BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026269
(241 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q941D3|PAP8_ARATH Probable plastid-lipid-associated protein 8, chloroplastic
OS=Arabidopsis thaliana GN=PAP8 PE=2 SV=1
Length = 239
Score = 320 bits (819), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 159/241 (65%), Positives = 194/241 (80%), Gaps = 7/241 (2%)
Query: 1 MAAAAFSLTLSSPVSKPHTFCTSYYSKPINASFSASLPCK----RSPRTALKIVRAVSIS 56
MAA A SLT++S S+P T S S+ +N S+P K RS R L +V +VS
Sbjct: 1 MAATASSLTIASSFSEPRTQIHS--SRRLNLPLQYSIPYKVLRSRSRRLGL-VVSSVSAP 57
Query: 57 SPDLRTGPDDLVASILSKVNQSDGGVSLAKEEHKEVAEVAQELQKYCVEAPVKCPLIFGE 116
+ +LRTGPDDL++++LSKV SDGGV+L+ E+HKEVA+VA ELQKYCV+ PVK PLIFG+
Sbjct: 58 NVELRTGPDDLISTLLSKVANSDGGVTLSPEQHKEVAQVAGELQKYCVKEPVKNPLIFGD 117
Query: 117 WDVVYCSVPTSPGGGYRSAFGRLFFKTKEMIQAVEAPDTVRNKVSFTALGFLDGEVSLKG 176
W+VVYCS PTSPGGGYRS GRLFFKTKEMIQA++APD VRNKVS A GFLDG+VSL G
Sbjct: 118 WEVVYCSRPTSPGGGYRSVIGRLFFKTKEMIQAIDAPDIVRNKVSINAFGFLDGDVSLTG 177
Query: 177 KLNALDEKWIQVVFEPPELKVGGLEFRYGGQSEVKLQITYIDEKIRLGLGSRGSLFVFQR 236
KL ALD +W+QV+FEPPE+KVG LEF+YG +SEVKL+ITY+DEK+RLGLGS+GSLFVF+R
Sbjct: 178 KLKALDSEWVQVIFEPPEIKVGSLEFKYGFESEVKLRITYVDEKLRLGLGSKGSLFVFRR 237
Query: 237 R 237
R
Sbjct: 238 R 238
>sp|Q9LU85|PAP4_ARATH Probable plastid-lipid-associated protein 4, chloroplastic
OS=Arabidopsis thaliana GN=PAP4 PE=1 SV=1
Length = 242
Score = 44.3 bits (103), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/170 (20%), Positives = 85/170 (50%), Gaps = 12/170 (7%)
Query: 67 LVASILSKVNQSDGGVSLAKEEHKEVAEVAQELQKYC-VEAPVKCPLIFGEWDVVYCSVP 125
L +L + + G + + ++ + ++A++++ + P+K L+ G+W+++Y +
Sbjct: 74 LKQELLEAIEPLERGATASPDDQLRIDQLARKVEAVNPTKEPLKSDLVNGKWELIYTT-- 131
Query: 126 TSPGGGYRSAFGRLFFKTKEMIQAVEAPDTVRNKVSFTALGFLDGEVSLKGKLNALDEKW 185
A F ++ Q++ DT++ + + F + S+ G + L+ K
Sbjct: 132 ---SASILQAKKPRFLRSITNYQSINV-DTLKVQ-NMETWPFYN---SVTGDIKPLNSKK 183
Query: 186 IQVVFEPPELKVGGLEFRYGGQSEVKLQITYIDEKIRLGLGSRGSLFVFQ 235
+ V + ++ +G + + + +L+ITY+DE++RL G +G+LF+ +
Sbjct: 184 VAVKLQVFKI-LGFIPIKAPDSARGELEITYVDEELRLSRGDKGNLFILK 232
>sp|Q5M755|PAP7_ARATH Probable plastid-lipid-associated protein 7, chloroplastic
OS=Arabidopsis thaliana GN=PAP7 PE=2 SV=1
Length = 273
Score = 37.4 bits (85), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Query: 113 IFGEWDVVYCSVPTSPGGGYRSAFG-RLFFKTKEMIQAVEAPD--TVRN-KVSFTALGFL 168
I G W ++Y ++ G R+ G R F +++Q ++ TV K L L
Sbjct: 135 IGGCWKLIYSTITVL--GSKRTKLGLRDFVSLGDLLQQIDIAQGKTVHVLKFDVRGLNLL 192
Query: 169 DGEVSLKGKLNALDEKWIQVVFEPPELKVGGLEFRYGGQSEVKL---------QITYIDE 219
DGE + + +++ +E +K L + ++ L +I+Y+DE
Sbjct: 193 DGEFRIVASFKISSKSSVEITYESSTIKPDQLMNIFRKNMDLLLGIFNPEGLFEISYLDE 252
Query: 220 KIRLGLGSRGSLFVFQR 236
+++G +G++FV +R
Sbjct: 253 DLQVGRDGKGNVFVLER 269
>sp|Q9LZJ5|AB14C_ARATH ABC transporter C family member 14 OS=Arabidopsis thaliana GN=ABCC14
PE=1 SV=1
Length = 1539
Score = 34.7 bits (78), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 26/152 (17%)
Query: 48 KIVRAVSISSPDLRTGPDDLVASILSKVNQSDGGVSLAKEEHKEVAEVAQELQK-YCVEA 106
+++R S+ SP L D+ + S L N + G L KEE +EV +V+ ++ K Y EA
Sbjct: 916 RVLRTTSMESPRLSELNDESIKSFLGS-NIPEDGSRLIKEEEREVGQVSFQVYKLYSTEA 974
Query: 107 PVKCPLIFGEWD---VVYCSVPTSP---GGGYRSAF-----------GRLFFKTKEMIQA 149
+G W VV+ SV Y A+ +F + +I A
Sbjct: 975 -------YGWWGMILVVFFSVAWQASLMASDYWLAYETSAKNEVSFDATVFIRVYVIIAA 1027
Query: 150 VEAPDTVRNKVSFTALGFLDGEVSLKGKLNAL 181
V T LG ++ K LN+L
Sbjct: 1028 VSIVLVCLRAFYVTHLGLKTAQIFFKQILNSL 1059
>sp|Q9LX99|GRIMP_ARATH Geminivirus Rep-interacting motor protein OS=Arabidopsis thaliana
GN=GRIMP PE=1 SV=1
Length = 1273
Score = 34.7 bits (78), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 27 KPINASFSASLPCKRSPRTALKIVRAVSISSPDLRTGPDDLVASILSKVNQSDGGVSLAK 86
+P +S +AS RT ++R SIS+P L P +AS KVN V LAK
Sbjct: 19 EPRKSSSNASFAESTGHRTTGPLLRRNSISTPSL--PPKQAIAS---KVNGLKEKVKLAK 73
Query: 87 EEHKEVAEVAQELQKYC 103
E++ E+ + A +LQ+Y
Sbjct: 74 EDYLELRQEATDLQEYS 90
>sp|Q7DM58|AB4C_ARATH ABC transporter C family member 4 OS=Arabidopsis thaliana GN=ABCC4
PE=1 SV=2
Length = 1516
Score = 34.3 bits (77), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 37/84 (44%), Gaps = 17/84 (20%)
Query: 38 PCKRSPRTALKIVRAVSISSPDLRTGPDDLVASILSKVNQSDGGVSLAKEEHKEVAEVAQ 97
P SPRT S+ SP L D+ + S L DG L KEE +E +V+
Sbjct: 891 PHASSPRT--------SMESPHLSDLNDEHIKSFLGSHIVEDGS-KLIKEEERETGQVSL 941
Query: 98 ELQK-YCVEAPVKCPLIFGEWDVV 120
+ K YC EA +G W +V
Sbjct: 942 GVYKQYCTEA-------YGWWGIV 958
>sp|Q6DBN2|PAP5_ARATH Probable plastid-lipid-associated protein 5, chloroplastic
OS=Arabidopsis thaliana GN=PAP5 PE=2 SV=1
Length = 234
Score = 34.3 bits (77), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 76/157 (48%), Gaps = 13/157 (8%)
Query: 81 GVSLAKEEHKEVAEVAQELQKYC-VEAPVKCPLIFGEWDVVYCSVPTSPGGGYRSAFGRL 139
G + + ++ + ++A++++ + P+K LI G+W+++Y + A
Sbjct: 79 GATASPDDQLLIDQLARKVEAVNPTKEPLKSDLINGKWELIYTT-----SAAILQAKKPR 133
Query: 140 FFKTKEMIQAVEAPDTVRNKVSFTALGFLDGEVSLKGKLNALDEKWIQVVFEPPELKVGG 199
F ++ Q + DT++ + F + S+ G L L+ K + V + ++ +G
Sbjct: 134 FLRSLTNYQCINM-DTLKVQ-RMETWPFYN---SVTGDLTPLNSKTVAVKLQVFKI-LGF 187
Query: 200 LEFRY-GGQSEVKLQITYIDEKIRLGLGSRGSLFVFQ 235
+ + G + +L+ITY+DE++R+ G LF+ +
Sbjct: 188 IPVKAPDGTARGELEITYVDEELRISRGKGNLLFILK 224
>sp|Q9K809|SPPA_BACHD Putative signal peptide peptidase SppA OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=sppA PE=3 SV=1
Length = 331
Score = 32.7 bits (73), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 61 RTGPDDLVASILSKVNQSDGGVSLAKEEHKEVAEVAQELQK 101
+ G D +A I+ +VN GGV + E HK+V E+ Q+ +K
Sbjct: 93 KAGEDPNIAGIILQVNTPGGGVLESAEIHKQVEEIVQDSEK 133
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic OS=Citrus unshiu
GN=PAP PE=2 SV=1
Length = 323
Score = 32.3 bits (72), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 61/141 (43%), Gaps = 12/141 (8%)
Query: 57 SPDLRTGPDDLVASILSKVNQSDGGVSLAKEEHKEVAEVAQELQ-KYCVEAPVKC-PLIF 114
SP T D+L +++ +D G++ E E+ E+ +L+ K AP + L+
Sbjct: 89 SPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLN 148
Query: 115 GEWDVVYCSVPTSPGGGYRSAFGR---LFFKTKEMIQAVEAPD-TVRNKVSFTALGFLDG 170
+W +VY S G R + +E+ Q +++ + TV+N + F A
Sbjct: 149 AKWILVYTSF-----SGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQF-AGPLATT 202
Query: 171 EVSLKGKLNALDEKWIQVVFE 191
+S K K +Q+ FE
Sbjct: 203 SISTNAKFEVRSPKRVQIKFE 223
>sp|Q9LW57|PAP6_ARATH Probable plastid-lipid-associated protein 6, chloroplastic
OS=Arabidopsis thaliana GN=PAP6 PE=1 SV=1
Length = 284
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 66/172 (38%), Gaps = 25/172 (14%)
Query: 88 EHKEVAEVAQELQKYCVEAPVKCPLIFGEWDVVYCSVPTSPG-GGYRSAF--GRLFFKT- 143
E EVA E V+ + G+W ++Y S +S GG R GRL T
Sbjct: 110 ERAEVAAKELETAGGPVDLTDDLDKLQGKWRLLYSSAFSSRSLGGSRPGLPTGRLIPVTL 169
Query: 144 KEMIQAVEAPDTVRNKVSFTALGF------LDGEVSLKGKLNALDEKWIQVVFEPPELKV 197
++ Q ++ + ++ LG L+ +L K L I++ FE +K
Sbjct: 170 GQVFQRIDVFSKDFDNIAEVELGAPWPFPPLEATATLAHKFELLGTCKIKITFEKTTVKT 229
Query: 198 GGL--------------EFRYGGQSEV-KLQITYIDEKIRLGLGSRGSLFVF 234
G FR ++TY+D+ +R+ G RG L VF
Sbjct: 230 SGNLSQIPPFDIPRLPDSFRPSSNPGTGDFEVTYVDDTMRITRGDRGELRVF 281
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,376,386
Number of Sequences: 539616
Number of extensions: 3400335
Number of successful extensions: 7925
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 7916
Number of HSP's gapped (non-prelim): 17
length of query: 241
length of database: 191,569,459
effective HSP length: 114
effective length of query: 127
effective length of database: 130,053,235
effective search space: 16516760845
effective search space used: 16516760845
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)