Query 026256
Match_columns 241
No_of_seqs 286 out of 1560
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 05:39:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026256.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026256hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2738 Putative methionine am 100.0 2.1E-52 4.6E-57 375.8 15.7 166 68-239 69-239 (369)
2 PLN03158 methionine aminopepti 100.0 1.4E-41 3E-46 320.6 19.4 165 68-238 90-259 (396)
3 COG0024 Map Methionine aminope 100.0 1.4E-30 3E-35 232.9 14.8 125 108-238 3-129 (255)
4 PRK12897 methionine aminopepti 100.0 5.4E-29 1.2E-33 220.3 15.7 125 108-238 2-126 (248)
5 PRK12318 methionine aminopepti 100.0 6E-28 1.3E-32 219.6 17.1 125 108-238 41-167 (291)
6 PRK07281 methionine aminopepti 100.0 5.4E-28 1.2E-32 219.6 15.3 126 107-238 1-157 (286)
7 TIGR00500 met_pdase_I methioni 100.0 1.5E-27 3.3E-32 209.8 16.4 124 109-238 2-125 (247)
8 PRK12896 methionine aminopepti 99.9 3.9E-27 8.6E-32 207.6 15.7 127 106-238 6-132 (255)
9 PRK05716 methionine aminopepti 99.9 2.2E-26 4.8E-31 202.5 15.7 126 107-238 2-127 (252)
10 COG0006 PepP Xaa-Pro aminopept 99.9 1.4E-26 3E-31 216.4 13.3 123 104-237 148-270 (384)
11 PRK09795 aminopeptidase; Provi 99.9 8.1E-26 1.8E-30 209.9 13.5 125 104-238 121-249 (361)
12 PRK10879 proline aminopeptidas 99.9 1.4E-25 3E-30 214.2 14.1 124 105-238 168-291 (438)
13 TIGR02993 ectoine_eutD ectoine 99.9 9.4E-25 2E-29 205.3 12.5 127 104-238 152-279 (391)
14 cd01086 MetAP1 Methionine Amin 99.9 9.7E-24 2.1E-28 184.3 14.8 117 116-238 1-117 (238)
15 cd01090 Creatinase Creatine am 99.9 7.9E-24 1.7E-28 185.8 14.1 117 116-238 1-118 (228)
16 PRK15173 peptidase; Provisiona 99.9 9.6E-24 2.1E-28 194.2 13.9 124 103-238 88-211 (323)
17 cd01087 Prolidase Prolidase. E 99.9 1.8E-23 4E-28 183.5 14.0 112 116-238 1-112 (243)
18 PRK14575 putative peptidase; P 99.9 2.3E-23 4.9E-28 197.0 14.4 123 104-238 172-294 (406)
19 PRK14576 putative endopeptidas 99.9 5.7E-23 1.2E-27 194.2 14.5 123 104-238 171-293 (405)
20 TIGR00495 crvDNA_42K 42K curve 99.9 1.3E-22 2.9E-27 191.4 14.9 125 108-238 11-147 (389)
21 PRK13607 proline dipeptidase; 99.9 6.2E-23 1.4E-27 196.4 12.7 122 104-238 155-277 (443)
22 cd01092 APP-like Similar to Pr 99.9 1.9E-22 4.2E-27 171.3 14.0 112 116-238 1-112 (208)
23 cd01085 APP X-Prolyl Aminopept 99.9 1E-21 2.2E-26 172.4 12.2 110 118-238 6-120 (224)
24 PF00557 Peptidase_M24: Metall 99.9 5.6E-21 1.2E-25 163.0 12.8 110 117-238 1-111 (207)
25 cd01066 APP_MetAP A family inc 99.8 1.3E-20 2.8E-25 157.5 13.0 111 116-238 1-111 (207)
26 cd01089 PA2G4-like Related to 99.8 1.5E-20 3.3E-25 164.4 13.5 117 116-238 1-129 (228)
27 PTZ00053 methionine aminopepti 99.8 5.4E-20 1.2E-24 176.8 15.8 118 106-238 148-272 (470)
28 TIGR00501 met_pdase_II methion 99.8 1.8E-19 3.9E-24 164.2 14.1 108 113-237 2-112 (295)
29 PRK08671 methionine aminopepti 99.8 5.3E-19 1.2E-23 160.7 13.3 106 115-237 1-109 (291)
30 KOG2737 Putative metallopeptid 99.8 4.1E-19 9E-24 165.1 9.7 127 102-237 177-307 (492)
31 cd01088 MetAP2 Methionine Amin 99.8 2.1E-18 4.6E-23 156.7 13.1 105 116-237 1-108 (291)
32 KOG2414 Putative Xaa-Pro amino 99.7 2.2E-18 4.7E-23 161.5 8.0 124 104-237 222-345 (488)
33 cd01091 CDC68-like Related to 99.7 6.1E-16 1.3E-20 137.5 11.5 115 116-238 1-128 (243)
34 KOG2776 Metallopeptidase [Gene 99.1 5.3E-10 1.1E-14 104.0 9.5 113 108-228 13-134 (398)
35 KOG2413 Xaa-Pro aminopeptidase 99.0 9.8E-10 2.1E-14 107.6 8.1 124 103-236 300-433 (606)
36 KOG2775 Metallopeptidase [Gene 98.7 1.3E-07 2.9E-12 86.7 11.8 115 111-236 80-201 (397)
37 KOG1189 Global transcriptional 98.1 8.3E-06 1.8E-10 82.2 7.8 124 103-237 130-265 (960)
38 cd01066 APP_MetAP A family inc 98.0 0.00011 2.3E-09 61.2 12.2 102 117-224 102-203 (207)
39 cd01092 APP-like Similar to Pr 97.8 0.00033 7.2E-09 59.3 11.7 96 117-224 103-204 (208)
40 PRK15173 peptidase; Provisiona 97.7 0.00046 1E-08 63.9 11.8 101 117-224 202-305 (323)
41 PRK05716 methionine aminopepti 97.7 0.0006 1.3E-08 60.0 11.3 104 118-224 119-239 (252)
42 PRK14575 putative peptidase; P 97.6 0.00063 1.4E-08 64.8 11.8 100 118-224 286-388 (406)
43 cd01090 Creatinase Creatine am 97.6 0.00087 1.9E-08 58.9 11.8 103 118-224 110-219 (228)
44 cd01086 MetAP1 Methionine Amin 97.6 0.00096 2.1E-08 58.2 12.0 85 118-205 109-197 (238)
45 PRK09795 aminopeptidase; Provi 97.6 0.00059 1.3E-08 63.6 11.0 104 113-224 236-341 (361)
46 PRK14576 putative endopeptidas 97.6 0.00087 1.9E-08 63.8 12.1 100 117-224 284-387 (405)
47 TIGR02993 ectoine_eutD ectoine 97.6 0.00073 1.6E-08 63.9 11.4 97 118-224 271-373 (391)
48 TIGR00500 met_pdase_I methioni 97.6 0.0012 2.5E-08 58.1 11.8 104 118-224 117-237 (247)
49 PRK08671 methionine aminopepti 97.4 0.0014 3.1E-08 59.8 10.6 96 118-224 102-205 (291)
50 cd01091 CDC68-like Related to 97.4 0.0017 3.7E-08 57.9 10.3 107 117-224 119-233 (243)
51 cd01087 Prolidase Prolidase. E 97.4 0.0024 5.2E-08 56.0 11.0 101 118-224 104-234 (243)
52 cd01088 MetAP2 Methionine Amin 97.3 0.0015 3.3E-08 59.5 9.7 96 118-224 101-204 (291)
53 PRK12318 methionine aminopepti 97.3 0.0028 6E-08 58.0 11.3 86 118-206 159-247 (291)
54 PRK12897 methionine aminopepti 97.3 0.0028 6E-08 56.1 10.8 104 118-224 118-238 (248)
55 PF00557 Peptidase_M24: Metall 97.3 0.0018 4E-08 54.9 9.2 98 119-224 104-206 (207)
56 PRK12896 methionine aminopepti 97.2 0.0037 8.1E-08 55.0 11.0 104 118-224 124-245 (255)
57 cd01089 PA2G4-like Related to 97.2 0.0044 9.6E-08 54.2 10.5 98 117-224 120-219 (228)
58 TIGR00501 met_pdase_II methion 97.1 0.0029 6.2E-08 58.0 9.5 94 119-223 106-207 (295)
59 PRK07281 methionine aminopepti 97.1 0.0044 9.4E-08 56.7 10.5 85 118-205 149-237 (286)
60 COG0006 PepP Xaa-Pro aminopept 97.1 0.0049 1.1E-07 57.9 11.2 110 104-224 251-366 (384)
61 PLN03158 methionine aminopepti 97.0 0.0084 1.8E-07 57.4 11.1 85 118-205 251-339 (396)
62 PTZ00053 methionine aminopepti 96.7 0.015 3.3E-07 56.9 10.9 102 118-223 264-375 (470)
63 TIGR00495 crvDNA_42K 42K curve 96.6 0.017 3.6E-07 55.2 10.4 100 118-222 139-247 (389)
64 COG5406 Nucleosome binding fac 96.6 0.0034 7.3E-08 63.0 5.7 126 103-236 163-305 (1001)
65 PRK10879 proline aminopeptidas 96.6 0.029 6.2E-07 54.2 11.9 106 118-224 283-410 (438)
66 COG0024 Map Methionine aminope 96.3 0.052 1.1E-06 49.2 11.1 89 117-206 120-210 (255)
67 cd01085 APP X-Prolyl Aminopept 95.5 0.3 6.5E-06 42.9 12.1 98 119-224 113-215 (224)
68 PRK13607 proline dipeptidase; 95.4 0.11 2.4E-06 50.4 9.6 88 119-206 270-390 (443)
69 KOG2738 Putative methionine am 92.9 0.61 1.3E-05 43.5 8.6 84 117-203 229-316 (369)
70 KOG1189 Global transcriptional 87.1 2.4 5.2E-05 44.0 7.8 106 118-227 258-370 (960)
71 COG5406 Nucleosome binding fac 74.3 11 0.00024 38.8 7.2 79 120-202 301-384 (1001)
72 cd01666 TGS_DRG_C TGS_DRG_C: 72.2 15 0.00032 27.1 5.9 52 137-199 21-73 (75)
73 KOG2414 Putative Xaa-Pro amino 57.1 67 0.0015 31.6 8.6 92 111-206 335-439 (488)
74 cd04938 TGS_Obg-like TGS_Obg-l 55.8 22 0.00047 26.2 4.0 47 137-199 28-74 (76)
75 PF03477 ATP-cone: ATP cone do 54.3 9.1 0.0002 28.2 1.8 36 124-159 39-74 (90)
76 PF05184 SapB_1: Saposin-like 50.5 31 0.00068 21.3 3.7 34 122-155 3-36 (39)
77 PRK01490 tig trigger factor; P 50.4 58 0.0012 31.1 7.1 56 140-224 131-190 (435)
78 TIGR00115 tig trigger factor. 44.2 81 0.0018 29.8 7.0 57 140-224 119-179 (408)
79 KOG2413 Xaa-Pro aminopeptidase 38.7 88 0.0019 31.9 6.5 81 118-206 427-518 (606)
80 KOG2776 Metallopeptidase [Gene 37.0 1.7E+02 0.0038 28.2 7.8 86 120-207 143-237 (398)
81 PRK00464 nrdR transcriptional 36.4 95 0.0021 26.1 5.5 40 122-161 84-123 (154)
82 KOG2737 Putative metallopeptid 34.7 1E+02 0.0022 30.1 5.9 32 125-156 307-338 (492)
83 cd01669 TGS_Ygr210_C TGS_Ygr21 31.1 1.4E+02 0.003 21.9 5.1 48 137-199 27-74 (76)
84 PF10415 FumaraseC_C: Fumarase 31.1 64 0.0014 22.3 3.0 34 118-151 10-48 (55)
85 PF00249 Myb_DNA-binding: Myb- 29.7 97 0.0021 20.1 3.6 43 110-152 3-46 (48)
86 PF04363 DUF496: Protein of un 29.6 1.6E+02 0.0035 22.8 5.2 37 117-154 26-62 (95)
87 COG1163 DRG Predicted GTPase [ 26.4 1.6E+02 0.0035 28.2 5.7 48 139-199 312-362 (365)
88 TIGR03147 cyt_nit_nrfF cytochr 26.3 88 0.0019 25.6 3.5 29 123-151 56-84 (126)
89 PF04355 SmpA_OmlA: SmpA / Oml 26.2 47 0.001 23.4 1.7 19 132-150 7-25 (71)
90 PRK05423 hypothetical protein; 24.8 1E+02 0.0022 24.2 3.4 28 129-156 44-71 (104)
91 COG0544 Tig FKBP-type peptidyl 24.8 1.7E+02 0.0036 28.7 5.7 42 141-206 132-173 (441)
92 PF00254 FKBP_C: FKBP-type pep 24.4 1.7E+02 0.0038 21.1 4.6 41 188-233 2-50 (94)
93 PF00725 3HCDH: 3-hydroxyacyl- 23.9 1.6E+02 0.0036 21.5 4.5 30 123-152 5-35 (97)
94 PRK10144 formate-dependent nit 21.8 1.2E+02 0.0026 24.8 3.5 29 123-151 56-84 (126)
95 PRK07440 hypothetical protein; 21.1 2.4E+02 0.0053 20.1 4.7 29 171-199 34-63 (70)
96 TIGR01765 tspaseT_teng_N trans 21.1 3.2E+02 0.0069 19.5 5.6 46 111-156 8-53 (73)
97 PF09506 Salt_tol_Pase: Glucos 20.2 3.7E+02 0.008 25.9 6.8 51 112-162 98-148 (381)
No 1
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.1e-52 Score=375.79 Aligned_cols=166 Identities=61% Similarity=0.940 Sum_probs=157.2
Q ss_pred CCCCccCCCCccCCCCCCCCCCCCCCCCccCCCC----CCCcC-CCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCc
Q 026256 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKP----IGIVS-GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (241)
Q Consensus 68 ~~~~~~~l~~g~~s~~~~vp~~i~~p~y~~~~~~----~~~~~-~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvT 142 (241)
.+.|+++||||++||+|+||+||+||+|+.+|.+ ++... ...|++++||++||+||+|+++++++|..+++||+|
T Consensus 69 ~~~~~g~Lr~~pvsprr~VP~hI~rPdya~~g~s~se~~~~~s~~i~i~~~e~ie~mR~ac~LarevLd~Aa~~v~PgvT 148 (369)
T KOG2738|consen 69 KFRFTGPLRPGPVSPRRPVPDHIPRPDYADSGVSLSEQPEISSNEIKILDPEGIEGMRKACRLAREVLDYAATLVRPGVT 148 (369)
T ss_pred cccccCCccccCCCCCCcCCccCCCCchhhcCCcccccccccccceeccCHHHHHHHHHHHHHHHHHHHHHhhhcCCCcc
Confidence 4899999999999999999999999999998652 23333 567999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeee
Q 026256 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPL 222 (241)
Q Consensus 143 e~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~ 222 (241)
|+|||+++|++++++|+|||||||.+||++||+|+|+++|||+||.|+||+|||||||+++|++ |||+|+++||+
T Consensus 149 TdEiD~~VH~a~Ierg~YPSPLnYy~FPKS~CTSVNEviCHGIPD~RpLedGDIvNiDVtvY~~-----GyHGDlneTff 223 (369)
T KOG2738|consen 149 TDEIDRAVHNAIIERGAYPSPLNYYGFPKSVCTSVNEVICHGIPDSRPLEDGDIVNIDVTVYLN-----GYHGDLNETFF 223 (369)
T ss_pred HHHHHHHHHHHHHhcCCcCCCcccCCCchhhhcchhheeecCCCCcCcCCCCCEEeEEEEEEec-----cccCccccceE
Confidence 9999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred cCCCCCHHHHHHhhccc
Q 026256 223 PPCNVLHLALSLLRVDF 239 (241)
Q Consensus 223 vG~e~s~e~~rL~ev~~ 239 (241)
|| +++++.++|+++.+
T Consensus 224 vG-~Vde~~k~LVkvT~ 239 (369)
T KOG2738|consen 224 VG-NVDEKAKKLVKVTR 239 (369)
T ss_pred ee-ccCHHHHHHHHHHH
Confidence 99 89999999999864
No 2
>PLN03158 methionine aminopeptidase; Provisional
Probab=100.00 E-value=1.4e-41 Score=320.60 Aligned_cols=165 Identities=46% Similarity=0.751 Sum_probs=157.3
Q ss_pred CCCCccCCCCccCCCCCCCCCCCCCCCCccCCCCC-----CCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCc
Q 026256 68 PNRRRKRLRPGKVSPHRPVPDHIPRPPYVNSQKPI-----GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGIT 142 (241)
Q Consensus 68 ~~~~~~~l~~g~~s~~~~vp~~i~~p~y~~~~~~~-----~~~~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvT 142 (241)
.|+|+++||||++||++.||+||++|+|+.++.+. .+...|.|||++||+.||+||++++++++++.++++||+|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~p~~i~~p~y~~~~~~~~~~~~~~~~~~~IKsp~EIe~mR~A~~ia~~al~~a~~~irpGvT 169 (396)
T PLN03158 90 DFDWTGPLRPYPISPRRVVPDHIPKPDWALDGTPKIEPNSDLQHSVEIKTPEQIQRMRETCRIAREVLDAAARAIKPGVT 169 (396)
T ss_pred CCCCCcccccCCCCCCCCCCccCCCCccccCCCCccccccccccceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 48899999999999999999999999999886543 3456799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeee
Q 026256 143 TDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPL 222 (241)
Q Consensus 143 e~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~ 222 (241)
|+||+++++++++++|++|+++||.+||+++|+|+|+++|||+|++++|++||+|+||++++++ ||++|++|||+
T Consensus 170 e~EI~~~v~~~~~~~Ga~ps~l~y~~fp~svcts~N~~i~Hgip~~r~L~~GDiV~iDvg~~~~-----GY~aD~tRT~~ 244 (396)
T PLN03158 170 TDEIDRVVHEATIAAGGYPSPLNYHFFPKSCCTSVNEVICHGIPDARKLEDGDIVNVDVTVYYK-----GCHGDLNETFF 244 (396)
T ss_pred HHHHHHHHHHHHHHcCCccccccccCCCceeeecccccccCCCCCCccCCCCCEEEEEEeEEEC-----CEEEeEEeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred cCCCCCHHHHHHhhcc
Q 026256 223 PPCNVLHLALSLLRVD 238 (241)
Q Consensus 223 vG~e~s~e~~rL~ev~ 238 (241)
+| ++++++++|+++.
T Consensus 245 VG-~~~~e~~~l~e~~ 259 (396)
T PLN03158 245 VG-NVDEASRQLVKCT 259 (396)
T ss_pred cC-CCCHHHHHHHHHH
Confidence 99 9999999999875
No 3
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=99.97 E-value=1.4e-30 Score=232.86 Aligned_cols=125 Identities=39% Similarity=0.672 Sum_probs=118.2
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCC
Q 026256 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 187 (241)
Q Consensus 108 R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~ 187 (241)
..+||++||+.||+||+|++++++++.+.++||+|+.||+.++++++.++|++|+++||.+||..+|+|+|+++|||+|+
T Consensus 3 i~ikt~~eiek~r~Ag~i~a~~l~~~~~~v~pGvtt~Eld~~~~~~i~~~ga~pa~~gy~g~~~~~ciSvNe~v~HgiP~ 82 (255)
T COG0024 3 ISIKTPEEIEKMREAGKIAAKALKEVASLVKPGVTTLELDEIAEEFIREKGAYPAFLGYKGFPFPTCISVNEVVAHGIPG 82 (255)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCceehhccCcCCCcceEeehhheeeecCCC
Confidence 34899999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred -CCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCH-HHHHHhhcc
Q 026256 188 -SRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLH-LALSLLRVD 238 (241)
Q Consensus 188 -~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~-e~~rL~ev~ 238 (241)
+++|++||+|+||+|+.++ ||++|+++||.|| +.++ ..++|.++.
T Consensus 83 d~~vlk~GDiv~IDvg~~~d-----G~~~Dsa~T~~vg-~~~~~~~~~L~~~t 129 (255)
T COG0024 83 DKKVLKEGDIVKIDVGAHID-----GYIGDTAITFVVG-EVSDEDAKRLLEAT 129 (255)
T ss_pred CCcccCCCCEEEEEEEEEEC-----CeeeeEEEEEECC-CCChHHHHHHHHHH
Confidence 6789999999999999999 9999999999999 6664 666788875
No 4
>PRK12897 methionine aminopeptidase; Reviewed
Probab=99.96 E-value=5.4e-29 Score=220.25 Aligned_cols=125 Identities=34% Similarity=0.526 Sum_probs=119.3
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCC
Q 026256 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD 187 (241)
Q Consensus 108 R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~ 187 (241)
..|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.....+|.+|+.++|+|+|++.||+.|+
T Consensus 2 ~~iKs~~EI~~~r~A~~i~~~~~~~~~~~~~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~i~~g~n~~~~H~~p~ 81 (248)
T PRK12897 2 ITIKTKNEIDLMHESGKLLASCHREIAKIMKPGITTKEINTFVEAYLEKHGATSEQKGYNGYPYAICASVNDEMCHAFPA 81 (248)
T ss_pred ceeCCHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcHHHHHHHHHHHHHHcCCcccccccCCCCcceEeccCCEeecCCCC
Confidence 57999999999999999999999999999999999999999999999999998766667889999999999999999999
Q ss_pred CCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 188 SRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 188 ~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
+++|++||+|.+|+++.++ ||++|++|||++| +++++++++|++.
T Consensus 82 ~~~l~~Gd~V~iD~g~~~~-----GY~sD~tRT~~vG-~~s~~~~~~~~~~ 126 (248)
T PRK12897 82 DVPLTEGDIVTIDMVVNLN-----GGLSDSAWTYRVG-KVSDEAEKLLLVA 126 (248)
T ss_pred CcccCCCCEEEEEeeEEEC-----CEEEEEEEEEEcC-CCCHHHHHHHHHH
Confidence 9999999999999999999 9999999999999 9999999999864
No 5
>PRK12318 methionine aminopeptidase; Provisional
Probab=99.96 E-value=6e-28 Score=219.56 Aligned_cols=125 Identities=33% Similarity=0.648 Sum_probs=118.5
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCC--CCCceeeecCCCcccccC
Q 026256 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYG--GFPKSVCTSVNECICHGI 185 (241)
Q Consensus 108 R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~--~Fp~~V~tg~N~~i~Hg~ 185 (241)
+.|||++||++||+|++|++++++++.+.++||+||.||++++++.+.++|+.+++++|. +|+.++|+|.|+.++|+.
T Consensus 41 i~IKs~~EIe~~R~Aa~I~~~a~~a~~~~irpG~tE~Eiaa~~~~~~~~~G~~~~~~~~~~~~f~~~v~~g~n~~~~H~~ 120 (291)
T PRK12318 41 IIIKTPEQIEKIRKACQVTARILDALCEAAKEGVTTNELDELSRELHKEYNAIPAPLNYGSPPFPKTICTSLNEVICHGI 120 (291)
T ss_pred eEECCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCccccccCCCCCCcceEeeccceeecCC
Confidence 359999999999999999999999999999999999999999999999999988877775 599999999999999999
Q ss_pred CCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 186 PDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 186 P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
|++++|++||+|.+|+++.++ ||++|++|||++| ++++++++++++.
T Consensus 121 p~~~~l~~GD~V~vD~g~~~~-----GY~aDitRT~~vG-~~~~~~~~~~~~~ 167 (291)
T PRK12318 121 PNDIPLKNGDIMNIDVSCIVD-----GYYGDCSRMVMIG-EVSEIKKKVCQAS 167 (291)
T ss_pred CCCCccCCCCEEEEEEeEEEC-----cEEEEEEEEEECC-CCCHHHHHHHHHH
Confidence 999999999999999999999 9999999999999 9999999999864
No 6
>PRK07281 methionine aminopeptidase; Reviewed
Probab=99.95 E-value=5.4e-28 Score=219.63 Aligned_cols=126 Identities=21% Similarity=0.329 Sum_probs=118.6
Q ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCC----CCCCceeeecCCCccc
Q 026256 107 GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY----GGFPKSVCTSVNECIC 182 (241)
Q Consensus 107 ~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY----~~Fp~~V~tg~N~~i~ 182 (241)
|..|||++||++||+|++|++++++++.+.++||+||.||++.++..+.++|+.++.+|+ .+||+++|+|.|++++
T Consensus 1 m~~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~pG~te~ei~~~~~~~~~~~g~~~~~~G~~~~~~~f~~~v~~G~n~~~~ 80 (286)
T PRK07281 1 MITLKSAREIEAMDRAGDFLASIHIGLRDLIKPGVDMWEVEEYVRRRCKEENVLPLQIGVDGAMMDYPYATCCGLNDEVA 80 (286)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCcccccCCCCcccCCCcceEEecccccc
Confidence 457999999999999999999999999999999999999999999999999998877765 4699999999999999
Q ss_pred ccCCCCCccCCCCeEEEEeeE---------------------------EEcCcCCCcEEEceEeeeecCCCCCHHHHHHh
Q 026256 183 HGIPDSRALEDGDTINIDVTV---------------------------YLNQMIEPGFWGASGSLPLPPCNVLHLALSLL 235 (241)
Q Consensus 183 Hg~P~~r~Lq~GDiV~IDvg~---------------------------~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ 235 (241)
|+.|++++|++||+|+||+++ .++ ||++|++|||++| ++++++++++
T Consensus 81 H~~p~~~~l~~Gd~v~iD~g~~~~~~~y~~d~~~~~~~~~~~~~~~~~~~~-----gy~~D~~rT~~vG-~~~~~~~~l~ 154 (286)
T PRK07281 81 HAFPRHYILKEGDLLKVDMVLSEPLDKSIVDVSKLNFDNVEQMKKYTESYR-----GGLADSCWAYAVG-TPSDEVKNLM 154 (286)
T ss_pred CCCCCCcCcCCCCEEEEEecccccccccccccccccccccccccccccccC-----CEEeeeEEEEECC-CCCHHHHHHH
Confidence 999999999999999999997 478 9999999999999 9999999999
Q ss_pred hcc
Q 026256 236 RVD 238 (241)
Q Consensus 236 ev~ 238 (241)
++.
T Consensus 155 ~~~ 157 (286)
T PRK07281 155 DVT 157 (286)
T ss_pred HHH
Confidence 875
No 7
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=99.95 E-value=1.5e-27 Score=209.81 Aligned_cols=124 Identities=44% Similarity=0.700 Sum_probs=118.7
Q ss_pred CcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCC
Q 026256 109 EVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDS 188 (241)
Q Consensus 109 ~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~ 188 (241)
.|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.+.+.+|.+|+.++++|.|+.++|+.|++
T Consensus 2 ~iKs~~Ei~~~r~A~~i~~~~~~~~~~~i~~G~tE~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~H~~~~~ 81 (247)
T TIGR00500 2 SLKSPDEIEKIRKAGRLAAEVLEELEREVKPGVSTKELDRIAKDFIEKHGAKPAFLGYYGFPGSVCISVNEVVIHGIPDK 81 (247)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHCCCCccccCCCCCCceeEeccccEEEecCCCC
Confidence 69999999999999999999999999999999999999999999999999988777777899999999999999999999
Q ss_pred CccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 189 RALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 189 r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
++|++||+|.+|+++.|+ ||++|++|||++| +++++++++|++.
T Consensus 82 ~~l~~Gd~v~iD~g~~~~-----gY~aD~~RT~~vG-~~~~~~~~~~~~~ 125 (247)
T TIGR00500 82 KVLKDGDIVNIDVGVIYD-----GYHGDTAKTFLVG-KISPEAEKLLECT 125 (247)
T ss_pred cccCCCCEEEEEEEEEEC-----CEEEEEEEEEEcC-CCCHHHHHHHHHH
Confidence 999999999999999999 9999999999999 8999999998763
No 8
>PRK12896 methionine aminopeptidase; Reviewed
Probab=99.95 E-value=3.9e-27 Score=207.60 Aligned_cols=127 Identities=43% Similarity=0.722 Sum_probs=120.1
Q ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccC
Q 026256 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI 185 (241)
Q Consensus 106 ~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~ 185 (241)
+.+.|||++||++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.+++.+|.+||.++|+|.|+..+|+.
T Consensus 6 ~~~~vKs~~Ei~~~r~a~~i~~~~~~~~~~~i~pG~te~el~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~n~~~~h~~ 85 (255)
T PRK12896 6 RGMEIKSPRELEKMRKIGRIVATALKEMGKAVEPGMTTKELDRIAEKRLEEHGAIPSPEGYYGFPGSTCISVNEEVAHGI 85 (255)
T ss_pred CceeECCHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHCCCEeCcccCCCCCcceEecCCCeeEecC
Confidence 34579999999999999999999999999999999999999999999999999998877788899999999999999999
Q ss_pred CCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 186 PDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 186 P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
|++++|++||+|.+|+++.++ ||++|++|||++| ++++++++++++.
T Consensus 86 p~~~~l~~Gd~v~iD~g~~~~-----gY~aD~~RT~~vG-~~~~~~~~~~~~~ 132 (255)
T PRK12896 86 PGPRVIKDGDLVNIDVSAYLD-----GYHGDTGITFAVG-PVSEEAEKLCRVA 132 (255)
T ss_pred CCCccCCCCCEEEEEEeEEEC-----cEEEeeEEEEECC-CCCHHHHHHHHHH
Confidence 999999999999999999999 9999999999999 8999999998753
No 9
>PRK05716 methionine aminopeptidase; Validated
Probab=99.94 E-value=2.2e-26 Score=202.48 Aligned_cols=126 Identities=46% Similarity=0.763 Sum_probs=119.2
Q ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCC
Q 026256 107 GPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP 186 (241)
Q Consensus 107 ~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P 186 (241)
+..|||++||+.||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+.+.+|.+|+.++++|.|+..+|+.|
T Consensus 2 ~~~iKs~~Ei~~~r~A~~i~~~~~~~a~~~i~pG~se~ela~~~~~~~~~~G~~~~~~~~~~~~~~~~~g~~~~~~h~~~ 81 (252)
T PRK05716 2 AITIKTPEEIEKMRVAGRLAAEVLDEIEPHVKPGVTTKELDRIAEEYIRDQGAIPAPLGYHGFPKSICTSVNEVVCHGIP 81 (252)
T ss_pred ceeeCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHCCCEecccCCCCCCcCeEecccceeecCCC
Confidence 35799999999999999999999999999999999999999999999999999877667778999999999999999999
Q ss_pred CCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 187 DSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 187 ~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
++++|++||+|.+|+++.++ ||++|++|||++| ++++++++++++.
T Consensus 82 ~~~~l~~Gd~v~id~g~~~~-----gY~~d~~RT~~vG-~~~~~~~~~~~~~ 127 (252)
T PRK05716 82 SDKVLKEGDIVNIDVTVIKD-----GYHGDTSRTFGVG-EISPEDKRLCEVT 127 (252)
T ss_pred CCcccCCCCEEEEEEEEEEC-----CEEEEeEEEEECC-CCCHHHHHHHHHH
Confidence 99999999999999999999 9999999999999 9999999999864
No 10
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.94 E-value=1.4e-26 Score=216.39 Aligned_cols=123 Identities=22% Similarity=0.253 Sum_probs=117.6
Q ss_pred CcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 026256 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (241)
Q Consensus 104 ~~~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~H 183 (241)
+..+|+|||++||+.||+|+++++.++..+.+.++||+||.||.+.++..+.++|++. ..|+++|++|.|+++||
T Consensus 148 i~~lR~iKs~~EI~~ir~A~~i~~~a~~~~~~~~~~g~tE~ev~a~l~~~~~~~G~~~-----~sf~~iv~~G~n~a~pH 222 (384)
T COG0006 148 VDRLRLIKSPAEIAKIRKAAEIADAALEAALEAIRPGMTEAEIAAELEYALRKGGAEG-----PSFDTIVASGENAALPH 222 (384)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCCc-----cCcCcEEeccccccCcC
Confidence 4678999999999999999999999999999999999999999999999999999764 25899999999999999
Q ss_pred cCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhc
Q 026256 184 GIPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRV 237 (241)
Q Consensus 184 g~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev 237 (241)
+.|+++.+++||+|+||+|+.|+ ||++|+||||++| +++++++++|++
T Consensus 223 ~~~~~~~~~~gd~vliD~G~~~~-----gY~sDiTRT~~~G-~~~~~~~~iy~~ 270 (384)
T COG0006 223 YTPSDRKLRDGDLVLIDLGGVYN-----GYCSDITRTFPIG-KPSDEQREIYEA 270 (384)
T ss_pred CCCCcccccCCCEEEEEeeeEEC-----CccccceeEEecC-CCCHHHHHHHHH
Confidence 99999999999999999999999 9999999999999 999999999985
No 11
>PRK09795 aminopeptidase; Provisional
Probab=99.93 E-value=8.1e-26 Score=209.86 Aligned_cols=125 Identities=14% Similarity=0.235 Sum_probs=113.9
Q ss_pred CcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 026256 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (241)
Q Consensus 104 ~~~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~H 183 (241)
+..+|+|||++||++||+|++|++++++++.+.++||+||.||++.++..+.++|+.+ .+|+++|++|.|++.||
T Consensus 121 ~~~lR~iKs~~Ei~~~r~a~~i~~~~~~~~~~~i~~G~tE~e~~~~~~~~~~~~G~~~-----~~f~~iv~sG~~~~~ph 195 (361)
T PRK09795 121 PDVLRQIKTPEEVEKIRLACGIADRGAEHIRRFIQAGMSEREIAAELEWFMRQQGAEK-----ASFDTIVASGWRGALPH 195 (361)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHCCCCc-----CCCCeEEEEeccccccC
Confidence 5678999999999999999999999999999999999999999999999999999986 35899999999999999
Q ss_pred cCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCC-CCHH---HHHHhhcc
Q 026256 184 GIPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCN-VLHL---ALSLLRVD 238 (241)
Q Consensus 184 g~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e-~s~e---~~rL~ev~ 238 (241)
+.|++++|++||+|.+|+++.|+ ||++|++|||++|++ ++++ ++++|++.
T Consensus 196 ~~~~~~~l~~gd~v~~d~g~~~~-----gY~sd~tRt~~~g~~~~~~~~~~~~~~~~~v 249 (361)
T PRK09795 196 GKASDKIVAAGEFVTLDFGALYQ-----GYCSDMTRTLLVNGEGVSAESHPLFNVYQIV 249 (361)
T ss_pred CCCCCceecCCCEEEEEeccccC-----CEeecceEEEEeCCcCCchhHHHHHHHHHHH
Confidence 99999999999999999999999 999999999999743 2333 57777653
No 12
>PRK10879 proline aminopeptidase P II; Provisional
Probab=99.93 E-value=1.4e-25 Score=214.22 Aligned_cols=124 Identities=18% Similarity=0.225 Sum_probs=116.0
Q ss_pred cCCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccc
Q 026256 105 VSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG 184 (241)
Q Consensus 105 ~~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg 184 (241)
.++|+|||++||+.||+|++++++++.++.+.++||+||.||++.+...+.++|+.. ..|+++|++|.|++++|+
T Consensus 168 ~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~~~pG~tE~ei~a~~~~~~~~~G~~~-----~~~~~iv~~G~na~~~H~ 242 (438)
T PRK10879 168 HEMRLFKSPEEIAVLRRAGEISALAHTRAMEKCRPGMFEYQLEGEIHHEFNRHGARY-----PSYNTIVGSGENGCILHY 242 (438)
T ss_pred HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHCCCCC-----CCCCcEEEEcCccccccC
Confidence 357999999999999999999999999999999999999999999999999999864 248899999999999999
Q ss_pred CCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 185 IPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 185 ~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
.|++++|++||+|++|+|+.++ ||++|+||||+++|+++++++++|++.
T Consensus 243 ~~~~~~l~~GDlVliD~G~~~~-----GY~sDitRT~~v~G~~s~~q~~~y~~v 291 (438)
T PRK10879 243 TENESEMRDGDLVLIDAGCEYK-----GYAGDITRTFPVNGKFTPAQREIYDIV 291 (438)
T ss_pred CCCccccCCCCEEEEEeCeEEC-----CEEEEeEEEEEECCcCCHHHHHHHHHH
Confidence 9999999999999999999999 999999999999449999999999863
No 13
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=99.92 E-value=9.4e-25 Score=205.26 Aligned_cols=127 Identities=12% Similarity=0.134 Sum_probs=110.5
Q ss_pred CcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHc-CCCCCCCCCCCCCceeeecCCCccc
Q 026256 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN-GAYPSPLGYGGFPKSVCTSVNECIC 182 (241)
Q Consensus 104 ~~~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~-Ga~psplgY~~Fp~~V~tg~N~~i~ 182 (241)
+.++|+|||++||++||+|++|++++++++.+.++||+||.||.+.+.+..... ....+ .|..|.+++.+|.|++.+
T Consensus 152 ~~~lR~iKs~~EI~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~~~~~g~--~~~~~~~iv~sG~~~a~p 229 (391)
T TIGR02993 152 VNWQRAVKSETEISYMRVAARIVEKMHQRIFERIEPGMRKCDLVADIYDAGIRGVDGFGG--DYPAIVPLLPSGADASAP 229 (391)
T ss_pred HHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhhhhcccCcCC--CcCCcccccccCccccCC
Confidence 567899999999999999999999999999999999999999999886554321 11111 123466778899999999
Q ss_pred ccCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 183 HGIPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 183 Hg~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
|+.|++++|++||+|++|+++.|+ ||++|++|||++| +++++++++|++.
T Consensus 230 H~~~~~~~l~~gd~v~iD~g~~~~-----GY~sD~tRT~~vG-~p~~~~~~~~~~~ 279 (391)
T TIGR02993 230 HLTWDDSPMKVGEGTFFEIAGCYK-----RYHCPLSRTVFLG-KPTQAFLDAEKAV 279 (391)
T ss_pred CCCCCCCcccCCCEEEEEeeeecc-----cCccceeEEEEcC-CCCHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999 9999999998863
No 14
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.91 E-value=9.7e-24 Score=184.29 Aligned_cols=117 Identities=52% Similarity=0.898 Sum_probs=111.9
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCC
Q 026256 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (241)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~GD 195 (241)
|+.||+|+++++++++++.+.++||+||.||++.+.+.+.++|+.+.+.+|.+|+..+++|.|++.+|+.|++++|++||
T Consensus 1 I~~lr~A~~i~~~~~~~~~~~~~pG~tE~ev~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~Gd 80 (238)
T cd01086 1 IEGMREAGRIVAEVLDELAKAIKPGVTTKELDQIAHEFIEEHGAYPAPLGYYGFPKSICTSVNEVVCHGIPDDRVLKDGD 80 (238)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCcccccCCCCCcceecCCCCceeCCCCCCcccCCCC
Confidence 68999999999999999999999999999999999999999999988778888999999999999999999999999999
Q ss_pred eEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 196 TINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 196 iV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
+|.+|+++.++ ||++|++|||++| ++++++++++++.
T Consensus 81 ~v~id~g~~~~-----GY~ad~~RT~~~G-~~~~~~~~~~~~~ 117 (238)
T cd01086 81 IVNIDVGVELD-----GYHGDSARTFIVG-EVSEEAKKLVEVT 117 (238)
T ss_pred EEEEEEEEEEC-----CEEEEEEEEEECC-CCCHHHHHHHHHH
Confidence 99999999999 9999999999999 8999999999864
No 15
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=99.91 E-value=7.9e-24 Score=185.79 Aligned_cols=117 Identities=16% Similarity=0.171 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCC-CCCCCCCceeeecCCCcccccCCCCCccCCC
Q 026256 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSP-LGYGGFPKSVCTSVNECICHGIPDSRALEDG 194 (241)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psp-lgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~G 194 (241)
|++||+|++|++++++++.+.++||+||.||++.+++.+.++|+...+ ..|.++.+++++|.|++.+|+.|++++|++|
T Consensus 1 I~~ir~Aa~i~d~~~~~~~~~i~pG~tE~ei~a~~~~~~~~~ga~~~~~~~~~~~~~~v~~G~~~~~~H~~~~~r~l~~G 80 (228)
T cd01090 1 IALIRHGARIADIGGAAVVEAIREGVPEYEVALAGTQAMVREIAKTFPEVELMDTWTWFQSGINTDGAHNPVTNRKVQRG 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccCCcccccCcceEEEeeccccccCCCCCCcccCCC
Confidence 689999999999999999999999999999999999999999875322 2233344678999999999999999999999
Q ss_pred CeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 195 DTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 195 DiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
|+|++|+++.++ ||++|++|||++| ++++++++++++.
T Consensus 81 D~v~~d~g~~~~-----GY~ad~~RT~~vG-~~~~~~~~~~~~~ 118 (228)
T cd01090 81 DILSLNCFPMIA-----GYYTALERTLFLD-EVSDAHLKIWEAN 118 (228)
T ss_pred CEEEEEEeEEEC-----CEeeeeEEEEECC-CCCHHHHHHHHHH
Confidence 999999999999 9999999999999 9999999999875
No 16
>PRK15173 peptidase; Provisional
Probab=99.91 E-value=9.6e-24 Score=194.24 Aligned_cols=124 Identities=15% Similarity=0.180 Sum_probs=110.5
Q ss_pred CCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccc
Q 026256 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECIC 182 (241)
Q Consensus 103 ~~~~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~ 182 (241)
.+.++|.|||++||+.||+|++++++++.++.+.++||+||.||++.++..+.+.|... |..| .++.+|.| ..+
T Consensus 88 ~i~~lR~iKs~~EI~~mr~A~~i~~~~~~~~~~~i~~G~tE~el~a~~~~~~~~~g~~~----~~~~-~~i~~G~~-~~~ 161 (323)
T PRK15173 88 IFNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETH----FSRF-HLISVGAD-FSP 161 (323)
T ss_pred HHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHcCCCC----CCCC-cEEEECCC-Ccc
Confidence 35688999999999999999999999999999999999999999999998888876543 2223 46667776 578
Q ss_pred ccCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 183 HGIPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 183 Hg~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
|+.|+++++++||+|++|+++.|+ ||++|++|||++| +++++++++|++.
T Consensus 162 h~~~~~~~l~~Gd~V~iD~g~~~~-----GY~aDitRT~~vG-~p~~~~~~~y~~v 211 (323)
T PRK15173 162 KLIPSNTKACSGDLIKFDCGVDVD-----GYGADIARTFVVG-EPPEITRKIYQTI 211 (323)
T ss_pred CCCCCCCccCCCCEEEEEeCccCC-----CEeeeeEEEEEcC-CCCHHHHHHHHHH
Confidence 999999999999999999999999 9999999999999 9999999999864
No 17
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=99.90 E-value=1.8e-23 Score=183.48 Aligned_cols=112 Identities=21% Similarity=0.233 Sum_probs=105.6
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCC
Q 026256 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (241)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~GD 195 (241)
|++||+|+++++++++++.+.++||+||.||++.+++.+.++|+++ .|+.++++|.|+..+|+.|++++|++||
T Consensus 1 i~~lr~A~~i~~~~~~~~~~~i~pG~tE~ei~~~~~~~~~~~G~~~------~~~~~v~~g~~~~~~H~~~~~~~l~~Gd 74 (243)
T cd01087 1 IELMRKACDISAEAHRAAMKASRPGMSEYELEAEFEYEFRSRGARL------AYSYIVAAGSNAAILHYVHNDQPLKDGD 74 (243)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHHcCCCc------CCCCeEEECCCccccCCCcCCCcCCCCC
Confidence 6899999999999999999999999999999999999999999883 3788999999999999999999999999
Q ss_pred eEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 196 TINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 196 iV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
+|++|+++.++ ||++|++|||++|++++++++++|++.
T Consensus 75 ~v~vD~g~~~~-----GY~ad~~Rt~~vgg~~~~~~~~~~~~~ 112 (243)
T cd01087 75 LVLIDAGAEYG-----GYASDITRTFPVNGKFTDEQRELYEAV 112 (243)
T ss_pred EEEEEeCceEC-----CEeeeeeEEEEeCCcCCHHHHHHHHHH
Confidence 99999999999 999999999999448999999999864
No 18
>PRK14575 putative peptidase; Provisional
Probab=99.90 E-value=2.3e-23 Score=197.00 Aligned_cols=123 Identities=15% Similarity=0.194 Sum_probs=110.9
Q ss_pred CcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 026256 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (241)
Q Consensus 104 ~~~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~H 183 (241)
+.++|+|||++||+.||+|+++++++++++.+.++||+||.||++.+++.+.+.|... |..| .++.+|.+ ..+|
T Consensus 172 l~~lR~iKs~~EI~~~r~A~~i~~~a~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~----~~~~-~~v~~G~~-~~~h 245 (406)
T PRK14575 172 FNELRVIKSPWEIKRLRKSAEITEYGITEASKLIRVGCTSAELTAAYKAAVMSKSETH----FSRF-HLISVGAD-FSPK 245 (406)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc----CCcC-ceEEECCC-cccC
Confidence 4578999999999999999999999999999999999999999999999988887654 1122 56777877 5789
Q ss_pred cCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 184 GIPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 184 g~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
+.|+++++++||+|++|+++.++ ||++|++|||++| +++++++++|++.
T Consensus 246 ~~~~~~~l~~Gd~v~iD~g~~~~-----GY~sditRT~~vG-~~~~~~~~~~~~~ 294 (406)
T PRK14575 246 LIPSNTKACSGDLIKFDCGVDVD-----GYGADIARTFVVG-EPPEITRKIYQTI 294 (406)
T ss_pred CCCCCCcCCCCCEEEEEeceEEC-----CEeeeeEEEEECC-CCCHHHHHHHHHH
Confidence 99999999999999999999999 9999999999999 9999999999864
No 19
>PRK14576 putative endopeptidase; Provisional
Probab=99.90 E-value=5.7e-23 Score=194.24 Aligned_cols=123 Identities=15% Similarity=0.154 Sum_probs=111.7
Q ss_pred CcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 026256 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (241)
Q Consensus 104 ~~~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~H 183 (241)
+.+.|+|||++||+.||+|++++++++.++.+.++||+||.||.+.++..+.+.|... +..| .+|++|.| +.+|
T Consensus 171 l~~lR~iKs~~EI~~~r~A~~i~~~~~~~~~~~i~pG~tE~elaa~~~~~~~~~g~~~----~~~~-~~v~~G~~-~~~h 244 (405)
T PRK14576 171 FNEIRMIKSPWEIEHLRKSAEITEYGIASAAKKIRVGCTAAELTAAFKAAVMSFPETN----FSRF-NLISVGDN-FSPK 244 (405)
T ss_pred HHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCCc----CCCC-CEEEECCc-ccCC
Confidence 4678999999999999999999999999999999999999999999999999887542 1123 67888988 6799
Q ss_pred cCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 184 GIPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 184 g~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
+.|+++++++||+|.+|+++.++ ||++|++|||++| +++++++++|++.
T Consensus 245 ~~~~~~~l~~Gd~v~~d~g~~~~-----GY~sd~tRT~~~G-~p~~~~~~~~~~~ 293 (405)
T PRK14576 245 IIADTTPAKVGDLIKFDCGIDVA-----GYGADLARTFVLG-EPDKLTQQIYDTI 293 (405)
T ss_pred CCCCCcccCCCCEEEEEeceeEC-----CEEeeeeEEEECC-CCCHHHHHHHHHH
Confidence 99999999999999999999999 9999999999999 8999999988864
No 20
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=99.89 E-value=1.3e-22 Score=191.39 Aligned_cols=125 Identities=20% Similarity=0.300 Sum_probs=108.5
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCC----CCCCCceeeecCCCcccc
Q 026256 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLG----YGGFPKSVCTSVNECICH 183 (241)
Q Consensus 108 R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplg----Y~~Fp~~V~tg~N~~i~H 183 (241)
-.+|+++||++||+|++|++++++++.+.++||+|+.||+..+++++.+.++. .+.+ |.+|+..+|+|+|+++||
T Consensus 11 ~~i~~~~eI~~~r~Aa~Ia~~~l~~~~~~ikpG~t~~el~~~~~~~i~~~~a~-~~~~~~~~~~g~afpt~vSvN~~v~H 89 (389)
T TIGR00495 11 YSLSNPEVVTKYKMAGEIANNVLKSVVEACSPGAKVVDICEKGDAFIMEETAK-IFKKEKEMEKGIAFPTCISVNNCVGH 89 (389)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHhhhh-hhcccccccCCCCCCeEEecCCeeeC
Confidence 46999999999999999999999999999999999999999999999987754 2222 445555567889999999
Q ss_pred cCC--C--CCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCC----CCCHHHHHHhhcc
Q 026256 184 GIP--D--SRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPC----NVLHLALSLLRVD 238 (241)
Q Consensus 184 g~P--~--~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~----e~s~e~~rL~ev~ 238 (241)
++| + +++|++||+|+||+|+.++ ||++|++|||+||. .+++++.+++++.
T Consensus 90 ~~P~~~d~~~~Lk~GDvVkIDlG~~id-----GY~aD~arTv~vG~~~~~~~t~~~~~l~~aa 147 (389)
T TIGR00495 90 FSPLKSDQDYILKEGDVVKIDLGCHID-----GFIALVAHTFVVGVAQEEPVTGRKADVIAAA 147 (389)
T ss_pred CCCCCCCCCcCcCCCCEEEEEEEEEEC-----CEEEEEEEEEEECCcccccCCHHHHHHHHHH
Confidence 999 2 4889999999999999999 99999999999992 2577888888765
No 21
>PRK13607 proline dipeptidase; Provisional
Probab=99.89 E-value=6.2e-23 Score=196.42 Aligned_cols=122 Identities=13% Similarity=0.086 Sum_probs=106.5
Q ss_pred CcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 026256 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (241)
Q Consensus 104 ~~~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~H 183 (241)
+.++|+|||++||+.||+|+++++++++++.+.++||+||.||++.+.... ..++.. .+|+++|++|.|++++|
T Consensus 155 l~~lR~iKs~~EI~~mr~A~~i~~~a~~~~~~~i~pG~tE~ei~~~~~~~~-~~~~~~-----~~y~~iva~G~naa~~H 228 (443)
T PRK13607 155 LHYHRAYKTDYELACMREAQKIAVAGHRAAKEAFRAGMSEFDINLAYLTAT-GQRDND-----VPYGNIVALNEHAAVLH 228 (443)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHh-CCCCcC-----CCCCcEEEecCcceEec
Confidence 457899999999999999999999999999999999999999998654332 223221 35889999999999999
Q ss_pred cCCCCC-ccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 184 GIPDSR-ALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 184 g~P~~r-~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
+.|+++ ++++||+|++|+|+.++ ||++|+||||+ | +++++++++|++.
T Consensus 229 ~~~~~~~~~~~Gd~vliD~Ga~~~-----GY~sDiTRTf~-g-~~~~~~~~ly~~v 277 (443)
T PRK13607 229 YTKLDHQAPAEMRSFLIDAGAEYN-----GYAADITRTYA-A-KEDNDFAALIKDV 277 (443)
T ss_pred CCccCCCCCCCCCEEEEEeeEEEC-----CEEecceEEEe-c-CCCHHHHHHHHHH
Confidence 999874 68999999999999999 99999999999 7 7899999998863
No 22
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=99.89 E-value=1.9e-22 Score=171.30 Aligned_cols=112 Identities=23% Similarity=0.367 Sum_probs=106.1
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCC
Q 026256 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (241)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~GD 195 (241)
|++||+||+++++++.++.+.++||+||.||.+.+++.+.++|+++ .+|+++|++|.|+..+|+.|++++|++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~-----~~~~~~v~~g~~~~~~h~~~~~~~l~~gd 75 (208)
T cd01092 1 IELLRKAARIADKAFEELLEFIKPGMTEREVAAELEYFMRKLGAEG-----PSFDTIVASGPNSALPHGVPSDRKIEEGD 75 (208)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC-----CCCCcEEEECccccccCCCCCCcCcCCCC
Confidence 6899999999999999999999999999999999999999999875 25899999999999999999999999999
Q ss_pred eEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 196 TINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 196 iV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
+|++|+++.++ ||++|++|||++| ++++++++++++.
T Consensus 76 ~v~id~g~~~~-----gy~~d~~RT~~~g-~~~~~~~~~~~~~ 112 (208)
T cd01092 76 LVLIDFGAIYD-----GYCSDITRTVAVG-EPSDELKEIYEIV 112 (208)
T ss_pred EEEEEeeeeEC-----CEeccceeEEECC-CCCHHHHHHHHHH
Confidence 99999999999 9999999999999 8999999998864
No 23
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=99.87 E-value=1e-21 Score=172.42 Aligned_cols=110 Identities=15% Similarity=0.009 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCC--CcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCC---CCccC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALE 192 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpG--vTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~---~r~Lq 192 (241)
.||.+..+ .++++.+.+.++|| +||.||++.+++++.+.|.++. .+|+.+||+|+|++++|+.|+ +++|+
T Consensus 6 ~~~~~~~~-~~~~~~~~~~i~~G~~~tE~eiaa~~~~~~~~~g~~~~----~~f~~~v~~g~n~~~~H~~p~~~~~r~l~ 80 (224)
T cd01085 6 HIRDGVAL-VEFLAWLEQEVPKGETITELSAADKLEEFRRQQKGYVG----LSFDTISGFGPNGAIVHYSPTEESNRKIS 80 (224)
T ss_pred HHHHHHHH-HHHHHHHHHHhccCCCEeHHHHHHHHHHHHHHcCCCcC----CCcceEEEecCccCcCCCCcCcccCcccC
Confidence 45665555 59999999999999 9999999999988887765431 258999999999999999998 99999
Q ss_pred CCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 193 DGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 193 ~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
+||+|++|+++.++ ||++|++|||++| ++++++++++++.
T Consensus 81 ~GD~V~iD~g~~~~-----gY~aD~~RT~~vG-~~~~~~~~~~~~~ 120 (224)
T cd01085 81 PDGLYLIDSGGQYL-----DGTTDITRTVHLG-EPTAEQKRDYTLV 120 (224)
T ss_pred CCCEEEEEeCccCC-----CcccccEEeecCC-CCCHHHHHHHHHH
Confidence 99999999999999 9999999999999 9999999998864
No 24
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=99.85 E-value=5.6e-21 Score=162.95 Aligned_cols=110 Identities=25% Similarity=0.363 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHH-HHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCC
Q 026256 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQM-IIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (241)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~-i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~GD 195 (241)
|+||+|+++++++++++.+.++||+||.||.+.+.+. +.++|... .+|+.++++|.|...+|+.|++++|++||
T Consensus 1 e~~R~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~~g~~~-----~~~~~~~~~g~~~~~~~~~~~~~~l~~gd 75 (207)
T PF00557_consen 1 ECMRKAARIADAAMEAAMEALRPGMTEYEIAAAIERAMLRRHGGEE-----PAFPPIVGSGPNTDLPHYTPTDRRLQEGD 75 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCBHHHHHHHHHHHHHHHTTTTE-----ESSESEEEECCCCGETTTBCCSSBESTTE
T ss_pred CHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHHcCCCc-----ccCCceEecCCcceecceeccceeeecCC
Confidence 6899999999999999999999999999999999998 56677543 35789999999999999999999999999
Q ss_pred eEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 196 TINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 196 iV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
+|.+|+++.++ ||++|++|||++| +++++++++++.
T Consensus 76 ~v~id~~~~~~-----gy~~d~~Rt~~~G--~~~~~~~~~~~~ 111 (207)
T PF00557_consen 76 IVIIDFGPRYD-----GYHADIARTFVVG--PTPEQRRAYEAA 111 (207)
T ss_dssp EEEEEEEEEET-----TEEEEEEEEEESS--SHHHHHHHHHHH
T ss_pred cceeeccceee-----eeEeeeeeEEEEe--ecccccchhhhh
Confidence 99999999999 9999999999998 889999998763
No 25
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=99.85 E-value=1.3e-20 Score=157.50 Aligned_cols=111 Identities=23% Similarity=0.358 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCC
Q 026256 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGD 195 (241)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~GD 195 (241)
|+.||+|+++++++++.+.+.++||+||.||.+.+++.+.++|+++ .|+.++.+|.|...+|+.|+++++++||
T Consensus 1 i~~~r~a~~i~~~~~~~~~~~~~~G~te~ei~~~~~~~~~~~g~~~------~~~~~v~~g~~~~~~h~~~~~~~i~~gd 74 (207)
T cd01066 1 IARLRKAAEIAEAAMAAAAEAIRPGVTEAEVAAAIEQALRAAGGYP------AGPTIVGSGARTALPHYRPDDRRLQEGD 74 (207)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcEEEECccccCcCCCCCCCCcCCCC
Confidence 5789999999999999999999999999999999999999999943 4778888898889999999999999999
Q ss_pred eEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 196 TINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 196 iV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
+|++|+++.++ ||++|++|||++| ++++++++++++.
T Consensus 75 ~v~~d~g~~~~-----gy~~d~~rt~~~g-~~~~~~~~~~~~~ 111 (207)
T cd01066 75 LVLVDLGGVYD-----GYHADLTRTFVIG-EPSDEQRELYEAV 111 (207)
T ss_pred EEEEEeceeEC-----CCccceeceeEcC-CCCHHHHHHHHHH
Confidence 99999999999 9999999999999 8999999998764
No 26
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=99.85 E-value=1.5e-20 Score=164.39 Aligned_cols=117 Identities=21% Similarity=0.402 Sum_probs=95.6
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCC--CCC-CCCCCCCCceeeecCCCcccccCC----CC
Q 026256 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA--YPS-PLGYGGFPKSVCTSVNECICHGIP----DS 188 (241)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga--~ps-plgY~~Fp~~V~tg~N~~i~Hg~P----~~ 188 (241)
+++||+|++|++++++++.+.++||+||.||+..+.+.+.+... ++. ..++.+++...|++.|++.||+.| ++
T Consensus 1 ~~~~r~A~~I~~~~~~~~~~~i~pG~te~ei~~~~e~~i~~~~~~~~~~~~~g~~g~~~~~~v~~n~~~~H~~p~~~~~~ 80 (228)
T cd01089 1 VTKYKTAGQIANKVLKQVISLCVPGAKVVDLCEKGDKLILEELGKVYKKEKKLEKGIAFPTCISVNNCVCHFSPLKSDAT 80 (228)
T ss_pred CHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHhhcccccCcccccCCCCcCeEeccCceeecCCCCCCCCC
Confidence 36899999999999999999999999999998888777777422 221 123333333345557999999996 68
Q ss_pred CccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCH-----HHHHHhhcc
Q 026256 189 RALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLH-----LALSLLRVD 238 (241)
Q Consensus 189 r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~-----e~~rL~ev~ 238 (241)
++|++||+|+||+++.++ ||++|++|||++| ++++ ++++++++.
T Consensus 81 ~~l~~Gd~v~iD~g~~~~-----GY~sD~tRT~~vG-~~~~~~~~~~~~~~~~~~ 129 (228)
T cd01089 81 YTLKDGDVVKIDLGCHID-----GYIAVVAHTIVVG-AEAETPVTGKKADVIAAA 129 (228)
T ss_pred cccCCCCEEEEEEEEEEC-----CEEEEEEEEEEeC-CcCccccchHHHHHHHHH
Confidence 899999999999999999 9999999999999 7774 788888754
No 27
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=99.84 E-value=5.4e-20 Score=176.84 Aligned_cols=118 Identities=22% Similarity=0.244 Sum_probs=101.2
Q ss_pred CCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHc----CCCCCCCCCCCCCceeeecCCCcc
Q 026256 106 SGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDN----GAYPSPLGYGGFPKSVCTSVNECI 181 (241)
Q Consensus 106 ~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~----Ga~psplgY~~Fp~~V~tg~N~~i 181 (241)
+.+..+|++||+.||+|++|++++++++.+.|+||+|+.||+..+++.+.+. |+... .+||+ |+|+|++.
T Consensus 148 ~~~~~~s~~EI~~~R~AaeIa~~vl~~~~~~IkpG~se~EIa~~ie~~ir~~~~~~G~~~g----~aFPt--~vS~N~~a 221 (470)
T PTZ00053 148 RELEKLSEEQYQDLRRAAEVHRQVRRYAQSVIKPGVKLIDICERIESKSRELIEADGLKCG----WAFPT--GCSLNHCA 221 (470)
T ss_pred CccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCHHHHHHHHHHHHHHHHHhcCCccc----CCCCc--eeecCccc
Confidence 4456689999999999999999999999999999999999999888766544 55421 36888 56899999
Q ss_pred cccCCC---CCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 182 CHGIPD---SRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 182 ~Hg~P~---~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
||+.|. +++|++||+|.||+|+.++ ||++|++|||++| +++.+|+++.
T Consensus 222 aH~tP~~gd~~vLk~GDvVkID~G~~vd-----GYiaD~ArTv~vg----~~~~~L~eAv 272 (470)
T PTZ00053 222 AHYTPNTGDKTVLTYDDVCKLDFGTHVN-----GRIIDCAFTVAFN----PKYDPLLQAT 272 (470)
T ss_pred cCCCCCCCCCcEecCCCeEEEEEeEEEC-----CEEEeEEEEEEeC----HHHHHHHHHH
Confidence 999995 7899999999999999999 9999999999998 3566666653
No 28
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=99.82 E-value=1.8e-19 Score=164.20 Aligned_cols=108 Identities=24% Similarity=0.398 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCC---CC
Q 026256 113 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SR 189 (241)
Q Consensus 113 ~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~---~r 189 (241)
-+||++||+|++|++++++.+.+.++||+|+.||++.+++.+.++|+.+ .||+.+ +.|++.+|+.|. ++
T Consensus 2 ~~~i~~~r~A~~I~~~~~~~~~~~i~~G~se~el~~~~e~~~~~~g~~~------aFp~~v--s~n~~~~H~~p~~~d~~ 73 (295)
T TIGR00501 2 IERAEKWIEAGKIHSKVRREAADRIVPGVKLLEVAEFVENRIRELGAEP------AFPCNI--SINECAAHFTPKAGDKT 73 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCcCCCCHHHHHHHHHHHHHHcCCCC------CCCcce--ecCCEeeCCCCCCCcCc
Confidence 4799999999999999999999999999999999999999999999986 488865 579999999984 67
Q ss_pred ccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhc
Q 026256 190 ALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRV 237 (241)
Q Consensus 190 ~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev 237 (241)
+|++||+|+||+|+.++ ||++|++|||++| +. +++++++
T Consensus 74 ~l~~GDvV~iD~G~~~d-----GY~aD~arT~~vG-~~---~~~l~~a 112 (295)
T TIGR00501 74 VFKDGDVVKLDLGAHVD-----GYIADTAITVDLG-DQ---YDNLVKA 112 (295)
T ss_pred cCCCCCEEEEEEeEEEC-----CEEEEEEEEEEeC-cH---HHHHHHH
Confidence 89999999999999999 9999999999999 43 4555554
No 29
>PRK08671 methionine aminopeptidase; Provisional
Probab=99.80 E-value=5.3e-19 Score=160.67 Aligned_cols=106 Identities=26% Similarity=0.431 Sum_probs=94.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCC---CCcc
Q 026256 115 GIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRAL 191 (241)
Q Consensus 115 EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~---~r~L 191 (241)
+|++||+|++|++++++.+.+.++||+||.||++.+++.+.++|+.++ ||+.+ +.|+..+|+.|. +++|
T Consensus 1 ~i~~~r~A~~I~~~~~~~~~~~i~pG~se~ei~~~~~~~i~~~g~~~a------fp~~v--s~n~~~~H~~p~~~d~~~l 72 (291)
T PRK08671 1 ELEKYLEAGKIASKVREEAAKLIKPGAKLLDVAEFVENRIRELGAKPA------FPCNI--SINEVAAHYTPSPGDERVF 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhccCCCcHHHHHHHHHHHHHHcCCccC------CCCEE--eeCCCccCCCCCCCCCccc
Confidence 589999999999999999999999999999999999999999998764 77654 578889999985 6889
Q ss_pred CCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhc
Q 026256 192 EDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRV 237 (241)
Q Consensus 192 q~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev 237 (241)
++||+|.||+|+.++ ||++|++||+++| + ++++++++
T Consensus 73 ~~GDvV~iD~G~~~d-----GY~aD~arT~~vG-~---~~~~l~~a 109 (291)
T PRK08671 73 PEGDVVKLDLGAHVD-----GYIADTAVTVDLG-G---KYEDLVEA 109 (291)
T ss_pred CCCCEEEEEEeEEEC-----CEEEEEEEEEEeC-h---hHHHHHHH
Confidence 999999999999999 9999999999999 3 45556554
No 30
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=99.78 E-value=4.1e-19 Score=165.11 Aligned_cols=127 Identities=12% Similarity=0.117 Sum_probs=117.4
Q ss_pred CCCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcc
Q 026256 102 IGIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECI 181 (241)
Q Consensus 102 ~~~~~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i 181 (241)
|++.+.|.|||+.||+.||.|++|+++++.+++.+++||+.|.++...+......+|+-.+ .+|..++|+|.|+++
T Consensus 177 p~m~E~RviKs~~EieviRya~kISseaH~~vM~~~~pg~~Eyq~eslF~hh~y~~GGcRh----~sYtcIc~sG~ns~v 252 (492)
T KOG2737|consen 177 PILAECRVIKSSLEIEVIRYANKISSEAHIEVMRAVRPGMKEYQLESLFLHHSYSYGGCRH----LSYTCICASGDNSAV 252 (492)
T ss_pred HHHhhheeeCCHHHHHHHHHHHhhccHHHHHHHHhCCchHhHHhHHHHHHHhhhccCCccc----cccceeeecCCCcce
Confidence 3567899999999999999999999999999999999999999999999999988876432 357899999999999
Q ss_pred ccc----CCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhc
Q 026256 182 CHG----IPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRV 237 (241)
Q Consensus 182 ~Hg----~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev 237 (241)
.|+ .|+++.+|+||...+|+|+.|. +|.+|+|++|...|+.+++|+.+|++
T Consensus 253 LHYgha~apNd~~iqdgd~cLfDmGaey~-----~yaSDITcsFP~nGKFTadqk~VYna 307 (492)
T KOG2737|consen 253 LHYGHAGAPNDRTIQDGDLCLFDMGAEYH-----FYASDITCSFPVNGKFTADQKLVYNA 307 (492)
T ss_pred eeccccCCCCCcccCCCCEEEEecCccee-----eeecccceeccCCCccchhHHHHHHH
Confidence 997 7999999999999999999999 99999999999976999999999984
No 31
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=99.78 E-value=2.1e-18 Score=156.74 Aligned_cols=105 Identities=33% Similarity=0.492 Sum_probs=94.3
Q ss_pred HHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCC---CCccC
Q 026256 116 IECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPD---SRALE 192 (241)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~---~r~Lq 192 (241)
+++||+|+++++++++++.+.++||+||.||++.+++.+.++|+.++ ||. ++|.|++.+|+.|. +++|+
T Consensus 1 ~~~~r~Aa~I~~~a~~~~~~~i~pG~te~ei~~~~~~~i~~~G~~~a------fp~--~is~n~~~~H~~p~~~d~~~l~ 72 (291)
T cd01088 1 LEKYREAGEIHRQVRKYAQSLIKPGMTLLEIAEFVENRIRELGAGPA------FPV--NLSINECAAHYTPNAGDDTVLK 72 (291)
T ss_pred CHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHHHcCCCCC------CCc--eeccCCEeeCCCCCCCCCcccC
Confidence 36899999999999999999999999999999999999999998763 765 47899999999985 48999
Q ss_pred CCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhc
Q 026256 193 DGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRV 237 (241)
Q Consensus 193 ~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev 237 (241)
+||+|.+|+|+.++ ||++|++|||++| + ++++++++
T Consensus 73 ~GDvV~iD~G~~~d-----GY~sD~arT~~vg-~---~~~~l~ea 108 (291)
T cd01088 73 EGDVVKLDFGAHVD-----GYIADSAFTVDFD-P---KYDDLLEA 108 (291)
T ss_pred CCCEEEEEEEEEEC-----CEEEEEEEEEecC-h---hHHHHHHH
Confidence 99999999999999 9999999999999 4 55566654
No 32
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=99.75 E-value=2.2e-18 Score=161.49 Aligned_cols=124 Identities=15% Similarity=0.093 Sum_probs=117.5
Q ss_pred CcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 026256 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (241)
Q Consensus 104 ~~~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~H 183 (241)
+.++|.||||.|++.||+||.|+.+++-..+..-|++..|..+.+.++..++..|++- ..||+.|+.|.|+...|
T Consensus 222 i~~lRlIKSpaEl~~Mr~a~~I~sq~~~~~m~~sr~~~~E~~l~a~~eye~r~rGad~-----~AYpPVVAgG~na~tIH 296 (488)
T KOG2414|consen 222 IERLRLIKSPAELELMREACNIASQTFSETMFGSRDFHNEAALSALLEYECRRRGADR-----LAYPPVVAGGKNANTIH 296 (488)
T ss_pred HHHHHccCCHHHHHHHHHHhhhhhHHHHHHHhhccCCcchhhHhhhhhhheeecCccc-----cccCCeeecCcccceEE
Confidence 4578999999999999999999999999999999999999999999999999999985 46899999999999999
Q ss_pred cCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhc
Q 026256 184 GIPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRV 237 (241)
Q Consensus 184 g~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev 237 (241)
+.-++..|.++|.|.+|.|+.++ ||.+|+||||.+-|+.++.|+.|||+
T Consensus 297 Y~~Nnq~l~d~emVLvDaGcelg-----GYvSDITRTWP~sGkFs~~Qr~LYea 345 (488)
T KOG2414|consen 297 YVRNNQLLKDDEMVLVDAGCELG-----GYVSDITRTWPISGKFSDAQRDLYEA 345 (488)
T ss_pred EeecccccCCCcEEEEecCcccC-----ceEccceeccCCCCccCcHHHHHHHH
Confidence 99999999999999999999999 99999999999966999999999986
No 33
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=99.66 E-value=6.1e-16 Score=137.52 Aligned_cols=115 Identities=11% Similarity=0.086 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHHHHHhH-----hcCCC--CcHHHHHHHHHHHHHHcCCCC-----CCCCCCCCCceeeecCCC-ccc
Q 026256 116 IECMRVSGRLAAQVLEYAGT-----LVKPG--ITTDEIDKAVHQMIIDNGAYP-----SPLGYGGFPKSVCTSVNE-CIC 182 (241)
Q Consensus 116 Ie~mR~A~~ia~~~l~~a~~-----~IkpG--vTe~EId~~v~~~i~~~Ga~p-----splgY~~Fp~~V~tg~N~-~i~ 182 (241)
++.||+|++++..++..... .|.+| +|+.+|...++..+.+.+... ..+. ..|+++|++|.|. ..+
T Consensus 1 ~~~~~~a~~~~~~~~~~~~~~~~~~~id~~~~~t~~~l~~~~e~~~~~~~~~~~~~~~~~~~-~~y~~iv~sG~~~~~l~ 79 (243)
T cd01091 1 LNNIKKASDATVDVLKKFFVDEVEEIIDQEKKVTHSKLSDKVEKAIEDKKKYKAKLDPEQLD-WCYPPIIQSGGNYDLLK 79 (243)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHhCchhhhcCCCHHHcC-cccCCeEeECcCcccCC
Confidence 46899999999999975555 89999 999999999999999888541 1112 2589999999999 899
Q ss_pred ccCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhcc
Q 026256 183 HGIPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRVD 238 (241)
Q Consensus 183 Hg~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev~ 238 (241)
|+.++++.++.||+|.+|+|+.|+ ||++|++|||++| ++++++++|++.
T Consensus 80 h~~~s~~~~~~~~~vl~d~G~~y~-----gY~sditRT~~v~--p~~~~~~~y~~~ 128 (243)
T cd01091 80 SSSSSDKLLYHFGVIICSLGARYK-----SYCSNIARTFLID--PTSEQQKNYNFL 128 (243)
T ss_pred CCCCCccccCCCCEEEEEeCcccC-----CEeecceEEEEcC--CCHHHHHHHHHH
Confidence 999999999999999999999999 9999999999998 699999999863
No 34
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=99.08 E-value=5.3e-10 Score=103.96 Aligned_cols=113 Identities=25% Similarity=0.452 Sum_probs=93.6
Q ss_pred CCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcC--CCCC-CCCCC--CCCceeeecCCCccc
Q 026256 108 PEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNG--AYPS-PLGYG--GFPKSVCTSVNECIC 182 (241)
Q Consensus 108 R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~G--a~ps-plgY~--~Fp~~V~tg~N~~i~ 182 (241)
-.|-++.-+-++|-|++|+..++..+.+++.||.+..||...-..+|.+.- .|-. --.+. .||+ |+++|+++|
T Consensus 13 ~tia~~~vvtKYk~AgeI~n~~lk~V~~~~~~gasv~eiC~~GD~~i~E~t~kiYK~eK~~~KGIAfPT--~Isvnncv~ 90 (398)
T KOG2776|consen 13 KTIANDSVVTKYKMAGEIVNKVLKSVVELCQPGASVREICEKGDSLILEETGKIYKKEKDFEKGIAFPT--SISVNNCVC 90 (398)
T ss_pred cccccHHHHhhhhhHHHHHHHHHHHHHHHhcCCchHHHHHHhhhHHHHHHHHHHHhhhhhhhccccccc--eecccceee
Confidence 356788899999999999999999999999999999999988888777752 2221 00111 3777 577999999
Q ss_pred ccCC---C-CCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCC
Q 026256 183 HGIP---D-SRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVL 228 (241)
Q Consensus 183 Hg~P---~-~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s 228 (241)
|..| + +..|++||+|.||+|+..| ||.+-.+.|++|+ .++
T Consensus 91 h~sPlksd~~~~Lk~GDvVKIdLG~HiD-----GfiA~vaHT~VV~-~~~ 134 (398)
T KOG2776|consen 91 HFSPLKSDADYTLKEGDVVKIDLGVHID-----GFIALVAHTIVVG-PAP 134 (398)
T ss_pred ccCcCCCCCcccccCCCEEEEEeeeeec-----cceeeeeeeEEec-cCC
Confidence 9988 2 6789999999999999999 9999999999998 443
No 35
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=98.99 E-value=9.8e-10 Score=107.59 Aligned_cols=124 Identities=12% Similarity=0.051 Sum_probs=98.8
Q ss_pred CCcCCCCcCCHHHHHHHHHHHHHHHHHHHH----HhHhcCCC--CcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeee-
Q 026256 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEY----AGTLVKPG--ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCT- 175 (241)
Q Consensus 103 ~~~~~R~VKs~~EIe~mR~A~~ia~~~l~~----a~~~IkpG--vTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~t- 175 (241)
.+..++++|+++|++.||.|----..|+-+ ....+..| +||.+++..++++=.++..+-. ..|+++.++
T Consensus 300 pi~~~kAiKN~~E~~gmr~shirD~~Alve~~~wle~~~~~g~~itE~~~A~kle~fR~~~~~fmg----lSFeTIS~s~ 375 (606)
T KOG2413|consen 300 PISRAKAIKNDDELKGMRNSHIRDGAALVEYFAWLEKELHKGYTITEYDAADKLEEFRSRQDHFMG----LSFETISSSV 375 (606)
T ss_pred HHHHHHHhcChHHhhhhhhcchhhHHHHHHHHHHHhhhhhcCcccchhhHHHHHHHHHHhhccccC----cCcceeeccC
Confidence 345667899999999999886444444444 34455567 8999999999988877765432 259999966
Q ss_pred cCCCcccccCCC---CCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhh
Q 026256 176 SVNECICHGIPD---SRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLR 236 (241)
Q Consensus 176 g~N~~i~Hg~P~---~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~e 236 (241)
|+|.+++|+.|. ++.+-+..+..+|.|+.|. .| .+|+|||+.+| +|+++.++-|-
T Consensus 376 G~NgAviHYsP~~e~n~~i~~~kiyL~DSGaQY~----DG-TTDvTRT~Hfg-ePs~eek~~yT 433 (606)
T KOG2413|consen 376 GPNGAVIHYSPPAETNRIVSPDKIYLCDSGAQYL----DG-TTDVTRTVHFG-EPTAEEKEAYT 433 (606)
T ss_pred CCCceeeecCCCccccceecCceEEEEccCcccc----cC-ccceeEEEecC-CCCHHHHHHHH
Confidence 999999999985 5689999999999999885 16 89999999999 99999887664
No 36
>KOG2775 consensus Metallopeptidase [General function prediction only]
Probab=98.73 E-value=1.3e-07 Score=86.68 Aligned_cols=115 Identities=24% Similarity=0.349 Sum_probs=92.6
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHH----HHHHcCCCCCCCCCCCCCceeeecCCCcccccCC
Q 026256 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQ----MIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP 186 (241)
Q Consensus 111 Ks~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~----~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P 186 (241)
-..+...-+|+|+.+.+++-.++...|+||||.-||...++. .+.++|.... -+||+. .|.|.|..|+.|
T Consensus 80 ~~~~i~~d~rraAE~HRqvR~yv~s~ikPGmtm~ei~e~iEnttR~li~e~gl~aG----i~FPtG--~SlN~cAAHyTp 153 (397)
T KOG2775|consen 80 TESDIYQDLRRAAEAHRQVRKYVQSIIKPGMTMIEICETIENTTRKLILENGLNAG----IGFPTG--CSLNHCAAHYTP 153 (397)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHhcccccc----ccCCCc--ccccchhhhcCC
Confidence 344556789999999999999999999999999999988764 4555565432 258885 678999999998
Q ss_pred C---CCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhh
Q 026256 187 D---SRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLR 236 (241)
Q Consensus 187 ~---~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~e 236 (241)
+ ..+|+.+|+..||+|...+ |-.-|++.|+.+.-..++-...+-+
T Consensus 154 NaGd~tVLqydDV~KiDfGthi~-----GrIiDsAFTv~F~p~~d~Ll~Avre 201 (397)
T KOG2775|consen 154 NAGDKTVLKYDDVMKIDFGTHID-----GRIIDSAFTVAFNPKYDPLLAAVRE 201 (397)
T ss_pred CCCCceeeeecceEEEecccccc-----CeEeeeeeEEeeCccccHHHHHHHH
Confidence 4 5689999999999999999 9999999999997445555444443
No 37
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=98.09 E-value=8.3e-06 Score=82.24 Aligned_cols=124 Identities=15% Similarity=0.145 Sum_probs=89.4
Q ss_pred CCcCCCCcCCHHHHHHHHHHHHHHHHHHHHH-----hHhcCCC--CcHHHHHHHHHHHHHHc----CCCCCCCCCCCCCc
Q 026256 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYA-----GTLVKPG--ITTDEIDKAVHQMIIDN----GAYPSPLGYGGFPK 171 (241)
Q Consensus 103 ~~~~~R~VKs~~EIe~mR~A~~ia~~~l~~a-----~~~IkpG--vTe~EId~~v~~~i~~~----Ga~psplgY~~Fp~ 171 (241)
.+..+.+||++.||+.||+|++++..++... ..+|-.| ||-.-+...+...+-+. |..|..+. +-||+
T Consensus 130 ~ls~l~avKDd~Ei~~irksa~~s~~vm~k~~~~~~~~aiD~ekkvthskLsD~~e~~I~~~k~s~~l~~~~~d-~cY~P 208 (960)
T KOG1189|consen 130 GLSKLFAVKDDEEIANIRKSAAASSAVMNKYLVDELVEAIDEEKKVTHSKLSDLMESAIEDKKYSPGLDPDLLD-MCYPP 208 (960)
T ss_pred hhhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchhhhHHHHHHHHHHhhccccCcccCccccc-cccCh
Confidence 3567889999999999999999999999833 2344444 45445655665555543 33332222 23788
Q ss_pred eeeecCCCc-ccccCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhhc
Q 026256 172 SVCTSVNEC-ICHGIPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLRV 237 (241)
Q Consensus 172 ~V~tg~N~~-i~Hg~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~ev 237 (241)
++.+|.+-- .+-...++..| + +|.--+|++|+ +|++.++|||++- |+.++++.|+.
T Consensus 209 IiqSGg~ydlk~sa~s~~~~L--~-~I~cs~G~Ryn-----sYCSNv~RT~Lid--pssemq~nY~f 265 (960)
T KOG1189|consen 209 IIQSGGKYDLKPSAVSDDNHL--H-VILCSLGIRYN-----SYCSNVSRTYLID--PSSEMQENYEF 265 (960)
T ss_pred hhhcCCccccccccccccccc--c-eEEeeccchhh-----hhhccccceeeec--chHHHHHHHHH
Confidence 888877743 34445677788 4 77777999999 9999999999996 89998888753
No 38
>cd01066 APP_MetAP A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as metallopeptidase family M24. This family of enzymes is able to cleave amido-, imido- and amidino-containing bonds. Members exibit relatively narrow substrate specificity compared to other metallo-aminopeptidases, suggesting they play roles in regulation of biological processes rather than general protein degradation.
Probab=98.03 E-value=0.00011 Score=61.16 Aligned_cols=102 Identities=20% Similarity=0.186 Sum_probs=74.6
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCe
Q 026256 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDT 196 (241)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~GDi 196 (241)
+.++++.+.+.++++.+.+.++||++..||.+++++.+.++|...... +.....+.....+...-....+.+|++|.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~i~pG~~~~ei~~~~~~~~~~~g~~~~~~--~~~Gh~iG~~~~e~~~~~~~~~~~l~~gmv 179 (207)
T cd01066 102 DEQRELYEAVREAQEAALAALRPGVTAEEVDAAAREVLEEHGLGPNFG--HRTGHGIGLEIHEPPVLKAGDDTVLEPGMV 179 (207)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCccccCC--CCCccccCcccCCCCCcCCCCCCCcCCCCE
Confidence 578999999999999999999999999999999999999998742111 112222222222211101124678999999
Q ss_pred EEEEeeEEEcCcCCCcEEEceEeeeecC
Q 026256 197 INIDVTVYLNQMIEPGFWGASGSLPLPP 224 (241)
Q Consensus 197 V~IDvg~~~~~~~~~GY~~D~tRT~~vG 224 (241)
+.|+.+.+.. .++..-+..|++|.
T Consensus 180 ~~iep~~~~~----~~~g~~~ed~v~vt 203 (207)
T cd01066 180 FAVEPGLYLP----GGGGVRIEDTVLVT 203 (207)
T ss_pred EEECCEEEEC----CCcEEEeeeEEEEe
Confidence 9999999876 14778888999886
No 39
>cd01092 APP-like Similar to Prolidase and Aminopeptidase P. The members of this subfamily presumably catalyse hydrolysis of Xaa-Pro dipeptides and/or release of any N-terminal amino acid, including proline, that is linked with proline.
Probab=97.82 E-value=0.00033 Score=59.26 Aligned_cols=96 Identities=24% Similarity=0.284 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccC----C-CCCcc
Q 026256 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI----P-DSRAL 191 (241)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~----P-~~r~L 191 (241)
+.+|++.+.+.++++.+.++++||++..||.+.+++.+.++|..+. |+..++-|..- ..|.. + ++.+|
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~pG~~~~di~~~~~~~~~~~g~~~~------~~~~~Gh~iG~-~~~e~p~i~~~~~~~l 175 (208)
T cd01092 103 DELKEIYEIVLEAQQAAIKAVKPGVTAKEVDKAARDVIEEAGYGEY------FIHRTGHGVGL-EVHEAPYISPGSDDVL 175 (208)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCcccc------CCCCCccccCc-ccCcCCCcCCCCCCCc
Confidence 4678899999999999999999999999999999999999997532 22222111110 12221 2 46789
Q ss_pred CCCCeEEEEeeEEEcCcCCCcE-EEceEeeeecC
Q 026256 192 EDGDTINIDVTVYLNQMIEPGF-WGASGSLPLPP 224 (241)
Q Consensus 192 q~GDiV~IDvg~~~~~~~~~GY-~~D~tRT~~vG 224 (241)
++|.++.|+.+.+.. |+ -.-+..|++|.
T Consensus 176 ~~gmv~~iep~~~~~-----~~~g~~~ed~v~vt 204 (208)
T cd01092 176 EEGMVFTIEPGIYIP-----GKGGVRIEDDVLVT 204 (208)
T ss_pred CCCCEEEECCeEEec-----CCCEEEeeeEEEEC
Confidence 999999999998875 44 33467888876
No 40
>PRK15173 peptidase; Provisional
Probab=97.71 E-value=0.00046 Score=63.86 Aligned_cols=101 Identities=13% Similarity=0.101 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceee--ecCCCcccccCCCCCccCCC
Q 026256 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGIPDSRALEDG 194 (241)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~--tg~N~~i~Hg~P~~r~Lq~G 194 (241)
+..|++.+++.++++.+.++++||++..||++.+.+.+.+.|....+.++ +.+.++ .|.++.-.-...++.+|++|
T Consensus 202 ~~~~~~y~~v~ea~~~~~~~irPG~~~~dv~~a~~~~~~~~G~~~~~~~~--~GHGiG~~lg~~E~P~i~~~~~~~Le~G 279 (323)
T PRK15173 202 EITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGH--LGHGNGVFLGLEESPFVSTHATESFTSG 279 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCC--CCCcCCCCCCcCCCCCCCCCCCCccCCC
Confidence 35678889999999999999999999999999999999999864322222 122232 24443211111246789999
Q ss_pred CeEEEEeeEEEcCcCCCcE-EEceEeeeecC
Q 026256 195 DTINIDVTVYLNQMIEPGF-WGASGSLPLPP 224 (241)
Q Consensus 195 DiV~IDvg~~~~~~~~~GY-~~D~tRT~~vG 224 (241)
.++.|+.+.+.. |. -.-+..|++|.
T Consensus 280 MV~tiEPgiy~~-----g~ggvriEDtvlVT 305 (323)
T PRK15173 280 MVLSLETPYYGY-----NLGSIMIEDMILIN 305 (323)
T ss_pred CEEEECCEEEcC-----CCcEEEEeeEEEEc
Confidence 999999988864 32 24678999986
No 41
>PRK05716 methionine aminopeptidase; Validated
Probab=97.66 E-value=0.0006 Score=59.97 Aligned_cols=104 Identities=17% Similarity=0.182 Sum_probs=71.1
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCc--cccc-CC-CCCccCC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG-IP-DSRALED 193 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~--i~Hg-~P-~~r~Lq~ 193 (241)
..|++.+.+.++++++.++++||++-.||++++++.+.++|... ..+|.+ ..+.....+. +.++ .+ ++.+|++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~pG~~~~dv~~~~~~~~~~~g~~~-~~~~~G--HgiG~~~~e~p~~~~~~~~~~~~~le~ 195 (252)
T PRK05716 119 EDKRLCEVTKEALYLGIAAVKPGARLGDIGHAIQKYAEAEGFSV-VREYCG--HGIGRKFHEEPQIPHYGAPGDGPVLKE 195 (252)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCee-ecCccc--cccCCccCCCCccCcCCCCCCCCEecC
Confidence 46778888999999999999999999999999999999998764 222222 2222222221 1111 12 4678999
Q ss_pred CCeEEEEeeEEEcCc-------------CCCcEEEceEeeeecC
Q 026256 194 GDTINIDVTVYLNQM-------------IEPGFWGASGSLPLPP 224 (241)
Q Consensus 194 GDiV~IDvg~~~~~~-------------~~~GY~~D~tRT~~vG 224 (241)
|+++.|+.+.+.... .+.++..-+.-|++|.
T Consensus 196 Gmv~~vEp~i~~~~~~~~~~~~~~~~~~~~g~~g~~~ed~v~Vt 239 (252)
T PRK05716 196 GMVFTIEPMINAGKREVKTLKDGWTVVTKDGSLSAQYEHTVAVT 239 (252)
T ss_pred CCEEEEccEEEcCCCceEEcCCCCEEEccCCCcEEeeeeEEEEc
Confidence 999999988875200 0113455677888887
No 42
>PRK14575 putative peptidase; Provisional
Probab=97.63 E-value=0.00063 Score=64.80 Aligned_cols=100 Identities=12% Similarity=0.090 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceee--ecCCCcccccCCCCCccCCCC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGIPDSRALEDGD 195 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~--tg~N~~i~Hg~P~~r~Lq~GD 195 (241)
..|++.+++.++++.+.+++|||++..||++++.+.+.+.|....+..+ +.+.++ .|.++.-.-..-++.+|++|.
T Consensus 286 ~~~~~~~~~~~a~~~~~~~~rpG~~~~dv~~a~~~~~~~~G~~~~~~~~--~GHGiG~~lg~~e~P~i~~~~~~~Le~GM 363 (406)
T PRK14575 286 ITRKIYQTIRTGHEHMLSMVAPGVKMKDVFDSTMEVIKKSGLPNYNRGH--LGHGNGVFLGLEESPFVSTHATESFTSGM 363 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCC--CCCcccCCCCCccCCCCCCCCCCCcCCCC
Confidence 4678888999999999999999999999999999999998864432222 223333 233332111112467899999
Q ss_pred eEEEEeeEEEcCcCCCcE-EEceEeeeecC
Q 026256 196 TINIDVTVYLNQMIEPGF-WGASGSLPLPP 224 (241)
Q Consensus 196 iV~IDvg~~~~~~~~~GY-~~D~tRT~~vG 224 (241)
++.|+.+.+.. |. -.-+.-|++|.
T Consensus 364 v~tiEpgiy~~-----g~gGvriEDtvlVT 388 (406)
T PRK14575 364 VLSLETPYYGY-----NLGSIMIEDMILIN 388 (406)
T ss_pred EEEECCeeecC-----CCcEEEEEeEEEEc
Confidence 99999998875 43 35688999996
No 43
>cd01090 Creatinase Creatine amidinohydrolase. E.C.3.5.3.3. Hydrolyzes creatine to sarcosine and urea.
Probab=97.63 E-value=0.00087 Score=58.91 Aligned_cols=103 Identities=15% Similarity=0.091 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccC------CCCCcc
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI------PDSRAL 191 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~------P~~r~L 191 (241)
..|++.+++.++++++.+++|||++-.||++++.+.+.++|...... +++...+....++. +|+. .++.+|
T Consensus 110 ~~~~~~~~~~ea~~~~~~~~rpG~~~~~v~~a~~~~~~~~G~~~~~~--~~~GHgiGl~~he~-~~~~g~~~~~~~~~~L 186 (228)
T cd01090 110 AHLKIWEANVAVHERGLELIKPGARCKDIAAELNEMYREHDLLRYRT--FGYGHSFGVLSHYY-GREAGLELREDIDTVL 186 (228)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCcccc--cccCcccccccccC-CCccccccCCCCCCcc
Confidence 47788999999999999999999999999999999999998654211 12233333333332 2221 135789
Q ss_pred CCCCeEEEEeeEEEcCcCCCcE-EEceEeeeecC
Q 026256 192 EDGDTINIDVTVYLNQMIEPGF-WGASGSLPLPP 224 (241)
Q Consensus 192 q~GDiV~IDvg~~~~~~~~~GY-~~D~tRT~~vG 224 (241)
++|+++.++.+.+.....+ |. ---+..|++|.
T Consensus 187 e~GMV~~iEP~i~~~~~~~-g~gG~ried~v~Vt 219 (228)
T cd01090 187 EPGMVVSMEPMIMLPEGQP-GAGGYREHDILVIN 219 (228)
T ss_pred CCCCEEEECCEEeecccCC-CCcEEEeeeEEEEC
Confidence 9999999999988730000 21 22378888886
No 44
>cd01086 MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.62 E-value=0.00096 Score=58.16 Aligned_cols=85 Identities=22% Similarity=0.278 Sum_probs=61.7
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCc--cc-ccCC-CCCccCC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--IC-HGIP-DSRALED 193 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~--i~-Hg~P-~~r~Lq~ 193 (241)
.+|++.+.+.++++.+.++++||++-.||++++++.+.+.|... ..++.+ ..+.....+. +. +..+ ++.+|++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~G~~~-~~~~~G--HgiG~~~~e~p~~~~~~~~~~~~~le~ 185 (238)
T cd01086 109 EAKKLVEVTEEALYKGIEAVKPGNRIGDIGHAIEKYAEKNGYSV-VREFGG--HGIGRKFHEEPQIPNYGRPGTGPKLKP 185 (238)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcce-ecCccc--cCCCCccccCCCcCCccCCCCCCEecC
Confidence 46788899999999999999999999999999999999998754 222222 2222222211 11 2223 3678999
Q ss_pred CCeEEEEeeEEE
Q 026256 194 GDTINIDVTVYL 205 (241)
Q Consensus 194 GDiV~IDvg~~~ 205 (241)
|+++.++.+.+.
T Consensus 186 Gmv~~iep~i~~ 197 (238)
T cd01086 186 GMVFTIEPMINL 197 (238)
T ss_pred CCEEEEeeEEEC
Confidence 999999998875
No 45
>PRK09795 aminopeptidase; Provisional
Probab=97.61 E-value=0.00059 Score=63.63 Aligned_cols=104 Identities=17% Similarity=0.164 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCC-CCCcc
Q 026256 113 EKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRAL 191 (241)
Q Consensus 113 ~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P-~~r~L 191 (241)
+++-+.++++.+++.++.+++.+++|||++-.||++++++.+.++|....+.+ +..+.+.....+. |.-.| ++.+|
T Consensus 236 ~~~~~~~~~~~~~v~~a~~~~~~~~rpG~~~~~v~~~~~~~~~~~g~~~~~~h--~~GHgiGl~~he~-p~i~~~~~~~l 312 (361)
T PRK09795 236 SAESHPLFNVYQIVLQAQLAAISAIRPGVRCQQVDDAARRVITEAGYGDYFGH--NTGHAIGIEVHED-PRFSPRDTTTL 312 (361)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCCccCCC--CCCccCCccccCC-CCcCCCCCCCc
Confidence 55555688999999999999999999999999999999999999886542111 1222222222221 11112 46789
Q ss_pred CCCCeEEEEeeEEEcCcCCCcE-EEceEeeeecC
Q 026256 192 EDGDTINIDVTVYLNQMIEPGF-WGASGSLPLPP 224 (241)
Q Consensus 192 q~GDiV~IDvg~~~~~~~~~GY-~~D~tRT~~vG 224 (241)
++|.++.|+.+.+.. |+ -.-+.-|++|.
T Consensus 313 ~~gmv~~iEpgiy~~-----~~~gvriEd~v~vt 341 (361)
T PRK09795 313 QPGMLLTVEPGIYLP-----GQGGVRIEDVVLVT 341 (361)
T ss_pred CCCCEEEECCEEEeC-----CCCEEEEeeEEEEC
Confidence 999999999999986 43 34567888886
No 46
>PRK14576 putative endopeptidase; Provisional
Probab=97.59 E-value=0.00087 Score=63.83 Aligned_cols=100 Identities=12% Similarity=0.028 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceee--ecCCCcccccCC-CCCccCC
Q 026256 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICHGIP-DSRALED 193 (241)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~--tg~N~~i~Hg~P-~~r~Lq~ 193 (241)
+..+++.+++.++++++.+++|||++..||++++.+.+.+.|....+.++ +.+.++ .|..+. +.-.+ ++.+|++
T Consensus 284 ~~~~~~~~~~~~a~~a~~~~~rPG~~~~dv~~a~~~~~~~~G~~~~~~~~--~GHgiG~~l~~~e~-P~i~~~~~~~Le~ 360 (405)
T PRK14576 284 KLTQQIYDTIRTGHEHMLSMVAPGVKLKAVFDSTMAVIKTSGLPHYNRGH--LGHGDGVFLGLEEV-PFVSTQATETFCP 360 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCccccCCC--CCCCCCCCCCcCcC-CCcCCCCCCccCC
Confidence 35678888999999999999999999999999999999999875432222 223333 344432 22122 4678999
Q ss_pred CCeEEEEeeEEEcCcCCCc-EEEceEeeeecC
Q 026256 194 GDTINIDVTVYLNQMIEPG-FWGASGSLPLPP 224 (241)
Q Consensus 194 GDiV~IDvg~~~~~~~~~G-Y~~D~tRT~~vG 224 (241)
|..+.++.+.+.. | .-.-+..|++|.
T Consensus 361 GMv~~vEp~~y~~-----g~ggvriEDtvlVT 387 (405)
T PRK14576 361 GMVLSLETPYYGI-----GVGSIMLEDMILIT 387 (405)
T ss_pred CCEEEECCceeec-----CCCEEEEeeEEEEC
Confidence 9999999877764 3 234478899986
No 47
>TIGR02993 ectoine_eutD ectoine utilization protein EutD. Members of this family are putative peptidases or hydrolases similar to Xaa-Pro aminopeptidase (pfam00557). They belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. The exact function is unknown.
Probab=97.58 E-value=0.00073 Score=63.93 Aligned_cols=97 Identities=15% Similarity=0.106 Sum_probs=72.0
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccc-----CC-CCCcc
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG-----IP-DSRAL 191 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg-----~P-~~r~L 191 (241)
.++++.+++.++++++.+++|||+|..||++++.+.+.++|... . +.....+..+... .+|. .| ++.+|
T Consensus 271 ~~~~~~~~~~~a~~~~i~~ikpG~~~~dv~~~~~~~~~~~G~~~--~--h~~GhgiGl~~~~-~~~e~~~~l~~~~~~~L 345 (391)
T TIGR02993 271 AFLDAEKAVLEGMEAGLEAAKPGNTCEDIANAFFAVLKKYGIHK--D--SRTGYPIGLSYPP-DWGERTMSLRPGDNTVL 345 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHcCCcc--C--CCceeeeccCcCC-CCCCccccccCCCCcee
Confidence 57788899999999999999999999999999999999988653 1 1122222222111 1111 12 36789
Q ss_pred CCCCeEEEEeeEEEcCcCCCcEEEceEeeeecC
Q 026256 192 EDGDTINIDVTVYLNQMIEPGFWGASGSLPLPP 224 (241)
Q Consensus 192 q~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG 224 (241)
++|.++.|+.+.+.. |+-.-+.-|++|.
T Consensus 346 ~~GMv~tvEpgiy~~-----~~Gvried~v~VT 373 (391)
T TIGR02993 346 KPGMTFHFMTGLWME-----DWGLEITESILIT 373 (391)
T ss_pred cCCCEEEEcceeEeC-----CCCeEEeeEEEEC
Confidence 999999999999987 6666788899996
No 48
>TIGR00500 met_pdase_I methionine aminopeptidase, type I. Methionine aminopeptidase is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. This model describes type I. The role of this protein in general is to produce the mature form of cytosolic proteins by removing the N-terminal methionine.
Probab=97.57 E-value=0.0012 Score=58.14 Aligned_cols=104 Identities=15% Similarity=0.041 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCc--cccc--CCCCCccCC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG--IPDSRALED 193 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~--i~Hg--~P~~r~Lq~ 193 (241)
.+|++.+++.++++++.+++|||++..||+.++.+.+.++|.... .+| +...++....+. ++.. ..++.+|++
T Consensus 117 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~g~~~~-~~~--~GHgiG~~~~e~p~i~~~~~~~~~~~l~~ 193 (247)
T TIGR00500 117 EAEKLLECTEESLYKAIEEAKPGNRIGEIGAAIQKYAEAKGFSVV-REY--CGHGIGRKFHEEPQIPNYGKKFTNVRLKE 193 (247)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEec-cCc--cCCccCcccCCCCccCCcCcCCCCCEecC
Confidence 467788889999999999999999999999999999999987642 222 223333333322 1111 123678999
Q ss_pred CCeEEEEeeEEEcCc-------------CCCcEEEceEeeeecC
Q 026256 194 GDTINIDVTVYLNQM-------------IEPGFWGASGSLPLPP 224 (241)
Q Consensus 194 GDiV~IDvg~~~~~~-------------~~~GY~~D~tRT~~vG 224 (241)
|+++.|+.+.+...+ -+.++..-+..|++|.
T Consensus 194 gmv~~iEp~i~~~~~~~~~~~~~~~~~~~~~~~g~ried~v~Vt 237 (247)
T TIGR00500 194 GMVFTIEPMVNTGTEEITTAADGWTVKTKDGSLSAQFEHTIVIT 237 (247)
T ss_pred CCEEEEeeEEEcCCCcEEECCCCCEEEccCCCeEEEEeEEEEEc
Confidence 999999988876200 0013445567788886
No 49
>PRK08671 methionine aminopeptidase; Provisional
Probab=97.41 E-value=0.0014 Score=59.78 Aligned_cols=96 Identities=20% Similarity=0.192 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccC--------CCCC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI--------PDSR 189 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~--------P~~r 189 (241)
..+++.+.+.++++.+.+.++||++..||++.+++.+.+.|..+. .+..+ .. .|.+ ..|+. .++.
T Consensus 102 ~~~~l~~a~~~a~~aai~~ikpG~~~~dv~~~i~~vi~~~G~~~~-~~~~G--Hg--iG~~--~~he~p~ip~~~~~~~~ 174 (291)
T PRK08671 102 KYEDLVEASEEALEAAIEVVRPGVSVGEIGRVIEETIRSYGFKPI-RNLTG--HG--LERY--ELHAGPSIPNYDEGGGV 174 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccc-CCCcc--cC--cCCC--cccCCCccCccCCCCCc
Confidence 457788888999999999999999999999999999999998662 22211 11 2211 23322 2367
Q ss_pred ccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecC
Q 026256 190 ALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPP 224 (241)
Q Consensus 190 ~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG 224 (241)
+|++|+++.||....-. .|+..|..+|-+..
T Consensus 175 ~le~GmV~aIEp~~t~G----~G~v~~~~~~~iy~ 205 (291)
T PRK08671 175 KLEEGDVYAIEPFATDG----EGKVVEGPEVEIYS 205 (291)
T ss_pred eeCCCCEEEEcceEECC----CCeEecCCceEEEe
Confidence 89999999999877653 28888877777664
No 50
>cd01091 CDC68-like Related to aminopeptidase P and aminopeptidase M, a member of this domain family is present in cell division control protein 68, a transcription factor.
Probab=97.36 E-value=0.0017 Score=57.87 Aligned_cols=107 Identities=12% Similarity=0.021 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCC-CCCccCCCC
Q 026256 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIP-DSRALEDGD 195 (241)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P-~~r~Lq~GD 195 (241)
+..|++.+++.++.+++.+++|||++-.||++.+.+.+.+.|..-...-.++....++....+.-..-.+ ++++|++|.
T Consensus 119 ~~~~~~y~~~~~a~~~~i~~lkpG~~~~dv~~~a~~~i~~~~~~~~~~~~~~~GHgiGle~hE~~~~l~~~~~~~L~~GM 198 (243)
T cd01091 119 SEQQKNYNFLLALQEEILKELKPGAKLSDVYQKTLDYIKKKKPELEPNFTKNLGFGIGLEFRESSLIINAKNDRKLKKGM 198 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHhChhHHHhCcCCcccccCcccccCccccCCCCCCCcCCCC
Confidence 4577889999999999999999999999999999999988762211000011222333333332111112 467899999
Q ss_pred eEEEEeeEE-EcCc------CCCcEEEceEeeeecC
Q 026256 196 TINIDVTVY-LNQM------IEPGFWGASGSLPLPP 224 (241)
Q Consensus 196 iV~IDvg~~-~~~~------~~~GY~~D~tRT~~vG 224 (241)
++.|..|.+ +. . ....|---++-|++|.
T Consensus 199 vf~vepGi~~~~-~~~~~~~~~~~~gv~ieDtV~Vt 233 (243)
T cd01091 199 VFNLSIGFSNLQ-NPEPKDKESKTYALLLSDTILVT 233 (243)
T ss_pred EEEEeCCccccc-CccccCccCCeeEEEEEEEEEEc
Confidence 999999987 32 0 0014667789999997
No 51
>cd01087 Prolidase Prolidase. E.C. 3.4.13.9. Also known as Xaa-Pro dipeptidase, X-Pro dipeptidase, proline dipeptidase., imidodipeptidase, peptidase D, gamma-peptidase. Catalyses hydrolysis of Xaa-Pro dipeptides; also acts on aminoacyl-hydroxyproline analogs. No action on Pro-Pro.
Probab=97.35 E-value=0.0024 Score=56.01 Aligned_cols=101 Identities=17% Similarity=0.116 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCC----CCC----------CCCC--CCCCceeeecCCCcc
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA----YPS----------PLGY--GGFPKSVCTSVNECI 181 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga----~ps----------plgY--~~Fp~~V~tg~N~~i 181 (241)
..++..+.+.++++.+.+.++||++..||++++.+.+.+++. .+. ...| +++...+.....+.
T Consensus 104 ~~~~~~~~~~~a~~~~i~~~rpG~~~~~v~~a~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~h~~GhgiGl~~~e~- 182 (243)
T cd01087 104 EQRELYEAVLAAQKAAIAACKPGVSYEDIHLLAHRVLAEGLKELGILKGDVDEIVESGAYAKFFPHGLGHYLGLDVHDV- 182 (243)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcCcccCchHhhhhhhhhhhhcCCCCccccCcccccC-
Confidence 567788899999999999999999999999999998876532 110 0011 12223333333332
Q ss_pred ccc--CC-CCCccCCCCeEEEEeeEEEcCcCCCc-----------EEEceEeeeecC
Q 026256 182 CHG--IP-DSRALEDGDTINIDVTVYLNQMIEPG-----------FWGASGSLPLPP 224 (241)
Q Consensus 182 ~Hg--~P-~~r~Lq~GDiV~IDvg~~~~~~~~~G-----------Y~~D~tRT~~vG 224 (241)
++. .+ ++.+|++|..+.|+.+.+.. | +-.-+.-|++|.
T Consensus 183 p~~~~~~~~~~~l~~GMv~~iEp~iy~~-----~~~~~~~~~~~~~g~~ied~v~Vt 234 (243)
T cd01087 183 GGYLRYLRRARPLEPGMVITIEPGIYFI-----PDLLDVPEYFRGGGIRIEDDVLVT 234 (243)
T ss_pred ccccccCCCCCCCCCCCEEEECCEEEeC-----CcccccccccceeEEEeeeEEEEc
Confidence 221 23 46789999999999999876 4 455678888886
No 52
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=97.32 E-value=0.0015 Score=59.53 Aligned_cols=96 Identities=20% Similarity=0.167 Sum_probs=70.1
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccC--------CCCC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI--------PDSR 189 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~--------P~~r 189 (241)
..++..+.+.++++++.++++||++..||++++++.+.++|..+. .++.++ . .|. ...|+. .++.
T Consensus 101 ~~~~l~ea~~~A~~~ai~~ikPG~~~~dV~~ai~~~i~~~G~~~~-~~~~GH--g--ig~--~~~h~~~~ip~~~~~~~~ 173 (291)
T cd01088 101 KYDDLLEAAKEALNAAIKEAGPDVRLGEIGEAIEEVIESYGFKPI-RNLTGH--S--IER--YRLHAGKSIPNVKGGEGT 173 (291)
T ss_pred hHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCEEe-ecCCcc--C--ccC--ccccCCCccCccCCCCCC
Confidence 566788899999999999999999999999999999999998762 222111 1 221 122321 2357
Q ss_pred ccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecC
Q 026256 190 ALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPP 224 (241)
Q Consensus 190 ~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG 224 (241)
+|++|+++.||...... .|+..|-.+|-+..
T Consensus 174 ~le~gmV~aIEp~~s~G----~G~v~~~~~~~iy~ 204 (291)
T cd01088 174 RLEEGDVYAIEPFATTG----KGYVHDGPECSIYM 204 (291)
T ss_pred EeCCCCEEEEceeEECC----CCeeecCCceEEEE
Confidence 89999999999877654 27877766666654
No 53
>PRK12318 methionine aminopeptidase; Provisional
Probab=97.32 E-value=0.0028 Score=58.00 Aligned_cols=86 Identities=17% Similarity=0.182 Sum_probs=61.9
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCc--ccccCC-CCCccCCC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGIP-DSRALEDG 194 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~--i~Hg~P-~~r~Lq~G 194 (241)
.+|++.+++.++++++.++++||++..||+.++.+.+.++|.... ..+ ....+.....+. +.+..+ ++.+|++|
T Consensus 159 ~~~~~~~~~~~a~~~~i~~~rpG~~~~dv~~a~~~~~~~~G~~~~-~~~--~GHgIGl~~hE~P~i~~~~~~~~~~L~~G 235 (291)
T PRK12318 159 IKKKVCQASLECLNAAIAILKPGIPLYEIGEVIENCADKYGFSVV-DQF--VGHGVGIKFHENPYVPHHRNSSKIPLAPG 235 (291)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCccC-CCc--ccCCcCccccCCCcccCcCCCCCCEeCCC
Confidence 467889999999999999999999999999999999999987531 112 122333333322 112112 34679999
Q ss_pred CeEEEEeeEEEc
Q 026256 195 DTINIDVTVYLN 206 (241)
Q Consensus 195 DiV~IDvg~~~~ 206 (241)
+++.|+.+.+..
T Consensus 236 MV~~iEP~i~~~ 247 (291)
T PRK12318 236 MIFTIEPMINVG 247 (291)
T ss_pred CEEEECCEEEcC
Confidence 999999888764
No 54
>PRK12897 methionine aminopeptidase; Reviewed
Probab=97.29 E-value=0.0028 Score=56.14 Aligned_cols=104 Identities=14% Similarity=0.065 Sum_probs=70.0
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCc--ccccC-C-CCCccCC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHGI-P-DSRALED 193 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~--i~Hg~-P-~~r~Lq~ 193 (241)
..|++.+++.++++.+.++++||++..||++++.+.+.+.|.... .+| ....+.....+. +.+.. + +..+|++
T Consensus 118 ~~~~~~~~~~~a~~~~i~~~kpG~~~~dv~~a~~~~~~~~g~~~~-~~~--~GHgiGl~~hE~P~i~~~~~~~~~~~l~~ 194 (248)
T PRK12897 118 EAEKLLLVAENALYKGIDQAVIGNRVGDIGYAIESYVANEGFSVA-RDF--TGHGIGKEIHEEPAIFHFGKQGQGPELQE 194 (248)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccchHHHHHHHHHHHcCCccC-CCe--EECccCCcccCCCccCCCCCCCCCCCcCC
Confidence 466777899999999999999999999999999999999886532 222 122333333322 12211 2 3458999
Q ss_pred CCeEEEEeeEEEcC--------cC----CCc-EEEceEeeeecC
Q 026256 194 GDTINIDVTVYLNQ--------MI----EPG-FWGASGSLPLPP 224 (241)
Q Consensus 194 GDiV~IDvg~~~~~--------~~----~~G-Y~~D~tRT~~vG 224 (241)
|+++.+..+.+... ++ ..| +-.-++.|++|.
T Consensus 195 Gmv~tiEP~~~~~~~~~~~~~~~~~~~~~~g~~g~r~edtv~Vt 238 (248)
T PRK12897 195 GMVITIEPIVNVGMRYSKVDLNGWTARTMDGKLSAQYEHTIAIT 238 (248)
T ss_pred CCEEEECCeEecCCCceEECCCCcEEEcCCCCeEeecceEEEEe
Confidence 99999998887310 00 003 456777888886
No 55
>PF00557 Peptidase_M24: Metallopeptidase family M24 This Prosite entry corresponds to sub-family M24B This Prosite entry corresponds to sub-families M24A and M24C; InterPro: IPR000994 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This entry contains proteins that belong to MEROPS peptidase family M24 (clan MG), which share a common structural-fold, the "pita-bread" fold. The fold contains both alpha helices and an anti-parallel beta sheet within two structurally similar domains that are thought to be derived from an ancient gene duplication. The active site, where conserved, is located between the two domains. The fold is common to methionine aminopeptidase (3.4.11.18 from EC), aminopeptidase P (3.4.11.9 from EC), prolidase (3.4.13.9 from EC), agropine synthase and creatinase (3.5.3.3 from EC). Though many of these peptidases require a divalent cation, creatinase is not a metal-dependent enzyme [, , ]. The entry also contains proteins that have lost catalytic activity, for example Spt16, which is a component of the FACT complex. The crystal structure of the N-terminal domain of Spt16, determined to 2.1A, reveals an aminopeptidase P fold whose enzymatic activity has been lost. This fold binds directly to histones H3-H4 through a interaction with their globular core domains, as well as with their N-terminal tails []. The FACT complex is a stable heterodimer in Saccharomyces cerevisiae (Baker's yeast) comprising Spt16p (P32558 from SWISSPROT, IPR013953 from INTERPRO) and Pob3p (Q04636 from SWISSPROT, IPR000969 from INTERPRO). The complex plays a role in transcription initiation and promotes binding of TATA-binding protein (TBP) to a TATA box in chromatin []; it also facilitates RNA Polymerase II transcription elongation through nucleosomes by destabilising and then reassembling nucleosome structure [, , ]. ; GO: 0009987 cellular process; PDB: 4A6V_B 4A6W_A 3CTZ_A 3IG4_B 2B3H_A 2NQ6_A 2NQ7_A 2GZ5_A 2G6P_A 2B3L_A ....
Probab=97.29 E-value=0.0018 Score=54.95 Aligned_cols=98 Identities=24% Similarity=0.317 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCC-CCCCCCCCCCCceeeecCCCcccccC-C-CCCccCCCC
Q 026256 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA-YPSPLGYGGFPKSVCTSVNECICHGI-P-DSRALEDGD 195 (241)
Q Consensus 119 mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga-~psplgY~~Fp~~V~tg~N~~i~Hg~-P-~~r~Lq~GD 195 (241)
.+++.+.+.++++.+.+.++||+|..||.+++++.+.++|. .+.+ ..+..++.....+..|.-. + ++.+|++|.
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~pG~~~~~v~~~~~~~~~~~g~~~~~~---~~~GH~iG~~~~~~~P~i~~~~~~~~l~~gm 180 (207)
T PF00557_consen 104 QRRAYEAAREALEAAIEALRPGVTGSDVYEAVREVLEEYGLEEPYP---HGLGHGIGLEFHEPGPNIARPGDDTVLEPGM 180 (207)
T ss_dssp HHHHHHHHHHHHHHHHHH-STTSBHHHHHHHHHHHHHHTTEGEEBT---SSSEEEESSSSSEEEEEESSTTTSSB--TTB
T ss_pred ccchhhhhHHHHHhHhhhcccccccchhhHHHHHHHHhhcccceee---ecccccccccccccceeeecccccceecCCC
Confidence 78888899999999999999999999999999999999987 2211 1122333222221112211 2 577999999
Q ss_pred eEEEEeeEE-EcCcCCCcE-EEceEeeeecC
Q 026256 196 TINIDVTVY-LNQMIEPGF-WGASGSLPLPP 224 (241)
Q Consensus 196 iV~IDvg~~-~~~~~~~GY-~~D~tRT~~vG 224 (241)
++.++.+.. .. |+ -.-+.-|++|.
T Consensus 181 v~~iep~~~~~~-----~~~g~~~ed~v~Vt 206 (207)
T PF00557_consen 181 VFAIEPGLYFIP-----GWGGVRFEDTVLVT 206 (207)
T ss_dssp EEEEEEEEEEET-----TSEEEEEBEEEEEE
T ss_pred ceeEeeeEEccC-----CCcEEEEEEEEEEC
Confidence 999999887 43 43 55566666653
No 56
>PRK12896 methionine aminopeptidase; Reviewed
Probab=97.24 E-value=0.0037 Score=55.00 Aligned_cols=104 Identities=20% Similarity=0.173 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCc---ccc-cCC-CCCccC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC---ICH-GIP-DSRALE 192 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~---i~H-g~P-~~r~Lq 192 (241)
..+++.+.+.++++++.++++||++..||.+.+.+.+.++|... ..++.+ +.+.....+. +.+ ..| ++.+|+
T Consensus 124 ~~~~~~~~~~~a~~~~~~~~kpG~~~~~v~~~~~~~~~~~G~~~-~~~~~G--HgiG~~~he~p~~~~~~~~~~~~~~le 200 (255)
T PRK12896 124 EAEKLCRVAEEALWAGIKQVKAGRPLNDIGRAIEDFAKKNGYSV-VRDLTG--HGVGRSLHEEPSVILTYTDPLPNRLLR 200 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCEe-ccCccc--CCcCcccccCCCccccCCCCCCCCEec
Confidence 35677888889999999999999999999999999999998743 122222 2222222221 111 113 367899
Q ss_pred CCCeEEEEeeEEEcCc-------------CCCcEEEceEeeeecC
Q 026256 193 DGDTINIDVTVYLNQM-------------IEPGFWGASGSLPLPP 224 (241)
Q Consensus 193 ~GDiV~IDvg~~~~~~-------------~~~GY~~D~tRT~~vG 224 (241)
+|+++.|+.+.+.... .+.++..-+.-|++|.
T Consensus 201 ~GmV~~iEp~i~~g~~~~~~~~~~~~~~~~~~~~~~~~edtv~vt 245 (255)
T PRK12896 201 PGMTLAVEPFLNLGAKDAETLDDGWTVVTPDKSLSAQFEHTVVVT 245 (255)
T ss_pred CCcEEEEeceEEcCCCceEEcCCCCEEEecCCCeEEEEEEEEEEc
Confidence 9999999987763100 0113445588888887
No 57
>cd01089 PA2G4-like Related to aminopepdidase M, this family contains proliferation-associated protein 2G4. Family members have been implicated in cell cycle control.
Probab=97.16 E-value=0.0044 Score=54.16 Aligned_cols=98 Identities=18% Similarity=0.145 Sum_probs=72.8
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCC--CCCCceeeecCCCcccccCCCCCccCCC
Q 026256 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY--GGFPKSVCTSVNECICHGIPDSRALEDG 194 (241)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY--~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~G 194 (241)
...+++.+.+.++++++.+++|||++-.||+.++.+.+.+.|+.+.. +| +++...+.++.+... -..+|++|
T Consensus 120 ~~~~~~~~~~~ea~~~~~~~~kpG~~~~dv~~a~~~~~~~~G~~~~~-~~~~h~~g~~~~~~~~~~~-----~~~~l~~g 193 (228)
T cd01089 120 GKKADVIAAAHYALEAALRLLRPGNQNSDITEAIQKVIVDYGCTPVE-GVLSHQLKRVVSSGEGKAK-----LVECVKHG 193 (228)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCEEec-CccccCcCceEecCCCCcc-----chhhccCC
Confidence 46788899999999999999999999999999999999999953210 11 112223333322110 14679999
Q ss_pred CeEEEEeeEEEcCcCCCcEEEceEeeeecC
Q 026256 195 DTINIDVTVYLNQMIEPGFWGASGSLPLPP 224 (241)
Q Consensus 195 DiV~IDvg~~~~~~~~~GY~~D~tRT~~vG 224 (241)
.++.++...+.+ +.+-.-+.-|++|.
T Consensus 194 mvf~~ep~~~~~----g~~~~~~~~Tv~vt 219 (228)
T cd01089 194 LLFPYPVLYEKE----GEVVAQFKLTVLLT 219 (228)
T ss_pred cccccceeEccC----CCeEEEEEEEEEEc
Confidence 999999999886 14778999999997
No 58
>TIGR00501 met_pdase_II methionine aminopeptidase, type II. Methionine aminopeptidase (map) is a cobalt-binding enzyme. Bacterial and organellar examples (type I) differ from eukaroytic and archaeal (type II) examples in lacking a region of approximately 60 amino acids between the 4th and 5th cobalt-binding ligands. The role of this protein in general is to produce the mature amino end of cytosolic proteins by removing the N-terminal methionine. This model describes type II, among which the eukaryotic members typically have an N-terminal extension not present in archaeal members. It can act cotranslationally. The enzyme from rat has been shown to associate with translation initiation factor 2 (IF-2) and may have a role in translational regulation.
Probab=97.14 E-value=0.0029 Score=57.97 Aligned_cols=94 Identities=24% Similarity=0.345 Sum_probs=68.9
Q ss_pred HHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccc---C-----CCCCc
Q 026256 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG---I-----PDSRA 190 (241)
Q Consensus 119 mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg---~-----P~~r~ 190 (241)
.++..+.+.++++++.++++||++..||++++++.+.+.|..+. .++.++. + |. ...|+ + .++.+
T Consensus 106 ~~~l~~a~~~A~~aai~~~kPGv~~~dV~~ai~~vi~~~G~~~i-~~~~GHg--i--g~--~~~h~g~~ip~i~~~~~~~ 178 (295)
T TIGR00501 106 YDNLVKAAKDALYTAIKEIRAGVRVGEIGKAIQEVIESYGVKPI-SNLTGHS--M--AP--YRLHGGKSIPNVKERDTTK 178 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCeee-cCCCCcc--e--ec--ccccCCCccCeecCCCCCE
Confidence 47788889999999999999999999999999999999998762 2332221 1 11 12332 1 23568
Q ss_pred cCCCCeEEEEeeEEEcCcCCCcEEEceEeeeec
Q 026256 191 LEDGDTINIDVTVYLNQMIEPGFWGASGSLPLP 223 (241)
Q Consensus 191 Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~v 223 (241)
|++|+++.||...... .|+..|..+|-+.
T Consensus 179 le~GmV~aIEP~~~~G----~G~v~~~~~~~iy 207 (295)
T TIGR00501 179 LEEGDVVAIEPFATDG----VGYVTDGGEVSIY 207 (295)
T ss_pred eCCCCEEEEceeEECC----cCeEecCCCeEEE
Confidence 9999999999877654 2788777766544
No 59
>PRK07281 methionine aminopeptidase; Reviewed
Probab=97.13 E-value=0.0044 Score=56.74 Aligned_cols=85 Identities=11% Similarity=0.060 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCc--cccc-CC-CCCccCC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNEC--ICHG-IP-DSRALED 193 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~--i~Hg-~P-~~r~Lq~ 193 (241)
..|++.+++.++++++.+.+|||++..||++++.+.+.++|... ..++ ....|.....+. +++. .+ .+.+|++
T Consensus 149 ~~~~l~~~~~ea~~~ai~~~kpG~~~~di~~a~~~~~~~~G~~~-~~~~--~GHGIGl~~hE~P~i~~~~~~~~~~~Le~ 225 (286)
T PRK07281 149 EVKNLMDVTKEAMYRGIEQAVVGNRIGDIGAAIQEYAESRGYGV-VRDL--VGHGVGPTMHEEPMVPNYGTAGRGLRLRE 225 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcc-CCCe--eeeeCCCccCCCCcCCCcccCCCCCEECC
Confidence 46789999999999999999999999999999999998887643 1121 112222222221 1221 12 3567999
Q ss_pred CCeEEEEeeEEE
Q 026256 194 GDTINIDVTVYL 205 (241)
Q Consensus 194 GDiV~IDvg~~~ 205 (241)
|+++.|+.+.+.
T Consensus 226 GMV~tiEPgiy~ 237 (286)
T PRK07281 226 GMVLTIEPMINT 237 (286)
T ss_pred CCEEEECCeeEc
Confidence 999999999876
No 60
>COG0006 PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=97.13 E-value=0.0049 Score=57.93 Aligned_cols=110 Identities=22% Similarity=0.164 Sum_probs=78.0
Q ss_pred CcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccc
Q 026256 104 IVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICH 183 (241)
Q Consensus 104 ~~~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~H 183 (241)
+.+.-.+..+.+ ..|+..+++.++++++.++++||++-.||++++++.+.+.|....+. ++..+.++ ...-.|
T Consensus 251 iTRT~~~G~~~~--~~~~iy~~V~~aq~aa~~~~rpG~~~~~vd~~ar~~i~~~g~~~~~~--h~~GHgvG---~~l~vh 323 (384)
T COG0006 251 ITRTFPIGKPSD--EQREIYEAVLEAQEAAIAAIRPGVTGGEVDAAARQVLEKAGYGLYFL--HGTGHGVG---FVLDVH 323 (384)
T ss_pred ceeEEecCCCCH--HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHhcCCccccc--CCccccCC---CCcccC
Confidence 333344553322 45688899999999999999999999999999999999976543211 12223322 111233
Q ss_pred cCC------CCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecC
Q 026256 184 GIP------DSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPP 224 (241)
Q Consensus 184 g~P------~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG 224 (241)
-.| ++.+|++|.++.++.+.++. .++-.-+..+++|.
T Consensus 324 E~p~~~~~~~~~~L~~GMv~t~Epg~y~~----g~~GirIEd~vlVt 366 (384)
T COG0006 324 EHPQYLSPGSDTTLEPGMVFSIEPGIYIP----GGGGVRIEDTVLVT 366 (384)
T ss_pred cCccccCCCCCccccCCcEEEeccccccC----CCceEEEEEEEEEc
Confidence 333 46789999999999998875 15778899999997
No 61
>PLN03158 methionine aminopeptidase; Provisional
Probab=96.96 E-value=0.0084 Score=57.40 Aligned_cols=85 Identities=19% Similarity=0.243 Sum_probs=60.9
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCC--cccccCCC--CCccCC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE--CICHGIPD--SRALED 193 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~--~i~Hg~P~--~r~Lq~ 193 (241)
..|+..+.+.++++++.+++|||++-.||.+++.+.+.++|... ..+|.+ ..|+....+ .++|+..+ ..+|++
T Consensus 251 e~~~l~e~~~eal~~aI~~vkPGv~~~dI~~~i~~~~~~~G~~~-v~~~~G--HGIG~~~He~P~i~~~~~~~~~~~l~~ 327 (396)
T PLN03158 251 ASRQLVKCTYECLEKAIAIVKPGVRYREVGEVINRHATMSGLSV-VKSYCG--HGIGELFHCAPNIPHYARNKAVGVMKA 327 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHcCCCc-cCCccC--CccccccCCCCCCCcccCCCCCCEecC
Confidence 35778889999999999999999999999999999999988653 122222 222222222 23453222 368999
Q ss_pred CCeEEEEeeEEE
Q 026256 194 GDTINIDVTVYL 205 (241)
Q Consensus 194 GDiV~IDvg~~~ 205 (241)
|+++.|+-+.+.
T Consensus 328 GMVfTIEP~i~~ 339 (396)
T PLN03158 328 GQVFTIEPMINA 339 (396)
T ss_pred CcEEEECCeecc
Confidence 999999988764
No 62
>PTZ00053 methionine aminopeptidase 2; Provisional
Probab=96.71 E-value=0.015 Score=56.85 Aligned_cols=102 Identities=12% Similarity=0.116 Sum_probs=70.3
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCC--CCCCCCCCCCceeeecCCCccccc---CC-----C
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAY--PSPLGYGGFPKSVCTSVNECICHG---IP-----D 187 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~--psplgY~~Fp~~V~tg~N~~i~Hg---~P-----~ 187 (241)
..++..+++.+|++++.++++||++..||++++++.+.+.|.. .-.+.+..+...++-|+.-...|+ +| +
T Consensus 264 ~~~~L~eAv~eA~~aaI~~~kpGv~~~dI~~AIqevies~G~e~~Gk~f~~k~I~nltGHgIG~y~iHe~k~iP~v~~~~ 343 (470)
T PTZ00053 264 KYDPLLQATKDATNTGIKEAGIDVRLSDIGAAIQEVIESYEVEIKGKTYPIKSIRNLNGHSIGPYIIHGGKSVPIVKGGE 343 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcccCcccccccccCCcccCCCCccccCCCcCCeeCCCC
Confidence 4677888999999999999999999999999999999999863 000000011122222333223454 33 3
Q ss_pred CCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeec
Q 026256 188 SRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLP 223 (241)
Q Consensus 188 ~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~v 223 (241)
..+|++|+++.|+..+... .||..|-.++-+.
T Consensus 344 ~~~LeeGmVfaIEPf~stG----~G~v~~~~~~siY 375 (470)
T PTZ00053 344 NTRMEEGELFAIETFASTG----RGYVNEDLECSHY 375 (470)
T ss_pred CCEecCCCEEEEcceeeCC----CCeEecCCCceee
Confidence 5689999999999888764 2888886555554
No 63
>TIGR00495 crvDNA_42K 42K curved DNA binding protein. Proteins identified by this model have been identified in a number of species as a nuclear (but not nucleolar) protein with a cell cycle dependence. Various names given to members of this family have included cell cycle protein p38-2G4, DNA-binding protein GBP16, and proliferation-associated protein 1. This protein is closely related to methionine aminopeptidase, a cobolt-binding protein.
Probab=96.63 E-value=0.017 Score=55.16 Aligned_cols=100 Identities=20% Similarity=0.206 Sum_probs=67.0
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCC--CCceeeecCCCcccccCC------CCC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGG--FPKSVCTSVNECICHGIP------DSR 189 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~--Fp~~V~tg~N~~i~Hg~P------~~r 189 (241)
..+++...+.++++.+.++++||++-.||+.++++.+.++|+.+. -||.+ ....+--|.-..+++..+ ++.
T Consensus 139 ~~~~l~~aa~~A~~aai~~vkPG~~~~dI~~ai~~v~~~~G~~~v-~~~~gH~igr~~~~g~~~Ii~~~~~~~~~~~~~~ 217 (389)
T TIGR00495 139 RKADVIAAAHLAAEAALRLVKPGNTNTQVTEAINKVAHSYGCTPV-EGMLSHQLKQHVIDGEKVIISNPSDSQKKDHDTA 217 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHcCCeec-CCceeecccceeccCCCeeeecCCccccCCCCCC
Confidence 466677888899999999999999999999999999999998763 22221 111111111122233221 245
Q ss_pred ccCCCCeEEEEeeEEEcCcCCCcEEEceE-eeee
Q 026256 190 ALEDGDTINIDVTVYLNQMIEPGFWGASG-SLPL 222 (241)
Q Consensus 190 ~Lq~GDiV~IDvg~~~~~~~~~GY~~D~t-RT~~ 222 (241)
.|++|++..||+.+... .|+.-+.. ||-+
T Consensus 218 ~le~gev~aIEp~vs~G----~g~v~~~~~~~ti 247 (389)
T TIGR00495 218 EFEENEVYAVDILVSTG----EGKAKDADQRTTI 247 (389)
T ss_pred EecCCCEEEEeeeecCC----CceEEECCCeeEE
Confidence 79999999999988864 15555544 3443
No 64
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=96.61 E-value=0.0034 Score=63.04 Aligned_cols=126 Identities=13% Similarity=0.112 Sum_probs=77.9
Q ss_pred CCcCCCCcCCHHHHHHHHHHHHHHHHHHHHHhHhc----CCC--CcHHHHHHHHHHHHHHc------CCCCCCCCCC---
Q 026256 103 GIVSGPEVHDEKGIECMRVSGRLAAQVLEYAGTLV----KPG--ITTDEIDKAVHQMIIDN------GAYPSPLGYG--- 167 (241)
Q Consensus 103 ~~~~~R~VKs~~EIe~mR~A~~ia~~~l~~a~~~I----kpG--vTe~EId~~v~~~i~~~------Ga~psplgY~--- 167 (241)
.+..+..+|+.+||+.+|.+.+.....|++..+.+ -.+ +|-..+...+...+-+- -..-+-+++.
T Consensus 163 gLsk~~~~KD~~E~an~~~ss~~s~~~M~~~~~em~~~~D~~~kit~~KlsD~mes~iddv~f~q~~s~~l~~~~~d~le 242 (1001)
T COG5406 163 GLSKMFLTKDAEEIANCRASSAASSVLMRYFVKEMEMLWDGAFKITHGKLSDLMESLIDDVEFFQTKSLKLGDIDLDQLE 242 (1001)
T ss_pred hhhHHhccccHHHHhhccccchHHHHHHHHHHHHHHHHHhhhhhhccchHHHHhhhhcchhhhhhhcCccccccchhhhh
Confidence 45678899999999999999999999888544321 111 23233333333222111 0000111110
Q ss_pred -CCCceeeecCCCc-ccccCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEceEeeeecCCCCCHHHHHHhh
Q 026256 168 -GFPKSVCTSVNEC-ICHGIPDSRALEDGDTINIDVTVYLNQMIEPGFWGASGSLPLPPCNVLHLALSLLR 236 (241)
Q Consensus 168 -~Fp~~V~tg~N~~-i~Hg~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG~e~s~e~~rL~e 236 (241)
-|.+++.+|..-- -+..+..++.| -||.|..-+|.+|+ ||++.++|||++. |+.||++-|+
T Consensus 243 w~ytpiiqsg~~~Dl~psa~s~~~~l-~gd~vl~s~GiRYn-----~YCSn~~RT~l~d--p~~e~~~Ny~ 305 (1001)
T COG5406 243 WCYTPIIQSGGSIDLTPSAFSFPMEL-TGDVVLLSIGIRYN-----GYCSNMSRTILTD--PDSEQQKNYE 305 (1001)
T ss_pred hhcchhhccCceeecccccccCchhh-cCceEEEEeeeeec-----cccccccceEEeC--CchHhhhhHH
Confidence 1455666654321 12223334444 48899999999999 9999999999997 8888887665
No 65
>PRK10879 proline aminopeptidase P II; Provisional
Probab=96.59 E-value=0.029 Score=54.17 Aligned_cols=106 Identities=17% Similarity=0.166 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHH----HcCCCCC-------CCCCC-CCCceeeecCCCcccccC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII----DNGAYPS-------PLGYG-GFPKSVCTSVNECICHGI 185 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~----~~Ga~ps-------plgY~-~Fp~~V~tg~N~~i~Hg~ 185 (241)
..|++.+++.++++++.+++|||++-.||..++.+.+. +.|.-+. ..+|. .|++.++-+.. ...|..
T Consensus 283 ~q~~~y~~vl~a~~aai~~~kpG~~~~~v~~~~~~~~~~~l~~~Gl~~~~~~~~~~~~~~~~~~~Hg~GH~iG-ldvHd~ 361 (438)
T PRK10879 283 AQREIYDIVLESLETSLRLYRPGTSIREVTGEVVRIMVSGLVKLGILKGDVDQLIAENAHRPFFMHGLSHWLG-LDVHDV 361 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHhCCcCCCHHHHHHhccCccccCCCCccccC-cCcCcC
Confidence 35677888999999999999999999999998876544 3333110 00111 13333322221 112322
Q ss_pred C-----CCCccCCCCeEEEEeeEEEcCc-----CCCcEEEceEeeeecC
Q 026256 186 P-----DSRALEDGDTINIDVTVYLNQM-----IEPGFWGASGSLPLPP 224 (241)
Q Consensus 186 P-----~~r~Lq~GDiV~IDvg~~~~~~-----~~~GY~~D~tRT~~vG 224 (241)
| ++++|++|.++.|+.+.+..+. ...|+-.-+.-|++|.
T Consensus 362 ~~~~~~~~~~L~~GmV~tvEPgiY~~~~~~~~~~~~~~GiRiED~VlVT 410 (438)
T PRK10879 362 GVYGQDRSRILEPGMVLTVEPGLYIAPDADVPEQYRGIGIRIEDDIVIT 410 (438)
T ss_pred CCcCCCCCCcCCCCCEEEECCEEEECCCcCcccccCccEEEeccEEEEC
Confidence 2 3678999999999999987410 0013455677888886
No 66
>COG0024 Map Methionine aminopeptidase [Translation, ribosomal structure and biogenesis]
Probab=96.31 E-value=0.052 Score=49.22 Aligned_cols=89 Identities=16% Similarity=0.096 Sum_probs=62.9
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccc-CCC-CCccCCC
Q 026256 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG-IPD-SRALEDG 194 (241)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg-~P~-~r~Lq~G 194 (241)
+..++.++.+.++|..+.+.++||++..||-+++++.+..+|..+. -+|.|..-.--.=..-.++|+ .+. ..+|++|
T Consensus 120 ~~~~~L~~~t~eal~~~I~~vkpG~~l~~Ig~aIq~~~~~~G~~vV-r~~~GHgig~~~He~p~ip~y~~~~~~~~l~~G 198 (255)
T COG0024 120 EDAKRLLEATKEALYAGIEAVKPGARLGDIGRAIQEYAESRGFSVV-RNLTGHGIGRELHEEPSIPNYGKDGTGVRLKEG 198 (255)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHcCCEEe-ecccCCccCcccCCCCeeccccCCCCCcccCCC
Confidence 4566778899999999999999999999999999999998887652 344432110000011224553 222 3589999
Q ss_pred CeEEEEeeEEEc
Q 026256 195 DTINIDVTVYLN 206 (241)
Q Consensus 195 DiV~IDvg~~~~ 206 (241)
+++.|+--+...
T Consensus 199 mv~aIEPmi~~G 210 (255)
T COG0024 199 MVFAIEPMINTG 210 (255)
T ss_pred CEEEEeeEEEcC
Confidence 999999777765
No 67
>cd01085 APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline aminopeptidase, aminopeptidase P, and aminoacylproline aminopeptidase. Catalyses release of any N-terminal amino acid, including proline, that is linked with proline, even from a dipeptide or tripeptide.
Probab=95.50 E-value=0.3 Score=42.87 Aligned_cols=98 Identities=16% Similarity=0.055 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHhHhc-CCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceee--ecCCCcccc--cCCCCCccCC
Q 026256 119 MRVSGRLAAQVLEYAGTLV-KPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVC--TSVNECICH--GIPDSRALED 193 (241)
Q Consensus 119 mR~A~~ia~~~l~~a~~~I-kpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~--tg~N~~i~H--g~P~~r~Lq~ 193 (241)
.|++..++.++..++.+.+ +||++-.+|++++.+.+.+.|.+- . +.....|. ....+.-.. ...++.+|++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~g~~~--~--h~~GHgIG~~l~~hE~P~i~~~~~~~~~L~~ 188 (224)
T cd01085 113 QKRDYTLVLKGHIALARAKFPKGTTGSQLDALARQPLWKAGLDY--G--HGTGHGVGSFLNVHEGPQSISPAPNNVPLKA 188 (224)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhCCCC--C--CCCCCCCCCCCcCCCCCCcCCcCCCCCCcCC
Confidence 3445555566666777666 599999999999999999888531 0 11122222 122222111 1124578999
Q ss_pred CCeEEEEeeEEEcCcCCCcEEEceEeeeecC
Q 026256 194 GDTINIDVTVYLNQMIEPGFWGASGSLPLPP 224 (241)
Q Consensus 194 GDiV~IDvg~~~~~~~~~GY~~D~tRT~~vG 224 (241)
|.++.|+.+.+.. + .+..-+..|++|.
T Consensus 189 GmvftiEP~iy~~-g---~~gvried~v~Vt 215 (224)
T cd01085 189 GMILSNEPGYYKE-G---KYGIRIENLVLVV 215 (224)
T ss_pred CCEEEECCEeEeC-C---CeEEEeeEEEEEe
Confidence 9999999999975 1 3445688888886
No 68
>PRK13607 proline dipeptidase; Provisional
Probab=95.36 E-value=0.11 Score=50.39 Aligned_cols=88 Identities=19% Similarity=0.218 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHH----HHcCCCCC-------CCCCC--CCCce----eeecCCCcc
Q 026256 119 MRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI----IDNGAYPS-------PLGYG--GFPKS----VCTSVNECI 181 (241)
Q Consensus 119 mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i----~~~Ga~ps-------plgY~--~Fp~~----V~tg~N~~i 181 (241)
.++..+++.++++++.+++|||++-.||+.++++.+ .+.|.... ..++. .|++. +...+.++-
T Consensus 270 ~~~ly~~v~~aq~aai~~ikPG~~~~dv~~aa~~~i~~~L~~~Gl~~g~~~~~~~~~g~~~~~f~HglGH~iGldvHd~~ 349 (443)
T PRK13607 270 FAALIKDVNKEQLALIATMKPGVSYVDLHIQMHQRIAKLLRKFQIVTGLSEEAMVEQGITSPFFPHGLGHPLGLQVHDVA 349 (443)
T ss_pred HHHHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHhCCCceEecCCCccCccCcccccCC
Confidence 347788999999999999999999999999887655 44444320 00110 13333 233333321
Q ss_pred cc-------------cCC---CCCccCCCCeEEEEeeEEEc
Q 026256 182 CH-------------GIP---DSRALEDGDTINIDVTVYLN 206 (241)
Q Consensus 182 ~H-------------g~P---~~r~Lq~GDiV~IDvg~~~~ 206 (241)
.+ +.| ..++|++|.+++|+-|.|+.
T Consensus 350 ~~~~~~~~~~~~~~~~~~~l~~~~~L~~GmV~TvEPGiY~~ 390 (443)
T PRK13607 350 GFMQDDRGTHLAAPEKHPYLRCTRVLEPGMVLTIEPGLYFI 390 (443)
T ss_pred CcccccccccccccccccccccCCcCCCCcEEEECCeeeeC
Confidence 00 001 35789999999999999986
No 69
>KOG2738 consensus Putative methionine aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=92.94 E-value=0.61 Score=43.55 Aligned_cols=84 Identities=24% Similarity=0.335 Sum_probs=60.6
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCC--CCCceeeecCCCcccccCCC--CCccC
Q 026256 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYG--GFPKSVCTSVNECICHGIPD--SRALE 192 (241)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~--~Fp~~V~tg~N~~i~Hg~P~--~r~Lq 192 (241)
+..|+-.+.+.++|+.+.+.+|||++-.||-.++++...++|..- --.|. |....+-+.+| ++|+.-+ -.++.
T Consensus 229 e~~k~LVkvT~EcL~kaI~~~kpGv~freiG~iI~kha~~~g~sV-Vr~ycGHGig~~FH~~Pn--ipHya~n~a~GvM~ 305 (369)
T KOG2738|consen 229 EKAKKLVKVTRECLEKAIAIVKPGVSFREIGNIIQKHATKNGYSV-VRSYCGHGIGRVFHCAPN--IPHYAKNKAPGVMK 305 (369)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHhhhcCcee-ehhhhccccccccccCCC--chhhcccCCcceee
Confidence 478888999999999999999999999999999999998887532 11132 22333334443 5776543 34688
Q ss_pred CCCeEEEEeeE
Q 026256 193 DGDTINIDVTV 203 (241)
Q Consensus 193 ~GDiV~IDvg~ 203 (241)
+|....|+--.
T Consensus 306 ~G~tFTIEPmi 316 (369)
T KOG2738|consen 306 PGQTFTIEPMI 316 (369)
T ss_pred cCceEEeeeee
Confidence 99988876433
No 70
>KOG1189 consensus Global transcriptional regulator, cell division control protein [Amino acid transport and metabolism]
Probab=87.09 E-value=2.4 Score=43.99 Aligned_cols=106 Identities=14% Similarity=0.121 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCC-----CcccccCCCCCccC
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVN-----ECICHGIPDSRALE 192 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N-----~~i~Hg~P~~r~Lq 192 (241)
.|.++....-.+.+++..+++||.+-.+|...+..++.+++-+-. ..|.+.+++|.. +...-+.-++++|+
T Consensus 258 emq~nY~fLl~aqe~il~~lrpG~ki~dVY~~~l~~v~k~~Pel~----~~~~k~lG~~iGlEFREssl~inaKnd~~lk 333 (960)
T KOG1189|consen 258 EMQENYEFLLAAQEEILKLLRPGTKIGDVYEKALDYVEKNKPELV----PNFTKNLGFGIGLEFRESSLVINAKNDRVLK 333 (960)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCchhHHHHHHHHHHHhcCcchh----hhhhhhcccccceeeecccccccccchhhhc
Confidence 467788888888999999999999999999999999999875422 135555444332 11111222568999
Q ss_pred CCCeEEEEeeEEE--cCcCCCcEEEceEeeeecCCCC
Q 026256 193 DGDTINIDVTVYL--NQMIEPGFWGASGSLPLPPCNV 227 (241)
Q Consensus 193 ~GDiV~IDvg~~~--~~~~~~GY~~D~tRT~~vG~e~ 227 (241)
.|++.+|-+|..- ++--..-|.--++-|+.||+..
T Consensus 334 ~gmvFni~lGf~nl~n~~~~~~yaL~l~DTvlv~e~~ 370 (960)
T KOG1189|consen 334 KGMVFNISLGFSNLTNPESKNSYALLLSDTVLVGEDP 370 (960)
T ss_pred cCcEEEEeeccccccCcccccchhhhccceeeecCCC
Confidence 9999999888752 1100114666688999999433
No 71
>COG5406 Nucleosome binding factor SPN, SPT16 subunit [Transcription / DNA replication, recombination, and repair / Chromatin structure and dynamics]
Probab=74.31 E-value=11 Score=38.77 Aligned_cols=79 Identities=22% Similarity=0.284 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecC--C---CcccccCCCCCccCCC
Q 026256 120 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSV--N---ECICHGIPDSRALEDG 194 (241)
Q Consensus 120 R~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~--N---~~i~Hg~P~~r~Lq~G 194 (241)
.+-...+-....+....++||.+-.+|...+..++.+.|-+-.| .|-..|+.+. - ...+...-++|+||.|
T Consensus 301 ~~Ny~fl~~lQk~i~~~~rpG~~~g~iY~~~~~yi~~~~pel~p----nF~~nvG~~igiefR~s~~~~nvkn~r~lq~g 376 (1001)
T COG5406 301 QKNYEFLYMLQKYILGLVRPGTDSGIIYSEAEKYISSNGPELGP----NFIYNVGLMIGIEFRSSQKPFNVKNGRVLQAG 376 (1001)
T ss_pred hhhHHHHHHHHHHHHhhcCCCCCchhHHHHHHHHHHhcCCccCc----hHhhhhhhhccccccccccceeccCCceeccc
Confidence 33444555566677779999999999999999999998865322 3444443322 1 1122233457999999
Q ss_pred CeEEEEee
Q 026256 195 DTINIDVT 202 (241)
Q Consensus 195 DiV~IDvg 202 (241)
++.+|.+|
T Consensus 377 ~~fnis~g 384 (1001)
T COG5406 377 CIFNISLG 384 (1001)
T ss_pred cEEEEeec
Confidence 99999874
No 72
>cd01666 TGS_DRG_C TGS_DRG_C: DRG (developmentally regulated GTP-binding protein) represents a family of GTP-binding proteins that includes two members, DRG1 and DRG2. DRG1 and DRG2 have a C-terminal TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) with a predominantly beta-sheet structure. The function of TGS is unknown but its presence in two types of regulatory proteins (the DRG GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=72.24 E-value=15 Score=27.13 Aligned_cols=52 Identities=15% Similarity=0.245 Sum_probs=33.0
Q ss_pred cCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCC-cccccCCCCCccCCCCeEEE
Q 026256 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNE-CICHGIPDSRALEDGDTINI 199 (241)
Q Consensus 137 IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~-~i~Hg~P~~r~Lq~GDiV~I 199 (241)
++.|-|-.|+...+|..+.++= ....-.|.+. ....-.+-+.+|++||+|.|
T Consensus 21 L~~GaTV~D~a~~iH~di~~~f-----------~~A~v~g~s~~~~gq~Vgl~~~L~d~DvVeI 73 (75)
T cd01666 21 LRRGSTVEDVCNKIHKDLVKQF-----------KYALVWGSSVKHSPQRVGLDHVLEDEDVVQI 73 (75)
T ss_pred ECCCCCHHHHHHHHHHHHHHhC-----------CeeEEeccCCcCCCeECCCCCEecCCCEEEE
Confidence 4679999999999998776532 1111122221 01122456889999999987
No 73
>KOG2414 consensus Putative Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=57.15 E-value=67 Score=31.55 Aligned_cols=92 Identities=18% Similarity=0.216 Sum_probs=55.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhHhcCC--CCcHHHHHHH----HHHHHHHcCCCCCCC-----CCCCCCceee--ecC
Q 026256 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKP--GITTDEIDKA----VHQMIIDNGAYPSPL-----GYGGFPKSVC--TSV 177 (241)
Q Consensus 111 Ks~~EIe~mR~A~~ia~~~l~~a~~~Ikp--GvTe~EId~~----v~~~i~~~Ga~pspl-----gY~~Fp~~V~--tg~ 177 (241)
-|+.+.+.. +..-++.+++.+.++| |.|-.+|-.. +.+.+.+.|...+.- .+.-+|+.|+ .|.
T Consensus 335 Fs~~Qr~LY----eavL~vq~ecik~c~~~~g~sL~~l~~~s~~Ll~~~Lk~lGI~kt~~ee~~~~~klcPHhVgHyLGm 410 (488)
T KOG2414|consen 335 FSDAQRDLY----EAVLQVQEECIKYCKPSNGTSLSQLFERSNELLGQELKELGIRKTDREEMIQAEKLCPHHVGHYLGM 410 (488)
T ss_pred cCcHHHHHH----HHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHhCcccchHHHHHhhhhcCCcccchhcCc
Confidence 355454444 4455566677777888 9998877655 456677778644321 1122344443 232
Q ss_pred CCcccccCCCCCccCCCCeEEEEeeEEEc
Q 026256 178 NECICHGIPDSRALEDGDTINIDVTVYLN 206 (241)
Q Consensus 178 N~~i~Hg~P~~r~Lq~GDiV~IDvg~~~~ 206 (241)
.-..|-..|.+.+|++|.+++|+-|+|..
T Consensus 411 DVHD~p~v~r~~pL~pg~ViTIEPGvYIP 439 (488)
T KOG2414|consen 411 DVHDCPTVSRDIPLQPGMVITIEPGVYIP 439 (488)
T ss_pred ccccCCCCCCCccCCCCceEEecCceecC
Confidence 22122223568899999999999999974
No 74
>cd04938 TGS_Obg-like TGS_Obg-like: The C-terminal TGS domain of Obg-like GTPases such as those present in DRG (developmentally regulated GTP-binding protein), and GTP-binding proteins Ygr210 and YchF. The TGS domain (named after the ThrRS, GTPase, and SpoT proteins where it occurs) is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=55.79 E-value=22 Score=26.21 Aligned_cols=47 Identities=19% Similarity=0.257 Sum_probs=31.5
Q ss_pred cCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCeEEE
Q 026256 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (241)
Q Consensus 137 IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~GDiV~I 199 (241)
++.|.|-.|++..+|.-+.+. |-...-.+ +.-...+..|++||+|.|
T Consensus 28 l~~g~tv~d~a~~IH~d~~~~-----------F~~A~v~~-----~~~vg~d~~l~d~DVv~i 74 (76)
T cd04938 28 VKKGTTVGDVARKIHGDLEKG-----------FIEAVGGR-----RRLEGKDVILGKNDILKF 74 (76)
T ss_pred EcCCCCHHHHHHHHhHHHHhc-----------cEEEEEcc-----CEEECCCEEecCCCEEEE
Confidence 456899999999999766542 22222122 223346789999999987
No 75
>PF03477 ATP-cone: ATP cone domain; InterPro: IPR005144 The ATP-cone is an evolutionarily mobile, ATP-binding regulatory domain which is found in a variety of proteins including ribonucleotide reductases, phosphoglycerate kinases and transcriptional regulators []. In ribonucleotide reductase protein R1 (P28903 from SWISSPROT) from Escherichia coli this domain is located at the N terminus, and is composed mostly of helices []. It forms part of the allosteric effector region and contains the general allosteric activity site in a cleft located at the tip of the N-terminal region []. This site binds either ATP (activating) or dATP (inhibitory), with the base bound in a hydrophobic pocket and the phosphates bound to basic residues. Substrate binding to this site is thought to affect enzyme activity by altering the relative positions of the two subunits of ribonucleotide reductase.; PDB: 2XO4_A 1RLR_A 7R1R_B 5R1R_A 2XO5_B 2XAW_A 2R1R_C 2XAY_B 2X0X_C 2XAZ_A ....
Probab=54.28 E-value=9.1 Score=28.23 Aligned_cols=36 Identities=25% Similarity=0.326 Sum_probs=23.9
Q ss_pred HHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCC
Q 026256 124 RLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGA 159 (241)
Q Consensus 124 ~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga 159 (241)
.|+.++.....+.-+.++|+.||..++...++++|.
T Consensus 39 ~i~~~V~~~l~~~~~~~is~~eI~~~v~~~L~~~~~ 74 (90)
T PF03477_consen 39 EIASEVENKLYDSGKEEISTEEIQDIVENALMEEGF 74 (90)
T ss_dssp HHHHHHHTC-ST----TEEHHHHHHHHHHHHHTSTT
T ss_pred HHHHHHHHHHHhccCCCeeHHHHHHHHHHHHHcCCh
Confidence 344555554444444599999999999999998774
No 76
>PF05184 SapB_1: Saposin-like type B, region 1; InterPro: IPR007856 Synonym(s):cerebroside sulphate activator, CSAct Saposin B is a small non-enzymatic glycoprotein required for the breakdown of cerebroside sulphates (sulphatides) in lysosomes. Saposin B contains three intramolecular disulphide bridges, exists as a dimer and is remarkably heat, protease, and pH stable. The crystal structure of human saposin B reveals an unusual shell-like dimer consisting of a monolayer of alpha-helices enclosing a large hydrophobic cavity. Although the secondary structure of saposin B is similar to that of the known monomeric members of the saposin-like superfamily, the helices are repacked into a different tertiary arrangement to form the homodimer. A comparison of the two forms of the saposin B dimer suggests that extraction of target lipids from membranes involves a conformational change that facilitates access to the inner cavity [].; GO: 0006629 lipid metabolic process; PDB: 1N69_C 1QDM_C 4DDJ_A 2DOB_A 1OF9_A 2Z9A_A 1M12_A 2GTG_A 1SN6_A 2QYP_B ....
Probab=50.46 E-value=31 Score=21.29 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHH
Q 026256 122 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMII 155 (241)
Q Consensus 122 A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~ 155 (241)
.|.+...++..+.+.++...|+.||...+.+.+.
T Consensus 3 ~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~ 36 (39)
T PF05184_consen 3 ECDICKFVVKEIEKLLKNNKTEEEIKKALEKACN 36 (39)
T ss_dssp HHHHHHHHHHHHHHHHHSTCHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHh
Confidence 4678888999999999999999999999988764
No 77
>PRK01490 tig trigger factor; Provisional
Probab=50.37 E-value=58 Score=31.15 Aligned_cols=56 Identities=18% Similarity=0.214 Sum_probs=39.3
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEc---
Q 026256 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNQMIEPGFWGA--- 216 (241)
Q Consensus 140 GvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D--- 216 (241)
-+|+.||+..+.+...+++-+. +.+++++.||.|.+|+....+ |-.-|
T Consensus 131 ~vtde~vd~~i~~l~~~~a~~~------------------------~~~~~~~~gD~V~vd~~~~~~-----g~~~~~~~ 181 (435)
T PRK01490 131 EVTDEDVDEELERLRKQFATLV------------------------PVERPAENGDRVTIDFVGSID-----GEEFEGGK 181 (435)
T ss_pred CCCHHHHHHHHHHHHHhCCccc------------------------cccccCCCCCEEEEEEEEEEC-----CEECcCCC
Confidence 4789999999888777654321 113568999999999999977 53322
Q ss_pred -eEeeeecC
Q 026256 217 -SGSLPLPP 224 (241)
Q Consensus 217 -~tRT~~vG 224 (241)
-..+|.+|
T Consensus 182 ~~~~~~~lg 190 (435)
T PRK01490 182 AEDFSLELG 190 (435)
T ss_pred CCceEEEEc
Confidence 23567777
No 78
>TIGR00115 tig trigger factor. Trigger factor is a ribosome-associated molecular chaperone and is the first chaperone to interact with nascent polypeptide. Trigger factor can bind at the same time as the signal recognition particle (SRP), but is excluded by the SRP receptor (FtsY). The central domain of trigger factor has peptidyl-prolyl cis/trans isomerase activity. This protein is found in a single copy in virtually every bacterial genome.
Probab=44.17 E-value=81 Score=29.82 Aligned_cols=57 Identities=19% Similarity=0.270 Sum_probs=40.0
Q ss_pred CCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCeEEEEeeEEEcCcCCCcEEEce--
Q 026256 140 GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLNQMIEPGFWGAS-- 217 (241)
Q Consensus 140 GvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~GDiV~IDvg~~~~~~~~~GY~~D~-- 217 (241)
-+|+.+|+..+.+...+++-+. . -++++++.||.|.+|+..+.+ |-.-|.
T Consensus 119 ~vtde~vd~~i~~l~~~~a~~~-----------------~------~~~~~~~~gD~V~v~~~~~~d-----g~~~~~~~ 170 (408)
T TIGR00115 119 EVTDEDVDEELEKLREQNATLV-----------------P------VERRAAEKGDRVTIDFEGFID-----GEAFEGGK 170 (408)
T ss_pred CCCHHHHHHHHHHHHHhCCccc-----------------c------ccccccCCCCEEEEEEEEEEC-----CEECcCCC
Confidence 4799999999998887765321 0 023578999999999998876 544333
Q ss_pred --EeeeecC
Q 026256 218 --GSLPLPP 224 (241)
Q Consensus 218 --tRT~~vG 224 (241)
..+|.+|
T Consensus 171 ~~~~~~~lg 179 (408)
T TIGR00115 171 AENFSLELG 179 (408)
T ss_pred CCCeEEEEC
Confidence 2467777
No 79
>KOG2413 consensus Xaa-Pro aminopeptidase [Amino acid transport and metabolism]
Probab=38.72 E-value=88 Score=31.92 Aligned_cols=81 Identities=15% Similarity=0.108 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHHHHhHhcCC-CCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCccccc-----C-----C
Q 026256 118 CMRVSGRLAAQVLEYAGTLVKP-GITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHG-----I-----P 186 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~~Ikp-GvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg-----~-----P 186 (241)
..|++..++-+++-++..++-| |..-..+|.+.+.++-+.|.+- .....-|+....||. + +
T Consensus 427 eek~~yT~VLkGhi~la~~vFP~~t~g~~lD~laR~~LW~~gLDy--------~HgTGHGVG~fLnVhE~P~~is~r~~~ 498 (606)
T KOG2413|consen 427 EEKEAYTLVLKGHIALARAVFPKGTKGSVLDALARSALWKAGLDY--------GHGTGHGVGSFLNVHEGPIGIGYRPYS 498 (606)
T ss_pred HHHHHHHHHHHhhhHhhhcccCCCCCcchhHHHHHHHHHhhcccc--------CCCCCcccccceEeccCCceeeeeecC
Confidence 3456666777777777776665 7778899999999999988752 122222333333322 1 3
Q ss_pred CCCccCCCCeEEEEeeEEEc
Q 026256 187 DSRALEDGDTINIDVTVYLN 206 (241)
Q Consensus 187 ~~r~Lq~GDiV~IDvg~~~~ 206 (241)
++-+|+.|.+++++-|-|-+
T Consensus 499 ~~~~l~ag~~~s~EPGYY~d 518 (606)
T KOG2413|consen 499 SNFPLQAGMVFSIEPGYYKD 518 (606)
T ss_pred CCchhcCceEeccCCccccc
Confidence 45679999998887665554
No 80
>KOG2776 consensus Metallopeptidase [General function prediction only]
Probab=37.02 E-value=1.7e+02 Score=28.22 Aligned_cols=86 Identities=19% Similarity=0.174 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCCCCCC---------CCCCceeeecCCCcccccCCCCCc
Q 026256 120 RVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPSPLGY---------GGFPKSVCTSVNECICHGIPDSRA 190 (241)
Q Consensus 120 R~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~psplgY---------~~Fp~~V~tg~N~~i~Hg~P~~r~ 190 (241)
-.+.+.|..++++|..+++||-+-+.|-+.+.+.+.+.++.|..-+- .|-++++......-.-| -+.-.
T Consensus 143 ADvI~AAh~A~eaa~rllkpgn~n~~vT~~i~k~aas~~c~pVegmlshql~~~~idGeKtIi~n~sdqq~~~--~e~~~ 220 (398)
T KOG2776|consen 143 ADVIAAAHLAAEAALRLLKPGNTNTQVTRAIVKTAASYGCKPVEGMLSHQLKQHVIDGEKTIIQNPSDQQKKE--HEKTE 220 (398)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCCchhhHHHHHHHHHhCCcccccchhHHHHhhhhcCCceEecCcchhhhcc--ccccc
Confidence 34455677788899999999999999999999999999887631100 02223332211111011 13456
Q ss_pred cCCCCeEEEEeeEEEcC
Q 026256 191 LEDGDTINIDVTVYLNQ 207 (241)
Q Consensus 191 Lq~GDiV~IDvg~~~~~ 207 (241)
+++.+...+|+.+.+++
T Consensus 221 fe~~Evya~Di~~stg~ 237 (398)
T KOG2776|consen 221 FEEHEVYAIDILVSTGE 237 (398)
T ss_pred cccceeEEEEEEEecCC
Confidence 88899999999998874
No 81
>PRK00464 nrdR transcriptional regulator NrdR; Validated
Probab=36.38 E-value=95 Score=26.08 Aligned_cols=40 Identities=8% Similarity=0.019 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCC
Q 026256 122 SGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYP 161 (241)
Q Consensus 122 A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~p 161 (241)
+..+++.+...+....+.+++..||..++.+.|++.|-..
T Consensus 84 ~~~i~~~V~~~l~~~~~~~IsveEIqDiVE~~L~~~~~~a 123 (154)
T PRK00464 84 IEAAVSRIERQLRASGEREVPSKEIGELVMEELKKLDEVA 123 (154)
T ss_pred HHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHhcCCEE
Confidence 3345556656665555568999999999999999998653
No 82
>KOG2737 consensus Putative metallopeptidase [General function prediction only]
Probab=34.66 E-value=1e+02 Score=30.14 Aligned_cols=32 Identities=13% Similarity=0.234 Sum_probs=22.9
Q ss_pred HHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHH
Q 026256 125 LAAQVLEYAGTLVKPGITTDEIDKAVHQMIID 156 (241)
Q Consensus 125 ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~ 156 (241)
..-.+-.++.+++|||+.-.++++..+..+.+
T Consensus 307 aVLda~navm~a~KpGv~W~Dmh~La~kvlle 338 (492)
T KOG2737|consen 307 AVLDASNAVMEAMKPGVWWVDMHKLAEKVLLE 338 (492)
T ss_pred HHHHHHHHHHHhcCCCCccccHHHHHHHHHHH
Confidence 34445567888999999988888876654443
No 83
>cd01669 TGS_Ygr210_C TGS_Ygr210_C: The C-terminal TGS domain of Ygr210 GTP-binding protein which is a member of Obg-like family of GTPases, and present in archaea. Several Obg-like family members possess a C-terminal RNA-binding domain, the TGS domain, which is also present in threonyl-tRNA synthetase and in bacterial guanosine polyphosphatase SpoT. TGS is a small domain of about 50 amino acid residues with a predominantly beta-sheet structure. There is no direct information on the function of the TGS domain, but its presence in two types of regulatory proteins (the GTPases and guanosine polyphosphate phosphohydrolases/synthetases) suggests a ligand (most likely nucleotide)-binding, regulatory role.
Probab=31.11 E-value=1.4e+02 Score=21.91 Aligned_cols=48 Identities=23% Similarity=0.338 Sum_probs=31.4
Q ss_pred cCCCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCeEEE
Q 026256 137 VKPGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINI 199 (241)
Q Consensus 137 IkpGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~GDiV~I 199 (241)
++.|.|-.|.+..+|..+.+. |-..+.. .| ..-.+-+.+|++||+|.|
T Consensus 27 l~~GaTv~D~A~~IHtdi~~~-----------f~~Ai~~-k~---~~~vg~~~~L~dgDvV~I 74 (76)
T cd01669 27 LPKGSTARDLAYAIHTDIGDG-----------FLHAIDA-RT---GRRVGEDYELKHRDVIKI 74 (76)
T ss_pred ECCCCCHHHHHHHHHHHHHhc-----------ceeeEEe-eC---CEEeCCCcEecCCCEEEE
Confidence 456999999999999776542 1111111 12 233466889999999987
No 84
>PF10415 FumaraseC_C: Fumarase C C-terminus; InterPro: IPR018951 Fumarase C catalyses the stereo-specific interconversion of fumarate to L-malate as part of the Krebs cycle. The full-length protein forms a tetramer with visible globular shape. FumaraseC_C is the C-terminal 65 residues referred to as domain 3. The core of the molecule consists of a bundle of 20 alpha-helices from the five-helix bundle of domain 2. The projections from the core of the tetramer are generated from domains 1 and 3 of each subunit []. This entry does not appear to be part of either the active site or the activation site but is helical in structure forming a little bundle. ; GO: 0016829 lyase activity, 0006099 tricarboxylic acid cycle; PDB: 3RRP_A 3OCE_D 3OCF_D 3E04_B 3GTD_A 3R6V_F 3R6Q_F 1J3U_B 1FUR_A 1YFE_A ....
Probab=31.09 E-value=64 Score=22.30 Aligned_cols=34 Identities=18% Similarity=0.389 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHhH----hcCCC-CcHHHHHHHHH
Q 026256 118 CMRVSGRLAAQVLEYAGT----LVKPG-ITTDEIDKAVH 151 (241)
Q Consensus 118 ~mR~A~~ia~~~l~~a~~----~IkpG-vTe~EId~~v~ 151 (241)
.+.+|++||.+++..-.. .+.-| +|+.|+++++.
T Consensus 10 GYe~aa~iAk~A~~~g~svre~v~~~g~lt~ee~d~ll~ 48 (55)
T PF10415_consen 10 GYEKAAEIAKEALAEGRSVREVVLEEGLLTEEELDELLD 48 (55)
T ss_dssp HHHHHHHHHHHHHHHT--HHHHHHHTTSS-HHHHHHHTS
T ss_pred ccHHHHHHHHHHHHcCCCHHHHHHHcCCCCHHHHHHHcC
Confidence 467888999888866432 23456 79999998864
No 85
>PF00249 Myb_DNA-binding: Myb-like DNA-binding domain; InterPro: IPR014778 The retroviral oncogene v-myb, and its cellular counterpart c-myb, encode nuclear DNA-binding proteins. These belong to the SANT domain family that specifically recognise the sequence YAAC(G/T)G [, ]. In myb, one of the most conserved regions consisting of three tandem repeats has been shown to be involved in DNA-binding [].; PDB: 1X41_A 2XAF_B 2XAG_B 2XAH_B 2UXN_B 2Y48_B 2XAQ_B 2X0L_B 2IW5_B 2XAJ_B ....
Probab=29.69 E-value=97 Score=20.08 Aligned_cols=43 Identities=9% Similarity=-0.027 Sum_probs=33.1
Q ss_pred cCCHHHHHHHHHHHHHHHHH-HHHHhHhcCCCCcHHHHHHHHHH
Q 026256 110 VHDEKGIECMRVSGRLAAQV-LEYAGTLVKPGITTDEIDKAVHQ 152 (241)
Q Consensus 110 VKs~~EIe~mR~A~~ia~~~-l~~a~~~IkpGvTe~EId~~v~~ 152 (241)
--|++|-+.+.+|.+.-..- ...+...+.+|.|..++......
T Consensus 3 ~Wt~eE~~~l~~~v~~~g~~~W~~Ia~~~~~~Rt~~qc~~~~~~ 46 (48)
T PF00249_consen 3 PWTEEEDEKLLEAVKKYGKDNWKKIAKRMPGGRTAKQCRSRYQN 46 (48)
T ss_dssp SS-HHHHHHHHHHHHHSTTTHHHHHHHHHSSSSTHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCcHHHHHHHHcCCCCCHHHHHHHHHh
Confidence 34889999999998887777 77787777778898888766544
No 86
>PF04363 DUF496: Protein of unknown function (DUF496); InterPro: IPR007458 Members of this family are uncharacterised proteins.
Probab=29.63 E-value=1.6e+02 Score=22.83 Aligned_cols=37 Identities=16% Similarity=0.328 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHH
Q 026256 117 ECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMI 154 (241)
Q Consensus 117 e~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i 154 (241)
..||.-.+-..- ++-..+.|+|+||-.||.+++..+-
T Consensus 26 kKIRDNqKRV~L-LdNL~~YI~~~Ms~edi~~II~nMr 62 (95)
T PF04363_consen 26 KKIRDNQKRVLL-LDNLSDYIKPDMSIEDIRAIIENMR 62 (95)
T ss_pred HHHhhhHHHHHH-HHHHHHHccCCCCHHHHHHHHHHHH
Confidence 356665554443 7788899999999999999887554
No 87
>COG1163 DRG Predicted GTPase [General function prediction only]
Probab=26.37 E-value=1.6e+02 Score=28.20 Aligned_cols=48 Identities=23% Similarity=0.343 Sum_probs=33.6
Q ss_pred CCCcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccC---CCCCccCCCCeEEE
Q 026256 139 PGITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGI---PDSRALEDGDTINI 199 (241)
Q Consensus 139 pGvTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~---P~~r~Lq~GDiV~I 199 (241)
.|-|-.|+++.+|.-+.++ |-...-.|. .+.|.- .-+.+|+++|+|.|
T Consensus 312 ~GsTV~Dvc~~IH~~l~~~-----------FryA~VWGk--Svk~~~QrVG~dHvLeD~DIV~I 362 (365)
T COG1163 312 RGSTVGDVCRKIHRDLVEN-----------FRYARVWGK--SVKHPGQRVGLDHVLEDEDIVEI 362 (365)
T ss_pred CCCcHHHHHHHHHHHHHHh-----------cceEEEecc--CCCCCccccCcCcCccCCCeEEE
Confidence 4789999999999999874 333333444 234532 24789999999987
No 88
>TIGR03147 cyt_nit_nrfF cytochrome c nitrite reductase, accessory protein NrfF.
Probab=26.26 E-value=88 Score=25.56 Aligned_cols=29 Identities=14% Similarity=0.158 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHhHhcCCCCcHHHHHHHHH
Q 026256 123 GRLAAQVLEYAGTLVKPGITTDEIDKAVH 151 (241)
Q Consensus 123 ~~ia~~~l~~a~~~IkpGvTe~EId~~v~ 151 (241)
+.+|.++-..+.+.|..|.|++||-..+.
T Consensus 56 a~iA~dmR~~Vr~~i~~G~Sd~eI~~~~v 84 (126)
T TIGR03147 56 SPIAYDLRHEVYSMVNEGKSNQQIIDFMT 84 (126)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 36889999999999999999999876643
No 89
>PF04355 SmpA_OmlA: SmpA / OmlA family; InterPro: IPR007450 This is a bacterial outer membrane lipoprotein, possibly involved in maintaining the structural integrity of the cell envelope []. The lipid attachment site is a conserved N-terminal cysteine residue sometimes found adjacent to the OmpA domain (IPR006665 from INTERPRO).; GO: 0019867 outer membrane; PDB: 4DM5_C 2PXG_A 2YH9_B 2KXX_A 2KM7_A.
Probab=26.21 E-value=47 Score=23.39 Aligned_cols=19 Identities=26% Similarity=0.469 Sum_probs=14.2
Q ss_pred HHhHhcCCCCcHHHHHHHH
Q 026256 132 YAGTLVKPGITTDEIDKAV 150 (241)
Q Consensus 132 ~a~~~IkpGvTe~EId~~v 150 (241)
...+.|++|||.+||..++
T Consensus 7 ~~~~~i~~GmTk~qV~~lL 25 (71)
T PF04355_consen 7 EQLAQIKPGMTKDQVRALL 25 (71)
T ss_dssp HHHTTT-TTSBHHHHHHHH
T ss_pred HHHHhhcCCCCHHHHHHhc
Confidence 3567899999999998663
No 90
>PRK05423 hypothetical protein; Provisional
Probab=24.85 E-value=1e+02 Score=24.21 Aligned_cols=28 Identities=29% Similarity=0.567 Sum_probs=22.5
Q ss_pred HHHHHhHhcCCCCcHHHHHHHHHHHHHH
Q 026256 129 VLEYAGTLVKPGITTDEIDKAVHQMIID 156 (241)
Q Consensus 129 ~l~~a~~~IkpGvTe~EId~~v~~~i~~ 156 (241)
.++-..+.|+||||..||..++..+--+
T Consensus 44 LLdNL~~YIk~~Ms~e~i~~II~nMr~D 71 (104)
T PRK05423 44 LLDNLSDYIKPGMSIEEIQGIIANMKSD 71 (104)
T ss_pred HHHHHHHHcCCCCCHHHHHHHHHHHHhh
Confidence 4566778899999999999998765443
No 91
>COG0544 Tig FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) [Posttranslational modification, protein turnover, chaperones]
Probab=24.79 E-value=1.7e+02 Score=28.72 Aligned_cols=42 Identities=21% Similarity=0.399 Sum_probs=28.9
Q ss_pred CcHHHHHHHHHHHHHHcCCCCCCCCCCCCCceeeecCCCcccccCCCCCccCCCCeEEEEeeEEEc
Q 026256 141 ITTDEIDKAVHQMIIDNGAYPSPLGYGGFPKSVCTSVNECICHGIPDSRALEDGDTINIDVTVYLN 206 (241)
Q Consensus 141 vTe~EId~~v~~~i~~~Ga~psplgY~~Fp~~V~tg~N~~i~Hg~P~~r~Lq~GDiV~IDvg~~~~ 206 (241)
+|+.||+..+.....++.-+ .|.++.++.||.|.||+.+..+
T Consensus 132 v~d~dvd~~L~~l~~~~a~~------------------------~~~e~~a~~gD~v~IDf~g~iD 173 (441)
T COG0544 132 VTDEDVDEELEKLRKRFATL------------------------EPVEGAAENGDRVTIDFEGSVD 173 (441)
T ss_pred cCHHHHHHHHHHHHHhcCcc------------------------cccccccccCCEEEEEEEEEEc
Confidence 57888888877665553321 1222228999999999999876
No 92
>PF00254 FKBP_C: FKBP-type peptidyl-prolyl cis-trans isomerase; InterPro: IPR001179 Synonym(s): Peptidylprolyl cis-trans isomerase FKBP-type peptidylprolyl isomerases (5.2.1.8 from EC) in vertebrates, are receptors for the two immunosuppressants, FK506 and rapamycin. The drugs inhibit T cell proliferation by arresting two distinct cytoplasmic signal transmission pathways. Peptidylprolyl isomerases accelerate protein folding by catalysing the cis-trans isomerisation of proline imidic peptide bonds in oligopeptides. These proteins are found in a variety of organisms.; GO: 0006457 protein folding; PDB: 1IX5_A 3JXV_A 3JYM_A 1T11_A 1PBK_A 1FD9_A 2VCD_A 3B7X_A 1Q6H_B 1Q6I_B ....
Probab=24.41 E-value=1.7e+02 Score=21.12 Aligned_cols=41 Identities=24% Similarity=0.097 Sum_probs=29.3
Q ss_pred CCccCCCCeEEEEeeEEE-cCcCCCcEEEceE------eeeecCC-CCCHHHHH
Q 026256 188 SRALEDGDTINIDVTVYL-NQMIEPGFWGASG------SLPLPPC-NVLHLALS 233 (241)
Q Consensus 188 ~r~Lq~GDiV~IDvg~~~-~~~~~~GY~~D~t------RT~~vG~-e~s~e~~r 233 (241)
.+..++||.|.|++..++ + |-.-|.+ .+|.+|. ..-+..++
T Consensus 2 ~~~~~~gd~V~i~y~~~~~~-----g~~~~~~~~~~~~~~~~~g~~~~i~g~e~ 50 (94)
T PF00254_consen 2 PRTPKEGDTVTIHYTGRLED-----GKVFDSSYQEGEPFEFRLGSGQVIPGLEE 50 (94)
T ss_dssp SSSBSTTSEEEEEEEEEETT-----SEEEEETTTTTSEEEEETTSSSSSHHHHH
T ss_pred CccCCCCCEEEEEEEEEECC-----CcEEEEeeecCcceeeeeccCccccchhh
Confidence 356899999999999998 5 6666666 7777873 34444443
No 93
>PF00725 3HCDH: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; InterPro: IPR006108 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major region of similarities in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3MOG_A 2WTB_A 3ADP_A 3ADO_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B 3K6J_A 1ZCJ_A ....
Probab=23.93 E-value=1.6e+02 Score=21.55 Aligned_cols=30 Identities=37% Similarity=0.578 Sum_probs=23.2
Q ss_pred HHHHHHHHHHHhHhcCCC-CcHHHHHHHHHH
Q 026256 123 GRLAAQVLEYAGTLVKPG-ITTDEIDKAVHQ 152 (241)
Q Consensus 123 ~~ia~~~l~~a~~~IkpG-vTe~EId~~v~~ 152 (241)
.++....+.++..++..| .|..|||.++..
T Consensus 5 nRl~~~~~~ea~~l~~egvas~~~ID~~~~~ 35 (97)
T PF00725_consen 5 NRLLAALLNEAARLVEEGVASPEDIDRAMRY 35 (97)
T ss_dssp HHHHHHHHHHHHHHHHTTSSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 456666777788888888 788999988775
No 94
>PRK10144 formate-dependent nitrite reductase complex subunit NrfF; Provisional
Probab=21.75 E-value=1.2e+02 Score=24.76 Aligned_cols=29 Identities=17% Similarity=0.100 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHhHhcCCCCcHHHHHHHHH
Q 026256 123 GRLAAQVLEYAGTLVKPGITTDEIDKAVH 151 (241)
Q Consensus 123 ~~ia~~~l~~a~~~IkpGvTe~EId~~v~ 151 (241)
+.+|.+.-..+.+.+..|.|.+||-..+.
T Consensus 56 a~iA~dmR~~Vr~~i~~G~sd~eI~~~~v 84 (126)
T PRK10144 56 APVAVSMRHQVYSMVAEGKSEVEIIGWMT 84 (126)
T ss_pred CHHHHHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 36888999999999999999999876543
No 95
>PRK07440 hypothetical protein; Provisional
Probab=21.08 E-value=2.4e+02 Score=20.10 Aligned_cols=29 Identities=24% Similarity=0.360 Sum_probs=21.3
Q ss_pred ceeeecCCCcccc-cCCCCCccCCCCeEEE
Q 026256 171 KSVCTSVNECICH-GIPDSRALEDGDTINI 199 (241)
Q Consensus 171 ~~V~tg~N~~i~H-g~P~~r~Lq~GDiV~I 199 (241)
..+..-.|..+.+ ....+..|++||.|-|
T Consensus 34 ~~vav~~N~~iv~r~~w~~~~L~~gD~IEI 63 (70)
T PRK07440 34 RLVAVEYNGEILHRQFWEQTQVQPGDRLEI 63 (70)
T ss_pred CeEEEEECCEEeCHHHcCceecCCCCEEEE
Confidence 4567778877654 3457889999998876
No 96
>TIGR01765 tspaseT_teng_N transposase, putative, N-terminal domain. This model represents the N-terminal region of a family of putative transposases found in the largest copy number in Thermoanaerobacter tengcongensis. The three homologs in Bacillus anthracis are each split into two ORFs and This model represents the upstream ORF.
Probab=21.07 E-value=3.2e+02 Score=19.47 Aligned_cols=46 Identities=13% Similarity=0.155 Sum_probs=35.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHH
Q 026256 111 HDEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIID 156 (241)
Q Consensus 111 Ks~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~ 156 (241)
-++++-+.+.+..+.-..+..++.+.+..|.+..|+...++..+..
T Consensus 8 ~~~e~~~~L~~tm~~f~~A~n~~~~~~~e~~~~~~~k~~L~~l~y~ 53 (73)
T TIGR01765 8 FEDKEKEYLLDLIRAFSSAVNFVIKRLLEGKSHSELKKELQRLYYL 53 (73)
T ss_pred cChhhHHHHHHHHHHHHHHHHHHHHHHHCCCChhHHHHHHHHHHhh
Confidence 3455558888888888889999988888899888777776665543
No 97
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=20.21 E-value=3.7e+02 Score=25.87 Aligned_cols=51 Identities=14% Similarity=0.288 Sum_probs=47.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHhHhcCCCCcHHHHHHHHHHHHHHcCCCCC
Q 026256 112 DEKGIECMRVSGRLAAQVLEYAGTLVKPGITTDEIDKAVHQMIIDNGAYPS 162 (241)
Q Consensus 112 s~~EIe~mR~A~~ia~~~l~~a~~~IkpGvTe~EId~~v~~~i~~~Ga~ps 162 (241)
|+.||+-+-++-..-...+..-...+-|..++.||...++..+.+.-+.|.
T Consensus 98 s~~El~FLa~vP~~m~~~L~~~l~~~~p~l~~~~i~~~~~~sVldt~~SPT 148 (381)
T PF09506_consen 98 SDAELAFLAAVPERMEALLKEFLPAILPELSQEEIEKLIEASVLDTRVSPT 148 (381)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhhCcccCHHHHHHHHHHHHhcCCCCCc
Confidence 789999999999999999999999999999999999999999999888873
Done!