BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026258
(241 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9MAK9|PS10B_ARATH 26S protease regulatory subunit S10B homolog B OS=Arabidopsis
thaliana GN=RPT4B PE=2 SV=1
Length = 399
Score = 469 bits (1208), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/235 (97%), Positives = 232/235 (98%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLR
Sbjct: 108 MTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLR 167
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF Y
Sbjct: 168 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNY 227
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
AR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR
Sbjct: 228 AREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 287
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA+GIAKHGEIDYEA+VKL E
Sbjct: 288 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHASGIAKHGEIDYEAIVKLGE 342
>sp|Q9SEI3|PS10A_ARATH 26S protease regulatory subunit 10B homolog A OS=Arabidopsis
thaliana GN=RPT4A PE=2 SV=1
Length = 399
Score = 469 bits (1207), Expect = e-132, Method: Compositional matrix adjust.
Identities = 228/235 (97%), Positives = 232/235 (98%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMRALPREVDPVVYNMLHEDPGN+SYSAVGGL DQIRELRESIELPLMNPELFLR
Sbjct: 108 MTTLTIMRALPREVDPVVYNMLHEDPGNISYSAVGGLGDQIRELRESIELPLMNPELFLR 167
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMF Y
Sbjct: 168 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNY 227
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
AR+HQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGKVKMIMATNR
Sbjct: 228 AREHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDNLGKVKMIMATNR 287
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
PDVLDPALLRPGRLDRKIEIPLPNEQSRM+ILKIHAAGIAKHGEIDYEA+VKLAE
Sbjct: 288 PDVLDPALLRPGRLDRKIEIPLPNEQSRMDILKIHAAGIAKHGEIDYEAIVKLAE 342
>sp|O17071|PRS10_CAEEL Probable 26S protease regulatory subunit 10B OS=Caenorhabditis
elegans GN=rpt-4 PE=1 SV=2
Length = 406
Score = 424 bits (1089), Expect = e-118, Method: Compositional matrix adjust.
Identities = 200/235 (85%), Positives = 218/235 (92%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VY M HEDPGN+SYS VGGL++QIRELRE +ELPL+NPELF R
Sbjct: 119 MTTLTIMRQLPREVDPLVYKMSHEDPGNISYSDVGGLAEQIRELREVVELPLINPELFKR 178
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LL+GPPGTGKTLLARA+AS +D NFLKVVSSAI+DKYIGESAR+IREMF Y
Sbjct: 179 VGITPPKGCLLFGPPGTGKTLLARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNY 238
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCI+FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFD LGKVK+IMATNR
Sbjct: 239 ARDHQPCIVFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNR 298
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
PD LDPALLRPGRLDRKIEI LPNEQSR+EILKIH+ I KHGEID+EAVVKL++
Sbjct: 299 PDTLDPALLRPGRLDRKIEIGLPNEQSRLEILKIHSNKITKHGEIDFEAVVKLSD 353
>sp|P62335|PRS10_SPETR 26S protease regulatory subunit 10B OS=Spermophilus
tridecemlineatus GN=PSMC6 PE=2 SV=1
Length = 389
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/235 (85%), Positives = 216/235 (91%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 161
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 281
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++
Sbjct: 282 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSD 336
>sp|P62334|PRS10_MOUSE 26S protease regulatory subunit 10B OS=Mus musculus GN=Psmc6 PE=1
SV=1
Length = 389
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/235 (85%), Positives = 216/235 (91%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 161
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 281
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++
Sbjct: 282 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSD 336
>sp|P62333|PRS10_HUMAN 26S protease regulatory subunit 10B OS=Homo sapiens GN=PSMC6 PE=1
SV=1
Length = 389
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/235 (85%), Positives = 216/235 (91%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 161
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 281
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++
Sbjct: 282 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSD 336
>sp|Q2KIW6|PRS10_BOVIN 26S protease regulatory subunit 10B OS=Bos taurus GN=PSMC6 PE=2
SV=1
Length = 389
Score = 421 bits (1081), Expect = e-117, Method: Compositional matrix adjust.
Identities = 201/235 (85%), Positives = 216/235 (91%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM HEDPGNVSYS +GGLS+QIRELRE IELPL NPELF R
Sbjct: 102 MTTLTIMRYLPREVDPLVYNMSHEDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQR 161
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGI PPKG LLYGPPGTGKTLLARA+AS +D NFLKVVSS+I+DKYIGESARLIREMF Y
Sbjct: 162 VGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L +VKMIMATNR
Sbjct: 222 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRVKMIMATNR 281
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
PD LDPALLRPGRLDRKI I LPNEQ+R++ILKIHA I KHGEIDYEA+VKL++
Sbjct: 282 PDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGPITKHGEIDYEAIVKLSD 336
>sp|O74445|PRS10_SCHPO Probable 26S protease subunit rpt4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=rpt4 PE=3 SV=2
Length = 388
Score = 407 bits (1047), Expect = e-113, Method: Compositional matrix adjust.
Identities = 193/235 (82%), Positives = 217/235 (92%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
MTTLTIMR LPREVDP+VYNM EDPG++S++ VGGL++QIRELRE IELPL NPELFLR
Sbjct: 101 MTTLTIMRILPREVDPLVYNMSIEDPGDISFAGVGGLNEQIRELREVIELPLKNPELFLR 160
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGIKPPKGVLLYGPPGTGKTLLARA+A+++ NFLKVVSSAI+DKYIGESAR+IREMFGY
Sbjct: 161 VGIKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGY 220
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
A++H+PC+IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD LG+ K+IMATNR
Sbjct: 221 AKEHEPCVIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDYLGQTKIIMATNR 280
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
PD LDPALLRPGRLDRKIEIPLPNE RMEILKIH ++K GEIDYEA+VKL +
Sbjct: 281 PDTLDPALLRPGRLDRKIEIPLPNEVGRMEILKIHLEKVSKQGEIDYEALVKLTD 335
>sp|Q54PJ1|PRS10_DICDI 26S protease regulatory subunit 10B OS=Dictyostelium discoideum
GN=psmC6 PE=1 SV=1
Length = 393
Score = 403 bits (1036), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/228 (82%), Positives = 212/228 (92%)
Query: 8 RALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPK 67
+ LPREVDP+++NM E PG+VSY +GGLS+QIRELRE +ELPLM PELF+RVGIK PK
Sbjct: 113 KILPREVDPIIFNMTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPK 172
Query: 68 GVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPC 127
GVLLYGPPGTGKTLLARAIASN++ANFLKVVSSAI+DKYIGESAR+IREMFGYARDHQPC
Sbjct: 173 GVLLYGPPGTGKTLLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPC 232
Query: 128 IIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPA 187
+IFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQ+DGFD L KVK+IMATNRPDVLDPA
Sbjct: 233 VIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPA 292
Query: 188 LLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
LLRPGRLDRKIEIPLPNE R+++LKIHAA I KHG++DYEA+ KLA+
Sbjct: 293 LLRPGRLDRKIEIPLPNEAGRVDVLKIHAANITKHGDVDYEAIAKLAD 340
>sp|P53549|PRS10_YEAST 26S protease subunit RPT4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPT4 PE=1 SV=4
Length = 437
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 172/235 (73%), Positives = 203/235 (86%)
Query: 1 MTTLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLR 60
+TTLTIMR LPRE DP+VYNM + G +++ +GGL++QIRELRE IELPL NPE+F R
Sbjct: 150 ITTLTIMRILPRETDPLVYNMTSFEQGEITFDGIGGLTEQIRELREVIELPLKNPEIFQR 209
Query: 61 VGIKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGY 120
VGIKPPKGVLLYGPPGTGKTLLA+A+A+ I ANF+ +S I+DKYIGESAR+IREMF Y
Sbjct: 210 VGIKPPKGVLLYGPPGTGKTLLAKAVAATIGANFIFSPASGIVDKYIGESARIIREMFAY 269
Query: 121 ARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNR 180
A++H+PCIIFMDE+DAIGGRRFSEGTSADREIQRTLMELL Q+DGFD LG+ K+IMATNR
Sbjct: 270 AKEHEPCIIFMDEVDAIGGRRFSEGTSADREIQRTLMELLTQMDGFDNLGQTKIIMATNR 329
Query: 181 PDVLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
PD LDPALLRPGRLDRK+EIPLPNE R+EI KIH A + K GE D+EA VK+++
Sbjct: 330 PDTLDPALLRPGRLDRKVEIPLPNEAGRLEIFKIHTAKVKKTGEFDFEAAVKMSD 384
>sp|O26824|PAN_METTH Proteasome-activating nucleotidase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=pan PE=3 SV=1
Length = 410
Score = 288 bits (736), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 133/233 (57%), Positives = 176/233 (75%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
T +I+ LP E DPVV M E+ +VSY +GGL +Q+RE++E++ELPL PELF ++G
Sbjct: 122 TFSIVDVLPSEKDPVVTGMEVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIG 181
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I+PPKGVLLYGPPGTGKTLLA+A+A +A F+K+V+S + KYIGE ARL+R +F A+
Sbjct: 182 IEPPKGVLLYGPPGTGKTLLAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAK 241
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ P IIF+DEIDA+ +R TS DRE+QRTLM+LL +LDGF+ G V ++ ATNRPD
Sbjct: 242 EKSPSIIFIDEIDAVAAKRLKSSTSGDREVQRTLMQLLAELDGFESRGNVGIVAATNRPD 301
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
+LDPALLRPGR DR IE+PLPNE R EILKIH +G+A E+D E + ++ +
Sbjct: 302 ILDPALLRPGRFDRFIEVPLPNEDGRREILKIHTSGMALAEEVDIELLARITD 354
>sp|Q5R8D7|PRS7_PONAB 26S protease regulatory subunit 7 OS=Pongo abelii GN=PSMC2 PE=2
SV=3
Length = 433
Score = 275 bits (702), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 126/225 (56%), Positives = 170/225 (75%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRKIE LP+ + R ILKIHA ++ +I +E + +L
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHILKIHARSMSVERDIRFELLARLC 377
>sp|Q18787|PRS7_CAEEL 26S protease regulatory subunit 7 OS=Caenorhabditis elegans
GN=rpt-1 PE=1 SV=1
Length = 435
Score = 274 bits (701), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 169/225 (75%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG DQI +LRE +E PL++PE ++ +GI+PPKGV
Sbjct: 155 LPAKIDPTVTMMQVEEKPDVTYSDVGGCKDQIEKLREVVETPLLHPERYVNLGIEPPKGV 214
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LLYGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 215 LLYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 274
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDA+GG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 275 FFDEIDAVGGARFDDGQGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 334
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRK+E LP+ R ILKIHA ++ +I Y+ + +L
Sbjct: 335 RPGRLDRKVEFALPDLAGRAHILKIHAKQMSVERDIRYDLLARLC 379
>sp|P46471|PRS7_MOUSE 26S protease regulatory subunit 7 OS=Mus musculus GN=Psmc2 PE=1
SV=5
Length = 433
Score = 273 bits (699), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 169/225 (75%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLC 377
>sp|Q4R4R0|PRS7_MACFA 26S protease regulatory subunit 7 OS=Macaca fascicularis GN=PSMC2
PE=2 SV=3
Length = 433
Score = 273 bits (698), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 169/225 (75%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLC 377
>sp|P35998|PRS7_HUMAN 26S protease regulatory subunit 7 OS=Homo sapiens GN=PSMC2 PE=1
SV=3
Length = 433
Score = 273 bits (698), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 169/225 (75%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLC 377
>sp|Q5E9F9|PRS7_BOVIN 26S protease regulatory subunit 7 OS=Bos taurus GN=PSMC2 PE=2 SV=3
Length = 433
Score = 273 bits (698), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 169/225 (75%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLC 377
>sp|P46472|PRS7_XENLA 26S protease regulatory subunit 7 OS=Xenopus laevis GN=psmc2 PE=2
SV=1
Length = 433
Score = 273 bits (698), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 169/225 (75%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLC 377
>sp|O64982|PRS7_PRUPE 26S protease regulatory subunit 7 OS=Prunus persica GN=RPT1 PE=2
SV=1
Length = 425
Score = 273 bits (698), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 170/225 (75%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGV
Sbjct: 145 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 204
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
L YGPPGTGKTLLARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+
Sbjct: 205 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 264
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DE+DAIGG RF +G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALL
Sbjct: 265 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 324
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRK+E LP+ +SR +I KIH + +I +E + +L
Sbjct: 325 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLC 369
>sp|Q9SSB5|PRS7A_ARATH 26S protease regulatory subunit 7 homolog A OS=Arabidopsis thaliana
GN=RPT1A PE=2 SV=1
Length = 426
Score = 273 bits (697), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 122/225 (54%), Positives = 170/225 (75%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGV
Sbjct: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
L YGPPGTGKTLLARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+
Sbjct: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DE+DAIGG RF +G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALL
Sbjct: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRK+E LP+ +SR +I KIH + +I +E + +L
Sbjct: 326 RPGRLDRKVEFGLPDLESRTQIFKIHTRTMNCERDIRFELLARLC 370
>sp|Q63347|PRS7_RAT 26S protease regulatory subunit 7 OS=Rattus norvegicus GN=Psmc2
PE=1 SV=3
Length = 433
Score = 272 bits (695), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 125/225 (55%), Positives = 168/225 (74%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+YS VGG +QI +LRE +E PL++PE F+ +GI+PPKGV
Sbjct: 153 LPPKIDPTVTMMQVEEKPDVTYSDVGGCKEQIEKLREVVETPLLHPERFVNLGIEPPKGV 212
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LL+GPPGTGKTL ARA+A+ DA F+ V+ S ++ KY+GE AR++RE+F AR + C+I
Sbjct: 213 LLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMVRELFEMARTKKACLI 272
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPAL+
Sbjct: 273 FFDEIDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALM 332
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRKIE LP+ + R I KIHA ++ +I +E + +L
Sbjct: 333 RPGRLDRKIEFSLPDLEGRTHIFKIHARSMSVERDIRFELLARLC 377
>sp|Q41365|PRS7_SPIOL 26S protease regulatory subunit 7 OS=Spinacia oleracea GN=RPT1 PE=2
SV=1
Length = 426
Score = 271 bits (693), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 169/225 (75%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGV
Sbjct: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
L YGPPGTGKTLLARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+
Sbjct: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DE+DAIGG RF +G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALL
Sbjct: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRK+E LP+ + R +I KIH + +I +E + +L
Sbjct: 326 RPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLC 370
>sp|Q9FXT9|PRS7_ORYSJ 26S protease regulatory subunit 7 OS=Oryza sativa subsp. japonica
GN=RPT1A PE=2 SV=1
Length = 426
Score = 271 bits (693), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 169/225 (75%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+Y+ VGG +QI ++RE +ELP+++PE F+++GI PPKGV
Sbjct: 146 LPPKIDPSVTMMTVEEKPDVTYNDVGGCKEQIEKMREVVELPMLHPEKFVKLGIDPPKGV 205
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
L YGPPGTGKTLLARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CI+
Sbjct: 206 LCYGPPGTGKTLLARAVANRTDACFIRVIGSELVQKYVGEGARMVRELFQMARSKKACIV 265
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DE+DAIGG RF +G D E+QRT++E++NQLDGFD G +K++MATNRPD LDPALL
Sbjct: 266 FFDEVDAIGGARFDDGVGGDNEVQRTMLEIVNQLDGFDARGNIKVLMATNRPDTLDPALL 325
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRK+E LP+ + R +I KIH + +I +E + +L
Sbjct: 326 RPGRLDRKVEFGLPDLEGRTQIFKIHTRTMNCERDIRFELLARLC 370
>sp|Q6LWR0|PAN_METMP Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain S2 / LL) GN=pan PE=3 SV=1
Length = 407
Score = 271 bits (693), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 174/233 (74%), Gaps = 1/233 (0%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
TL I+ LP+E D M E+ ++S+ +GGL++QIR+++E +ELPL NPELF +VG
Sbjct: 119 TLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVG 178
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PPKGVLLYGPPGTGKTLLA+A+A +A+F++VV S ++ K+IGE A+L+R++F A+
Sbjct: 179 IVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAK 238
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ PCIIF+DEIDA+ +R T DRE+QRTLM+LL ++DGFD G VK+I ATNRPD
Sbjct: 239 EKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPD 298
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
+LDPA+LRPGR DR IEI +P+E R+EILKIH + G +D V K+AE
Sbjct: 299 ILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLKG-VDLREVAKIAE 350
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 271 bits (693), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 170/233 (72%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
TL I+ LP DP+VY E+ VSY +GGL QI E+RE++ELPL+ PELF VG
Sbjct: 112 TLAIVNVLPTSKDPMVYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEVG 171
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I+PPKGVLLYGPPGTGKTLLA+A+A+ A F++VV S + KYIGE ARL+RE+F A+
Sbjct: 172 IEPPKGVLLYGPPGTGKTLLAKAVANQTRATFIRVVGSEFVQKYIGEGARLVREVFQLAK 231
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ P IIF+DE+DAI RR + TS DRE+QRT+M+LL +LDGFD G VK+I ATNR D
Sbjct: 232 EKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQLLAELDGFDPRGDVKVIGATNRID 291
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
+LDPA+LRPGR DR IE+PLP + R++I KIH + ++D++ + ++ E
Sbjct: 292 ILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFKELARITE 344
>sp|A9A916|PAN_METM6 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C6 / ATCC BAA-1332) GN=pan PE=3 SV=1
Length = 407
Score = 270 bits (691), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 174/233 (74%), Gaps = 1/233 (0%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
TL I+ LP+E D M E+ ++S+ +GGL++QIR+++E +ELPL NPELF +VG
Sbjct: 119 TLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVG 178
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PPKGVLLYGPPGTGKTLLA+A+A +A+F++VV S ++ K+IGE A+L+R++F A+
Sbjct: 179 IVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAK 238
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ PCIIF+DEIDA+ +R T DRE+QRTLM+LL ++DGFD G VK+I ATNRPD
Sbjct: 239 EKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPD 298
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
+LDPA+LRPGR DR IEI +P+E R++ILKIH + G +D V KLAE
Sbjct: 299 ILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNLKG-VDLREVAKLAE 350
>sp|A6VHR1|PAN_METM7 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C7 / ATCC BAA-1331) GN=pan PE=3 SV=1
Length = 407
Score = 270 bits (690), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 173/233 (74%), Gaps = 1/233 (0%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
TL I+ LP+E D M E+ ++S+ +GGL++QIR+++E +ELPL NPELF +VG
Sbjct: 119 TLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVG 178
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PPKGVLLYGPPGTGKTLLA+A+A +A+F++VV S ++ K+IGE A+L+R++F A+
Sbjct: 179 IVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAK 238
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ PCIIF+DEIDA+ +R T DRE+QRTLM+LL ++DGFD G VK+I ATNRPD
Sbjct: 239 EKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPD 298
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
+LDPA+LRPGR DR IEI +P+E R+EILKIH + +D V KLAE
Sbjct: 299 ILDPAILRPGRFDRIIEISMPDEDGRLEILKIHTEKMNLKN-VDLREVAKLAE 350
>sp|A4G0S4|PAN_METM5 Proteasome-activating nucleotidase OS=Methanococcus maripaludis
(strain C5 / ATCC BAA-1333) GN=pan PE=3 SV=1
Length = 407
Score = 270 bits (689), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 128/233 (54%), Positives = 174/233 (74%), Gaps = 1/233 (0%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
TL I+ LP+E D M E+ ++S+ +GGL++QIR+++E +ELPL NPELF +VG
Sbjct: 119 TLAIVEVLPKEKDYRAMAMEIEEKPDISFEDIGGLNNQIRDIKEVVELPLKNPELFEKVG 178
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PPKGVLLYGPPGTGKTLLA+A+A +A+F++VV S ++ K+IGE A+L+R++F A+
Sbjct: 179 IVPPKGVLLYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAK 238
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ PCIIF+DEIDA+ +R T DRE+QRTLM+LL ++DGFD G VK+I ATNRPD
Sbjct: 239 EKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPD 298
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
+LDPA+LRPGR DR IEI +P+E R++ILKIH + G +D V K+AE
Sbjct: 299 ILDPAILRPGRFDRIIEISMPDEDGRLDILKIHTEKMNLKG-VDLREVAKIAE 350
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 269 bits (688), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 126/233 (54%), Positives = 172/233 (73%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
++ ++ LP E D V M ++ +VSY +GGL +QIRE+RE +E PL PELF +VG
Sbjct: 150 SMAVVDVLPSEKDSRVLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVG 209
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
++PPKGVLLYGPPGTGKTLLA+A+A++ DA F+++ + ++ K+IGE ARL+RE+F AR
Sbjct: 210 VEPPKGVLLYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELFELAR 269
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ P IIF+DEIDAIG RR + TS DRE+QRTL +LL ++DGFD L +K+I ATNR D
Sbjct: 270 EKAPSIIFIDEIDAIGARRMRDATSGDREVQRTLTQLLAEMDGFDPLDDIKVIAATNRKD 329
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
+LDPALLRPGR DR I+IPLP+E+ R EI KIH + ++D + + K+ E
Sbjct: 330 ILDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQKLAKITE 382
>sp|B6YXR2|PAN_THEON Proteasome-activating nucleotidase OS=Thermococcus onnurineus
(strain NA1) GN=pan PE=3 SV=1
Length = 398
Score = 267 bits (682), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 130/233 (55%), Positives = 172/233 (73%), Gaps = 1/233 (0%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
T+ I+ LP E DP V + VSY+ +GGL Q++ELRE+IELPL +PELF +VG
Sbjct: 110 TMAIVELLPSEKDPSVLGFEVIERPTVSYNDIGGLDKQLQELREAIELPLKHPELFEKVG 169
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I+PPKGVLLYGPPG GKTL+A+A+A ++A F++VV S ++ K+IGE ARL+ E+F A+
Sbjct: 170 IEPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKFIGEGARLVHELFELAK 229
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ P IIF+DEIDAIG +R E T +RE+ RTLM+LL ++DGFD G VK+I ATNRPD
Sbjct: 230 EKAPAIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPSGNVKIIAATNRPD 289
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
+LDPALLRPGR DR IE+PLPN +SR+EILKIH + G +D + ++ E
Sbjct: 290 ILDPALLRPGRFDRLIEVPLPNFKSRLEILKIHTKRMNLKG-VDLRIIAEMTE 341
>sp|P33299|PRS7_YEAST 26S protease regulatory subunit 7 homolog OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=RPT1 PE=1
SV=1
Length = 467
Score = 267 bits (682), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 164/225 (72%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP +DP V M E+ +V+YS VGG DQI +LRE +ELPL++PE F +GI PPKG+
Sbjct: 187 LPPRIDPSVTMMTVEEKPDVTYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGI 246
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
LLYGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CII
Sbjct: 247 LLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII 306
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDA+GG RF +G D E+QRT++EL+ QLDGFD G +K++ ATNRP+ LDPALL
Sbjct: 307 FFDEIDAVGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVMFATNRPNTLDPALL 366
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGR+DRK+E LP+ + R I +IH+ ++ I +E + +L
Sbjct: 367 RPGRIDRKVEFSLPDLEGRANIFRIHSKSMSVERGIRWELISRLC 411
>sp|Q9SSB4|PRS7B_ARATH 26S protease regulatory subunit 7 homolog B OS=Arabidopsis thaliana
GN=RPT1B PE=2 SV=2
Length = 464
Score = 266 bits (680), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 121/225 (53%), Positives = 168/225 (74%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ + +YS +GG +QI ++RE +ELP+++PE F+R+GI PPKGV
Sbjct: 183 LPPKIDPSVTMMTVEEKPDATYSDIGGCKEQIEKIREVVELPMLHPEKFVRLGIDPPKGV 242
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
L YGPPG+GKTL+ARA+A+ A F++VV S ++ KYIGE AR++RE+F AR + CI+
Sbjct: 243 LCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKACIL 302
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G +D E+QRT++E+L QLDGFD G +K++MATNRPD+LDPALL
Sbjct: 303 FFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLDGFDARGNIKVLMATNRPDILDPALL 362
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRK+E LP+ + R +I KIH ++ +I +E + L
Sbjct: 363 RPGRLDRKVEFCLPDLEGRTQIFKIHTRTMSCERDIRFELLAGLC 407
>sp|P54814|PRS8_MANSE 26S protease regulatory subunit 8 OS=Manduca sexta PE=2 SV=1
Length = 402
Score = 266 bits (679), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 165/214 (77%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
+ T+ + LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +G
Sbjct: 116 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALG 175
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PKGVLLYGPPGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 176 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 235
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D
Sbjct: 236 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRID 295
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA 216
+LDPALLRPGR+DRKIE P PNE++R++ILKIH+
Sbjct: 296 ILDPALLRPGRIDRKIEFPPPNEEARLDILKIHS 329
>sp|O18413|PRS8_DROME 26S protease regulatory subunit 8 OS=Drosophila melanogaster
GN=Pros45 PE=1 SV=2
Length = 405
Score = 266 bits (679), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 165/214 (77%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
+ T+ + LP +VDP+V M+ E + +Y VGGL QI+E++E IELP+ +PELF +G
Sbjct: 119 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALG 178
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PKGVLLYGPPGTGKTLLARA+A + + F++V S ++ K+IGE +R++RE+F AR
Sbjct: 179 IAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAR 238
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D
Sbjct: 239 EHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRID 298
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA 216
+LDPALLRPGR+DRKIE P PNE++R++ILKIH+
Sbjct: 299 ILDPALLRPGRIDRKIEFPPPNEEARLDILKIHS 332
>sp|Q980M1|PAN_SULSO Proteasome-activating nucleotidase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=pan
PE=3 SV=1
Length = 393
Score = 266 bits (679), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 129/231 (55%), Positives = 170/231 (73%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
TI+ LP++ DP+V M + NV+YS +GGL +QIRELRE +ELPL NPE+F +G++
Sbjct: 107 TILEVLPQKEDPIVKTMEIIERPNVTYSEIGGLEEQIRELREVVELPLKNPEIFREIGVE 166
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PPKGVLLYGPPGTGKT+LA+A+A+ +A F+ VV+S K++GE AR++RE+F A+
Sbjct: 167 PPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRK 226
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIF+DEIDAIG +R GTS +REIQRTLM+LL +LDGFD L VK+I ATNR D+L
Sbjct: 227 APSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFDPLDNVKIIAATNRIDIL 286
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
DPALLRPGR DR IE+PLP+ + R EI I+ + I+ E + +L E
Sbjct: 287 DPALLRPGRFDRIIEVPLPDFKGRTEIFNIYLKKMKIEDNINLELLSQLTE 337
>sp|O42931|PRS7_SCHPO 26S protease regulatory subunit 7 homolog OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=rpt1 PE=1 SV=2
Length = 438
Score = 265 bits (678), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 166/225 (73%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++DP V M E+ +V+Y VGG +QI LRE +ELPL++PE F+++GI PPKG+
Sbjct: 157 LPPKIDPSVTMMQVEEKPDVTYGDVGGCKEQIERLREVVELPLLSPERFVKLGIDPPKGI 216
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
+LYGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++RE+F AR + CII
Sbjct: 217 MLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGARMVRELFEMARTKKACII 276
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DEIDAIGG RF +G D E+QRT++EL+ QLDGFD G +K++ ATNRP+ LD AL+
Sbjct: 277 FFDEIDAIGGARFDDGAGGDNEVQRTMLELITQLDGFDPRGNIKVLFATNRPNTLDEALM 336
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGR+DRK+E LP+ + R IL+IHA +A +I +E + +L
Sbjct: 337 RPGRIDRKVEFGLPDLEGRAHILRIHAKSMAIDKDIRWELIARLC 381
>sp|Q8SQK0|PRS8_ENCCU 26S protease regulatory subunit 8 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=RPT6 PE=1 SV=1
Length = 453
Score = 265 bits (677), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 127/225 (56%), Positives = 165/225 (73%)
Query: 6 IMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKP 65
+ R LP +VDP+V M+ E + +Y +GGL +QI+E+RE IELP+ +PELF +GI
Sbjct: 170 VHRILPTKVDPLVSLMMVEKVPDSTYQMIGGLDEQIKEIREVIELPIKHPELFENLGIAQ 229
Query: 66 PKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQ 125
PKGVLLYGPPGTGKTLLARA+A + F++V S ++ KYIGE +RL+RE+F AR+H
Sbjct: 230 PKGVLLYGPPGTGKTLLARAVAHHTQCKFIRVSGSELVQKYIGEGSRLVRELFIMAREHA 289
Query: 126 PCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLD 185
P IIFMDEID+IG R +D E+QRT++ELLNQLDGF+ +K+IMATNR D+LD
Sbjct: 290 PSIIFMDEIDSIGSTRGDSNKGSDSEVQRTMLELLNQLDGFESHNNIKVIMATNRIDILD 349
Query: 186 PALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAV 230
PALLR GR+DRKIE P PNE +R+EILKIH+ + ID E +
Sbjct: 350 PALLRTGRIDRKIEFPPPNESARLEILKIHSRKMNLTKGIDLETI 394
>sp|Q86JA1|PRS7_DICDI 26S protease regulatory subunit 7 OS=Dictyostelium discoideum
GN=psmC2 PE=1 SV=1
Length = 428
Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 166/225 (73%)
Query: 10 LPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGV 69
LP ++D V M E+ +++Y VGG +QI +LRE +E+PL++PE F+ +GI PPKGV
Sbjct: 148 LPPKIDASVTMMQVEEKPDITYKDVGGCKEQIEKLREVVEMPLLHPEKFVNLGIDPPKGV 207
Query: 70 LLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDHQPCII 129
L+YGPPGTGKTL ARA+A+ DA F++V+ S ++ KY+GE AR++R++F AR + CII
Sbjct: 208 LMYGPPGTGKTLCARAVANRTDAAFVRVIGSELVQKYVGEGARMVRDLFQMARSKKACII 267
Query: 130 FMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVLDPALL 189
F DE+DAIGG RF +G D E+QRT++EL+NQLDGFD G +K++MATNRPD LDPALL
Sbjct: 268 FFDEVDAIGGARFDDGAGGDNEVQRTMLELINQLDGFDPRGNIKVLMATNRPDTLDPALL 327
Query: 190 RPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLA 234
RPGRLDRK+E LP+ + R I IHA ++ +I +E + +L
Sbjct: 328 RPGRLDRKVEFGLPDLEGRAHIFTIHAKTMSCARDIRFELLARLC 372
>sp|P62198|PRS8_RAT 26S protease regulatory subunit 8 OS=Rattus norvegicus GN=Psmc5
PE=1 SV=1
Length = 406
Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 164/214 (76%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
+ T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +G
Sbjct: 120 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALG 179
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR
Sbjct: 180 IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR 239
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D
Sbjct: 240 EHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRID 299
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA 216
+LD ALLRPGR+DRKIE P PNE++R++ILKIH+
Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 333
>sp|P62197|PRS8_PIG 26S protease regulatory subunit 8 OS=Sus scrofa GN=PSMC5 PE=2 SV=1
Length = 406
Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 164/214 (76%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
+ T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +G
Sbjct: 120 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALG 179
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR
Sbjct: 180 IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR 239
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D
Sbjct: 240 EHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRID 299
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA 216
+LD ALLRPGR+DRKIE P PNE++R++ILKIH+
Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 333
>sp|P62196|PRS8_MOUSE 26S protease regulatory subunit 8 OS=Mus musculus GN=Psmc5 PE=1
SV=1
Length = 406
Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 164/214 (76%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
+ T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +G
Sbjct: 120 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALG 179
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR
Sbjct: 180 IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR 239
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D
Sbjct: 240 EHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRID 299
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA 216
+LD ALLRPGR+DRKIE P PNE++R++ILKIH+
Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 333
>sp|P62195|PRS8_HUMAN 26S protease regulatory subunit 8 OS=Homo sapiens GN=PSMC5 PE=1
SV=1
Length = 406
Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 164/214 (76%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
+ T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +G
Sbjct: 120 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALG 179
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR
Sbjct: 180 IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR 239
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D
Sbjct: 240 EHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRID 299
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA 216
+LD ALLRPGR+DRKIE P PNE++R++ILKIH+
Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 333
>sp|P62194|PRS8_BOVIN 26S protease regulatory subunit 8 OS=Bos taurus GN=PSMC5 PE=2 SV=1
Length = 406
Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 123/214 (57%), Positives = 164/214 (76%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
+ T+ + LP +VDP+V M+ E + +Y +GGL QI+E++E IELP+ +PELF +G
Sbjct: 120 SYTLHKILPNKVDPLVSLMMVEKVPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALG 179
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PKGVLLYGPPGTGKTLLARA+A + D F++V S ++ K+IGE AR++RE+F AR
Sbjct: 180 IAQPKGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAR 239
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+H P IIFMDEID+IG R G+ D E+QRT++ELLNQLDGF+ +K+IMATNR D
Sbjct: 240 EHAPSIIFMDEIDSIGSSRLEGGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRID 299
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHA 216
+LD ALLRPGR+DRKIE P PNE++R++ILKIH+
Sbjct: 300 ILDSALLRPGRIDRKIEFPPPNEEARLDILKIHS 333
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 173/233 (74%), Gaps = 1/233 (0%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
T+ I+ LP E DP V + V+Y+ +GGL Q++ELRE+IELPL +PELF +VG
Sbjct: 109 TMAIVELLPSEKDPSVLGFEVIERPKVTYNDIGGLEKQLQELREAIELPLKHPELFEQVG 168
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I+PPKGVLLYGPPG GKTL+A+A+A++++A F++VV S ++ K+IGE ARL+ E+F A+
Sbjct: 169 IEPPKGVLLYGPPGCGKTLMAKAVANHVNATFIRVVGSELVRKFIGEGARLVHELFELAK 228
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ P IIF+DEIDAIG +R E T +RE+ RTLM+LL ++DGFD G VK+I ATNRPD
Sbjct: 229 EKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPD 288
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
+LDPALLRPGR DR IE+PLP+ Q R+EILK+H + G +D + ++ E
Sbjct: 289 ILDPALLRPGRFDRLIEVPLPDYQGRLEILKVHTRKMNLKG-VDLRVIAEITE 340
>sp|Q0W257|PAN_UNCMA Proteasome-activating nucleotidase OS=Uncultured methanogenic
archaeon RC-I GN=pan PE=3 SV=1
Length = 417
Score = 265 bits (676), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 121/235 (51%), Positives = 171/235 (72%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
+L ++ LP DP V M D + Y ++GGL QI EL+E++ELPL+ PELF +VG
Sbjct: 130 SLAVIEVLPTVKDPSVLGMEVVDSPEIDYQSIGGLEAQINELKETVELPLLKPELFQKVG 189
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I+PPKGVLLYGPPGTGKTLLA+A+A+ A F++++ S ++ KYIGE AR++RE+F A+
Sbjct: 190 IEPPKGVLLYGPPGTGKTLLAKAVANRTKATFIRIIGSELVQKYIGEGARMVRELFELAK 249
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ P IIF+DEID+IG +R TS DRE+QRTL++LL ++DGFD G V+++ ATNRPD
Sbjct: 250 EKSPSIIFIDEIDSIGAKRLDSITSGDREVQRTLVQLLAEMDGFDPRGNVRILAATNRPD 309
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAEVS 237
+LDPALLRPGR DR I++P+P ++R +ILKIHA + ++D + + + S
Sbjct: 310 ILDPALLRPGRFDRMIKVPMPTAEAREQILKIHARKMNLADDVDLRKIALITDES 364
>sp|Q8U4H3|PAN_PYRFU Proteasome-activating nucleotidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pan PE=3 SV=1
Length = 396
Score = 264 bits (675), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 129/233 (55%), Positives = 169/233 (72%), Gaps = 1/233 (0%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
T+ I+ LP DP V + NV+Y+ +GGL Q++ELRE+IELPL +PELF VG
Sbjct: 108 TMAIIEILPASKDPAVLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVG 167
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PPKGVLLYGPPG GKTL+A+AIA ++A F++VV S ++ KYIGE ARL+ E+F A+
Sbjct: 168 IDPPKGVLLYGPPGCGKTLMAKAIAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAK 227
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ P IIF+DEIDAIG +R E T +RE+ RTLM+LL ++DGFD G VK+I ATNRPD
Sbjct: 228 EKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPD 287
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
+LDPALLRPGR DR IE+PLP+ + R+EILK+H + G +D + +L E
Sbjct: 288 ILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLRG-VDLRLIAELTE 339
>sp|O57940|PAN_PYRHO Proteasome-activating nucleotidase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pan PE=3 SV=1
Length = 399
Score = 264 bits (675), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 127/233 (54%), Positives = 170/233 (72%), Gaps = 1/233 (0%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
T+ ++ LP DP V + NV+Y+ +GGL Q++ELRE+IELPL +PELF VG
Sbjct: 111 TMAVVEILPTSKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVG 170
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PPKGVLLYGPPG GKTL+A+A+A ++A F++VV S ++ KYIGE ARL+ E+F A+
Sbjct: 171 IDPPKGVLLYGPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAK 230
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ P IIF+DEIDAIG +R E T +RE+ RTLM+LL ++DGFD G VK+I ATNRPD
Sbjct: 231 EKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPD 290
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
+LDPALLRPGR DR IE+PLP+ + R+EILK+H + G +D A+ ++ E
Sbjct: 291 ILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKLKG-VDLRAIAEMTE 342
>sp|A6UQT3|PAN_METVS Proteasome-activating nucleotidase OS=Methanococcus vannielii
(strain SB / ATCC 35089 / DSM 1224) GN=pan PE=3 SV=1
Length = 407
Score = 262 bits (670), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 170/233 (72%), Gaps = 1/233 (0%)
Query: 3 TLTIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVG 62
TL ++ LP+E D M E+ ++ + +GGL++QIR+++E +ELPL NPELF +VG
Sbjct: 119 TLAVVEVLPKEKDYRAMAMELEEKPDILFGDIGGLNNQIRDIKEVVELPLKNPELFEKVG 178
Query: 63 IKPPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYAR 122
I PPKGVLLYGPPGTGKTLLA+A+A +A+F++VV S ++ K+IGE A+L+R++F A+
Sbjct: 179 IVPPKGVLLYGPPGTGKTLLAKAVARETNASFVRVVGSELVKKFIGEGAKLVRDVFKLAK 238
Query: 123 DHQPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPD 182
+ PCIIF+DEIDA+ +R T DRE+QRTLM+LL ++DGFD G VK+I ATNRPD
Sbjct: 239 EKSPCIIFIDEIDAVASKRTESLTGGDREVQRTLMQLLAEMDGFDSRGDVKIIAATNRPD 298
Query: 183 VLDPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
+LDPA+LRPGR DR IEI P+E R+EI KIH + +D + K+AE
Sbjct: 299 ILDPAILRPGRFDRIIEIAAPDEDGRLEIFKIHTDKMNIKS-VDLREIAKMAE 350
>sp|C3N7K8|PAN_SULIY Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=pan PE=3 SV=1
Length = 393
Score = 262 bits (669), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/231 (54%), Positives = 170/231 (73%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
TI+ LP++ DP+V M + NV+YS +GGL +QI+ELRE +ELPL PE+F +G++
Sbjct: 107 TILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVE 166
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PPKGVLLYGPPGTGKT+LA+A+A+ +A F+ VV+S K++GE AR++RE+F A+
Sbjct: 167 PPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRK 226
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIF+DEIDAIG +R GTS +REIQRTLM+LL +LDGF+ L VK+I ATNR D+L
Sbjct: 227 APSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDIL 286
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
DPALLRPGR DR IE+PLP+ + R EI I+ + I+ E + +L+E
Sbjct: 287 DPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSE 337
>sp|C3MY47|PAN_SULIM Proteasome-activating nucleotidase OS=Sulfolobus islandicus (strain
M.14.25 / Kamchatka #1) GN=pan PE=3 SV=1
Length = 393
Score = 262 bits (669), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 126/231 (54%), Positives = 170/231 (73%)
Query: 5 TIMRALPREVDPVVYNMLHEDPGNVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIK 64
TI+ LP++ DP+V M + NV+YS +GGL +QI+ELRE +ELPL PE+F +G++
Sbjct: 107 TILEVLPQKEDPIVKTMEIVEKPNVTYSEIGGLEEQIKELREVVELPLKKPEIFREIGVE 166
Query: 65 PPKGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFGYARDH 124
PPKGVLLYGPPGTGKT+LA+A+A+ +A F+ VV+S K++GE AR++RE+F A+
Sbjct: 167 PPKGVLLYGPPGTGKTMLAKAVATESNAVFIHVVASEFAQKFVGEGARIVRELFEMAKRK 226
Query: 125 QPCIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFDQLGKVKMIMATNRPDVL 184
P IIF+DEIDAIG +R GTS +REIQRTLM+LL +LDGF+ L VK+I ATNR D+L
Sbjct: 227 APSIIFIDEIDAIGAKRIDIGTSGEREIQRTLMQLLAELDGFNPLDNVKIIAATNRIDIL 286
Query: 185 DPALLRPGRLDRKIEIPLPNEQSRMEILKIHAAGIAKHGEIDYEAVVKLAE 235
DPALLRPGR DR IE+PLP+ + R EI I+ + I+ E + +L+E
Sbjct: 287 DPALLRPGRFDRIIEVPLPDFRGRTEIFNIYLKKMKVEDNINLELLSQLSE 337
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.140 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 90,684,078
Number of Sequences: 539616
Number of extensions: 3846840
Number of successful extensions: 22153
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2400
Number of HSP's successfully gapped in prelim test: 788
Number of HSP's that attempted gapping in prelim test: 18057
Number of HSP's gapped (non-prelim): 4120
length of query: 241
length of database: 191,569,459
effective HSP length: 114
effective length of query: 127
effective length of database: 130,053,235
effective search space: 16516760845
effective search space used: 16516760845
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)