Your job contains 1 sequence.
>026264
MAAITSVSQLHSSLSSLYPNYRSSPLILAPKTNQDTTICCLTVRSFTFSRRRLSSQSVPR
GLIIQNAATKPAKSPAEEDWKTKRELLLQKRVRSVEAKEALRLQKENNFVILDVRPEAEF
KEAHPPGAINVQIYRLIKEWTAWDIARRAAFAFFGIFSGTEENPEFLQTGVESQLDKDAK
IIVACATGGTMKPSQNLPEGQQSRSLIAAYLLVLNGYKNVYHLEGGLYKWFKEELPEVSE
E
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 026264
(241 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2137792 - symbol:AT4G27700 "AT4G27700" species... 667 1.5e-65 1
UNIPROTKB|Q3AEL0 - symbol:CHY_0566 "Rhodanese-like domain... 91 5.1e-09 2
TIGR_CMR|CHY_0566 - symbol:CHY_0566 "rhodanese-like domai... 91 5.1e-09 2
UNIPROTKB|Q74F14 - symbol:GSU0795 "Rhodanese homology dom... 77 1.9e-07 2
TIGR_CMR|GSU_0795 - symbol:GSU_0795 "rhodanese-like domai... 77 1.9e-07 2
TAIR|locus:2097628 - symbol:AT3G08920 "AT3G08920" species... 130 3.3e-07 1
UNIPROTKB|Q3Z6P8 - symbol:DET1392 "Sulfurtransferase" spe... 84 2.0e-06 2
TIGR_CMR|DET_1392 - symbol:DET_1392 "rhodanese-like domai... 84 2.0e-06 2
TIGR_CMR|CPS_3148 - symbol:CPS_3148 "putative phage shock... 79 4.3e-05 2
TAIR|locus:2156937 - symbol:STR16 "AT5G66040" species:370... 77 0.00011 2
UNIPROTKB|B2C7Y6 - symbol:NRIP1 "Chloroplast N receptor-i... 72 0.00046 2
>TAIR|locus:2137792 [details] [associations]
symbol:AT4G27700 "AT4G27700" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0007568
"aging" evidence=ISS] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009535 "chloroplast thylakoid membrane" evidence=IDA]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0000023 "maltose metabolic
process" evidence=RCA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0019252 "starch biosynthetic process"
evidence=RCA] [GO:0043085 "positive regulation of catalytic
activity" evidence=RCA] PROSITE:PS00380 PROSITE:PS00683
Pfam:PF00581 EMBL:CP002687 GO:GO:0009941 EMBL:AL161571
Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
PROSITE:PS50206 GO:GO:0009535 EMBL:AL035602 EMBL:AY050336
EMBL:AY094039 EMBL:AY085226 IPI:IPI00537687 PIR:T05875
RefSeq:NP_567785.1 UniGene:At.24242 UniGene:At.32074
UniGene:At.70640 HSSP:P31142 ProteinModelPortal:Q94A65 SMR:Q94A65
STRING:Q94A65 PRIDE:Q94A65 EnsemblPlants:AT4G27700.1 GeneID:828884
KEGG:ath:AT4G27700 TAIR:At4g27700 HOGENOM:HOG000006311
InParanoid:Q94A65 OMA:NNFVILD PhylomeDB:Q94A65
ProtClustDB:CLSN2917625 Genevestigator:Q94A65 Uniprot:Q94A65
Length = 224
Score = 667 (239.9 bits), Expect = 1.5e-65, P = 1.5e-65
Identities = 131/181 (72%), Positives = 149/181 (82%)
Query: 62 LIIQNAATKPAKSPAEEDWKTKRELLLQKRVRSVEAKEALRLQKENNFVILDVRPEAEFK 121
L IQ +TKPAK AE DW+ KRELLL+KRVRSV+ KEA RLQKENNFVILDVRPEAE+K
Sbjct: 44 LKIQCTSTKPAKPAAEVDWRQKRELLLEKRVRSVDVKEAQRLQKENNFVILDVRPEAEYK 103
Query: 122 EAHPPGAINVQIYRLIKEWTAWDXXXXXXXXXXXXXSGTEENPEFLQTGVESQLDKDAKI 181
HPPGAINV++YRLI+EWTAWD SGTEENPEF+Q+ VE++LDK+AKI
Sbjct: 104 AGHPPGAINVEMYRLIREWTAWDIARRLGFAFFGIFSGTEENPEFIQS-VEAKLDKEAKI 162
Query: 182 IVACATGGTMKPSQNLPEGQQSRSLIAAYLLVLNGYKNVYHLEGGLYKWFKEELP-EVSE 240
IVAC++ GTMKP+QNLPEGQQSRSLIAAYLLVLNGYKNV+HLEGG+Y W KE LP E E
Sbjct: 163 IVACSSAGTMKPTQNLPEGQQSRSLIAAYLLVLNGYKNVFHLEGGIYTWGKEGLPVETIE 222
Query: 241 E 241
E
Sbjct: 223 E 223
>UNIPROTKB|Q3AEL0 [details] [associations]
symbol:CHY_0566 "Rhodanese-like domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00581 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:3.40.250.10 InterPro:IPR001763
SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 eggNOG:COG0607
HOGENOM:HOG000247776 RefSeq:YP_359424.1 ProteinModelPortal:Q3AEL0
STRING:Q3AEL0 GeneID:3727246 KEGG:chy:CHY_0566 PATRIC:21274275
OMA:YCAVGSR BioCyc:CHYD246194:GJCN-567-MONOMER Uniprot:Q3AEL0
Length = 126
Score = 91 (37.1 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 171 VESQL---DKDAKIIVACATGGTMKPSQNLPEGQQSRSLIAAYLLVLNGYKNVYHLEGGL 227
VE QL DK+ +I+V C TG SRS A +LV GYK+VY+L+GG+
Sbjct: 72 VEQQLPNIDKEQEILVVCETG--------------SRSASIAQMLVSKGYKHVYNLKGGI 117
Query: 228 YKW 230
W
Sbjct: 118 ANW 120
Score = 67 (28.6 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 88 LQKRVRSVEAKEALRLQKENNFV-ILDVRPEAEFKEAHPPGAINV 131
L+ + +E EA +L EN + I+DVR E+ EA PG+ N+
Sbjct: 23 LKAGYKDLEPDEAKKLIDENPMLLIMDVREPYEYAEARIPGSHNI 67
>TIGR_CMR|CHY_0566 [details] [associations]
symbol:CHY_0566 "rhodanese-like domain protein"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00581 EMBL:CP000141
GenomeReviews:CP000141_GR Gene3D:3.40.250.10 InterPro:IPR001763
SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 eggNOG:COG0607
HOGENOM:HOG000247776 RefSeq:YP_359424.1 ProteinModelPortal:Q3AEL0
STRING:Q3AEL0 GeneID:3727246 KEGG:chy:CHY_0566 PATRIC:21274275
OMA:YCAVGSR BioCyc:CHYD246194:GJCN-567-MONOMER Uniprot:Q3AEL0
Length = 126
Score = 91 (37.1 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 171 VESQL---DKDAKIIVACATGGTMKPSQNLPEGQQSRSLIAAYLLVLNGYKNVYHLEGGL 227
VE QL DK+ +I+V C TG SRS A +LV GYK+VY+L+GG+
Sbjct: 72 VEQQLPNIDKEQEILVVCETG--------------SRSASIAQMLVSKGYKHVYNLKGGI 117
Query: 228 YKW 230
W
Sbjct: 118 ANW 120
Score = 67 (28.6 bits), Expect = 5.1e-09, Sum P(2) = 5.1e-09
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 88 LQKRVRSVEAKEALRLQKENNFV-ILDVRPEAEFKEAHPPGAINV 131
L+ + +E EA +L EN + I+DVR E+ EA PG+ N+
Sbjct: 23 LKAGYKDLEPDEAKKLIDENPMLLIMDVREPYEYAEARIPGSHNI 67
>UNIPROTKB|Q74F14 [details] [associations]
symbol:GSU0795 "Rhodanese homology domain superfamily
protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00581 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
PROSITE:PS50206 HOGENOM:HOG000247776 RefSeq:NP_951852.1
ProteinModelPortal:Q74F14 GeneID:2687422 KEGG:gsu:GSU0795
PATRIC:22024351 OMA:LYCESGA ProtClustDB:CLSK2306737
BioCyc:GSUL243231:GH27-813-MONOMER Uniprot:Q74F14
Length = 102
Score = 77 (32.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 95 VEAKEALRLQKENNF-VILDVRPEAEFKEAHPPGAINVQIYRLI 137
+ + E L+ +K NN ++DVR EFK H PGA++ ++++
Sbjct: 1 MRSNELLKRRKANNPPTVIDVRTGFEFKAGHVPGAVHAPAWKIL 44
Score = 62 (26.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 176 DKDAKIIVACATGGTMKPSQNLPEGQQSRSLIAAYLLVLNGYKNVYHLEGGLYKW 230
DK A+++V C G P Q ++ L+ Y GY+NV L+G + W
Sbjct: 53 DKSAELVVTCEHG---------PRAQMAKGLLGLY-----GYRNVELLDGHMSAW 93
>TIGR_CMR|GSU_0795 [details] [associations]
symbol:GSU_0795 "rhodanese-like domain protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] Pfam:PF00581 EMBL:AE017180 GenomeReviews:AE017180_GR
Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
PROSITE:PS50206 HOGENOM:HOG000247776 RefSeq:NP_951852.1
ProteinModelPortal:Q74F14 GeneID:2687422 KEGG:gsu:GSU0795
PATRIC:22024351 OMA:LYCESGA ProtClustDB:CLSK2306737
BioCyc:GSUL243231:GH27-813-MONOMER Uniprot:Q74F14
Length = 102
Score = 77 (32.2 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 95 VEAKEALRLQKENNF-VILDVRPEAEFKEAHPPGAINVQIYRLI 137
+ + E L+ +K NN ++DVR EFK H PGA++ ++++
Sbjct: 1 MRSNELLKRRKANNPPTVIDVRTGFEFKAGHVPGAVHAPAWKIL 44
Score = 62 (26.9 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 176 DKDAKIIVACATGGTMKPSQNLPEGQQSRSLIAAYLLVLNGYKNVYHLEGGLYKW 230
DK A+++V C G P Q ++ L+ Y GY+NV L+G + W
Sbjct: 53 DKSAELVVTCEHG---------PRAQMAKGLLGLY-----GYRNVELLDGHMSAW 93
>TAIR|locus:2097628 [details] [associations]
symbol:AT3G08920 "AT3G08920" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009534 "chloroplast thylakoid" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] PROSITE:PS00380
PROSITE:PS00683 Pfam:PF00581 GO:GO:0016021 EMBL:CP002686
GO:GO:0009941 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
SUPFAM:SSF52821 PROSITE:PS50206 EMBL:AC010871 GO:GO:0009534
EMBL:AY074549 EMBL:BT002325 EMBL:AY087039 IPI:IPI00530552
RefSeq:NP_566337.1 UniGene:At.43722 ProteinModelPortal:Q9SR92
SMR:Q9SR92 STRING:Q9SR92 PRIDE:Q9SR92 EnsemblPlants:AT3G08920.1
GeneID:820041 KEGG:ath:AT3G08920 TAIR:At3g08920
HOGENOM:HOG000239976 InParanoid:Q9SR92 OMA:WLAGGFN PhylomeDB:Q9SR92
ProtClustDB:CLSN2688183 Genevestigator:Q9SR92 Uniprot:Q9SR92
Length = 214
Score = 130 (50.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 47/164 (28%), Positives = 76/164 (46%)
Query: 84 RELLLQKRVRSVEAKEALRLQKENNFVILDVRPEAEFKEAHPPGAINVQIY--------- 134
+EL+L +VR+VE KEA + +++LDVRP E ++A G+++V ++
Sbjct: 37 KELILSGKVRAVEPKEANAVVASEGYILLDVRPAWEREKARVKGSLHVPLFVEDPDNGPI 96
Query: 135 RLIKEWTAWDXXXXXXXXXXXXXSGTEENPEFLQTGVESQLDKDAKIIVACATGGTMKPS 194
L+K+W T N EF VE+ DK++K++V C
Sbjct: 97 TLLKKWIHLGYIGLWTGQRF-----TMINDEFALRVVEAVPDKESKVLVVC--------- 142
Query: 195 QNLPEGQQSRSLIAAYLLVLNGYKNVYHLEGGLYKWFKEELPEV 238
G+ RSL A L GYK++ L GG + + + PE+
Sbjct: 143 -----GEGLRSLAAVSKLHGEGYKSLGWLTGGFNRVSEGDFPEI 181
>UNIPROTKB|Q3Z6P8 [details] [associations]
symbol:DET1392 "Sulfurtransferase" species:243164
"Dehalococcoides ethenogenes 195" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001307 PROSITE:PS00380 Pfam:PF00581 EMBL:CP000027
GenomeReviews:CP000027_GR Gene3D:3.40.250.10 InterPro:IPR001763
SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 eggNOG:COG0607
HOGENOM:HOG000247776 GO:GO:0004792 OMA:YCAVGSR RefSeq:YP_182101.1
ProteinModelPortal:Q3Z6P8 STRING:Q3Z6P8 GeneID:3229333
KEGG:det:DET1392 PATRIC:21609811 ProtClustDB:CLSK836945
BioCyc:DETH243164:GJNF-1393-MONOMER Uniprot:Q3Z6P8
Length = 144
Score = 84 (34.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 92 VRSVEAKEALRLQKEN----NFVILDVRPEAEFKEAHPPGAINVQIY 134
V+++ EA L N +F+ILDVR +E+ + H PGA+N+ Y
Sbjct: 38 VQNISVAEAKALIDRNAVSADFIILDVRTPSEYAQGHIPGAVNLDYY 84
Score = 72 (30.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 203 SRSLIAAYLLVLNGYKNVYHLEGGLYKWFKEELP 236
+RS AA L++ NG+ +Y+++GG+ W LP
Sbjct: 108 NRSASAARLMLDNGFAAIYNMQGGINAWISGGLP 141
>TIGR_CMR|DET_1392 [details] [associations]
symbol:DET_1392 "rhodanese-like domain protein"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001307 PROSITE:PS00380 Pfam:PF00581
EMBL:CP000027 GenomeReviews:CP000027_GR Gene3D:3.40.250.10
InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
eggNOG:COG0607 HOGENOM:HOG000247776 GO:GO:0004792 OMA:YCAVGSR
RefSeq:YP_182101.1 ProteinModelPortal:Q3Z6P8 STRING:Q3Z6P8
GeneID:3229333 KEGG:det:DET1392 PATRIC:21609811
ProtClustDB:CLSK836945 BioCyc:DETH243164:GJNF-1393-MONOMER
Uniprot:Q3Z6P8
Length = 144
Score = 84 (34.6 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 92 VRSVEAKEALRLQKEN----NFVILDVRPEAEFKEAHPPGAINVQIY 134
V+++ EA L N +F+ILDVR +E+ + H PGA+N+ Y
Sbjct: 38 VQNISVAEAKALIDRNAVSADFIILDVRTPSEYAQGHIPGAVNLDYY 84
Score = 72 (30.4 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 203 SRSLIAAYLLVLNGYKNVYHLEGGLYKWFKEELP 236
+RS AA L++ NG+ +Y+++GG+ W LP
Sbjct: 108 NRSASAARLMLDNGFAAIYNMQGGINAWISGGLP 141
>TIGR_CMR|CPS_3148 [details] [associations]
symbol:CPS_3148 "putative phage shock protein E"
species:167879 "Colwellia psychrerythraea 34H" [GO:0009271 "phage
shock" evidence=ISS] [GO:0016740 "transferase activity"
evidence=ISS] Pfam:PF00581 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
PROSITE:PS50206 eggNOG:COG0607 HOGENOM:HOG000247776
RefSeq:YP_269845.1 ProteinModelPortal:Q47ZC5 STRING:Q47ZC5
GeneID:3519706 KEGG:cps:CPS_3148 PATRIC:21469283 OMA:YKEGHIP
BioCyc:CPSY167879:GI48-3197-MONOMER Uniprot:Q47ZC5
Length = 133
Score = 79 (32.9 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 90 KRVRSVEAKEALRLQKENNFVILDVRPEAEFKEAHPPGAINV 131
K + E ++ ++ K+ ++LDVR E EF+E H P A+N+
Sbjct: 28 KDISQTELQQIMKNDKQ--VILLDVRTEEEFEEGHIPNAVNI 67
Score = 63 (27.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 204 RSLIAAYLLVLNGYKNVYHLEGGLYKWFKEELP 236
R+ +A +LV NG+ + HL G +W LP
Sbjct: 96 RAEVAREVLVKNGFNELDHLSGDFNEWSSNNLP 128
>TAIR|locus:2156937 [details] [associations]
symbol:STR16 "AT5G66040" species:3702 "Arabidopsis
thaliana" [GO:0007568 "aging" evidence=ISS] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0004792 "thiosulfate
sulfurtransferase activity" evidence=IDA] [GO:0006569 "tryptophan
catabolic process" evidence=RCA] [GO:0009684 "indoleacetic acid
biosynthetic process" evidence=RCA] PROSITE:PS00380 PROSITE:PS00683
Pfam:PF00581 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507
Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
PROSITE:PS50206 EMBL:AB011474 eggNOG:COG0607 HOGENOM:HOG000247776
GO:GO:0004792 BRENDA:2.8.1.1 EMBL:X89036 EMBL:AY049302
EMBL:BT000864 EMBL:AY084763 IPI:IPI00531957 PIR:S58275
RefSeq:NP_851278.1 UniGene:At.23333 PDB:1TQ1 PDBsum:1TQ1
ProteinModelPortal:Q39129 SMR:Q39129 STRING:Q39129 PaxDb:Q39129
PRIDE:Q39129 EnsemblPlants:AT5G66040.1 GeneID:836734
KEGG:ath:AT5G66040 GeneFarm:4731 TAIR:At5g66040 InParanoid:Q39129
OMA:CGAINVP PhylomeDB:Q39129 SABIO-RK:Q39129
EvolutionaryTrace:Q39129 Genevestigator:Q39129 Uniprot:Q39129
Length = 120
Score = 77 (32.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 26/79 (32%), Positives = 35/79 (44%)
Query: 158 SGTEENPEFLQTGVESQLDKDAKIIVACATGGTMKPSQNLPEGQQSRSLIAAYLLVLNGY 217
SG +NP+FL+ V S + IIV C +GG RS+ A L+ G+
Sbjct: 54 SGMSKNPDFLEQ-VSSHFGQSDNIIVGCQSGG--------------RSIKATTDLLHAGF 98
Query: 218 KNVYHLEGGLYKWFKEELP 236
V + GG W K LP
Sbjct: 99 TGVKDIVGGYSAWAKNGLP 117
Score = 57 (25.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 112 LDVRPEAEFKEAHPPGAINV 131
LDVR EF + H GAINV
Sbjct: 27 LDVRTPEEFSQGHACGAINV 46
>UNIPROTKB|B2C7Y6 [details] [associations]
symbol:NRIP1 "Chloroplast N receptor-interacting protein 1"
species:4100 "Nicotiana benthamiana" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00581 Gene3D:3.40.250.10 InterPro:IPR001763
SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 EMBL:EU332890
EMBL:EU332891 SMR:B2C7Y6 IntAct:B2C7Y6 Uniprot:B2C7Y6
Length = 185
Score = 72 (30.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 94 SVEAKEALRLQKENNFVILDVRPEAEFKEAHPPGAINVQ-IYRL 136
SV + AL L + + LDVR EF + H PGAIN+ ++R+
Sbjct: 75 SVPVRVALELLQAGHRY-LDVRTAEEFSDGHAPGAINIPYMFRI 117
Score = 71 (30.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 25/79 (31%), Positives = 34/79 (43%)
Query: 158 SGTEENPEFLQTGVESQLDKDAKIIVACATGGTMKPSQNLPEGQQSRSLIAAYLLVLNGY 217
SG +NP F + +E KD +IIV C G RS +AA L+ G+
Sbjct: 119 SGMIKNPNFAEQVLE-HFGKDDEIIVGCQLG--------------KRSFMAATDLLAAGF 163
Query: 218 KNVYHLEGGLYKWFKEELP 236
V + GG W + LP
Sbjct: 164 SGVTDIAGGYAAWTENGLP 182
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.131 0.382 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 241 201 0.00089 111 3 11 23 0.40 33
31 0.45 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 11
No. of states in DFA: 615 (65 KB)
Total size of DFA: 174 KB (2101 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.79u 0.27s 16.06t Elapsed: 00:00:01
Total cpu time: 15.79u 0.27s 16.06t Elapsed: 00:00:01
Start: Fri May 10 05:21:51 2013 End: Fri May 10 05:21:52 2013