BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026266
(241 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SHC8|VAP12_ARATH Vesicle-associated protein 1-2 OS=Arabidopsis thaliana GN=PVA12
PE=1 SV=1
Length = 239
Score = 322 bits (824), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 161/240 (67%), Positives = 207/240 (86%), Gaps = 3/240 (1%)
Query: 3 TGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPR 62
+ ELL+I+P++L+FPFELKKQISCSL L NKTDNYVAFKVKTTNPKKYCVRPNTG+V PR
Sbjct: 2 SNELLTIDPVDLQFPFELKKQISCSLYLGNKTDNYVAFKVKTTNPKKYCVRPNTGVVHPR 61
Query: 63 STCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLR 122
S+ +++VTMQAQKEAP D+QCKDKFLLQ V + G T KD+ EMF+KEAGH VEE KLR
Sbjct: 62 SSSEVLVTMQAQKEAPADLQCKDKFLLQCVVASPGATPKDVTHEMFSKEAGHRVEETKLR 121
Query: 123 VIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDKSTEARA 182
V+YV+PP+PPSPV EGSEEGSSPR SVSDNG N+++F AA R +R++ QD S+EARA
Sbjct: 122 VVYVAPPRPPSPVREGSEEGSSPRASVSDNG--NASDFTAAPRFSADRVDAQDNSSEARA 179
Query: 183 LISKLKDEKNNAVQQNNKLRQDLELLRREGKKNR-GGVSFIFVILVGLVGIVLGYVMKKS 241
L++KL +EKN+AVQ NN+L+Q+L+ LRRE K+++ GG+ F++V+LVGL+G++LGY+MK++
Sbjct: 180 LVTKLTEEKNSAVQLNNRLQQELDQLRRESKRSKSGGIPFMYVLLVGLIGLILGYIMKRT 239
>sp|Q8VZ95|VAP11_ARATH Vesicle-associated protein 1-1 OS=Arabidopsis thaliana GN=PVA11
PE=1 SV=1
Length = 256
Score = 318 bits (815), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/242 (66%), Positives = 204/242 (84%), Gaps = 3/242 (1%)
Query: 1 MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVL 60
MS ELL++EPL+L+FPFELKKQISCSL L+NKTDN VAFKVKTTNPKKYCVRPNTG+VL
Sbjct: 17 MSNSELLTVEPLDLQFPFELKKQISCSLYLTNKTDNNVAFKVKTTNPKKYCVRPNTGVVL 76
Query: 61 PRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECK 120
PRSTC+++VTMQAQKEAP DMQCKDKFLLQ V + G TAK++ EMF+KEAGH VEE K
Sbjct: 77 PRSTCEVLVTMQAQKEAPSDMQCKDKFLLQGVIASPGVTAKEVTPEMFSKEAGHRVEETK 136
Query: 121 LRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDKSTEA 180
LRV YV+PP+PPSPV EGSEEGSSPR SVSDNGH +EF+ + HQ+ ++EA
Sbjct: 137 LRVTYVAPPRPPSPVHEGSEEGSSPRASVSDNGH--GSEFSFERFIVDNKAGHQENTSEA 194
Query: 181 RALISKLKDEKNNAVQQNNKLRQDLELLRREGKKNR-GGVSFIFVILVGLVGIVLGYVMK 239
RALI+KL +EK +A+Q NN+L+++L+ LRRE KK++ GG+ F++V+LVGL+G++LGY+MK
Sbjct: 195 RALITKLTEEKQSAIQLNNRLQRELDQLRRESKKSQSGGIPFMYVLLVGLIGLILGYIMK 254
Query: 240 KS 241
++
Sbjct: 255 RT 256
>sp|Q84WW5|VAP13_ARATH Vesicle-associated protein 1-3 OS=Arabidopsis thaliana GN=PVA13
PE=2 SV=1
Length = 239
Score = 278 bits (711), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 146/242 (60%), Positives = 191/242 (78%), Gaps = 6/242 (2%)
Query: 1 MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDNY-VAFKVKTTNPKKYCVRPNTGIV 59
M+TG+L++I P ELKFPFELKKQ SCS+QL+NKT VAFKVKTTNP+KYCVRPNTG+V
Sbjct: 1 MTTGDLVNIHPTELKFPFELKKQSSCSMQLTNKTTTQCVAFKVKTTNPRKYCVRPNTGVV 60
Query: 60 LPRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEEC 119
LP +C++ VTMQAQKEAP DMQCKDKFL+Q+V +DGTT+K++ AEMFNKEAG V+E+
Sbjct: 61 LPGDSCNVTVTMQAQKEAPLDMQCKDKFLVQTVVVSDGTTSKEVLAEMFNKEAGRVIEDF 120
Query: 120 KLRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDKSTE 179
KLRV+Y+ P PPSPVPEGSEEG+SP S++D +++ F +R F E E KS+E
Sbjct: 121 KLRVVYI-PANPPSPVPEGSEEGNSPMASLNDIASQSASLFDDVSRTFEETSE---KSSE 176
Query: 180 ARALISKLKDEKNNAVQQNNKLRQDLELLRRE-GKKNRGGVSFIFVILVGLVGIVLGYVM 238
A ++ISKL +EK +A QQ+ KLR +LE+LR+E KK GG S + ++LVGL+G V+GY++
Sbjct: 177 AWSMISKLTEEKTSATQQSQKLRLELEMLRKETSKKQSGGHSLLLMLLVGLLGCVIGYLL 236
Query: 239 KK 240
+
Sbjct: 237 NR 238
>sp|Q9SYC9|VAP14_ARATH Vesicle-associated protein 1-4 OS=Arabidopsis thaliana GN=PVA14
PE=2 SV=1
Length = 571
Score = 221 bits (564), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 101/156 (64%), Positives = 127/156 (81%)
Query: 3 TGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPR 62
+ ELL I+P++++FP EL K++SCSL L+NKT+NYVAFK KTTN KKY VRPN G+VLPR
Sbjct: 173 SDELLIIDPVDVQFPIELNKKVSCSLNLTNKTENYVAFKAKTTNAKKYYVRPNVGVVLPR 232
Query: 63 STCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLR 122
S+C+++V MQA KEAP DMQC+DK L Q TTAKD+ +EMF+KEAGH EE +L+
Sbjct: 233 SSCEVLVIMQALKEAPADMQCRDKLLFQCKVVEPETTAKDVTSEMFSKEAGHPAEETRLK 292
Query: 123 VIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSA 158
V+YV+PPQPPSPV EG+EEGSSPR SVSDNG+ + A
Sbjct: 293 VMYVTPPQPPSPVQEGTEEGSSPRASVSDNGNASEA 328
Score = 205 bits (521), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 125/176 (71%), Gaps = 1/176 (0%)
Query: 1 MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVL 60
MST ELL+ + ++++FP EL KQ SCSL L+NKTDNYVAFK +TT PK YCV+P+ G+VL
Sbjct: 1 MSTDELLTFDHVDIRFPIELNKQGSCSLNLTNKTDNYVAFKAQTTKPKMYCVKPSVGVVL 60
Query: 61 PRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECK 120
PRS+C+++V MQA KEAP D QCKDK L Q GT K++ +EMF+KEAGH VEE
Sbjct: 61 PRSSCEVLVVMQALKEAPADRQCKDKLLFQCKVVEPGTMDKEVTSEMFSKEAGHRVEETI 120
Query: 121 LRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDK 176
++IYV+PPQP SPV EG E+GSSP SVSD G+ S F + + I D+
Sbjct: 121 FKIIYVAPPQPQSPVQEGLEDGSSPSASVSDKGNA-SEVFVGPSVGIVDLIRMSDE 175
>sp|Q9LVU1|VAP21_ARATH Vesicle-associated protein 2-1 OS=Arabidopsis thaliana GN=PVA21
PE=2 SV=1
Length = 220
Score = 192 bits (487), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/237 (42%), Positives = 151/237 (63%), Gaps = 33/237 (13%)
Query: 5 ELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRST 64
+L+SI+P ELKF FEL+KQ C L+++NKT+NYVAFKVKTT+PKKY VRPNTG++ P +
Sbjct: 8 QLISIQPDELKFLFELEKQSYCDLKVANKTENYVAFKVKTTSPKKYFVRPNTGVIQPWDS 67
Query: 65 CDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLRVI 124
C I VT+QAQ+E PPDMQCKDKFLLQS T ++ + F K++G + ECKL+V
Sbjct: 68 CIIRVTLQAQREYPPDMQCKDKFLLQSTIVPPHTDVDELPQDTFTKDSGKTLTECKLKVS 127
Query: 125 YVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDKSTEARALI 184
Y++P + + SS G+ + +G +S+E + I
Sbjct: 128 YITP---------STTQRSSESGATNGDG----------------------QSSETISTI 156
Query: 185 SKLKDEKNNAVQQNNKLRQDLELL-RREGKKNRG-GVSFIFVILVGLVGIVLGYVMK 239
+LK+E++ AV+Q +L+ +LE + RR ++N G G+S +VGL+G+++G+++K
Sbjct: 157 QRLKEERDAAVKQTQQLQHELETVRRRRNQRNSGNGLSLKLAAMVGLIGLIIGFILK 213
>sp|O82213|VAP31_ARATH Vesicle-associated protein 3-1 OS=Arabidopsis thaliana GN=PVA31
PE=3 SV=1
Length = 149
Score = 184 bits (466), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 86/126 (68%), Positives = 103/126 (81%)
Query: 1 MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVL 60
MS ELL IEP+ L+FPFELKKQ+SCSL L+NKTDN VAFKVKTTN YCVRPN G++L
Sbjct: 1 MSNNELLEIEPMYLQFPFELKKQMSCSLYLTNKTDNNVAFKVKTTNRNNYCVRPNYGLIL 60
Query: 61 PRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECK 120
P+STC ++VTMQAQKE P DMQ +KF++QSV + G TAK++ EMF+KE+GHVVEE K
Sbjct: 61 PKSTCKVLVTMQAQKEVPSDMQSFEKFMIQSVLASPGVTAKEVTREMFSKESGHVVEETK 120
Query: 121 LRVIYV 126
LRV YV
Sbjct: 121 LRVTYV 126
>sp|B9DHD7|VAP22_ARATH Vesicle-associated protein 2-2 OS=Arabidopsis thaliana GN=PVA22
PE=1 SV=1
Length = 386
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/148 (55%), Positives = 102/148 (68%), Gaps = 4/148 (2%)
Query: 6 LLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTC 65
LL I+P L+F +LKKQ SC +QL+N T +YVAFKVKTT+PKKYCVRPN G+V P+STC
Sbjct: 5 LLDIQPRTLQFAVDLKKQTSCVVQLTNTTHHYVAFKVKTTSPKKYCVRPNVGVVAPKSTC 64
Query: 66 DIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLRVIY 125
+ V MQA KE PPDM CKDKFL+QS + TT +DI A MF+K G +EE KLRV
Sbjct: 65 EFTVIMQAFKEPPPDMVCKDKFLIQSTAVSAETTDEDITASMFSKAEGKHIEENKLRVTL 124
Query: 126 VSPPQPPSPVPEGSEEGSSPRGSVSDNG 153
V PPS PE S + +G+V ++
Sbjct: 125 V----PPSDSPELSPINTPKQGAVFEDS 148
>sp|O60119|YH75_SCHPO Vesicle-associated membrane protein-associated protein C16G5.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC16G5.05c PE=1 SV=1
Length = 383
Score = 88.2 bits (217), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/197 (34%), Positives = 95/197 (48%), Gaps = 19/197 (9%)
Query: 3 TGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPR 62
+GEL P + K++ + + N V FKVKTT PK YCVRPN+G + P+
Sbjct: 6 SGELFFYPPFTT-----MSKEL---ISVHNPNPEPVIFKVKTTAPKHYCVRPNSGKIEPK 57
Query: 63 STCDIIVTMQAQKEAP-PDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEA---GHVVEE 118
ST ++ V +QA KE P PD +C+DKFL+QS+ D T+ N F E G + +
Sbjct: 58 STVNVQVLLQAMKEEPAPDFKCRDKFLIQSMAIGDADTSNVENYHEFWTEMEKQGRSIFD 117
Query: 119 CKLRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDKST 178
K+R +Y S QPP + E S+ VS G N A A ++
Sbjct: 118 RKIRCVY-STKQPPQSADKQVENTSTSNPPVSVEGSENLASSVGGPTAVGVSLD------ 170
Query: 179 EARALISKLKDEKNNAV 195
EA+ + KD +N V
Sbjct: 171 EAQNDFNGAKDHLSNGV 187
>sp|Q10484|YDFC_SCHPO Uncharacterized protein C17C9.12 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC17C9.12 PE=1 SV=2
Length = 319
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Query: 16 FPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQAQK 75
FP L + + C L+L N + FKVKTT PK+YCVRPN G + S + V +Q
Sbjct: 11 FPRPLTRLVKCDLELRNTAPYPIGFKVKTTAPKQYCVRPNGGRIEANSAVSVEVILQPLD 70
Query: 76 EAP-PDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLRVIY 125
P P +C+DKFL+QS + DI A+++ + + + E K+R +Y
Sbjct: 71 HEPAPGTKCRDKFLVQSTELKPELQGMDI-ADIWTQVSKANISERKIRCVY 120
>sp|Q16943|VP33_APLCA Vesicle-associated membrane protein/synaptobrevin-binding protein
OS=Aplysia californica PE=2 SV=1
Length = 260
Score = 75.5 bits (184), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 109/223 (48%), Gaps = 20/223 (8%)
Query: 2 STGELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVL 60
S + L +EP EL+F ++ L+LSN TD + FKVKTT PK+YCVRPN+GI+
Sbjct: 3 SHEQALILEPAGELRFKGPFTDVVTADLKLSNPTDRRICFKVKTTAPKRYCVRPNSGILE 62
Query: 61 PRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEA-GHVVEEC 119
P+++ + V +Q P+ + K KF++QS+ D + E+ K+A + +
Sbjct: 63 PKTSIAVAVMLQPFNYD-PNEKNKHKFMVQSMYAPDHVVE---SQELLWKDAPPESLMDT 118
Query: 120 KLRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFA------AAARAFTERIEH 173
KLR ++ +P+GS + + S + + + +E A A+ + T+ +
Sbjct: 119 KLRCVFE--------MPDGSHQAPASDASRATDAGAHFSESALEDPTVASRKTETQSPKR 170
Query: 174 QDKSTEARALISKLKDEKNNAVQQNNKLRQDLELLRREGKKNR 216
A + KL+ E A + L+ + L+ EG + R
Sbjct: 171 VGAVGSAGEDVKKLQHELKKAQSEITSLKGENSQLKDEGIRLR 213
>sp|Q9QY76|VAPB_MOUSE Vesicle-associated membrane protein-associated protein B OS=Mus
musculus GN=Vapb PE=2 SV=3
Length = 243
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 119/246 (48%), Gaps = 23/246 (9%)
Query: 5 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRS 63
++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+G++ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTVPRRYCVRPNSGVIDAGA 65
Query: 64 TCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLR 122
+ ++ V +Q + P+ + K KF++QS+ T+ + E KEA + + KLR
Sbjct: 66 SLNVSVMLQPF-DYDPNEKSKHKFMVQSMFAPPDTS----DMEAVWKEAKPEDLMDSKLR 120
Query: 123 VIYVSPPQPPSP--------VPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQ 174
++ P + P +P + + +P + S ++ E + E Q
Sbjct: 121 CVFELPAENAKPHDVEINKIIPTSASKTEAPAAAKSLTSPLDDTE---VKKVMEECRRLQ 177
Query: 175 DKSTEARALISKLKDEKNNAVQQNNKLRQDLELLRREGKKNRGGVS---FIFVILVGLVG 231
+ R +LK+E V++ + L GK+ G+S V+L +VG
Sbjct: 178 GEVQRLREESRQLKEEDGLRVRKAMPSNSPVAALAATGKEE--GLSARLLALVVLFFIVG 235
Query: 232 IVLGYV 237
+++G +
Sbjct: 236 VIIGKI 241
>sp|Q5R601|VAPA_PONAB Vesicle-associated membrane protein-associated protein A OS=Pongo
abelii GN=VAPA PE=2 SV=2
Length = 249
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 55/256 (21%)
Query: 11 PLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVT 70
P +LKF ++ +L+L N +D V FKVKTT P++YCVRPN+GI+ P ST + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 71 MQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLRVIYVSP- 128
+Q + P+ + K KF++Q++ T+ + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNTS----DMEAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 129 ---------PQPPSPVPEGSEEGSSPR-GSVSDNGHVNSAEFAAAARAFTERIEHQDKST 178
P P+ ++G P+ SVS N T
Sbjct: 135 ENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLN------------------------DT 170
Query: 179 EARALIS---KLKDEKNNAVQQNNKLRQDLELLRREGKKNRGG-----------VSFIFV 224
E R L+ +L+ E ++N LR + LR+ ++ G S +
Sbjct: 171 ETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPS 230
Query: 225 ILVGLVGIVLGYVMKK 240
+LV + I +G+ + K
Sbjct: 231 LLVVIAAIFIGFFLGK 246
>sp|Q9P0L0|VAPA_HUMAN Vesicle-associated membrane protein-associated protein A OS=Homo
sapiens GN=VAPA PE=1 SV=3
Length = 249
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 55/256 (21%)
Query: 11 PLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVT 70
P +LKF ++ +L+L N +D V FKVKTT P++YCVRPN+GI+ P ST + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSTVTVSVM 79
Query: 71 MQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLRVIYVSP- 128
+Q + P+ + K KF++Q++ T+ + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNTS----DMEAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 129 ---------PQPPSPVPEGSEEGSSPR-GSVSDNGHVNSAEFAAAARAFTERIEHQDKST 178
P P+ ++G P+ SVS N T
Sbjct: 135 ENDKLNDMEPSKAVPLNASKQDGPMPKPHSVSLN------------------------DT 170
Query: 179 EARALIS---KLKDEKNNAVQQNNKLRQDLELLRREGKKNRGG-----------VSFIFV 224
E R L+ +L+ E ++N LR + LR+ ++ G S +
Sbjct: 171 ETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSTASFRDNVTSPLPS 230
Query: 225 ILVGLVGIVLGYVMKK 240
+LV + I +G+ + K
Sbjct: 231 LLVVIAAIFIGFFLGK 246
>sp|Q9Z269|VAPB_RAT Vesicle-associated membrane protein-associated protein B OS=Rattus
norvegicus GN=Vapb PE=1 SV=3
Length = 243
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 118/246 (47%), Gaps = 23/246 (9%)
Query: 5 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRS 63
++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+G++ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGVIDAGA 65
Query: 64 TCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLR 122
+ ++ V +Q + P+ + K KF++QS+ T+ + E KEA + + KLR
Sbjct: 66 SLNVSVMLQPF-DYDPNEKSKHKFMVQSMFAPPDTS----DMEAVWKEAKPEDLMDSKLR 120
Query: 123 VIYVSPPQPPSP--------VPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQ 174
++ P + P +P + + +P + ++ AE + E Q
Sbjct: 121 CVFELPAENAKPHDVEINKIMPTSASKTEAPVAAKPLTSPLDDAE---VKKVMEECRRLQ 177
Query: 175 DKSTEARALISKLKDEKNNAVQQNNKLRQDLELLRREGKKNRGGVS---FIFVILVGLVG 231
+ R +LK+E ++ + L GK+ G+S V+L +VG
Sbjct: 178 GEVQRLREESRQLKEEDGLRARKALPSNSPMAALAASGKEE--GLSARLLALVVLFFIVG 235
Query: 232 IVLGYV 237
+++G +
Sbjct: 236 VIIGKI 241
>sp|A5GFS8|VAPB_PIG Vesicle-associated membrane protein-associated protein B OS=Sus
scrofa GN=VAPB PE=3 SV=1
Length = 243
Score = 71.2 bits (173), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 123/247 (49%), Gaps = 25/247 (10%)
Query: 5 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRS 63
++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+GI+ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 64 TCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLR 122
+ ++ V +Q + P+ + K KF++QS+ T+ + E KEA + + KLR
Sbjct: 66 SINVSVMLQPF-DYDPNEKSKHKFMVQSMFAPADTS----DMEAAWKEAKPEDLMDSKLR 120
Query: 123 VIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQDKSTEARA 182
++ P + P + S S ++ V+ A +A +++ + K ++
Sbjct: 121 CVFELPAENDKPHDVEINKIISTTASKTETPVVSKALSSALDDTEVKKVMEECKRLQSE- 179
Query: 183 LISKLKDEKNNAVQQNNKLRQDLELL------------RREGKKNRGGVSFIFVILVGLV 230
+ +L++E N +++ + LR +L + EG R V+L +V
Sbjct: 180 -VQRLREE-NKQLKEEDGLRMRKPVLSNSPAPAPATPGKEEGLSTR---LLALVVLFFIV 234
Query: 231 GIVLGYV 237
G+++G +
Sbjct: 235 GVIIGKI 241
>sp|A2VDZ9|VAPB_BOVIN Vesicle-associated membrane protein-associated protein B OS=Bos
taurus GN=VAPB PE=2 SV=1
Length = 243
Score = 70.9 bits (172), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 126/257 (49%), Gaps = 45/257 (17%)
Query: 5 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRS 63
++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+GI+ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 64 TCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLR 122
+ ++ V +Q + P+ + K KF++QS+ T+ + E KEA + + KLR
Sbjct: 66 SINVSVMLQPF-DYDPNEKSKHKFMVQSMFAPTDTS----DMEAVWKEAKPEDLMDSKLR 120
Query: 123 VIYVSPPQPPSP--------VPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERIEHQ 174
++ P + P +P + + +P S + + ++ E +++ +
Sbjct: 121 CVFELPAENDKPHDVEINKIIPTTASKTETPTVSKALSSSLDDTE--------VKKVMEE 172
Query: 175 DKSTEARALISKLKDEKNNAVQQNNKLRQDLELLRREGKKN-----------RGGVS--- 220
K ++ + +L++E N ++ + LR +R+ + N G+S
Sbjct: 173 CKRLQSE--VQRLREE-NKQFKEEDGLR-----MRKTAQSNSPAPASAMAGKEEGLSTRL 224
Query: 221 FIFVILVGLVGIVLGYV 237
V+L +VG+++G +
Sbjct: 225 LALVVLFFIVGVIIGKI 241
>sp|O95292|VAPB_HUMAN Vesicle-associated membrane protein-associated protein B/C OS=Homo
sapiens GN=VAPB PE=1 SV=3
Length = 243
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 76/132 (57%), Gaps = 7/132 (5%)
Query: 5 ELLSIEPL-ELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRS 63
++LS+EP ELKF ++ +L+L N TD V FKVKTT P++YCVRPN+GI+ +
Sbjct: 6 QVLSLEPQHELKFRGPFTDVVTTNLKLGNPTDRNVCFKVKTTAPRRYCVRPNSGIIDAGA 65
Query: 64 TCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLR 122
+ ++ V +Q + P+ + K KF++QS+ T+ + E KEA + + KLR
Sbjct: 66 SINVSVMLQPF-DYDPNEKSKHKFMVQSMFAPTDTS----DMEAVWKEAKPEDLMDSKLR 120
Query: 123 VIYVSPPQPPSP 134
++ P + P
Sbjct: 121 CVFELPAENDKP 132
>sp|Q9WV55|VAPA_MOUSE Vesicle-associated membrane protein-associated protein A OS=Mus
musculus GN=Vapa PE=1 SV=2
Length = 249
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 113/256 (44%), Gaps = 55/256 (21%)
Query: 11 PLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVT 70
P +LKF ++ +L+L N +D V FKVKTT P++YCVRPN+GI+ P S + V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGSIVTVSVM 79
Query: 71 MQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLRVIYVSP- 128
+Q + P+ + K KF++Q++ + + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNIS----DMEAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 129 ---------PQPPSPVPEGSEEGSSPR-GSVSDNGHVNSAEFAAAARAFTERIEHQDKST 178
P P+ ++G P+ SVS N T
Sbjct: 135 ENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLN------------------------DT 170
Query: 179 EARALIS---KLKDEKNNAVQQNNKLRQDLELLRREGKKNRGG----VSF-------IFV 224
E R L+ +L+ E ++N LR + LR+ ++ G VSF +
Sbjct: 171 ETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSAVSFRDNVTSPLPS 230
Query: 225 ILVGLVGIVLGYVMKK 240
+LV + I +G+ + K
Sbjct: 231 LLVVIAAIFIGFFLGK 246
>sp|Q9Z270|VAPA_RAT Vesicle-associated membrane protein-associated protein A OS=Rattus
norvegicus GN=Vapa PE=1 SV=3
Length = 249
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 113/256 (44%), Gaps = 55/256 (21%)
Query: 11 PLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVT 70
P +LKF ++ +L+L N +D V FKVKTT P++YCVRPN+G++ P S + V
Sbjct: 20 PSDLKFKGPFTDVVTTNLKLQNPSDRKVCFKVKTTAPRRYCVRPNSGVIDPGSIVTVSVM 79
Query: 71 MQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLRVIYVSP- 128
+Q + P+ + K KF++Q++ + + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNIS----DMEAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 129 ---------PQPPSPVPEGSEEGSSPR-GSVSDNGHVNSAEFAAAARAFTERIEHQDKST 178
P P+ ++G P+ SVS N T
Sbjct: 135 ENDKLNDMEPSKAVPLNASKQDGPLPKPHSVSLN------------------------DT 170
Query: 179 EARALIS---KLKDEKNNAVQQNNKLRQDLELLRREGKKNRGG----VSF-------IFV 224
E R L+ +L+ E ++N LR + LR+ ++ G VSF +
Sbjct: 171 ETRKLMEECKRLQGEMMKLSEENRHLRDEGLRLRKVAHSDKPGSTSAVSFRDNVTSPLPS 230
Query: 225 ILVGLVGIVLGYVMKK 240
+LV + I +G+ + K
Sbjct: 231 LLVVIAAIFIGFFLGK 246
>sp|Q0VCY1|VAPA_BOVIN Vesicle-associated membrane protein-associated protein A OS=Bos
taurus GN=VAPA PE=2 SV=1
Length = 249
Score = 67.4 bits (163), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 112/258 (43%), Gaps = 59/258 (22%)
Query: 11 PLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVT 70
P +LKF ++ +L+L N +D V FKVKTT P++YCVRPN+GI+ P T + V
Sbjct: 20 PTDLKFKGPFTDVVTTNLKLRNPSDRKVCFKVKTTAPRRYCVRPNSGIIDPGLTVTVSVM 79
Query: 71 MQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEECKLRVIYVSP- 128
+Q + P+ + K KF++Q++ + + E KEA + + KLR ++ P
Sbjct: 80 LQPF-DYDPNEKSKHKFMVQTIFAPPNIS----DMEAVWKEAKPDELMDSKLRCVFEMPN 134
Query: 129 ---------PQPPSPVPEGSEEGSSPRG---SVSDNGHVNSAEFAAAARAFTERIEHQDK 176
P P+ ++G P+ S+SD
Sbjct: 135 ENDKLNDMEPSKAVPLNAAKQDGPVPKPHSVSLSD------------------------- 169
Query: 177 STEARALIS---KLKDEKNNAVQQNNKLRQDLELLRREGKKNRGG----VSF-------I 222
TE R L+ +L+ E ++N LR + LR+ + G VSF +
Sbjct: 170 -TETRKLVEECKRLQGEMMKLSEENRLLRDEGLRLRKVAHSEKPGSTSAVSFRENVTSPL 228
Query: 223 FVILVGLVGIVLGYVMKK 240
+LV + I +G+ + K
Sbjct: 229 PSLLVVIAAIFIGFFLGK 246
>sp|P40075|SCS2_YEAST Vesicle-associated membrane protein-associated protein SCS2
OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SCS2 PE=1 SV=3
Length = 244
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 7 LSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCD 66
+ I P L + L +Q + +SN +D +AFKVKTT PK YCVRPN +V P T
Sbjct: 4 VEISPDVLVYKSPLTEQSTEYASISNNSDQTIAFKVKTTAPKFYCVRPNAAVVAPGETIQ 63
Query: 67 IIVTMQAQKEAP-PDMQCKDKFLL 89
+ V E P D +C+DKFL+
Sbjct: 64 VQVIFLGLTEEPAADFKCRDKFLV 87
>sp|Q8VYN2|VAP42_ARATH Vesicle-associated protein 4-2 OS=Arabidopsis thaliana GN=PVA42
PE=1 SV=1
Length = 295
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 12/135 (8%)
Query: 1 MSTGELLSIEPLE-LKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIV 59
+ T L ++P E L FP+E KQ+ ++++ N + ++VAFK +TT PK +RP I+
Sbjct: 102 LPTKRRLKLDPSEKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTAPKSCFMRPPGAIL 161
Query: 60 LPRSTCDIIVTM------QAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAG 113
P T II T+ E P D + + KF + S+K D E+F+++
Sbjct: 162 APGET--IIATVFKFVEPPENNEKPMDQRSRVKFKIMSLKVKG---PMDYVPELFDEQKD 216
Query: 114 HVVEECKLRVIYVSP 128
V +E LRVI++ P
Sbjct: 217 DVSKEQILRVIFLDP 231
>sp|Q8LPQ7|VAP43_ARATH Vesicle-associated protein 4-3 OS=Arabidopsis thaliana GN=PVA43
PE=2 SV=1
Length = 287
Score = 63.9 bits (154), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 8/138 (5%)
Query: 1 MSTGELLSIEP-LELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIV 59
+ T L ++P +L FP+E KQ+ ++++ N + ++VAFK +TT PK +RP I+
Sbjct: 94 LPTKRRLKLDPSAKLYFPYEPGKQVRSAIKIKNTSKSHVAFKFQTTVPKSCFMRPAGAIL 153
Query: 60 LPR----STCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHV 115
P +T V E P + + KF + S+K T D E+F ++ HV
Sbjct: 154 APGEEIIATVFKFVEPPENNEKPMEQKSGVKFKIMSLKMKVPT---DYMPELFEEQKDHV 210
Query: 116 VEECKLRVIYVSPPQPPS 133
EE +RV+++ P P S
Sbjct: 211 SEEQVMRVVFLDPENPNS 228
>sp|Q1ECE0|VAP41_ARATH Vesicle-associated protein 4-1 OS=Arabidopsis thaliana GN=PVA41
PE=2 SV=1
Length = 266
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 8/123 (6%)
Query: 14 LKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLP-----RSTCDII 68
L FP+E KQ+ +++L N + ++ AFK +TT PK +RP G++ P + +
Sbjct: 85 LYFPYEPGKQVRSAIKLKNTSKSHTAFKFQTTAPKSCYMRPPGGVLAPGESVFATVFKFV 144
Query: 69 VTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEECKLRVIYVSP 128
+ ++ P + + K KF + S+K G + E+F+++ V E LRVI++
Sbjct: 145 EHPENNEKQPLNQKSKVKFKIMSLKVKPGV---EYVPELFDEQKDQVAVEQVLRVIFIDA 201
Query: 129 PQP 131
+P
Sbjct: 202 DRP 204
>sp|Q6Q595|SCS22_YEAST Vesicle-associated membrane protein-associated protein SCS22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=SCS22 PE=1 SV=2
Length = 175
Score = 52.0 bits (123), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 7 LSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCD 66
+ I P +L F L KQ + ++L N + V FKV+T+ P KYCVRPN I+ + +
Sbjct: 1 MRIVPEKLVFKAPLNKQSTEYIKLENDGEKRVIFKVRTSAPTKYCVRPNVAIIGAHESVN 60
Query: 67 I-IVTMQAQKEAPPDM--QCKDKFLLQSVKTNDGTTAKDINAEMFNKEAGHVVEEC---- 119
+ IV + K D Q +DKFL+ ++ I A N E G ++ +
Sbjct: 61 VQIVFLGLPKSTADDEMDQKRDKFLIVTLP---------IPAAYQNVEDGELLSDWPNLE 111
Query: 120 ----------KLRVIY-VSPPQPPSPVPEGSEEGSSPRGSVSDNGH 154
K+++ + V P + PS G+ + S R + NG
Sbjct: 112 EQYKDDIVFKKIKIFHSVLPKRKPS----GNHDAESARAPSAGNGQ 153
>sp|Q9CWP6|MSPD2_MOUSE Motile sperm domain-containing protein 2 OS=Mus musculus GN=Mospd2
PE=1 SV=2
Length = 518
Score = 47.8 bits (112), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 6/132 (4%)
Query: 4 GELLSIEPLE-LKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPR 62
G LL I P E L F + + L+N T N VAFKV+TT P+KY V+P+ P
Sbjct: 325 GPLLHISPAEELYFGSIESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPG 384
Query: 63 STCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEA-GHVVEECKL 121
++ DIIV+ + +D+FL+ + + + F KE + V E +L
Sbjct: 385 ASIDIIVSPHGGLT----VSAQDRFLIMAAEMEQSSGTGPAELSQFWKEVPRNKVMEHRL 440
Query: 122 RVIYVSPPQPPS 133
R V +P S
Sbjct: 441 RCHTVESSKPNS 452
>sp|Q8NHP6|MSPD2_HUMAN Motile sperm domain-containing protein 2 OS=Homo sapiens GN=MOSPD2
PE=1 SV=1
Length = 518
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 4 GELLSIEPLE-LKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPR 62
G LL I P E L F + + L+N T N VAFKV+TT P+KY V+P+ P
Sbjct: 325 GPLLHISPAEELYFGSTESGEKKTLIVLTNVTKNIVAFKVRTTAPEKYRVKPSNSSCDPG 384
Query: 63 STCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINAEMFNKEA-GHVVEECKL 121
++ DI+V+ + +D+FL+ + + + F KE + V E +L
Sbjct: 385 ASVDIVVSPHGGLT----VSAQDRFLIMAAEMEQSSGTGPAELTQFWKEVPRNKVMEHRL 440
Query: 122 RVIYVSPPQP 131
R V +P
Sbjct: 441 RCHTVESSKP 450
>sp|P34593|YOD1_CAEEL Uncharacterized protein ZC262.1 OS=Caenorhabditis elegans
GN=ZC262.1 PE=4 SV=1
Length = 131
Score = 45.4 bits (106), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 53/101 (52%), Gaps = 3/101 (2%)
Query: 6 LLSIEPLELKFP-FELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRST 64
LL LE++F E +K IS +L+L N T V++KV+ T+ + V+P G V P T
Sbjct: 15 LLIYSSLEVEFKCTEDRKPISVNLKLHNPTAVTVSYKVRCTSADIFRVQPPLGFVKPSET 74
Query: 65 CDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINA 105
I++ Q Q + D K+ + +DG TA+++ A
Sbjct: 75 VSIVIWYQNQDKK--DAISKNHYFAFYHTNSDGRTARELWA 113
>sp|P34538|YNC5_CAEEL Uncharacterized protein R05D3.5 OS=Caenorhabditis elegans
GN=R05D3.5 PE=2 SV=3
Length = 178
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 7 LSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCD 66
L ++ +E K E +K IS +L+L N T V++KV+ T+ + V+P G V P T
Sbjct: 65 LQVQKVEFKCT-EDRKPISVNLKLHNPTAVTVSYKVRCTSADIFRVQPPLGFVKPSETVS 123
Query: 67 IIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTAKDINA 105
I++ Q Q + D K+ + +DG TA+++ A
Sbjct: 124 IVIWYQNQDKK--DAISKNHYFAFYHTNSDGRTARELWA 160
>sp|Q8BGG6|MSPD3_MOUSE Motile sperm domain-containing protein 3 OS=Mus musculus GN=Mospd3
PE=2 SV=1
Length = 235
Score = 35.8 bits (81), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 28 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQAQKEAPPDMQCKDKF 87
L L N T + F+V T P KY V G V P+S DI++ A P +D+F
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVIRHVA--PVPSHYDVQDRF 112
Query: 88 LLQSVKTNDGTTAKDIN 104
++ + +GT + +
Sbjct: 113 RIE--LSEEGTEGRVVG 127
>sp|O75425|MSPD3_HUMAN Motile sperm domain-containing protein 3 OS=Homo sapiens GN=MOSPD3
PE=2 SV=1
Length = 235
Score = 35.4 bits (80), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 28 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQAQKEAPPDMQCKDKF 87
L L N T + F+V T P KY V G V P+S DI++ A P +D+F
Sbjct: 55 LTLYNPTGTALRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVIRHVA--PIPSHYDVQDRF 112
>sp|Q3T033|MSPD3_BOVIN Motile sperm domain-containing protein 3 OS=Bos taurus GN=MOSPD3
PE=2 SV=1
Length = 235
Score = 35.4 bits (80), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Query: 28 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQAQKEAPPDMQCKDKF 87
L L N T + F+V T P KY V G V P+S DI++ A P + +D+F
Sbjct: 55 LTLYNPTGAVLRFRVLCTAPAKYTVFDAEGYVKPQSCIDIVIRHVAPH--PRNYDVQDRF 112
Query: 88 LLQSVKTNDGTTAKDIN 104
++ + +GT + +
Sbjct: 113 RIE--LSEEGTEGRVVG 127
>sp|Q9QZY7|CD1C2_CAVPO T-cell surface glycoprotein CD1c2 OS=Cavia porcellus GN=CD1C2 PE=2
SV=1
Length = 332
Score = 35.0 bits (79), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 13/129 (10%)
Query: 12 LELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTN----PKKYCVRPNTGIVLPRSTCDI 67
L+ K+PF+++ ++ C L T +++ N K CV G + CDI
Sbjct: 106 LQFKYPFDIQVRLGCELHSRETTKSFLHVAFNGLNFLSFQHKSCVPSPEGETRAQKACDI 165
Query: 68 IVTMQAQKEAPPDMQ---CKDKFLLQSVKTNDGTTAKDINAEMF-----NKEAGHVVEEC 119
+ T +A KE + C + LL ++ + + E++ N E G ++ C
Sbjct: 166 LNTYEATKEIAYYVMNDICP-RLLLSLLEAGKMDLQRQVRPEVWLSSSPNLEPGRLLLAC 224
Query: 120 KLRVIYVSP 128
+ Y P
Sbjct: 225 HVSGFYPKP 233
>sp|O45433|SSP32_CAEEL Sperm-specific class P protein 32 OS=Caenorhabditis elegans
GN=ssp-32 PE=2 SV=1
Length = 107
Score = 34.7 bits (78), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 6 LLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPR 62
+L+IEP FP S + +++ ++ +AFKVK++N + Y VRP G V R
Sbjct: 1 MLTIEPPSATFP---ASGGSSTHTITSVNESRMAFKVKSSNNEHYRVRPVYGFVEAR 54
>sp|P78615|FAS2_EMEND Fatty acid synthase subunit alpha OS=Emericella nidulans GN=fasA
PE=3 SV=1
Length = 1858
Score = 33.9 bits (76), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 110 KEAG-HVVEECKLRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFT 168
KE G ++E CK V+ VSP VP G + RG++ E+ RA
Sbjct: 465 KELGEQLIENCK-EVLGVSPVYKDVAVPTGPQTTIDARGNI---------EYQEVPRASA 514
Query: 169 ERIEHQDKSTEARALISKLKDEKNNAVQQNNKLRQDLELLRRE 211
++EH K IS E +N + N LR +L+RR+
Sbjct: 515 RKLEHYVKQMAEGGPIS----EYSNRAKVQNDLRSVYKLIRRQ 553
>sp|Q9QZY8|CD1C1_CAVPO T-cell surface glycoprotein CD1c1 OS=Cavia porcellus GN=CD1C1 PE=2
SV=1
Length = 332
Score = 33.5 bits (75), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 13/129 (10%)
Query: 12 LELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKY----CVRPNTGIVLPRSTCDI 67
LE+K+PFE++ + C L T ++ V N Y V G + CD+
Sbjct: 106 LEVKYPFEVQARAGCELHSGEHTKGFIHAAVNGLNFLSYQNKSLVPSPEGGTRAQKFCDL 165
Query: 68 IVTMQAQKEAPPDMQCKD---KFLLQSVKTNDGTTAKDINAEMF-----NKEAGHVVEEC 119
T + +E + +D +FLL + + + E++ N E G ++ C
Sbjct: 166 FNTYEGIRETVYYL-IRDTCPRFLLGLLDAGKMDLQRQVRPEVWLSSSPNLEPGRLLLAC 224
Query: 120 KLRVIYVSP 128
+ Y P
Sbjct: 225 HVSGFYPKP 233
>sp|Q96JG9|ZN469_HUMAN Zinc finger protein 469 OS=Homo sapiens GN=ZNF469 PE=2 SV=3
Length = 3925
Score = 32.7 bits (73), Expect = 2.3, Method: Composition-based stats.
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 128 PPQPPSPVPEGSEEGSSPRG 147
PP P P+P+GS G SPRG
Sbjct: 251 PPAEPEPIPKGSRPGGSPRG 270
>sp|P53022|MSP2_GLORO Major sperm protein 2 OS=Globodera rostochiensis GN=MSP-2 PE=2 SV=2
Length = 126
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/100 (19%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Query: 1 MSTGELLSIEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVL 60
+ G++ ++ ++ F + + +++ N N + F KTT PK+ + P G++
Sbjct: 4 LPPGDIATMPNQKVVFNAPFDNKATYYVRVINPGTNRIGFAFKTTKPKRINMNPPNGVLG 63
Query: 61 PRSTCDIIVTMQAQKEAPPDMQCKDKFLLQSVKTNDGTTA 100
P+ + ++ ++ A + D + D+ ++ T D A
Sbjct: 64 PKESVNVAISCDAFDPSSEDTK-GDRVTVEWCNTPDPAAA 102
>sp|O50399|DNAE2_MYCTU Error-prone DNA polymerase OS=Mycobacterium tuberculosis GN=dnaE2
PE=2 SV=4
Length = 1098
Score = 32.3 bits (72), Expect = 3.0, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 112 AGHVVEECKLRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERI 171
A + E C + ++P PP VP+G E S R V +A RA+++ I
Sbjct: 325 AAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQ-I 383
Query: 172 EHQDK 176
EH+ K
Sbjct: 384 EHELK 388
>sp|Q7TWL9|DNAE2_MYCBO Error-prone DNA polymerase OS=Mycobacterium bovis (strain ATCC
BAA-935 / AF2122/97) GN=dnaE2 PE=3 SV=2
Length = 1091
Score = 32.3 bits (72), Expect = 3.0, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 1/65 (1%)
Query: 112 AGHVVEECKLRVIYVSPPQPPSPVPEGSEEGSSPRGSVSDNGHVNSAEFAAAARAFTERI 171
A + E C + ++P PP VP+G E S R V +A RA+++ I
Sbjct: 318 AAELGERCAFGLQLIAPRLPPFDVPDGHTEDSWLRSLVMAGARERYGPPKSAPRAYSQ-I 376
Query: 172 EHQDK 176
EH+ K
Sbjct: 377 EHELK 381
>sp|O01829|SSP19_CAEEL Sperm-specific class P protein 19 OS=Caenorhabditis elegans
GN=ssp-19 PE=1 SV=1
Length = 109
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 28/50 (56%)
Query: 24 ISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQA 73
+S + +L N + FK+K++N +Y + P G V P + D+++T A
Sbjct: 17 VSSTHKLVNGGAEKIVFKIKSSNNNEYRIAPVFGFVDPSGSKDVVITRTA 66
>sp|Q8CFA7|KLF17_MOUSE Krueppel-like factor 17 OS=Mus musculus GN=Klf17 PE=1 SV=2
Length = 341
Score = 31.6 bits (70), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 6/55 (10%)
Query: 130 QPPSPVPEGSEEGSSPRGSVSDNGHVNS---AEFAAAARAFTER---IEHQDKST 178
+PP+P PEG+E S+ RG+ V+ + + +++T+R + HQ K T
Sbjct: 227 EPPTPAPEGAESPSTSRGATRRQSPVSRPYVCTYNSCGKSYTKRSHLVSHQRKHT 281
>sp|A3LZ54|MED14_PICST Mediator of RNA polymerase II transcription subunit 14
OS=Scheffersomyces stipitis (strain ATCC 58785 / CBS
6054 / NBRC 10063 / NRRL Y-11545) GN=RGR1 PE=3 SV=3
Length = 1112
Score = 31.2 bits (69), Expect = 6.4, Method: Composition-based stats.
Identities = 23/86 (26%), Positives = 38/86 (44%), Gaps = 5/86 (5%)
Query: 29 QLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQAQKEAPPDMQCKDKFL 88
Q+S T + + K T +C+ P TG+ C + + + +PP + F+
Sbjct: 475 QISYITPHQLLIKSSPTKSTIFCINPLTGLFYFIDPCPVQNLIAKKINSPPTVVKNKNFV 534
Query: 89 LQSVKTN---DGTTAKDINAEMFNKE 111
+S N DG T + E+FNKE
Sbjct: 535 AESDMVNTIVDGLT--QLRLEIFNKE 558
>sp|Q6FJI3|HSP7F_CANGA Heat shock protein homolog SSE1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SSE1 PE=3 SV=1
Length = 694
Score = 31.2 bits (69), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 86/204 (42%), Gaps = 22/204 (10%)
Query: 16 FPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIVTMQA-- 73
F FE Q S S + + ++ +V N P+T ++ + D +M+A
Sbjct: 392 FKFEDIHQFSVSYKWDKQVEDEDHLEVFPANSN----FPSTKLITLHRSGDF--SMEANY 445
Query: 74 --QKEAPPDMQCK-DKFLLQSVKTNDGTTAKDINAEMFNKEAG-HVVEEC-KLRVIYVSP 128
++E PP + K+ + V+ +G T+ + ++ +G H++EE L I V
Sbjct: 446 TNKEELPPHLDANIAKWDITGVQIPEGETSVPVKLKLRCDPSGLHIIEEAYSLEDIVV-- 503
Query: 129 PQPPSPVPEGSEEGSSP------RGSVSDNGHVNSAEFAAAARAFTERIEHQDKSTEARA 182
+ P+PE + E + P + D + + F A IE ++ T
Sbjct: 504 -KEEVPLPEDAPEDAVPEVKEVTKTVKKDTLEITAHTFTLADDKLNTLIEKENDMTAQDR 562
Query: 183 LISKLKDEKNNAVQQNNKLRQDLE 206
L+++ +D KNN + LR L+
Sbjct: 563 LVAETEDRKNNLEEYIYTLRGKLD 586
>sp|Q9UJG1|MSPD1_HUMAN Motile sperm domain-containing protein 1 OS=Homo sapiens
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 31.2 bits (69), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 9 IEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDII 68
+ P EL F + + L L N + + FKV T P KY V G V P+ DI+
Sbjct: 19 VFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKPQCCVDIV 78
Query: 69 V 69
+
Sbjct: 79 I 79
>sp|Q8VEL0|MSPD1_MOUSE Motile sperm domain-containing protein 1 OS=Mus musculus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 31.2 bits (69), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 28/61 (45%)
Query: 9 IEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDII 68
+ P EL F + + L L N + + FKV T P KY V G V P+ DI+
Sbjct: 19 VFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVDAAGAVKPQCCVDIV 78
Query: 69 V 69
+
Sbjct: 79 I 79
>sp|Q5RJS6|MSPD1_RAT Motile sperm domain-containing protein 1 OS=Rattus norvegicus
GN=Mospd1 PE=2 SV=1
Length = 213
Score = 30.8 bits (68), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 28 LQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDIIV 69
L L N + + FKV T P KY V G V P+ DI++
Sbjct: 38 LTLYNPYEFALKFKVLCTTPNKYVVIDAAGAVKPQCCVDIVI 79
>sp|Q5RCC7|MSPD1_PONAB Motile sperm domain-containing protein 1 OS=Pongo abelii
GN=MOSPD1 PE=2 SV=1
Length = 213
Score = 30.8 bits (68), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 9 IEPLELKFPFELKKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDII 68
+ P EL F + + L L N + + FKV T P KY V G V P+ DI+
Sbjct: 19 VFPTELIFYADDQSTHKQVLTLYNPYEFALKFKVLCTTPNKYVVVNAAGAVKPQCCVDIV 78
Query: 69 VTMQAQKEAPPDMQCKDKFLLQ 90
+ + + DKF LQ
Sbjct: 79 IRHRDVRSC--HYGVIDKFRLQ 98
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.131 0.367
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,311,592
Number of Sequences: 539616
Number of extensions: 3729603
Number of successful extensions: 13401
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 13303
Number of HSP's gapped (non-prelim): 121
length of query: 241
length of database: 191,569,459
effective HSP length: 114
effective length of query: 127
effective length of database: 130,053,235
effective search space: 16516760845
effective search space used: 16516760845
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)