Query 026270
Match_columns 241
No_of_seqs 199 out of 1994
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 09:35:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026270.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026270hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ct9_A Asparagine synthetase B 100.0 1.7E-36 5.7E-41 290.2 17.1 172 27-208 17-196 (553)
2 1ao0_A Glutamine phosphoribosy 100.0 3.8E-35 1.3E-39 275.2 18.7 191 27-222 13-253 (459)
3 1xff_A D-fructose-6-, glucosam 100.0 6.5E-33 2.2E-37 239.6 20.0 170 27-205 13-225 (240)
4 1ecf_A Glutamine phosphoribosy 100.0 1.8E-31 6.1E-36 252.9 22.3 194 27-223 13-270 (504)
5 2bpl_A Glucosamine--fructose-6 100.0 4.4E-29 1.5E-33 241.3 18.7 169 27-204 13-224 (608)
6 1jgt_A Beta-lactam synthetase; 100.0 1.3E-28 4.4E-33 233.8 14.2 148 38-208 40-213 (513)
7 1q15_A CARA; CMPR, (2S,5S)-5-c 99.9 1.8E-26 6.2E-31 218.6 7.8 144 52-208 27-208 (503)
8 3mdn_A Glutamine aminotransfer 99.9 2.6E-24 9E-29 189.3 14.2 143 53-204 83-257 (274)
9 1te5_A Conserved hypothetical 99.8 7.2E-22 2.4E-26 172.2 3.8 139 53-200 73-252 (257)
10 1ea0_A Glutamate synthase [NAD 99.6 2.1E-15 7.2E-20 155.1 9.3 138 52-197 203-396 (1479)
11 1ofd_A Ferredoxin-dependent gl 99.5 2.9E-14 1E-18 147.0 11.7 138 52-197 199-395 (1520)
12 1vk9_A Conserved hypothetical 34.7 11 0.00038 29.4 0.8 26 129-157 27-52 (151)
No 1
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=100.00 E-value=1.7e-36 Score=290.25 Aligned_cols=172 Identities=23% Similarity=0.428 Sum_probs=151.4
Q ss_pred cchHHHHHHHhHcCCCCCcceEEcCcEEEEEeeC---CCCCCCCceEeeCCcEEEEEeeEEcchhhHHHHhC----C-CC
Q 026270 27 KTTSTALVDRFLQTNSSAVSVQVGDNVTLAYTHQ---NESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQYG----L-AK 98 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~~~~~l~~~~~---~~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~lg----~-~~ 98 (241)
...+.+|++.|.|||||+.+++..++++|||+|. +...+.||+.+.+++++++|||+|||+.+|+++|. . +.
T Consensus 17 ~~~~~~m~~~l~hRGpD~~G~~~~~~~~lgh~Rlsi~~~~~~~QP~~~~~~~~~lv~NGeIyN~~eLr~~L~~~~~f~s~ 96 (553)
T 1ct9_A 17 RKKALELSRLMRHRGPDWSGIYASDNAILAHERLSIVDVNAGAQPLYNQQKTHVLAVNGEIYNHQALRAEYGDRYQFQTG 96 (553)
T ss_dssp HHHHHHHHHTTGGGCBTEEEEEECSSEEEEEEECCCSCTTTCCSSEECTTSCEEEEEEEEETTHHHHHHHHTTTSCCCSC
T ss_pred HHHHHHHHHHHhccCCCcccEEEECCEEEEEEeeeeeCCCCCCCCeEeCCCCEEEEEEEEEECHHHHHHHHhccCccCCC
Confidence 3557789999999999999999998899999993 22368899998788899999999999999999984 2 78
Q ss_pred CCchHHHHHHHHHHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhh
Q 026270 99 SANEVILVIEAYKALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGA 178 (241)
Q Consensus 99 ~d~e~~lil~~~~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~ 178 (241)
+|+|++ +++|++|| .+++++|+|+|||++||.++++|+++||++|+|||||+...++.++||||.++|...
T Consensus 97 sDtEvi--l~l~~~~g-------~~~l~~l~G~fa~~i~d~~~~~l~~aRD~~G~~PLy~~~~~~~~~~faSe~~al~~~ 167 (553)
T 1ct9_A 97 SDCEVI--LALYQEKG-------PEFLDDLQGMFAFALYDSEKDAYLIGRDHLGIIPLYMGYDEHGQLYVASEMKALVPV 167 (553)
T ss_dssp CTTHHH--HHHHHHHT-------TTTGGGCCEEEEEEEEETTTTEEEEEECTTCCSCCEEEECTTCCEEEESSGGGTTTT
T ss_pred CcHHHH--HHHHHHHH-------HHHHHhCCccEEEEEEECCCCEEEEEECCCCCCCeEEEEecCCEEEEeechHHHHhh
Confidence 889985 69999998 789999999999999999889999999999999999999535689999999999876
Q ss_pred cCCceEEeCCCeEEEEeCCcEEEEeCCCCC
Q 026270 179 CGKSLASFPQGCFFSTAVGGLRSFENPKNK 208 (241)
Q Consensus 179 ~~~~i~~~ppG~~~~~~~~~~~~y~~~~~~ 208 (241)
+ +.|++||||+++.+++|++++||.+.+.
T Consensus 168 ~-~~i~~l~pG~~~~~~~g~~~~yw~~~~~ 196 (553)
T 1ct9_A 168 C-RTIKEFPAGSYLWSQDGEIRSYYHRDWF 196 (553)
T ss_dssp C-SEEEECCTTEEEETTTCSEEECCCCGGG
T ss_pred c-CCEEEECCCeEEEEcCCcEEEeecCCcc
Confidence 5 4699999999998877779999998643
No 2
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=100.00 E-value=3.8e-35 Score=275.24 Aligned_cols=191 Identities=16% Similarity=0.166 Sum_probs=155.9
Q ss_pred cchHHHHHHHhHcCCCCCcceEEc---------------------------CcEEEEEeeCC---C--CCCCCceEe---
Q 026270 27 KTTSTALVDRFLQTNSSAVSVQVG---------------------------DNVTLAYTHQN---E--SPLRQRSFA--- 71 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~---------------------------~~~~l~~~~~~---~--~~~~QP~~~--- 71 (241)
...+..|+..|.|||||+.+++.. ++.+|||+|.. . ..+.||+..
T Consensus 13 ~~~~~~~l~~L~hRG~D~~Gi~~~~~~~~~~~k~~g~v~~~~~~~~l~~l~g~~~igH~R~at~g~~~~~n~qP~~~~~~ 92 (459)
T 1ao0_A 13 PQITYYGLHSLQHRGQEGAGIVATDGEKLTAHKGQGLITEVFQNGELSKVKGKGAIGHVRYATAGGGGYENVQPLLFRSQ 92 (459)
T ss_dssp HHHHHHHHHHTGGGCCSEEEEEEECSSCEEEEEEESCHHHHTTSSCTTTCCBSEEEEEEECCC----CGGGSSSEEEBCT
T ss_pred HHHHHHHHHHHHhcCCCcCCEEEEeCCeEEEEecCCcHhhhcchhhhhccCCCEEEEEEecCCCCCCCccCCCCceeccC
Confidence 345668999999999999998763 34789999932 1 257899987
Q ss_pred eCCcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC-CcHHHHhccccccceEEEEEcCCCEE
Q 026270 72 VKDEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP-YPPNHVVGHLSGYFAFIVYDKSTSTL 144 (241)
Q Consensus 72 ~~~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~-~~i~~~l~~L~G~fa~vi~d~~~~~l 144 (241)
.+++++++|||+|+|+.+|+++| |+ +.+|||+ ++++|.+|++... +++.+++++|+|+|||++|| .++|
T Consensus 93 ~~g~~~l~hNG~I~N~~~Lr~~L~~~g~~f~~~sDsEv--i~~l~~~~~~~~~~~a~~~~~~~l~G~fa~~i~d--~~~l 168 (459)
T 1ao0_A 93 NNGSLALAHNGNLVNATQLKQQLENQGSIFQTSSDTEV--LAHLIKRSGHFTLKDQIKNSLSMLKGAYAFLIMT--ETEM 168 (459)
T ss_dssp TTCCEEEEEEEEETTHHHHHHHHHHTTCCCCSSCHHHH--HHHHHHTCCCSSHHHHHHHHHTTCCEEEEEEEEC--SSEE
T ss_pred CCCcEEEEEEEEecCHHHHHHHHHhcCCcCCCCCHHHH--HHHHHHHhccCCHHHHHHHHHHhhccceEEEEEe--CCEE
Confidence 45789999999999999999988 44 6777777 4689998763221 34678999999999999999 4799
Q ss_pred EEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEE--EEeCCCCC------CccCCCCc
Q 026270 145 FVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLR--SFENPKNK------ITAVPAAE 216 (241)
Q Consensus 145 ~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~~--~y~~~~~~------~~~~~r~d 216 (241)
+++||++|+|||||+.. ++.++||||.++|.....+.|+++|||++++++.++++ +||.+... ..|++|||
T Consensus 169 ~~~RD~~G~rPL~~~~~-~~~~~~ASE~~al~~~~~~~i~~l~pG~~~~i~~~~~~~~~~~~~~~~~~c~feyiyfarp~ 247 (459)
T 1ao0_A 169 IVALDPNGLRPLSIGMM-GDAYVVASETCAFDVVGATYLREVEPGEMLIINDEGMKSERFSMNINRSICSMEYIYFSRPD 247 (459)
T ss_dssp EEEECTTCCSCCEEEEE-TTEEEEESSTHHHHHHTCEEEEECCTTEEEEEETTEEEEEESCSSCCCCEEHHHHHTTSCTT
T ss_pred EEEECCCCCCCeEEEec-CCEEEEEECchHHhcCCCceEEEECCCEEEEEECCceEEEecCCCccccccceeeeeccCCc
Confidence 99999999999999998 57899999999999876678999999999999887754 56765432 33899999
Q ss_pred ceeeCc
Q 026270 217 EEIWGA 222 (241)
Q Consensus 217 s~i~g~ 222 (241)
|.+.+.
T Consensus 248 s~~~~~ 253 (459)
T 1ao0_A 248 SNIDGI 253 (459)
T ss_dssp CEETTE
T ss_pred chhccH
Confidence 987664
No 3
>1xff_A D-fructose-6-, glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; complex (transferase/inhibitor), glutamine amidotransferase; HET: GLU; 1.80A {Escherichia coli} SCOP: d.153.1.1 PDB: 1xfg_A*
Probab=100.00 E-value=6.5e-33 Score=239.57 Aligned_cols=170 Identities=16% Similarity=0.208 Sum_probs=141.8
Q ss_pred cchHHHHHHHhHcCCCCCcceE-Ec---------------------------CcEEEEEeeC---C--CCCCCCceEeeC
Q 026270 27 KTTSTALVDRFLQTNSSAVSVQ-VG---------------------------DNVTLAYTHQ---N--ESPLRQRSFAVK 73 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~-~~---------------------------~~~~l~~~~~---~--~~~~~QP~~~~~ 73 (241)
...+..|++.|.|||||+.+++ .. +..+|||+|. + ...+.||+..
T Consensus 13 ~~~l~~~l~~l~~RG~D~~Gi~~~~~~~~~~~~k~~g~~~~~~~~~~~~~~~~~~~igH~R~at~g~~~~~n~qP~~~-- 90 (240)
T 1xff_A 13 AEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVS-- 90 (240)
T ss_dssp HHHHHHHHHHHGGGCCSEEEEEEECTTCCEEEEEEESCHHHHHHHHHHSCCCCSEEEEEEECCSSSCSSTTTSSCEEE--
T ss_pred HHHHHHHHHHHHhcCCCcCCEEEEecCCcEEEEEcCCcHHHHHhhhhcccCCccEEEEEEeccCCCCCCcccCCCccc--
Confidence 3567789999999999999998 62 4589999992 1 2367899986
Q ss_pred CcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC---CcHHHHhccccccceEEEEEcC-CCE
Q 026270 74 DEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP---YPPNHVVGHLSGYFAFIVYDKS-TST 143 (241)
Q Consensus 74 ~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~---~~i~~~l~~L~G~fa~vi~d~~-~~~ 143 (241)
++++++|||+|||+.+|+++| |+ +.+|||++ +++|++|+..+. +++.+++++|+|+|||++||.+ .++
T Consensus 91 ~~~~l~hNG~I~N~~~lr~~L~~~g~~f~~~sDsEvi--~~l~~~~~~~g~~~~~ai~~~~~~l~G~fa~~i~d~~~~~~ 168 (240)
T 1xff_A 91 EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEVI--AHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDT 168 (240)
T ss_dssp TTEEEEEEEEETTHHHHHHHHHHTTCCCCSCCSHHHH--HHHHHHHHHTSSCHHHHHHHHGGGCCEEEEEEEEETTCTTC
T ss_pred CCEEEEEEEEECCHHHHHHHHHhCCCCCCCCCHHHHH--HHHHHHHHhcCCCHHHHHHHHHHhcccceEEEEEecCCCCE
Confidence 789999999999999999988 44 67888885 688988864332 3456899999999999999975 689
Q ss_pred EEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEEEEeCC
Q 026270 144 LFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFENP 205 (241)
Q Consensus 144 l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~~~y~~~ 205 (241)
|+++||+ |||||+.. ++.++||||.+||...+. .+.+||||++++++.++++.|..+
T Consensus 169 l~~~Rd~---~PL~~~~~-~~~~~~aSE~~al~~~~~-~~~~l~pG~~~~i~~~~~~~~~~~ 225 (240)
T 1xff_A 169 LLAARSG---SPLVIGLG-MGENFIASDQLALLPVTR-RFIFLEEGDIAEITRRSVNIFDKT 225 (240)
T ss_dssp EEEEEEB---SCCEEEEC-SSCEEEESSGGGTTTTCS-EEEECCTTCEEEECSSCEEEECTT
T ss_pred EEEEECC---CceEEEEe-CCEEEEEECHHHHHhhCC-eEEEECCCEEEEEECCeEEEEeCC
Confidence 9999997 99999997 567999999999988876 489999999999988887777653
No 4
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.98 E-value=1.8e-31 Score=252.92 Aligned_cols=194 Identities=14% Similarity=0.111 Sum_probs=151.8
Q ss_pred cchHHHHHHHhHcCCCCCcceEEc----------------------------CcEEEEEeeC---C--CCCCCCceEeeC
Q 026270 27 KTTSTALVDRFLQTNSSAVSVQVG----------------------------DNVTLAYTHQ---N--ESPLRQRSFAVK 73 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~----------------------------~~~~l~~~~~---~--~~~~~QP~~~~~ 73 (241)
...+..|+..|.|||||+.+++.. ++.+|||+|. + ...+.||+....
T Consensus 13 ~~~l~~~l~~LqhRG~D~aGi~~~~~~~~~~~~k~~g~v~~vf~~~~~~~l~g~~~igH~R~sT~G~~~~~n~QP~~~~~ 92 (504)
T 1ecf_A 13 NQSIYDALTVLQHRGQDAAGIITIDANNCFRLRKANGLVSDVFEARHMQRLQGNMGIGHVRYPTAGSSSASEAQPFYVNS 92 (504)
T ss_dssp HHHHHHHHHHTGGGCCSEEEEEEECTTSCEEEEEEESCHHHHCCHHHHHHCCSSEEEEEEECCBTTBCTTSCCSCEEECS
T ss_pred HHHHHHHHHHHHhcCCCcceEEEEcCCCcEEEEecCCchhhhcCccccccCCCCEEEEEEccCcCCCCCccccCCeEecc
Confidence 346778999999999999998754 2478999992 1 236899998643
Q ss_pred -CcEEEEEeeEEcchhhHHHHh---C-C---CCCCchHHHHHHHHHHhhcC-CC---------CcHHHHhccccccceEE
Q 026270 74 -DEIFCLFEGALDNLGSLRQQY---G-L---AKSANEVILVIEAYKALRDR-AP---------YPPNHVVGHLSGYFAFI 135 (241)
Q Consensus 74 -~~~~lv~nG~I~N~~~L~~~l---g-~---~~~d~e~~lil~~~~~~g~~-g~---------~~i~~~l~~L~G~fa~v 135 (241)
.+++++|||+|+|+.+|+++| + . +.+|||++ +++|.++.+. |. +++.+++++|+|+|||+
T Consensus 93 ~~~~~l~hNG~i~N~~eLr~~L~~~g~~~f~s~sDsEvi--~~l~~~~~~~~g~~~~~~~~~~~a~~~~~~~l~G~fa~v 170 (504)
T 1ecf_A 93 PYGITLAHNGNLTNAHELRKKLFEEKRRHINTTSDSEIL--LNIFASELDNFRHYPLEADNIFAAIAATNRLIRGAYACV 170 (504)
T ss_dssp SSCEEEEEEEEETTHHHHHHHHHHHHCCCCCSSCHHHHH--HHHHHHHHTTCCSSSCCHHHHHHHHHHHHHHCCEEEEEE
T ss_pred CCCEEEEEeeeecCHHHHHHHHHhhCCCCCCCCCHHHHH--HHHHHHHHHhccccccccccHHHHHHHhhhhcCccceEE
Confidence 569999999999999999987 2 2 67788874 6888876321 11 23567899999999999
Q ss_pred EEEcCCCEEEEEEcCCCCccEEEEEeC--C--CEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCc-EEEE--e-CCCC
Q 026270 136 VYDKSTSTLFVASDQFGKVPLYWGITA--D--GHVAFADDADLLKGACGKSLASFPQGCFFSTAVGG-LRSF--E-NPKN 207 (241)
Q Consensus 136 i~d~~~~~l~~aRD~~G~rPL~y~~~~--~--g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~-~~~y--~-~~~~ 207 (241)
+|+. .++|+++|||+|+|||||+..+ + +.++||||.+||...+.+.|++|+||++++++.++ +.+. . .+.+
T Consensus 171 ~~~~-~~~l~a~RD~~GirPL~~g~~~~~~g~~~~~~ASE~~al~~~~~~~v~~l~PGe~v~i~~~g~~~~~~~~~~~~~ 249 (504)
T 1ecf_A 171 AMII-GHGMVAFRDPNGIRPLVLGKRDIDENRTEYMVASESVALDTLGFDFLRDVAPGEAIYITEEGQLFTRQCADNPVS 249 (504)
T ss_dssp EEET-TTEEEEEECTTCCSCCEEEEEECSSSCEEEEEESSTHHHHHHTCEEEEECCTTEEEEEETTCCEEEEECSSSCCC
T ss_pred EEEc-CCeEEEEECCCCCCceEEeecccCCCceEEEEEeCchHhhccCccEEEECCCCeEEEEeCCCceecceecCCCCC
Confidence 9985 3589999999999999999972 3 37999999999998877789999999999887665 4432 2 2233
Q ss_pred CCc-----cCCCCcceeeCce
Q 026270 208 KIT-----AVPAAEEEIWGAT 223 (241)
Q Consensus 208 ~~~-----~~~r~ds~i~g~~ 223 (241)
+.. |++||||.|.+.+
T Consensus 250 ~~c~fe~iYfarP~s~i~~~~ 270 (504)
T 1ecf_A 250 NPCLFEYVYFARPDSFIDKIS 270 (504)
T ss_dssp CCBHHHHHTTSCTTCEETTEE
T ss_pred CccEEEEehhcChHHHhhhcc
Confidence 322 8899999998873
No 5
>2bpl_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; amidotransferase, ammonia channeling, glucosamine 6- phosphate synthase; HET: F6R; 2.05A {Escherichia coli} SCOP: c.80.1.1 d.153.1.1 PDB: 1jxa_A* 2j6h_A* 2vf4_X 2vf5_X* 3ooj_A*
Probab=99.96 E-value=4.4e-29 Score=241.26 Aligned_cols=169 Identities=16% Similarity=0.200 Sum_probs=140.9
Q ss_pred cchHHHHHHHhHcCCCCCcceEEc----------------------------CcEEEEEeeC---C--CCCCCCceEeeC
Q 026270 27 KTTSTALVDRFLQTNSSAVSVQVG----------------------------DNVTLAYTHQ---N--ESPLRQRSFAVK 73 (241)
Q Consensus 27 ~~~~~~m~~~l~~RGpd~~~~~~~----------------------------~~~~l~~~~~---~--~~~~~QP~~~~~ 73 (241)
...+..|++.|.|||||+.|++.. +..+|||+|. + ...+.||+.+
T Consensus 13 ~~~l~~~l~~l~~RG~D~~Gi~~~~~~~~~~~~k~~g~~~~l~~~l~~~~~~~~~~igH~R~at~g~~~~~n~qP~~~-- 90 (608)
T 2bpl_A 13 AEILLEGLRRLEYRGYDSAGLAVVDAEGHMTRLRRLGKVQMLAQAAEEHPLHGGTGIAHTRWATHGEPSEVNAHPHVS-- 90 (608)
T ss_dssp HHHHHHHHHHHGGGCCSEEEEEEECTTCCEEEEEEESSHHHHHHHHHHSCCCCSEEEEEEECCCSSSCCGGGCSCEEE--
T ss_pred HHHHHHHHHHHHhcCCCcCceEEEecCCcEEEEeCCCcHHHHHHHhhccCCCCCEEEEEEccCCCCCCCccCCCCccC--
Confidence 456788999999999999998753 3478999992 2 1367899987
Q ss_pred CcEEEEEeeEEcchhhHHHHh---CC---CCCCchHHHHHHHHHHhhcCCC---CcHHHHhccccccceEEEEEcCC-CE
Q 026270 74 DEIFCLFEGALDNLGSLRQQY---GL---AKSANEVILVIEAYKALRDRAP---YPPNHVVGHLSGYFAFIVYDKST-ST 143 (241)
Q Consensus 74 ~~~~lv~nG~I~N~~~L~~~l---g~---~~~d~e~~lil~~~~~~g~~g~---~~i~~~l~~L~G~fa~vi~d~~~-~~ 143 (241)
++++++|||+|+|+.+|+++| |+ +.+|||+ ++++|.+|-+.|. +++.+++++|+|+|||++||.+. ++
T Consensus 91 ~~~~lvhNG~I~N~~~Lr~~L~~~g~~f~s~tDtEv--i~~l~~~~~~~g~~~~~av~~~~~~l~G~fa~~i~d~~~~~~ 168 (608)
T 2bpl_A 91 EHIVVVHNGIIENHEPLREELKARGYTFVSETDTEV--IAHLVNWELKQGGTLREAVLRAIPQLRGAYGTVIMDSRHPDT 168 (608)
T ss_dssp TTEEEEEEECCTTHHHHHHHHHHHTCCCSCCCHHHH--HHHHHHHHHTTCCCHHHHHHHHGGGCCSSEEEEEEETTCTTC
T ss_pred CCEEEEEEEEEeCHHHHHHHHHhcCCCCCCCCHHHH--HHHHHHHHHhcCCCHHHHHHHHHHhhcCceEEEEEecCCCCE
Confidence 789999999999999999988 54 6777777 4688988732232 45678999999999999999877 89
Q ss_pred EEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhcCCceEEeCCCeEEEEeCCcEEEEeC
Q 026270 144 LFVASDQFGKVPLYWGITADGHVAFADDADLLKGACGKSLASFPQGCFFSTAVGGLRSFEN 204 (241)
Q Consensus 144 l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~~~~i~~~ppG~~~~~~~~~~~~y~~ 204 (241)
|+++||+ |||||+.. ++.++||||.++|...+. .+.+++||++++++.++++.+..
T Consensus 169 l~~aRd~---~PL~~g~~-~~~~~~aSe~~al~~~~~-~~~~l~~G~i~~i~~~~~~~~~~ 224 (608)
T 2bpl_A 169 LLAARSG---SPLVIGLG-MGENFIASDQLALLPVTR-RFIFLEEGDIAEITRRSVNIFDK 224 (608)
T ss_dssp EEEEEEB---SCCEEEEC-SSCEEEESSGGGTTTTCC-EEEECCTTCEEEECSSCEEEECS
T ss_pred EEEEECC---CceEEEEe-CCeEEEEechHHHHhcCC-eEEEECCCeEEEEECCeEEEEeC
Confidence 9999997 99999998 567999999999988764 68999999999998888777654
No 6
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=99.96 E-value=1.3e-28 Score=233.75 Aligned_cols=148 Identities=19% Similarity=0.249 Sum_probs=122.2
Q ss_pred HcCCCCCcceEEcCcEEEEEeeCCCCCCCCceEeeC----CcEEEEEeeEEcchhhHHHHhCC---CCCCchHHHHHHHH
Q 026270 38 LQTNSSAVSVQVGDNVTLAYTHQNESPLRQRSFAVK----DEIFCLFEGALDNLGSLRQQYGL---AKSANEVILVIEAY 110 (241)
Q Consensus 38 ~~RGpd~~~~~~~~~~~l~~~~~~~~~~~QP~~~~~----~~~~lv~nG~I~N~~~L~~~lg~---~~~d~e~~lil~~~ 110 (241)
.+|+|++.+.+... ....||++..+ ++++++|||+|||+.+|+++|++ +.+|+|+ ++++|
T Consensus 40 ~~r~p~~~~~~~~~-----------~~~~QP~~~~~Pf~~~~~~lv~NGeIyN~~eLr~~L~~~f~t~sDtEv--il~l~ 106 (513)
T 1jgt_A 40 PQGERSLAATLVHA-----------PSVAPDRAVARSLTGAPTTAVLAGEIYNRDELLSVLPAGPAPEGDAEL--VLRLL 106 (513)
T ss_dssp TTGGGSCEEEEEEC-----------TTSCGGGGEEEECSSSSEEEEEEEEESCHHHHHHTSCSSCCCSSHHHH--HHHHH
T ss_pred ccCCCccccceeeC-----------CccCCCcccCCcCCCCCEEEEEEEEEeCHHHHHHHhCCCCCCCCHHHH--HHHHH
Confidence 45667666644322 12479988654 78999999999999999999854 6778887 46999
Q ss_pred HHhhcCCCCcHHHHhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCEEEEEeChhhhhhhc-----------
Q 026270 111 KALRDRAPYPPNHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGHVAFADDADLLKGAC----------- 179 (241)
Q Consensus 111 ~~~g~~g~~~i~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~~~faSe~~aL~~~~----------- 179 (241)
++|| .+++++|+|+|||++||.. +|+++|||+|+|||||+.. ++.++||||+++|...+
T Consensus 107 ~~~g-------~~~~~~l~G~fA~~i~d~~--~l~~aRD~~G~kPLyy~~~-~~~~~faSe~~aL~~~~~~~~~~l~~~~ 176 (513)
T 1jgt_A 107 ERYD-------LHAFRLVNGRFATVVRTGD--RVLLATDHAGSVPLYTCVA-PGEVRASTEAKALAAHRDPKGFPLADAR 176 (513)
T ss_dssp HHHG-------GGGGGTCCEEEEEEEEETT--EEEEEECTTCCSCCEEEEE-TTEEEEESCHHHHHTC--CCCCCCTTSE
T ss_pred HHHh-------HHhHhhcCeeEEEEEEECC--EEEEEECCCCCceeEEEEe-CCEEEEcchHHHHHhccCcccccccCCC
Confidence 9998 7899999999999999974 4999999999999999988 57899999999998876
Q ss_pred ----CCceEEeCCCeEEEEe--CCc--EEEEeCCCCC
Q 026270 180 ----GKSLASFPQGCFFSTA--VGG--LRSFENPKNK 208 (241)
Q Consensus 180 ----~~~i~~~ppG~~~~~~--~~~--~~~y~~~~~~ 208 (241)
.+.|+.+||||++.++ +++ .++||.+...
T Consensus 177 ~~t~~~~i~~l~pG~~l~i~~~~g~~~~~~yw~~~~~ 213 (513)
T 1jgt_A 177 RVAGLTGVYQVPAGAVMDIDLGSGTAVTHRTWTPGLS 213 (513)
T ss_dssp ECSSCSSCEECCTTEEEEEETTTTEEEEEECCCCCCS
T ss_pred ccccccceEEcCCCcEEEEEcCCCCEEEEeecCCccc
Confidence 2689999999999997 665 5789987653
No 7
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=99.93 E-value=1.8e-26 Score=218.56 Aligned_cols=144 Identities=13% Similarity=0.128 Sum_probs=119.7
Q ss_pred cEEEEEee--CCCCCCCCceEeeCCcEEEEEeeEEcchh---hHHHHhC--C-CCCCchHHHHHHHHHHhhcCCCCcHHH
Q 026270 52 NVTLAYTH--QNESPLRQRSFAVKDEIFCLFEGALDNLG---SLRQQYG--L-AKSANEVILVIEAYKALRDRAPYPPNH 123 (241)
Q Consensus 52 ~~~l~~~~--~~~~~~~QP~~~~~~~~~lv~nG~I~N~~---~L~~~lg--~-~~~d~e~~lil~~~~~~g~~g~~~i~~ 123 (241)
..+|||+| .+...+.||+.+.+++++++ |+|||+. +|+++|. . +.+|+|+ ++++|++|| .+
T Consensus 27 ~~~igh~R~~t~~~~~~QP~~~~~~~~~l~--GeI~N~~~~~eLr~~l~g~f~s~sDtEv--il~l~~~~g-------~~ 95 (503)
T 1q15_A 27 GEALSNGYLFIEQNGHYQKCEMERGTAYLI--GSLYNRTFLIGLAGVWEGEAYLANDAEL--LALLFTRLG-------AN 95 (503)
T ss_dssp EEEETTEEEEEETTCCEEEEECSSSEEEEE--ECCSCHHHHHHHHTTTCGGGGGCCHHHH--HHHHHHHHC-------GG
T ss_pred ceeEeeeeEEEcCCCCCCCcCcCCCeEEEE--EEEeCCCChHHHHHHhhCCCCCCChHHH--HHHHHHHHH-------HH
Confidence 35666666 12347889998877778777 9999999 9999883 2 6788888 469999998 78
Q ss_pred HhccccccceEEEEEcCCCEEEEEEcCCCCccEEEEEeCCCE-----------------EEEEeChhhhhhh-------c
Q 026270 124 VVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLYWGITADGH-----------------VAFADDADLLKGA-------C 179 (241)
Q Consensus 124 ~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~y~~~~~g~-----------------~~faSe~~aL~~~-------~ 179 (241)
++++|+|+|||++||..++ |+++|||+|+|||||+.. ++. ++||||+++|... .
T Consensus 96 ~l~~l~G~fa~~i~d~~~~-l~~aRD~~G~rPL~y~~~-~~~~~t~~l~l~~~~~~~~~~~faSE~~al~~~~~~~~~T~ 173 (503)
T 1q15_A 96 ALALAEGDFCFFIDEPNGE-LTVITESRGFSPVHVVQG-KKAWMTNSLKLVTAAEGEGALWFEEEALVCQSLMRADTYTP 173 (503)
T ss_dssp GGGGCCSSEEEEEECTTSC-EEEEECSSSSSCCEEEES-SSEEEESCHHHHHHHHCTTSSCBCCHHHHTTCSCCCTTCCS
T ss_pred HHHHcCEEEEEEEEeCCCC-EEEEECCCCCeeEEEEEe-CCceecccccccccccCCcceEEecchHHHHhccCCCCCcc
Confidence 9999999999999998877 999999999999999987 567 9999999999875 1
Q ss_pred CCceEEeCCCeEEEEeCCc------EEEEeCCCCC
Q 026270 180 GKSLASFPQGCFFSTAVGG------LRSFENPKNK 208 (241)
Q Consensus 180 ~~~i~~~ppG~~~~~~~~~------~~~y~~~~~~ 208 (241)
.+.|+.+|||+++.++.++ .++||.+...
T Consensus 174 ~~~v~~l~pG~~~~i~~~g~~~~~~~~~yw~~~~~ 208 (503)
T 1q15_A 174 VKNAQRLKPGAVHVLTHDSEGYSFVESRTLTTPAS 208 (503)
T ss_dssp BTTEEECCSSEEEEEEECTTCCEEEEEEESCCCCC
T ss_pred cCCeEEECCCeEEEEeCCCcccccceeeecCCccc
Confidence 4579999999998887654 6789987653
No 8
>3mdn_A Glutamine aminotransferase class-II domain protei; structural genomics, PSI-2, protein structure initiative; 2.09A {Ruegeria pomeroyi}
Probab=99.91 E-value=2.6e-24 Score=189.28 Aligned_cols=143 Identities=13% Similarity=0.103 Sum_probs=107.7
Q ss_pred EEEEEeeC---C--CCCCCCceEeeCCcEEEEEeeEEcchhhHHHHh---C--------CCCCCchHHHHHHHHHHhhcC
Q 026270 53 VTLAYTHQ---N--ESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY---G--------LAKSANEVILVIEAYKALRDR 116 (241)
Q Consensus 53 ~~l~~~~~---~--~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~l---g--------~~~~d~e~~lil~~~~~~g~~ 116 (241)
.+|||+|. + ...++||+.. ++++++|||+|+|+++||++| | .+.+|||++ +++|..++..
T Consensus 83 ~~igHvR~AT~g~~s~~n~qPf~~--g~~~~~HNG~I~N~~~Lr~~L~~~g~~~~f~~~~~~TDSEvi--~~l~~~~~~~ 158 (274)
T 3mdn_A 83 LFLSHVRASTGSCISRNNCHPFAA--RRWCFMHNGQVGGFEAFRKQADMAIADEFYTYRKGSTDSEVL--FLLALSEGLE 158 (274)
T ss_dssp EEEEEC------------CCCEEE--TTEEEEEEEEETTGGGGHHHHHHTSCHHHHTTCCSCCHHHHH--HHHHHHTTTT
T ss_pred EEEEEEccccCCCCcccCCCCccc--CCEEEEEeeEEcCHHHHHHHHHhhCCcceecCCCCCChHHHH--HHHHHHhhhc
Confidence 56899882 1 2368899986 689999999999999999887 3 156777774 5788666532
Q ss_pred C-C-CcHHHHhcccccc-----------ceEEEEEcCCCEEEEEEcC-CCCccEEEEEeCC--CEEEEEeChhhhhhhcC
Q 026270 117 A-P-YPPNHVVGHLSGY-----------FAFIVYDKSTSTLFVASDQ-FGKVPLYWGITAD--GHVAFADDADLLKGACG 180 (241)
Q Consensus 117 g-~-~~i~~~l~~L~G~-----------fa~vi~d~~~~~l~~aRD~-~G~rPL~y~~~~~--g~~~faSe~~aL~~~~~ 180 (241)
. + +++.+++++|+|+ |+|+++|. ++|+++||+ +|++||+|+...+ +.++||||. |...+
T Consensus 159 ~~~~~al~~~l~~l~G~~~~~g~~~~~a~~~~~~d~--~~l~a~Rd~~~G~~Pll~~~~~~~~~~~~vASE~--l~~~~- 233 (274)
T 3mdn_A 159 HDPHGALARAIARLEGLSRAHGTTPHMRLSAAFSDG--QTLYAARYSSDHIAPSVYYRYSHARQGWAVVSEP--LETDE- 233 (274)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHSCSSSEEEEEEEECS--SCEEEEEEESSSCCCCCEEEEETTTTEEEEESSC--C--CC-
T ss_pred CCHHHHHHHHHHHHHhHHhhcCcccCceEEEEEEcC--CEEEEEECCCCCCCCeEEEEEeCCCCEEEEEecc--cccCC-
Confidence 2 1 4567899999998 89999984 799999998 9999987777633 689999998 43333
Q ss_pred CceEEeCCCeEEEEeCCcEEEEeC
Q 026270 181 KSLASFPQGCFFSTAVGGLRSFEN 204 (241)
Q Consensus 181 ~~i~~~ppG~~~~~~~~~~~~y~~ 204 (241)
+.|++||||+++++++++++.+.-
T Consensus 234 ~~~~~v~pGeiv~i~~~~v~~~~~ 257 (274)
T 3mdn_A 234 GDWTELRPGRMLTIGAEGAAERDF 257 (274)
T ss_dssp SCCEECCSSEEEEEETTEEEEEEC
T ss_pred ceEEEECcCEEEEEeCCeEEEEEc
Confidence 459999999999998888776644
No 9
>1te5_A Conserved hypothetical protein; glutamine amidotransferase, amidotransferase, structural genomics, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa PAO1} SCOP: d.153.1.1
Probab=99.84 E-value=7.2e-22 Score=172.22 Aligned_cols=139 Identities=12% Similarity=0.041 Sum_probs=102.2
Q ss_pred EEEEEee----C-CCCCCCCceEee--CCcEEEEEeeEEcchhhHHHHhCC--CCCCchHHHHHHHHHHhhc----CCC-
Q 026270 53 VTLAYTH----Q-NESPLRQRSFAV--KDEIFCLFEGALDNLGSLRQQYGL--AKSANEVILVIEAYKALRD----RAP- 118 (241)
Q Consensus 53 ~~l~~~~----~-~~~~~~QP~~~~--~~~~~lv~nG~I~N~~~L~~~lg~--~~~d~e~~lil~~~~~~g~----~g~- 118 (241)
.+|||+| + ....++||+... .++++++|||.|.|+++ +.+++. +.+|||++ ++++.+... ..+
T Consensus 73 ~~IgHvR~AT~G~~~~~NahPf~~~~~~~~~a~aHNG~i~n~~~-r~~~~~~~s~TDSEvi--~~li~~~~~~~~~~~~~ 149 (257)
T 1te5_A 73 TVIGHIRQANVGKVGLSNTHPFIRELGGRYWTFAHNGQLADFQP-KPGFYRPVGETDSEAA--FCDLLNRVRRAFPEPVP 149 (257)
T ss_dssp EEEEEEEECCCSCCSGGGCSCEEEEETTEEEEEEEESCBSSCCC-CCCSSCCSSCCHHHHH--HHHHHHHHHHHCSSCCC
T ss_pred EEEEEeecCCCCCCCcCcCCCcEecCCCCeEEEEecCcccCchh-hhccCCcccCCHHHHH--HHHHHHHHHHhcCCCch
Confidence 5799999 1 123788999865 46799999999999998 766543 78888885 455654321 112
Q ss_pred -CcHHHHhcccc------ccceEEEEEcCCCEEEEEEc----------CCCCccEEE-------EE---eCCCEEEEEeC
Q 026270 119 -YPPNHVVGHLS------GYFAFIVYDKSTSTLFVASD----------QFGKVPLYW-------GI---TADGHVAFADD 171 (241)
Q Consensus 119 -~~i~~~l~~L~------G~fa~vi~d~~~~~l~~aRD----------~~G~rPL~y-------~~---~~~g~~~faSe 171 (241)
+++.++++.+. |.|+|++.|. ++|+++|| |+|+|||+. +. ..++.++||||
T Consensus 150 ~~a~~~al~~l~~~~~~~G~~n~~l~~g--~~l~a~rd~~L~~~~~~~p~g~rpL~~~~~~i~~g~~~~~~~~~~vvASE 227 (257)
T 1te5_A 150 VEVLLPVLISACDEYRKKGVFNALISDG--DWLFTFCSSKLAYITRRAPFGPARLKDADLTVDFHAETTPDDVVTVIATE 227 (257)
T ss_dssp HHHHHHHHHHHHHHHHTTBCCEEEEESS--SCEEEECSSCEEEEEEESSCCCEEEECSSEEEEECCCSSTTCEEEEEESS
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEEEcC--CEEEEEEcCCceEEeecCCCcccccccccceeecccccCCCCCEEEEEeC
Confidence 34555666665 9999999985 78999999 999999976 31 11246999999
Q ss_pred hhhhhhhcCCceEEeCCCeEEEEeCCcEE
Q 026270 172 ADLLKGACGKSLASFPQGCFFSTAVGGLR 200 (241)
Q Consensus 172 ~~aL~~~~~~~i~~~ppG~~~~~~~~~~~ 200 (241)
. |.. .+.|+++|||++++++++++.
T Consensus 228 ~--l~~--~~~wr~v~pGe~v~i~~~~~~ 252 (257)
T 1te5_A 228 P--LTD--NENWTLQQSGEWVLWWGGEVL 252 (257)
T ss_dssp C--SSS--SSSCEEECTTCEEEEETTEEE
T ss_pred c--cCC--CCCeeEeCCCEEEEEECCEEE
Confidence 4 542 457999999999999887755
No 10
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=99.58 E-value=2.1e-15 Score=155.13 Aligned_cols=138 Identities=17% Similarity=0.201 Sum_probs=102.6
Q ss_pred cEEEEEee-CC----CCCCCCceEeeCCcEEEEEeeEEcchhhHHHHh------------C--------C---CCCCchH
Q 026270 52 NVTLAYTH-QN----ESPLRQRSFAVKDEIFCLFEGALDNLGSLRQQY------------G--------L---AKSANEV 103 (241)
Q Consensus 52 ~~~l~~~~-~~----~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~~~l------------g--------~---~~~d~e~ 103 (241)
..+++|+| +. .-.++||+. +++|||+|.|+..+|+.+ | . +.+|||+
T Consensus 203 ~~aigH~RySTnt~p~w~~AQPf~------~laHNGeInn~~~nr~~m~are~~~~~~~~G~~l~~~~pii~~~~SDSev 276 (1479)
T 1ea0_A 203 DFAIYHQRYSTNTFPTWPLAQPFR------MLAHNGEINTVKGNVNWMKAHETRMEHPAFGTHMQDLKPVIGVGLSDSGS 276 (1479)
T ss_dssp SEEEEEECCCSCSCCCSTTSSCCS------SEEEEECCTTHHHHHHHHHHHGGGCCCSTTGGGHHHHCCSSCTTCCHHHH
T ss_pred eEEEeeecccCCCCCCcccCCccE------EEEECChhhCHHHHHHHHHHhHhhhcCchhhhhHHhcCCcCCCCCCcHHH
Confidence 47899999 21 226679984 389999999999988542 1 1 6788887
Q ss_pred HH-HHHHHHHhhcCCCCcH-------------------------HHHhccccccceEEEEEcCCCEEEEEEcCCCCccEE
Q 026270 104 IL-VIEAYKALRDRAPYPP-------------------------NHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKVPLY 157 (241)
Q Consensus 104 ~l-il~~~~~~g~~g~~~i-------------------------~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~rPL~ 157 (241)
+. +++++.+.|..=++++ ..+++.++|+||+++.|. +.++++|||+|.|||.
T Consensus 277 ld~~lelL~~~g~~l~~A~~~liPeaw~~~~~m~~~~~~fye~~~~~me~~dGp~slv~~dg--~~l~a~~DrnGlRPl~ 354 (1479)
T 1ea0_A 277 LDTVFEVMVRAGRTAPMVKMMLVPQALTSSQTTPDNHKALIQYCNSVMEPWDGPAALAMTDG--RWVVGGMDRNGLRPMR 354 (1479)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHSCCCCC---CCCHHHHHHHHHHHHHCCCCCSSEEEEECSS--SEEEEECCTTCCSCCE
T ss_pred HHHHHHHHHHcCCCHHHHHHHhCchhhcccccCCHHHHHHHHHHHHhhccCCCcEEEEEEeC--CEEEEEecCCCCcceE
Confidence 51 1333333221000111 245789999999999885 7999999999999999
Q ss_pred EEEeCCCEEEEEeChhhhhhhcCCceE--EeCCCeEEEEeCC
Q 026270 158 WGITADGHVAFADDADLLKGACGKSLA--SFPQGCFFSTAVG 197 (241)
Q Consensus 158 y~~~~~g~~~faSe~~aL~~~~~~~i~--~~ppG~~~~~~~~ 197 (241)
|+.++|+.+++|||..+|...+.+.++ ++.||+++.++..
T Consensus 355 ~g~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id~~ 396 (1479)
T 1ea0_A 355 YTITTDGLIIGGSETGMVKIDETQVIEKGRLGPGEMIAVDLQ 396 (1479)
T ss_dssp EEEETTSEEEECSSSTTSCCCGGGEEEEEECCTTCEEEEETT
T ss_pred EEEECCCEEEEEcccccccCcchheeeccCCCCCeEEEEECC
Confidence 999866789999999999877776677 9999999888643
No 11
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=99.53 E-value=2.9e-14 Score=147.02 Aligned_cols=138 Identities=14% Similarity=0.126 Sum_probs=101.5
Q ss_pred cEEEEEee-CC----CCCCCCceEeeCCcEEEEEeeEEcchhhHH------HH-----------h---C-C---CCCCch
Q 026270 52 NVTLAYTH-QN----ESPLRQRSFAVKDEIFCLFEGALDNLGSLR------QQ-----------Y---G-L---AKSANE 102 (241)
Q Consensus 52 ~~~l~~~~-~~----~~~~~QP~~~~~~~~~lv~nG~I~N~~~L~------~~-----------l---g-~---~~~d~e 102 (241)
..+++|+| +. .-.++||+. +++|||||.|...+| +. | + . +.+|||
T Consensus 199 ~~aigH~RySTnt~p~w~~AQPf~------~LaHNGeInt~~~nrnwm~aR~~~~~s~~~~g~~l~~~~p~i~~~~SDSe 272 (1520)
T 1ofd_A 199 NFAVYHRRFSTNTMPKWPLAQPMR------LLGHNGEINTLLGNINWMAAREKELEVSGWTKAELEALTPIVNQANSDSY 272 (1520)
T ss_dssp SEEEEEECCCSSSCCCGGGSSCCS------SEEEEECCTTHHHHHHHHHHHGGGCCCTTCCHHHHHHHCCSCCTTSCHHH
T ss_pred eEEEEEccccCCCCCCcccCCchh------eeEecchhhcHHHHHHHHHHHHHHhcCcccchhhHHhhCCcCCCCCCcHH
Confidence 46899998 21 125689984 389999999887776 21 1 3 2 678888
Q ss_pred HHH-HHHHHHHhhcCCCCcH---------------------------HHHhccccccceEEEEEcCCCEEEEEEcCCCCc
Q 026270 103 VIL-VIEAYKALRDRAPYPP---------------------------NHVVGHLSGYFAFIVYDKSTSTLFVASDQFGKV 154 (241)
Q Consensus 103 ~~l-il~~~~~~g~~g~~~i---------------------------~~~l~~L~G~fa~vi~d~~~~~l~~aRD~~G~r 154 (241)
++. +++++.+.|..=++++ ..+++.++|+|++++.|. +.++++|||+|.|
T Consensus 273 ~ld~~lelL~~~g~~l~~A~~~liPeaw~~~~~m~~~~~~~~fyey~~~~me~~dGpaalv~~dg--~~l~a~~DrnGlR 350 (1520)
T 1ofd_A 273 NLDSALELLVRTGRSPLEAAMILVPEAYKNQPALKDYPEISDFHDYYSGLQEPWDGPALLVFSDG--KIVGAGLDRNGLR 350 (1520)
T ss_dssp HHHHHHHHHHHTTCCHHHHHHHHSCCCCTTCGGGTTCHHHHHHHHHHTTTCCCCCSSEEEEEECS--SEEEEEECTTCCS
T ss_pred HHHHHHHHHHhcCCCHHHHHHHhCcchhcccccccccHHHHHHHHHHHHhcccCCCCEEEEEEeC--CEEEEEecCCCCC
Confidence 752 1233333221000111 234789999999999985 7999999999999
Q ss_pred cEEEEEeCCCEEEEEeChhhhhhhcCCceE--EeCCCeEEEEeCC
Q 026270 155 PLYWGITADGHVAFADDADLLKGACGKSLA--SFPQGCFFSTAVG 197 (241)
Q Consensus 155 PL~y~~~~~g~~~faSe~~aL~~~~~~~i~--~~ppG~~~~~~~~ 197 (241)
||.|+.++|+.+++|||..+|...+.+.++ ++.||+++.++..
T Consensus 351 Pl~~~~t~d~~~v~ASE~galdi~~a~~vrkg~l~PGemv~id~~ 395 (1520)
T 1ofd_A 351 PARYCITKDDYIVLGSEAGVVDLPEVDIVEKGRLAPGQMIAVDLA 395 (1520)
T ss_dssp CCEEEEETTCCEEEESSTTCSCCCGGGEEEEEECCTTCEEEEETT
T ss_pred ceEEEEeCCCEEEEEcccccccCcchheeeccCCCCCeEEEEECC
Confidence 999999866789999999999877777777 9999999988653
No 12
>1vk9_A Conserved hypothetical protein TM1506; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: UNL; 2.70A {Thermotoga maritima} SCOP: c.97.1.3
Probab=34.68 E-value=11 Score=29.44 Aligned_cols=26 Identities=19% Similarity=0.485 Sum_probs=20.4
Q ss_pred cccceEEEEEcCCCEEEEEEcCCCCccEE
Q 026270 129 SGYFAFIVYDKSTSTLFVASDQFGKVPLY 157 (241)
Q Consensus 129 ~G~fa~vi~d~~~~~l~~aRD~~G~rPL~ 157 (241)
+|.|++++.+ .+.++-..++ |++|||
T Consensus 27 e~~~ScVv~~--~~~i~ts~~r-Gv~pL~ 52 (151)
T 1vk9_A 27 KKDLSLLAYS--GRSIFESKDS-GLKPVV 52 (151)
T ss_dssp HTTCSEEEES--SSEEEEECCS-TTHHHH
T ss_pred hCCeeEEEec--CCEEEEeCCc-ChHHHH
Confidence 4789999954 4577777775 999998
Done!