BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026249
(241 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1SW3|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant T175v
pdb|1SW3|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant T175v
Length = 248
Score = 222 bits (565), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 133/190 (70%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AKL AD + +I +AAQ
Sbjct: 5 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 64
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 65 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 124
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTGKVATP+QAQEV
Sbjct: 125 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKVATPQQAQEV 184
Query: 215 HAALRDWLKN 224
H LR WLK+
Sbjct: 185 HEKLRGWLKS 194
>pdb|1TPH|1 Chain 1, 1.8 Angstroms Crystal Structure Of Wild Type Chicken
Triosephosphate Isomerase-Phosphoglycolohydroxamate
Complex
pdb|1TPH|2 Chain 2, 1.8 Angstroms Crystal Structure Of Wild Type Chicken
Triosephosphate Isomerase-Phosphoglycolohydroxamate
Complex
pdb|8TIM|A Chain A, Triose Phosphate Isomerase
pdb|8TIM|B Chain B, Triose Phosphate Isomerase
Length = 247
Score = 220 bits (561), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 131/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AKL AD + +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 183
Query: 215 HAALRDWLKN 224
H LR WLK
Sbjct: 184 HEKLRGWLKT 193
>pdb|1TPB|1 Chain 1, Offset Of A Catalytic Lesion By A Bound Water Soluble
pdb|1TPB|2 Chain 2, Offset Of A Catalytic Lesion By A Bound Water Soluble
Length = 247
Score = 219 bits (557), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 131/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AKL AD + +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q KA AD + W VV+AY+PVWAIGTGK ATP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYDPVWAIGTGKTATPQQAQEV 183
Query: 215 HAALRDWLKN 224
H LR WLK
Sbjct: 184 HEKLRGWLKT 193
>pdb|1SPQ|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SPQ|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 218 bits (556), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 131/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AKL AD + +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTGK TP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTKTPQQAQEV 183
Query: 215 HAALRDWLKN 224
H LR WLK+
Sbjct: 184 HEKLRGWLKS 193
>pdb|1TPW|A Chain A, Triosephosphate Isomerase Drinks Water To Keep Healthy
pdb|1TPW|B Chain B, Triosephosphate Isomerase Drinks Water To Keep Healthy
Length = 247
Score = 218 bits (556), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 130/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AKL AD + +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KDIG WV+LGH ERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHPERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 183
Query: 215 HAALRDWLKN 224
H LR WLK
Sbjct: 184 HEKLRGWLKT 193
>pdb|1TIM|A Chain A, Structure Of Triose Phosphate Isomerase From Chicken
Muscle
pdb|1TIM|B Chain B, Structure Of Triose Phosphate Isomerase From Chicken
Muscle
Length = 247
Score = 218 bits (554), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/191 (57%), Positives = 131/191 (68%), Gaps = 19/191 (9%)
Query: 53 NKFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAA 93
KFFVGGNWK NG ++S+ +L+ L+ AKL AD + +I +AA
Sbjct: 3 RKFFVGGNWKMNGKRKSLGELIHTLDGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAA 62
Query: 94 QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGV 153
QN + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGV
Sbjct: 63 QNCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGV 122
Query: 154 IACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQE 213
IACIGE+L EREAG T V FQ+ KA AD + W VV+AYEPVWAIGTGK ATP+QAQE
Sbjct: 123 IACIGEKLDEREAGITEKVVFQETKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQE 182
Query: 214 VHAALRDWLKN 224
VH LR WLK
Sbjct: 183 VHEKLRGWLKT 193
>pdb|1TPU|A Chain A, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
pdb|1TPU|B Chain B, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
Length = 247
Score = 217 bits (553), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 131/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AKL AD + +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KDIG WV+LG+SERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGNSERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 183
Query: 215 HAALRDWLKN 224
H LR WLK
Sbjct: 184 HEKLRGWLKT 193
>pdb|1TPC|1 Chain 1, Offset Of A Catalytic Lesion By A Bound Water Soluble
pdb|1TPC|2 Chain 2, Offset Of A Catalytic Lesion By A Bound Water Soluble
Length = 247
Score = 217 bits (553), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 130/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AKL AD + +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KDIG WV+LGH ERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHPERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q KA AD + W VV+AY+PVWAIGTGK ATP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYDPVWAIGTGKTATPQQAQEV 183
Query: 215 HAALRDWLKN 224
H LR WLK
Sbjct: 184 HEKLRGWLKT 193
>pdb|1WYI|A Chain A, Human Triosephosphate Isomerase Of New Crystal Form
pdb|1WYI|B Chain B, Human Triosephosphate Isomerase Of New Crystal Form
pdb|2JK2|A Chain A, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Crystal Structure Of The Wild Type Enzyme.
pdb|2JK2|B Chain B, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Crystal Structure Of The Wild Type Enzyme
Length = 250
Score = 217 bits (552), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 130/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AK+ AD + +I +AAQ
Sbjct: 7 KFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQ 66
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 67 NCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVI 126
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 127 ACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 186
Query: 215 HAALRDWLKN 224
H LR WLK+
Sbjct: 187 HEKLRGWLKS 196
>pdb|1R2R|A Chain A, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2R|B Chain B, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2R|C Chain C, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2R|D Chain D, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|A Chain A, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|B Chain B, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|C Chain C, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2S|D Chain D, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2T|A Chain A, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
pdb|1R2T|B Chain B, Crystal Structure Of Rabbit Muscle Triosephosphate
Isomerase
Length = 248
Score = 217 bits (552), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 131/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+++ +L++ LN AK+ AD + +I +AAQ
Sbjct: 5 KFFVGGNWKMNGRKKNLGELITTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQ 64
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+ALSEGLGVI
Sbjct: 65 NCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALSEGLGVI 124
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 125 ACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 184
Query: 215 HAALRDWLKN 224
H LR WLK+
Sbjct: 185 HEKLRGWLKS 194
>pdb|1SW7|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant K174n, T175s, A176s
pdb|1SW7|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6
Mutant K174n, T175s, A176s
Length = 248
Score = 217 bits (552), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 131/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AKL AD + +I +AAQ
Sbjct: 5 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 64
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 65 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 124
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTG +TP+QAQEV
Sbjct: 125 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGNSSTPQQAQEV 184
Query: 215 HAALRDWLKN 224
H LR WLK+
Sbjct: 185 HEKLRGWLKS 194
>pdb|1HTI|A Chain A, Crystal Structure Of Recombinant Human Triosephosphate
Isomerase At 2.8 Angstroms Resolution. Triosephosphate
Isomerase Related Human Genetic Disorders And Comparison
With The Trypanosomal Enzyme
pdb|1HTI|B Chain B, Crystal Structure Of Recombinant Human Triosephosphate
Isomerase At 2.8 Angstroms Resolution. Triosephosphate
Isomerase Related Human Genetic Disorders And Comparison
With The Trypanosomal Enzyme
Length = 248
Score = 217 bits (552), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 130/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AK+ AD + +I +AAQ
Sbjct: 5 KFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQ 64
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KD G WVVLGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 65 NCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGESDELIGQKVAHALAEGLGVI 124
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 125 ACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 184
Query: 215 HAALRDWLKN 224
H LR WLK+
Sbjct: 185 HEKLRGWLKS 194
>pdb|2VOM|A Chain A, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation.
pdb|2VOM|B Chain B, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation.
pdb|2VOM|C Chain C, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation.
pdb|2VOM|D Chain D, Structural Basis Of Human Triosephosphate Isomerase
Deficiency. Mutation E104d And Correlation To Solvent
Perturbation
Length = 250
Score = 216 bits (549), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/190 (57%), Positives = 130/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AK+ AD + +I +AAQ
Sbjct: 7 KFFVGGNWKMNGRKQSLGELIGTLNAAKVPADTEVVCAPPTAYIDFARQKLDPKIAVAAQ 66
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KD G WVVLGHSERRHV G+ D+ IG+K A+AL+EGLGVI
Sbjct: 67 NCYKVTNGAFTGEISPGMIKDCGATWVVLGHSERRHVFGDSDELIGQKVAHALAEGLGVI 126
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q K AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 127 ACIGEKLDEREAGITEKVVFEQTKVIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 186
Query: 215 HAALRDWLKN 224
H LR WLK+
Sbjct: 187 HEKLRGWLKS 196
>pdb|1SW0|A Chain A, Triosephosphate Isomerase From Gallus Gallus, Loop 6 Hinge
Mutant K174l, T175w
pdb|1SW0|B Chain B, Triosephosphate Isomerase From Gallus Gallus, Loop 6 Hinge
Mutant K174l, T175w
Length = 248
Score = 215 bits (548), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 131/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AKL AD + +I +AAQ
Sbjct: 5 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 64
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 65 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 124
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTG ATP+QAQEV
Sbjct: 125 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGLWATPQQAQEV 184
Query: 215 HAALRDWLKN 224
H LR WLK+
Sbjct: 185 HEKLRGWLKS 194
>pdb|1SU5|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SU5|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 215 bits (548), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 130/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AKL AD + +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTG TP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGNPNTPQQAQEV 183
Query: 215 HAALRDWLKN 224
H LR WLK+
Sbjct: 184 HEKLRGWLKS 193
>pdb|1TPV|A Chain A, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
pdb|1TPV|B Chain B, S96p Change Is A Second-Site Suppressor For H95n Sluggish
Mutant Triosephosphate Isomerase
Length = 247
Score = 215 bits (548), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 130/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AKL AD + +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KDIG WV+LG+ ERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGNPERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTGK ATP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGKTATPQQAQEV 183
Query: 215 HAALRDWLKN 224
H LR WLK
Sbjct: 184 HEKLRGWLKT 193
>pdb|1SQ7|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SQ7|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 215 bits (548), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 131/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AKL AD + +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTG ATP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGLWATPQQAQEV 183
Query: 215 HAALRDWLKN 224
H LR WLK+
Sbjct: 184 HEKLRGWLKS 193
>pdb|1SSD|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SSD|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SSG|A Chain A, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
pdb|1SSG|B Chain B, Understanding Protein Lids: Structural Analysis Of Active
Hinge Mutants In Triosephosphate Isomerase
Length = 247
Score = 215 bits (547), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/190 (57%), Positives = 130/190 (68%), Gaps = 19/190 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KFFVGGNWK NG K+S+ +L+ LN AKL AD + +I +AAQ
Sbjct: 4 KFFVGGNWKMNGDKKSLGELIHTLNGAKLSADTEVVCGAPSIYLDFARQKLDAKIGVAAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KDIG WV+LGHSERRHV GE D+ IG+K A+AL+EGLGVI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDIGAAWVILGHSERRHVFGESDELIGQKVAHALAEGLGVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE+L EREAG T V F+Q KA AD + W VV+AYEPVWAIGTG TP+QAQEV
Sbjct: 124 ACIGEKLDEREAGITEKVVFEQTKAIADNVKDWSKVVLAYEPVWAIGTGYSLTPQQAQEV 183
Query: 215 HAALRDWLKN 224
H LR WLK+
Sbjct: 184 HEKLRGWLKS 193
>pdb|1YPI|A Chain A, Structure Of Yeast Triosephosphate Isomerase At 1.9-
Angstroms Resolution
pdb|1YPI|B Chain B, Structure Of Yeast Triosephosphate Isomerase At 1.9-
Angstroms Resolution
pdb|2YPI|A Chain A, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase And 2-Phosphoglycolate At 2.5-
Angstroms Resolution. Implications For Catalysis
pdb|2YPI|B Chain B, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase And 2-Phosphoglycolate At 2.5-
Angstroms Resolution. Implications For Catalysis
pdb|7TIM|A Chain A, Structure Of The Triosephosphate Isomerase-
Phosphoglycolohydroxamate Complex: An Analogue Of The
Intermediate On The Reaction Pathway
pdb|7TIM|B Chain B, Structure Of The Triosephosphate Isomerase-
Phosphoglycolohydroxamate Complex: An Analogue Of The
Intermediate On The Reaction Pathway
Length = 247
Score = 197 bits (500), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 94/188 (50%), Positives = 128/188 (68%), Gaps = 20/188 (10%)
Query: 55 FFVGGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQ 94
FFVGGN+K NG+K+SI ++V LN A + +V+ ++ + AQ
Sbjct: 4 FFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N+++ GAFTGE SV+Q+KD+G KWV+LGHSERR EDD+FI K +AL +G+GVI
Sbjct: 64 NAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
CIGE L+E++AGKT DV +QL A + + W NVV+AYEPVWAIGTG ATPE AQ++
Sbjct: 124 LCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDI 183
Query: 215 HAALRDWL 222
HA++R +L
Sbjct: 184 HASIRKFL 191
>pdb|3TH6|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Rhipicephalus (Boophilus) Microplus.
pdb|3TH6|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Rhipicephalus (Boophilus) Microplus
Length = 249
Score = 195 bits (496), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 126/188 (67%), Gaps = 19/188 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDRI-------------------EIAAQ 94
+F VGGNWK +G+K SI + + L A L+ +V+ I +AAQ
Sbjct: 5 RFCVGGNWKMHGSKNSIRDICNTLKGASLDPNVEVIVACPAPYLDYCRSLLPPSVALAAQ 64
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + + GAFTGEIS +KD G +WV+LGHSERRHV EDD IG+K +AL GL VI
Sbjct: 65 NCYKVEQGAFTGEISPGMIKDCGGQWVILGHSERRHVFKEDDVLIGEKIKHALESGLNVI 124
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE L++REAG+T +VCF+Q+K A + W VVIAYEPVWAIGTGK ATP+QAQEV
Sbjct: 125 ACIGELLEDREAGRTEEVCFRQIKHIASNVKDWSKVVIAYEPVWAIGTGKTATPDQAQEV 184
Query: 215 HAALRDWL 222
H+ +R+WL
Sbjct: 185 HSKVRNWL 192
>pdb|2I9E|A Chain A, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
pdb|2I9E|B Chain B, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
pdb|2I9E|C Chain C, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
pdb|2I9E|D Chain D, Structure Of Triosephosphate Isomerase Of Tenebrio Molitor
Length = 259
Score = 195 bits (495), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 120/188 (63%), Gaps = 19/188 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVD-------------------RIEIAAQ 94
KF VGGNWK NG K+ I +++ L L D + I +AAQ
Sbjct: 4 KFVVGGNWKMNGDKKQINEIIGFLKSGPLNQDTEVVVGVPAIYLELVRTCVPASIGVAAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KD+G WV+LGHSERR + GE D+ I +K +AL GL VI
Sbjct: 64 NCYKVPKGAFTGEISPAMIKDVGADWVILGHSERRQIFGESDELIAEKVCHALESGLKVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
ACIGE L+EREAGKT +V F+Q KA A + W NVVIAYEPVWAIGTGK ATP+QAQ+V
Sbjct: 124 ACIGETLEEREAGKTEEVVFRQTKAIAAKVNDWSNVVIAYEPVWAIGTGKTATPQQAQDV 183
Query: 215 HAALRDWL 222
H ALR W+
Sbjct: 184 HKALRQWI 191
>pdb|4FF7|A Chain A, Structure Of C126s Mutant Of Saccharomyces Cerevisiae
Triosephosphate Isomerase
pdb|4FF7|B Chain B, Structure Of C126s Mutant Of Saccharomyces Cerevisiae
Triosephosphate Isomerase
Length = 248
Score = 194 bits (492), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 127/188 (67%), Gaps = 20/188 (10%)
Query: 55 FFVGGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQ 94
FFVGGN+K NG+K+SI ++V LN A + +V+ ++ + AQ
Sbjct: 5 FFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQ 64
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N+++ GAFTGE SV+Q+KD+G KWV+LGHSERR EDD+FI K +AL +G+GVI
Sbjct: 65 NAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVI 124
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
IGE L+E++AGKT DV +QL A + + W NVV+AYEPVWAIGTG ATPE AQ++
Sbjct: 125 LSIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDI 184
Query: 215 HAALRDWL 222
HA++R +L
Sbjct: 185 HASIRKFL 192
>pdb|3YPI|A Chain A, Electrophilic Catalysis In Triosephosphase Isomerase: The
Role Of Histidine-95
pdb|3YPI|B Chain B, Electrophilic Catalysis In Triosephosphase Isomerase: The
Role Of Histidine-95
Length = 247
Score = 194 bits (492), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 93/188 (49%), Positives = 127/188 (67%), Gaps = 20/188 (10%)
Query: 55 FFVGGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQ 94
FFVGGN+K NG+K+SI ++V LN A + +V+ ++ + AQ
Sbjct: 4 FFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N+++ GAFTGE SV+Q+KD+G KWV+LG SERR EDD+FI K +AL +G+GVI
Sbjct: 64 NAYLKASGAFTGENSVDQIKDVGAKWVILGQSERRSYFHEDDKFIADKTKFALGQGVGVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
CIGE L+E++AGKT DV +QL A + + W NVV+AYEPVWAIGTG ATPE AQ++
Sbjct: 124 LCIGETLEEKKAGKTLDVVERQLNAVLEEVKDWTNVVVAYEPVWAIGTGLAATPEDAQDI 183
Query: 215 HAALRDWL 222
HA++R +L
Sbjct: 184 HASIRKFL 191
>pdb|1I45|A Chain A, Yeast Triosephosphate Isomerase (Mutant)
pdb|1I45|B Chain B, Yeast Triosephosphate Isomerase (Mutant)
Length = 248
Score = 190 bits (482), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 127/188 (67%), Gaps = 20/188 (10%)
Query: 55 FFVGGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQ 94
FFVGGN+K NG+K+SI ++V LN A + +V+ ++ + AQ
Sbjct: 5 FFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQ 64
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N+++ GAFTGE SV+Q+KD+G K+V+LGHSERR EDD+FI K +AL +G+GVI
Sbjct: 65 NAYLKASGAFTGENSVDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQGVGVI 124
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
CIGE L+E++AGKT DV +QL A + + + NVV+AYEPV AIGTG ATPE AQ++
Sbjct: 125 LCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFTNVVVAYEPVXAIGTGLAATPEDAQDI 184
Query: 215 HAALRDWL 222
HA++R +L
Sbjct: 185 HASIRKFL 192
>pdb|1NF0|A Chain A, Triosephosphate Isomerase In Complex With Dhap
pdb|1NF0|B Chain B, Triosephosphate Isomerase In Complex With Dhap
pdb|1NEY|A Chain A, Triosephosphate Isomerase In Complex With Dhap
pdb|1NEY|B Chain B, Triosephosphate Isomerase In Complex With Dhap
Length = 247
Score = 190 bits (482), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 91/188 (48%), Positives = 127/188 (67%), Gaps = 20/188 (10%)
Query: 55 FFVGGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQ 94
FFVGGN+K NG+K+SI ++V LN A + +V+ ++ + AQ
Sbjct: 4 FFVGGNFKLNGSKQSIKEIVERLNTASIPENVEVVICPPATYLDYSVSLVKKPQVTVGAQ 63
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N+++ GAFTGE SV+Q+KD+G K+V+LGHSERR EDD+FI K +AL +G+GVI
Sbjct: 64 NAYLKASGAFTGENSVDQIKDVGAKYVILGHSERRSYFHEDDKFIADKTKFALGQGVGVI 123
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
CIGE L+E++AGKT DV +QL A + + + NVV+AYEPV AIGTG ATPE AQ++
Sbjct: 124 LCIGETLEEKKAGKTLDVVERQLNAVLEEVKDFTNVVVAYEPVXAIGTGLAATPEDAQDI 183
Query: 215 HAALRDWL 222
HA++R +L
Sbjct: 184 HASIRKFL 191
>pdb|1MO0|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Triose
Phosphate Isomerase
pdb|1MO0|B Chain B, Structural Genomics Of Caenorhabditis Elegans: Triose
Phosphate Isomerase
Length = 275
Score = 187 bits (475), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 123/189 (65%), Gaps = 19/189 (10%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDRIE-------------------IAAQ 94
KFFVGGNWK NG S+ +V+ LN + + VD + +AAQ
Sbjct: 24 KFFVGGNWKMNGDYASVDGIVTFLNASADNSSVDVVVAPPAPYLAYAKSKLKAGVLVAAQ 83
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGEIS +KD+G +WV+LGHSERRHV GE D I +K +AL G+ V+
Sbjct: 84 NCYKVPKGAFTGEISPAMIKDLGLEWVILGHSERRHVFGESDALIAEKTVHALEAGIKVV 143
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEV 214
CIGE+L+EREAG T DV F+QL+A D SW+N+VIAYEPVWAIGTGK A+ EQAQEV
Sbjct: 144 FCIGEKLEEREAGHTKDVNFRQLQAIVDKGVSWENIVIAYEPVWAIGTGKTASGEQAQEV 203
Query: 215 HAALRDWLK 223
H +R +LK
Sbjct: 204 HEWIRAFLK 212
>pdb|1QDS|A Chain A, Superstable E65q Mutant Of Leishmania Mexicana
Triosephosphate Isomerase (Tim)
pdb|1IF2|A Chain A, X-Ray Structure Of Leishmania Mexicana Triosephosphate
Isomerase Complexed With Ipp
pdb|1N55|A Chain A, 0.83a Resolution Structure Of The E65q Mutant Of
Leishmania Mexicana Triosephosphate Isomerase Complexed
With 2-Phosphoglycolate
pdb|2VXN|A Chain A, E65q-Tim Complexed With Phosphoglycolohydroxamate At 0.82
A Resolution
pdb|2Y61|A Chain A, Crystal Structure Of Leishmanial E65q-Tim Complexed With
S-Glycidol Phosphate
pdb|2Y62|A Chain A, Crystal Structure Of Leishmanial E65q-Tim Complexed With
R-Glycidol Phosphate
pdb|2Y63|A Chain A, Crystal Structure Of Leishmanial E65q-Tim Complexed With
Bromohydroxyacetone Phosphate
Length = 251
Score = 175 bits (443), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 114/187 (60%), Gaps = 23/187 (12%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSW 97
NWKCNGT SI KLV N+ + DV + I+AQN+
Sbjct: 10 AANWKCNGTTASIEKLVQVFNEHTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAQNA- 68
Query: 98 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 157
+ K GAFTGE+S+ LKDIG WV+LGHSERR GE D+ + +K + A +G VIACI
Sbjct: 69 IAKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACI 128
Query: 158 GEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVH 215
GE LQ+REA +T V Q A A + +W+ VV+AYEPVWAIGTGKVATPEQAQEVH
Sbjct: 129 GETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQEVH 188
Query: 216 AALRDWL 222
LR W+
Sbjct: 189 LLLRKWV 195
>pdb|1AMK|A Chain A, Leishmania Mexicana Triose Phosphate Isomerase
Length = 251
Score = 173 bits (439), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 92/187 (49%), Positives = 114/187 (60%), Gaps = 23/187 (12%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSW 97
NWKCNGT SI KLV N+ + DV + I+A+N+
Sbjct: 10 AANWKCNGTTASIEKLVQVFNEHTISHDVQCVVAPTFVHIPLVQAKLRNPKYVISAENA- 68
Query: 98 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 157
+ K GAFTGE+S+ LKDIG WV+LGHSERR GE D+ + +K + A +G VIACI
Sbjct: 69 IAKSGAFTGEVSMPILKDIGVHWVILGHSERRTYYGETDEIVAQKVSEACKQGFMVIACI 128
Query: 158 GEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVH 215
GE LQ+REA +T V Q A A + +W+ VV+AYEPVWAIGTGKVATPEQAQEVH
Sbjct: 129 GETLQQREANQTAKVVLSQTSAIAAKLTKDAWNQVVLAYEPVWAIGTGKVATPEQAQEVH 188
Query: 216 AALRDWL 222
LR W+
Sbjct: 189 LLLRKWV 195
>pdb|2OMA|A Chain A, Crystallographic Analysis Of A Chemically Modified
Triosephosphate Isomerase From Trypanosoma Cruzi With
Dithiobenzylamine (dtba)
pdb|2OMA|B Chain B, Crystallographic Analysis Of A Chemically Modified
Triosephosphate Isomerase From Trypanosoma Cruzi With
Dithiobenzylamine (dtba)
Length = 250
Score = 172 bits (436), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 116/189 (61%), Gaps = 23/189 (12%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSW 97
NWKCNG++ + L+ LN A + DV + +IAAQN+
Sbjct: 9 AANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNA- 67
Query: 98 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 157
+ + GAFTGE+S++ LKD G WVVLGHSERR GE ++ + +K A A + G VI C+
Sbjct: 68 ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQAXAAGFHVIVCV 127
Query: 158 GEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVH 215
GE +EREAG+T V QL A A + +W VVIAYEPVWAIGTGKVATP+QAQEVH
Sbjct: 128 GETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVH 187
Query: 216 AALRDWLKN 224
LR W+++
Sbjct: 188 ELLRRWVRS 196
>pdb|1CI1|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Trypanosoma Cruzi In Hexane
pdb|1CI1|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Trypanosoma Cruzi In Hexane
pdb|1SUX|A Chain A, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase From Trypanosoma Cruzi And
3-(2- Benzothiazolylthio)-1-propanesulfonic Acid
pdb|1SUX|B Chain B, Crystallographic Analysis Of The Complex Between
Triosephosphate Isomerase From Trypanosoma Cruzi And
3-(2- Benzothiazolylthio)-1-propanesulfonic Acid
Length = 251
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 116/189 (61%), Gaps = 23/189 (12%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSW 97
NWKCNG++ + L+ LN A + DV + +IAAQN+
Sbjct: 10 AANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNA- 68
Query: 98 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 157
+ + GAFTGE+S++ LKD G WVVLGHSERR GE ++ + +K A A + G VI C+
Sbjct: 69 ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCV 128
Query: 158 GEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVH 215
GE +EREAG+T V QL A A + +W VVIAYEPVWAIGTGKVATP+QAQEVH
Sbjct: 129 GETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVH 188
Query: 216 AALRDWLKN 224
LR W+++
Sbjct: 189 ELLRRWVRS 197
>pdb|1TCD|A Chain A, Trypanosoma Cruzi Triosephosphate Isomerase
pdb|1TCD|B Chain B, Trypanosoma Cruzi Triosephosphate Isomerase
Length = 249
Score = 172 bits (435), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 89/189 (47%), Positives = 116/189 (61%), Gaps = 23/189 (12%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSW 97
NWKCNG++ + L+ LN A + DV + +IAAQN+
Sbjct: 8 AANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNA- 66
Query: 98 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 157
+ + GAFTGE+S++ LKD G WVVLGHSERR GE ++ + +K A A + G VI C+
Sbjct: 67 ITRSGAFTGEVSLQILKDYGISWVVLGHSERRLYYGETNEIVAEKVAQACAAGFHVIVCV 126
Query: 158 GEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVH 215
GE +EREAG+T V QL A A + +W VVIAYEPVWAIGTGKVATP+QAQEVH
Sbjct: 127 GETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVH 186
Query: 216 AALRDWLKN 224
LR W+++
Sbjct: 187 ELLRRWVRS 195
>pdb|3QSR|A Chain A, Crystal Structure Of Trichomonas Vaginalis Triosephosphate
Isomerase Tvag_497370 Gene (Ile-45 Variant)
Length = 255
Score = 166 bits (420), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 118/190 (62%), Gaps = 22/190 (11%)
Query: 55 FFVGGNWKCNG-TKESITKLVSDLNDAKLEADVDRI-------------------EIAAQ 94
FFVGGNWK N T E KL+ LN AK+E +V+ + +++A+
Sbjct: 7 FFVGGNWKANPKTVEEAEKLIEMLNGAKVEGNVEVVVAAPFIFLPTLQQKLRKDWKVSAE 66
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGE++V +K G +W +LGHSERR ++ EDD+F+ KA +AL G+ +I
Sbjct: 67 NVFTKPNGAFTGEVTVPMIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENGMKII 126
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQ 212
C GE L EREAGK + Q++ AIP+ WD+VVIAYEP+WAIGTGKVA+ + AQ
Sbjct: 127 YCCGEHLSEREAGKASEFVSAQIEKMIPAIPAGKWDDVVIAYEPIWAIGTGKVASTQDAQ 186
Query: 213 EVHAALRDWL 222
E+ +RD L
Sbjct: 187 EMCKVIRDIL 196
>pdb|3QST|A Chain A, Crystal Structure Of Trichomonas Vaginalis Triosephosphate
Isomerase Tvag_096350 Gene (Val-45 Variant)
Length = 255
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 118/190 (62%), Gaps = 22/190 (11%)
Query: 55 FFVGGNWKCNG-TKESITKLVSDLNDAKLEADVDRI-------------------EIAAQ 94
FFVGGNWK N T + KLV LN AK+E +V+ + +++A+
Sbjct: 7 FFVGGNWKANPKTVQEAEKLVEMLNGAKVEGNVEVVVAAPFVFLPTLQQKLRKDWKVSAE 66
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGE++V +K G +W +LGHSERR ++ EDD+F+ KA +AL G+ +I
Sbjct: 67 NVFTKPNGAFTGEVTVPMIKSFGIEWTILGHSERRDILKEDDEFLAAKAKFALENGMKII 126
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQ 212
C GE L EREAGK + Q++ AIP+ WD+VVIAYEP+WAIGTGKVA+ + AQ
Sbjct: 127 YCCGEHLSEREAGKASEFVSAQIEKMIPAIPAGKWDDVVIAYEPIWAIGTGKVASTQDAQ 186
Query: 213 EVHAALRDWL 222
E+ +RD L
Sbjct: 187 EMCKVIRDIL 196
>pdb|3Q37|A Chain A, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes.
pdb|3Q37|B Chain B, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes.
pdb|3Q37|C Chain C, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes.
pdb|3Q37|D Chain D, Identification Of Amino Acids That Account For Long-Range
Interactions In Proteins Using Two Triosephosphate
Isomerases From Pathogenic Trypanosomes
Length = 251
Score = 165 bits (417), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/189 (46%), Positives = 118/189 (62%), Gaps = 23/189 (12%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSW 97
NWKCNG+++S+++L+ N + DV + +IAAQN+
Sbjct: 10 AANWKCNGSQQSLSELIDLFNSTSINHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNA- 68
Query: 98 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 157
+ + GAFTGE+S++ LKD G WVVLGHSERR GE ++ + K A A++ G VI C+
Sbjct: 69 ITRSGAFTGEVSLQILKDYGISWVVLGHSERRAYYGETNEIVADKVAAAVASGFHVIVCV 128
Query: 158 GEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVH 215
GE +EREAG+T V QL A A + +W VVIAYEPVWAIGTGKVATP+QAQEVH
Sbjct: 129 GETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVH 188
Query: 216 AALRDWLKN 224
LR W+++
Sbjct: 189 ELLRRWVRS 197
>pdb|2YC6|A Chain A, Crystal Structure Of A Triple Mutant (A198v, C202a And
C222n) Of Triosephosphate Isomerase From Giardia Lamblia
Complexed With 2-Phosphoglycolic Acid
Length = 257
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 116/191 (60%), Gaps = 24/191 (12%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQN 95
F+GGN+KCNG+ + I V+ + K+ VD ++ IAAQN
Sbjct: 7 FIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQN 66
Query: 96 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 155
++ GA+TGE SVE L+D+G K V++GHSERR ++GE D+ KKA AL +G+ VI
Sbjct: 67 VYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIF 126
Query: 156 CIGEQLQEREAGKTFDVCFQQLKAYADAIPS----WDNVVIAYEPVWAIGTGKVATPEQA 211
C+GE L ER+A +T +V QL+A + W VVIAYEPVW+IGTG VATPEQA
Sbjct: 127 CVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQA 186
Query: 212 QEVHAALRDWL 222
+EVH LR W
Sbjct: 187 EEVHVGLRKWF 197
>pdb|2YC8|A Chain A, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|B Chain B, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|C Chain C, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|D Chain D, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|E Chain E, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|F Chain F, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|G Chain G, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|H Chain H, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|I Chain I, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|J Chain J, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|K Chain K, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|L Chain L, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|M Chain M, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|N Chain N, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|O Chain O, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|P Chain P, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|Q Chain Q, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|R Chain R, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|S Chain S, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia.
pdb|2YC8|T Chain T, Crystal Structure Of A Double Mutant (C202a And C222n) Of
Triosephosphate Isomerase From Giardia Lamblia
Length = 255
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 116/191 (60%), Gaps = 24/191 (12%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQN 95
F+GGN+KCNG+ + I V+ + K+ VD ++ IAAQN
Sbjct: 7 FIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQN 66
Query: 96 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 155
++ GA+TGE SVE L+D+G K V++GHSERR ++GE D+ KKA AL +G+ VI
Sbjct: 67 VYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIF 126
Query: 156 CIGEQLQEREAGKTFDVCFQQLKAYADAIPS----WDNVVIAYEPVWAIGTGKVATPEQA 211
C+GE L ER+A +T +V QL+A + W VVIAYEPVW+IGTG VATPEQA
Sbjct: 127 CVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQA 186
Query: 212 QEVHAALRDWL 222
+EVH LR W
Sbjct: 187 EEVHVGLRKWF 197
>pdb|2YC7|A Chain A, Crystal Structure Of A Mutant (C202a) Of Triosephosphate
Isomerase From Giardia Lamblia Complexed With
2-Phosphoglycolic Acid
Length = 257
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 116/191 (60%), Gaps = 24/191 (12%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQN 95
F+GGN+KCNG+ + I V+ + K+ VD ++ IAAQN
Sbjct: 7 FIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQN 66
Query: 96 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 155
++ GA+TGE SVE L+D+G K V++GHSERR ++GE D+ KKA AL +G+ VI
Sbjct: 67 VYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIF 126
Query: 156 CIGEQLQEREAGKTFDVCFQQLKAYADAIPS----WDNVVIAYEPVWAIGTGKVATPEQA 211
C+GE L ER+A +T +V QL+A + W VVIAYEPVW+IGTG VATPEQA
Sbjct: 127 CVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQA 186
Query: 212 QEVHAALRDWL 222
+EVH LR W
Sbjct: 187 EEVHVGLRKWF 197
>pdb|2DP3|A Chain A, Crystal Structure Of A Double Mutant (C202aA198V) OF
TRIOSEPHOSPHATE Isomerase From Giardia Lamblia
Length = 257
Score = 162 bits (411), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 116/191 (60%), Gaps = 24/191 (12%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQN 95
F+GGN+KCNG+ + I V+ + K+ VD ++ IAAQN
Sbjct: 7 FIGGNFKCNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQN 66
Query: 96 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 155
++ GA+TGE SVE L+D+G K V++GHSERR ++GE D+ KKA AL +G+ VI
Sbjct: 67 VYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIF 126
Query: 156 CIGEQLQEREAGKTFDVCFQQLKAYADAIPS----WDNVVIAYEPVWAIGTGKVATPEQA 211
C+GE L ER+A +T +V QL+A + W VVIAYEPVW+IGTG VATPEQA
Sbjct: 127 CVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQA 186
Query: 212 QEVHAALRDWL 222
+EVH LR W
Sbjct: 187 EEVHVGLRKWF 197
>pdb|3PF3|A Chain A, Crystal Structure Of A Mutant (C202a) Of Triosephosphate
Isomerase From Giardia Lamblia Derivatized With Mmts
Length = 257
Score = 159 bits (402), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/191 (45%), Positives = 115/191 (60%), Gaps = 24/191 (12%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQN 95
F+GGN+K NG+ + I V+ + K+ VD ++ IAAQN
Sbjct: 7 FIGGNFKXNGSLDFIKSHVAAIAAHKIPDSVDVVIAPSAVHLSTAIAANTSKQLRIAAQN 66
Query: 96 SWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIA 155
++ GA+TGE SVE L+D+G K V++GHSERR ++GE D+ KKA AL +G+ VI
Sbjct: 67 VYLEGNGAWTGETSVEMLQDMGLKHVIVGHSERRRIMGETDEQSAKKAKRALEKGMTVIF 126
Query: 156 CIGEQLQEREAGKTFDVCFQQLKAYADAIPS----WDNVVIAYEPVWAIGTGKVATPEQA 211
C+GE L ER+A +T +V QL+A + W VVIAYEPVW+IGTG VATPEQA
Sbjct: 127 CVGETLDERKANRTMEVNIAQLEALGKELGESKMLWKEVVIAYEPVWSIGTGVVATPEQA 186
Query: 212 QEVHAALRDWL 222
+EVH LR W
Sbjct: 187 EEVHVGLRKWF 197
>pdb|1M6J|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Entamoeba Histolytica
pdb|1M6J|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Entamoeba Histolytica
Length = 261
Score = 159 bits (401), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 125/206 (60%), Gaps = 31/206 (15%)
Query: 54 KFFVGGNWKCNGTK---ESITKLVSDLNDAKL------------------------EADV 86
KF VGGNWKCNGT E++TK V+ DA+L EA+
Sbjct: 5 KFVVGGNWKCNGTLASIETLTKGVAASVDAELAKKVEVIVGVPFIYIPKVQQILAGEANG 64
Query: 87 DRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYA 146
I ++A+N+W K GA+TGE+ V L D +V+LGHSERR + E ++ + +K A
Sbjct: 65 ANILVSAENAWT-KSGAYTGEVHVGMLVDCQVPYVILGHSERRQIFHESNEQVAEKVKVA 123
Query: 147 LSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGK 204
+ GL VIACIGE +R A +T +V QLKA +AI +W N+++AYEPVWAIGTGK
Sbjct: 124 IDAGLKVIACIGETEAQRIANQTEEVVAAQLKAINNAISKEAWKNIILAYEPVWAIGTGK 183
Query: 205 VATPEQAQEVHAALRDWL-KNMSQQT 229
ATP+QAQEVH +R W+ +N+S++
Sbjct: 184 TATPDQAQEVHQYIRKWMTENISKEV 209
>pdb|4TIM|A Chain A, Crystallographic And Molecular Modeling Studies On
Trypanosomal Triosephosphate Isomerase: A Critical
Assessment Of The Predicted And Observed Structures Of
The Complex With 2-Phosphoglycerate
pdb|4TIM|B Chain B, Crystallographic And Molecular Modeling Studies On
Trypanosomal Triosephosphate Isomerase: A Critical
Assessment Of The Predicted And Observed Structures Of
The Complex With 2-Phosphoglycerate
pdb|5TIM|A Chain A, Refined 1.83 Angstroms Structure Of Trypanosomal
Triosephosphate Isomerase, Crystallized In The Presence
Of 2.4 M-Ammonium Sulphate. A Comparison With The
Structure Of The Trypanosomal Triosephosphate
Isomerase-Glycerol-3- Phosphate Complex
pdb|5TIM|B Chain B, Refined 1.83 Angstroms Structure Of Trypanosomal
Triosephosphate Isomerase, Crystallized In The Presence
Of 2.4 M-Ammonium Sulphate. A Comparison With The
Structure Of The Trypanosomal Triosephosphate
Isomerase-Glycerol-3- Phosphate Complex
pdb|6TIM|A Chain A, The Adaptability Of The Active Site Of Trypanosomal
Triosephosphate Isomerase As Observed In The Crystal
Structures Of Three Different Complexes
pdb|6TIM|B Chain B, The Adaptability Of The Active Site Of Trypanosomal
Triosephosphate Isomerase As Observed In The Crystal
Structures Of Three Different Complexes
pdb|1TRD|A Chain A, The Influence Of Crystal Packing On Crystallographic
Binding Studies: A New Crystal Form Of Trypanosomal Tim
pdb|1TRD|B Chain B, The Influence Of Crystal Packing On Crystallographic
Binding Studies: A New Crystal Form Of Trypanosomal Tim
pdb|1TPD|A Chain A, Structures Of The "open" And "closed" State Of
Trypanosomal Triosephosphate Isomerase, As Observed In A
New Crystal Form: Implications For The Reaction
Mechanism
pdb|1TPD|B Chain B, Structures Of The "open" And "closed" State Of
Trypanosomal Triosephosphate Isomerase, As Observed In A
New Crystal Form: Implications For The Reaction
Mechanism
pdb|1TPF|A Chain A, Comparison Of The Structures And The Crystal Contacts Of
Trypanosomal Triosephosphate Isomerase In Four Different
Crystal Forms
pdb|1TPF|B Chain B, Comparison Of The Structures And The Crystal Contacts Of
Trypanosomal Triosephosphate Isomerase In Four Different
Crystal Forms
pdb|1AG1|O Chain O, Monohydrogen Phosphate Binding To Trypanosomal
Triosephosphate Isomerase
pdb|1AG1|T Chain T, Monohydrogen Phosphate Binding To Trypanosomal
Triosephosphate Isomerase
pdb|1IIG|A Chain A, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphonopropionate
pdb|1IIG|B Chain B, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphonopropionate
pdb|1IIH|A Chain A, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphoglycerate
pdb|1IIH|B Chain B, Structure Of Trypanosoma Brucei Brucei Triosephosphate
Isomerase Complexed With 3-Phosphoglycerate
pdb|2V5L|A Chain A, Structures Of The Open And Closed State Of Trypanosomal
Triosephosphate Isomerase: As Observed In A New Crystal
Form: Implications For The Reaction Mechanism
pdb|2V5L|B Chain B, Structures Of The Open And Closed State Of Trypanosomal
Triosephosphate Isomerase: As Observed In A New Crystal
Form: Implications For The Reaction Mechanism
Length = 250
Score = 158 bits (400), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 116/187 (62%), Gaps = 23/187 (12%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSWVG 99
NWKCNG+++S+++L+ N + DV + IAAQN+ +
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA-IA 69
Query: 100 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 159
K GAFTGE+S+ LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 KSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 129
Query: 160 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 217
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 130 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHAL 189
Query: 218 LRDWLKN 224
+R W+ +
Sbjct: 190 IRSWVSS 196
>pdb|3TIM|A Chain A, The Crystal Structure Of The "open" And The "closed"
Conformation Of The Flexible Loop Of Trypanosomal
Triosephosphate Isomerase
pdb|3TIM|B Chain B, The Crystal Structure Of The "open" And The "closed"
Conformation Of The Flexible Loop Of Trypanosomal
Triosephosphate Isomerase
pdb|1TSI|A Chain A, Structure Of The Complex Between Trypanosomal
Triosephosphate Isomerase And N-Hydroxy-4-Phosphono-
Butanamide: Binding At The Active Site Despite An "open"
Flexible Loop
pdb|1TSI|B Chain B, Structure Of The Complex Between Trypanosomal
Triosephosphate Isomerase And N-Hydroxy-4-Phosphono-
Butanamide: Binding At The Active Site Despite An "open"
Flexible Loop
pdb|1TPE| Chain , Triosephosphate Isomerase (E.C.5.3.1.1)
pdb|1TPE|A Chain A, Comparison Of The Structures And The Crystal Contacts Of
Trypanosomal Triosephosphate Isomerase In Four Different
Crystal Forms
Length = 250
Score = 158 bits (399), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 116/187 (62%), Gaps = 23/187 (12%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSWVG 99
NWKCNG+++S+++L+ N + DV + IAAQN+ +
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA-IA 69
Query: 100 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 159
K GAFTGE+S+ LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 KSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 129
Query: 160 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 217
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 130 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHAL 189
Query: 218 LRDWLKN 224
+R W+ +
Sbjct: 190 IRSWVSS 196
>pdb|3KRS|A Chain A, Structure Of Triosephosphate Isomerase From
Cryptosporidium Parvum At 1.55a Resolution
pdb|3KRS|B Chain B, Structure Of Triosephosphate Isomerase From
Cryptosporidium Parvum At 1.55a Resolution
Length = 271
Score = 156 bits (395), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 107/194 (55%), Gaps = 22/194 (11%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAK------------LEADVDR----------IEI 91
K+FVGGN+KCNGTKES+ L+ + L + + +I
Sbjct: 25 KYFVGGNFKCNGTKESLKTLIDSFKQVESSNSEVYVFPTSLHISLVKEFFGNDHPGVFKI 84
Query: 92 AAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
+QN GAFTGE+S E LKD+ ++GHSERR E DQ + K L GL
Sbjct: 85 GSQNISCTGNGAFTGEVSCEMLKDMDVDCSLVGHSERRQYYSETDQIVNNKVKKGLENGL 144
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQA 211
++ CIGE L ERE GKT DV +QL + N+VIAYEP+WAIGTG VATP QA
Sbjct: 145 KIVLCIGESLSERETGKTNDVIQKQLTEALKDVSDLSNLVIAYEPIWAIGTGVVATPGQA 204
Query: 212 QEVHAALRDWLKNM 225
QE HA +R+++ M
Sbjct: 205 QEAHAFIREYVTRM 218
>pdb|2V0T|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|B Chain B, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|C Chain C, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|D Chain D, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|E Chain E, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|F Chain F, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|G Chain G, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V0T|H Chain H, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2C|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
Length = 250
Score = 156 bits (395), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 115/187 (61%), Gaps = 23/187 (12%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSWVG 99
NWKCNG+++S+++L+ N + DV + IAAQN+ +
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA-IA 69
Query: 100 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 159
K GAFTGE+S+ LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 KSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 129
Query: 160 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 217
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKV TP+QAQE HA
Sbjct: 130 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVLTPQQAQEAHAL 189
Query: 218 LRDWLKN 224
+R W+ +
Sbjct: 190 IRSWVSS 196
>pdb|1KV5|A Chain A, Structure Of Trypanosoma Brucei Brucei Tim With The
Salt-Bridge- Forming Residue Arg191 Mutated To Ser
pdb|1KV5|B Chain B, Structure Of Trypanosoma Brucei Brucei Tim With The
Salt-Bridge- Forming Residue Arg191 Mutated To Ser
Length = 250
Score = 155 bits (393), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 115/187 (61%), Gaps = 23/187 (12%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSWVG 99
NWKCNG+++S+++L+ N + DV + IAAQN+ +
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA-IA 69
Query: 100 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 159
K GAFTGE+S+ LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 KSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 129
Query: 160 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 217
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 130 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHAL 189
Query: 218 LRDWLKN 224
+ W+ +
Sbjct: 190 ISSWVSS 196
>pdb|2VFD|A Chain A, Crystal Structure Of The F96s Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFD|B Chain B, Crystal Structure Of The F96s Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFE|A Chain A, Crystal Structure Of F96s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase With 3-Phosphoglycerate Bound
At The Dimer Interface
pdb|2VFE|B Chain B, Crystal Structure Of F96s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase With 3-Phosphoglycerate Bound
At The Dimer Interface
Length = 248
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 112/193 (58%), Gaps = 24/193 (12%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDRIEIAA-------------------- 93
K+FV NWKCNGT ESI L + N+ L+ D ++++
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNN--LDFDPSKLDVVVFPVSVHYDHTRKLLQSKFST 61
Query: 94 --QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
QN G++TGE+S E KD+ ++V++GHSERR E D+ + +K +L L
Sbjct: 62 GIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHSERRKYFHETDEDVREKLQASLKNNL 121
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQA 211
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQA
Sbjct: 122 KAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQA 181
Query: 212 QEVHAALRDWLKN 224
Q VH +R +K+
Sbjct: 182 QLVHKEIRKIVKD 194
>pdb|2J24|A Chain A, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
pdb|2J24|B Chain B, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
pdb|2J27|A Chain A, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
pdb|2J27|B Chain B, The Functional Role Of The Conserved Active Site Proline
Of Triosephosphate Isomerase
Length = 250
Score = 154 bits (390), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/187 (47%), Positives = 115/187 (61%), Gaps = 23/187 (12%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSWVG 99
NWKCNG+++S+++L+ N + DV + IAAQN+ +
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA-IA 69
Query: 100 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 159
K GAFTGE+S+ LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 KSGAFTGEVSLPILKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 129
Query: 160 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 217
LQERE+G+T V Q+ A A + W VVIAYE VWAIGTGKVATP+QAQE HA
Sbjct: 130 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEAVWAIGTGKVATPQQAQEAHAL 189
Query: 218 LRDWLKN 224
+R W+ +
Sbjct: 190 IRSWVSS 196
>pdb|2VFF|A Chain A, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFF|B Chain B, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase
pdb|2VFG|A Chain A, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
pdb|2VFG|B Chain B, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
pdb|2VFG|C Chain C, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
pdb|2VFG|D Chain D, Crystal Structure Of The F96h Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase With 3-
Phosphoglycerate Bound At The Dimer Interface
Length = 248
Score = 153 bits (386), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 111/193 (57%), Gaps = 24/193 (12%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDRIEIAA-------------------- 93
K+FV NWKCNGT ESI L + N+ L+ D ++++
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNN--LDFDPSKLDVVVFPVSVHYDHTRKLLQSKFST 61
Query: 94 --QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
QN G++TGE+S E KD+ ++V++GH ERR E D+ + +K +L L
Sbjct: 62 GIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHHERRKYFHETDEDVREKLQASLKNNL 121
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQA 211
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQA
Sbjct: 122 KAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQA 181
Query: 212 QEVHAALRDWLKN 224
Q VH +R +K+
Sbjct: 182 QLVHKEIRKIVKD 194
>pdb|1YDV|A Chain A, Triosephosphate Isomerase (Tim)
pdb|1YDV|B Chain B, Triosephosphate Isomerase (Tim)
pdb|1M7O|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog 3-Phosphoglycerate (3pg)
pdb|1M7O|B Chain B, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog 3-Phosphoglycerate (3pg)
pdb|1M7P|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog Glycerol-3-Phosphate (G3p).
pdb|1M7P|B Chain B, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)
Compled To Substrate Analog Glycerol-3-Phosphate (G3p).
pdb|1LYX|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase (Pftim)-
Phosphoglycolate Complex
pdb|1LZO|A Chain A, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1LZO|B Chain B, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1LZO|C Chain C, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1LZO|D Chain D, Plasmodium Falciparum Triosephosphate Isomerase-
Phosphoglycolate Complex
pdb|1O5X|A Chain A, Plasmodium Falciparum Tim Complexed To 2-Phosphoglycerate
pdb|1O5X|B Chain B, Plasmodium Falciparum Tim Complexed To 2-Phosphoglycerate
pdb|2VFI|A Chain A, Crystal Structure Of The Plasmodium Falciparum
Triosephosphate Isomerase In The Loop Closed State With
3- Phosphoglycerate Bound At The Active Site And
Interface
pdb|2VFI|B Chain B, Crystal Structure Of The Plasmodium Falciparum
Triosephosphate Isomerase In The Loop Closed State With
3- Phosphoglycerate Bound At The Active Site And
Interface
Length = 248
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 111/193 (57%), Gaps = 24/193 (12%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDRIEIAA-------------------- 93
K+FV NWKCNGT ESI L + N+ L+ D ++++
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNN--LDFDPSKLDVVVFPVSVHYDHTRKLLQSKFST 61
Query: 94 --QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
QN G++TGE+S E KD+ ++V++GH ERR E D+ + +K +L L
Sbjct: 62 GIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNL 121
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQA 211
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQA
Sbjct: 122 KAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQA 181
Query: 212 QEVHAALRDWLKN 224
Q VH +R +K+
Sbjct: 182 QLVHKEIRKIVKD 194
>pdb|2V5B|A Chain A, The Monomerization Of Triosephosphate Isomerase From
Trypanosoma Cruzi
Length = 244
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/189 (44%), Positives = 106/189 (56%), Gaps = 30/189 (15%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSW 97
NWKCNG++ + L+ LN A + DV + +IAAQN+
Sbjct: 10 AANWKCNGSESLLVPLIETLNAATFDHDVQCVVAPTFLHIPMTKARLTNPKFQIAAQNA- 68
Query: 98 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 157
G A LKD G WVVLGHSERR GE ++ + +K A A + G VI C+
Sbjct: 69 -GNADALAS------LKDYGISWVVLGHSERRLYYGETNEIVAEKVAQAXAAGFHVIVCV 121
Query: 158 GEQLQEREAGKTFDVCFQQLKAYADAIP--SWDNVVIAYEPVWAIGTGKVATPEQAQEVH 215
GE +EREAG+T V QL A A + +W VVIAYEPVWAIGTGKVATP+QAQEVH
Sbjct: 122 GETNEEREAGRTAAVVLTQLAAVAQKLSKEAWSRVVIAYEPVWAIGTGKVATPQQAQEVH 181
Query: 216 AALRDWLKN 224
LR W+++
Sbjct: 182 ELLRRWVRS 190
>pdb|3PSW|A Chain A, Structure Of E97q Mutant Of Tim From Plasmodium Falciparum
pdb|3PSW|B Chain B, Structure Of E97q Mutant Of Tim From Plasmodium Falciparum
Length = 248
Score = 151 bits (381), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 24/193 (12%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDRIEIAA-------------------- 93
K+FV NWKCNGT ESI L + N+ L+ D ++++
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNN--LDFDPSKLDVVVFPVSVHYDHTRKLLQSKFST 61
Query: 94 --QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
QN G++TGE+S E KD+ ++V++GH +RR E D+ + +K +L L
Sbjct: 62 GIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFQRRKYFHETDEDVREKLQASLKNNL 121
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQA 211
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQA
Sbjct: 122 KAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQA 181
Query: 212 QEVHAALRDWLKN 224
Q VH +R +K+
Sbjct: 182 QLVHKEIRKIVKD 194
>pdb|3PSV|A Chain A, Structure Of E97d Mutant Of Tim From Plasmodium Falciparum
pdb|3PSV|B Chain B, Structure Of E97d Mutant Of Tim From Plasmodium Falciparum
Length = 248
Score = 151 bits (381), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 24/193 (12%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDRIEIAA-------------------- 93
K+FV NWKCNGT ESI L + N+ L+ D ++++
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNN--LDFDPSKLDVVVFPVSVHYDHTRKLLQSKFST 61
Query: 94 --QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
QN G++TGE+S E KD+ ++V++GH +RR E D+ + +K +L L
Sbjct: 62 GIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFDRRKYFHETDEDVREKLQASLKNNL 121
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQA 211
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQA
Sbjct: 122 KAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQA 181
Query: 212 QEVHAALRDWLKN 224
Q VH +R +K+
Sbjct: 182 QLVHKEIRKIVKD 194
>pdb|1B9B|A Chain A, Triosephosphate Isomerase Of Thermotoga Maritima
pdb|1B9B|B Chain B, Triosephosphate Isomerase Of Thermotoga Maritima
Length = 255
Score = 150 bits (380), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 86/199 (43%), Positives = 117/199 (58%), Gaps = 23/199 (11%)
Query: 53 NKFFVGGNWKCNGT----KESITKLVSDLNDAK-LEADV----------------DRIEI 91
K + GNWK + T K+ ++ LV++L+D K E V I++
Sbjct: 3 RKLILAGNWKMHKTISEAKKFVSLLVNELHDVKEFEIVVCPPFTALSEVGEILSGRNIKL 62
Query: 92 AAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
AQN + GAFTGEIS L++IG ++V++GHSERR + EDD+FI +K L +G+
Sbjct: 63 GAQNVFYEDQGAFTGEISPLMLQEIGVEYVIVGHSERRRIFKEDDEFINRKVKAVLEKGM 122
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKA--YADAIPSWDNVVIAYEPVWAIGTGKVATPE 209
I C+GE L+ERE G TF V +Q++ Y VVIAYEPVWAIGTG+VATP+
Sbjct: 123 TPILCVGETLEEREKGLTFCVVEKQVREGFYGLDKEEAKRVVIAYEPVWAIGTGRVATPQ 182
Query: 210 QAQEVHAALRDWLKNMSQQ 228
QAQEVHA +R L M +
Sbjct: 183 QAQEVHAFIRKLLSEMYDE 201
>pdb|2VFH|A Chain A, Crystal Structure Of The F96w Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase Complexed With 3-
Phosphoglycerate
pdb|2VFH|B Chain B, Crystal Structure Of The F96w Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase Complexed With 3-
Phosphoglycerate
Length = 248
Score = 150 bits (380), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 111/193 (57%), Gaps = 24/193 (12%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDRIEIAA-------------------- 93
K+FV NWKCNGT ESI L + N+ L+ D ++++
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNN--LDFDPSKLDVVVFPVSVHYDHTRKLLQSKFST 61
Query: 94 --QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
QN G++TGE+S E KD+ ++V++GH ERR E D+ + +K +L L
Sbjct: 62 GIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHWERRKYFHETDEDVREKLQASLKNNL 121
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQA 211
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQA
Sbjct: 122 KAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQA 181
Query: 212 QEVHAALRDWLKN 224
Q VH +R +K+
Sbjct: 182 QLVHKEIRKIVKD 194
>pdb|1VGA|A Chain A, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1VGA|B Chain B, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1VGA|C Chain C, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1VGA|D Chain D, Structures Of Unligated And Inhibitor Complexes Of W168f
Mutant Of Triosephosphate Isomerase From Plasmodium
Falciparum
pdb|1WOA|A Chain A, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOA|B Chain B, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOA|C Chain C, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOA|D Chain D, Structure Of The Loop6 Hinge Mutant Of Plasmodium
Falciparum Triosephosphate Isomerase, W168f, Complexed
With Glycerol-2-Phosphate
pdb|1WOB|A Chain A, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
pdb|1WOB|B Chain B, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
pdb|1WOB|C Chain C, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
pdb|1WOB|D Chain D, Structure Of A Loop6 Hinge Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase, W168f, Complexed To Sulfate
Length = 248
Score = 150 bits (379), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 111/193 (57%), Gaps = 24/193 (12%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDRIEIAA-------------------- 93
K+FV NWKCNGT ESI L + N+ L+ D ++++
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNN--LDFDPSKLDVVVFPVSVHYDHTRKLLQSKFST 61
Query: 94 --QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
QN G++TGE+S E KD+ ++V++GH ERR E D+ + +K +L L
Sbjct: 62 GIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNL 121
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQA 211
+ C GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP++AIGTGK ATPEQA
Sbjct: 122 KAVVCFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLFAIGTGKTATPEQA 181
Query: 212 QEVHAALRDWLKN 224
Q VH +R +K+
Sbjct: 182 QLVHKEIRKIVKD 194
>pdb|3PWA|A Chain A, Structure Of C126a Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
pdb|3PWA|B Chain B, Structure Of C126a Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
Length = 248
Score = 149 bits (376), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 110/193 (56%), Gaps = 24/193 (12%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDRIEIAA-------------------- 93
K+FV NWKCNGT ESI L + N+ L+ D ++++
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNN--LDFDPSKLDVVVFPVSVHYDHTRKLLQSKFST 61
Query: 94 --QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
QN G++TGE+S E KD+ ++V++GH ERR E D+ + +K +L L
Sbjct: 62 GIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNL 121
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQA 211
+ GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQA
Sbjct: 122 KAVVAFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQA 181
Query: 212 QEVHAALRDWLKN 224
Q VH +R +K+
Sbjct: 182 QLVHKEIRKIVKD 194
>pdb|3PVF|A Chain A, Structure Of C126s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase Complexed With Pga
pdb|3PY2|A Chain A, Structure Of C126s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
pdb|3PY2|B Chain B, Structure Of C126s Mutant Of Plasmodium Falciparum
Triosephosphate Isomerase
Length = 248
Score = 149 bits (375), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 110/193 (56%), Gaps = 24/193 (12%)
Query: 54 KFFVGGNWKCNGTKESITKLVSDLNDAKLEADVDRIEIAA-------------------- 93
K+FV NWKCNGT ESI L + N+ L+ D ++++
Sbjct: 4 KYFVAANWKCNGTLESIKSLTNSFNN--LDFDPSKLDVVVFPVSVHYDHTRKLLQSKFST 61
Query: 94 --QNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
QN G++TGE+S E KD+ ++V++GH ERR E D+ + +K +L L
Sbjct: 62 GIQNVSKFGNGSYTGEVSAEIAKDLNIEYVIIGHFERRKYFHETDEDVREKLQASLKNNL 121
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQA 211
+ GE L++RE KT +V +Q+KA+ D I ++DNV++ YEP+WAIGTGK ATPEQA
Sbjct: 122 KAVVSFGESLEQREQNKTIEVITKQVKAFVDLIDNFDNVILVYEPLWAIGTGKTATPEQA 181
Query: 212 QEVHAALRDWLKN 224
Q VH +R +K+
Sbjct: 182 QLVHKEIRKIVKD 194
>pdb|1TRE|A Chain A, The Structure Of Triosephosphate Isomerase From
Escherichia Coli Determined At 2.6 Angstrom Resolution
pdb|1TRE|B Chain B, The Structure Of Triosephosphate Isomerase From
Escherichia Coli Determined At 2.6 Angstrom Resolution
Length = 255
Score = 148 bits (374), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 113/202 (55%), Gaps = 27/202 (13%)
Query: 56 FVGGNWKCNGTKESITKLVSDLND---------------------AKLEADVDRIEIAAQ 94
V GNWK NG++ + +LVS+L AK EA+ I + AQ
Sbjct: 5 LVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQ 64
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGE S LKDIG +++++GHSERR E D+ I KK A +GL +
Sbjct: 65 NVNLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPV 124
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAY--ADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQ 212
CIGE E EAGKT +VC +Q+ A +++ VIAYEPVWAIGTGK ATP QAQ
Sbjct: 125 LCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQ 184
Query: 213 EVHAALRDWL----KNMSQQTL 230
VH +RD + N+++Q +
Sbjct: 185 AVHKFIRDHIAKVDANIAEQVI 206
>pdb|4IOT|A Chain A, High-resolution Structure Of Triosephosphate Isomerase
From E. Coli
pdb|4IOT|B Chain B, High-resolution Structure Of Triosephosphate Isomerase
From E. Coli
Length = 255
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 113/202 (55%), Gaps = 27/202 (13%)
Query: 56 FVGGNWKCNGTKESITKLVSDLND---------------------AKLEADVDRIEIAAQ 94
V GNWK NG++ + +LVS+L AK EA+ I + AQ
Sbjct: 5 LVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQ 64
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGE S LKDIG +++++GHSERR E D+ I KK A +GL +
Sbjct: 65 NVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPV 124
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAY--ADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQ 212
CIGE E EAGKT +VC +Q+ A +++ VIAYEPVWAIGTGK ATP QAQ
Sbjct: 125 LCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQ 184
Query: 213 EVHAALRDWL----KNMSQQTL 230
VH +RD + N+++Q +
Sbjct: 185 AVHKFIRDHIAKVDANIAEQVI 206
>pdb|1TMH|A Chain A, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
pdb|1TMH|B Chain B, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
pdb|1TMH|C Chain C, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
pdb|1TMH|D Chain D, Modular Mutagenesis Of A Tim-barrel Enzyme: The Crystal
Structure Of A Chimeric E. Coli Tim Having The Eighth
(beta-alpha)-unit Replaced By The Equivalent Unit Of
Chicken Tim
Length = 254
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 113/202 (55%), Gaps = 27/202 (13%)
Query: 56 FVGGNWKCNGTKESITKLVSDLND---------------------AKLEADVDRIEIAAQ 94
V GNWK NG++ + +LVS+L AK EA+ I + AQ
Sbjct: 5 LVMGNWKLNGSRHMVHELVSNLRKELAGVAGCAVAIAPPEMYIDMAKREAEGSHIMLGAQ 64
Query: 95 NSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVI 154
N + GAFTGE S LKDIG +++++GHSERR E D+ I KK A +GL +
Sbjct: 65 NVDLNLSGAFTGETSAAMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPV 124
Query: 155 ACIGEQLQEREAGKTFDVCFQQLKAY--ADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQ 212
CIGE E EAGKT +VC +Q+ A +++ VIAYEPVWAIGTGK ATP QAQ
Sbjct: 125 LCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQ 184
Query: 213 EVHAALRDWL----KNMSQQTL 230
VH +RD + N+++Q +
Sbjct: 185 AVHKFIRDHIAKVDANIAEQVI 206
>pdb|2Y6Z|A Chain A, Crystallographic Structure Of Gm23 An Example Of Catalytic
Migration From Tim To Thiamin Phosphate Synthase
Length = 256
Score = 139 bits (350), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 103/184 (55%), Gaps = 22/184 (11%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEADVDRIEIAAQNSWVGKGGAFTGEI----------- 108
NWKCNG +S+++L+ N + DV + SW A T E
Sbjct: 22 NWKCNGGGQSLSELIDLFNSTSINHDV---QCVVAPSWYMGAQAMTKERLSHPKFVIAAQ 78
Query: 109 ------SVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQLQ 162
++ LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE LQ
Sbjct: 79 NAGNADALASLKDFGISWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGETLQ 138
Query: 163 EREAGKTFDVCFQQLKAYADAI--PSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRD 220
ER +G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA +R
Sbjct: 139 ERSSGRTAVVVLTQITAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHALIRS 198
Query: 221 WLKN 224
W+ +
Sbjct: 199 WVSS 202
>pdb|2Y70|A Chain A, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase.
pdb|2Y70|B Chain B, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase.
pdb|2Y70|C Chain C, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase.
pdb|2Y70|D Chain D, Crystallographic Structure Of Gm23, Mutant G89d, An
Example Of Catalytic Migration From Tim To Thiamin
Phosphate Synthase
Length = 245
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 104/188 (55%), Gaps = 22/188 (11%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEADVDRIEIAAQNSWVGKGGAFTGEI------- 108
NWKCNG+++S+++L+ N + DV + SW A T E
Sbjct: 7 IAAANWKCNGSQQSLSELIDLFNSTSINHDV---QCVVAPSWYMGAQAMTKERLSHPKFV 63
Query: 109 ----------SVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIG 158
++ LKD G W+VL HSERR GE ++ + K A A++ G VIACIG
Sbjct: 64 IAAQNAGNADALASLKDFGISWIVLDHSERRAYYGETNEIVADKVAAAVASGFMVIACIG 123
Query: 159 EQLQEREAGKTFDVCFQQLKAYADAI--PSWDNVVIAYEPVWAIGTGKVATPEQAQEVHA 216
E LQER +G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 124 ETLQERSSGRTAVVVLTQITAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHA 183
Query: 217 ALRDWLKN 224
+R W+ +
Sbjct: 184 LIRSWVSS 191
>pdb|1MSS|A Chain A, Large Scale Structural Rearrangements Of The Front Loops
In Monomerised Triosephosphate Isomerase, As Deduced
From The Comparison Of The Structural Properties Of
Monotim And Its Point Mutation Variant Monoss
pdb|1MSS|B Chain B, Large Scale Structural Rearrangements Of The Front Loops
In Monomerised Triosephosphate Isomerase, As Deduced
From The Comparison Of The Structural Properties Of
Monotim And Its Point Mutation Variant Monoss
pdb|1TTJ|A Chain A, Three New Crystal Structures Of Point Mutation Variants Of
Monotim: Conformational Flexibility Of Loop-1,Loop-4 And
Loop-8
Length = 243
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 107/187 (57%), Gaps = 30/187 (16%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSWVG 99
NWKCNG+++S+++L+ N + DV + IAAQN+ G
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTSSHLAMTKERLSHPKFVIAAQNA--G 68
Query: 100 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 159
A LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 69 NADALA------SLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 122
Query: 160 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 217
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 123 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHAL 182
Query: 218 LRDWLKN 224
+R W+ +
Sbjct: 183 IRSWVSS 189
>pdb|2WSQ|A Chain A, Monotim Mutant Rmm0-1, Dimeric Form.
pdb|2WSQ|B Chain B, Monotim Mutant Rmm0-1, Dimeric Form.
pdb|2WSQ|C Chain C, Monotim Mutant Rmm0-1, Dimeric Form.
pdb|2WSQ|D Chain D, Monotim Mutant Rmm0-1, Dimeric Form
Length = 242
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 107/187 (57%), Gaps = 30/187 (16%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSWVG 99
NWKCNG+++S+++L+ N + DV + IAAQN+
Sbjct: 10 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVAPSFVHLAMTKERLSHPKFVIAAQNAGNA 69
Query: 100 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 159
G A LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 DGLA--------SLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 121
Query: 160 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 217
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 122 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQETHAL 181
Query: 218 LRDWLKN 224
+R W+ +
Sbjct: 182 IRSWVSS 188
>pdb|2WSR|A Chain A, Monotim Mutant Rmm0-1, Monomeric Form
Length = 242
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 107/187 (57%), Gaps = 30/187 (16%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSWVG 99
NWKCNG+++S+++L+ N + DV + IAAQN+
Sbjct: 10 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVAPRFVMIAMTKERLSHPKFVIAAQNAGNA 69
Query: 100 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 159
G A LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 70 DGLA--------SLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 121
Query: 160 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 217
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 122 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQETHAL 181
Query: 218 LRDWLKN 224
+R W+ +
Sbjct: 182 IRSWVSS 188
>pdb|1TRI|A Chain A, The Crystal Structure Of An Engineered Monomeric
Triosephosphate Isomerase, Monotim: The Correct
Modelling Of An Eight-Residue Loop
Length = 243
Score = 137 bits (346), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 107/187 (57%), Gaps = 30/187 (16%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSWVG 99
NWKCNG+++S+++L+ N + DV + IAAQN+ G
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA--G 68
Query: 100 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 159
A LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 69 NADALA------SLKDFGVNWIVLGHSERRAYYGETNEIVADKVAAAVASGFMVIACIGE 122
Query: 160 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 217
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 123 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHAL 182
Query: 218 LRDWLKN 224
+R W+ +
Sbjct: 183 IRSWVSS 189
>pdb|1TTI|A Chain A, Three New Crystal Structures Of Point Mutation Variants Of
Monotim: Conformational Flexibility Of Loop-1,Loop-4 And
Loop-8
Length = 243
Score = 136 bits (343), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 83/187 (44%), Positives = 107/187 (57%), Gaps = 30/187 (16%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSWVG 99
NWKCNG+++S+++L+ N + DV + IAAQN+
Sbjct: 11 NWKCNGSQQSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNAGNA 70
Query: 100 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 159
G A LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 71 DGLA--------SLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACIGE 122
Query: 160 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 217
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 123 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHAL 182
Query: 218 LRDWLKN 224
+R W+ +
Sbjct: 183 IRSWVSS 189
>pdb|1AW1|A Chain A, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|B Chain B, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|D Chain D, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|E Chain E, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|G Chain G, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|H Chain H, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|J Chain J, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW1|K Chain K, Triosephosphate Isomerase Of Vibrio Marinus Complexed With
2-Phosphoglycolate
pdb|1AW2|A Chain A, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|B Chain B, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|D Chain D, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|E Chain E, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|G Chain G, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|H Chain H, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|J Chain J, Triosephosphate Isomerase Of Vibrio Marinus
pdb|1AW2|K Chain K, Triosephosphate Isomerase Of Vibrio Marinus
Length = 256
Score = 135 bits (340), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 109/197 (55%), Gaps = 27/197 (13%)
Query: 57 VGGNWKCNGTKESITKLVSDLNDAKLEA----DV--------------------DRIEIA 92
V GNWK NG+KE + L++ LN A+LE DV I +
Sbjct: 6 VMGNWKLNGSKEMVVDLLNGLN-AELEGVTGVDVAVAPPALFVDLAERTLTEAGSAIILG 64
Query: 93 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 152
AQN+ + GAFTG++S LK+ G +++GHSERR E D+F+ KK A+ GL
Sbjct: 65 AQNTDLNNSGAFTGDMSPAMLKEFGATHIIIGHSERREYHAESDEFVAKKFAFLKENGLT 124
Query: 153 VIACIGEQLQEREAGKTFDVCFQQLKAYAD--AIPSWDNVVIAYEPVWAIGTGKVATPEQ 210
+ CIGE + EAG+T VC +QL A + + + + +IAYEP+WAIGTGK AT E
Sbjct: 125 PVLCIGESDAQNEAGETMAVCARQLDAVINTQGVEALEGAIIAYEPIWAIGTGKAATAED 184
Query: 211 AQEVHAALRDWLKNMSQ 227
AQ +HA +R + S+
Sbjct: 185 AQRIHAQIRAHIAEKSE 201
>pdb|1ML1|A Chain A, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|C Chain C, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|E Chain E, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|G Chain G, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|I Chain I, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
pdb|1ML1|K Chain K, Protein Engineering With Monomeric Triosephosphate
Isomerase: The Modelling And Structure Verification Of A
Seven Residue Loop
Length = 243
Score = 134 bits (337), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 82/187 (43%), Positives = 106/187 (56%), Gaps = 30/187 (16%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSWVG 99
NWKC+G+ +S+++L+ N + DV + IAAQN+ G
Sbjct: 11 NWKCSGSPDSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA--G 68
Query: 100 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 159
A LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 69 NADALA------SLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACIGE 122
Query: 160 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 217
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE HA
Sbjct: 123 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAHAL 182
Query: 218 LRDWLKN 224
+R W+ +
Sbjct: 183 IRSWVSS 189
>pdb|1YYA|A Chain A, Crystal Structure Of Tt0473, Putative Triosephosphate
Isomerase From Thermus Thermophilus Hb8
pdb|1YYA|B Chain B, Crystal Structure Of Tt0473, Putative Triosephosphate
Isomerase From Thermus Thermophilus Hb8
Length = 250
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 104/192 (54%), Gaps = 22/192 (11%)
Query: 53 NKFFVGGNWKCNGTKES-------ITKLVSDL-NDAKLEADVDRIEIA------------ 92
+ V GNWK + T + +L+ L ++A + + +A
Sbjct: 2 RRVLVAGNWKMHKTPSEARVWFAELKRLLPPLQSEAAVLPAFPILPVAKEVLAETQVGYG 61
Query: 93 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 152
AQ+ K GA+TGE+S L D+GC++ ++GHSERR GE D + +KA L EG+
Sbjct: 62 AQDVSAHKEGAYTGEVSARMLSDLGCRYAIVGHSERRRYHGETDALVAEKAKRLLEEGIT 121
Query: 153 VIACIGEQLQEREAGKTFDVCFQQLKAYADAI--PSWDNVVIAYEPVWAIGTGKVATPEQ 210
I C+GE L+ RE G+ +QL+ + + P + +VIAYEPVWAIGTGK ATPE
Sbjct: 122 PILCVGEPLEVREKGEAVPYTLRQLRGSLEGVEPPGPEALVIAYEPVWAIGTGKNATPED 181
Query: 211 AQEVHAALRDWL 222
A+ +H A+R L
Sbjct: 182 AEAMHQAIRKAL 193
>pdb|2BTM|A Chain A, Does The His12-Lys13 Pair Play A Role In The Adaptation Of
Thermophilic Tims To High Temperatures?
pdb|2BTM|B Chain B, Does The His12-Lys13 Pair Play A Role In The Adaptation Of
Thermophilic Tims To High Temperatures?
Length = 252
Score = 129 bits (323), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/196 (39%), Positives = 101/196 (51%), Gaps = 23/196 (11%)
Query: 53 NKFFVGGNWKCNGTKESITKLVSDLNDAKLEAD------------VDRI---------EI 91
K + GNWK NGT + V D+ AD +DR+ +I
Sbjct: 1 RKPIIAGNWKMNGTLAEAVQFVEDVKGHVPPADEVISVVCAPFLFLDRLVQAADGTDLKI 60
Query: 92 AAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
AQ GA+TGE+S LKD+G +V+LGHSERR + E D+ + KK A + GL
Sbjct: 61 GAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGL 120
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQL-KAYADAIPSW-DNVVIAYEPVWAIGTGKVATPE 209
I C GE L+EREAG+T V Q+ KA A P VIAYEP+WAIGTGK +TPE
Sbjct: 121 IPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTPE 180
Query: 210 QAQEVHAALRDWLKNM 225
A V +R + +
Sbjct: 181 DANSVCGHIRSVVSRL 196
>pdb|1DKW|A Chain A, Crystal Structure Of Triose-Phosphate Isomerase With
Modified Substrate Binding Site
pdb|1DKW|B Chain B, Crystal Structure Of Triose-Phosphate Isomerase With
Modified Substrate Binding Site
Length = 238
Score = 127 bits (320), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 106/189 (56%), Gaps = 31/189 (16%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSW 97
NWK +G+ +S+++L+ N + DV + IAAQN+
Sbjct: 8 AANWK-SGSPDSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 65
Query: 98 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 157
E S+ LKD G W+VLGHSERR GE ++ + K A A++ G VIACI
Sbjct: 66 -------GNEDSLPSLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACI 118
Query: 158 GEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVH 215
GE LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE H
Sbjct: 119 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 178
Query: 216 AALRDWLKN 224
A +R W+ +
Sbjct: 179 ALIRSWVSS 187
>pdb|2VEK|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEK|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEL|A Chain A, Structure-based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEL|B Chain B, Structure-based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEM|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEM|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEN|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEN|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2X16|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X16|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1R|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1R|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1S|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1S|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1T|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1T|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1U|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X1U|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X2G|A Chain A, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
pdb|2X2G|B Chain B, Crystallographic Binding Studies With An Engineered
Monomeric Variant Of Triosephosphate Isomerase
Length = 238
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 105/189 (55%), Gaps = 31/189 (16%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSW 97
NWK +G+ +S+++L+ N + DV + IAAQN+
Sbjct: 8 AANWK-SGSPDSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 65
Query: 98 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 157
G A LKD G W+VLGHSERR GE ++ + K A A++ G VIACI
Sbjct: 66 -GNADALA------SLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACI 118
Query: 158 GEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVH 215
GE LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE H
Sbjct: 119 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 178
Query: 216 AALRDWLKN 224
A +R W+ +
Sbjct: 179 ALIRSWVSS 187
>pdb|3M9Y|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 1.9
Angstrom Resolution
pdb|3M9Y|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 1.9
Angstrom Resolution
Length = 254
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 104/198 (52%), Gaps = 25/198 (12%)
Query: 56 FVGGNWKCNGTKESITKLVS---DLNDAK--------------------LEADVDRIEIA 92
+ GNWK N T + V+ L D+K E +EI
Sbjct: 6 IIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIG 65
Query: 93 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 152
AQN++ GAFTGE S L D+G K+VV+GHSERR + E D+ I KKA G+
Sbjct: 66 AQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMT 125
Query: 153 VIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQ 210
I C+GE +ERE+GK DV +Q+K + +VVIAYEP+WAIGTGK +T E
Sbjct: 126 PIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSED 185
Query: 211 AQEVHAALRDWLKNMSQQ 228
A E+ A +R + ++S +
Sbjct: 186 ANEMCAFVRQTIADLSSK 203
>pdb|2VEI|A Chain A, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEI|B Chain B, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
pdb|2VEI|C Chain C, Structure-Based Enzyme Engineering Efforts With An
Inactive Monomeric Tim Variant: The Importance Of A
Single Point Mutation For Generating An Active Site With
Suitable Binding Properties
Length = 238
Score = 125 bits (315), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 105/189 (55%), Gaps = 31/189 (16%)
Query: 58 GGNWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSW 97
NWK +G+ +S+++L+ N + DV + IAAQN+
Sbjct: 8 AANWK-SGSPDSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA- 65
Query: 98 VGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACI 157
G A LKD G W+VLGHSERR GE ++ + K A A++ G VIACI
Sbjct: 66 -GNADALA------SLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACI 118
Query: 158 GEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVH 215
GE LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKVATP+QAQE H
Sbjct: 119 GETLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVATPQQAQEAH 178
Query: 216 AALRDWLKN 224
A +R W+ +
Sbjct: 179 ALIRSWVSS 187
>pdb|3UWU|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-3-Phosphate
pdb|3UWU|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-3-Phosphate
pdb|3UWV|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 2-Phosphoglyceric Acid
pdb|3UWV|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 2-Phosphoglyceric Acid
pdb|3UWW|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 3-Phosphoglyceric Acid
pdb|3UWW|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With 3-Phosphoglyceric Acid
pdb|3UWY|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 2.4
Angstrom Resolution
pdb|3UWY|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Methicillin Resistant Staphylococcus Aureus At 2.4
Angstrom Resolution
pdb|3UWZ|A Chain A, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-2-Phosphate
pdb|3UWZ|B Chain B, Crystal Structure Of Staphylococcus Aureus Triosephosphate
Isomerase Complexed With Glycerol-2-Phosphate
Length = 261
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 104/198 (52%), Gaps = 25/198 (12%)
Query: 56 FVGGNWKCNGTKESITKLVS---DLNDAK--------------------LEADVDRIEIA 92
+ GNWK N T + V+ L D+K E +EI
Sbjct: 13 IIAGNWKMNKTVQEAKDFVNALPTLPDSKEVESVICAPAIQLDALTTAVKEGKAQGLEIG 72
Query: 93 AQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLG 152
AQN++ GAFTGE S L D+G K+VV+GHSERR + E D+ I KKA G+
Sbjct: 73 AQNTYFEDNGAFTGETSPVALADLGVKYVVIGHSERRELFHETDEEINKKAHAIFKHGMT 132
Query: 153 VIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQ 210
I C+GE +ERE+GK DV +Q+K + +VVIAYEP+WAIGTGK +T E
Sbjct: 133 PIICVGETDEERESGKANDVVGEQVKKAVAGLSEDQLKSVVIAYEPIWAIGTGKSSTSED 192
Query: 211 AQEVHAALRDWLKNMSQQ 228
A E+ A +R + ++S +
Sbjct: 193 ANEMCAFVRQTIADLSSK 210
>pdb|1BTM|A Chain A, Triosephosphate Isomerase (Tim) Complexed With 2-
Phosphoglycolic Acid
pdb|1BTM|B Chain B, Triosephosphate Isomerase (Tim) Complexed With 2-
Phosphoglycolic Acid
Length = 252
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 76/196 (38%), Positives = 100/196 (51%), Gaps = 23/196 (11%)
Query: 53 NKFFVGGNWKCNGTKESITKLVSDLNDAKLEAD------------VDRI---------EI 91
K + GNWK + T + V D+ AD +DR+ +I
Sbjct: 1 RKPIIAGNWKMHKTLAEAVQFVEDVKGHVPPADEVISVVCAPFLFLDRLVQAADGTDLKI 60
Query: 92 AAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
AQ GA+TGE+S LKD+G +V+LGHSERR + E D+ + KK A + GL
Sbjct: 61 GAQTMHFADQGAYTGEVSPVMLKDLGVTYVILGHSERRQMFAETDETVNKKVLAAFTRGL 120
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQL-KAYADAIPSW-DNVVIAYEPVWAIGTGKVATPE 209
I C GE L+EREAG+T V Q+ KA A P VIAYEP+WAIGTGK +TPE
Sbjct: 121 IPIICCGESLEEREAGQTNAVVASQVEKALAGLTPEQVKQAVIAYEPIWAIGTGKSSTPE 180
Query: 210 QAQEVHAALRDWLKNM 225
A V +R + +
Sbjct: 181 DANSVCGHIRSVVSRL 196
>pdb|2V2D|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2H|A Chain A, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2H|B Chain B, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
pdb|2V2H|C Chain C, The A178l Mutation In The C-Terminal Hinge Of The Flexible
Loop-6 Of Triosephosphate Isomerase (Tim) Induces A More
Closed Conformation Of This Hinge Region In Dimeric And
Monomeric Tim
Length = 242
Score = 124 bits (310), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 80/187 (42%), Positives = 104/187 (55%), Gaps = 31/187 (16%)
Query: 60 NWKCNGTKESITKLVSDLNDAKLEADVD--------------------RIEIAAQNSWVG 99
NWK +G+ +S+++L+ N + DV + IAAQN+ G
Sbjct: 11 NWK-SGSPDSLSELIDLFNSTSINHDVQCVVASTFVHLAMTKERLSHPKFVIAAQNA--G 67
Query: 100 KGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE 159
A LKD G W+VLGHSERR GE ++ + K A A++ G VIACIGE
Sbjct: 68 NADALA------SLKDFGVNWIVLGHSERRWYYGETNEIVADKVAAAVASGFMVIACIGE 121
Query: 160 QLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVATPEQAQEVHAA 217
LQERE+G+T V Q+ A A + W VVIAYEPVWAIGTGKV TP+QAQE HA
Sbjct: 122 TLQERESGRTAVVVLTQIAAIAKKLKKADWAKVVIAYEPVWAIGTGKVLTPQQAQEAHAL 181
Query: 218 LRDWLKN 224
+R W+ +
Sbjct: 182 IRSWVSS 188
>pdb|3KXQ|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Bartonella Henselae At 1.6a Resolution
pdb|3KXQ|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Bartonella Henselae At 1.6a Resolution
Length = 275
Score = 115 bits (289), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/185 (36%), Positives = 94/185 (50%), Gaps = 26/185 (14%)
Query: 56 FVGGNWKCNGTKESITKLVSDLNDAKLEADVDR------------------------IEI 91
F+ GNWK NGT ES+ +L + A + +D+ R I +
Sbjct: 29 FIAGNWKMNGTGESLGELRAI--AAGISSDLGRLFEALICVPATLLSRAFDILGGENILL 86
Query: 92 AAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGL 151
QN G +TG+IS LK+ G V++GHSERR V E D + K A GL
Sbjct: 87 GGQNCHFDDYGPYTGDISAFMLKEAGASHVIIGHSERRTVYQESDAIVRAKVQAAWRAGL 146
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQA 211
+ C+GE L+ER++ K DV +QL+ + +N++IAYEPVWA+GTG AT
Sbjct: 147 VALICVGETLEERKSNKVLDVLTRQLEGSLPDGATAENIIIAYEPVWAVGTGNTATSADV 206
Query: 212 QEVHA 216
EVHA
Sbjct: 207 AEVHA 211
>pdb|4G1K|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
pdb|4G1K|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
pdb|4G1K|C Chain C, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
pdb|4G1K|D Chain D, Crystal Structure Of Triosephosphate Isomerase From
Burkholderia Thailandensis
Length = 272
Score = 107 bits (268), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 90/149 (60%), Gaps = 4/149 (2%)
Query: 77 LNDAKLEADVDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDD 136
L A+ + R+ +Q+ + GA+TGE++ + + G + ++GHSERR GE +
Sbjct: 72 LAQAQAQLQGGRVSWGSQDVSAHEQGAYTGEVAAGMVAEFGAAYAIVGHSERRAYHGESN 131
Query: 137 QFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWD---NVVIA 193
+ + KA AL+ GL I C+GE L EREAG T V QL A A+ S D +V+A
Sbjct: 132 ETVAAKARRALAAGLTPIVCVGETLAEREAGTTEQVVGAQLDAVL-AVLSPDEAARIVVA 190
Query: 194 YEPVWAIGTGKVATPEQAQEVHAALRDWL 222
YEPVWAIGTGK AT EQAQ+VHA LR L
Sbjct: 191 YEPVWAIGTGKSATAEQAQQVHAFLRGRL 219
>pdb|3GVG|A Chain A, Crystal Structure Of Triosephosphate Isomerase From
Mycobacterium Tuberculosis
pdb|3GVG|B Chain B, Crystal Structure Of Triosephosphate Isomerase From
Mycobacterium Tuberculosis
Length = 283
Score = 107 bits (267), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 101/204 (49%), Gaps = 27/204 (13%)
Query: 54 KFFVGGNWKCNGTKESITKLV-----------------------SDLNDAKLEADVD--R 88
K + GNWK N LV +DL + D D R
Sbjct: 26 KPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLR 85
Query: 89 IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALS 148
+ AQ+ GA+TG++S L +GC +VV+GHSERR EDD + KAA AL
Sbjct: 86 LTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALK 145
Query: 149 EGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVA 206
GL I CIGE L REAG +QL+ + + +VVIAYEPVWAIGTG+VA
Sbjct: 146 HGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVA 205
Query: 207 TPEQAQEVHAALRDWLKNMSQQTL 230
+ AQEV AA+R L +++ +
Sbjct: 206 SAADAQEVCAAIRKELASLASPRI 229
>pdb|3TA6|A Chain A, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase
pdb|3TA6|B Chain B, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase
pdb|3TAO|A Chain A, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase Bound To Phosphoglycolohydroxamate
pdb|3TAO|B Chain B, Structure Of Mycobacterium Tuberculosis Triosephosphate
Isomerase Bound To Phosphoglycolohydroxamate
Length = 267
Score = 107 bits (266), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 77/204 (37%), Positives = 101/204 (49%), Gaps = 27/204 (13%)
Query: 54 KFFVGGNWKCNGTKESITKLV-----------------------SDLNDAKLEADVD--R 88
K + GNWK N LV +DL + D D R
Sbjct: 4 KPLIAGNWKMNLNHYEAIALVQKIAFSLPDKYYDRVDVAVIPPFTDLRSVQTLVDGDKLR 63
Query: 89 IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALS 148
+ AQ+ GA+TG++S L +GC +VV+GHSERR EDD + KAA AL
Sbjct: 64 LTYGAQDLSPHDSGAYTGDVSGAFLAKLGCSYVVVGHSERRTYHNEDDALVAAKAATALK 123
Query: 149 EGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WDNVVIAYEPVWAIGTGKVA 206
GL I CIGE L REAG +QL+ + + +VVIAYEPVWAIGTG+VA
Sbjct: 124 HGLTPIVCIGEHLDVREAGNHVAHNIEQLRGSLAGLLAEQIGSVVIAYEPVWAIGTGRVA 183
Query: 207 TPEQAQEVHAALRDWLKNMSQQTL 230
+ AQEV AA+R L +++ +
Sbjct: 184 SAADAQEVCAAIRKELASLASPRI 207
>pdb|2JGQ|A Chain A, Kinetics And Structural Properties Of Triosephosphate
Isomerase From Helicobacter Pylori
pdb|2JGQ|B Chain B, Kinetics And Structural Properties Of Triosephosphate
Isomerase From Helicobacter Pylori
Length = 233
Score = 94.4 bits (233), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 81/143 (56%), Gaps = 7/143 (4%)
Query: 91 IAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEG 150
+ QN++ GAFTGEI+ + L+++ +++GHSERR ++ E F+ +K + S+
Sbjct: 55 LGVQNAYPRDCGAFTGEITSKHLEELKIHTLLIGHSERRTLLKESPSFLKEKFDFFKSKN 114
Query: 151 LGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP-SWDNVVIAYEPVWAIGTGKVATPE 209
++ CIGE+L RE G F + L + I ++ N+V+AYEP+WAIGT K A+ E
Sbjct: 115 FKIVYCIGEELTTREKG--FKAVKEFLSEQLENIDLNYPNLVVAYEPIWAIGTKKSASLE 172
Query: 210 QAQEVHAALRDWLKNMSQQTLPL 232
H +LK + Q PL
Sbjct: 173 DIYLTHG----FLKQILNQKTPL 191
>pdb|3S6D|A Chain A, Crystal Structure Of A Putative Triosephosphate Isomerase
From Coccidioides Immitis
Length = 310
Score = 84.3 bits (207), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/173 (31%), Positives = 88/173 (50%), Gaps = 8/173 (4%)
Query: 61 WKCNGTKESITKLVSDLNDAKLEADVDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKW 120
+ C+ E+I + S+L + + + AQ+ + G +TGEIS L+D+
Sbjct: 87 YPCS---EAIKEFESNLAAPQDADTPPPLLLGAQDCFWDSLGPYTGEISPVCLRDMNVSI 143
Query: 121 VVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGE-----QLQEREAGKTFDVCFQ 175
V LGH+ERR + GE DQ + +KAA A +GL + CIGE + G+ C
Sbjct: 144 VELGHAERRAIFGETDQQVARKAAAAADQGLIPLVCIGEVSTLGPIVSEAIGRAVGECEA 203
Query: 176 QLKAYADAIPSWDNVVIAYEPVWAIGTGKVATPEQAQEVHAALRDWLKNMSQQ 228
Q++ +A+P V+ AYEPVWAIG + A + V + +R ++ + +
Sbjct: 204 QIRPVLEALPRDAPVIFAYEPVWAIGKPQPARVDHVGAVVSGIRSVIERIDRH 256
>pdb|2H6R|A Chain A, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|B Chain B, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|C Chain C, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|D Chain D, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|E Chain E, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|F Chain F, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|G Chain G, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
pdb|2H6R|H Chain H, Crystal Structure Of Triosephosphate Isomerase (Tim) From
Methanocaldococcus Jannaschii
Length = 219
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 53/127 (41%), Gaps = 25/127 (19%)
Query: 102 GAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALSEGLGVIACIGEQL 161
G+ TG I E +KD GCK ++ HSE+R ++ + + I K + GL I C
Sbjct: 67 GSHTGHILAEAIKDCGCKGTLINHSEKRMLLADIEAVINK----CKNLGLETIVCTNN-- 120
Query: 162 QEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEPVWAIGTG---KVATPEQAQEVHAAL 218
KA A P IA EP IGTG A PE + A+
Sbjct: 121 ------------INTSKAVAALSPDC----IAVEPPELIGTGIPVSKANPEVVEGTVRAV 164
Query: 219 RDWLKNM 225
++ K++
Sbjct: 165 KEINKDV 171
>pdb|1W0M|A Chain A, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|B Chain B, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|C Chain C, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|D Chain D, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|E Chain E, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|F Chain F, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|G Chain G, Triosephosphate Isomerase From Thermoproteus Tenax
pdb|1W0M|H Chain H, Triosephosphate Isomerase From Thermoproteus Tenax
Length = 226
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 89 IEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDDQFIGKKAAYALS 148
I + AQ + V GGA T +S+E +K+ G V+L HSE + + + + K A S
Sbjct: 57 IPVYAQGADVEAGGAHTAHVSLENIKEAGGSGVILNHSEAPLKLNDLARLVAK----AKS 112
Query: 149 EGLGVIAC 156
GL V+ C
Sbjct: 113 LGLDVVVC 120
>pdb|1HG3|A Chain A, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|B Chain B, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|C Chain C, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|D Chain D, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|E Chain E, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|F Chain F, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|G Chain G, Crystal Structure Of Tetrameric Tim From Pyrococcus
Woesei.
pdb|1HG3|H Chain H, Crystal Structure Of Tetrameric Tim From Pyrococcus Woesei
Length = 225
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 22/127 (17%)
Query: 77 LNDAKLEADVDRIEIAAQNSWVGKGGAFTGEISVEQLKDIGCKWVVLGHSERRHVIGEDD 136
L D ++ A+ I + AQ+ K G+ TG + E +K+ G +L HSE R ++ + +
Sbjct: 48 LVDLRMIAESVEIPVFAQHIDPIKPGSHTGHVLPEAVKEAGAVGTLLNHSENRMILADLE 107
Query: 137 QFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWDNVVIAYEP 196
I + E G VC A + A+ + + +A EP
Sbjct: 108 AAIRRA---------------------EEVGLMTMVCSNN-PAVSAAVAALNPDYVAVEP 145
Query: 197 VWAIGTG 203
IGTG
Sbjct: 146 PELIGTG 152
>pdb|3ABA|A Chain A, Crystal Structure Of Cyp105p1 In Complex With Filipin I
Length = 403
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Query: 102 GAFTGEISVEQLKDIGCKWVVLGHSERRHVIGED---------DQF-IGKKAAYALSEGL 151
G F GE + ++G + G HV+ D ++F I ++ A L+ G
Sbjct: 284 GQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPHLAFGF 343
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP 185
G CIG+QL E F+ F++L A P
Sbjct: 344 GAHQCIGQQLARIELQIVFETLFRRLPGLRLAKP 377
>pdb|3E5L|A Chain A, Crystal Structure Of Cyp105p1 H72a Mutant
Length = 403
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Query: 102 GAFTGEISVEQLKDIGCKWVVLGHSERRHVIGED---------DQF-IGKKAAYALSEGL 151
G F GE + ++G + G HV+ D ++F I ++ A L+ G
Sbjct: 284 GQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPHLAFGF 343
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP 185
G CIG+QL E F+ F++L A P
Sbjct: 344 GAHQCIGQQLARIELQIVFETLFRRLPGLRLAKP 377
>pdb|3E5J|A Chain A, Crystal Structure Of Cyp105p1 Wild-type Ligand-free Form
pdb|3E5K|A Chain A, Crystal Structure Of Cyp105p1 Wild-Type 4-Phenylimidazole
Complex
Length = 403
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Query: 102 GAFTGEISVEQLKDIGCKWVVLGHSERRHVIGED---------DQF-IGKKAAYALSEGL 151
G F GE + ++G + G HV+ D ++F I ++ A L+ G
Sbjct: 284 GQFGGERVATRDVELGGVRIAKGEQVVAHVLAADFDPAFVEEPERFDITRRPAPHLAFGF 343
Query: 152 GVIACIGEQLQEREAGKTFDVCFQQLKAYADAIP 185
G CIG+QL E F+ F++L A P
Sbjct: 344 GAHQCIGQQLARIELQIVFETLFRRLPGLRLAKP 377
>pdb|2Z36|A Chain A, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
pdb|2Z36|B Chain B, Crystal Structure Of Cytochrome P450 Moxa From Nonomuraea
Recticatena (Cyp105)
Length = 413
Score = 31.2 bits (69), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 139 IGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPSWD 188
+ + A + L+ G G C+G+ L E FD F+++ + A+P D
Sbjct: 339 VERGARHHLAFGFGPHQCLGQNLARMELQIVFDTLFRRIPSLRLAVPMED 388
>pdb|2Q2E|A Chain A, Crystal Structure Of The Topoisomerase Vi Holoenzyme From
Methanosarcina Mazei
Length = 369
Score = 28.5 bits (62), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 37/63 (58%), Gaps = 10/63 (15%)
Query: 66 TKESITKLVSDLNDAKLEADV--DRIEI-------AAQNSWVGKGGAFTGEISV-EQLKD 115
T++ ++ L S+L+D + E+D ++I++ A Q ++ GKG F E+ + +LK+
Sbjct: 306 TEQDVSALRSELSDPRFESDYWKEQIQLQLDIGKKAEQQAFAGKGLDFVTEVYLPNRLKE 365
Query: 116 IGC 118
+G
Sbjct: 366 MGM 368
>pdb|1PWX|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|C Chain C, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWX|D Chain D, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With Bromide
pdb|1PWZ|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With (R)-Styrene Oxide And Chloride
pdb|1PWZ|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With (R)-Styrene Oxide And Chloride
pdb|1PX0|A Chain A, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|B Chain B, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|C Chain C, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1PX0|D Chain D, Crystal Structure Of The Haloalcohol Dehalogenase Hhec
Complexed With The Haloalcohol Mimic (R)-1-Para-Nitro-
Phenyl-2-Azido-Ethanol
pdb|1ZMT|A Chain A, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZMT|B Chain B, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZMT|C Chain C, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZMT|D Chain D, Structure Of Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With
(R)-Para-Nitro Styrene Oxide, With A Water Molecule In
The Halide-Binding Site
pdb|1ZO8|A Chain A, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|B Chain B, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|C Chain C, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|D Chain D, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|E Chain E, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|F Chain F, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|G Chain G, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|H Chain H, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|I Chain I, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|J Chain J, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|K Chain K, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|L Chain L, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|M Chain M, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|N Chain N, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|O Chain O, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
pdb|1ZO8|P Chain P, X-Ray Structure Of The Haloalcohol Dehalogenase Hhec Of
Agrobacterium Radiobacter Ad1 In Complex With (S)-Para-
Nitrostyrene Oxide, With A Water Molecule In The Halide-
Binding Site
Length = 254
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 131 VIGEDDQFIGKKAAYALSEGLGVIACIGEQLQEREAGKTFDVCFQQLKAYADAIPS--WD 188
++ F G +A LSE +AC E ++++ + F + QLK ++ P+ +
Sbjct: 5 IVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIE 64
Query: 189 NVVIAYEPVWAIGTGKVATPE 209
V AY V + + + PE
Sbjct: 65 AVTSAYGQVDVLVSNDIFAPE 85
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.131 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,570,930
Number of Sequences: 62578
Number of extensions: 258046
Number of successful extensions: 1169
Number of sequences better than 100.0: 93
Number of HSP's better than 100.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 952
Number of HSP's gapped (non-prelim): 95
length of query: 241
length of database: 14,973,337
effective HSP length: 96
effective length of query: 145
effective length of database: 8,965,849
effective search space: 1300048105
effective search space used: 1300048105
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 50 (23.9 bits)