Query 026270
Match_columns 241
No_of_seqs 199 out of 1994
Neff 7.2
Searched_HMMs 46136
Date Fri Mar 29 05:49:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026270.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/026270hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 cd01910 Wali7 This domain is p 100.0 3.5E-52 7.5E-57 354.4 24.3 222 2-226 1-224 (224)
2 PF12481 DUF3700: Aluminium in 100.0 1.8E-46 3.9E-51 314.4 20.6 224 2-226 1-228 (228)
3 PLN02549 asparagine synthase ( 100.0 1.4E-40 3.1E-45 320.0 21.6 189 1-208 1-196 (578)
4 PRK09431 asnB asparagine synth 100.0 2.6E-40 5.7E-45 317.3 21.7 171 27-207 18-196 (554)
5 PTZ00077 asparagine synthetase 100.0 7.1E-40 1.5E-44 315.9 21.1 189 1-208 1-206 (586)
6 COG0367 AsnB Asparagine syntha 100.0 1.4E-38 3E-43 304.7 19.7 189 1-210 1-204 (542)
7 PRK07631 amidophosphoribosyltr 100.0 1E-37 2.3E-42 293.3 21.9 206 1-224 11-265 (475)
8 PRK08525 amidophosphoribosyltr 100.0 2E-37 4.3E-42 290.5 23.0 207 1-224 1-257 (445)
9 TIGR03104 trio_amidotrans aspa 100.0 3.8E-37 8.2E-42 297.9 21.5 187 1-207 1-227 (589)
10 PRK07272 amidophosphoribosyltr 100.0 1.1E-36 2.5E-41 286.8 22.3 209 1-226 11-269 (484)
11 PRK06781 amidophosphoribosyltr 100.0 3.2E-36 7E-41 283.3 23.2 207 1-225 11-266 (471)
12 cd00712 AsnB Glutamine amidotr 100.0 5.7E-36 1.2E-40 256.8 22.2 168 27-204 16-220 (220)
13 PRK07349 amidophosphoribosyltr 100.0 3.5E-36 7.6E-41 284.3 22.6 208 1-224 33-294 (500)
14 PRK06388 amidophosphoribosyltr 100.0 3.6E-36 7.7E-41 283.1 22.0 205 1-223 19-272 (474)
15 TIGR03108 eps_aminotran_1 exos 100.0 3.6E-36 7.7E-41 293.2 21.0 189 1-207 1-228 (628)
16 PRK07847 amidophosphoribosyltr 100.0 1.3E-35 2.8E-40 281.1 22.8 207 1-224 23-284 (510)
17 PRK09123 amidophosphoribosyltr 100.0 1.2E-35 2.7E-40 280.0 22.5 206 1-224 21-277 (479)
18 PRK08341 amidophosphoribosyltr 100.0 2.5E-35 5.4E-40 275.4 21.8 201 1-223 4-252 (442)
19 PRK05793 amidophosphoribosyltr 100.0 4.3E-35 9.3E-40 276.2 22.2 209 1-225 14-271 (469)
20 PLN02440 amidophosphoribosyltr 100.0 1.8E-34 4E-39 272.6 22.1 206 1-223 1-256 (479)
21 TIGR01536 asn_synth_AEB aspara 100.0 2E-34 4.4E-39 272.0 21.7 168 27-204 15-222 (467)
22 cd03766 Gn_AT_II_novel Gn_AT_I 100.0 7.7E-35 1.7E-39 243.3 15.9 172 1-191 1-180 (181)
23 PRK09246 amidophosphoribosyltr 100.0 2.4E-34 5.3E-39 273.1 20.5 209 1-225 1-272 (501)
24 TIGR01134 purF amidophosphorib 100.0 1.5E-33 3.2E-38 264.3 23.2 193 27-224 14-255 (442)
25 cd00715 GPATase_N Glutamine am 100.0 2.2E-33 4.7E-38 245.7 22.4 190 27-220 13-252 (252)
26 KOG0571 Asparagine synthase (g 100.0 2.7E-34 5.9E-39 260.1 10.8 190 1-209 1-197 (543)
27 COG0034 PurF Glutamine phospho 100.0 5.5E-32 1.2E-36 247.9 19.6 209 1-224 4-265 (470)
28 cd00714 GFAT Glutamine amidotr 100.0 2.9E-31 6.4E-36 227.2 18.2 160 27-193 13-214 (215)
29 PRK00331 glucosamine--fructose 100.0 9.5E-31 2.1E-35 254.1 20.9 183 1-203 1-225 (604)
30 cd01907 GlxB Glutamine amidotr 100.0 2.3E-29 5.1E-34 220.0 18.5 160 27-193 16-248 (249)
31 TIGR01135 glmS glucosamine--fr 100.0 2.7E-29 5.8E-34 244.1 20.2 169 28-203 14-224 (607)
32 cd01909 betaLS_CarA_N Glutamin 100.0 3.6E-29 7.7E-34 211.5 16.4 121 73-205 49-199 (199)
33 PTZ00295 glucosamine-fructose- 100.0 1.7E-28 3.6E-33 239.9 20.0 183 1-203 24-255 (640)
34 KOG0572 Glutamine phosphoribos 100.0 2.6E-28 5.5E-33 218.6 18.6 198 35-236 24-288 (474)
35 cd00352 Gn_AT_II Glutamine ami 100.0 4.3E-28 9.4E-33 205.7 18.4 160 31-192 21-220 (220)
36 PF13537 GATase_7: Glutamine a 99.9 6E-27 1.3E-31 184.4 10.7 107 62-177 9-125 (125)
37 PLN02981 glucosamine:fructose- 99.9 1E-25 2.2E-30 221.3 19.3 171 27-203 20-277 (680)
38 PTZ00394 glucosamine-fructose- 99.9 1.4E-24 3.1E-29 212.7 19.5 145 53-203 99-280 (670)
39 PF13522 GATase_6: Glutamine a 99.9 3.5E-24 7.6E-29 170.5 13.5 120 42-171 1-133 (133)
40 COG0449 GlmS Glucosamine 6-pho 99.9 7.5E-21 1.6E-25 181.4 16.3 181 1-203 1-221 (597)
41 KOG0573 Asparagine synthase [A 99.7 1.2E-16 2.5E-21 146.5 13.1 164 1-189 1-171 (520)
42 cd00713 GltS Glutamine amidotr 99.7 7.8E-16 1.7E-20 142.5 15.3 136 52-198 202-396 (413)
43 cd01908 YafJ Glutamine amidotr 99.6 2.1E-15 4.5E-20 132.4 12.8 135 52-197 81-257 (257)
44 TIGR03442 conserved hypothetic 99.6 4.2E-15 9.1E-20 130.3 13.3 134 53-201 84-248 (251)
45 KOG1268 Glucosamine 6-phosphat 99.5 3.6E-13 7.8E-18 125.6 14.4 145 52-202 80-284 (670)
46 PF00310 GATase_2: Glutamine a 99.4 1E-12 2.2E-17 120.6 10.2 114 49-172 193-361 (361)
47 PRK11750 gltB glutamate syntha 99.1 9.3E-10 2E-14 114.1 12.9 71 124-196 332-404 (1485)
48 PF13230 GATase_4: Glutamine a 98.9 2.5E-08 5.3E-13 88.5 11.3 141 53-200 73-254 (271)
49 PF09147 DUF1933: Domain of un 98.1 5.8E-05 1.3E-09 62.3 11.7 109 74-194 47-186 (201)
50 COG0121 Predicted glutamine am 97.7 0.00064 1.4E-08 59.8 11.5 38 53-90 72-116 (252)
51 COG0067 GltB Glutamate synthas 97.4 0.0016 3.4E-08 60.1 11.1 135 51-199 202-363 (371)
52 KOG0399 Glutamate synthase [Am 92.3 0.79 1.7E-05 48.3 9.1 71 124-196 406-478 (2142)
53 PF10736 DUF2527: Protein of u 68.1 1.6 3.4E-05 26.5 -0.1 9 1-9 1-9 (38)
54 COG0067 GltB Glutamate synthas 52.3 17 0.00038 33.8 3.7 47 124-172 323-369 (371)
55 PF04566 RNA_pol_Rpb2_4: RNA p 47.1 29 0.00062 23.8 3.3 27 132-159 33-61 (63)
56 PF08973 TM1506: Domain of unk 31.8 21 0.00045 28.5 0.7 26 129-157 10-35 (134)
57 TIGR03823 FliZ flagellar regul 31.4 33 0.00071 28.1 1.8 20 74-93 33-52 (168)
58 PRK11582 flagella biosynthesis 31.3 34 0.00073 28.0 1.8 20 74-93 33-52 (169)
59 PF00310 GATase_2: Glutamine a 27.7 36 0.00079 31.5 1.7 16 27-42 18-33 (361)
60 COG4911 Uncharacterized conser 26.2 67 0.0015 24.7 2.6 25 120-144 73-97 (123)
61 KOG0278 Serine/threonine kinas 21.9 2E+02 0.0043 25.8 5.0 27 181-207 188-214 (334)
62 COG4315 Uncharacterized protei 20.3 92 0.002 24.4 2.4 32 125-161 86-117 (138)
No 1
>cd01910 Wali7 This domain is present in Wali7, a protein of unknown function, expressed in wheat and induced by aluminum. Wali7 has a single domain similar to the glutamine amidotransferase domain of glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The Wali7 domain is also somewhat similar to the Ntn hydrolase fold of the proteasomal alph and beta subunits.
Probab=100.00 E-value=3.5e-52 Score=354.39 Aligned_cols=222 Identities=64% Similarity=1.096 Sum_probs=198.3
Q ss_pred eeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEcCcEEEEEeeCCCCCCCCceEeeCCcEEEEEe
Q 026270 2 LGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQNESPLRQRSFAVKDEIFCLFE 81 (241)
Q Consensus 2 ~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~~~~~l~~~~~~~~~~~QP~~~~~~~~~lv~n 81 (241)
|+||.++++++||+|++|.+... .....++++.+....|+...+.+++++.||+++..++.-.|.+++.++++++++|
T Consensus 1 laif~~~~~~~p~el~~~~~~~~--~~~~~~~~~~f~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~rl~~~~~~~~~vfn 78 (224)
T cd01910 1 LAVFSKAVAKPPEELVSAGSRTP--AKTAEELLKRFLSANPSAVFVHLGAAGFLAYSHHNQSPLHPRLFAVKDDIFCLFQ 78 (224)
T ss_pred CcccccccCCCChHHcCCCcccc--CCCHHHHHHHHHhcCCCcEEEEcCCceEEEEecCCCCcccCcEECCCCCEEEEEE
Confidence 68999999999999999886643 3344679999999999999999999999999887666667888888889999999
Q ss_pred eEEcchhhHHHHhCCCCCCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEe
Q 026270 82 GALDNLGSLRQQYGLAKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGIT 161 (241)
Q Consensus 82 G~I~N~~~L~~~lg~~~~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~ 161 (241)
|+|||+.+|+++|+...+.+|+++++++|++|+|+|+.+..+++++|+|+|||+|||.+++++++|||++|++||||+..
T Consensus 79 GeIyN~~eLr~~lg~~~t~sD~evIl~lY~~~~d~G~y~~~~~l~~L~G~FAFvi~D~~~~~l~lARD~~Gi~PLYyg~~ 158 (224)
T cd01910 79 GHLDNLGSLKQQYGLSKTANEAMLVIEAYRTLRDRGPYPADQVVKDLEGSFAFVLYDKKTSTVFVASDADGSVPLYWGIA 158 (224)
T ss_pred eEEcCHHHHHHHhCCCCCCcHHHHHHHHHHHHHhcCCccHHHHHHhcCeEEEEEEEECCCCEEEEEEcCCCCcceEEEEe
Confidence 99999999999998744556666578999999888876667899999999999999999999999999999999999987
Q ss_pred CCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEEEEeCCCCCCccCCCCcce--eeCceeEE
Q 026270 162 ADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENPKNKITAVPAAEEE--IWGATFKL 226 (241)
Q Consensus 162 ~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~~~y~~~~~~~~~~~r~ds~--i~g~~~~~ 226 (241)
.+|.++||||+++|...|.+.+.+|||||||.. +|++++|++|.|+++++||+||+ |||++|||
T Consensus 159 ~dG~l~FASElkaL~~~c~~~~~~FPpG~~~~s-~ggl~~~~~p~~~~~~vp~~~s~g~~cg~~f~v 224 (224)
T cd01910 159 ADGSVVFSDDVELVKASCGKSFAPFPKGCFFHS-EGGLRSFEHPMNKLKAVPRVDSEGEMCGATFKV 224 (224)
T ss_pred CCCEEEEEeCHHHhhhhhccEEEEECCCCEEeC-CCCEEEeeCCCchhhcCCcccCcccEecceeeC
Confidence 678999999999999999888999999999987 78899999999999999999998 99999996
No 2
>PF12481 DUF3700: Aluminium induced protein ; InterPro: IPR024286 This entry represents a domain found in plant proteins that is approximately 120 amino acids in length. There are two conserved sequence motifs: YGL and LRDR.
Probab=100.00 E-value=1.8e-46 Score=314.43 Aligned_cols=224 Identities=55% Similarity=0.986 Sum_probs=211.4
Q ss_pred eeeeccCccCCchhhccCCCCCCC--CcchHHHHHHHhHcCCCCCcceEEcCcEEEEEeeCCCCCCCCceEeeCCcEEEE
Q 026270 2 LGVFSSAIVSPPEELVAAGSRTPS--PKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQNESPLRQRSFAVKDEIFCL 79 (241)
Q Consensus 2 ~gi~~~~~~~~~~~~~~~~~~~~~--~~~~~~~m~~~l~~RGpd~~~~~~~~~~~l~~~~~~~~~~~QP~~~~~~~~~lv 79 (241)
||||.+.++++||||++|++..+. +++...++++.+....|++..+.+++.+.||+++..++...|..+..-+++.++
T Consensus 1 LavF~k~va~~PeeL~sp~s~~~s~~~~k~~~ell~~F~s~~p~a~s~~~g~~~~lAys~~~~~~l~pR~F~~~DdIfCi 80 (228)
T PF12481_consen 1 LAVFHKSVAKPPEELNSPASSLPSSKKPKGPEELLKDFVSANPNAFSMNFGDSAALAYSHSNQSSLHPRLFAGVDDIFCI 80 (228)
T ss_pred CcccccccCCCchHhcCcccCCCcccCCCCHHHHHHHHHHhCCCeEEEEcCCCEEEEEecCCCCccccccccccCCEEEE
Confidence 699999999999999999966543 688899999999999999999999999999999987777677777777889999
Q ss_pred EeeEEcchhhHHHHhCCCCCCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEE
Q 026270 80 FEGALDNLGSLRQQYGLAKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWG 159 (241)
Q Consensus 80 ~nG~I~N~~~L~~~lg~~~~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~ 159 (241)
|-|.|.|...|+++||++++.+|+++++++|+.+.|+||++..++++.|+|.||||+||..++++++|||+.|.-|||||
T Consensus 81 F~G~L~Nl~~L~qqYGLsK~~nEa~~vIEAYrtLRDRgPyPadqvv~~L~G~FaFVlyD~~~~tvf~A~d~~G~vpLyWG 160 (228)
T PF12481_consen 81 FLGSLENLCSLRQQYGLSKGANEAMFVIEAYRTLRDRGPYPADQVVKDLEGSFAFVLYDSKTGTVFVARDSDGSVPLYWG 160 (228)
T ss_pred EecchhhHHHHHHHhCcCcCcchhhhHHHHHHHhhccCCCChHHHHHhccCceEEEEEecCCCcEEEeecCCCCcceEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEEEEeCCCCCCccCCCCcce--eeCceeEE
Q 026270 160 ITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENPKNKITAVPAAEEE--IWGATFKL 226 (241)
Q Consensus 160 ~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~~~y~~~~~~~~~~~r~ds~--i~g~~~~~ 226 (241)
.+.||.++||++...|...|++.+.+||+|++|.++ +|+++|.+|.++++++||+||+ |||+||||
T Consensus 161 i~~DGslv~Sdd~~~ik~~C~kS~ApFP~Gc~f~S~-~Gl~sfehP~nk~k~~prvDseG~~cGa~FkV 228 (228)
T PF12481_consen 161 IAADGSLVFSDDLELIKEGCGKSFAPFPAGCFFSSE-GGLRSFEHPKNKVKAMPRVDSEGQMCGATFKV 228 (228)
T ss_pred EeCCCCEEEcCCHHHHHhhhhhccCCCCcceEEEec-CceEeecCCcccccccccccCcccCcceeeeC
Confidence 998899999999999999999999999999999884 7899999999999999999999 99999997
No 3
>PLN02549 asparagine synthase (glutamine-hydrolyzing)
Probab=100.00 E-value=1.4e-40 Score=320.03 Aligned_cols=189 Identities=24% Similarity=0.402 Sum_probs=161.3
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEcCcEEEEEeeC---CCCCCCCceEeeCCcEE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQ---NESPLRQRSFAVKDEIF 77 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~~~~~l~~~~~---~~~~~~QP~~~~~~~~~ 77 (241)
||||+|-- ..+ ... ......+.+|++.|.|||||+++++..++++|||.|. +...+.||+++.+++++
T Consensus 1 MCGI~g~~--~~~------~~~-~~~~~~~~~m~~~l~hRGPD~~g~~~~~~~~Lgh~RLsI~d~~~g~QP~~~~~~~~~ 71 (578)
T PLN02549 1 MCGILAVL--GCS------DDS-QAKRSRVLELSRRLRHRGPDWSGLYGNEDCYLAHERLAIMDPESGDQPLYNEDKTIV 71 (578)
T ss_pred CCcEEEEE--eCC------CCc-chhHHHHHHHHHHhcCcCCCccCEEEeCCeEEEEeeeeEeCCCCCCCCcCcCCCCEE
Confidence 99999942 111 000 0123567889999999999999999988899999984 33468899999888999
Q ss_pred EEEeeEEcchhhHHHHhC-C---CCCCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCCCC
Q 026270 78 CLFEGALDNLGSLRQQYG-L---AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGK 153 (241)
Q Consensus 78 lv~nG~I~N~~~L~~~lg-~---~~~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~ 153 (241)
+++||+|||+.+|+++|. + +.+|+|+ ++++|++|| .+++++|+|+|||++||..+++++++|||+|+
T Consensus 72 lv~NGEIyN~~eLr~~L~~~~f~t~sD~Ev--il~ly~~~G-------~~~~~~L~G~FAf~i~D~~~~~l~~aRD~~Gi 142 (578)
T PLN02549 72 VTANGEIYNHKELREKLKLHKFRTGSDCEV--IAHLYEEHG-------EEFVDMLDGMFSFVLLDTRDNSFIAARDHIGI 142 (578)
T ss_pred EEEEEEEEcHHHHHHHHHhCCCCCCCHHHH--HHHHHHHHH-------HHHHHhCCCceEEEEEECCCCEEEEEECCCCC
Confidence 999999999999999985 2 6778887 469999999 78999999999999999988999999999999
Q ss_pred ccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEEEEeCCCCC
Q 026270 154 VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENPKNK 208 (241)
Q Consensus 154 rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~~~y~~~~~~ 208 (241)
|||||+...++.++||||+++|...+. .|+.|||||++.++.+++++||++.+.
T Consensus 143 kPLyyg~~~~g~~~fASE~KaL~~~~~-~I~~lpPGh~l~~~~~~~~~y~~~~~~ 196 (578)
T PLN02549 143 TPLYIGWGLDGSVWFASEMKALCDDCE-RFEEFPPGHYYSSKAGGFRRWYNPPWF 196 (578)
T ss_pred CCeEEEEecCCeEEEEecHHHHHHHhC-CEEEeCCCeEEEEcCCCEEEEEecccC
Confidence 999999875578999999999998875 699999999999977779999998764
No 4
>PRK09431 asnB asparagine synthetase B; Provisional
Probab=100.00 E-value=2.6e-40 Score=317.33 Aligned_cols=171 Identities=21% Similarity=0.399 Sum_probs=153.0
Q ss_pred cchHHHHHHHhHcCCCCCcceEEcCcEEEEEeeC---CCCCCCCceEeeCCcEEEEEeeEEcchhhHHHHhC--C---CC
Q 026270 27 KTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQ---NESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYG--L---AK 98 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~~~~~l~~~~~---~~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~lg--~---~~ 98 (241)
...+.+|++.|.|||||+.+++..++++|||+|. +...+.||+.+.++++++++||||||+.+|+++|. + +.
T Consensus 18 ~~~~~~m~~~l~hRGPD~~g~~~~~~~~lgh~RLsIid~~~g~QP~~~~~~~~~lv~NGEIyN~~eLr~~L~~~~~f~t~ 97 (554)
T PRK09431 18 RKKALEMSRLMRHRGPDWSGIYASDNAILGHERLSIVDVNGGAQPLYNEDGTHVLAVNGEIYNHQELRAELGDKYAFQTG 97 (554)
T ss_pred HHHHHHHHHHhhCCCCCcCCEEEeCCeEEEEEEeeecCCCCCCCCCCcCCCCEEEEEEEEEecHHHHHHHHhccCCcCCC
Confidence 4567899999999999999999988899999984 33468899998889999999999999999999884 2 67
Q ss_pred CCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhh
Q 026270 99 SANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGA 178 (241)
Q Consensus 99 ~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~ 178 (241)
+|+|+ ++++|++|| .+++++|+|+|||++||.+++++++||||+|+|||||+...++.++||||+++|...
T Consensus 98 sD~Ev--il~ly~~~G-------~~~~~~L~G~FAf~i~D~~~~~l~laRD~~GikPLyy~~~~~~~~~faSE~kaL~~~ 168 (554)
T PRK09431 98 SDCEV--ILALYQEKG-------PDFLDDLDGMFAFALYDSEKDAYLIARDPIGIIPLYYGYDEHGNLYFASEMKALVPV 168 (554)
T ss_pred CHHHH--HHHHHHHHH-------HHHHHhCCCceEEEEEECCCCEEEEEeCCCCCcceEEEEeCCCeEEEecchHHHHHh
Confidence 77777 579999999 899999999999999999899999999999999999999844789999999999988
Q ss_pred cCCceEEeCCCeEEEEeCCcEEEEeCCCC
Q 026270 179 CGKSLASFPQGCFFSTAVGGLRSFENPKN 207 (241)
Q Consensus 179 ~~~~i~~~ppG~~~~~~~~~~~~y~~~~~ 207 (241)
|. .|+.|||||++.+++|.+++||.+++
T Consensus 169 ~~-~I~~lpPGh~l~~~~g~~~~y~~~~~ 196 (554)
T PRK09431 169 CK-TIKEFPPGHYYWSKDGEFVRYYQRDW 196 (554)
T ss_pred cC-CEEEECCCeEEEECCCcEEEecCCCc
Confidence 75 69999999999887667999999875
No 5
>PTZ00077 asparagine synthetase-like protein; Provisional
Probab=100.00 E-value=7.1e-40 Score=315.87 Aligned_cols=189 Identities=24% Similarity=0.403 Sum_probs=157.4
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEc-----CcEEEEEeeC---CCCCCCCceEee
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVG-----DNVTLAYTHQ---NESPLRQRSFAV 72 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~-----~~~~l~~~~~---~~~~~~QP~~~~ 72 (241)
||||+|---.... . ......+.+|+++|+|||||+++++.. +.++|||.|+ +...+.||+.+.
T Consensus 1 MCGI~gi~~~~~~--------~-~~~~~~~~~m~~~l~HRGPD~~g~~~~~~~~~~~~~lgh~RLsIvd~~~g~QP~~~~ 71 (586)
T PTZ00077 1 MCGILAIFNSKGE--------R-HELRRKALELSKRLRHRGPDWSGIIVLENSPGTYNILAHERLAIVDLSDGKQPLLDD 71 (586)
T ss_pred CceEEEEEecCCc--------h-hhHHHHHHHHHHHHhCCCCCcCCEEEeccCCCCcEEEEeccceecCCCCCCCCcCCC
Confidence 9999994210000 0 112355778999999999999999874 4679999984 334688999988
Q ss_pred CCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCCCcHH-HHhccccccceEEEEEcCCCEEE
Q 026270 73 KDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAPYPPN-HVVGHLSGYFAFIVYDKSTSTLF 145 (241)
Q Consensus 73 ~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~~~i~-~~l~~L~G~fa~vi~d~~~~~l~ 145 (241)
++++++++||||||+.+|+++| |+ +.+|+|+ ++++|++|| . +++++|+|+|||++||..+++++
T Consensus 72 d~~~~lv~NGEIYN~~eLr~~L~~~g~~f~t~sD~Ev--il~ly~~~G-------~~~~l~~L~G~FAf~i~D~~~~~l~ 142 (586)
T PTZ00077 72 DETVALMQNGEIYNHWEIRPELEKEGYKFSSNSDCEI--IGHLYKEYG-------PKDFWNHLDGMFATVIYDMKTNTFF 142 (586)
T ss_pred CCCEEEEEEEEEcCHHHHHHHHHhcCCcCCCCCHHHH--HHHHHHHhC-------HHHHHHhcCCCEEEEEEECCCCEEE
Confidence 8899999999999999999998 34 6777777 579999998 6 89999999999999999899999
Q ss_pred EEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeC--CcEEEEeCCCCC
Q 026270 146 VASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAV--GGLRSFENPKNK 208 (241)
Q Consensus 146 ~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~--~~~~~y~~~~~~ 208 (241)
+||||+|+|||||+...++.++||||+++|...+. .|+.|||||++.++. ..+++||.|.+.
T Consensus 143 ~aRD~~GikPLyy~~~~~g~~~faSE~kaL~~~~~-~I~~lpPGh~l~~~~~~~~~~~y~~~~~~ 206 (586)
T PTZ00077 143 AARDHIGIIPLYIGYAKDGSIWFSSELKALHDQCV-EVKQFPPGHYYDQTKEKGEFVRYYNPNWH 206 (586)
T ss_pred EEECCCCCcCeEEEEecCCeEEEEecHHHHHHhcC-CEEEeCCCcEEEecCCcceeEEecCCccc
Confidence 99999999999999854578999999999998865 699999999998865 358899998764
No 6
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-38 Score=304.67 Aligned_cols=189 Identities=25% Similarity=0.388 Sum_probs=163.0
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEcCcEEEEEeeC---CCCCCCCceEeeCCcEE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQ---NESPLRQRSFAVKDEIF 77 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~~~~~l~~~~~---~~~~~~QP~~~~~~~~~ 77 (241)
||||+|.=. .+ .+ . . ....+.+|.+.|+|||||+.+++...++.+||.|+ +...+.||+...+++++
T Consensus 1 MCGI~g~~~--~~-~~-----~-~-~~~~~~~m~~~l~hRGPD~~g~~~~~~~~~gh~rL~i~d~~~g~QP~~~~~~~~~ 70 (542)
T COG0367 1 MCGIAGILN--FK-NL-----I-D-AKSIIEEMTKLLRHRGPDDSGVWISLNALLGHRRLSIVDLSGGRQPMIKEGGKYA 70 (542)
T ss_pred CCceeeeec--cc-cc-----c-c-chHHHHHHHHHhhccCCCccccEecCCceeeeeEEEEeccccCCCCcccCCCcEE
Confidence 999999422 21 11 0 1 26788999999999999999999988899999983 33457899988677799
Q ss_pred EEEeeEEcchhhHHHHhC---C---CCCCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCC
Q 026270 78 CLFEGALDNLGSLRQQYG---L---AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQF 151 (241)
Q Consensus 78 lv~nG~I~N~~~L~~~lg---~---~~~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~ 151 (241)
++|||||||+.+||++|. + +.+|+|++ +++|++|| .+++++|+|+|||++||..+++|+++|||+
T Consensus 71 l~~NGEIYN~~elr~~l~~~g~~f~t~sDtEvi--l~~y~~~g-------~~~~~~l~G~fAfai~d~~~~~l~laRD~~ 141 (542)
T COG0367 71 IVYNGEIYNVEELRKELREAGYEFRTYSDTEVI--LTLYEEWG-------EDCVEHLNGMFAFAIYDETRQKLFLARDPF 141 (542)
T ss_pred EEECCEeeeHHHHHHHHHhcCceeccccchHHH--HHHHHHHH-------HHHHHHhccceEEEEEECCCCEEEEEecCC
Confidence 999999999999999994 4 78888884 69999999 889999999999999999999999999999
Q ss_pred CCccEEEEEeCCCEEEEEeChhhhhhh-----cCCceEEeCCCeEEEEeCCc-EEEEeCCCCCCc
Q 026270 152 GKVPLYWGITADGHVAFADDADLLKGA-----CGKSLASFPQGCFFSTAVGG-LRSFENPKNKIT 210 (241)
Q Consensus 152 G~rPL~y~~~~~g~~~faSe~~aL~~~-----~~~~i~~~ppG~~~~~~~~~-~~~y~~~~~~~~ 210 (241)
|+|||||+..+ +.++||||.|+|..+ +. .|+++|||+++.++.++ +.+||.+.+...
T Consensus 142 GikPLyy~~~~-~~l~faSE~Kal~~~~~~~~~~-~i~~l~pg~~l~~~~~~~~~~y~~~~~~~~ 204 (542)
T COG0367 142 GVKPLYYTSKN-ENLAFASEIKALLAHPVVRFLR-DIKELPPGHLLEFTDGGLIRRYWRLSEKTS 204 (542)
T ss_pred CccccEEEecC-CceEEEechhhhhhCCcccccC-CeEEcCCCcEEEEcCCCceeeeeccccccc
Confidence 99999999984 679999999999998 44 69999999999998777 999999887643
No 7
>PRK07631 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=1e-37 Score=293.30 Aligned_cols=206 Identities=17% Similarity=0.163 Sum_probs=163.4
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEE---------------------------cCcE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQV---------------------------GDNV 53 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~ 53 (241)
||||||-- ..+ ......-.++.+|.|||||+.|+.. .+..
T Consensus 11 mCGI~Gi~--~~~-----------~~~~~~~~gL~~LqHRG~dsaGia~~~~~~~~~~k~~Glv~~vf~~~~l~~l~G~~ 77 (475)
T PRK07631 11 ECGVFGIW--GHE-----------EAAQITYYGLHSLQHRGQEGAGIVVTDGGKLSAHKGLGLVTEVFQNGELDALKGKA 77 (475)
T ss_pred CCcEEEEE--CCc-----------hhHHHHHHHHHHhcCCCcccCeEEEEcCCEEEEEEcccccchhhchhhhhccCCCE
Confidence 99999942 111 0234556789999999999998653 1346
Q ss_pred EEEEeeC---C--CCCCCCceEe--eCCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC-C
Q 026270 54 TLAYTHQ---N--ESPLRQRSFA--VKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP-Y 119 (241)
Q Consensus 54 ~l~~~~~---~--~~~~~QP~~~--~~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~-~ 119 (241)
+|||+|- + ...+.||++. .+++++++|||+|+|+++||++| |+ +.+|+|+ ++++|.+++.... +
T Consensus 78 gIGH~RysT~G~~~~~n~QP~~~~~~~g~ialvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEV--i~~Li~~~~~~~~~e 155 (475)
T PRK07631 78 AIGHVRYATAGGGGYENVQPLLFRSQTGSLALAHNGNLVNATQLKLQLENQGSIFQTTSDTEV--LAHLIKRSGAPTLKE 155 (475)
T ss_pred EEEEeeccccCCCCcCCcCCeEeEcCCCCEEEEEEEEEECHHHHHHHHHhCCCcCCCCCHHHH--HHHHHHHHcCCCHHH
Confidence 7899982 1 2367899963 46789999999999999999998 44 6777887 4689998763221 4
Q ss_pred cHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcE
Q 026270 120 PPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGL 199 (241)
Q Consensus 120 ~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~ 199 (241)
++.+++++|+|+|||++++. ++++++|||+|+|||||+.. ++.++||||.+||...+.+.+++|+|||+++++++++
T Consensus 156 ai~~~~~~l~G~yalvi~~~--~~l~aaRDp~GirPL~~G~~-~~~~~~ASE~~Al~~~g~~~ir~v~PGeiv~i~~~g~ 232 (475)
T PRK07631 156 QIKNALSMLKGAYAFLLMTE--TELYVALDPNGLRPLSIGRL-GDAYVVASETCAFDVIGATYEREVEPGELLIINDEGM 232 (475)
T ss_pred HHHHHHHhCCCCceeeEEeC--CEEEEEECCCCCCCEEEEEe-CCEEEEEeChHHHhhcCcceEEEcCCCeEEEEECCcE
Confidence 56789999999999999995 68999999999999999998 4679999999999988877899999999999988777
Q ss_pred EEEeC-CCCC-------CccCCCCcceeeCcee
Q 026270 200 RSFEN-PKNK-------ITAVPAAEEEIWGATF 224 (241)
Q Consensus 200 ~~y~~-~~~~-------~~~~~r~ds~i~g~~~ 224 (241)
+.+.. +..+ +.||+||||.|+|.+=
T Consensus 233 ~~~~~~~~~~~~~C~fE~iYfarpdS~~~g~~v 265 (475)
T PRK07631 233 RSERFAPNQNRSICSMEYIYFARPDSNVDGINV 265 (475)
T ss_pred EEEecCCCCCcccceEEEEEeecCCcccCCeEH
Confidence 76543 2222 2299999999999863
No 8
>PRK08525 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=2e-37 Score=290.49 Aligned_cols=207 Identities=15% Similarity=0.191 Sum_probs=162.2
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEc---------------------------CcE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVG---------------------------DNV 53 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~---------------------------~~~ 53 (241)
||||||-- ... .....+..|+.+|.|||||+.|+... +..
T Consensus 1 MCGI~G~~--~~~-----------~~~~~~~~~L~~LqhRG~DsaGia~~~~~~~~~~k~~G~v~~~f~~~~~~~~~g~~ 67 (445)
T PRK08525 1 MCAVVGVI--NSK-----------NAAKLAYYALFAMQHRGQEASGISVSNGKKIKTIKGRGLVTQVFNEDNLKTLKGEI 67 (445)
T ss_pred CceEEEEE--cCc-----------cHHHHHHHHHHHhhCcCcccceEEEEeCCEEEEEEcCcchhhccchhhhhccCCcE
Confidence 99999942 110 02455668999999999999997652 246
Q ss_pred EEEEeeC---C--CCCCCCceEe--eCCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC-C
Q 026270 54 TLAYTHQ---N--ESPLRQRSFA--VKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP-Y 119 (241)
Q Consensus 54 ~l~~~~~---~--~~~~~QP~~~--~~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~-~ 119 (241)
+|||+|. + ...+.||+.+ .+++++++|||+|||+.+|+++| |+ +.+|+|+ ++++|.+++.... +
T Consensus 68 ~iGH~R~at~g~~~~~naqP~~~~~~~g~~~lvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEv--i~~l~~~~~~~~~~e 145 (445)
T PRK08525 68 AIGHNRYSTAGNDSILDAQPVFARYDLGEIAIVHNGNLVNKKEVRSRLIQDGAIFQTNMDTEN--LIHLIARSKKESLKD 145 (445)
T ss_pred EEeecccccCCCCCCCCCCCeEeecCCCCEEEEEEEEEECHHHHHHHHHhcCCcCCCCCHHHH--HHHHHHHHcCCCHHH
Confidence 8999992 1 2267999987 56889999999999999999998 44 6778887 4688987752211 4
Q ss_pred cHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEe--CC
Q 026270 120 PPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTA--VG 197 (241)
Q Consensus 120 ~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~--~~ 197 (241)
++.+++++|+|+|||++++. ++|+++||++|+|||||+...++.++||||.+||.....+.+++++||++++++ ++
T Consensus 146 a~~~~~~~L~G~fa~vi~~~--~~l~~~RD~~GirPL~~g~~~~~~~~~ASE~~al~~~g~~~~~~~~pGe~v~i~~~~~ 223 (445)
T PRK08525 146 RIIEALKKIIGAYCLVLLSR--SKMFAIRDPHGVRPLSLGRLKDGGYIVASETCAFDLIGAEFIRDVKPGEMLIFEQGND 223 (445)
T ss_pred HHHHHHHhcCCceEEEEEeC--CEEEEEECCCCCCCeEEEEecCCEEEEEECHHHhhccCCcEEEEeCCCeEEEEEcCCC
Confidence 56789999999999999984 789999999999999999863467999999999988777778999999999987 34
Q ss_pred cEEEE--eCCCCC-----CccCCCCcceeeCcee
Q 026270 198 GLRSF--ENPKNK-----ITAVPAAEEEIWGATF 224 (241)
Q Consensus 198 ~~~~y--~~~~~~-----~~~~~r~ds~i~g~~~ 224 (241)
+++.+ +....+ +.|++||||.|+|.+=
T Consensus 224 ~~~~~~~~~~~~~~c~fe~iY~~rpds~~~g~~v 257 (445)
T PRK08525 224 EFESIQLFEPTPRICAFEYIYFARPDSIVFGKNV 257 (445)
T ss_pred ceEEEEecCCCCccceeEeeeecCCCceECCEEH
Confidence 55553 333222 3399999999999863
No 9
>TIGR03104 trio_amidotrans asparagine synthase family amidotransferase. Members of this protein family are closely related to several isoforms of asparagine synthetase (glutamine amidotransferase) and typically have been given this name in genome annotation to date. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and a member of the GNAT family of acetyltransferases.
Probab=100.00 E-value=3.8e-37 Score=297.88 Aligned_cols=187 Identities=22% Similarity=0.381 Sum_probs=155.6
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEcCcEEEEEeeCC---C-CCCCCceEeeCCcE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQN---E-SPLRQRSFAVKDEI 76 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~~~~~l~~~~~~---~-~~~~QP~~~~~~~~ 76 (241)
||||.|-- ..+ .. ......+..|++.|+|||||+.+++..++++|||+|.. . ..+.||+.+.++++
T Consensus 1 McGI~G~~--~~~------~~--~~~~~~~~~m~~~l~hRGPD~~g~~~~~~~~lgh~rl~i~~~~~~~~QP~~~~~~~~ 70 (589)
T TIGR03104 1 MCGICGEI--RFD------GQ--APDVAAVVRMLAVLAPRGPDAGGVHAQGPVALGHRRLKIIDLSEASQQPMVDAELGL 70 (589)
T ss_pred CcEEEEEE--ecC------CC--cchHHHHHHHHHhhcCCCCCcCCcEecCCEEEEEEeeEecCCCcCCCCCeECCCCCE
Confidence 99999942 111 00 01246688999999999999999999888999999832 2 36789999888899
Q ss_pred EEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcC
Q 026270 77 FCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQ 150 (241)
Q Consensus 77 ~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~ 150 (241)
+++|||+|||+.+|+++| |+ +.+|+|+ ++++|++|| .+++++|+|+|||++||..+++++++|||
T Consensus 71 ~~v~nGeiyN~~eL~~~l~~~g~~f~~~sD~Ev--il~~y~~~G-------~~~~~~l~G~fa~~i~d~~~~~l~laRD~ 141 (589)
T TIGR03104 71 ALVFNGCIYNYRELRAELEALGYRFFSDGDTEV--ILKAYHAWG-------RDCVSRFNGMFAFAIWERDSGRLLLARDR 141 (589)
T ss_pred EEEECCEecCHHHHHHHHHhcCCcccCCCHHHH--HHHHHHHHH-------HHHHHHhhcceEEEEEeCCCCEEEEEecC
Confidence 999999999999999998 44 6677777 579999999 89999999999999999999999999999
Q ss_pred CCCccEEEEEeCCCEEEEEeChhhhhhhc---------------------------CCceEEeCCCeEEEEeC-Cc--EE
Q 026270 151 FGKVPLYWGITADGHVAFADDADLLKGAC---------------------------GKSLASFPQGCFFSTAV-GG--LR 200 (241)
Q Consensus 151 ~G~rPL~y~~~~~g~~~faSe~~aL~~~~---------------------------~~~i~~~ppG~~~~~~~-~~--~~ 200 (241)
+|+|||||+.. ++.++||||+++|...+ .+.|+.|||||+++++. ++ .+
T Consensus 142 ~G~kPLyy~~~-~~~~~faSe~kaLl~~~~~~~~~d~~~l~~~l~~~~~~~~~~T~~~gI~~l~pG~~l~i~~~~~~~~~ 220 (589)
T TIGR03104 142 LGIKPLYYAED-AGRLRFASSLPALLAAGGVDTDIDPVALHHYLTFHAVVPAPHTILKGVRKLPPATWMTVEPDGSRTQR 220 (589)
T ss_pred CCCCCeEEEEe-CCEEEEEeCHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCCCchhhCceeeCCCcEEEEECCCCeEEE
Confidence 99999999998 57899999999987532 14689999999998863 43 66
Q ss_pred EEeCCCC
Q 026270 201 SFENPKN 207 (241)
Q Consensus 201 ~y~~~~~ 207 (241)
+||.+..
T Consensus 221 ~yw~~~~ 227 (589)
T TIGR03104 221 SYWSLDA 227 (589)
T ss_pred eeccCCC
Confidence 8998753
No 10
>PRK07272 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=1.1e-36 Score=286.84 Aligned_cols=209 Identities=14% Similarity=0.156 Sum_probs=165.2
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEc----------------------------Cc
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVG----------------------------DN 52 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~----------------------------~~ 52 (241)
||||||-- ..+ .....+-.++.+|.|||+|+.|+... ++
T Consensus 11 mCGI~Gi~--~~~-----------~~~~~~~~gL~~LqHRGqdsaGIa~~d~~~i~~~K~~Glv~~vf~~~~~l~~l~G~ 77 (484)
T PRK07272 11 ECGVFGIW--GHP-----------DAAQLTYFGLHSLQHRGQEGAGIVSNDNGKLKGHRDLGLLSEVFKDPADLDKLTGQ 77 (484)
T ss_pred cCeEEEEE--CCc-----------cHHHHHHHHHHHhcccCCccceEEEEeCCeeEEEecCCcccchhcchhhHhcCCCc
Confidence 99999942 111 12445667899999999999986542 23
Q ss_pred EEEEEeeC---C--CCCCCCceEe--eCCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC-
Q 026270 53 VTLAYTHQ---N--ESPLRQRSFA--VKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP- 118 (241)
Q Consensus 53 ~~l~~~~~---~--~~~~~QP~~~--~~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~- 118 (241)
.+|||+|- + ...+.||+.. .+++++++|||+|+|+.+||++| |+ +.+|||+ +++++.+++....
T Consensus 78 ~~IGH~RysT~G~~~~~naqP~~~~~~~g~ialvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEV--I~~Li~~~~~~~~~ 155 (484)
T PRK07272 78 AAIGHVRYATAGSASIENIQPFLFHFHDMQFGLAHNGNLTNAVSLRKELEKQGAIFHSSSDTEI--LMHLIRRSHNPTFM 155 (484)
T ss_pred EEEEEeeccccCCCCcCCCCCEEeecCCCCEEEEEEEEEeCHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHHHcCCCHH
Confidence 68999992 1 2367999986 46789999999999999999998 44 6778887 4688887642111
Q ss_pred CcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCc
Q 026270 119 YPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGG 198 (241)
Q Consensus 119 ~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~ 198 (241)
+++.+++++|+|+|||++++. ++|+++|||+|+||||||..+++.++||||.+||...+.+.+++++||+++++++++
T Consensus 156 eai~~~~~~l~G~ya~~i~~~--~~l~a~RDp~GirPL~~G~~~~~~~~~ASE~~Al~~ig~~~ir~l~PGEiv~i~~~g 233 (484)
T PRK07272 156 GKLKEALNTVKGGFAYLLLTE--DKLIAALDPNGFRPLSIGKMKNGAYVVASETCAFDVVGAEWVRDVQPGEIVIIDDEG 233 (484)
T ss_pred HHHHHHHHHccCceeEEEEEC--CEEEEEECCCCCCcEEEEEecCCEEEEEECHHHHhccCCceEEEcCCCeEEEEECCc
Confidence 467889999999999999985 789999999999999999864457999999999988887789999999999998777
Q ss_pred EEEEe--CCCCC------CccCCCCcceeeCceeEE
Q 026270 199 LRSFE--NPKNK------ITAVPAAEEEIWGATFKL 226 (241)
Q Consensus 199 ~~~y~--~~~~~------~~~~~r~ds~i~g~~~~~ 226 (241)
++.++ .+... ..||+||||.|.|..+..
T Consensus 234 ~~~~~~~~~~~~~~C~FE~vYfarpds~i~g~~v~~ 269 (484)
T PRK07272 234 IQYDSYTTDTQLAICSMEYIYFARPDSTIHGVNVHT 269 (484)
T ss_pred eEEEEecCCccccccchhhhhhcCCccccCCEEHHH
Confidence 66543 33221 229999999999988754
No 11
>PRK06781 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=3.2e-36 Score=283.35 Aligned_cols=207 Identities=15% Similarity=0.168 Sum_probs=163.2
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEE---------------------------cCcE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQV---------------------------GDNV 53 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~ 53 (241)
||||||-- ..+ ......-.++.+|.|||||+.|+.. .++.
T Consensus 11 mCGI~Gi~--~~~-----------~~~~~~~~gL~~LqhRG~dsaGia~~d~~~~~~~k~~GlV~~vf~~~~l~~l~g~~ 77 (471)
T PRK06781 11 ECGVFGIW--GHE-----------NAAQVSYYGLHSLQHRGQEGAGIVVNNGEKIVGHKGLGLISEVFSRGELEGLNGKS 77 (471)
T ss_pred cCeEEEEE--cCc-----------cHHHHHHHHHHHhhCcCcCcceEEEEeCCEEEEEecCcchhhhcchhhHhcCCCCE
Confidence 99999932 111 0234556799999999999998753 1235
Q ss_pred EEEEeeC---C--CCCCCCceEe--eCCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC-C
Q 026270 54 TLAYTHQ---N--ESPLRQRSFA--VKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP-Y 119 (241)
Q Consensus 54 ~l~~~~~---~--~~~~~QP~~~--~~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~-~ 119 (241)
+|||+|- + ...+.||+.. .+++++++|||+|+|+++|+++| |+ +.+|||+ +++++.+++.... +
T Consensus 78 ~IGHvRyaT~G~~~~~naqP~~~~~~~g~~alvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEv--I~~Li~~~~~~~~~e 155 (471)
T PRK06781 78 AIGHVRYATAGGSEVANVQPLLFRFSDHSMALAHNGNLINAKMLRRELEAEGSIFQTSSDTEV--LLHLIKRSTKDSLIE 155 (471)
T ss_pred EEEEeEcccCCCCCcCCCCCeEEecCCCCEEEEEEEEEcCHHHHHHHHHhCCCcCCCCCHHHH--HHHHHHHHcCCCHHH
Confidence 7899992 1 2367899974 35789999999999999999998 43 6777787 4688987753222 5
Q ss_pred cHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcE
Q 026270 120 PPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGL 199 (241)
Q Consensus 120 ~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~ 199 (241)
++.+++++|+|+|||++++. ++++++||++|+|||||+.. ++.++||||.+||.....+.+++|+||++++++++++
T Consensus 156 ai~~~~~~l~G~ya~vi~~~--~~l~aaRD~~GirPL~~g~~-~~~~~~ASE~~Al~~~g~~~ir~v~pGeiv~i~~~g~ 232 (471)
T PRK06781 156 SVKEALNKVKGAFAYLLLTG--NEMIVALDPNGFRPLSIGKM-GDAYVVASETCAFDVVGATYIRDVEPGELLIINDEGI 232 (471)
T ss_pred HHHHHHHhCCCcEEEEEEEC--CEEEEEECCCCCCCeEEEEE-CCEEEEEECchHhhhcCCcEEEEeCCCEEEEEECCce
Confidence 67889999999999999994 78999999999999999998 4679999999999988777899999999999987777
Q ss_pred EEEeCCCC-C-------CccCCCCcceeeCceeE
Q 026270 200 RSFENPKN-K-------ITAVPAAEEEIWGATFK 225 (241)
Q Consensus 200 ~~y~~~~~-~-------~~~~~r~ds~i~g~~~~ 225 (241)
+.+..+.. + +.||+||||.|+|.+=+
T Consensus 233 ~~~~~~~~~~~~~C~fE~vYfarpds~~~g~~vy 266 (471)
T PRK06781 233 HVDRFTNEVDHAICSMEYIYFARPDSNIAGINVH 266 (471)
T ss_pred EEEecCcCcccccceEEEEEecCCCceeCCEEHH
Confidence 66543321 2 22999999999998643
No 12
>cd00712 AsnB Glutamine amidotransferases class-II (GATase) asparagine synthase_B type. Asparagine synthetase B catalyses the ATP-dependent conversion of aspartate to asparagine. This enzyme is a homodimer, with each monomer composed of a glutaminase domain and a synthetase domain. The N-terminal glutaminase domain hydrolyzes glutamine to glutamic acid and ammonia.
Probab=100.00 E-value=5.7e-36 Score=256.77 Aligned_cols=168 Identities=26% Similarity=0.496 Sum_probs=146.5
Q ss_pred cchHHHHHHHhHcCCCCCcceEEcCcEEEEEeeCC---CCCCCCceEeeCCcEEEEEeeEEcchhhHHHHhC---C---C
Q 026270 27 KTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQN---ESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYG---L---A 97 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~~~~~l~~~~~~---~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~lg---~---~ 97 (241)
...+..|+..|+|||||+.+++..++.+|+|+|.. ...+.||+...++++++++||+|||+.+|+++|+ . +
T Consensus 16 ~~~~~~~~~~l~hRGpd~~~~~~~~~~~lgh~rl~~~~~~~~~qP~~~~~~~~~~~~nG~i~N~~~L~~~l~~~~~~~~~ 95 (220)
T cd00712 16 RATLERMLDALAHRGPDGSGIWIDEGVALGHRRLSIIDLSGGAQPMVSEDGRLVLVFNGEIYNYRELRAELEALGHRFRT 95 (220)
T ss_pred HHHHHHHHHHHhccCCCCCCEEEECCEEEEEEeeeecCcccCCCCeEeCCCCEEEEEEEEEeCHHHHHHHHHhcCCcCCC
Confidence 56788999999999999999999888999999832 2268899998888999999999999999999883 2 5
Q ss_pred CCCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhh
Q 026270 98 KSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKG 177 (241)
Q Consensus 98 ~~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~ 177 (241)
.+|+|+ ++++|++|| .++++.|+|+|||++||.++++++++|||+|.|||||+.. ++.++||||.++|..
T Consensus 96 ~sD~e~--l~~~~~~~g-------~~~~~~l~G~fa~vi~d~~~~~l~~~rD~~G~~pLy~~~~-~~~~~~aSe~~~l~~ 165 (220)
T cd00712 96 HSDTEV--ILHLYEEWG-------EDCLERLNGMFAFALWDKRKRRLFLARDRFGIKPLYYGRD-GGGLAFASELKALLA 165 (220)
T ss_pred CChHHH--HHHHHHHHh-------HHHHHHhhheEEEEEEECCCCEEEEEECCCCCEeeEEEEE-CCEEEEEcchHHHHh
Confidence 566666 579999998 8999999999999999998899999999999999999998 478999999999987
Q ss_pred hcC--------------------------CceEEeCCCeEEEEeCCc--EEEEeC
Q 026270 178 ACG--------------------------KSLASFPQGCFFSTAVGG--LRSFEN 204 (241)
Q Consensus 178 ~~~--------------------------~~i~~~ppG~~~~~~~~~--~~~y~~ 204 (241)
.+. +.|+.|||||++.++.++ .++||+
T Consensus 166 ~~~~~~~~d~~~l~~~l~~~~~~~~~T~~~~V~~l~pG~~l~~~~~~~~~~~yw~ 220 (220)
T cd00712 166 LPGVPRELDEAALAEYLAFQYVPAPRTIFKGIRKLPPGHYLTVDPGGVEIRRYWD 220 (220)
T ss_pred cCCCCCCcCHHHHHHHHhcCCCCCCCchhcCceEECCceEEEEECCCeEEeeeCC
Confidence 533 479999999999998764 667874
No 13
>PRK07349 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=3.5e-36 Score=284.30 Aligned_cols=208 Identities=18% Similarity=0.208 Sum_probs=160.9
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEE---------------------------cCcE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQV---------------------------GDNV 53 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~ 53 (241)
||||||-- ..+. .....+-.++.+|.|||+|+.|+.. .++.
T Consensus 33 mCGI~Gi~--~~~~----------~~~~~~~~gL~~LqHRGqdsaGIa~~~~~~~~~~K~~Glv~~vf~~~~l~~l~G~i 100 (500)
T PRK07349 33 ACGVFGVY--APGE----------EVAKLTYFGLYALQHRGQESAGIATFEGDKVHLHKDMGLVSQVFDEDILEELPGDL 100 (500)
T ss_pred CCeEEEEE--CCCc----------CHHHHHHHHHHHhcccCcCcceEEEEeCCEEEEEecCcchhhhcchhhhhcCCCCE
Confidence 99999942 1110 0234555799999999999999754 1236
Q ss_pred EEEEeeC---C--CCCCCCceEee--CCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC--
Q 026270 54 TLAYTHQ---N--ESPLRQRSFAV--KDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP-- 118 (241)
Q Consensus 54 ~l~~~~~---~--~~~~~QP~~~~--~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~-- 118 (241)
+|||+|- + ...+.||+... .++++++|||+|+|+.+||++| |+ +.+|+|++ +++|.+....+.
T Consensus 101 ~IGHvRysT~G~~~~~naQP~~~~~~~g~ialvhNG~I~N~~eLr~~L~~~G~~f~s~sDtEVi--~~li~~~~~~~~~~ 178 (500)
T PRK07349 101 AVGHTRYSTTGSSRKANAQPAVLETRLGPLALAHNGNLVNTVELREELLARGCELTTTTDSEMI--AFAIAQAVDAGKDW 178 (500)
T ss_pred EEEEeecccCCCCCccCCCCeEeecCCCCEEEEEEEEEeCHHHHHHHHHhCCCcCCCCCHHHHH--HHHHHHHHhcCCCH
Confidence 8999982 1 13679999864 4789999999999999999998 43 67788874 588876322221
Q ss_pred -CcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeC---CCEEEEEeChhhhhhhcCCceEEeCCCeEEEE
Q 026270 119 -YPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITA---DGHVAFADDADLLKGACGKSLASFPQGCFFST 194 (241)
Q Consensus 119 -~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~---~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~ 194 (241)
+++.+++++|+|+|||++++. ++|+++|||+|+|||||+... ++.++||||.+||.....+.+++++||+++++
T Consensus 179 ~eai~~~~~~l~G~ya~vi~~~--~~l~aaRDp~GiRPL~~G~~~~~~~~~~~~ASE~~Al~~lg~~~ir~v~PGeiv~i 256 (500)
T PRK07349 179 LEAAISAFQRCQGAFSLVIGTP--EGLMGVRDPNGIRPLVIGTLGEGGPGRYVLASETCALDIIGAEYLRDVEPGELVWI 256 (500)
T ss_pred HHHHHHHHHHhhhhEEEEEEeC--CEEEEEECCCCCCCeEEEecccCCCCeEEEEeccchhhhcCCceEEEeCCCeEEEE
Confidence 456789999999999999874 789999999999999999862 24799999999998887778999999999999
Q ss_pred eCCcEEEEeC-C-CC-C-----CccCCCCcceeeCcee
Q 026270 195 AVGGLRSFEN-P-KN-K-----ITAVPAAEEEIWGATF 224 (241)
Q Consensus 195 ~~~~~~~y~~-~-~~-~-----~~~~~r~ds~i~g~~~ 224 (241)
++++++.+.. + .. + +.||+||||.|+|.+=
T Consensus 257 ~~~g~~~~~~~~~~~~~~C~fE~vYfarpdS~~~g~~V 294 (500)
T PRK07349 257 TEGGLSSFHWAQEPQRKLCIFEMIYFARPDSRMHGESL 294 (500)
T ss_pred ECCceEEEecccCCCcceeEEEeeeccCCCCccCCeEH
Confidence 8777766543 2 11 2 2299999999999863
No 14
>PRK06388 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=3.6e-36 Score=283.05 Aligned_cols=205 Identities=14% Similarity=0.116 Sum_probs=161.5
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEc--------------------------CcEE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVG--------------------------DNVT 54 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~--------------------------~~~~ 54 (241)
||||||-. ..+ .....+-.++.+|.|||+|+.|+... ++.+
T Consensus 19 mCGI~G~~--~~~-----------~~~~~~~~gL~~LqhRGqdsaGIa~~d~~~i~~~K~~Glv~~vf~~~~~~l~G~~g 85 (474)
T PRK06388 19 DCAVVGFK--GGI-----------NAYSPIITALRTLQHRGQESAGMAVFDGRKIHLKKGMGLVTDVFNPATDPIKGIVG 85 (474)
T ss_pred CCeEEEEE--CCc-----------chHHHHHHHHHHhhCcCcCcceEEEEcCCEEEEEecCcchHHHhhhhhhcCCCcEE
Confidence 99999942 111 02456778999999999999997651 2368
Q ss_pred EEEee---CC--CCCCCCceEe--eCCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhh-cCCC-C
Q 026270 55 LAYTH---QN--ESPLRQRSFA--VKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALR-DRAP-Y 119 (241)
Q Consensus 55 l~~~~---~~--~~~~~QP~~~--~~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g-~~g~-~ 119 (241)
|||+| .+ ...+.||+.. ..++++++|||+|+|+.+||++| |+ +.+|+|++ +++|.+.- ..+. +
T Consensus 86 IGH~RyaT~G~~~~~naqP~~~~~~~g~ialvhNG~I~N~~eLr~~L~~~G~~F~s~sDtEVi--~~li~~~~~~~~~~e 163 (474)
T PRK06388 86 VGHTRYSTAGSKGVENAGPFVINSSLGYIGISHNGEIVNADELREEMKKEGYIFQSDSDTEVM--LAELSRNISKYGLKE 163 (474)
T ss_pred EeeeeeeecCCCCccCCCCeEeecCCCCEEEEECceECCHHHHHHHHHHCCCcccCCCHHHHH--HHHHHHHHhcCCHHH
Confidence 99998 12 2377899974 35789999999999999999998 44 77888874 57775421 1122 4
Q ss_pred cHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcE
Q 026270 120 PPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGL 199 (241)
Q Consensus 120 ~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~ 199 (241)
++.+++++|+|+|||++++. ++|+++|||+|+|||||+.. ++.++||||.+||.....+.+++|+||++++++++++
T Consensus 164 ai~~~~~~l~G~ya~vi~~~--~~l~a~RDp~GiRPL~~G~~-~~~~~~ASE~~Al~~~~~~~i~~l~PGeiv~i~~~g~ 240 (474)
T PRK06388 164 GFERSMERLRGAYACALMIN--DRLYAIRDPNGIRPLVLGKN-FDGYIIASESCAIDALSGTTIKNVEPGEVVEVFDNGY 240 (474)
T ss_pred HHHHHHHhccCceeEEEEEC--CEEEEEECCCCCCceEEEec-CCEEEEEEChHHHHhccCcEEEEeCCCEEEEEECCce
Confidence 56789999999999999974 79999999999999999998 4679999999999998887899999999999988787
Q ss_pred EEEeC-CCCC-------CccCCCCcceeeCce
Q 026270 200 RSFEN-PKNK-------ITAVPAAEEEIWGAT 223 (241)
Q Consensus 200 ~~y~~-~~~~-------~~~~~r~ds~i~g~~ 223 (241)
+++.. +..+ +.||+||||.|+|.+
T Consensus 241 ~~~~~~~~~~~~~C~fE~iYfarpds~~~g~~ 272 (474)
T PRK06388 241 KTIFKLDGDKVAHCMFEYVYFSRPDSIIDGIN 272 (474)
T ss_pred EEEEecCCCccccceEEEEeecCCccccCCcH
Confidence 55544 2221 229999999999975
No 15
>TIGR03108 eps_aminotran_1 exosortase 1 system-associated amidotransferase 1. The predicted protein-sorting transpeptidase that we call exosortase (see TIGR02602) has distinct subclasses that associated with different types of exopolysaccharide production loci. This model represents a distinct clade among a set of amidotransferases largely annotated (not necessarily accurately) as glutatime-hydrolyzing asparagine synthases. Members of this clade are essentially restricted to the characteristic exopolysaccharide (EPS) regions that contain the exosortase 1 genome (xrtA), in genomes that also have numbers of PEP-CTERM domain (TIGR02595) proteins.
Probab=100.00 E-value=3.6e-36 Score=293.21 Aligned_cols=189 Identities=23% Similarity=0.372 Sum_probs=155.8
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEcCcEEEEEeeC---CCCCCCCceEeeCCcEE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQ---NESPLRQRSFAVKDEIF 77 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~~~~~l~~~~~---~~~~~~QP~~~~~~~~~ 77 (241)
||||+|-- ..+ ...+.....+..|+++|.|||||+.+++..++++|||+|. +...+.||+.+.+++++
T Consensus 1 McGI~G~~--~~~-------~~~~~~~~~~~~m~~~l~hRGpD~~g~~~~~~~~lgh~rl~i~d~~~~~qP~~~~~~~~~ 71 (628)
T TIGR03108 1 MCGITGIF--DLT-------GQRPIDRDLLRRMNDAQAHRGPDGGGVHVEPGIGLGHRRLSIIDLSGGQQPLFNEDGSVV 71 (628)
T ss_pred CCEEEEEE--ECC-------CCccccHHHHHHHHHHhcCCCCCccCeEeeCCEEEEEEeeeecCCCCCCCCcCcCCCCEE
Confidence 99999942 111 0001124568899999999999999999988899999983 23467899998888999
Q ss_pred EEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCC
Q 026270 78 CLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQF 151 (241)
Q Consensus 78 lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~ 151 (241)
++|||+|||+.+|+++| |+ +.+|+|+ ++++|++|| .+++++|+|+|||++||..+++++++||++
T Consensus 72 lv~nGei~N~~eL~~~l~~~g~~~~~~sD~Ev--i~~~~~~~g-------~~~~~~l~G~fa~~~~d~~~~~l~~~rD~~ 142 (628)
T TIGR03108 72 VVFNGEIYNFQELVAELQALGHVFRTRSDTEV--IVHAWEEWG-------EACVERFRGMFAFALWDRNQETLFLARDRL 142 (628)
T ss_pred EEECCeECCHHHHHHHHHhcCCccCCCChHHH--HHHHHHHHH-------HHHHHHcCCCEEEEEEECCCCEEEEEECCC
Confidence 99999999999999987 44 6777777 579999999 899999999999999999999999999999
Q ss_pred CCccEEEEEeCCCEEEEEeChhhhhhhc--------------------------CCceEEeCCCeEEEEeCCc----EEE
Q 026270 152 GKVPLYWGITADGHVAFADDADLLKGAC--------------------------GKSLASFPQGCFFSTAVGG----LRS 201 (241)
Q Consensus 152 G~rPL~y~~~~~g~~~faSe~~aL~~~~--------------------------~~~i~~~ppG~~~~~~~~~----~~~ 201 (241)
|+|||||+...++.++||||+++|...+ .++|+.|||||++.++.++ .++
T Consensus 143 G~~PLyy~~~~~~~~~faSe~~al~~~~~~~~~~d~~~l~~~l~~~~~~~~~T~~~gI~~l~pG~~l~~~~~~~~~~~~~ 222 (628)
T TIGR03108 143 GIKPLYYALLADGWFIFGSELKALTAHPSLPRELDPLAVEDYFAYGYVPDPRTIFKGVKKLEPGHTLTLRRGAPPARPRC 222 (628)
T ss_pred CCcceEEEEeCCCEEEEEecHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCCchhcCcEEECCCeEEEEECCCcceeccc
Confidence 9999999975456899999999986542 1579999999998887442 467
Q ss_pred EeCCCC
Q 026270 202 FENPKN 207 (241)
Q Consensus 202 y~~~~~ 207 (241)
||.+..
T Consensus 223 yw~~~~ 228 (628)
T TIGR03108 223 YWDVSF 228 (628)
T ss_pred cccCCC
Confidence 888753
No 16
>PRK07847 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=1.3e-35 Score=281.08 Aligned_cols=207 Identities=19% Similarity=0.244 Sum_probs=161.4
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEc---------------------------CcE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVG---------------------------DNV 53 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~---------------------------~~~ 53 (241)
||||||-- ...+ ......-.++.+|.|||+|+.|+... ++.
T Consensus 23 mCGI~Gi~--~~~~----------~~~~~~~~gL~~LqHRGqdsaGIa~~d~~~i~~~K~~Glv~~vf~d~~l~~l~G~i 90 (510)
T PRK07847 23 ECGVFGVW--APGE----------EVAKLTYYGLYALQHRGQEAAGIAVSDGSQILVFKDLGLVSQVFDEQTLASLQGHV 90 (510)
T ss_pred cCeEEEEE--CCCc----------CHHHHHHHHHHHHhhhCcCcccEEEEeCCEEEEEecCccHHHhhchhhhhhcCCcE
Confidence 99999942 1110 01344557899999999999986541 235
Q ss_pred EEEEeeC---CC--CCCCCceEee---CCcEEEEEeeEEcchhhHHHHh---C-------C-CCCCchHHHHHHHHHHhh
Q 026270 54 TLAYTHQ---NE--SPLRQRSFAV---KDEIFCLFEGALDNLGSLRQQY---G-------L-AKSANEVILVIEAYKALR 114 (241)
Q Consensus 54 ~l~~~~~---~~--~~~~QP~~~~---~~~~~lv~nG~I~N~~~L~~~l---g-------~-~~~d~e~~lil~~~~~~g 114 (241)
+|||+|. +. ..+.||+... .++++++|||+|+|+++|+++| | . +.+|||+ +++++.+++
T Consensus 91 ~IGHvR~sT~G~~~~~naQP~~~~~~~~g~ialvHNG~I~N~~eLr~~L~~~G~~~~~~~f~s~sDSEV--I~~Li~~~~ 168 (510)
T PRK07847 91 AIGHCRYSTTGASTWENAQPTFRATAAGGGVALGHNGNLVNTAELAARARDRGLIRGRDPAGATTDTDL--VTALLAHGA 168 (510)
T ss_pred EEEeccCCcCCCCcccCCCCcCcccCCCCCEEEEEEEEEeCHHHHHHHHHhcCCccccCCCCCCCHHHH--HHHHHHHhc
Confidence 8999982 11 2578999753 6789999999999999999988 4 2 5777777 468888775
Q ss_pred cCCC--CcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEE
Q 026270 115 DRAP--YPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFF 192 (241)
Q Consensus 115 ~~g~--~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~ 192 (241)
+.+. +++.+++++|+|+|||+++|. ++|+++||++|+|||||+.. ++.++||||.+||.....+.|++||||+++
T Consensus 169 ~~~~~~eai~~~~~~l~G~yA~vi~d~--~~L~aaRDp~GirPL~~g~~-~~~~~vASE~~AL~~~g~~~ir~v~PGeiv 245 (510)
T PRK07847 169 ADSTLEQAALELLPTVRGAFCLVFMDE--HTLYAARDPQGVRPLVLGRL-ERGWVVASETAALDIVGASFVREIEPGELI 245 (510)
T ss_pred cCCCHHHHHHHHHHHhhhheEEEEEEC--CEEEEEECCCCCCCcEEEEE-CCeEEEEechHHHhccCCcEEEEECcCEEE
Confidence 3222 456789999999999999995 68999999999999999998 467999999999998766789999999999
Q ss_pred EEeCCcEEE--EeCCCCC-----CccCCCCcceeeCcee
Q 026270 193 STAVGGLRS--FENPKNK-----ITAVPAAEEEIWGATF 224 (241)
Q Consensus 193 ~~~~~~~~~--y~~~~~~-----~~~~~r~ds~i~g~~~ 224 (241)
+++.++++. |+.+..+ +.||+||||.|+|.+=
T Consensus 246 ~I~~~gv~~~~~~~~~~~~C~fE~vYfarpdS~~~g~~v 284 (510)
T PRK07847 246 AIDADGLRSTRFAEPTPKGCVFEYVYLARPDTTIAGRSV 284 (510)
T ss_pred EEECCceEEEeccCCCCCCCeEEEEEecCCcceeCCeEH
Confidence 998777554 4443322 2299999999999863
No 17
>PRK09123 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=1.2e-35 Score=280.05 Aligned_cols=206 Identities=17% Similarity=0.193 Sum_probs=161.5
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEc----------------------------Cc
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVG----------------------------DN 52 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~----------------------------~~ 52 (241)
||||||-- ... .....+-.++.+|.|||+|+.|+... ++
T Consensus 21 mCGI~Gi~--~~~-----------~~~~~~~~gL~~LqHRG~dsaGia~~~~~~~~~~k~~Glv~~vf~~~~~l~~l~G~ 87 (479)
T PRK09123 21 ECGVFGIL--GHP-----------DAAALTALGLHALQHRGQEAAGIVSFDGERFHSERRMGLVGDHFTDADVIARLPGN 87 (479)
T ss_pred cCeEEEEE--cCc-----------chHHHHHHHHHHhcCcCccCCEEEEEECCEEEEEecCcchhhhhhhhhhhhccCCC
Confidence 99999942 110 02445667999999999999987641 23
Q ss_pred EEEEEeeC---C--CCCCCCceEee--CCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC-
Q 026270 53 VTLAYTHQ---N--ESPLRQRSFAV--KDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP- 118 (241)
Q Consensus 53 ~~l~~~~~---~--~~~~~QP~~~~--~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~- 118 (241)
.+|||+|. + ...+.||+... +++++++|||+|+|+.+||++| |+ +.+|+|++ ++++.+++....
T Consensus 88 ~~IGH~R~sT~G~~~~~n~QP~~~~~~~g~~alvhNG~I~N~~eLr~~L~~~G~~f~s~sDSEvi--~~Li~~~~~~~~~ 165 (479)
T PRK09123 88 RAIGHVRYSTTGETILRNVQPLFAELEFGGLAIAHNGNLTNALTLRRELIRRGAIFQSTSDTEVI--LHLIARSRKASFL 165 (479)
T ss_pred EEEEEEecccCCCCCcCCCCCceeecCCCCEEEEEEEEEeCHHHHHHHHHhCCCcCCCCCHHHHH--HHHHHHHccCCHH
Confidence 58999992 2 23778999864 6789999999999999999998 43 67788874 688877642111
Q ss_pred CcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCc
Q 026270 119 YPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGG 198 (241)
Q Consensus 119 ~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~ 198 (241)
+++.+++++|+|+|||++|+. ++|+++||++|+|||||+.. ++.++||||.+||.....+.+++++||++++++.++
T Consensus 166 eai~~~~~~L~G~ya~vil~~--~~l~a~RD~~GirPL~~g~~-~~~~~~ASE~~Al~~~g~~~~r~v~pGeiv~i~~~g 242 (479)
T PRK09123 166 DRFIDALRQVEGAYSLVALTN--TKLIGARDPLGIRPLVLGEL-DGSPILASETCALDIIGAEFVRDVEPGELVVIDEDG 242 (479)
T ss_pred HHHHHHHHHhhcceeEEEEEC--CEEEEEECCCCCCceEEEEE-CCEEEEEECchHHhccCCceEEEECCCeEEEEeCCC
Confidence 356789999999999999985 69999999999999999998 568999999999987766789999999999997666
Q ss_pred -EEEEeCCC---CC-----CccCCCCcceeeCcee
Q 026270 199 -LRSFENPK---NK-----ITAVPAAEEEIWGATF 224 (241)
Q Consensus 199 -~~~y~~~~---~~-----~~~~~r~ds~i~g~~~ 224 (241)
++++.... .+ ..|++||||.|+|.+=
T Consensus 243 ~~~~~~~~~~~~~~~C~FE~VYfarPdS~~~g~~v 277 (479)
T PRK09123 243 SIESIKPFPPQPARFCIFEYVYFARPDSVVGGRSV 277 (479)
T ss_pred cEEEEEecCCCCCCCChhheEEecCCCceECCeEH
Confidence 76643222 12 2299999999999864
No 18
>PRK08341 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=2.5e-35 Score=275.44 Aligned_cols=201 Identities=18% Similarity=0.217 Sum_probs=158.6
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEE--------------------------cCcEE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQV--------------------------GDNVT 54 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~--------------------------~~~~~ 54 (241)
||||||-.- + . ....+-.++.+|.|||+|+.|+.. .++.+
T Consensus 4 ~CGI~G~~~---~----------~-~~~~l~~gL~~LqhRG~dsaGIa~~~~~~~~~K~~Glv~~vf~~~~~~~l~g~~~ 69 (442)
T PRK08341 4 KCGIFAAYS---E----------N-APKKAYYALIALQHRGQEGAGISVWRHRIRTVKGHGLVSEVFKGGSLSRLKSNLA 69 (442)
T ss_pred ccEEEEEEC---C----------C-cHHHHHHHHHHhhccCcccceEEEECCcEEEEecCCchhhhhcccccccCCCCEE
Confidence 999999431 1 0 245677899999999999999754 23578
Q ss_pred EEEee---CCCCCCCCceEee--CCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHH----HhhcCCCC
Q 026270 55 LAYTH---QNESPLRQRSFAV--KDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYK----ALRDRAPY 119 (241)
Q Consensus 55 l~~~~---~~~~~~~QP~~~~--~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~----~~g~~g~~ 119 (241)
|||+| .+...+.||+... +++++++|||+|+|+.+||++| |+ +.+|||++ ++++. ++++ -.+
T Consensus 70 IGH~R~sT~G~~~~~QP~~~~~~~g~ialvhNG~I~N~~eLr~~L~~~G~~F~s~sDtEVI--~~li~~~~~~~~~-~~~ 146 (442)
T PRK08341 70 IGHVRYSTSGSLSEVQPLEVECCGYKIAIAHNGTLTNFLPLRRKYESRGVKFRSSVDTELI--GISFLWHYSETGD-EFE 146 (442)
T ss_pred EEEeeccccCCCcCcCCEEeecCCCCEEEEEEEEEECHHHHHHHHHHcCCccCCCCHHHHH--HHHHHHHHHhcCC-HHH
Confidence 99999 2345789999864 4789999999999999999998 44 67888885 34443 3221 014
Q ss_pred cHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcE
Q 026270 120 PPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGL 199 (241)
Q Consensus 120 ~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~ 199 (241)
++.+++++|+|+|||++++. ++|+++||++|+|||||+.. + .++||||.+||...+. .+++++||++++++++++
T Consensus 147 ai~~~~~~l~G~yal~i~~~--~~l~a~RD~~GirPL~~G~~-~-~~~~ASE~~Al~~~~~-~v~~l~PGeiv~i~~~g~ 221 (442)
T PRK08341 147 AMREVFNEVKGAYSVAILFD--GKIIVARDPVGFRPLSYGEG-D-GHYFASEDSALRMFVN-EIRDVFPGEVFVVSEGEV 221 (442)
T ss_pred HHHHHHHhccCceEEEEEEC--CEEEEEEcCCCceEEEEEEC-C-EEEEEeCcHHHHhhCC-eEEEeCCCEEEEEECCce
Confidence 56789999999999999984 79999999999999999984 4 4999999999998875 799999999999988887
Q ss_pred EEEeCCCCC-------CccCCCCcceeeCce
Q 026270 200 RSFENPKNK-------ITAVPAAEEEIWGAT 223 (241)
Q Consensus 200 ~~y~~~~~~-------~~~~~r~ds~i~g~~ 223 (241)
+++.....+ +.|++||||.|.|.+
T Consensus 222 ~~~~~~~~~~~~C~fe~iYfarpds~~~g~~ 252 (442)
T PRK08341 222 ESKVLAREKHHHCVFEYIYFARPDSVIDGVS 252 (442)
T ss_pred EEEeeccCCCccceEEEEEecCCccccCCcC
Confidence 764432222 239999999999984
No 19
>PRK05793 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=4.3e-35 Score=276.23 Aligned_cols=209 Identities=15% Similarity=0.178 Sum_probs=164.0
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEE---------------------------cCcE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQV---------------------------GDNV 53 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~ 53 (241)
||||||-. ..+. . .....+-.++.+|.|||+|+.|+.. .++.
T Consensus 14 mCGI~Gi~--~~~~-~--------~~~~~~~~gL~~LqhRG~dsaGIa~~~~~~~~~~k~~G~v~~~f~~~~l~~l~g~~ 82 (469)
T PRK05793 14 ECGVFGVF--SKNN-I--------DVASLTYYGLYALQHRGQESAGIAVSDGEKIKVHKGMGLVSEVFSKEKLKGLKGNS 82 (469)
T ss_pred CCeEEEEE--cCCC-c--------cHHHHHHHHHHHHhhhCCCcceEEEEeCCEEEEEecccccccccchhhHhccCCcE
Confidence 99999943 1110 0 0133455689999999999998753 1346
Q ss_pred EEEEeeC---C--CCCCCCceEee--CCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC-C
Q 026270 54 TLAYTHQ---N--ESPLRQRSFAV--KDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP-Y 119 (241)
Q Consensus 54 ~l~~~~~---~--~~~~~QP~~~~--~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~-~ 119 (241)
+|||+|. + ...+.||+... +++++++|||+|+|+++|+++| |+ +.+|+|++ ++++.+++..+. +
T Consensus 83 ~iGHvR~sT~G~~~~~n~qPf~~~~~~g~~alvhNG~I~N~~eLr~~L~~~g~~f~s~sDSEvi--~~li~~~~~~~~~~ 160 (469)
T PRK05793 83 AIGHVRYSTTGASDLDNAQPLVANYKLGSIAIAHNGNLVNADVIRELLEDGGRIFQTSIDSEVI--LNLIARSAKKGLEK 160 (469)
T ss_pred EEEEeecccCCCCCCCCCCCeEeecCCCCEEEEEEEEEeCHHHHHHHHHhcCCcccCCCHHHHH--HHHHHHHccCCHHH
Confidence 7899982 1 23678999874 5789999999999999999988 43 67888874 688887753222 4
Q ss_pred cHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcE
Q 026270 120 PPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGL 199 (241)
Q Consensus 120 ~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~ 199 (241)
++.+++++|+|+||+++++. ++|+++||++|+|||||+.. ++.++||||.+||.....+.+++|+|||+++++.+++
T Consensus 161 ai~~~~~~l~G~ya~vi~~~--~~l~a~RD~~GirPL~~g~~-~~~~~vASE~~al~~~g~~~~r~v~pGeiv~i~~~g~ 237 (469)
T PRK05793 161 ALVDAIQAIKGSYALVILTE--DKLIGVRDPHGIRPLCLGKL-GDDYILSSESCALDTIGAEFIRDVEPGEIVIIDEDGI 237 (469)
T ss_pred HHHHHHHHhhhhceEEEEEC--CEEEEEECCCCCCCcEEEEE-CCEEEEEEChHHHhhcCcceEEEeCCCeEEEEECCce
Confidence 67889999999999999985 79999999999999999998 5679999999999988777899999999999988777
Q ss_pred EEEeCCC-CC-------CccCCCCcceeeCceeE
Q 026270 200 RSFENPK-NK-------ITAVPAAEEEIWGATFK 225 (241)
Q Consensus 200 ~~y~~~~-~~-------~~~~~r~ds~i~g~~~~ 225 (241)
+.+..+. .+ +.||+||||.|+|.+=+
T Consensus 238 ~~~~~~~~~~~~~C~fe~vYfarpds~~~g~~v~ 271 (469)
T PRK05793 238 KSIKFAEKTKCQTCAFEYIYFARPDSVIDGISVY 271 (469)
T ss_pred EEEecCcCccccccEEEEEEeccCCcccCCeEhh
Confidence 7655322 12 22999999999998643
No 20
>PLN02440 amidophosphoribosyltransferase
Probab=100.00 E-value=1.8e-34 Score=272.57 Aligned_cols=206 Identities=16% Similarity=0.153 Sum_probs=159.9
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEE---------------------------cCcE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQV---------------------------GDNV 53 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~ 53 (241)
||||||-- ..+ .....+-.|+.+|.|||||+.|+.. .++.
T Consensus 1 MCGI~Gi~--~~~-----------~~~~~~~~~L~~LqHRGqds~Gi~~~d~~~~~~~k~~Glv~~vf~~~~l~~l~g~~ 67 (479)
T PLN02440 1 ECGVVGIF--GDP-----------EASRLCYLGLHALQHRGQEGAGIVTVDGNRLQSITGNGLVSDVFDESKLDQLPGDI 67 (479)
T ss_pred CceEEEEE--CCc-----------cHHHHHHHHHHHHHhhCcccceEEEEcCCEEEEEecCCchhhhcchhhhhccCCcE
Confidence 99999942 111 0245677899999999999998754 3347
Q ss_pred EEEEeeC---C--CCCCCCceEee--CCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC-C
Q 026270 54 TLAYTHQ---N--ESPLRQRSFAV--KDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP-Y 119 (241)
Q Consensus 54 ~l~~~~~---~--~~~~~QP~~~~--~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~-~ 119 (241)
+|||+|. . ...+.||+... +++++++|||+|+|+++|+++| |. +.+|+|++ +++|.++..... +
T Consensus 68 ~IGHvRysT~G~~~~~n~QPf~~~~~~g~~~lahNG~I~N~~eLr~~L~~~g~~f~s~sDsEvi--~~li~~~~~~~~~~ 145 (479)
T PLN02440 68 AIGHVRYSTAGASSLKNVQPFVANYRFGSIGVAHNGNLVNYEELRAKLEENGSIFNTSSDTEVL--LHLIAISKARPFFS 145 (479)
T ss_pred EEEEEeccccCCCCccCCCCceeecCCCCEEEEEEEEEeCHHHHHHHHHhcCCcCCCCCHHHHH--HHHHHHhhhhhHHH
Confidence 8999982 1 24789999863 4679999999999999999988 33 67788874 688876531111 3
Q ss_pred cHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcE
Q 026270 120 PPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGL 199 (241)
Q Consensus 120 ~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~ 199 (241)
++.++++.|+|+||+++||. ++|+++|||+|+|||||+...++.++||||.+||.....+.+++++||++++++++++
T Consensus 146 a~~~~~~~l~G~fa~vi~~~--~~l~a~RD~~G~RPL~~g~~~~~~~~vASE~~al~~~g~~~ir~v~PGeiv~i~~~g~ 223 (479)
T PLN02440 146 RIVDACEKLKGAYSMVFLTE--DKLVAVRDPHGFRPLVMGRRSNGAVVFASETCALDLIGATYEREVNPGEVIVVDKDKG 223 (479)
T ss_pred HHHHHHHHhccceeeeEEEC--CEEEEEECCCCCCceEEEEeCCCEEEEEECchHHhccCCcEEEEeCCCeEEEEECCCc
Confidence 45789999999999999995 5799999999999999997645679999999999988777899999999999987763
Q ss_pred EEEe---CCCC------CCccCCCCcceeeCce
Q 026270 200 RSFE---NPKN------KITAVPAAEEEIWGAT 223 (241)
Q Consensus 200 ~~y~---~~~~------~~~~~~r~ds~i~g~~ 223 (241)
.+.. .+.. ++.|++||||.|.|..
T Consensus 224 ~~~~~~~~~~~~~~C~fe~vYf~~p~s~~~g~~ 256 (479)
T PLN02440 224 VSSQCLMPHPEPKPCIFEHIYFARPNSIVFGRS 256 (479)
T ss_pred EEEeeccCCCCcccceEEEEeecCCCccccCeE
Confidence 3322 2222 1239999999998864
No 21
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=100.00 E-value=2e-34 Score=272.03 Aligned_cols=168 Identities=23% Similarity=0.365 Sum_probs=144.7
Q ss_pred cchHHHHHHHhHcCCCCCcceE-EcCcEEEEEeeC---CCCCCCCceEeeCCcEEEEEeeEEcchhhHHHHh---CC---
Q 026270 27 KTTSTALVDRFLQTNSSAVSVQ-VGDNVTLAYTHQ---NESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY---GL--- 96 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~-~~~~~~l~~~~~---~~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~l---g~--- 96 (241)
+..+..|++.|+|||||+++++ ..++++|||+|. +...+.||+.+.+++++++|||+|||+.+|+++| |+
T Consensus 15 ~~~~~~m~~~l~hRGPD~~g~~~~~~~~~lgh~rl~i~d~~~~~qP~~~~~~~~~lv~nGeiyN~~eL~~~l~~~g~~~~ 94 (467)
T TIGR01536 15 DEAILRMSDTIAHRGPDASGIEYKDGNAILGHRRLAIIDLSGGAQPMSNEGKTYVIVFNGEIYNHEELREELEAKGYTFQ 94 (467)
T ss_pred HHHHHHHHHHhhCcCCCcCCcEEccCCEEEEEEEeEEeCCCCCCCeeECCCCCEEEEEeeEEcCHHHHHHHHHhcCCccC
Confidence 4568899999999999999999 788899999983 2334589999888899999999999999999988 33
Q ss_pred CCCCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhh
Q 026270 97 AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLK 176 (241)
Q Consensus 97 ~~~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~ 176 (241)
+.+|+|+ ++++|++|| .++++.|+|+|||++||..+++++++||++|+|||||+.. ++.++||||+++|.
T Consensus 95 ~~~D~e~--il~~y~~~g-------~~~~~~l~G~fa~~i~D~~~~~l~laRD~~G~kPLyy~~~-~~~~~faSe~kaL~ 164 (467)
T TIGR01536 95 TDSDTEV--ILHLYEEWG-------EECVDRLDGMFAFALWDSKKGELFLARDRFGIKPLYYAYD-GGQLYFASEIKALL 164 (467)
T ss_pred CCCHHHH--HHHHHHHHH-------HHHHHHcCCcEEEEEEECCCCEEEEEECCCCCcCeEEEEE-CCEEEEEecHHHHH
Confidence 5677777 569999999 8999999999999999999999999999999999999998 57899999999987
Q ss_pred hhc---------------------------CCceEEeCCCeEEEEeCCc---EEEEeC
Q 026270 177 GAC---------------------------GKSLASFPQGCFFSTAVGG---LRSFEN 204 (241)
Q Consensus 177 ~~~---------------------------~~~i~~~ppG~~~~~~~~~---~~~y~~ 204 (241)
..+ .+.|+.+|||++++++.++ .++||.
T Consensus 165 ~~~~~~~~~~d~~~l~~~l~~~~~~~~~T~~~~I~~l~pG~~l~~~~~~~~~~~~~~~ 222 (467)
T TIGR01536 165 AHPRNIKPFPDGAALAPGFGFVRVPPPSTFFRGVFELEPGHDLPLEDDGLNIERYYWE 222 (467)
T ss_pred hccccCcCCCCHHHHHHHhccCccCCCCcccCCcEEcCCCeEEEEeCCCceEEEEecC
Confidence 643 1468999999999886543 445555
No 22
>cd03766 Gn_AT_II_novel Gn_AT_II_novel. This asparagine synthase-related domain is present in eukaryotes but its function has not yet been determined. The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. This domain is related to members of the Ntn (N-terminal nucleophile) hydrolase superfamily and is found at the N-terminus of enzymes such as glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). GLMS catalyzes the formation of glucosamine 6-phosphate from fructose 6-phosphate and glutamine in amino sugar synthesis. GPATase catalyzes the first step in purine biosynthesis, an amide transfer from glutamine to PRPP, resulting in phosphoribosylamine, pyrophosphate and glutamate. Asparagine synthet
Probab=100.00 E-value=7.7e-35 Score=243.32 Aligned_cols=172 Identities=18% Similarity=0.252 Sum_probs=133.5
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEc----CcEEEEEeeC---CCCCCCCceEeeC
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVG----DNVTLAYTHQ---NESPLRQRSFAVK 73 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~----~~~~l~~~~~---~~~~~~QP~~~~~ 73 (241)
||||++.--.... .......+.+|++.|+|||||+++++.. ....|++.++ +...+.||+...+
T Consensus 1 MCGI~~~~~~~~~---------~~~~~~~~~~m~~~l~hRGPD~~~~~~~~~~~~~~~l~~~rL~i~~~~~~~QP~~~~~ 71 (181)
T cd03766 1 MCGILCSVSPSGP---------HINSSLLSEELLPNLRNRGPDYLSTRQLSVTNWTLLFTSSVLSLRGDHVTRQPLVDQS 71 (181)
T ss_pred CCcEEEEEeCCCC---------cccchhhHHHHHHHHHhcCCCccCCEEeeccccEEEEEeeEEEecCCCCCCCCCEeCC
Confidence 9999994211100 0002356789999999999999998765 3467888773 2346789999877
Q ss_pred CcEEEEEeeEEcchhhHHHHhCCCCCCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCCCC
Q 026270 74 DEIFCLFEGALDNLGSLRQQYGLAKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGK 153 (241)
Q Consensus 74 ~~~~lv~nG~I~N~~~L~~~lg~~~~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~ 153 (241)
++++++|||+|||+.+|++ +.+|+|+ ++++|++|+.. .+++.+++++|+|+|||++||..+++++++|||+|+
T Consensus 72 ~~~~lv~NGeIyN~~~l~~----s~sDtEv--i~~l~~~~g~~-~~~i~~~~~~L~G~fA~vi~d~~~~~l~~aRD~~G~ 144 (181)
T cd03766 72 TGNVLQWNGELYNIDGVED----EENDTEV--IFELLANCSSE-SQDILDVLSSIEGPFAFIYYDASENKLYFGRDCLGR 144 (181)
T ss_pred CCEEEEECCEEECcccccC----CCCHHHH--HHHHHHHHhhh-HHHHHHHHHhcccceEEEEEeCCCCEEEEEECCCCC
Confidence 7899999999999999975 5678887 46999988721 133568999999999999999988999999999999
Q ss_pred ccEEEEEeC-CCEEEEEeChhhhhhhcCCceEEeCCCeE
Q 026270 154 VPLYWGITA-DGHVAFADDADLLKGACGKSLASFPQGCF 191 (241)
Q Consensus 154 rPL~y~~~~-~g~~~faSe~~aL~~~~~~~i~~~ppG~~ 191 (241)
|||||+... ++.|+|||+..... ...+.++||+.+
T Consensus 145 rPL~y~~~~~~~~l~~aS~~~~~~---~~~~~e~~~~g~ 180 (181)
T cd03766 145 RSLLYKLDPNGFELSISSVSGSSS---GSGFQEVLAGGI 180 (181)
T ss_pred cCcEEEeeCCCCcEEEEEccCCCC---CCceEECCCCcc
Confidence 999999974 57899999975331 225889999543
No 23
>PRK09246 amidophosphoribosyltransferase; Provisional
Probab=100.00 E-value=2.4e-34 Score=273.14 Aligned_cols=209 Identities=17% Similarity=0.183 Sum_probs=161.0
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEE---------------------------cCcE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQV---------------------------GDNV 53 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~ 53 (241)
||||||-.- .+ . ....+-.|+.+|.|||||+.|++. .++.
T Consensus 1 MCGI~Gi~~--~~----------~-~~~~~~~~L~aLqHRGqdsaGi~~~~~~~~~~~k~~Glv~~vf~~~~l~~l~g~~ 67 (501)
T PRK09246 1 MCGIVGIVG--HS----------P-VNQSIYDALTVLQHRGQDAAGIVTIDGNRFRLRKANGLVRDVFRTRHMRRLQGNM 67 (501)
T ss_pred CceEEEEEc--Cc----------C-HHHHHHHHHHHHhccCcceeEEEEEeCCEEEEEccCCccccccCcchHhhCCCCE
Confidence 999999531 11 0 234567899999999999999876 3457
Q ss_pred EEEEeeC---C--CCCCCCceEe-eCCcEEEEEeeEEcchhhHHHHh----CC---CCCCchHHHHHHHHHHhhcC--C-
Q 026270 54 TLAYTHQ---N--ESPLRQRSFA-VKDEIFCLFEGALDNLGSLRQQY----GL---AKSANEVILVIEAYKALRDR--A- 117 (241)
Q Consensus 54 ~l~~~~~---~--~~~~~QP~~~-~~~~~~lv~nG~I~N~~~L~~~l----g~---~~~d~e~~lil~~~~~~g~~--g- 117 (241)
+|||+|- + ...+.||+.. ...+++++|||+|+|+++||++| +. +.+|+|++ ++++.++... +
T Consensus 68 ~IGHvRysT~G~~~~~n~QP~~~~~~~g~alahNG~I~N~~eLr~~L~~~~~~~f~s~sDsEvi--~~li~~~l~~~~g~ 145 (501)
T PRK09246 68 GIGHVRYPTAGSSSSAEAQPFYVNSPYGITLAHNGNLTNAEELRKELFEKDRRHINTTSDSEVL--LNVFAHELQKFRGL 145 (501)
T ss_pred EEEEEcCCcCCCCCcccCCCEEEeCCCCEEEEEeEEEcCHHHHHHHHHhcCCCeeecCCHHHHH--HHHHHHHHHhcccc
Confidence 9999992 1 2378999984 34569999999999999999988 22 78888884 5888766321 1
Q ss_pred -------CCcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeC---CCEEEEEeChhhhhhhcCCceEEeC
Q 026270 118 -------PYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITA---DGHVAFADDADLLKGACGKSLASFP 187 (241)
Q Consensus 118 -------~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~---~g~~~faSe~~aL~~~~~~~i~~~p 187 (241)
.+++.++++.|+|+||++++.. .++|+++|||+|+|||||+..+ ++.++||||.+||.....+.+++|+
T Consensus 146 ~~~~~~l~eai~~~~~~l~Gays~v~~~~-~~~l~a~RDp~GirPL~~g~~~~~~~~~~~~ASE~~Al~~~g~~~ir~v~ 224 (501)
T PRK09246 146 PLTPEDIFAAVAAVHRRVRGAYAVVAMII-GHGLVAFRDPHGIRPLVLGKRETEGGTEYMVASESVALDALGFEFVRDVA 224 (501)
T ss_pred ccCccCHHHHHHHHHHhcccceeeEEEec-CCcEEEEECCCCCCCeEEEeecCCCCCEEEEEECHHHHHhCCceEEEEeC
Confidence 1346789999999999998753 4679999999999999999873 3479999999999998877899999
Q ss_pred CCeEEEEeCCc-EEEEe---CCCCC-----CccCCCCcceeeCce-eE
Q 026270 188 QGCFFSTAVGG-LRSFE---NPKNK-----ITAVPAAEEEIWGAT-FK 225 (241)
Q Consensus 188 pG~~~~~~~~~-~~~y~---~~~~~-----~~~~~r~ds~i~g~~-~~ 225 (241)
|||++++++++ ..+.. .+.++ ..|++|+||.|.|.. |.
T Consensus 225 PGeiv~i~~~g~~~~~~~~~~~~~~~c~fe~vY~~r~ds~i~g~~vy~ 272 (501)
T PRK09246 225 PGEAIYITEDGQLHTRQCAENPKLNPCIFEYVYFARPDSIIDGISVYK 272 (501)
T ss_pred CCeEEEEECCCcEehhhhcCCCCCcceEEEEEEcCCchhhccCeeHHh
Confidence 99999998766 43221 22222 229999999999997 43
No 24
>TIGR01134 purF amidophosphoribosyltransferase. Alternate name: glutamine phosphoribosylpyrophosphate (PRPP) amidotransferase.
Probab=100.00 E-value=1.5e-33 Score=264.31 Aligned_cols=193 Identities=18% Similarity=0.157 Sum_probs=154.3
Q ss_pred cchHHHHHHHhHcCCCCCcceEE---------------------------cCcEEEEEeeCC-----CCCCCCceEe-eC
Q 026270 27 KTTSTALVDRFLQTNSSAVSVQV---------------------------GDNVTLAYTHQN-----ESPLRQRSFA-VK 73 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~~l~~~~~~-----~~~~~QP~~~-~~ 73 (241)
......|+.+|.|||+|+.|+.. .+..+|||+|.. ...+.||+.. ..
T Consensus 14 ~~~~~~~L~~lqhRG~ds~Gia~~d~~~~~~~k~~glv~~v~~~~~l~~l~g~~~IgHvR~aT~G~~~~~n~QPf~~~~~ 93 (442)
T TIGR01134 14 ASLTYYGLYALQHRGQEAAGIAVSDGNKIRTHKGNGLVSDVFDERHLERLKGNVGIGHVRYSTAGSSSLSNAQPFVVNSP 93 (442)
T ss_pred HHHHHHHHHHHHhhCccceEEEEEeCCEEEEEEcCCchhhhcchhhhhcccCcEEEEEEEecCCCCCCccCCCCEEEeCC
Confidence 35566799999999999999763 234789999921 2367899984 34
Q ss_pred CcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCC-C--CcHHHHhccccccceEEEEEcCCCEE
Q 026270 74 DEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRA-P--YPPNHVVGHLSGYFAFIVYDKSTSTL 144 (241)
Q Consensus 74 ~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g-~--~~i~~~l~~L~G~fa~vi~d~~~~~l 144 (241)
++++++|||+|+|+++|+++| |. +.+|+|+ ++++|.+++..+ . +++.+++++|+|+|||+++| .++|
T Consensus 94 ~g~alahNG~I~N~~eLr~~L~~~g~~f~~~sDSEv--i~~li~~~~~~~~~~~~ai~~~~~~l~G~falvi~~--~~~L 169 (442)
T TIGR01134 94 GGIALAHNGNLVNAEELREELEEEGRIFNTTSDSEV--LLHLLARERLEEDDLFEAIARVLKRVRGAYALVIMI--GDGL 169 (442)
T ss_pred CCEEEEEEEEEcCHHHHHHHHHhcCCcCCCCCHHHH--HHHHHHHhhcccCCHHHHHHHHHHHhCccceEEEEE--CCEE
Confidence 569999999999999999988 32 6778887 468888765211 1 45678999999999999997 4799
Q ss_pred EEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEEEEeCCCCC-------CccCCCCcc
Q 026270 145 FVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENPKNK-------ITAVPAAEE 217 (241)
Q Consensus 145 ~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~~~y~~~~~~-------~~~~~r~ds 217 (241)
+++||++|+|||||+.. ++.++||||.++|.....+.+++|+||+++++++++++++..+..+ +.||+||||
T Consensus 170 ~a~RD~~G~rPL~~g~~-~~~~~~ASE~~al~~~g~~~~r~v~pGeiv~i~~~~~~~~~~~~~~~~~c~fe~vYfarpds 248 (442)
T TIGR01134 170 IAVRDPHGIRPLVLGKR-GDGYVVASESCALDILGAEFIRDVEPGEAVVIDDGGLESRLFANTPRAPCIFEYVYFARPDS 248 (442)
T ss_pred EEEECCCCCCCcEEEEe-CCEEEEEeCchHhcccCCcEEEEECCCeEEEEECCcEEEEeccCCCCcceEEEEEEecCCcc
Confidence 99999999999999998 4679999999999876667899999999999988877664332222 229999999
Q ss_pred eeeCcee
Q 026270 218 EIWGATF 224 (241)
Q Consensus 218 ~i~g~~~ 224 (241)
.|+|.+=
T Consensus 249 ~~~g~~v 255 (442)
T TIGR01134 249 VIDGISV 255 (442)
T ss_pred eECCeEH
Confidence 9999763
No 25
>cd00715 GPATase_N Glutamine amidotransferases class-II (GN-AT)_GPAT- type. This domain is found at the N-terminus of glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase) . The glutaminase domain catalyzes amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. GPATase catalyzes the first step in purine biosynthesis, an amide transfer from glutamine to PRPP, resulting in phosphoribosylamine, pyrophosphate and glutamate. GPATase crystalizes as a homotetramer, but can also exist as a homdimer.
Probab=100.00 E-value=2.2e-33 Score=245.65 Aligned_cols=190 Identities=14% Similarity=0.117 Sum_probs=151.3
Q ss_pred cchHHHHHHHhHcCCCCCcceEEc---------------------------CcEEEEEeeCC-----CCCCCCceEee--
Q 026270 27 KTTSTALVDRFLQTNSSAVSVQVG---------------------------DNVTLAYTHQN-----ESPLRQRSFAV-- 72 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~---------------------------~~~~l~~~~~~-----~~~~~QP~~~~-- 72 (241)
...+..|++.|+|||||+.|+... ...+|||+|.. ...+.||+...
T Consensus 13 ~~~~~~~l~~l~~RG~D~~Gi~~~d~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~lgH~R~at~g~~~~~n~qPf~~~~~ 92 (252)
T cd00715 13 ARLTYLGLYALQHRGQESAGIATSDGKRFHTHKGMGLVSDVFDEEKLRRLPGNIAIGHVRYSTAGSSSLENAQPFVVNSP 92 (252)
T ss_pred HHHHHHHHHHHhccCcceeEEEEEeCCEEEEEecCCcHHHhhcccchhhCCCcEEEEEEEcccCCCCCccCCCCcEEecC
Confidence 455678999999999999997642 23589999921 13678999863
Q ss_pred CCcEEEEEeeEEcchhhHHHHhC---C---CCCCchHHHHHHHHHHhhcCCC--CcHHHHhccccccceEEEEEcCCCEE
Q 026270 73 KDEIFCLFEGALDNLGSLRQQYG---L---AKSANEVILVIEAYKALRDRAP--YPPNHVVGHLSGYFAFIVYDKSTSTL 144 (241)
Q Consensus 73 ~~~~~lv~nG~I~N~~~L~~~lg---~---~~~d~e~~lil~~~~~~g~~g~--~~i~~~l~~L~G~fa~vi~d~~~~~l 144 (241)
+++++++|||+|+|+++|+++|. . +.+|+|++ ++++.+|++.+. +++.++++.|+|.||++++|. ++|
T Consensus 93 ~~~~~~~hNG~I~n~~~L~~~l~~~g~~~~~~tDSEvi--~~l~~~~~~~~~~~~al~~~~~~l~G~~a~~~~d~--~~l 168 (252)
T cd00715 93 LGGIALAHNGNLVNAKELREELEEEGRIFQTTSDSEVI--LHLIARSLAKDDLFEAIIDALERVKGAYSLVIMTA--DGL 168 (252)
T ss_pred CCcEEEEEEEEECCHHHHHHHHHHCCCcccCCCHHHHH--HHHHHHhhccCCHHHHHHHHHHhccCceEEEEEEC--CEE
Confidence 57899999999999999999872 2 57788874 688988874311 456789999999999999997 899
Q ss_pred EEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEEEEeCCC-C--CCc-----cCCCCc
Q 026270 145 FVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENPK-N--KIT-----AVPAAE 216 (241)
Q Consensus 145 ~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~~~y~~~~-~--~~~-----~~~r~d 216 (241)
+++||++|.|||||+..+++.++||||.++|.....+.+++||||++++++.+++..+..+. . +.. |++|||
T Consensus 169 ~~~RD~~G~~PL~~~~~~~~~~~vASE~~al~~~~~~~~~~l~pg~~~~i~~~~~~~~~~~~~~~~~~c~~e~~y~~~~~ 248 (252)
T cd00715 169 IAVRDPHGIRPLVLGKLEGDGYVVASESCALDIIGAEFVRDVEPGEIVVIDDDGLESSQRAPKPKPAPCIFEYVYFARPD 248 (252)
T ss_pred EEEECCCCCCCeEEEEeCCCeEEEEECHHHhcccCCcEEEEcCCCeEEEEECCceEEEEecCCCCCCcceEEEEeecCCc
Confidence 99999999999999998437899999999998865567999999999999877765553321 2 212 999999
Q ss_pred ceee
Q 026270 217 EEIW 220 (241)
Q Consensus 217 s~i~ 220 (241)
|+|+
T Consensus 249 ~~~~ 252 (252)
T cd00715 249 SVID 252 (252)
T ss_pred cccC
Confidence 9874
No 26
>KOG0571 consensus Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=100.00 E-value=2.7e-34 Score=260.12 Aligned_cols=190 Identities=25% Similarity=0.405 Sum_probs=163.3
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEcCcEEEEEee---CCCCCCCCceEeeCCcEE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTH---QNESPLRQRSFAVKDEIF 77 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~~~~~l~~~~---~~~~~~~QP~~~~~~~~~ 77 (241)
|||||.-....-|+- ......++.+.+.|||||+++..+.....|+|.| .+...+.||++..++.++
T Consensus 1 MCGI~Av~~~~~~~~----------~~~~~l~ls~~~~hRgpd~sg~~~~~~~~l~heRLAIvdp~sg~QPi~~~~~~~~ 70 (543)
T KOG0571|consen 1 MCGILAVLGHEDSEA----------KKPKALELSRRIRHRGPDWSGLAQRNDNILGHERLAIVDPTSGAQPIVGEDGTYV 70 (543)
T ss_pred CCceeeeecccchhh----------cChhhhhHHHhhcCCCCCcchhheeccccccccceeEecCCcCCcccccCCCcEE
Confidence 999997543111111 3445566889999999999998887767888877 345578999999889999
Q ss_pred EEEeeEEcchhhHHHHhC-C---CCCCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCCCC
Q 026270 78 CLFEGALDNLGSLRQQYG-L---AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGK 153 (241)
Q Consensus 78 lv~nG~I~N~~~L~~~lg-~---~~~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~ 153 (241)
+..||||||+.+||+.+. + +.+|+|++ +++|.+.|+ .++...|+|+|||+++|.+.+++++|||++|+
T Consensus 71 ~~vNGEIYNH~~Lr~~~~~~~~~T~sDcEvI--i~lY~khg~------~~~~~~LDG~Fafvl~d~~~~kv~~aRDpiGv 142 (543)
T KOG0571|consen 71 VTVNGEIYNHKKLREHCKDFEFQTGSDCEVI--IHLYEKHGG------EQAICMLDGVFAFVLLDTKDDKVVAARDPIGV 142 (543)
T ss_pred EEECceeccHHHHHHHhhhcccccCCCceee--eehHhhcCc------hhHHHHhhhheEEEEecCCCCeEEeccCCcCc
Confidence 999999999999999884 3 78999995 699999852 78999999999999999999999999999999
Q ss_pred ccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEEEEeCCCCCC
Q 026270 154 VPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENPKNKI 209 (241)
Q Consensus 154 rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~~~y~~~~~~~ 209 (241)
+|||||.+.++.++||||.+.|...|.+ |+.|||||++.++.+++.||++|+|-.
T Consensus 143 ~~lY~g~~~~gs~~~aSe~k~l~d~C~~-i~~fpPgh~y~~~~~~~~r~f~p~w~~ 197 (543)
T KOG0571|consen 143 TPLYYGWDSDGSVYFASEMKCLEDDCEK-IESFPPGHYYTSKTGKLTRYFNPEWFD 197 (543)
T ss_pred eeeEEEecCCCcEEEeeehhhhhhhhhc-eeecCCcceeecccccccCCCCchhhh
Confidence 9999999877899999999999999975 899999999999999999999999853
No 27
>COG0034 PurF Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=100.00 E-value=5.5e-32 Score=247.91 Aligned_cols=209 Identities=20% Similarity=0.208 Sum_probs=162.2
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEcC----------------------------c
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGD----------------------------N 52 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~~----------------------------~ 52 (241)
||||||-. .+++ ++ ..+..-..+-+|.|||.++.|+...+ .
T Consensus 4 ~CGV~Gi~--~~~~--~~-------a~~~~y~gL~aLQHRGQeaAGI~~~dg~~~~~~K~~GLV~dvF~~~~~~~~l~G~ 72 (470)
T COG0034 4 MCGVFGIW--GHKD--NN-------AAQLTYYGLYALQHRGQEAAGIAVADGKRFHTHKGMGLVSDVFNERDLLRKLQGN 72 (470)
T ss_pred cceEEEEe--cCCc--cc-------hHHHHHHHHHHHhhCCcccccEEEEcCceEEEEecCccchhhcCchhhhhhccCc
Confidence 99999943 2321 11 24566779999999999998864332 2
Q ss_pred EEEEEee----C-CCCCCCCceEee--CCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhc-CCC
Q 026270 53 VTLAYTH----Q-NESPLRQRSFAV--KDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRD-RAP 118 (241)
Q Consensus 53 ~~l~~~~----~-~~~~~~QP~~~~--~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~-~g~ 118 (241)
.++||+| + ..-.+.||++.. .+.++++|||+|.|..+||++| |. +.+|||++ ++++.+... .+.
T Consensus 73 ~~IGHvRYsTaG~s~~~naQP~~~~~~~g~ialaHNGnl~N~~~Lr~~l~~~g~~f~t~sDsEvl--l~l~a~~~~~~~~ 150 (470)
T COG0034 73 VGIGHVRYSTAGSSSIENAQPFYVNSPGGGIALAHNGNLVNAEELRRELEEEGAIFNTTSDSEVL--LHLLARELDEDDI 150 (470)
T ss_pred ceeeEeeecCCCCcccccccceEEecCCCcEEEEecCcccCHHHHHHHHHhcCceecCCccHHHH--HHHHHhhcccccH
Confidence 3789999 1 124778999865 3469999999999999999998 43 78888985 588876432 122
Q ss_pred -CcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEe--
Q 026270 119 -YPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTA-- 195 (241)
Q Consensus 119 -~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~-- 195 (241)
+++.++++.++|.||++++.. ++|+++|||.|+|||.+|..+||.++||||.+||...+++.++++.||++++++
T Consensus 151 ~~a~~~~~~~v~G~ys~v~~~~--~~lia~RDP~GiRPL~iG~~~dG~yvvaSEt~Ald~iGa~~vRdv~pGE~v~i~~~ 228 (470)
T COG0034 151 FEAVKEVLRRVKGAYALVALIK--DGLIAVRDPNGIRPLVLGKLGDGFYVVASETCALDILGAEFVRDVEPGEAVIITID 228 (470)
T ss_pred HHHHHHHHhhcCCcEEEEEEEC--CeEEEEECCCCCccceeeecCCCCEEEEechhhhhcccceEEEecCCceEEEEEec
Confidence 567889999999999999985 599999999999999999985566999999999999999999999999998843
Q ss_pred CCcEEEE--eCCCC-C-----CccCCCCcceeeCcee
Q 026270 196 VGGLRSF--ENPKN-K-----ITAVPAAEEEIWGATF 224 (241)
Q Consensus 196 ~~~~~~y--~~~~~-~-----~~~~~r~ds~i~g~~~ 224 (241)
+.++.++ ..+.. + +.||+||||.|+|.+-
T Consensus 229 ~~g~~s~~~~~~~~~~~C~fEyVYFARPDS~Idg~sV 265 (470)
T COG0034 229 GDGLESKQVAEPPRRAPCSFEYVYFARPDSVIDGISV 265 (470)
T ss_pred CceeEEEeccCCCCCccceEEEEEeecCccccCCeeH
Confidence 3345544 33422 2 3399999999999864
No 28
>cd00714 GFAT Glutamine amidotransferases class-II (Gn-AT)_GFAT-type. This domain is found at the N-terminus of glucosamine-6P synthase (GlmS, or GFAT in humans). The glutaminase domain catalyzes amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. In humans, GFAT catalyzes the first and rate-limiting step of hexosamine metabolism, the conversion of D-fructose-6P (Fru6P) into D-glucosamine-6P using L-glutamine as a nitrogen source. The end product of this pathway, UDP-N-acetyl glucosamine, is a major building block of the bacterial peptidoglycan and fungal chitin.
Probab=99.98 E-value=2.9e-31 Score=227.22 Aligned_cols=160 Identities=20% Similarity=0.241 Sum_probs=133.3
Q ss_pred cchHHHHHHHhHcCCCCCcceEEc---------------------------CcEEEEEeeC---CC--CCCCCceEeeCC
Q 026270 27 KTTSTALVDRFLQTNSSAVSVQVG---------------------------DNVTLAYTHQ---NE--SPLRQRSFAVKD 74 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~---------------------------~~~~l~~~~~---~~--~~~~QP~~~~~~ 74 (241)
...+..|+.+|+|||||+.+++.. +.++|||+|. +. ..+.||+...++
T Consensus 13 ~~~~~~~l~~l~hRG~d~~Gi~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~igH~R~at~g~~~~~n~qPf~~~~~ 92 (215)
T cd00714 13 VDILLEGLKRLEYRGYDSAGIAVIGDGSLEVVKAVGKVANLEEKLAEKPLSGHVGIGHTRWATHGEPTDVNAHPHRSCDG 92 (215)
T ss_pred HHHHHHHHHHHhccCcCcceEEEEeCCEEEEEEcCccHHHHHHHhhhccCCccEEEEEEEccCCCCCCccCCCCCCcCCC
Confidence 356678999999999999998764 3468999992 11 357899987777
Q ss_pred cEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC---CcHHHHhccccccceEEEEEcCC-CEE
Q 026270 75 EIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP---YPPNHVVGHLSGYFAFIVYDKST-STL 144 (241)
Q Consensus 75 ~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~---~~i~~~l~~L~G~fa~vi~d~~~-~~l 144 (241)
+++++|||+|||+++|+++| |+ +.+|+|++ +++|.+++..+. ++++++++.|+|+|||++||... ++|
T Consensus 93 ~~~~vhNG~I~N~~~Lr~~L~~~g~~~~~~sDsEvi--~~l~~~~~~~~~~~~~ai~~~~~~l~G~fa~~~~d~~~~~~l 170 (215)
T cd00714 93 EIAVVHNGIIENYAELKEELEAKGYKFESETDTEVI--AHLIEYYYDGGLDLLEAVKKALKRLEGAYALAVISKDEPDEI 170 (215)
T ss_pred CEEEEEeEEEcCHHHHHHHHHhcCCcccCCCHHHHH--HHHHHHHHhcCCCHHHHHHHHHHHhccceEEEEEEeCCCCEE
Confidence 89999999999999999998 44 67888874 688988864332 45678999999999999999875 499
Q ss_pred EEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEE
Q 026270 145 FVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFS 193 (241)
Q Consensus 145 ~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~ 193 (241)
+++|| .|||||+.. ++.++||||.++|...+. .+..+.+|+++.
T Consensus 171 ~~~RD---~~PL~~~~~-~~~~~~aSE~~al~~~~~-~~~~~~~~~~~~ 214 (215)
T cd00714 171 VAARN---GSPLVIGIG-DGENFVASDAPALLEHTR-RVIYLEDGDIAV 214 (215)
T ss_pred EEEEC---CCCcEEEEc-CCeEEEEECHHHHHHhcC-EEEEECCCCEEe
Confidence 99999 499999997 568999999999999886 489999999864
No 29
>PRK00331 glucosamine--fructose-6-phosphate aminotransferase; Reviewed
Probab=99.97 E-value=9.5e-31 Score=254.10 Aligned_cols=183 Identities=17% Similarity=0.235 Sum_probs=148.6
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEE---------------------------cCcE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQV---------------------------GDNV 53 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~ 53 (241)
||||||-- ... . ....+..|+..|.|||||+.|++. .+..
T Consensus 1 MCGI~g~~--~~~----------~-~~~~~~~~l~~l~hRG~d~~Gi~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~g~~ 67 (604)
T PRK00331 1 MCGIVGYV--GQR----------N-AAEILLEGLKRLEYRGYDSAGIAVLDDGGLEVRKAVGKVANLEAKLEEEPLPGTT 67 (604)
T ss_pred CcEEEEEE--cCc----------c-HHHHHHHHHHHHhccCcCcceEEEEeCCEEEEEECCcCHHHHHhhhccccCCCcE
Confidence 99999942 110 0 135667899999999999999876 2347
Q ss_pred EEEEeeC---CC--CCCCCceEeeCCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC---C
Q 026270 54 TLAYTHQ---NE--SPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP---Y 119 (241)
Q Consensus 54 ~l~~~~~---~~--~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~---~ 119 (241)
+|||+|. +. ..+.||+.+.+++++++|||+|||+++|+++| |+ +.+|+|++ +++|.++.+.|. +
T Consensus 68 ~igH~R~at~g~~~~~n~qP~~~~~~~~~~vhNG~I~N~~~Lr~~l~~~g~~~~~~sDsEvi--~~l~~~~~~~g~~~~~ 145 (604)
T PRK00331 68 GIGHTRWATHGKPTERNAHPHTDCSGRIAVVHNGIIENYAELKEELLAKGHVFKSETDTEVI--AHLIEEELKEGGDLLE 145 (604)
T ss_pred EEEEEecCCCCCCccccCCccccCCCCEEEEEeEEEcCHHHHHHHHHhCCCcccCCCHHHHH--HHHHHHHHhhCCCHHH
Confidence 8999992 22 35789998777899999999999999999998 44 67788874 688887743332 4
Q ss_pred cHHHHhccccccceEEEEEcCC-CEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCc
Q 026270 120 PPNHVVGHLSGYFAFIVYDKST-STLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGG 198 (241)
Q Consensus 120 ~i~~~l~~L~G~fa~vi~d~~~-~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~ 198 (241)
++.+++++|+|+|||++||... ++++++||+ |||||+.. ++.++||||.++|...+. .+++|+||+++++++++
T Consensus 146 a~~~~~~~l~G~~a~~~~d~~~~~~l~~~Rd~---~PL~~g~~-~~~~~~aSE~~al~~~~~-~~~~l~pg~~~~i~~~~ 220 (604)
T PRK00331 146 AVRKALKRLEGAYALAVIDKDEPDTIVAARNG---SPLVIGLG-EGENFLASDALALLPYTR-RVIYLEDGEIAVLTRDG 220 (604)
T ss_pred HHHHHHHhccCeeEEEEEecCCCCEEEEEECC---CceEEEEc-CCeEEEEECHHHHHHhcC-EEEEECCCeEEEEECCe
Confidence 6788999999999999999875 899999995 99999997 467999999999999875 58999999999987777
Q ss_pred EEEEe
Q 026270 199 LRSFE 203 (241)
Q Consensus 199 ~~~y~ 203 (241)
++.+.
T Consensus 221 ~~~~~ 225 (604)
T PRK00331 221 VEIFD 225 (604)
T ss_pred EEEEe
Confidence 76654
No 30
>cd01907 GlxB Glutamine amidotransferases class-II (Gn-AT)_GlxB-type. GlxB is a glutamine amidotransferase-like protein of unknown function found in bacteria and archaea. GlxB has a structural fold similar to that of other class II glutamine amidotransferases including glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The GlxB fold is also somewhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.
Probab=99.97 E-value=2.3e-29 Score=219.98 Aligned_cols=160 Identities=18% Similarity=0.144 Sum_probs=128.8
Q ss_pred cchHHHHHHHhHcCCC-CCcceEEc------------------------------------CcEEEEEeeCC-----CCC
Q 026270 27 KTTSTALVDRFLQTNS-SAVSVQVG------------------------------------DNVTLAYTHQN-----ESP 64 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGp-d~~~~~~~------------------------------------~~~~l~~~~~~-----~~~ 64 (241)
...+..|+.+|.|||+ |+.|+... +..+|||+|.. ...
T Consensus 16 ~~~~~~~l~~lqhRG~~dsaGia~~~~~~~~~~s~~~~~~~~K~~G~~~~v~~~~~~~~~~~~~~igH~R~aT~g~~~~~ 95 (249)
T cd01907 16 GALLVEMLDAMQERGPGDGAGFALYGDPDAFVYSSGKDMEVFKGVGYPEDIARRYDLEEYKGYHWIAHTRQPTNSAVWWY 95 (249)
T ss_pred HHHHHHHHHHHHhcCCCCCceEEEEcCCCeEEEecCCCeEEEeeccCHHHHHhhcCchheEEEEEEEEEeccCCCCCCcc
Confidence 5677789999999999 99998763 34789999931 135
Q ss_pred CCCceEeeCCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcC-CC--C----------------
Q 026270 65 LRQRSFAVKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDR-AP--Y---------------- 119 (241)
Q Consensus 65 ~~QP~~~~~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~-g~--~---------------- 119 (241)
+.||+.. ++++++|||+|+|+++|+++| |+ +.+|+|++ ++++...... +. +
T Consensus 96 n~qP~~~--~~~~lvhNG~I~N~~~lr~~L~~~g~~~~~~sDsEvi--~~ll~~~~~~~g~~~~a~~~~i~~~~~~~~~~ 171 (249)
T cd01907 96 GAHPFSI--GDIAVVHNGEISNYGSNREYLERFGYKFETETDTEVI--AYYLDLLLRKGGLPLEYYKHIIRMPEEERELL 171 (249)
T ss_pred CCCCeec--CCEEEEeCCeecCHHHHHHHHHhcCCCCCCCCHHHHH--HHHHHHHHHhCCChHHHHHHHhcCCHhHHHHH
Confidence 7899975 489999999999999999988 43 78888874 5666542211 11 1
Q ss_pred ---cHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhc---CCceEEeCCCeEEE
Q 026270 120 ---PPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGAC---GKSLASFPQGCFFS 193 (241)
Q Consensus 120 ---~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~---~~~i~~~ppG~~~~ 193 (241)
++..+++.|+|+|||++++. ++++++|||+|.|||||+.. ++.++||||.++|...+ .+.+.++.||++++
T Consensus 172 ~~~~~~~~~~~l~G~~a~~~~~~--~~~~~~RD~~G~rPL~~g~~-~~~~~~ASE~~al~~~~~~~~~~~~~l~pGe~v~ 248 (249)
T cd01907 172 LALRLTYRLADLDGPFTIIVGTP--DGFIVIRDRIKLRPAVVAET-DDYVAIASEECAIREIPDRDNAKVWEPRPGEYVI 248 (249)
T ss_pred HHHHHHhCcccCCCCEEEEEEeC--CeEEEEecCCCCccEEEEEE-CCEEEEEEcHHHHhccCccchheEecCCCCceEe
Confidence 23468899999999999985 67999999999999999998 56899999999999875 56789999999875
No 31
>TIGR01135 glmS glucosamine--fructose-6-phosphate aminotransferase (isomerizing). The member from Methanococcus jannaschii contains an intein.
Probab=99.97 E-value=2.7e-29 Score=244.11 Aligned_cols=169 Identities=18% Similarity=0.232 Sum_probs=140.7
Q ss_pred chHHHHHHHhHcCCCCCcceEE---------------------------cCcEEEEEeeC---C--CCCCCCceEeeCCc
Q 026270 28 TTSTALVDRFLQTNSSAVSVQV---------------------------GDNVTLAYTHQ---N--ESPLRQRSFAVKDE 75 (241)
Q Consensus 28 ~~~~~m~~~l~~RGpd~~~~~~---------------------------~~~~~l~~~~~---~--~~~~~QP~~~~~~~ 75 (241)
..+..|+.+|.|||||+.|++. .+.++|||+|. + ...+.||+...+++
T Consensus 14 ~~~~~~l~~l~hRG~ds~Gi~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~igH~R~at~g~~~~~n~qP~~~~~~~ 93 (607)
T TIGR01135 14 PILLEGLKRLEYRGYDSAGIAVVDEGKLFVRKAVGKVQELANKLGEKPLPGGVGIGHTRWATHGKPTEENAHPHTDEGGR 93 (607)
T ss_pred HHHHHHHHHHhccCcccceEEEEeCCEEEEEECCcCHHHHHhhhhcccCCccEEEEEeeccCCCCCCccCCCCcCcCCCC
Confidence 5677899999999999999876 23468999992 2 13578999877788
Q ss_pred EEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC---CcHHHHhccccccceEEEEEcCC-CEEE
Q 026270 76 IFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP---YPPNHVVGHLSGYFAFIVYDKST-STLF 145 (241)
Q Consensus 76 ~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~---~~i~~~l~~L~G~fa~vi~d~~~-~~l~ 145 (241)
++++|||+|||+++||++| |+ +.+|+|++ +++|.++++.+. +++.++++.|+|+|||++||... ++|+
T Consensus 94 ~~~vhNG~I~N~~~Lr~~L~~~g~~~~~~tDsEvi--~~l~~~~~~~~~~~~~ai~~~~~~l~G~~a~~i~~~~~~~~l~ 171 (607)
T TIGR01135 94 IAVVHNGIIENYAELREELEARGHVFVSDTDTEVI--AHLIEEYLREGGDLLEAVQKALKQLRGAYALAVLHADHPETLV 171 (607)
T ss_pred EEEEEecccCCHHHHHHHHHhCCCccccCCHHHHH--HHHHHHHHhcCCCHHHHHHHHHHHhcCceEEEEEecCCCCEEE
Confidence 9999999999999999998 44 67788874 689998875332 45778999999999999999765 5699
Q ss_pred EEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEEEEe
Q 026270 146 VASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFE 203 (241)
Q Consensus 146 ~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~~~y~ 203 (241)
++||+ |||||+.. ++.++||||.++|...+. .+.+||||+++.++.+++..+.
T Consensus 172 ~~Rd~---~PL~~~~~-~~~~~~aSE~~al~~~~~-~~~~l~pg~~~~~~~~~~~~~~ 224 (607)
T TIGR01135 172 AARSG---SPLIVGLG-DGENFVASDVTALLPVTR-RVIYLEDGDIAILTRDGVRIYN 224 (607)
T ss_pred EEECC---CceEEEEC-CCeEEEEEChHHHHhhCC-EEEEeCCCeEEEEECCeeEEEe
Confidence 99995 99999997 568999999999998875 5889999999998877776554
No 32
>cd01909 betaLS_CarA_N Glutamine amidotransferases class-II (GATase) asparagine synthase_betaLS-type. Carbapenam synthetase (CarA) is an ATP/Mg2+-dependent enzyme that catalyzes the formation of the beta-lactam ring in (5R)-carbapenem-3-carboxylic acid biosynthesis. CarA is homologous to beta-lactam synthetase (beta-LS), which is involved in the biosynthesis of clavulanic acid, a clinically important beta-lactamase inhibitor. CarA and beta-LS each have two distinct domains, an N-terminal Ntn hydrolase domain and a C-terminal synthetase domain, a domain architecture similar to that of the class-B asparagine synthetases (AS-B's). The N-terminal domain of these enzymes hydrolyzes glutamine to glutamate and ammonia. CarA forms a homotetramer while betaLS forms a heterodimer. The N-terminal folds of CarA and beta-LS are similar to those of other class II glutamine amidotransferases including lucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (
Probab=99.96 E-value=3.6e-29 Score=211.50 Aligned_cols=121 Identities=23% Similarity=0.285 Sum_probs=103.7
Q ss_pred CCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEE
Q 026270 73 KDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFV 146 (241)
Q Consensus 73 ~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~ 146 (241)
.+++++++||||||+.+|+++| +. +.+|+|+ ++++|++|| .+++++|+|+|||+|||.+ ++|++
T Consensus 49 ~~~~~iv~NGEIYN~~eLr~~L~~~g~~f~t~sDtEv--ll~~y~~~G-------~~~l~~L~G~FAfai~D~~-~~L~l 118 (199)
T cd01909 49 SETGTAYLIGELYNRDELRSLLGAGEGRSAVLGDAEL--LLLLLTRLG-------LHAFRLAEGDFCFFIEDGN-GRLTL 118 (199)
T ss_pred CCCEEEEEEEEEeCHHHHHHHHHhcCCCcCCCCHHHH--HHHHHHHHh-------HHHHHHcCEEEEEEEEcCC-CEEEE
Confidence 4579999999999999999998 32 5667777 579999999 8999999999999999998 99999
Q ss_pred EEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcC-----------------CceEEeCCCeEEEEeCC-------cEEEE
Q 026270 147 ASDQFGKVPLYWGITADGHVAFADDADLLKGACG-----------------KSLASFPQGCFFSTAVG-------GLRSF 202 (241)
Q Consensus 147 aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~-----------------~~i~~~ppG~~~~~~~~-------~~~~y 202 (241)
||||+|+|||||... +.++||||+++|.+++. +.|+.||||++++++.. ...+|
T Consensus 119 aRDr~GikPLYy~~~--~~l~FASEikaLla~~~~~~~~d~~~~~~~~T~~~gI~rL~PG~~l~~~~~g~~~~~~~~~~y 196 (199)
T cd01909 119 ATDHAGSVPVYLVQA--GEVWATTELKLLAAHEGPKAFPFKSAGADTVSGLTGVQRVPPGTVNVLTFDGGSYGTAESRRT 196 (199)
T ss_pred EECCCCCcCeEEEEC--CeEEEEeCHHHHhhCcCCCcccCcccCCCCCChhcCceEECCCcEEEEeeCCcccceEEEEEe
Confidence 999999999999886 57999999999976521 46999999999877532 26678
Q ss_pred eCC
Q 026270 203 ENP 205 (241)
Q Consensus 203 ~~~ 205 (241)
|.|
T Consensus 197 W~p 199 (199)
T cd01909 197 WTP 199 (199)
T ss_pred ecC
Confidence 876
No 33
>PTZ00295 glucosamine-fructose-6-phosphate aminotransferase; Provisional
Probab=99.96 E-value=1.7e-28 Score=239.87 Aligned_cols=183 Identities=15% Similarity=0.227 Sum_probs=145.3
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEc------------------------------
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVG------------------------------ 50 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~------------------------------ 50 (241)
||||||-. ..+ .....+-.++.+|.|||+|+.|+...
T Consensus 24 MCGI~G~~--~~~-----------~~~~~~~~~l~~L~hRG~ds~Gia~~~~~~~~~~~k~~g~g~v~~~~~~~~~~~~~ 90 (640)
T PTZ00295 24 CCGIVGYL--GNE-----------DASKILLEGIEILQNRGYDSCGISTISSGGELKTTKYASDGTTSDSIEILKEKLLD 90 (640)
T ss_pred CCeEEEEE--cCc-----------chHHHHHHHHHHHHhcCCCeeEEEEEeCCCcEEEEEeCCCCchHHHHHHHHHHhhc
Confidence 99999942 111 02455678999999999999987651
Q ss_pred ----CcEEEEEeeC---C--CCCCCCceEeeCCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhc
Q 026270 51 ----DNVTLAYTHQ---N--ESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRD 115 (241)
Q Consensus 51 ----~~~~l~~~~~---~--~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~ 115 (241)
+..+|||+|. + ...+.||+...+++++++|||+|+|+++||++| |+ +.+|+|++ ++++.+..+
T Consensus 91 ~~~~~~~~igH~R~at~g~~~~~n~qP~~~~~~~~~~vhNG~I~N~~~Lr~~L~~~g~~f~s~tDsEvi--~~li~~~~~ 168 (640)
T PTZ00295 91 SHKNSTIGIAHTRWATHGGKTDENAHPHCDYKKRIALVHNGTIENYVELKSELIAKGIKFRSETDSEVI--ANLIGLELD 168 (640)
T ss_pred CCCCCcEEEEEeccccCCCCCcCCCCCCCCCCCCEEEEEEEEEcCHHHHHHHHHHCCCcccCCChHHHH--HHHHHHHHh
Confidence 1248999992 2 236789998767899999999999999999988 44 67888875 577764322
Q ss_pred CCC---CcHHHHhccccccceEEEEEcC-CCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeE
Q 026270 116 RAP---YPPNHVVGHLSGYFAFIVYDKS-TSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCF 191 (241)
Q Consensus 116 ~g~---~~i~~~l~~L~G~fa~vi~d~~-~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~ 191 (241)
.+. +++.+++++|+|+|||++||.. .++|+++||+ |||||+.. ++.++||||.++|...+.+ +..++||++
T Consensus 169 ~g~~~~~a~~~~~~~l~G~~a~~~~~~~~~~~l~~~Rd~---~PL~~g~~-~~~~~~aSE~~al~~~~~~-~~~l~pGei 243 (640)
T PTZ00295 169 QGEDFQEAVKSAISRLQGTWGLCIIHKDNPDSLIVARNG---SPLLVGIG-DDSIYVASEPSAFAKYTNE-YISLKDGEI 243 (640)
T ss_pred cCCCHHHHHHHHHHHhhhhceEEEEEeCCCCEEEEEECC---CceEEEEc-CceEEEEechHHHHhhCcE-EEEeCCCeE
Confidence 221 4577899999999999999976 5899999996 99999997 4679999999999988875 667999999
Q ss_pred EEEeCCcEEEEe
Q 026270 192 FSTAVGGLRSFE 203 (241)
Q Consensus 192 ~~~~~~~~~~y~ 203 (241)
+.++.++++.|.
T Consensus 244 ~~i~~~~~~~~~ 255 (640)
T PTZ00295 244 AELSLENVNDLY 255 (640)
T ss_pred EEEECCeEEEEe
Confidence 999888888776
No 34
>KOG0572 consensus Glutamine phosphoribosylpyrophosphate amidotransferase [Nucleotide transport and metabolism]
Probab=99.96 E-value=2.6e-28 Score=218.58 Aligned_cols=198 Identities=17% Similarity=0.265 Sum_probs=151.5
Q ss_pred HHhHcCCCCCcceEEc----------------------------CcEEEEEee-C----CCCCCCCceEee--CCcEEEE
Q 026270 35 DRFLQTNSSAVSVQVG----------------------------DNVTLAYTH-Q----NESPLRQRSFAV--KDEIFCL 79 (241)
Q Consensus 35 ~~l~~RGpd~~~~~~~----------------------------~~~~l~~~~-~----~~~~~~QP~~~~--~~~~~lv 79 (241)
-+|.|||.++.|+-.. ++.+|||+| + ....+.||++.. .+.++++
T Consensus 24 ~aLQHRGQesAGIvts~~~~~~~~~kG~Gmv~dVFte~~l~~L~g~~gIGH~RYsTaG~s~~~n~QPFvv~t~~G~lavA 103 (474)
T KOG0572|consen 24 VALQHRGQESAGIVTSGGRGRLYQIKGMGLVSDVFTEDKLSQLPGSIGIGHTRYSTAGSSALSNVQPFVVNTPHGSLAVA 103 (474)
T ss_pred HHHhhCCccccceEeecCCCceEEEeccchhhhhhcHHHHhhCccceeeeeeecccccccccccccceEeeccCceEEEe
Confidence 5899999988774321 235688988 1 123778999864 4669999
Q ss_pred EeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHH-----hhcCCC---CcHHHHhccccccceEEEEEcCCCEEE
Q 026270 80 FEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKA-----LRDRAP---YPPNHVVGHLSGYFAFIVYDKSTSTLF 145 (241)
Q Consensus 80 ~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~-----~g~~g~---~~i~~~l~~L~G~fa~vi~d~~~~~l~ 145 (241)
|||++.|+++||+++ |+ |.+|+|+++ +++.. ++..++ ..++.+++.++|.||++++-. ++||
T Consensus 104 HNGnLVN~~~Lrr~l~~~g~~l~T~SDSElil--~~~a~~~~~~~~~~~~d~~~ri~~~~~~~~g~Yslv~m~~--d~l~ 179 (474)
T KOG0572|consen 104 HNGNLVNYKSLRRELLEEGVGLNTSSDSELIL--QLIAYAPEDVYRVDAPDWFARIRDVMELLPGAYSLVFMTA--DKLY 179 (474)
T ss_pred ccCcccchHHHHHHHHhcCcccccCCcHHHHH--HHHHhchHhhhcccCccHHHHHHHHHHhcCCceeEEEEEc--cEEE
Confidence 999999999999998 33 888999864 55542 221222 357899999999999999985 6799
Q ss_pred EEEcCCCCccEEEEEeCC--C--EEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEEEEe---CCCC--------CCc
Q 026270 146 VASDQFGKVPLYWGITAD--G--HVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFE---NPKN--------KIT 210 (241)
Q Consensus 146 ~aRD~~G~rPL~y~~~~~--g--~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~~~y~---~~~~--------~~~ 210 (241)
+.|||+|.|||+.|.... + .+++|||.++|....++..+++.||+++.++..+.++-+ .|.. ++.
T Consensus 180 avRDp~G~RPL~iG~r~~~~g~~~~v~aSESc~f~~i~a~y~Rev~PGEiV~i~r~g~~s~~~~~~~~~~~~~~cIFEyv 259 (474)
T KOG0572|consen 180 AVRDPYGNRPLCIGRRSNPDGTEAWVVASESCAFLSIGARYEREVRPGEIVEISRNGVKSVDIMKRPDENRMAFCIFEYV 259 (474)
T ss_pred EEecCCCCccceEeeecCCCCcceEEEEecceeeeecccEEEEeecCceEEEEecCCceeeeeecCCccccccceeeeEE
Confidence 999999999999998532 2 799999999999999999999999999988777755543 3321 133
Q ss_pred cCCCCcceeeCceeEE---ecccccccCc
Q 026270 211 AVPAAEEEIWGATFKL---SSGSFLGINK 236 (241)
Q Consensus 211 ~~~r~ds~i~g~~~~~---~~~~~~~~~~ 236 (241)
||+||||++.|..-++ .-|++|+...
T Consensus 260 YFArpdSi~eG~sVY~~R~~~G~~LA~e~ 288 (474)
T KOG0572|consen 260 YFARPDSIFEGQSVYTVRLQCGEQLATEA 288 (474)
T ss_pred EeccCCceecccchHHHHHHHHhHhhhcC
Confidence 9999999999987654 3455665543
No 35
>cd00352 Gn_AT_II Glutamine amidotransferases class-II (GATase). The glutaminase domain catalyzes an amide nitrogen transfer from glutamine to the appropriate substrate. In this process, glutamine is hydrolyzed to glutamic acid and ammonia. This domain is related to members of the Ntn (N-terminal nucleophile) hydrolase superfamily and is found at the N-terminus of enzymes such as glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). GLMS catalyzes the formation of glucosamine 6-phosphate from fructose 6-phosphate and glutamine in amino sugar synthesis. GPATase catalyzes the first step in purine biosynthesis, an amide transfer from glutamine to PRPP, resulting in phosphoribosylamine, pyrophosphate and glutamate. Asparagine synthetase B synthesizes asparagine from aspartate and glutamine. Beta-LS catalyzes the format
Probab=99.96 E-value=4.3e-28 Score=205.73 Aligned_cols=160 Identities=25% Similarity=0.379 Sum_probs=134.6
Q ss_pred HHHHHHhHcCCCCCcceEEcC---------------------------cEEEEEeeCC-----CCCCCCceEeeCCcEEE
Q 026270 31 TALVDRFLQTNSSAVSVQVGD---------------------------NVTLAYTHQN-----ESPLRQRSFAVKDEIFC 78 (241)
Q Consensus 31 ~~m~~~l~~RGpd~~~~~~~~---------------------------~~~l~~~~~~-----~~~~~QP~~~~~~~~~l 78 (241)
..|+..+.+||||+.++.... ..+|||+|.. ...+.||+....+++++
T Consensus 21 ~~~~~~~~~rg~dg~Gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~H~R~at~g~~~~~n~hPf~~~~~~~~~ 100 (220)
T cd00352 21 LRGLAALEHRGPDGAGIAVYDGDGLFVEKRAGPVSDVALDLLDEPLKSGVALGHVRLATNGLPSEANAQPFRSEDGRIAL 100 (220)
T ss_pred HHHHHhhcccCCccCCeEEECCCceEEEEeccchhhhhhhhhhhccCCCEEEEEeEeeecCCCCCCCCCCcCcCCCCEEE
Confidence 469999999999999987643 5789999821 24788999876678999
Q ss_pred EEeeEEcchhhHHHHhC---C---CCCCchHHHHHHHHHHhhcCCC--CcHHHHhccccccceEEEEEcCCCEEEEEEcC
Q 026270 79 LFEGALDNLGSLRQQYG---L---AKSANEVILVIEAYKALRDRAP--YPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQ 150 (241)
Q Consensus 79 v~nG~I~N~~~L~~~lg---~---~~~d~e~~lil~~~~~~g~~g~--~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~ 150 (241)
+|||+|+|+.+|++++. . ..+|+|+ ++++|.+|++.+. +++.++++.++|.|+|+++|..+++++++||+
T Consensus 101 ~hNG~i~n~~~l~~~l~~~~~~~~~~tDse~--i~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~d~~~~~l~~~rd~ 178 (220)
T cd00352 101 VHNGEIYNYRELREELEARGYRFEGESDSEV--ILHLLERLGREGGLFEAVEDALKRLDGPFAFALWDGKPDRLFAARDR 178 (220)
T ss_pred EECcEEEcHHHHHHHHHHCCCeecCCCHHHH--HHHHHHHHhccCCHHHHHHHHHHhCCccEEEEEEECCCCEEEEEECC
Confidence 99999999999998873 2 5777777 4688998874332 45678999999999999999888999999999
Q ss_pred CCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEE
Q 026270 151 FGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFF 192 (241)
Q Consensus 151 ~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~ 192 (241)
+|.|||||+...++.++||||..++...+.+.+.++|||+++
T Consensus 179 ~G~~pL~~~~~~~~~~~~aSe~~~~~~~~~~~~~~l~~g~~~ 220 (220)
T cd00352 179 FGIRPLYYGITKDGGLVFASEPKALLALPFKGVRRLPPGELL 220 (220)
T ss_pred CCCCCeEEEEeCCCeEEEEecHHHHhhcCcccEEECCCCCCC
Confidence 999999999983368999999999988876679999999864
No 36
>PF13537 GATase_7: Glutamine amidotransferase domain; PDB: 1JGT_A 1M1Z_B 1MB9_B 1MBZ_B 1MC1_A.
Probab=99.94 E-value=6e-27 Score=184.37 Aligned_cols=107 Identities=30% Similarity=0.533 Sum_probs=70.5
Q ss_pred CCCCCCceE-eeCCcEEEEEeeEEcchhhHHHHhC---C---CCCCchHHHHHHHHHH---hhcCCCCcHHHHhcccccc
Q 026270 62 ESPLRQRSF-AVKDEIFCLFEGALDNLGSLRQQYG---L---AKSANEVILVIEAYKA---LRDRAPYPPNHVVGHLSGY 131 (241)
Q Consensus 62 ~~~~~QP~~-~~~~~~~lv~nG~I~N~~~L~~~lg---~---~~~d~e~~lil~~~~~---~g~~g~~~i~~~l~~L~G~ 131 (241)
...+.||+. +.++++++++||+|||+++|+++|. + +.+|+|+ ++++|++ |+ .+++++|+|.
T Consensus 9 ~~~~~QP~~~~~~~~~~l~~nG~i~N~~eL~~~l~~~g~~~~~~~D~e~--i~~~~~~~~~~~-------~~~~~~l~G~ 79 (125)
T PF13537_consen 9 SDEGAQPFVSSEDGELVLVFNGEIYNREELRRELEERGHQFSSDSDSEL--ILHLYEEYREWG-------EDFLKRLDGP 79 (125)
T ss_dssp ----------------EEEEEEEES-HHHHHHTSSSS---S--SSHHHH--HHHHHHH---HG-------GGGGGT--EE
T ss_pred ccccccccccccccCEEEEEEEEEEChHHHHHHhhhcccccCCCCCHHH--HHHHHHHHHHHH-------HHHHHhCCce
Confidence 346789999 5778899999999999999999983 2 4566666 5688887 77 8999999999
Q ss_pred ceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhh
Q 026270 132 FAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKG 177 (241)
Q Consensus 132 fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~ 177 (241)
|||++||+++++++++|||+|+|||||+..+++.++||||+++|.+
T Consensus 80 fa~v~~d~~~~~l~~~rD~~G~rpLyy~~~~g~~~~faSe~~~L~a 125 (125)
T PF13537_consen 80 FAFVIWDKDKKRLFLARDRFGIRPLYYGRTDGNGLAFASEIKALLA 125 (125)
T ss_dssp EEEEEEETTE--EEEEE-TT--S--EEEEETT-EEEEESSHHHHHT
T ss_pred EEEEEEeCCCcEEEEEECCCCCCCeEEEEeCCCEEEEEEcHHHhcC
Confidence 9999999988899999999999999999994359999999999864
No 37
>PLN02981 glucosamine:fructose-6-phosphate aminotransferase
Probab=99.94 E-value=1e-25 Score=221.29 Aligned_cols=171 Identities=16% Similarity=0.254 Sum_probs=136.5
Q ss_pred cchHHHHHHHhHcCCCCCcceEEc------------------------------------------CcEEEEEee---CC
Q 026270 27 KTTSTALVDRFLQTNSSAVSVQVG------------------------------------------DNVTLAYTH---QN 61 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~------------------------------------------~~~~l~~~~---~~ 61 (241)
...+-.-+.+|.|||.|+.|+.+. ++++|||+| .+
T Consensus 20 ~~~l~~gL~~Lq~RG~dsaGia~~~~~~~~~~~~~~~k~~G~~~~l~~~~~~~~~~~~l~~~~~~~g~~~IGH~R~at~g 99 (680)
T PLN02981 20 LEVLFNGLRRLEYRGYDSAGIAIDNDPSLESSSPLVFREEGKIESLVRSVYEEVAETDLNLDLVFENHAGIAHTRWATHG 99 (680)
T ss_pred HHHHHHHHHHHhcCCcccceEEEEcCCcccccceEEEEcCCCHHHHHHHHhhhccccccccccCCCCcEEEEEcccccCC
Confidence 456778899999999999887651 136899998 12
Q ss_pred --CCCCCCceEee-CCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHH----HHHhhcC-C--C--CcHHH
Q 026270 62 --ESPLRQRSFAV-KDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEA----YKALRDR-A--P--YPPNH 123 (241)
Q Consensus 62 --~~~~~QP~~~~-~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~----~~~~g~~-g--~--~~i~~ 123 (241)
...+.||+... .+.++++|||+|+|+.+||++| |+ +.+|+|++ +++ |+.|+.. + . +++.+
T Consensus 100 ~~~~~n~qP~~~~~~~~ialvhNG~I~N~~eLr~~L~~~G~~f~s~tDtEvi--~~li~~~~~~~~~~~~~~~~~~a~~~ 177 (680)
T PLN02981 100 PPAPRNSHPQSSGPGNEFLVVHNGIITNYEVLKETLLRHGFTFESDTDTEVI--PKLAKFVFDKLNEEEGDVTFSQVVME 177 (680)
T ss_pred CCCcCCCCCcccCCCCcEEEEECceEecHHHHHHHHHhCCCeeccCCHHHHH--HHHHHHHHHhcccccCCCCHHHHHHH
Confidence 23678999864 3679999999999999999998 44 77888875 566 4455421 1 1 45678
Q ss_pred HhccccccceEEEEEcC-CCEEEEEEcCCCCccEEEEEeC--C---------------------CEEEEEeChhhhhhhc
Q 026270 124 VVGHLSGYFAFIVYDKS-TSTLFVASDQFGKVPLYWGITA--D---------------------GHVAFADDADLLKGAC 179 (241)
Q Consensus 124 ~l~~L~G~fa~vi~d~~-~~~l~~aRD~~G~rPL~y~~~~--~---------------------g~~~faSe~~aL~~~~ 179 (241)
++++|+|+|||++++.. .++++++||+ |||++|..+ + +.++||||.+||...
T Consensus 178 ~~~~l~G~ya~~i~~~~~~~~i~~~r~~---~PL~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aSe~~al~~~- 253 (680)
T PLN02981 178 VMRQLEGAYALIFKSPHYPNELVACKRG---SPLLLGVKELPEEKNSSAVFTSEGFLTKNRDKPKEFFLASDASAVVEH- 253 (680)
T ss_pred HHHhccCccceEEEecCCCCeEEEEecC---CceEEEecCcccccccccccccccccccccccCCcEEEEeCHHHHHHh-
Confidence 99999999999999966 4899999995 999999972 1 369999999999998
Q ss_pred CCceEEeCCCeEEEEeCCcEEEEe
Q 026270 180 GKSLASFPQGCFFSTAVGGLRSFE 203 (241)
Q Consensus 180 ~~~i~~~ppG~~~~~~~~~~~~y~ 203 (241)
.+.++.++||+++.+++++++.|.
T Consensus 254 ~~~~~~l~~gei~~i~~~~~~~~~ 277 (680)
T PLN02981 254 TKRVLVIEDNEVVHLKDGGVGIYK 277 (680)
T ss_pred cCEEEEECCCeEEEEECCeEEEEe
Confidence 557999999999999888877775
No 38
>PTZ00394 glucosamine-fructose-6-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.4e-24 Score=212.74 Aligned_cols=145 Identities=19% Similarity=0.209 Sum_probs=115.7
Q ss_pred EEEEEee---CCC--CCCCCceEeeCCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHH----HHHhhcCC
Q 026270 53 VTLAYTH---QNE--SPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEA----YKALRDRA 117 (241)
Q Consensus 53 ~~l~~~~---~~~--~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~----~~~~g~~g 117 (241)
.+|||+| .+. ..+.||+.+.+++++++|||+|||+.+||++| |+ +++|+|++ +++ |++||...
T Consensus 99 ~~igH~R~at~g~~~~~n~qP~~~~~~~i~vvhNG~I~N~~eLr~~L~~~g~~f~s~tDtEvi--~~li~~~~~~~g~~~ 176 (670)
T PTZ00394 99 VGIAHTRWATHGGVCERNCHPQQSNNGEFTIVHNGIVTNYMTLKELLKEEGYHFSSDTDTEVI--SVLSEYLYTRKGIHN 176 (670)
T ss_pred EEEEEeeceecCCCCcCCCCCcCCCCCCEEEEECeeEecHHHHHHHHHHcCCEecCCChHHHH--HHHHHHHHHhcCCCC
Confidence 5788988 222 36789998888899999999999999999998 44 78888875 455 44443211
Q ss_pred C-CcHHHHhccccccceEEEEEcC-CCEEEEEEcCCCCccEEEEEeCC--------------------CEEEEEeChhhh
Q 026270 118 P-YPPNHVVGHLSGYFAFIVYDKS-TSTLFVASDQFGKVPLYWGITAD--------------------GHVAFADDADLL 175 (241)
Q Consensus 118 ~-~~i~~~l~~L~G~fa~vi~d~~-~~~l~~aRD~~G~rPL~y~~~~~--------------------g~~~faSe~~aL 175 (241)
. +++.+++++|+|+|||+++... .++|+++||+ +||++|..++ +.++|||+..||
T Consensus 177 ~~~a~~~~~~~l~G~ya~~i~~~~~~~~l~~~Rd~---~PL~iG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aSd~~a~ 253 (670)
T PTZ00394 177 FADLALEVSRMVEGSYALLVKSVYFPGQLAASRKG---SPLMVGIRRTDDRGCVMKLQTYDLTDLSGPLEVFFSSDVNSF 253 (670)
T ss_pred HHHHHHHHHHHccCceEEEEEecCCCCEEEEEEcC---CceEEEeccccccccccccccccccccCCCCcEEEEeChHHH
Confidence 1 4677999999999999998643 4899999997 9999999731 479999999999
Q ss_pred hhhcCCceEEeCCCeEEEEeCCcEEEEe
Q 026270 176 KGACGKSLASFPQGCFFSTAVGGLRSFE 203 (241)
Q Consensus 176 ~~~~~~~i~~~ppG~~~~~~~~~~~~y~ 203 (241)
...+. .+..+++|+++.+++++++-|.
T Consensus 254 ~~~t~-~~~~l~dg~~~~~~~~~~~~~~ 280 (670)
T PTZ00394 254 AEYTR-EVVFLEDGDIAHYCDGALRFYN 280 (670)
T ss_pred HHhhc-eEEEecCCeEEEEECCEEEEEe
Confidence 99986 5899999999999877655444
No 39
>PF13522 GATase_6: Glutamine amidotransferase domain
Probab=99.92 E-value=3.5e-24 Score=170.53 Aligned_cols=120 Identities=26% Similarity=0.415 Sum_probs=101.9
Q ss_pred CCCcce--EEcCcEEEEEeeC----CC-CCCCCceEeeCCcEEEEEeeEEcchhhHHHHhC---C---CCCCchHHHHHH
Q 026270 42 SSAVSV--QVGDNVTLAYTHQ----NE-SPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYG---L---AKSANEVILVIE 108 (241)
Q Consensus 42 pd~~~~--~~~~~~~l~~~~~----~~-~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~lg---~---~~~d~e~~lil~ 108 (241)
||..++ +..+.++|||+|. .. ..+.||+...+++++++|||+|+|+.+|+++++ + +.+|+|++ ++
T Consensus 1 pd~~~~~~~~~~~~~lgH~R~AT~G~~~~~~~hPf~~~~g~~~~~HNG~i~n~~~L~~~l~~~g~~~~~~tDSEii--~~ 78 (133)
T PF13522_consen 1 PDFEGLASWLDGEAALGHTRYATVGSPTEENNHPFSNRDGRIALAHNGNIDNYKELREELGEKGHPFESDTDSEII--AA 78 (133)
T ss_pred CChHHHHHhcCCCEEEEEeecCCCCCCCCcCCCCCcCCCCCEEEEECCeecCHHHHHHHHHHCCCcccCCCHHHHH--HH
Confidence 566666 6677799999992 22 344599966678899999999999999999883 3 57888885 57
Q ss_pred HHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeC
Q 026270 109 AYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADD 171 (241)
Q Consensus 109 ~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe 171 (241)
+++++| .++++.|+|.|++++|+...++++++||+.|.|||||+.. ++.++||||
T Consensus 79 li~~~g-------~~~l~~l~G~~a~~~~~~~~~~l~~~rd~~g~~PL~~~~~-~~~~~~ASE 133 (133)
T PF13522_consen 79 LIHRWG-------EEALERLDGAFAFAVYDKTPNKLFLARDPLGIRPLYYGRD-GDGYVFASE 133 (133)
T ss_pred HHHHHH-------HHHHHHhcCceEEEEEEcCCCEEEEEEcCCCCCCEEEEEc-CCEEEEEeC
Confidence 888888 7899999999999999988899999999999999999998 578999998
No 40
>COG0449 GlmS Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains [Cell envelope biogenesis, outer membrane]
Probab=99.86 E-value=7.5e-21 Score=181.36 Aligned_cols=181 Identities=17% Similarity=0.258 Sum_probs=143.3
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEc---------------------------CcE
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVG---------------------------DNV 53 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~---------------------------~~~ 53 (241)
||||+|-=....+ ....+.+-+++|..||=|+.|+..- +..
T Consensus 1 MCGIvG~i~~~~~------------~~~il~~gL~rLEYRGYDSaGiav~~~~~l~~~k~~Gkv~~l~~~~~~~~~~~~~ 68 (597)
T COG0449 1 MCGIVGYIGFLRE------------AIDILLEGLKRLEYRGYDSAGIAVVGDGSLNVRKQVGKISNLEELLNKEPLIGGV 68 (597)
T ss_pred CCcEEEEEcCCcc------------HHHHHHHHHHHHHccCCCcccEEEEeCCeEEEEEccCCHHHHHhhhcccccCCce
Confidence 9999993211111 2456777899999999998874322 236
Q ss_pred EEEEee----CC-CCCCCCceEeeCCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC-CcH
Q 026270 54 TLAYTH----QN-ESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP-YPP 121 (241)
Q Consensus 54 ~l~~~~----~~-~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~-~~i 121 (241)
+||||| +. ...+++|..+ +++++||||.|.||.+||++| |+ +++|||+ +.|++.++-+.+. +++
T Consensus 69 gIgHTRWATHG~P~~~NAHPh~~--~~~avVHNGIIeN~~eLr~eL~~~G~~F~S~TDTEV--i~hLi~~~~~~~~~~a~ 144 (597)
T COG0449 69 GIAHTRWATHGGPTRANAHPHSD--GEFAVVHNGIIENFAELKEELEAKGYVFKSDTDTEV--IAHLLEEIYDTSLLEAV 144 (597)
T ss_pred eeeeccccCCCCCCcCCCCCCCC--CCEEEEeCchhhCHHHHHHHHHhcCCEEecCCchHH--HHHHHHHHHHhHHHHHH
Confidence 799998 22 2378899865 889999999999999999999 56 7778887 4688876533222 567
Q ss_pred HHHhccccccceEEEEEcCC-CEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEE
Q 026270 122 NHVVGHLSGYFAFIVYDKST-STLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLR 200 (241)
Q Consensus 122 ~~~l~~L~G~fa~vi~d~~~-~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~~ 200 (241)
..++++|+|+||+++.|.+. ++|++||. | .||+.|.. ++..++||+..|+.....+ +..+.+|++.+++.+++.
T Consensus 145 ~~~l~~l~Gsyal~~~~~~~p~~i~~ar~--~-sPL~iG~g-~~e~f~aSD~~a~l~~t~~-~~~l~dgd~~~~~~~~v~ 219 (597)
T COG0449 145 KKVLKRLEGSYALLCTHSDFPDELVAARK--G-SPLVIGVG-EGENFLASDVSALLNFTRR-FVYLEEGDIAKLTTDGVS 219 (597)
T ss_pred HHHHHHhcceeEEEEEecCCCCeEEEEcC--C-CCeEEEec-CCcceEecChhhhhhhhce-EEEeCCCCEEEEECCcEE
Confidence 88999999999999999875 79999998 3 99999998 5789999999999998864 889999999888887776
Q ss_pred EEe
Q 026270 201 SFE 203 (241)
Q Consensus 201 ~y~ 203 (241)
+.
T Consensus 220 -~~ 221 (597)
T COG0449 220 -IN 221 (597)
T ss_pred -Ee
Confidence 44
No 41
>KOG0573 consensus Asparagine synthase [Amino acid transport and metabolism]
Probab=99.71 E-value=1.2e-16 Score=146.54 Aligned_cols=164 Identities=20% Similarity=0.230 Sum_probs=111.8
Q ss_pred CeeeeccCccCCchhhccCCCCCCCCcchHHHHHHHhHcCCCCCcceEEcCc-EEE----EEee-CCCCCCCCceEeeCC
Q 026270 1 MLGVFSSAIVSPPEELVAAGSRTPSPKTTSTALVDRFLQTNSSAVSVQVGDN-VTL----AYTH-QNESPLRQRSFAVKD 74 (241)
Q Consensus 1 m~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~l~~RGpd~~~~~~~~~-~~l----~~~~-~~~~~~~QP~~~~~~ 74 (241)
|||||-+-+...+ +++ .....+|...+..||||.+.-...+. ..+ +++. ...-...||++. ++
T Consensus 1 MCGI~~s~~~~~~--l~~--------~~i~~~l~~~~~~rg~d~~~~v~~~~~~y~~~f~~~vL~lrG~~t~Qpvv~-d~ 69 (520)
T KOG0573|consen 1 MCGIFLSVDKDLA--LNS--------ELISEALGLLIGNRGPDHSSKVCTDGKPYIVLFESSVLSLRGYLTKQPVVE-DD 69 (520)
T ss_pred CceEEEeecCCcc--ccc--------cchhhHHHHHhhccCCCchhhhhhcccceeEEeecceEEEeeeeccCceec-cc
Confidence 9999976544443 322 45567799999999999876322211 111 1111 111356799864 45
Q ss_pred cEEEEEeeEEcchhhHHHHhCCCCCCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCc
Q 026270 75 EIFCLFEGALDNLGSLRQQYGLAKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKV 154 (241)
Q Consensus 75 ~~~lv~nG~I~N~~~L~~~lg~~~~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~r 154 (241)
++++.|||+|||...-. +..|+.. ++..+...++. ..|.+.++.++|+|+|++||.+.++||++||++|+|
T Consensus 70 ~~vfl~NGeIyn~~~s~-----~~~d~~~--l~~~l~~~~e~--~~Il~~i~~~qGp~~~iyY~~~~~~LyfgRD~~GRr 140 (520)
T KOG0573|consen 70 RYVFLFNGEIYNGEKSD-----TLFDTDI--LAEELSNLKES--GDILDIIKSLQGPWAFIYYDVRSDKLYFGRDDIGRR 140 (520)
T ss_pred ceEEEecceeccCCCcc-----ccchHHH--HHHHHhcCCcc--ccHHHHHHhccCCceEEEEEccCcEEEEecccccce
Confidence 58999999999965421 2234444 45666655422 457889999999999999999999999999999999
Q ss_pred cEEEEEeCCCEEEE-EeChhhhhhhcCCceEEeCCC
Q 026270 155 PLYWGITADGHVAF-ADDADLLKGACGKSLASFPQG 189 (241)
Q Consensus 155 PL~y~~~~~g~~~f-aSe~~aL~~~~~~~i~~~ppG 189 (241)
+|.|..++.+..++ +|+-. ..+.|.+|||+
T Consensus 141 SLly~~~~~~f~~~~st~g~-----~~~~i~e~~~~ 171 (520)
T KOG0573|consen 141 SLLYSLDPFNFSLVLSTVGT-----SGKLIYEVPPV 171 (520)
T ss_pred eeeEEeccCceeEEeecccc-----CCccccccCch
Confidence 99999986553333 33322 23347799999
No 42
>cd00713 GltS Glutamine amidotransferases class-II (Gn-AT), glutamate synthase (GltS)-type. GltS is a homodimer that synthesizes L-glutamate from 2-oxoglutarate and L-glutamine, an important step in ammonia assimilation in bacteria, cyanobacteria and plants. The N-terminal glutaminase domain catalyzes the hydrolysis of glutamine to glutamic acid and ammonia, and has a fold similar to that of other glutamine amidotransferases such as glucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), and beta lactam synthetase (beta-LS), as well as the Ntn hydrolase folds of the proteasomal alpha and beta subunits.
Probab=99.68 E-value=7.8e-16 Score=142.47 Aligned_cols=136 Identities=14% Similarity=0.150 Sum_probs=100.0
Q ss_pred cEEEEEeeCCC-----CCCCCceEeeCCcEEEEEeeEEcchhhHHHHhC--------------------C---CCCCchH
Q 026270 52 NVTLAYTHQNE-----SPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYG--------------------L---AKSANEV 103 (241)
Q Consensus 52 ~~~l~~~~~~~-----~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~lg--------------------~---~~~d~e~ 103 (241)
..+|+|+|-.. -..+||+. .++|||||+|+..+++.+. + +.||||+
T Consensus 202 ~~al~H~RfSTNT~p~W~~AqPfr------~laHNGEInT~~gnr~~m~are~~~~s~~~g~~~~~~~pi~~~~~SDS~~ 275 (413)
T cd00713 202 AFALVHSRFSTNTFPSWPLAQPFR------YLAHNGEINTIRGNRNWMRAREGLLKSPLFGEDLKKLKPIINPGGSDSAS 275 (413)
T ss_pred EEEEEEEecCCCCCCCcccCCcce------eEEEcccccCHHHHHHHHHHhhhhhcCccchhhHHhcCCcCCCCCChHHH
Confidence 36788988221 14679974 4899999999988776541 0 3778887
Q ss_pred HHHHHHHHHhhcCCC---CcHH-------------------------HHhccccccceEEEEEcCCCEEEEEEcCCCCcc
Q 026270 104 ILVIEAYKALRDRAP---YPPN-------------------------HVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVP 155 (241)
Q Consensus 104 ~lil~~~~~~g~~g~---~~i~-------------------------~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rP 155 (241)
+ .++++-+-..|. +++. .+++.++|+|++++.|. +.++++|||+|.||
T Consensus 276 l--d~~le~l~~~g~~l~~A~~mliPeaw~~~~~m~~~~r~fYey~~~~me~~dGp~aiv~~dg--~~i~a~rDrnGlRP 351 (413)
T cd00713 276 L--DNVLELLVRSGRSLPEAMMMLIPEAWQNNPTMDPELRAFYEYHSSLMEPWDGPAAIAFTDG--RQVGASLDRNGLRP 351 (413)
T ss_pred H--HHHHHHHHHcCCCHHHHHHHhCChhhccCccCCHHHHHHHHHHHHHhccCCCcEEEEEEeC--CEEEEEeCCCCCcc
Confidence 4 355543211121 2222 56788999999999985 78999999999999
Q ss_pred EEEEEeCCCEEEEEeChhhhhhhcCCceE---EeCCCeEEEEeCCc
Q 026270 156 LYWGITADGHVAFADDADLLKGACGKSLA---SFPQGCFFSTAVGG 198 (241)
Q Consensus 156 L~y~~~~~g~~~faSe~~aL~~~~~~~i~---~~ppG~~~~~~~~~ 198 (241)
|+|+.++++.+++|||..++.. ..+.++ ++.||+++.++.++
T Consensus 352 l~~~~t~d~~~v~ASE~gal~~-~~~~V~~kg~l~PGe~v~id~~~ 396 (413)
T cd00713 352 ARYVITKDGLLIMSSEVGVVDV-PPEKVVEKGRLGPGEMLLVDLEE 396 (413)
T ss_pred eEEEEECCCEEEEEeCCcccCC-CcceeeecCCCCCCeEEEEECCC
Confidence 9999886668999999999965 444565 89999998886543
No 43
>cd01908 YafJ Glutamine amidotransferases class-II (Gn-AT)_YafJ-type. YafJ is a glutamine amidotransferase-like protein of unknown function found in prokaryotes, eukaryotes and archaea. YafJ has a conserved structural fold similar to those of other class II glutamine amidotransferases including lucosamine-fructose 6-phosphate synthase (GLMS or GFAT), glutamine phosphoribosylpyrophosphate (Prpp) amidotransferase (GPATase), asparagine synthetase B (AsnB), beta lactam synthetase (beta-LS) and glutamate synthase (GltS). The YafJ fold is also somwhat similar to the Ntn (N-terminal nucleophile) hydrolase fold of the proteasomal alpha and beta subunits.
Probab=99.64 E-value=2.1e-15 Score=132.41 Aligned_cols=135 Identities=16% Similarity=0.152 Sum_probs=104.0
Q ss_pred cEEEEEeeC---C--CCCCCCceEeeCCcEEEEEeeEEcchhhHHHHh---C---C-CCCCchHHHHHHHHHHhh-cCC-
Q 026270 52 NVTLAYTHQ---N--ESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY---G---L-AKSANEVILVIEAYKALR-DRA- 117 (241)
Q Consensus 52 ~~~l~~~~~---~--~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~l---g---~-~~~d~e~~lil~~~~~~g-~~g- 117 (241)
..+|+|+|. . ...+.||+.. ++++++|||.|.|+++|+..+ + . +.+|+|++ ++++.+.. +.+
T Consensus 81 ~~~l~H~R~At~G~~~~~n~hPf~~--~~~~~~HNG~i~n~~~l~~~l~~~~~~~~~~~tDSE~~--~~li~~~l~~~~~ 156 (257)
T cd01908 81 PLVLAHVRAATVGPVSLENCHPFTR--GRWLFAHNGQLDGFRLLRRRLLRLLPRLPVGTTDSELA--FALLLSRLLERDP 156 (257)
T ss_pred cEEEEEEecCCCCCCccccCCCccc--CCEEEEeCCccCCcchhhHHHHhcCccCCccCCHHHHH--HHHHHHHHHhcCC
Confidence 367899982 1 2477899976 489999999999999999887 2 2 67888875 45554432 111
Q ss_pred ------CCcHHHHhcccc-----ccceEEEEEcCCCEEEEEEcCCCCccEEEEEeC-----------------CCEEEEE
Q 026270 118 ------PYPPNHVVGHLS-----GYFAFIVYDKSTSTLFVASDQFGKVPLYWGITA-----------------DGHVAFA 169 (241)
Q Consensus 118 ------~~~i~~~l~~L~-----G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~-----------------~g~~~fa 169 (241)
.+++.++++.|+ |.|+|++.|. ++|+++||+. .+||||.... ++.++||
T Consensus 157 ~~~~~~~~al~~~~~~l~~~~~~~~~n~~~~dg--~~l~a~r~~~-~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~vva 233 (257)
T cd01908 157 LDPAELLDAILQTLRELAALAPPGRLNLLLSDG--EYLIATRYAS-APSLYYLTRRAPFGCARLLFRSVTTPNDDGVVVA 233 (257)
T ss_pred cchHHHHHHHHHHHHHHHHhCcCeEEEEEEECC--CEEEEEEeCC-CCceEEEeccccccccccccccccCCCCCEEEEE
Confidence 145778889999 6888888885 7899999988 7999999863 3689999
Q ss_pred eChhhhhhhcCCceEEeCCCeEEEEeCC
Q 026270 170 DDADLLKGACGKSLASFPQGCFFSTAVG 197 (241)
Q Consensus 170 Se~~aL~~~~~~~i~~~ppG~~~~~~~~ 197 (241)
||..+... .|+++|||++++++++
T Consensus 234 SE~l~~~~----~w~~v~~ge~~~i~~~ 257 (257)
T cd01908 234 SEPLTDDE----GWTEVPPGELVVVSEG 257 (257)
T ss_pred eCCCCCCC----CceEeCCCEEEEEeCC
Confidence 99887643 5999999999988653
No 44
>TIGR03442 conserved hypothetical protein TIGR03442. Members of this strictly bacterial protein family show similarity to class II glutamine amidotransferases (see Pfam family pfam00310). They are distinguished by appearing in a genome context with, and usually adjacent to or between, members of families TIGR03438 (an uncharacterized methyltransferase) and TIGR03440 (an uncharacterized protein).
Probab=99.63 E-value=4.2e-15 Score=130.25 Aligned_cols=134 Identities=15% Similarity=0.154 Sum_probs=100.4
Q ss_pred EEEEEeeC---C---CCCCCCceEeeCCcEEEEEeeEEcchh-----hHHHHh---C--C--CCCCchHHHHHHHHHHh-
Q 026270 53 VTLAYTHQ---N---ESPLRQRSFAVKDEIFCLFEGALDNLG-----SLRQQY---G--L--AKSANEVILVIEAYKAL- 113 (241)
Q Consensus 53 ~~l~~~~~---~---~~~~~QP~~~~~~~~~lv~nG~I~N~~-----~L~~~l---g--~--~~~d~e~~lil~~~~~~- 113 (241)
.+|+|+|. . ...+.||+.. ++++++|||.|.|++ +|+++| + . +.+|||+++ +++.+.
T Consensus 84 ~~i~HvR~AT~G~~~~~~N~hPf~~--g~~~~aHNG~i~n~~~~~r~~L~~~l~~~~~~~~~g~TDSE~i~--~li~~~~ 159 (251)
T TIGR03442 84 CVLAAVRSATVGMAIDESACAPFSD--GRWLFSHNGFVDNFRQTLYRPLRDRLPDIFYLAIEGSTDSAHLF--ALLLNRL 159 (251)
T ss_pred eEEEEeeeCCCCCCcchhcCCCCCc--CCEEEEeCCccCCchhhhhHHHHhcCChhhccCCCCCCHHHHHH--HHHHHHH
Confidence 56889881 1 1268899974 689999999999997 566655 2 1 678888754 455443
Q ss_pred hcCCC----CcHHHHhcccccc-------ceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCC-
Q 026270 114 RDRAP----YPPNHVVGHLSGY-------FAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGK- 181 (241)
Q Consensus 114 g~~g~----~~i~~~l~~L~G~-------fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~- 181 (241)
.+..+ +++.++++.|.|. |+|++.|. ++|++.||+. ||||+..+ +.++||||. | ...
T Consensus 160 ~~~~~~~~~~ai~~~~~~l~~~~~~~~~~~n~~~sdg--~~l~a~R~~~---~L~~~~~~-~~~vvASEp--l---~~~~ 228 (251)
T TIGR03442 160 LENDPRALEEALAEVLLILFSAAAAPRVRLNLLLTDG--SRLVATRWAD---TLYWLKDP-EGVIVASEP--Y---DDDP 228 (251)
T ss_pred hhcCCchHHHHHHHHHHHHHHHhhCcccceEEEEEcC--CEEEEEEeCC---eEEEEEcC-CEEEEEeCC--c---CCCC
Confidence 22121 3466788888888 99999995 7999999975 99999974 579999998 2 333
Q ss_pred ceEEeCCCeEEEEeCCcEEE
Q 026270 182 SLASFPQGCFFSTAVGGLRS 201 (241)
Q Consensus 182 ~i~~~ppG~~~~~~~~~~~~ 201 (241)
.|+++|||+++++++++++.
T Consensus 229 ~W~~v~pge~v~i~~~~v~~ 248 (251)
T TIGR03442 229 GWQDVPDRHLLSVSEDDVTI 248 (251)
T ss_pred CceEeCCCeEEEEECCcEEE
Confidence 79999999999998776543
No 45
>KOG1268 consensus Glucosamine 6-phosphate synthetases, contain amidotransferase and phosphosugar isomerase domains [Cell wall/membrane/envelope biogenesis]
Probab=99.50 E-value=3.6e-13 Score=125.64 Aligned_cols=145 Identities=19% Similarity=0.266 Sum_probs=100.1
Q ss_pred cEEEEEee-----CCCCCCCCceEee-CCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC-
Q 026270 52 NVTLAYTH-----QNESPLRQRSFAV-KDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP- 118 (241)
Q Consensus 52 ~~~l~~~~-----~~~~~~~QP~~~~-~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~- 118 (241)
++++||+| ...+.+.+|+.+. .+.++++|||.|.||++|+..| |+ +++|||.+ ..++...-|+-+
T Consensus 80 H~gIAHTRWATHGvPs~~NsHP~rSd~~n~FvVVHNGIITNyk~lK~~L~~kG~~FESdTDTEci--aKL~~~~~D~~~~ 157 (670)
T KOG1268|consen 80 HCGIAHTRWATHGVPSEVNCHPHRSDPSNEFVVVHNGIITNFKELKALLEKKGYVFESDTDTECI--AKLYKHIYDTSPE 157 (670)
T ss_pred eeeeeeeehhhcCCCCccCCCCCcCCCCCcEEEEEcCeeccHHHHHHHHHhcCceeecccchHHH--HHHHHHHHhhCCC
Confidence 37899999 2234778998753 4679999999999999999888 54 67777774 345543222222
Q ss_pred -----CcHHHHhccccccceEEEEEcC-CCEEEEEEcCCCCccEEEEEeC------------------------------
Q 026270 119 -----YPPNHVVGHLSGYFAFIVYDKS-TSTLFVASDQFGKVPLYWGITA------------------------------ 162 (241)
Q Consensus 119 -----~~i~~~l~~L~G~fa~vi~d~~-~~~l~~aRD~~G~rPL~y~~~~------------------------------ 162 (241)
.-+..++++|+|+|++++.... .+++.+.|+ | .||..|...
T Consensus 158 ~~~F~~lv~~v~k~lEGaFalvfkS~hfP~e~Va~Rr--g-SPlliGvKs~~kls~d~~~V~y~~~~~~~~~~~~~~d~~ 234 (670)
T KOG1268|consen 158 DLDFHVLVELVLKELEGAFGLLFKSSHFPGEVVAARK--G-SPLLIGVKSKTKLSVDFFPVEYGDTQEVSYLKLNKTDTK 234 (670)
T ss_pred cccHHHHHHHHHHHhhhHHHHHHHhhcCCcceeeecc--C-CcceeeecccccccccceeeeccccceecccccCCcccc
Confidence 1146789999999999987654 589999998 4 677766422
Q ss_pred -------CC--EEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCc--EEEE
Q 026270 163 -------DG--HVAFADDADLLKGACGKSLASFPQGCFFSTAVGG--LRSF 202 (241)
Q Consensus 163 -------~g--~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~--~~~y 202 (241)
+. .|+|||+..++..+..+ +--+..+.+..+.+|+ ++|.
T Consensus 235 ~~~~~~~~~~vEff~aSDasa~IEhT~r-V~flEDddia~v~dG~lsihr~ 284 (670)
T KOG1268|consen 235 ASLHFLAGSPVEFFTASDASALIEHTKR-VLFLEDDDIAHVSDGELTIHRG 284 (670)
T ss_pred cccccccCCceEEEEecCcchhheecce-eEEeccCcEEEEecCceEEEee
Confidence 11 57888888877776654 5556666666665664 4444
No 46
>PF00310 GATase_2: Glutamine amidotransferases class-II; InterPro: IPR000583 A large group of biosynthetic enzymes are able to catalyse the removal of the ammonia group from glutamine and then to transfer this group to a substrate to form a new carbon-nitrogen group. This catalytic activity is known as glutamine amidotransferase (GATase) (2.4.2 from EC) []. The GATase domain exists either as a separate polypeptidic subunit or as part of a larger polypeptide fused in different ways to a synthase domain. On the basis of sequence similarities two classes of GATase domains have been identified [, ], class-I (also known as trpG-type) and class-II (also known as purF-type). Enzymes containing Class-II GATase domains include amido phosphoribosyltransferase (glutamine phosphoribosylpyrophosphate amidotransferase) (2.4.2.14 from EC), which catalyses the first step in purine biosynthesis (gene purF in bacteria, ADE4 in yeast); glucosamine--fructose-6-phosphate aminotransferase (2.6.1.16 from EC), which catalyses the formation of glucosamine 6-phosphate from fructose 6-phosphate and glutamine (gene glmS in Escherichia coli, nodM in Rhizobium, GFA1 in yeast); and asparagine synthetase (glutamine-hydrolizing) (6.3.5.4 from EC), which is responsible for the synthesis of asparagine from aspartate and glutamine. A cysteine is present at the N-terminal extremity of the mature form of all these enzymes. This domain is found in a number of cysteine peptidases belonging to MEROPS peptidase family C44 and their non-peptidase homologs. ; GO: 0008152 metabolic process; PDB: 1OFE_A 1LLW_A 1OFD_A 1LLZ_A 1LM1_A 1GPH_1 1AO0_D 3OOJ_E 1JXA_C 2J6H_B ....
Probab=99.41 E-value=1e-12 Score=120.65 Aligned_cols=114 Identities=22% Similarity=0.225 Sum_probs=77.7
Q ss_pred EcCcEEEEEee-C--C--CCCCCCceEeeCCcEEEEEeeEEcchhhHHHHh---CC---C----------------CCCc
Q 026270 49 VGDNVTLAYTH-Q--N--ESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY---GL---A----------------KSAN 101 (241)
Q Consensus 49 ~~~~~~l~~~~-~--~--~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~l---g~---~----------------~~d~ 101 (241)
+....+|+|+| + . .-..+||+. +++|||||.|+..+++.+ +. + .|||
T Consensus 193 ~~s~~~i~H~RysTnt~p~w~~AqPf~------~laHNGeInt~~~n~~~l~~r~~~~~~~~~~~~~~~~pi~~~~~SDS 266 (361)
T PF00310_consen 193 FKSHFAIGHQRYSTNTFPSWENAQPFR------ALAHNGEINTIRGNRNWLEARGYKLNSPLFGDLKELLPIVNPGGSDS 266 (361)
T ss_dssp EEBSEEEEEEEE-SSSSCSGGGSSSEE------EEEEEEEETTHHHHHHHHHHHCCCBSSTTCGHHHCC-SSS-TTS-HH
T ss_pred ccceEEEEEEecCCCCCCcchhcChHH------HhhhccccccHHHHHHHHHhhcccccCccccchhhcccccCCCCChH
Confidence 44458899999 1 1 126789985 899999999999998876 22 3 6788
Q ss_pred hHHHHHHHHHHhhcCC---------------------C-------CcHHHHhccccccceEEEEEcCCCEEEEEEcCCCC
Q 026270 102 EVILVIEAYKALRDRA---------------------P-------YPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGK 153 (241)
Q Consensus 102 e~~lil~~~~~~g~~g---------------------~-------~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~ 153 (241)
|++ ..+++..-..+ + +.+..+++.++|+|++++.|. +.++++|||.|.
T Consensus 267 ~~l--~~~le~l~~~g~~l~~a~~~l~p~~~~~~~~~~~~~~~~y~~~~~~~~~~dGPaai~~~~g--~~~~a~~Dr~GL 342 (361)
T PF00310_consen 267 EVL--DNLLELLLRRGRSLEEAMMMLIPPAWENDEDMSPEKRAFYEYHASLMEPWDGPAAIIFTDG--NGVGAFLDRNGL 342 (361)
T ss_dssp HHH--HHHHHHHHHTTSSHHHHHHHHSGG--TTSCCSTHHHHHHHHHHHHHHCC--CCEEEEEECS--SEEEEEE-TT--
T ss_pred HHH--HHHHHHHHhcCCCHHHHHHhhCCcccccCccCCHHHHHHHHHHHHhhccCCCceEEEEEeC--CEEEEEECCCCC
Confidence 774 34444322222 0 113467888999999999975 579999999999
Q ss_pred ccEEEEEeCCCEEEEEeCh
Q 026270 154 VPLYWGITADGHVAFADDA 172 (241)
Q Consensus 154 rPL~y~~~~~g~~~faSe~ 172 (241)
||+.|+.++|+.+++|||.
T Consensus 343 RP~~~~~~~d~~~v~aSE~ 361 (361)
T PF00310_consen 343 RPLRYGITEDGLVVLASEA 361 (361)
T ss_dssp S--EEEEETTCEEEEESST
T ss_pred cceEEEEECCCEEEEEeCC
Confidence 9999999976889999984
No 47
>PRK11750 gltB glutamate synthase subunit alpha; Provisional
Probab=99.09 E-value=9.3e-10 Score=114.14 Aligned_cols=71 Identities=14% Similarity=0.143 Sum_probs=62.4
Q ss_pred HhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceE--EeCCCeEEEEeC
Q 026270 124 VVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLA--SFPQGCFFSTAV 196 (241)
Q Consensus 124 ~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~--~~ppG~~~~~~~ 196 (241)
+++-++|+|++++.|. +.+++.|||+|.|||.|+.+.|+.+++|||..++.-...+.++ ++.||+++.++.
T Consensus 332 lmEpwdGpaaiv~~~g--~~i~A~~DrnGlRPlr~~~~~d~~~i~aSE~g~ldi~~~~vvrkg~l~PGemi~id~ 404 (1485)
T PRK11750 332 HMEPWDGPAGIVMTDG--RYAACNLDRNGLRPARYVITKDKLITLASEVGIWDYQPDEVVEKGRVGPGELLVIDT 404 (1485)
T ss_pred hcccCCCCEEEEEEeC--CEEEEecCCCCCccceEEEEcCCEEEEEecceeeecccceeEEecccCCCeEEEEeC
Confidence 4556799999999995 7999999999999999998866789999999999877777777 999999988865
No 48
>PF13230 GATase_4: Glutamine amidotransferases class-II; PDB: 3MDN_D.
Probab=98.86 E-value=2.5e-08 Score=88.49 Aligned_cols=141 Identities=16% Similarity=0.222 Sum_probs=67.6
Q ss_pred EEEEEeeC-----CCCCCCCceEee--CCcEEEEEeeEEcchhhHHHH-hCC-CCCCchHHHHHHHHHHhhcCC---C--
Q 026270 53 VTLAYTHQ-----NESPLRQRSFAV--KDEIFCLFEGALDNLGSLRQQ-YGL-AKSANEVILVIEAYKALRDRA---P-- 118 (241)
Q Consensus 53 ~~l~~~~~-----~~~~~~QP~~~~--~~~~~lv~nG~I~N~~~L~~~-lg~-~~~d~e~~lil~~~~~~g~~g---~-- 118 (241)
..|+|+|. ....+.||+... .++.+++|||.|.+.+.++.. +.. ..+|+|.++. .++....+.+ +
T Consensus 73 ~~laHvR~AT~G~v~~~N~HPF~~~~~g~~w~FaHNG~i~~f~~~~~~~~~~~G~TDSE~~F~-lll~~l~~~~~~~~~~ 151 (271)
T PF13230_consen 73 LFLAHVRAATQGAVSLENCHPFSRELWGRRWLFAHNGTIPGFEDILDDRYQPVGTTDSEHAFC-LLLDQLRDRGPDAPPA 151 (271)
T ss_dssp EEEEEE------------SS-EE----ETTEEEEEEEEETTGGGGHHHHHT--S--HHHHHHH-HHHHTTTTT-HH--HH
T ss_pred EEEEEecccCCCCCCcccCCCceeccCCCcEEEEeCCccccccccCccccccCCCcHHHHHHH-HHHHHHHHhCCccccc
Confidence 56899882 123778999753 357899999999998766522 222 6889998753 2344332222 1
Q ss_pred -----CcHHHHhcccc--ccceEEEEEcCCCEEEEEEcC----CCCccEE-------------EE---EeCCCEEEEEeC
Q 026270 119 -----YPPNHVVGHLS--GYFAFIVYDKSTSTLFVASDQ----FGKVPLY-------------WG---ITADGHVAFADD 171 (241)
Q Consensus 119 -----~~i~~~l~~L~--G~fa~vi~d~~~~~l~~aRD~----~G~rPL~-------------y~---~~~~g~~~faSe 171 (241)
..+.++.+.+. |.++|++.|. +.|++.|+. .-+++.+ .. ...+..++||||
T Consensus 152 ~~~~~~~l~~~~~~~~~~~~~N~~lsDG--~~l~a~~~~~l~~~~r~~p~~~~~l~~~~~~~~~~~~~~~~~~~~vVaSe 229 (271)
T PF13230_consen 152 LEELFEALRELAKEINEYGSLNFLLSDG--ERLFAHRYTSLYYLTRRPPFGKARLFDEDYEVDFSEVTDPDDRAVVVASE 229 (271)
T ss_dssp HHHHHHHHHHHHHS-SSSEEEEEEEE-S--S-EEEEEEESSS----------------------EEEEETTTTEEEEESS
T ss_pred HHHHHHHHHHHHHHhccCeeEEEEEECC--ceEEEEEcCCeeEEeccccccccccccchhhhhhhhccCCCCCEEEEEec
Confidence 12344455554 6788888885 699999982 1122211 00 112357888888
Q ss_pred hhhhhhhcCCceEEeCCCeEEEEeCCcEE
Q 026270 172 ADLLKGACGKSLASFPQGCFFSTAVGGLR 200 (241)
Q Consensus 172 ~~aL~~~~~~~i~~~ppG~~~~~~~~~~~ 200 (241)
.=. ....|.++|+|++++++.|.+.
T Consensus 230 PLt----~~e~W~~vp~g~~l~~~~G~v~ 254 (271)
T PF13230_consen 230 PLT----DDEDWEPVPPGSLLVFRDGEVV 254 (271)
T ss_dssp --------SS--EE--SSEEEE-------
T ss_pred cCC----CCCCeEEcCCCcEEEEeccccc
Confidence 422 1235999999999999877643
No 49
>PF09147 DUF1933: Domain of unknown function (DUF1933); InterPro: IPR015230 This domain is predominantly found in carbapenam synthetase, and is composed of two antiparallel six-stranded beta-sheets that form a sandwich, flanked on each side by two alpha-helices. Their exact function has not, as yet, been determined []. ; PDB: 1Q19_A 1Q15_D.
Probab=98.11 E-value=5.8e-05 Score=62.27 Aligned_cols=109 Identities=19% Similarity=0.260 Sum_probs=73.5
Q ss_pred CcEEEEEeeEEcchhhHHHHhCC------CCCCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEE
Q 026270 74 DEIFCLFEGALDNLGSLRQQYGL------AKSANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVA 147 (241)
Q Consensus 74 ~~~~lv~nG~I~N~~~L~~~lg~------~~~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~a 147 (241)
.+-..-.-|.|||..-|+.-.|+ .-+|.|+ ++.++.++| ..++..-+|.|+|.+=|+ +++|.+.
T Consensus 47 ~~~tayLIGsiyNr~~L~~lag~~eg~a~v~nd~El--L~~~~~~lG-------~~aLsLAEGdfcffiE~k-ng~L~l~ 116 (201)
T PF09147_consen 47 ERGTAYLIGSIYNRRFLRGLAGMWEGHAYVLNDAEL--LYTIFTRLG-------NSALSLAEGDFCFFIEDK-NGELTLI 116 (201)
T ss_dssp TTEEEEEES--S-HHHHHHHHTTT-GGGGG--HHHH--HHHHHHHH--------GGGGGG--SSEEEEEEET-TSEEEEE
T ss_pred cCccEEEEEEeccHHHHHHhhheeeccceeeccHHH--HHHHHHHhh-------hhhhhhhcCceEEEEecC-CCcEEEE
Confidence 34456667999999988876665 3456666 457888888 789999999999999775 6999999
Q ss_pred EcCCCCccEEEEEeCCCEEEEEeChhhhhhh-------------------------cCCceEEeCCCeEEEE
Q 026270 148 SDQFGKVPLYWGITADGHVAFADDADLLKGA-------------------------CGKSLASFPQGCFFST 194 (241)
Q Consensus 148 RD~~G~rPL~y~~~~~g~~~faSe~~aL~~~-------------------------~~~~i~~~ppG~~~~~ 194 (241)
.|+-|..|+|.-.+ +..++...+|-+-.. +.+.+..+.||.+-++
T Consensus 117 Tds~G~~pv~lV~~--~~~WiTn~LK~V~~~eg~~a~df~~E~~v~q~~l~~d~~sPi~na~RlkPGsin~l 186 (201)
T PF09147_consen 117 TDSRGFNPVYLVQS--KFIWITNSLKLVSAVEGEGAFDFMPESLVIQSSLRPDNFSPIKNAQRLKPGSINVL 186 (201)
T ss_dssp E-SSSSS-EEEEES--SSEEEES-HHHHHHHH-TTSS-B--HHHHSS-S---TT--SBTTEEEE-SSEEEEE
T ss_pred ecCCCCceEEEEec--CceEEecceEEEEEeeccccccccchhHHHhhhccCCCcCccccceecCCCceEEE
Confidence 99999999998886 357777776654331 1246889999998655
No 50
>COG0121 Predicted glutamine amidotransferase [General function prediction only]
Probab=97.67 E-value=0.00064 Score=59.76 Aligned_cols=38 Identities=13% Similarity=0.037 Sum_probs=29.0
Q ss_pred EEEEEeeC-----CCCCCCCceEee--CCcEEEEEeeEEcchhhH
Q 026270 53 VTLAYTHQ-----NESPLRQRSFAV--KDEIFCLFEGALDNLGSL 90 (241)
Q Consensus 53 ~~l~~~~~-----~~~~~~QP~~~~--~~~~~lv~nG~I~N~~~L 90 (241)
.+++|+|. ....+.||++.+ .....++|||.|.+++.+
T Consensus 72 ~viaHvR~At~G~vs~~ntHPF~~~~~~~~~~FaHNG~l~~~~~~ 116 (252)
T COG0121 72 LVIAHVRKATQGEVSLSNTHPFTRELWGYIWLFAHNGQLDKFKLL 116 (252)
T ss_pred EEEEEEeccCCCcccccCCCCccccCCccceEEEecCcccCcccc
Confidence 67899992 124778999865 345688999999999873
No 51
>COG0067 GltB Glutamate synthase domain 1 [Amino acid transport and metabolism]
Probab=97.43 E-value=0.0016 Score=60.07 Aligned_cols=135 Identities=16% Similarity=0.146 Sum_probs=88.4
Q ss_pred CcEEEEEeeCCC-----CCCCCceEeeCCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC-
Q 026270 51 DNVTLAYTHQNE-----SPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP- 118 (241)
Q Consensus 51 ~~~~l~~~~~~~-----~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~- 118 (241)
+..+|+|+|-.. -..+||+- .++|||||.++...++.+ +. +..|+|.+ ..++--....+-
T Consensus 202 s~~~l~HsRFSTNT~p~W~~AHPfr------~lvHNGEInT~~gN~nwm~ar~~~~~s~~~~e~~--a~l~p~~~~~~sD 273 (371)
T COG0067 202 SAIALVHTRFSTNTFPSWPLAHPFR------LLVHNGEINTYGGNRNWLEARGYKFESPTDGEVL--AKLLPILMRGGSD 273 (371)
T ss_pred eeEEEEEeccCCCCCCCCCccCcce------eeeecceecccccHHHHHHHhhcccccCccHHHH--HHHHHHhcccCCc
Confidence 346788988211 14568863 469999999887765555 32 67777663 233321111110
Q ss_pred ----CcH----------HHHhccccccceEEEEE-cCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCce
Q 026270 119 ----YPP----------NHVVGHLSGYFAFIVYD-KSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSL 183 (241)
Q Consensus 119 ----~~i----------~~~l~~L~G~fa~vi~d-~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i 183 (241)
+.. ..-...|.|+||++.-. ..++...+.+|+.+.+|.+-|.. +..|.++|+.-|++.-++
T Consensus 274 s~~~dn~lE~l~~~G~~l~~a~~m~~P~aw~~~~~~~~~~~afye~~~~l~epwdGpa-~~~f~dgse~gA~ldrng--- 349 (371)
T COG0067 274 SASLDNALELLLLGGRDLYHAAMLLGPEAWVVGTDMDPEGRAFYEDHSALMEPWDGPA-DIVFTDGSEEGAILDRNG--- 349 (371)
T ss_pred chhhhHHHHHHHhcCcCchhHHHhcCchhhccCCCCCcceEEEEehhhhCCCCccCCc-ceeEEeeeeeeeeeccCC---
Confidence 111 23345788999988654 22468889999999999999987 578999999998876554
Q ss_pred EEeCCCeEEEEeCCcE
Q 026270 184 ASFPQGCFFSTAVGGL 199 (241)
Q Consensus 184 ~~~ppG~~~~~~~~~~ 199 (241)
+.|+.|++.+++.+
T Consensus 350 --Lrp~Ry~~t~d~~v 363 (371)
T COG0067 350 --LRPARYWITKDGEV 363 (371)
T ss_pred --CCcceEEEecCCEE
Confidence 66777777655543
No 52
>KOG0399 consensus Glutamate synthase [Amino acid transport and metabolism]
Probab=92.32 E-value=0.79 Score=48.27 Aligned_cols=71 Identities=17% Similarity=0.120 Sum_probs=50.6
Q ss_pred HhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCC--ceEEeCCCeEEEEeC
Q 026270 124 VVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGK--SLASFPQGCFFSTAV 196 (241)
Q Consensus 124 ~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~--~i~~~ppG~~~~~~~ 196 (241)
.++-.+|+--+.+-|. +.+=+.-||.|.||-=|+.+.|+.+++|||.-.+.-...+ .=..+.||.++..+.
T Consensus 406 ~MEpWDGPALl~FsDG--ry~GA~LDRNGLRP~Ryy~Tsdd~v~~ASEVGvv~i~~~kVv~KgRL~PG~MllVD~ 478 (2142)
T KOG0399|consen 406 QMEPWDGPALLTFSDG--RYCGAILDRNGLRPARYYITSDDRVICASEVGVVPIPPEKVVQKGRLKPGMMLLVDT 478 (2142)
T ss_pred cCCCCCCceEEEecCC--ceeeeeeccCCCcceeeEEecCCEEEEeecccccCCCHHHhhhccCcCCCeEEEEEc
Confidence 4566788766666664 5778888999999998888878899999997554322111 114688999877743
No 53
>PF10736 DUF2527: Protein of unknown function (DUF2627) ; InterPro: IPR019672 This entry represents small proteins with unknown function and appear to be restricted to a family of Enterobacterial proteins. It has a highly conserved sequence. Some proteins are annotated as YobF and may be involved in stress responses in E. coli.
Probab=68.07 E-value=1.6 Score=26.46 Aligned_cols=9 Identities=44% Similarity=0.866 Sum_probs=7.4
Q ss_pred CeeeeccCc
Q 026270 1 MLGVFSSAI 9 (241)
Q Consensus 1 m~gi~~~~~ 9 (241)
|||||++.+
T Consensus 1 M~GIFSKE~ 9 (38)
T PF10736_consen 1 MNGIFSKEV 9 (38)
T ss_pred CcccccHhh
Confidence 999998754
No 54
>COG0067 GltB Glutamate synthase domain 1 [Amino acid transport and metabolism]
Probab=52.28 E-value=17 Score=33.78 Aligned_cols=47 Identities=28% Similarity=0.279 Sum_probs=26.2
Q ss_pred HhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeCh
Q 026270 124 VVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDA 172 (241)
Q Consensus 124 ~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~ 172 (241)
+.+-.+|.=+.++.|. .++-+.||+.|.||-=|..++++.++++||.
T Consensus 323 l~epwdGpa~~~f~dg--se~gA~ldrngLrp~Ry~~t~d~~vv~~se~ 369 (371)
T COG0067 323 LMEPWDGPADIVFTDG--SEEGAILDRNGLRPARYWITKDGEVVVASEA 369 (371)
T ss_pred CCCCccCCcceeEEee--eeeeeeeccCCCCcceEEEecCCEEEEEEec
Confidence 4455555555555554 3555556666666655555545556666553
No 55
>PF04566 RNA_pol_Rpb2_4: RNA polymerase Rpb2, domain 4; InterPro: IPR007646 RNA polymerases catalyse the DNA dependent polymerisation of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial and chloroplast polymerases). Domain 4, is also known as the external 2 domain [].; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 3S17_B 1I6H_B 4A3B_B 3K1F_B 4A3I_B 1TWA_B 3S14_B 3S15_B 2NVX_B 3M3Y_B ....
Probab=47.12 E-value=29 Score=23.82 Aligned_cols=27 Identities=30% Similarity=0.463 Sum_probs=19.8
Q ss_pred ceEEEEEcCCCEEEEEEcCCCC--ccEEEE
Q 026270 132 FAFIVYDKSTSTLFVASDQFGK--VPLYWG 159 (241)
Q Consensus 132 fa~vi~d~~~~~l~~aRD~~G~--rPL~y~ 159 (241)
+.=+.+|...+++++..|. |+ |||+.-
T Consensus 33 ~vsi~~~~~~~ei~I~tD~-GR~~RPL~vV 61 (63)
T PF04566_consen 33 EVSIVYDIREKEIRINTDA-GRLCRPLFVV 61 (63)
T ss_dssp TSEEEEETTTTEEEEE-SS-CEEEEEEEEE
T ss_pred eeEEEEeccCCEEEEEccC-CcccceeEEe
Confidence 3345688888999999995 74 888763
No 56
>PF08973 TM1506: Domain of unknown function (DUF1893); InterPro: IPR015067 This family consist of hypothetical bacterial proteins. ; PDB: 1VK9_A.
Probab=31.84 E-value=21 Score=28.46 Aligned_cols=26 Identities=19% Similarity=0.410 Sum_probs=18.1
Q ss_pred cccceEEEEEcCCCEEEEEEcCCCCccEE
Q 026270 129 SGYFAFIVYDKSTSTLFVASDQFGKVPLY 157 (241)
Q Consensus 129 ~G~fa~vi~d~~~~~l~~aRD~~G~rPL~ 157 (241)
+|.|++++++. ++++-..+ -|++|||
T Consensus 10 e~~~S~Vv~~~--~~i~t~~~-rGv~pL~ 35 (134)
T PF08973_consen 10 EENYSCVVLKD--GEIRTSDG-RGVKPLY 35 (134)
T ss_dssp HTT-SEEEESS--SEEEEE---STTHHHH
T ss_pred hCCceEEEEeC--CEEEEeCC-CChHHHH
Confidence 46799999974 56666666 5999998
No 57
>TIGR03823 FliZ flagellar regulatory protein FliZ. FliZ is involved in the regulation of flagellar assembly and possibly also the down-regulation of the motile phenotype. FliZ interacts with the flagellar translational activator FlhCD complex.
Probab=31.41 E-value=33 Score=28.07 Aligned_cols=20 Identities=30% Similarity=0.428 Sum_probs=17.0
Q ss_pred CcEEEEEeeEEcchhhHHHH
Q 026270 74 DEIFCLFEGALDNLGSLRQQ 93 (241)
Q Consensus 74 ~~~~lv~nG~I~N~~~L~~~ 93 (241)
+++.+|+||+|-|.+.+...
T Consensus 33 DRisLV~~gqiinK~~Ia~m 52 (168)
T TIGR03823 33 DRISLVFRGQIINKESISRM 52 (168)
T ss_pred hheeeeecceeecHHHHHHH
Confidence 57999999999999887643
No 58
>PRK11582 flagella biosynthesis protein FliZ; Provisional
Probab=31.25 E-value=34 Score=28.04 Aligned_cols=20 Identities=25% Similarity=0.358 Sum_probs=16.9
Q ss_pred CcEEEEEeeEEcchhhHHHH
Q 026270 74 DEIFCLFEGALDNLGSLRQQ 93 (241)
Q Consensus 74 ~~~~lv~nG~I~N~~~L~~~ 93 (241)
+++.+|+||+|-|.+.+...
T Consensus 33 DRisLV~~gqiinK~~Ia~m 52 (169)
T PRK11582 33 DRITLVFRGQIINKIAISRM 52 (169)
T ss_pred hheeeeecceeecHHHHHHH
Confidence 57999999999999887643
No 59
>PF00310 GATase_2: Glutamine amidotransferases class-II; InterPro: IPR000583 A large group of biosynthetic enzymes are able to catalyse the removal of the ammonia group from glutamine and then to transfer this group to a substrate to form a new carbon-nitrogen group. This catalytic activity is known as glutamine amidotransferase (GATase) (2.4.2 from EC) []. The GATase domain exists either as a separate polypeptidic subunit or as part of a larger polypeptide fused in different ways to a synthase domain. On the basis of sequence similarities two classes of GATase domains have been identified [, ], class-I (also known as trpG-type) and class-II (also known as purF-type). Enzymes containing Class-II GATase domains include amido phosphoribosyltransferase (glutamine phosphoribosylpyrophosphate amidotransferase) (2.4.2.14 from EC), which catalyses the first step in purine biosynthesis (gene purF in bacteria, ADE4 in yeast); glucosamine--fructose-6-phosphate aminotransferase (2.6.1.16 from EC), which catalyses the formation of glucosamine 6-phosphate from fructose 6-phosphate and glutamine (gene glmS in Escherichia coli, nodM in Rhizobium, GFA1 in yeast); and asparagine synthetase (glutamine-hydrolizing) (6.3.5.4 from EC), which is responsible for the synthesis of asparagine from aspartate and glutamine. A cysteine is present at the N-terminal extremity of the mature form of all these enzymes. This domain is found in a number of cysteine peptidases belonging to MEROPS peptidase family C44 and their non-peptidase homologs. ; GO: 0008152 metabolic process; PDB: 1OFE_A 1LLW_A 1OFD_A 1LLZ_A 1LM1_A 1GPH_1 1AO0_D 3OOJ_E 1JXA_C 2J6H_B ....
Probab=27.66 E-value=36 Score=31.53 Aligned_cols=16 Identities=6% Similarity=0.096 Sum_probs=13.5
Q ss_pred cchHHHHHHHhHcCCC
Q 026270 27 KTTSTALVDRFLQTNS 42 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGp 42 (241)
-....+++..|.|||.
T Consensus 18 v~~~l~~L~~m~HRG~ 33 (361)
T PF00310_consen 18 VDDALEALKRMEHRGG 33 (361)
T ss_dssp HHHHHHHHHHHGGGST
T ss_pred HHHHHHHHhcccccCC
Confidence 3567789999999998
No 60
>COG4911 Uncharacterized conserved protein [Function unknown]
Probab=26.20 E-value=67 Score=24.66 Aligned_cols=25 Identities=12% Similarity=0.190 Sum_probs=20.7
Q ss_pred cHHHHhccccccceEEEEEcCCCEE
Q 026270 120 PPNHVVGHLSGYFAFIVYDKSTSTL 144 (241)
Q Consensus 120 ~i~~~l~~L~G~fa~vi~d~~~~~l 144 (241)
.+.++....+|.|+|..|--++..+
T Consensus 73 glVDFpa~~Ng~~~~lCWK~DE~~i 97 (123)
T COG4911 73 GLVDFPAIINGKPAFLCWKIDENDI 97 (123)
T ss_pred ccccchhhhCCceEEEEEecCCcce
Confidence 3578999999999999998766554
No 61
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=21.89 E-value=2e+02 Score=25.80 Aligned_cols=27 Identities=26% Similarity=0.311 Sum_probs=21.1
Q ss_pred CceEEeCCCeEEEEeCCcEEEEeCCCC
Q 026270 181 KSLASFPQGCFFSTAVGGLRSFENPKN 207 (241)
Q Consensus 181 ~~i~~~ppG~~~~~~~~~~~~y~~~~~ 207 (241)
+..+.-+.|+|+++..|.-..||.+..
T Consensus 188 tSlEvs~dG~ilTia~gssV~Fwdaks 214 (334)
T KOG0278|consen 188 TSLEVSQDGRILTIAYGSSVKFWDAKS 214 (334)
T ss_pred cceeeccCCCEEEEecCceeEEecccc
Confidence 445667889999998888888888763
No 62
>COG4315 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=20.33 E-value=92 Score=24.44 Aligned_cols=32 Identities=31% Similarity=0.409 Sum_probs=23.8
Q ss_pred hccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEe
Q 026270 125 VGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGIT 161 (241)
Q Consensus 125 l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~ 161 (241)
-.+-+|.|+++.-+ .++.--+.| | +|||+...
T Consensus 86 ~dka~Gdysii~Rk--DGt~QWa~d--G-kPLY~w~k 117 (138)
T COG4315 86 ADKASGDYSIIARK--DGTKQWAYD--G-KPLYLWVK 117 (138)
T ss_pred ccccCCCeeeEEec--CchhhhhcC--C-ceeEEEee
Confidence 45678999988765 456656666 5 99999875
Done!