Citrus Sinensis ID: 026278
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 241 | ||||||
| 255557673 | 501 | S-adenosylmethionine-dependent methyltra | 0.937 | 0.451 | 0.880 | 1e-118 | |
| 224139094 | 599 | predicted protein [Populus trichocarpa] | 0.937 | 0.377 | 0.862 | 1e-116 | |
| 224074464 | 580 | predicted protein [Populus trichocarpa] | 0.937 | 0.389 | 0.858 | 1e-115 | |
| 297800138 | 600 | early-responsive to dehydration 3 [Arabi | 0.937 | 0.376 | 0.832 | 1e-111 | |
| 225427524 | 600 | PREDICTED: probable methyltransferase PM | 0.937 | 0.376 | 0.827 | 1e-110 | |
| 296088461 | 577 | unnamed protein product [Vitis vinifera] | 0.937 | 0.391 | 0.827 | 1e-110 | |
| 18415244 | 600 | putative methyltransferase PMT21 [Arabid | 0.937 | 0.376 | 0.823 | 1e-110 | |
| 227206130 | 429 | AT1G31850 [Arabidopsis thaliana] | 0.937 | 0.526 | 0.801 | 1e-108 | |
| 15222494 | 603 | putative methyltransferase PMT20 [Arabid | 0.937 | 0.374 | 0.801 | 1e-108 | |
| 449453314 | 602 | PREDICTED: probable methyltransferase PM | 0.933 | 0.373 | 0.805 | 1e-108 |
| >gi|255557673|ref|XP_002519866.1| S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis] gi|223540912|gb|EEF42470.1| S-adenosylmethionine-dependent methyltransferase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 429 bits (1103), Expect = e-118, Method: Compositional matrix adjust.
Identities = 199/226 (88%), Positives = 216/226 (95%)
Query: 8 GGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLY 67
GGIYLLE++RILRPGGFWVLSGPPVNYE+RWRGWNTTIEEQ+SDY+KL++LLT+MCFKLY
Sbjct: 276 GGIYLLEINRILRPGGFWVLSGPPVNYENRWRGWNTTIEEQKSDYEKLEELLTAMCFKLY 335
Query: 68 AKKDDIAVWQKLSDSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKSV 127
KKDDIAVWQK SDSSC++KL+NPD YPPKCDDSLEPDSAWYTPLRPCVVVP P KKSV
Sbjct: 336 NKKDDIAVWQKASDSSCFSKLANPDAYPPKCDDSLEPDSAWYTPLRPCVVVPSPKHKKSV 395
Query: 128 LESMPKWPERLHVAPERISDIHGGSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVMD 187
LES+PKWPERLHVAPERISD+HGGSAS FKHDDSKW VR KHYKKLLPA+GTDKIRN MD
Sbjct: 396 LESIPKWPERLHVAPERISDLHGGSASTFKHDDSKWKVRAKHYKKLLPAIGTDKIRNAMD 455
Query: 188 MNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDW 233
MNT+YGGFAAAV+DDPLWVMNVVSSYAANTLAVV+DRGLIGTYHDW
Sbjct: 456 MNTVYGGFAAAVVDDPLWVMNVVSSYAANTLAVVFDRGLIGTYHDW 501
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224139094|ref|XP_002326766.1| predicted protein [Populus trichocarpa] gi|118486237|gb|ABK94960.1| unknown [Populus trichocarpa] gi|222834088|gb|EEE72565.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
| >gi|224074464|ref|XP_002304375.1| predicted protein [Populus trichocarpa] gi|222841807|gb|EEE79354.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|297800138|ref|XP_002867953.1| early-responsive to dehydration 3 [Arabidopsis lyrata subsp. lyrata] gi|297313789|gb|EFH44212.1| early-responsive to dehydration 3 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
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| >gi|225427524|ref|XP_002265127.1| PREDICTED: probable methyltransferase PMT20 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|296088461|emb|CBI37452.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|18415244|ref|NP_567575.1| putative methyltransferase PMT21 [Arabidopsis thaliana] gi|30684664|ref|NP_849408.1| putative methyltransferase PMT21 [Arabidopsis thaliana] gi|75166193|sp|Q94II3.1|PMTL_ARATH RecName: Full=Probable methyltransferase PMT21; AltName: Full=Protein EARLY-RESPONSIVE TO DEHYDRATION 3 gi|15320410|dbj|BAB63914.1| ERD3 protein [Arabidopsis thaliana] gi|222424514|dbj|BAH20212.1| AT4G19120 [Arabidopsis thaliana] gi|222424754|dbj|BAH20330.1| AT4G19120 [Arabidopsis thaliana] gi|332658745|gb|AEE84145.1| putative methyltransferase PMT21 [Arabidopsis thaliana] gi|332658746|gb|AEE84146.1| putative methyltransferase PMT21 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|227206130|dbj|BAH57120.1| AT1G31850 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|15222494|ref|NP_174468.1| putative methyltransferase PMT20 [Arabidopsis thaliana] gi|30692610|ref|NP_849736.1| putative methyltransferase PMT20 [Arabidopsis thaliana] gi|42571717|ref|NP_973949.1| putative methyltransferase PMT20 [Arabidopsis thaliana] gi|75169170|sp|Q9C6S7.1|PMTK_ARATH RecName: Full=Probable methyltransferase PMT20 gi|12321307|gb|AAG50728.1|AC079041_21 unknown protein [Arabidopsis thaliana] gi|22135826|gb|AAM91099.1| At1g31850/68069_m00154 [Arabidopsis thaliana] gi|23463061|gb|AAN33200.1| At1g31850/68069_m00154 [Arabidopsis thaliana] gi|332193284|gb|AEE31405.1| putative methyltransferase PMT20 [Arabidopsis thaliana] gi|332193285|gb|AEE31406.1| putative methyltransferase PMT20 [Arabidopsis thaliana] gi|332193286|gb|AEE31407.1| putative methyltransferase PMT20 [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|449453314|ref|XP_004144403.1| PREDICTED: probable methyltransferase PMT21-like [Cucumis sativus] gi|449524378|ref|XP_004169200.1| PREDICTED: probable methyltransferase PMT21-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 241 | ||||||
| TAIR|locus:2134756 | 600 | ERD3 "early-responsive to dehy | 0.937 | 0.376 | 0.823 | 1.3e-107 | |
| TAIR|locus:2034522 | 603 | AT1G31850 [Arabidopsis thalian | 0.937 | 0.374 | 0.801 | 6.5e-106 | |
| TAIR|locus:2127711 | 633 | AT4G10440 [Arabidopsis thalian | 0.937 | 0.357 | 0.432 | 3.1e-51 | |
| TAIR|locus:2196651 | 639 | AT1G33170 [Arabidopsis thalian | 0.946 | 0.356 | 0.412 | 3.2e-49 | |
| TAIR|locus:2050679 | 631 | AT2G45750 [Arabidopsis thalian | 0.912 | 0.348 | 0.422 | 1.1e-48 | |
| TAIR|locus:2117728 | 633 | AT4G00750 [Arabidopsis thalian | 0.917 | 0.349 | 0.415 | 6e-48 | |
| TAIR|locus:2202805 | 616 | AT1G26850 [Arabidopsis thalian | 0.917 | 0.358 | 0.400 | 5.6e-45 | |
| TAIR|locus:2041031 | 611 | AT2G43200 [Arabidopsis thalian | 0.921 | 0.363 | 0.412 | 2.8e-43 | |
| TAIR|locus:2141035 | 621 | AT4G18030 [Arabidopsis thalian | 0.908 | 0.352 | 0.417 | 9.3e-43 | |
| TAIR|locus:2145658 | 612 | AT5G14430 [Arabidopsis thalian | 0.887 | 0.349 | 0.393 | 2.9e-39 |
| TAIR|locus:2134756 ERD3 "early-responsive to dehydration 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1064 (379.6 bits), Expect = 1.3e-107, P = 1.3e-107
Identities = 187/227 (82%), Positives = 207/227 (91%)
Query: 8 GGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLY 67
GG+YLLEVHRILRPGGFWVLSGPPVNYE+RW+GW+TTIEEQRS+Y+KLQ+LL+SMCFK+Y
Sbjct: 273 GGVYLLEVHRILRPGGFWVLSGPPVNYENRWKGWDTTIEEQRSNYEKLQELLSSMCFKMY 332
Query: 68 AKKDDIAVWQKLSDSSCYNKLSN-PDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKS 126
AKKDDIAVWQK D+ CYNKLSN PD YPPKCDDSLEPDSAWYTPLRPCVVVP P LKK+
Sbjct: 333 AKKDDIAVWQKSPDNLCYNKLSNDPDAYPPKCDDSLEPDSAWYTPLRPCVVVPSPKLKKT 392
Query: 127 VLESMPKWPERLHVAPERISDIHGGSASAFKHDDSKWNVRVKHYKKLLPALGTDKIRNVM 186
LES PKWPERLH PERISD+ GG+ + FKHDDSKW R KHYKKLLPA+G+DKIRNVM
Sbjct: 393 DLESTPKWPERLHTTPERISDVPGGNGNVFKHDDSKWKTRAKHYKKLLPAIGSDKIRNVM 452
Query: 187 DMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDW 233
DMNT YGG AAA+++DPLWVMNVVSSYAANTL VV+DRGLIGTYHDW
Sbjct: 453 DMNTAYGGLAAALVNDPLWVMNVVSSYAANTLPVVFDRGLIGTYHDW 499
|
|
| TAIR|locus:2034522 AT1G31850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2127711 AT4G10440 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2196651 AT1G33170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2050679 AT2G45750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2117728 AT4G00750 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2202805 AT1G26850 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2041031 AT2G43200 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2141035 AT4G18030 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2145658 AT5G14430 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
| estExt_fgenesh4_pg.C_290313 | SubName- Full=Putative uncharacterized protein; (599 aa) | |||||||
(Populus trichocarpa) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 241 | |||
| pfam03141 | 506 | pfam03141, Methyltransf_29, Putative S-adenosyl-L- | 1e-102 |
| >gnl|CDD|217386 pfam03141, Methyltransf_29, Putative S-adenosyl-L-methionine-dependent methyltransferase | Back alignment and domain information |
|---|
Score = 306 bits (786), Expect = e-102
Identities = 113/229 (49%), Positives = 145/229 (63%), Gaps = 12/229 (5%)
Query: 8 GGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLY 67
GI LLEV R+LRPGG++VLSGPPV E+ + ++K ++ L S+C+KL
Sbjct: 198 DGILLLEVDRVLRPGGYFVLSGPPVY--------ARDEEDLQEEWKAMEALAKSLCWKLV 249
Query: 68 AKKDDIAVWQKLSDSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKSV 127
AKK DIA+WQK ++SCYNK P PP C DS +PD+AWY P+ C+ +
Sbjct: 250 AKKGDIAIWQKPVNNSCYNKRE-PGKKPPLCKDSDDPDAAWYVPMEACITPLPEVSHEVG 308
Query: 128 LESMPKWPERLHVAPERISD--IHGGSASAFKHDDSKWNVRVKHYKKLL-PALGTDKIRN 184
+ KWPERL P R++ I G SA AFK D W RV YK+LL + ++RN
Sbjct: 309 GGWLEKWPERLTAVPPRLASGQIGGVSAEAFKADTELWKRRVSKYKRLLKLLIDKGRVRN 368
Query: 185 VMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDW 233
VMDMN +GGFAAA+IDDP+WVMNVV + +TL V+YDRGLIG YHDW
Sbjct: 369 VMDMNAGFGGFAAALIDDPVWVMNVVPVDSPDTLPVIYDRGLIGIYHDW 417
|
This family is a putative S-adenosyl-L-methionine (SAM)-dependent methyltransferase. Length = 506 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 241 | |||
| PF03141 | 506 | Methyltransf_29: Putative S-adenosyl-L-methionine- | 100.0 | |
| PF03141 | 506 | Methyltransf_29: Putative S-adenosyl-L-methionine- | 95.47 | |
| PF07942 | 270 | N2227: N2227-like protein; InterPro: IPR012901 Thi | 91.56 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 84.09 |
| >PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-105 Score=770.66 Aligned_cols=231 Identities=49% Similarity=0.899 Sum_probs=223.3
Q ss_pred CccccccCcEEEEEeeceecCCcEEEEcCCCccccccccCCCccHHHHHHHHHHHHHHHHhcccceeeeecCeEEEecCC
Q 026278 1 MMNIFVSGGIYLLEVHRILRPGGFWVLSGPPVNYEHRWRGWNTTIEEQRSDYKKLQDLLTSMCFKLYAKKDDIAVWQKLS 80 (241)
Q Consensus 1 ~IpW~~~dG~~LlEvdRvLRPGGYfV~S~pPv~~k~~~~~~~~~~e~~~~e~~~~~~la~~lCW~~va~~~~~aIwqKp~ 80 (241)
.|+|+++||+||+|||||||||||||||||||| +++++++++||++|++||++|||++|++++||||||||+
T Consensus 191 ~i~W~~~~g~~l~evdRvLRpGGyfv~S~ppv~--------~r~~~~~~~~~~~~~~l~~~lCW~~va~~~~~aIwqKp~ 262 (506)
T PF03141_consen 191 LIPWHPNDGFLLFEVDRVLRPGGYFVLSGPPVY--------QRTDEDLEEEWNAMEDLAKSLCWKKVAEKGDTAIWQKPT 262 (506)
T ss_pred cccchhcccceeehhhhhhccCceEEecCCccc--------ccchHHHHHHHHHHHHHHHHHHHHHheeeCCEEEEeccC
Confidence 389999999999999999999999999999996 467889999999999999999999999999999999999
Q ss_pred CchhhcccCCCCCCCCCCCCCCCCCCccccCCCCccccCCCCCcccccCCCCCCcccccCCCccccc--ccCCChhhhhh
Q 026278 81 DSSCYNKLSNPDVYPPKCDDSLEPDSAWYTPLRPCVVVPRPNLKKSVLESMPKWPERLHVAPERISD--IHGGSASAFKH 158 (241)
Q Consensus 81 ~~~Cy~~r~~~~~~PplC~~~~dpd~aWY~~m~~Cit~~p~~~~~~~~~~~~~WP~RL~~~P~rl~~--i~g~s~e~F~~ 158 (241)
||+||.+|+. .+.||+|++++|||++||++|++|||++|+..++.+++++++||+||+++|+||++ ++|+++|+|++
T Consensus 263 ~~~Cy~~r~~-~~~pplC~~~~dpd~aWY~~l~~Cit~~p~~~~~~~~~~~~~WP~RL~~~P~rl~~~~~~g~~~e~F~~ 341 (506)
T PF03141_consen 263 NNSCYQKRKP-GKSPPLCDSSDDPDAAWYVPLEACITPLPEVSSEIAGGWLPKWPERLNAVPPRLSSGSIPGISPEEFKE 341 (506)
T ss_pred CchhhhhccC-CCCCCCCCCCCCCcchhhcchhhhcCcCCcccccccccCCCCChhhhccCchhhhcCCcCCCCHHHHHH
Confidence 9999999997 89999999899999999999999999999988889999999999999999999996 88999999999
Q ss_pred hHHHHHHHHHHHHHhcC-CCCCCCcceeccccccccchhhhccCCCceeEEeccCCCCCcccceeccccccccccccccC
Q 026278 159 DDSKWNVRVKHYKKLLP-ALGTDKIRNVMDMNTLYGGFAAAVIDDPLWVMNVVSSYAANTLAVVYDRGLIGTYHDWYILL 237 (241)
Q Consensus 159 Dt~~Wk~~V~~Y~~~l~-~l~~~~iRNVMDMnA~~GGFAAAL~~~pvWVMNVVP~~~~nTL~vIydRGLIG~yHDWCEaF 237 (241)
||++|+++|++|+++++ .|++++|||||||||+||||||||+++|||||||||+.++|||||||||||||+||||||+|
T Consensus 342 Dt~~Wk~~V~~Y~~l~~~~i~~~~iRNVMDMnAg~GGFAAAL~~~~VWVMNVVP~~~~ntL~vIydRGLIG~yhDWCE~f 421 (506)
T PF03141_consen 342 DTKHWKKRVSHYKKLLGLAIKWGRIRNVMDMNAGYGGFAAALIDDPVWVMNVVPVSGPNTLPVIYDRGLIGVYHDWCEAF 421 (506)
T ss_pred HHHHHHHHHHHHHHhhcccccccceeeeeeecccccHHHHHhccCCceEEEecccCCCCcchhhhhcccchhccchhhcc
Confidence 99999999999999886 79999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC
Q 026278 238 LFL 240 (241)
Q Consensus 238 sT~ 240 (241)
||-
T Consensus 422 sTY 424 (506)
T PF03141_consen 422 STY 424 (506)
T ss_pred CCC
Confidence 993
|
; GO: 0008168 methyltransferase activity |
| >PF03141 Methyltransf_29: Putative S-adenosyl-L-methionine-dependent methyltransferase; InterPro: IPR004159 Members of this family of hypothetical plant proteins are putative methyltransferases | Back alignment and domain information |
|---|
| >PF07942 N2227: N2227-like protein; InterPro: IPR012901 This family features sequences that are similar to a region of hypothetical yeast gene product N2227 (P53934 from SWISSPROT) | Back alignment and domain information |
|---|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
No hit with e-value below 0.005
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 241 | |||
| 2ld4_A | 176 | Anamorsin; methyltransferase-like fold, alpha/beta | 87.56 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 83.69 | |
| 2zfu_A | 215 | Nucleomethylin, cerebral protein 1; nucleolar prot | 82.44 | |
| 2a14_A | 263 | Indolethylamine N-methyltransferase; SGC,INMT, str | 82.3 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 80.82 |
| >2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A | Back alignment and structure |
|---|
Probab=87.56 E-value=0.15 Score=39.89 Aligned_cols=22 Identities=50% Similarity=0.810 Sum_probs=18.1
Q ss_pred cEEEEEeeceecCCcEEEEcCC
Q 026278 9 GIYLLEVHRILRPGGFWVLSGP 30 (241)
Q Consensus 9 G~~LlEvdRvLRPGGYfV~S~p 30 (241)
-.+|-|+-|+|||||+|+++.|
T Consensus 81 ~~~l~~~~r~LkpgG~l~~~~~ 102 (176)
T 2ld4_A 81 AEILAEIARILRPGGCLFLKEP 102 (176)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEEEcc
Confidence 4456788899999999999755
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
| >2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15 | Back alignment and structure |
|---|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 241 | |||
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 86.67 | |
| d2a14a1 | 257 | Indolethylamine N-methyltransferase, INMT {Human ( | 81.83 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 80.46 |
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=86.67 E-value=0.036 Score=45.79 Aligned_cols=18 Identities=33% Similarity=0.839 Sum_probs=16.5
Q ss_pred EEeeceecCCcEEEEcCC
Q 026278 13 LEVHRILRPGGFWVLSGP 30 (241)
Q Consensus 13 lEvdRvLRPGGYfV~S~p 30 (241)
-|+.|||||||++|++.|
T Consensus 161 ~e~~rvLkpgG~l~~~~p 178 (268)
T d1p91a_ 161 EELARVVKPGGWVITATP 178 (268)
T ss_dssp HHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHhCCCcEEEEEee
Confidence 489999999999999977
|
| >d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|