Citrus Sinensis ID: 026278


Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-
MMNIFVSGGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDDIAVWQKLSDSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKSVLESMPKWPERLHVAPERISDIHGGSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWYILLLFLY
ccEEEEEccEEEEEEccEEccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHccccEEEEEEccEEEEEEcccccHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHccccccEEHHccccccEEEEEEEcccccccccEEcccEEHHHHHHHHHHHHcc
cccEEEcccEEEEEEcEEcccccEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHcccccccccccccccccccEEcccHHcccccccccccccccccccccHHcccccccHcccccccHHHHHHHHHHHHHHHHHHHHHcccccccccEEHHcHHHcccHHHHHHHcccEEEEEEEcccccccccEEEccccEEEEcHHHHHHHHHc
MMNIFVSGGIYLLEVHRilrpggfwvlsgppvnyehrwrgwnTTIEEQRSDYKKLQDLLTSMCFKLYAKKDDIAVWQKlsdsscynklsnpdvyppkcddslepdsawytplrpcvvvprpnlkksvlesmpkwperlhvaperisdihggsasafkhddskwnVRVKHYKKLlpalgtdkirnvmDMNTLYGGFAaaviddplWVMNVVSSYAANTLAVVYDRGLIGTYHDWYILLLFLY
MMNIFVSGGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDDIAVWQKLSDSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKSVLESMPKWPERLHVAPERISDIhggsasafkhddskwnVRVKHYKKllpalgtdkirnVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWYILLLFLY
MMNIFVSGGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDDIAVWQKLSDSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKSVLESMPKWPERLHVAPERISDIHGGSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWYILLLFLY
***IFVSGGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDDIAVWQKLSDSSCYNKLSNPDVYPPKC***LEPDSAWYTPLRPCVVVPRPNLKKSVL*****W***LHV*******I******AFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWYILLLFL*
**NI**SGGIYLLEVHRILRPGGFWVLSGPPVNYEHRWR**********SDYKKLQDLLTSMCFKLYAKKDDIAVWQKLSDSSCY***********KCDDSLEPDSAWYTPLRPCVVVP*******************************GSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWYILLLFLY
MMNIFVSGGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDDIAVWQKLSDSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKSVLESMPKWPERLHVAPERISDIHGGSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWYILLLFLY
MMNIFVSGGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDDIAVWQKLSDSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNL***VLESMPKWPERLHVAPERISDIHGGSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWYILLLFLY
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MMNIFVSGGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDDIAVWQKLSDSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKSVLESMPKWPERLHVAPERISDIHGGSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWYILLLFLY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query241 2.2.26 [Sep-21-2011]
Q94II3600 Probable methyltransferas yes no 0.937 0.376 0.823 1e-112
Q9C6S7603 Probable methyltransferas no no 0.937 0.374 0.801 1e-110
Q9SZX8 633 Probable methyltransferas no no 0.941 0.358 0.429 5e-50
Q9C884639 Probable methyltransferas no no 0.946 0.356 0.412 2e-48
O80844631 Probable methyltransferas no no 0.929 0.354 0.421 1e-47
Q9ZPH9633 Probable methyltransferas no no 0.925 0.352 0.410 2e-47
B9DFI7616 Probable methyltransferas no no 0.917 0.358 0.396 3e-44
Q9ZW75611 Probable methyltransferas no no 0.925 0.364 0.409 3e-42
Q94EJ6 621 Probable methyltransferas no no 0.904 0.351 0.406 3e-41
Q93W95600 Probable methyltransferas no no 0.875 0.351 0.389 2e-39
>sp|Q94II3|PMTL_ARATH Probable methyltransferase PMT21 OS=Arabidopsis thaliana GN=ERD3 PE=2 SV=1 Back     alignment and function desciption
 Score =  404 bits (1039), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 187/227 (82%), Positives = 207/227 (91%), Gaps = 1/227 (0%)

Query: 8   GGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLY 67
           GG+YLLEVHRILRPGGFWVLSGPPVNYE+RW+GW+TTIEEQRS+Y+KLQ+LL+SMCFK+Y
Sbjct: 273 GGVYLLEVHRILRPGGFWVLSGPPVNYENRWKGWDTTIEEQRSNYEKLQELLSSMCFKMY 332

Query: 68  AKKDDIAVWQKLSDSSCYNKLSN-PDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKS 126
           AKKDDIAVWQK  D+ CYNKLSN PD YPPKCDDSLEPDSAWYTPLRPCVVVP P LKK+
Sbjct: 333 AKKDDIAVWQKSPDNLCYNKLSNDPDAYPPKCDDSLEPDSAWYTPLRPCVVVPSPKLKKT 392

Query: 127 VLESMPKWPERLHVAPERISDIHGGSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVM 186
            LES PKWPERLH  PERISD+ GG+ + FKHDDSKW  R KHYKKLLPA+G+DKIRNVM
Sbjct: 393 DLESTPKWPERLHTTPERISDVPGGNGNVFKHDDSKWKTRAKHYKKLLPAIGSDKIRNVM 452

Query: 187 DMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDW 233
           DMNT YGG AAA+++DPLWVMNVVSSYAANTL VV+DRGLIGTYHDW
Sbjct: 453 DMNTAYGGLAAALVNDPLWVMNVVSSYAANTLPVVFDRGLIGTYHDW 499





Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 1EC: .EC: 1EC: .EC: -
>sp|Q9C6S7|PMTK_ARATH Probable methyltransferase PMT20 OS=Arabidopsis thaliana GN=At1g31850 PE=1 SV=1 Back     alignment and function description
>sp|Q9SZX8|PMTH_ARATH Probable methyltransferase PMT17 OS=Arabidopsis thaliana GN=At4g10440 PE=3 SV=1 Back     alignment and function description
>sp|Q9C884|PMTI_ARATH Probable methyltransferase PMT18 OS=Arabidopsis thaliana GN=At1g33170 PE=2 SV=1 Back     alignment and function description
>sp|O80844|PMTG_ARATH Probable methyltransferase PMT16 OS=Arabidopsis thaliana GN=At2g45750 PE=3 SV=1 Back     alignment and function description
>sp|Q9ZPH9|PMTF_ARATH Probable methyltransferase PMT15 OS=Arabidopsis thaliana GN=At4g00750 PE=1 SV=1 Back     alignment and function description
>sp|B9DFI7|PMT2_ARATH Probable methyltransferase PMT2 OS=Arabidopsis thaliana GN=At1g26850 PE=1 SV=2 Back     alignment and function description
>sp|Q9ZW75|PMTJ_ARATH Probable methyltransferase PMT19 OS=Arabidopsis thaliana GN=At2g43200 PE=3 SV=1 Back     alignment and function description
>sp|Q94EJ6|PMTE_ARATH Probable methyltransferase PMT14 OS=Arabidopsis thaliana GN=At4g18030 PE=1 SV=1 Back     alignment and function description
>sp|Q93W95|PMTD_ARATH Probable methyltransferase PMT13 OS=Arabidopsis thaliana GN=At4g00740 PE=1 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query241
255557673 501 S-adenosylmethionine-dependent methyltra 0.937 0.451 0.880 1e-118
224139094 599 predicted protein [Populus trichocarpa] 0.937 0.377 0.862 1e-116
224074464 580 predicted protein [Populus trichocarpa] 0.937 0.389 0.858 1e-115
297800138 600 early-responsive to dehydration 3 [Arabi 0.937 0.376 0.832 1e-111
225427524 600 PREDICTED: probable methyltransferase PM 0.937 0.376 0.827 1e-110
296088461 577 unnamed protein product [Vitis vinifera] 0.937 0.391 0.827 1e-110
18415244 600 putative methyltransferase PMT21 [Arabid 0.937 0.376 0.823 1e-110
227206130 429 AT1G31850 [Arabidopsis thaliana] 0.937 0.526 0.801 1e-108
15222494 603 putative methyltransferase PMT20 [Arabid 0.937 0.374 0.801 1e-108
449453314 602 PREDICTED: probable methyltransferase PM 0.933 0.373 0.805 1e-108
>gi|255557673|ref|XP_002519866.1| S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis] gi|223540912|gb|EEF42470.1| S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  429 bits (1103), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 199/226 (88%), Positives = 216/226 (95%)

Query: 8   GGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLY 67
           GGIYLLE++RILRPGGFWVLSGPPVNYE+RWRGWNTTIEEQ+SDY+KL++LLT+MCFKLY
Sbjct: 276 GGIYLLEINRILRPGGFWVLSGPPVNYENRWRGWNTTIEEQKSDYEKLEELLTAMCFKLY 335

Query: 68  AKKDDIAVWQKLSDSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKSV 127
            KKDDIAVWQK SDSSC++KL+NPD YPPKCDDSLEPDSAWYTPLRPCVVVP P  KKSV
Sbjct: 336 NKKDDIAVWQKASDSSCFSKLANPDAYPPKCDDSLEPDSAWYTPLRPCVVVPSPKHKKSV 395

Query: 128 LESMPKWPERLHVAPERISDIHGGSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMD 187
           LES+PKWPERLHVAPERISD+HGGSAS FKHDDSKW VR KHYKKLLPA+GTDKIRN MD
Sbjct: 396 LESIPKWPERLHVAPERISDLHGGSASTFKHDDSKWKVRAKHYKKLLPAIGTDKIRNAMD 455

Query: 188 MNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDW 233
           MNT+YGGFAAAV+DDPLWVMNVVSSYAANTLAVV+DRGLIGTYHDW
Sbjct: 456 MNTVYGGFAAAVVDDPLWVMNVVSSYAANTLAVVFDRGLIGTYHDW 501




Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224139094|ref|XP_002326766.1| predicted protein [Populus trichocarpa] gi|118486237|gb|ABK94960.1| unknown [Populus trichocarpa] gi|222834088|gb|EEE72565.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|224074464|ref|XP_002304375.1| predicted protein [Populus trichocarpa] gi|222841807|gb|EEE79354.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|297800138|ref|XP_002867953.1| early-responsive to dehydration 3 [Arabidopsis lyrata subsp. lyrata] gi|297313789|gb|EFH44212.1| early-responsive to dehydration 3 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|225427524|ref|XP_002265127.1| PREDICTED: probable methyltransferase PMT20 [Vitis vinifera] Back     alignment and taxonomy information
>gi|296088461|emb|CBI37452.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|18415244|ref|NP_567575.1| putative methyltransferase PMT21 [Arabidopsis thaliana] gi|30684664|ref|NP_849408.1| putative methyltransferase PMT21 [Arabidopsis thaliana] gi|75166193|sp|Q94II3.1|PMTL_ARATH RecName: Full=Probable methyltransferase PMT21; AltName: Full=Protein EARLY-RESPONSIVE TO DEHYDRATION 3 gi|15320410|dbj|BAB63914.1| ERD3 protein [Arabidopsis thaliana] gi|222424514|dbj|BAH20212.1| AT4G19120 [Arabidopsis thaliana] gi|222424754|dbj|BAH20330.1| AT4G19120 [Arabidopsis thaliana] gi|332658745|gb|AEE84145.1| putative methyltransferase PMT21 [Arabidopsis thaliana] gi|332658746|gb|AEE84146.1| putative methyltransferase PMT21 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|227206130|dbj|BAH57120.1| AT1G31850 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|15222494|ref|NP_174468.1| putative methyltransferase PMT20 [Arabidopsis thaliana] gi|30692610|ref|NP_849736.1| putative methyltransferase PMT20 [Arabidopsis thaliana] gi|42571717|ref|NP_973949.1| putative methyltransferase PMT20 [Arabidopsis thaliana] gi|75169170|sp|Q9C6S7.1|PMTK_ARATH RecName: Full=Probable methyltransferase PMT20 gi|12321307|gb|AAG50728.1|AC079041_21 unknown protein [Arabidopsis thaliana] gi|22135826|gb|AAM91099.1| At1g31850/68069_m00154 [Arabidopsis thaliana] gi|23463061|gb|AAN33200.1| At1g31850/68069_m00154 [Arabidopsis thaliana] gi|332193284|gb|AEE31405.1| putative methyltransferase PMT20 [Arabidopsis thaliana] gi|332193285|gb|AEE31406.1| putative methyltransferase PMT20 [Arabidopsis thaliana] gi|332193286|gb|AEE31407.1| putative methyltransferase PMT20 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|449453314|ref|XP_004144403.1| PREDICTED: probable methyltransferase PMT21-like [Cucumis sativus] gi|449524378|ref|XP_004169200.1| PREDICTED: probable methyltransferase PMT21-like [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query241
TAIR|locus:2134756600 ERD3 "early-responsive to dehy 0.937 0.376 0.823 1.3e-107
TAIR|locus:2034522603 AT1G31850 [Arabidopsis thalian 0.937 0.374 0.801 6.5e-106
TAIR|locus:2127711 633 AT4G10440 [Arabidopsis thalian 0.937 0.357 0.432 3.1e-51
TAIR|locus:2196651639 AT1G33170 [Arabidopsis thalian 0.946 0.356 0.412 3.2e-49
TAIR|locus:2050679631 AT2G45750 [Arabidopsis thalian 0.912 0.348 0.422 1.1e-48
TAIR|locus:2117728633 AT4G00750 [Arabidopsis thalian 0.917 0.349 0.415 6e-48
TAIR|locus:2202805616 AT1G26850 [Arabidopsis thalian 0.917 0.358 0.400 5.6e-45
TAIR|locus:2041031611 AT2G43200 [Arabidopsis thalian 0.921 0.363 0.412 2.8e-43
TAIR|locus:2141035 621 AT4G18030 [Arabidopsis thalian 0.908 0.352 0.417 9.3e-43
TAIR|locus:2145658612 AT5G14430 [Arabidopsis thalian 0.887 0.349 0.393 2.9e-39
TAIR|locus:2134756 ERD3 "early-responsive to dehydration 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
 Identities = 187/227 (82%), Positives = 207/227 (91%)

Query:     8 GGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLY 67
             GG+YLLEVHRILRPGGFWVLSGPPVNYE+RW+GW+TTIEEQRS+Y+KLQ+LL+SMCFK+Y
Sbjct:   273 GGVYLLEVHRILRPGGFWVLSGPPVNYENRWKGWDTTIEEQRSNYEKLQELLSSMCFKMY 332

Query:    68 AKKDDIAVWQKLSDSSCYNKLSN-PDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKS 126
             AKKDDIAVWQK  D+ CYNKLSN PD YPPKCDDSLEPDSAWYTPLRPCVVVP P LKK+
Sbjct:   333 AKKDDIAVWQKSPDNLCYNKLSNDPDAYPPKCDDSLEPDSAWYTPLRPCVVVPSPKLKKT 392

Query:   127 VLESMPKWPERLHVAPERISDIHGGSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVM 186
              LES PKWPERLH  PERISD+ GG+ + FKHDDSKW  R KHYKKLLPA+G+DKIRNVM
Sbjct:   393 DLESTPKWPERLHTTPERISDVPGGNGNVFKHDDSKWKTRAKHYKKLLPAIGSDKIRNVM 452

Query:   187 DMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDW 233
             DMNT YGG AAA+++DPLWVMNVVSSYAANTL VV+DRGLIGTYHDW
Sbjct:   453 DMNTAYGGLAAALVNDPLWVMNVVSSYAANTLPVVFDRGLIGTYHDW 499




GO:0005794 "Golgi apparatus" evidence=ISM;IDA
GO:0008168 "methyltransferase activity" evidence=IEA
GO:0009269 "response to desiccation" evidence=RCA
GO:0009409 "response to cold" evidence=RCA
GO:0009651 "response to salt stress" evidence=RCA
GO:0009737 "response to abscisic acid stimulus" evidence=RCA
GO:0005768 "endosome" evidence=IDA
GO:0005802 "trans-Golgi network" evidence=IDA
TAIR|locus:2034522 AT1G31850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2127711 AT4G10440 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2196651 AT1G33170 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2050679 AT2G45750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2117728 AT4G00750 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2202805 AT1G26850 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2041031 AT2G43200 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2141035 AT4G18030 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2145658 AT5G14430 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q94II3PMTL_ARATH2, ., 1, ., 1, ., -0.82370.93770.3766yesno

EC Number Prediction by Ezypred Server ?

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!


Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Your Input:
estExt_fgenesh4_pg.C_290313
SubName- Full=Putative uncharacterized protein; (599 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query241
pfam03141506 pfam03141, Methyltransf_29, Putative S-adenosyl-L- 1e-102
>gnl|CDD|217386 pfam03141, Methyltransf_29, Putative S-adenosyl-L-methionine-dependent methyltransferase Back     alignment and domain information
 Score =  306 bits (786), Expect = e-102
 Identities = 113/229 (49%), Positives = 145/229 (63%), Gaps = 12/229 (5%)

Query: 8   GGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLY 67
            GI LLEV R+LRPGG++VLSGPPV             E+ + ++K ++ L  S+C+KL 
Sbjct: 198 DGILLLEVDRVLRPGGYFVLSGPPVY--------ARDEEDLQEEWKAMEALAKSLCWKLV 249

Query: 68  AKKDDIAVWQKLSDSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKSV 127
           AKK DIA+WQK  ++SCYNK   P   PP C DS +PD+AWY P+  C+        +  
Sbjct: 250 AKKGDIAIWQKPVNNSCYNKRE-PGKKPPLCKDSDDPDAAWYVPMEACITPLPEVSHEVG 308

Query: 128 LESMPKWPERLHVAPERISD--IHGGSASAFKHDDSKWNVRVKHYKKLL-PALGTDKIRN 184
              + KWPERL   P R++   I G SA AFK D   W  RV  YK+LL   +   ++RN
Sbjct: 309 GGWLEKWPERLTAVPPRLASGQIGGVSAEAFKADTELWKRRVSKYKRLLKLLIDKGRVRN 368

Query: 185 VMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDW 233
           VMDMN  +GGFAAA+IDDP+WVMNVV   + +TL V+YDRGLIG YHDW
Sbjct: 369 VMDMNAGFGGFAAALIDDPVWVMNVVPVDSPDTLPVIYDRGLIGIYHDW 417


This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase. Length = 506

Conserved Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 241
PF03141506 Methyltransf_29: Putative S-adenosyl-L-methionine- 100.0
PF03141 506 Methyltransf_29: Putative S-adenosyl-L-methionine- 95.47
PF07942270 N2227: N2227-like protein; InterPro: IPR012901 Thi 91.56
PRK00517250 prmA ribosomal protein L11 methyltransferase; Revi 84.09
>PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases Back     alignment and domain information
Probab=100.00  E-value=1.6e-105  Score=770.66  Aligned_cols=231  Identities=49%  Similarity=0.899  Sum_probs=223.3

Q ss_pred             CccccccCcEEEEEeeceecCCcEEEEcCCCccccccccCCCccHHHHHHHHHHHHHHHHhcccceeeeecCeEEEecCC
Q 026278            1 MMNIFVSGGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDDIAVWQKLS   80 (241)
Q Consensus         1 ~IpW~~~dG~~LlEvdRvLRPGGYfV~S~pPv~~k~~~~~~~~~~e~~~~e~~~~~~la~~lCW~~va~~~~~aIwqKp~   80 (241)
                      .|+|+++||+||+||||||||||||||||||||        +++++++++||++|++||++|||++|++++||||||||+
T Consensus       191 ~i~W~~~~g~~l~evdRvLRpGGyfv~S~ppv~--------~r~~~~~~~~~~~~~~l~~~lCW~~va~~~~~aIwqKp~  262 (506)
T PF03141_consen  191 LIPWHPNDGFLLFEVDRVLRPGGYFVLSGPPVY--------QRTDEDLEEEWNAMEDLAKSLCWKKVAEKGDTAIWQKPT  262 (506)
T ss_pred             cccchhcccceeehhhhhhccCceEEecCCccc--------ccchHHHHHHHHHHHHHHHHHHHHHheeeCCEEEEeccC
Confidence            389999999999999999999999999999996        467889999999999999999999999999999999999


Q ss_pred             CchhhcccCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCcccccCCCCCCcccccCCCccccc--ccCCChhhhhh
Q 026278           81 DSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKSVLESMPKWPERLHVAPERISD--IHGGSASAFKH  158 (241)
Q Consensus        81 ~~~Cy~~r~~~~~~PplC~~~~dpd~aWY~~m~~Cit~~p~~~~~~~~~~~~~WP~RL~~~P~rl~~--i~g~s~e~F~~  158 (241)
                      ||+||.+|+. .+.||+|++++|||++||++|++|||++|+..++.+++++++||+||+++|+||++  ++|+++|+|++
T Consensus       263 ~~~Cy~~r~~-~~~pplC~~~~dpd~aWY~~l~~Cit~~p~~~~~~~~~~~~~WP~RL~~~P~rl~~~~~~g~~~e~F~~  341 (506)
T PF03141_consen  263 NNSCYQKRKP-GKSPPLCDSSDDPDAAWYVPLEACITPLPEVSSEIAGGWLPKWPERLNAVPPRLSSGSIPGISPEEFKE  341 (506)
T ss_pred             CchhhhhccC-CCCCCCCCCCCCCcchhhcchhhhcCcCCcccccccccCCCCChhhhccCchhhhcCCcCCCCHHHHHH
Confidence            9999999997 89999999899999999999999999999988889999999999999999999996  88999999999


Q ss_pred             hHHHHHHHHHHHHHhcC-CCCCCCcceeccccccccchhhhccCCCceeEEeccCCCCCcccceeccccccccccccccC
Q 026278          159 DDSKWNVRVKHYKKLLP-ALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWYILL  237 (241)
Q Consensus       159 Dt~~Wk~~V~~Y~~~l~-~l~~~~iRNVMDMnA~~GGFAAAL~~~pvWVMNVVP~~~~nTL~vIydRGLIG~yHDWCEaF  237 (241)
                      ||++|+++|++|+++++ .|++++|||||||||+||||||||+++|||||||||+.++|||||||||||||+||||||+|
T Consensus       342 Dt~~Wk~~V~~Y~~l~~~~i~~~~iRNVMDMnAg~GGFAAAL~~~~VWVMNVVP~~~~ntL~vIydRGLIG~yhDWCE~f  421 (506)
T PF03141_consen  342 DTKHWKKRVSHYKKLLGLAIKWGRIRNVMDMNAGYGGFAAALIDDPVWVMNVVPVSGPNTLPVIYDRGLIGVYHDWCEAF  421 (506)
T ss_pred             HHHHHHHHHHHHHHhhcccccccceeeeeeecccccHHHHHhccCCceEEEecccCCCCcchhhhhcccchhccchhhcc
Confidence            99999999999999886 79999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cCC
Q 026278          238 LFL  240 (241)
Q Consensus       238 sT~  240 (241)
                      ||-
T Consensus       422 sTY  424 (506)
T PF03141_consen  422 STY  424 (506)
T ss_pred             CCC
Confidence            993



; GO: 0008168 methyltransferase activity

>PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases Back     alignment and domain information
>PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT) Back     alignment and domain information
>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

No hit with e-value below 0.005

Structure Templates Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query241
2ld4_A176 Anamorsin; methyltransferase-like fold, alpha/beta 87.56
3grz_A205 L11 mtase, ribosomal protein L11 methyltransferase 83.69
2zfu_A215 Nucleomethylin, cerebral protein 1; nucleolar prot 82.44
2a14_A263 Indolethylamine N-methyltransferase; SGC,INMT, str 82.3
3orh_A236 Guanidinoacetate N-methyltransferase; structura ge 80.82
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A Back     alignment and structure
Probab=87.56  E-value=0.15  Score=39.89  Aligned_cols=22  Identities=50%  Similarity=0.810  Sum_probs=18.1

Q ss_pred             cEEEEEeeceecCCcEEEEcCC
Q 026278            9 GIYLLEVHRILRPGGFWVLSGP   30 (241)
Q Consensus         9 G~~LlEvdRvLRPGGYfV~S~p   30 (241)
                      -.+|-|+-|+|||||+|+++.|
T Consensus        81 ~~~l~~~~r~LkpgG~l~~~~~  102 (176)
T 2ld4_A           81 AEILAEIARILRPGGCLFLKEP  102 (176)
T ss_dssp             HHHHHHHHHHEEEEEEEEEEEE
T ss_pred             HHHHHHHHHHCCCCEEEEEEcc
Confidence            4456788899999999999755



>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} Back     alignment and structure
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} Back     alignment and structure
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 Back     alignment and structure
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query241
d1p91a_268 rRNA methyltransferase RlmA {Escherichia coli [Tax 86.67
d2a14a1257 Indolethylamine N-methyltransferase, INMT {Human ( 81.83
d1vl5a_231 Hypothetical protein BH2331 {Bacillus halodurans [ 80.46
>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]
Probab=86.67  E-value=0.036  Score=45.79  Aligned_cols=18  Identities=33%  Similarity=0.839  Sum_probs=16.5

Q ss_pred             EEeeceecCCcEEEEcCC
Q 026278           13 LEVHRILRPGGFWVLSGP   30 (241)
Q Consensus        13 lEvdRvLRPGGYfV~S~p   30 (241)
                      -|+.|||||||++|++.|
T Consensus       161 ~e~~rvLkpgG~l~~~~p  178 (268)
T d1p91a_         161 EELARVVKPGGWVITATP  178 (268)
T ss_dssp             HHHHHHEEEEEEEEEEEE
T ss_pred             HHHHHHhCCCcEEEEEee
Confidence            489999999999999977



>d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure