEVVKKCLDGGAKDYI 125
Query: 170 LKPVRLSDLEKLQPRLL 186
+KP++ +D+ PR+L
Sbjct: 126 IKPIKHADV----PRIL 138
>gi|51571885|dbj|BAD38859.1| pseudo-response regulator 73 [Oryza sativa Indica Group]
Length = 767
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 46/197 (23%)
Query: 18 LLENI----PQQE--REGQLEDIPQQEKQPQQQQQ--------------------ETFHV 51
+LEN P++E R G ED+P P + QQ +T V
Sbjct: 24 ILENGHSHKPEEEEWRNGMGEDLPNGHSTPPEPQQTDEQKEHQVRIVRWERFLPVKTLRV 83
Query: 52 LAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEE 111
L V++ R+++ LLR Y+V ++G A + L ++L+N+
Sbjct: 84 LLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL---EDLQNH-------------- 126
Query: 112 SRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++L++T+ MP ++G LL ++ KD+PV++MSS + V CL +GA +FL+
Sbjct: 127 --IDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLV 184
Query: 171 KPVRLSDLEKLQPRLLK 187
KP+R ++L+ L + +
Sbjct: 185 KPIRKNELKNLWQHVWR 201
>gi|115452319|ref|NP_001049760.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|122247198|sp|Q10N34.1|PRR73_ORYSJ RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
gi|51571879|dbj|BAD38856.1| pseudo-response regulator 73 [Oryza sativa Japonica Group]
gi|108707543|gb|ABF95338.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
gi|113548231|dbj|BAF11674.1| Os03g0284100 [Oryza sativa Japonica Group]
gi|222624693|gb|EEE58825.1| hypothetical protein OsJ_10396 [Oryza sativa Japonica Group]
Length = 767
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 46/197 (23%)
Query: 18 LLENI----PQQE--REGQLEDIPQQEKQPQQQQQ--------------------ETFHV 51
+LEN P++E R G ED+P P + QQ +T V
Sbjct: 24 ILENGHSHKPEEEEWRNGMGEDLPNGHSTPPEPQQTDEQKEHQVQIVRWERFLPVKTLRV 83
Query: 52 LAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEE 111
L V++ R+++ LLR Y+V ++G A + L ++L+N+
Sbjct: 84 LLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL---EDLQNH-------------- 126
Query: 112 SRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++L++T+ MP ++G LL ++ KD+PV++MSS + V CL +GA +FL+
Sbjct: 127 --IDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLV 184
Query: 171 KPVRLSDLEKLQPRLLK 187
KP+R ++L+ L + +
Sbjct: 185 KPIRKNELKNLWQHVWR 201
>gi|108707544|gb|ABF95339.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 533
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 42/188 (22%)
Query: 23 PQQE--REGQLEDIPQQEKQPQQQQQ--------------------ETFHVLAVDDSLID 60
P++E R G ED+P P + QQ +T VL V++
Sbjct: 33 PEEEEWRNGMGEDLPNGHSTPPEPQQTDEQKEHQVQIVRWERFLPVKTLRVLLVENDDST 92
Query: 61 RKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTD 120
R+++ LLR Y+V ++G A + L ++L+N+ ++L++T+
Sbjct: 93 RQVVSALLRKCCYEVIPAENGLHAWQCL---EDLQNH----------------IDLVLTE 133
Query: 121 YCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLE 179
MP ++G LL ++ KD+PV++MSS + V CL +GA +FL+KP+R ++L+
Sbjct: 134 VVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELK 193
Query: 180 KLQPRLLK 187
L + +
Sbjct: 194 NLWQHVWR 201
>gi|24796813|gb|AAN64489.1| putative pseudo-response regulator [Oryza sativa Japonica Group]
Length = 789
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 95/197 (48%), Gaps = 46/197 (23%)
Query: 18 LLENI----PQQE--REGQLEDIPQQEKQPQQQQQ--------------------ETFHV 51
+LEN P++E R G ED+P P + QQ +T V
Sbjct: 24 ILENGHSHKPEEEEWRNGMGEDLPNGHSTPPEPQQTDEQKEHQVQIVRWERFLPVKTLRV 83
Query: 52 LAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEE 111
L V++ R+++ LLR Y+V ++G A + L ++L+N+
Sbjct: 84 LLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWQCL---EDLQNH-------------- 126
Query: 112 SRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++L++T+ MP ++G LL ++ KD+PV++MSS + V CL +GA +FL+
Sbjct: 127 --IDLVLTEVVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLV 184
Query: 171 KPVRLSDLEKLQPRLLK 187
KP+R ++L+ L + +
Sbjct: 185 KPIRKNELKNLWQHVWR 201
>gi|344207296|ref|YP_004792437.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
JV3]
gi|343778658|gb|AEM51211.1| multi-sensor hybrid histidine kinase [Stenotrophomonas maltophilia
JV3]
Length = 724
Score = 70.1 bits (170), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 24/129 (18%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL+ + ++V CVD G+ L+ L
Sbjct: 459 SMQILVADDHEANRMVLQRLLQKAGHRVLCVDGGEAVLDALA------------------ 500
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
+S + ++ D MPGM+G D+LK L+V PV+V+S++ P + C + G
Sbjct: 501 ---DSEFDAVIVDLHMPGMSGLDMLKELRVMQAGGGPRTPVLVLSADVTPEAIQRCTQAG 557
Query: 165 AEEFLLKPV 173
A FL KPV
Sbjct: 558 AHAFLAKPV 566
>gi|357126386|ref|XP_003564868.1| PREDICTED: uncharacterized protein LOC100824670 [Brachypodium
distachyon]
Length = 577
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +LR SY+VT ALE L ++
Sbjct: 14 VLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALEIL-------------------RER 54
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+S+ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 55 KSKFDIVISDVNMPDMDGFKLLEHIGLE--MDLPVIMMSIDGETSRVMKGVQHGACDYLL 112
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L + + +
Sbjct: 113 KPVRMKELRNIWQHVYR 129
>gi|297736458|emb|CBI25329.3| unnamed protein product [Vitis vinifera]
Length = 769
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 86/164 (52%), Gaps = 26/164 (15%)
Query: 35 PQQEKQPQQQQQETF------HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQQ+ Q + E F VL V++ R+++ LLR SY+VT V +G ++
Sbjct: 74 PQQQPQGPIVRWERFLPLRSLKVLLVENDNSTRQVVSALLRNCSYEVTAVANG---VQAW 130
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVV 147
++D+L N+ V+L++ + +P ++G LL K + + K++PV++
Sbjct: 131 SILDDLTNH----------------VDLVLAEVALPSLSGIGLLCKIMNHKACKNIPVIM 174
Query: 148 MSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNR 191
MSS + V CL +GA +F +KP+R ++L+ L + + +R
Sbjct: 175 MSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHVWRKFHR 218
>gi|359486449|ref|XP_002275645.2| PREDICTED: two-component response regulator-like PRR73 [Vitis
vinifera]
Length = 747
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 86/164 (52%), Gaps = 26/164 (15%)
Query: 35 PQQEKQPQQQQQETF------HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQQ+ Q + E F VL V++ R+++ LLR SY+VT V +G ++
Sbjct: 52 PQQQPQGPIVRWERFLPLRSLKVLLVENDNSTRQVVSALLRNCSYEVTAVANG---VQAW 108
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVV 147
++D+L N+ V+L++ + +P ++G LL K + + K++PV++
Sbjct: 109 SILDDLTNH----------------VDLVLAEVALPSLSGIGLLCKIMNHKACKNIPVIM 152
Query: 148 MSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNR 191
MSS + V CL +GA +F +KP+R ++L+ L + + +R
Sbjct: 153 MSSHDSVGIVFKCLSKGAVDFFVKPIRKNELKNLWQHVWRKFHR 196
>gi|66809777|ref|XP_638612.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
gi|3183160|sp|Q23917.1|PDE2_DICDI RecName: Full=3',5'-cyclic-nucleotide phosphodiesterase regA;
Short=PDEase regA; AltName: Full=Phosphodiesterase 2;
Short=DdPDE2; AltName: Full=Response regulator protein
A; AltName: Full=cAMP-specific 3',5'-cAMP
phosphodiesterase 2
gi|1405368|gb|AAB03508.1| RegA [Dictyostelium discoideum]
gi|3046777|emb|CAA06513.1| RegA [Dictyostelium discoideum]
gi|60467179|gb|EAL65213.1| cAMP phosphodiesterase [Dictyostelium discoideum AX4]
Length = 793
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 65/125 (52%), Gaps = 21/125 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + RKIL NLL+ Y VT V +G+ A EY+ K
Sbjct: 162 ILVADDDDVQRKILNNLLKKFHYNVTLVPNGEIAWEYIN-------------------KG 202
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTM-CLEEGAEEF 168
+ + +L++TD MP +TG+DLL+R+ + +PV++MS V + ++ G ++F
Sbjct: 203 QQKYDLVLTDVMMPHITGFDLLQRINDHPVHRHIPVILMSGTAVDYKYANDTIKIGGQDF 262
Query: 169 LLKPV 173
L KP+
Sbjct: 263 LTKPI 267
>gi|326500594|dbj|BAJ94963.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 623
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD K+LENLLR Y VT AL L ++
Sbjct: 24 VLAVDDDPTCLKVLENLLRRCDYHVTTTGQAATALRML-------------------REN 64
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ + +L+++D MP M G+ LL+ + + D+PV+++S+ V + GA ++LL
Sbjct: 65 KDQFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSANGETQTVMKGITHGACDYLL 122
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRK 222
KPVRL L+ + +++ + N SDND+ ++ N ++ K
Sbjct: 123 KPVRLEQLKTIWQHVIRRNTK----NRGSDNDDASQKGPNAEGENGGANRNK 170
>gi|302782157|ref|XP_002972852.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
gi|300159453|gb|EFJ26073.1| hypothetical protein SELMODRAFT_450934 [Selaginella moellendorffii]
Length = 639
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 20/132 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+D R ++ LLR YQV +G L+ L+D+
Sbjct: 44 VLLVEDDDSTRHVVAALLRNCGYQVVPAANG---LQAWSLLDD----------------R 84
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++L++TD MPG++G LL + + + + VPVV+MSS + + V CL +GA +FL
Sbjct: 85 NREIDLVLTDVVMPGLSGLGLLSKIMHHKNHQKVPVVMMSSHDSTNVVFKCLTKGAADFL 144
Query: 170 LKPVRLSDLEKL 181
+KPVR ++L+ L
Sbjct: 145 VKPVRKNELKNL 156
>gi|357464211|ref|XP_003602387.1| Two-component response regulator-like PRR73 [Medicago truncatula]
gi|355491435|gb|AES72638.1| Two-component response regulator-like PRR73 [Medicago truncatula]
Length = 685
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 30/194 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+ R+I+ LLR +Y+V V G KA E L K
Sbjct: 58 VLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEIL-------------------KGR 98
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++LI+T+ +P ++GY LL ++ K +PV++MSS++ S V C+ GA ++L
Sbjct: 99 PRSIDLILTEVDLPAISGYALLTLIMEHDICKSIPVIMMSSQDSVSTVYKCMLRGAADYL 158
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSC------GNNEDSDNDNKNETSNYKSSTNSAFSKRKA 223
+KP+R+++L L + + +S G ++SD K E ++ N+A S R
Sbjct: 159 VKPIRINELRNLWQHVWRRQTQSAATAGINGPQDESDTQQKFEA----TAENNAASNRSG 214
Query: 224 LSAEAPERRPKMKE 237
A +R + E
Sbjct: 215 GDAACIQRNKDLIE 228
>gi|242278764|ref|YP_002990893.1| multi-sensor hybrid histidine kinase [Desulfovibrio salexigens DSM
2638]
gi|242121658|gb|ACS79354.1| multi-sensor hybrid histidine kinase [Desulfovibrio salexigens DSM
2638]
Length = 822
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 22/124 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L V+DSL LE +L ++V+ V +G+ AL+ L
Sbjct: 5 HILVVEDSLTQAVKLEYILFEKGFKVSLVSNGENALQLL--------------------- 43
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRL-KVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E+ V+L+++D MPGM GY+L +++ K S +KDVPV++++S + P + L+ GA F
Sbjct: 44 EDKDVDLVISDVVMPGMDGYELCEKIRKNSRYKDVPVILLTSLSEPGDIIKGLKSGATNF 103
Query: 169 LLKP 172
+ KP
Sbjct: 104 VTKP 107
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 65/143 (45%), Gaps = 25/143 (17%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+ +L V+D+ I+ + +LL + V +G +A+ L ID
Sbjct: 577 YSILLVEDNPINVLVATSLLEKMGHSVEVASNGLEAVSMLSGID---------------- 620
Query: 109 KEESRVNLIMTDYCMPGMTGYDL---LKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEG 164
V+L++ D MP M G+ ++R + + ++VP++ M++ + C + G
Sbjct: 621 -----VDLVLMDLEMPEMDGFSASMSIRRGRAGDAARNVPIIAMTAHAMTGVKDKCAKAG 675
Query: 165 AEEFLLKPVRLSDLEKLQPRLLK 187
+++ KPV+ DL + R +K
Sbjct: 676 MNDYIAKPVQYVDLRDVILRTMK 698
>gi|386718407|ref|YP_006184733.1| Sensory/regulatory protein rpfC [Stenotrophomonas maltophilia D457]
gi|384077969|emb|CCH12558.1| Sensory/regulatory protein rpfC [Stenotrophomonas maltophilia D457]
Length = 725
Score = 69.7 bits (169), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 24/129 (18%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL+ + ++V CVD G+ L+ L
Sbjct: 459 SMQILVADDHEANRMVLQRLLQKAGHRVLCVDGGEAVLDALA------------------ 500
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
+S + ++ D MPGM+G D+LK L+V PV+V+S++ P + C + G
Sbjct: 501 ---DSEFDAVIVDLHMPGMSGLDMLKELRVMQAGGGPRTPVLVLSADVTPEAIQRCTQAG 557
Query: 165 AEEFLLKPV 173
A FL KPV
Sbjct: 558 AHAFLAKPV 566
>gi|158513189|sp|A2XFB7.2|PRR73_ORYSI RecName: Full=Two-component response regulator-like PRR73; AltName:
Full=Pseudo-response regulator 73; Short=OsPRR73
Length = 767
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 87/182 (47%), Gaps = 40/182 (21%)
Query: 27 REGQLEDIPQQEKQPQQQQQ--------------------ETFHVLAVDDSLIDRKILEN 66
R G ED+P P + QQ +T VL V++ R+++
Sbjct: 39 RNGMGEDLPNGHSTPPEPQQTDEQKEHQVRIVRWERFLPVKTLRVLLVENDDSTRQVVSA 98
Query: 67 LLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGM 126
LLR Y+V ++G A + L ++L+N+ ++L++T+ MP +
Sbjct: 99 LLRKCCYEVIPAENGLHAWQCL---EDLQNH----------------IDLVLTEVVMPRL 139
Query: 127 TGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRL 185
+G LL ++ KD+PV++MSS + V CL +GA +FL+KP+R ++L+ L +
Sbjct: 140 SGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHV 199
Query: 186 LK 187
+
Sbjct: 200 WR 201
>gi|108707545|gb|ABF95340.1| Two-component response regulator-like PRR73, putative, expressed
[Oryza sativa Japonica Group]
Length = 473
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 91/188 (48%), Gaps = 42/188 (22%)
Query: 23 PQQE--REGQLEDIPQQEKQPQQQQQ--------------------ETFHVLAVDDSLID 60
P++E R G ED+P P + QQ +T VL V++
Sbjct: 33 PEEEEWRNGMGEDLPNGHSTPPEPQQTDEQKEHQVQIVRWERFLPVKTLRVLLVENDDST 92
Query: 61 RKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTD 120
R+++ LLR Y+V ++G A + L ++L+N+ ++L++T+
Sbjct: 93 RQVVSALLRKCCYEVIPAENGLHAWQCL---EDLQNH----------------IDLVLTE 133
Query: 121 YCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLE 179
MP ++G LL ++ KD+PV++MSS + V CL +GA +FL+KP+R ++L+
Sbjct: 134 VVMPRLSGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELK 193
Query: 180 KLQPRLLK 187
L + +
Sbjct: 194 NLWQHVWR 201
>gi|356536913|ref|XP_003536977.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 747
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 66/240 (27%)
Query: 26 EREGQLEDIPQQEKQPQQQQ-----QETFHV-------LAVDDSLIDRKILENLLRVSSY 73
E+ G +E Q+ PQ Q + H+ + +DDS R ++ LLR SY
Sbjct: 46 EQGGTVESSSVQQHIPQPQGAIICWERFLHIRSLKVLLVEIDDST--RHVVTALLRNCSY 103
Query: 74 QVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLL- 132
+V +G L+ ++++L N ++L++T+ MPG++G LL
Sbjct: 104 EVIEAANG---LQAWKILEDLTN----------------HIDLVLTEVAMPGLSGIGLLY 144
Query: 133 KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLL------ 186
K + + K++PVV+MSS + V CL +GA +FL+KP+R ++L+ L +
Sbjct: 145 KIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSS 204
Query: 187 ---------------------KSPNRSCGNNEDSDND----NKNETSNYKSSTNSAFSKR 221
KS N S N+ED DN+ N + S+ S T S+++KR
Sbjct: 205 SGSGSESGTQTQKSIKSKSLEKSDNNSGSNDED-DNESIGLNNVDGSDNGSGTQSSWTKR 263
>gi|379025846|dbj|BAL63700.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025848|dbj|BAL63701.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 664
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQ ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQFIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|225435163|ref|XP_002281776.1| PREDICTED: two-component response regulator-like PRR73-like [Vitis
vinifera]
Length = 785
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 79/141 (56%), Gaps = 20/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL V++ R ++ LLR SY+VT V +G L+ ++++L N+
Sbjct: 94 SLKVLLVENDDSTRHVVTALLRNCSYEVTAVANG---LQAWKILEDLTNH---------- 140
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+++++T+ MP ++G LL K + ++K++PV++MSS + V CL +GA
Sbjct: 141 ------IDIVLTEVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAV 194
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+FL+KP+R ++L+ L + +
Sbjct: 195 DFLVKPIRKNELKNLWQHVWR 215
>gi|15225720|ref|NP_178754.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|4309766|gb|AAD15535.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330250959|gb|AEC06053.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 136
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 43/51 (84%)
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
++++ + VV+MSSENVP+R++ CLE+GAEEF LKPV+L D KL+P ++K+
Sbjct: 11 AAFRSIHVVIMSSENVPTRISRCLEKGAEEFFLKPVKLVDHTKLKPHMMKT 61
>gi|379025622|dbj|BAL63588.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|379025624|dbj|BAL63589.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
gi|456359226|dbj|BAM93442.1| pseudo-response regulator [Triticum turgidum subsp. dicoccon]
Length = 186
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 80/161 (49%), Gaps = 27/161 (16%)
Query: 35 PQQEKQPQQQ------QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL 88
PQ+E Q + ++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 18 PQEEHAAQPRCWEEFLHRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL 77
Query: 89 GLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVV 146
+ +S ++L++T+ M G++G DLL R + KD+PV+
Sbjct: 78 -------------------QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVI 118
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+MSS + V CL GA +FL KP+R ++L+ L + +
Sbjct: 119 MMSSHDSMGTVLSCLSNGAADFLAKPIRKNELKNLWAHVWR 159
>gi|412992495|emb|CCO18475.1| predicted protein [Bathycoccus prasinos]
Length = 1199
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 70/140 (50%), Gaps = 21/140 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVL VDD I R + +LR Y+VT +SG +A+E L
Sbjct: 51 IHVLVVDDERICRAVTSQVLRKCGYRVTTCESGAEAIELL-------------------- 90
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ + NL++TD MP + G LL+ ++ S + +PV++MS+ V C+ GA++
Sbjct: 91 RRGTEFNLLLTDVMMPDIDGPKLLQHVRHHSQFSQLPVIMMSANQHSEIVFECVRSGADD 150
Query: 168 FLLKPVRLSDLEKLQPRLLK 187
+LLKPV + ++ L + +
Sbjct: 151 YLLKPVTVKQVKLLWQHVWR 170
>gi|325910798|dbj|BAJ83829.1| circadian response regulator 2b [Physcomitrella patens subsp.
patens]
Length = 917
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 76/138 (55%), Gaps = 20/138 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+D R ++ LLR +Y+VT V +G A GL++ E NSN
Sbjct: 188 VLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAW---GLLE--EANSN----------- 231
Query: 111 ESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+L++TD MP ++G LL K +K + K VP+V+MSS + V CL +GA ++L
Sbjct: 232 ---FDLVLTDVVMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYL 288
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KPVR ++L+ L + +
Sbjct: 289 VKPVRKNELKNLWQHVWR 306
>gi|168027173|ref|XP_001766105.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
gi|162682748|gb|EDQ69164.1| circadian clock protein PRR4 [Physcomitrella patens subsp. patens]
Length = 1056
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 76/138 (55%), Gaps = 20/138 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+D R ++ LLR +Y+VT V +G A GL++ E NSN
Sbjct: 308 VLLVEDDDATRHVVGALLRNCNYEVTPVANGSLAW---GLLE--EANSN----------- 351
Query: 111 ESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+L++TD MP ++G LL K +K + K VP+V+MSS + V CL +GA ++L
Sbjct: 352 ---FDLVLTDVVMPYLSGVGLLSKMMKREACKRVPIVIMSSYDSLGIVFRCLSKGACDYL 408
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KPVR ++L+ L + +
Sbjct: 409 VKPVRKNELKNLWQHVWR 426
>gi|195604808|gb|ACG24234.1| two-component response regulator-like PRR73 [Zea mays]
Length = 765
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 80/149 (53%), Gaps = 20/149 (13%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
+T VL V++ R+++ LLR Y+V ++G A YL ++L+NN
Sbjct: 80 KTLRVLLVENDDSTRQVVSALLRKCCYEVIPAENGLHAWRYL---EDLQNN--------- 127
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGA 165
++L++T+ M ++G LL ++ KD+PV++MS+ + S V CL +GA
Sbjct: 128 -------IDLVLTEVFMTCLSGIGLLSKITSHKICKDIPVIMMSTNDSMSMVFKCLSKGA 180
Query: 166 EEFLLKPVRLSDLEKLQPRLLKSPNRSCG 194
+FL+KP+R ++L+ L + + + S G
Sbjct: 181 VDFLVKPLRKNELKNLWQHVWRRCHSSSG 209
>gi|186681656|ref|YP_001864852.1| response regulator receiver protein [Nostoc punctiforme PCC 73102]
gi|186464108|gb|ACC79909.1| response regulator receiver protein [Nostoc punctiforme PCC 73102]
Length = 157
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 80/133 (60%), Gaps = 6/133 (4%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQ--VTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+L V+DS D ++L+ L+R+ S Q + +GD+ LE+L +++++ L
Sbjct: 9 LLVVEDSNEDFRMLQRLMRLMSVQNPIHRCTNGDEVLEFLY---QQGSDAHSKGENLPNS 65
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
K R ++I+ D +PG+ G D+L RLK S+K++P+VV ++ + P + +C ++GA
Sbjct: 66 KVALRPSVILLDLNLPGIDGRDILDRLKQDKSFKEIPIVVFTTSSNPKDIELCYQKGANG 125
Query: 168 FLLKPVRLSDLEK 180
+L+KP+ +L+K
Sbjct: 126 YLVKPMDAQELKK 138
>gi|386829043|ref|ZP_10116150.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
gi|386429927|gb|EIJ43755.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
Length = 120
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 71/130 (54%), Gaps = 22/130 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L VDDS D +++N+L YQ + +G++ ++ K
Sbjct: 3 HILIVDDSPTDAYLVKNILESQGYQTSEASNGEEGIQ---------------------KA 41
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRL-KVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+E + NLI+ D MPG+ G+ +++ K K +PV+++SS+++ S L +GA+EF
Sbjct: 42 KEIKPNLIIMDVVMPGLNGFQATRKITKSEDTKSIPVIIVSSKDMESDRAWGLMQGAKEF 101
Query: 169 LLKPVRLSDL 178
L+KPV+ ++L
Sbjct: 102 LVKPVKQAEL 111
>gi|346992834|ref|ZP_08860906.1| two-component hybrid sensor and regulator [Ruegeria sp. TW15]
Length = 520
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 62/124 (50%), Gaps = 22/124 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD +R +L L +QV D G ALE K
Sbjct: 176 ILVVDDVEANRTLLARRLERDGHQVWTADGGYSALE---------------------KLS 214
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +L++ D MP + GYD+LKRLK + W+D+PV+++S+ + V C+E GAE++L
Sbjct: 215 QHAFDLVLLDLMMPDLNGYDVLKRLKENDDWRDIPVIMISAFDEIESVARCVEIGAEDYL 274
Query: 170 LKPV 173
KP
Sbjct: 275 PKPF 278
>gi|456359290|dbj|BAM93474.1| pseudo-response regulator [Triticum turgidum subsp. pyramidale]
Length = 664
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ ++++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTQQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|440729809|ref|ZP_20909922.1| regulation of pathogenicity factor rpfc protein [Xanthomonas
translucens DAR61454]
gi|440380460|gb|ELQ17026.1| regulation of pathogenicity factor rpfc protein [Xanthomonas
translucens DAR61454]
Length = 486
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 62/125 (49%), Gaps = 23/125 (18%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD +R +L+ +L+ + ++ CVD + L+ L
Sbjct: 224 ILVADDHAANRMVLQRILQKAGHRAICVDGAEAVLDAL---------------------A 262
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV--SSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
ES + ++ D MPGM+G D+LK+L+V + PVVV+S++ P + C + GA F
Sbjct: 263 ESEFDAVIVDLHMPGMSGLDMLKQLRVMQAGGPRTPVVVLSADVTPESIQRCEQAGAHTF 322
Query: 169 LLKPV 173
L KP+
Sbjct: 323 LAKPL 327
>gi|297746178|emb|CBI16234.3| unnamed protein product [Vitis vinifera]
Length = 482
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 79/141 (56%), Gaps = 20/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL V++ R ++ LLR SY+VT V +G L+ ++++L N+
Sbjct: 94 SLKVLLVENDDSTRHVVTALLRNCSYEVTAVANG---LQAWKILEDLTNH---------- 140
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+++++T+ MP ++G LL K + ++K++PV++MSS + V CL +GA
Sbjct: 141 ------IDIVLTEVVMPFISGIGLLCKIMSHKTFKNIPVIMMSSHDSMGIVFKCLSKGAV 194
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+FL+KP+R ++L+ L + +
Sbjct: 195 DFLVKPIRKNELKNLWQHVWR 215
>gi|356518667|ref|XP_003528000.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 700
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 77/151 (50%), Gaps = 22/151 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR SY+V V G KA E L K
Sbjct: 54 LVEADDST--RQIIAALLRKCSYKVAAVPDGLKAWELL-------------------KGR 92
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
V+LI+T+ +P ++GY LL ++ K++PV++MSS++ S V C+ GA ++L
Sbjct: 93 PHNVDLILTEVDLPSVSGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYL 152
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD 200
+KP+R ++L L + + + + G N D
Sbjct: 153 VKPIRKNELRNLWQHVWRRQSSTTGINGPQD 183
>gi|90425451|ref|YP_533821.1| two component sigma54 specific Fis family transcriptional regulator
[Rhodopseudomonas palustris BisB18]
gi|90107465|gb|ABD89502.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris BisB18]
Length = 500
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ VDSGD A+E L T +
Sbjct: 5 ILIADDDAVQRRLVENMVQKCGYRTVVVDSGDAAIETL------------------TADD 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ ++ D MPG+ G +L+R++ + +PV+V ++ V + GA +F++
Sbjct: 47 APTIDAVVLDLVMPGLDGMGVLERMR-DAGLSIPVIVQTAHGGIDNVVSAMRAGATDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQISLRNALNASALKGE 129
>gi|312282885|dbj|BAJ34308.1| unnamed protein product [Thellungiella halophila]
Length = 380
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 83/165 (50%), Gaps = 24/165 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD +ILE +L YQVT D AL L ++
Sbjct: 13 VLVVDDDTSCLRILEQMLLRLMYQVTICSQADVALNIL-------------------RER 53
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +L+++D MPGM GY LL+++ + D+PV++MS + + V + GA ++L+
Sbjct: 54 KGCFDLVLSDVHMPGMNGYKLLQQVGLE--MDLPVIMMSVDGRTTTVMKGINHGACDYLI 111
Query: 171 KPVRLSDLEKLQPRLLK---SPNRSCGNNEDSDNDNKNETSNYKS 212
KP+R +L+ + +++ + N+ N + DNKN +S+ ++
Sbjct: 112 KPIRPEELKNIWQHVVRRKWTMNKELQRNSQALEDNKNSSSSLET 156
>gi|147776739|emb|CAN72415.1| hypothetical protein VITISV_027904 [Vitis vinifera]
Length = 991
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DDS R+I+ LLR SY+V V G KA E L K E V
Sbjct: 59 DDS--TRQIIAALLRKCSYKVAAVSDGLKAWEAL-------------------KGEPQNV 97
Query: 115 NLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+LI+T+ +P ++G+ LL + K +PV++MSS + S V C+ +GA +FL+KPV
Sbjct: 98 DLILTEVELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPV 157
Query: 174 RLSDLEKLQPRLLK---------SPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRKAL 224
R ++L L + + S N S N+ + N SN+ S + K+K
Sbjct: 158 RKNELXNLWQHVWRRHAPTXGHVSQNLSIAQNKVEVSSXNNTASNHSSDYVVSAQKKKEC 217
Query: 225 S 225
S
Sbjct: 218 S 218
>gi|157399680|gb|ABV53464.1| pseudo-response regulator 5 [Castanea sativa]
Length = 698
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 78/150 (52%), Gaps = 22/150 (14%)
Query: 52 LAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEE 111
+ DDS R+I+ LLR SY+VT V G KA E L +
Sbjct: 67 IEADDST--RQIIGALLRKCSYRVTAVPDGLKAWEIL-------------------RGRP 105
Query: 112 SRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++LI+T+ +P ++G+ LL + K++PV++MS+++ S V C+ GA ++L+
Sbjct: 106 HNIDLILTEVDLPAISGFALLTLIAEHEICKNIPVIMMSAQDSVSTVYKCMLRGAADYLV 165
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSD 200
KP+R ++L+ L + + + + G N+ D
Sbjct: 166 KPIRRNELKNLWQHVWRKQSSNLGINDPQD 195
>gi|323388735|gb|ADX60172.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 24/157 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD KILENLL Y VT AL+ L +++
Sbjct: 28 VLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLL-------------------REK 68
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ + +L+++D MP M G+ LL+ + + D+PV+++S+ V + GA ++LL
Sbjct: 69 KDQFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSANGETQTVMKGITHGACDYLL 126
Query: 171 KPVRLSDLEKLQPRLLKSPNRSC-GNNEDSDNDNKNE 206
KPVR+ L + +++ RSC N +DND+ +
Sbjct: 127 KPVRIEQLRTIWQHVVR--RRSCDAKNSGNDNDDSGK 161
>gi|162460462|ref|NP_001104863.1| response regulator 9 [Zea mays]
gi|14189890|dbj|BAB55874.1| response regulator 9 [Zea mays]
Length = 631
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 24/157 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD KILENLL Y VT AL+ L +++
Sbjct: 28 VLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLL-------------------REK 68
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ + +L+++D MP M G+ LL+ + + D+PV+++S+ V + GA ++LL
Sbjct: 69 KDQFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSANGETQTVMKGITHGACDYLL 126
Query: 171 KPVRLSDLEKLQPRLLKSPNRSC-GNNEDSDNDNKNE 206
KPVR+ L + +++ RSC N +DND+ +
Sbjct: 127 KPVRIEQLRTIWQHVVR--RRSCDAKNSGNDNDDSGK 161
>gi|323388705|gb|ADX60157.1| ARR-B transcription factor [Zea mays]
Length = 631
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 78/157 (49%), Gaps = 24/157 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD KILENLL Y VT AL+ L +++
Sbjct: 28 VLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLL-------------------REK 68
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ + +L+++D MP M G+ LL+ + + D+PV+++S+ V + GA ++LL
Sbjct: 69 KDQFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSANGETQTVMKGITHGACDYLL 126
Query: 171 KPVRLSDLEKLQPRLLKSPNRSC-GNNEDSDNDNKNE 206
KPVR+ L + +++ RSC N +DND+ +
Sbjct: 127 KPVRIEQLRTIWQHVVR--RRSCDAKNSGNDNDDSGK 161
>gi|242085174|ref|XP_002443012.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
gi|241943705|gb|EES16850.1| hypothetical protein SORBIDRAFT_08g006300 [Sorghum bicolor]
Length = 551
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 19/153 (12%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD + KILE L+ +Y T V AL+ L +KE
Sbjct: 12 VLAVDDDRVCLKILERQLKYCNYNATVVSDARTALD-----------------MLRERKE 54
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV+++S+ + + ++ GA ++++
Sbjct: 55 GNQFDLVISDVIMPNMDGFKLLELIGLE--MDLPVIMLSANSETQTIMKGIKHGACDYMV 112
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDN 203
KPVRL L + ++K+ NN +S +D+
Sbjct: 113 KPVRLEQLRGIWTHVVKNSMNDPQNNINSGSDD 145
>gi|90020314|ref|YP_526141.1| response regulator receiver domain-containing protein [Saccharophagus
degradans 2-40]
gi|89949914|gb|ABD79929.1| GGDEF domain [Saccharophagus degradans 2-40]
Length = 1526
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 23/157 (14%)
Query: 23 PQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGD 82
P++E +E Q E + + T+H+L VDD ++RK+L N L + Y V V SG
Sbjct: 1120 PEEELNEPVEIRAQAESKSDTAR--TYHILIVDDEPVNRKVLANYLSLKYYTVHEVRSGM 1177
Query: 83 KALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWK 141
+A+ Y+ + +V+LI+ D MP M+GY+ K+L+ S
Sbjct: 1178 EAITYV--------------------RNGPKVDLILLDIMMPKMSGYEACKQLRQQYSAN 1217
Query: 142 DVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDL 178
++P++++++ + S + GA +F+ KP+ +L
Sbjct: 1218 ELPIILLTARSQVSDLVTGFNSGANDFITKPIAKEEL 1254
>gi|220906186|ref|YP_002481497.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
gi|219862797|gb|ACL43136.1| response regulator receiver protein [Cyanothece sp. PCC 7425]
Length = 406
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 71/147 (48%), Gaps = 30/147 (20%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T +L VDD+LI+R +L L + V ++G +AL+ L
Sbjct: 173 TGKILVVDDTLINRDLLSRRLERQGHTVKLSENGQQALQLL------------------- 213
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
E +L++ D MP M G +LL+ +K +WKD+PV+++S+ + C+E GAE
Sbjct: 214 --ESQSFDLVLLDVIMPKMNGLELLRLMKDTPNWKDIPVIMISALDEVESAVRCIELGAE 271
Query: 167 EFLLKPVRLSDLEKLQPRLLKSPNRSC 193
++L KP LLK+ ++C
Sbjct: 272 DYLTKP--------FNTILLKARIKAC 290
>gi|297798770|ref|XP_002867269.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297313105|gb|EFH43528.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 73/137 (53%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD +IL+ LL Y VT + ALE L ++
Sbjct: 19 VLAVDDDQTCLRILQTLLHRCQYHVTTTNQAQTALELL-------------------REN 59
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+++ +L+++D MP M G+ LL+ + + D+PV+++S+ + P V ++ GA ++LL
Sbjct: 60 KNKFDLVISDVDMPDMDGFKLLELVGLE--MDLPVIMLSAHSDPKYVMKGVKHGACDYLL 117
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L+ + +++
Sbjct: 118 KPVRIEELKNIWQHVVR 134
>gi|114776750|ref|ZP_01451793.1| Periplasmic Sensor Hybrid Histidine Kinase [Mariprofundus
ferrooxydans PV-1]
gi|114552836|gb|EAU55267.1| Periplasmic Sensor Hybrid Histidine Kinase [Mariprofundus
ferrooxydans PV-1]
Length = 841
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/138 (23%), Positives = 78/138 (56%), Gaps = 21/138 (15%)
Query: 42 QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
++QQ + H+L +D+ +++++++ +L+ + + V + G++AL+ L
Sbjct: 577 RKQQLKPLHILLAEDNAVNQEVMQEVLKKAGHNVQLAEDGEQALDALA------------ 624
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMC 160
+++ +L++ D MP +G D+LK+ + + + PV+++S++ +P + C
Sbjct: 625 --------GDTQFDLVLLDMNMPKASGLDVLKQFRFMDTTGKTPVLMLSADALPDTIREC 676
Query: 161 LEEGAEEFLLKPVRLSDL 178
++ GA ++L KPV+L+ L
Sbjct: 677 MDAGANDYLTKPVQLASL 694
>gi|356509155|ref|XP_003523317.1| PREDICTED: two-component response regulator-like APRR9-like
[Glycine max]
Length = 655
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 76/147 (51%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR SY+V V G KA E L K
Sbjct: 53 LVEADDST--RQIIAALLRKCSYKVVAVPDGLKAWELL-------------------KGR 91
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
V+LI+T+ +P ++GY LL ++ K++PV++MSS++ S V C+ GA ++L
Sbjct: 92 PHNVDLILTEVDLPSISGYALLTLIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYL 151
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNN 196
+KP+R ++L L + + + + G N
Sbjct: 152 VKPIRKNELRNLWQHVWRRQSSTTGIN 178
>gi|346320308|gb|EGX89909.1| autoinducer 2 sensor kinase/phosphatase luxQ [Cordyceps militaris
CM01]
Length = 1379
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
Query: 32 EDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI 91
+D+P+ E+ FH+L V+D+ +++KI +R +QVT +G +ALEY +
Sbjct: 1093 QDLPRSERA-------AFHILVVEDNAVNQKIATRTIRKLGFQVTATWNGREALEY---V 1142
Query: 92 DNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-----WKDVPVV 146
NA P ++I+ D MP + GY ++ DVP+V
Sbjct: 1143 LGASEGRNAKP------------DIILMDVQMPIIDGYKCTHLMRHHRPYKGLIHDVPIV 1190
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSC-----GNNEDSDN 201
M++ + C + G +++L KPV +S LE++ R S R ++ S+
Sbjct: 1191 AMTASAIQGDREKCKKAGMDDYLAKPVTMSILERMLIRWCISRRRETPLPDHATSDCSEQ 1250
Query: 202 DNKNETSN---YKSSTNSAFSK 220
+TSN + N+AFSK
Sbjct: 1251 SEHCDTSNVPQIAVANNAAFSK 1272
>gi|225453624|ref|XP_002266192.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 641
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DDS R+I+ LLR SY+V V G KA E L K E V
Sbjct: 59 DDST--RQIIAALLRKCSYKVAAVSDGLKAWEAL-------------------KGEPQNV 97
Query: 115 NLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+LI+T+ +P ++G+ LL + K +PV++MSS + S V C+ +GA +FL+KPV
Sbjct: 98 DLILTEVELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPV 157
Query: 174 RLSDLEKLQPRLLK---------SPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRKAL 224
R ++L L + + S N S N+ + N SN+ S + K+K
Sbjct: 158 RKNELRNLWQHVWRRHAPTSGHVSQNLSIAQNKVEVSSENNTASNHSSDYVVSAQKKKEC 217
Query: 225 S 225
S
Sbjct: 218 S 218
>gi|242070155|ref|XP_002450354.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
gi|241936197|gb|EES09342.1| hypothetical protein SORBIDRAFT_05g004150 [Sorghum bicolor]
Length = 694
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 77/153 (50%), Gaps = 19/153 (12%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD + KILE L+ +Y T V AL+ L +K+
Sbjct: 12 VLAVDDDRVCLKILERQLKYCNYNATVVTDARTALDML-----------------RERKD 54
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV+++S+ N + ++ GA ++++
Sbjct: 55 GNQFDLVISDVVMPNMDGFKLLELIGLE--MDLPVIMLSANNETQTIMKGIKHGACDYIV 112
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDN 203
KPVRL L + ++K+ N S ND+
Sbjct: 113 KPVRLEQLRGIWTHVVKNGKTDPRNTISSGNDD 145
>gi|381171602|ref|ZP_09880745.1| sensory/regulatory protein RpfC [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687975|emb|CCG37232.1| sensory/regulatory protein RpfC [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 726
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL + ++VTCV+ ++ L+ +
Sbjct: 461 SMRMLVADDHEANRMVLQRLLEKAGHKVTCVNGAEQVLDVMA------------------ 502
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
+ + ++ D MPGM+G D+LK+L+V S + PVVV+S++ P + C + G
Sbjct: 503 ---DEDFDAVIVDLHMPGMSGLDMLKQLRVMQASGIRYTPVVVLSADVTPEAIRACEQAG 559
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV + L
Sbjct: 560 ARAFLAKPVVAAKL 573
>gi|387126714|ref|YP_006295319.1| regulator of pathogenicity factors [Methylophaga sp. JAM1]
gi|386273776|gb|AFI83674.1| regulator of pathogenicity factors [Methylophaga sp. JAM1]
Length = 858
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 44/178 (24%), Positives = 90/178 (50%), Gaps = 25/178 (14%)
Query: 13 QEKQQLLENIPQQEREGQLED---IPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLR 69
+EK L I + ++D I + Q ++ ++L +D+L+++++LE +LR
Sbjct: 557 KEKPVLFNAIHAAQSNHAIQDEKVITLAQHYAAQSYAKSLNILIAEDNLVNQQVLEGILR 616
Query: 70 VSSYQVTCVDSGDKALEYLGL-IDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTG 128
+ +QV SG++AL+ L ID++E +++ D MP +G
Sbjct: 617 HAGHQVILASSGEQALDVLSQQIDSIE--------------------MLILDMNMPDYSG 656
Query: 129 YDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRL 185
++++ ++ + + D+P+++++++ P CLE GA EFL KP+ L + RL
Sbjct: 657 TEVIRAMRYMDTGHDIPIIILTADATPQAKQRCLEAGANEFLTKPIDSRSLLESVARL 714
>gi|294666715|ref|ZP_06731951.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292603540|gb|EFF46955.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 726
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL + ++VTCV+ ++ L+ +
Sbjct: 461 SMRMLVADDHEANRMVLQRLLEKAGHKVTCVNGAEQVLDVMA------------------ 502
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
+ + ++ D MPGM+G D+LK+L+V S + PVVV+S++ P + C + G
Sbjct: 503 ---DEDFDAVIVDLHMPGMSGLDMLKQLRVMQASGIRYTPVVVLSADVTPEAIRACEQAG 559
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV + L
Sbjct: 560 ARAFLAKPVVAAKL 573
>gi|168015656|ref|XP_001760366.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688380|gb|EDQ74757.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 262
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 21/148 (14%)
Query: 40 QPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSN 99
P+ VL VDD + KILE +LR Y VT +S KAL L
Sbjct: 6 HPEGFSPAGLKVLVVDDDNVILKILERMLRECKYAVTTCNSATKALAML----------- 54
Query: 100 ASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTM 159
++ S +L+++D MP M G+ LL+ + + D+PV++MS + V
Sbjct: 55 --------RENRSYFDLVISDVYMPDMDGFKLLEAIGLEL--DLPVIMMSRDGEIDSVMR 104
Query: 160 CLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
++ GA ++LLKPVRL +L + +++
Sbjct: 105 GIKHGACDYLLKPVRLEELRNIWQHVVR 132
>gi|15236580|ref|NP_194920.1| two-component response regulator ARR10 [Arabidopsis thaliana]
gi|38257358|sp|O49397.1|ARR10_ARATH RecName: Full=Two-component response regulator ARR10; AltName:
Full=Receiver-like protein 4
gi|2827643|emb|CAA16597.1| predicted protein [Arabidopsis thaliana]
gi|3549641|emb|CAA06432.1| receiver-like protein 4 [Arabidopsis thaliana]
gi|7270096|emb|CAB79910.1| predicted protein [Arabidopsis thaliana]
gi|27808620|gb|AAO24590.1| At4g31920 [Arabidopsis thaliana]
gi|110736270|dbj|BAF00105.1| predicted protein [Arabidopsis thaliana]
gi|332660579|gb|AEE85979.1| two-component response regulator ARR10 [Arabidopsis thaliana]
Length = 552
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 74/137 (54%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD +IL+ LL+ Y VT + ALE L ++
Sbjct: 19 VLAVDDDQTCLRILQTLLQRCQYHVTTTNQAQTALELL-------------------REN 59
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+++ +L+++D MP M G+ LL+ + + D+PV+++S+ + P V ++ GA ++LL
Sbjct: 60 KNKFDLVISDVDMPDMDGFKLLELVGLE--MDLPVIMLSAHSDPKYVMKGVKHGACDYLL 117
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L+ + +++
Sbjct: 118 KPVRIEELKNIWQHVVR 134
>gi|356542579|ref|XP_003539744.1| PREDICTED: LOW QUALITY PROTEIN: two-component response
regulator-like PRR37-like [Glycine max]
Length = 777
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 75/138 (54%), Gaps = 20/138 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+D R ++ LL+ SY+VT V +G +A + L +
Sbjct: 75 VLLVEDDDSTRHVVRALLQNCSYKVTAVSNGLQAWKVL-------------------EDP 115
Query: 111 ESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E+ ++L++T+ MP ++G LL K + + K++PV++MSS + V CL +GA +FL
Sbjct: 116 ENGIDLVLTEVAMPILSGIGLLCKIMSHKTLKNIPVIMMSSHDSMGIVFKCLSKGAVDFL 175
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KP+R ++L+ L + +
Sbjct: 176 VKPIRRNELKNLWQHVWR 193
>gi|407783713|ref|ZP_11130909.1| two-component hybrid sensor and regulator, chemotaxis family,
sensor kinase [Oceanibaculum indicum P24]
gi|407200309|gb|EKE70318.1| two-component hybrid sensor and regulator, chemotaxis family,
sensor kinase [Oceanibaculum indicum P24]
Length = 913
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDDS R +L LL V+ Y+VT ++ AL Y E
Sbjct: 796 VLLVDDSPFFRNLLTPLLTVAGYEVTAAENASTALSYC---------------------E 834
Query: 111 ESR-VNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E R ++I++D MPGM+G+D K ++ S W+DVP+V +SS P + E G +++
Sbjct: 835 EGRDFDVIVSDIEMPGMSGFDFAKAVRESRWQDVPMVALSSHTSPRDLDRGREAGFNDYV 894
Query: 170 LKPVRLSDLEKL 181
K R + L+ L
Sbjct: 895 AKDDRDALLQTL 906
>gi|95930319|ref|ZP_01313056.1| multi-sensor hybrid histidine kinase [Desulfuromonas acetoxidans
DSM 684]
gi|95133571|gb|EAT15233.1| multi-sensor hybrid histidine kinase [Desulfuromonas acetoxidans
DSM 684]
Length = 1152
Score = 67.8 bits (164), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 74/142 (52%), Gaps = 22/142 (15%)
Query: 32 EDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI 91
E ++ PQ Q++ F +L VDD ++ ++L N L V+ Y+V +SG +AL+ +
Sbjct: 700 EHAAEEATPPQTQEEGDFSILVVDDEPVNLQVLVNQLHVARYRVRIANSGQQALDLV--- 756
Query: 92 DNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSS 150
EE +LI+ D MP MTGY++ +RL+ + + +PV+++++
Sbjct: 757 ------------------EEETPDLILLDIMMPHMTGYEVCQRLRRTYNAAQLPVIMLTA 798
Query: 151 ENVPSRVTMCLEEGAEEFLLKP 172
+ S V + GA +++ KP
Sbjct: 799 RSRVSDVVQGFQAGANDYVAKP 820
>gi|297737623|emb|CBI26824.3| unnamed protein product [Vitis vinifera]
Length = 428
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 28/174 (16%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
VL VDD + KILE +LR Y VT AL L +
Sbjct: 33 LRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNIL-------------------R 73
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+++ +++++D MP M GY LL+ + + D+PV++MS++ S V + GA ++
Sbjct: 74 EKKGCFDIVLSDVHMPDMDGYKLLEHVGLE--MDLPVIMMSADGRTSAVMRGIRHGACDY 131
Query: 169 LLKPVRLSDLEKLQPRLLKSP------NRSCGNNEDSDNDNK-NETSNYKSSTN 215
L+KP+R +L+ + +++ + G+ ED+D + E + Y SS N
Sbjct: 132 LIKPIREEELKNIWQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAEYASSVN 185
>gi|294624915|ref|ZP_06703570.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292600794|gb|EFF44876.1| sensory/regulatory protein RpfC [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
Length = 726
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL + ++VTCV+ ++ L+ +
Sbjct: 461 SMRMLVADDHEANRMVLQRLLEKAGHKVTCVNGAEQVLDVMA------------------ 502
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
+ + ++ D MPGM+G D+LK+L+V S + PVVV+S++ P + C + G
Sbjct: 503 ---DEDFDAVIVDLHMPGMSGLDMLKQLRVMQASGIRYTPVVVLSADVTPEAIRACEQAG 559
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV + L
Sbjct: 560 ARAFLAKPVVAAKL 573
>gi|380512646|ref|ZP_09856053.1| regulation of pathogenicity factor rpfc protein [Xanthomonas
sacchari NCPPB 4393]
Length = 726
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 63/125 (50%), Gaps = 23/125 (18%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD +R +L+ +L+ + ++V CVD + L+ L
Sbjct: 467 ILVADDHAANRMVLQRMLQKAGHRVICVDGAEAVLDALA--------------------- 505
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV--SSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E+ + ++ D MPGM+G D+L++L+V + PVVV+S++ P + C + GA F
Sbjct: 506 ETEFDAVIVDLHMPGMSGLDMLRQLRVMQAGGPRTPVVVLSADVTPESIQRCEQAGARTF 565
Query: 169 LLKPV 173
L KPV
Sbjct: 566 LAKPV 570
>gi|356545957|ref|XP_003541399.1| PREDICTED: two-component response regulator-like APRR7-like
[Glycine max]
Length = 749
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 75/134 (55%), Gaps = 22/134 (16%)
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DDS R ++ LLR SY+V +D+ + L+ ++++L N +
Sbjct: 89 DDST--RHVVTALLRNCSYEV--IDAAN-GLQAWKILEDLTN----------------HI 127
Query: 115 NLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+LI+T+ MPG++G LL K + + K++PVV+MSS + V CL +GA +FL+KP+
Sbjct: 128 DLILTEVAMPGLSGIGLLYKIMGHKTRKNIPVVMMSSHDSMGLVFKCLSKGAVDFLVKPI 187
Query: 174 RLSDLEKLQPRLLK 187
R ++L+ L + +
Sbjct: 188 RKNELKNLWQHVWR 201
>gi|296089013|emb|CBI38716.3| unnamed protein product [Vitis vinifera]
Length = 593
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 31/181 (17%)
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DDS R+I+ LLR SY+V V G KA E L K E V
Sbjct: 11 DDST--RQIIAALLRKCSYKVAAVSDGLKAWEAL-------------------KGEPQNV 49
Query: 115 NLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+LI+T+ +P ++G+ LL + K +PV++MSS + S V C+ +GA +FL+KPV
Sbjct: 50 DLILTEVELPSISGFALLSLIMEDDICKKIPVIMMSSHDSISMVLKCMLKGAADFLVKPV 109
Query: 174 RLSDLEKLQPRLLK---------SPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRKAL 224
R ++L L + + S N S N+ + N SN+ S + K+K
Sbjct: 110 RKNELRNLWQHVWRRHAPTSGHVSQNLSIAQNKVEVSSENNTASNHSSDYVVSAQKKKEC 169
Query: 225 S 225
S
Sbjct: 170 S 170
>gi|433676515|ref|ZP_20508615.1| two-component system, sensor histidine kinase [Xanthomonas
translucens pv. translucens DSM 18974]
gi|430818377|emb|CCP38918.1| two-component system, sensor histidine kinase [Xanthomonas
translucens pv. translucens DSM 18974]
Length = 641
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 23/125 (18%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD +R +L+ +L+ + ++ CVD + L+ L
Sbjct: 379 ILVADDHAANRMVLQRMLQKAGHRAICVDGAEAVLDAL---------------------A 417
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV--SSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
ES + ++ D MPGM+G D+LK L+V + PVVV+S++ P + C + GA F
Sbjct: 418 ESEFDAVIVDLHMPGMSGLDMLKHLRVMQAGGPRTPVVVLSADVTPESIQRCEQAGAHTF 477
Query: 169 LLKPV 173
L KP+
Sbjct: 478 LAKPL 482
>gi|78047475|ref|YP_363650.1| sensory/regulatory protein RpfC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346724803|ref|YP_004851472.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv.
citrumelo F1]
gi|78035905|emb|CAJ23596.1| sensory/regulatory protein RpfC [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|346649550|gb|AEO42174.1| sensory/regulatory protein RpfC [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 726
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 461 SMRMLVADDHEANRMVLQRLLEKAGHKVACVNGAEQVLDAMA------------------ 502
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E + ++ D MPGM+G D+LK+L+V S + PVVV+S++ P + C + G
Sbjct: 503 ---EEDFDAVIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAG 559
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV + L
Sbjct: 560 ARAFLAKPVVAAKL 573
>gi|373458202|ref|ZP_09549969.1| integral membrane sensor hybrid histidine kinase [Caldithrix abyssi
DSM 13497]
gi|371719866|gb|EHO41637.1| integral membrane sensor hybrid histidine kinase [Caldithrix abyssi
DSM 13497]
Length = 748
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 24/156 (15%)
Query: 29 GQLEDIPQQEKQPQ---QQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKAL 85
QL + +E P Q+ + +VL +DD+ I+R + +L + QVT +S KAL
Sbjct: 459 AQLHEAEHRETTPYRILQKNLKGLNVLLIDDNPINRSYFQKILEKNKLQVTTAESAFKAL 518
Query: 86 EYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVP 144
E L K R +LI+TD MP M G++L +++ + ++K VP
Sbjct: 519 EIL--------------------KTNQRFDLIITDAQMPEMDGFELSTQIRALKNYKKVP 558
Query: 145 VVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEK 180
+++++S + C + G +L KPV+L+D K
Sbjct: 559 IILLTSSGMRGDSERCKQIGINAYLPKPVKLTDFLK 594
Score = 44.7 bits (104), Expect = 0.035, Method: Composition-based stats.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 31/157 (19%)
Query: 34 IPQQEK-QPQQQQQET-------FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKAL 85
+PQ+E+ QP Q T H+L +D+ +++K+ LL + Y +G + L
Sbjct: 602 LPQEEEVQPSLVTQYTVREVLPRLHILVAEDNPVNQKLAIRLLEKNGYYADIAKNGLEVL 661
Query: 86 EYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKV--SSWKDV 143
E K +++ +LI+ D MP M G ++++ + +
Sbjct: 662 E---------------------KLKKNHYDLILMDVQMPEMDGLQATQKIRELENGKSHI 700
Query: 144 PVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEK 180
P++ +++ + + MCL + ++ KP+R +L K
Sbjct: 701 PIIALTAHAMKKDIDMCLNAAMDGYVSKPIRKEELFK 737
>gi|357138369|ref|XP_003570765.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 615
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 21/148 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD K+LE+LL Y VT AL L ++
Sbjct: 23 VLAVDDDPTCLKVLESLLLRCDYHVTTTGQAATALRML-------------------REN 63
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ R +L+++D MP M G+ LL+ + + D+PV+++S+ V + GA ++LL
Sbjct: 64 KDRFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSANGETQTVMKGITHGACDYLL 121
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNED 198
KPVRL L+ + +++ ++ GN+ D
Sbjct: 122 KPVRLEQLKTIWQHVVRRNTKTRGNDND 149
>gi|113474513|ref|YP_720574.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110165561|gb|ABG50101.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1130
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 21/126 (16%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FH+L VDD I+ ++L N L+ ++YQVT SG +AL LENN N
Sbjct: 719 FHILVVDDEPINIQVLNNYLKANNYQVTQALSGKEALA------ALENNHN--------- 763
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+LI+ D MP MTGY++ +++ + +PV++++++N + + M + GA +
Sbjct: 764 -----FDLILLDIMMPNMTGYEVCSQIREKYPAQSLPVLMLTAKNQIADLVMGFQFGAND 818
Query: 168 FLLKPV 173
+L KP
Sbjct: 819 YLTKPF 824
>gi|338737964|ref|YP_004674926.1| response regulator (CheY-like); diguanylate cyclase (GGDEF) and
response regulator receiver domains [Hyphomicrobium sp.
MC1]
gi|337758527|emb|CCB64352.1| response regulator (CheY-like); diguanylate cyclase (GGDEF) and
response regulator receiver domains [Hyphomicrobium sp.
MC1]
Length = 456
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 22/127 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T VL VDD L + K+LE L+ ++V +SG +AL+ L
Sbjct: 2 TARVLVVDDILANVKLLEARLQAEYFEVLTANSGQQALDIL------------------- 42
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAE 166
E V++++ D MPGM G++ +R+K S +PVV++++ + PS + LE GA+
Sbjct: 43 --EHESVDVVLLDVMMPGMDGFETCRRIKGSHLTHHIPVVMVTALDQPSDKVLGLESGAD 100
Query: 167 EFLLKPV 173
+FL KPV
Sbjct: 101 DFLTKPV 107
>gi|325922143|ref|ZP_08183933.1| Signal transduction histidine kinase [Xanthomonas gardneri ATCC
19865]
gi|325547378|gb|EGD18442.1| Signal transduction histidine kinase [Xanthomonas gardneri ATCC
19865]
Length = 724
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 459 SMRMLVADDHEANRMVLQRLLEKAGHKVRCVNGAEQVLDAMA------------------ 500
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E + ++ D MPGM+G D+LK+L+V S + PVVV+S++ P + C + G
Sbjct: 501 ---EEDFDAVIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPDAIRTCEQAG 557
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV + L
Sbjct: 558 ARAFLAKPVVAAKL 571
>gi|319786383|ref|YP_004145858.1| multi-sensor hybrid histidine kinase [Pseudoxanthomonas suwonensis
11-1]
gi|317464895|gb|ADV26627.1| multi-sensor hybrid histidine kinase [Pseudoxanthomonas suwonensis
11-1]
Length = 791
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/149 (28%), Positives = 74/149 (49%), Gaps = 24/149 (16%)
Query: 34 IPQQEKQPQQQ-QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID 92
+P QE Q Q++ +L +D I+R ++ L+ Y V G++AL L
Sbjct: 529 LPTQEAPAALQVQRQAARILVAEDHPINRAVISRQLQRLGYPHEIVCDGEEALRALA--- 585
Query: 93 NLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK--VSSWKDVPVVVMSS 150
+R +L++TD MPG+ GY+L +R++ +P++ +S+
Sbjct: 586 ------------------TTRYDLLVTDCHMPGLDGYELARRIRGREDGGGRLPIIALSA 627
Query: 151 ENVPSRVTMCLEEGAEEFLLKPVRLSDLE 179
+P V+ C+E G ++FL KPV+L +LE
Sbjct: 628 SVLPGHVSRCIEAGMDDFLAKPVQLHELE 656
>gi|346306035|gb|AEO22193.1| RpfC [Xanthomonas campestris pv. pelargonii]
Length = 724
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 459 SMRMLVADDHEANRMVLQRLLEKAGHKVRCVNGAEQVLDAMA------------------ 500
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E + ++ D MPGM+G D+LK+L+V S + PVVV+S++ P + C + G
Sbjct: 501 ---EKDFDAVIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPDAIRTCEQAG 557
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV + L
Sbjct: 558 ARAFLAKPVVAAKL 571
>gi|356520225|ref|XP_003528764.1| PREDICTED: two-component response regulator-like PRR95-like isoform
1 [Glycine max]
Length = 703
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 33/194 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+ R+I+ LLR SY V V G KA E L KK+
Sbjct: 31 VLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETL-------------------KKK 71
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++LI+T+ +P ++G+ LL ++ K++PV++MSS + S C+ +GA +FL
Sbjct: 72 APELDLILTEVELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFL 131
Query: 170 LKPVRLSDLEKLQPRLLK-------------SPNRSCGNNEDSDNDNKNETSNYKSSTNS 216
+KP+R ++L L + + SP + +ED+ NK+ S S N+
Sbjct: 132 IKPIRKNELRNLWQHVWRRHAISTPTQNTTFSPKKLKTASEDNSASNKSSGSVASSKKNN 191
Query: 217 AFSKRKALSAEAPE 230
S+R + + + P+
Sbjct: 192 ECSERLSEAQDVPQ 205
>gi|56784051|dbj|BAD82798.1| putative response regulator 11 [Oryza sativa Japonica Group]
Length = 586
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 70/133 (52%), Gaps = 21/133 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
VL VDD KILE +LR SY+VT AL+ L +
Sbjct: 10 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDIL-------------------R 50
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ +++ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++
Sbjct: 51 ERKNKFDIVISDVNMPDMDGFKLLEHIGLE--MDLPVIMMSIDGETSRVMKGVQHGACDY 108
Query: 169 LLKPVRLSDLEKL 181
LLKPVR+ +L +
Sbjct: 109 LLKPVRMKELRNI 121
>gi|319657108|gb|ADV58932.1| pseudo-response regulator 7-like protein [Beta vulgaris subsp.
vulgaris]
Length = 718
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 100/207 (48%), Gaps = 50/207 (24%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL V++ R ++ LLR Y+V +G L+ +++++EN
Sbjct: 83 SVRVLLVENDDSTRHVVAALLRNCCYEVVEASNG---LQAWKILEDIEN----------- 128
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
R++L++T+ MP ++G LL K + S K+VPVV+MSS + V CL +GA
Sbjct: 129 -----RIDLVLTEVVMPCVSGIALLFKIMSHKSRKNVPVVMMSSHDSMGLVFKCLSKGAV 183
Query: 167 EFLLKPVRLSDLEKLQPRL---------------------LKSPNRS-CGNNEDSDNDNK 204
+FL+KP+R ++L+ L L +KS N + GNN S+++
Sbjct: 184 DFLVKPIRKNELKNLWQHLWRRCHSSCGSGSESGTQTQKSVKSKNAAKSGNNSGSNDEEY 243
Query: 205 N--------ETSNYKSSTNSAFSKRKA 223
N + S++ S T S++ K+ A
Sbjct: 244 NGSPALNLEDGSDHGSGTQSSWRKQAA 270
>gi|84570629|dbj|BAE72699.1| pseudo-response regulator 95 homologue [Lemna paucicostata]
Length = 448
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 88/169 (52%), Gaps = 26/169 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS RKI+ LLR SY+V+ G +A + L K+
Sbjct: 35 LVEADDST--RKIVAALLRKCSYKVSSASDGLEAWKTL-------------------KES 73
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRL-KVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ ++L++T+ +P ++GY LL + + S K +PV++MSS + V C+ +GA +FL
Sbjct: 74 PNNIDLVLTEVELPNVSGYALLSMMMEHDSCKSIPVIMMSSRDSMKMVFECMLKGAADFL 133
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNET-SNYKSSTNSA 217
+KP+R ++L L + + R N ++ +NET S Y S++N +
Sbjct: 134 VKPIRKNELRNLWQHVWR---RQSANGAENTPPVENETNSEYNSASNHS 179
>gi|357449081|ref|XP_003594816.1| Two-component response regulator ARR2 [Medicago truncatula]
gi|355483864|gb|AES65067.1| Two-component response regulator ARR2 [Medicago truncatula]
Length = 606
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 28/179 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + AL L ++
Sbjct: 35 VLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLL-------------------REN 75
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS+++ + V + GA ++L+
Sbjct: 76 KNGFDIVLSDVHMPDMDGFKLLEHIGLE--MDLPVIMMSADDGKNVVMKGVTHGACDYLI 133
Query: 171 KPVRLSDLEKLQPRLLKSPN------RSCGNNEDSDNDNKNET-SNYKSSTNSAFSKRK 222
KPVR+ L+ + +++ R G ++ D + K T +NY SSTN S +K
Sbjct: 134 KPVRIEALKNIWQHVVRKRKNSWKDLRQSGGLDERDREKKASTDANYSSSTNEGKSSKK 192
>gi|379025904|dbj|BAL63729.1| pseudo-response regulator [Triticum turanicum]
gi|379025906|dbj|BAL63730.1| pseudo-response regulator [Triticum turanicum]
gi|379025908|dbj|BAL63731.1| pseudo-response regulator [Triticum polonicum]
Length = 665
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 72/145 (49%), Gaps = 21/145 (14%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQ ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQGLPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV+ MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVISMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPVRLSDLEKLQPRLLK 187
GA +FL KP+R ++L+ L + +
Sbjct: 132 NGAADFLAKPIRKNELKNLWAHVWR 156
>gi|388493620|gb|AFK34876.1| unknown [Medicago truncatula]
Length = 606
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 88/179 (49%), Gaps = 28/179 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + AL L ++
Sbjct: 35 VLVVDDDPTCLMILERMLRFCLYEVTKCKRAEVALSLL-------------------REN 75
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS+++ + V + GA ++L+
Sbjct: 76 KNGFDIVLSDVHMPDMDGFKLLEHIGLE--MDLPVIMMSADDGKNVVMKGVTHGACDYLI 133
Query: 171 KPVRLSDLEKLQPRLLKSPN------RSCGNNEDSDNDNKNET-SNYKSSTNSAFSKRK 222
KPVR+ L+ + +++ R G ++ D + K T +NY SSTN S +K
Sbjct: 134 KPVRIEALKNIWQHVVRKRKNSWKDLRQSGGLDERDREKKASTDANYSSSTNEGKSSKK 192
>gi|242036083|ref|XP_002465436.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
gi|241919290|gb|EER92434.1| hypothetical protein SORBIDRAFT_01g038820 [Sorghum bicolor]
Length = 765
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 26/164 (15%)
Query: 31 LEDIPQQEKQPQQQQQETF------HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKA 84
++ + +QE+Q Q E F V+ V++ R+++ LLR Y+V ++G A
Sbjct: 56 MQQVDEQEQQGQSIHWERFLPVKTLRVMLVENDDSTRQVVSALLRKCCYEVIPAENGSHA 115
Query: 85 LEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDV 143
YL ++L+NN ++L++T+ MP ++G LL ++ KD+
Sbjct: 116 WRYL---EDLQNN----------------IDLVLTEVFMPCLSGIGLLSKITSHKICKDI 156
Query: 144 PVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
PV++MSS + S V CL +GA +FL+KP+R ++L+ L + +
Sbjct: 157 PVIMMSSNDSMSMVFKCLSKGAVDFLVKPLRKNELKNLWQHVWR 200
>gi|118790785|tpd|FAA00259.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|222619710|gb|EEE55842.1| hypothetical protein OsJ_04457 [Oryza sativa Japonica Group]
Length = 582
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 21/139 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
VL VDD KILE +LR SY+VT AL+ L +
Sbjct: 10 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDIL-------------------R 50
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ +++ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++
Sbjct: 51 ERKNKFDIVISDVNMPDMDGFKLLEHIGLE--MDLPVIMMSIDGETSRVMKGVQHGACDY 108
Query: 169 LLKPVRLSDLEKLQPRLLK 187
LLKPVR+ +L + + +
Sbjct: 109 LLKPVRMKELRNIWQHVYR 127
>gi|156743120|ref|YP_001433249.1| GAF and PAS/PAC sensor-containing adenylate/guanylate cyclase
[Roseiflexus castenholzii DSM 13941]
gi|156234448|gb|ABU59231.1| adenylate/guanylate cyclase with GAF and PAS/PAC sensors
[Roseiflexus castenholzii DSM 13941]
Length = 971
Score = 67.0 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 40/133 (30%), Positives = 74/133 (55%), Gaps = 22/133 (16%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
E H+LAVDD R++L+ LL + Y+V+ +G++AL YL L+ +P
Sbjct: 3 ELAHILAVDDDASVRRMLQILLTNAGYRVSVASTGEEALAYLELV---------TP---- 49
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKD-VPVVVMSSENVPSRVTMCLEEGA 165
+L++ D +PG++G +++R+K + +PV++++ P L+ GA
Sbjct: 50 --------DLVLMDVSLPGLSGQHVMERVKSDPDRPFIPVILITGYGDPEAKVAALDAGA 101
Query: 166 EEFLLKPVRLSDL 178
++FL+KPV L++L
Sbjct: 102 DDFLVKPVDLTEL 114
>gi|125538347|gb|EAY84742.1| hypothetical protein OsI_06112 [Oryza sativa Indica Group]
Length = 626
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD KILENLL Y VT AL+ L ++
Sbjct: 31 VLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLL-------------------REN 71
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ + +L+++D MP M G+ LL+ + + D+PV+++S+ V + GA ++LL
Sbjct: 72 KDQFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSANGETQTVMKGITHGACDYLL 129
Query: 171 KPVRLSDLEKLQPRLLKSPN---RSCGNNEDS 199
KPVRL L + +++ N ++ GN++D+
Sbjct: 130 KPVRLEQLRTIWQHVIRRKNCDAKNRGNDDDA 161
>gi|115444635|ref|NP_001046097.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|49388028|dbj|BAD25144.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113535628|dbj|BAF08011.1| Os02g0182100 [Oryza sativa Japonica Group]
gi|118790764|tpd|FAA00257.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215713506|dbj|BAG94643.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222622313|gb|EEE56445.1| hypothetical protein OsJ_05635 [Oryza sativa Japonica Group]
Length = 626
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 76/152 (50%), Gaps = 24/152 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD KILENLL Y VT AL+ L ++
Sbjct: 31 VLAVDDDPTCLKILENLLLRCQYHVTTTGQAATALKLL-------------------REN 71
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ + +L+++D MP M G+ LL+ + + D+PV+++S+ V + GA ++LL
Sbjct: 72 KDQFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSANGETQTVMKGITHGACDYLL 129
Query: 171 KPVRLSDLEKLQPRLLKSPN---RSCGNNEDS 199
KPVRL L + +++ N ++ GN++D+
Sbjct: 130 KPVRLEQLRTIWQHVIRRKNCDAKNRGNDDDA 161
>gi|328951840|ref|YP_004369174.1| adenylate/guanylate cyclase [Desulfobacca acetoxidans DSM 11109]
gi|328452164|gb|AEB07993.1| adenylate/guanylate cyclase [Desulfobacca acetoxidans DSM 11109]
Length = 357
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 30/154 (19%)
Query: 36 QQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLE 95
+Q +PQ + + ++L VDD+ ++R +L L +Q ++G +AL L
Sbjct: 2 KQHAKPQHGPKNSGYILVVDDNRMNRLMLARGLEKQGHQAAFAENGRQALAMLA------ 55
Query: 96 NNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVP 154
E +LI+ D MP M GY +L L + W+D+PV+++S+ +
Sbjct: 56 ---------------EQDFDLILLDIEMPEMNGYQVLDHLAANVRWRDLPVIMISAVDEI 100
Query: 155 SRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
V C+E GAE++L KP P LLK+
Sbjct: 101 DSVVRCIELGAEDYLTKP--------FNPVLLKA 126
>gi|255566892|ref|XP_002524429.1| conserved hypothetical protein [Ricinus communis]
gi|223536313|gb|EEF37964.1| conserved hypothetical protein [Ricinus communis]
Length = 667
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 73/138 (52%), Gaps = 22/138 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR SY+V V G KA E L K +
Sbjct: 48 LVEADDST--RQIIAALLRKCSYKVAAVPDGLKAWEML-------------------KGK 86
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++LI+T+ +P ++GY LL ++ K++PV++MSS++ S V C+ GA ++L
Sbjct: 87 PHNIDLILTEVELPSISGYALLTLIMEHEICKNIPVIMMSSQDSVSTVYKCMMRGAADYL 146
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KP+R ++L L + +
Sbjct: 147 VKPIRKNELRNLWQHVWR 164
>gi|218189558|gb|EEC71985.1| hypothetical protein OsI_04831 [Oryza sativa Indica Group]
Length = 582
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 72/139 (51%), Gaps = 21/139 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
VL VDD KILE +LR SY+VT AL+ L +
Sbjct: 10 LRVLVVDDDPTWLKILEKMLRKCSYEVTTCGLARVALDIL-------------------R 50
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ +++ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++
Sbjct: 51 ERKNKFDIVISDVNMPDMDGFKLLEHIGLE--MDLPVIMMSIDGETSRVMKGVQHGACDY 108
Query: 169 LLKPVRLSDLEKLQPRLLK 187
LLKPVR+ +L + + +
Sbjct: 109 LLKPVRMKELRNIWQHVYR 127
>gi|449455539|ref|XP_004145510.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 688
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 23/184 (12%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P Q VLAVDD ILE LLR Y VT + AL+ L
Sbjct: 10 PVDQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLL------------ 57
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMC 160
++ +++ +++++D MP M G+ LL+ + + D+PV+++S+ P V
Sbjct: 58 -------RENKNKFDVVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSANGDPKLVMKG 108
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSST--NSAF 218
+ GA ++LLKPVR+ +L+ + +++ + +S N ++ ++ N + S N F
Sbjct: 109 ITHGACDYLLKPVRIEELKNIWQHVIRRKKFDPKDRMNSGNQDRPDSENGEESADPNGKF 168
Query: 219 SKRK 222
+K++
Sbjct: 169 NKKR 172
>gi|328868868|gb|EGG17246.1| cAMP-specific phosphodiesterase [Dictyostelium fasciculatum]
Length = 842
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 21/143 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ H+L VDD + RK+L+NLL Y VT V S ++A L
Sbjct: 144 SIHILVVDDDITQRKVLQNLLSKVFYNVTLVSSAEEAWNMLIY----------------- 186
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTM-CLEEGA 165
++ +L++TD MP +TG+DLL+R+ K++PV++MS + + ++ G
Sbjct: 187 --GTTKFDLVLTDVMMPQVTGFDLLQRINEHPEIKNIPVILMSGTALDCKYANDTIKIGG 244
Query: 166 EEFLLKPVRLSDLEKLQPRLLKS 188
++F+ KP+ L+K LL+S
Sbjct: 245 QDFVTKPIAKELLKKKIDILLRS 267
>gi|85716086|ref|ZP_01047062.1| helix-turn-helix, Fis-type protein [Nitrobacter sp. Nb-311A]
gi|85697085|gb|EAQ34967.1| helix-turn-helix, Fis-type protein [Nitrobacter sp. Nb-311A]
Length = 498
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 73/150 (48%), Gaps = 22/150 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T +L VDD + R+++EN++R Y+ V+SGD A+ + T
Sbjct: 2 TATILIVDDDAVQRRLVENMVRRCGYETMVVESGDAAVAAV------------------T 43
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ ++ ++ D MPG+ G +L ++ + ++PV+V ++ V + GA +
Sbjct: 44 ASDGPAIDALVLDLVMPGLDGMGVLAGIREAGL-NIPVIVQTAHGGIDNVVSAMRAGAHD 102
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGNNE 197
F++KPV +E+LQ L + N S NE
Sbjct: 103 FVVKPV---GIERLQVSLRNALNASALKNE 129
>gi|352100957|ref|ZP_08958468.1| multi-sensor hybrid histidine kinase [Halomonas sp. HAL1]
gi|350600878|gb|EHA16935.1| multi-sensor hybrid histidine kinase [Halomonas sp. HAL1]
Length = 910
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 56/221 (25%), Positives = 100/221 (45%), Gaps = 43/221 (19%)
Query: 15 KQQLLENIPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQ 74
KQ LL ++ G L +P QP + +L VDD+ +R++L+N+L +
Sbjct: 621 KQLLLPAFVSYKKPGPLAALPASS-QPVK-------LLIVDDNAPNRELLKNMLEDPALH 672
Query: 75 VTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKR 134
+T ++SG +ALE+ S V++++ D MPGM G +
Sbjct: 673 ITALESGHQALEF---------------------ARTSNVDMVLMDIRMPGMDGVQTTQA 711
Query: 135 LK--VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRS 192
L+ S+W P++ +++ + S L EG ++ L+KP+ + L +L R L +R
Sbjct: 712 LRRLSSTWARCPIIAVTAHVLSSERQKWLAEGLDDVLIKPIDEAQLHQLLHRFLGVTHRL 771
Query: 193 CGNNEDSDNDNKNETSNYKSSTNSAFSKRKALSAEAPERRP 233
G+N S+T+S+ + K+ S P + P
Sbjct: 772 AGSNAAP------------SATSSSKTTIKSFSHTTPAKLP 800
>gi|356519365|ref|XP_003528343.1| PREDICTED: uncharacterized protein LOC100804937 [Glycine max]
Length = 633
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 91/194 (46%), Gaps = 35/194 (18%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KI+E + Y+VT AL L ++
Sbjct: 14 VLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLL-------------------RER 54
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M GY LL+ + + D+PV++MS ++ S V + GA ++L+
Sbjct: 55 KGCFDVVLSDVHMPDMDGYKLLEHVGLE--MDLPVIMMSGDSTTSAVMKGIRHGACDYLI 112
Query: 171 KPVRLSDLEKLQPRLL-KSPNRS-----CGNNEDSD-NDNKNETSNYKSSTNSAFSKRKA 223
KPVR +L + ++ K N S G+ EDSD N N+ + Y S ++A K
Sbjct: 113 KPVREEELRNIWQHVVRKFWNDSKEQDNSGSMEDSDQNKRGNDDAEYTSVADAAVVK--- 169
Query: 224 LSAEAPERRPKMKE 237
AP++R +KE
Sbjct: 170 ----APKKRSSLKE 179
>gi|297735895|emb|CBI18671.3| unnamed protein product [Vitis vinifera]
Length = 655
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 79/154 (51%), Gaps = 22/154 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD +L+ LLR YQVT + AL+ L ++
Sbjct: 26 VLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKML-------------------REN 66
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV+++SS + P V + GA ++LL
Sbjct: 67 KNNFDLVISDVSMPDMDGFKLLELVGLE--MDLPVIMLSSHSDPKLVMRGITHGACDYLL 124
Query: 171 KPVRLSDLEKLQPRLLKSPN-RSCGNNEDSDNDN 203
KPVR+ +L+ + +++ S N+ +D DN
Sbjct: 125 KPVRIEELKNIWQHVIRRKKIDSKDQNKSADQDN 158
>gi|242059591|ref|XP_002458941.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
gi|241930916|gb|EES04061.1| hypothetical protein SORBIDRAFT_03g043080 [Sorghum bicolor]
Length = 579
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +LR SY+VT AL+ L ++
Sbjct: 15 VLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVALQIL-------------------RER 55
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 56 RNKFDIVISDVNMPDMDGFKLLELIGLE--MDLPVIMMSIDGETSRVMKGVQHGACDYLL 113
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L + + +
Sbjct: 114 KPVRMKELRNIWQHVYR 130
>gi|392308986|ref|ZP_10271520.1| two-component response regulator [Pseudoalteromonas citrea NCIMB
1889]
Length = 300
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 23/128 (17%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
Q+T +L VDD ++R +L+N L YQ++ +S ++AL +L
Sbjct: 2 QKTARILIVDDDPLNRVVLDNTLS-EEYQISQCESAEQALTFLA---------------- 44
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWK-DVPVVVMSSENVPSRVTMCLEEG 164
+++V+LI++D MPGM+GYDLL+RLK +PV+++S+ N + L+ G
Sbjct: 45 -----DNKVDLIISDIRMPGMSGYDLLERLKAKQHTYAIPVIIISASNSYNDEAKGLQMG 99
Query: 165 AEEFLLKP 172
A +++ KP
Sbjct: 100 AMDYITKP 107
>gi|384254096|gb|EIE27570.1| CheY-like protein [Coccomyxa subellipsoidea C-169]
Length = 302
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 71/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD + K++E++LR +YQVT +G ALE L +
Sbjct: 56 VLVVDDDPLCLKVVEHMLRRCNYQVTTCPNGKAALEKL-------------------RDR 96
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+L+++D MP M G+ LL+ + + D+PV++MSS + V + GA +FL+
Sbjct: 97 SVHFDLVLSDVYMPDMDGFKLLEHIGLE--LDLPVIMMSSNGETNVVLRGVTHGAVDFLI 154
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L + +++
Sbjct: 155 KPVRVEELRNVWQHVVR 171
>gi|226875187|gb|ACO88941.1| cytokinin A-type response regulator 1 [Vitis vinifera]
Length = 65
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 51/63 (80%), Gaps = 1/63 (1%)
Query: 130 DLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
+LLK++K SS +++ PVV+MSSEN+ +R+ CLEEGAE+F++KPV+LSD+++L+ + +
Sbjct: 1 ELLKKIKESSTFRETPVVIMSSENILTRIDRCLEEGAEDFIVKPVKLSDVKRLKDYMTRE 60
Query: 189 PNR 191
R
Sbjct: 61 RQR 63
>gi|224098126|ref|XP_002311123.1| pseudo response regulator [Populus trichocarpa]
gi|222850943|gb|EEE88490.1| pseudo response regulator [Populus trichocarpa]
Length = 766
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 53/215 (24%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL V++ R ++ LLR Y+VT V +G +A + L + N
Sbjct: 91 SLKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTN-------------- 136
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
++L++T+ MP ++G LL + + + +++PV++MSS + + V CL +GA
Sbjct: 137 -----HIDLVLTEVAMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAV 191
Query: 167 EFLLKPVRLSDLEKLQPRLLK-----------------SPNRSCGNNEDSDND------- 202
+FL+KP+R ++L+ L + + +S G +E SDND
Sbjct: 192 DFLVKPIRKNELKILWQHVWRKCHSASGSGSESAVRTQKSTKSNGADE-SDNDTGSNDDD 250
Query: 203 -------NKNETSNYKSSTNSAFSKRKALSAEAPE 230
N + S+ S T S+++KR A+ E+P+
Sbjct: 251 GIGSVGLNARDGSDNGSGTQSSWTKR-AVEVESPK 284
>gi|119505208|ref|ZP_01627283.1| adenylate cyclase PLUS two component hybrid sensor and regulator
[marine gamma proteobacterium HTCC2080]
gi|119458899|gb|EAW39999.1| adenylate cyclase PLUS two component hybrid sensor and regulator
[marine gamma proteobacterium HTCC2080]
Length = 482
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 70/123 (56%), Gaps = 22/123 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+LAVDD +R+++ LL+ + + V +SG++ALE L+D +
Sbjct: 130 ILAVDDLPENRELVSRLLQKTGHTVISAESGEEALE---LLDTMG--------------- 171
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
V++++ D MPG+ G ++LKRLK + PVV++S + ++ MC+E GA+++L
Sbjct: 172 ---VDVVLLDLVMPGIGGAEVLKRLKEDERLRATPVVMISGQQDMDQIVMCIEAGADDYL 228
Query: 170 LKP 172
LKP
Sbjct: 229 LKP 231
>gi|325916716|ref|ZP_08178973.1| Signal transduction histidine kinase [Xanthomonas vesicatoria ATCC
35937]
gi|325537065|gb|EGD08804.1| Signal transduction histidine kinase [Xanthomonas vesicatoria ATCC
35937]
Length = 726
Score = 66.6 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 461 SMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMA------------------ 502
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E + ++ D MPGM+G D+LK+L+V S + PVVV+S++ P + C + G
Sbjct: 503 ---EEDFDAVIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAG 559
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV + L
Sbjct: 560 ARAFLAKPVVAAKL 573
>gi|113476924|ref|YP_722985.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110167972|gb|ABG52512.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1207
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 77/146 (52%), Gaps = 24/146 (16%)
Query: 36 QQEKQPQQQQQET-FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNL 94
Q P ++E+ F +L VDD ++ +L N L + +YQV ++G KAL+ L
Sbjct: 725 QTSSLPSSSKKESEFQILIVDDEPVNLTLLSNQLSLHNYQVIQANNGQKALDILA----- 779
Query: 95 ENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW--KDVPVVVMSSEN 152
++ +LI+ D MPGMTGY++ ++++ +W +P+++++++N
Sbjct: 780 ---------------QDFLPDLILLDVMMPGMTGYEVTQKVR-ETWLLHQLPIIMLTAKN 823
Query: 153 VPSRVTMCLEEGAEEFLLKPVRLSDL 178
S + M LE GA ++L KP +L
Sbjct: 824 RVSDLVMGLEVGANDYLSKPFHKKEL 849
>gi|449432892|ref|XP_004134232.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449503838|ref|XP_004162202.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 660
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 92/193 (47%), Gaps = 34/193 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR+ Y VT + AL L ++
Sbjct: 26 VLVVDDDPTCLMILEKMLRICRYDVTNCSRAEDALSLL-------------------RQN 66
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS ++ + V + GA ++L+
Sbjct: 67 KNGFDIVLSDVHMPDMDGFKLLEYIGLE--MDLPVIMMSVDDGKNVVMKGVTHGACDYLI 124
Query: 171 KPVRLSDLEKLQPRLL-------KSPNRSCGNNEDSDNDNK-NETSNYKSSTNSAF---S 219
KPVR+ L+ + ++ K ++C +D D K NE ++Y SS N S
Sbjct: 125 KPVRMEALKNIWQHVVRKRKNEWKDLEQTC--VDDVDRQQKTNEDADYSSSANEGSWRNS 182
Query: 220 KRKALSAEAPERR 232
KR+ E PE R
Sbjct: 183 KRRKDDVEDPEER 195
>gi|359472591|ref|XP_002281291.2| PREDICTED: two-component response regulator ARR2-like [Vitis
vinifera]
Length = 643
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 83/174 (47%), Gaps = 28/174 (16%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
VL VDD + KILE +LR Y VT AL L +
Sbjct: 33 LRVLVVDDDVTCLKILEQMLRRCLYHVTTCSQATIALNIL-------------------R 73
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+++ +++++D MP M GY LL+ + + D+PV++MS++ S V + GA ++
Sbjct: 74 EKKGCFDIVLSDVHMPDMDGYKLLEHVGLE--MDLPVIMMSADGRTSAVMRGIRHGACDY 131
Query: 169 LLKPVRLSDLEKLQPRLLKSP------NRSCGNNEDSDNDNK-NETSNYKSSTN 215
L+KP+R +L+ + +++ + G+ ED+D + E + Y SS N
Sbjct: 132 LIKPIREEELKNIWQHVVRKKWNENKEHEHSGSLEDNDRHKRGGEDAEYASSVN 185
>gi|355469070|gb|ACU42265.2| pseudo response regulator 59 [Pisum sativum]
Length = 494
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 20/143 (13%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+ R+I+ LLR +Y+V V G KA E L K
Sbjct: 47 VLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEIL-------------------KGR 87
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+LI+T+ +P ++GY LL ++ + K +PV++MSS++ S V C+ GA ++L
Sbjct: 88 PRNFDLILTEVDLPSVSGYALLSLIMEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYL 147
Query: 170 LKPVRLSDLEKLQPRLLKSPNRS 192
+KP+R+++L L + + ++S
Sbjct: 148 VKPIRINELRNLWQHVWRRQSQS 170
>gi|218191229|gb|EEC73656.1| hypothetical protein OsI_08184 [Oryza sativa Indica Group]
Length = 54
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 40/49 (81%)
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLL 186
S K +PV +MSSENVP+R++ CLEEGAE+FL+KPVR SD+ +L R+L
Sbjct: 5 SKLKKIPVAIMSSENVPTRISRCLEEGAEDFLVKPVRPSDVSRLFSRVL 53
>gi|418054526|ref|ZP_12692582.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans 1NES1]
gi|353212151|gb|EHB77551.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans 1NES1]
Length = 456
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 67/127 (52%), Gaps = 22/127 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T VL VDD L + K+LE L+ ++V +SG +AL+ L
Sbjct: 2 TARVLVVDDILANVKLLEARLQAEYFEVLTANSGQQALDLL------------------- 42
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAE 166
E V++++ D MPGM G++ +R+K S + +PVV++++ + P+ LE GA+
Sbjct: 43 --ERESVDVVLLDVMMPGMDGFETCRRIKASHATHHIPVVMVTALDQPTDKVQGLESGAD 100
Query: 167 EFLLKPV 173
+FL KPV
Sbjct: 101 DFLTKPV 107
>gi|414168677|ref|ZP_11424640.1| hypothetical protein HMPREF9696_02495 [Afipia clevelandensis ATCC
49720]
gi|410887413|gb|EKS35223.1| hypothetical protein HMPREF9696_02495 [Afipia clevelandensis ATCC
49720]
Length = 504
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y VDSGD AL + LID P T
Sbjct: 5 ILIADDDAVQRRLVENMVQRCGYAAVTVDSGDAALAH--LID---------PDT------ 47
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ V+ ++ D MPG+ G +L +++ D+PV+V ++ V + GA +F++
Sbjct: 48 -APVDALVLDLVMPGLDGMGVLAKIR-DLGLDLPVIVQTAHGGIDNVVSAMRAGAHDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNASALKGE 129
>gi|357159597|ref|XP_003578497.1| PREDICTED: two-component response regulator-like PRR95-like
[Brachypodium distachyon]
Length = 626
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 22/134 (16%)
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DDS R ++ LLR Y V G KA E L K++ +
Sbjct: 47 DDST--RHVISALLRKCGYHVAAASDGVKAWEIL-------------------KEKSFNI 85
Query: 115 NLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+L++T+ +P M+G+ LL ++ + K++PV++MSS + S V C+ +GA +FL+KP+
Sbjct: 86 DLVLTEVELPAMSGFLLLSTIMEHEACKNIPVIMMSSNDAVSMVFKCMLKGAADFLVKPI 145
Query: 174 RLSDLEKLQPRLLK 187
R ++L L + +
Sbjct: 146 RKNELRNLWQHVWR 159
>gi|319787299|ref|YP_004146774.1| multi-sensor hybrid histidine kinase [Pseudoxanthomonas suwonensis
11-1]
gi|317465811|gb|ADV27543.1| multi-sensor hybrid histidine kinase [Pseudoxanthomonas suwonensis
11-1]
Length = 736
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL DD +R +L+ LL+ + ++VTCV G++ L+ + + D
Sbjct: 463 SMQVLVADDYEANRMVLQRLLQKAGHKVTCVAGGEEVLDAMAVRD--------------- 507
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
++ + D MPG++G DLL++L+V PVV++S++ P + C + G
Sbjct: 508 ------YDVAVVDLHMPGISGLDLLRQLRVIQAGGGPQTPVVILSADVTPESIQRCEKAG 561
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV S L
Sbjct: 562 AYAFLAKPVAASRL 575
>gi|157399682|gb|ABV53465.1| pseudo-response regulator 9 [Castanea sativa]
Length = 700
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR SY+V V G KA E L K
Sbjct: 43 LVEADDST--RQIIAALLRKCSYKVAAVSDGLKAWETL-------------------KGR 81
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++L++T+ +P ++G+ LL ++ K++PV++MSS + + V C+ +GA +FL
Sbjct: 82 PHNIDLVLTEVELPSISGFALLTLIMEHDVCKNIPVIMMSSNDAITTVLKCMLKGAADFL 141
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KPVR ++L L + +
Sbjct: 142 IKPVRKNELRNLWQHVWR 159
>gi|338971942|ref|ZP_08627321.1| nitrogen regulation protein NR(I) [Bradyrhizobiaceae bacterium
SG-6C]
gi|338234836|gb|EGP09947.1| nitrogen regulation protein NR(I) [Bradyrhizobiaceae bacterium
SG-6C]
Length = 504
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y VDSGD AL + LID P T
Sbjct: 5 ILIADDDAVQRRLVENMVQRCGYAAVTVDSGDAALAH--LID---------PDT------ 47
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ V+ ++ D MPG+ G +L +++ D+PV+V ++ V + GA +F++
Sbjct: 48 -APVDALVLDLVMPGLDGMGVLAKIR-DLGLDLPVIVQTAHGGIDNVVSAMRAGAHDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNASALKGE 129
>gi|359484783|ref|XP_002270833.2| PREDICTED: two-component response regulator ARR12-like [Vitis
vinifera]
Length = 712
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD +L+ LLR YQVT + AL+ L ++
Sbjct: 26 VLAVDDDPTCLMLLDGLLRRCQYQVTTTNQAITALKML-------------------REN 66
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV+++SS + P V + GA ++LL
Sbjct: 67 KNNFDLVISDVSMPDMDGFKLLELVGLE--MDLPVIMLSSHSDPKLVMRGITHGACDYLL 124
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L+ + +++
Sbjct: 125 KPVRIEELKNIWQHVIR 141
>gi|424794122|ref|ZP_18220139.1| Sensory/regulatory protein RpfC [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422796168|gb|EKU24727.1| Sensory/regulatory protein RpfC [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 723
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 72/165 (43%), Gaps = 37/165 (22%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD +R +L+ +L+ + ++ CVD + L+ L
Sbjct: 463 ILVADDHAANRMVLQRMLQKAGHRAICVDGAEAVLDAL---------------------A 501
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV--SSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
ES + ++ D MPGM+G D+LK+L+V + PVVV+S++ P + C + GA F
Sbjct: 502 ESEFDAVIVDLHMPGMSGLDMLKQLRVMQAGGPRTPVVVLSADVTPESIQRCEQAGAHTF 561
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSS 213
L KP+ + NR D D K +N S+
Sbjct: 562 LAKPL--------------AANRLLDTLTDIATDGKLRGANETSA 592
>gi|255928918|gb|ACU42266.1| pseudo response regulator 59 [Pisum sativum]
Length = 469
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 20/143 (13%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+ R+I+ LLR +Y+V V G KA E L K
Sbjct: 22 VLLVEADDCTRQIITALLRKCNYKVAAVADGLKAWEIL-------------------KGR 62
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+LI+T+ +P ++GY LL ++ + K +PV++MSS++ S V C+ GA ++L
Sbjct: 63 PRNFDLILTEVDLPSVSGYALLSLIMEHDTCKTIPVIMMSSQDSVSTVYKCMLRGAADYL 122
Query: 170 LKPVRLSDLEKLQPRLLKSPNRS 192
+KP+R+++L L + + ++S
Sbjct: 123 VKPIRINELRNLWQHVWRRQSQS 145
>gi|302143985|emb|CBI23090.3| unnamed protein product [Vitis vinifera]
Length = 747
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 32/183 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR SY+V V G KA E L K
Sbjct: 44 LVEADDST--RQIIAALLRKCSYKVAAVPDGLKAWEVL-------------------KAR 82
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++LI+T+ +P ++G+ LL ++ K++PV++MSS + V C+ GA +FL
Sbjct: 83 PHNIDLILTEVELPSISGFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFL 142
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD----------NDNKNETSNYKSSTNSAFS 219
+KPVR ++L+ L + + + + N D N TSN+ S +
Sbjct: 143 VKPVRRNELKNLWQHVWRRQSSTVSGNGPQDESVAQQKVEATSENNPTSNHSSDHVACIQ 202
Query: 220 KRK 222
K K
Sbjct: 203 KNK 205
>gi|365887891|ref|ZP_09426704.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. STM 3809]
gi|365336492|emb|CCD99235.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. STM 3809]
Length = 498
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ V++GD +E L N +ASP
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAVVVETGDAVIEKL-------TNPDASP-------- 49
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
V+ I+ D MPG+ G +L +++ + +PV+V ++ V + GA++F++
Sbjct: 50 ---VDAIVLDLVMPGLDGMGVLSKMR-EAGISIPVIVQTAHGGIDNVVSAMRAGAQDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNTSALKGE 129
>gi|413939317|gb|AFW73868.1| putative two-component response regulator family protein [Zea mays]
Length = 676
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 78/162 (48%), Gaps = 23/162 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD + K+LENLLR Y VT + AL L ++
Sbjct: 23 VLAVDDDPVCLKVLENLLRRCQYHVTTTNQAVVALSML-------------------RQN 63
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+L+++D MP M G+ LL+ + + D+PV+++S V + GA ++LL
Sbjct: 64 RDLFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSVNGETKTVMKGITHGACDYLL 121
Query: 171 KPVRLSDLEKLQPRLLKSPNRSC--GNNEDSDNDNKNETSNY 210
KPVRL +L + +++ +C NN+ + N+ +++
Sbjct: 122 KPVRLEELRNIWQHVVRRKFSNCDRANNDGYEECNRPSNADF 163
>gi|359490833|ref|XP_003634174.1| PREDICTED: two-component response regulator-like APRR5-like [Vitis
vinifera]
Length = 688
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 32/183 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR SY+V V G KA E L K
Sbjct: 44 LVEADDST--RQIIAALLRKCSYKVAAVPDGLKAWEVL-------------------KAR 82
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++LI+T+ +P ++G+ LL ++ K++PV++MSS + V C+ GA +FL
Sbjct: 83 PHNIDLILTEVELPSISGFALLTLVMEHEICKNIPVIMMSSHGSINTVYKCMLRGAADFL 142
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD----------NDNKNETSNYKSSTNSAFS 219
+KPVR ++L+ L + + + + N D N TSN+ S +
Sbjct: 143 VKPVRRNELKNLWQHVWRRQSSTVSGNGPQDESVAQQKVEATSENNPTSNHSSDHVACIQ 202
Query: 220 KRK 222
K K
Sbjct: 203 KNK 205
>gi|356562101|ref|XP_003549312.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 667
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 89/179 (49%), Gaps = 30/179 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD +LE LLR Y VT + AL L ++
Sbjct: 22 VLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALNLL-------------------REN 62
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV+++S + P V + GA ++LL
Sbjct: 63 KTMFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSVNDDPKMVMKGITHGACDYLL 120
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNY-KSSTNSAFSKRKALSAEA 228
KPVR+ +L+ + +++ + D+ +N+TS+Y K++++S + A + +
Sbjct: 121 KPVRIEELQNIWQHVIRR--------KKIDSKEQNKTSDYDKTNSDSGNGRGSAATGNS 171
>gi|365881455|ref|ZP_09420765.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. ORS 375]
gi|365290370|emb|CCD93296.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. ORS 375]
Length = 498
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 74/147 (50%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ V++GD +E L N +ASP
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAVVVETGDAVIEKL-------TNPDASP-------- 49
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
V+ I+ D MPG+ G +L +++ + +PV+V ++ V + GA++F++
Sbjct: 50 ---VDAIVLDLVMPGLDGMGVLSKMR-EAGISIPVIVQTAHGGIDNVVSAMRAGAQDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNTSALKGE 129
>gi|224098134|ref|XP_002311124.1| predicted protein [Populus trichocarpa]
gi|222850944|gb|EEE88491.1| predicted protein [Populus trichocarpa]
Length = 711
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 102/215 (47%), Gaps = 53/215 (24%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL V++ R ++ LLR Y+VT V +G +A + L + N
Sbjct: 36 SLKVLLVENDDSTRHVVSALLRNCGYEVTAVSNGLQAWKVLQDLTN-------------- 81
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
++L++T+ MP ++G LL + + + +++PV++MSS + + V CL +GA
Sbjct: 82 -----HIDLVLTEVAMPCLSGIGLLSKIMSHKTCRNIPVIMMSSHDSMNVVFKCLSKGAV 136
Query: 167 EFLLKPVRLSDLEKLQPRLLK-----------------SPNRSCGNNEDSDND------- 202
+FL+KP+R ++L+ L + + +S G +E SDND
Sbjct: 137 DFLVKPIRKNELKILWQHVWRKCHSASGSGSESAVRTQKSTKSNGADE-SDNDTGSNDDD 195
Query: 203 -------NKNETSNYKSSTNSAFSKRKALSAEAPE 230
N + S+ S T S+++KR A+ E+P+
Sbjct: 196 GIGSVGLNARDGSDNGSGTQSSWTKR-AVEVESPK 229
>gi|150397881|ref|YP_001328348.1| two component sigma54 specific Fis family transcriptional regulator
[Sinorhizobium medicae WSM419]
gi|150029396|gb|ABR61513.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Sinorhizobium medicae WSM419]
Length = 549
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P+Q+ T H+L +DD + R++L N++ + D+G LE +
Sbjct: 33 PRQEAFVTAHILVIDDDPVQRRLLTNMIERLGHVAHLADNGRSGLELM------------ 80
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMC 160
+++ +N+I+ D MPGM G+ L+ L D PV+V + + V
Sbjct: 81 -------QRKGGIINVILLDLLMPGMNGHSFLEAL-AERGVDTPVIVQTGQGGIETVVQA 132
Query: 161 LEEGAEEFLLKPV 173
++ GA +FL+KPV
Sbjct: 133 MQAGAFDFLVKPV 145
>gi|325925186|ref|ZP_08186599.1| Signal transduction histidine kinase [Xanthomonas perforans 91-118]
gi|325544440|gb|EGD15810.1| Signal transduction histidine kinase [Xanthomonas perforans 91-118]
Length = 719
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 24/135 (17%)
Query: 42 QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
+ + + +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 448 HRARVRSMRMLVADDHEANRMVLQRLLEKAGHKVACVNGAEQVLDAMA------------ 495
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVT 158
E + ++ D MPGM+G D+LK+L+V S + PVVV+S++ P +
Sbjct: 496 ---------EEDFDAVIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIR 546
Query: 159 MCLEEGAEEFLLKPV 173
C + GA FL KPV
Sbjct: 547 ACEQAGARAFLAKPV 561
>gi|383141484|gb|AFG52083.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 40/45 (88%)
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQ 182
S K++PVVVMSSENVPSR CL+EGAEEF+LKPV++SD+++L+
Sbjct: 3 SKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLR 47
>gi|383141470|gb|AFG52076.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141472|gb|AFG52077.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141476|gb|AFG52079.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141486|gb|AFG52084.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 40/45 (88%)
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQ 182
S K++PVVVMSSENVPSR CL+EGAEEF+LKPV++SD+++L+
Sbjct: 3 SKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLR 47
>gi|356502390|ref|XP_003520002.1| PREDICTED: uncharacterized protein LOC100817125 [Glycine max]
Length = 633
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 93/194 (47%), Gaps = 33/194 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KI+E + Y+VT AL L ++
Sbjct: 16 VLVVDDDATTLKIIEQMSIRCRYRVTTCTEATVALNLL-------------------RER 56
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M GY LL+ + + D+PV++MS ++ S V + GA ++L+
Sbjct: 57 KGCFDVVLSDVHMPDMDGYKLLEHVGLE--MDLPVIMMSGDSTTSAVMKGIRHGACDYLI 114
Query: 171 KPVRLSDLEKLQPRLLK---SPNR---SCGNNEDSD-NDNKNETSNYKSSTNSAFSKRKA 223
KPVR +L + +++ + N+ + G+ EDSD N N+ + Y SS A A
Sbjct: 115 KPVREEELRNIWQHVVRKFWNDNKELDNSGSMEDSDRNKWGNDDAEYTSSVADA-----A 169
Query: 224 LSAEAPERRPKMKE 237
+AP++R +KE
Sbjct: 170 EVVKAPKKRSSLKE 183
>gi|361066661|gb|AEW07642.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141474|gb|AFG52078.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141478|gb|AFG52080.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141482|gb|AFG52082.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141488|gb|AFG52085.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141490|gb|AFG52086.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141492|gb|AFG52087.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141494|gb|AFG52088.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
gi|383141496|gb|AFG52089.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 40/45 (88%)
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQ 182
S K++PVVVMSSENVPSR CL+EGAEEF+LKPV++SD+++L+
Sbjct: 3 SKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLR 47
>gi|312283377|dbj|BAJ34554.1| unnamed protein product [Thellungiella halophila]
Length = 728
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 20/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T VL V++ R I+ LLR SY+V V +G +A + L ++N
Sbjct: 83 TIRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNN-------------- 128
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+++++T+ MP ++G LL K L S +++PV++MSS + V CL +GA
Sbjct: 129 -----HIDIVLTEVVMPYLSGISLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAV 183
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+FL+KP+R ++L+ L + +
Sbjct: 184 DFLVKPIRKNELKILWQHVWR 204
>gi|289577852|ref|YP_003476479.1| response regulator receiver protein [Thermoanaerobacter italicus
Ab9]
gi|289527565|gb|ADD01917.1| response regulator receiver protein [Thermoanaerobacter italicus
Ab9]
Length = 266
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 72/137 (52%), Gaps = 20/137 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDDS + R I++++L V Y V E + A + L K +
Sbjct: 10 ILIVDDSRLIRLIVKDILGVEGYDV-------------------ETAATAEEAILKVKNK 50
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +L++ D +P G++ +++LK + +K++PV+++S + P V +E GA E+L
Sbjct: 51 KELFDLVIVDINLPNQNGFEFIRKLKSQAEYKNIPVMILSGDATPPSVRQAIEVGAVEYL 110
Query: 170 LKPVRLSDLEKLQPRLL 186
+KP + ++L K +L+
Sbjct: 111 IKPFKAAELLKRVVKLI 127
>gi|383141480|gb|AFG52081.1| Pinus taeda anonymous locus 0_7819_01 genomic sequence
Length = 66
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 40/45 (88%)
Query: 138 SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQ 182
S K++PVVVMSSENVPSR CL+EGAEEF+LKPV++SD+++L+
Sbjct: 3 SKLKEIPVVVMSSENVPSRKRRCLDEGAEEFILKPVQISDVKRLR 47
>gi|224121124|ref|XP_002318502.1| pseudo response regulator [Populus trichocarpa]
gi|222859175|gb|EEE96722.1| pseudo response regulator [Populus trichocarpa]
Length = 529
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 22/151 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR SY+V V G KA E L K
Sbjct: 69 LVEADDST--RQIIAALLRKCSYRVVSVPDGLKAWEIL-------------------KGR 107
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++LI+T+ +P ++GY LL ++ K++PV++MSS++ S V C+ GA ++L
Sbjct: 108 PHGIDLILTEVDLPSISGYPLLTIIMEHEICKNIPVIMMSSQDSISTVYKCMLRGAADYL 167
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD 200
+KP+R ++L L + + + G N D
Sbjct: 168 VKPLRKNELRNLWQHVWRRQSSLAGGNGPQD 198
>gi|113474512|ref|YP_720573.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
gi|110165560|gb|ABG50100.1| adenylate/guanylate cyclase [Trichodesmium erythraeum IMS101]
Length = 1133
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 69/126 (54%), Gaps = 21/126 (16%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVL VDD I+ ++L N L+ ++YQVT SG +AL LENN N
Sbjct: 722 FHVLVVDDEPINIQVLNNYLKANNYQVTQALSGKEALA------ALENNHN--------- 766
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+LI+ D MP M+GY++ +++ + +PV++++++N + + M + GA +
Sbjct: 767 -----FDLILLDVMMPNMSGYEVCSQIREKYPAQSLPVLMLTAKNQIADLVMGFQFGAND 821
Query: 168 FLLKPV 173
+L KP
Sbjct: 822 YLTKPF 827
>gi|356520227|ref|XP_003528765.1| PREDICTED: two-component response regulator-like PRR95-like isoform
2 [Glycine max]
Length = 722
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 33/185 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+ R+I+ LLR SY V V G KA E L KK+
Sbjct: 31 VLLVEADHSTRQIIAALLRKCSYTVIAVPDGLKAWETL-------------------KKK 71
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++LI+T+ +P ++G+ LL ++ K++PV++MSS + S C+ +GA +FL
Sbjct: 72 APELDLILTEVELPAISGFALLSLIMEHDICKNIPVIMMSSHDSVSMALKCMLKGAVDFL 131
Query: 170 LKPVRLSDLEKLQPRLLK-------------SPNRSCGNNEDSDNDNKNETSNYKSSTNS 216
+KP+R ++L L + + SP + +ED+ NK+ S S N+
Sbjct: 132 IKPIRKNELRNLWQHVWRRHAISTPTQNTTFSPKKLKTASEDNSASNKSSGSVASSKKNN 191
Query: 217 AFSKR 221
S+R
Sbjct: 192 ECSER 196
>gi|91975887|ref|YP_568546.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris BisB5]
gi|91682343|gb|ABE38645.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris BisB5]
Length = 500
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ DSGD A+ L T +
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAVLADSGDAAIALL------------------TAPD 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ ++ ++ D MPG+ G +L +++ S +VPV+V ++ V + GA +F++
Sbjct: 47 AAAIDAVVLDLVMPGLDGLGVLGKIRESGL-NVPVIVQTAHGGIDNVVSAMRAGAHDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNASALKGE 129
>gi|281308396|gb|ADA58346.1| pseudo-response regulator 7b [Brassica rapa]
Length = 704
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 75/141 (53%), Gaps = 20/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T VL V++ R I+ LLR SY+V V +G +A + L ++N
Sbjct: 73 TIRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNN-------------- 118
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+++++T+ MP ++G LL K L S +++PV++MSS + V CL +GA
Sbjct: 119 -----HIDIVLTEVVMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAV 173
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+FL+KP+R ++L+ L + +
Sbjct: 174 DFLVKPIRKNELKILWQHVWR 194
>gi|15220515|ref|NP_176938.1| two-component response regulator ARR11 [Arabidopsis thaliana]
gi|50400646|sp|Q9FXD6.1|ARR11_ARATH RecName: Full=Two-component response regulator ARR11; AltName:
Full=Receiver-like protein 3
gi|11072012|gb|AAG28891.1|AC008113_7 F12A21.15 [Arabidopsis thaliana]
gi|31711702|gb|AAP68207.1| At1g67710 [Arabidopsis thaliana]
gi|110736401|dbj|BAF00169.1| response regulator 11 [Arabidopsis thaliana]
gi|332196565|gb|AEE34686.1| two-component response regulator ARR11 [Arabidopsis thaliana]
Length = 521
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 28/179 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +L+ SY+VT +AL L ++
Sbjct: 13 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLL-------------------RER 53
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 54 KDGYDIVISDVNMPDMDGFKLLEHVGLE--LDLPVIMMSVDGETSRVMKGVQHGACDYLL 111
Query: 171 KPVRLSDLEKLQPRLLKSPNR------SCGNNEDSDNDNKNETSNY-KSSTNSAFSKRK 222
KP+R+ +L+ + +L+ + CG +D + + +++ + +F K++
Sbjct: 112 KPIRMKELKIIWQHVLRKKLQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKR 170
>gi|109631194|gb|ABG35773.1| SRR391 [Striga asiatica]
Length = 541
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD I K+L+ LLR Y V+ AL+ L ++
Sbjct: 22 VLAVDDDPICLKLLDTLLRKCQYHVSTTSQARMALKML-------------------REN 62
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ R +L+++D MP M G+ LL ++ + D+PV+++S+ + P V + GA ++L+
Sbjct: 63 KDRFDLVISDVHMPDMDGFKLLDQVGLE--MDLPVIMLSANSDPKLVMKGVTHGACDYLV 120
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L + +++
Sbjct: 121 KPVRIEELRNIWQHVIR 137
>gi|307568303|pdb|3M6M|D Chain D, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
gi|307568304|pdb|3M6M|E Chain E, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
gi|307568305|pdb|3M6M|F Chain F, Crystal Structure Of Rpff Complexed With Rec Domain Of
Rpfc
Length = 143
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 24/135 (17%)
Query: 42 QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
+ + + +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 8 HRARVRSMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMA------------ 55
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVT 158
E + ++ D MPGM G D+LK+L+V S + PVVV+S++ P +
Sbjct: 56 ---------EEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIR 106
Query: 159 MCLEEGAEEFLLKPV 173
C + GA FL KPV
Sbjct: 107 ACEQAGARAFLAKPV 121
>gi|7576358|dbj|BAA94549.1| response regulator 11 [Arabidopsis thaliana]
Length = 457
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 88/179 (49%), Gaps = 28/179 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +L+ SY+VT +AL L ++
Sbjct: 13 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLL-------------------RER 53
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 54 KDGYDIVISDVNMPDMDGFKLLEHVGLEL--DLPVIMMSVDGETSRVMKGVQHGACDYLL 111
Query: 171 KPVRLSDLEKLQPRLLKSPNR------SCGNNEDSDNDNKNETSNY-KSSTNSAFSKRK 222
KP+R+ +L+ + +L+ + CG +D + + +++ + +F K++
Sbjct: 112 KPIRMKELKIIWQHVLRKKLQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKR 170
>gi|148258071|ref|YP_001242656.1| two component, sigma54 specific, Fis family transcriptional
regulator [Bradyrhizobium sp. BTAi1]
gi|146410244|gb|ABQ38750.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Bradyrhizobium sp. BTAi1]
Length = 497
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 74/147 (50%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ VD+GD +E L +++A P
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAIVVDTGDAVIEKL-------THTDAGP-------- 49
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ I+ D MPG+ G +L +++ + +PV+V ++ V + GA++F++
Sbjct: 50 ---IDAIVLDLVMPGLDGMGVLSKMR-EAGISIPVIVQTAHGGIDNVVSAMRAGAQDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNTSALKGE 129
>gi|310823306|ref|YP_003955664.1| sensor protein [Stigmatella aurantiaca DW4/3-1]
gi|309396378|gb|ADO73837.1| Sensor protein [Stigmatella aurantiaca DW4/3-1]
Length = 397
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 74/154 (48%), Gaps = 26/154 (16%)
Query: 35 PQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNL 94
P QP +Q VL DD RKI LL S Y++ SG++ L +G
Sbjct: 10 PPSGGQPPSTRQ----VLIADDDAASRKIAAALLAASDYRIRFATSGEETLAAVG----- 60
Query: 95 ENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENV 153
E R +L++ D MPG+ G+++ +RL+ S + +P+++++S +
Sbjct: 61 ----------------EERPDLVLLDVMMPGLDGFEVCRRLRERLSGEYIPIILVTSLDG 104
Query: 154 PSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
S V L+ GA++FL KPV ++L LLK
Sbjct: 105 RSDVVQGLKAGADDFLHKPVHGAELRARVSNLLK 138
>gi|357466055|ref|XP_003603312.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355492360|gb|AES73563.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 645
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 29/187 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD +LE LLR Y VT AL L ++
Sbjct: 14 VLAVDDDPTCLLVLETLLRRCQYHVTTTSQAITALTML-------------------REN 54
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ + +L+++D MP M G+ LL+ + + D+PV+++S+ V + GA ++LL
Sbjct: 55 KDKFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSAYGDTKLVMKGISHGACDYLL 112
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRKALSAEAPE 230
KPVRL +L+ + +++ + SD KN+TS +T+ + S ++ AE +
Sbjct: 113 KPVRLEELKNIWQHVIRK--------KKSDPKEKNKTSKPDKTTSDSGSGLRSAGAENSD 164
Query: 231 RRPKMKE 237
K+ +
Sbjct: 165 ENGKLTK 171
>gi|242064244|ref|XP_002453411.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
gi|241933242|gb|EES06387.1| hypothetical protein SORBIDRAFT_04g005580 [Sorghum bicolor]
Length = 631
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 78/157 (49%), Gaps = 24/157 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD K+LE LL+ Y VT AL+ L +++
Sbjct: 30 VLAVDDDPTCLKLLEKLLQHCQYHVTTTGQAATALKLL-------------------REK 70
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ + +L+++D MP M G+ LL+ + + D+PV+++S+ V + GA ++LL
Sbjct: 71 KDQFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSANGETQTVMKGITHGACDYLL 128
Query: 171 KPVRLSDLEKLQPRLLKSPNRSC-GNNEDSDNDNKNE 206
KPVR+ L + +++ RSC N +DND+ +
Sbjct: 129 KPVRIEQLRTIWQHVVR--RRSCDAKNNGNDNDDSGK 163
>gi|75675185|ref|YP_317606.1| Fis family transcriptional regulator [Nitrobacter winogradskyi
Nb-255]
gi|74420055|gb|ABA04254.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Nitrobacter winogradskyi Nb-255]
Length = 498
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 22/150 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T +L DD + R+++EN++R Y+ V+SGD A+ + T
Sbjct: 2 TATILIADDDAVQRRLVENMVRRCGYETIVVESGDAAVAAM------------------T 43
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ ++ ++ D MPG+ G +L ++ + +PV+V ++ V + GA +
Sbjct: 44 AGDGPVIDAVVLDLVMPGLDGMGVLAEIREAGLS-IPVIVQTAHGGIDNVVSAMRAGAHD 102
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGNNE 197
F++KPV +E+LQ L + N S NE
Sbjct: 103 FVVKPV---GIERLQVSLRNALNASALKNE 129
>gi|281209703|gb|EFA83871.1| cAMP phosphodiesterase [Polysphondylium pallidum PN500]
Length = 665
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 21/135 (15%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P + H+L VDD ++ R +L N+L+ ++ VT V +G++A D L N
Sbjct: 160 PAEYSPSKVHILVVDDDIVQRSLLNNMLKKFNFNVTLVTNGEEAW------DTLLNG--- 210
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTM 159
+ +L++TD MP +TG+DLL+R+ K +PV++MS V +
Sbjct: 211 ----------KVMYDLVLTDVMMPMVTGFDLLQRINEHIEIKHIPVILMSGTAVDYKYAN 260
Query: 160 -CLEEGAEEFLLKPV 173
++ G ++FL KP+
Sbjct: 261 DTIKIGGQDFLTKPI 275
>gi|66768644|ref|YP_243406.1| RpfC protein [Xanthomonas campestris pv. campestris str. 8004]
gi|338817932|sp|P0C0F7.2|RPFC_XANC8 RecName: Full=Sensory/regulatory protein RpfC
gi|7688441|emb|CAB89845.1| fused two-component sensor-regulator protein [Xanthomonas
campestris]
gi|66573976|gb|AAY49386.1| RpfC protein [Xanthomonas campestris pv. campestris str. 8004]
Length = 726
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 461 SMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMA------------------ 502
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E + ++ D MPGM G D+LK+L+V S + PVVV+S++ P + C + G
Sbjct: 503 ---EEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAG 559
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV + L
Sbjct: 560 ARAFLAKPVLAAKL 573
>gi|281308388|gb|ADA58342.1| pseudo-response regulator 7a [Brassica rapa]
Length = 725
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 20/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T VL V++ R I+ LLR SY+V V +G +A + L ++N
Sbjct: 94 TIRVLLVENDDCTRYIVTALLRNCSYEVVEVANGVQAWKVLEDLNN-------------- 139
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+++++T+ MP ++G LL K L S +++PV++MSS + + CL +GA
Sbjct: 140 -----HIDIVLTEVVMPYLSGVGLLCKILNHKSRRNIPVIMMSSHDSMGLIFKCLSKGAV 194
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+FL+KP+R ++L+ L + +
Sbjct: 195 DFLVKPIRKNELKILWQHVWR 215
>gi|384419210|ref|YP_005628570.1| two-component system sensor-response regulator hybrid protein RpfC
[Xanthomonas oryzae pv. oryzicola BLS256]
gi|353462123|gb|AEQ96402.1| two-component system sensor-response regulator hybrid protein RpfC
[Xanthomonas oryzae pv. oryzicola BLS256]
Length = 725
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 460 SMRMLVADDHEANRMVLQRLLEKAGHRVMCVNGAEQVLDAMA------------------ 501
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
+ + ++ D MPGM+G D+LK+L+V S + PVVV+S++ P + C + G
Sbjct: 502 ---DEDFDAVIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAG 558
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV + L
Sbjct: 559 ARRFLAKPVVAAKL 572
>gi|315649065|ref|ZP_07902158.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
gi|315275500|gb|EFU38855.1| integral membrane sensor hybrid histidine kinase [Paenibacillus
vortex V453]
Length = 888
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 52/199 (26%), Positives = 91/199 (45%), Gaps = 38/199 (19%)
Query: 10 IPQQEKQQLLENI--------PQQEREGQLEDIPQQEKQPQQ-------QQQETFHVLAV 54
I QEK Q E I P QE + + +K+ + Q+ F +L V
Sbjct: 501 ITAQEKLQTQELIAAAASSSTPLQETGAAFDKMDVSDKERTETVEVKPYSDQDVFRLLVV 560
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DD ++ K++ LL Y +T V ++AL L E++
Sbjct: 561 DDDPVNLKVIRGLLSGEGYWITVVTQAEEALRLL---------------------EQAEW 599
Query: 115 NLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+LI++D MP M+GY+L +R++ ++P++++++ + P + M GA ++L+KPV
Sbjct: 600 DLIISDVMMPQMSGYELSRRIRQRYMLAELPILLLTARSQPEDIHMGFMSGANDYLIKPV 659
Query: 174 RLSDLEKLQPRLLKSPNRS 192
+L K + R L RS
Sbjct: 660 DHLEL-KTRVRALLELKRS 677
>gi|21231304|ref|NP_637221.1| RpfC protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
gi|338817933|sp|P0C0F6.2|RPFC_XANCP RecName: Full=Sensory/regulatory protein RpfC
gi|21112958|gb|AAM41145.1| RpfC protein [Xanthomonas campestris pv. campestris str. ATCC
33913]
Length = 726
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 461 SMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMA------------------ 502
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E + ++ D MPGM G D+LK+L+V S + PVVV+S++ P + C + G
Sbjct: 503 ---EEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAG 559
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV + L
Sbjct: 560 ARAFLAKPVVAAKL 573
>gi|384427755|ref|YP_005637114.1| two-component system sensor-response regulator hybrid protein RpfC
[Xanthomonas campestris pv. raphani 756C]
gi|341936857|gb|AEL06996.1| two-component system sensor-response regulator hybrid protein RpfC
[Xanthomonas campestris pv. raphani 756C]
Length = 726
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 461 SMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMA------------------ 502
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E + ++ D MPGM G D+LK+L+V S + PVVV+S++ P + C + G
Sbjct: 503 ---EEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAG 559
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV + L
Sbjct: 560 ARAFLAKPVVAAKL 573
>gi|118351764|ref|XP_001009157.1| Protein kinase domain containing protein [Tetrahymena thermophila]
gi|89290924|gb|EAR88912.1| Protein kinase domain containing protein [Tetrahymena thermophila
SB210]
Length = 818
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 73/133 (54%), Gaps = 20/133 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL +D R L ++L + YQVT V++G A + L K
Sbjct: 4 HVLVAEDDNFQRLALIDILTLCDYQVTAVENGRLARDEL-------------------LK 44
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
++S +++++ D MP M G++LL ++ + + +PV++MSS+ +V C+ +GA+++
Sbjct: 45 QDSNIDIVLLDLYMPEMDGFELLSLMQEHENLQKIPVIMMSSDKEEEKVATCIAKGAKDY 104
Query: 169 LLKPVRLSDLEKL 181
+ KP+R+ +++ +
Sbjct: 105 IFKPLRVQNVKAI 117
>gi|421598409|ref|ZP_16041841.1| two-component response regulator, partial [Bradyrhizobium sp.
CCGE-LA001]
gi|404269491|gb|EJZ33739.1| two-component response regulator, partial [Bradyrhizobium sp.
CCGE-LA001]
Length = 414
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ VDSGD A+ L T +
Sbjct: 5 ILIADDDAVARRLVENMVQKCGYETVVVDSGDAAIAAL------------------TAPD 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ ++ D MPG+ G +L +++ + +PV+V ++ V + GA +F++
Sbjct: 47 APAIDGVILDLVMPGLDGMGVLAKIREAGLS-IPVIVQTAHGGIDNVISAMRAGAADFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV LE+LQ L + N S E
Sbjct: 106 KPV---GLERLQVSLRNALNASALKGE 129
>gi|224128053|ref|XP_002320232.1| pseudo response regulator [Populus trichocarpa]
gi|222861005|gb|EEE98547.1| pseudo response regulator [Populus trichocarpa]
Length = 717
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 74/145 (51%), Gaps = 22/145 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR SY+V V G A E L K
Sbjct: 48 LVEADDST--RQIIAALLRKCSYRVAAVPDGLMAWETL-------------------KGG 86
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++LI+T+ +P ++GY LL + + K++PV++MSS++ S V C+ +GA +FL
Sbjct: 87 PHNIDLILTEVELPLISGYALLTLVTEHAVCKNIPVIMMSSQDSISMVLKCMLKGAADFL 146
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCG 194
+KPVR ++L L + + S G
Sbjct: 147 IKPVRKNELRNLWQHVWRRQTLSAG 171
>gi|218197710|gb|EEC80137.1| hypothetical protein OsI_21925 [Oryza sativa Indica Group]
Length = 696
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD + K+LE LLR Y VT + AL+ L ++
Sbjct: 28 VLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLL-------------------REN 68
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+L+++D MP M G+ LL+ + + D+PV+++S V + GA ++LL
Sbjct: 69 RDMFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSVNGETKTVMKGITHGACDYLL 126
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNE 206
KPVR+ +L + +++ R GN E ++ D E
Sbjct: 127 KPVRIEELRNIWQHVVR---RKFGNRERNNLDFSKE 159
>gi|187920903|ref|YP_001889935.1| integral membrane sensor hybrid histidine kinase [Burkholderia
phytofirmans PsJN]
gi|187719341|gb|ACD20564.1| integral membrane sensor hybrid histidine kinase [Burkholderia
phytofirmans PsJN]
Length = 721
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 67/134 (50%), Gaps = 29/134 (21%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD I+R I+ +LL + ++G +ALE K +
Sbjct: 514 VLVVDDVEINRAIVVDLLGRLGFDTVEAENGREALE---------------------KAQ 552
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRV--TMCLEEGAEE 167
R LI+TD MP M G+DL + L+ S ++ DVP+V MS+ PS V M +E GA
Sbjct: 553 RERPALILTDIVMPEMNGFDLTRNLRRSQAFADVPIVAMSAS--PSGVNRAMSIEAGANA 610
Query: 168 FLLKPVRLSDLEKL 181
FL KPV DLE L
Sbjct: 611 FLSKPV---DLEAL 621
>gi|115466774|ref|NP_001056986.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|55771374|dbj|BAD72541.1| putative response regulator 9 [Oryza sativa Japonica Group]
gi|113595026|dbj|BAF18900.1| Os06g0183100 [Oryza sativa Japonica Group]
gi|118790746|tpd|FAA00255.1| TPA: response regulator [Oryza sativa Japonica Group]
gi|215736874|dbj|BAG95803.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635081|gb|EEE65213.1| hypothetical protein OsJ_20357 [Oryza sativa Japonica Group]
Length = 696
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD + K+LE LLR Y VT + AL+ L ++
Sbjct: 28 VLAVDDDPVCLKVLETLLRRCQYHVTSTNQAITALKLL-------------------REN 68
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+L+++D MP M G+ LL+ + + D+PV+++S V + GA ++LL
Sbjct: 69 RDMFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSVNGETKTVMKGITHGACDYLL 126
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNE 206
KPVR+ +L + +++ R GN E ++ D E
Sbjct: 127 KPVRIEELRNIWQHVVR---RKFGNRERNNLDFSKE 159
>gi|325910796|dbj|BAJ83828.1| circadian response regulator 2a [Physcomitrella patens subsp.
patens]
Length = 915
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 74/134 (55%), Gaps = 20/134 (14%)
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
+D R ++ LLR +Y+VT V +G A GL++ E NSN
Sbjct: 189 EDDDATRHVVGALLRNCNYEVTSVANGSLAW---GLLE--EANSN--------------F 229
Query: 115 NLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+L++TD MP ++G +L K LK + K VP+V+MSS + + V CL +GA ++L+KPV
Sbjct: 230 DLVLTDVVMPCLSGVGILSKMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPV 289
Query: 174 RLSDLEKLQPRLLK 187
R ++L+ L + +
Sbjct: 290 RKNELKNLWQHVWR 303
>gi|188991538|ref|YP_001903548.1| Sensory/regulatory protein RpfC [Xanthomonas campestris pv.
campestris str. B100]
gi|167733298|emb|CAP51497.1| Sensory/regulatory protein RpfC [Xanthomonas campestris pv.
campestris]
Length = 726
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 65/134 (48%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 461 SMRMLVADDHEANRMVLQRLLEKAGHKVLCVNGAEQVLDAMA------------------ 502
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
E + ++ D MPGM G D+LK+L+V S + PVVV+S++ P + C + G
Sbjct: 503 ---EEDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAG 559
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV + L
Sbjct: 560 ARAFLAKPVVAAKL 573
>gi|227872712|ref|ZP_03991039.1| conserved hypothetical protein [Oribacterium sinus F0268]
gi|227841437|gb|EEJ51740.1| conserved hypothetical protein [Oribacterium sinus F0268]
Length = 947
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 46/173 (26%), Positives = 86/173 (49%), Gaps = 35/173 (20%)
Query: 22 IPQ----QEREGQLEDIPQQEKQPQQQQQETF-----HVLAVDDSLIDRKILENLLRVSS 72
IPQ ++R G E+ Q+++ ++ + F +L VDD+ ++ ++++NLL+ +
Sbjct: 642 IPQWQLNEDRIGNYEERYQKQRGEKKDFNKGFIAKDARILVVDDNELNLRLVQNLLKRTE 701
Query: 73 YQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLL 132
Q+TC SG++ +E K E ++I D+ MPGM G + L
Sbjct: 702 VQITCAFSGEECIE---------------------KLREENFDIIFLDHMMPGMDGEETL 740
Query: 133 KRLKVSSW-----KDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEK 180
K+++ +++ K VPV+ SS +P + + +L KPV ++LEK
Sbjct: 741 KKIRENAFENRYGKPVPVIAFSSNMLPGIRQKYVNTSFDAYLTKPVDGNELEK 793
>gi|383769464|ref|YP_005448527.1| two-component response regulator [Bradyrhizobium sp. S23321]
gi|381357585|dbj|BAL74415.1| two-component response regulator [Bradyrhizobium sp. S23321]
Length = 498
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ VDSGD A+ L T +
Sbjct: 5 ILIADDDAVARRLVENMVQKCGYETIVVDSGDAAIAAL------------------TAPD 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
V+ ++ D MPG+ G +L +++ + VPV+V ++ V + GA +F++
Sbjct: 47 APAVDGVILDLVMPGLDGMGVLAKIREAGLS-VPVIVQTAHGGIDNVISAMRAGAADFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GMERLQVSLRNALNASALKGE 129
>gi|27382241|ref|NP_773770.1| two-component response regulator [Bradyrhizobium japonicum USDA
110]
gi|27355412|dbj|BAC52395.1| two-component response regulator [Bradyrhizobium japonicum USDA
110]
Length = 499
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ VDSGD A+ L T +
Sbjct: 5 ILIADDDAVARRLIENMVQKCGYETVVVDSGDAAIAAL------------------TAPD 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ ++ D MPG+ G +L +++ + VPV+V ++ V + GA +F++
Sbjct: 47 APAIDGVILDLVMPGLDGMGVLAKIREAGL-SVPVIVQTAHGGIDNVISAMRAGAADFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GMERLQVSLRNALNASALKGE 129
>gi|326390489|ref|ZP_08212046.1| response regulator receiver protein [Thermoanaerobacter ethanolicus
JW 200]
gi|325993457|gb|EGD51892.1| response regulator receiver protein [Thermoanaerobacter ethanolicus
JW 200]
Length = 266
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 70/138 (50%), Gaps = 20/138 (14%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
++L VDDS++ R + +N+L Y V E + A + K
Sbjct: 9 NILVVDDSVLIRLMAKNILEAEGYDV-------------------ETAATAEEAIFKVKN 49
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E +L++ D +P G++ +++LK + +K++PV+++S + P + +E GA E+
Sbjct: 50 REKLFDLVIVDINLPNQNGFEFIQKLKSQAEYKNIPVMILSGDATPVSIKEAVEVGAVEY 109
Query: 169 LLKPVRLSDLEKLQPRLL 186
L+KP + ++L K +L+
Sbjct: 110 LIKPFKAAELVKRVVKLI 127
>gi|23014142|ref|ZP_00053975.1| COG0784: FOG: CheY-like receiver [Magnetospirillum magnetotacticum
MS-1]
Length = 619
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 23/142 (16%)
Query: 34 IPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLL-RVSSYQVTCVDSGDKALEYLGLID 92
IP ++ +P+ E VL VDD+ ++R ++E LL R+ +V V+SG+K L +
Sbjct: 229 IPTRQLRPEPLGLEAVRVLVVDDNKMNRVLMETLLLRMGVGRVEAVESGEKGLAAI---- 284
Query: 93 NLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRL-KVSSWKDVPVVVMSSE 151
E + +L++ D MPGM G+++ +RL ++ ++PV+ +++
Sbjct: 285 -----------------EREKPDLVLLDVMMPGMDGFEMCRRLRRIHPLTELPVIFVTAL 327
Query: 152 NVPSRVTMCLEEGAEEFLLKPV 173
+ P+ T C G + + KP+
Sbjct: 328 DGPADRTACFSAGGSDMVAKPM 349
>gi|414879149|tpg|DAA56280.1| TPA: putative two-component response regulator family protein [Zea
mays]
Length = 584
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +LR SY+VT A++ L ++
Sbjct: 15 VLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQIL-------------------RER 55
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 56 RNKFDIVISDVNMPDMDGFKLLELIGLE--MDLPVIMMSIDGETSRVMKGVQHGACDYLL 113
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L + + +
Sbjct: 114 KPVRMKELRNIWQHVYR 130
>gi|226503033|ref|NP_001152300.1| two-component response regulator ARR11 [Zea mays]
gi|195654849|gb|ACG46892.1| two-component response regulator ARR11 [Zea mays]
Length = 584
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +LR SY+VT A++ L ++
Sbjct: 15 VLVVDDDPTWLKILEKMLRKCSYEVTTCGLASVAIQIL-------------------RER 55
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 56 RNKFDIVISDVNMPDMDGFKLLELIGLE--MDLPVIMMSIDGETSRVMKGVQHGACDYLL 113
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L + + +
Sbjct: 114 KPVRMKELRNIWQHVYR 130
>gi|395497179|ref|ZP_10428758.1| putative sensory box GGDEF/EAL domain-containing protein
[Pseudomonas sp. PAMC 25886]
Length = 422
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 66/124 (53%), Gaps = 22/124 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD + RK+LE LLR YQ SG++AL+ + + P
Sbjct: 8 LLIVDDEIQVRKLLETLLRHEGYQTLSAASGEEALQLV---------ARQPP-------- 50
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+LI+ D MPGM GY++ +LK + ++P++++S+ + PS LE GAEEF+
Sbjct: 51 ----DLILLDIMMPGMDGYEVANQLKQDPTTANIPIIMLSALSEPSARLSGLENGAEEFI 106
Query: 170 LKPV 173
KPV
Sbjct: 107 SKPV 110
>gi|414175408|ref|ZP_11429812.1| hypothetical protein HMPREF9695_03458 [Afipia broomeae ATCC 49717]
gi|410889237|gb|EKS37040.1| hypothetical protein HMPREF9695_03458 [Afipia broomeae ATCC 49717]
Length = 503
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y VDSGD AL + LID P T
Sbjct: 5 ILIADDDAVQRRLVENMVQRCGYDAVTVDSGDAALAH--LID---------PDT------ 47
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
V+ ++ D MPG+ G +L +++ D+PV+V ++ V + GA +F++
Sbjct: 48 -KPVDALVLDLVMPGLDGMGVLAKIR-DIGLDLPVIVQTAHGGIDNVVSAMRAGAHDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNASALKGE 129
>gi|298103728|emb|CBM42565.1| putative B-type response regulator 14 [Populus x canadensis]
Length = 594
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +L+ SY+VT AL L ++
Sbjct: 20 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALNLL-------------------RER 60
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+++ + D+PV++MS + SRV ++ GA ++LL
Sbjct: 61 KGGYDIVISDVYMPDMDGFKLLEQVGLE--MDLPVIMMSVDGETSRVMKGVQHGACDYLL 118
Query: 171 KPVRLSDLEKLQPRLLK 187
KP+R+ +L + + +
Sbjct: 119 KPIRMKELRNIWQHVFR 135
>gi|254283593|ref|ZP_04958561.1| adenylate/guanylate cyclase [gamma proteobacterium NOR51-B]
gi|219679796|gb|EED36145.1| adenylate/guanylate cyclase [gamma proteobacterium NOR51-B]
Length = 479
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 69/135 (51%), Gaps = 22/135 (16%)
Query: 39 KQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNS 98
K P + +LAVDD +R+++ LL S + V +SG++ALE LG +
Sbjct: 115 KPPSADPTDAGVILAVDDMPENRELISRLLHRSGHTVITAESGEEALELLGTM------- 167
Query: 99 NASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRV 157
V++++ D MPG+ G ++L+RLK + PVV++S ++
Sbjct: 168 --------------AVDVVLLDLMMPGIGGAEVLRRLKDDPELRATPVVMISGRQDMQQI 213
Query: 158 TMCLEEGAEEFLLKP 172
C++ GA+++LLKP
Sbjct: 214 IGCIQAGADDYLLKP 228
>gi|21242622|ref|NP_642204.1| RpfC protein [Xanthomonas axonopodis pv. citri str. 306]
gi|21108086|gb|AAM36740.1| RpfC protein [Xanthomonas axonopodis pv. citri str. 306]
Length = 725
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 24/129 (18%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD L +R +L+ LL+ + ++VTCVD G+ L+ L D
Sbjct: 459 SMQILVADDHLANRLVLQRLLQKAGHRVTCVDGGEAVLDALADTD--------------- 503
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
+ + D MPG++G D+LK+L+V VVV+S++ P + C + G
Sbjct: 504 ------YDAAIVDLHMPGVSGLDMLKQLRVMQAGGASVTQVVVLSADVTPESIRSCEQAG 557
Query: 165 AEEFLLKPV 173
A FL KPV
Sbjct: 558 AYAFLAKPV 566
>gi|297841471|ref|XP_002888617.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
gi|297334458|gb|EFH64876.1| hypothetical protein ARALYDRAFT_894522 [Arabidopsis lyrata subsp.
lyrata]
Length = 529
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 28/179 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +L+ SY+VT +AL L ++
Sbjct: 13 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLL-------------------RER 53
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 54 KDGYDIVISDVNMPDMDGFKLLEHVGLE--LDLPVIMMSVDGETSRVMKGVQHGACDYLL 111
Query: 171 KPVRLSDLEKLQPRLLKSPNR------SCGNNEDSDNDNKNETSNY-KSSTNSAFSKRK 222
KP+R+ +L+ + +L+ + CG D + + +++ + +F K++
Sbjct: 112 KPIRMKELKIIWQHVLRKKLQEVRDIEGCGYEGGGDWITRYDEAHFLGGGEDVSFGKKR 170
>gi|168027167|ref|XP_001766102.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
gi|162682745|gb|EDQ69161.1| circadian clock protein PRR2 [Physcomitrella patens subsp. patens]
Length = 1143
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 20/128 (15%)
Query: 61 RKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTD 120
R ++ LLR +Y+VT V +G A GL++ E NSN +L++TD
Sbjct: 195 RHVVGALLRNCNYEVTSVANGSLAW---GLLE--EANSN--------------FDLVLTD 235
Query: 121 YCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLE 179
MP ++G +L K LK + K VP+V+MSS + + V CL +GA ++L+KPVR ++L+
Sbjct: 236 VVMPCLSGVGILSKMLKREACKRVPIVIMSSYDSLNIVFRCLSKGACDYLVKPVRKNELK 295
Query: 180 KLQPRLLK 187
L + +
Sbjct: 296 NLWQHVWR 303
>gi|148266181|ref|YP_001232887.1| CheA signal transduction histidine kinase [Geobacter uraniireducens
Rf4]
gi|146399681|gb|ABQ28314.1| CheA signal transduction histidine kinase [Geobacter uraniireducens
Rf4]
Length = 686
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 65/123 (52%), Gaps = 22/123 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L VDDS+ R + ++L Y+V SG+ ALE K
Sbjct: 568 HILVVDDSITTRTMERSILVTHGYEVEIAISGEDALE---------------------KV 606
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+R +L+++D MPG++G++L +RL+ + ++DVPV+++SS +E GA+ +
Sbjct: 607 AGTRFDLVISDVMMPGISGFELTRRLRTMEDYRDVPVIIVSSLARDEDKRQAMESGAQAY 666
Query: 169 LLK 171
++K
Sbjct: 667 IVK 669
>gi|148656813|ref|YP_001277018.1| putative PAS/PAC sensor protein [Roseiflexus sp. RS-1]
gi|148568923|gb|ABQ91068.1| putative PAS/PAC sensor protein [Roseiflexus sp. RS-1]
Length = 969
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/133 (29%), Positives = 74/133 (55%), Gaps = 22/133 (16%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
E H+L VDD R++L+ LL + Y+V+ +G++AL YL L+ +P
Sbjct: 3 ELAHILVVDDDASVRRMLQILLSNAGYRVSLATTGEEALAYLELV---------TP---- 49
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKD-VPVVVMSSENVPSRVTMCLEEGA 165
+L++ D +PG++G +++R+K + +PV++++ + P L+ GA
Sbjct: 50 --------DLVLLDVALPGVSGRQVMERIKSDPDRPFIPVILVTGHSDPEAKVAALDAGA 101
Query: 166 EEFLLKPVRLSDL 178
++FL+KPV L++L
Sbjct: 102 DDFLVKPVDLAEL 114
>gi|255080498|ref|XP_002503829.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
gi|226519096|gb|ACO65087.1| response regulator receiver/WD40 domain fusion protein [Micromonas
sp. RCC299]
Length = 1414
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 21/125 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD + R ++ +L+ +YQVT SG++A+ L +
Sbjct: 10 HVLLVDDDRVCRTLVAGMLKKCNYQVTTASSGEEAMALL--------------------E 49
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
++ NL++TD MP + G LL ++ + ++++PVV+MSS V C+ GAE++
Sbjct: 50 RGTQFNLLLTDVMMPDVDGPTLLHYVRNNPFYQEMPVVMMSSNEHADTVMNCIRLGAEDY 109
Query: 169 LLKPV 173
LLKPV
Sbjct: 110 LLKPV 114
>gi|384537381|ref|YP_005721466.1| putative sigma-54-dependent transcription regulator protein
[Sinorhizobium meliloti SM11]
gi|336034273|gb|AEH80205.1| putative sigma-54-dependent transcription regulator protein
[Sinorhizobium meliloti SM11]
Length = 554
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 64/133 (48%), Gaps = 20/133 (15%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P+Q+ T H+L +DD + R++L N++ + D+G LE L
Sbjct: 36 PKQEAFVTSHILVIDDDPVQRRLLTNMIERLGHVAHLADNGRSGLELL------------ 83
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMC 160
+++ +N+I+ D MP M G+ LL+ L D+PV+V + + V
Sbjct: 84 -------QRKGGIINVILLDLLMPEMNGHGLLEAL-AERGIDIPVIVQTGQGGIETVVQA 135
Query: 161 LEEGAEEFLLKPV 173
++ GA +FL+KPV
Sbjct: 136 MQAGAFDFLVKPV 148
>gi|255565035|ref|XP_002523510.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223537217|gb|EEF38849.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 676
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 74/137 (54%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD I K+L+ LL+ YQVT + +AL+ L ++
Sbjct: 20 VLAVDDDPICLKVLDTLLKKCQYQVTTTNQAIQALKML-------------------REN 60
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV+++S+ + V + GA ++LL
Sbjct: 61 RNKYDLVISDVNMPDMDGFKLLELVGLE--MDLPVIMLSAHSDKELVYKGVTHGAVDYLL 118
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L+ + +++
Sbjct: 119 KPVRIEELKNIWQHVIR 135
>gi|145340805|ref|XP_001415508.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575731|gb|ABO93800.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 270
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 87/169 (51%), Gaps = 21/169 (12%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD L+ K++E +L+ Y+VT + ALE L T+KE
Sbjct: 7 VLVVDDDLLCLKVVEKMLKACKYKVTACSTAKTALE-----------------ILRTRKE 49
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
E +++++D MP M G+ LL+ ++ +PV++MS+ + S V + GA ++LL
Sbjct: 50 E--FDIVLSDVHMPDMDGFKLLEIIQFE--LALPVLMMSANSDSSVVLRGIIHGAVDYLL 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFS 219
KPVR+ +L + +++ S ++ D + + + K+S +++ S
Sbjct: 106 KPVRIEELRNIWQHVVRRDYSSAKSSGSEDVEASSPSKRAKTSGSNSKS 154
>gi|209515313|ref|ZP_03264180.1| Hpt sensor hybrid histidine kinase [Burkholderia sp. H160]
gi|209504294|gb|EEA04283.1| Hpt sensor hybrid histidine kinase [Burkholderia sp. H160]
Length = 721
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 26/156 (16%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
H+L VDD L +R+++ L Y+ DSG AL
Sbjct: 487 HVIHILVVDDQLANRELIVAQLATLGYEADMADSGGAALR-------------------- 526
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+ E +L+MTD MPGM GY L + L+ S VP++ +++ C + G +
Sbjct: 527 -RFNERHYDLVMTDINMPGMDGYALAQCLRDQS-ATVPIIAITAHVAEEERARCTQAGID 584
Query: 167 EFLLKPVRLSDLEKLQPRLL----KSPNRSCGNNED 198
E LLKPV L ++ RL+ K P S D
Sbjct: 585 EILLKPVLLGTMDATVRRLVNEAGKRPVNSTATRRD 620
>gi|449485185|ref|XP_004157093.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Cucumis sativus]
Length = 688
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 73/147 (49%), Gaps = 21/147 (14%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P Q VLAVDD ILE LLR Y VT + AL+ L
Sbjct: 10 PVDQFPTGMRVLAVDDDPTCLLILETLLRRCQYHVTTTNQAVMALKLL------------ 57
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMC 160
++ +++ +++++D MP M G+ LL+ + + D+PV+++S+ P V
Sbjct: 58 -------RENKNKFDVVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSANGDPKLVMKG 108
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRLLK 187
+ GA ++LLKPVR+ +L+ + +++
Sbjct: 109 ITHGACDYLLKPVRIEELKNIWQHVIR 135
>gi|374095508|sp|Q9LYP5.3|ARR21_ARATH RecName: Full=Putative two-component response regulator ARR21
Length = 613
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 69/131 (52%), Gaps = 22/131 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
V+ VDD + I+ +L+ S Y+V VD KAL STL +++
Sbjct: 18 VMVVDDDHVFLDIMSRMLQHSKYRVIAVDDPKKAL-----------------STLKIQRD 60
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++LI+TDY MPGM G L K++ + ++PV+VMSS+ ++ L GA F+
Sbjct: 61 N--IDLIITDYYMPGMNGLQLKKQI-TQEFGNLPVLVMSSDT--NKEEESLSCGAMGFIP 115
Query: 171 KPVRLSDLEKL 181
KP+ +DL K+
Sbjct: 116 KPIHPTDLTKI 126
>gi|449457923|ref|XP_004146697.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
gi|449505373|ref|XP_004162449.1| PREDICTED: two-component response regulator ARR12-like [Cucumis
sativus]
Length = 697
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD I K+LE+LLR Y VT +AL L ++
Sbjct: 26 VLAVDDDPICLKVLESLLRKCQYHVTTTKQSIEALRML-------------------REN 66
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV+++S+ + V + GA ++LL
Sbjct: 67 RNKFDLVISDVNMPDMDGFKLLELVGLE--MDLPVIMLSAHSDTELVMKGIAHGACDYLL 124
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L+ + +++
Sbjct: 125 KPVRIEELKNIWQHVIR 141
>gi|428320312|ref|YP_007118194.1| Cache sensor hybrid histidine kinase [Oscillatoria nigro-viridis
PCC 7112]
gi|428243992|gb|AFZ09778.1| Cache sensor hybrid histidine kinase [Oscillatoria nigro-viridis
PCC 7112]
Length = 941
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD + ++ NLL ++VT +G + LE K E
Sbjct: 726 VLVVDDKWENLSVIVNLLEPIGFEVTEAKNGQEGLE---------------------KVE 764
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E + +LI+TD MP + G+++++R++ +S +KDV ++ S+ + LE GA +FL
Sbjct: 765 EFKFDLIITDLVMPVLDGFEMMRRIRNLSHYKDVAIIASSASVFATDQHKSLEGGANDFL 824
Query: 170 LKPVRLSDLEKLQPRLLK 187
KPV+ +L ++ + LK
Sbjct: 825 GKPVQAEELFEMLQKYLK 842
>gi|356504197|ref|XP_003520885.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 703
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LL SY+V G KA E L K +
Sbjct: 39 LVEADDST--RQIISALLHKCSYKVVAFCDGLKAWETL-------------------KNK 77
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
S ++LI+T+ +P ++G+ LL ++ K++PV++MSS + S V C+ +GA +FL
Sbjct: 78 PSDIDLILTEVDLPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVLKCMLKGAADFL 137
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KPVR ++L L + +
Sbjct: 138 IKPVRRNELRNLWQHVWR 155
>gi|300022157|ref|YP_003754768.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans ATCC 51888]
gi|299523978|gb|ADJ22447.1| response regulator receiver modulated diguanylate cyclase
[Hyphomicrobium denitrificans ATCC 51888]
Length = 456
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 22/127 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T VL VDD L + K+LE L+ ++V +SG +AL+ L
Sbjct: 2 TARVLVVDDILANVKLLEARLQAEYFEVLTANSGRQALDLL------------------- 42
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAE 166
E V++++ D MPGM G++ + +K S + +PVV++++ + PS LE GA+
Sbjct: 43 --ERESVDVVLLDVMMPGMDGFETCRHIKASHATHHIPVVMVTALDQPSDKVQGLESGAD 100
Query: 167 EFLLKPV 173
+FL KPV
Sbjct: 101 DFLTKPV 107
>gi|427415954|ref|ZP_18906137.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
gi|425758667|gb|EKU99519.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 7375]
Length = 348
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 22/124 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L +DD + I+E L YQ+ SG+ A+ L +
Sbjct: 6 ILVIDDEVSHFDIIEALFNRQDYQLYYAASGEDAIVSL---------------------D 44
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +LI+ D MPG++G ++ +R+K S W++VP++V++ + + VT C+ GA++FL
Sbjct: 45 AFKPDLILLDVLMPGISGIEVCRRIKASPQWQNVPIIVVTILDTRTTVTSCINAGADDFL 104
Query: 170 LKPV 173
KPV
Sbjct: 105 TKPV 108
>gi|379025924|dbj|BAL63739.1| pseudo-response regulator [Triticum turgidum]
Length = 659
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 21/131 (16%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++T VL V+ R+++ LLR YQV ++G +A YL
Sbjct: 31 HRKTIRVLLVETDDSTRQVVTALLRHCMYQVIPAENGHQAWAYL---------------- 74
Query: 105 LSTKKEESRVNLIMTDYCM-PGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLE 162
+ +S ++L++T+ M G++G DLL R + KD+PV++MSS + V CL
Sbjct: 75 ---QDMQSNIDLVLTEVFMHGGLSGIDLLGRIMNHEVCKDIPVIMMSSHDSMGTVLSCLS 131
Query: 163 EGAEEFLLKPV 173
GA +FL KP+
Sbjct: 132 NGAADFLAKPI 142
>gi|58582493|ref|YP_201509.1| RpfC protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84624381|ref|YP_451753.1| rpfC protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
gi|58427087|gb|AAW76124.1| RpfC protein [Xanthomonas oryzae pv. oryzae KACC 10331]
gi|84368321|dbj|BAE69479.1| rpfC protein [Xanthomonas oryzae pv. oryzae MAFF 311018]
Length = 725
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 66/134 (49%), Gaps = 24/134 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 460 SMRMLVADDHEANRMVLQRLLEKAGHRVMCVNGAEQVLDAMA------------------ 501
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEG 164
+ + ++ D MPGM+G D+LK+L+V S + PVVV+S++ P + C + G
Sbjct: 502 ---DEDFDAVIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIRACEQAG 558
Query: 165 AEEFLLKPVRLSDL 178
A FL KPV + L
Sbjct: 559 ARAFLAKPVVAAKL 572
>gi|367474914|ref|ZP_09474404.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. ORS 285]
gi|365272791|emb|CCD86872.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. ORS 285]
Length = 498
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ V++GD +E L N +A P
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAVVVETGDAVIEKL-------TNPDAGP-------- 49
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ I+ D MPG+ G +L +++ + +PV+V ++ V + GA++F++
Sbjct: 50 ---IDAIVLDLVMPGLDGMGVLSKMR-EAGISIPVIVQTAHGGIDNVVSAMRAGAQDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNTSALKGE 129
>gi|452966564|gb|EME71574.1| chemotaxis response regulator protein-glutamate methylesterase
[Magnetospirillum sp. SO-1]
Length = 619
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 77/142 (54%), Gaps = 23/142 (16%)
Query: 34 IPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLL-RVSSYQVTCVDSGDKALEYLGLID 92
IP ++ +P+ E+ VL VDD+L++R ++E LL R+ +V V+SG+K L
Sbjct: 229 IPTRQLRPEPPGLESVRVLVVDDNLMNRVLMETLLLRMGVGRVETVESGEKGL------- 281
Query: 93 NLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSE 151
+ ++ +K +LI+ D MPGM G+++ ++L+ ++PV+ +++
Sbjct: 282 ----------AAIAREKP----DLILLDVMMPGMDGFEMCRQLRRRHPLTELPVIFVTAL 327
Query: 152 NVPSRVTMCLEEGAEEFLLKPV 173
+ P+ T C + G + + KP+
Sbjct: 328 DGPADRTACFQAGGSDMVTKPI 349
>gi|242066838|ref|XP_002454708.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
gi|241934539|gb|EES07684.1| hypothetical protein SORBIDRAFT_04g035980 [Sorghum bicolor]
Length = 675
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 21/143 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD + K+LENLLR Y+VT + AL L ++
Sbjct: 23 VLAVDDDPVCLKVLENLLRRCQYRVTTTNQAVVALRML-------------------RQN 63
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+L+++D MP M G+ LL+ + + D+PV+++S V + GA ++LL
Sbjct: 64 RDLFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSVNGETKTVMKGITHGACDYLL 121
Query: 171 KPVRLSDLEKLQPRLLKSPNRSC 193
KPVRL +L + +++ +C
Sbjct: 122 KPVRLEELRNIWQHVVRRKFSNC 144
>gi|147835104|emb|CAN70187.1| hypothetical protein VITISV_039080 [Vitis vinifera]
Length = 650
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 21/144 (14%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPS 103
Q + VLAVDD+++ KIL LL Y+VT +ALE L EN N
Sbjct: 151 QFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEML-----RENRXN---- 201
Query: 104 TLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEE 163
++++TD MP M G+ LLK + + D+PV++ S + S V +
Sbjct: 202 ----------FDIVITDVKMPDMDGFTLLKIIGLE--MDIPVIMTSVNDDRSTVLKGIRH 249
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA ++LLKPVR+ +++ + +++
Sbjct: 250 GARDYLLKPVRVLEIKNIWQHVVR 273
>gi|403374229|gb|EJY87054.1| Protein kinase domain containing protein [Oxytricha trifallax]
Length = 834
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 71/140 (50%), Gaps = 26/140 (18%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
Q T+++L +D R L ++L + Y+VT V++G KAL +
Sbjct: 4 QRTYNILLAEDEQFQRLALYDILELCDYEVTTVENGKKAL-------------------V 44
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRL----KVSSWKDVPVVVMSSENVPSRVTMCL 161
+ E +L++ D MP M G++LL + K+S +PVVVMS++ + CL
Sbjct: 45 ELRDETREFDLVLLDLYMPEMDGFELLTLMQEDEKLSL---LPVVVMSADGDKDIIANCL 101
Query: 162 EEGAEEFLLKPVRLSDLEKL 181
GA+++L+KPVR + + L
Sbjct: 102 RMGAKDYLVKPVRFQECKGL 121
>gi|395646894|ref|ZP_10434754.1| response regulator receiver sensor signal transduction histidine
kinase [Methanofollis liminatans DSM 4140]
gi|395443634|gb|EJG08391.1| response regulator receiver sensor signal transduction histidine
kinase [Methanofollis liminatans DSM 4140]
Length = 438
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 22/132 (16%)
Query: 42 QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
+ Q + VL V+DS + L +L Y VT G+ AL +G
Sbjct: 3 EMQTRPAISVLVVEDSRTQAEFLRYMLEQEGYDVTLAADGEAALRRIG------------ 50
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCL 161
R +++++D MPGM GYDL +R+K +PV+++++ P+ V L
Sbjct: 51 ---------AGRPDIVLSDILMPGMDGYDLCRRIK-QEHPAIPVILVTTLFDPADVMRGL 100
Query: 162 EEGAEEFLLKPV 173
E GA+ F++KPV
Sbjct: 101 EAGADSFIVKPV 112
>gi|297810367|ref|XP_002873067.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
gi|297318904|gb|EFH49326.1| pseudo-response regulator 7 [Arabidopsis lyrata subsp. lyrata]
Length = 733
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 20/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T VL V++ R I+ LLR SY+V +G +A + L ++N
Sbjct: 84 TIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNN-------------- 129
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+++++T+ MP ++G LL + L S +++PV++MSS + V CL +GA
Sbjct: 130 -----HIDIVLTEVIMPYLSGISLLSKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAV 184
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+FL+KP+R ++L+ L + +
Sbjct: 185 DFLVKPIRKNELKILWQHVWR 205
>gi|18414032|ref|NP_568107.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
gi|52783235|sp|Q93WK5.1|APRR7_ARATH RecName: Full=Two-component response regulator-like APRR7; AltName:
Full=Pseudo-response regulator 7
gi|10281004|dbj|BAB13742.1| pseudo-response regulator 7 [Arabidopsis thaliana]
gi|14532638|gb|AAK64047.1| unknown protein [Arabidopsis thaliana]
gi|23296600|gb|AAN13129.1| unknown protein [Arabidopsis thaliana]
gi|332003137|gb|AED90520.1| two-component response regulator-like APRR7 [Arabidopsis thaliana]
Length = 727
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 74/141 (52%), Gaps = 20/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T VL V++ R I+ LLR SY+V +G +A + L ++N
Sbjct: 77 TIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNN-------------- 122
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+++++T+ MP ++G LL K L S +++PV++MSS + V CL +GA
Sbjct: 123 -----HIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAV 177
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+FL+KP+R ++L+ L + +
Sbjct: 178 DFLVKPIRKNELKILWQHVWR 198
>gi|3549639|emb|CAA06431.1| receiver-like protein 3 [Arabidopsis thaliana]
Length = 444
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 87/179 (48%), Gaps = 28/179 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +L+ SY+VT +AL L ++
Sbjct: 13 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLAREALRLL-------------------RER 53
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS + SRV + GA ++LL
Sbjct: 54 KDGYDIVISDVNMPDMDGFKLLEHVGLEL--DLPVIMMSVDGETSRVMKGVHTGACDYLL 111
Query: 171 KPVRLSDLEKLQPRLLKSPNR------SCGNNEDSDNDNKNETSNY-KSSTNSAFSKRK 222
KP+R+ +L+ + +L+ + CG +D + + +++ + +F K++
Sbjct: 112 KPIRMKELKIIWQHVLRKKLQEVRDIEGCGYEGGADWITRYDEAHFLGGGEDVSFGKKR 170
>gi|92116783|ref|YP_576512.1| two component, sigma54 specific, Fis family transcriptional
regulator [Nitrobacter hamburgensis X14]
gi|91799677|gb|ABE62052.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Nitrobacter hamburgensis X14]
Length = 492
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T +L DD + R+++EN++R Y V+ GD A+ L T
Sbjct: 2 TATILIADDDAVQRRLVENMVRRCGYDAIVVEGGDAAIAAL------------------T 43
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ ++ ++ D MPG+ G +L +++ + VPVVV ++ V + GA +
Sbjct: 44 ASDGPVIDALILDLVMPGLDGMGVLAKIR-EAGISVPVVVQTAHGGIDNVVSAMRAGAHD 102
Query: 168 FLLKPVRLSDLEKLQPRLLKSPNRSCGNNE 197
F++KPV +E+LQ L + N S E
Sbjct: 103 FVIKPV---GIERLQVSLRNALNASALKGE 129
>gi|298103724|emb|CBM42563.1| putative B-type response regulator 21 [Populus x canadensis]
Length = 563
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +L+ SY+VT AL L ++
Sbjct: 19 VLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLL-------------------RER 59
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 60 KGGYDIVISDVFMPDMDGFKLLEHVGLE--MDLPVIMMSVDGETSRVMKGVQHGACDYLL 117
Query: 171 KPVRLSDLEKLQPRLLK 187
KP+R+ +L + + +
Sbjct: 118 KPIRMKELRNIWQHVFR 134
>gi|84570627|dbj|BAE72698.1| pseudo-response regulator 59 homologue [Lemna paucicostata]
Length = 501
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 26/176 (14%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
+ + VL V+ R I+ LLR SY V V G KA + + E N N
Sbjct: 70 RRSLRVLLVEPDDCTRHIVTALLRKCSYHVAAVADGIKAWDIVE-----EKNFN------ 118
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEG 164
++I+++ +P +G +LL ++ + + +PV++MSS++ S V C+++G
Sbjct: 119 --------FDIILSEVEVPSFSGINLLSKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKG 170
Query: 165 AEEFLLKPVRLSDLEKLQPRLLKSPNRSCG---NNEDSDNDNKNETSNYKSSTNSA 217
A +FL+KPVR ++L L + + R C N + DN S S+ N A
Sbjct: 171 AVDFLVKPVRKNELRNLWQHVWR---RHCSIPYANGTENGDNTQSASENMSNNNGA 223
>gi|371775823|ref|ZP_09482145.1| putative two-component system sensor protein [Anaerophaga sp. HS1]
Length = 1446
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 82/170 (48%), Gaps = 18/170 (10%)
Query: 18 LLENIPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTC 77
L++ + E + E I + + +Q+ +L V+D+ +R++ LL +++
Sbjct: 1156 LMDAMGGGEAQDHDEQIKENNYRDYLKQKRPLRLLMVEDNETNRQLTVELLSMANITTDV 1215
Query: 78 VDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK- 136
+G +AL +L NNSN ++I+ D MPGM GY +RLK
Sbjct: 1216 ATNGQEAL-------DLANNSNG----------HCPYDVILMDIHMPGMNGYTATRRLKR 1258
Query: 137 VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLL 186
+ WK+VPVV M++E + CL+ G + KP+ DL ++ R++
Sbjct: 1259 IEGWKEVPVVAMTAEALGDVEAQCLQAGMAGLVGKPIDPDDLFRVIFRVV 1308
>gi|197118407|ref|YP_002138834.1| response receiver histidine kinase [Geobacter bemidjiensis Bem]
gi|197087767|gb|ACH39038.1| response receiver histidine kinase [Geobacter bemidjiensis Bem]
Length = 452
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 64/129 (49%), Gaps = 22/129 (17%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
Q + +L VDDS K+LE LL Y+V +G ALE +
Sbjct: 8 QTAPYLILIVDDSPTQAKLLEQLLAGEGYRVAIARNGSDALEQI---------------- 51
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEE 163
E + +L+++D MP M G++L +R++ + S KD P+V+++ N PS V LE
Sbjct: 52 -----RERQPDLVISDILMPEMDGFELCRRVRGMESIKDTPIVLLTHLNDPSDVLHSLEA 106
Query: 164 GAEEFLLKP 172
GA F+ KP
Sbjct: 107 GANYFVSKP 115
>gi|1360642|emb|CAA66459.1| rpfC [Xanthomonas oryzae]
Length = 676
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 24/135 (17%)
Query: 42 QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
+ + + +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 405 HRARVRSMRMLVADDHEANRMVLQRLLEKAGHRVMCVNGAEQVLDAMA------------ 452
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVT 158
+ + ++ D MPGM+G D+LK+L+V S + PVVV+S++ P +
Sbjct: 453 ---------DEDFDAVIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIR 503
Query: 159 MCLEEGAEEFLLKPV 173
C + GA FL KPV
Sbjct: 504 ACEQAGARAFLAKPV 518
>gi|255547918|ref|XP_002515016.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223546067|gb|EEF47570.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 584
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +L+ SY+VT AL L ++
Sbjct: 19 VLVVDDDPTWLKILEKMLKKCSYEVTTCGLARDALYLL-------------------RER 59
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 60 KDGYDIVISDVNMPDMDGFKLLEHVGLE--MDLPVIMMSVDGETSRVMKGVQHGACDYLL 117
Query: 171 KPVRLSDLEKLQPRLLK 187
KP+R+ +L + + +
Sbjct: 118 KPIRMKELRNIWQHVFR 134
>gi|146338287|ref|YP_001203335.1| response regulator in two-component regulatory system, sigma
54-dependent [Bradyrhizobium sp. ORS 278]
gi|146191093|emb|CAL75098.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. ORS 278]
Length = 498
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ V++GD +E L N +A P
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAVVVETGDAVIEKL-------TNPDAGP-------- 49
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ I+ D MPG+ G +L +++ + +PV+V ++ V + GA++F++
Sbjct: 50 ---IDAIVLDLVMPGLDGMGVLSKMR-EAGISIPVIVQTAHGGIDNVVSAMRAGAQDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNTSALKGE 129
>gi|121296536|gb|ABM53768.1| hybrid two-component regulatory protein [Stenotrophomonas
maltophilia]
Length = 702
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 24/126 (19%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL DD +R +L+ LL+ + ++V CV+ G+ L+ +
Sbjct: 440 VLVADDHQANRLVLQRLLQKAGHKVVCVNGGEAVLDAM---------------------A 478
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
ES ++ + D MPGM+G D+LK L+V PV+V+S++ P + C + GA
Sbjct: 479 ESDYDVAIVDLHMPGMSGLDMLKELRVLQAGGAPRTPVLVLSADVTPESIQQCTQAGAHT 538
Query: 168 FLLKPV 173
F KPV
Sbjct: 539 FFGKPV 544
>gi|354567654|ref|ZP_08986822.1| response regulator receiver protein [Fischerella sp. JSC-11]
gi|353542112|gb|EHC11576.1| response regulator receiver protein [Fischerella sp. JSC-11]
Length = 147
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 16/133 (12%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQ--VTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+L V+DS D ++L+ L+R + Q + SGD+ L+YL + N S
Sbjct: 9 LLVVEDSNEDFRMLQRLMRRMAVQNPIHRCTSGDEVLDYL-----YQEGKNPDGS----- 58
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
SR ++I+ D +PG+ G D+L++LK S+K++P+V+ ++ + P + C ++GA
Sbjct: 59 ---SRPSVILLDLNLPGIDGRDILEQLKQDQSFKEIPIVIFTTSSNPKDIEFCYQKGANG 115
Query: 168 FLLKPVRLSDLEK 180
+L+KP+ + +L+K
Sbjct: 116 YLVKPMDVQELQK 128
>gi|120598037|ref|YP_962611.1| putative CheW protein [Shewanella sp. W3-18-1]
gi|120558130|gb|ABM24057.1| putative CheW protein [Shewanella sp. W3-18-1]
Length = 326
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 11/136 (8%)
Query: 38 EKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENN 97
EK +++ +T +L VDDS RK++EN LR + Y + G ALE L + L +
Sbjct: 185 EKMLAKREAKT--ILIVDDSAFIRKMIENTLRSAGYNIITAKDGGDALEMLMEFETLADQ 242
Query: 98 SNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSR 156
NAS S V+ I+TD MP M G L+KRL+ S +++ +P+V+ SS
Sbjct: 243 DNASISDF--------VSAIITDVEMPRMDGMHLVKRLRESKAYRQMPIVMFSSLMSEDN 294
Query: 157 VTMCLEEGAEEFLLKP 172
+ GA + + KP
Sbjct: 295 RIKAISLGANDTITKP 310
>gi|147775384|emb|CAN78184.1| hypothetical protein VITISV_031283 [Vitis vinifera]
Length = 609
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 69/133 (51%), Gaps = 21/133 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
H++ VDD +I I+ +L+ Y+V V+S AL +TL T+
Sbjct: 21 LHIMVVDDDVICLSIVAGILKTWKYEVVTVNSAQDAL-----------------TTLRTR 63
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ +LI+TD MP M G++ +RL V +PVV+MS+++ S + LE GA +
Sbjct: 64 --SNFFHLIVTDVHMPEMDGFEF-QRL-VHEEFHLPVVMMSADDKESSMLRGLEAGAAFY 119
Query: 169 LLKPVRLSDLEKL 181
++KPV DL+ L
Sbjct: 120 IVKPVNYDDLKNL 132
>gi|296083291|emb|CBI22927.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 28/172 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + + AL L +
Sbjct: 35 VLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLL-------------------RGN 75
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+S +++++D MP M G+ LL+ + + D+PV++MS+++ V + GA ++L+
Sbjct: 76 KSGFDIVISDVHMPDMDGFKLLEHIGLE--MDLPVIMMSADDGKHVVMKGVTHGACDYLI 133
Query: 171 KPVRLSDLEKLQPRLLKSPNRSC------GNNEDSDNDNK-NETSNYKSSTN 215
KPVR+ L+ + +++ G+ ED D K +E +Y SS N
Sbjct: 134 KPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEDGDRQQKPSEDVDYSSSAN 185
>gi|188575996|ref|YP_001912925.1| two component sensor-regulator hybrid protein RpfC [Xanthomonas
oryzae pv. oryzae PXO99A]
gi|188520448|gb|ACD58393.1| two component sensor-regulator hybrid protein RpfC [Xanthomonas
oryzae pv. oryzae PXO99A]
Length = 718
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 24/135 (17%)
Query: 42 QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
+ + + +L DD +R +L+ LL + ++V CV+ ++ L+ +
Sbjct: 447 HRARVRSMRMLVADDHEANRMVLQRLLEKAGHRVMCVNGAEQVLDAMA------------ 494
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKV---SSWKDVPVVVMSSENVPSRVT 158
+ + ++ D MPGM+G D+LK+L+V S + PVVV+S++ P +
Sbjct: 495 ---------DEDFDAVIVDLHMPGMSGLDMLKQLRVMQASGMRYTPVVVLSADVTPEAIR 545
Query: 159 MCLEEGAEEFLLKPV 173
C + GA FL KPV
Sbjct: 546 ACEQAGARAFLAKPV 560
>gi|225446094|ref|XP_002270118.1| PREDICTED: uncharacterized protein LOC100266808 [Vitis vinifera]
Length = 643
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 21/144 (14%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPS 103
Q + VLAVDD+++ KIL LL Y+VT +ALE L EN N
Sbjct: 143 QFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEML-----RENREN---- 193
Query: 104 TLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEE 163
++++TD MP M G+ LLK + + D+PV++ S + S V +
Sbjct: 194 ----------FDIVITDVKMPDMDGFTLLKIIGLE--MDIPVIMTSVNDDRSTVLKGIRH 241
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA ++LLKPVR+ +++ + +++
Sbjct: 242 GARDYLLKPVRVLEIKNIWQHVVR 265
>gi|88603985|ref|YP_504163.1| response regulator receiver domain-containing protein
[Methanospirillum hungatei JF-1]
gi|88189447|gb|ABD42444.1| response regulator receiver domain protein (CheY-like)
[Methanospirillum hungatei JF-1]
Length = 436
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 22/126 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ H+L V+D+ + L +LL +QVT +G +ALE
Sbjct: 8 SLHILIVEDNRTQAEYLRHLLEKRGHQVTVSQNGFEALE--------------------- 46
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+ EE R ++I+TD MP M GY L K +K + D+PV++++ P V LE GA+
Sbjct: 47 RIEEKRPDIILTDVMMPDMDGYTLCKTVKQHEKFHDIPVILVTHLYSPVDVIKGLEAGAD 106
Query: 167 EFLLKP 172
F++KP
Sbjct: 107 NFIIKP 112
>gi|428219861|ref|YP_007083333.1| response regulator receiver sensor signal transduction histidine
kinase [Pseudanabaena sp. PCC 7367]
gi|427992204|gb|AFY71897.1| response regulator receiver sensor signal transduction histidine
kinase [Pseudanabaena sp. PCC 7367]
Length = 355
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 19/124 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD ++E +L Y++ V++G +A+ YL EN P
Sbjct: 2 ILVVDDEPAIFDVIEGMLAREGYELVYVNNGYEAISYL------ENPGKQPP-------- 47
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+LI+ D MP M G + KR+K ++W+ +P++++++ N + C+E GA++F+
Sbjct: 48 ----DLILMDVMMPKMNGLETCKRVKANAAWRHIPIIMLTALNSKEDLAHCIEAGADDFI 103
Query: 170 LKPV 173
KP+
Sbjct: 104 GKPI 107
>gi|356554201|ref|XP_003545437.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR12-like [Glycine max]
Length = 681
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD +LE LLR Y VT + AL+ L ++
Sbjct: 22 VLAVDDDSTCLMVLETLLRRCQYHVTTTKNAITALKLL-------------------REN 62
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV+++S + P V + GA ++LL
Sbjct: 63 KTMFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSVNDDPKMVMKGITHGACDYLL 120
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L+ + +++
Sbjct: 121 KPVRIEELQNIWQHVIR 137
>gi|116624444|ref|YP_826600.1| response regulator receiver protein [Candidatus Solibacter usitatus
Ellin6076]
gi|116227606|gb|ABJ86315.1| response regulator receiver protein [Candidatus Solibacter usitatus
Ellin6076]
Length = 129
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 61/123 (49%), Gaps = 19/123 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDDS RKIL+ +LR + + + E L L+
Sbjct: 5 ILVVDDSAAIRKILQRVLRQTGMAIRAIHEAGDGQEALALL------------------A 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E RV+L++TD MP M G LL LK S+ W + PVV++++E ++V ++ GA ++
Sbjct: 47 EHRVDLVLTDINMPKMDGLQLLASLKASAQWHNTPVVMITTEGGETKVAEAVKLGAAGYV 106
Query: 170 LKP 172
KP
Sbjct: 107 RKP 109
>gi|413954817|gb|AFW87466.1| putative two-component response regulator family protein [Zea mays]
Length = 671
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 19/153 (12%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD + KILE L+ +Y T V AL+ L +K+
Sbjct: 12 VLAVDDDRVCLKILERQLKCCNYNTTVVTDAQTALDML-----------------RERKD 54
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D M M G+ LL+ + + D+PV+++S+ + + ++ GA ++++
Sbjct: 55 GNQFDLVISDVVMTKMDGFKLLELIGLE--MDLPVIMLSANSETQTIMKGIKHGACDYMV 112
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDN 203
KPVRL L + ++K+ NN SD+D+
Sbjct: 113 KPVRLEQLRGIWTHVVKNSKIDPRNNIGSDSDD 145
>gi|374577657|ref|ZP_09650753.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Bradyrhizobium sp. WSM471]
gi|374425978|gb|EHR05511.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Bradyrhizobium sp. WSM471]
Length = 497
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 23/147 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ VDSGD A+ L
Sbjct: 5 ILIADDDAVARRLVENMVQKCGYETIVVDSGDAAIAAL-------------------TAP 45
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ ++ ++ D MPG+ G +L +++ + +PV+V ++ V + GA +F++
Sbjct: 46 DAAIDGVILDLVMPGLDGMGVLAKIREAGLS-IPVIVQTAHGGIDNVISAMRAGAADFVV 104
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV LE+LQ L + N S E
Sbjct: 105 KPV---GLERLQVSLRNALNSSALKGE 128
>gi|449450407|ref|XP_004142954.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
gi|449494494|ref|XP_004159561.1| PREDICTED: two-component response regulator ARR11-like [Cucumis
sativus]
Length = 583
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +L+ SY+VT +AL L ++
Sbjct: 19 VLVVDDDPTWLKILEKMLKKCSYEVTTCCLAREALSLL-------------------RER 59
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 60 KDGYDIVISDVNMPDMDGFKLLEHVGLE--MDLPVIMMSVDGETSRVMKGVQHGACDYLL 117
Query: 171 KPVRLSDLEKLQPRLLK 187
KP+R+ +L + +L+
Sbjct: 118 KPIRMKELRNIWQHVLR 134
>gi|404495358|ref|YP_006719464.1| response receiver [Geobacter metallireducens GS-15]
gi|418065548|ref|ZP_12702920.1| response regulator receiver protein [Geobacter metallireducens
RCH3]
gi|78192977|gb|ABB30744.1| response receiver [Geobacter metallireducens GS-15]
gi|373561933|gb|EHP88155.1| response regulator receiver protein [Geobacter metallireducens
RCH3]
Length = 141
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 71/133 (53%), Gaps = 17/133 (12%)
Query: 42 QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
QQ +T +L D+ R I +NL++ + ++ D+G +ALEY E +
Sbjct: 3 QQGAIKTRLILIEDEPGHTRLITKNLMKSADVEILPFDTGRRALEYF------EGKT--- 53
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMC 160
E+ R +L++ D MPG+ G+++LKRLK + + VPV+V ++ + P + C
Sbjct: 54 -------AEDLRQHLVVLDINMPGIDGFEVLKRLKGNEATAAVPVIVFTTTDHPDEIRRC 106
Query: 161 LEEGAEEFLLKPV 173
EGA +L+KP+
Sbjct: 107 YHEGANLYLVKPM 119
>gi|255568450|ref|XP_002525199.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223535496|gb|EEF37165.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 762
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 76/141 (53%), Gaps = 20/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL V++ R ++ LLR SY+V +G L+ ++++L N
Sbjct: 87 SLKVLLVENDYSTRHVVTALLRNCSYEVIEATNG---LQAWRILEDLTN----------- 132
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+++L++T+ MP ++G LL K + + K+VPV++MSS + V CL +GA
Sbjct: 133 -----QIDLVLTEVVMPCLSGIGLLYKIMSHKTRKNVPVIMMSSHDSMGLVFKCLSKGAV 187
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+FL+KP+R ++L+ L + +
Sbjct: 188 DFLVKPIRKNELKNLWQHVWR 208
>gi|88798394|ref|ZP_01113979.1| putative two-component system sensory histidine kinase. [Reinekea
blandensis MED297]
gi|88778834|gb|EAR10024.1| putative two-component system sensory histidine kinase. [Reinekea sp.
MED297]
Length = 1090
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 66/131 (50%), Gaps = 23/131 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD L + L +L ++V+ D+G AL D L +SN
Sbjct: 966 VLVVDDDLRNTYTLSKILSNEGFRVSIADNGQLAL------DKLSKDSN----------- 1008
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ LI+ D MP M GY+ + R++ + +P++ ++++ +P CL GA+++L
Sbjct: 1009 ---IALILMDIMMPVMDGYETIARIRAQHSETLPIIALTAKAMPEDRQKCLSAGADDYLP 1065
Query: 171 KPVRLSDLEKL 181
KPV DLE+L
Sbjct: 1066 KPV---DLEQL 1073
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 42/66 (63%), Gaps = 4/66 (6%)
Query: 117 IMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRL 175
++ D +P + G ++L+ L+ + +++PV V+S+ + P+R ++ GAEE+L KP+ L
Sbjct: 850 VILDLGLPDIDGCEILQVLQNLQHHRNIPVHVISALDDPAR---AMQLGAEEYLAKPINL 906
Query: 176 SDLEKL 181
L ++
Sbjct: 907 EQLNQV 912
>gi|255548782|ref|XP_002515447.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223545391|gb|EEF46896.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 663
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 82/157 (52%), Gaps = 25/157 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD +LE LR Y VT AL+ L ++
Sbjct: 20 VLAVDDDPTCLLVLETFLRRCQYHVTTTSQAISALKML-------------------REN 60
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+++ +L+++D MP M G+ LL+ + + D+PV+++S+ + P V + GA ++LL
Sbjct: 61 KNKFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSAYSDPKLVMKGITHGACDYLL 118
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDN-DNKNE 206
KPVR+ +L+ + +++ R +N+D +N DN+++
Sbjct: 119 KPVRIEELKNIWQHVIR---RKKVDNKDQNNFDNQDK 152
>gi|392544812|ref|ZP_10291949.1| sensor histidine kinase [Pseudoalteromonas rubra ATCC 29570]
Length = 1387
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 20/130 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FHVL VDD L + L LL+ VT D+G ALE L
Sbjct: 1259 FHVLLVDDDLRNTYALSKLLKEQGLDVTMADNGQLALEKL-------------------- 1298
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
++ + +L++ D MP M G++ ++ ++ + +P++ ++++ + CLE GA ++
Sbjct: 1299 QQSEQFDLVLMDIMMPIMDGFEAMRHIRADISQSLPIIALTAKAMSEDKQRCLEAGASDY 1358
Query: 169 LLKPVRLSDL 178
L KPV ++ L
Sbjct: 1359 LAKPVDINVL 1368
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAE 166
K +++ N ++ D +P M G LL LK + +PV ++S +N + L++GA
Sbjct: 1028 KVRQAQPNAVILDIGLPDMDGMALLDTLKSEPKTRQIPVHIVSGKNKDPK---ALQKGAI 1084
Query: 167 EFLLKPVRLSDLEKLQPRL 185
+FL KPV L +E++ +
Sbjct: 1085 DFLTKPVSLDQMEQVFAKF 1103
>gi|225456769|ref|XP_002274673.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
Length = 570
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +L+ SY+VT AL L ++
Sbjct: 19 VLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNML-------------------RER 59
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 60 KDGFDIVISDVNMPDMDGFKLLEHVGLE--MDLPVIMMSVDGETSRVMKGVQHGACDYLL 117
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L+ + + +
Sbjct: 118 KPVRMKELKNIWQHVFR 134
>gi|258678906|dbj|BAI39993.1| pseudo-response regulator homolog protein [Physcomitrella patens
subsp. patens]
Length = 907
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 20/143 (13%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
+ + +L V+ R ++ LLR Y+VT V +G A GL+++ +N
Sbjct: 180 KRSLRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAW---GLLEDANSN-------- 228
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEG 164
+L++TD MP ++G LL K +K + + VP+V+MSS + V CL +G
Sbjct: 229 --------FDLVLTDVVMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKG 280
Query: 165 AEEFLLKPVRLSDLEKLQPRLLK 187
A ++L+KPVR ++L L + +
Sbjct: 281 ACDYLVKPVRKNELRNLWQHVWR 303
>gi|7413556|emb|CAB86035.1| putative protein [Arabidopsis thaliana]
Length = 720
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 20/135 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T VL V++ R I+ LLR SY+V +G +A + L ++N
Sbjct: 77 TIRVLLVENDDCTRYIVTALLRNCSYEVVEASNGIQAWKVLEDLNN-------------- 122
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+++++T+ MP ++G LL K L S +++PV++MSS + V CL +GA
Sbjct: 123 -----HIDIVLTEVIMPYLSGIGLLCKILNHKSRRNIPVIMMSSHDSMGLVFKCLSKGAV 177
Query: 167 EFLLKPVRLSDLEKL 181
+FL+KP+R ++L+ L
Sbjct: 178 DFLVKPIRKNELKIL 192
>gi|386398077|ref|ZP_10082855.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Bradyrhizobium sp. WSM1253]
gi|385738703|gb|EIG58899.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Bradyrhizobium sp. WSM1253]
Length = 497
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 23/147 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ VDSGD A+ L
Sbjct: 5 ILIADDDAVARRLVENMVQKCGYETIVVDSGDAAIAAL-------------------TAP 45
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ ++ ++ D MPG+ G +L +++ + +PV+V ++ V + GA +F++
Sbjct: 46 DAAIDGVILDLVMPGLDGMGVLAKIREAGLS-IPVIVQTAHGGIDNVISAMRAGAADFVV 104
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV LE+LQ L + N S E
Sbjct: 105 KPV---GLERLQVSLRNALNSSALKGE 128
>gi|209884232|ref|YP_002288089.1| transcriptional regulatory protein ZraR [Oligotropha
carboxidovorans OM5]
gi|337742079|ref|YP_004633807.1| transcriptional regulator ZraR [Oligotropha carboxidovorans OM5]
gi|386031096|ref|YP_005951871.1| transcriptional regulatory protein ZraR [Oligotropha
carboxidovorans OM4]
gi|209872428|gb|ACI92224.1| transcriptional regulatory protein ZraR [Oligotropha
carboxidovorans OM5]
gi|336096162|gb|AEI03988.1| transcriptional regulatory protein ZraR [Oligotropha
carboxidovorans OM4]
gi|336099743|gb|AEI07566.1| transcriptional regulatory protein ZraR [Oligotropha
carboxidovorans OM5]
Length = 499
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/132 (28%), Positives = 65/132 (49%), Gaps = 23/132 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R++L+N+++ Y+ V+SGD A+ L E
Sbjct: 5 ILIADDDAVQRRLLDNMVQRCGYRTIVVESGDAAMTVL-------------------ADE 45
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ ++ D MPG+ G +L R++ +S VPVVV ++ V + GA +F++
Sbjct: 46 TQPIDAVVLDLVMPGLDGLGVLARMRDASLH-VPVVVQTAHGGIDNVVSAMRAGAHDFVV 104
Query: 171 KPVRLSDLEKLQ 182
KPV +E+LQ
Sbjct: 105 KPV---GIERLQ 113
>gi|168065344|ref|XP_001784613.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
gi|162663845|gb|EDQ50588.1| circadian clock protein PRR1 [Physcomitrella patens subsp. patens]
Length = 425
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 20/143 (13%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
+ + +L V+ R ++ LLR Y+VT V +G A GL+++ +N
Sbjct: 9 KRSLRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAW---GLLEDANSN-------- 57
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEG 164
+L++TD MP ++G LL K +K + + VP+V+MSS + V CL +G
Sbjct: 58 --------FDLVLTDVVMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKG 109
Query: 165 AEEFLLKPVRLSDLEKLQPRLLK 187
A ++L+KPVR ++L L + +
Sbjct: 110 ACDYLVKPVRKNELRNLWQHVWR 132
>gi|359477139|ref|XP_002275142.2| PREDICTED: two-component response regulator ARR1-like [Vitis
vinifera]
Length = 681
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 82/172 (47%), Gaps = 28/172 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + + AL L +
Sbjct: 35 VLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLL-------------------RGN 75
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+S +++++D MP M G+ LL+ + + D+PV++MS+++ V + GA ++L+
Sbjct: 76 KSGFDIVISDVHMPDMDGFKLLEHIGLE--MDLPVIMMSADDGKHVVMKGVTHGACDYLI 133
Query: 171 KPVRLSDLEKLQPRLLKSPNR------SCGNNEDSDNDNK-NETSNYKSSTN 215
KPVR+ L+ + +++ G+ ED D K +E +Y SS N
Sbjct: 134 KPVRIEALKNIWQHVVRKRKNEWKDLEQSGSVEDGDRQQKPSEDVDYSSSAN 185
>gi|255582079|ref|XP_002531836.1| sensory transduction histidine kinase, putative [Ricinus communis]
gi|223528532|gb|EEF30556.1| sensory transduction histidine kinase, putative [Ricinus communis]
Length = 807
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 74/138 (53%), Gaps = 20/138 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V++ R ++ LLR SY+V V +G +A + L ++N
Sbjct: 76 VLLVENDDSTRHVVSALLRNCSYEVNAVANGFQAWKILEDMNN----------------- 118
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+L++T+ MP ++G LL +++ + +++PV++MSS + V CL +GA +FL
Sbjct: 119 --HTDLVLTEVVMPILSGIGLLCKIRNHKTLRNIPVIMMSSHDSMGIVFKCLSKGAVDFL 176
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KP+R ++L+ L + +
Sbjct: 177 VKPIRKNELKNLWQHVWR 194
>gi|300869426|ref|ZP_07114011.1| two-component hybrid sensor and regulator [Oscillatoria sp. PCC
6506]
gi|300332556|emb|CBN59209.1| two-component hybrid sensor and regulator [Oscillatoria sp. PCC
6506]
Length = 377
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 22/124 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD + ++E LL YQ+ +G ALEYL D E P
Sbjct: 6 ILIVDDEPDNFDVIETLLSEQDYQLYYAANGHDALEYL---DTFE------P-------- 48
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+LI+ D MPG+ G ++ +++K +S W+ VP++++++ N S + CL GA++F+
Sbjct: 49 ----DLILLDVMMPGIDGIEVCRQIKALSKWQAVPIIMVTALNSKSDLAYCLTAGADDFI 104
Query: 170 LKPV 173
KPV
Sbjct: 105 SKPV 108
>gi|297733626|emb|CBI14873.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +L+ SY+VT AL L ++
Sbjct: 19 VLVVDDDPTWLKILEKMLKKCSYEVTTCCLARDALNML-------------------RER 59
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 60 KDGFDIVISDVNMPDMDGFKLLEHVGLE--MDLPVIMMSVDGETSRVMKGVQHGACDYLL 117
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L+ + + +
Sbjct: 118 KPVRMKELKNIWQHVFR 134
>gi|325910792|dbj|BAJ83826.1| circadian response regulator 1a [Physcomitrella patens subsp.
patens]
Length = 907
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 74/143 (51%), Gaps = 20/143 (13%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
+ + +L V+ R ++ LLR Y+VT V +G A GL+++ +N
Sbjct: 180 KRSLRILLVEYDDATRHVVGALLRNCDYEVTAVANGSIAW---GLLEDANSN-------- 228
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEG 164
+L++TD MP ++G LL K +K + + VP+V+MSS + V CL +G
Sbjct: 229 --------FDLVLTDVVMPRLSGVGLLSKMMKREACRRVPIVIMSSYDSLDIVFRCLSKG 280
Query: 165 AEEFLLKPVRLSDLEKLQPRLLK 187
A ++L+KPVR ++L L + +
Sbjct: 281 ACDYLVKPVRKNELRNLWQHVWR 303
>gi|226226746|ref|YP_002760852.1| two-component hybrid sensor and regulator [Gemmatimonas aurantiaca
T-27]
gi|226089937|dbj|BAH38382.1| two-component hybrid sensor and regulator [Gemmatimonas aurantiaca
T-27]
Length = 862
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 66/126 (52%), Gaps = 20/126 (15%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ H+LAV+DS +IL +LL + ++V +G ALE L ST
Sbjct: 2 SHHILAVEDSPTQAEILRHLLESAGHEVAVASNGTAALELLA----------------ST 45
Query: 108 KKEESRVNLIMTDYCMPG-MTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
++ R +++++D MPG + GY+L +R+K S PVV+++S P + LE GA+
Sbjct: 46 RR---RFDVVVSDIVMPGAVDGYELCRRIKASPHYRTPVVLLTSLADPMDIIKGLECGAD 102
Query: 167 EFLLKP 172
F KP
Sbjct: 103 NFFTKP 108
>gi|384215988|ref|YP_005607154.1| two-component response regulator [Bradyrhizobium japonicum USDA 6]
gi|354954887|dbj|BAL07566.1| two-component response regulator [Bradyrhizobium japonicum USDA 6]
Length = 493
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 69/146 (47%), Gaps = 22/146 (15%)
Query: 52 LAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEE 111
+ DD + R+++EN+++ Y+ VDSGD A+ L T +
Sbjct: 1 MIADDDAVARRLVENMVQKCGYETVVVDSGDAAIAAL------------------TAPDA 42
Query: 112 SRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLK 171
++ ++ D MPG+ G +L +++ + VP++V ++ V + GA +F++K
Sbjct: 43 PAIDAVILDLVMPGLDGMGVLAKIREAGL-GVPIIVQTAHGGIDNVISAMRAGAADFVVK 101
Query: 172 PVRLSDLEKLQPRLLKSPNRSCGNNE 197
PV LE+LQ L + N S E
Sbjct: 102 PV---GLERLQVSLRNALNASALKGE 124
>gi|253700815|ref|YP_003022004.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter sp. M21]
gi|251775665|gb|ACT18246.1| response regulator receiver sensor signal transduction histidine
kinase [Geobacter sp. M21]
Length = 452
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 40 QPQQQQQETFH-VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNS 98
Q Q T H +L VDDS K+LE LL Y+V +G ALE +
Sbjct: 2 QTSNNGQTTPHLILIVDDSPTQAKLLEQLLAGEGYRVAVARNGSDALEQI---------- 51
Query: 99 NASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRV 157
E R +++++D MP M G++L +R++ + S K+ P+V+++ N PS V
Sbjct: 52 -----------NERRPDMVISDILMPEMDGFELCRRVREMESIKETPIVLLTHLNDPSDV 100
Query: 158 TMCLEEGAEEFLLKP 172
LE GA F+ KP
Sbjct: 101 LHSLEAGANYFVSKP 115
>gi|150017040|ref|YP_001309294.1| signal transduction histidine kinase LytS [Clostridium beijerinckii
NCIMB 8052]
gi|149903505|gb|ABR34338.1| signal transduction histidine kinase, LytS [Clostridium
beijerinckii NCIMB 8052]
Length = 1032
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/169 (23%), Positives = 81/169 (47%), Gaps = 23/169 (13%)
Query: 13 QEKQQLLENIPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSS 72
+++Q + NI + +L E + E +L VDD + + K+L+ + S+
Sbjct: 667 RQEQDIENNITTLRSDEKLSANILCEPTETKNNGEKLKILLVDDDVCNIKVLQEIFYDSN 726
Query: 73 YQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLL 132
Y+ +G ALE + K+ +++++ D MPG++GYD+
Sbjct: 727 YETLVAYNGVNALELV--------------------KKHKDISIVLLDVMMPGLSGYDVC 766
Query: 133 KRLKVSSWK--DVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLE 179
KR++ +K ++P+++++ + P + + E GA +FL KP +L+
Sbjct: 767 KRIR-KEYKLFELPILLLTVRSTPDDIALGFEAGANDFLTKPFNFMELK 814
>gi|154252497|ref|YP_001413321.1| two component sigma-54 specific Fis family transcriptional
regulator [Parvibaculum lavamentivorans DS-1]
gi|154156447|gb|ABS63664.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Parvibaculum lavamentivorans DS-1]
Length = 511
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 63/123 (51%), Gaps = 19/123 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD R+ILE ++ Y+ VD G+ AL Y LE A
Sbjct: 5 ILIVDDDPAQRRILEEVVNRDGYRAIPVDGGEAALAY------LEGPGGAE--------- 49
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++L++ D MPG+ G ++LKR+ + ++PV+V+++ V + EGA +F++
Sbjct: 50 ---ISLVILDLVMPGIDGMEVLKRVH-PNKPNLPVIVLTAHGGIETVVNVMREGASDFVV 105
Query: 171 KPV 173
KPV
Sbjct: 106 KPV 108
>gi|384252785|gb|EIE26260.1| hypothetical protein COCSUDRAFT_64410 [Coccomyxa subellipsoidea
C-169]
Length = 428
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 73/141 (51%), Gaps = 23/141 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL +D + +I+E LL+ +Y+VT +G +AL D L++N
Sbjct: 14 HVLLAEDDDLTLRIVEQLLKQCNYRVTVARNGQEAL------DILQHN------------ 55
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRL---KVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
++ +LI+TD MP + G DL+ + KV W +PV+VMSSE + GA
Sbjct: 56 DKHCFDLILTDIMMPKVDGMDLVCEVNQRKV--WSHLPVIVMSSEQSQEAICKAFTVGAA 113
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
++L+KP+R +++ L + +
Sbjct: 114 DYLIKPIRKNEVATLWHHIWR 134
>gi|320354561|ref|YP_004195900.1| Fis family two component sigma54 specific transcriptional regulator
[Desulfobulbus propionicus DSM 2032]
gi|320123063|gb|ADW18609.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobulbus propionicus DSM 2032]
Length = 460
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 22/137 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD L R+ L+ LL YQV G ALE + E
Sbjct: 6 ILVVDDELSMREFLKILLEKEGYQVATAADGQAALE---------------------RAE 44
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L++TD MPGM+G DLL RLK D+ V+++++ P ++ GA +++
Sbjct: 45 KTAFDLVITDIRMPGMSGLDLLARLK-QLQADIGVIMITAFASPDDAVTAMKSGAFDYIT 103
Query: 171 KPVRLSDLEKLQPRLLK 187
KP + +++ + +LK
Sbjct: 104 KPFNVDEIKTVIRAVLK 120
>gi|434406173|ref|YP_007149058.1| signal transduction histidine kinase [Cylindrospermum stagnale PCC
7417]
gi|428260428|gb|AFZ26378.1| signal transduction histidine kinase [Cylindrospermum stagnale PCC
7417]
Length = 1165
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 75/143 (52%), Gaps = 24/143 (16%)
Query: 33 DIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID 92
D + +QP E + +L VDD ++R++L N L + +Y++T SG +AL L
Sbjct: 716 DAIAKNRQPATNNPE-WSILIVDDEPVNRQVLVNHLSLYNYEITEAASGIEALAIL---- 770
Query: 93 NLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWK--DVPVVVMSS 150
P +LI+ D MP MTGYD+ ++++ +W+ ++P+V++++
Sbjct: 771 ----EGGLKP------------DLILLDVMMPRMTGYDVTRQIR-QTWQASELPIVLLTA 813
Query: 151 ENVPSRVTMCLEEGAEEFLLKPV 173
N S + + E GA ++L KP+
Sbjct: 814 RNQVSDLVVGFEAGANDYLTKPI 836
>gi|86748554|ref|YP_485050.1| two component, sigma54 specific, Fis family transcriptional
regulator [Rhodopseudomonas palustris HaA2]
gi|86571582|gb|ABD06139.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris HaA2]
Length = 500
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ DSGD A+ L T +
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAVLADSGDAAMALL------------------TAPD 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ + ++ D MPG+ G +L +++ + +VPV+V ++ V + GA +F++
Sbjct: 47 TAAFDAVVLDLVMPGLDGLGVLGKIREAGL-NVPVIVQTAHGGIDNVVSAMRAGAHDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNASALKGE 129
>gi|449464732|ref|XP_004150083.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
gi|449501499|ref|XP_004161384.1| PREDICTED: two-component response regulator ARR2-like [Cucumis
sativus]
Length = 673
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 92/192 (47%), Gaps = 31/192 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +L+ Y VT + + AL L ++
Sbjct: 39 VLVVDDDPTCLKILEKMLQNCCYAVTKCNRAEIALSML-------------------REN 79
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+++ + D+PV++MS+++ + V + GA ++L+
Sbjct: 80 KNGFDIVLSDVHMPDMDGFKLLEQVGLE--MDLPVIMMSADDGKNVVMKGVIHGACDYLI 137
Query: 171 KPVRLSDLEKLQPRLL-------KSPNRSCGNNEDSDNDNKNETSNYKSSTNSA---FSK 220
KPVR+ L L ++ K +S +E N +E +NY SS SK
Sbjct: 138 KPVRIEALRNLWQHVVRKRKTEWKDLEQSGSVDEGDREQNLSEGANYSSSAYEGSWNSSK 197
Query: 221 RKALSAEAPERR 232
R+ + E PE R
Sbjct: 198 RRRDAEEEPEER 209
>gi|319657095|gb|ADV58926.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657099|gb|ADV58928.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657103|gb|ADV58930.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 58/234 (24%)
Query: 35 PQQEKQPQQQQ-QETF------HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEY 87
PQ + QPQ + E F VL V+ R I+ LLR SY+V V +G +E
Sbjct: 75 PQPQVQPQGRVCWERFLPVGSPKVLLVESDDSTRHIVSALLRNCSYEVVGVPNG---IEA 131
Query: 88 LGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVV 146
++++L N +++L++T+ G++G LL + + S ++ PV+
Sbjct: 132 WKILEDLSN----------------QIDLVLTEVVTSGLSGIGLLSKIMSHKSCQNTPVI 175
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPN--------------RS 192
+MSS + V CL +GA +FL+KP+R ++L+ L + + + +S
Sbjct: 176 MMSSHDSMGLVLKCLSKGAVDFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESCVRNGKS 235
Query: 193 CGNN--EDSDNDNKN--------------ETSNYKSSTNSAFSKRKALSAEAPE 230
G+ E+SDND + + S+ S T S+++KR A E+P+
Sbjct: 236 IGSKRAEESDNDTDSNEEDDNRSIGLQARDGSDNGSGTQSSWTKR-AAEVESPQ 288
>gi|356538109|ref|XP_003537547.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 585
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 73/147 (49%), Gaps = 21/147 (14%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P++ VL VDD KILE +L+ +Y+VT AL L
Sbjct: 9 PRRDFPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLL------------ 56
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMC 160
++ + +++++D MP M G+ LL+ + + D+PV++MS + SRV
Sbjct: 57 -------RERKDGYDIVISDVNMPDMDGFKLLEHVGLE--MDLPVIMMSVDGETSRVMKG 107
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRLLK 187
++ GA ++LLKP+R+ +L + +L+
Sbjct: 108 VQHGACDYLLKPIRMKELRNIWQHVLR 134
>gi|449497396|ref|XP_004160390.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 70/132 (53%), Gaps = 22/132 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR Y+V V G KA E L K+
Sbjct: 65 LVEADDST--RQIITALLRKCCYRVAAVPDGLKAWEIL-------------------KER 103
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
V+LI+ + +P ++G+ LL + + K++PV++MSSE+ S V C+ +GA ++L
Sbjct: 104 PRNVDLILAEVELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYL 163
Query: 170 LKPVRLSDLEKL 181
+KP+R ++L L
Sbjct: 164 VKPLRRNELRNL 175
>gi|449456441|ref|XP_004145958.1| PREDICTED: two-component response regulator-like PRR95-like
[Cucumis sativus]
Length = 696
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 72/138 (52%), Gaps = 22/138 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR Y+V V G KA E L K+
Sbjct: 65 LVEADDST--RQIITALLRKCCYRVAAVPDGLKAWEIL-------------------KER 103
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
V+LI+ + +P ++G+ LL + + K++PV++MSSE+ S V C+ +GA ++L
Sbjct: 104 PRNVDLILAEVELPSISGFALLTLIMGHETCKNIPVIMMSSEDSISTVYKCMMKGAADYL 163
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KP+R ++L L + +
Sbjct: 164 VKPLRRNELRNLWQHVWR 181
>gi|281308390|gb|ADA58343.1| pseudo-response regulator 9 [Brassica rapa]
Length = 412
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 99/200 (49%), Gaps = 42/200 (21%)
Query: 39 KQPQQQQQETF------HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID 92
K P+ Q E + VL V+ R+I+ LL+ SY+V V G A E L
Sbjct: 10 KSPEVVQWEKYLPKTVLKVLLVESDDSTRQIITALLQKCSYKVVAVSDGLAAWETL---- 65
Query: 93 NLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSE 151
K++ + ++LI+T+ +P ++G+ LL ++ + K++PV++MSSE
Sbjct: 66 ---------------KEKSNEIDLILTELDLPAISGFALLALVMEHEACKNIPVIMMSSE 110
Query: 152 NVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNN-------------ED 198
+ + V C+ +GA ++L+KP+R ++L+ L + + G+N ED
Sbjct: 111 DSMTMVLKCMLKGAADYLIKPMRKNELKNLWQHVWRRLAVRDGHNGHGLSLPASQQNLED 170
Query: 199 SDN---DNKNETSNYKSSTN 215
SD D+ ++ S +++T+
Sbjct: 171 SDETSADHSDQGSGAQATTS 190
>gi|297735376|emb|CBI17816.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 73/144 (50%), Gaps = 21/144 (14%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPS 103
Q + VLAVDD+++ KIL LL Y+VT +ALE L EN N
Sbjct: 14 QFPDGLRVLAVDDNIVCLKILVTLLEQCRYKVTATTKACEALEMLR-----ENREN---- 64
Query: 104 TLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEE 163
++++TD MP M G+ LLK + + D+PV++ S + S V +
Sbjct: 65 ----------FDIVITDVKMPDMDGFTLLKIIGLEM--DIPVIMTSVNDDRSTVLKGIRH 112
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLK 187
GA ++LLKPVR+ +++ + +++
Sbjct: 113 GARDYLLKPVRVLEIKNIWQHVVR 136
>gi|126175395|ref|YP_001051544.1| putative CheW protein [Shewanella baltica OS155]
gi|153001700|ref|YP_001367381.1| putative CheW protein [Shewanella baltica OS185]
gi|160876438|ref|YP_001555754.1| putative CheW protein [Shewanella baltica OS195]
gi|217972364|ref|YP_002357115.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS223]
gi|373950525|ref|ZP_09610486.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS183]
gi|378709639|ref|YP_005274533.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS678]
gi|386323639|ref|YP_006019756.1| response regulator receiver modulated CheW protein [Shewanella
baltica BA175]
gi|386342138|ref|YP_006038504.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS117]
gi|418025496|ref|ZP_12664474.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS625]
gi|125998600|gb|ABN62675.1| putative CheW protein [Shewanella baltica OS155]
gi|151366318|gb|ABS09318.1| putative CheW protein [Shewanella baltica OS185]
gi|160861960|gb|ABX50494.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS195]
gi|217497499|gb|ACK45692.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS223]
gi|315268628|gb|ADT95481.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS678]
gi|333817784|gb|AEG10450.1| response regulator receiver modulated CheW protein [Shewanella
baltica BA175]
gi|334864539|gb|AEH15010.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS117]
gi|353535108|gb|EHC04672.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS625]
gi|373887125|gb|EHQ16017.1| response regulator receiver modulated CheW protein [Shewanella
baltica OS183]
Length = 326
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++E +L VDDS RK++EN LR + Y + G ALE L ++L NAS S
Sbjct: 190 KREAKTILIVDDSAFIRKMIENTLRSAGYNIITAKDGGDALEMLMEFESLAEQDNASISD 249
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEE 163
V+ ++TD MP M G L+KRL+ S +++ +P+V+ SS T +
Sbjct: 250 F--------VSAVITDVEMPRMDGMHLVKRLRESKAYQQMPIVMFSSLMSEDNRTKAMAL 301
Query: 164 GAEEFLLKP 172
GA + + KP
Sbjct: 302 GANDTITKP 310
>gi|52783225|sp|Q6LA42.2|APRR5_ARATH RecName: Full=Two-component response regulator-like APRR5; AltName:
Full=Pseudo-response regulator 5
gi|9758535|dbj|BAB08930.1| unnamed protein product [Arabidopsis thaliana]
gi|17063183|gb|AAL32986.1| pseudo-response regulator 5 protein [Arabidopsis thaliana]
gi|23506027|gb|AAN28873.1| At5g24470/T31K7_5 [Arabidopsis thaliana]
Length = 558
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 73/141 (51%), Gaps = 20/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
VL V+ R+I+ LLR SY+V V G KA E L
Sbjct: 49 ALRVLLVEADDSTRQIIAALLRKCSYRVAAVPDGLKAWEML------------------- 89
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
K + V+LI+T+ +P ++GY LL ++ K++PV++MS+++ + V C+ +GA
Sbjct: 90 KGKPESVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAA 149
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
++L+KP+R ++L L + +
Sbjct: 150 DYLVKPLRRNELRNLWQHVWR 170
>gi|407921335|gb|EKG14486.1| hypothetical protein MPH_08335 [Macrophomina phaseolina MS6]
Length = 357
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 36/181 (19%)
Query: 13 QEKQQLLENIPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSS 72
QE+Q LL +P + L D+ + KQ +L DD+ I+R I L+
Sbjct: 200 QEQQDLL--VPGTAK--TLSDLDRAGKQ----------ILIADDNEINRHIALRLISKRG 245
Query: 73 YQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLL 132
+ V V+ G AL++L +E++ N E R +LI+ D MP M GY+
Sbjct: 246 FSVNLVEDGRSALDFL-----IESSDN----------EWRRPDLILMDLQMPRMDGYEAT 290
Query: 133 KRLKVSS------W-KDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRL 185
+ ++ + W + +P++ M++ +P C G +F+LKP+R L+K+ +
Sbjct: 291 QAIRKGAMFDKMPWVRGIPIIAMTASAIPEEEAKCRSSGMNDFILKPLRAESLDKIVVKW 350
Query: 186 L 186
L
Sbjct: 351 L 351
>gi|115526099|ref|YP_783010.1| two component sigma54 specific Fis family transcriptional regulator
[Rhodopseudomonas palustris BisA53]
gi|115520046|gb|ABJ08030.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Rhodopseudomonas palustris BisA53]
Length = 495
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 69/135 (51%), Gaps = 22/135 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD + R+++EN+++ Y+ VD+GD A+ L T ++
Sbjct: 5 VLIVDDDPVQRRLVENMVQRCGYEAIVVDNGDAAIARL------------------TAED 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ ++ D MPG+ G +L +++ + VPV+V ++ V + GA++F++
Sbjct: 47 APAIDALVLDLVMPGLDGMGVLSKMREAGLA-VPVIVQTAHGGIDNVVSAMRAGAQDFVV 105
Query: 171 KPVRLSDLEKLQPRL 185
KPV +E+LQ L
Sbjct: 106 KPV---GIERLQVSL 117
>gi|157399678|gb|ABV53463.1| pseudo-response regulator 7 [Castanea sativa]
Length = 784
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 20/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL V++ R ++ LLR Y+VT ++G +A + L
Sbjct: 97 SLKVLLVENDDSTRHVVSALLRNCGYEVTAAENGLQAWKIL------------------- 137
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+ + V+L++T+ MP ++G LL + + + K++PV++MSS + + V CL +GA
Sbjct: 138 EDYTTHVDLVLTEVVMPCLSGIGLLSKIMSHKTCKNIPVIMMSSYDSMNIVFKCLSKGAV 197
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+FL KP+R ++L+ L + +
Sbjct: 198 DFLAKPIRKNELKNLWQHVWR 218
>gi|146293892|ref|YP_001184316.1| putative CheW protein [Shewanella putrefaciens CN-32]
gi|386314639|ref|YP_006010804.1| response regulator receiver modulated CheW protein [Shewanella
putrefaciens 200]
gi|145565582|gb|ABP76517.1| putative CheW protein [Shewanella putrefaciens CN-32]
gi|319427264|gb|ADV55338.1| response regulator receiver modulated CheW protein [Shewanella
putrefaciens 200]
Length = 326
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 66/129 (51%), Gaps = 9/129 (6%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++E +L VDDS RK++EN LR + Y + G ALE L + L + NAS S
Sbjct: 190 KREAKTILIVDDSAFIRKMIENTLRSAGYNIITAKDGGDALEMLMEFETLADQDNASISD 249
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEE 163
V+ I+TD MP M G L+KRL+ S +++ +P+V+ SS +
Sbjct: 250 F--------VSAIITDVEMPRMDGMHLVKRLRESKAYRQMPIVMFSSLMSEDNRIKAISL 301
Query: 164 GAEEFLLKP 172
GA + + KP
Sbjct: 302 GANDTITKP 310
>gi|224112925|ref|XP_002316333.1| pseudo response regulator [Populus trichocarpa]
gi|222865373|gb|EEF02504.1| pseudo response regulator [Populus trichocarpa]
Length = 763
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 76/143 (53%), Gaps = 20/143 (13%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
+ + VL V++ R ++ LLR Y+ T V +G L+ L+ +L N+
Sbjct: 86 RRSLKVLLVENDDSTRHVVSALLRNCGYEATAVANG---LQAWKLLQDLTNH-------- 134
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEG 164
++L++T+ MP ++G LL + + +++PV++MSS + + V CL +G
Sbjct: 135 --------IDLVLTEVAMPCLSGIGLLSNIMSHKTCRNIPVIMMSSHDSMNVVFRCLSKG 186
Query: 165 AEEFLLKPVRLSDLEKLQPRLLK 187
A +FL+KP+R ++L+ L + +
Sbjct: 187 AVDFLVKPIRKNELKILWQHVWR 209
>gi|345859615|ref|ZP_08811956.1| his Kinase A domain protein [Desulfosporosinus sp. OT]
gi|344327299|gb|EGW38736.1| his Kinase A domain protein [Desulfosporosinus sp. OT]
Length = 990
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 71/141 (50%), Gaps = 21/141 (14%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
++F VLAVDD + ++L++LL Y+V SG +A+E +
Sbjct: 657 QSFKVLAVDDEATNLRVLKSLLTGDGYKVLTASSGIEAIEII------------------ 698
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGA 165
K+ ++L++ D MP M+GY+ ++++ S D+P+++++ N +T+ E GA
Sbjct: 699 --KDHDDIDLVLMDVMMPKMSGYEACRKIREDYSLYDLPLLILTVRNTLEDITVGFEAGA 756
Query: 166 EEFLLKPVRLSDLEKLQPRLL 186
+F+ KP +L LL
Sbjct: 757 NDFVSKPFVAKELRARVATLL 777
>gi|21240982|ref|NP_640564.1| two-component system regulatory protein [Xanthomonas axonopodis pv.
citri str. 306]
gi|21106268|gb|AAM35100.1| two-component system regulatory protein [Xanthomonas axonopodis pv.
citri str. 306]
Length = 475
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 63/148 (42%), Gaps = 23/148 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+ VDD R +L LR + Y V DS AL+ LG+ +P
Sbjct: 9 HIWVVDDDRSVRFVLSTALRDAGYAVDGFDSAAAALQALGM--------RPTP------- 53
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+L+ TD MPG G LL +LK S +PV+VMS+ + GA EFL
Sbjct: 54 -----DLLFTDVRMPGEDGLTLLDKLK-SKHPHLPVIVMSAYTDVASTAGAFRGGAHEFL 107
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KP L D L R L P+ G E
Sbjct: 108 SKPFDLDDAVALAARAL--PDADAGVEE 133
>gi|428209660|ref|YP_007094013.1| CheA signal transduction histidine kinase [Chroococcidiopsis
thermalis PCC 7203]
gi|428011581|gb|AFY90144.1| CheA signal transduction histidine kinase [Chroococcidiopsis
thermalis PCC 7203]
Length = 888
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 76/164 (46%), Gaps = 31/164 (18%)
Query: 25 QEREGQLEDIPQQEKQPQQQQQETFH--------VLAVDDSLIDRKILENLLRVSSYQVT 76
QE Q P +Q + +QETF +L VDD++ R+ILE +L + Y+V
Sbjct: 733 QELLSQFSIAPATIRQ-ESSRQETFSATTEEIPKILIVDDAIAFRRILERILTAAGYKVV 791
Query: 77 CVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK 136
G +ALE L E R +L ++D MP + G LL+ ++
Sbjct: 792 QCRDGQEALEKL-------------------SSSEERFDLAISDLEMPRVDGLSLLREIR 832
Query: 137 VSS-WKDVPVVVMSS-ENVPSRVTMCLEEGAEEFLLKPVRLSDL 178
SS W+ +PV+V++S EN R T GA E+ KP DL
Sbjct: 833 ASSQWQKLPVIVLTSRENQWHRQT-AFGLGATEYFTKPFCTDDL 875
>gi|413925155|gb|AFW65087.1| hypothetical protein ZEAMMB73_389889 [Zea mays]
Length = 319
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 56/96 (58%), Gaps = 1/96 (1%)
Query: 114 VNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKP 172
+L++T+ MP ++G LL R+ + K++PVV+MSS++ V C+++GA +FL+KP
Sbjct: 14 FDLVLTEVAMPSLSGIQLLSRIVAADECKNIPVVMMSSQDSIGTVLKCMQKGAVDFLVKP 73
Query: 173 VRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETS 208
VR ++L L + + +C N +N N S
Sbjct: 74 VRKNELRNLWQHVWRRHAMNCQTNGSENNAASNHIS 109
>gi|255556280|ref|XP_002519174.1| sensor histidine kinase, putative [Ricinus communis]
gi|223541489|gb|EEF43038.1| sensor histidine kinase, putative [Ricinus communis]
Length = 682
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 84/172 (48%), Gaps = 28/172 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + + AL L ++
Sbjct: 35 VLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLL-------------------REN 75
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS++ S V + GA ++L+
Sbjct: 76 KNGYDIVISDVHMPDMDGFKLLEHIGLE--MDLPVIMMSADEAKSVVMKGVTHGACDYLI 133
Query: 171 KPVRLSDLEKLQPRLLKSPNR------SCGNNEDSDNDNK-NETSNYKSSTN 215
KPVR+ L+ + +++ G+ E+ D K +E ++Y SS N
Sbjct: 134 KPVRIEALKNIWQHVVRKKRNEWKDLEQSGSVEEGDRQPKQSEDADYSSSAN 185
>gi|319657093|gb|ADV58925.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657097|gb|ADV58927.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
gi|319657101|gb|ADV58929.1| bolting time control 1 [Beta vulgaris subsp. vulgaris]
Length = 788
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 100/211 (47%), Gaps = 51/211 (24%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+ R I+ LLR SY+V V +G +E ++++L N
Sbjct: 98 VLLVESDDSTRHIVSALLRKCSYEVVGVPNG---IEAWKILEDLSN-------------- 140
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+++L++T+ G++G LL + + S ++ PV++MSS + V CL +GA +FL
Sbjct: 141 --QIDLVLTEVVTSGLSGIGLLSKIMSHKSCQNTPVIMMSSHDSMGLVLKCLSKGAVDFL 198
Query: 170 LKPVRLSDLEKLQPRLLKSPN--------------RSCGNN--EDSDNDN---------- 203
+KP+R ++L+ L + + + +S G+ E+SDND
Sbjct: 199 VKPIRKNELKNLWQHVWRRCHSSSGSGSESCVRNGKSIGSKRAEESDNDTDINEEDDNRS 258
Query: 204 ----KNETSNYKSSTNSAFSKRKALSAEAPE 230
+ S+ S T S+++KR A E+P+
Sbjct: 259 IGLQARDGSDNGSGTQSSWTKR-AAEVESPQ 288
>gi|319788712|ref|YP_004090027.1| response regulator receiver modulated metal dependent
phosphohydrolase [Ruminococcus albus 7]
gi|315450579|gb|ADU24141.1| response regulator receiver modulated metal dependent
phosphohydrolase [Ruminococcus albus 7]
Length = 490
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 69/133 (51%), Gaps = 22/133 (16%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
E + + +DD + KI E +L + Y+V C+D G+ LEY ++NN
Sbjct: 2 EHYTIAVIDDDKGNLKIAERILSLYGYRVVCLDCGEALLEY------IKNN--------- 46
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGA 165
+ +L++ D M G+ G++ L++LK + +D+PV++++++ P T L GA
Sbjct: 47 ------KPDLMLLDIHMTGINGFETLQKLKSNHEVRDIPVIILTADGDPETETKALSAGA 100
Query: 166 EEFLLKPVRLSDL 178
+F+ KP S L
Sbjct: 101 ADFVAKPFVASVL 113
>gi|395793685|ref|ZP_10473042.1| putative sensory box GGDEF/EAL domain-containing protein
[Pseudomonas sp. Ag1]
gi|421138884|ref|ZP_15598935.1| sensory box protein/response regulator [Pseudomonas fluorescens
BBc6R8]
gi|395342171|gb|EJF73955.1| putative sensory box GGDEF/EAL domain-containing protein
[Pseudomonas sp. Ag1]
gi|404509930|gb|EKA23849.1| sensory box protein/response regulator [Pseudomonas fluorescens
BBc6R8]
Length = 422
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 22/124 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD + RK+LE LLR YQ SG++AL+ + + P
Sbjct: 8 LLIVDDEIQVRKLLETLLRHEGYQTVSAASGEEALQLV---------AQRPP-------- 50
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+LI+ D MPGM GY++ +LK + + ++P++++S+ + S LE GAEEF+
Sbjct: 51 ----DLILLDIMMPGMDGYEVANQLKGNQATANIPIIMLSALSESSARLSGLETGAEEFI 106
Query: 170 LKPV 173
KPV
Sbjct: 107 SKPV 110
>gi|334118625|ref|ZP_08492714.1| integral membrane sensor hybrid histidine kinase [Microcoleus
vaginatus FGP-2]
gi|333459632|gb|EGK88245.1| integral membrane sensor hybrid histidine kinase [Microcoleus
vaginatus FGP-2]
Length = 941
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD + ++ NLL ++VT +G + LE K E
Sbjct: 726 VLVVDDKWENLSVIVNLLEPLGFEVTEAKNGQEGLE---------------------KVE 764
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E + +LI+TD MP + G+++++R++ +S +KDV ++ S+ + LE GA +F+
Sbjct: 765 EFKFDLIITDLVMPVLDGFEMMRRIRNLSHYKDVAIIASSASVFATDQHKSLEGGANDFV 824
Query: 170 LKPVRLSDLEKLQPRLLK 187
KPV+ +L ++ + LK
Sbjct: 825 GKPVQAEELFEILHKYLK 842
>gi|285018130|ref|YP_003375841.1| regulation of pathogenicity factor rpfc protein [Xanthomonas
albilineans GPE PC73]
gi|283473348|emb|CBA15853.1| probable regulation of pathogenicity factor rpfc protein
[Xanthomonas albilineans GPE PC73]
Length = 725
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 23/128 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ +L DD +R +L+ +L+ + ++ CVD + L+ L
Sbjct: 462 SMRILVADDHAANRMVLQRMLQKAGHRSICVDGAEAVLDALA------------------ 503
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV--SSWKDVPVVVMSSENVPSRVTMCLEEGA 165
ES + ++ D MP M+G D+LK+L+V + PVV+ S++ P + C + GA
Sbjct: 504 ---ESEFDAVIVDLHMPDMSGLDMLKQLRVMHAGGLRTPVVMFSADVTPESIKRCEQAGA 560
Query: 166 EEFLLKPV 173
FL KPV
Sbjct: 561 HSFLAKPV 568
>gi|406676890|ref|ZP_11084075.1| hypothetical protein HMPREF1170_02283 [Aeromonas veronii AMC35]
gi|404625204|gb|EKB22021.1| hypothetical protein HMPREF1170_02283 [Aeromonas veronii AMC35]
Length = 608
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 23/130 (17%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
QE++ +L VDD+ +RK++ +L +QVT G++ALE LG
Sbjct: 471 QESYRILLVDDNATNRKVIGAMLDSVGHQVTLAVQGEEALEKLG---------------- 514
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS--WKDVPVVVMSSENVPSRVTMCLEE 163
+ +L++ D MP M G R++ S W D+P++ ++++ +P L
Sbjct: 515 -----HTEFDLVLMDVQMPVMDGLVATTRIRTSQMPWADIPIIALTADAMPESKQYYLSH 569
Query: 164 GAEEFLLKPV 173
G ++ KP+
Sbjct: 570 GMNGYITKPI 579
>gi|423200016|ref|ZP_17186596.1| hypothetical protein HMPREF1167_00179 [Aeromonas veronii AER39]
gi|404621077|gb|EKB17970.1| hypothetical protein HMPREF1167_00179 [Aeromonas veronii AER39]
Length = 608
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 23/130 (17%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
QE++ +L VDD+ +RK++ +L +QVT G++ALE LG
Sbjct: 471 QESYRILLVDDNATNRKVIGAMLDSVGHQVTLAVQGEEALEKLG---------------- 514
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS--WKDVPVVVMSSENVPSRVTMCLEE 163
+ +L++ D MP M G R++ S W D+P++ ++++ +P L
Sbjct: 515 -----HTEFDLVLMDVQMPVMDGLVATTRIRTSQMPWADIPIIALTADAMPESKQYYLSH 569
Query: 164 GAEEFLLKPV 173
G ++ KP+
Sbjct: 570 GMNGYITKPI 579
>gi|418521223|ref|ZP_13087268.1| two-component system regulatory protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410702772|gb|EKQ61272.1| two-component system regulatory protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 475
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 63/148 (42%), Gaps = 23/148 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+ VDD R +L LR + Y V DS AL+ LG+ +P
Sbjct: 9 HIWVVDDDRSVRFVLSTALRDAGYAVDGFDSAAAALQALGM--------RPTP------- 53
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+L+ TD MPG G LL +LK S +PV+VMS+ + GA EFL
Sbjct: 54 -----DLLFTDVRMPGEDGLTLLDKLK-SKHPQLPVIVMSAYTDVASTAGAFRGGAHEFL 107
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KP L D L R L P+ G E
Sbjct: 108 SKPFDLDDAVALAARAL--PDADAGVEE 133
>gi|414591290|tpg|DAA41861.1| TPA: hypothetical protein ZEAMMB73_323779 [Zea mays]
Length = 657
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Query: 114 VNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKP 172
++L++T+ MPG++G LL R ++ + +K++PV++MSS + S V CL +GA +FL+KP
Sbjct: 57 IDLVLTEVFMPGVSGISLLSRIMRHNIFKNIPVIMMSSSDDMSTVFKCLSKGAVDFLVKP 116
Query: 173 VRLSDLEKLQPRLLK 187
+R ++L+ L + +
Sbjct: 117 IRKNELKNLWQHVWR 131
>gi|356529278|ref|XP_003533222.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 673
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 87/179 (48%), Gaps = 28/179 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + AL L ++
Sbjct: 31 VLVVDDDPTCLMILERMLRACLYEVTKCKRAEVALSLL-------------------REN 71
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS+++ V + GA ++L+
Sbjct: 72 KNGFDIVLSDVHMPDMDGFKLLEHIGLE--MDLPVIMMSADDGKQVVMKGVTHGACDYLI 129
Query: 171 KPVRLSDLEKLQP---RLLKSPNRSC---GNNEDSDNDNKN-ETSNYKSSTNSAFSKRK 222
KPVR+ L+ + R+ K+ R G+ E+ D K + NY SS N A S +K
Sbjct: 130 KPVRIEALKNIWQHVVRMRKNGLRDVEQSGSMEEGDRPPKGSDDGNYSSSVNEAKSSKK 188
>gi|330829872|ref|YP_004392824.1| response regulator receiver [Aeromonas veronii B565]
gi|423209428|ref|ZP_17195982.1| hypothetical protein HMPREF1169_01500 [Aeromonas veronii AER397]
gi|328805008|gb|AEB50207.1| Response regulator receiver [Aeromonas veronii B565]
gi|404617286|gb|EKB14222.1| hypothetical protein HMPREF1169_01500 [Aeromonas veronii AER397]
Length = 608
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 23/130 (17%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
QE++ +L VDD+ +RK++ +L +QVT G++ALE LG
Sbjct: 471 QESYRILLVDDNATNRKVIGAMLDSVGHQVTLAVQGEEALEKLG---------------- 514
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS--WKDVPVVVMSSENVPSRVTMCLEE 163
+ +L++ D MP M G R++ S W D+P++ ++++ +P L
Sbjct: 515 -----HTEFDLVLMDVQMPVMDGLVATTRIRTSQMPWADIPIIALTADAMPESKQYYLSH 569
Query: 164 GAEEFLLKPV 173
G ++ KP+
Sbjct: 570 GMNGYITKPI 579
>gi|418515970|ref|ZP_13082147.1| two-component system regulatory protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410707304|gb|EKQ65757.1| two-component system regulatory protein [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 475
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 63/148 (42%), Gaps = 23/148 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+ VDD R +L LR + Y V DS AL+ LG+ +P
Sbjct: 9 HIWVVDDDRSVRFVLSTALRDAGYAVDGFDSAAAALQALGM--------RPTP------- 53
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+L+ TD MPG G LL +LK S +PV+VMS+ + GA EFL
Sbjct: 54 -----DLLFTDVRMPGEDGLTLLDKLK-SKHPQLPVIVMSAYTDVASTAGAFRGGAHEFL 107
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KP L D L R L P+ G E
Sbjct: 108 SKPFDLDDAVALAARAL--PDADAGVEE 133
>gi|255584969|ref|XP_002533196.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
gi|223526994|gb|EEF29188.1| two-component sensor histidine kinase bacteria, putative [Ricinus
communis]
Length = 669
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 81/172 (47%), Gaps = 28/172 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD +ILE +LR Y VT AL L ++
Sbjct: 45 VLVVDDDTTCLRILEQMLRRCLYHVTTCSQAKVALNLL-------------------RER 85
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS++ S V + GA ++L+
Sbjct: 86 KGCFDVVLSDVHMPDMDGFKLLEHVGLE--MDLPVIMMSADGRTSAVMRGIRHGACDYLI 143
Query: 171 KPVRLSDLEKLQPRLLKSPNR------SCGNNEDSDNDNK-NETSNYKSSTN 215
KP+R +L+ + +++ G+ ED+D + NE + Y SS N
Sbjct: 144 KPIREEELKNIWQHVVRKKWHENKEIEHSGSLEDNDRHKRGNEDAEYTSSVN 195
>gi|408375521|ref|ZP_11173186.1| sensor histidine kinase [Alcanivorax hongdengensis A-11-3]
gi|407764598|gb|EKF73070.1| sensor histidine kinase [Alcanivorax hongdengensis A-11-3]
Length = 739
Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats.
Identities = 45/187 (24%), Positives = 87/187 (46%), Gaps = 26/187 (13%)
Query: 16 QQLLENIPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQV 75
+Q L + +R+ + D P Q + +Q++++ F +L V+D+ +++ + +L YQV
Sbjct: 575 RQALARLMGLQRQVPVGDAPLQTPE-EQKRRKRFRLLLVEDNEVNQLVTRGMLSKLGYQV 633
Query: 76 TCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRL 135
V +G+ AL + E+ +L++ D MP M G+++ +RL
Sbjct: 634 KTVSNGETALALM---------------------EQEGFDLVLMDCMMPDMDGFEVTRRL 672
Query: 136 KVSSWKD----VPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNR 191
+ ++ PVV +++ CL G ++FL KPV L LE + R L
Sbjct: 673 REREQQEESGRTPVVAITANTAEGVQARCLAAGMDDFLGKPVHLDALETVLRRWLPDEPM 732
Query: 192 SCGNNED 198
G+ ++
Sbjct: 733 DQGDEDE 739
>gi|332664021|ref|YP_004446809.1| guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
gi|332332835|gb|AEE49936.1| adenylate/guanylate cyclase [Haliscomenobacter hydrossis DSM 1100]
Length = 1609
Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/127 (25%), Positives = 72/127 (56%), Gaps = 21/127 (16%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
E H+L VDD ++++++L+N L + Y++T V SG++AL+ L
Sbjct: 1196 EKVHILIVDDEVVNQQVLKNFLNKAIYRITQVLSGEEALQVL------------------ 1237
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGA 165
++ ++L++ D MP M+GY++ ++++ ++PV++++++N S + L GA
Sbjct: 1238 --DDDDTIDLVLLDVMMPRMSGYEVCQKIREKHLPSELPVLMITAKNQVSDLVTGLNTGA 1295
Query: 166 EEFLLKP 172
+++ KP
Sbjct: 1296 NDYIAKP 1302
>gi|299132061|ref|ZP_07025256.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Afipia sp. 1NLS2]
gi|298592198|gb|EFI52398.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Afipia sp. 1NLS2]
Length = 498
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R++LEN+++ YQ V+SGD A+ + E
Sbjct: 5 ILIADDDAVQRRLLENMVQRCGYQTIVVESGDAAMTVI-------------------ADE 45
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
V+ I+ D MPG+ G +L +++ +PVVV ++ V + GA +F++
Sbjct: 46 MRTVDAIVLDLVMPGLDGLGVLSKMREMGLH-IPVVVQTAHGGIDNVVSAMRAGAHDFVV 104
Query: 171 KPVRLSDLEKLQPRL 185
KPV +E+LQ L
Sbjct: 105 KPV---GIERLQVSL 116
>gi|42570473|ref|NP_850600.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|222423228|dbj|BAH19591.1| AT3G16857 [Arabidopsis thaliana]
gi|332642354|gb|AEE75875.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 669
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + + AL L +K
Sbjct: 39 VLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLL-------------------RKN 79
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS+++ S V + GA ++L+
Sbjct: 80 KHGFDIVISDVHMPDMDGFKLLEHVGLE--MDLPVIMMSADDSKSVVLKGVTHGAVDYLI 137
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ L+ + +++
Sbjct: 138 KPVRMEALKNIWQHVVR 154
>gi|46107708|ref|XP_380913.1| hypothetical protein FG00737.1 [Gibberella zeae PH-1]
Length = 1370
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 85/187 (45%), Gaps = 23/187 (12%)
Query: 11 PQQEKQQLLENIPQQEREGQLE-DIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLR 69
P E Q + P++ R G P QE P ++ + HVL V+D+ I++KI +
Sbjct: 1066 PVSEGMQGNTSGPRRARFGITSTSSPDQELLPSERAK--IHVLVVEDNPINQKIATKTIG 1123
Query: 70 VSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGY 129
+QVT +G +ALEYL ++ N P ++I+ D MP + GY
Sbjct: 1124 RLGFQVTAAWNGKEALEYLA---GVQKGVNQKP------------DIILMDVQMPIIDGY 1168
Query: 130 DLLKRLKVSS-----WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPR 184
L+ +DVP+V M++ + C + G +++L KPVR LEK+ R
Sbjct: 1169 KCTHLLRHHMPYKPLVQDVPIVAMTASAIQGDREKCTKAGMDDYLAKPVRGVILEKMLLR 1228
Query: 185 LLKSPNR 191
+ R
Sbjct: 1229 WCHARRR 1235
>gi|4210449|dbj|BAA74528.1| ARR1 protein [Arabidopsis thaliana]
Length = 669
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + + AL L +K
Sbjct: 39 VLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLL-------------------RKN 79
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS+++ S V + GA ++L+
Sbjct: 80 KHGFDIVISDVHMPDMDGFKLLEHVGLE--MDLPVIMMSADDSKSVVLKGVTHGAVDYLI 137
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ L+ + +++
Sbjct: 138 KPVRMEALKNIWQHVVR 154
>gi|359794219|ref|ZP_09296936.1| putative adenylate/guanylate cyclase [Mesorhizobium alhagi
CCNWXJ12-2]
gi|359249531|gb|EHK53132.1| putative adenylate/guanylate cyclase [Mesorhizobium alhagi
CCNWXJ12-2]
Length = 516
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 58/123 (47%), Gaps = 22/123 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD +R +L L +QV +SG AL L
Sbjct: 176 ILVVDDIGSNRDLLSRRLLHDGHQVFTAESGLSALTCLA--------------------- 214
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E +L++ D MP M G ++L RLK W+ +PV+++S N V C+E GA+++L
Sbjct: 215 EDEFDLVLLDLLMPDMNGIEVLSRLKAERRWRHIPVIMISGLNEVDAVVRCIEAGADDYL 274
Query: 170 LKP 172
LKP
Sbjct: 275 LKP 277
>gi|356507378|ref|XP_003522444.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 656
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 83/168 (49%), Gaps = 30/168 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD +L+ LL+ Y VT + KAL L ++
Sbjct: 20 VLAVDDDPTCLLVLKTLLQRCQYHVTTTNQAIKALALL-------------------REH 60
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ + +L+++D MP M G+ LL+ + + D+PV+++S+ V + GA ++LL
Sbjct: 61 KDKFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSANGDTKMVMKGISHGACDYLL 118
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNY-KSSTNSA 217
KPVR+ +L+ + +++ + D+ KN+TSN K ++NS
Sbjct: 119 KPVRMEELKNIWQHVIR--------RKKFDSKEKNKTSNLDKPTSNSG 158
>gi|15810171|gb|AAL06987.1| AT3g16857/MUH15_1 [Arabidopsis thaliana]
Length = 690
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + + AL L +K
Sbjct: 39 VLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLL-------------------RKN 79
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS+++ S V + GA ++L+
Sbjct: 80 KHGFDIVISDVHMPDMDGFKLLEHVGLE--MDLPVIMMSADDSKSVVLKGVTHGAVDYLI 137
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ L+ + +++
Sbjct: 138 KPVRMEALKNIWQHVVR 154
>gi|356571269|ref|XP_003553801.1| PREDICTED: two-component response regulator-like PRR95-like
[Glycine max]
Length = 695
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR Y+V G KA E L K +
Sbjct: 37 LVEADDST--RQIIAALLRKCGYKVVAFCDGLKAWETL-------------------KNK 75
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++LI+T+ +P ++G+ LL ++ K++PV++MSS + S V C+ +GA +FL
Sbjct: 76 AFDLDLILTEVDLPSISGFSLLTLIMEHDICKNIPVIMMSSHDSVSMVFKCMLKGAADFL 135
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KPVR ++L L + +
Sbjct: 136 IKPVRKNELRNLWQHVWR 153
>gi|408399309|gb|EKJ78418.1| hypothetical protein FPSE_01392 [Fusarium pseudograminearum CS3096]
Length = 1368
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 76/162 (46%), Gaps = 22/162 (13%)
Query: 35 PQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNL 94
P QE P ++ + HVL V+D+ I++KI + +QVT +G +ALEYL +
Sbjct: 1091 PDQELPPSERAK--IHVLVVEDNPINQKIATKTIGRLGFQVTAAWNGKEALEYLA---GV 1145
Query: 95 ENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-----WKDVPVVVMS 149
+ N P ++I+ D MP + GY L+ +DVP+V M+
Sbjct: 1146 QKGINQKP------------DIILMDVQMPIIDGYKCTHLLRHHMPYKPLVQDVPIVAMT 1193
Query: 150 SENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNR 191
+ + C + G +++L KPVR LEK+ R + R
Sbjct: 1194 ASAIQGDREKCTKAGMDDYLAKPVRGVILEKMLLRWCHARRR 1235
>gi|258514818|ref|YP_003191040.1| multi-sensor hybrid histidine kinase [Desulfotomaculum acetoxidans
DSM 771]
gi|257778523|gb|ACV62417.1| multi-sensor hybrid histidine kinase [Desulfotomaculum acetoxidans
DSM 771]
Length = 1172
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 22/149 (14%)
Query: 38 EKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENN 97
E + ++ +++L +D ++++KI+E+ L ++VT V G + L L
Sbjct: 934 ESDGGESGKKAYNILVAEDHILNQKIIESFLVTEGHRVTMVKDGAEVLHAL--------- 984
Query: 98 SNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSENVPSR 156
+ + +LI+ D MP M GY+ + R++ W +P+V +++ +
Sbjct: 985 ------------KSNNFDLILMDMQMPTMDGYETMARIRAEKKWGSMPIVAITAYAMKGD 1032
Query: 157 VTMCLEEGAEEFLLKPVRLSDLEKLQPRL 185
C E G +L KP+R +DL L R+
Sbjct: 1033 EEKCFEAGCNYYLSKPIRKADLISLIDRI 1061
>gi|388569545|ref|ZP_10155937.1| periplasmic sensor hybrid histidine kinase [Hydrogenophaga sp. PBC]
gi|388263294|gb|EIK88892.1| periplasmic sensor hybrid histidine kinase [Hydrogenophaga sp. PBC]
Length = 1150
Score = 63.2 bits (152), Expect = 9e-08, Method: Composition-based stats.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 20/157 (12%)
Query: 26 EREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKAL 85
E +G L + ++ +QP + VL VD+ DR++L+ L ++V SGD AL
Sbjct: 917 EMQGALP-VRERVEQPLGYEGAARRVLVVDNEEADRELLQRWLEPLGFEVQLARSGDHAL 975
Query: 86 EYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPV 145
E L+ L+ +P + + D MPG+ G++ +RL+ W VP+
Sbjct: 976 E---LLAGLQPGDPGAP------------HAVFLDLAMPGIDGWETRRRLRAGGWAGVPL 1020
Query: 146 VVMSSENVPSRVTMCLEEG----AEEFLLKPVRLSDL 178
++S+ + L+ G ++F +KPVR S+L
Sbjct: 1021 AIVSANAFDKGLHSELDPGEALPPQDFFVKPVRRSEL 1057
>gi|254477960|ref|ZP_05091345.1| sensor histidine kinase/response regulator [Ruegeria sp. R11]
gi|214028545|gb|EEB69381.1| sensor histidine kinase/response regulator [Ruegeria sp. R11]
Length = 760
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 52/164 (31%), Positives = 80/164 (48%), Gaps = 23/164 (14%)
Query: 34 IPQQEKQPQ--QQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI 91
+ + ++QP+ + E +VL VDD ++R IL L V SGD ALE L
Sbjct: 466 VREHQRQPRVDEVSLEGLNVLVVDDLELNRIILNERLDTWGVNTVAVASGDAALETL--- 522
Query: 92 DNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSS 150
L + E ++I+ D+ MPGM G++L +R++ + + D+P+V++SS
Sbjct: 523 -------------LDARHEGRSFDIILQDFQMPGMDGHELARRIRDIPEYVDLPIVILSS 569
Query: 151 -ENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK--SPNR 191
EN + T G E LKPVR S L + + L SP R
Sbjct: 570 VENTIDQYTR-ERLGRCEVALKPVRASQLRAVMSKALNGGSPAR 612
Score = 37.7 bits (86), Expect = 4.5, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 61/137 (44%), Gaps = 25/137 (18%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
Q +L +D+ ++ ++ +L+ + +V +G+ A++
Sbjct: 627 QPQLKLLLAEDNKTNQLVVTRMLKSAPIEVIVASNGEDAVDLF----------------- 669
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDL---LKRLKVS-SWKDVPVVVMSSENVPSRVTMCL 161
+ R ++++ D MP G + ++ L+ S +W PVV +++ + S CL
Sbjct: 670 ----KAHRPDIVLMDMMMPQKDGIEATGDIRALEASRNWPRCPVVALTANALQSHKEQCL 725
Query: 162 EEGAEEFLLKPVRLSDL 178
G ++FL KP++ +L
Sbjct: 726 AAGMDDFLSKPIKKQEL 742
>gi|449524812|ref|XP_004169415.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 794
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 105/217 (48%), Gaps = 57/217 (26%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V++ R ++ LLR SY+V +G L ++++L N+
Sbjct: 91 VLLVENDDSTRHLVTALLRNCSYEVIAAANG---LHAWKMLEDLTNH------------- 134
Query: 111 ESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++L++T+ MP ++G LL K + + K++PV++MSS + V CL +GA +FL
Sbjct: 135 ---IDLVLTEVVMPCLSGIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFL 191
Query: 170 LKPVRLSDLEKLQPRLL---------------------------KSPNRSCGNNEDSDND 202
+KP+R ++L+ L + KS N + G+N+D + D
Sbjct: 192 VKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSVEKSDNNT-GSNDDEEED 250
Query: 203 NKN------ETSNYKSSTNSAFSKRKALSAEAPERRP 233
N++ + S+ S T S+++K +A+ E+P RP
Sbjct: 251 NESIGFNIADGSDDGSGTQSSWTK-QAIEVESP--RP 284
>gi|18420797|ref|NP_568446.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
gi|10281006|dbj|BAB13743.1| pseudo-response regulator 5 [Arabidopsis thaliana]
gi|332005931|gb|AED93314.1| two-component response regulator-like APRR5 [Arabidopsis thaliana]
Length = 667
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 74/138 (53%), Gaps = 22/138 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR SY+V V G KA E L K +
Sbjct: 163 LVEADDST--RQIIAALLRKCSYRVAAVPDGLKAWEML-------------------KGK 201
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
V+LI+T+ +P ++GY LL ++ K++PV++MS+++ + V C+ +GA ++L
Sbjct: 202 PESVDLILTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYL 261
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KP+R ++L L + +
Sbjct: 262 VKPLRRNELRNLWQHVWR 279
>gi|297830298|ref|XP_002883031.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
gi|297328871|gb|EFH59290.1| hypothetical protein ARALYDRAFT_479152 [Arabidopsis lyrata subsp.
lyrata]
Length = 687
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + + AL L +K
Sbjct: 37 VLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLL-------------------RKN 77
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS+++ S V + GA ++L+
Sbjct: 78 KHGFDIVISDVHMPDMDGFKLLEHVGLE--MDLPVIMMSADDSKSVVLKGVTHGAVDYLI 135
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ L+ + +++
Sbjct: 136 KPVRMEALKNIWQHVVR 152
>gi|42564262|ref|NP_566561.2| two-component response regulator ARR1 [Arabidopsis thaliana]
gi|50400604|sp|Q940D0.2|ARR1_ARATH RecName: Full=Two-component response regulator ARR1
gi|11994744|dbj|BAB03073.1| ARR1 protein [Arabidopsis thaliana]
gi|51971120|dbj|BAD44252.1| putative ARR1 protein [Arabidopsis thaliana]
gi|332642355|gb|AEE75876.1| two-component response regulator ARR1 [Arabidopsis thaliana]
Length = 690
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + + AL L +K
Sbjct: 39 VLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLL-------------------RKN 79
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS+++ S V + GA ++L+
Sbjct: 80 KHGFDIVISDVHMPDMDGFKLLEHVGLE--MDLPVIMMSADDSKSVVLKGVTHGAVDYLI 137
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ L+ + +++
Sbjct: 138 KPVRMEALKNIWQHVVR 154
>gi|226497556|ref|NP_001141486.1| uncharacterized protein LOC100273598 [Zea mays]
gi|194704770|gb|ACF86469.1| unknown [Zea mays]
gi|414886440|tpg|DAA62454.1| TPA: hypothetical protein ZEAMMB73_402220 [Zea mays]
Length = 629
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 22/134 (16%)
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DDS R ++ LLR Y+V G KA + L K++ V
Sbjct: 51 DDST--RHVISALLRKCGYRVAAASDGVKAWDLL-------------------KEKSFNV 89
Query: 115 NLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+L++T+ +P M+G+ LL ++ + K++PV++MSS + S V C+ +GA +FL+KP+
Sbjct: 90 DLVLTEVELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPI 149
Query: 174 RLSDLEKLQPRLLK 187
R ++L L + +
Sbjct: 150 RKNELRNLWQHVWR 163
>gi|108864017|gb|ABG22374.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
Length = 620
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 114 VNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKP 172
+L++T+ MP ++G +LL R+ S K++PV++MSS++ V C+++GA +FL+KP
Sbjct: 14 FDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKP 73
Query: 173 VRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSK 220
VR ++L L + + R N++ + ++N N SN+ S+ SK
Sbjct: 74 VRKNELRNLWQHVWR---RHAMNSQTNASEN-NAASNHLSANGGNGSK 117
>gi|357125033|ref|XP_003564200.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 654
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 76/158 (48%), Gaps = 24/158 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD + K+LE LLR Y VT + AL+ L ++
Sbjct: 28 VLAVDDDPVCLKVLETLLRRCQYHVTATNQAITALKLL-------------------REN 68
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +L+++D MP M G+ LL+ + + D+PV+++S V + GA ++LL
Sbjct: 69 KDMFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSVNGETKTVLKGITHGACDYLL 126
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETS 208
KPVR+ +L + +++ R N E S+ D E S
Sbjct: 127 KPVRIEELRNVWQHVVR---RKFSNREPSNLDFCKEFS 161
>gi|335419721|ref|ZP_08550769.1| sensor protein gacS [Salinisphaera shabanensis E1L3A]
gi|334896048|gb|EGM34204.1| sensor protein gacS [Salinisphaera shabanensis E1L3A]
Length = 1212
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 68/136 (50%), Gaps = 21/136 (15%)
Query: 52 LAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEE 111
L VDD + + L LR +V G KAL+ L A+P
Sbjct: 1097 LLVDDDMRNTFALSRALREKGLKVLMASDGFKALDQLA----------ANP--------- 1137
Query: 112 SRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+V +++ D MPGM GY+ ++R++ S ++ +P++ ++++ + C+E GA E+L
Sbjct: 1138 -QVTIVLMDIMMPGMDGYETIRRIRAQSEYETLPIIALTAKAMTGDREKCIEAGATEYLP 1196
Query: 171 KPVRLSDLEKLQPRLL 186
KP+ + L KL RLL
Sbjct: 1197 KPLDIQALLKLMARLL 1212
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 26/184 (14%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL +DD + +I+ + + +GD+ L+ +
Sbjct: 825 HVLIIDDDMDFARIVAKAAEERGFDCSTASNGDRGLDMV--------------------- 863
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ + I+ D +PGM G+ +L RLK + +++PV ++S+ + R + GA +
Sbjct: 864 RQQLPDAIVLDLGLPGMDGWAVLDRLKANERTRNIPVHIVSAADDNGR---SKQAGAVGY 920
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETS-NYKSSTNSAFSKRKALSAE 227
L KPV DLE L R R D+D T+ N+ T S AE
Sbjct: 921 LSKPVSKEDLETLFARAEVLSGRQARRVLVVDDDRGAHTAINHLLQTESVDITAVVSGAE 980
Query: 228 APER 231
A +R
Sbjct: 981 AIQR 984
>gi|436842876|ref|YP_007327254.1| Multi-sensor hybrid histidine kinase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432171782|emb|CCO25155.1| Multi-sensor hybrid histidine kinase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 826
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 64/124 (51%), Gaps = 22/124 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L V+DSL LE L +Q++ +G++AL L
Sbjct: 5 HILVVEDSLTQAVKLEFFLFERGFQISLASNGERALGILA-------------------- 44
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E ++L+++D MPGM GY+L ++++ + +K VPV++++S + P + L+ GA F
Sbjct: 45 -EKDIDLVISDVIMPGMDGYELCEKIRENPQYKSVPVILLTSLSDPGDIIKGLKSGATNF 103
Query: 169 LLKP 172
+ KP
Sbjct: 104 VTKP 107
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 89/191 (46%), Gaps = 29/191 (15%)
Query: 42 QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
Q F +L V+D+ I+ K+ TC+ L+ +G + + N +
Sbjct: 572 QASDNSVFRILLVEDNPINVKV-----------ATCM------LKKMGHVIEVAGNGVEA 614
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW----KDVPVVVMSSENVPSRV 157
STLS + V+LI+ D MP M G++ + +++ KD+P++ MS+ +
Sbjct: 615 ISTLS----KLTVDLILMDLEMPEMDGFEASRNIRMGMAGEDKKDIPIIAMSAHAMAGVK 670
Query: 158 TMCLEEGAEEFLLKPVRLSDLEKLQPRLLK-SPNRSCGNNEDSDNDNKNETSNYKSSTNS 216
C + G ++ KPV+ +DL+++ LK S + S GN + N+ +E +S N
Sbjct: 671 DKCSKSGMNNYIAKPVQYADLKQVILATLKDSCSVSKGNKQ---NEVLDEIVLDRSKAND 727
Query: 217 AFSKRKALSAE 227
+ ++L E
Sbjct: 728 MYHGDESLYGE 738
>gi|390569425|ref|ZP_10249710.1| response regulator receiver protein [Burkholderia terrae BS001]
gi|420246638|ref|ZP_14750074.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Burkholderia sp. BT03]
gi|389938285|gb|EIN00129.1| response regulator receiver protein [Burkholderia terrae BS001]
gi|398073923|gb|EJL65082.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Burkholderia sp. BT03]
Length = 120
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 22/125 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+LA+DDS R+IL L + YQVT GD+ LE N+ + P
Sbjct: 4 HILAIDDSAAMRQILAATLTGAGYQVTLAADGDEGLE----------NALSMP------- 46
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+L++TD MPG TG DL+ L+ + +++D P++V+++E+ + GA +
Sbjct: 47 ----FDLVLTDQHMPGRTGLDLIAALRGNPAYRDTPILVLTTESGEPFKAAARDAGATGW 102
Query: 169 LLKPV 173
+ KP+
Sbjct: 103 IEKPL 107
>gi|357463135|ref|XP_003601849.1| Response regulator [Medicago truncatula]
gi|355490897|gb|AES72100.1| Response regulator [Medicago truncatula]
Length = 570
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P++ VL VDD KILE +L+ +Y+VT AL L
Sbjct: 9 PRRDFPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLL------------ 56
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMC 160
++ + +++++D MP M G+ LL+ + + D+PV++MS + SRV
Sbjct: 57 -------RERKDGYDIVISDVNMPDMDGFKLLEHVGLE--MDLPVIMMSVDGETSRVMKG 107
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRLLK 187
++ GA ++LLKP+R+ +L + + +
Sbjct: 108 VQHGACDYLLKPIRMKELRNIWQHVFR 134
>gi|115484281|ref|NP_001065802.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|108864015|gb|ABG22372.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|108864016|gb|ABG22373.1| CCT motif family protein, expressed [Oryza sativa Japonica Group]
gi|113644506|dbj|BAF27647.1| Os11g0157600 [Oryza sativa Japonica Group]
gi|125576282|gb|EAZ17504.1| hypothetical protein OsJ_33036 [Oryza sativa Japonica Group]
gi|213959178|gb|ACJ54923.1| CCT motif family protein [Oryza sativa Japonica Group]
gi|218185285|gb|EEC67712.1| hypothetical protein OsI_35190 [Oryza sativa Indica Group]
Length = 623
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 114 VNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKP 172
+L++T+ MP ++G +LL R+ S K++PV++MSS++ V C+++GA +FL+KP
Sbjct: 14 FDLVLTEVTMPTLSGIELLSRIVASDECKNIPVIMMSSQDSIGTVLRCMQKGAVDFLVKP 73
Query: 173 VRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSK 220
VR ++L L + + R N++ + ++N N SN+ S+ SK
Sbjct: 74 VRKNELRNLWQHVWR---RHAMNSQTNASEN-NAASNHLSANGGNGSK 117
>gi|312283277|dbj|BAJ34504.1| unnamed protein product [Thellungiella halophila]
Length = 668
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + + AL L +K
Sbjct: 37 VLVVDDDPTCLMILERMLRTCLYEVTKCNRAEMALSLL-------------------RKN 77
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS+++ S V + GA ++L+
Sbjct: 78 KHGFDIVISDVHMPDMDGFKLLEHVGLE--MDLPVIMMSADDSKSVVLKGVTHGAVDYLI 135
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ L+ + +++
Sbjct: 136 KPVRMEALKNIWQHVVR 152
>gi|218192572|gb|EEC74999.1| hypothetical protein OsI_11061 [Oryza sativa Indica Group]
Length = 780
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 27/182 (14%)
Query: 27 REGQLEDIPQQEKQPQQQQQ--------------------ETFHVLAVDDSLIDRKILEN 66
R G ED+P P + QQ +T VL V++ R+++
Sbjct: 39 RNGMGEDLPNGHSTPPEPQQTDEQKEHQVRIVRWERFLPVKTLRVLLVENDDSTRQVVSA 98
Query: 67 LLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGM 126
LLR Y+ + G A + + EN +A + ++ ++L++T+ MP +
Sbjct: 99 LLRKCCYEDS---RGFCASRFPSAVIPAENGLHA---WQCLEDLQNHIDLVLTEVVMPRL 152
Query: 127 TGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRL 185
+G LL ++ KD+PV++MSS + V CL +GA +FL+KP+R ++L+ L +
Sbjct: 153 SGIGLLSKITSHKICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQHV 212
Query: 186 LK 187
+
Sbjct: 213 WR 214
>gi|297824763|ref|XP_002880264.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
gi|297326103|gb|EFH56523.1| pseudo-response regulator 9 [Arabidopsis lyrata subsp. lyrata]
Length = 476
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 20/140 (14%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
VL V+ R+I+ LLR Y+V V G A E L K
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVL-------------------K 77
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++ ++LI+T+ +P ++G+ LL ++ + K++PV++MSS++ V C+ GA +
Sbjct: 78 EKSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAAD 137
Query: 168 FLLKPVRLSDLEKLQPRLLK 187
+L+KP+R ++L+ L + +
Sbjct: 138 YLIKPMRKNELKNLWQHVWR 157
>gi|224110806|ref|XP_002315642.1| type-b response regulator [Populus trichocarpa]
gi|222864682|gb|EEF01813.1| type-b response regulator [Populus trichocarpa]
Length = 250
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 69/137 (50%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +L+ SY+VT AL L ++
Sbjct: 12 VLVVDDDPTWLKILEKMLKRCSYEVTTCGLARDALNLL-------------------RER 52
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 53 KGGYDIVISDVYMPDMDGFKLLEHVGLEM--DLPVIMMSVDGETSRVMKGVQHGACDYLL 110
Query: 171 KPVRLSDLEKLQPRLLK 187
KP+R+ +L + + +
Sbjct: 111 KPIRMKELRNIWQHVFR 127
>gi|218886198|ref|YP_002435519.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218757152|gb|ACL08051.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 391
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 22/124 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD++ + +L +LL+ +Y+V +SG+KAL L S+ SP
Sbjct: 15 VLVVDDTVDNLTLLSDLLK-DTYRVKVANSGEKALRIL---------SSGSPP------- 57
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+L++ D MPGM GY +L+RLK + DVPV+ +++ + + LE GA +++
Sbjct: 58 ----DLVLLDIMMPGMDGYTVLRRLKELPGTADVPVIFLTALSEEDDERIGLELGAVDYI 113
Query: 170 LKPV 173
KP+
Sbjct: 114 TKPI 117
>gi|412992344|emb|CCO20057.1| type-b response regulator [Bathycoccus prasinos]
Length = 580
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 99/212 (46%), Gaps = 44/212 (20%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ++ KI+ +L+ Y VT S ALEYL TKKE
Sbjct: 14 VLVVDDDVLCLKIVTKMLQKCGYTVTSTTSSVTALEYL-----------------RTKKE 56
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
E +++++D MP M G+ LL+++ + D+PV++MS S V + GA ++LL
Sbjct: 57 E--FDIVLSDVHMPDMDGFKLLEQIALD--IDIPVLMMSVNADQSVVLRGIIHGAVDYLL 112
Query: 171 KPVRLSDLEKLQPRLLK-----------------------SPNRSCGNNEDSDNDNKNET 207
KPVR+ +L+ + +++ SP + G N S+ + N+
Sbjct: 113 KPVRIHELKNIWQHVVRKNGPDSLQRSGSMSMSPARSGRGSPEKDSGMNATSNGTHMNKK 172
Query: 208 SNYKSSTNSAFSKRKALSAEAPERRPKMKEVA 239
++ N+A S + +A+ ++ ++ VA
Sbjct: 173 LRTIAAANNAVSTDASAAAKGNKKPSTVEGVA 204
>gi|153004813|ref|YP_001379138.1| two component sigma54 specific Fis family transcriptional regulator
[Anaeromyxobacter sp. Fw109-5]
gi|152028386|gb|ABS26154.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter sp. Fw109-5]
Length = 470
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 68/132 (51%), Gaps = 22/132 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD + R++L +L+ Y+VT G++AL L
Sbjct: 3 HVLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVL--------------------- 41
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++ V++++TD MP + G +LL+R+ + + DVPV+++++ L+ GA +++
Sbjct: 42 HKTPVHVVVTDLVMPKVGGMELLRRVG-ADFPDVPVIMITAHGSVDSAVGALKAGAFDYI 100
Query: 170 LKPVRLSDLEKL 181
KP +L+K+
Sbjct: 101 TKPFEQDELKKV 112
>gi|21593727|gb|AAM65694.1| putative two-component response regulator protein [Arabidopsis
thaliana]
Length = 382
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 23/143 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD ILE +L YQVT D AL L ++
Sbjct: 13 ILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTIL-------------------RER 53
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +L+++D MPGM GY+LL+++ + D+PV++MS + + V + GA ++L+
Sbjct: 54 KDSFDLVLSDVHMPGMNGYNLLQQVGLLE-MDLPVIMMSVDGRTTTVMTGINHGACDYLI 112
Query: 171 KPVRLSDLEKLQPRLLKSPNRSC 193
KP+R +L+ + +++ R C
Sbjct: 113 KPIRPEELKNIWQHVVR---RKC 132
>gi|18407171|ref|NP_566085.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
gi|52783231|sp|Q8L500.2|APRR9_ARATH RecName: Full=Two-component response regulator-like APRR9; AltName:
Full=Pseudo-response regulator 9
gi|9247022|gb|AAF86253.1|AF272040_1 timing of CAB expression 1-like protein [Arabidopsis thaliana]
gi|10281000|dbj|BAB13741.1| pseudo-response regulator 9 [Arabidopsis thaliana]
gi|20197322|gb|AAC33497.2| expressed protein [Arabidopsis thaliana]
gi|62320652|dbj|BAD95319.1| hypothetical protein [Arabidopsis thaliana]
gi|330255660|gb|AEC10754.1| two-component response regulator-like APRR9 [Arabidopsis thaliana]
Length = 468
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 20/140 (14%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
VL V+ R+I+ LLR Y+V V G A E L K
Sbjct: 37 LRVLLVESDYSTRQIITALLRKCCYKVVAVSDGLAAWEVL-------------------K 77
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++ ++LI+T+ +P ++G+ LL ++ + K++PV++MSS++ V C+ GA +
Sbjct: 78 EKSHNIDLILTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAAD 137
Query: 168 FLLKPVRLSDLEKLQPRLLK 187
+L+KP+R ++L+ L + +
Sbjct: 138 YLIKPMRKNELKNLWQHVWR 157
>gi|15226345|ref|NP_178285.1| two-component response regulator ARR14 [Arabidopsis thaliana]
gi|50400550|sp|Q8L9Y3.2|ARR14_ARATH RecName: Full=Two-component response regulator ARR14
gi|4220473|gb|AAD12696.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|20466520|gb|AAM20577.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|22136418|gb|AAM91287.1| putative two-component response regulator protein [Arabidopsis
thaliana]
gi|330250401|gb|AEC05495.1| two-component response regulator ARR14 [Arabidopsis thaliana]
Length = 382
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 71/143 (49%), Gaps = 23/143 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD ILE +L YQVT D AL L ++
Sbjct: 13 ILVVDDDTSCLFILEKMLLRLMYQVTICSQADVALTIL-------------------RER 53
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +L+++D MPGM GY+LL+++ + D+PV++MS + + V + GA ++L+
Sbjct: 54 KDSFDLVLSDVHMPGMNGYNLLQQVGLLE-MDLPVIMMSVDGRTTTVMTGINHGACDYLI 112
Query: 171 KPVRLSDLEKLQPRLLKSPNRSC 193
KP+R +L+ + +++ R C
Sbjct: 113 KPIRPEELKNIWQHVVR---RKC 132
>gi|167630091|ref|YP_001680590.1| signal transduction histidine kinase [Heliobacterium modesticaldum
Ice1]
gi|167592831|gb|ABZ84579.1| signal transduction histidine kinase [Heliobacterium modesticaldum
Ice1]
Length = 567
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 22/130 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L VDD + +R I+ LR Y++ +G +AL L
Sbjct: 444 HILLVDDDVFNRTIIGAWLRRWGYRLREATNGKEALAVL--------------------- 482
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
EE R +LI+ D MPGM+G + + R++ + WK++PV+ +++ + L G ++
Sbjct: 483 EEERFDLILMDEQMPGMSGIETVDRIRADARWKNIPVIAVTANAMKGDRERFLAAGMNDY 542
Query: 169 LLKPVRLSDL 178
L KP +DL
Sbjct: 543 LSKPFSPADL 552
>gi|388504468|gb|AFK40300.1| unknown [Medicago truncatula]
Length = 570
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 21/147 (14%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P++ VL VDD KILE +L+ +Y+VT AL L
Sbjct: 9 PRRDFPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLL------------ 56
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMC 160
++ + +++++D MP M G+ LL + + D+PV++MS + SRV
Sbjct: 57 -------RERKDGYDIVISDVNMPDMDGFKLLGHVGLE--MDLPVIMMSVDGETSRVMKG 107
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRLLK 187
++ GA ++LLKP+R+ +L + + +
Sbjct: 108 VQHGACDYLLKPIRMKELRNIWQHVFR 134
>gi|168069753|ref|XP_001786566.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162660993|gb|EDQ48622.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 717
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 24/136 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ++ ++L NLL + Y++ +G +ALE + +
Sbjct: 402 VLMVDDDPVNLQVLRNLLALEGYRLMTASNGQEALEKI--------------------QS 441
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++L++ D+ MPGM+G DL + ++ S +P++++++ ++P V + L GA +FL
Sbjct: 442 GQSIDLVIADWMMPGMSGLDLCRSVRRQFSLSALPILLLTARSLPEDVRIGLSAGANDFL 501
Query: 170 LKPVRLSDLEKLQPRL 185
KPV D E+L+ R+
Sbjct: 502 RKPV---DAEELRARV 514
>gi|365901261|ref|ZP_09439112.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. STM 3843]
gi|365418028|emb|CCE11654.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Bradyrhizobium sp. STM 3843]
Length = 503
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ VD+GD +ID L P+ L+
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAIVVDTGDA------VIDKLTG-----PNALA---- 49
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ ++ D MPG+ G +L +++ + +PV+V ++ V + GA +F++
Sbjct: 50 ---IDALVLDLVMPGLDGMGVLAKMREAGLS-IPVIVQTAHGGIDNVVSAMRAGAHDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV LE+LQ L + N S E
Sbjct: 106 KPV---GLERLQVSLRNALNTSALQGE 129
>gi|325972397|ref|YP_004248588.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
gi|324027635|gb|ADY14394.1| response regulator receiver modulated metal dependent
phosphohydrolase [Sphaerochaeta globus str. Buddy]
Length = 341
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 65/127 (51%), Gaps = 20/127 (15%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T H++ DD RKIL+ +LR Y VT + G+ L+ L
Sbjct: 2 TRHIVTTDDDPAIRKILQIMLRKEGYMVTACEEGNGLLQLL------------------- 42
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++ E ++LI+ D MPG +G++LL+ ++ +S+ +P+V++++ N + GA +
Sbjct: 43 RQSEESIDLILLDIKMPGFSGFELLEMIR-ASYPQIPIVMITAFNDLDTGMKAMRMGASD 101
Query: 168 FLLKPVR 174
+L KPV
Sbjct: 102 YLAKPVH 108
>gi|118580778|ref|YP_902028.1| response regulator receiver modulated CheW protein [Pelobacter
propionicus DSM 2379]
gi|118503488|gb|ABK99970.1| response regulator receiver modulated CheW protein [Pelobacter
propionicus DSM 2379]
Length = 297
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 8 ECIPQQEKQQLLENIPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENL 67
E I + + +L N+ ER+ + + E + HVL VDDS +L++L
Sbjct: 143 ETILLLDIESILSNVVGIERDFSSVTVVEGEGAGR-------HVLIVDDSRAAIMLLQSL 195
Query: 68 LRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMT 127
L + + S DKALEYL +KE RV+LI++D MPGM
Sbjct: 196 LDRIGFSHIAMTSADKALEYL-------------------EKEHGRVDLIISDIEMPGMD 236
Query: 128 GYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLK 171
G+ + L+ + ++ + V++ SS + PS + + GA +F+ K
Sbjct: 237 GFTFTRTLREKAGYEHLKVILHSSMSNPSNILKAEQAGANKFVAK 281
>gi|303287506|ref|XP_003063042.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
gi|226455678|gb|EEH52981.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas pusilla CCMP1545]
Length = 544
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 72/137 (52%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD + +I+E +L+ Y+VT G +ALE TL +++
Sbjct: 17 VLVVDDDPLCLRIVEKMLKRCQYEVTTFSRGAEALE-----------------TLRARRD 59
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + DVPV++MS+ V + GA ++LL
Sbjct: 60 D--FDIVLSDVHMPDMDGFKLLEHIALE--LDVPVMMMSANCATDVVLRGIIHGAVDYLL 115
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVRL +L + +++
Sbjct: 116 KPVRLEELRNIWQHVVR 132
>gi|346226117|ref|ZP_08847259.1| putative two-component system sensor protein [Anaerophaga
thermohalophila DSM 12881]
Length = 1427
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 85/183 (46%), Gaps = 28/183 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L V+D+ +R++ LL +++ + V SG AL+ G K
Sbjct: 1175 LLMVEDNDTNRQVTVELLAMANIKTDVVASGQDALDLAG-----------------QHKG 1217
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ ++I+ D MPGM GY +R+K + W++VPVV M++E + + CL+ G +
Sbjct: 1218 KCPYDIILMDIHMPGMNGYTATRRIKRIEGWEEVPVVAMTAEALGDVESQCLQAGMTGLV 1277
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRKALSAEAP 229
KP+ DL ++ RL+ G EDS K T + K F K + L +A
Sbjct: 1278 GKPIDPDDLFRVIYRLV------FGEPEDS---GKTLTHSEKGR-EYKFPKIEGLDVQAG 1327
Query: 230 ERR 232
RR
Sbjct: 1328 IRR 1330
>gi|218194915|gb|EEC77342.1| hypothetical protein OsI_16022 [Oryza sativa Indica Group]
Length = 65
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 45/58 (77%), Gaps = 2/58 (3%)
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVT 158
P L+T E++ +++++TDYCMP MTGY+LLK +K +S K +PV+VMSSEN P R++
Sbjct: 8 PCELNTGVEQA-IDMVLTDYCMPEMTGYELLKAIKALSPLKPIPVIVMSSENEPQRIS 64
>gi|224064372|ref|XP_002301443.1| pseudo response regulator [Populus trichocarpa]
gi|222843169|gb|EEE80716.1| pseudo response regulator [Populus trichocarpa]
Length = 694
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 87/170 (51%), Gaps = 24/170 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR Y+V+ V G A E L K+
Sbjct: 48 LVEADDST--RQIIVALLRKCGYRVSAVPDGLMAWETL-------------------KER 86
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++LI+T+ +P ++GY L ++ K++PV++MSS + S V C+ +G+ +FL
Sbjct: 87 PHSIDLILTEVELPLISGYAFLALVMEHDVCKNIPVIMMSSHDSISVVLKCMLKGSADFL 146
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFS 219
+KPVR ++L L + + ++ G + N N+ E S+ ++ +S F+
Sbjct: 147 VKPVRKNELRNLWQHVWRRQTQTAG--KIPRNSNRVEASSENNAASSDFA 194
>gi|84570635|dbj|BAE72702.1| pseudo-response regulator 95 homologue [Lemna gibba]
Length = 460
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 99/209 (47%), Gaps = 30/209 (14%)
Query: 28 EGQLEDIPQQEKQPQQQQQETF------HVLAVDDSLIDRKILENLLRVSSYQVTCVDSG 81
EG+ I ++P+ + E F VL V+ RKI+ LLR Y+V+ G
Sbjct: 4 EGEEMRIDAAGEEPRVVKWEKFLPRMFLRVLLVEADDSTRKIVAALLRKCGYKVSSASDG 63
Query: 82 DKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRL-KVSSW 140
+A + L K++ + +L++T+ +P ++GY LL + + +
Sbjct: 64 LEAWKTL-------------------KEKPNDTDLVLTEVELPNVSGYALLSMMMEHETC 104
Query: 141 KDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNE--- 197
K +PV++MSS + V C+ +GA +FL+KP+R ++L L + + + + N
Sbjct: 105 KSIPVIMMSSNDSMKMVFECMLKGAADFLVKPIRKNELRNLWQHVWRRQSSNRAENVPPV 164
Query: 198 -DSDNDNKNETSNYKSSTNSAFSKRKALS 225
+ N N SN+ S + +KR+A S
Sbjct: 165 IGAANSEYNSASNHTSDCMDSNNKRRAGS 193
>gi|356556050|ref|XP_003546340.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 672
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 86/179 (48%), Gaps = 28/179 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + AL L ++
Sbjct: 31 VLVVDDDPTCLMILERMLRACLYEVTKCQRAEVALSLL-------------------REN 71
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS+++ V + GA ++L+
Sbjct: 72 KNGFDIVLSDVHMPDMDGFKLLEHIGLE--MDLPVIMMSADDGKHVVMKGVTHGACDYLI 129
Query: 171 KPVRLSDLEKLQPRLLKSPNRS------CGNNEDSDNDNK-NETSNYKSSTNSAFSKRK 222
KPVR+ L+ + +++ G+ E+ D K ++ +Y SS N A S +K
Sbjct: 130 KPVRIEALKNIWQHVIRKRKNGLRDVEQSGSVEEGDQPPKVSDDGDYSSSVNEARSSKK 188
>gi|356515054|ref|XP_003526216.1| PREDICTED: two-component response regulator ARR12-like [Glycine
max]
Length = 696
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD +LE LLR Y T + KAL L ++
Sbjct: 20 VLAVDDDPTCLLVLETLLRRCQYHATTTNQAIKALALL-------------------REH 60
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ + +L+++D MP M G+ LL+ + + D+PV+++S+ V + GA ++LL
Sbjct: 61 KDKFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSANGDTKLVMKGISHGACDYLL 118
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L+ + +++
Sbjct: 119 KPVRMEELKNIWQHVIR 135
>gi|220910102|ref|YP_002485413.1| cheA signal transduction histidine kinase [Cyanothece sp. PCC 7425]
gi|219866713|gb|ACL47052.1| CheA signal transduction histidine kinase [Cyanothece sp. PCC 7425]
Length = 941
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 20/129 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDDS+ R++LE +L YQVT G +ALE L +
Sbjct: 823 ILIVDDSIAVRRLLERVLTQGGYQVTACRDGKEALEEL-------------------NRS 863
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ + ++++D MP + GY LLK ++ W +PV +++S + S ++ GA +
Sbjct: 864 QGNIAMVISDIEMPRLDGYGLLKEIRTHPRWHRLPVAMLTSRSSDSHRQKAMDLGATTYF 923
Query: 170 LKPVRLSDL 178
KP + ++L
Sbjct: 924 TKPFQATEL 932
>gi|392968741|ref|ZP_10334157.1| multi-sensor hybrid histidine kinase [Fibrisoma limi BUZ 3]
gi|387843103|emb|CCH56211.1| multi-sensor hybrid histidine kinase [Fibrisoma limi BUZ 3]
Length = 943
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 21/160 (13%)
Query: 22 IPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSG 81
IP + +G+ + + + +Q +T +L V+D+ +++K+ ++L + ++G
Sbjct: 660 IPYKIAKGESDQLINKSISNWKQTGQTLRILVVEDNPMNQKLALSVLSRLGHSAQVAENG 719
Query: 82 DKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWK 141
+ ALE+L + S +LI+ D MP M GY + ++ +
Sbjct: 720 ELALEWL---------------------QRSTFDLILMDIQMPIMDGYTTTRHIRNTLHN 758
Query: 142 DVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKL 181
P++ M++ + S CL+ G +FL KP +DL++L
Sbjct: 759 KTPIIAMTAHALASEREQCLQAGMNDFLSKPFMPNDLQQL 798
>gi|297814420|ref|XP_002875093.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
gi|297320931|gb|EFH51352.1| hypothetical protein ARALYDRAFT_904389 [Arabidopsis lyrata subsp.
lyrata]
Length = 386
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 28/163 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD ILE +L YQVT D AL L ++
Sbjct: 13 ILLVDDDTSCLFILEKMLLRLMYQVTICSQADVALTIL-------------------RER 53
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +L+++D MPGM GY LL+++ + D+PV++MS + + V + GA ++L+
Sbjct: 54 KDSFDLVLSDVHMPGMNGYKLLQQVGLLEL-DLPVIMMSVDGRTTTVMTGINHGACDYLI 112
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDN-----DNKNETS 208
KP+R +L+ + +++ R C ++ N DNKN S
Sbjct: 113 KPIRPEELKNIWQHVVR---RKCVKKKELRNSQALEDNKNSGS 152
>gi|295699239|ref|YP_003607132.1| multi-sensor hybrid histidine kinase [Burkholderia sp. CCGE1002]
gi|295438452|gb|ADG17621.1| multi-sensor hybrid histidine kinase [Burkholderia sp. CCGE1002]
Length = 979
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 22/154 (14%)
Query: 38 EKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENN 97
E + + H+L VDD L +R++L L Y DSG AL
Sbjct: 736 ESKSTEIDTNAIHILVVDDQLANRELLVAQLATLGYDADMADSGGAALR----------- 784
Query: 98 SNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRV 157
+ E +L+MTD MPGM GY L + L+ VP++ +++
Sbjct: 785 ----------RFNERHYDLVMTDINMPGMDGYALARCLRAQG-ATVPIIAITAHVAAEVR 833
Query: 158 TMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNR 191
C G +E LLKPV L ++ + R++ R
Sbjct: 834 AQCTNAGIDEVLLKPVLLDTMDAMVRRVVDEAAR 867
>gi|168010903|ref|XP_001758143.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690599|gb|EDQ76965.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 239
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 21/128 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD + I+E +L++ Y VT +S KAL L ++
Sbjct: 6 VLVVDDEPLALMIVERMLQICQYTVTTCNSATKALAML-------------------REN 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +L+++D MP M G+ LL+ + + D+PV++MS + V + GA ++LL
Sbjct: 47 RNYFDLVISDVYMPDMDGFKLLEAIGLEL--DLPVIMMSGDGETDSVMKGIRHGACDYLL 104
Query: 171 KPVRLSDL 178
KPVRL +L
Sbjct: 105 KPVRLKEL 112
>gi|428221705|ref|YP_007105875.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 7502]
gi|427995045|gb|AFY73740.1| serine phosphatase RsbU, regulator of sigma subunit [Synechococcus
sp. PCC 7502]
Length = 595
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 70/145 (48%), Gaps = 30/145 (20%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
+ +T H+L VDD+ +R + L+ Y VT +G +AL +
Sbjct: 180 ENQTCHLLVVDDNENNRDLFTRQLQREGYIVTTATNGQEAL-----------------TM 222
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEE 163
+ T + E L++ D MP + GY LK LK W+ +PV+++S+ + +V C+E
Sbjct: 223 IKTGEYE----LVLLDLMMPILDGYQALKMLKADEQWQHIPVIMISASDEIDQVVRCIEI 278
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKS 188
GAE+FL KP P LLK+
Sbjct: 279 GAEDFLPKP--------FNPILLKA 295
>gi|313184318|emb|CBL94183.1| putative type-b response regulator (sensor histidine kinase) [Malus
x domestica]
Length = 674
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 86/172 (50%), Gaps = 28/172 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + + AL L ++
Sbjct: 35 VLVVDDDPTCLMILERMLRTCLYEVTKCNRAEIALSLL-------------------REN 75
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+++ + D+PV++MS+++ S V + GA ++L+
Sbjct: 76 KNGFDIVISDVHMPDMDGFKLLEQVGLE--MDLPVIMMSADDGQSVVMKGVTHGACDYLI 133
Query: 171 KPVRLSDLEKLQPRLLKSPNR------SCGNNEDSDNDNK-NETSNYKSSTN 215
KPVR+ L+ + +++ G+ E+ D K +E ++Y SS N
Sbjct: 134 KPVRIEALKNIWQHVVRKKKNEWKDVEQSGSVEEGDRQQKPSEDADYSSSAN 185
>gi|374308407|ref|YP_005054838.1| DNA-binding response regulator [Filifactor alocis ATCC 35896]
gi|291166732|gb|EFE28778.1| DNA-binding response regulator [Filifactor alocis ATCC 35896]
Length = 228
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 75/150 (50%), Gaps = 23/150 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L VDD R ++ L+ Y+VT D+ DKA E+ L+NN
Sbjct: 3 HILIVDDEKRIRDLIVMYLKKEGYEVTDFDNADKAYEF------LQNNE----------- 45
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
V+L++ D M GM G DL K+++++S +VP++ +S+ + + LE GA+++L
Sbjct: 46 ----VDLLVLDIMMRGMNGLDLCKKVRMTS--EVPIIFVSARSEELDRILGLELGADDYL 99
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDS 199
KP + +L +L+ N ED+
Sbjct: 100 AKPFSVRELVVRIKNILRRTNAVVQKKEDN 129
>gi|328952068|ref|YP_004369402.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
gi|328452392|gb|AEB08221.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfobacca acetoxidans DSM 11109]
Length = 455
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 85/167 (50%), Gaps = 27/167 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD ++E LL + Y+V DSG+ ALE T++
Sbjct: 4 ILVVDDEKNYLLVMETLLAGAGYEVFTADSGETALEL-------------------TRRN 44
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ ++L++TD MP M+G +LL++LK + D+PV++M++ + +++GA +++L
Sbjct: 45 D--LDLVVTDMKMPRMSGIELLEQLK-QVYPDLPVIMMTAYGTVEKAVEAMKKGAFDYIL 101
Query: 171 KPVR-----LSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKS 212
KP + L+ + L+ R L + NR ++ + + N N K+
Sbjct: 102 KPFKNEEILLTIAKALELRHLLTENRRLRHDLEQRHRFDNIVGNSKA 148
>gi|302788023|ref|XP_002975781.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
gi|300156782|gb|EFJ23410.1| hypothetical protein SELMODRAFT_150746 [Selaginella moellendorffii]
Length = 660
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y VT AL L ++
Sbjct: 3 VLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALL-------------------REH 43
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV++MS++ + V + GA ++LL
Sbjct: 44 KNDFDLVISDVYMPDMDGFKLLELVGLE--MDLPVIMMSTDGDYNNVMKGITHGACDYLL 101
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L + L++
Sbjct: 102 KPVRMEELRNIWQHLVR 118
>gi|220907975|ref|YP_002483286.1| response regulator receiver sensor signal transduction histidine
kinase [Cyanothece sp. PCC 7425]
gi|219864586|gb|ACL44925.1| response regulator receiver sensor signal transduction histidine
kinase [Cyanothece sp. PCC 7425]
Length = 381
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 23/130 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L VDDS + +++ +L Y+V+ G ALE + NA P
Sbjct: 14 HILVVDDSADNLFLIQTILESEGYEVSTATHGKAALEQV---------VNAPP------- 57
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+L++ D MPGM GY++ +R++++ S +P++++++ + P RV L+ GA++F
Sbjct: 58 -----DLVLLDVMMPGMNGYEVTRRIRLNKSLPFMPILLITAHDRP-RVAEGLDLGADDF 111
Query: 169 LLKPVRLSDL 178
+ KPV +L
Sbjct: 112 IRKPVEYDEL 121
>gi|302770951|ref|XP_002968894.1| type B response regulator [Selaginella moellendorffii]
gi|300163399|gb|EFJ30010.1| type B response regulator [Selaginella moellendorffii]
Length = 602
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 34 IPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDN 93
I E+ Q VL VDD IL+ +L +Y VT AL L
Sbjct: 3 IQASERDMGDQFPAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAML----- 57
Query: 94 LENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENV 153
++ + R +++++D CMP M G+ LL+ + + D+PV++MS+
Sbjct: 58 --------------RENKERFDVVLSDVCMPDMDGFKLLELVGLE--MDLPVIMMSANGE 101
Query: 154 PSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDND 202
S V + GA ++LLKP+R+ +L+ + + + + + +D+D
Sbjct: 102 TSLVMKGIIHGACDYLLKPIRIKELKNIWQHVFRRKRNILKDADGADHD 150
>gi|302783917|ref|XP_002973731.1| type B response regulator [Selaginella moellendorffii]
gi|300158769|gb|EFJ25391.1| type B response regulator [Selaginella moellendorffii]
Length = 705
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y VT AL L ++
Sbjct: 37 VLVVDDDQTTLTILEAMLRRCRYNVTTCGKATTALALL-------------------REH 77
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +L+++D MP M G+ LL+ + + D+PV++MS++ + V + GA ++LL
Sbjct: 78 KNDFDLVISDVYMPDMDGFKLLELVGLE--MDLPVIMMSTDGDYNNVMKGITHGACDYLL 135
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L + L++
Sbjct: 136 KPVRMEELRNIWQHLVR 152
>gi|398797682|ref|ZP_10557002.1| signal transduction histidine kinase [Pantoea sp. GM01]
gi|398102408|gb|EJL92589.1| signal transduction histidine kinase [Pantoea sp. GM01]
Length = 1195
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 70/147 (47%), Gaps = 28/147 (19%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
+ + HVL VDD +R +L L + +QV +SG++ALE L +S +
Sbjct: 956 ERSMHVLIVDDHSPNRLLLTQQLEMMGHQVIAAESGEQALEIL--------HSGVA---- 1003
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWK------DVPVVVMSSENVPSRVTM 159
++LI TD MPGM G++L + ++ W+ P++ +++ S V
Sbjct: 1004 --------IDLITTDVTMPGMDGFELTRHIR--QWELQHNIASKPILGLTAHAQSSVVDK 1053
Query: 160 CLEEGAEEFLLKPVRLSDLEKLQPRLL 186
C E G E L KPVR + L RL+
Sbjct: 1054 CREAGMNECLFKPVRSAQLHDAVNRLM 1080
>gi|357137423|ref|XP_003570300.1| PREDICTED: two-component response regulator ARR12-like
[Brachypodium distachyon]
Length = 671
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD + K+LE LLR Y VT + AL L ++
Sbjct: 23 VLAVDDDPVCLKVLETLLRRCQYHVTATNQAVIALRML-------------------REN 63
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+L+++D MP M G+ LL+ + + D+PV+++S V + GA ++LL
Sbjct: 64 RDMFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSGNGETKTVMKGITHGACDYLL 121
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L + +++
Sbjct: 122 KPVRIEELRNIWQHVVR 138
>gi|284041387|ref|YP_003391317.1| multi-sensor hybrid histidine kinase [Spirosoma linguale DSM 74]
gi|283820680|gb|ADB42518.1| multi-sensor hybrid histidine kinase [Spirosoma linguale DSM 74]
Length = 863
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 73/151 (48%), Gaps = 28/151 (18%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
Q VL V+D+L+++K++ +L+ YQ D G KA++ L
Sbjct: 606 QRVVRVLVVEDNLMNQKLVLQVLKHLGYQGQVADDGRKAIDIL----------------- 648
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGA 165
++ ++I+ D MP M GY+ + ++ VP++ M++ +PS CL+ G
Sbjct: 649 ----QKDTFDIILMDLQMPVMDGYETTRYIRSKINTTVPIIAMTAHALPSEKEECLKAGM 704
Query: 166 EEFLLKPVRLSDLEKL-------QPRLLKSP 189
+FL KP ++ +L+ L + LLK+P
Sbjct: 705 NDFLSKPFQIEELQLLIRPFLPTENSLLKTP 735
>gi|224132554|ref|XP_002321349.1| pseudo response regulator [Populus trichocarpa]
gi|222868345|gb|EEF05476.1| pseudo response regulator [Populus trichocarpa]
Length = 687
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 76/152 (50%), Gaps = 23/152 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQ-VTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
++ DDS R+I+ LLR SY+ V V G KA E L K+
Sbjct: 69 LVEADDST--RQIIAALLRKCSYKAVATVSDGLKAWEIL-------------------KE 107
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
++LI+T+ +P ++GY LL ++ K++PV++MSS++ V C+ GA ++
Sbjct: 108 RPHNIDLILTEVDLPSVSGYALLTLIMEHEICKNIPVIMMSSQDSIKTVYKCMLRGAADY 167
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD 200
L+KP+R ++L L + + + G N D
Sbjct: 168 LVKPIRKNELRNLWQHVWRKQSSLGGGNGPHD 199
>gi|374603703|ref|ZP_09676679.1| two-component hybrid sensor and regulator [Paenibacillus
dendritiformis C454]
gi|374390674|gb|EHQ62020.1| two-component hybrid sensor and regulator [Paenibacillus
dendritiformis C454]
Length = 995
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/146 (26%), Positives = 71/146 (48%), Gaps = 25/146 (17%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P Q H+LAVDD ++ +L +L Y +T V S + LE LG
Sbjct: 659 PPLLQDGNIHILAVDDDPVNLNVLVGILSTEPYTITTVQSAREVLELLG----------- 707
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTM 159
+ +L++ D MP M+GY+L +R++ S ++P++++++ + P+ +
Sbjct: 708 ----------TQQWDLLIADVMMPHMSGYELTQRVREHYSVSELPILLLTARSQPADIYT 757
Query: 160 CLEEGAEEFLLKPVRLSDLEKLQPRL 185
GA +++ KPV D +L+ R+
Sbjct: 758 GFSAGANDYVTKPV---DALELKSRI 780
>gi|356521815|ref|XP_003529546.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 679
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 28/172 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + + AL L ++
Sbjct: 35 VLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLL-------------------REN 75
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS+++ S V + GA ++L+
Sbjct: 76 KNGFDIVISDVHMPDMDGFKLLEHIGLE--MDLPVIMMSADDGKSVVMKGVTHGACDYLI 133
Query: 171 KPVRLSDLEKLQPRLLKSPNR------SCGNNEDSDNDNK-NETSNYKSSTN 215
KPVR+ L+ + +++ G+ E+ D K ++ ++Y SS N
Sbjct: 134 KPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRQPKASDEADYSSSAN 185
>gi|145514149|ref|XP_001442985.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124410346|emb|CAK75588.1| unnamed protein product [Paramecium tetraurelia]
Length = 838
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
K E+ +LI+ D MP M G DLLK +K + K+ PV++MS + V CL GA
Sbjct: 66 KGENEFDLILLDLLMPEMGGLDLLKIIKSIDKLKETPVIMMSGDGETDIVAACLGAGALN 125
Query: 168 FLLKPVRLSDLEKLQPRLLKSP-NRSCGNNEDSDNDNKNETSNY 210
+L+KPV + LQ + K P NR+ S +N NE Y
Sbjct: 126 YLVKPVNFKQFQSLQELVKKKPKNRNVIYY--SKQNNSNEKGFY 167
>gi|356564542|ref|XP_003550512.1| PREDICTED: two-component response regulator ARR2-like [Glycine max]
Length = 677
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 85/172 (49%), Gaps = 28/172 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +LR Y+VT + + AL L ++
Sbjct: 35 VLVVDDDPTCLMILEKMLRTCLYEVTKCNRAETALSLL-------------------REN 75
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS+++ S V + GA ++L+
Sbjct: 76 KNGFDIVISDVHMPDMDGFKLLEHIGLE--MDLPVIMMSADDGKSVVMKGVTHGACDYLI 133
Query: 171 KPVRLSDLEKLQPRLLKSPNR------SCGNNEDSDNDNK-NETSNYKSSTN 215
KPVR+ L+ + +++ G+ E+ D K ++ ++Y SS N
Sbjct: 134 KPVRIEALKNIWQHVVRKRKNEWKDAEQSGSAEEGDRHPKASDEADYSSSAN 185
>gi|242092234|ref|XP_002436607.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
gi|241914830|gb|EER87974.1| hypothetical protein SORBIDRAFT_10g005580 [Sorghum bicolor]
Length = 659
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD + K+LE LLR Y VT + AL+ L ++
Sbjct: 22 VLAVDDDPVCLKVLETLLRRCQYHVTTTNQAITALKML-------------------REN 62
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+L+++D MP M G+ LL+ + + D+PV+++S V + GA ++LL
Sbjct: 63 RDTYDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSVNGETKSVMKGITHGACDYLL 120
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L + +++
Sbjct: 121 KPVRIEELRNIWQHVVR 137
>gi|302784610|ref|XP_002974077.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
gi|300158409|gb|EFJ25032.1| hypothetical protein SELMODRAFT_173793 [Selaginella moellendorffii]
Length = 607
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 77/169 (45%), Gaps = 21/169 (12%)
Query: 34 IPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDN 93
I E+ Q VL VDD IL+ +L +Y VT AL L
Sbjct: 3 IQASERDMGDQFPAGLRVLVVDDDRTCLAILKKMLLRCAYDVTTCGMARLALAML----- 57
Query: 94 LENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENV 153
++ + R +++++D CMP M G+ LL+ + + D+PV++MS+
Sbjct: 58 --------------RENKERFDVVLSDVCMPDMDGFKLLELVGLE--MDLPVIMMSANGE 101
Query: 154 PSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDND 202
S V + GA ++LLKP+R+ +L+ + + + + + +D+D
Sbjct: 102 TSLVMKGIIHGACDYLLKPIRIKELKNIWQHVFRRKRNILKDADGADHD 150
>gi|295108821|emb|CBL22774.1| diguanylate cyclase (GGDEF) domain [Ruminococcus obeum A2-162]
Length = 710
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 74/150 (49%), Gaps = 30/150 (20%)
Query: 34 IPQQEKQPQQQQQET---------FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKA 84
+ + ++Q ++QQ+ + +L VDDS ++R+IL +L Y + DSGD
Sbjct: 284 VTEHDEQLKEQQESANNNGSKAYKYRILVVDDSEMNREILSEILN-EEYDIIEADSGDTC 342
Query: 85 LEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDV 143
++ L +K E+ ++L++ D MPGM G+ +L + + +D+
Sbjct: 343 IDML-------------------RKYETGISLVLLDIVMPGMDGFGVLNYMNHHHYLEDI 383
Query: 144 PVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
PV+++SSE+ V E G +++ +P
Sbjct: 384 PVIMISSEDSTETVRRAYEMGVSDYINRPF 413
>gi|229590586|ref|YP_002872705.1| putative sensory box GGDEF/EAL domain-containing protein
[Pseudomonas fluorescens SBW25]
gi|229362452|emb|CAY49358.1| putative sensory box GGDEF/EAL domain protein [Pseudomonas
fluorescens SBW25]
Length = 409
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 29/142 (20%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD RK+LE LL+ YQ SG++AL+ + + P
Sbjct: 8 LLIVDDEPQVRKLLETLLQHEGYQTLTAGSGEEALQLV---------AQQPP-------- 50
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+LI+ D MPGM GY++ +LK + +P++++S+ + PS LE GAEEF+
Sbjct: 51 ----DLILLDIMMPGMDGYEVASQLKGDETTAGIPIIMLSALSEPSARVNGLEAGAEEFI 106
Query: 170 LKPV-------RLSDLEKLQPR 184
KPV R+ +L +L+ R
Sbjct: 107 SKPVERVELWLRVRNLLRLKTR 128
>gi|56752288|ref|YP_172989.1| two-component response regulator [Synechococcus elongatus PCC 6301]
gi|56687247|dbj|BAD80469.1| two-component response regulator [Synechococcus elongatus PCC 6301]
Length = 411
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 30/170 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L +D+ I+R +LE LR + V CV SG +AL L
Sbjct: 175 LLVAEDNEINRDVLERRLRRLGHDVVCVASGQEALNQLA--------------------- 213
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +L+ D MPG+TG+++L++LK + ++PV+++S+ + V CL GA ++L
Sbjct: 214 QQPFDLLFLDLMMPGLTGFEVLQQLKADPTLAELPVLMISALDDLESVIRCLRLGATDYL 273
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFS 219
KP +P LL++ +C ++ + + N T++A +
Sbjct: 274 TKP--------FEPTLLQTRLETCLQHKRLRDRELDYLRNVAIVTDAAVA 315
>gi|456352867|dbj|BAM87312.1| putative response regulator in two-component regulatory system,
sigma 54-dependent [Agromonas oligotrophica S58]
Length = 497
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 72/147 (48%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y+ V++GD +E L + +A P
Sbjct: 5 ILIADDDPVQRRLVENMVQKCGYEAVVVETGDAVIEKL-------THPDAGP-------- 49
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ I+ D MPG+ G +L +++ +PV+V ++ V + GA++F++
Sbjct: 50 ---IDAIVLDLVMPGLDGMGVLSKMR-EMGISIPVIVQTAHGGIDNVVSAMRAGAQDFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GIERLQVSLRNALNTSALKGE 129
>gi|159485404|ref|XP_001700734.1| hypothetical protein CHLREDRAFT_113139 [Chlamydomonas reinhardtii]
gi|158281233|gb|EDP06988.1| predicted protein, partial [Chlamydomonas reinhardtii]
Length = 235
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 21/133 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+L VDD + K++E +LR SY+VT + AL L +
Sbjct: 5 LRLLVVDDDPLCLKVVEQMLRKCSYEVTVCSNATTALNIL-------------------R 45
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+ + +L+++D MP M G+ LL+ + + D+PV++MSS S V + GA ++
Sbjct: 46 DKNTEYDLVLSDVYMPDMDGFRLLELVGLEM--DLPVIMMSSNGDTSNVLRGVTHGACDY 103
Query: 169 LLKPVRLSDLEKL 181
L+KPVRL +L L
Sbjct: 104 LIKPVRLEELRNL 116
>gi|186477721|ref|YP_001859191.1| response regulator receiver protein [Burkholderia phymatum STM815]
gi|184194180|gb|ACC72145.1| response regulator receiver protein [Burkholderia phymatum STM815]
Length = 120
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 22/125 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+LA+DDS R+IL L + YQVT G++ LE N+ A P
Sbjct: 4 HILAIDDSAAMRQILAATLTGAGYQVTLAADGNEGLE----------NALAMP------- 46
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+L++TD MPG +G DL+ L+ + S++D P++V+++E+ + GA +
Sbjct: 47 ----FDLVLTDQHMPGRSGLDLIAALRGNPSYRDTPILVLTTESGEPFKAAARDAGATGW 102
Query: 169 LLKPV 173
+ KP+
Sbjct: 103 IEKPL 107
>gi|81300624|ref|YP_400832.1| response regulator receiver domain-containing protein
[Synechococcus elongatus PCC 7942]
gi|81169505|gb|ABB57845.1| response regulator receiver domain protein (CheY-like)
[Synechococcus elongatus PCC 7942]
Length = 411
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 81/170 (47%), Gaps = 30/170 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L +D+ I+R +LE LR + V CV SG +AL L
Sbjct: 175 LLVAEDNEINRDVLERRLRRLGHDVVCVASGQEALNQLA--------------------- 213
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +L+ D MPG+TG+++L++LK + ++PV+++S+ + V CL GA ++L
Sbjct: 214 QQPFDLLFLDVMMPGLTGFEVLQQLKADPTLAELPVLMISALDDLESVIRCLRLGATDYL 273
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFS 219
KP +P LL++ +C ++ + + N T++A +
Sbjct: 274 TKP--------FEPTLLQTRLETCLQHKRLRDRELDYLRNVAIVTDAAVA 315
>gi|413963848|ref|ZP_11403075.1| response regulator receiver domain-containing protein [Burkholderia
sp. SJ98]
gi|413929680|gb|EKS68968.1| response regulator receiver domain-containing protein [Burkholderia
sp. SJ98]
Length = 125
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+LA+DDS R+IL L + YQVT GD+ LE+
Sbjct: 4 HILAIDDSAAMRQILSATLAAAGYQVTVASDGDEGLEW---------------------A 42
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
R +L++TD MPG +G DL+ L+ + ++K P++V+++E GA +
Sbjct: 43 LAERFDLVLTDQHMPGRSGLDLIVALRGNPAYKATPILVLTTEGGEPFKDAARSAGATGW 102
Query: 169 LLKPV 173
+ KP+
Sbjct: 103 IEKPL 107
>gi|396461515|ref|XP_003835369.1| hypothetical protein LEMA_P047100.1 [Leptosphaeria maculans JN3]
gi|312211920|emb|CBX92004.1| hypothetical protein LEMA_P047100.1 [Leptosphaeria maculans JN3]
Length = 934
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 40/151 (26%), Positives = 68/151 (45%), Gaps = 23/151 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L V+D+ I+RK++ L+ Y VT V G +AL+Y L T
Sbjct: 801 HILLVEDNPINRKVISLALQKLGYIVTAVCDGQQALDY-----------------LCTSS 843
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKV------SSWKDVPVVVMSSENVPSRVTMCLEE 163
+ ++ D MP + GY +R++ S + +P++ +++ + C E
Sbjct: 844 PHPPPHALLMDCMMPNVDGYQATRRIRTDETLFSESVRRLPIIALTASAIKGDREKCFEA 903
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKSPNRSCG 194
G ++FL KP DL++ R L R CG
Sbjct: 904 GFDDFLTKPAARDDLKRTLLRWLGGGRRGCG 934
>gi|400595315|gb|EJP63120.1| putative histidine kinase HHK6p [Beauveria bassiana ARSEF 2860]
Length = 1379
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 75/165 (45%), Gaps = 27/165 (16%)
Query: 32 EDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI 91
+D+P+ E+ FH+L V+D+ +++KI +R +QVT +G +ALEY +
Sbjct: 1094 QDLPRSERA-------AFHILVVEDNAVNQKIATRTIRKLGFQVTAAWNGREALEY---V 1143
Query: 92 DNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-----WKDVPVV 146
N P ++I+ D MP + GY ++ +VP+V
Sbjct: 1144 LGASEGRNVKP------------DIILMDVQMPIIDGYKCTHLMRHHRPYKGLIHNVPIV 1191
Query: 147 VMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNR 191
M++ + C G +++L KPV +S LE++ R S R
Sbjct: 1192 AMTASAIQGDREKCKRAGMDDYLAKPVTMSILERMLIRWCVSRRR 1236
>gi|378828198|ref|YP_005190930.1| putative adenylate/guanylate cyclase [Sinorhizobium fredii HH103]
gi|365181250|emb|CCE98105.1| putative adenylate/guanylate cyclase [Sinorhizobium fredii HH103]
Length = 520
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 82/179 (45%), Gaps = 33/179 (18%)
Query: 2 ELKPQVECIPQQEKQQLLENIPQQEREG----QLEDI---PQQEKQPQQQQQETFHVLAV 54
EL QVE I +E + +++ G +LE + +Q+ P Q + +L V
Sbjct: 129 ELLKQVEAIAGLSHGGAIEALQPRDQGGLDAAELERVLFRTEQDAWPDQGGR----ILVV 184
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DD +R +L LR ++V DSG AL L E
Sbjct: 185 DDVASNRDLLSRRLRREGHRVVTADSGLSALARL---------------------TEQEF 223
Query: 115 NLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKP 172
+L++ D MP M G ++L RLK W+ VPV+++S N + V C+E GA+E+L KP
Sbjct: 224 DLLLLDILMPDMNGIEVLSRLKADDRWRHVPVIMISGLNEVAAVARCIEAGADEYLTKP 282
>gi|147787458|emb|CAN60088.1| hypothetical protein VITISV_005486 [Vitis vinifera]
Length = 706
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 82/155 (52%), Gaps = 8/155 (5%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD +L+ LLR YQ + + L Y+ N +N + + L +E
Sbjct: 26 VLAVDDDPTCLMLLDGLLRRCQYQGLVLLCFARLLLYM----NFVTTTNQAITALKMLRE 81
Query: 111 -ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++ +L+++D MP M G+ LL+ + + D+PV+++SS + V + GA ++L
Sbjct: 82 NKNNFDLVISDVSMPDMDGFKLLELVGLE--MDLPVIMLSSHSDQKLVMRGITHGACDYL 139
Query: 170 LKPVRLSDLEKLQPRLLKSPN-RSCGNNEDSDNDN 203
LKPVR+ +L+ + +++ S N+ +D DN
Sbjct: 140 LKPVRIEELKNIWQHVIRRKKIDSKDQNKSADQDN 174
>gi|410593829|ref|YP_006950556.1| Heme response regulator hssR [Streptococcus agalactiae SA20-06]
gi|421532302|ref|ZP_15978667.1| DNA-binding response regulator [Streptococcus agalactiae
STIR-CD-17]
gi|403642475|gb|EJZ03317.1| DNA-binding response regulator [Streptococcus agalactiae
STIR-CD-17]
gi|410517468|gb|AFV71612.1| Heme response regulator hssR [Streptococcus agalactiae SA20-06]
Length = 164
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 22/156 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L V+D+++ +KI+ L YQ +G +AL L +
Sbjct: 4 ILVVEDNIVQQKIITTKLTQEGYQFITASNGQEALNCL---------------------D 42
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
V LI+TD MP M GY L++ L+ +++ +VP++VM++++ +T GA+++++
Sbjct: 43 TEEVQLIITDIMMPMMDGYQLIQELRSAAY-NVPIIVMTAKSQMEDMTKGFGLGADDYMV 101
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNE 206
KPV+L +L LL+ N + N NE
Sbjct: 102 KPVQLQELALRIKALLRRANIVAQHQLIIGNTCLNE 137
>gi|295688045|ref|YP_003591738.1| Fis family transcriptional regulator [Caulobacter segnis ATCC
21756]
gi|295429948|gb|ADG09120.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Caulobacter segnis ATCC 21756]
Length = 486
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 62/122 (50%), Gaps = 21/122 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD R++++ +L + V+ DSGD A+ +L ++ +P+
Sbjct: 5 VLVVDDDPTQRRLIQAVLERDGFAVSHADSGDAAIAHL---------TSGAPA------- 48
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++++ D MPG++G D LK ++ + PV+V+++ V ++ GA +F +
Sbjct: 49 ----DVVLLDLVMPGLSGQDALKEMRARGFSQ-PVIVLTASGGVDTVVKAMQAGASDFFI 103
Query: 171 KP 172
KP
Sbjct: 104 KP 105
>gi|115480333|ref|NP_001063760.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|68565887|sp|Q689G6.1|PRR95_ORYSJ RecName: Full=Two-component response regulator-like PRR95; AltName:
Full=Pseudo-response regulator 95; Short=OsPRR95
gi|51571881|dbj|BAD38857.1| pseudo-response regulator 95 [Oryza sativa Japonica Group]
gi|52075943|dbj|BAD46023.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|52077226|dbj|BAD46270.1| peudo-response regulator-like [Oryza sativa Japonica Group]
gi|113631993|dbj|BAF25674.1| Os09g0532400 [Oryza sativa Japonica Group]
gi|215695172|dbj|BAG90363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695375|dbj|BAG90566.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641971|gb|EEE70103.1| hypothetical protein OsJ_30112 [Oryza sativa Japonica Group]
Length = 623
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 22/134 (16%)
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DDS R I+ LLR Y+V G KA + L K++ +
Sbjct: 51 DDST--RHIICALLRKCGYRVAAASDGVKAWDIL-------------------KEKSFNI 89
Query: 115 NLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+L++T+ +P M+G+ LL ++ + K++PV++MSS + S V C+ +GA +FL+KP+
Sbjct: 90 DLVLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPI 149
Query: 174 RLSDLEKLQPRLLK 187
R ++L L + +
Sbjct: 150 RKNELRNLWQHVWR 163
>gi|15966548|ref|NP_386901.1| sigma-54-dependent transcription regulator protein [Sinorhizobium
meliloti 1021]
gi|334317552|ref|YP_004550171.1| Fis family two component sigma-54 specific transcriptional
regulator [Sinorhizobium meliloti AK83]
gi|384530678|ref|YP_005714766.1| two component Fis family sigma54-specific transcriptional regulator
[Sinorhizobium meliloti BL225C]
gi|407721862|ref|YP_006841524.1| sigma-54-dependent transcription regulator protein [Sinorhizobium
meliloti Rm41]
gi|418402283|ref|ZP_12975798.1| Fis family two component sigma-54 specific transcriptional
regulator [Sinorhizobium meliloti CCNWSX0020]
gi|433614626|ref|YP_007191424.1| Response regulator containing CheY-like receiver, AAA-type ATPase,
and DNA-binding domains [Sinorhizobium meliloti GR4]
gi|15075819|emb|CAC47374.1| Putative sigma-54-dependent transcription regulator [Sinorhizobium
meliloti 1021]
gi|333812854|gb|AEG05523.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Sinorhizobium meliloti BL225C]
gi|334096546|gb|AEG54557.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Sinorhizobium meliloti AK83]
gi|359503731|gb|EHK76278.1| Fis family two component sigma-54 specific transcriptional
regulator [Sinorhizobium meliloti CCNWSX0020]
gi|407320094|emb|CCM68698.1| sigma-54-dependent transcription regulator protein [Sinorhizobium
meliloti Rm41]
gi|429552816|gb|AGA07825.1| Response regulator containing CheY-like receiver, AAA-type ATPase,
and DNA-binding domains [Sinorhizobium meliloti GR4]
Length = 513
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 20/126 (15%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T H+L +DD + R++L N++ + D+G LE L
Sbjct: 2 TSHILVIDDDPVQRRLLTNMIERLGHVAHLADNGRSGLELL------------------- 42
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+++ +N+I+ D MP M G+ LL+ L D+PV+V + + V ++ GA +
Sbjct: 43 QRKGGIINVILLDLLMPEMNGHGLLEAL-AERGIDIPVIVQTGQGGIETVVQAMQAGAFD 101
Query: 168 FLLKPV 173
FL+KPV
Sbjct: 102 FLVKPV 107
>gi|451817230|ref|YP_007453431.1| signal-transduction histidine kinase SenX3 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451783209|gb|AGF54177.1| signal-transduction histidine kinase SenX3 [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 368
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 66/123 (53%), Gaps = 22/123 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD+L + +I+ N+L + Y++ V+SG +A I L NN
Sbjct: 8 ILIVDDALFNIRIVTNILEHAGYEIHSVNSGIRA------IIELRNN------------- 48
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +LI+ D MP M GY + K LK + + KD+P++ +++ + V L++GA +F+
Sbjct: 49 --KYDLILLDVVMPEMDGYKVNKVLKQNKNTKDIPIIFLTARGDSNSVVKALDDGAVDFI 106
Query: 170 LKP 172
KP
Sbjct: 107 TKP 109
>gi|403382341|ref|ZP_10924398.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
JC66]
Length = 1041
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/183 (28%), Positives = 87/183 (47%), Gaps = 33/183 (18%)
Query: 9 CIPQQEKQQLLENIPQQEREGQLEDIPQQEKQ--PQQ---------QQQETFHVLAVDDS 57
IP +QQLLE+ E + P Q K PQQ + + + +L VDD
Sbjct: 660 TIPLATQQQLLEHNELNHHEMNKQITPDQNKNRLPQQSPVVLPAKVKGSKPYTILVVDDE 719
Query: 58 LIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLI 117
+ K+L +L+ Y V V SG +AL+ ++T+K V+L+
Sbjct: 720 PANLKVLIIMLQSLHYSVIAVGSGQEALD-----------------VITTEK----VDLL 758
Query: 118 MTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLS 176
+ D MP MTGY++ K ++ ++PV+++++ S + + GA ++L KPV L
Sbjct: 759 ILDLMMPHMTGYEVCKTVRQDYDLVELPVIILTASGQLSDLVASFQFGANDYLQKPVNLK 818
Query: 177 DLE 179
+LE
Sbjct: 819 ELE 821
>gi|158335119|ref|YP_001516291.1| response regulator receiver domain-containing protein
[Acaryochloris marina MBIC11017]
gi|158305360|gb|ABW26977.1| response regulator receiver domain protein, putative [Acaryochloris
marina MBIC11017]
Length = 595
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 23/137 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD +R +L L+ Y+V DSG+ ALE + D
Sbjct: 185 LLVVDDVEANRDMLSRRLQRKGYEVALADSGEAALELMATTD------------------ 226
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ L++ D MPG+ G + LKR++ + S +++PV++ ++++ V LE GA +++
Sbjct: 227 ---IALVLLDIMMPGIGGIETLKRIRQIYSQEELPVIMATAKDASENVVEALELGANDYI 283
Query: 170 LKPVRL-SDLEKLQPRL 185
KP+ L L ++Q L
Sbjct: 284 TKPIDLPVALARIQSHL 300
>gi|390958996|ref|YP_006422753.1| PAS domain-containing protein [Terriglobus roseus DSM 18391]
gi|390413914|gb|AFL89418.1| PAS domain S-box [Terriglobus roseus DSM 18391]
Length = 1042
Score = 61.6 bits (148), Expect = 2e-07, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 66/139 (47%), Gaps = 17/139 (12%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD+ +R+ILE LLR+ +V GD AL L + E
Sbjct: 644 VLIVDDNKTNRRILEGLLRIWGMEVASAPEGDTALAMLH----------------AAGLE 687
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVM-SSENVPSRVTMCLEEGAEEFL 169
S L++TD MP M G+ +++++K + +P V+M SS C + G +L
Sbjct: 688 GSPYRLLLTDMHMPKMDGFMVVQQMKQDTSLALPTVMMLSSGGHHGDANRCEQLGISAYL 747
Query: 170 LKPVRLSDLEKLQPRLLKS 188
LKPVR +L+ R L S
Sbjct: 748 LKPVRRQELQDAIARALGS 766
>gi|379011725|ref|YP_005269537.1| chemotaxis protein response regulator CheY2 [Acetobacterium woodii
DSM 1030]
gi|375302514|gb|AFA48648.1| chemotaxis protein response regulator CheY2 [Acetobacterium woodii
DSM 1030]
Length = 124
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 66/131 (50%), Gaps = 21/131 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L +DDS + RKI+ + V ++ +S AL+ L K
Sbjct: 3 MLTIDDSAVVRKIISAAVVVLGHECLEAESAQDALDLL--------------------KG 42
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++ LI D+ MPGM G + LK +K S +K +PVV++++EN+P V ++ G +++
Sbjct: 43 PEKIELIFLDWNMPGMNGLEFLKTIKKSDQFKHIPVVMVTTENMPESVIEAVKAGVTQYI 102
Query: 170 LKPVRLSDLEK 180
KP + +L K
Sbjct: 103 TKPFSIEELMK 113
>gi|330828170|ref|YP_004391122.1| CheY-like receiver [Aeromonas veronii B565]
gi|406678627|ref|ZP_11085802.1| hypothetical protein HMPREF1170_04010 [Aeromonas veronii AMC35]
gi|423201285|ref|ZP_17187865.1| hypothetical protein HMPREF1167_01448 [Aeromonas veronii AER39]
gi|423204149|ref|ZP_17190705.1| hypothetical protein HMPREF1168_00340 [Aeromonas veronii AMC34]
gi|423211141|ref|ZP_17197694.1| hypothetical protein HMPREF1169_03212 [Aeromonas veronii AER397]
gi|328803306|gb|AEB48505.1| CheY-like receiver [Aeromonas veronii B565]
gi|404614143|gb|EKB11147.1| hypothetical protein HMPREF1169_03212 [Aeromonas veronii AER397]
gi|404617857|gb|EKB14791.1| hypothetical protein HMPREF1167_01448 [Aeromonas veronii AER39]
gi|404621740|gb|EKB18606.1| hypothetical protein HMPREF1170_04010 [Aeromonas veronii AMC35]
gi|404627823|gb|EKB24621.1| hypothetical protein HMPREF1168_00340 [Aeromonas veronii AMC34]
Length = 338
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDDS RK++E LR + Y V G + LE + D L P T
Sbjct: 199 ILVVDDSAFIRKMIETTLRTAGYNVITAKDGGEGLEMMTDFDRLAQEERM-PVT------ 251
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
VN ++TD MP M G LLKRL+ S+K++P+V+ SS L+ GA + +
Sbjct: 252 -GFVNAVITDVEMPRMDGMHLLKRLRDTPSYKEMPIVMFSSLMSDDNRQKALQLGANDTI 310
Query: 170 LKP 172
KP
Sbjct: 311 TKP 313
>gi|218202508|gb|EEC84935.1| hypothetical protein OsI_32150 [Oryza sativa Indica Group]
Length = 623
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 70/134 (52%), Gaps = 22/134 (16%)
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DDS R I+ LLR Y+V G KA + L K++ +
Sbjct: 51 DDST--RHIICALLRKCGYRVAAASDGVKAWDIL-------------------KEKSFNI 89
Query: 115 NLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+L++T+ +P M+G+ LL ++ + K++PV++MSS + S V C+ +GA +FL+KP+
Sbjct: 90 DLVLTEVELPLMSGFLLLSTIMEHDACKNIPVIMMSSNDSVSMVFKCMLKGAADFLVKPI 149
Query: 174 RLSDLEKLQPRLLK 187
R ++L L + +
Sbjct: 150 RKNELRNLWQHVWR 163
>gi|62082589|gb|AAX62130.1| response regulator protein [Bacillus thuringiensis phage MZTP02]
Length = 342
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDDS RK++E LR + Y V G + LE + D L P T
Sbjct: 203 ILVVDDSAFIRKMIETTLRTAGYNVITAKDGGEGLEMMTDFDRLAQEERM-PVT------ 255
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
VN ++TD MP M G LLKRL+ S+K++P+V+ SS L+ GA + +
Sbjct: 256 -GFVNAVITDVEMPRMDGMHLLKRLRDTPSYKEMPIVMFSSLMSDDNRQKALQLGANDTI 314
Query: 170 LKP 172
KP
Sbjct: 315 TKP 317
>gi|392403424|ref|YP_006440036.1| integral membrane sensor hybrid histidine kinase [Turneriella parva
DSM 21527]
gi|390611378|gb|AFM12530.1| integral membrane sensor hybrid histidine kinase [Turneriella parva
DSM 21527]
Length = 912
Score = 61.6 bits (148), Expect = 3e-07, Method: Composition-based stats.
Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 26/160 (16%)
Query: 16 QQLLENIPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQV 75
++L E+I + R E+ + P ++ +++L VDD ++ ++L N L + Y+V
Sbjct: 509 ERLSESIANEMRARVTENPKETAGTPTKR---GYNILLVDDEPVNLQVLVNQLSLVGYKV 565
Query: 76 TCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLK-- 133
T +SG +A+ Y+ + E + I+ D MPGM+GYD+ +
Sbjct: 566 TVAESGKEAINYM--------------------EHEPVPDAILLDVMMPGMSGYDVSRIL 605
Query: 134 RLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
R K +S+ +VP+++++++N V E GA +++ KP+
Sbjct: 606 RNKYTSY-EVPILMLTAKNRSEDVIRGFEAGANDYISKPI 644
>gi|410094188|ref|ZP_11290639.1| sensory box protein/response regulator [Pseudomonas viridiflava
UASWS0038]
gi|409758403|gb|EKN43706.1| sensory box protein/response regulator [Pseudomonas viridiflava
UASWS0038]
Length = 705
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 22/129 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD + R +LE LL+ Y+ +SG++ALE + E
Sbjct: 8 ILIVDDDVHVRDLLEVLLQNQHYRTQTAESGEQALEMV---------------------E 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +LI+ D MPGM GY++ RLK + ++P++++S+ + S LE GAEE+L
Sbjct: 47 KHAPDLILLDIMMPGMDGYEVASRLKSGKTTSNIPIIMLSALDERSARISGLEAGAEEYL 106
Query: 170 LKPVRLSDL 178
KPV ++L
Sbjct: 107 NKPVDSAEL 115
>gi|336322409|ref|YP_004602376.1| response regulator receiver protein [Flexistipes sinusarabici DSM
4947]
gi|336105990|gb|AEI13808.1| response regulator receiver protein [Flexistipes sinusarabici DSM
4947]
Length = 121
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 72/139 (51%), Gaps = 22/139 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
VL DDS +R+++ + L+ + + VT V+ GD AL+ +
Sbjct: 2 LKVLLADDSSTEREMMSSALKSAGFDVTEVEDGDAALDAI-------------------- 41
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++ R + I+ D MPG GY + +++K S KD+PVV+++S+ S ++GA+E
Sbjct: 42 -KKDRFDCIILDIIMPGKNGYQVCRQVKKDESMKDIPVVIVTSKGQDSDKFWGKKQGADE 100
Query: 168 FLLKPVRLSDLEKLQPRLL 186
+L+KP + ++ K LL
Sbjct: 101 YLVKPFEMDEMVKTVKDLL 119
>gi|86158331|ref|YP_465116.1| two component sigma54 specific Fis family transcriptional regulator
[Anaeromyxobacter dehalogenans 2CP-C]
gi|85774842|gb|ABC81679.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter dehalogenans 2CP-C]
Length = 473
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD + R++L +L+ Y+VT G++AL L
Sbjct: 3 HVLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVL--------------------- 41
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ V++++TD MP + G +LL+R+ + DVPV+++++ L+ GA +++
Sbjct: 42 HRTPVHVVVTDLVMPRVGGMELLRRVS-QDFPDVPVILITAHGSVDSAVAALKAGAFDYI 100
Query: 170 LKPVRLSDLEKL 181
KP +L+K+
Sbjct: 101 TKPFEQDELKKV 112
>gi|197122377|ref|YP_002134328.1| Fis family transcriptional regulator [Anaeromyxobacter sp. K]
gi|220917159|ref|YP_002492463.1| two component sigma-54 specific Fis family transcriptional
regulator [Anaeromyxobacter dehalogenans 2CP-1]
gi|196172226|gb|ACG73199.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter sp. K]
gi|219955013|gb|ACL65397.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Anaeromyxobacter dehalogenans 2CP-1]
Length = 473
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 66/132 (50%), Gaps = 22/132 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD + R++L +L+ Y+VT G++AL L
Sbjct: 3 HVLIVDDEVNIRRVLAAMLKREGYEVTTAADGEQALGVL--------------------- 41
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ V++++TD MP + G +LL+R+ + DVPV+++++ L+ GA +++
Sbjct: 42 HRTPVHVVVTDLVMPRVGGMELLRRVS-QDFPDVPVILITAHGSVDSAVAALKAGAFDYI 100
Query: 170 LKPVRLSDLEKL 181
KP +L+K+
Sbjct: 101 TKPFEQEELKKV 112
>gi|386827265|ref|ZP_10114372.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
gi|386428149|gb|EIJ41977.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Beggiatoa alba B18LD]
Length = 127
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 22/137 (16%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPS 103
Q QE +L VDD ++ R LE LL YQ+ + G + L+
Sbjct: 2 QTQEKIPLLIVDDEIVSRSSLEALLESDEYQLFFAEDGAQGLD----------------- 44
Query: 104 TLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLE 162
K E L++ D MPGM G+++ +RL+ ++ +PV+++++ + P+ CL+
Sbjct: 45 ----KAESIHPVLMILDVMMPGMNGFEVCRRLRANAKLAQIPVIMITAWDDPTAKQRCLD 100
Query: 163 EGAEEFLLKPVRLSDLE 179
GA + + KP +DL+
Sbjct: 101 VGANDVICKPFNRADLQ 117
>gi|170728763|ref|YP_001762789.1| response regulator receiver modulated CheW protein [Shewanella
woodyi ATCC 51908]
gi|169814110|gb|ACA88694.1| response regulator receiver modulated CheW protein [Shewanella
woodyi ATCC 51908]
Length = 324
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 65/129 (50%), Gaps = 9/129 (6%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++E +L VDDS RK++EN LR + Y + G ALE L + L + AS S
Sbjct: 190 KREAKTILIVDDSAFIRKMIENTLRTAGYNIITAKDGGDALEMLEEFERLAEEAGASVSE 249
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEE 163
+ V+ I++D MP M G LLKRL+ S+K +P+V+ SS L
Sbjct: 250 M--------VSGIISDVEMPRMDGLHLLKRLRDKPSYKTMPIVMFSSLMSEDNRGKALAL 301
Query: 164 GAEEFLLKP 172
GA + + KP
Sbjct: 302 GANDTITKP 310
>gi|449528748|ref|XP_004171365.1| PREDICTED: uncharacterized protein LOC101224737 [Cucumis sativus]
Length = 631
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L VDD I+ +LR+ YQV + +AL+ TL +K
Sbjct: 10 HILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALD-----------------TLRARK 52
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+L++TD MP M G L K KV +PV++MS++ PS + LEEG ++
Sbjct: 53 --GYFDLVVTDLHMPQMNGLQLQK--KVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYM 108
Query: 170 LKPVRLSDLEKL 181
+KP+ L D++ +
Sbjct: 109 VKPISLDDVKHV 120
>gi|302338224|ref|YP_003803430.1| Fis family transcriptional regulator [Spirochaeta smaragdinae DSM
11293]
gi|301635409|gb|ADK80836.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Spirochaeta smaragdinae DSM 11293]
Length = 453
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 65/138 (47%), Gaps = 22/138 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
FH+L VDD R+ L L + ++V +G + T
Sbjct: 3 FHILIVDDEKNIREGLGKSLEMDGHKVFLAATGKDGWH------------------IVTT 44
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+E V+L++TD MP M G DLLK++ VSS+ VPVV+++ +++GA +F
Sbjct: 45 EE---VDLVITDLKMPEMGGSDLLKKI-VSSYPTVPVVILTGHGTIESAVSAIQDGAYDF 100
Query: 169 LLKPVRLSDLEKLQPRLL 186
L KPV L L + R L
Sbjct: 101 LTKPVDLERLSHIVRRAL 118
>gi|386346314|ref|YP_006044563.1| two component Fis family sigma54-specific transcriptional regulator
[Spirochaeta thermophila DSM 6578]
gi|339411281|gb|AEJ60846.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Spirochaeta thermophila DSM 6578]
Length = 453
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 22/140 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
F+VL DD R+ L+ L++ Y+V + GD+A + L
Sbjct: 3 FNVLVADDEKNIREGLKTFLQMEGYEVFLAEDGDRAKKIL-------------------- 42
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+E ++L++ D MPGM G +LL R V + VPV++++ + +GA +F
Sbjct: 43 -DEEDIDLVIADLKMPGMPGDELL-RYVVGGYPTVPVIILTGHGTIESAVQAMRDGAFDF 100
Query: 169 LLKPVRLSDLEKLQPRLLKS 188
L KP+ L L L R L +
Sbjct: 101 LTKPLNLDRLGLLVKRALST 120
>gi|356569201|ref|XP_003552793.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 557
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 72/147 (48%), Gaps = 21/147 (14%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNA 100
P++ VL VDD KILE +L+ +Y+VT AL L
Sbjct: 9 PKRDFPAGLRVLVVDDDPTWLKILEKMLKKCNYEVTTCCLARHALSLL------------ 56
Query: 101 SPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMC 160
++ + +++++D MP M G+ LL+ + + D+PV++MS + S+V
Sbjct: 57 -------RERKDGYDIVISDVNMPDMDGFKLLEHVGLE--MDLPVIMMSVDGETSKVMKG 107
Query: 161 LEEGAEEFLLKPVRLSDLEKLQPRLLK 187
++ GA ++LLKP+R+ +L + + +
Sbjct: 108 VQHGACDYLLKPIRMKELRNIWQHVFR 134
>gi|407799528|ref|ZP_11146421.1| response regulator [Oceaniovalibus guishaninsula JLT2003]
gi|407058713|gb|EKE44656.1| response regulator [Oceaniovalibus guishaninsula JLT2003]
Length = 427
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 73/144 (50%), Gaps = 22/144 (15%)
Query: 31 LEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL 90
+ D P Q P + +L VDDS + R+IL + L+ + Y V DS + ALE
Sbjct: 2 MHDRPIQPAGPAGARPALQRILIVDDSRLQRRILISALKNTGYIVEEADSAEAALE---- 57
Query: 91 IDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMS 149
+ P ++I++D+ MPGMTG DL + ++ + + + V ++++
Sbjct: 58 -----ACARRMP------------DMILSDWMMPGMTGVDLCRAVRGIQAERYVYFIILT 100
Query: 150 SENVPSRVTMCLEEGAEEFLLKPV 173
S++ + L++GA++FL KP+
Sbjct: 101 SKSEKGELASALQQGADDFLTKPI 124
>gi|153870115|ref|ZP_01999582.1| adenylate/guanylate cyclase [Beggiatoa sp. PS]
gi|152073419|gb|EDN70418.1| adenylate/guanylate cyclase [Beggiatoa sp. PS]
Length = 396
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 71/138 (51%), Gaps = 25/138 (18%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPS 103
Q +E FHVL VDD I+ +ILEN LRV +Y +T +G AL+ L
Sbjct: 245 QGREDFHVLIVDDDPINLQILENQLRVENYAITRATTGHDALKAL--------------- 289
Query: 104 TLSTKKEESRV--NLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMC 160
ES + +I+ D MP M+G+++ + ++ +P+++++++N S +
Sbjct: 290 -------ESGIPFAIILLDIMMPKMSGFEVCQIIRQTYPANQLPIIMLTAKNQVSDLVQG 342
Query: 161 LEEGAEEFLLKPVRLSDL 178
++ GA ++L KP +L
Sbjct: 343 MQAGANDYLTKPFSKGEL 360
>gi|224099559|ref|XP_002311532.1| type-b response regulator [Populus trichocarpa]
gi|222851352|gb|EEE88899.1| type-b response regulator [Populus trichocarpa]
Length = 303
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 82/174 (47%), Gaps = 28/174 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD + ++LE +LR Y VT AL+ L ++
Sbjct: 11 VLVVDDDITCLRLLEKMLRRCLYHVTTCSQATAALKLL-------------------RER 51
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS++ S V + GA ++L+
Sbjct: 52 KGCFDVVLSDVHMPDMDGFKLLELVGLE--MDLPVIMMSADGRTSAVMRGISHGACDYLI 109
Query: 171 KPVRLSDLEKLQPRLLKSP------NRSCGNNEDSDNDNK-NETSNYKSSTNSA 217
KP+R +L+ + +++ G+ ED+D + N+ N S + A
Sbjct: 110 KPIREEELKNIWQHVIRKKWNENKEQEHSGSFEDNDRHKRGNDAENASSVSEGA 163
>gi|398823058|ref|ZP_10581426.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Bradyrhizobium sp. YR681]
gi|398226232|gb|EJN12486.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Bradyrhizobium sp. YR681]
Length = 498
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 69/147 (46%), Gaps = 22/147 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R+++EN+++ Y V+SGD A+ L T +
Sbjct: 5 ILIADDDAVARRLVENMVQKCGYDTVVVESGDAAIAAL------------------TAPD 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ ++ D MPG+ G +L +++ + VPV+V ++ V + GA +F++
Sbjct: 47 APVIDGVILDLVMPGLDGMGVLAKIR-DAGLSVPVIVQTAHGGIDNVISAMRAGAADFVV 105
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNE 197
KPV +E+LQ L + N S E
Sbjct: 106 KPV---GVERLQVSLRNALNASALKGE 129
>gi|320354148|ref|YP_004195487.1| multi-sensor hybrid histidine kinase [Desulfobulbus propionicus DSM
2032]
gi|320122650|gb|ADW18196.1| multi-sensor hybrid histidine kinase [Desulfobulbus propionicus DSM
2032]
Length = 900
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 35/173 (20%)
Query: 35 PQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYL--GLID 92
P E+ P + +L +D I++ ++ LLR + YQVT V++G KA++ GL D
Sbjct: 746 PSDEQMPLSNHGQ--RILVAEDEYINKILIRTLLRQAGYQVTVVENGRKAVDAWRGGLFD 803
Query: 93 NLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW--KDVPVVVMSS 150
I+ D MP M GY+ + R++ + + +P++ M++
Sbjct: 804 -----------------------CILMDIQMPEMDGYEAVARIREAEGDNQHIPIIAMTA 840
Query: 151 ENVPSRVTMCLEEGAEEFLLKPVRLSDLEK-----LQP-RLLKSPNRSCGNNE 197
+PS CL G ++++ KP+ S + K LQP R+ P G +E
Sbjct: 841 HAMPSDRQKCLSSGMDDYVSKPIDGSSVLKIIEKYLQPTRVPDPPKHRLGKHE 893
>gi|226499102|ref|NP_001151536.1| two-component response regulator-like PRR95 [Zea mays]
gi|195647486|gb|ACG43211.1| two-component response regulator-like PRR95 [Zea mays]
Length = 630
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 22/128 (17%)
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DDS R ++ LLR Y+V G KA + L K++ +
Sbjct: 52 DDST--RHVISALLRKCGYRVAAASDGVKAWDIL-------------------KEKSFNI 90
Query: 115 NLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+L++T+ +P M+G+ LL ++ + K++PV++MSS + S V C+ +GA +FL+KP+
Sbjct: 91 DLVLTEVELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGAADFLVKPL 150
Query: 174 RLSDLEKL 181
R ++L L
Sbjct: 151 RKNELRNL 158
>gi|443302653|gb|AGC82268.1| cAMP phosphodiesterase [Dictyostelium lacteum]
Length = 698
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 71/141 (50%), Gaps = 24/141 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L DD +I RKILEN+L+ Y V +G++A E L +K
Sbjct: 89 HILVADDDVIQRKILENVLKKFHYN---VHNGEEAWECL-------------------EK 126
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTM-CLEEGAEE 167
+ + +L++TD MP + G+DL ++ + + +PV++MS V + ++ G ++
Sbjct: 127 GQVKYDLVLTDVMMPEINGFDLCTKINLHPVFNKIPVILMSGTAVDYKCANDTIKIGGQD 186
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
FL KP+ L+K LL S
Sbjct: 187 FLTKPIAKELLKKKIDTLLGS 207
>gi|255084361|ref|XP_002508755.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
gi|226524032|gb|ACO70013.1| g2-like myb-transcription factor with a n-terminal response
regulator receiver domain [Micromonas sp. RCC299]
Length = 488
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 21/157 (13%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
VL VDD + KI+E +L+ Y+VT G +AL+ TL +
Sbjct: 14 LRVLVVDDDPLCLKIVEKMLKRCQYEVTTFSRGAEALK-----------------TLRER 56
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
K++ +++++D MP M G+ LL+ + + D+PV++MS+ V + GA ++
Sbjct: 57 KDD--FDIVLSDVHMPDMDGFKLLEHIALE--LDIPVMMMSANCATDVVLRGIIHGAVDY 112
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKN 205
LLKPVR+ +L + +++ S N S N
Sbjct: 113 LLKPVRIEELRNIWQHVVRRKRESSQGNLRSGEGGSN 149
>gi|389579963|ref|ZP_10169990.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
gi|389401598|gb|EIM63820.1| response regulator with CheY-like receiver, AAA-type ATPase, and
DNA-binding domains [Desulfobacter postgatei 2ac9]
Length = 141
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 24/160 (15%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
++ +L VDDS+ R +L+ L + Y G + LE SN +
Sbjct: 2 SYSILIVDDSMPMRTVLKRSLAAAGY------GGSRILE----------ASNGKEALTVL 45
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAE 166
K E V+LIMTDY MP M G LK +K + +K++PV+V+S+E S++ ++ GA
Sbjct: 46 KGE--WVDLIMTDYNMPEMNGLSFLKTVKTEALFKEIPVIVISTEGNDSKIKEFIDTGAA 103
Query: 167 EFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNE 206
++ KP L L ++ + E+S +D+ NE
Sbjct: 104 GYITKPFTPEALRDLIVSIIGEADY-----EESIDDSDNE 138
>gi|386817120|ref|ZP_10104338.1| integral membrane sensor hybrid histidine kinase [Thiothrix nivea
DSM 5205]
gi|386421696|gb|EIJ35531.1| integral membrane sensor hybrid histidine kinase [Thiothrix nivea
DSM 5205]
Length = 792
Score = 61.2 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 22/143 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L VDD ++R LL + T VDSG +A+ L
Sbjct: 670 HILLVDDDEMNRFFGRELLNRLNATTTAVDSGAEAIHQL--------------------- 708
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E+ +LI D MP M GY+ ++++ + +P++ +++ + CL+ G ++
Sbjct: 709 EQHTFDLIFMDVSMPEMDGYETTRKIRTDPRFAKLPIIALTAHAITGEKERCLDAGMNDY 768
Query: 169 LLKPVRLSDLEKLQPRLLKSPNR 191
L KP L D++ L R LK+ R
Sbjct: 769 LTKPFALVDMQTLLLRWLKTDTR 791
>gi|24251269|gb|AAN46189.1| unknown protein [Synechococcus elongatus PCC 7942]
Length = 411
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 30/144 (20%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L +D+ I+R +LE LR + V CV SG +AL L
Sbjct: 175 LLVAEDNEINRDVLERRLRRLGHDVVCVASGQEALNQLA--------------------- 213
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +L+ D MPG+TG+++L++LK + ++PV+++S+ + V CL GA ++L
Sbjct: 214 QQPFDLLFLDVMMPGLTGFEVLQQLKADPTLAELPVLMISALDDLESVIRCLRLGATDYL 273
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSC 193
KP +P LL++ +C
Sbjct: 274 TKP--------FEPTLLQTRLETC 289
>gi|240255903|ref|NP_193346.4| two-component response regulator ARR2 [Arabidopsis thaliana]
gi|50400708|sp|Q9ZWJ9.1|ARR2_ARATH RecName: Full=Two-component response regulator ARR2; AltName:
Full=Receiver-like protein 5
gi|4210451|dbj|BAA74527.1| ARR2 protein [Arabidopsis thaliana]
gi|51969616|dbj|BAD43500.1| hypothetical protein [Arabidopsis thaliana]
gi|51970060|dbj|BAD43722.1| hypothetical protein [Arabidopsis thaliana]
gi|51971425|dbj|BAD44377.1| hypothetical protein [Arabidopsis thaliana]
gi|94958295|gb|ABF47278.1| ARR2 [Arabidopsis thaliana]
gi|94958297|gb|ABF47279.1| ARR2 [Arabidopsis thaliana]
gi|332658294|gb|AEE83694.1| two-component response regulator ARR2, partial [Arabidopsis
thaliana]
Length = 664
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 34/178 (19%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +L Y+VT + + AL L +K
Sbjct: 30 VLVVDDDPTCLMILERMLMTCLYRVTKCNRAESALSLL-------------------RKN 70
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS+++ S V + GA ++L+
Sbjct: 71 KNGFDIVISDVHMPDMDGFKLLEHVGLE--MDLPVIMMSADDSKSVVLKGVTHGAVDYLI 128
Query: 171 KPVRLSDLEKLQPRLLKS-------PNRSCGNNEDSDND------NKNETSNYKSSTN 215
KPVR+ L+ + +++ S G+ ED+ D ++ + N SS N
Sbjct: 129 KPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVN 186
>gi|302873857|ref|YP_003842490.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|307689897|ref|ZP_07632343.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
gi|302576714|gb|ADL50726.1| response regulator receiver sensor signal transduction histidine
kinase [Clostridium cellulovorans 743B]
Length = 366
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 63/124 (50%), Gaps = 22/124 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD+ + KI+ +L+ Y + SG +ALE ++ N+
Sbjct: 9 ILVVDDTPFNIKIVSTILQEVGYNIYSTTSGREALE---MVKNI---------------- 49
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
R NLI+ D MP M GY+++++LK +D+P++ +++ V +EGA ++L
Sbjct: 50 --RFNLILLDVMMPEMDGYEVIRKLKNDEDTRDIPIIFLTARGDSESVVRAFDEGAYDYL 107
Query: 170 LKPV 173
+KP
Sbjct: 108 IKPF 111
>gi|281308386|gb|ADA58341.1| pseudo-response regulator 5a [Brassica rapa]
Length = 497
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 71/138 (51%), Gaps = 22/138 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ DDS R+I+ LLR SY+V V G KA E L K
Sbjct: 59 LVEADDST--RQIISALLRKCSYRVAAVPDGLKAWEML-------------------KGN 97
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
V+LI+ + +P ++GY LL ++ K++PV++MS+ + + V C+ +GA ++L
Sbjct: 98 PESVDLILAEVDLPSISGYALLTLIMEHDVCKNIPVIMMSTHDSVNTVYKCMLKGAADYL 157
Query: 170 LKPVRLSDLEKLQPRLLK 187
+KP+R ++L L + +
Sbjct: 158 VKPLRRNELRNLWQHVWR 175
>gi|326515596|dbj|BAK07044.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD + K+LE LLR Y VT + AL L ++
Sbjct: 26 VLAVDDDPVCLKVLETLLRRCQYHVTATNQAIIALRML-------------------REN 66
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+L+++D MP M G+ LL+ + + D+PV+++S V + GA ++LL
Sbjct: 67 RDMFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSVNGETKTVMKGITHGACDYLL 124
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L+ + +++
Sbjct: 125 KPVRIEELKNIWQHVVR 141
>gi|163801654|ref|ZP_02195552.1| Signal transduction histidine kinase [Vibrio sp. AND4]
gi|159174571|gb|EDP59373.1| Signal transduction histidine kinase [Vibrio sp. AND4]
Length = 1240
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 21/147 (14%)
Query: 40 QPQQQQ--QETFHVLAVDDSLIDRKILENLLRVSSYQVTC--VDSGDKALEYLGLIDNLE 95
QPQQ Q Q + VL VDD I+R + + + +TC +G +A+E L E
Sbjct: 996 QPQQNQTCQCSGRVLVVDDDPINRLLFKR--QFEKMGITCQLAATGIEAIEAL---TQSE 1050
Query: 96 NNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVP 154
NN +P +L++TD MP M GY L +RLK + ++ +PVV ++EN
Sbjct: 1051 NNKANAP-----------FSLVITDCHMPDMDGYQLTQRLKENPNFASIPVVACTAENSR 1099
Query: 155 SRVTMCLEEGAEEFLLKPVRLSDLEKL 181
+ + G E L KP LSDL+ L
Sbjct: 1100 NVIEKAAHHGIETVLFKPYNLSDLQAL 1126
>gi|307718254|ref|YP_003873786.1| transcriptional regulatory protein [Spirochaeta thermophila DSM
6192]
gi|306531979|gb|ADN01513.1| transcriptional regulatory protein [Spirochaeta thermophila DSM
6192]
Length = 453
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 22/140 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
F+VL DD R+ L+ L + Y+V + GD+A + L
Sbjct: 3 FNVLVADDEKNIREGLKTFLEMEGYEVFLAEDGDRAKKIL-------------------- 42
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
+E ++L++ D MPGM G +LL R V + VPV++++ + +GA +F
Sbjct: 43 -DEEDIDLVIADLKMPGMPGDELL-RYVVGGYPTVPVIILTGHGTIESAVQAMRDGAFDF 100
Query: 169 LLKPVRLSDLEKLQPRLLKS 188
L KP+ L L L R L +
Sbjct: 101 LTKPLNLDRLGLLVKRALST 120
>gi|434399888|ref|YP_007133892.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera
PCC 7437]
gi|428270985|gb|AFZ36926.1| CheA signal transduction histidine kinase [Stanieria cyanosphaera
PCC 7437]
Length = 977
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 73/138 (52%), Gaps = 21/138 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L +DS+ R++LE +L YQV G +AL+ L +
Sbjct: 857 ILIAEDSVATRRMLEKILSAVGYQVIVCRDGQEALDVL-------------------DQH 897
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++R++L+++D MP + G++LL++++ W+++PVV+ +S ++ GA +L
Sbjct: 898 QTRIDLVLSDIEMPRVNGFELLQKIRSHPVWEEIPVVMATSRTGDRHRQQAMDLGATGYL 957
Query: 170 LKPVRLSD-LEKLQPRLL 186
KP++ + LEK++ LL
Sbjct: 958 GKPIQPQELLEKVESLLL 975
>gi|357480193|ref|XP_003610382.1| Two-component response regulator ARR1 [Medicago truncatula]
gi|355511437|gb|AES92579.1| Two-component response regulator ARR1 [Medicago truncatula]
Length = 633
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 70/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD K+LE L Y VT +ALE L +++
Sbjct: 23 VLAVDDDQTSLKVLEKHLLTCKYNVTTTTKSVEALELL-------------------REK 63
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
S +LI++D MP M G+ LL+++ + D+P +++S + RV + +GA ++L+
Sbjct: 64 RSMFDLIISDVNMPEMDGFKLLEQVGLE--MDLPFIMLSGHDDRERVMKGVMKGACDYLV 121
Query: 171 KPVRLSDLEKLQPRLLK 187
KP+RL +L+ + +++
Sbjct: 122 KPIRLEELKNIWQHVVR 138
>gi|339302489|ref|ZP_08651538.1| DNA-binding response regulator [Streptococcus agalactiae ATCC
13813]
gi|319744078|gb|EFV96455.1| DNA-binding response regulator [Streptococcus agalactiae ATCC
13813]
Length = 223
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 22/140 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L V+D+++ +KI+ L YQ +G +AL L +
Sbjct: 4 ILVVEDNIVQQKIITTKLTQEGYQFITASNGQEALNCL---------------------D 42
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
V LI+TD MP M GY L++ L+ +++ +VP++VM++++ +T GA+++++
Sbjct: 43 TEEVQLIITDIMMPMMDGYQLIQELRSAAY-NVPIIVMTAKSQMEDMTKGFGLGADDYMV 101
Query: 171 KPVRLSDLEKLQPRLLKSPN 190
KPV+L +L LL+ N
Sbjct: 102 KPVQLQELALRIKALLRRAN 121
>gi|301061357|ref|ZP_07202137.1| PAS domain S-box protein [delta proteobacterium NaphS2]
gi|300444534|gb|EFK08519.1| PAS domain S-box protein [delta proteobacterium NaphS2]
Length = 492
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 62/126 (49%), Gaps = 22/126 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD + R +L Y++T ++G +ALE LG
Sbjct: 6 HVLVVDDEKVVRDGCRRVLSGRGYEITTAENGSQALEILG-------------------- 45
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+++++ D MP M+G ++L+R + + D+PV+V++ C+++GA +F+
Sbjct: 46 -AEHIDILLLDLKMPVMSGEEVLERTR-DTHPDIPVIVITGHGTVDTAVECMKKGAYDFI 103
Query: 170 LKPVRL 175
KP ++
Sbjct: 104 TKPFQI 109
>gi|39726361|gb|AAR30123.1| putative histidine kinase HHK6p [Gibberella moniliformis]
Length = 1369
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 74/159 (46%), Gaps = 20/159 (12%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
HVL V+D+ I++KI + +QVT +G +ALEYL + K
Sbjct: 1105 IHVLVVEDNPINQKIATKTIGKLGFQVTAAWNGKEALEYLAGVH---------------K 1149
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-----WKDVPVVVMSSENVPSRVTMCLEE 163
+ + ++I+ D MP + GY L+ +DVP+V M++ + C +
Sbjct: 1150 GIKQKPDIILMDVQMPIIDGYKCTHLLRHHMPYKPLVEDVPIVAMTASAIQGDREKCTKA 1209
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDND 202
G +++L KPVR LEK+ R + R+ + + +D
Sbjct: 1210 GMDDYLAKPVRGVILEKMLLRWCHARRRTSATPDPTASD 1248
>gi|434387416|ref|YP_007098027.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Chamaesiphon minutus PCC 6605]
gi|428018406|gb|AFY94500.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Chamaesiphon minutus PCC 6605]
Length = 373
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 65/124 (52%), Gaps = 22/124 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD + +++E LL + Y + + SG+ E ID L+ P
Sbjct: 9 ILVVDDERANFELIETLLTIDKYNLHYISSGE---EVFAAIDRLD------P-------- 51
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++I+ D MPGM G + +RL++ W+ +P++++++ S + CL+ GA++F+
Sbjct: 52 ----DVILLDLMMPGMDGLAVCQRLRLMRKWRSIPIIIVTAAAGKSILASCLDAGADDFI 107
Query: 170 LKPV 173
KPV
Sbjct: 108 NKPV 111
>gi|25010196|ref|NP_734591.1| DNA-binding response regulator [Streptococcus agalactiae NEM316]
gi|76786780|ref|YP_328847.1| DNA-binding response regulator [Streptococcus agalactiae A909]
gi|77409199|ref|ZP_00785910.1| DNA-binding response regulator [Streptococcus agalactiae COH1]
gi|77414552|ref|ZP_00790696.1| DNA-binding response regulator [Streptococcus agalactiae 515]
gi|406708645|ref|YP_006763371.1| DNA-binding response regulator [Streptococcus agalactiae
GD201008-001]
gi|421146582|ref|ZP_15606291.1| DNA-binding response regulator [Streptococcus agalactiae GB00112]
gi|424050134|ref|ZP_17787683.1| DNA-binding response regulator [Streptococcus agalactiae ZQ0910]
gi|23094547|emb|CAD45766.1| Unknown [Streptococcus agalactiae NEM316]
gi|76561837|gb|ABA44421.1| DNA-binding response regulator [Streptococcus agalactiae A909]
gi|77159393|gb|EAO70560.1| DNA-binding response regulator [Streptococcus agalactiae 515]
gi|77172207|gb|EAO75365.1| DNA-binding response regulator [Streptococcus agalactiae COH1]
gi|389648363|gb|EIM69871.1| DNA-binding response regulator [Streptococcus agalactiae ZQ0910]
gi|401686771|gb|EJS82742.1| DNA-binding response regulator [Streptococcus agalactiae GB00112]
gi|406649530|gb|AFS44931.1| DNA-binding response regulator [Streptococcus agalactiae
GD201008-001]
Length = 223
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 22/140 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L V+D+++ +KI+ L YQ +G +AL L +
Sbjct: 4 ILVVEDNIVQQKIITTKLTQEGYQFITASNGQEALNCL---------------------D 42
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
V LI+TD MP M GY L++ L+ +++ +VP++VM++++ +T GA+++++
Sbjct: 43 TEEVQLIITDIMMPMMDGYQLIQELRSAAY-NVPIIVMTAKSQMEDMTKGFGLGADDYMV 101
Query: 171 KPVRLSDLEKLQPRLLKSPN 190
KPV+L +L LL+ N
Sbjct: 102 KPVQLQELALRIKALLRRAN 121
>gi|170694368|ref|ZP_02885522.1| response regulator receiver protein [Burkholderia graminis C4D1M]
gi|170140791|gb|EDT08965.1| response regulator receiver protein [Burkholderia graminis C4D1M]
Length = 125
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 22/125 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+LA+DDS R+IL L + Y+VT G + LE N+ A
Sbjct: 4 HILAIDDSASMRQILSATLTAAGYEVTLAADGAEGLE----------NALA--------- 44
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
R +L++TD MPG TG DL+ L+ + ++ D P++V+++E+ E GA +
Sbjct: 45 --VRFDLVLTDQHMPGKTGLDLIAELRGNPAYADTPILVLTTESGEPFKAAAREAGATGW 102
Query: 169 LLKPV 173
+ KP+
Sbjct: 103 IEKPL 107
>gi|22536308|ref|NP_687159.1| DNA-binding response regulator [Streptococcus agalactiae 2603V/R]
gi|77412156|ref|ZP_00788478.1| DNA-binding response regulator [Streptococcus agalactiae CJB111]
gi|417004187|ref|ZP_11942920.1| DNA-binding response regulator [Streptococcus agalactiae FSL
S3-026]
gi|22533130|gb|AAM99031.1|AE014196_27 DNA-binding response regulator [Streptococcus agalactiae 2603V/R]
gi|77161774|gb|EAO72763.1| DNA-binding response regulator [Streptococcus agalactiae CJB111]
gi|341577986|gb|EGS28383.1| DNA-binding response regulator [Streptococcus agalactiae FSL
S3-026]
Length = 223
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 72/140 (51%), Gaps = 22/140 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L V+D+++ +KI+ L YQ +G +AL L +
Sbjct: 4 ILVVEDNIVQQKIITTKLTQEGYQFITASNGQEALNCL---------------------D 42
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
V LI+TD MP M GY L++ L+ +++ +VP++VM++++ +T GA+++++
Sbjct: 43 TEEVQLIITDIMMPMMDGYQLIQELRSAAY-NVPIIVMTAKSQMEDMTKGFGLGADDYMV 101
Query: 171 KPVRLSDLEKLQPRLLKSPN 190
KPV+L +L LL+ N
Sbjct: 102 KPVQLQELALRIKALLRRAN 121
>gi|414590048|tpg|DAA40619.1| TPA: hypothetical protein ZEAMMB73_710468 [Zea mays]
Length = 596
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 68/128 (53%), Gaps = 22/128 (17%)
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DDS R ++ LLR Y+V G KA + L K++ +
Sbjct: 52 DDST--RHVISALLRKCGYRVAAASDGVKAWDIL-------------------KEKSFNI 90
Query: 115 NLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+L++T+ +P M+G+ LL ++ + K++PV++MSS + S V C+ +GA +FL+KP+
Sbjct: 91 DLVLTEVELPLMSGFLLLSTIMEHDASKNIPVIMMSSHDSVSMVFKCMLKGASDFLVKPL 150
Query: 174 RLSDLEKL 181
R ++L L
Sbjct: 151 RKNELRNL 158
>gi|403381658|ref|ZP_10923715.1| two-component hybrid sensor and regulator [Paenibacillus sp. JC66]
Length = 1052
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 66/133 (49%), Gaps = 22/133 (16%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T H+LAVDD ++ K+L ++L + + SG +ALE L
Sbjct: 722 TVHILAVDDDPVNLKVLTSILEKDEFHIETASSGVEALERL------------------- 762
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAE 166
E +L++ D MP M+GYD KR++ S ++PV+++++ + P + GA
Sbjct: 763 --NERPWDLLIVDVMMPYMSGYDFTKRVREEFSISELPVLLLTARSQPQDIYTGFLSGAN 820
Query: 167 EFLLKPVRLSDLE 179
+++ KPV +L+
Sbjct: 821 DYVTKPVDALELQ 833
>gi|307731387|ref|YP_003908611.1| response regulator receiver protein [Burkholderia sp. CCGE1003]
gi|307585922|gb|ADN59320.1| response regulator receiver protein [Burkholderia sp. CCGE1003]
Length = 125
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 64/125 (51%), Gaps = 22/125 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+LA+DDS R+IL L + Y+VT G + LE N+ A
Sbjct: 4 HILAIDDSASMRQILSATLTAAGYEVTLAADGAEGLE----------NALA--------- 44
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
R +L++TD MPG TG DL+ L+ + ++K+ P++V+++E+ E GA +
Sbjct: 45 --MRFDLVLTDQHMPGKTGLDLIAELRGNPAYKETPILVLTTESGEPFKAAAREAGATGW 102
Query: 169 LLKPV 173
+ KP+
Sbjct: 103 IEKPL 107
>gi|260576146|ref|ZP_05844139.1| response regulator receiver modulated serine phosphatase
[Rhodobacter sp. SW2]
gi|259021626|gb|EEW24929.1| response regulator receiver modulated serine phosphatase
[Rhodobacter sp. SW2]
Length = 422
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 68/135 (50%), Gaps = 32/135 (23%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDDS RKIL LL Y+VT SG++AL
Sbjct: 22 HVLVVDDSKAQRKILSMLLLRWGYRVTEAGSGEEALALC--------------------- 60
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVP------VVVMSSENVPSRVTMCLEE 163
+E+ ++I++D+ MPGMTG + + S++ +P ++++S++ + V L+
Sbjct: 61 QETSFDIILSDWMMPGMTGVEFCR-----SFRGLPREGYGYFILLTSKSEKTEVADGLDG 115
Query: 164 GAEEFLLKPVRLSDL 178
GA++FL KPV +L
Sbjct: 116 GADDFLTKPVSADEL 130
>gi|302843336|ref|XP_002953210.1| hypothetical protein VOLCADRAFT_93905 [Volvox carteri f.
nagariensis]
gi|300261597|gb|EFJ45809.1| hypothetical protein VOLCADRAFT_93905 [Volvox carteri f.
nagariensis]
Length = 1844
Score = 61.2 bits (147), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 73/131 (55%), Gaps = 20/131 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
F +L+VDD +++ ++++LL + Y+V V SG +AL Y+ + A P
Sbjct: 772 FLLLSVDDDHVNQSVVKSLLGSTGYEVVAVPSGPEALRYVA-------TAPALP------ 818
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWK-DVPVVVMSSENVPSRVTMCLEEGAEE 167
+L++ D MP M GY++L+RL+ + VP++++S++ V L+ GA++
Sbjct: 819 ------DLVLLDCMMPEMDGYEVLQRLRAMTPNVHVPIIMVSAQTEEEHVVCGLDLGADD 872
Query: 168 FLLKPVRLSDL 178
++ KP + ++L
Sbjct: 873 YVTKPFKRNEL 883
Score = 47.4 bits (111), Expect = 0.006, Method: Composition-based stats.
Identities = 36/159 (22%), Positives = 80/159 (50%), Gaps = 21/159 (13%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ +DD +++ +L+ +L Y+ +G + L Y+ +N P
Sbjct: 992 IVCIDDDDVNQVVLQGMLASQHYRYVRASTGAQGLSYVCGT----HNGGIPP-------- 1039
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+L++ D +P MTG+D+ + ++ + + + VPV+++S+ + S V L+ GA ++
Sbjct: 1040 ----DLVLLDCSLPDMTGFDVCRCIRQMYNKQQVPVIMLSARHNESAVVEGLKCGANTYV 1095
Query: 170 LKPVRLSDLEKLQPRLLKS----PNRSCGNNEDSDNDNK 204
KP R ++L + L+S P S G++ ++D++
Sbjct: 1096 TKPFRRNELLARIRQHLRSREPVPGLSRGDSSVEESDSR 1134
>gi|186681682|ref|YP_001864878.1| integral membrane sensor hybrid histidine kinase [Nostoc
punctiforme PCC 73102]
gi|186464134|gb|ACC79935.1| integral membrane sensor hybrid histidine kinase [Nostoc
punctiforme PCC 73102]
Length = 909
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 93/191 (48%), Gaps = 26/191 (13%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD+L +R I+ NLL +++T +G L+ K
Sbjct: 692 ILIVDDNLENRSIVVNLLGDLGFEITEAINGQDGLD---------------------KAV 730
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
E + +LI+TD MP M G +++++L+V ++++P++V S+ S LE G +FL
Sbjct: 731 ELKPDLIITDLSMPVMNGLEMIRQLRVLPFENLPIIVSSASVFESDQHESLEGGGNDFLP 790
Query: 171 KPVRLSDL-EKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTNSAFSKRKALSAEAP 229
KPV+ ++L +KLQ L +++ +N+ N K ++ + L + P
Sbjct: 791 KPVQANELFQKLQKHLQFEWIYDVIQSQEGVKENQ----NLKVTSADSLVSDTCLISPPP 846
Query: 230 ERRPKMKEVAV 240
E K+ E+A+
Sbjct: 847 EEIEKLFELAM 857
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 68/141 (48%), Gaps = 31/141 (21%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSG----DKALEYLGLIDNLENNSNASPSTLS 106
+L VDD +R ++ NLL +++ G DKA+++L P
Sbjct: 532 ILIVDDRWENRSVVMNLLDEIGFEIIEASDGQEGLDKAMQFL-------------P---- 574
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGA 165
+LI+TD MP M G++L +RL+ ++D+ ++V S+ S L GA
Sbjct: 575 --------DLIITDLTMPVMDGFELTRRLRQQQEFQDLTIIVSSASVFESDQHKSLGVGA 626
Query: 166 EEFLLKPVRLSD-LEKLQPRL 185
++FL KPV D L+KL+ L
Sbjct: 627 DDFLPKPVHADDLLQKLEKYL 647
>gi|449446191|ref|XP_004140855.1| PREDICTED: uncharacterized protein LOC101217116 [Cucumis sativus]
Length = 634
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 21/132 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L VDD I+ +LR+ YQV + +AL+ L +
Sbjct: 10 HILLVDDDATSLAIVSAMLRLCKYQVVTLKDPMEALDTL-------------------RA 50
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +L++TD MP M G L K KV +PV++MS++ PS + LEEG ++
Sbjct: 51 RKGYFDLVVTDLHMPQMNGLQLQK--KVMQEFKLPVIMMSADEKPSVILKSLEEGVAFYM 108
Query: 170 LKPVRLSDLEKL 181
+KP+ L D++ +
Sbjct: 109 VKPISLDDVKHV 120
>gi|443317340|ref|ZP_21046753.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
gi|442783029|gb|ELR92956.1| signal transduction histidine kinase [Leptolyngbya sp. PCC 6406]
Length = 381
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 75/136 (55%), Gaps = 22/136 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDDS+ +R +L++LL Y VT ++G KAL+++ + K E
Sbjct: 7 VLIVDDSVDNRFLLQSLLEDEGYIVTVAENGAKALDHI-----------------AGKGE 49
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+LI+ D MPGM+GY++ + ++ + +P++++++ S V L+ GA++F+
Sbjct: 50 AQLPDLILLDVMMPGMSGYEVTRWVRGQAELPFIPILLVTAHE-QSNVVEGLDAGADDFI 108
Query: 170 LKPVRLSDLEKLQPRL 185
KP D+E+L R+
Sbjct: 109 RKPF---DVEELLARV 121
>gi|160894574|ref|ZP_02075350.1| hypothetical protein CLOL250_02126 [Clostridium sp. L2-50]
gi|156863885|gb|EDO57316.1| response regulator receiver domain protein [Clostridium sp. L2-50]
Length = 127
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 23/137 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL +DD + +++ +L + V+ V+ G KA L E
Sbjct: 5 VLVIDDDKVILDMIQGVL-ADKFDVSAVNDGQKAFRVL---------------------E 42
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
R ++I+ D MPGM GYD++ RLKV+ +K++PV+ +++ T C E GAE+++
Sbjct: 43 RVRPDIILLDLKMPGMDGYDVISRLKVNQEYKNIPVIFLTAVTDEYSETKCFEAGAEDYI 102
Query: 170 LKPVRLSDLEKLQPRLL 186
KP + L R+L
Sbjct: 103 CKPFTANALTARIERVL 119
>gi|334130776|ref|ZP_08504566.1| Acetoacetate metabolism regulatory protein atoC [Methyloversatilis
universalis FAM5]
gi|333444176|gb|EGK72132.1| Acetoacetate metabolism regulatory protein atoC [Methyloversatilis
universalis FAM5]
Length = 468
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 62/132 (46%), Gaps = 22/132 (16%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
HVL VDD + R+ L LR +VT D+G+ AL L ++
Sbjct: 5 HVLLVDDEAVAREGLATALRRDGLEVTTADNGEAALALL-------------------RQ 45
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E V ++TD MPGM G +LL+R + +W + V+V++ + GA ++
Sbjct: 46 REYEV--LLTDVKMPGMDGLELLRRAR-EAWPGMEVLVVTGFATTESAVEAMRAGAFYYV 102
Query: 170 LKPVRLSDLEKL 181
KP RL ++ KL
Sbjct: 103 SKPFRLGEVRKL 114
>gi|158521557|ref|YP_001529427.1| histidine kinase [Desulfococcus oleovorans Hxd3]
gi|158510383|gb|ABW67350.1| histidine kinase [Desulfococcus oleovorans Hxd3]
Length = 545
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 27/173 (15%)
Query: 15 KQQLLENIPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQ 74
+ + +EN P + +L P E+ P + H L VDD+ ++RK+L +L + ++
Sbjct: 397 RNRTVENNPGVPGDTRLS-APSPEETPAYKG----HALVVDDNPVNRKVLVAML--TRHK 449
Query: 75 VTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKR 134
++C D +EN A + +L+ D MP M GY+ K+
Sbjct: 450 ISC--------------DVVENGKQAVAAC-----ARKHYDLVFMDCLMPVMDGYEATKK 490
Query: 135 LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
++ + K +P++ ++++ VP CL G +++ KP ++ DL + R LK
Sbjct: 491 IR-EARKALPIIAITADVVPETRDRCLAAGMNDYITKPFKMQDLLDMTDRYLK 542
>gi|334118352|ref|ZP_08492441.1| response regulator receiver sensor signal transduction histidine
kinase [Microcoleus vaginatus FGP-2]
gi|333459359|gb|EGK87972.1| response regulator receiver sensor signal transduction histidine
kinase [Microcoleus vaginatus FGP-2]
Length = 395
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 22/126 (17%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
F +L VDD + ++E LL YQ+ SG +A+ L L D P
Sbjct: 22 FSLLIVDDEPDNFDVIETLLSEQDYQLHYAASGQEAIASLDLFD---------P------ 66
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+LI+ D MPG+ G ++ +++K +S W+ VP++++++ + S + CL GA++
Sbjct: 67 ------DLILLDVMMPGIDGIEICRQIKAMSKWQAVPIIMVTALSSKSDLANCLTAGADD 120
Query: 168 FLLKPV 173
F+ KPV
Sbjct: 121 FISKPV 126
>gi|315644507|ref|ZP_07897639.1| signal transduction histidine kinase, LytS [Paenibacillus vortex
V453]
gi|315280014|gb|EFU43311.1| signal transduction histidine kinase, LytS [Paenibacillus vortex
V453]
Length = 1031
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 36/136 (26%), Positives = 74/136 (54%), Gaps = 24/136 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ++ ++L +LL +Y + +G +ALE++ +
Sbjct: 699 VLLVDDDPVNLQVLRSLLFAENYNLLTASNGVQALEHI--------------------RS 738
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++L++TD+ MPGM+G L + ++ + ++P++++++ ++P V L+ GA +FL
Sbjct: 739 GQGIDLVITDWMMPGMSGLQLCRTVREQHTLFELPILMLTARSLPEDVRTGLQAGANDFL 798
Query: 170 LKPVRLSDLEKLQPRL 185
KPV D ++L+ R+
Sbjct: 799 RKPV---DADELRARV 811
>gi|443325192|ref|ZP_21053899.1| PAS domain S-box [Xenococcus sp. PCC 7305]
gi|442795204|gb|ELS04584.1| PAS domain S-box [Xenococcus sp. PCC 7305]
Length = 1689
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 69/137 (50%), Gaps = 22/137 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD +R++L + L +++ DSG A+ K +
Sbjct: 1465 ILVVDDLENNREVLVDFLTPLGFEIIEADSGTDAI---------------------AKIQ 1503
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E + +L++ D MP + G ++ + L+ S+W+++P++++S+ +P+ + C GA FL
Sbjct: 1504 EHQPDLVILDLVMPELDGLEVTQILRQESAWQNLPIIIVSASTLPADESQCYLAGANAFL 1563
Query: 170 LKPVRLSDLEKLQPRLL 186
KP+ + L KL R L
Sbjct: 1564 AKPLNFTQLTKLLERHL 1580
>gi|434388197|ref|YP_007098808.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Chamaesiphon minutus PCC 6605]
gi|428019187|gb|AFY95281.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Chamaesiphon minutus PCC 6605]
Length = 394
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 67/127 (52%), Gaps = 22/127 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
++ +L VDD + ++E LL SY++ + G+ A+ L D P
Sbjct: 3 SYSILVVDDEPDNFDVIEALLPSESYRLYYANCGEDAINLLDKFD---------P----- 48
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
++I+ D MPG+ G+++ KR+K+ S W+ VP++++++ + + CL GA+
Sbjct: 49 -------DVILLDVMMPGLNGFEVCKRIKLMSQWQGVPIIMVTALSSKEDLARCLAAGAD 101
Query: 167 EFLLKPV 173
+FL KPV
Sbjct: 102 DFLSKPV 108
>gi|251794919|ref|YP_003009650.1| signal transduction histidine kinase LytS [Paenibacillus sp. JDR-2]
gi|247542545|gb|ACS99563.1| signal transduction histidine kinase, LytS [Paenibacillus sp.
JDR-2]
Length = 1112
Score = 60.8 bits (146), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/167 (23%), Positives = 80/167 (47%), Gaps = 27/167 (16%)
Query: 14 EKQQLLENIPQQEREGQLEDIPQ-----QEKQPQQQQQET--FHVLAVDDSLIDRKILEN 66
E + LE + + G + +P+ + P ++ T +L VDD + K+L+
Sbjct: 729 ETHRELEKVRAEAAVGLEQQLPEASLLTKSGTPLYTEEGTGEVKILLVDDDSSNIKVLQE 788
Query: 67 LLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGM 126
L S Y V +G+ AL+ + K+ ++L++ D MPG+
Sbjct: 789 LFPSSRYHVFVAYNGEDALKLI-------------------KQHRGELSLVLLDVMMPGL 829
Query: 127 TGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKP 172
+GY++ +R++ + +PV++++ N P+ + + E GA +FL+KP
Sbjct: 830 SGYEVCRRIREENPLYQLPVLLLTVRNSPADIALGFEAGANDFLVKP 876
>gi|225425924|ref|XP_002267616.1| PREDICTED: two-component response regulator ARR11 [Vitis vinifera]
gi|297738324|emb|CBI27525.3| unnamed protein product [Vitis vinifera]
Length = 594
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD KILE +L+ Y+VT AL L ++
Sbjct: 19 VLVVDDDPTWLKILEKMLKKCLYEVTICGLARDALNLL-------------------RER 59
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+ + + D+PV++MS + SRV ++ GA ++LL
Sbjct: 60 KDGYDIVISDVNMPDMDGFKLLELVGLE--MDLPVIMMSVDGETSRVMKGVQHGACDYLL 117
Query: 171 KPVRLSDLEKLQPRLLK 187
KP+R+ +L + + +
Sbjct: 118 KPIRMKELRNIWQHVFR 134
>gi|406892098|gb|EKD37544.1| hypothetical protein ACD_75C01094G0008 [uncultured bacterium]
Length = 476
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 22/131 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD R L+ LL ++V D+GDKALE LG N S
Sbjct: 20 VLVVDDERSMRDFLKILLEKEGHKVVTADNGDKALEILG------NQS------------ 61
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++++++D MPG+TG +LL+ +K S D+PV+++++ P + ++ GA +++
Sbjct: 62 ---LDVVVSDIRMPGITGIELLELIKKES-PDLPVIMITAFASPDDAVLAMKNGAFDYIS 117
Query: 171 KPVRLSDLEKL 181
KP + +++ +
Sbjct: 118 KPFNVDEIKSV 128
>gi|312283015|dbj|BAJ34373.1| unnamed protein product [Thellungiella halophila]
Length = 486
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 20/140 (14%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
VL V+ R+I+ LLR Y+V V G A E L K
Sbjct: 41 LRVLLVESDDSTRQIITALLRKCYYKVVAVSDGLAAWETL-------------------K 81
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++ ++LI+T+ +P ++G+ LL ++ + K++PV++MSS++ + V C+ GA +
Sbjct: 82 EKSHSIDLILTELDLPSISGFALLALVMENEACKNIPVIMMSSQDSITLVLKCMLRGAAD 141
Query: 168 FLLKPVRLSDLEKLQPRLLK 187
+L+KP+R ++L+ L + +
Sbjct: 142 YLIKPMRKNELKNLWQHVWR 161
>gi|377819561|ref|YP_004975932.1| response regulator receiver domain-containing protein [Burkholderia
sp. YI23]
gi|357934396|gb|AET87955.1| response regulator receiver domain-containing protein [Burkholderia
sp. YI23]
Length = 125
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+LA+DDS R+IL L + Y+VT GD+ LE+
Sbjct: 4 HILAIDDSAAMRQILSATLATAGYEVTVASDGDEGLEW---------------------A 42
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
R +L++TD MPG +G DL+ L+ + ++K P++V+++E GA +
Sbjct: 43 LAERFDLVLTDQHMPGRSGLDLIVALRANHAYKATPILVLTTEGGEPFKDAARSAGATGW 102
Query: 169 LLKPV 173
+ KP+
Sbjct: 103 IEKPL 107
>gi|335042045|ref|ZP_08535072.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain containing protein [Methylophaga
aminisulfidivorans MP]
gi|333788659|gb|EGL54541.1| response regulator containing a CheY-like receiver domain and an
HD-GYP domain containing protein [Methylophaga
aminisulfidivorans MP]
Length = 349
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 68/129 (52%), Gaps = 20/129 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD + ++ NLLR SY+ + +SG+KAL L NS+
Sbjct: 7 ILIVDDVPDNIQVAMNLLREDSYEFSFANSGEKALSIL--------NSD----------- 47
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++ +LI+ D MPG+ GY+ KR+K SS ++D+P++ ++++ + + +++
Sbjct: 48 DADFDLILLDIMMPGIDGYETCKRIKASSQYQDIPIIFLTAKADVDSIAKAFQADGVDYV 107
Query: 170 LKPVRLSDL 178
KP ++L
Sbjct: 108 TKPFHAAEL 116
>gi|240146535|ref|ZP_04745136.1| response regulator [Roseburia intestinalis L1-82]
gi|257201346|gb|EEU99630.1| response regulator [Roseburia intestinalis L1-82]
Length = 144
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 23/131 (17%)
Query: 43 QQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASP 102
+Q +ET +L VDDS + R +L + ++ + V SG++ L+ +
Sbjct: 2 EQSKET--LLIVDDSRLQRAVLNEIFS-PAFNILEVSSGEECLQMI-------------- 44
Query: 103 STLSTKKEESRVNLIMTDYCMPGMTGYDLLK-RLKVSSWKDVPVVVMSSENVPSRVTMCL 161
K +++ ++L++ D M GM G+D+LK R ++ +K +PVVV+++ + P T
Sbjct: 45 -----KDKKNMIDLVLLDLVMQGMDGFDVLKHRQEMPEFKQIPVVVLTTTDTPEVQTKAF 99
Query: 162 EEGAEEFLLKP 172
E GA +FL KP
Sbjct: 100 ELGASDFLSKP 110
>gi|404493599|ref|YP_006717705.1| sigma-54-dependent transcriptional response regulator [Pelobacter
carbinolicus DSM 2380]
gi|404398002|gb|ABA89201.2| sigma-54-dependent transcriptional response regulator [Pelobacter
carbinolicus DSM 2380]
Length = 460
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 72/142 (50%), Gaps = 25/142 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L ++D +R+ + LL + YQVT ++G+KALE L
Sbjct: 7 ILVIEDEAANREAIALLLGNAGYQVTTAETGEKALEIL---------------------S 45
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +I+TD +PG++G ++LKR+K W V++++ + ++EGA +++
Sbjct: 46 KTPFEVILTDLFLPGVSGIEILKRVK-EQWPFTNVILITGKGSAESAVEAMKEGAFDYIT 104
Query: 171 KPVRLSDLEKLQPRLLKSPNRS 192
KP+ EKLQ + K+ +S
Sbjct: 105 KPLH---FEKLQVIIAKAVEKS 123
>gi|312960966|ref|ZP_07775471.1| two-component response regulator [Pseudomonas fluorescens WH6]
gi|311284624|gb|EFQ63200.1| two-component response regulator [Pseudomonas fluorescens WH6]
Length = 413
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 64/124 (51%), Gaps = 22/124 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD RK+LE LL+ YQ SG++AL TL ++
Sbjct: 8 LLIVDDEPQVRKLLETLLQHEGYQTRSASSGEEAL------------------TLVAQQP 49
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+LI+ D MPGM G+++ RLK + + ++P++++S+ N P L GAEEF+
Sbjct: 50 P---DLILLDVMMPGMDGFEVANRLKSNPATSNIPIIMLSALNEPGARVSGLHTGAEEFI 106
Query: 170 LKPV 173
KPV
Sbjct: 107 NKPV 110
>gi|237799880|ref|ZP_04588341.1| sensory box protein/response regulator, partial [Pseudomonas
syringae pv. oryzae str. 1_6]
gi|331022735|gb|EGI02792.1| sensory box protein/response regulator [Pseudomonas syringae pv.
oryzae str. 1_6]
Length = 464
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 22/129 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD + R +LE LLR Y+ +SG++A L +ID
Sbjct: 8 ILIVDDDVHVRDLLEVLLRNQHYETLTAESGEQA---LAMID------------------ 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E +LI+ D MPGM GY++ +LK ++P++++S+ + S LE GAEE+L
Sbjct: 47 ERAPDLILLDIMMPGMDGYEVASQLKARKGTANIPIIMLSALDEQSARLSGLEAGAEEYL 106
Query: 170 LKPVRLSDL 178
KPV ++L
Sbjct: 107 NKPVESAEL 115
>gi|398355744|ref|YP_006401208.1| adenylate cyclase Cya [Sinorhizobium fredii USDA 257]
gi|390131070|gb|AFL54451.1| adenylate cyclase Cya [Sinorhizobium fredii USDA 257]
Length = 554
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 82/179 (45%), Gaps = 33/179 (18%)
Query: 2 ELKPQVECIPQQEKQQLLENIPQQEREG----QLEDI---PQQEKQPQQQQQETFHVLAV 54
EL QV+ I + +E + +++ G +LE + + P Q + +L V
Sbjct: 163 ELLKQVDAIAGLSRGAAIEALQPRDQAGLDAAELERLLFKTGHDAWPDQGGR----ILVV 218
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DD +R +L LR ++V DSG AL L +E
Sbjct: 219 DDVASNRDLLSRRLRREGHRVAVADSGLSALARL---------------------QEGEF 257
Query: 115 NLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKP 172
+LI+ D MP M G ++L RLK W+ +PV+++S N + V C+E GA+++L KP
Sbjct: 258 DLILLDILMPDMNGIEVLSRLKAEDRWRHIPVIMISGLNEVAAVARCIEAGADDYLTKP 316
>gi|302923768|ref|XP_003053746.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734687|gb|EEU48033.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1371
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 80/173 (46%), Gaps = 22/173 (12%)
Query: 35 PQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNL 94
P QE P ++ + H+L V+D+ I++KI + +QVT +G +ALEYL +
Sbjct: 1092 PDQELPPSERAK--IHILVVEDNPINQKIATKTIGRLGFQVTAAWNGKEALEYLSGVH-- 1147
Query: 95 ENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-----SWKDVPVVVMS 149
+ + + ++I+ D MP + GY L+ +DVP+V M+
Sbjct: 1148 -------------QGIKPKPDIILMDVQMPIIDGYKCTHLLRHHLPYKPIVQDVPIVAMT 1194
Query: 150 SENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDND 202
+ + C G +++L KPVR LEK+ R + R+ + S +D
Sbjct: 1195 ASAIQGDREKCTRAGMDDYLAKPVRSVILEKMLLRWCHARRRASTAPDPSASD 1247
>gi|307107757|gb|EFN55999.1| hypothetical protein CHLNCDRAFT_30989, partial [Chlorella
variabilis]
Length = 334
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 74/148 (50%), Gaps = 18/148 (12%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD + K++ +L+ +Y+V SG AL L L D E+N
Sbjct: 36 VLVVDDDPMCLKVVSAMLQRCNYEVDTRTSGQDAL--LLLRDRQEHNH------------ 81
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +L+++D MP M G+ LL+ + + D+PV++MSS V + GA +FL+
Sbjct: 82 --QFDLVLSDVYMPDMDGFKLLEHIGLE--LDLPVIMMSSNGDTDVVLRGVTHGAVDFLI 137
Query: 171 KPVRLSDLEKLQPRLLKSPNRSCGNNED 198
KPVR+ +L + +++ + G D
Sbjct: 138 KPVRVEELRNVWQHVVRRRSLHVGRASD 165
>gi|357512643|ref|XP_003626610.1| Two-component response regulator-like PRR37 [Medicago truncatula]
gi|87240854|gb|ABD32712.1| Response regulator receiver; CCT [Medicago truncatula]
gi|355501625|gb|AES82828.1| Two-component response regulator-like PRR37 [Medicago truncatula]
Length = 636
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 22/134 (16%)
Query: 55 DDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRV 114
DDS R I+ LLR Y+V V G KA E L K + +
Sbjct: 22 DDST--RHIISALLRNCGYKVAAVRDGLKAWETL-------------------KNKSLDI 60
Query: 115 NLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+L++T+ +P ++G+ LL + + + K++P+++MSS++ S V + GA +FL+KPV
Sbjct: 61 DLVLTEVDLPSISGFSLLTQIMDHHNCKNIPLIMMSSQDSVSTVFKFMLNGAVDFLIKPV 120
Query: 174 RLSDLEKLQPRLLK 187
R ++L L + +
Sbjct: 121 RRNELRNLWQHVWR 134
>gi|428217824|ref|YP_007102289.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
gi|427989606|gb|AFY69861.1| response regulator receiver modulated diguanylate cyclase
[Pseudanabaena sp. PCC 7367]
Length = 334
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 70/150 (46%), Gaps = 31/150 (20%)
Query: 46 QETFHVLAVDDSLIDRKILE-NLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
E F++L VDD+ ++R +L +L+R Q+ ++G +ALE L
Sbjct: 4 HEDFNLLIVDDNEMNRDVLRRHLVRQGYQQILAAENGKEALEML---------------- 47
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEE 163
+LI+ D MP M GY+LL LK +PV+++S+ + V C+E
Sbjct: 48 -----SGHNFDLILLDIQMPQMNGYELLAYLKADLKLSHIPVIMISAVDEIDSVVRCIEM 102
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKSPNRSC 193
GAE++L KP LLK+ +C
Sbjct: 103 GAEDYLHKP--------FNRVLLKARTSAC 124
>gi|409991354|ref|ZP_11274623.1| two-component hybrid sensor and regulator [Arthrospira platensis
str. Paraca]
gi|291566270|dbj|BAI88542.1| two-component hybrid sensor and regulator [Arthrospira platensis
NIES-39]
gi|409937789|gb|EKN79184.1| two-component hybrid sensor and regulator [Arthrospira platensis
str. Paraca]
Length = 728
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 10 IPQQEKQQLLENIPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLR 69
+P E ++ L E E Q E I + + P+ + + +L V+D L ++ ++ +L
Sbjct: 565 LPLTEMRRELAKSYHPEHESQ-EVIKPEPETPKLNKVDCPRILVVEDQLFNQLLITEVLE 623
Query: 70 VSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGY 129
+ YQV + G+ L+ + N++ P L +LI+ D +P + G+
Sbjct: 624 LEGYQVELIADGNTMLDMI-------NSTMVKPEILP--------DLILMDIQLPEVDGF 668
Query: 130 DLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+L++RLK SS WK VPVV +++ + CL GA+ +L KP+
Sbjct: 669 ELIRRLKQSSLWKVVPVVAVTAMVMSGDRERCLVAGADGYLSKPL 713
>gi|33330870|gb|AAQ10678.1| type-B response regulator [Catharanthus roseus]
Length = 643
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 30/174 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD +ILE +L+ Y+VT + + AL+ L +N N
Sbjct: 38 VLVVDDDPTCLRILEKMLKNCLYEVTKCNRAEIALKLL------RDNRNG---------- 81
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+++++D MP M G+ LL+++ + D+PV++MS+++ + V + GA ++L+
Sbjct: 82 ---YDIVISDVHMPDMDGFKLLEQVGLE--MDLPVIMMSADDSKNVVMKGVTHGACDYLI 136
Query: 171 KPVRLSDLEKLQPRLLKSPNR--------SCGNNEDSDNDNK-NETSNYKSSTN 215
KPVR+ L+ + +++ G+ ED + K NE +Y SS N
Sbjct: 137 KPVRIEALKNIWQHVVRKGKHEWKEKDYEQSGSVEDGERQQKPNEDVDYSSSAN 190
>gi|84570633|dbj|BAE72701.1| pseudo-response regulator 59 homologue [Lemna gibba]
Length = 496
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 25/171 (14%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
+ + VL V+ R I+ LLR SY V V G KA + +
Sbjct: 54 RRSLRVLLVEPDDSTRHIVTALLRKCSYHVASVADGIKAWDIV----------------- 96
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEG 164
K++ ++I+++ +P +G LL ++ + + +PV++MSS++ S V C+++G
Sbjct: 97 --KEKNFNFDIILSEVEVPSFSGISLLTKIMGTELSRSIPVIMMSSQDSVSVVFKCMQKG 154
Query: 165 AEEFLLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNETSNYKSSTN 215
A +FL+KPVR ++L L + + R C N +N +N +S N
Sbjct: 155 AVDFLVKPVRKNELRNLWQHVWR---RHCSTR--YPNGAENGANNPSASEN 200
>gi|227823948|ref|YP_002827921.1| adenylate/guanylate cyclase [Sinorhizobium fredii NGR234]
gi|227342950|gb|ACP27168.1| putative adenylate/guanylate cyclase [Sinorhizobium fredii NGR234]
Length = 520
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 29/177 (16%)
Query: 2 ELKPQVECIPQQEKQQLLENIPQQEREGQLEDIPQQEKQPQQQQQETF-----HVLAVDD 56
EL QVE I +E + +++ G D + E+ + +Q+ + +L VDD
Sbjct: 129 ELLKQVEAIAGLSHGSAIEALQPRDQAGL--DAAELERLLFRTEQDAWPDQGGRILVVDD 186
Query: 57 SLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNL 116
+R +L LR ++V DSG AL L E +L
Sbjct: 187 VASNRDLLSRRLRREGHRVVTADSGLSALARL---------------------TEQEFDL 225
Query: 117 IMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKP 172
++ D MP M G ++L RLK W+ VPV+++S N + V C+E GA+++L KP
Sbjct: 226 LLLDILMPDMNGIEVLSRLKAEDRWRHVPVIMISGLNEVAAVARCIEAGADDYLTKP 282
>gi|120554284|ref|YP_958635.1| integral membrane sensor hybrid histidine kinase [Marinobacter
aquaeolei VT8]
gi|120324133|gb|ABM18448.1| integral membrane sensor hybrid histidine kinase [Marinobacter
aquaeolei VT8]
Length = 644
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 27/154 (17%)
Query: 40 QPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSN 99
+P++Q T L V+D+L+++K+ E LLR +Q CV +G A+ +
Sbjct: 511 EPREQVTGTARALVVEDNLVNQKVTEALLRKFGFQTECVTNGTDAVRRI----------- 559
Query: 100 ASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWK------DVPVVVMSSENV 153
K + ++I+ D MP M GYD + ++ W+ VP++ ++++
Sbjct: 560 --------KNDHEGYDVILMDCQMPVMDGYDATRMIR--DWEQGNGQSGVPIIALTADVS 609
Query: 154 PSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
C E G ++L KPVR L ++ R ++
Sbjct: 610 EDTEKACKEAGMNDYLTKPVRRDTLREVLSRWIR 643
>gi|356510875|ref|XP_003524159.1| PREDICTED: two-component response regulator ARR11-like [Glycine
max]
Length = 584
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 71/137 (51%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD +ILE +L+ Y+VT +AL+ L ++
Sbjct: 20 VLVVDDDPTWLRILEKMLKKCLYEVTTCCLATEALKKL-------------------RER 60
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ +++++D MP M G+ LL+++ + D+PV++MS + SRV ++ GA ++LL
Sbjct: 61 KDAYDIVISDVNMPDMDGFKLLEQVGLE--MDLPVIMMSVDGETSRVMKGVQHGACDYLL 118
Query: 171 KPVRLSDLEKLQPRLLK 187
KP+R+ +L + + +
Sbjct: 119 KPIRMKELRNIWQHVFR 135
>gi|422648645|ref|ZP_16711765.1| sensory box protein/response regulator [Pseudomonas syringae pv.
maculicola str. ES4326]
gi|330962179|gb|EGH62439.1| sensory box protein/response regulator [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 705
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 22/134 (16%)
Query: 46 QETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTL 105
Q +L VDD + R +LE LL+ +Y+ +SG+ ALE + L +P
Sbjct: 3 QSAATILIVDDDVHVRDLLEVLLQNQNYRTLTAESGEVALEMVEL---------HAP--- 50
Query: 106 STKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEG 164
+LI+ D MPGM GY++ +LK + S ++P++++S+ + S LE G
Sbjct: 51 ---------DLILLDIMMPGMDGYEVASQLKANKSTANIPIIMLSALDQQSARLSGLEAG 101
Query: 165 AEEFLLKPVRLSDL 178
AEE+L KPV S+L
Sbjct: 102 AEEYLNKPVDSSEL 115
>gi|297804596|ref|XP_002870182.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
gi|297316018|gb|EFH46441.1| hypothetical protein ARALYDRAFT_915160 [Arabidopsis lyrata subsp.
lyrata]
Length = 676
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 28/159 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +L Y+VT + + AL L +K
Sbjct: 30 VLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLL-------------------RKN 70
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS+++ S V + GA ++L+
Sbjct: 71 KNGFDIVISDVHMPDMDGFKLLEHVGLE--MDLPVIMMSADDSKSVVLKGVTHGAVDYLI 128
Query: 171 KPVRLSDLEKLQPRLLKS-------PNRSCGNNEDSDND 202
KPVR+ L+ + +++ S G+ ED+ D
Sbjct: 129 KPVRIEALKNIWQHVVRKKRNDWNVSEHSGGSIEDTGGD 167
>gi|387814447|ref|YP_005429932.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase A, N-terminal, partial
[Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|381339462|emb|CCG95509.1| putative Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal precursor
[Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 644
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 72/154 (46%), Gaps = 27/154 (17%)
Query: 40 QPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSN 99
+P++Q T L V+D+L+++K+ E LLR +Q CV +G A+ +
Sbjct: 511 EPREQVTGTARALVVEDNLVNQKVTEALLRKFGFQTECVTNGTDAVRRI----------- 559
Query: 100 ASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWK------DVPVVVMSSENV 153
K + ++I+ D MP M GYD + ++ W+ VP++ ++++
Sbjct: 560 --------KNDHEGYDVILMDCQMPVMDGYDATRMIR--DWEQGNGQSGVPIIALTADVS 609
Query: 154 PSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLK 187
C E G ++L KPVR L ++ R ++
Sbjct: 610 EDTEKACKEAGMNDYLTKPVRRDTLREVLSRWIR 643
>gi|117924807|ref|YP_865424.1| response regulator receiver modulated diguanylate cyclase with
PAS/PAC sensor [Magnetococcus marinus MC-1]
gi|117608563|gb|ABK44018.1| response regulator receiver modulated diguanylate cyclase with
PAS/PAC sensor [Magnetococcus marinus MC-1]
Length = 571
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCV-DSGDKALEYLGLIDNLENNSNASPSTLSTK 108
H+ VDDS DR +L +L + Y + DSG+ L+ LGL + ++ +P
Sbjct: 2 HIAIVDDSPDDRLLLMRILSKAGYSTLQLHDSGEAFLQTLGLTPT--DTASIAPFN---P 56
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEE 167
S ++I D MP M G +L++LK + +++PV++++ + P + EEGA +
Sbjct: 57 PHTSLPDIIFMDVMMPDMDGLSVLRQLKANPPTQNIPVIMVTGNDRPRDLAHAFEEGATD 116
Query: 168 FLLKPVRLSDL 178
++ KP+R +L
Sbjct: 117 YITKPIRRVEL 127
>gi|254513978|ref|ZP_05126039.1| adenylate cyclase 1 (ATP pyrophosphate-lyase 1) [gamma
proteobacterium NOR5-3]
gi|219676221|gb|EED32586.1| adenylate cyclase 1 (ATP pyrophosphate-lyase 1) [gamma
proteobacterium NOR5-3]
Length = 496
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 68/144 (47%), Gaps = 29/144 (20%)
Query: 31 LEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL 90
+E IP +P +LAVDD +R++L L S + V G +ALE L
Sbjct: 131 IEPIPGLTGEPG-------FILAVDDREENRELLARYLTRSGHFVVTAPGGAEALEML-- 181
Query: 91 IDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMS 149
+NA V++++ D MPGM G ++L+R+K + PV+++S
Sbjct: 182 -------ANAD------------VDVVLLDRMMPGMDGREVLRRIKAEPKLRATPVIMIS 222
Query: 150 SENVPSRVTMCLEEGAEEFLLKPV 173
E + C+E GA+++L KP
Sbjct: 223 GEQDMQGIIECIEAGADDYLFKPF 246
>gi|427708788|ref|YP_007051165.1| response regulator receiver sensor signal transduction histidine
kinase [Nostoc sp. PCC 7107]
gi|427361293|gb|AFY44015.1| response regulator receiver sensor signal transduction histidine
kinase [Nostoc sp. PCC 7107]
Length = 409
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 64/124 (51%), Gaps = 22/124 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD ++ KIL +L + Y+V+ +G ALE K E
Sbjct: 9 ILVVDDVPLNIKILLEILTQAGYRVSVAKNGKSALE---------------------KVE 47
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E+ NLI+ D MPG+ G++ + LK +S KD+P++ M++ + P L+ GA +++
Sbjct: 48 EAIPNLILLDVMMPGIDGFETCRLLKANSKTKDIPIIFMTALSEPINKVKGLQLGAVDYI 107
Query: 170 LKPV 173
KP+
Sbjct: 108 TKPI 111
>gi|261408948|ref|YP_003245189.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
gi|261285411|gb|ACX67382.1| integral membrane sensor hybrid histidine kinase [Paenibacillus sp.
Y412MC10]
Length = 1049
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 87/177 (49%), Gaps = 29/177 (16%)
Query: 23 PQQEREGQ--LEDIPQQEKQPQQQ----QQETFHVLAVDDSLIDRKILENLLRVSSYQVT 76
P++E+E Q + D+ +Q+ + + +L VDD ++ K++ +LL Y++
Sbjct: 687 PEKEKETQSNMSDMHEQDDAESEALALARPSDGRLLIVDDDPVNLKVIHHLLADEGYRIV 746
Query: 77 CVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK 136
V ++AL+ L E+ +LI++D MP M+GY+L + ++
Sbjct: 747 TVTRAEEALQLL---------------------EQGEWDLIISDVMMPQMSGYELSRTIR 785
Query: 137 VSSW-KDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPNRS 192
++P++++++ N P + M GA ++L+KPV +L K + R L RS
Sbjct: 786 QRYMLSELPILLLTARNRPEDIHMGFISGANDYLIKPVDHLEL-KTRVRALLELKRS 841
>gi|333998219|ref|YP_004530831.1| acetoacetate metabolism regulatory protein AtoC [Treponema primitia
ZAS-2]
gi|333738561|gb|AEF84051.1| acetoacetate metabolism regulatory protein AtoC
(Ornithine/argininedecarboxylase inhibitor) (Ornithine
decarboxylase antizyme) [Treponema primitia ZAS-2]
Length = 452
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 22/140 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
F +L DD R+ L L + YQV GD A +
Sbjct: 3 FRLLVADDEKNIREGLAASLEMDGYQVETAAEGDAAFKRF-------------------- 42
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
++ ++L++TD MPG++G +LLKR+ S +PV+V++ + GA +F
Sbjct: 43 -QKGDIDLVITDLRMPGLSGEELLKRID-SETPGIPVIVLTGHGTVENAVAAMRNGAYDF 100
Query: 169 LLKPVRLSDLEKLQPRLLKS 188
L KPV L+ L L R L++
Sbjct: 101 LTKPVDLNHLSLLVKRALQN 120
>gi|328952978|ref|YP_004370312.1| response regulator receiver modulated diguanylate cyclase
[Desulfobacca acetoxidans DSM 11109]
gi|328453302|gb|AEB09131.1| response regulator receiver modulated diguanylate cyclase
[Desulfobacca acetoxidans DSM 11109]
Length = 392
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 67/135 (49%), Gaps = 22/135 (16%)
Query: 39 KQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNS 98
K ++ E +L VDD + ++L +L Y V+ +G +AL+
Sbjct: 11 KHVKELLAEPVEILVVDDCPVQAELLRYILENQKYLVSIARNGQEALD------------ 58
Query: 99 NASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRV 157
K EE R L+++D MP M G++L +R+K V +KD+PV++++S N S V
Sbjct: 59 ---------KLEERRPTLVISDIAMPEMDGFELCRRIKAVDRFKDLPVIILTSLNDLSHV 109
Query: 158 TMCLEEGAEEFLLKP 172
L+ G + F+ KP
Sbjct: 110 MQGLKCGTDNFISKP 124
>gi|94449082|gb|ABF19058.1| ARR2 [Arabidopsis thaliana]
gi|94449084|gb|ABF19059.1| ARR2 [Arabidopsis thaliana]
Length = 664
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 84/178 (47%), Gaps = 34/178 (19%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD ILE +L Y+VT + + AL L +K
Sbjct: 30 VLVVDDDPTCLMILERMLMTCLYRVTKCNRAEIALSLL-------------------RKN 70
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ +++++D MP M G+ LL+ + + D+PV++MS+++ S V + GA ++L+
Sbjct: 71 KNGFDIVISDVHMPDMDGFKLLEHVGLE--MDLPVIMMSADDSKSVVLKGVTHGAVDYLI 128
Query: 171 KPVRLSDLEKLQPRLLKS-------PNRSCGNNEDSDND------NKNETSNYKSSTN 215
KPVR+ L+ + +++ S G+ ED+ D ++ + N SS N
Sbjct: 129 KPVRIEALKNIWQHVVRKKRNEWNVSEHSGGSIEDTGGDRDRQQQHREDADNNSSSVN 186
>gi|157373649|ref|YP_001472249.1| chemotaxis protein CheW [Shewanella sediminis HAW-EB3]
gi|157316023|gb|ABV35121.1| putative CheW protein [Shewanella sediminis HAW-EB3]
Length = 326
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
++E +L VDDS RK++EN LR + Y + G ALE L + L + AS +
Sbjct: 190 KREAKTILVVDDSAFIRKMIENTLRSAGYNIITAKDGGDALEMLLEYERLAVDEGASVND 249
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEE 163
V+ I+TD MP M G L+KRL+ S++ ++P+V+ SS + L+
Sbjct: 250 F--------VSAIITDVEMPRMDGMHLVKRLRDTSAYSNMPIVMFSSLMSEDNRSKALQL 301
Query: 164 GAEEFLLKP 172
GA + + KP
Sbjct: 302 GANDTITKP 310
>gi|225439773|ref|XP_002275837.1| PREDICTED: two-component response regulator-like APRR7 [Vitis
vinifera]
gi|297741496|emb|CBI32628.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 23/153 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V++ R ++ LLR YQVT +G +A L K
Sbjct: 60 VLLVENDDSTRYVIGALLRNCGYQVTETSNGLQAWRIL-------------------KDT 100
Query: 111 ESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ ++L++T+ +P ++G LL K + + K++PV++MS+ + + V CL +GA +FL
Sbjct: 101 SNHIDLVLTEVNLPRLSGIALLCKIMNHKTRKNIPVIMMSTHDSGALVLKCLSKGATDFL 160
Query: 170 LKPVRLSDLEKLQPRLLKSPNRS---CGNNEDS 199
+KPVR ++L+ L + + + CG+ D+
Sbjct: 161 VKPVRKNELKFLWQHIWRRRQNNGFPCGSKGDT 193
>gi|329922247|ref|ZP_08277949.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
gi|328942284|gb|EGG38554.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Paenibacillus sp. HGF5]
Length = 1049
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/158 (24%), Positives = 79/158 (50%), Gaps = 28/158 (17%)
Query: 23 PQQEREGQ--LEDIPQQEKQPQQQ----QQETFHVLAVDDSLIDRKILENLLRVSSYQVT 76
P++E+E Q + D+ +Q+ + + +L VDD ++ K++ +LL Y++
Sbjct: 687 PEKEKETQSNMSDMHEQDDAESEALALARPSDGRLLIVDDDPVNLKVIHHLLADEGYRIV 746
Query: 77 CVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK 136
V ++AL+ L E+ +LI++D MP M+GY+L + ++
Sbjct: 747 AVTRAEEALQLL---------------------EQGEWDLIISDVMMPQMSGYELSRTIR 785
Query: 137 VSSW-KDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
++P++++++ N P + M GA ++L+KPV
Sbjct: 786 QRYMLSELPILLLTARNRPEDIHMGFISGANDYLIKPV 823
>gi|323139254|ref|ZP_08074308.1| adenylate/guanylate cyclase [Methylocystis sp. ATCC 49242]
gi|322395475|gb|EFX98022.1| adenylate/guanylate cyclase [Methylocystis sp. ATCC 49242]
Length = 539
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 30/155 (19%)
Query: 35 PQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNL 94
P E++ +L VDD+ +R +L+ L + V ++G AL +
Sbjct: 180 PISERETDSAASLPSRILVVDDNASNRDLLKRRLERQGHAVVLAENGSSALAIV------ 233
Query: 95 ENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENV 153
++++ +L++ D MP ++G+D+L LK S +D+PV+++S+ N
Sbjct: 234 ---------------KQAQFDLVLLDLLMPDISGFDVLSILKSDLSLRDIPVIMISALNE 278
Query: 154 PSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
+ C+E GAE++L KP +P LL++
Sbjct: 279 IDTIVRCIEAGAEDYLAKP--------FEPVLLRA 305
>gi|123486693|ref|XP_001324781.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
gi|121907669|gb|EAY12558.1| Response regulator receiver domain containing protein [Trichomonas
vaginalis G3]
Length = 637
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 29/145 (20%)
Query: 45 QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPST 104
+++ H+LAVDD + + L+ Y V+ +G +ALE L
Sbjct: 8 RRDDLHILAVDDDAVQLHAVTKALKSLGYHVSNASNGQEALEVL---------------- 51
Query: 105 LSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
K + +LI++D MP M G L+ + S ++ +P+++MSS + V CL +
Sbjct: 52 ----KSGNTFDLILSDVMMPVMNGPQFLQETRADSRFEQIPIIMMSSNDQYEIVFDCLSK 107
Query: 164 GAEEFLLKPVRLSDLEKLQPRLLKS 188
GA+++++KP L P++LK+
Sbjct: 108 GADDYIIKP--------LTPQVLKN 124
>gi|85859036|ref|YP_461238.1| chemotaxis protein [Syntrophus aciditrophicus SB]
gi|85722127|gb|ABC77070.1| chemotaxis protein [Syntrophus aciditrophicus SB]
Length = 145
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 87/158 (55%), Gaps = 22/158 (13%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQV-TCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
+F+V+ VDDS R ++ ++ +S +++ C+++G+ E + L+D+
Sbjct: 4 SFNVMIVDDSNAMRGVIRKIIAMSGFKMDACLEAGNGK-EAMTLLDS------------- 49
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGA 165
+ V++I++D MP M G +LL RLK +K++PV+++++E R+ GA
Sbjct: 50 -----NWVDVILSDINMPEMNGLELLSRLKQDDLFKEIPVIMITTEGSSPRMEEAFRYGA 104
Query: 166 EEFLLKPVRLSDLEKLQPRLLK-SPNRSCGNNEDSDND 202
+ F+ KP DL+K+ +L + + G++E+ D+D
Sbjct: 105 KGFIKKPFLPGDLKKVLHEVLGVNDDGDYGSDEEGDSD 142
>gi|414165499|ref|ZP_11421746.1| hypothetical protein HMPREF9697_03647 [Afipia felis ATCC 53690]
gi|410883279|gb|EKS31119.1| hypothetical protein HMPREF9697_03647 [Afipia felis ATCC 53690]
Length = 498
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 20/128 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L DD + R++LEN+++ YQ V+SGD A+ L E
Sbjct: 5 ILIADDDAVQRRLLENMVQRCGYQTIVVESGDAAMTVL-------------------ADE 45
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
V+ ++ D MPG+ G +L +++ PVVV ++ V + GA +F++
Sbjct: 46 MRTVDAVVLDLVMPGLDGLGVLSKMREMGLHS-PVVVQTAHGGIDNVVSAMRAGAHDFVV 104
Query: 171 KPVRLSDL 178
KPV + L
Sbjct: 105 KPVGIERL 112
>gi|357010943|ref|ZP_09075942.1| two-component hybrid sensor and regulator [Paenibacillus elgii B69]
Length = 1037
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/134 (26%), Positives = 68/134 (50%), Gaps = 22/134 (16%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
+ ++LAVDD ++ K+L +L Y V V SG +ALE L
Sbjct: 702 DKMNILAVDDDPVNLKVLVGILSTEPYHVRTVSSGQEALELL------------------ 743
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGA 165
+ +L++ D MP M+GY+L +R++ S ++PV+++++ + P+ + GA
Sbjct: 744 ---DTEPWDLLIADVMMPHMSGYELTRRVRTHYSISELPVLLLTARSQPADIYTGFLSGA 800
Query: 166 EEFLLKPVRLSDLE 179
+++ KPV +L+
Sbjct: 801 NDYVTKPVDALELK 814
>gi|332297564|ref|YP_004439486.1| response regulator receiver modulated metal dependent
phosphohydrolase [Treponema brennaborense DSM 12168]
gi|332180667|gb|AEE16355.1| response regulator receiver modulated metal dependent
phosphohydrolase [Treponema brennaborense DSM 12168]
Length = 338
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 21/132 (15%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
F +L DDS R+ L LL +Y VT SG +ALE
Sbjct: 6 FKILCADDSTSIRQYLTGLLTSWNYDVTACASGTEALE--------------------AY 45
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVM-SSENVPSRVTMCLEEGAEE 167
+ S ++++ D+ MPGMTG D+ ++++ + + ++M +S++ + L GA++
Sbjct: 46 RTYSEYSVVLLDWIMPGMTGIDVCRQIRAADKQGYTYIIMLTSKDSTENIVEALNAGADD 105
Query: 168 FLLKPVRLSDLE 179
+L+KP ++L+
Sbjct: 106 YLIKPFHPAELQ 117
>gi|121998005|ref|YP_001002792.1| nitrogen metabolism transcriptional regulator NtrC [Halorhodospira
halophila SL1]
gi|121589410|gb|ABM61990.1| nitrogen metabolism transcriptional regulator, NtrC, Fis Family
[Halorhodospira halophila SL1]
Length = 471
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 69/138 (50%), Gaps = 22/138 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
V VDD R +LE LR S + V +SGD ALE L ++E
Sbjct: 8 VWVVDDDRSIRWVLEKALRRSGHGVRTFESGDAALEAL-------------------RRE 48
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
E ++++TD MPG+ G+DLL++++ S+ +PV+V+++ + E GA E+L
Sbjct: 49 EP--DVLITDLRMPGLGGHDLLQQVQAST-PQLPVIVITAYSDLDAAVSSYEGGAFEYLP 105
Query: 171 KPVRLSDLEKLQPRLLKS 188
KP + + L R + S
Sbjct: 106 KPFDVDEAVDLAGRAIAS 123
>gi|424863675|ref|ZP_18287587.1| nitrogen regulation protein [SAR86 cluster bacterium SAR86A]
gi|400756996|gb|EJP71208.1| nitrogen regulation protein [SAR86 cluster bacterium SAR86A]
Length = 458
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 74/156 (47%), Gaps = 23/156 (14%)
Query: 52 LAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEE 111
+A DD I R +LE L + ++ SGD L ++ E
Sbjct: 6 IADDDEAI-RLVLEESLSSAGFKTKSFSSGDD---------------------LVSELES 43
Query: 112 SRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLK 171
S +LI+TD MPGM GYDLLK + ++++D+PV+VM++ GA E++ K
Sbjct: 44 SEPDLIITDVQMPGMLGYDLLKHI-TNNYEDLPVIVMTAFADMQAAVESFGGGAFEYMPK 102
Query: 172 PVRLSDLEKLQPRLLKSPNRSCGNNEDSDNDNKNET 207
P L D K+ R L+ ++ G +D+ D E+
Sbjct: 103 PFDLEDAIKIVERALEEKPKTKGLKKDTKLDIIGES 138
>gi|374578742|ref|ZP_09651836.1| putative regulator of cell autolysis [Desulfosporosinus youngiae
DSM 17734]
gi|374414824|gb|EHQ87259.1| putative regulator of cell autolysis [Desulfosporosinus youngiae
DSM 17734]
Length = 1020
Score = 60.5 bits (145), Expect = 7e-07, Method: Composition-based stats.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 22/172 (12%)
Query: 10 IPQQEKQQLLENIPQQEREGQLEDIPQQEKQPQQQQ-QETFHVLAVDDSLIDRKILENLL 68
+P + +LLE +P L EK P F +LAVDD + K L N+L
Sbjct: 651 MPLVKDNRLLEALPGNYERYDLSPSLTYEKLPHTVNVGSKFSILAVDDEYSNLKALLNML 710
Query: 69 RVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTG 128
V Y VT + AL L K + +L + D MPGM G
Sbjct: 711 TVCQYNVTVAGNAKSALLLL--------------------KGALQYDLCILDVMMPGMDG 750
Query: 129 YDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLE 179
Y+ ++++ V S ++P+++++++ +P + GA +F+ KP +L+
Sbjct: 751 YEACRKIREVYSPLELPILLLTAKALPDELEAGFRAGANDFIAKPFEARELK 802
>gi|117926946|ref|YP_867563.1| nitrogen metabolism transcriptional regulator, NtrC, Fis family
[Magnetococcus marinus MC-1]
gi|117610702|gb|ABK46157.1| nitrogen metabolism transcriptional regulator, NtrC, Fis Family
[Magnetococcus marinus MC-1]
Length = 504
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 24/146 (16%)
Query: 42 QQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNAS 101
QQ+ ++T +L DD R +LE L + Y+V G L N+ N
Sbjct: 2 QQEAEQT--ILVADDDQAVRFVLEQALSRAGYKVHA----------FGNTQPLVNHFNQY 49
Query: 102 PSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCL 161
+LI+TD MPG +G D+++ LK +++ D+P++VM++++
Sbjct: 50 GG-----------DLIITDVVMPGGSGLDMVQSLK-ATYPDLPIIVMTAQSTLRNAVQAF 97
Query: 162 EEGAEEFLLKPVRLSDLEKLQPRLLK 187
E GA E+L KP ++ L L R L+
Sbjct: 98 ERGAFEYLAKPFDINRLVDLTRRALQ 123
>gi|288573489|ref|ZP_06391846.1| response regulator receiver modulated diguanylate cyclase
[Dethiosulfovibrio peptidovorans DSM 11002]
gi|288569230|gb|EFC90787.1| response regulator receiver modulated diguanylate cyclase
[Dethiosulfovibrio peptidovorans DSM 11002]
Length = 459
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 60/120 (50%), Gaps = 22/120 (18%)
Query: 54 VDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESR 113
V+DSL K LE LLR Y+VT +G LE G P+
Sbjct: 17 VEDSLTQAKRLERLLRSHGYEVTVARNGALGLEMAG---------KVKPT---------- 57
Query: 114 VNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKP 172
+++TD MP M GY++ +++K KD+PVV+++S + P V L+ GA+ FL KP
Sbjct: 58 --VVITDVMMPEMDGYEMCRKIKDDPELKDIPVVILTSLSDPGDVIKGLQCGADNFLTKP 115
>gi|114319182|ref|YP_740865.1| nitrogen metabolism transcriptional regulator NtrC [Alkalilimnicola
ehrlichii MLHE-1]
gi|114225576|gb|ABI55375.1| nitrogen metabolism transcriptional regulator, NtrC, Fis family
[Alkalilimnicola ehrlichii MLHE-1]
Length = 468
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 22/123 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
V VDD R +L+ L + ++VTC D+ ++ L L E
Sbjct: 7 VWVVDDDRSIRWVLQKALERAGFKVTCFDTAERVLRAL---------------------E 45
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++ ++++TD MPG++G DLL ++ W D+PV+VM++ + E GA E+L
Sbjct: 46 RNQPDVLLTDIRMPGVSGLDLLAQVG-DRWPDMPVIVMTAHSDLDAAVASYEGGAFEYLP 104
Query: 171 KPV 173
KP
Sbjct: 105 KPF 107
>gi|302813242|ref|XP_002988307.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
gi|300144039|gb|EFJ10726.1| hypothetical protein SELMODRAFT_447266 [Selaginella moellendorffii]
Length = 508
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 73/133 (54%), Gaps = 21/133 (15%)
Query: 56 DSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVN 115
DS +++ E L R S YQV+ V + + +E L + D S+V+
Sbjct: 22 DSATAQEVKELLCRCS-YQVSVVKTARQVVEVLNITD-------------------SKVD 61
Query: 116 LIMTDYCMPGMTGYDLLKRL-KVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVR 174
L++++ +P G+ +LK + K ++K +P+V+MS+ + + V CL+ GA ++L+KP+R
Sbjct: 62 LVLSEVELPNGRGFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLR 121
Query: 175 LSDLEKLQPRLLK 187
+++L L + +
Sbjct: 122 INELLNLWTHMWR 134
>gi|168701075|ref|ZP_02733352.1| multi-sensor hybrid histidine kinase [Gemmata obscuriglobus UQM
2246]
Length = 1034
Score = 60.1 bits (144), Expect = 7e-07, Method: Composition-based stats.
Identities = 38/157 (24%), Positives = 73/157 (46%), Gaps = 22/157 (14%)
Query: 32 EDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI 91
E +P++E + VL +D+ + +++E LL ++V V G +AL G
Sbjct: 770 ETVPEREPEKPATGARALRVLVAEDNEFNARLVEELLVRRGHRVQVVADGRQALSRAGTN 829
Query: 92 DNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSE 151
D ++++ D MP + G+++++ L+ + +PV+ +++
Sbjct: 830 D---------------------FDVLLLDVHMPELNGFEVVRALRAAG-SQLPVIGLTAR 867
Query: 152 NVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKS 188
+ P CL G ++FL KPVRL DL RL+ +
Sbjct: 868 SRPEDREECLAAGMDDFLTKPVRLPDLLAAMERLVPT 904
>gi|359457111|ref|ZP_09245674.1| response regulator receiver domain-containing protein
[Acaryochloris sp. CCMEE 5410]
Length = 609
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD +R +L L+ Y+V DSG+ ALE + D
Sbjct: 199 LLVVDDVEANRDMLGRRLQRKGYEVVLADSGEAALERIATTD------------------ 240
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ L++ D MPG+ G + LKR++ S +++PV++ ++++ V LE GA +++
Sbjct: 241 ---ITLVLLDIMMPGIGGIETLKRIRQTYSQEELPVIMATAKDASENVVEALELGANDYI 297
Query: 170 LKPVRLS-DLEKLQPRL 185
KP+ L L ++Q L
Sbjct: 298 TKPIDLPVALARIQSHL 314
>gi|115374000|ref|ZP_01461290.1| two-component system response regulator [Stigmatella aurantiaca
DW4/3-1]
gi|115369007|gb|EAU67952.1| two-component system response regulator [Stigmatella aurantiaca
DW4/3-1]
Length = 153
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 17/141 (12%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQ---VTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+L V+D+ D +L+ R +S C D G++ LE+LG
Sbjct: 3 ILVVEDNDEDFDMLQLAFRGASIPNPLFRCAD-GEETLEFLG-----------HQGRYQE 50
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+++ R L++ D +PGM G +L+RLK +S + +PV+V S+ + P V C + G
Sbjct: 51 EEQAPRPGLVLLDLNLPGMDGRQVLERLKADASLRSIPVIVFSTSDNPRDVQSCYQLGVS 110
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+LLKPV L E++ RLLK
Sbjct: 111 AYLLKPVDLDRFERMV-RLLK 130
>gi|339498727|ref|YP_004696762.1| response regulator receiver protein [Spirochaeta caldaria DSM 7334]
gi|338833076|gb|AEJ18254.1| response regulator receiver protein [Spirochaeta caldaria DSM 7334]
Length = 242
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 23/152 (15%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L V+DS + L+ +L + Y + + G +ALE L
Sbjct: 8 HILIVEDSYVQAAGLQKILEQAGYSIVRAEHGLEALELL--------------------- 46
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
++ +L+++D MP M GY L K +K + +K +PV++++S + P+ + +E GA+ F
Sbjct: 47 QKEHFDLVISDVMMPKMDGYTLCKTIKTNELYKHLPVILVTSLSEPADIIRGIESGADSF 106
Query: 169 LLKPVRLSD-LEKLQPRLLKSPNRSCGNNEDS 199
+ KP + LE+++ L G+ S
Sbjct: 107 IPKPYKADFLLERVEAHLAGKIGDPAGDTHSS 138
>gi|413952914|gb|AFW85563.1| putative two-component response regulator family protein [Zea mays]
Length = 669
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 66/137 (48%), Gaps = 21/137 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDD + K+LE LLR Y V + AL+ L ++
Sbjct: 30 VLAVDDDPVCLKVLETLLRRCQYHVITTNQAITALKLL-------------------REN 70
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+L+++D MP M G+ LL+ + + D+PV+++S V + GA ++LL
Sbjct: 71 RDMFDLVISDVHMPDMDGFKLLELVGLE--MDLPVIMLSVNGETKSVMKGITHGACDYLL 128
Query: 171 KPVRLSDLEKLQPRLLK 187
KPVR+ +L + +++
Sbjct: 129 KPVRIEELRNIWQHVVR 145
>gi|302760961|ref|XP_002963903.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
gi|300169171|gb|EFJ35774.1| hypothetical protein SELMODRAFT_438647 [Selaginella moellendorffii]
Length = 505
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 73/133 (54%), Gaps = 21/133 (15%)
Query: 56 DSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVN 115
DS +++ E L R S YQV+ V + + +E L + D S+V+
Sbjct: 22 DSATAQEVKELLCRCS-YQVSVVKTARQVVEVLNITD-------------------SKVD 61
Query: 116 LIMTDYCMPGMTGYDLLKRL-KVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVR 174
L++++ +P G+ +LK + K ++K +P+V+MS+ + + V CL+ GA ++L+KP+R
Sbjct: 62 LVLSEVELPNGRGFKMLKHIVKSENFKHIPIVMMSARDEMAVVVKCLKLGAADYLVKPLR 121
Query: 175 LSDLEKLQPRLLK 187
+++L L + +
Sbjct: 122 INELLNLWTHMWR 134
>gi|119483445|ref|ZP_01618859.1| adenylate cyclase [Lyngbya sp. PCC 8106]
gi|119458212|gb|EAW39334.1| adenylate cyclase [Lyngbya sp. PCC 8106]
Length = 1361
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 23/127 (18%)
Query: 49 FHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
F +L VDD I+ ++L N L + +Y VT SG +A+E L + P
Sbjct: 890 FKILIVDDDPINLQVLVNYLCLQNYAVTQASSGIEAMEIL--------EAGYIP------ 935
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVSSW--KDVPVVVMSSENVPSRVTMCLEEGAE 166
+LI+ D MP MTGY++ +R++ +W +P+++++++N S + LE GA
Sbjct: 936 ------DLILLDVMMPRMTGYEVTRRIR-ETWPPHQLPIMMLTAKNQVSDLVAGLEVGAN 988
Query: 167 EFLLKPV 173
++L KP+
Sbjct: 989 DYLSKPL 995
>gi|193216053|ref|YP_001997252.1| CheA signal transduction histidine kinase [Chloroherpeton thalassium
ATCC 35110]
gi|193089530|gb|ACF14805.1| CheA signal transduction histidine kinase [Chloroherpeton thalassium
ATCC 35110]
Length = 2433
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 22/142 (15%)
Query: 33 DIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLID 92
+I + ++Q ++++ E VLA DDS RK ++++L + V VD G AL
Sbjct: 2299 EIEEPKRQKRKRKGEKITVLAADDSPSVRKYIQSVLHQADIDVVSVDDGLNAL------- 2351
Query: 93 NLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRL-KVSSWKDVPVVVMSSE 151
N P+ + +LI+TD MP M G++L+ + K+S +KD+P++V+++
Sbjct: 2352 ------NKLPT--------ANCDLIITDLEMPRMNGFELVSEVRKLSQYKDIPIIVVTAR 2397
Query: 152 NVPSRVTMCLEEGAEEFLLKPV 173
+E GA FL KP
Sbjct: 2398 AGDKHRRKGIELGANAFLNKPF 2419
>gi|46581622|ref|YP_012430.1| sigma-54 dependent transcriptional regulator/response regulator
[Desulfovibrio vulgaris str. Hildenborough]
gi|387154820|ref|YP_005703756.1| two component Fis family sigma54-specific transcriptional regulator
[Desulfovibrio vulgaris RCH1]
gi|46451045|gb|AAS97690.1| sigma-54 dependent transcriptional regulator/response regulator
[Desulfovibrio vulgaris str. Hildenborough]
gi|311235264|gb|ADP88118.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio vulgaris RCH1]
Length = 459
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
ET H+L +DD +LE LL + Y VT ++ + AL +L
Sbjct: 3 ETTHILVIDDEKNYLLVLEALLTDAGYAVTALNDPETALAFL------------------ 44
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
EES V++++TD MP +TG ++L+R+K +W +PV +M++ ++ GA
Sbjct: 45 ---EESEVDVVITDMKMPRVTGREVLERVK-KTWPHIPVCIMTAFGSIEGAVDVMKYGAF 100
Query: 167 EFLLKP 172
+++ KP
Sbjct: 101 DYITKP 106
>gi|120601219|ref|YP_965619.1| Fis family transcriptional regulator [Desulfovibrio vulgaris DP4]
gi|120561448|gb|ABM27192.1| two component, sigma54 specific, transcriptional regulator, Fis
family [Desulfovibrio vulgaris DP4]
Length = 459
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLS 106
ET H+L +DD +LE LL + Y VT ++ + AL +L
Sbjct: 3 ETTHILVIDDEKNYLLVLEALLTDAGYAVTALNDPETALAFL------------------ 44
Query: 107 TKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
EES V++++TD MP +TG ++L+R+K +W +PV +M++ ++ GA
Sbjct: 45 ---EESEVDVVITDMKMPRVTGREVLERVK-KTWPHIPVCIMTAFGSIEGAVDVMKYGAF 100
Query: 167 EFLLKP 172
+++ KP
Sbjct: 101 DYITKP 106
>gi|297568710|ref|YP_003690054.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfurivibrio alkaliphilus AHT2]
gi|296924625|gb|ADH85435.1| response regulator receiver modulated metal dependent
phosphohydrolase [Desulfurivibrio alkaliphilus AHT2]
Length = 530
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 62/124 (50%), Gaps = 22/124 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD +R++L LR Y V ++G +AL L E
Sbjct: 171 ILVVDDITANREVLSRRLRRLGYLVMEAENGRQALAML---------------------E 209
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+L++ D MP + GY++L+R+K + + VPV+++S+ + V CLE GA+++L
Sbjct: 210 TGAFDLVLLDILMPELDGYEVLRRIKANELIRHVPVLMISAVGDINSVVRCLEAGADDYL 269
Query: 170 LKPV 173
KP
Sbjct: 270 AKPF 273
>gi|87309080|ref|ZP_01091217.1| sensory box sensor histidine kinase/response regulator
[Blastopirellula marina DSM 3645]
gi|87288071|gb|EAQ79968.1| sensory box sensor histidine kinase/response regulator
[Blastopirellula marina DSM 3645]
Length = 1013
Score = 60.1 bits (144), Expect = 9e-07, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 73/151 (48%), Gaps = 24/151 (15%)
Query: 30 QLEDIPQQEKQPQQQ--QQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEY 87
Q +I ++K P Q VL +D I+R ++EN+L +++T V+ G AL+
Sbjct: 730 QAGEITARKKAPPNGSLQFAGVRVLVAEDGPINRLLVENMLAPLGFELTFVEDGQMALQ- 788
Query: 88 LGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVV 147
+ EESR ++I+ D MP + GY +RL+ + +VP++
Sbjct: 789 --------------------RFEESRFDVILMDMQMPVLDGYAASERLRATGC-EVPIIA 827
Query: 148 MSSENVPSRVTMCLEEGAEEFLLKPVRLSDL 178
M++ + S CL+ G +++ KPV L +
Sbjct: 828 MTAHAMASDRRKCLDSGCNDYISKPVMLEQM 858
>gi|281308384|gb|ADA58340.1| pseudo-response regulator 3 [Brassica rapa]
Length = 492
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 104/233 (44%), Gaps = 61/233 (26%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL V++ R I+ LL+ SY+VT V LE ++++
Sbjct: 63 SLKVLLVENDDSTRHIVTALLKNCSYEVTAVPD---VLEAWKVLED-------------- 105
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
E S ++L++T+ MP +G LL + + + K++PV++MSS + V CL GA
Sbjct: 106 --ENSCIDLVLTEVVMPVNSGTGLLSKIMSHQTLKNIPVIMMSSHDSMVLVFKCLSNGAV 163
Query: 167 EFLLKPVRLSDLEKLQPRL---------------------LKSPNRSCGNNED---SDND 202
+FL+KP+R ++L+ L + +K+ + G+ +D SD D
Sbjct: 164 DFLVKPIRKNELKNLWQHVWRRCHSSSGSGSESGIHNKKSVKTESTDEGSEDDASMSDED 223
Query: 203 NKNE------------TSNYKSSTNSAFSKRK-----ALSAEAPERRPKMKEV 238
N N+ S++ S T S+++KR ER K+KEV
Sbjct: 224 NGNDDNGSNGLSNGEGGSDHGSGTQSSWTKRASDVNVGTYGNECERLKKLKEV 276
>gi|209523399|ref|ZP_03271954.1| histidine kinase [Arthrospira maxima CS-328]
gi|209496141|gb|EDZ96441.1| histidine kinase [Arthrospira maxima CS-328]
Length = 728
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 16/143 (11%)
Query: 32 EDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLI 91
E I + + P+ Q + +L V+D + ++ ++ +L + Y+V + G L+ +
Sbjct: 586 EVITPEPETPKLHQVDCPRILVVEDQIFNQLLITEVLELEGYEVELIADGYTMLDMI--- 642
Query: 92 DNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSS 150
N++ A P L +LI+ D +P + G++L++RLK SS WK VPVV +++
Sbjct: 643 ----NSTLAKPELLP--------DLILMDIQLPEVDGFELIRRLKQSSLWKVVPVVAVTA 690
Query: 151 ENVPSRVTMCLEEGAEEFLLKPV 173
+ CL GA+ +L KP+
Sbjct: 691 MVMSGDRERCLAAGADGYLSKPL 713
>gi|88706905|ref|ZP_01104604.1| Adenylyl cyclase class-3/4/guanylyl cyclase [Congregibacter
litoralis KT71]
gi|88698827|gb|EAQ95947.1| Adenylyl cyclase class-3/4/guanylyl cyclase [Congregibacter
litoralis KT71]
Length = 495
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 63/124 (50%), Gaps = 22/124 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
+LAVDD +R +L L S + V SG++ALE L +NA
Sbjct: 142 FILAVDDREENRALLARYLTRSGHFVVTAPSGEEALEML---------ANAD-------- 184
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
V++++ D MPGM G ++L+R+K + PV+++S E + C++ GA+++
Sbjct: 185 ----VDVVLLDRMMPGMDGREVLRRIKAEPRLRATPVIMISGEQDMQGIIECIKAGADDY 240
Query: 169 LLKP 172
L KP
Sbjct: 241 LFKP 244
>gi|443315090|ref|ZP_21044601.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
gi|442785303|gb|ELR95132.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Leptolyngbya sp. PCC 6406]
Length = 122
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 71/139 (51%), Gaps = 21/139 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+DS+ R+++ LLR S VT G +ALE++ S P
Sbjct: 4 VLVVEDSIPQREMITELLRGSGLDVTAASDGVEALEHI--------QSGHPP-------- 47
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+L++ D MP M GY+L +RLK S +DVPVV+ SS+ +++GA+ ++
Sbjct: 48 ----DLVVLDIVMPRMNGYELCRRLKADPSTQDVPVVMCSSKGEEFDRYWGMKQGADAYI 103
Query: 170 LKPVRLSDLEKLQPRLLKS 188
KP + ++L +LL+
Sbjct: 104 AKPFQPTELVGTVKQLLRG 122
>gi|297566255|ref|YP_003685227.1| response regulator receiver protein [Meiothermus silvanus DSM 9946]
gi|296850704|gb|ADH63719.1| response regulator receiver protein [Meiothermus silvanus DSM 9946]
Length = 122
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 66/123 (53%), Gaps = 22/123 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
V+ VDDS+ D K E++L +S++V S + +E +S+K
Sbjct: 4 VMIVDDSMADLKYAESILTAASHRVMLCPSSE----------GIEQQ------VISSKP- 46
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++I+ D MPG +GY++L+ L+ KD+PVVV+SS+ P+ + +GA E+L
Sbjct: 47 ----DVILLDIVMPGRSGYEILRSLRRTEGAKDIPVVVISSKGQPTDIEWGKRQGAAEYL 102
Query: 170 LKP 172
+KP
Sbjct: 103 VKP 105
>gi|407715117|ref|YP_006835682.1| two-component system, chemotaxis family, response regulator CheY
[Burkholderia phenoliruptrix BR3459a]
gi|407237301|gb|AFT87500.1| two-component system, chemotaxis family, response regulator CheY
[Burkholderia phenoliruptrix BR3459a]
Length = 125
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 22/125 (17%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+LA+DDS R+IL L + Y+VT G + LE N+ A
Sbjct: 4 HILAIDDSASMRQILSATLTAAGYEVTLAADGAEGLE----------NALA--------- 44
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
R +L++TD MPG TG DL+ L+ + ++ + P++V+++E+ + E GA +
Sbjct: 45 --VRFDLVLTDQHMPGKTGLDLIAELRGNPAYAETPILVLTTESGDAFKAAAREAGATGW 102
Query: 169 LLKPV 173
+ KP+
Sbjct: 103 IEKPL 107
>gi|378827437|ref|YP_005190169.1| putative sigma-54 dependent DNA-binding response regulator
[Sinorhizobium fredii HH103]
gi|365180489|emb|CCE97344.1| putative sigma-54 dependent DNA-binding response regulator
[Sinorhizobium fredii HH103]
Length = 514
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 60/126 (47%), Gaps = 20/126 (15%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T H+L +DD + R++L N+ +E LG +++L +N + L
Sbjct: 2 TSHILVIDDDPVQRRLLTNM-----------------IERLGHVEHLADNGRSGLELLER 44
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
K +N+I+ D MP M G+ L+ L D PV+V + + V ++ GA +
Sbjct: 45 KG--GMINVILLDLLMPEMNGHGFLEAL-AERGIDTPVIVQTGQGGIETVVGAMQAGAFD 101
Query: 168 FLLKPV 173
FL+KPV
Sbjct: 102 FLVKPV 107
>gi|449144060|ref|ZP_21774878.1| Signal transduction histidine kinase [Vibrio mimicus CAIM 602]
gi|449080384|gb|EMB51300.1| Signal transduction histidine kinase [Vibrio mimicus CAIM 602]
Length = 574
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 79/160 (49%), Gaps = 30/160 (18%)
Query: 39 KQPQQQ----QQETF----HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL 90
K+P+ Q QQ T H+L V+D+ ++ +++ LL Y VT ++G +A+E L
Sbjct: 434 KRPKDQVTYLQQSTIAKNHHILVVEDTKTNQMVIQLLLNKMGYDVTIAENGLEAIELL-- 491
Query: 91 IDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSS 150
E N+NA +L++ D MP M G ++++ S D+P++ +++
Sbjct: 492 ----EKNNNA-------------FDLVLMDISMPIMDGIMATRKIR-SQDIDIPIIALTA 533
Query: 151 ENVPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSPN 190
S C++ G + +LKP+R D+ + R L PN
Sbjct: 534 HTAGSDKQNCIDAGMNDIVLKPIRSKDIMNVVNRFL--PN 571
>gi|47565087|ref|ZP_00236130.1| sensory box sensor histidine kinase/response regulator VC0622
[Bacillus cereus G9241]
gi|47557873|gb|EAL16198.1| sensory box sensor histidine kinase/response regulator VC0622
[Bacillus cereus G9241]
Length = 1018
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 88/171 (51%), Gaps = 26/171 (15%)
Query: 10 IPQQEKQQLLENIPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLR 69
+P E++++L I +E ++ ++ Q E + + +LAVDD I+ K+L+++L
Sbjct: 654 LPLAEREEML--IVSKETIEKVVELKQVEMKDNRVGNRK-RILAVDDDPINLKVLKSILP 710
Query: 70 VSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGY 129
Y++ V +G + LE L N+E ++I+ D MP M+GY
Sbjct: 711 QDEYELETVTTGREVLERL----NME------------------WDMILVDVMMPKMSGY 748
Query: 130 DLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLE 179
+L K ++ S ++P+V++++ + P + GA ++++KP+ +L+
Sbjct: 749 ELTKMIRTQYSIAELPIVLLTARSQPEDIYTGFLAGANDYIVKPIDALELK 799
>gi|427707208|ref|YP_007049585.1| response regulator receiver protein [Nostoc sp. PCC 7107]
gi|427359713|gb|AFY42435.1| response regulator receiver protein [Nostoc sp. PCC 7107]
Length = 149
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 76/133 (57%), Gaps = 14/133 (10%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQ--VTCVDSGDKALEYLGLIDNLENNSNASPSTLSTK 108
+L V+DS D K+L+ L+R + Q + +GD+ L+ L + S+ +P+++ T
Sbjct: 9 LLVVEDSNEDFKVLQRLMRRLAVQNPIYRCTNGDEVLDLL-----YQEESSQNPNSIPTP 63
Query: 109 KEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
++I+ D +PG+ G D+L+RLK K +P+VV ++ + P + C ++GA
Sbjct: 64 ------SVILLDLNLPGIDGRDILERLKQDMCLKKIPIVVFTTSSNPKDIEFCYQKGANG 117
Query: 168 FLLKPVRLSDLEK 180
+L+KP+ +L+K
Sbjct: 118 YLVKPMDAQELQK 130
>gi|238760198|ref|ZP_04621344.1| Sensor kinase protein rcsC [Yersinia aldovae ATCC 35236]
gi|238701577|gb|EEP94148.1| Sensor kinase protein rcsC [Yersinia aldovae ATCC 35236]
Length = 955
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 18 LLENIPQQER--EGQ--LEDIPQQ--EKQPQQQQQETFHVLAVDDSLIDRKILENLLRVS 71
LLE IP +R GQ E P Q + Q H+L VDD I+R++L + L
Sbjct: 796 LLEIIPLLDRILLGQHPTETTPLQLPASKTDQADNADLHILVVDDHPINRRLLADQLTAL 855
Query: 72 SYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDL 131
YQV + G AL L N+N V++++TD MP M GY L
Sbjct: 856 GYQVITANDGLDALAVL--------NANT-------------VDIVLTDVNMPNMDGYRL 894
Query: 132 LKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKL 181
+RL+ + PV+ +++ + C+E G + L KPV L L ++
Sbjct: 895 TQRLRQLN-HHFPVIGVTANALAEGKQRCIEAGMDNCLSKPVTLDTLRQM 943
>gi|428776207|ref|YP_007167994.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Halothece sp. PCC 7418]
gi|428690486|gb|AFZ43780.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Halothece sp. PCC 7418]
Length = 578
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 66/129 (51%), Gaps = 22/129 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD + ++ENLL YQ+ G ALE L
Sbjct: 11 ILIVDDDPDNYDVIENLLYAQDYQLYYAQEGKIALEQL---------------------R 49
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E +++LI+ D MP M G +L + +K +++ VP++++++ N ++ CLE GA++F+
Sbjct: 50 EVKIDLILLDLMMPEMDGLELCQIIKRDRAYQGVPIIMVTALNTTVNLSQCLEAGADDFI 109
Query: 170 LKPVRLSDL 178
KP+ ++L
Sbjct: 110 GKPLNGTEL 118
>gi|262171619|ref|ZP_06039297.1| hypothetical protein VII_002442 [Vibrio mimicus MB-451]
gi|261892695|gb|EEY38681.1| hypothetical protein VII_002442 [Vibrio mimicus MB-451]
Length = 1325
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L V+D+ +++++ LL + VT ++G +ALE K E
Sbjct: 994 LLLVEDNEVNQEVALGLLEETGLSVTIANNGQEALE---------------------KLE 1032
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +L++ D MP M G K ++ + WK++P+V M++ + + + CL+ G L
Sbjct: 1033 NADFDLVLMDMQMPVMDGITATKHIRTNGRWKNLPIVAMTANAMAADIERCLQVGMNGHL 1092
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD 200
KP+ + ++ + LKS N + NN D
Sbjct: 1093 SKPIEVDKFYQVLKQFLKSTNTAPQNNHTID 1123
Score = 40.4 bits (93), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 21/92 (22%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD+ R IL++LL + V V +G +AL L +
Sbjct: 854 VLVVDDNDSARNILDSLLTAMRFNVVTVSNGFEALSEL---------------------Q 892
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKD 142
+++ D+ MPGM G +LL R+K +D
Sbjct: 893 HKPFDMLFADWNMPGMNGIELLTRVKSLGLRD 924
>gi|444919622|ref|ZP_21239622.1| hypothetical protein D187_03444 [Cystobacter fuscus DSM 2262]
gi|444708174|gb|ELW49267.1| hypothetical protein D187_03444 [Cystobacter fuscus DSM 2262]
Length = 554
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD R L LL S YQV C SG +ALE L S S
Sbjct: 15 VLVVDDEEQVRTFLAELLGSSGYQVRCASSGAQALEML---------SGGS--------- 56
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++++ D MP M+G D+L+R + S PV+V+S+ + ++ GA ++L
Sbjct: 57 ---FDVVLLDVMMPEMSGLDVLRRYRASG-GSAPVIVLSALSGADDAMRAMKLGASDYLS 112
Query: 171 KPVRLSDLEKLQPRLL 186
KP +LE R L
Sbjct: 113 KPFGGDELEDALARAL 128
>gi|332162345|ref|YP_004298922.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325666575|gb|ADZ43219.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330860455|emb|CBX70762.1| sensor kinase protein rcsC [Yersinia enterocolitica W22703]
Length = 932
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 28/170 (16%)
Query: 18 LLENIPQQER----EGQLEDIPQQEKQPQQQQQET--FHVLAVDDSLIDRKILENLLRVS 71
LLE IP + + +ED P P+ E H+L VDD I+R++L + L
Sbjct: 773 LLEIIPLLDHILLDQQVVEDTPLALPAPKTNLDENADLHILVVDDHPINRRLLADQLTAL 832
Query: 72 SYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDL 131
Y+V + G AL L N+N+ V++++TD MP M GY L
Sbjct: 833 GYRVITANDGLDALAVL--------NTNS-------------VDIVLTDVNMPNMDGYRL 871
Query: 132 LKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKL 181
RL+ + + PV+ +++ + C+E G + L KPV L L ++
Sbjct: 872 THRLRELN-HNFPVIGVTANALAESKLRCIEAGMDNCLSKPVTLDTLRQM 920
>gi|449143910|ref|ZP_21774729.1| hypothetical protein D908_03252 [Vibrio mimicus CAIM 602]
gi|449080441|gb|EMB51356.1| hypothetical protein D908_03252 [Vibrio mimicus CAIM 602]
Length = 1325
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L V+D+ +++++ LL + VT ++G +ALE K E
Sbjct: 994 LLLVEDNEVNQEVALGLLEETGLSVTIANNGQEALE---------------------KLE 1032
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +L++ D MP M G K ++ + WK++P+V M++ + + + CL+ G L
Sbjct: 1033 NADFDLVLMDMQMPVMDGITATKHIRTNGRWKNLPIVAMTANAMAADIERCLQVGMNGHL 1092
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD 200
KP+ + ++ + LKS N + NN D
Sbjct: 1093 SKPIEVDKFYQVLKQFLKSTNTAPQNNHTID 1123
Score = 40.4 bits (93), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 21/92 (22%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD+ R IL++LL + V V +G +AL L +
Sbjct: 854 VLVVDDNDSARNILDSLLTAMRFNVVTVSNGFEALSEL---------------------Q 892
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKD 142
+++ D+ MPGM G +LL R+K +D
Sbjct: 893 HKPFDMLFVDWNMPGMNGIELLTRVKSLGLRD 924
>gi|258621553|ref|ZP_05716586.1| Signal transduction histidine-protein kinase barA [Vibrio mimicus
VM573]
gi|258586171|gb|EEW10887.1| Signal transduction histidine-protein kinase barA [Vibrio mimicus
VM573]
Length = 1325
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L V+D+ +++++ LL + VT ++G +ALE K E
Sbjct: 994 LLLVEDNEVNQEVALGLLEETGLSVTIANNGQEALE---------------------KLE 1032
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +L++ D MP M G K ++ + WK++P+V M++ + + + CL+ G L
Sbjct: 1033 NADFDLVLMDMQMPVMDGITATKHIRTNGRWKNLPIVAMTANAMAADIERCLQVGMNGHL 1092
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD 200
KP+ + ++ + LKS N + NN D
Sbjct: 1093 SKPIEVDKFYQVLKQFLKSTNTAPQNNHTID 1123
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 21/92 (22%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD+ R IL++LL + V V +G +AL L +
Sbjct: 854 VLVVDDNDSARNILDSLLTAMRFNVVTVSNGFEALSEL---------------------Q 892
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKD 142
+++ D+ MPGM G +LL R+K +D
Sbjct: 893 HKPFDMLFADWNMPGMNGIELLTRVKSLGLRD 924
>gi|373951543|ref|ZP_09611504.1| response regulator receiver modulated serine phosphatase
[Shewanella baltica OS183]
gi|373888143|gb|EHQ17035.1| response regulator receiver modulated serine phosphatase
[Shewanella baltica OS183]
Length = 412
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 34/146 (23%)
Query: 44 QQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPS 103
QQ E VL V+D+ +R + NLLR + V +S AL YL
Sbjct: 9 QQPEILSVLVVEDTESERLFICNLLRQFGWLVESCNSAYAALAYL--------------- 53
Query: 104 TLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVP--VVVMSSENVPSRVTMCL 161
+ S V+++++D+ MPGMTG +L + LK ++P V+++++ N + + + +
Sbjct: 54 ------KHSSVHVVISDWRMPGMTGIELCQILKNV---NLPPFVILLTANNQTADIVLGI 104
Query: 162 EEGAEEFLLKPVRLSDLEKLQPRLLK 187
E GA++F+ KP P LLK
Sbjct: 105 EAGADDFICKP--------FNPALLK 122
>gi|258627567|ref|ZP_05722344.1| Signal transduction histidine-protein kinase barA [Vibrio mimicus
VM603]
gi|258580149|gb|EEW05121.1| Signal transduction histidine-protein kinase barA [Vibrio mimicus
VM603]
Length = 1325
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L V+D+ +++++ LL + VT ++G +ALE K E
Sbjct: 994 LLLVEDNEVNQEVALGLLEETGLSVTIANNGQEALE---------------------KLE 1032
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ +L++ D MP M G K ++ + WK++P+V M++ + + + CL+ G L
Sbjct: 1033 NADFDLVLMDMQMPVMDGITATKHIRTNGRWKNLPIVAMTANAMAADIERCLQVGMNGHL 1092
Query: 170 LKPVRLSDLEKLQPRLLKSPNRSCGNNEDSD 200
KP+ + ++ + LKS N + NN D
Sbjct: 1093 SKPIEVDKFYQVLKQFLKSTNTAPQNNHTID 1123
Score = 40.4 bits (93), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 21/92 (22%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD+ R IL++LL + V V +G +AL L +
Sbjct: 854 VLVVDDNDSARNILDSLLTAMRFNVVTVSNGFEALSEL---------------------Q 892
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKD 142
+++ D+ MPGM G +LL R+K +D
Sbjct: 893 HKPFDMLFADWNMPGMNGIELLTRVKSLGLRD 924
>gi|406878982|gb|EKD27734.1| hypothetical protein ACD_79C00600G0002 [uncultured bacterium]
Length = 326
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 36/166 (21%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
++ +DD L + +LE +L Y+V V G +AL+++ +
Sbjct: 7 IMCIDDELANLALLEAILTSHDYKVIMVSDGKEALKHI---------------------K 45
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSW-KDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E V+L++ D MP M GY + K+LK + +PV++++S L+ GA++F+
Sbjct: 46 ERNVDLVLLDIMMPEMDGYSICKKLKEDEITRHIPVIIITSLTSKKEKITALKAGADDFV 105
Query: 170 LKP-------VRLSDLEKLQ------PRLLKSPNRSC-GNNEDSDN 201
KP VR++ L K++ L+ S R+ N+ED+ N
Sbjct: 106 SKPFDQTELLVRIATLLKMREGEEAYSYLIHSLARAAEANDEDTGN 151
>gi|18424319|ref|NP_568919.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|334188506|ref|NP_001190574.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|52783244|sp|Q9LVG4.1|APRR3_ARATH RecName: Full=Two-component response regulator-like APRR3; AltName:
Full=Pseudo-response regulator 3
gi|8777349|dbj|BAA96939.1| unnamed protein product [Arabidopsis thaliana]
gi|10281008|dbj|BAB13744.1| pseudo-response regulator 3 [Arabidopsis thaliana]
gi|225879138|dbj|BAH30639.1| hypothetical protein [Arabidopsis thaliana]
gi|332009893|gb|AED97276.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
gi|332009894|gb|AED97277.1| two-component response regulator-like APRR3 [Arabidopsis thaliana]
Length = 495
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 20/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL V++ R I+ LL+ SY+VT V LE ++++
Sbjct: 63 SLKVLLVENDDSTRHIVTALLKNCSYEVTAVPD---VLEAWRILED-------------- 105
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
E+S ++L++T+ MP +G LL + + + K++PV++MSS + V CL GA
Sbjct: 106 --EKSCIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAV 163
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+FL+KP+R ++L+ L + +
Sbjct: 164 DFLVKPIRKNELKNLWQHVWR 184
>gi|423064585|ref|ZP_17053375.1| histidine kinase [Arthrospira platensis C1]
gi|406713828|gb|EKD08996.1| histidine kinase [Arthrospira platensis C1]
Length = 728
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 15 KQQLLENI-PQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSY 73
+Q+L +N P+ ER+ E I + + P+ + + +L V+D L ++ ++ +L + Y
Sbjct: 571 RQELAKNYNPEPERQ---EVITPEPETPKLHKVDCPRILVVEDQLFNQLLITEVLELEGY 627
Query: 74 QVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLK 133
+V + G L+ + N++ A P L +LI+ D +P + G++L++
Sbjct: 628 EVELIADGYTMLDMI-------NSTLAKPELLP--------DLILMDIQLPEVDGFELIR 672
Query: 134 RLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPV 173
+LK SS WK VPVV +++ + CL GA+ +L KP+
Sbjct: 673 QLKQSSLWKVVPVVAVTAMVMSGDRERCLAAGADGYLSKPL 713
>gi|255568149|ref|XP_002525050.1| Two-component response regulator ARR2, putative [Ricinus communis]
gi|223535631|gb|EEF37297.1| Two-component response regulator ARR2, putative [Ricinus communis]
Length = 659
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 79/155 (50%), Gaps = 29/155 (18%)
Query: 113 RVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLK 171
++LI+++ MP ++G LL K + + K++PV++MSS + + V CL +GA +FL+K
Sbjct: 22 HIDLILSEVAMPCLSGIGLLCKIMNHRTCKNIPVIMMSSHDSMNVVFKCLSKGALDFLVK 81
Query: 172 PVRLSDLEKLQPRLLK--------------------SPNRSCGNNEDSDND-------NK 204
P+R ++L+ L + + SP S N +D D N
Sbjct: 82 PIRKNELKNLWQHVWRKCHSSSGSGSESDIRTRKSTSPEESDNNTGSNDEDDIGSTGLNA 141
Query: 205 NETSNYKSSTNSAFSKRKALSAEAPERRPKMKEVA 239
+ S++ S T S+++KR A+ ++P+ +VA
Sbjct: 142 RDGSDHGSGTQSSWTKR-AIEVDSPKLMSPWNQVA 175
>gi|443476008|ref|ZP_21065934.1| multi-sensor hybrid histidine kinase, partial [Pseudanabaena biceps
PCC 7429]
gi|443019063|gb|ELS33214.1| multi-sensor hybrid histidine kinase, partial [Pseudanabaena biceps
PCC 7429]
Length = 862
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 65/140 (46%), Gaps = 26/140 (18%)
Query: 50 HVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKK 109
H+L VDD +R +L NLL + T ++G K +E K
Sbjct: 702 HLLVVDDRWENRAVLMNLLEPLGFTFTEAENGKKGIE---------------------KA 740
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLK---VSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
+E +LI+TD MP M G+++LK+L+ W V V S + +++ LE G +
Sbjct: 741 KEQSFDLIVTDLAMPVMDGFEMLKKLRNDEALKWLRVIVSSASVSEIDRQIS--LEAGGD 798
Query: 167 EFLLKPVRLSDLEKLQPRLL 186
+FL KPV +L L + L
Sbjct: 799 DFLAKPVHAEELFDLLAKHL 818
>gi|228954946|ref|ZP_04116963.1| hypothetical protein bthur0006_43110 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|423426802|ref|ZP_17403833.1| hypothetical protein IE5_04491 [Bacillus cereus BAG3X2-2]
gi|423502646|ref|ZP_17479238.1| hypothetical protein IG1_00212 [Bacillus cereus HD73]
gi|449091633|ref|YP_007424074.1| hypothetical protein HD73_4975 [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|228804673|gb|EEM51275.1| hypothetical protein bthur0006_43110 [Bacillus thuringiensis
serovar kurstaki str. T03a001]
gi|401110368|gb|EJQ18277.1| hypothetical protein IE5_04491 [Bacillus cereus BAG3X2-2]
gi|402459885|gb|EJV91613.1| hypothetical protein IG1_00212 [Bacillus cereus HD73]
gi|449025390|gb|AGE80553.1| hypothetical protein HD73_4975 [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 1018
Score = 59.7 bits (143), Expect = 1e-06, Method: Composition-based stats.
Identities = 42/171 (24%), Positives = 88/171 (51%), Gaps = 26/171 (15%)
Query: 10 IPQQEKQQLLENIPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLR 69
+P E++++L I +E ++ ++ Q E + + +LAVDD I+ K+L+++L
Sbjct: 654 LPLAEREEML--IVSKETIEKVVELKQVEMKDNRVGNRR-RILAVDDDPINLKVLKSILP 710
Query: 70 VSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGY 129
Y++ V +G + LE L N+E ++I+ D MP M+GY
Sbjct: 711 QDEYELETVTTGREVLERL----NME------------------WDMILVDVMMPKMSGY 748
Query: 130 DLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLE 179
+L K ++ S ++P+V++++ + P + GA ++++KP+ +L+
Sbjct: 749 ELTKMIRTQYSIAELPIVLLTARSQPEDIYTGFLAGANDYIVKPIDALELK 799
>gi|255539557|ref|XP_002510843.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
gi|223549958|gb|EEF51445.1| two-component system sensor histidine kinase/response regulator,
putative [Ricinus communis]
Length = 754
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 65/141 (46%), Gaps = 21/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T +L VDD I+ ++L+ S QV V + AL L
Sbjct: 20 TVQILIVDDDAPTLGIVSSMLKTCSLQVVTVKNPLDALSSL------------------- 60
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+ + +L++TD MPGM G L K++ +PVV+MSS+ S + LE GA
Sbjct: 61 QSSDGAFDLVITDLHMPGMNGIQLQKQIDEE--FKIPVVIMSSDGKRSAILESLESGAVY 118
Query: 168 FLLKPVRLSDLEKLQPRLLKS 188
+++KPV L DL+ + + S
Sbjct: 119 YMVKPVNLRDLKNVWQYAMAS 139
>gi|67005935|gb|AAY62604.1| pseudo response regulator 3 [Arabidopsis thaliana]
Length = 495
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 74/141 (52%), Gaps = 20/141 (14%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
+ VL V++ R I+ LL+ SY+VT V LE ++++
Sbjct: 63 SLKVLLVENDDSTRHIVTALLKNCSYEVTAVPD---VLEAWRILED-------------- 105
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKR-LKVSSWKDVPVVVMSSENVPSRVTMCLEEGAE 166
E+S ++L++T+ MP +G LL + + + K++PV++MSS + V CL GA
Sbjct: 106 --EKSCIDLVLTEVDMPVHSGTGLLSKIMSHKTLKNIPVIMMSSHDSMVLVFKCLSNGAV 163
Query: 167 EFLLKPVRLSDLEKLQPRLLK 187
+FL+KP+R ++L+ L + +
Sbjct: 164 DFLVKPIRKNELKNLWQHVWR 184
>gi|449448936|ref|XP_004142221.1| PREDICTED: two-component response regulator-like APRR7-like
[Cucumis sativus]
Length = 797
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 104/217 (47%), Gaps = 57/217 (26%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V++ R ++ LL SY+V +G L ++++L N+
Sbjct: 91 VLLVENDDSTRHLVTALLCNCSYEVIAAANG---LHAWKMLEDLTNH------------- 134
Query: 111 ESRVNLIMTDYCMPGMTGYDLL-KRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++L++T+ MP ++G LL K + + K++PV++MSS + V CL +GA +FL
Sbjct: 135 ---IDLVLTEVVMPCLSGIGLLCKIMNHKTRKNIPVIMMSSHDSMGLVFKCLSKGAVDFL 191
Query: 170 LKPVRLSDLEKLQPRLL---------------------------KSPNRSCGNNEDSDND 202
+KP+R ++L+ L + KS N + G+N+D + D
Sbjct: 192 VKPIRKNELKNLWQHVWRRCHSSSGSGSESGTQTQKSVKSKSVEKSDNNT-GSNDDEEED 250
Query: 203 NKN------ETSNYKSSTNSAFSKRKALSAEAPERRP 233
N++ + S+ S T S+++K +A+ E+P RP
Sbjct: 251 NESIGFNIADGSDDGSGTQSSWTK-QAIEVESP--RP 284
>gi|39996418|ref|NP_952369.1| response regulator sensor, GAF domain-containing [Geobacter
sulfurreducens PCA]
gi|409911851|ref|YP_006890316.1| response regulator sensor, GAF domain-containing [Geobacter
sulfurreducens KN400]
gi|39983298|gb|AAR34692.1| response regulator sensor, GAF domain-containing [Geobacter
sulfurreducens PCA]
gi|298505427|gb|ADI84150.1| response regulator sensor, GAF domain-containing [Geobacter
sulfurreducens KN400]
Length = 324
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 77/174 (44%), Gaps = 53/174 (30%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VD+S R + + L Y VT V SG++A+ + NA+P
Sbjct: 9 VLVVDESAPSRAFIASTLENGGYIVTSVASGEEAV----------HEVNAAP-------- 50
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++++TD +PGM+G +LLK LK S+ D+ VV+++S L GA +F++
Sbjct: 51 ---FDILVTDINLPGMSGLNLLKLLK-DSFPDLEVVIVTSNASSFTAIKALRLGAYDFII 106
Query: 171 KPV------------------------RLSDLEKLQPR-------LLKSPNRSC 193
KPV RL D KL+ R L+KS NR C
Sbjct: 107 KPVDDPAILTNIVGRAVEKQSLTRENRRLMDDMKLKNRELHDALHLMKSANRLC 160
>gi|227823368|ref|YP_002827340.1| sigma-54 dependent DNA-binding response regulator [Sinorhizobium
fredii NGR234]
gi|227342369|gb|ACP26587.1| sigma-54 dependent DNA-binding response regulator [Sinorhizobium
fredii NGR234]
Length = 514
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 20/126 (15%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T H+L +DD + R++L N++ + D+G LE L
Sbjct: 2 TSHILVIDDDPVQRRLLTNMIERLGHVAHLADNGRSGLELL------------------- 42
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEE 167
+++ +N+I+ D MP M G+ L+ L D PV+V + + V ++ GA +
Sbjct: 43 ERKGGMINVILLDLLMPEMNGHGFLEAL-AERGIDTPVIVQTGQGGIETVVQAMQAGAFD 101
Query: 168 FLLKPV 173
FL+KPV
Sbjct: 102 FLVKPV 107
>gi|365538856|ref|ZP_09364031.1| two-component response regulator [Vibrio ordalii ATCC 33509]
Length = 324
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 59/123 (47%), Gaps = 21/123 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD +DR L L+ + V V SG AL+ D P
Sbjct: 10 ILLVDDVQLDRMQLTIRLKQLGHHVESVASGQAALDIYRKFD---------P-------- 52
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
LI+ D MPGM G++L K++++ + VP++ +S + PS + +E G +++L
Sbjct: 53 ----ELILMDISMPGMNGFELSKKIRLQHHEWVPIIFLSGHDEPSMIAKAIEAGGDDYLT 108
Query: 171 KPV 173
KPV
Sbjct: 109 KPV 111
>gi|146301103|ref|YP_001195694.1| response regulator receiver protein [Flavobacterium johnsoniae
UW101]
gi|146155521|gb|ABQ06375.1| response regulator receiver protein [Flavobacterium johnsoniae
UW101]
Length = 168
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 116 LIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRL 175
+I D MPG G+D+L LK S D+PV++ S+ N P + CL+ GA F+ KPV +
Sbjct: 80 VIFLDLNMPGKNGFDVLNELKGSDKSDIPVIIFSTSNEPGIIDKCLKLGANYFITKPVLM 139
Query: 176 SDLEK 180
D+ K
Sbjct: 140 KDIVK 144
>gi|418241003|ref|ZP_12867537.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|433548337|ref|ZP_20504387.1| Two-component sensor protein RcsC [Yersinia enterocolitica IP
10393]
gi|351779648|gb|EHB21751.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|431790897|emb|CCO67427.1| Two-component sensor protein RcsC [Yersinia enterocolitica IP
10393]
Length = 932
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 28/170 (16%)
Query: 18 LLENIPQQER----EGQLEDIPQQEKQPQQQQQET--FHVLAVDDSLIDRKILENLLRVS 71
LLE IP + + +ED P P+ E H+L VDD I+R++L + L
Sbjct: 773 LLEIIPLLDHILLDQQVVEDTPLALPAPKTNLDENADLHILVVDDHPINRRLLADQLTAL 832
Query: 72 SYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDL 131
Y+V + G AL L N+N+ V++++TD MP M GY L
Sbjct: 833 GYRVITANDGLDALAVL--------NTNS-------------VDIVLTDVNMPNMDGYRL 871
Query: 132 LKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKL 181
RL+ + + PV+ +++ + C+E G + L KPV L L ++
Sbjct: 872 THRLRELN-HNFPVIGVTANALAESKLRCIEAGMDNCLSKPVTLDTLRQM 920
>gi|147782854|emb|CAN61302.1| hypothetical protein VITISV_003290 [Vitis vinifera]
Length = 594
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 76/149 (51%), Gaps = 16/149 (10%)
Query: 47 ETFHVLAVDDSLIDRKILENLLRVSSYQ-----VTC---------VDSGDKALEYLGLID 92
+ V+ VDD +I I+ +L+ YQ V C G++A G+
Sbjct: 19 DAIRVMVVDDDIICLSIVAGMLKTWKYQDMLNVVFCNFIKIIRQGCIRGEEASTRNGISS 78
Query: 93 NLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSEN 152
++ + NA + ++ + + +L++TD MP M G++ K+++ ++PVV+MS+++
Sbjct: 79 SVVSVKNAEDALITLRTRSNFFHLVVTDVHMPKMDGFEFQKQVREEF--NLPVVMMSADD 136
Query: 153 VPSRVTMCLEEGAEEFLLKPVRLSDLEKL 181
S + LE GA +++KPV DL+ L
Sbjct: 137 KESSILRGLEAGAAFYIVKPVNYDDLKDL 165
>gi|383454950|ref|YP_005368939.1| sigma-54 activator protein ActB [Corallococcus coralloides DSM
2259]
gi|380731966|gb|AFE07968.1| sigma-54 activator protein ActB [Corallococcus coralloides DSM
2259]
Length = 561
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 64/138 (46%), Gaps = 22/138 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL VDD R L LL S YQV C SG +ALE L S S
Sbjct: 15 VLVVDDEESVRTFLSELLGSSGYQVRCASSGSQALEML---------SGGS--------- 56
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
+ ++ D MP M+G ++L+R + S+ PV+V+S+ + L+ GA ++L
Sbjct: 57 ---FDAVLLDVVMPEMSGLEVLRRYR-STGGTAPVIVLSALSGADDAVRALKMGASDYLA 112
Query: 171 KPVRLSDLEKLQPRLLKS 188
KP +L+ + R L +
Sbjct: 113 KPFGNDELQDVLARALGT 130
>gi|428296955|ref|YP_007135261.1| response regulator receiver sensor signal transduction histidine
kinase [Calothrix sp. PCC 6303]
gi|428233499|gb|AFY99288.1| response regulator receiver sensor signal transduction histidine
kinase [Calothrix sp. PCC 6303]
Length = 373
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 65/123 (52%), Gaps = 23/123 (18%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+LAVDD+L + +L+ LL V Y+V V G A+EY+ N+ P
Sbjct: 13 ILAVDDTLDNLVLLQTLLEVEGYKVDMVPDGKGAIEYV---------ENSPP-------- 55
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+LI+ D MP M GYD+ + ++ + D+P++++++ + S V L+ GA +F+
Sbjct: 56 ----DLILLDVMMPFMDGYDVTRHIRSHKEFDDIPILLLTAFHDVS-VVEGLDAGANDFI 110
Query: 170 LKP 172
KP
Sbjct: 111 RKP 113
>gi|392383655|ref|YP_005032852.1| putative response regulator (CheY-receiver and serine phosphatase
domains) [Azospirillum brasilense Sp245]
gi|356878620|emb|CCC99507.1| putative response regulator (CheY-receiver and serine phosphatase
domains) [Azospirillum brasilense Sp245]
Length = 400
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 66/135 (48%), Gaps = 23/135 (17%)
Query: 41 PQQQQQETFHVLAVDDSLIDRKILENLL-RVSSYQVTCVDSGDKALEYLGLIDNLENNSN 99
P+ ET VL VDD+ ++R +L+ LL R ++ + G+ AL L
Sbjct: 5 PEVPGLETARVLVVDDNRVNRHLLQALLERGGVTRIDMAEDGNDALARL----------- 53
Query: 100 ASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVT 158
+ R +LI+ D MP + G+++ +RL+ + +WKD+PV+V SS N
Sbjct: 54 ----------DTFRPDLILLDLMMPNLDGFEMCRRLRAMPAWKDLPVLVQSSLNRAEDRA 103
Query: 159 MCLEEGAEEFLLKPV 173
GA +++ KP+
Sbjct: 104 KAFAAGATDYVTKPI 118
>gi|46200530|gb|AAS82604.1| putative response regulator [Zea mays]
Length = 87
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 36/43 (83%), Gaps = 1/43 (2%)
Query: 122 CMPGMTGYDLLKRLKVSS-WKDVPVVVMSSENVPSRVTMCLEE 163
+PGMTGY+LLKR+K S+ D+ VV+MSSENVP+R+T CLEE
Sbjct: 37 AVPGMTGYELLKRVKESAALSDILVVIMSSENVPNRITRCLEE 79
>gi|386307708|ref|YP_006003764.1| two-component sensor protein RcsC [Yersinia enterocolitica subsp.
palearctica Y11]
gi|318606418|emb|CBY27916.1| two-component sensor protein RcsC [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 955
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 78/170 (45%), Gaps = 28/170 (16%)
Query: 18 LLENIPQQER----EGQLEDIPQQEKQPQQQQQET--FHVLAVDDSLIDRKILENLLRVS 71
LLE IP + + +ED P P+ E H+L VDD I+R++L + L
Sbjct: 796 LLEIIPLLDHILLDQQVVEDTPLALPAPKTNLDENADLHILVVDDHPINRRLLADQLTAL 855
Query: 72 SYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDL 131
Y+V + G AL L N+N+ V++++TD MP M GY L
Sbjct: 856 GYRVITANDGLDALAVL--------NTNS-------------VDIVLTDVNMPNMDGYRL 894
Query: 132 LKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDLEKL 181
RL+ + + PV+ +++ + C+E G + L KPV L L ++
Sbjct: 895 THRLRELN-HNFPVIGVTANALAESKLRCIEAGMDNCLSKPVTLDTLRQM 943
>gi|126178188|ref|YP_001046153.1| response regulator receiver sensor signal transduction histidine
kinase [Methanoculleus marisnigri JR1]
gi|125860982|gb|ABN56171.1| response regulator receiver sensor signal transduction histidine
kinase [Methanoculleus marisnigri JR1]
Length = 440
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 22/123 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+DS + + ++L Y VT V G++A+ + E
Sbjct: 13 VLVVEDSRTQAEFIRHVLETEGYDVTLVADGNEAIR---------------------RME 51
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
++++TD MPGM GY+L +R+K + D PV+++++ P+ V L GA+ F++
Sbjct: 52 VDMPDIVLTDIMMPGMDGYELCRRIKQQN-PDTPVILVTNLFDPADVLKGLASGADSFIV 110
Query: 171 KPV 173
KPV
Sbjct: 111 KPV 113
>gi|430003232|emb|CCF19017.1| response regulator PleD (with diguanylate cyclase and response
regulator receiver domains) [Rhizobium sp.]
Length = 456
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 22/127 (17%)
Query: 48 TFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLST 107
T +L VDD + K+LE L + V + G KAL
Sbjct: 2 TARILVVDDVPANLKLLEARLVAEYFDVLTAEDGFKALAIC------------------- 42
Query: 108 KKEESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAE 166
E + V+LI+ D MPG++G+++ +RLK + +P+V++++ + P+ L+ GA+
Sbjct: 43 --EHTHVDLILLDIMMPGLSGFEVCERLKADPRFAHIPIVMVTALDQPADRVRGLKAGAD 100
Query: 167 EFLLKPV 173
+FL KPV
Sbjct: 101 DFLTKPV 107
>gi|343511279|ref|ZP_08748453.1| response regulator receiver protein [Vibrio scophthalmi LMG 19158]
gi|342798612|gb|EGU34211.1| response regulator receiver protein [Vibrio scophthalmi LMG 19158]
Length = 508
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E + V++I++D+ MP MTG +LLK+++ S + K VP ++++ S V +E G E+
Sbjct: 57 ERNSVDIIVSDWKMPKMTGLELLKKVRQSKAHKSVPFIMLTGNLHQSDVVEAIEAGVSEY 116
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDND 202
L+KP L + + SP RS +N SD D
Sbjct: 117 LVKPFSKVTLSERVHKAFVSPIRSHSSNRSSDKD 150
>gi|262403141|ref|ZP_06079701.1| chemotaxis regulator CheY [Vibrio sp. RC586]
gi|262350640|gb|EEY99773.1| chemotaxis regulator CheY [Vibrio sp. RC586]
Length = 119
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 71/137 (51%), Gaps = 22/137 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VLAVDDS+ R+++ + L+ + Y+V G AL TK +
Sbjct: 4 VLAVDDSISIRQMVSHTLQDAGYEVETASDGRDAL---------------------TKAQ 42
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKV-SSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
++R ++I++D MP M G+D +K +++ S +K +P++++++E P + GA +L
Sbjct: 43 KTRFDVIISDVNMPVMGGFDFVKAVRMQSQYKFIPILMLTTETSPEKKQEGKAVGATGWL 102
Query: 170 LKPVRLSDLEKLQPRLL 186
+KP L K R+L
Sbjct: 103 VKPFNPETLLKTLQRVL 119
>gi|154253569|ref|YP_001414393.1| nitrogen metabolism transcriptional regulator NtrC [Parvibaculum
lavamentivorans DS-1]
gi|154157519|gb|ABS64736.1| nitrogen metabolism transcriptional regulator, NtrC, Fis Family
[Parvibaculum lavamentivorans DS-1]
Length = 480
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Query: 93 NLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSEN 152
E S + +TL + +LI+TD MP +DL+ R+K + D+P+VVMS++N
Sbjct: 27 GYEVRSTGNAATLWRWVSQGEGDLIITDVVMPDENAFDLIPRIK-RARPDLPIVVMSAQN 85
Query: 153 VPSRVTMCLEEGAEEFLLKPVRLSDLEKLQPRLLKSP 189
M E GA E+L KP L++L ++ R + +P
Sbjct: 86 TLKTAIMAAERGAYEYLPKPFDLNELIRVVDRAMTAP 122
>gi|114332343|ref|YP_748565.1| response regulator receiver protein [Nitrosomonas eutropha C91]
gi|114309357|gb|ABI60600.1| response regulator receiver protein [Nitrosomonas eutropha C91]
Length = 121
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 71/136 (52%), Gaps = 22/136 (16%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDDS DR I+ ++L + YQV +SG++ + TK
Sbjct: 6 ILVVDDSPTDRHIISSILTQNGYQVGVAESGEEGV---------------------TKAR 44
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRL-KVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
E+ +L++ D MPG+ GY + L + S+ + +P+++ ++++ + L +GA++++
Sbjct: 45 ETWPDLVLMDVVMPGINGYQATRMLARDSATRHIPIILCTTKDQQTDKIWGLRQGAQDYI 104
Query: 170 LKPVRLSDLEKLQPRL 185
KPV ++L + RL
Sbjct: 105 TKPVMAAELLQKIARL 120
>gi|429213361|ref|ZP_19204526.1| putative sensor/response regulator hybrid [Pseudomonas sp. M1]
gi|428157843|gb|EKX04391.1| putative sensor/response regulator hybrid [Pseudomonas sp. M1]
Length = 642
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
VL V+D+ +++ ++E +LR Y+VT V G +A+ E
Sbjct: 523 VLLVEDNPVNQTVIEAMLRSLGYRVTLVGDGAQAVR---------------------TAE 561
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFL 169
+ + I+ D +P + GY+ ++++ + + VP++ +++ + +CLE G +++L
Sbjct: 562 RNEFDAILMDCRLPLLNGYEATRQIRALPGRQQVPIIALTANALQGDRELCLESGMDDYL 621
Query: 170 LKPVRLSDLEKLQPRLLKS 188
KP + +DL+K+ R L S
Sbjct: 622 AKPFKRADLQKILQRWLTS 640
>gi|408376036|ref|ZP_11173642.1| metal dependent phosphohydrolase with a response regulator receiver
protein [Agrobacterium albertimagni AOL15]
gi|407750138|gb|EKF61648.1| metal dependent phosphohydrolase with a response regulator receiver
protein [Agrobacterium albertimagni AOL15]
Length = 366
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 91 IDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLK-VSSWKDVPVVVMS 149
+D E PS + + +LI+ DY MPGM G +L+ R++ +S+ +DVPV++++
Sbjct: 23 VDTCEILPFLDPSEALMTMQTLQADLIIVDYNMPGMNGVELILRVRQLSNGRDVPVIMLT 82
Query: 150 SENVPSRVTMCLEEGAEEFLLKPVRLSDL 178
SE P+ +E GA EFL KP+ ++L
Sbjct: 83 SETDPAIKIDAIEAGATEFLTKPIDRTEL 111
>gi|359402093|ref|ZP_09195038.1| two-component response regulator [Novosphingobium pentaromativorans
US6-1]
gi|357596557|gb|EHJ58330.1| two-component response regulator [Novosphingobium pentaromativorans
US6-1]
Length = 250
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 21/122 (17%)
Query: 51 VLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGLIDNLENNSNASPSTLSTKKE 110
+L VDD + R+ L +LR + ++ C+ L + A S L+
Sbjct: 17 ILIVDDDIGMRRALHRILRSNGFR--CL---------------LAEDGAAMRSVLA---- 55
Query: 111 ESRVNLIMTDYCMPGMTGYDLLKRLKVSSWKDVPVVVMSSENVPSRVTMCLEEGAEEFLL 170
E+RV+LI+ D MPG +G+DL + L++ VP++++S+ + + + LE GA++++
Sbjct: 56 EARVDLILLDVMMPGQSGFDLCRDLRIRDDNPVPIIMISARGEQTDLVIGLELGADDYIA 115
Query: 171 KP 172
KP
Sbjct: 116 KP 117
>gi|156050429|ref|XP_001591176.1| hypothetical protein SS1G_07801 [Sclerotinia sclerotiorum 1980]
gi|154692202|gb|EDN91940.1| hypothetical protein SS1G_07801 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1092
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 99/201 (49%), Gaps = 23/201 (11%)
Query: 18 LLENIPQQEREGQLEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTC 77
L+ I ++ EG + +Q Q++Q VL V+D+L+++K+L L+ + V+
Sbjct: 835 LMNGIEKERGEGAEQ---EQGHGRQEEQDNQLQVLVVEDNLLNQKVLVKSLKKEGFGVSV 891
Query: 78 VDSGDKALEYLGLIDNLENNSNASPSTLSTKKEESRVNLIMTDYCMPGMTGYDLLKRLKV 137
+ G +ALE+L + + S + + ++NLI+ D MP M G +K+++
Sbjct: 892 ANHGGEALEFLKKTKFWVGDGD------SREISKKQLNLILMDLEMPIMDGITCVKQIR- 944
Query: 138 SSWK-------DVPVVVMSSENVPSRVTMCLEEGAEEFLLKPVRLSDL----EKLQPRLL 186
+W+ VP++ +++ ++ ++ G ++ KP R+ D+ E+L R
Sbjct: 945 -AWERRGAVRGHVPIIAVTANARKDQIMSTIDAGMDDVTTKPYRIQDMLGQIERLVIRYS 1003
Query: 187 KSPNRSCGNNEDSDNDNKNET 207
+S G+ E+ D+ NE+
Sbjct: 1004 ESGG-GRGSREEMDSGTLNES 1023
>gi|300867045|ref|ZP_07111713.1| putative adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
gi|300334942|emb|CBN56879.1| putative adenylate/guanylate cyclase [Oscillatoria sp. PCC 6506]
Length = 1122
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 74/146 (50%), Gaps = 23/146 (15%)
Query: 31 LEDIPQQEKQPQQQQQETFHVLAVDDSLIDRKILENLLRVSSYQVTCVDSGDKALEYLGL 90
L I + P+ ++ F VL VDD I+R++L N L + +Y +T +G +AL
Sbjct: 693 LTSITSKNLDPKINNEKQFKVLIVDDEPINRQVLINNLSLYNYAITEASNGQEAL----- 747
Query: 91 IDNLENNSNASPSTLSTKKEESRV-NLIMTDYCMPGMTGYDLLKRLKVSS-WKDVPVVVM 148
T E + +LI+ D MP MTGY++ ++++ ++P+V++
Sbjct: 748 ----------------TAMENGFIPDLILLDLMMPQMTGYEVCQKIRARFPTYELPIVML 791
Query: 149 SSENVPSRVTMCLEEGAEEFLLKPVR 174
+++N + + E GA ++L KP++
Sbjct: 792 TAKNQVADIVEGFESGANDYLSKPIQ 817
>gi|343516480|ref|ZP_08753515.1| response regulator receiver protein [Vibrio sp. N418]
gi|342796065|gb|EGU31760.1| response regulator receiver protein [Vibrio sp. N418]
Length = 508
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 1/94 (1%)
Query: 110 EESRVNLIMTDYCMPGMTGYDLLKRLKVS-SWKDVPVVVMSSENVPSRVTMCLEEGAEEF 168
E + V++I++D+ MP MTG +LLK+++ S + K VP ++++ S V +E G E+
Sbjct: 57 ERNSVDIIVSDWKMPKMTGLELLKKVRQSKAHKSVPFIMLTGNLHQSDVVEAIEAGVSEY 116
Query: 169 LLKPVRLSDLEKLQPRLLKSPNRSCGNNEDSDND 202
L+KP L + + SP RS +N SD D
Sbjct: 117 LVKPFSKVTLSERVHKAFVSPIRSHSSNRSSDKD 150
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.309 0.126 0.346
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,650,464,469
Number of Sequences: 23463169
Number of extensions: 149968560
Number of successful extensions: 1577376
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3552
Number of HSP's successfully gapped in prelim test: 56882
Number of HSP's that attempted gapping in prelim test: 1467375
Number of HSP's gapped (non-prelim): 114487
length of query: 241
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 103
effective length of database: 9,121,278,045
effective search space: 939491638635
effective search space used: 939491638635
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 75 (33.5 bits)