Query 026284
Match_columns 240
No_of_seqs 168 out of 1211
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 09:54:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026284.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026284hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k35_A NAD-dependent deacetyla 100.0 3.3E-37 1.1E-41 279.8 10.8 148 6-159 127-280 (318)
2 3pki_A NAD-dependent deacetyla 100.0 1.3E-36 4.4E-41 278.8 10.5 148 6-159 127-280 (355)
3 1yc5_A NAD-dependent deacetyla 100.0 9E-35 3.1E-39 255.6 12.1 138 4-150 108-245 (246)
4 1ma3_A SIR2-AF2, transcription 100.0 1.4E-33 4.7E-38 249.1 11.5 137 4-149 110-247 (253)
5 3glr_A NAD-dependent deacetyla 100.0 2.8E-33 9.7E-38 251.0 11.8 136 5-151 127-266 (285)
6 1m2k_A Silent information regu 100.0 2.2E-33 7.6E-38 247.2 10.2 134 4-149 108-241 (249)
7 4iao_A NAD-dependent histone d 100.0 5.7E-33 1.9E-37 263.1 12.7 146 5-155 287-461 (492)
8 3riy_A NAD-dependent deacetyla 100.0 2.3E-33 8E-38 250.3 9.4 139 4-145 121-272 (273)
9 2hjh_A NAD-dependent histone d 100.0 2.7E-32 9.3E-37 251.4 13.1 143 5-156 149-324 (354)
10 1s5p_A NAD-dependent deacetyla 100.0 1.7E-32 5.9E-37 239.7 9.1 132 4-149 100-231 (235)
11 1q1a_A HST2 protein; ternary c 100.0 1E-31 3.5E-36 241.3 12.3 140 5-151 124-280 (289)
12 3u31_A SIR2A, transcriptional 100.0 5.9E-32 2E-36 243.1 9.8 140 4-150 141-281 (290)
13 1q14_A HST2 protein; histone d 100.0 4E-31 1.4E-35 244.1 12.4 140 5-151 132-288 (361)
14 1j8f_A SIRT2, sirtuin 2, isofo 100.0 6.7E-31 2.3E-35 239.5 11.4 137 5-151 147-305 (323)
15 2c31_A Oxalyl-COA decarboxylas 95.1 0.061 2.1E-06 51.3 8.5 70 80-149 267-338 (568)
16 2q28_A Oxalyl-COA decarboxylas 94.2 0.12 4.1E-06 49.1 8.1 69 80-150 265-335 (564)
17 1ybh_A Acetolactate synthase, 94.2 0.13 4.6E-06 49.1 8.4 70 78-149 271-342 (590)
18 2iht_A Carboxyethylarginine sy 94.1 0.11 3.6E-06 49.7 7.4 68 79-149 281-351 (573)
19 2pgn_A Cyclohexane-1,2-dione h 93.9 0.14 4.7E-06 49.1 7.9 69 78-149 264-334 (589)
20 1ozh_A ALS, acetolactate synth 93.7 0.15 5.1E-06 48.6 7.7 67 79-149 268-336 (566)
21 4feg_A Pyruvate oxidase; carba 93.6 0.16 5.4E-06 48.9 7.7 69 78-150 269-339 (603)
22 2uz1_A Benzaldehyde lyase; thi 93.5 0.13 4.5E-06 48.9 7.0 66 83-149 267-334 (563)
23 3lq1_A 2-succinyl-5-enolpyruvy 93.5 0.16 5.5E-06 48.5 7.6 67 81-149 285-353 (578)
24 3eya_A Pyruvate dehydrogenase 93.2 0.16 5.5E-06 48.2 7.0 65 78-149 258-324 (549)
25 1q6z_A BFD, BFDC, benzoylforma 91.8 0.24 8.3E-06 46.6 6.2 71 78-149 259-330 (528)
26 2x7j_A 2-succinyl-5-enolpyruvy 91.8 0.33 1.1E-05 46.6 7.2 67 80-149 305-373 (604)
27 1v5e_A Pyruvate oxidase; oxido 91.7 0.44 1.5E-05 45.6 8.0 68 78-150 262-332 (590)
28 3hww_A 2-succinyl-5-enolpyruvy 91.5 0.29 9.8E-06 46.5 6.3 65 78-144 271-337 (556)
29 2pan_A Glyoxylate carboligase; 91.4 0.26 8.7E-06 47.4 6.0 70 78-149 286-357 (616)
30 1o97_D Electron transferring f 91.0 0.24 8.1E-06 44.5 5.0 59 86-149 260-319 (320)
31 1t9b_A Acetolactate synthase, 90.5 0.54 1.9E-05 46.0 7.4 71 79-149 350-429 (677)
32 1efv_A Electron transfer flavo 88.6 0.71 2.4E-05 41.2 6.1 60 85-149 253-313 (315)
33 1efp_A ETF, protein (electron 87.8 0.72 2.5E-05 41.0 5.6 59 85-148 248-307 (307)
34 2vk8_A Pyruvate decarboxylase 86.7 0.8 2.7E-05 43.3 5.6 68 78-149 271-338 (563)
35 1ovm_A Indole-3-pyruvate decar 85.6 1 3.4E-05 42.5 5.6 68 78-150 269-336 (552)
36 2vpz_A Thiosulfate reductase; 84.8 1.5 5.1E-05 43.2 6.6 56 83-138 197-255 (765)
37 2vbi_A Pyruvate decarboxylase; 83.7 1.2 4.2E-05 42.1 5.3 67 79-149 270-336 (566)
38 2wvg_A PDC, pyruvate decarboxy 82.8 1.2 4.2E-05 42.2 4.8 67 79-149 270-336 (568)
39 2e7z_A Acetylene hydratase AHY 82.0 0.7 2.4E-05 45.2 2.9 52 83-134 158-212 (727)
40 2vbf_A Branched-chain alpha-ke 77.9 0.99 3.4E-05 42.8 2.4 68 78-149 288-355 (570)
41 1pno_A NAD(P) transhydrogenase 73.6 2.7 9.2E-05 34.5 3.5 85 63-148 73-179 (180)
42 2nxw_A Phenyl-3-pyruvate decar 71.8 5 0.00017 37.9 5.6 68 78-149 282-349 (565)
43 1h0h_A Formate dehydrogenase ( 70.5 3.2 0.00011 42.3 4.1 56 82-137 181-238 (977)
44 1tk9_A Phosphoheptose isomeras 69.8 1.8 6.1E-05 34.3 1.7 59 80-138 105-164 (188)
45 2nap_A Protein (periplasmic ni 69.6 2.3 8E-05 41.3 2.8 56 82-137 163-222 (723)
46 3sho_A Transcriptional regulat 69.2 2.6 9E-05 33.3 2.6 62 76-137 78-140 (187)
47 2i2w_A Phosphoheptose isomeras 69.2 4.9 0.00017 32.8 4.4 58 80-137 126-184 (212)
48 1m3s_A Hypothetical protein YC 69.2 6.8 0.00023 30.9 5.1 52 82-133 76-128 (186)
49 1d4o_A NADP(H) transhydrogenas 69.1 2.7 9.1E-05 34.6 2.6 86 63-149 72-179 (184)
50 2iv2_X Formate dehydrogenase H 69.0 2.3 7.9E-05 41.4 2.6 55 82-136 163-219 (715)
51 2fsv_C NAD(P) transhydrogenase 68.9 2.9 9.9E-05 35.0 2.8 86 62-148 95-202 (203)
52 3trj_A Phosphoheptose isomeras 68.7 4.9 0.00017 32.8 4.2 59 80-138 109-171 (201)
53 4ayb_P DNA-directed RNA polyme 67.7 1.1 3.8E-05 29.1 0.0 29 17-57 2-30 (48)
54 2xbl_A Phosphoheptose isomeras 67.5 3.1 0.00011 33.2 2.7 58 81-138 112-170 (198)
55 1eu1_A Dimethyl sulfoxide redu 67.0 1.7 5.8E-05 42.8 1.2 53 82-134 174-237 (780)
56 2ivf_A Ethylbenzene dehydrogen 66.9 3.1 0.00011 42.3 3.2 55 83-137 244-300 (976)
57 1djl_A Transhydrogenase DIII; 66.6 14 0.00048 30.9 6.5 87 62-149 94-202 (207)
58 3cf4_G Acetyl-COA decarboxylas 66.5 3.3 0.00011 33.0 2.7 63 81-149 103-168 (170)
59 2k5c_A Uncharacterized protein 64.5 4.1 0.00014 29.5 2.5 62 16-85 6-80 (95)
60 2yva_A DNAA initiator-associat 63.9 4.8 0.00016 32.1 3.2 59 80-138 104-166 (196)
61 1ti6_A Pyrogallol hydroxytrans 62.9 2 7E-05 42.9 0.9 53 82-134 205-265 (875)
62 3qrl_A Transcription initiatio 62.6 8.9 0.0003 30.3 4.4 50 178-227 33-84 (140)
63 1kqf_A FDH-N alpha, formate de 61.6 3.2 0.00011 42.4 2.0 54 82-135 219-275 (1015)
64 1q16_A Respiratory nitrate red 61.3 2.2 7.5E-05 44.9 0.8 54 82-135 243-298 (1247)
65 2bru_C NAD(P) transhydrogenase 60.0 2.3 7.8E-05 35.1 0.5 85 63-148 80-186 (186)
66 3c2q_A Uncharacterized conserv 58.3 4.5 0.00016 36.4 2.2 83 58-149 245-339 (345)
67 1x92_A APC5045, phosphoheptose 58.0 3.1 0.00011 33.4 1.1 58 81-138 109-170 (199)
68 3a43_A HYPD, hydrogenase nicke 56.7 3.4 0.00012 32.4 1.0 17 16-32 68-84 (139)
69 3i9v_3 NADH-quinone oxidoreduc 55.0 9.7 0.00033 37.7 4.2 28 110-137 443-470 (783)
70 1tmo_A TMAO reductase, trimeth 54.6 4 0.00014 40.4 1.4 52 83-134 208-274 (829)
71 2xhz_A KDSD, YRBH, arabinose 5 54.4 4.9 0.00017 31.6 1.6 55 82-136 93-148 (183)
72 3rls_A YAF9, protein AF-9 homo 53.6 20 0.00067 29.4 5.1 54 175-229 30-83 (175)
73 1jeo_A MJ1247, hypothetical pr 52.0 10 0.00036 29.6 3.3 53 82-135 79-132 (180)
74 2kdx_A HYPA, hydrogenase/ureas 51.5 7.7 0.00026 29.2 2.3 27 17-59 72-99 (119)
75 1vim_A Hypothetical protein AF 51.4 3.2 0.00011 33.6 0.1 55 82-136 86-141 (200)
76 3fxa_A SIS domain protein; str 51.1 5.8 0.0002 31.8 1.6 54 82-135 89-143 (201)
77 3szu_A ISPH, 4-hydroxy-3-methy 50.1 14 0.00048 33.2 4.0 74 75-149 215-295 (328)
78 3ml1_A NAPA, periplasmic nitra 48.6 11 0.00038 37.4 3.5 67 82-148 175-248 (802)
79 2f62_A Nucleoside 2-deoxyribos 46.9 56 0.0019 25.9 6.8 73 74-149 56-159 (161)
80 3dnf_A ISPH, LYTB, 4-hydroxy-3 46.4 14 0.00048 32.7 3.4 87 62-149 184-279 (297)
81 3etn_A Putative phosphosugar i 44.0 9.3 0.00032 31.5 1.8 55 81-135 102-159 (220)
82 1twf_L ABC10-alpha, DNA-direct 43.0 15 0.00053 25.4 2.5 27 17-58 27-53 (70)
83 3os4_A Naprtase, nicotinate ph 41.6 26 0.00088 32.3 4.5 82 64-152 310-396 (407)
84 1ytl_A Acetyl-COA decarboxylas 41.3 7.3 0.00025 31.6 0.7 36 84-121 107-144 (174)
85 3cvj_A Putative phosphoheptose 39.5 11 0.00036 31.4 1.5 52 83-134 106-169 (243)
86 1vlp_A Naprtase, nicotinate ph 39.0 30 0.001 32.1 4.6 86 64-157 335-433 (441)
87 4hl7_A Naprtase, nicotinate ph 39.0 25 0.00084 32.9 4.0 81 64-151 320-413 (446)
88 3jy6_A Transcriptional regulat 38.9 1.5E+02 0.0052 23.8 8.9 58 84-149 62-119 (276)
89 1e8j_A Rubredoxin; iron-sulfur 37.1 16 0.00054 23.8 1.7 14 17-30 2-15 (52)
90 3h0g_L DNA-directed RNA polyme 36.8 24 0.00082 24.0 2.6 28 17-59 20-47 (63)
91 3na7_A HP0958; flagellar bioge 36.7 25 0.00086 29.8 3.4 48 7-72 192-239 (256)
92 4rxn_A Rubredoxin; electron tr 36.3 34 0.0012 22.5 3.3 14 17-30 2-15 (54)
93 4fyk_A Deoxyribonucleoside 5'- 36.2 39 0.0013 26.8 4.3 47 73-120 56-102 (152)
94 3h75_A Periplasmic sugar-bindi 35.5 1.3E+02 0.0045 25.3 8.0 73 73-148 47-133 (350)
95 3oy2_A Glycosyltransferase B73 34.8 94 0.0032 26.7 7.0 79 64-149 255-354 (413)
96 2khz_A C-MYC-responsive protei 34.8 91 0.0031 24.4 6.3 74 75-150 67-151 (165)
97 1dx8_A Rubredoxin; electron tr 34.4 15 0.0005 25.5 1.3 16 15-30 4-19 (70)
98 3fro_A GLGA glycogen synthase; 34.0 1.3E+02 0.0045 25.6 7.8 82 63-150 311-395 (439)
99 1nri_A Hypothetical protein HI 33.5 12 0.00043 32.5 1.0 54 82-135 137-191 (306)
100 2epq_A POZ-, at HOOK-, and zin 33.3 48 0.0016 18.9 3.5 42 11-57 4-45 (45)
101 1g8k_A Arsenite oxidase; molyb 31.8 31 0.001 34.1 3.6 49 82-130 221-288 (825)
102 2v3b_B Rubredoxin 2, rubredoxi 31.5 16 0.00056 24.0 1.1 14 17-30 2-15 (55)
103 2kn9_A Rubredoxin; metalloprot 31.2 20 0.00068 25.7 1.6 15 16-30 25-39 (81)
104 2f9f_A First mannosyl transfer 30.9 60 0.0021 24.7 4.6 82 62-150 78-162 (177)
105 2a3n_A Putative glucosamine-fr 30.1 23 0.00079 31.3 2.2 54 83-136 100-154 (355)
106 3k4h_A Putative transcriptiona 30.0 2.2E+02 0.0074 22.9 8.8 37 84-124 68-104 (292)
107 3hba_A Putative phosphosugar i 29.8 36 0.0012 29.9 3.4 53 83-135 88-141 (334)
108 3egc_A Putative ribose operon 28.9 2.3E+02 0.0078 22.8 8.8 36 84-123 63-98 (291)
109 3tb6_A Arabinose metabolism tr 28.6 1.9E+02 0.0065 23.2 7.6 40 84-123 70-110 (298)
110 4g9i_A Hydrogenase maturation 28.5 80 0.0027 31.4 5.9 44 45-94 175-221 (772)
111 2im5_A Nicotinate phosphoribos 27.1 62 0.0021 29.5 4.5 77 65-150 302-391 (394)
112 1yk4_A Rubredoxin, RD; electro 26.9 26 0.0009 22.7 1.5 13 18-30 2-14 (52)
113 3jx9_A Putative phosphoheptose 26.8 24 0.00083 28.4 1.5 43 82-124 74-117 (170)
114 3dma_A Exopolyphosphatase-rela 26.1 3.3E+02 0.011 23.8 9.4 75 78-154 84-164 (343)
115 2aml_A SIS domain protein; 469 25.9 37 0.0013 30.2 2.8 53 83-135 95-149 (373)
116 1s24_A Rubredoxin 2; electron 25.7 20 0.00069 26.0 0.8 15 16-30 33-47 (87)
117 3knz_A Putative sugar binding 25.7 30 0.001 30.9 2.1 52 83-134 95-147 (366)
118 3g68_A Putative phosphosugar i 24.7 31 0.0011 30.5 2.0 50 85-134 82-132 (352)
119 6rxn_A Rubredoxin; electron tr 23.9 54 0.0018 20.8 2.5 15 16-30 2-16 (46)
120 3huu_A Transcription regulator 23.7 2.9E+02 0.01 22.5 8.0 35 84-122 82-116 (305)
121 2h1q_A Hypothetical protein; Z 23.6 34 0.0012 29.6 2.0 69 78-147 179-254 (270)
122 3vth_A Hydrogenase maturation 23.4 1E+02 0.0035 30.6 5.6 39 112-150 280-323 (761)
123 1moq_A Glucosamine 6-phosphate 23.0 28 0.00094 30.9 1.3 53 83-135 97-151 (368)
124 8abp_A L-arabinose-binding pro 22.8 2.5E+02 0.0084 22.7 7.3 36 84-121 56-91 (306)
125 2zj3_A Glucosamine--fructose-6 22.6 27 0.00092 31.2 1.1 53 83-135 105-158 (375)
126 3fj1_A Putative phosphosugar i 22.3 31 0.0011 30.4 1.5 53 83-135 89-142 (344)
127 2gmg_A Hypothetical protein PF 22.2 59 0.002 24.3 2.8 27 17-58 66-92 (105)
128 3gv0_A Transcriptional regulat 22.0 3.1E+02 0.011 22.0 8.7 36 84-123 65-100 (288)
129 1j5x_A Glucosamine-6-phosphate 21.9 25 0.00085 30.9 0.7 51 84-134 98-150 (342)
130 3m9w_A D-xylose-binding peripl 21.5 3.3E+02 0.011 22.1 9.6 62 84-149 57-118 (313)
131 3c48_A Predicted glycosyltrans 20.9 2E+02 0.007 24.6 6.6 69 78-149 318-390 (438)
132 2poc_A D-fructose-6- PH, isome 20.9 30 0.001 30.7 1.0 54 83-136 95-149 (367)
133 3sho_A Transcriptional regulat 20.9 60 0.002 25.1 2.8 50 70-119 23-72 (187)
134 3eua_A Putative fructose-amino 20.7 30 0.001 30.2 1.1 52 83-134 72-124 (329)
135 2h0a_A TTHA0807, transcription 20.7 2.6E+02 0.0089 22.2 6.9 56 84-148 54-109 (276)
136 2lv2_A Insulinoma-associated p 20.1 82 0.0028 21.8 3.1 49 5-58 16-64 (85)
No 1
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding domain, structural genomics, struc genomics consortium, SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=279.83 Aligned_cols=148 Identities=40% Similarity=0.620 Sum_probs=128.9
Q ss_pred CCeEEecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCC------CCCCCcccccEEEcCCCCChhhHHHH
Q 026284 6 ICVLEYQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSD------VKCGSRLKDTVLDWEDALPPVEMNPA 79 (240)
Q Consensus 6 ~kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~------~~CgG~LRP~IV~FGE~lp~~~l~~a 79 (240)
++|+|+|| |+++++|+.|++.|+.+.+... ...+.+++.|+. ..|||.|||+||||||.+|++.++.|
T Consensus 127 ~~VielHG-sl~~~~C~~C~~~~~~~~~~~~-----~~~~p~~~~C~~~~~~~c~~CgG~LRPdVV~FGE~lP~~~~~~a 200 (318)
T 3k35_A 127 DKLAELHG-NMFVEECAKCKTQYVRDTVVGT-----MGLKATGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDLALA 200 (318)
T ss_dssp GGEEETTC-CTTEEEETTTCCEEECSSCCSC-----CSSCEEEEECCC--------CCCEEEECCCCTTCCCCHHHHHHH
T ss_pred cCEEEeCC-CCCeeEeCCCCCccchHHhhhh-----cccCCCCCcCcccccccccCcCCeeCCCEEEccCcCCHHHHHHH
Confidence 68999999 9999999999998775432211 111122345531 16999999999999999999999999
Q ss_pred HHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhcccCCCCccCC
Q 026284 80 EENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVD 159 (240)
Q Consensus 80 ~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg~~iP~~~~~~ 159 (240)
.+++++||++|||||||+|+|+++|+..++++|+++++||+++|+.|+.+|++|+|+++++|++|+++|||+||+|+..+
T Consensus 201 ~~~~~~aDllLViGTSL~V~Paa~l~~~a~~~G~~vviIN~~~t~~d~~adl~i~g~~~evl~~L~~~Lg~~iP~~~~~~ 280 (318)
T 3k35_A 201 DEASRNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPTKHDRHADLRIHGYVDEVMTRLMKHLGLEIPAWDGPR 280 (318)
T ss_dssp HHHHHTCSEEEEESCCCCSTTGGGHHHHHHHTTCEEEEECSSCCTTGGGCSEEECSCHHHHHHHHHHHHTCCCCCCCSCB
T ss_pred HHHHhcCCEEEEEccCCCchhhhhhHHHHHhcCCEEEEECCCCCCCCCcccEEEeCCHHHHHHHHHHHhCCCCCCCCCCc
Confidence 99999999999999999999999999989999999999999999999999999999999999999999999999999865
No 2
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural genomics, structural genomics consortium, SGC, hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Probab=100.00 E-value=1.3e-36 Score=278.77 Aligned_cols=148 Identities=40% Similarity=0.614 Sum_probs=129.1
Q ss_pred CCeEEecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCC------CCCCCcccccEEEcCCCCChhhHHHH
Q 026284 6 ICVLEYQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSD------VKCGSRLKDTVLDWEDALPPVEMNPA 79 (240)
Q Consensus 6 ~kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~------~~CgG~LRP~IV~FGE~lp~~~l~~a 79 (240)
++|+|||| |++.++|+.|++.|..+.+... ...+.+++.|+. ..|||.|||+||||||.+|++.++.|
T Consensus 127 ~~VieLHG-sl~~~~C~~C~~~~~~~~~~~~-----~~~~~~~~~C~~~~~~~~~~CgG~LRPdVV~FGE~lP~~~~~~A 200 (355)
T 3pki_A 127 DKLAELHG-NMFVEECAKCKTQYVRDTVVGT-----MGLKATGRLCTVAKARGLRACRGELRDTILDWEDSLPDRDLALA 200 (355)
T ss_dssp GGEEETTC-CTTEEEETTTCCEEEBSSCCSC-----CSSCEEEEECCCCCBTTBCCCCCEEEECCCCTTSCCCHHHHHHH
T ss_pred ccEEEeCC-CCCceeeCCCCCccchHHhhhh-----cccCCCCCccccccccccccCCCccCCCEEECCCcCCHHHHHHH
Confidence 68999999 9999999999998775432211 111112334531 17999999999999999999999999
Q ss_pred HHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhcccCCCCccCC
Q 026284 80 EENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLNLWIPPYVRVD 159 (240)
Q Consensus 80 ~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg~~iP~~~~~~ 159 (240)
.+++++|||+|||||||+|+|+++|+..++++|+++|+||+++|+.|..+|++|+|+|+++|++|+++|||+||+|+..+
T Consensus 201 ~~~~~~aDllLViGTSL~V~Paa~Lp~~a~~~G~~vviIN~~pT~~d~~adl~i~g~a~evl~~L~~~Lg~~iP~~~~~~ 280 (355)
T 3pki_A 201 DEASRNADLSITLGTSLQIRPSGNLPLATKRRGGRLVIVNLQPTKHDRHADLRIHGYVDEVMTRLMEHLGLEIPAWDGPR 280 (355)
T ss_dssp HHHHHHCSEEEEESCCCCSTTGGGTTHHHHHTTCEEEEECSSCCTTGGGCSEEECSCHHHHHHHHHHHTTCCCCCCCSCE
T ss_pred HHHHhcCCEEEEEeeCCCchhhhhhHHHHHhcCCEEEEECCCCCCCCCccCEEEeCCHHHHHHHHHHHhCCCCCCCCCCc
Confidence 99999999999999999999999999999899999999999999999999999999999999999999999999998755
No 3
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1, nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A* 2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A* 2h4h_A* 3jr3_A* 2h59_A*
Probab=100.00 E-value=9e-35 Score=255.61 Aligned_cols=138 Identities=29% Similarity=0.447 Sum_probs=127.1
Q ss_pred CCCCeEEecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCCcccccEEEcCCCCChhhHHHHHHHh
Q 026284 4 ACICVLEYQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEENC 83 (240)
Q Consensus 4 ~~~kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG~LRP~IV~FGE~lp~~~l~~a~~~~ 83 (240)
|+++|+|+|| |++.++|+.|++.|+.++...... ....|+|+ .|||.|||+||||||.+|++.+++|.+++
T Consensus 108 G~~~v~elHG-~~~~~~C~~C~~~~~~~~~~~~~~------~~~~p~C~--~Cgg~lrP~vv~FgE~lp~~~~~~a~~~~ 178 (246)
T 1yc5_A 108 GSKKVIELHG-NVEEYYCVRCEKKYTVEDVIKKLE------SSDVPLCD--DCNSLIRPNIVFFGENLPQDALREAIGLS 178 (246)
T ss_dssp TCSCEEETTE-EEEEEEETTTCCEEEHHHHHHHTT------TCSSCBCT--TTCCBEEEEECCBTSBCCHHHHHHHHHHH
T ss_pred CCCcEEEecC-ccceeEcCCCCCCCcHHHHHHHhc------cCCCCCCC--CCCCccCcceEECCCCCCHHHHHHHHHHH
Confidence 6799999999 999999999999988766543221 22579999 89999999999999999999999999999
Q ss_pred ccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhcc
Q 026284 84 RMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLNL 150 (240)
Q Consensus 84 ~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg~ 150 (240)
++||++|||||||+|+|+++|+..++++|+++|+||+++|+.|..+++.|+|+++++|++|+++||+
T Consensus 179 ~~adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~IN~~~~~~d~~~~~~i~~~~~~~l~~l~~~lg~ 245 (246)
T 1yc5_A 179 SRASLMIVLGSSLVVYPAAELPLITVRSGGKLVIVNLGETPFDDIATLKYNMDVVEFARRVMEEGGI 245 (246)
T ss_dssp HHCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEECSSCCTTGGGCSEEECSCHHHHHHHHHHHHTC
T ss_pred hcCCEEEEECCCCcchhHHHHHHHHHHcCCeEEEEeCCCCCCCcceeEEEeCCHHHHHHHHHHHcCC
Confidence 9999999999999999999999988888999999999999999999999999999999999999997
No 4
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family; enzyme-substrate complex, protein binding, transcription; HET: ALY MES; 2.00A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Probab=100.00 E-value=1.4e-33 Score=249.06 Aligned_cols=137 Identities=26% Similarity=0.446 Sum_probs=124.8
Q ss_pred CCCCeEEecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCC-cccccEEEcCCCCChhhHHHHHHH
Q 026284 4 ACICVLEYQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGS-RLKDTVLDWEDALPPVEMNPAEEN 82 (240)
Q Consensus 4 ~~~kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG-~LRP~IV~FGE~lp~~~l~~a~~~ 82 (240)
|+++|+|+|| +++.++|+.|++.|+.+++..... ....|+|+ .||| .|||+||||||.+|++.++.|.++
T Consensus 110 G~~~v~elHG-~~~~~~C~~C~~~~~~~~~~~~~~------~~~~p~C~--~Cgg~~lrP~Vv~FgE~lp~~~~~~a~~~ 180 (253)
T 1ma3_A 110 GSRRVLELHG-SMDKLDCLDCHETYDWSEFVEDFN------KGEIPRCR--KCGSYYVKPRVVLFGEPLPQRTLFEAIEE 180 (253)
T ss_dssp TCCSEEETTE-EEEEEEETTTCCEEEGGGTHHHHH------TTCCCCCT--TTCCSCEEEEECCBTSBCCHHHHHHHHHH
T ss_pred CCCCEEEeCC-CcCeeeeCCCCCcCcHHHHHHHhc------cCCCCCCC--CCCCccccceEEEeCCCCCHHHHHHHHHH
Confidence 6789999999 999999999999988765543221 22479999 8999 999999999999999999999999
Q ss_pred hccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhc
Q 026284 83 CRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg 149 (240)
+++||++|||||||+|+|+++|+..++++|+++|+||+++|+.|..+++.|+|+++++|++|++.|.
T Consensus 181 ~~~adl~lviGTSl~V~P~~~l~~~a~~~g~~~i~iN~~~~~~d~~~~~~i~~~~~~~l~~l~~~l~ 247 (253)
T 1ma3_A 181 AKHCDAFMVVGSSLVVYPAAELPYIAKKAGAKMIIVNAEPTMADPIFDVKIIGKAGEVLPKIVEEVK 247 (253)
T ss_dssp HHHCSEEEEESCCSCEETGGGHHHHHHHHTCEEEEEESSCCTTGGGCSEEEESCHHHHHHHHHHHHH
T ss_pred HHhCCEEEEECCCceeccHHHHHHHHHHcCCeEEEEeCCCCCCCCceeEEEeCCHHHHHHHHHHHHH
Confidence 9999999999999999999999998888899999999999999999999999999999999999874
No 5
>3glr_A NAD-dependent deacetylase sirtuin-3, mitochondria; NAD dependent deacetylase, sirtuin, substrate peptide comple hydrolase, metal-binding; HET: ALY; 1.80A {Homo sapiens} PDB: 3gls_A 3glt_A* 3glu_A 4hd8_A* 4fvt_A*
Probab=100.00 E-value=2.8e-33 Score=251.04 Aligned_cols=136 Identities=19% Similarity=0.251 Sum_probs=119.7
Q ss_pred CCCeEEecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCCcccccEEEcCCCCChhhHHHHHHHhc
Q 026284 5 CICVLEYQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEENCR 84 (240)
Q Consensus 5 ~~kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG~LRP~IV~FGE~lp~~~l~~a~~~~~ 84 (240)
+++|+|+|| |+++++|+.|++.|+.+++..... ....|+|+ .|||.|||+||||||.+|++.+ .+.+.+.
T Consensus 127 ~~~VielHG-s~~~~~C~~C~~~~~~~~~~~~i~------~~~~P~C~--~Cgg~lrP~IV~FGE~lp~~~~-~~~~~~~ 196 (285)
T 3glr_A 127 ASKLVEAHG-TFASATCTVCQRPFPGEDIRADVM------ADRVPRCP--VCTGVVKPDIVFFGEPLPQRFL-LHVVDFP 196 (285)
T ss_dssp GGGEEETTE-EEEEEEETTTCCEEEGGGGHHHHH------TTCCCBCT--TTCCBEEEEECCTTSBCCGGGG-GHHHHHH
T ss_pred cccEEEecC-CCCeEEECCCCCcCCHHHHHHHhh------cCCCCCCC--CCCCccCCcEEEeCCcCCHHHH-HHHHHHh
Confidence 689999999 999999999999988765433221 24579999 8999999999999999999766 5678889
Q ss_pred cCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCC----CCCcccEEEECcHHHHHHHHHHHhccc
Q 026284 85 MADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTP----KDKKASLVVHAPVDKVIAGVMRHLNLW 151 (240)
Q Consensus 85 ~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~----~d~~adl~I~g~~devl~~L~~~Lg~~ 151 (240)
+|||+|||||||+|+|++.|+..+ +.|+++|+||++++. .+..+|+.+.|+|++++++|++.|||+
T Consensus 197 ~aDlllviGTSl~V~Paa~l~~~~-~~~~~~v~IN~~~~~~~~~~~~~~d~~~~g~~~~~~~~L~~~lgw~ 266 (285)
T 3glr_A 197 MADLLLILGTSLEVEPFASLTEAV-RSSVPRLLINRDLVGPLAWHPRSRDVAQLGDVVHGVESLVELLGWT 266 (285)
T ss_dssp HCSEEEEESCCCCEETTGGGGGSS-CTTSCEEEEESSCCTHHHHSCCTTEEEEESCHHHHHHHHHHHHTCH
T ss_pred cCCEEEEeCCCCccccHHHHHHHH-hCCCcEEEECCCCcCccccCCCCccEEEcCCHHHHHHHHHHHhCCH
Confidence 999999999999999999999754 567899999999996 567899999999999999999999995
No 6
>1m2k_A Silent information regulator 2; protein-ligand complex, gene regulation; HET: APR; 1.47A {Archaeoglobus fulgidus} SCOP: c.31.1.5 PDB: 1m2g_A* 1m2h_A* 1m2j_A* 1m2n_A* 1ici_A*
Probab=100.00 E-value=2.2e-33 Score=247.23 Aligned_cols=134 Identities=26% Similarity=0.392 Sum_probs=122.6
Q ss_pred CCCCeEEecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCCcccccEEEcCCCCChhhHHHHHHHh
Q 026284 4 ACICVLEYQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEENC 83 (240)
Q Consensus 4 ~~~kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG~LRP~IV~FGE~lp~~~l~~a~~~~ 83 (240)
|+++|+|+|| ++..++|+.|++.|+.++. + .....|+|+ .|||.|||+||||||.+|++.+++|.+++
T Consensus 108 G~~~v~elHG-~~~~~~C~~C~~~~~~~~~--------~-~~~~~p~C~--~Cgg~lrP~Vv~FgE~lp~~~~~~a~~~~ 175 (249)
T 1m2k_A 108 GSRNVIHLHG-SLRVVRCTSCNNSFEVESA--------P-KIPPLPKCD--KCGSLLRPGVVWAGEMLPPDVLDRAMREV 175 (249)
T ss_dssp TCCSEEETTE-EEEEEEESSSSCEEECSSC--------C-CSSSCCBCS--SSSSBEEEEECCTTSCCCHHHHHHHHHHH
T ss_pred CCCcEEEecC-CcceeEeCCCCCcccchhh--------c-cCCCCCCCC--CCCCCcCCeEEecCCCCCHHHHHHHHHHH
Confidence 6799999999 9999999999998775431 1 112479999 89999999999999999999999999999
Q ss_pred ccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhc
Q 026284 84 RMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 84 ~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg 149 (240)
++||++|||||||+|+|+++|+..++++|+++|+||+++|+.|..+++.|+|+++++|++|++.|.
T Consensus 176 ~~adlllviGTSl~V~P~~~l~~~a~~~g~~~i~IN~~~~~~d~~~~~~i~~~~~~~l~~l~~~l~ 241 (249)
T 1m2k_A 176 ERADVIIVAGTSAVVQPAASLPLIVKQRGGAIIEINPDETPLTPIADYSLRGKAGEVMDELVRHVR 241 (249)
T ss_dssp HHCSEEEEESCCSCSTTGGGHHHHHHHTTCEEEEECSSCCTTGGGCSEEECSCHHHHHHHHHHHHH
T ss_pred hcCCEEEEEccCCCccchHHHHHHHHHcCCeEEEEeCCCCCCCcceeEEEeCCHHHHHHHHHHHHH
Confidence 999999999999999999999998888999999999999999999999999999999999998874
No 7
>4iao_A NAD-dependent histone deacetylase SIR2; protein complex, deacetylase, nucleus, hydrolase-trans complex; HET: APR; 2.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-33 Score=263.05 Aligned_cols=146 Identities=17% Similarity=0.197 Sum_probs=122.0
Q ss_pred CCCeEEecccccccceecCCCcccchHHHHhhhh---hhh---cc-----------------------CcCCCCCCCCCC
Q 026284 5 CICVLEYQGRNLLSCTAILFEKFAHLVEYMRDFE---IET---IG-----------------------MKKTPRRCSDVK 55 (240)
Q Consensus 5 ~~kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~---~~~---~~-----------------------~~~~~p~C~~~~ 55 (240)
+++|+|+|| |++.++|+.|++.++.+++..... .+. .+ .....+.|. .
T Consensus 287 s~~ViELHG-sl~~~~C~~Cg~~~~~e~i~~~i~~~~~P~Cp~Cg~~~~~~~~~~~~~~dg~~~~~~~~~~~~~~c~--~ 363 (492)
T 4iao_A 287 TDKLVQCHG-SFATATCVTCHWNLPGERIFNKIRNLELPLCPYCYKKRREYFPEGYNNKVGVAASQGSMSERPPYIL--N 363 (492)
T ss_dssp TTTEEETTC-CTTEEEETTTCCEEEGGGGHHHHHTTCCCBCTTTHHHHHHHSTTCCCCC--------CCTTCCTTCC--T
T ss_pred hhhEEeecC-ccceeecCCCCCcCCHHHHHHHHhccCCCCCcccccccccccccccccccccccccccccccccccc--c
Confidence 579999999 999999999999888654432211 100 00 011235565 6
Q ss_pred CCCcccccEEEcCCCCChhhHHHHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEEC
Q 026284 56 CGSRLKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHA 135 (240)
Q Consensus 56 CgG~LRP~IV~FGE~lp~~~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g 135 (240)
|||.|||+||||||.+|++.++.+.+.+++|||+|||||||+|+|+++|+..+ +.|+++|+||+++|+.+ .+|+.|.|
T Consensus 364 cgG~LRPdIVfFGE~LP~~~~~~a~~~~~~aDLlLVIGTSL~VyPaA~Lv~~a-~~~~p~ViIN~ept~~~-~~Dl~l~G 441 (492)
T 4iao_A 364 SYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGTSLKVAPVSEIVNMV-PSHVPQVLINRDPVKHA-EFDLSLLG 441 (492)
T ss_dssp TTTBEEESSCCBTSBCCHHHHHHHHHHTTTCSEEEEESCCCCEETGGGHHHHS-BTTSCEEEEESSCCTTS-CCSEEEES
T ss_pred CCCcCCCCEEECCCCCCHHHHHHHHHHHhhCCEEEEeccCCCccchhhHHHHH-hcCCcEEEEcCCCCCCC-CccEEEeC
Confidence 88999999999999999998999999999999999999999999999999865 47789999999999864 58999999
Q ss_pred cHHHHHHHHHHHhcccCCCC
Q 026284 136 PVDKVIAGVMRHLNLWIPPY 155 (240)
Q Consensus 136 ~~devl~~L~~~Lg~~iP~~ 155 (240)
+||+++++|+++|||+||+-
T Consensus 442 ~cdevv~~L~~~LGw~ip~~ 461 (492)
T 4iao_A 442 YCDDIAAMVAQKCGWTIPHK 461 (492)
T ss_dssp CHHHHHHHHHHHTTCCCCST
T ss_pred CHHHHHHHHHHHhCCCCChH
Confidence 99999999999999999973
No 8
>3riy_A NAD-dependent deacetylase sirtuin-5; desuccinylase, demalonylase, posttranslational modification, binding domain, rossmann fold domain; HET: SLL NAD; 1.55A {Homo sapiens} SCOP: c.31.1.5 PDB: 3rig_A* 4f4u_A* 4f56_A* 4hda_A* 2b4y_A* 2nyr_A* 4g1c_A*
Probab=100.00 E-value=2.3e-33 Score=250.25 Aligned_cols=139 Identities=18% Similarity=0.277 Sum_probs=118.3
Q ss_pred CCCCeEEecccccccceecCCCcccchHH-----HHhhh-----hhhh-ccCcCCCCCC--CCCCCCCcccccEEEcCCC
Q 026284 4 ACICVLEYQGRNLLSCTAILFEKFAHLVE-----YMRDF-----EIET-IGMKKTPRRC--SDVKCGSRLKDTVLDWEDA 70 (240)
Q Consensus 4 ~~~kViElHG~sl~~~~C~~C~~~~~~~e-----y~r~~-----~~~~-~~~~~~~p~C--~~~~CgG~LRP~IV~FGE~ 70 (240)
|+++|+|+|| |++.++|+.|++.++..+ .+... +... .-.....|+| + .|||.|||+||||||.
T Consensus 121 G~~~vielHG-~~~~~~C~~C~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~P~C~~~--~Cgg~lrP~VV~FGE~ 197 (273)
T 3riy_A 121 GTKNLLEIHG-SLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQDASIPVEKLPRCEEA--GCGGLLRPHVVWFGEN 197 (273)
T ss_dssp TCCSEEETTE-EEEEEEETTTCCEEECCCSSSSGGGTTCCCCSTTCCCCCCCGGGSCBCCGG--GCCCBEEEEECCTTSB
T ss_pred CCCCEEEecC-cCCeeEcCCCCCcccccccchhhhhhcccCCcccccccccccCCCCCCCCC--CCCCeeCCcEEEeCCc
Confidence 6799999999 999999999999875321 11000 0000 0012357899 6 7999999999999999
Q ss_pred CChhhHHHHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHH
Q 026284 71 LPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVM 145 (240)
Q Consensus 71 lp~~~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~ 145 (240)
+|++.+++|.+++++|||+|||||||+|+|+++|+..++++|+++|+||+++|+.|..+++.|+|+++++|++|+
T Consensus 198 lp~~~~~~a~~~~~~aDl~lviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t~~d~~~~~~i~g~~~~~l~~l~ 272 (273)
T 3riy_A 198 LDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFNTETTPATNRFRFHFQGPCGTTLPEAL 272 (273)
T ss_dssp CCHHHHHHHHHHHHHCSEEEEESCCSCEETGGGHHHHHHHTTCCEEEEESSCCTTGGGSSEEEESCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHhcCCEEEEEeeCCcchhHHHhHHHHHHCCCEEEEECCCCCCCCcceeEEEeCCHHHHHHHHh
Confidence 999999999999999999999999999999999998888899999999999999999999999999999999886
No 9
>2hjh_A NAD-dependent histone deacetylase SIR2; protein, sirtuin, acetyl-ADP-ribose, nicotinamide, hydrolase; HET: XYQ; 1.85A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.7e-32 Score=251.36 Aligned_cols=143 Identities=17% Similarity=0.199 Sum_probs=122.2
Q ss_pred CCCeEEecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCC-------------------------------
Q 026284 5 CICVLEYQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSD------------------------------- 53 (240)
Q Consensus 5 ~~kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~------------------------------- 53 (240)
+++|+|+|| |++.++|+.|+..++.+++..... ....|.|+.
T Consensus 149 ~~~vielHG-sl~~~~C~~C~~~~~~~~~~~~~~------~~~~P~Cp~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (354)
T 2hjh_A 149 TDKLVQCHG-SFATATCVTCHWNLPGERIFNKIR------NLELPLCPYCYKKRREYFPEGYNNKVGVAASQGSMSERPP 221 (354)
T ss_dssp TTTEEETTE-EEEEEEETTTCCEEEGGGGHHHHH------TTCCCBCTTTHHHHHHHCCC-----------------CCT
T ss_pred ccCEEEecC-CcCccccCCCCCcCCHHHHHHHhh------ccCCCcCccccccccccccccccccccccccccccccccc
Confidence 479999999 999999999999887655433221 112455541
Q ss_pred --CCCCCcccccEEEcCCCCChhhHHHHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccE
Q 026284 54 --VKCGSRLKDTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASL 131 (240)
Q Consensus 54 --~~CgG~LRP~IV~FGE~lp~~~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl 131 (240)
..|+|.|||+||||||.+|++.++.+.+++++||++|||||||+|+|+++|+..+ +.|+++|+||+++|..+ .+++
T Consensus 222 ~~~~c~g~lrPdVV~FGE~lp~~~~~~a~~~~~~aDllLviGTSL~V~Paa~lv~~~-~~~~~~v~IN~~~t~~~-~~dl 299 (354)
T 2hjh_A 222 YILNSYGVLKPDITFFGEALPNKFHKSIREDILECDLLICIGTSLKVAPVSEIVNMV-PSHVPQVLINRDPVKHA-EFDL 299 (354)
T ss_dssp TSCTTTTBEEEEECCBTSBCCHHHHHHHHHHTTTCCEEEEESCCCCEETGGGHHHHS-CTTSCEEEEESSCCTTS-CCSE
T ss_pred cccccCCeeCCChhhccccCCHHHHHHHHHHHhhCCEEEEECcCCCchhHHHHHHHH-hcCCcEEEEcCCCCCCC-CcCE
Confidence 1467999999999999999988999999999999999999999999999999866 46889999999999865 5899
Q ss_pred EEECcHHHHHHHHHHHhcccCCCCc
Q 026284 132 VVHAPVDKVIAGVMRHLNLWIPPYV 156 (240)
Q Consensus 132 ~I~g~~devl~~L~~~Lg~~iP~~~ 156 (240)
.|+|+|+++|++|++.|||+||.+.
T Consensus 300 ~i~g~~~~vl~~L~~~lgw~~p~~~ 324 (354)
T 2hjh_A 300 SLLGYCDDIAAMVAQKCGWTIPHKK 324 (354)
T ss_dssp EEESCHHHHHHHHHHHHTCCCCSTT
T ss_pred EEeCCHHHHHHHHHHHcCCCCchHH
Confidence 9999999999999999999999854
No 10
>1s5p_A NAD-dependent deacetylase; protein deacetylase, SIR2 homologue, hydrolase; HET: ALY; 1.96A {Escherichia coli} SCOP: c.31.1.5
Probab=99.97 E-value=1.7e-32 Score=239.66 Aligned_cols=132 Identities=18% Similarity=0.259 Sum_probs=109.6
Q ss_pred CCCCeEEecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCCcccccEEEcCCCCChhhHHHHHHHh
Q 026284 4 ACICVLEYQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEENC 83 (240)
Q Consensus 4 ~~~kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG~LRP~IV~FGE~lp~~~l~~a~~~~ 83 (240)
|+++|+|+|| ++..++|+.|++.|+.++. . .....|.|+ .|||.|||+||||||. |+ .++++.+++
T Consensus 100 G~~~v~elHG-~~~~~~C~~C~~~~~~~~~-----~----~~~~~p~c~--~Cgg~lrP~vv~FGE~-p~-~~~~a~~~~ 165 (235)
T 1s5p_A 100 GNTNVIHMHG-ELLKVRCSQSGQVLDWTGD-----V----TPEDKCHCC--QFPAPLRPHVVWFGEM-PL-GMDEIYMAL 165 (235)
T ss_dssp TCCSCEETTE-EEEEEEETTTCCEEECCSC-----C----CSSCCC---------CEEEEECCTTSC-CS-SHHHHHHHH
T ss_pred CCCcEEEecC-CceEEEeCCCCCcccchhh-----c----cCCCCCCCC--CCCCeecCcEEEeCCC-HH-HHHHHHHHH
Confidence 6899999999 9999999999998775321 1 122467777 8999999999999999 74 699999999
Q ss_pred ccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhc
Q 026284 84 RMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 84 ~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg 149 (240)
++||++|||||||+|+|+++|+..++++|+++|+||+++|+.|..+++.|+|+++++|++|++.|.
T Consensus 166 ~~adl~lviGTSl~V~Pa~~l~~~a~~~g~~~i~iN~~~t~~~~~~~~~i~~~~~~~l~~l~~~l~ 231 (235)
T 1s5p_A 166 SMADIFIAIGTSGHVYPAAGFVHEAKLHGAHTVELNLEPSQVGNEFAEKYYGPASQVVPEFVEKLL 231 (235)
T ss_dssp HHCSEEEEESCCTTEETGGGHHHHHHHTTCEEEEEESSSCC---CCSEEEESCHHHHHHHHHHHHH
T ss_pred hcCCEEEEECcCCchhhHHHHHHHHHHcCCeEEEEECCCCCCCccccEEEeCCHHHHHHHHHHHHH
Confidence 999999999999999999999999988999999999999999999999999999999999999873
No 11
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP ribose,, gene regulation; HET: ALY OAD; 1.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A* 1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Probab=99.97 E-value=1e-31 Score=241.27 Aligned_cols=140 Identities=21% Similarity=0.289 Sum_probs=115.9
Q ss_pred CCCeEEecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCCcccccEEEcCCCCChhhHHHH-----
Q 026284 5 CICVLEYQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPA----- 79 (240)
Q Consensus 5 ~~kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG~LRP~IV~FGE~lp~~~l~~a----- 79 (240)
+++|+|+|| +++.++|+.|++.|+.+++....... .....|+|+ .|||.|||+||||||.+|++.++.+
T Consensus 124 ~~~v~elHG-~~~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~P~C~--~Cgg~lrP~vv~FGE~lp~~~~~~~~~~~~ 197 (289)
T 1q1a_A 124 DDLIIEAHG-SFAHCHCIGCGKVYPPQVFKSKLAEH---PIKDFVKCD--VCGELVKPAIVFFGEDLPDSFSETWLNDSE 197 (289)
T ss_dssp GGGEEETTE-EEEEEEETTTCCEECHHHHHHHHTCS---SCCSCCBCT--TTCCBEEEEECCBTSBCCHHHHHHHHHHHH
T ss_pred cccEEEecC-CcCceEECCCCCCCcHHHHHHHHhhc---cCCCCccCC--CCCCEECCCEEEcCCCCCHHHHHHHHHhhh
Confidence 358999999 99999999999999887655433110 123579999 8999999999999999998754433
Q ss_pred --------HHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCC----CCCcccEEEECcHHHHHHHHHHH
Q 026284 80 --------EENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTP----KDKKASLVVHAPVDKVIAGVMRH 147 (240)
Q Consensus 80 --------~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~----~d~~adl~I~g~~devl~~L~~~ 147 (240)
.+++.+||++|||||||+|+|+++|+..++ .|+++|+||+++++ .+..+++.|+|+++++|++|+++
T Consensus 198 ~l~~~~~a~~~~~~~DlllviGTSl~V~Pa~~l~~~~~-~~~~~v~IN~~~~~~~~~~~~~~d~~i~~~~~~~l~~l~~~ 276 (289)
T 1q1a_A 198 WLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEIP-RKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEE 276 (289)
T ss_dssp HHHHHHHC----CCCCEEEEESCCCCEETTTHHHHHSC-TTSEEEEESSSCCTHHHHSCCTTCEEECCCHHHHHHHHHHH
T ss_pred hhhhhhhHHHHhccCCEEEEEccCCChhhHHHHHHHHh-cCCCEEEEECCCcccCCCCCcceeEEEeCCHHHHHHHHHHH
Confidence 244788999999999999999999998765 68999999999996 24568999999999999999999
Q ss_pred hccc
Q 026284 148 LNLW 151 (240)
Q Consensus 148 Lg~~ 151 (240)
|||+
T Consensus 277 l~~~ 280 (289)
T 1q1a_A 277 LGWQ 280 (289)
T ss_dssp HTCH
T ss_pred cCCH
Confidence 9984
No 12
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue; Zn-binding domain, rossmann fold domain; HET: MYK NAD; 2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Probab=99.97 E-value=5.9e-32 Score=243.12 Aligned_cols=140 Identities=23% Similarity=0.310 Sum_probs=120.4
Q ss_pred CCCCeEEecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCCcccccEEEcCCCCChhhHHHHHHHh
Q 026284 4 ACICVLEYQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEENC 83 (240)
Q Consensus 4 ~~~kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG~LRP~IV~FGE~lp~~~l~~a~~~~ 83 (240)
|+++|+|+|| |++.++|+.|++.++.++++... . ........|+|+ |||.|||+||||||.+|++.+++|.+++
T Consensus 141 G~~~vielHG-s~~~~~C~~C~~~~~~~~~~~~~-~-~~~~~~~~P~C~---Cgg~lrPdVV~FGE~lp~~~~~~a~~~~ 214 (290)
T 3u31_A 141 GNTKVISLHG-NVFEAVCCTCNKIVKLNKIMLQK-T-SHFMHQLPPECP---CGGIFKPNIILFGEVVSSDLLKEAEEEI 214 (290)
T ss_dssp TCSCEEETTE-EEEEEEETTTCCEEECCTGGGST-T-SSTTTSSSCBCT---TSCBEEEEECCBTSBCCHHHHHHHHHHH
T ss_pred CCCcEEEecC-CcCcceeCCCCCcCChhHhhhcc-c-ccccccCCCCCC---CCCEECCeEEEcCCCCCHHHHHHHHHHH
Confidence 5799999999 99999999999998876543210 0 011234579998 9999999999999999999999999999
Q ss_pred ccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCC-cccEEEECcHHHHHHHHHHHhcc
Q 026284 84 RMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDK-KASLVVHAPVDKVIAGVMRHLNL 150 (240)
Q Consensus 84 ~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~-~adl~I~g~~devl~~L~~~Lg~ 150 (240)
++|||+|||||||+|+|+++|+..++++|+++|+||+++|+.+. .+++.|+|+++++++ +++.|.-
T Consensus 215 ~~aDllLviGTSl~V~Paa~l~~~a~~~g~~~v~IN~~~t~~~~~~~d~~i~g~a~~vl~-~~~~l~~ 281 (290)
T 3u31_A 215 AKCDLLLVIGTSSTVSTATNLCHFACKKKKKIVEINISKTYITNKMSDYHVCAKFSELTK-VANILKG 281 (290)
T ss_dssp HHCSEEEEESCCSCSHHHHHHHHHHHHTTCCEEEEESSCCTTTTTTCSEEEESCGGGHHH-HHHHHHH
T ss_pred hcCCEEEEECcCCcchhHHHHHHHHHHcCCEEEEECCCCCCCCCccceEEEECCHHHHHH-HHHHHhc
Confidence 99999999999999999999999988899999999999999975 689999999999875 6666643
No 13
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces cerevisiae} SCOP: c.31.1.5
Probab=99.97 E-value=4e-31 Score=244.06 Aligned_cols=140 Identities=21% Similarity=0.286 Sum_probs=117.2
Q ss_pred CCCeEEecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCCcccccEEEcCCCCChhhHHHHHH---
Q 026284 5 CICVLEYQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEE--- 81 (240)
Q Consensus 5 ~~kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG~LRP~IV~FGE~lp~~~l~~a~~--- 81 (240)
.++|+|+|| +++.++|+.|++.|+.+++....... .....|+|+ .|||.|||+||||||.+|+..++.+.+
T Consensus 132 ~~~VielHG-sl~~~~C~~C~~~~~~~~~~~~~~~~---~~~~~P~Cp--~Cgg~lrP~VV~FGE~lp~~~~~~~~~a~~ 205 (361)
T 1q14_A 132 DDLIIEAHG-SFAHCHCIGCGKVYPPQVFKSKLAEH---PIKDFVKCD--VCGELVKPAIVFFGEDLPDSFSETWLNDSE 205 (361)
T ss_dssp GGGEEETTE-EEEEEEETTTCCEECTHHHHHHTTSS---SCSCCCBCT--TTCCBEEEEECCBTSCCCHHHHHHHHHHHH
T ss_pred cceEEeccc-cccccCcCCCCccCcHHHHHHHHhhc---ccCCCCCCc--CCCCEeCCCcccccccCCHHHHHHHHHHHH
Confidence 358999999 99999999999999887665433211 112469999 899999999999999999987666555
Q ss_pred ----------HhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCC----CCCcccEEEECcHHHHHHHHHHH
Q 026284 82 ----------NCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTP----KDKKASLVVHAPVDKVIAGVMRH 147 (240)
Q Consensus 82 ----------~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~----~d~~adl~I~g~~devl~~L~~~ 147 (240)
++.+||++|||||||+|+|+++|+..++ .|+++|+||+++|+ .+..+++.|+|+++++|++|++.
T Consensus 206 ~l~~~i~~~~~~~~aDllLviGTSl~V~Paa~l~~~~~-~g~~~v~IN~~~t~~~~~~~~~~d~~i~g~~~evl~~L~~~ 284 (361)
T 1q14_A 206 WLREKITTSGKHPQQPLVIVVGTSLAVYPFASLPEEIP-RKVKRVLCNLETVGDFKANKRPTDLIVHQYSDEFAEQLVEE 284 (361)
T ss_dssp HHHHC--------CCCEEEEESCCCCSTTGGGHHHHSC-TTSEEEEESSSCCHHHHHTCCTTCEEECSCHHHHHHHHHHH
T ss_pred hhhhcchhhhhhccCCEEEEECCCCCchhHHHHHHHHh-cCCeEEEEeCCCccccccCcccccEEEeCCHHHHHHHHHHH
Confidence 5679999999999999999999998765 68999999999995 25668999999999999999999
Q ss_pred hccc
Q 026284 148 LNLW 151 (240)
Q Consensus 148 Lg~~ 151 (240)
|||+
T Consensus 285 Lg~~ 288 (361)
T 1q14_A 285 LGWQ 288 (361)
T ss_dssp HTCH
T ss_pred cCCh
Confidence 9985
No 14
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=99.97 E-value=6.7e-31 Score=239.46 Aligned_cols=137 Identities=16% Similarity=0.216 Sum_probs=120.3
Q ss_pred CCCeEEecccccccceecC--CCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCCcccccEEEcCCCCChhhHHHHHHH
Q 026284 5 CICVLEYQGRNLLSCTAIL--FEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEEN 82 (240)
Q Consensus 5 ~~kViElHG~sl~~~~C~~--C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG~LRP~IV~FGE~lp~~~l~~a~~~ 82 (240)
+++|+|+|| +++.++|+. |++.|+.+....... ....|+|+ .|||.|||+||||||.+|++.++.|.++
T Consensus 147 ~~~VielHG-s~~~~~C~~~~C~~~~~~~~~~~~i~------~~~~P~C~--~Cgg~lrP~VV~FGE~lp~~~~~~a~~~ 217 (323)
T 1j8f_A 147 QEDLVEAHG-TFYTSHCVSASCRHEYPLSWMKEKIF------SEVTPKCE--DCQSLVKPDIVFFGESLPARFFSCMQSD 217 (323)
T ss_dssp GGGEEETTE-EEEEEEESCTTTCCEECHHHHHHHHH------TTCCCBCT--TTCCBEEEEECCBTSCCCHHHHHHHHHG
T ss_pred cccEEEeeC-CcceeecCCCccCccccHHHHHHhhc------cCCCCCCc--CCCCccCCCEEecCCcCCHHHHHHHHHH
Confidence 579999999 999999999 999988754332211 23589999 9999999999999999999999999999
Q ss_pred hccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCC--------------------cccEEEECcHHHHHH
Q 026284 83 CRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDK--------------------KASLVVHAPVDKVIA 142 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~--------------------~adl~I~g~~devl~ 142 (240)
+++||++|||||||+|+|+++|+..+.+ ++++|+||+++|+.+. .+++.|.|+|+++|+
T Consensus 218 ~~~aDlllviGTSl~V~P~a~l~~~~~~-~~~~v~IN~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~gd~~~~l~ 296 (323)
T 1j8f_A 218 FLKVDLLLVMGTSLQVQPFASLISKAPL-STPRLLINKEKAGQSDPFLGMIMGLGGGMDFDSKKAYRDVAWLGECDQGCL 296 (323)
T ss_dssp GGSCSEEEEESSCSCSHHHHHHHTTSCT-TCCEEEEESSCCCCCCHHHHHHHHHHTCCCSSSTTCCSEEEEESCHHHHHH
T ss_pred HhCCCEEEEEeeCcccHHHHHHHHHHHc-CCcEEEEeCCCCCCCcccccccccccccccccccccceeEEEeCCHHHHHH
Confidence 9999999999999999999999987765 4567899999998654 378999999999999
Q ss_pred HHHHHhccc
Q 026284 143 GVMRHLNLW 151 (240)
Q Consensus 143 ~L~~~Lg~~ 151 (240)
+|++.|||+
T Consensus 297 ~L~~~lgw~ 305 (323)
T 1j8f_A 297 ALAELLGWK 305 (323)
T ss_dssp HHHHHTTCH
T ss_pred HHHHHcCCc
Confidence 999999984
No 15
>2c31_A Oxalyl-COA decarboxylase; oxalate, thiamin diphosphate, flavoprotein, lyase, thiamine pyrophosphate; HET: TZD ADP; 1.73A {Oxalobacter formigenes} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2ji6_A* 2ji7_A* 2ji8_A* 2ji9_A* 2jib_A*
Probab=95.09 E-value=0.061 Score=51.26 Aligned_cols=70 Identities=14% Similarity=0.077 Sum_probs=50.0
Q ss_pred HHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCC--cccEEEECcHHHHHHHHHHHhc
Q 026284 80 EENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDK--KASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 80 ~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~--~adl~I~g~~devl~~L~~~Lg 149 (240)
.+.+++||++|++|+.+.-......+......+.++|.|+.++...++ ..++.|.|++.+++.+|.+.|.
T Consensus 267 ~~~l~~aDlvl~iG~~~~~~~~~~~~~~~~~~~~~ii~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~ 338 (568)
T 2c31_A 267 AFALAQCDVCVLIGARLNWLMQHGKGKTWGDELKKYVQIDIQANEMDSNQPIAAPVVGDIKSAVSLLRKALK 338 (568)
T ss_dssp HHHHHHCSEEEEESCCCSGGGGGGCSGGGTTSCCEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHHT
T ss_pred HhhhccCCEEEEECCCCccccccCcccccCCCCCeEEEEeCCHHHhcCCcCCCceeeCCHHHHHHHHHHhhh
Confidence 356788999999999986433222211111146789999988765543 4688999999999999998874
No 16
>2q28_A Oxalyl-COA decarboxylase; lyase, oxalate degradation, thiami diphosphate, lyase; HET: TPP ADP MES; 1.74A {Escherichia coli} PDB: 2q27_A* 2q29_A*
Probab=94.19 E-value=0.12 Score=49.11 Aligned_cols=69 Identities=16% Similarity=0.212 Sum_probs=49.4
Q ss_pred HHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCC--CcccEEEECcHHHHHHHHHHHhcc
Q 026284 80 EENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKD--KKASLVVHAPVDKVIAGVMRHLNL 150 (240)
Q Consensus 80 ~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d--~~adl~I~g~~devl~~L~~~Lg~ 150 (240)
.+.+++||++|++|+.+.-.....-.. ...+.++|.|+.++...+ ...++.|.|++.++|.+|.+.|.-
T Consensus 265 ~~~l~~aDlvl~iG~~~~~~~~~~~~~--~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~~ 335 (564)
T 2q28_A 265 SFALANADVVMLVGARLNWLLAHGKKG--WAADTQFIQLDIEPQEIDSNRPIAVPVVGDIASSMQGMLAELKQ 335 (564)
T ss_dssp HHHHHHCSEEEEESCCCSGGGGGGTTT--SCTTCEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHHHH
T ss_pred HhHhhcCCEEEEECCcccccccccccc--cCCCCeEEEEeCCHHHhcCCCCCCeEEEcCHHHHHHHHHHHhhh
Confidence 356788999999999985322211111 124678999998876544 346899999999999999988753
No 17
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=94.15 E-value=0.13 Score=49.15 Aligned_cols=70 Identities=19% Similarity=0.246 Sum_probs=51.7
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCC--cccEEEECcHHHHHHHHHHHhc
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDK--KASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~--~adl~I~g~~devl~~L~~~Lg 149 (240)
.+.+.+.+||++|++|+.+.-.-...+... ..+.++|.|+.++...++ ..++.|.|++.+++.+|.+.|.
T Consensus 271 ~~~~~l~~aDlvl~iG~~~~~~~~~~~~~~--~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~ 342 (590)
T 1ybh_A 271 YANYAVEHSDLLLAFGVRFDDRVTGKLEAF--ASRAKIVHIDIDSAEIGKNKTPHVSVCGDVKLALQGMNKVLE 342 (590)
T ss_dssp HHHHHHHHCSEEEEESCCCCHHHHSSGGGT--TTTSEEEEEESCTTTTTSSSCCSEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEcCCCCccccCccccc--CCCCeEEEEECCHHHhCCCcCCCeEEecCHHHHHHHHHHhhh
Confidence 455677899999999998853222222211 235689999999876654 5689999999999999988774
No 18
>2iht_A Carboxyethylarginine synthase; thiamin diphosphate complex, transferase; HET: MSE TPP; 2.00A {Streptomyces clavuligerus} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1upb_A* 1upc_A* 1upa_A* 2ihu_A* 2ihv_A*
Probab=94.06 E-value=0.11 Score=49.69 Aligned_cols=68 Identities=13% Similarity=0.047 Sum_probs=50.6
Q ss_pred HHHHhccCCEEEEEcCC-CCccccccchhhhhcCCCEEEEEcCCCCCCCC--cccEEEECcHHHHHHHHHHHhc
Q 026284 79 AEENCRMADVVLCLGTS-LQITPACNLPLKSLRGGGKIVIVNLQQTPKDK--KASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 79 a~~~~~~aDLvLVIGTS-L~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~--~adl~I~g~~devl~~L~~~Lg 149 (240)
+.+.+++||++|++|+. +.-.....+. ...+.++|.|+.++...++ ..++.|.|++.+++.+|.+.|.
T Consensus 281 ~~~~l~~aDlvl~iG~~~~~~~~~~~~~---~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~ 351 (573)
T 2iht_A 281 LQTMFAPVDLVLTVGYDYAEDLRPSMWQ---KGIEKKTVRISPTVNPIPRVYRPDVDVVTDVLAFVEHFETATA 351 (573)
T ss_dssp HHHHHTTCCEEEEETCCGGGCCCHHHHC---CSSCCEEEEEESSCCSCTTTCCCSEEEESCHHHHHHHHHHHTT
T ss_pred HHHHHhhCCEEEEECCCccccccccccC---CCCCCeEEEEeCCHHHhCCCcCCCeeEeCCHHHHHHHHHHhcc
Confidence 45677899999999998 6433222221 1146789999999876654 4689999999999999998875
No 19
>2pgn_A Cyclohexane-1,2-dione hydrolase (CDH); three alpha/beta domains; HET: P6G FAD TPP; 1.20A {Azoarcus SP} PDB: 2pgo_A*
Probab=93.90 E-value=0.14 Score=49.14 Aligned_cols=69 Identities=22% Similarity=0.162 Sum_probs=51.3
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCC--cccEEEECcHHHHHHHHHHHhc
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDK--KASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~--~adl~I~g~~devl~~L~~~Lg 149 (240)
.+.+.+.+||++|++|+.+.-.... +.. ...+.++|.|+.++...++ ..++.|.|++.+++.+|.+.|.
T Consensus 264 ~~~~~l~~aDlvl~iG~~~~~~~~~-~~~--~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~ 334 (589)
T 2pgn_A 264 SANDMMAAADFVLVLGSRLSDWGIA-QGY--ITKMPKFVHVDTDPAVLGTFYFPLLSVVADAKTFMEQLIEVLP 334 (589)
T ss_dssp HHHHHHHHCSEEEEESCCCCTTTTT-TTT--TCCCCSEEEEESCGGGTTSSSCCSEEEECCHHHHHHHHHHHGG
T ss_pred HHHHHHhhCCEEEEECCCccccccc-ccc--cCCCCeEEEEeCCHHHHCCCcCCCEEEEeCHHHHHHHHHHHhh
Confidence 3456678899999999988544333 211 1235689999998866543 4689999999999999998875
No 20
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=93.69 E-value=0.15 Score=48.64 Aligned_cols=67 Identities=12% Similarity=0.313 Sum_probs=48.7
Q ss_pred HHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCC--cccEEEECcHHHHHHHHHHHhc
Q 026284 79 AEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDK--KASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 79 a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~--~adl~I~g~~devl~~L~~~Lg 149 (240)
+.+.+++||++|++|+.........+ . ..+.++|.|+.++...++ ..++.|.|++.+++.+|.+.|.
T Consensus 268 ~~~~l~~aDlvl~lG~~~~~~~~~~~---~-~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~ 336 (566)
T 1ozh_A 268 GDRLLQLADLVICIGYSPVEYEPAMW---N-SGNATLVHIDVLPAYEERNYTPDVELVGDIAGTLNKLAQNID 336 (566)
T ss_dssp HHHHHHHCSEEEEESCCGGGSCGGGT---C-CSCSEEEEEESSCCCCBTTBCCSEEEESCHHHHHHHHHHTCC
T ss_pred HHHHHHhCCEEEEECCCCCcCCcccc---C-CCCCcEEEEeCCHHHhCCCCCCCEEEEeCHHHHHHHHHHhcc
Confidence 34567789999999994322222222 1 236799999999876654 4689999999999999988764
No 21
>4feg_A Pyruvate oxidase; carbanion, structure activity relationship, oxidation-reduct umpolung, thiamine diphosphate, reaction intermediate; HET: TDM FAD GOL; 1.09A {Lactobacillus plantarum} PDB: 4fee_A* 1y9d_A* 2ez9_A* 2ez4_A* 2ez8_A* 2ezt_A* 2ezu_A* 1pow_A* 1pox_A*
Probab=93.58 E-value=0.16 Score=48.86 Aligned_cols=69 Identities=22% Similarity=0.388 Sum_probs=51.3
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCC--cccEEEECcHHHHHHHHHHHhcc
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDK--KASLVVHAPVDKVIAGVMRHLNL 150 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~--~adl~I~g~~devl~~L~~~Lg~ 150 (240)
.+.+.+.+||++|++|+.+... .+.. ....++++|.|+.++...++ ..++.|.|++..+|.+|.+.+..
T Consensus 269 ~~~~~l~~aDlvl~iG~~~~~~---~~~~-~~~~~~~~i~id~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~l~~ 339 (603)
T 4feg_A 269 PANEALAQADVVLFVGNNYPFA---EVSK-AFKNTRYFLQIDIDPAKLGKRHKTDIAVLADAQKTLAAILAQVSE 339 (603)
T ss_dssp HHHHHHHHCSEEEEESCCCTTT---TTTT-TTTTCSEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHTCCC
T ss_pred HHHHHHHhCCEEEEECCCCCcc---cccc-cCCCCCeEEEEeCCHHHhCCccCCCEEEEeCHHHHHHHHHHhhhc
Confidence 3556778999999999998732 2211 12346789999998876553 46899999999999999988753
No 22
>2uz1_A Benzaldehyde lyase; thiamine diphosphate, thiamine pyrophosphate, benzoin, flavoprotein; HET: TPP; 1.65A {Pseudomonas fluorescens} PDB: 2ag1_A* 2ag0_A* 2uz1_B* 3iae_A* 3iaf_A* 3d7k_A*
Probab=93.51 E-value=0.13 Score=48.86 Aligned_cols=66 Identities=15% Similarity=0.166 Sum_probs=50.4
Q ss_pred hccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCC--cccEEEECcHHHHHHHHHHHhc
Q 026284 83 CRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDK--KASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~--~adl~I~g~~devl~~L~~~Lg 149 (240)
+.+||++|++|+.+.-.....+-... ..+.++|.|+.++...++ ..++.|.|++.+++.+|.+.|.
T Consensus 267 ~~~aDlvl~iG~~~~~~~~~~~~~~~-~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~ 334 (563)
T 2uz1_A 267 DAAPDLVLMLGARFGLNTGHGSGQLI-PHSAQVIQVDPDACELGRLQGIALGIVADVGGTIEALAQATA 334 (563)
T ss_dssp TCCCSEEEEESCCSSGGGTTTSCSSS-CTTSEEEEECSCGGGTTSSSCCSEEECSCHHHHHHHHHHHHT
T ss_pred hcCCCEEEEECCCCcccccccccccC-CCCCeEEEEECCHHHhCCCCCCCeEEEcCHHHHHHHHHHhhh
Confidence 78899999999998765543332111 125799999999876554 4689999999999999998875
No 23
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=93.50 E-value=0.16 Score=48.51 Aligned_cols=67 Identities=15% Similarity=0.117 Sum_probs=49.4
Q ss_pred HHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCC--CcccEEEECcHHHHHHHHHHHhc
Q 026284 81 ENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKD--KKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 81 ~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d--~~adl~I~g~~devl~~L~~~Lg 149 (240)
..+.+||++|.+|+.+.-.+...+.. ...++++|.|+.++...+ ...++.|.|++.++|..|.+.+.
T Consensus 285 ~~~~~aDlvl~~G~~~~~~~~~~~~~--~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~ 353 (578)
T 3lq1_A 285 IDKLTPEVVIRFGSMPVSKPLKNWLE--QLSDIRFYVVDPGAAWKDPIKAVTDMIHCDERFLLDIMQQNMP 353 (578)
T ss_dssp HHHTCCSEEEEESSCCSCHHHHHHHH--HCCSSEEEEECTTCCCCCTTCCCSEEECSCHHHHHHHHHHHSC
T ss_pred cccCCCCEEEEeCCcccchhHHHHHh--cCCCCEEEEECCCCCcCCCCcCceEEEEeCHHHHHHHHHhhcc
Confidence 35678999999999764333322321 125679999999987655 34789999999999999988764
No 24
>3eya_A Pyruvate dehydrogenase [cytochrome]; pyruvate oxidase, membrane-associated flavoprotein dehydrogenase, interactions with lipids cell membrane; HET: TDP FAD; 2.50A {Escherichia coli} PDB: 3ey9_A*
Probab=93.22 E-value=0.16 Score=48.16 Aligned_cols=65 Identities=12% Similarity=0.259 Sum_probs=49.3
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCC--cccEEEECcHHHHHHHHHHHhc
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDK--KASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~--~adl~I~g~~devl~~L~~~Lg 149 (240)
.+.+.+.+||++|++|+.+.... + ...+.++|.|+..+...++ ..++.|.|++.+++..|.+.|.
T Consensus 258 ~~~~~~~~aDlvl~iG~~~~~~~---~----~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~ 324 (549)
T 3eya_A 258 SGFHTMMNADTLVLLGTQFPYRA---F----YPTDAKIIQIDINPASIGAHSKVDMALVGDIKSTLRALLPLVE 324 (549)
T ss_dssp HHHHHHHHCSEEEEESCCCCCGG---G----SCSSSEEEEEESCGGGTTSSSCCSEEEECCHHHHHHHHGGGSC
T ss_pred HHHHHHHhCCEEEEECCCCCccc---c----CCCCCeEEEEeCCHHHhCCCCCCCeEEEeCHHHHHHHHHHhcc
Confidence 34566789999999999875321 1 2346789999998876543 4688999999999999888764
No 25
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=91.83 E-value=0.24 Score=46.56 Aligned_cols=71 Identities=13% Similarity=0.156 Sum_probs=52.3
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCC-cccEEEECcHHHHHHHHHHHhc
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDK-KASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~-~adl~I~g~~devl~~L~~~Lg 149 (240)
.+.+.+++||++|++|+.+.-.....+... ...+.++|.|+.++...++ ..++.|.|++.+++.+|.+.+.
T Consensus 259 ~~~~~l~~aDlvl~iG~~~~~~~~~~~~~~-~~~~~~~i~id~d~~~~~~~~~~~~i~~d~~~~l~~L~~~~~ 330 (528)
T 1q6z_A 259 AISQLLEGHDVVLVIGAPVFRYHQYDPGQY-LKPGTRLISVTCDPLEAARAPMGDAIVADIGAMASALANLVE 330 (528)
T ss_dssp HHHHHHTTCSEEEEESSCTTCCCSCCCSCS-SCTTCEEEEEESCHHHHHHCSSSEEEESCHHHHHHHHHHHSC
T ss_pred HHHHHHhcCCEEEEECCCCccccccCcCCc-CCCCCeEEEEeCCHHHhCCCCCCeeEeCCHHHHHHHHHHHhh
Confidence 456678899999999998876655443211 1236789999998753211 5688999999999999998874
No 26
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=91.77 E-value=0.33 Score=46.56 Aligned_cols=67 Identities=15% Similarity=0.169 Sum_probs=47.7
Q ss_pred HHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCC--cccEEEECcHHHHHHHHHHHhc
Q 026284 80 EENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDK--KASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 80 ~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~--~adl~I~g~~devl~~L~~~Lg 149 (240)
.+.++ +|++|++|+.+.-.....+.. ...+.++|.|+.++...++ ..++.|.|++.+++.+|.+.|.
T Consensus 305 ~~~~~-~Dlvl~iG~~~~~~~~~~~~~--~~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~L~~~l~ 373 (604)
T 2x7j_A 305 KRKLR-PDVVIRFGPMPVSKPVFLWLK--DDPTIQQIVIDEDGGWRDPTQASAHMIHCNASVFAEEIMAGLT 373 (604)
T ss_dssp HHHHC-CSEEEEESSCCSCHHHHHHHH--HCTTSEEEEECTTCCCCCTTSCCSEEECSCHHHHHHHHHHTSC
T ss_pred hhhcC-CCEEEEECCcCccHHHHHHHh--hCCCCeEEEECCCCCccCCCccceEEEEcCHHHHHHHHHHhhc
Confidence 34455 899999999874332222211 1126789999999876654 4688999999999999988774
No 27
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=91.68 E-value=0.44 Score=45.62 Aligned_cols=68 Identities=16% Similarity=0.288 Sum_probs=50.7
Q ss_pred HHHHHhccCCEEEEEcCCCCcccc-ccchhhhhcCCCEEEEEcCCCCCCCC--cccEEEECcHHHHHHHHHHHhcc
Q 026284 78 PAEENCRMADVVLCLGTSLQITPA-CNLPLKSLRGGGKIVIVNLQQTPKDK--KASLVVHAPVDKVIAGVMRHLNL 150 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa-~~lp~~a~~~g~~lViIN~q~t~~d~--~adl~I~g~~devl~~L~~~Lg~ 150 (240)
.+.+.+++||++|++|+.+..... ..+ . .+.++|.|+.++...++ ..++.+.|++..++.+|.+.|..
T Consensus 262 ~~~~~l~~aDlvl~iG~~~~~~~~~~~~----~-~~~~~i~id~d~~~~~~~~~~~~~i~gd~~~~l~~L~~~l~~ 332 (590)
T 1v5e_A 262 PANETILEADTVLFAGSNFPFSEVEGTF----R-NVDNFIQIDIDPAMLGKRHHADVAILGDAALAIDEILNKVDA 332 (590)
T ss_dssp HHHHHHHHCSEEEEESCCCTTTTTTTTT----T-TCSEEEEEESCGGGTTSSSCCSEEEESCHHHHHHHHHHHSCC
T ss_pred HHHHHHHhCCEEEEECCCCcchhccccC----C-CCCeEEEEeCCHHHHCCCcCCCeEEEcCHHHHHHHHHHhhcc
Confidence 455677889999999998854431 101 1 25689999998766543 46899999999999999988753
No 28
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=91.46 E-value=0.29 Score=46.54 Aligned_cols=65 Identities=17% Similarity=0.065 Sum_probs=46.9
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCC--cccEEEECcHHHHHHHH
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDK--KASLVVHAPVDKVIAGV 144 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~--~adl~I~g~~devl~~L 144 (240)
.+.+.+.+||++|++|+.+.-.+...+... ....++|.|+.++...++ ..++.|.|++.+++..|
T Consensus 271 ~~~~~~~~aDlvl~iG~~~~~~~~~~~~~~--~~~~~~i~id~d~~~~~~~~~~~~~i~~d~~~~l~~l 337 (556)
T 3hww_A 271 KATSELQQAQIVVQLGSSLTGKRLLQWQAS--CEPEEYWIVDDIEGRLDPAHHRGRRLIANIADWLELH 337 (556)
T ss_dssp HHHHHHTTCSEEEEESBCCCCHHHHHHHHH--CCCSEEEEEESSCSCCCTTCCSEEEEESCHHHHHHHS
T ss_pred hhhhcccCCCEEEEcCCCcccHHHHHHHhc--CCCCeEEEECCCCccCCCCCCceEEEEcCHHHHHHhc
Confidence 456677899999999999864443333221 123489999988876553 46899999999999764
No 29
>2pan_A Glyoxylate carboligase; thiamin-diphosphate (THDP), thimain-dependent enzymes, FAD, lyase; HET: FAD TDP 1PE; 2.70A {Escherichia coli}
Probab=91.44 E-value=0.26 Score=47.44 Aligned_cols=70 Identities=13% Similarity=0.172 Sum_probs=50.0
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCC--cccEEEECcHHHHHHHHHHHhc
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDK--KASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~--~adl~I~g~~devl~~L~~~Lg 149 (240)
.+.+.+.+||++|++|+.+.-.....+... ..+.++|.|+.++...++ ..++.|.|++..++..|.+.|.
T Consensus 286 ~~~~~l~~aDlvl~iG~~~~~~~~~~~~~~--~~~~~~i~id~d~~~~~~~~~~~~~i~~D~~~~l~~L~~~l~ 357 (616)
T 2pan_A 286 YGNATLLASDMVFGIGNRFANRHTGSVEKY--TEGRKIVHIDIEPTQIGRVLCPDLGIVSDAKAALTLLVEVAQ 357 (616)
T ss_dssp HHHHHHHHCSEEEEESCCCCHHHHSSHHHH--HTTCEEEEEESCGGGTTSSSCCSSCEECCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCCcccccCccccc--CCCCeEEEEeCCHHHhCCCCCCCeEEEcCHHHHHHHHHHHhh
Confidence 455677889999999998763222222111 235689999998765443 4578899999999999988764
No 30
>1o97_D Electron transferring flavoprotein alpha-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 c.31.1.2 PDB: 1o95_D* 1o96_B* 1o94_D* 3clu_D* 3clt_D* 3clr_D* 3cls_D*
Probab=91.02 E-value=0.24 Score=44.46 Aligned_cols=59 Identities=15% Similarity=0.127 Sum_probs=47.6
Q ss_pred CCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCC-CCCCcccEEEECcHHHHHHHHHHHhc
Q 026284 86 ADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQT-PKDKKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 86 aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t-~~d~~adl~I~g~~devl~~L~~~Lg 149 (240)
|+|.|.+|=|.++.=.+.+ +.-..||-||.++. |.-+.+|+-|-||.-+++|+|.++|.
T Consensus 260 ~~lYiA~GISGAiQHlaGm-----~~s~~IVAIN~D~~ApIF~~ADygiVgDl~~vvP~L~~~l~ 319 (320)
T 1o97_D 260 CKLYVAMGISGSIQHMAGM-----KHVPTIIAVNTDPGASIFTIAKYGIVADIFDIEEELKAQLA 319 (320)
T ss_dssp CSEEEEESCCCCHHHHHHH-----TTCSEEEEECSCTTCGGGGTCSEEECSCHHHHHHHHHHHC-
T ss_pred cceEEEEeccCcHHHHhhc-----ccCCEEEEEeCCCCCCcccccCeEEeeeHHHHHHHHHHHHh
Confidence 4999999999998654444 33347888999875 55678999999999999999999873
No 31
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=90.50 E-value=0.54 Score=46.03 Aligned_cols=71 Identities=15% Similarity=0.287 Sum_probs=48.7
Q ss_pred HHHHhccCCEEEEEcCCCCccccccch---hhhh----cCCCEEEEEcCCCCCCCC--cccEEEECcHHHHHHHHHHHhc
Q 026284 79 AEENCRMADVVLCLGTSLQITPACNLP---LKSL----RGGGKIVIVNLQQTPKDK--KASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 79 a~~~~~~aDLvLVIGTSL~V~Pa~~lp---~~a~----~~g~~lViIN~q~t~~d~--~adl~I~g~~devl~~L~~~Lg 149 (240)
+.+.+++||++|++|+.+.-.-...+. ..++ ...+.+|.|+.++...++ ..++.|.|++..+|..|.+.|.
T Consensus 350 ~~~~l~~aDlvl~iG~r~~~~~t~~~~~~~~~~~~~~~~~~~~iI~idid~~~~~~~~~~~~~i~gD~~~~l~~L~~~l~ 429 (677)
T 1t9b_A 350 ANLAVQNADLIIAVGARFDDRVTGNISKFAPEARRAAAEGRGGIIHFEVSPKNINKVVQTQIAVEGDATTNLGKMMSKIF 429 (677)
T ss_dssp HHHHHHHCSEEEEESCCCCTTTSCSGGGSSHHHHHHHHTTSCEEEEEESCGGGSSSSSCCSEEEESCHHHHHHHHHTTSC
T ss_pred HHHHHhcCCEEEEECCccCcccccCccccCcccccccccCCceEEEEECCHHHhCCcccCCEEEeCCHHHHHHHHHHHhh
Confidence 345678899999999988633222221 1121 223348888888765543 4689999999999999988774
No 32
>1efv_A Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 c.31.1.2 PDB: 2a1u_A* 1t9g_R* 2a1t_R*
Probab=88.58 E-value=0.71 Score=41.24 Aligned_cols=60 Identities=20% Similarity=0.252 Sum_probs=49.0
Q ss_pred cCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCC-CCCCcccEEEECcHHHHHHHHHHHhc
Q 026284 85 MADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQT-PKDKKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 85 ~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t-~~d~~adl~I~g~~devl~~L~~~Lg 149 (240)
..+|.|.+|=|.++.=.+.+ +.-..||-||.++. |.-+.+|+-|-||.-+++|+|.++|.
T Consensus 253 ~P~lYiA~GISGAiQHlaGm-----~~s~~IVAIN~D~~ApIf~~ADygiVgDl~~v~P~L~~~l~ 313 (315)
T 1efv_A 253 APELYIAVGISGAIQHLAGM-----KDSKTIVAINKDPEAPIFQVADYGIVADLFKVVPEMTEILK 313 (315)
T ss_dssp CCSEEEEESCCCCHHHHTTT-----TTCSEEEEEESCTTCGGGGTCSEEEESCHHHHHHHHHHHTC
T ss_pred CcceEEEecccCcHHHHhhc-----ccCCEEEEEeCCCCCCcchhcCeEEeeeHHHHHHHHHHHHh
Confidence 35899999999998765555 23346888999875 55678999999999999999999874
No 33
>1efp_A ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3 c.31.1.2
Probab=87.80 E-value=0.72 Score=41.05 Aligned_cols=59 Identities=17% Similarity=0.218 Sum_probs=47.7
Q ss_pred cCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCC-CCCCcccEEEECcHHHHHHHHHHHh
Q 026284 85 MADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQT-PKDKKASLVVHAPVDKVIAGVMRHL 148 (240)
Q Consensus 85 ~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t-~~d~~adl~I~g~~devl~~L~~~L 148 (240)
..+|.|.+|=|.++.=.+.+ +.-..||-||.++. |.-+.+|+-|-||.-+++|+|.++|
T Consensus 248 ~P~lYiA~GISGAiQHlaGm-----~~s~~IVAIN~D~~ApIF~~ADygiVgDl~~v~P~L~~~l 307 (307)
T 1efp_A 248 APELYVAVGISGAIQHLAGM-----KDSKVIVAINKDEEAPIFQIADYGLVGDLFSVVPELTGKL 307 (307)
T ss_dssp CCSEEEEESCCCCHHHHTTT-----TTCSEEEEEESCTTCGGGGTCSEEEESCHHHHHHHHHHTC
T ss_pred CCceEEEEeccCcHHHHhhh-----ccCCEEEEEeCCCCCCcccccCeEEeeeHHHHHHHHHhhC
Confidence 35899999999998765555 23346888999875 5567899999999999999998864
No 34
>2vk8_A Pyruvate decarboxylase isozyme 1; asymmetric active sites, phenylalanine catabolism, tryptophan catabolism, thiamine pyrophosphate; HET: TPP; 1.42A {Saccharomyces cerevisiae} PDB: 1qpb_A* 2vk1_A* 2w93_A* 1pyd_A* 1pvd_A* 2vk4_A* 2vjy_A* 2g1i_A*
Probab=86.71 E-value=0.8 Score=43.34 Aligned_cols=68 Identities=13% Similarity=0.148 Sum_probs=47.0
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhc
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg 149 (240)
.+.+.+++||++|++|+.+.-.+...+... ..+.++|.||.++...++. ....-...+++.+|.+.|.
T Consensus 271 ~~~~~l~~aDlvl~iG~~~~~~~~~~~~~~--~~~~~~i~id~d~~~~~~~--~~~~~~~~~~l~~L~~~l~ 338 (563)
T 2vk8_A 271 EVKEAVESADLILSVGALLSDFNTGSFSYS--YKTKNIVEFHSDHMKIRNA--TFPGVQMKFVLQKLLTTIA 338 (563)
T ss_dssp HHHHHHHTCSEEEEESCCCCTTTTTTTCCC--CCCSCEEEECSSEEEETTE--EEETCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEECCCCccccccccccC--CCCCeEEEEeCCceEECCc--ccCCcCHHHHHHHHHHhhc
Confidence 455678899999999999865555443221 1356899999998765543 3344456888888887764
No 35
>1ovm_A Indole-3-pyruvate decarboxylase; thiamine diphosphate, indole-3-acetic acid, TDP dependent enzyme, lyase; HET: TPP; 2.65A {Enterobacter cloacae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9
Probab=85.64 E-value=1 Score=42.50 Aligned_cols=68 Identities=19% Similarity=0.260 Sum_probs=47.0
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhcc
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLNL 150 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg~ 150 (240)
.+.+.+++||++|++|+.+.-.+...+... ..+.++|.|+.++...++. ........+++..|.+ |+.
T Consensus 269 ~~~~~l~~aD~vl~iG~~~~~~~~~~~~~~--~~~~~~i~id~d~~~~~~~--~~~~~~~~~~l~~L~~-l~~ 336 (552)
T 1ovm_A 269 AVKEAIEGADTVLCVGTRFTDTLTAGFTHQ--LTPAQTIEVQPHAARVGDV--WFTGIPMNQAIETLVE-LCK 336 (552)
T ss_dssp HHHHHHHTSSEEEEESCCCCTTTTTTTCCC--CCTTTEEEECSSEEEETTE--EEESCCHHHHHHHHHH-HHH
T ss_pred HHHHHHHhCCEEEEECCCCCcccccccccC--CCCCeEEEEeCChheeCCc--ccCCccHHHHHHHHHh-Ccc
Confidence 456678899999999999876665544321 1356799999988765542 3334456888888887 643
No 36
>2vpz_A Thiosulfate reductase; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_A* 2vpw_A* 2vpy_A*
Probab=84.81 E-value=1.5 Score=43.16 Aligned_cols=56 Identities=16% Similarity=0.157 Sum_probs=41.0
Q ss_pred hccCCEEEEEcCCCCcccc---ccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHH
Q 026284 83 CRMADVVLCLGTSLQITPA---CNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVD 138 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa---~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~d 138 (240)
+++||++|++|+-....-. ......++++|+++|.|++..|.....+|.+|.-+.+
T Consensus 197 ~~~ad~il~~G~n~~~~~p~~~~~~~~~a~~~G~klividPr~t~ta~~Ad~~l~irPG 255 (765)
T 2vpz_A 197 WENARYIVLIGHHIGEDTHNTQLQDFALALKNGAKVVVVDPRFSTAAAKAHRWLPIKPG 255 (765)
T ss_dssp GGGCSEEEEESCCBTTBCCHHHHHHHHHHHHTTCEEEEECSBCCTTGGGCSEEECCCTT
T ss_pred cccCCEEEEEeCChhhcCChHHHHHHHHHHHCCCEEEEECCCCCcchhhCCeEeCCCCC
Confidence 5689999999986543321 1112346788999999999999887889988875433
No 37
>2vbi_A Pyruvate decarboxylase; thiamine pyrophosphate, lyase, pyruv flavoprotein, THDP-dependent enzyme; HET: TPP; 2.75A {Acetobacter pasteurianus}
Probab=83.73 E-value=1.2 Score=42.11 Aligned_cols=67 Identities=9% Similarity=0.163 Sum_probs=46.5
Q ss_pred HHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhc
Q 026284 79 AEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 79 a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg 149 (240)
+.+.+++||++|++|+.+.-.....+... ..+.++|.|+.++...++ .....-.+.+++..|.+.+.
T Consensus 270 ~~~~l~~aDlvl~iG~~~~~~~~~~~~~~--~~~~~~i~id~d~~~~~~--~~~~~~~~~~~l~~L~~~l~ 336 (566)
T 2vbi_A 270 VQELVETSDALLCIAPVFNDYSTVGWSAW--PKGPNVILAEPDRVTVDG--RAYDGFTLRAFLQALAEKAP 336 (566)
T ss_dssp HHHHHHTCSEEEEESCCCBTTTTTTTTSC--CCSTTEEEECSSEEEETT--EEEESSCHHHHHHHHHHHCC
T ss_pred HHHHHHhCCEEEEECCCcccccccccccc--CCCCcEEEEeCChheeCC--cccCCccHHHHHHHHHHhcc
Confidence 44567889999999998865554443221 235689999998876554 34455567888888887764
No 38
>2wvg_A PDC, pyruvate decarboxylase; thiamine diphosphate, lyase, flavoprotein, metal-binding, alcohol fermentation; HET: TPU; 1.75A {Zymomonas mobilis} PDB: 2wva_A* 2wvh_A 3oe1_A* 1zpd_A*
Probab=82.75 E-value=1.2 Score=42.18 Aligned_cols=67 Identities=10% Similarity=0.120 Sum_probs=45.7
Q ss_pred HHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhc
Q 026284 79 AEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 79 a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg 149 (240)
+.+.+++||++|++|+.+.-.....+... ..+.++|.|+.++...++ .......+.++|..|.+.+.
T Consensus 270 ~~~~l~~aDlvl~iG~~~~~~~~~~~~~~--~~~~~~i~id~d~~~~~~--~~~~~~~~~~~l~~L~~~l~ 336 (568)
T 2wvg_A 270 VEKTMKEADAVIALAPVFNDYSTTGWTDI--PDPKKLVLAEPRSVVVNG--IRFPSVHLKDYLTRLAQKVS 336 (568)
T ss_dssp HHHHHHHCSEEEEESCCCBTTTTTTTTCC--CCTTTEEEECSSEEEETT--EEEESCCHHHHHHHHHHHCC
T ss_pred HHHHHHhCCEEEEECCCcccccccccccC--CCCCcEEEEeCChhhcCC--eecCCCCHHHHHHHHHHhcc
Confidence 34567889999999998764444333211 135679999998876553 34455567888888888764
No 39
>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus}
Probab=82.00 E-value=0.7 Score=45.16 Aligned_cols=52 Identities=17% Similarity=0.238 Sum_probs=38.2
Q ss_pred hccCCEEEEEcCCCCcccc---ccchhhhhcCCCEEEEEcCCCCCCCCcccEEEE
Q 026284 83 CRMADVVLCLGTSLQITPA---CNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVH 134 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa---~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~ 134 (240)
+.+||++|++|+-....-. ......++++|+++|.|++..|.....+|.+|.
T Consensus 158 ~~~ad~il~~G~n~~~~~p~~~~~~l~~a~~~G~klividPr~t~ta~~Ad~~l~ 212 (727)
T 2e7z_A 158 FADSNCLLFIGKNLSNHNWVSQFNDLKAALKRGCKLIVLDPRRTKVAEMADIWLP 212 (727)
T ss_dssp TTTCSEEEEESCCCBTTBSHHHHHHHHHHHHHTCEEEEECSSCCHHHHHCSEEEC
T ss_pred cccCCEEEEECCChhhcCCHHHHHHHHHHHHCCCeEEEECCCCCcchhhcceeec
Confidence 5789999999997654321 112234667899999999998876667888885
No 40
>2vbf_A Branched-chain alpha-ketoacid decarboxylase; KDCA, flavoprotein, THDP-dependent enzymes, thiamine pyrophosphate, lyase; HET: TPP; 1.60A {Lactococcus lactis} PDB: 2vbg_A*
Probab=77.94 E-value=0.99 Score=42.82 Aligned_cols=68 Identities=15% Similarity=0.168 Sum_probs=44.4
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhc
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg 149 (240)
.+.+.+++||++|++|+.+.-.....+... ..+.++|.|+.++...++ ......++..++..|.+.++
T Consensus 288 ~~~~~l~~aDlvl~iG~~~~~~~~~~~~~~--~~~~~~i~id~d~~~~~~--~~~~~~~~~~~l~~L~~~l~ 355 (570)
T 2vbf_A 288 SLKNFVESADFILMLGVKLTDSSTGAFTHH--LDENKMISLNIDEGIIFN--KVVEDFDFRAVVSSLSELKG 355 (570)
T ss_dssp HHHHHHHHCSEEEEESCCCCGGGTTTTCCC--CCGGGEEEECSSCEEETT--EEECSSCHHHHHHTGGGCCS
T ss_pred HHHHHHHhCCEEEEECCCcccccccccccC--CCCCeEEEEeCCHHHhCC--eeecCCCHHHHHHHHHHhcc
Confidence 455677889999999998865554433211 124579999998776554 23444467777777666543
No 41
>1pno_A NAD(P) transhydrogenase subunit beta; nucleotide binding fold, oxidoreductase; HET: NAP; 2.10A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1pnq_A* 1xlt_C* 2oor_C* 1ptj_C* 2oo5_C*
Probab=73.57 E-value=2.7 Score=34.50 Aligned_cols=85 Identities=16% Similarity=0.310 Sum_probs=58.1
Q ss_pred cEEEcCCCCChh---hHHHHHHHhccCCEEEEEcCCCCccccccc-hh---------hhhcCCCEEEEEcCCCCC-C---
Q 026284 63 TVLDWEDALPPV---EMNPAEENCRMADVVLCLGTSLQITPACNL-PL---------KSLRGGGKIVIVNLQQTP-K--- 125 (240)
Q Consensus 63 ~IV~FGE~lp~~---~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~l-p~---------~a~~~g~~lViIN~q~t~-~--- 125 (240)
+|++=+-.+|.+ +++..-....++|++||||..=.|.|++.- |. .+.+. ..+++++..-.. +
T Consensus 73 NVLLAEA~VPYd~v~EMdeIN~df~~tDv~lVIGANDvvNpaA~~dp~SpI~GMPvl~v~kA-k~ViV~KRsm~~GyAgv 151 (180)
T 1pno_A 73 NVLLAEANVPYDEVFELEEINSSFQTADVAFVIGANDVTNPAAKTDPSSPIYGMPILDVEKA-GTVLFIKRSMASGYAGV 151 (180)
T ss_dssp HHHHHHTTCCGGGEEEHHHHGGGGGGCSEEEEESCCGGGCGGGTTCTTSTTTTCCCCCGGGS-SEEEEEESSSCCCTTCC
T ss_pred eEEEEeeCCCHHHHhhHHHHhhhhhhcCEEEEeccccccCchhccCCCCCcCCCeeechhhC-CEEEEEECCCCCCcCCC
Confidence 566666667765 577777888999999999999999998763 21 22222 245555544222 1
Q ss_pred -----CCcccEEEECcHHHHHHHHHHHh
Q 026284 126 -----DKKASLVVHAPVDKVIAGVMRHL 148 (240)
Q Consensus 126 -----d~~adl~I~g~~devl~~L~~~L 148 (240)
-+.....+.|++.+.+.+|.+.|
T Consensus 152 ~NpLF~~~nt~MlfGDAK~~~~~l~~~l 179 (180)
T 1pno_A 152 ENELFFRNNTMMLFGDAKKMTEQIVQAM 179 (180)
T ss_dssp CCGGGTSTTEEEEESCHHHHHHHHHHHH
T ss_pred cCcceecCCceEEeccHHHHHHHHHHHh
Confidence 12245679999999999999876
No 42
>2nxw_A Phenyl-3-pyruvate decarboxylase; thiamine pyrophosphate, asymmetric dimer of dimers, open ACT loops, lyase; HET: TPP; 1.50A {Azospirillum brasilense} PDB: 2q5j_A* 2q5l_A* 2q5o_A* 2q5q_A*
Probab=71.77 E-value=5 Score=37.93 Aligned_cols=68 Identities=13% Similarity=0.060 Sum_probs=41.6
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhc
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg 149 (240)
.+.+.+++||++|++|+.+.-.....+.... ...++|.|+.++....+. ....-...+++..|.+.+.
T Consensus 282 ~~~~~l~~aDlvl~iG~~~~~~~~~~~~~~~--~~~~~i~i~~d~~~~~~~--~~~~~~~~~~l~~L~~~l~ 349 (565)
T 2nxw_A 282 EITRLVEESDGLFLLGAILSDTNFAVSQRKI--DLRKTIHAFDRAVTLGYH--TYADIPLAGLVDALLERLP 349 (565)
T ss_dssp HHHHHHHTCSEEEEESCCBCSSTTSBCTTTS--CGGGEEEEETTEEEETTE--EEESCCHHHHHHHHHHTSC
T ss_pred HHHHHHHhCCEEEEECCCccccccccccccC--CCCcEEEEeCCceeeCCc--ccCCccHHHHHHHHHHhcc
Confidence 4456778899999999987655544332211 124688888776544332 2333345667777766553
No 43
>1h0h_A Formate dehydrogenase (large subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: b.52.2.2 c.81.1.1
Probab=70.46 E-value=3.2 Score=42.25 Aligned_cols=56 Identities=18% Similarity=0.313 Sum_probs=40.2
Q ss_pred HhccCCEEEEEcCCCCcc-c-cccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcH
Q 026284 82 NCRMADVVLCLGTSLQIT-P-ACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPV 137 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~-P-a~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~ 137 (240)
.+.+||++|++|+-.... | .......++++|+++|.|++..|.....+|++|.=+.
T Consensus 181 D~~~ad~il~~G~N~~~~~p~~~~~~~~a~~~G~klivIDPr~t~ta~~AD~~l~irP 238 (977)
T 1h0h_A 181 DLKNSDVILMMGSNPAENHPISFKWVMRAKDKGATLIHVDPRYTRTSTKCDLYAPLRS 238 (977)
T ss_dssp GGGGCSEEEEESCCHHHHSTTHHHHHHHHHHTTCEEEEECSSCCTTGGGCSEEECCCT
T ss_pred HHhhCCEEEEECCChHHhCcHHHHHHHHHHHCCCeEEEECCCCCchhHHhCeeeccCC
Confidence 367899999999865432 1 1111234667899999999999887778898876443
No 44
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=69.82 E-value=1.8 Score=34.30 Aligned_cols=59 Identities=15% Similarity=-0.013 Sum_probs=44.1
Q ss_pred HHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEECcHH
Q 026284 80 EENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVHAPVD 138 (240)
Q Consensus 80 ~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~g~~d 138 (240)
...+.+-|++|++-.|..-.-.......++++|+++|.| |....+..+.+|+.|.-..+
T Consensus 105 ~~~~~~~Dvvi~iS~sG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l~~~~~ 164 (188)
T 1tk9_A 105 EALGNEKDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNLVVPSD 164 (188)
T ss_dssp HHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEEEESCS
T ss_pred HHhCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEEEeCCC
Confidence 345678899999999998777777777888999988777 44455666667777765443
No 45
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=69.55 E-value=2.3 Score=41.34 Aligned_cols=56 Identities=14% Similarity=0.162 Sum_probs=38.8
Q ss_pred HhccCCEEEEEcCCCCcccc--ccchhhhhcC--CCEEEEEcCCCCCCCCcccEEEECcH
Q 026284 82 NCRMADVVLCLGTSLQITPA--CNLPLKSLRG--GGKIVIVNLQQTPKDKKASLVVHAPV 137 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~Pa--~~lp~~a~~~--g~~lViIN~q~t~~d~~adl~I~g~~ 137 (240)
.+++||++|++|+-....-. ......++++ |+++|.|++..|.....+|.+|.-+.
T Consensus 163 d~~~ad~il~~G~n~~~~~p~~~~~~~~a~~~~~g~klividP~~t~ta~~Ad~~l~irP 222 (723)
T 2nap_A 163 DIDQATCFFIIGSNTSEAHPVLFRRIARRKQVEPGVKIIVADPRRTNTSRIADMHVAFRP 222 (723)
T ss_dssp GGGTCSEEEEESCCHHHHSHHHHHHHHHHHHHCTTCEEEEECSBCCGGGGGCSEEECCCT
T ss_pred hHhHCCEEEEEcCChhHhCcHHHHHHHHHHhhCCCCEEEEEcCcCCchhhhhCeeeecCC
Confidence 35789999999986432211 1111234555 99999999999887778898887543
No 46
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=69.25 E-value=2.6 Score=33.33 Aligned_cols=62 Identities=13% Similarity=0.114 Sum_probs=43.8
Q ss_pred HHHHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEc-CCCCCCCCcccEEEECcH
Q 026284 76 MNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVN-LQQTPKDKKASLVVHAPV 137 (240)
Q Consensus 76 l~~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN-~q~t~~d~~adl~I~g~~ 137 (240)
+......+.+-|++|++.-|....-.......++++|+++|.|- ....+..+.+|+.|.-..
T Consensus 78 ~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~~~ 140 (187)
T 3sho_A 78 LTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDSSVSPPARIADHVLVAAT 140 (187)
T ss_dssp HHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEEEEESCTTSHHHHHCSEEEECCC
T ss_pred HHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCCcchhhCcEEEEecC
Confidence 33334566778999999999987777777778889999988774 344455456676665433
No 47
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=69.21 E-value=4.9 Score=32.78 Aligned_cols=58 Identities=19% Similarity=0.174 Sum_probs=44.6
Q ss_pred HHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEECcH
Q 026284 80 EENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVHAPV 137 (240)
Q Consensus 80 ~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~g~~ 137 (240)
...+.+-|++|++-.|....-.......++++|+++|.| |....+..+.+|+.|.-..
T Consensus 126 ~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~G~~vIaIT~~~~s~La~~aD~~l~~~~ 184 (212)
T 2i2w_A 126 EAVGREGDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGGKMAGTADIEIRVPH 184 (212)
T ss_dssp HHHCCTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEEETTCGGGTTCSSEEEEECC
T ss_pred HhcCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCeEEEEECCCCCchHHhCCEEEEcCC
Confidence 345788899999999998776777777788899988766 4455666777888876655
No 48
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=69.18 E-value=6.8 Score=30.87 Aligned_cols=52 Identities=15% Similarity=0.165 Sum_probs=36.0
Q ss_pred HhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcC-CCCCCCCcccEEE
Q 026284 82 NCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNL-QQTPKDKKASLVV 133 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~-q~t~~d~~adl~I 133 (240)
.+.+-|++|++-.|....-.......++++|+++|.|-- ...+..+.+|+.|
T Consensus 76 ~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l 128 (186)
T 1m3s_A 76 PLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIGKQADLII 128 (186)
T ss_dssp CCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHHCSEEE
T ss_pred CCCCCCEEEEEcCCCCcHHHHHHHHHHHHCCCEEEEEECCCCCchHHhCCEEE
Confidence 456679999999999876666677778889998887733 3334333445444
No 49
>1d4o_A NADP(H) transhydrogenase; nucleotide-binding fold, protein-NADP(H) complex, inverted binding of NADP(H), oxidoreductase; HET: NAP; 1.21A {Bos taurus} SCOP: c.31.1.4
Probab=69.12 E-value=2.7 Score=34.63 Aligned_cols=86 Identities=17% Similarity=0.259 Sum_probs=58.0
Q ss_pred cEEEcCCCCChh---hHHHHHHHhccCCEEEEEcCCCCccccccc-hh---------hhhcCCCEEEEEcCCCCC-C---
Q 026284 63 TVLDWEDALPPV---EMNPAEENCRMADVVLCLGTSLQITPACNL-PL---------KSLRGGGKIVIVNLQQTP-K--- 125 (240)
Q Consensus 63 ~IV~FGE~lp~~---~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~l-p~---------~a~~~g~~lViIN~q~t~-~--- 125 (240)
+|++=+-.+|.+ +++..-....++|++||||..=.|.|++.- |. .+.+. ..+++++..-.. +
T Consensus 72 NVLLAEA~VPYd~v~EMdeIN~df~~tDv~lVIGANDvVNPaA~~dp~SpI~GMPvl~v~kA-k~ViV~KRsm~~GyAgv 150 (184)
T 1d4o_A 72 NVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKS-KQVIVMKRSLGVGYAAV 150 (184)
T ss_dssp HHHHHHHTCCGGGEEEHHHHGGGGGGCSEEEEESCSGGGCTHHHHCTTSTTTTCCCCCGGGS-SCEEEEESSSCCCTTCC
T ss_pred eEEEEEecCCHHHHHhHHHHhhhhhhcCEEEEecCCccCCCccccCCCCCccCCeeeehhhC-CEEEEEECCCCCCcCCC
Confidence 555555556664 577777888999999999999999998753 21 22222 245555544222 1
Q ss_pred C-----CcccEEEECcHHHHHHHHHHHhc
Q 026284 126 D-----KKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 126 d-----~~adl~I~g~~devl~~L~~~Lg 149 (240)
+ +.....+.|++.+.+.+|.+.|.
T Consensus 151 ~NpLF~~~nt~MlfGDAK~~~~~l~~~l~ 179 (184)
T 1d4o_A 151 DNPIFYKPNTAMLLGDAKKTCDALQAKVR 179 (184)
T ss_dssp CCGGGGSTTEEEEESCHHHHHHHHHHHHH
T ss_pred cCcceecCCceEEeccHHHHHHHHHHHHH
Confidence 1 22456799999999999999885
No 50
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=69.01 E-value=2.3 Score=41.41 Aligned_cols=55 Identities=16% Similarity=0.286 Sum_probs=38.9
Q ss_pred HhccCCEEEEEcCCCCcccc--ccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECc
Q 026284 82 NCRMADVVLCLGTSLQITPA--CNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAP 136 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~Pa--~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~ 136 (240)
.+.+||++|++|+-....-. ......++++|+++|.|++..|.....+|.+|.=+
T Consensus 163 di~~ad~il~~G~n~~~~~p~~~~~l~~a~~~G~klividPr~t~ta~~Ad~~l~ir 219 (715)
T 2iv2_X 163 EIDNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRKIETARIADMHIALK 219 (715)
T ss_dssp GGGGCSEEEEESCCHHHHCHHHHHHHHHHHHTTCEEEEECSSCCHHHHTCSEEECCC
T ss_pred HHhcCCEEEEEcCChHHhCHHHHHHHHHHHHCCCeEEEEcCCCCchhHhhCEEeccC
Confidence 45789999999986432211 11123467789999999999887666788887744
No 51
>2fsv_C NAD(P) transhydrogenase subunit beta; NAD(P) transhydrogenase subunits, oxidoreductas; HET: NAD NAP; 2.30A {Rhodospirillum rubrum} SCOP: c.31.1.4 PDB: 1e3t_A* 1hzz_C* 1nm5_C* 1u28_C* 1u2d_C* 1u2g_C* 2fr8_C* 2frd_C*
Probab=68.90 E-value=2.9 Score=34.97 Aligned_cols=86 Identities=16% Similarity=0.330 Sum_probs=58.9
Q ss_pred ccEEEcCCCCChh---hHHHHHHHhccCCEEEEEcCCCCccccccc-hh---------hhhcCCCEEEEEcCCCCC-C--
Q 026284 62 DTVLDWEDALPPV---EMNPAEENCRMADVVLCLGTSLQITPACNL-PL---------KSLRGGGKIVIVNLQQTP-K-- 125 (240)
Q Consensus 62 P~IV~FGE~lp~~---~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~l-p~---------~a~~~g~~lViIN~q~t~-~-- 125 (240)
-+|++=+-.+|.+ ++++.-....++|++||||..=.|.|++.- |. .+.+. ..+++++..-.. +
T Consensus 95 MNVLLAEA~VPYd~v~EMdeIN~df~~tDv~lVIGANDvVNPaA~~dp~SpI~GMPvL~v~kA-k~ViV~KRsm~~GyAg 173 (203)
T 2fsv_C 95 MNVLLAEANVPYDEVFELEEINSSFQTADVAFVIGANDVTNPAAKTDPSSPIYGMPILDVWKA-GTVLFIKRSMASGYAG 173 (203)
T ss_dssp HHHHHHHTTCCGGGEEEHHHHGGGSTTCSEEEEESCCGGGCGGGTSCTTSTTTTCCCCCGGGS-SEEEEEESSSCCCTTC
T ss_pred ccEEEEEecCCHHHHhhHHHHhhhhhhcCEEEEeccccccCchhhcCCCCCcCCCeeeccccC-CEEEEEECCCCCCcCC
Confidence 3666666667765 577777788899999999999999998763 21 22222 245555544322 1
Q ss_pred -C-----CcccEEEECcHHHHHHHHHHHh
Q 026284 126 -D-----KKASLVVHAPVDKVIAGVMRHL 148 (240)
Q Consensus 126 -d-----~~adl~I~g~~devl~~L~~~L 148 (240)
+ +.....+.|++.+.+.+|.+.|
T Consensus 174 v~NpLF~~~nt~MlfGDAK~~~~~l~~~l 202 (203)
T 2fsv_C 174 VENELFFRNNTMMLFGDAKKMTEQIVQAM 202 (203)
T ss_dssp CCCGGGGSTTEEEEESCHHHHHHHHHHHC
T ss_pred CcCcceecCCceEEeccHHHHHHHHHHHh
Confidence 1 2245679999999999999876
No 52
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=68.67 E-value=4.9 Score=32.79 Aligned_cols=59 Identities=12% Similarity=0.041 Sum_probs=45.3
Q ss_pred HHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcc---cEEEECcHH
Q 026284 80 EENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKA---SLVVHAPVD 138 (240)
Q Consensus 80 ~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~a---dl~I~g~~d 138 (240)
...+.+-|++|++-.|....-.......++++|+++|.| +....+..+.+ |+.|.-+.+
T Consensus 109 ~~~~~~~Dvvi~iS~SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~~l~~~~~ 171 (201)
T 3trj_A 109 AALGNEDDILLVITTSGDSENILSAVEEAHDLEMKVIALTGGSGGALQNMYNTDDIELRVPSD 171 (201)
T ss_dssp HHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTCEEEEESCC
T ss_pred HhhCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEECCCCCHHHHhhccCCEEEEeCCC
Confidence 345688899999999999887888888889999998877 44555666667 877765443
No 53
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=67.68 E-value=1.1 Score=29.06 Aligned_cols=29 Identities=17% Similarity=0.048 Sum_probs=18.7
Q ss_pred ccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCC
Q 026284 17 LSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCG 57 (240)
Q Consensus 17 ~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~Cg 57 (240)
....|..||+.++.+|.- --..-+|| .||
T Consensus 2 ~iY~C~rCg~~fs~~el~----------~lP~IrCp--yCG 30 (48)
T 4ayb_P 2 AVYRCGKCWKTFTDEQLK----------VLPGVRCP--YCG 30 (48)
T ss_dssp ---CCCCTTTTCCCCCSC----------CCSSSCCT--TTC
T ss_pred cEEEeeccCCCccHHHHh----------hCCCcccC--ccC
Confidence 346799999998865421 12456899 899
No 54
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=67.50 E-value=3.1 Score=33.18 Aligned_cols=58 Identities=14% Similarity=0.020 Sum_probs=43.5
Q ss_pred HHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEECcHH
Q 026284 81 ENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVHAPVD 138 (240)
Q Consensus 81 ~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~g~~d 138 (240)
..+.+-|++|++-.|....-.......++++|+++|.| |....+..+.+|+.|.-..+
T Consensus 112 ~~~~~~d~vI~iS~SG~t~~~~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad~~l~~~~~ 170 (198)
T 2xbl_A 112 ALGNEGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEVPSA 170 (198)
T ss_dssp HHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECSCCCTHHHHCSEEEECSCS
T ss_pred hhCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCCcHHHhCCEEEEeCCC
Confidence 34678899999999998777777777888999988777 44455655667877765544
No 55
>1eu1_A Dimethyl sulfoxide reductase; molybdenum, molybdenum cofactor, DMSO, molybdopte oxidoreductase; HET: GLC MGD EPE; 1.30A {Rhodobacter sphaeroides} SCOP: b.52.2.2 c.81.1.1 PDB: 4dmr_A* 1dmr_A* 1e5v_A* 1h5n_A* 2dmr_A* 3dmr_A* 1e61_A* 1e60_A* 1e18_A* 1dms_A*
Probab=66.97 E-value=1.7 Score=42.83 Aligned_cols=53 Identities=13% Similarity=0.048 Sum_probs=37.4
Q ss_pred HhccCCEEEEEcCCCCcc-cc---------ccchhhhhcCCCEEEEEcCCCCCCCCcc-cEEEE
Q 026284 82 NCRMADVVLCLGTSLQIT-PA---------CNLPLKSLRGGGKIVIVNLQQTPKDKKA-SLVVH 134 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~-Pa---------~~lp~~a~~~g~~lViIN~q~t~~d~~a-dl~I~ 134 (240)
.+.+||++|++|+-.... |. ......++++|+++|.|++..|.....+ |.+|.
T Consensus 174 d~~~ad~il~~G~N~~~~~~~~~~~~~~~~~~~l~~a~~~G~klivIDPr~t~ta~~aad~~l~ 237 (780)
T 1eu1_A 174 VVENTDLMVFWAADPMKTNEIGWVIPDHGAYAGMKALKEKGTRVIAINPVRTETADYFGADVVS 237 (780)
T ss_dssp HHHHCSEEEEESCCHHHHTTCCSSBCCCHHHHHHHHHHHHTCEEEEESSBCCHHHHHHTCEEEC
T ss_pred HHhhCCEEEEECCCHHHhcCCCCcccccchHHHHHHHHHCCCeEEEECCCCCCcccccCCEEee
Confidence 467899999999865431 22 1123346678999999999988754555 87776
No 56
>2ivf_A Ethylbenzene dehydrogenase alpha-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=66.86 E-value=3.1 Score=42.26 Aligned_cols=55 Identities=16% Similarity=0.217 Sum_probs=40.0
Q ss_pred hccCCEEEEEcCCCCcc--ccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcH
Q 026284 83 CRMADVVLCLGTSLQIT--PACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPV 137 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~--Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~ 137 (240)
+.+||++|++|+-.... +.......++++|+++|.|++..|.....+|++|.=+.
T Consensus 244 ~~nad~Il~~G~N~~~~~p~~~~~~~~ar~~GakvivVDPr~t~ta~~AD~wl~irP 300 (976)
T 2ivf_A 244 LLDAELIFMTCSNWSYTYPSSYHFLSEARYKGAEVVVIAPDFNPTTPAADLHVPVRV 300 (976)
T ss_dssp GGGCSEEEEESCCHHHHCTTTHHHHHHHHHHTCEEEEECSSCCTTGGGCSEEECCCT
T ss_pred HhhCcEEEEeCCChhHcccHHHHHHHHHHHcCCEEEEECCCCCcchhhcCeEeccCC
Confidence 45799999999864322 22233345677899999999998887778898876443
No 57
>1djl_A Transhydrogenase DIII; rossmann fold dinucleotide binding fold reverse binding of N oxidoreductase; HET: NAP; 2.00A {Homo sapiens} SCOP: c.31.1.4 PDB: 1pt9_A* 1u31_A*
Probab=66.57 E-value=14 Score=30.91 Aligned_cols=87 Identities=18% Similarity=0.268 Sum_probs=60.0
Q ss_pred ccEEEcCCCCChh---hHHHHHHHhccCCEEEEEcCCCCccccccc---------h-hhhhcCCCEEEEEcCCCCC-C--
Q 026284 62 DTVLDWEDALPPV---EMNPAEENCRMADVVLCLGTSLQITPACNL---------P-LKSLRGGGKIVIVNLQQTP-K-- 125 (240)
Q Consensus 62 P~IV~FGE~lp~~---~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~l---------p-~~a~~~g~~lViIN~q~t~-~-- 125 (240)
-+|++=+-.+|.+ ++++.-....++|++||||..=.|.|++.- | ..+.+. ..+++++..-.+ +
T Consensus 94 MNVLLAEA~VPYd~v~EMdeIN~df~~tDv~lVIGANDvVNPaA~~dp~SpI~GMPvL~v~kA-k~ViV~KRsm~~GyAg 172 (207)
T 1djl_A 94 LNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKS-KQVIVMKRSLGVGYAA 172 (207)
T ss_dssp HHHHHHHTTCCGGGEEEHHHHGGGGGGCSEEEEESCCGGGCTHHHHCTTSTTTTCCCCCGGGS-SEEEEEESSSCCCTTC
T ss_pred CcEEEEEeCCCHHHHhhHHHHhhhhhhcCEEEEeccccccCCccccCCCCCccCCeeecceec-CEEEEEECCCCCCcCC
Confidence 3666666667765 577777888999999999999999988753 2 122222 245555554322 1
Q ss_pred -C-----CcccEEEECcHHHHHHHHHHHhc
Q 026284 126 -D-----KKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 126 -d-----~~adl~I~g~~devl~~L~~~Lg 149 (240)
+ +.....+.|++.+.+.+|.+.|.
T Consensus 173 v~NpLF~~~nt~MlfGDAK~~~~~l~~~l~ 202 (207)
T 1djl_A 173 VDNPIFYKPNTAMLLGDAKKTCDALQAKVR 202 (207)
T ss_dssp CCCGGGGSTTEEEEESCHHHHHHHHHHHHH
T ss_pred CcCcceecCCceEEeccHHHHHHHHHHHHH
Confidence 1 22456799999999999999886
No 58
>3cf4_G Acetyl-COA decarboxylase/synthase epsilon subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=66.46 E-value=3.3 Score=33.02 Aligned_cols=63 Identities=11% Similarity=0.042 Sum_probs=35.0
Q ss_pred HHhccCCEEEEEcCCC--CccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEEC-cHHHHHHHHHHHhc
Q 026284 81 ENCRMADVVLCLGTSL--QITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHA-PVDKVIAGVMRHLN 149 (240)
Q Consensus 81 ~~~~~aDLvLVIGTSL--~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g-~~devl~~L~~~Lg 149 (240)
+.+++||++|++||.+ .-+....+.... . .++|.|+..-.+ + ....+.+ ...+++..|.+.+.
T Consensus 103 ~~~~~aDlvl~iG~~~~~~~~~t~~~~~~~--~-~~iI~i~~~~~~-~--~~~~~~~l~~~~~l~~L~~~~~ 168 (170)
T 3cf4_G 103 DGNGNYDMIITIGFKKFYINQVLSAAKNFS--N-LKTIAIERGYIQ-N--ATMSFGNLSKADHYAALDELIN 168 (170)
T ss_dssp SSSCCCSEEEEESCCHHHHHHHHHHHHHHC--C-CCEEECSSSCCT-T--SSEECCCCCHHHHHHHHHHHHH
T ss_pred HHhhcCCEEEEECCccCccccccccccccC--C-CeEEEECCCccc-c--hhhhhccCCHHHHHHHHHHHHh
Confidence 4578899999999987 433222221111 2 577766554322 1 1222222 35678887776653
No 59
>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}
Probab=64.51 E-value=4.1 Score=29.54 Aligned_cols=62 Identities=16% Similarity=0.167 Sum_probs=41.9
Q ss_pred cccceecCCCcccchHHHHhhhhh-hh----ccC--------cCCCCCCCCCCCCCcccccEEEcCCCCChhhHHHHHHH
Q 026284 16 LLSCTAILFEKFAHLVEYMRDFEI-ET----IGM--------KKTPRRCSDVKCGSRLKDTVLDWEDALPPVEMNPAEEN 82 (240)
Q Consensus 16 l~~~~C~~C~~~~~~~ey~r~~~~-~~----~~~--------~~~~p~C~~~~CgG~LRP~IV~FGE~lp~~~l~~a~~~ 82 (240)
.+.+.|.-||...++.+.+..+-. ++ ..+ ..-.-+|| .||. -|+|-.||...-++..+.
T Consensus 6 ~~~~~~PlCG~~L~W~eLIeQML~~en~~ei~kDr~~Fl~~~e~F~FkCP--~CgE------EFyG~~Lp~~EaeKVFEL 77 (95)
T 2k5c_A 6 HHMAKCPICGSPLKWEELIEEMLIIENFEEIVKDRERFLAQVEEFVFKCP--VCGE------EFYGKTLPRREAEKVFEL 77 (95)
T ss_dssp --CEECSSSCCEECHHHHHHHSTTCSTHHHHTTCHHHHHHHHHHSEEECT--TTCC------EEETTSSCTTTHHHHHHH
T ss_pred cccccCCcCCCccCHHHHHHHHHhhccHHHHHhhHHHHHHHHHHHhhcCC--CccH------HHhcccCChHHHHHHHHH
Confidence 467899999999998876654311 10 111 12356899 8996 479999998878888777
Q ss_pred hcc
Q 026284 83 CRM 85 (240)
Q Consensus 83 ~~~ 85 (240)
+.+
T Consensus 78 LNd 80 (95)
T 2k5c_A 78 LND 80 (95)
T ss_dssp HHS
T ss_pred HHH
Confidence 654
No 60
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=63.89 E-value=4.8 Score=32.08 Aligned_cols=59 Identities=12% Similarity=0.076 Sum_probs=44.0
Q ss_pred HHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCc---ccEEEECcHH
Q 026284 80 EENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKK---ASLVVHAPVD 138 (240)
Q Consensus 80 ~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~---adl~I~g~~d 138 (240)
...+.+-|++|++-.|....-.......++++|+++|-| |....+..+. +|+.|.-..+
T Consensus 104 ~~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l~~~~~ 166 (196)
T 2yva_A 104 RALGHAGDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIRIPSH 166 (196)
T ss_dssp HHHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEEECSCS
T ss_pred HhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEEEeCCC
Confidence 356788899999999999887888888889999998877 3334444444 7777765443
No 61
>1ti6_A Pyrogallol hydroxytransferase large subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.52.2.2 c.81.1.1 PDB: 1ti2_A* 1ti4_A* 1vld_M* 1vle_M* 1vlf_M*
Probab=62.86 E-value=2 Score=42.94 Aligned_cols=53 Identities=8% Similarity=0.017 Sum_probs=36.6
Q ss_pred HhccCCEEEEEcCCCCccccc-------cchhhhhcCCCEEEEEcCCCCCCCCc-ccEEEE
Q 026284 82 NCRMADVVLCLGTSLQITPAC-------NLPLKSLRGGGKIVIVNLQQTPKDKK-ASLVVH 134 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~Pa~-------~lp~~a~~~g~~lViIN~q~t~~d~~-adl~I~ 134 (240)
.+.+||++|++|+-..-.|.. .+...++++|+++|.|++..|..... +|++|.
T Consensus 205 ~~~~ad~il~~G~Np~~~p~~~~~~~~~~~~~~a~~~G~klivIDPr~t~ta~~~Ad~~l~ 265 (875)
T 1ti6_A 205 GLKHAEMIVFWSSDPETNSGIYAGFESNIRRQWLKDLGVDFVFIDPHMNHTARLVADKWFS 265 (875)
T ss_dssp HHHHCSEEEEESCCHHHHCSSSCTTTTHHHHHHHHHTTCEEEEECSBCCHHHHHHCSEEEC
T ss_pred HHhcCCEEEEECCChhhCCccCCCccchHHHHHHHHcCCeEEEECCCCCCcccccCCEEec
Confidence 467899999999976222331 11122678999999999998865444 577655
No 62
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=62.57 E-value=8.9 Score=30.33 Aligned_cols=50 Identities=10% Similarity=0.234 Sum_probs=35.2
Q ss_pred ccee--EeeeccCCCCCCCCcceEEEeecCCCCcchhcccccCCceEEeeec
Q 026284 178 VKWA--LRVGSVHRPKAPSPFVQSVEVSFSDRPDLKTAILNKQPFKLKRRKQ 227 (240)
Q Consensus 178 ~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~ 227 (240)
-+|+ +.+.+.++..-+..|++.|...+-+.=.---.++.++||.+..+--
T Consensus 33 h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~np~r~v~~pPF~v~e~GW 84 (140)
T 3qrl_A 33 RQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFANPNRTFTDPPFRIEEQGW 84 (140)
T ss_dssp EEEEEEEEEECTTSCEECCTTEEEEEEECCTTSSSCEEEECSTTCCEEEEES
T ss_pred cEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCCCCeEEEcCCCcEEEEEEe
Confidence 5899 7888888877667899999985322211013478899999887643
No 63
>1kqf_A FDH-N alpha, formate dehydrogenase, nitrate-inducible, major S; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1kqg_A*
Probab=61.56 E-value=3.2 Score=42.43 Aligned_cols=54 Identities=15% Similarity=0.291 Sum_probs=38.5
Q ss_pred HhccCCEEEEEcCCCCcc-c-cccchhhhh-cCCCEEEEEcCCCCCCCCcccEEEEC
Q 026284 82 NCRMADVVLCLGTSLQIT-P-ACNLPLKSL-RGGGKIVIVNLQQTPKDKKASLVVHA 135 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~-P-a~~lp~~a~-~~g~~lViIN~q~t~~d~~adl~I~g 135 (240)
.+.+||++|++|+-.... | .......++ ++|+++|.|++..|.....+|++|.=
T Consensus 219 D~~~ad~il~~G~N~~~~~p~~~~~i~~a~~~~GaklivIDPr~t~ta~~AD~~l~i 275 (1015)
T 1kqf_A 219 DIKNANVVMVMGGNAAEAHPVGFRWAMEAKNNNDATLIVVDPRFTRTASVADIYAPI 275 (1015)
T ss_dssp GGGGCSEEEEESCCHHHHSTTTTHHHHHHHHHSCCEEEEECSSCCHHHHTCSEEECC
T ss_pred HHhhCCEEEEECCChhhhCchHHHHHHHHHHHCCCeEEEEeCCCCchhHhhCeeecc
Confidence 467899999999865432 2 111223466 78999999999988766678887764
No 64
>1q16_A Respiratory nitrate reductase 1 alpha chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 3ir7_A* 1y5i_A* 1siw_A* 1y4z_A* 1r27_A* 1y5l_A* 1y5n_A* 3ir6_A* 3ir5_A* 3egw_A*
Probab=61.34 E-value=2.2 Score=44.87 Aligned_cols=54 Identities=17% Similarity=0.185 Sum_probs=38.7
Q ss_pred HhccCCEEEEEcCCCCcc--ccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEEC
Q 026284 82 NCRMADVVLCLGTSLQIT--PACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHA 135 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~--Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g 135 (240)
.+.+||++|++|+-.... +.......++++|+++|.|++..|.....+|++|.=
T Consensus 243 D~~~ad~iv~wGsN~~~t~~~~~~~l~~ar~~G~KvVvIDPr~t~ta~~AD~wl~i 298 (1247)
T 1q16_A 243 DWYNSSYIIAWGSNVPQTRTPDAHFFTEVRYKGTKTVAVTPDYAEIAKLCDLWLAP 298 (1247)
T ss_dssp GGGGCSEEEEESCCHHHHSGGGHHHHHHHGGGTCEEEEECSSCCHHHHHSSEEECC
T ss_pred HHhhCCEEEEECCCchhccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhCCeEEee
Confidence 356899999999965221 223333456778999999999988766678887664
No 65
>2bru_C NAD(P) transhydrogenase subunit beta; paramagnetic transhydrogenase, inner membrane, membrane, oxidoreductase, transmembrane; HET: NAD NAP; NMR {Escherichia coli}
Probab=60.02 E-value=2.3 Score=35.06 Aligned_cols=85 Identities=18% Similarity=0.305 Sum_probs=52.2
Q ss_pred cEEEcCCCCChh---hHHHHHHHhccCCEEEEEcCCCCccccccc-hh---------hhhcCCCEEEEEcCCCCC-C---
Q 026284 63 TVLDWEDALPPV---EMNPAEENCRMADVVLCLGTSLQITPACNL-PL---------KSLRGGGKIVIVNLQQTP-K--- 125 (240)
Q Consensus 63 ~IV~FGE~lp~~---~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~l-p~---------~a~~~g~~lViIN~q~t~-~--- 125 (240)
+|++=+-.+|.+ +++..-....++|++||||..=.|.|++.- |. .+.+ ...+++++..-.. +
T Consensus 80 NVLLAEA~VPYd~v~EMdeIN~df~~tDv~lVIGANDvVNPaA~~dp~SpI~GMPvL~v~k-Ak~ViV~KRsm~~GyAgv 158 (186)
T 2bru_C 80 NVLLAEAKVPYDIVLEMDEINDDFADTDTVLVIGANDTVNPAAQDDPKSPIAGMPVLEVWK-AQNVIVFKRSMNTGYAGV 158 (186)
T ss_dssp HHHHHHHTCCTTTEEESCCCHHHHHHCSEEEECBCGGGGCGGGTTSTTSSSTTCCCCCCTT-SSEEEEECSSSCCSSCCC
T ss_pred eEEEEecCCCHHHHhhHHHHhcccccCCEEEEeccccccCccccCCCCCCcCCCeeecccc-CCEEEEEECCCCCCcCCC
Confidence 344433344443 344555677899999999999999998763 21 1111 1244555444221 1
Q ss_pred -----CCcccEEEECcHHHHHHHHHHHh
Q 026284 126 -----DKKASLVVHAPVDKVIAGVMRHL 148 (240)
Q Consensus 126 -----d~~adl~I~g~~devl~~L~~~L 148 (240)
-+.....+.|++.+.+.+|.+.|
T Consensus 159 ~NpLF~~~nt~MlfGDAK~~~~~l~~~l 186 (186)
T 2bru_C 159 QNPLFFKENTHMLFGDAKASVDAILKAL 186 (186)
T ss_dssp SCTTTBSSSEEEECSCHHHHHHHHHHHC
T ss_pred cCcceecCCceEEeccHHHHHHHHHHhC
Confidence 12245678999999999998764
No 66
>3c2q_A Uncharacterized conserved protein; putative LOR/SDH, structural genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis S2}
Probab=58.27 E-value=4.5 Score=36.44 Aligned_cols=83 Identities=20% Similarity=0.246 Sum_probs=57.0
Q ss_pred CcccccEEEcCCCCChh------hHHHHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCC----C-
Q 026284 58 SRLKDTVLDWEDALPPV------EMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPK----D- 126 (240)
Q Consensus 58 G~LRP~IV~FGE~lp~~------~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~----d- 126 (240)
|.+|+|= .||+- ..+...+++++||++|.+.|-|.-.-..++.. ...+++-|..+|... |
T Consensus 245 GSIRDDG-----PLPdvitdv~~AQ~~mr~~~~~a~~vimlaTmLHSIAtGNm~P----s~v~~~cVDInp~~VtKL~DR 315 (345)
T 3c2q_A 245 GSIRDDG-----PIPDVITDSMVAQDKMRTTVMDKKMVIMLSTLLHSVATGNLMP----SYIKTVCVDIQPSTVTKLMDR 315 (345)
T ss_dssp CCTTCSS-----CCTTCBCBHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHTTCC----TTSEEEEEESCHHHHHHHHHT
T ss_pred eeccCCC-----CCCcccccHHHHHHHHHHHhccCCchHHHHHHHHHHHhcccCc----ccceEEEEECCHHHhhhhhcc
Confidence 6677653 56652 22233446678999999999998777777643 234577776665432 2
Q ss_pred -CcccEEEECcHHHHHHHHHHHhc
Q 026284 127 -KKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 127 -~~adl~I~g~~devl~~L~~~Lg 149 (240)
.....-|-.++..+++.|.+.|.
T Consensus 316 Gs~qa~giVTdvg~Fl~~L~~~L~ 339 (345)
T 3c2q_A 316 GTSQAIGVVTDVGVFLVLLLKELE 339 (345)
T ss_dssp CCSSEEEEESCHHHHHHHHHHHHH
T ss_pred CceeEEEEEecHHHHHHHHHHHHH
Confidence 23457788999999999999885
No 67
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=58.03 E-value=3.1 Score=33.35 Aligned_cols=58 Identities=12% Similarity=0.043 Sum_probs=43.9
Q ss_pred HHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCc---ccEEEECcHH
Q 026284 81 ENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKK---ASLVVHAPVD 138 (240)
Q Consensus 81 ~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~---adl~I~g~~d 138 (240)
..+.+-|++|++-.|....-.......++++|+++|.| |....+..+. +|+.|.-..+
T Consensus 109 ~~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l~~~~~ 170 (199)
T 1x92_A 109 ALGQPGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIRVPSK 170 (199)
T ss_dssp HHCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEEECSCS
T ss_pred hCCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEEEeCCC
Confidence 45788899999999999777777778889999998877 3333445556 7887765543
No 68
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=56.70 E-value=3.4 Score=32.38 Aligned_cols=17 Identities=12% Similarity=-0.263 Sum_probs=13.6
Q ss_pred cccceecCCCcccchHH
Q 026284 16 LLSCTAILFEKFAHLVE 32 (240)
Q Consensus 16 l~~~~C~~C~~~~~~~e 32 (240)
-...+|.+||+.+...+
T Consensus 68 p~~~~C~~CG~~~~~~~ 84 (139)
T 3a43_A 68 EAVFKCRNCNYEWKLKE 84 (139)
T ss_dssp CCEEEETTTCCEEEGGG
T ss_pred CCcEECCCCCCEEeccc
Confidence 34789999999988755
No 69
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=55.01 E-value=9.7 Score=37.73 Aligned_cols=28 Identities=18% Similarity=0.101 Sum_probs=23.5
Q ss_pred cCCCEEEEEcCCCCCCCCcccEEEECcH
Q 026284 110 RGGGKIVIVNLQQTPKDKKASLVVHAPV 137 (240)
Q Consensus 110 ~~g~~lViIN~q~t~~d~~adl~I~g~~ 137 (240)
++|+++|.|++..|.....+|.++.-..
T Consensus 443 ~~g~klividPr~t~ta~~Ad~~l~i~P 470 (783)
T 3i9v_3 443 RRTDKMALFAPYRAPLMKWAAIHEVHRP 470 (783)
T ss_dssp CCTTSEEEEESSCCGGGTTCSEEEECCS
T ss_pred cCCCEEEEEeCCcchhhHhhcceEecCC
Confidence 6789999999999988888998876443
No 70
>1tmo_A TMAO reductase, trimethylamine N-oxide reductase; oxidoreductase, oxotransferase, molybdoenzyme, MO-cofactor, molybdenum; HET: 2MD; 2.50A {Shewanella massilia} SCOP: b.52.2.2 c.81.1.1
Probab=54.63 E-value=4 Score=40.43 Aligned_cols=52 Identities=6% Similarity=0.016 Sum_probs=36.8
Q ss_pred hccCCEEEEEcCCCCcc-c---------cccchhhhhc---CCC-EEEEEcCCCCCCCCcc-cEEEE
Q 026284 83 CRMADVVLCLGTSLQIT-P---------ACNLPLKSLR---GGG-KIVIVNLQQTPKDKKA-SLVVH 134 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~-P---------a~~lp~~a~~---~g~-~lViIN~q~t~~d~~a-dl~I~ 134 (240)
+.+||++|++|+-.... | .......+++ +|+ ++|.|++..|.....+ |.+|.
T Consensus 208 ~~~ad~il~~G~Np~~~~~~~~~~~~~~~~~~~~~a~~~~~~G~~klivIDPr~t~ta~~a~d~~l~ 274 (829)
T 1tmo_A 208 LEHSDTIVLWSNDPYKNLQVGWNAETHESFAYLAQLKEKVKQGKIRVISIDPVVTKTQAYLGCEQLY 274 (829)
T ss_dssp HHHCSEEEEESCCHHHHTSCCSSBCCCTHHHHHHHHHHHHHHTSSEEEEECSSCCHHHHHHTCEEEC
T ss_pred HhhCCEEEEECCChhhccccccccccchHHHHHHHHHHHhhCCCceEEEECCCCCCcchhhcCEEec
Confidence 67899999999965421 1 1122234566 899 9999999988765666 77774
No 71
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=54.45 E-value=4.9 Score=31.58 Aligned_cols=55 Identities=13% Similarity=0.073 Sum_probs=40.2
Q ss_pred HhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEECc
Q 026284 82 NCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVHAP 136 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~g~ 136 (240)
.+.+-|++|++-.|..-.-.......++++|+++|.| |....+..+.+|+.|.-.
T Consensus 93 ~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~la~~ad~~l~~~ 148 (183)
T 2xhz_A 93 MVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSMARAADVHLCVK 148 (183)
T ss_dssp TCCTTCEEEEECSSSCCHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHSSEEEECC
T ss_pred cCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChhHHhCCEEEEeC
Confidence 4567799999999998777777777888999988777 334445545566666543
No 72
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=53.61 E-value=20 Score=29.37 Aligned_cols=54 Identities=15% Similarity=0.220 Sum_probs=37.9
Q ss_pred CcccceeEeeeccCCCCCCCCcceEEEeecCCCCcchhcccccCCceEEeeeccc
Q 026284 175 DKYVKWALRVGSVHRPKAPSPFVQSVEVSFSDRPDLKTAILNKQPFKLKRRKQIT 229 (240)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 229 (240)
...-+|++-+.+.++..-+ .|++.|...+-+.=.-.-.++.++||.+..+---.
T Consensus 30 ~~TH~WtVyVr~~~~edis-~~v~KV~F~LHpSF~np~Rvv~~PPFevtE~GWGe 83 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDIS-YFIKKVVFKLHDTYPNPVRSIEAPPFELTETGWGE 83 (175)
T ss_dssp TCCEEEEEEEECGGGCCCT-TTEEEEEEECCTTSSSCEEEECSSSEEEEEEESSC
T ss_pred CCcEEEEEEEECCCCCChh-heEEEEEEEcCCCCCCCcEEEeCCCCEEEEeEEee
Confidence 4668899999888776543 79999999644331112347889999998765433
No 73
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=52.00 E-value=10 Score=29.56 Aligned_cols=53 Identities=11% Similarity=0.074 Sum_probs=38.5
Q ss_pred HhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEEC
Q 026284 82 NCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVHA 135 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~g 135 (240)
.+.+-|++|++-.|....-.......++++|+++|.| |.... ..+.+|+.|.-
T Consensus 79 ~~~~~d~vi~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s-l~~~ad~~l~~ 132 (180)
T 1jeo_A 79 SYEKDDLLILISGSGRTESVLTVAKKAKNINNNIIAIVCECGN-VVEFADLTIPL 132 (180)
T ss_dssp CCCTTCEEEEEESSSCCHHHHHHHHHHHTTCSCEEEEESSCCG-GGGGCSEEEEC
T ss_pred cCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCh-HHHhCCEEEEe
Confidence 3566799999999998766666777788899988777 33334 66667776653
No 74
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=51.49 E-value=7.7 Score=29.24 Aligned_cols=27 Identities=15% Similarity=0.155 Sum_probs=20.0
Q ss_pred ccceecCCCcccchHHHHhhhhhhhccCcCCCC-CCCCCCCCCc
Q 026284 17 LSCTAILFEKFAHLVEYMRDFEIETIGMKKTPR-RCSDVKCGSR 59 (240)
Q Consensus 17 ~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p-~C~~~~CgG~ 59 (240)
...+|..||+.+... .... .|| .||+.
T Consensus 72 ~~~~C~~CG~~~e~~--------------~~~~~~CP--~Cgs~ 99 (119)
T 2kdx_A 72 VELECKDCSHVFKPN--------------ALDYGVCE--KCHSK 99 (119)
T ss_dssp CEEECSSSSCEECSC--------------CSTTCCCS--SSSSC
T ss_pred ceEEcCCCCCEEeCC--------------CCCCCcCc--cccCC
Confidence 368899999987752 1245 799 89976
No 75
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=51.44 E-value=3.2 Score=33.64 Aligned_cols=55 Identities=24% Similarity=0.231 Sum_probs=40.1
Q ss_pred HhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcC-CCCCCCCcccEEEECc
Q 026284 82 NCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNL-QQTPKDKKASLVVHAP 136 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~-q~t~~d~~adl~I~g~ 136 (240)
.+.+-|++|++--|....-...+...++++|+++|.|-- ...+..+.+|+.|.-.
T Consensus 86 ~~~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~ad~~l~~~ 141 (200)
T 1vim_A 86 RITDQDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSLAKMADVVMVVK 141 (200)
T ss_dssp CCCTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEESCTTSHHHHHCSEEEECC
T ss_pred CCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCeEEEEECCCCChHHHhCCEEEEEC
Confidence 356679999999999877777777888889999887733 3445545567666543
No 76
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=51.08 E-value=5.8 Score=31.81 Aligned_cols=54 Identities=13% Similarity=0.115 Sum_probs=40.3
Q ss_pred HhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEc-CCCCCCCCcccEEEEC
Q 026284 82 NCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVN-LQQTPKDKKASLVVHA 135 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN-~q~t~~d~~adl~I~g 135 (240)
.+.+-|++|++-.|....-.......++++|+++|.|- ....+..+.+|+.|.-
T Consensus 89 ~~~~~dvvI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~ 143 (201)
T 3fxa_A 89 VLQKEDILILISKGGNTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPV 143 (201)
T ss_dssp GCCTTCEEEEECSSSCCHHHHTTHHHHHHHTCEEEEEESCTTSHHHHHCSEEEEC
T ss_pred cCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCeEEEEECCCCChhHHhCCEEEEc
Confidence 45677999999999987777777788888999988874 3444554556766653
No 77
>3szu_A ISPH, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; 3Fe-4S iron-sulfur cluster, conserved cysteine, IPP and DMAP production final STEP; HET: H6P; 1.40A {Escherichia coli} PDB: 3szl_A* 3f7t_A* 3szo_A* 3t0f_A* 3t0g_A* 3urk_A* 3utc_A* 3utd_A* 3uv3_A* 3uv6_A* 3uv7_A* 3uwm_A* 3ke8_A* 3ke9_A* 3kef_A* 3kel_A 3kem_A*
Probab=50.12 E-value=14 Score=33.17 Aligned_cols=74 Identities=18% Similarity=0.236 Sum_probs=48.4
Q ss_pred hHHHHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCC-C---CCCcccEEEECcH---HHHHHHHHHH
Q 026284 75 EMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQT-P---KDKKASLVVHAPV---DKVIAGVMRH 147 (240)
Q Consensus 75 ~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t-~---~d~~adl~I~g~~---devl~~L~~~ 147 (240)
..+.+.+.++++|++||||..-. .-..+|...|.+.|.+.+.|.-..- . +.....+-|-+.+ +.++.++.++
T Consensus 215 RQ~av~~lA~~vD~miVVGg~nS-SNT~rL~eia~~~g~~ty~Ie~~~el~~~wl~g~~~VGITAGASTP~~lieeVi~~ 293 (328)
T 3szu_A 215 RQEAVRALAEQAEVVLVVGSKNS-SNSNRLAELAQRMGKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVAR 293 (328)
T ss_dssp HHHHHHHHHHHCSEEEEECCTTC-HHHHHHHHHHHHTTCEEEEESSGGGCCHHHHTTCSEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCEEEEeCCCCC-chHHHHHHHHHHhCCCEEEeCChHHCCHHHhCCCCEEEEeecCCCCHHHHHHHHHH
Confidence 34556677788999999998644 5667788888888888888854321 1 2233345555433 4566666666
Q ss_pred hc
Q 026284 148 LN 149 (240)
Q Consensus 148 Lg 149 (240)
|.
T Consensus 294 l~ 295 (328)
T 3szu_A 294 LQ 295 (328)
T ss_dssp HH
T ss_pred HH
Confidence 63
No 78
>3ml1_A NAPA, periplasmic nitrate reductase; heterodimer, oxidoreductase; HET: MGD HEC; 1.60A {Ralstonia eutropha} PDB: 3o5a_A* 1ogy_A* 2nya_A*
Probab=48.55 E-value=11 Score=37.42 Aligned_cols=67 Identities=10% Similarity=0.092 Sum_probs=42.4
Q ss_pred HhccCCEEEEEcCCCCcc-cc-ccchhhhh--cCCCEEEEEcCCCCCCCCcccEEEECc--HHHH-HHHHHHHh
Q 026284 82 NCRMADVVLCLGTSLQIT-PA-CNLPLKSL--RGGGKIVIVNLQQTPKDKKASLVVHAP--VDKV-IAGVMRHL 148 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~-Pa-~~lp~~a~--~~g~~lViIN~q~t~~d~~adl~I~g~--~dev-l~~L~~~L 148 (240)
.+.+||++|++|+-.... |. ..-...++ ++|+++|.|++..|.....+|++|.=+ .|.+ +-.|++.|
T Consensus 175 d~~~ad~il~~G~N~~~~~p~~~~~i~~a~~~~~G~klivIDPr~t~ta~~AD~~l~irPGtD~aL~~~m~~~i 248 (802)
T 3ml1_A 175 DFEAADAFVLWGSNMAEMHPILWTRVTDRRLSHPKTRVVVLSTFTHRCFDLADIGIIFKPQTDLAMLNYIANYI 248 (802)
T ss_dssp GGGTCSEEEEESCCHHHHSHHHHHHHHHHHHHSTTCEEEEEESSBCGGGGTCSEEEECCTTTHHHHHHHHHHHH
T ss_pred HHhhCCEEEEECCChHHhChHHHHHHHHHHHhcCCCEEEEEeCCCCchhHHhccEeccCCCHHHHHHHHHHHHH
Confidence 467899999999964321 11 01111232 479999999999998777788877643 3333 33444444
No 79
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=46.86 E-value=56 Score=25.92 Aligned_cols=73 Identities=8% Similarity=0.014 Sum_probs=47.8
Q ss_pred hhHHHHHHHhccCCEEEEE-----cCCCCccccccchhhhhcCCCEEEEEcCCCC----------------------CC-
Q 026284 74 VEMNPAEENCRMADVVLCL-----GTSLQITPACNLPLKSLRGGGKIVIVNLQQT----------------------PK- 125 (240)
Q Consensus 74 ~~l~~a~~~~~~aDLvLVI-----GTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t----------------------~~- 125 (240)
..++.-.+++++||++|.+ |......-+..+ ..|...|.|++.+..... +.
T Consensus 56 ~i~~~d~~~i~~aD~vVA~ldpf~g~~~D~GTafEi-GyA~AlgKPVi~l~~d~r~~~~~~~~~~d~~g~~vedf~~~~N 134 (161)
T 2f62_A 56 DIRQKNIQMIKDCDAVIADLSPFRGHEPDCGTAFEV-GCAAALNKMVLTFTSDRRNMREKYGSGVDKDNLRVEGFGLPFN 134 (161)
T ss_dssp HHHHHHHHHHHHCSEEEEECCCCSSSSCCHHHHHHH-HHHHHTTCEEEEECSCCSCHHHHHTSSBCTTSCBCCCSSCSSC
T ss_pred HHHHHHHHHHHhCCEEEEEecCCCCCCCCCcHHHHH-HHHHHCCCEEEEEEcCchhhhhhcccccccccccccccCCcch
Confidence 4566668899999999999 445443333333 346678999999865421 10
Q ss_pred ---CCcccEEEECcHHHHHHHHHHHhc
Q 026284 126 ---DKKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 126 ---d~~adl~I~g~~devl~~L~~~Lg 149 (240)
..... +..+.++.+..|.++|.
T Consensus 135 LMl~~~~~--~~~~~~~~l~~l~~~~~ 159 (161)
T 2f62_A 135 LMLYDGVE--VFDSFESAFKYFLANFP 159 (161)
T ss_dssp GGGCCSSC--EESSHHHHHHHHHHHSC
T ss_pred hhhhhhhe--eeCCHHHHHHHHHHhhc
Confidence 11122 67888999988888764
No 80
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=46.39 E-value=14 Score=32.69 Aligned_cols=87 Identities=11% Similarity=0.028 Sum_probs=54.7
Q ss_pred ccEEEcCCCCCh--hhHHHHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCC----CCCCCcccEEEEC
Q 026284 62 DTVLDWEDALPP--VEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQ----TPKDKKASLVVHA 135 (240)
Q Consensus 62 P~IV~FGE~lp~--~~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~----t~~d~~adl~I~g 135 (240)
|++..|++-=.. ...+.+.+.+.++|++||||..-. .-..+|...|.+.|.+.+.|.-.. .-+.....+-|-+
T Consensus 184 p~~~~~~tIC~AT~~RQ~av~~la~~~D~miVVGg~nS-SNT~rL~eia~~~~~~ty~Ie~~~el~~~wl~~~~~VGITA 262 (297)
T 3dnf_A 184 KEVKVINTICNATSLRQESVKKLAPEVDVMIIIGGKNS-GNTRRLYYISKELNPNTYHIETAEELQPEWFRGVKRVGISA 262 (297)
T ss_dssp SEEEEECCCCSHHHHHHHHHHHHGGGSSEEEEESCTTC-HHHHHHHHHHHHHCSSEEEESSGGGCCGGGGTTCSEEEEEE
T ss_pred CCCCCCCCccHHHHHHHHHHHHHHhhCCEEEEECCCCC-chhHHHHHHHHhcCCCEEEeCChHHCCHHHhCCCCEEEEee
Confidence 456666554232 245566778889999999998543 556777777888888888885432 1123333455554
Q ss_pred cH---HHHHHHHHHHhc
Q 026284 136 PV---DKVIAGVMRHLN 149 (240)
Q Consensus 136 ~~---devl~~L~~~Lg 149 (240)
.+ +.++.++.++|.
T Consensus 263 GASTP~~li~eVi~~l~ 279 (297)
T 3dnf_A 263 GASTPDWIIEQVKSRIQ 279 (297)
T ss_dssp CTTCCHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHH
Confidence 43 456677777763
No 81
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=43.96 E-value=9.3 Score=31.45 Aligned_cols=55 Identities=13% Similarity=0.199 Sum_probs=39.8
Q ss_pred HHhccCCEEEEEcCCCCccccccchhhhhc--CCCEEEEEc-CCCCCCCCcccEEEEC
Q 026284 81 ENCRMADVVLCLGTSLQITPACNLPLKSLR--GGGKIVIVN-LQQTPKDKKASLVVHA 135 (240)
Q Consensus 81 ~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~--~g~~lViIN-~q~t~~d~~adl~I~g 135 (240)
..+.+-|++|++-.|....-.......+++ +|+++|.|- ....+..+.+|+.|.-
T Consensus 102 ~~~~~~DlvI~iS~SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~La~~aD~~l~~ 159 (220)
T 3etn_A 102 GILQENDLLLLISNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLST 159 (220)
T ss_dssp GGCCTTCEEEEECSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHSSEEEEC
T ss_pred ccCCCCCEEEEEcCCCCCHHHHHHHHHHHhcCCCCeEEEEECCCCChhHHhCCEEEEc
Confidence 355678999999999987777777777888 999988773 4444544556666553
No 82
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=42.97 E-value=15 Score=25.44 Aligned_cols=27 Identities=22% Similarity=0.415 Sum_probs=19.2
Q ss_pred ccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCC
Q 026284 17 LSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGS 58 (240)
Q Consensus 17 ~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG 58 (240)
....|..||..+++. .....+|+ .||.
T Consensus 27 v~Y~C~~CG~~~e~~-------------~~d~irCp--~CG~ 53 (70)
T 1twf_L 27 LKYICAECSSKLSLS-------------RTDAVRCK--DCGH 53 (70)
T ss_dssp CCEECSSSCCEECCC-------------TTSTTCCS--SSCC
T ss_pred EEEECCCCCCcceeC-------------CCCCccCC--CCCc
Confidence 346899999887652 12346899 8997
No 83
>3os4_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel; HET: MSE; 1.60A {Yersinia pestis}
Probab=41.63 E-value=26 Score=32.29 Aligned_cols=82 Identities=17% Similarity=0.106 Sum_probs=52.5
Q ss_pred EEEcCCCCChhhHHHHHHHhccCC-EEEEEcCCCCc----cccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHH
Q 026284 64 VLDWEDALPPVEMNPAEENCRMAD-VVLCLGTSLQI----TPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVD 138 (240)
Q Consensus 64 IV~FGE~lp~~~l~~a~~~~~~aD-LvLVIGTSL~V----~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~d 138 (240)
.+.|++.|+++.+....+.++.+- ...=|||+|.. .|+-+++. |++.+|-+|+-+-+...-.+-+.-.
T Consensus 310 ~Ii~SdgLde~~i~~l~~~~~~~~~d~fGVGT~L~~~~~~~~~l~~V~-------Klv~~~G~P~~KlSd~~~K~~~~~~ 382 (407)
T 3os4_A 310 VLVFSDNLDLEKALFLYRHFYQRIKLVFGIGTRLTCDIPDVKPLNIVI-------KLVECNDKPVAKLSDSPGKTICQDP 382 (407)
T ss_dssp EEEECSSCCHHHHHHHHHHHTTTSEEEEEECHHHHSCCTTCCCCCEEE-------EEEEETTEECCCCCSSTTCCCCCCH
T ss_pred EEEECCCCCHHHHHHHHHHhcCCCCcEEeechheeeCCCCCCCcceEE-------EEEEECCcceeEecCCCccccCCCH
Confidence 588999999987777766555554 58999999964 24444332 7888887766432211122333345
Q ss_pred HHHHHHHHHhcccC
Q 026284 139 KVIAGVMRHLNLWI 152 (240)
Q Consensus 139 evl~~L~~~Lg~~i 152 (240)
+.+..+.+.+|++-
T Consensus 383 ~~~~~~~~~~~~~~ 396 (407)
T 3os4_A 383 AFVDQLRKAFALPL 396 (407)
T ss_dssp HHHHHHHHHTTCC-
T ss_pred HHHHHHHHHcCCCc
Confidence 66677777888753
No 84
>1ytl_A Acetyl-COA decarboxylase/synthase complex epsilon 2; structural genomics; 1.80A {Archaeoglobus fulgidus} SCOP: c.31.1.6
Probab=41.28 E-value=7.3 Score=31.61 Aligned_cols=36 Identities=14% Similarity=0.047 Sum_probs=22.1
Q ss_pred ccCCEEEEEcCCCC--ccccccchhhhhcCCCEEEEEcCC
Q 026284 84 RMADVVLCLGTSLQ--ITPACNLPLKSLRGGGKIVIVNLQ 121 (240)
Q Consensus 84 ~~aDLvLVIGTSL~--V~Pa~~lp~~a~~~g~~lViIN~q 121 (240)
.+|||+|+||+.+. ......+-..+ .++++|.||..
T Consensus 107 ~~aDLvI~iG~rf~~~~~~t~~~~~fa--p~akii~Idk~ 144 (174)
T 1ytl_A 107 GNYDLVLMLGSIYYHGSQMLAAIKNFA--PHIRALAIDRY 144 (174)
T ss_dssp CCCSEEEEESCCHHHHHHHHHHHHHHC--TTCEEEECSSS
T ss_pred CCCCEEEEECCcCCccccccccccccC--CCCeEEEeCCC
Confidence 79999999999873 22111221112 35788888643
No 85
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=39.52 E-value=11 Score=31.37 Aligned_cols=52 Identities=17% Similarity=0.235 Sum_probs=39.5
Q ss_pred hccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCC-CC-----------CCCCcccEEEE
Q 026284 83 CRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQ-QT-----------PKDKKASLVVH 134 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q-~t-----------~~d~~adl~I~ 134 (240)
+.+-|++|++-.|....-.......|+++|+++|-|--. .. ++.+.+|+.|.
T Consensus 106 ~~~~Dv~I~iS~SG~t~~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l~ 169 (243)
T 3cvj_A 106 VTNKDVIMIISNSGRNTVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLD 169 (243)
T ss_dssp CCTTCEEEEECSSCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEE
T ss_pred CCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEEE
Confidence 567899999999999777778888889999999877332 22 45556777764
No 86
>1vlp_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.17.2 d.41.2.2
Probab=39.03 E-value=30 Score=32.08 Aligned_cols=86 Identities=13% Similarity=0.086 Sum_probs=53.3
Q ss_pred EEEcCCCCChhhHHHHHHHh-ccC-CEEEEEcCCCCc-----------cccccchhhhhcCCCEEEEEcCCCCCCCCccc
Q 026284 64 VLDWEDALPPVEMNPAEENC-RMA-DVVLCLGTSLQI-----------TPACNLPLKSLRGGGKIVIVNLQQTPKDKKAS 130 (240)
Q Consensus 64 IV~FGE~lp~~~l~~a~~~~-~~a-DLvLVIGTSL~V-----------~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~ad 130 (240)
++.|++.|+++.+....+++ +.+ -...=|||.|.. .|+.+++. |++.+|-+|.-+-+..-
T Consensus 335 ~Ii~SdgLd~~~i~~l~~~~~~~~~~d~FGVGT~L~~~~~~~~~~~~~~~~l~~V~-------Klv~~nG~p~~KlS~~~ 407 (441)
T 1vlp_A 335 IICYSDSLNVEKAITYSHAAKENGMLATFGIGTNFTNDFRKKSEPQVKSEPLNIVI-------KLLEVNGNHAIKISDNL 407 (441)
T ss_dssp EEEECSSCCHHHHHHHHHHHHHTTCEEEEEECHHHHSCEECSSSTTSEECCCCEEE-------EEEEETTEECCBCCSST
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCceEEEEeCchheecccccccccCCCCCcceEE-------EEEEECCeeeEEecCCC
Confidence 58899999998777777665 223 377889999875 23434332 78888887664321111
Q ss_pred EEEECcHHHHHHHHHHHhcccCCCCcc
Q 026284 131 LVVHAPVDKVIAGVMRHLNLWIPPYVR 157 (240)
Q Consensus 131 l~I~g~~devl~~L~~~Lg~~iP~~~~ 157 (240)
-.+-++ .+.+.++-+.+++.-..|..
T Consensus 408 ~K~t~~-~~~~~~~~~~~~~~~~~~~~ 433 (441)
T 1vlp_A 408 GKNMGD-PATVKRVKEELGYTERSWSG 433 (441)
T ss_dssp TCCBSC-HHHHHHHHHHTTCC------
T ss_pred CCccCC-HHHHHHHHHHcCCchhhhcc
Confidence 134566 77888888888884444544
No 87
>4hl7_A Naprtase, nicotinate phosphoribosyltransferase; structural genomics, protein structure initiative; 1.80A {Vibrio cholerae}
Probab=39.01 E-value=25 Score=32.86 Aligned_cols=81 Identities=14% Similarity=0.064 Sum_probs=50.0
Q ss_pred EEEcCCCCChhhHHHHHHHhccC-CEEEEEcCCCCc------------cccccchhhhhcCCCEEEEEcCCCCCCCCccc
Q 026284 64 VLDWEDALPPVEMNPAEENCRMA-DVVLCLGTSLQI------------TPACNLPLKSLRGGGKIVIVNLQQTPKDKKAS 130 (240)
Q Consensus 64 IV~FGE~lp~~~l~~a~~~~~~a-DLvLVIGTSL~V------------~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~ad 130 (240)
++.|.+.|+++.+....+.++.+ -...=|||+|.- .|+.+++. |++.+|-+|+-+-+..-
T Consensus 320 ~Iv~SdgLde~~i~~L~~~~~~~~~d~FGVGT~L~~~~~~~~~~~~~~~~~l~~Vy-------KLve~~G~P~~KlSd~~ 392 (446)
T 4hl7_A 320 LFIFSDGLDFDQALELCEYFAGRVKISFGIGTFLTNDLANWRNAAGVEYRPLSIVI-------KLAECQGRPVAKISDQP 392 (446)
T ss_dssp EEEECSSCCHHHHHHHHHHHTTTSEEEEEECHHHHSCCTTCBCTTCCBCCCCEEEE-------EEEEETTEECCBCCSSG
T ss_pred EEEEcCCCCHHHHHHHHHHhcCCCCcEEEeccceeccCcccccccccCCCCceeEE-------EEEEECCcceeEecCCc
Confidence 58899999998776666555544 358899999874 23333322 68888877654311111
Q ss_pred EEEECcHHHHHHHHHHHhccc
Q 026284 131 LVVHAPVDKVIAGVMRHLNLW 151 (240)
Q Consensus 131 l~I~g~~devl~~L~~~Lg~~ 151 (240)
-.+-+.-.+++..+-+.+|++
T Consensus 393 gK~t~~d~~~~~~~k~~f~~~ 413 (446)
T 4hl7_A 393 EKAMCEDPIFLANLKRRFNIE 413 (446)
T ss_dssp GGCBCSCHHHHHHHHHHTTCC
T ss_pred ccccCCCHHHHHHHHHHcCCc
Confidence 112244456666777777763
No 88
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=38.89 E-value=1.5e+02 Score=23.81 Aligned_cols=58 Identities=12% Similarity=-0.073 Sum_probs=37.7
Q ss_pred ccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhc
Q 026284 84 RMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 84 ~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg 149 (240)
...|-+|+.++.. ......+.+.|.|+|.+|....... .+ .|.-+-.+....++++|-
T Consensus 62 ~~vdgiIi~~~~~-----~~~~~~l~~~~iPvV~i~~~~~~~~--~~-~V~~D~~~~g~~a~~~L~ 119 (276)
T 3jy6_A 62 RGFDGLILQSFSN-----PQTVQEILHQQMPVVSVDREMDACP--WP-QVVTDNFEAAKAATTAFR 119 (276)
T ss_dssp TTCSEEEEESSCC-----HHHHHHHHTTSSCEEEESCCCTTCS--SC-EEECCHHHHHHHHHHHHH
T ss_pred CCCCEEEEecCCc-----HHHHHHHHHCCCCEEEEecccCCCC--CC-EEEEChHHHHHHHHHHHH
Confidence 5699999999876 2333445678999999987654321 22 355566666666666653
No 89
>1e8j_A Rubredoxin; iron-sulfur-protein, zinc-substitution, thermostability; NMR {Desulfovibrio gigas} SCOP: g.41.5.1 PDB: 1rdg_A 2dsx_A 1spw_A
Probab=37.05 E-value=16 Score=23.83 Aligned_cols=14 Identities=0% Similarity=-0.384 Sum_probs=11.5
Q ss_pred ccceecCCCcccch
Q 026284 17 LSCTAILFEKFAHL 30 (240)
Q Consensus 17 ~~~~C~~C~~~~~~ 30 (240)
.+.+|..||..|+-
T Consensus 2 ~~y~C~~CGyvYd~ 15 (52)
T 1e8j_A 2 DIYVCTVCGYEYDP 15 (52)
T ss_dssp CCEECSSSCCCCCT
T ss_pred CcEEeCCCCeEEcC
Confidence 46789999999874
No 90
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=36.77 E-value=24 Score=24.04 Aligned_cols=28 Identities=21% Similarity=0.343 Sum_probs=19.7
Q ss_pred ccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCCc
Q 026284 17 LSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGSR 59 (240)
Q Consensus 17 ~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG~ 59 (240)
-...|..||..++++ ....-+|+ .||..
T Consensus 20 v~Y~C~~Cg~~~~l~-------------~~~~iRC~--~CG~R 47 (63)
T 3h0g_L 20 MIYLCADCGARNTIQ-------------AKEVIRCR--ECGHR 47 (63)
T ss_dssp CCCBCSSSCCBCCCC-------------SSSCCCCS--SSCCC
T ss_pred eEEECCCCCCeeecC-------------CCCceECC--CCCcE
Confidence 346799999887643 12457899 89963
No 91
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=36.74 E-value=25 Score=29.81 Aligned_cols=48 Identities=15% Similarity=0.072 Sum_probs=31.0
Q ss_pred CeEEecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCCcccccEEEcCCCCC
Q 026284 7 CVLEYQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGSRLKDTVLDWEDALP 72 (240)
Q Consensus 7 kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG~LRP~IV~FGE~lp 72 (240)
-|+.++| ..|..|+-..+...|..-. ....+..|| +||- |++|.+...
T Consensus 192 avv~v~~-----~~C~GC~~~lppq~~~~i~------~~~~Iv~Cp--~CgR-----IL~~~~~~~ 239 (256)
T 3na7_A 192 SIVTIKK-----QACGGCFIRLNDKIYTEVL------TSGDMITCP--YCGR-----ILYAEGAYE 239 (256)
T ss_dssp SEEECBT-----TBCTTTCCBCCHHHHHHHH------HSSSCEECT--TTCC-----EEECSCC--
T ss_pred eEEEeeC-----CccCCCCeeeCHHHHHHHH------CCCCEEECC--CCCe-----eEEeCcchh
Confidence 4667777 4799999888876654321 124678899 9994 556665543
No 92
>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...
Probab=36.27 E-value=34 Score=22.46 Aligned_cols=14 Identities=7% Similarity=-0.119 Sum_probs=11.6
Q ss_pred ccceecCCCcccch
Q 026284 17 LSCTAILFEKFAHL 30 (240)
Q Consensus 17 ~~~~C~~C~~~~~~ 30 (240)
.+.+|..||..|+-
T Consensus 2 ~~y~C~vCGyvYd~ 15 (54)
T 4rxn_A 2 KKYTCTVCGYIYDP 15 (54)
T ss_dssp CCEEETTTCCEECT
T ss_pred CceECCCCCeEECC
Confidence 45789999999884
No 93
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=36.22 E-value=39 Score=26.78 Aligned_cols=47 Identities=17% Similarity=0.056 Sum_probs=31.7
Q ss_pred hhhHHHHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcC
Q 026284 73 PVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNL 120 (240)
Q Consensus 73 ~~~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~ 120 (240)
...++.-.+++.+||++|.+++.....-+..+ ..|...|.|++.+..
T Consensus 56 ~~i~~~d~~~i~~aD~vvA~l~~~d~Gt~~Ei-G~A~algkPV~~l~~ 102 (152)
T 4fyk_A 56 QFIHEQNLNWLQQADVVVAEVTQPSLGVGYEL-GRAVALGKPILCLFR 102 (152)
T ss_dssp HHHHHHHHHHHHHCSEEEEECSSCCHHHHHHH-HHHHHTTCCEEEEEC
T ss_pred HHHHHHHHHHHHHCCEEEEeCCCCCCCHHHHH-HHHHHcCCeEEEEEe
Confidence 34556678899999999999994332222222 246678889988654
No 94
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=35.53 E-value=1.3e+02 Score=25.28 Aligned_cols=73 Identities=16% Similarity=0.103 Sum_probs=42.4
Q ss_pred hhhHHHHHHHhc---cCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCc-----------ccEEEECcHH
Q 026284 73 PVEMNPAEENCR---MADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKK-----------ASLVVHAPVD 138 (240)
Q Consensus 73 ~~~l~~a~~~~~---~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~-----------adl~I~g~~d 138 (240)
+...+.+.+.+. .+|-+|++++... ...+...+.+.|.++|.+|-........ ..-.|..+-.
T Consensus 47 ~~~~~~i~~~i~~~~~vDgiIi~~~~~~---~~~~~~~~~~~giPvV~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~D~~ 123 (350)
T 3h75_A 47 QNTLQQARELFQGRDKPDYLMLVNEQYV---APQILRLSQGSGIKLFIVNSPLTLDQRELIGQSRQNYSDWIGSMVGDDE 123 (350)
T ss_dssp HHHHHHHHHHHHSSSCCSEEEEECCSSH---HHHHHHHHTTSCCEEEEEESCCCTTTC------------CEEEEECCHH
T ss_pred HHHHHHHHHHHhcCCCCCEEEEeCchhh---HHHHHHHHHhCCCcEEEEcCCCChHHHhhhcCCchhccceeeeecCChH
Confidence 334555566665 7999999874322 2223345667899999998775543210 0234555555
Q ss_pred HHHHHHHHHh
Q 026284 139 KVIAGVMRHL 148 (240)
Q Consensus 139 evl~~L~~~L 148 (240)
+....++++|
T Consensus 124 ~~g~~a~~~L 133 (350)
T 3h75_A 124 EAGYRMLKEL 133 (350)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 5555555554
No 95
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=34.82 E-value=94 Score=26.69 Aligned_cols=79 Identities=10% Similarity=0.053 Sum_probs=51.0
Q ss_pred EEEcCCCCChhhHHHHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCC---CCCc------------
Q 026284 64 VLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTP---KDKK------------ 128 (240)
Q Consensus 64 IV~FGE~lp~~~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~---~d~~------------ 128 (240)
|+.|...++.++ ..+.++.||+++. +|.. .+...-+..|...|.++|.-|....+ .+..
T Consensus 255 vv~~~g~~~~~~---~~~~~~~adv~v~--pS~~-E~~~~~~lEAma~G~PvI~s~~~g~~e~v~~~~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 255 IMINRTVLTDER---VDMMYNACDVIVN--CSSG-EGFGLCSAEGAVLGKPLIISAVGGADDYFSGDCVYKIKPSAWISV 328 (413)
T ss_dssp EEEECSCCCHHH---HHHHHHHCSEEEE--CCSC-CSSCHHHHHHHTTTCCEEEECCHHHHHHSCTTTSEEECCCEEEEC
T ss_pred eeeccCcCCHHH---HHHHHHhCCEEEe--CCCc-CCCCcHHHHHHHcCCCEEEcCCCChHHHHccCccccccccccccc
Confidence 788888888653 4457788998887 5542 44444456778899999987654311 1111
Q ss_pred ----cc--EEEECcHHHHHHHHHHHhc
Q 026284 129 ----AS--LVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 129 ----ad--l~I~g~~devl~~L~~~Lg 149 (240)
.- ++-.++.+++...| +.+.
T Consensus 329 ~~~~G~~gl~~~~d~~~la~~i-~l~~ 354 (413)
T 3oy2_A 329 DDRDGIGGIEGIIDVDDLVEAF-TFFK 354 (413)
T ss_dssp TTTCSSCCEEEECCHHHHHHHH-HHTT
T ss_pred ccccCcceeeCCCCHHHHHHHH-HHhc
Confidence 11 55567888888777 6554
No 96
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=34.80 E-value=91 Score=24.42 Aligned_cols=74 Identities=15% Similarity=0.019 Sum_probs=44.4
Q ss_pred hHHHHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCC--CCC---------CcccEEEECcHHHHHHH
Q 026284 75 EMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQT--PKD---------KKASLVVHAPVDKVIAG 143 (240)
Q Consensus 75 ~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t--~~d---------~~adl~I~g~~devl~~ 143 (240)
.+..-.+++++||++|++.+....--+..+ ..|...|.+++.+..... +.. ....+... +.+++...
T Consensus 67 i~~~d~~~i~~aD~vva~~~~~d~Gt~~Ei-GyA~algKPVi~l~~~~~~~~~n~M~~g~~~~~~~~~~~y-~~~el~~~ 144 (165)
T 2khz_A 67 IHEQDLNWLQQADVVVAEVTQPSLGVGYEL-GRAVALGKPILCLFRPQSGRVLSAMIRGAADGSRFQVWDY-AEGEVETM 144 (165)
T ss_dssp HHHHHHHHHHHCSEEEEECSSCCHHHHHHH-HHHHHTCSSEEEEECTTTTCCCCHHHHHTCCSSSEEEEEC-CTTTHHHH
T ss_pred HHHHHHHHHHhCCEEEEECCCCCCCHHHHH-HHHHHCCCEEEEEEcCCCCCcchhhhcccCccceeEEEec-CHHHHHHH
Confidence 345567899999999999873332222222 246778999998854431 110 12234444 66777776
Q ss_pred HHHHhcc
Q 026284 144 VMRHLNL 150 (240)
Q Consensus 144 L~~~Lg~ 150 (240)
|.+.|..
T Consensus 145 l~~~~~~ 151 (165)
T 2khz_A 145 LDRYFEA 151 (165)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 6666553
No 97
>1dx8_A Rubredoxin; electron transport, zinc-substitution; NMR {Guillardia theta} SCOP: g.41.5.1 PDB: 1h7v_A
Probab=34.36 E-value=15 Score=25.54 Aligned_cols=16 Identities=0% Similarity=-0.323 Sum_probs=13.1
Q ss_pred ccccceecCCCcccch
Q 026284 15 NLLSCTAILFEKFAHL 30 (240)
Q Consensus 15 sl~~~~C~~C~~~~~~ 30 (240)
.+.+.+|..||.+|+-
T Consensus 4 ~m~~y~C~vCGyiYd~ 19 (70)
T 1dx8_A 4 DEGKYECEACGYIYEP 19 (70)
T ss_dssp CSSCEEETTTCCEECT
T ss_pred CCceEEeCCCCEEEcC
Confidence 4567899999999884
No 98
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=34.02 E-value=1.3e+02 Score=25.60 Aligned_cols=82 Identities=15% Similarity=0.153 Sum_probs=53.0
Q ss_pred cEEEcCCCCChhhHHHHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCC--CCCcccEEEE-CcHHH
Q 026284 63 TVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTP--KDKKASLVVH-APVDK 139 (240)
Q Consensus 63 ~IV~FGE~lp~~~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~--~d~~adl~I~-g~~de 139 (240)
+++.|...++.+ ...+.+..||+++. +|.. .+...-...|...|.++|.-|..... .+....+.+. ++.++
T Consensus 311 ~~~~~~g~~~~~---~~~~~~~~adv~v~--ps~~-e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~~~g~~~~~~d~~~ 384 (439)
T 3fro_A 311 NVKVITEMLSRE---FVRELYGSVDFVII--PSYF-EPFGLVALEAMCLGAIPIASAVGGLRDIITNETGILVKAGDPGE 384 (439)
T ss_dssp TEEEECSCCCHH---HHHHHHTTCSEEEE--CBSC-CSSCHHHHHHHHTTCEEEEESSTHHHHHCCTTTCEEECTTCHHH
T ss_pred CEEEEcCCCCHH---HHHHHHHHCCEEEe--CCCC-CCccHHHHHHHHCCCCeEEcCCCCcceeEEcCceEEeCCCCHHH
Confidence 677777767764 44567789998876 3332 44444445677889999888765322 2122455555 68888
Q ss_pred HHHHHHHHhcc
Q 026284 140 VIAGVMRHLNL 150 (240)
Q Consensus 140 vl~~L~~~Lg~ 150 (240)
+...|.+.+..
T Consensus 385 la~~i~~ll~~ 395 (439)
T 3fro_A 385 LANAILKALEL 395 (439)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 88888777763
No 99
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=33.50 E-value=12 Score=32.48 Aligned_cols=54 Identities=9% Similarity=0.044 Sum_probs=40.4
Q ss_pred HhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEEC
Q 026284 82 NCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVHA 135 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~g 135 (240)
.+.+-|++|++-.|....-.......++++|+++|-| |....+..+.+|+.|.-
T Consensus 137 ~l~~~DvvI~IS~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~S~La~~AD~~I~~ 191 (306)
T 1nri_A 137 HFSKNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEMAEIADIAIET 191 (306)
T ss_dssp TCCTTSEEEEECTTSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHHSSEEEEC
T ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCChHHHhCCEEEEc
Confidence 4677899999999999777777778888999988777 33344555566776653
No 100
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=33.28 E-value=48 Score=18.95 Aligned_cols=42 Identities=5% Similarity=-0.176 Sum_probs=24.4
Q ss_pred ecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCC
Q 026284 11 YQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCG 57 (240)
Q Consensus 11 lHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~Cg 57 (240)
.|- .-....|..|++.|.....+..... +........|+ .||
T Consensus 4 ~h~-~~k~~~C~~C~k~f~~~~~l~~H~~--~H~~~~~~~C~--~cg 45 (45)
T 2epq_A 4 GSS-GEKPYSCPVCGLRFKRKDRMSYHVR--SHDGSVGKSGP--SSG 45 (45)
T ss_dssp CCS-SCCSSEETTTTEECSCHHHHHHHHH--HHSCCCCCCCC--CCC
T ss_pred CcC-CCCCCcCCCCCcccCCHHHHHHHHH--HccCCCCCCCc--CCC
Confidence 455 4556789999998876554432211 11123456788 776
No 101
>1g8k_A Arsenite oxidase; molybdopterin, [3Fe-4S] cluster, [2Fe-2S] rieske, oxidoreductase; HET: MGD; 1.64A {Alcaligenes faecalis} SCOP: b.52.2.2 c.81.1.1 PDB: 1g8j_A*
Probab=31.76 E-value=31 Score=34.10 Aligned_cols=49 Identities=18% Similarity=0.264 Sum_probs=30.5
Q ss_pred HhccCCEEEEEcCCCCcc-ccc---cchhh-------hh--------cCCCEEEEEcCCCCCCCCccc
Q 026284 82 NCRMADVVLCLGTSLQIT-PAC---NLPLK-------SL--------RGGGKIVIVNLQQTPKDKKAS 130 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~-Pa~---~lp~~-------a~--------~~g~~lViIN~q~t~~d~~ad 130 (240)
.+.+||++|++|+-.... |.. .+... ++ ++|+++|.|++..|.....+|
T Consensus 221 D~~~ad~il~~G~Np~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~klivIDPr~t~ta~~Ad 288 (825)
T 1g8k_A 221 DAQLADVIWSIGNNPYESQTNYFLNHWLPNLQGATTSKKKERFPNENFPQARIIFVDPRETPSVAIAR 288 (825)
T ss_dssp HHHHCSEEEEESCCHHHHSHHHHHHTHHHHHHTTTHHHHHHHCTTCCCCCCEEEEECSSCCHHHHHHH
T ss_pred HHHhCCEEEEeCCChHHhCcchHhhhHHHhhhhhHHHHhhhhccccccCCCEEEEEeCCCCchhhhhh
Confidence 467999999999965422 210 11100 11 258999999999887444444
No 102
>2v3b_B Rubredoxin 2, rubredoxin; alkane degradation, iron-sulfur protein, oxidoreductase, ELE transfer, electron transport, FAD, NAD, iron; HET: FAD; 2.45A {Pseudomonas aeruginosa}
Probab=31.48 E-value=16 Score=24.03 Aligned_cols=14 Identities=0% Similarity=-0.145 Sum_probs=11.5
Q ss_pred ccceecCCCcccch
Q 026284 17 LSCTAILFEKFAHL 30 (240)
Q Consensus 17 ~~~~C~~C~~~~~~ 30 (240)
.+.+|..||..|+-
T Consensus 2 ~~y~C~~CGyvYd~ 15 (55)
T 2v3b_B 2 RKWQCVVCGFIYDE 15 (55)
T ss_dssp CEEEETTTCCEEET
T ss_pred CcEEeCCCCeEECC
Confidence 45789999999874
No 103
>2kn9_A Rubredoxin; metalloprotein, ssgcid, structural genomics, seattle structural genomics center for infectious electron transport, iron; NMR {Mycobacterium tuberculosis}
Probab=31.18 E-value=20 Score=25.65 Aligned_cols=15 Identities=7% Similarity=-0.345 Sum_probs=12.5
Q ss_pred cccceecCCCcccch
Q 026284 16 LLSCTAILFEKFAHL 30 (240)
Q Consensus 16 l~~~~C~~C~~~~~~ 30 (240)
..+.+|..||.+|+-
T Consensus 25 m~~y~C~vCGyvYD~ 39 (81)
T 2kn9_A 25 YKLFRCIQCGFEYDE 39 (81)
T ss_dssp CCEEEETTTCCEEET
T ss_pred cceEEeCCCCEEEcC
Confidence 457899999999884
No 104
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=30.91 E-value=60 Score=24.69 Aligned_cols=82 Identities=16% Similarity=0.178 Sum_probs=49.2
Q ss_pred ccEEEcCCCCChhhHHHHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCC---CCCcccEEEECcHH
Q 026284 62 DTVLDWEDALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTP---KDKKASLVVHAPVD 138 (240)
Q Consensus 62 P~IV~FGE~lp~~~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~---~d~~adl~I~g~~d 138 (240)
++|.+.| .++.+ +..+.++.||++|.. |. ..+...-+..+...|.++|.-+..... .+....+.+.++.+
T Consensus 78 ~~v~~~g-~~~~~---e~~~~~~~adi~v~p--s~-~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~d~~ 150 (177)
T 2f9f_A 78 DNVKFLG-SVSEE---ELIDLYSRCKGLLCT--AK-DEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNADVN 150 (177)
T ss_dssp TTEEEEE-SCCHH---HHHHHHHHCSEEEEC--CS-SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECSCHH
T ss_pred CcEEEeC-CCCHH---HHHHHHHhCCEEEeC--CC-cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCCCccEEeCCCHH
Confidence 4777665 44543 355677889988862 22 233333345677889999887754321 12223344467888
Q ss_pred HHHHHHHHHhcc
Q 026284 139 KVIAGVMRHLNL 150 (240)
Q Consensus 139 evl~~L~~~Lg~ 150 (240)
++...|.+.+.-
T Consensus 151 ~l~~~i~~l~~~ 162 (177)
T 2f9f_A 151 EIIDAMKKVSKN 162 (177)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhC
Confidence 887777776643
No 105
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=30.12 E-value=23 Score=31.26 Aligned_cols=54 Identities=15% Similarity=0.153 Sum_probs=40.2
Q ss_pred hccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEECc
Q 026284 83 CRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVHAP 136 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~g~ 136 (240)
+.+-|++|++--|....-.......++++|+++|.| |....+..+.+|+.|.-.
T Consensus 100 l~~~dlvI~iS~SG~t~e~~~a~~~ak~~Ga~vi~IT~~~~S~La~~ad~~l~~~ 154 (355)
T 2a3n_A 100 LNKDSVVITLSKSGDTKESVAIAEWCKAQGIRVVAITKNADSPLAQAATWHIPMR 154 (355)
T ss_dssp CCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTCSEEEECC
T ss_pred CCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCChhhHhCCEEEEeC
Confidence 356799999999998777777777788899877655 555566666677766543
No 106
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=29.97 E-value=2.2e+02 Score=22.90 Aligned_cols=37 Identities=8% Similarity=-0.063 Sum_probs=25.8
Q ss_pred ccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCC
Q 026284 84 RMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTP 124 (240)
Q Consensus 84 ~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~ 124 (240)
...|-+|++++... ......+.+.|.|+|.+|.....
T Consensus 68 ~~vdgiIi~~~~~~----~~~~~~l~~~~iPvV~~~~~~~~ 104 (292)
T 3k4h_A 68 RQIGGIILLYSREN----DRIIQYLHEQNFPFVLIGKPYDR 104 (292)
T ss_dssp TCCCEEEESCCBTT----CHHHHHHHHTTCCEEEESCCSSC
T ss_pred CCCCEEEEeCCCCC----hHHHHHHHHCCCCEEEECCCCCC
Confidence 56899999876543 12334456789999999877544
No 107
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=29.81 E-value=36 Score=29.93 Aligned_cols=53 Identities=13% Similarity=0.100 Sum_probs=39.0
Q ss_pred hccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEEC
Q 026284 83 CRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVHA 135 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~g 135 (240)
..+-|++|++--|....-.......++++|++++-| |....+..+.+|+.|.-
T Consensus 88 ~~~~dl~i~iS~SG~T~e~~~a~~~ak~~g~~~i~IT~~~~S~la~~ad~~l~~ 141 (334)
T 3hba_A 88 KLAGGLVIVISQSGRSPDILAQARMAKNAGAFCVALVNDETAPIKDIVDVVIPL 141 (334)
T ss_dssp CCTTCEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSGGGGTSSEEEEC
T ss_pred CCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEeCCCCChHHHhcCEeeee
Confidence 346689999999988777777777788888877655 66666666677776653
No 108
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=28.90 E-value=2.3e+02 Score=22.84 Aligned_cols=36 Identities=19% Similarity=0.052 Sum_probs=25.7
Q ss_pred ccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCC
Q 026284 84 RMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQT 123 (240)
Q Consensus 84 ~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t 123 (240)
...|-+|++++.. .......+.+.|.++|.++....
T Consensus 63 ~~vdgiIi~~~~~----~~~~~~~~~~~~iPvV~~~~~~~ 98 (291)
T 3egc_A 63 RRVDGLILAPSEG----EHDYLRTELPKTFPIVAVNRELR 98 (291)
T ss_dssp TTCSEEEECCCSS----CCHHHHHSSCTTSCEEEESSCCC
T ss_pred CCCCEEEEeCCCC----ChHHHHHhhccCCCEEEEecccC
Confidence 5689999988765 22333445577999999987765
No 109
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=28.57 E-value=1.9e+02 Score=23.20 Aligned_cols=40 Identities=15% Similarity=0.173 Sum_probs=26.4
Q ss_pred ccCCEEEEEcCCCCcc-ccccchhhhhcCCCEEEEEcCCCC
Q 026284 84 RMADVVLCLGTSLQIT-PACNLPLKSLRGGGKIVIVNLQQT 123 (240)
Q Consensus 84 ~~aDLvLVIGTSL~V~-Pa~~lp~~a~~~g~~lViIN~q~t 123 (240)
..+|-+|+.++..... +.......+.+.|.|+|.+|....
T Consensus 70 ~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~ 110 (298)
T 3tb6_A 70 QHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINASYA 110 (298)
T ss_dssp TCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESSCCT
T ss_pred CCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEecCcC
Confidence 5699999988764321 222333445678999999987654
No 110
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=28.54 E-value=80 Score=31.35 Aligned_cols=44 Identities=18% Similarity=0.271 Sum_probs=27.7
Q ss_pred cCCCCCCCCCCCCCcccccEEEc---CCCCChhhHHHHHHHhccCCEEEEEcC
Q 026284 45 KKTPRRCSDVKCGSRLKDTVLDW---EDALPPVEMNPAEENCRMADVVLCLGT 94 (240)
Q Consensus 45 ~~~~p~C~~~~CgG~LRP~IV~F---GE~lp~~~l~~a~~~~~~aDLvLVIGT 94 (240)
|-..--|+ .||-. +-++ |+.+..+.++.|.+.+++-.++-+=|-
T Consensus 175 hAqp~aC~--~CGP~----l~l~~~~~~~~~~~~i~~a~~~l~~G~iva~kg~ 221 (772)
T 4g9i_A 175 HAEPTACP--VCGPS----YRLYTSDGQEIYGDPLRKAAELIDKGYIVAIKGI 221 (772)
T ss_dssp TCTTCCCT--TTSCC----EEEESSSCBCCTTHHHHHHHHHHTTSCCEEECCS
T ss_pred cCCCCCCc--cCCce----EEEEcCCCCeechHHHHHHHHHHHcCCEEEEecC
Confidence 44556788 89953 2233 444556678888888877666555443
No 111
>2im5_A Nicotinate phosphoribosyltransferase; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.20A {Porphyromonas gingivalis}
Probab=27.11 E-value=62 Score=29.47 Aligned_cols=77 Identities=17% Similarity=0.184 Sum_probs=49.2
Q ss_pred EEcCCCCChhhHHHHHHHhccCC-EEEEEcCCCCc-----cccccchhhhhcCCCEEEEEc------CCCCCC-CCcccE
Q 026284 65 LDWEDALPPVEMNPAEENCRMAD-VVLCLGTSLQI-----TPACNLPLKSLRGGGKIVIVN------LQQTPK-DKKASL 131 (240)
Q Consensus 65 V~FGE~lp~~~l~~a~~~~~~aD-LvLVIGTSL~V-----~Pa~~lp~~a~~~g~~lViIN------~q~t~~-d~~adl 131 (240)
+.|++.|+++.+....++++.+. ...=|||.|.- .|+.+++. |++.+| -+|.-+ .....
T Consensus 302 Ii~SdgLd~~~i~~l~~~~~g~~~d~FGvGT~L~~~~~~~~~~l~~V~-------Klv~~~~~~~~~g~p~~KlS~~~~- 373 (394)
T 2im5_A 302 IIFSDSLTPQRAIEIQKLCAGRIKASFGIGTNLTNDVGGGVEPLNIVM-------KLWKCKMTAKDDWHYCVKLSDVDG- 373 (394)
T ss_dssp EEECSSCCHHHHHHHHHHHTTTSEEEEEECHHHHSCCSTTCCCCCEEE-------EEEEEESSTTSCCEECCBCCSSTT-
T ss_pred EEEcCCCCHHHHHHHHHHhcCCCceEEEeCcccccCCCCCCCccceEe-------eeeeecccccCCCCceEEecCCCC-
Confidence 88999999988877777665554 77889999864 23333322 788898 333322 11111
Q ss_pred EEECcHHHHHHHHHHHhcc
Q 026284 132 VVHAPVDKVIAGVMRHLNL 150 (240)
Q Consensus 132 ~I~g~~devl~~L~~~Lg~ 150 (240)
...++ .+-+.++.+.+|+
T Consensus 374 K~t~p-~k~v~r~~~~~~~ 391 (394)
T 2im5_A 374 KHTGE-PEEILLAMNTLGI 391 (394)
T ss_dssp CCBSC-HHHHHHHHHHHTC
T ss_pred CccCC-HHHHHHHHHhcCC
Confidence 34566 6666677777766
No 112
>1yk4_A Rubredoxin, RD; electron transport; 0.69A {Pyrococcus abyssi} PDB: 2pya_A 1yk5_A 1bq8_A 1bq9_A* 3kyu_A 3kyv_A 3kyw_A 3kyx_A 3kyy_A 3ryg_A 3rz6_A 3rzt_A 3ss2_A 1brf_A 1caa_A 1cad_A 1vcx_A 1zrp_A 1iu5_A 1iu6_A ...
Probab=26.94 E-value=26 Score=22.73 Aligned_cols=13 Identities=0% Similarity=-0.151 Sum_probs=10.8
Q ss_pred cceecCCCcccch
Q 026284 18 SCTAILFEKFAHL 30 (240)
Q Consensus 18 ~~~C~~C~~~~~~ 30 (240)
+.+|..||..|+-
T Consensus 2 ~~~C~~CGyvYd~ 14 (52)
T 1yk4_A 2 KLSCKICGYIYDE 14 (52)
T ss_dssp EEEESSSSCEEET
T ss_pred cEEeCCCCeEECC
Confidence 4689999999874
No 113
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=26.84 E-value=24 Score=28.43 Aligned_cols=43 Identities=14% Similarity=0.003 Sum_probs=33.9
Q ss_pred HhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcC-CCCC
Q 026284 82 NCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNL-QQTP 124 (240)
Q Consensus 82 ~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~-q~t~ 124 (240)
.++..|.+|++-+|..=.-+-.+...++++|.++|-|-. +.+.
T Consensus 74 ~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs~~~~~ 117 (170)
T 3jx9_A 74 TLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITLGDVTE 117 (170)
T ss_dssp CCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEESSCCCT
T ss_pred CCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeCcchhc
Confidence 677899999999998854477788888999998887744 5443
No 114
>3dma_A Exopolyphosphatase-related protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.25A {Bacteroides fragilis}
Probab=26.06 E-value=3.3e+02 Score=23.78 Aligned_cols=75 Identities=13% Similarity=0.194 Sum_probs=47.1
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEE----CcHHHHHHHHHHHhc--cc
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVH----APVDKVIAGVMRHLN--LW 151 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~----g~~devl~~L~~~Lg--~~ 151 (240)
.+.+...+.|++|++-|+-.-. ...+.......+.++++|.--+..-+ .+++.+. |.+.+++.++++.+| ++
T Consensus 84 ~~~~~~~~~~lvi~VD~~~~~r-~~~~~~~l~~~~~~~ivIDHH~~~~~-~~~~~~i~~~~~ST~eiv~~l~~~~~~~~~ 161 (343)
T 3dma_A 84 FADKLIMEADVICCLDFNALKR-IDEMSDIVAASPGRKIMIDHHLYPED-FCRITISHPEISSTSELVFRLICRMGYFSD 161 (343)
T ss_dssp HHHHHHHHCSEEEEESCSSGGG-GTTCHHHHHHCCSEEEEEECCSSCCS-CSSEEEECTTSSCHHHHHHHHHHHTTCGGG
T ss_pred HHhhcccCCCEEEEEeCCChHH-hchhHHHHHhCCCCEEEEcCCCCCCC-CCceEEEecCcCcHHHHHHHHHHHcCCCCC
Confidence 3445567889999999974211 11122122334567888877666533 3455443 458899999999998 66
Q ss_pred CCC
Q 026284 152 IPP 154 (240)
Q Consensus 152 iP~ 154 (240)
|++
T Consensus 162 i~~ 164 (343)
T 3dma_A 162 ISK 164 (343)
T ss_dssp CCH
T ss_pred CCH
Confidence 654
No 115
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=25.88 E-value=37 Score=30.20 Aligned_cols=53 Identities=13% Similarity=0.063 Sum_probs=40.3
Q ss_pred hccCCEEEEEcCCCCccccccchhhhhcC-CCEEEE-EcCCCCCCCCcccEEEEC
Q 026284 83 CRMADVVLCLGTSLQITPACNLPLKSLRG-GGKIVI-VNLQQTPKDKKASLVVHA 135 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~-g~~lVi-IN~q~t~~d~~adl~I~g 135 (240)
+.+-|++|++.-|....-.-.....++++ |+++|. .|....+..+.+|+.|.-
T Consensus 95 ~~~~dlvI~iS~SG~T~e~l~a~~~ak~~~Ga~vIaIT~~~~S~La~~ad~~l~~ 149 (373)
T 2aml_A 95 SSHLDLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTSEIAEFADITLDI 149 (373)
T ss_dssp CTTCCEEEEECSSSCBHHHHHHHHHHHHHCCCCEEEEESCTTSGGGGGCSEEEEC
T ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHHHhCCCcEEEEECCCCChHHHhcCcceec
Confidence 56679999999999877777777778888 876654 466667777777777654
No 116
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=25.70 E-value=20 Score=26.00 Aligned_cols=15 Identities=13% Similarity=0.027 Sum_probs=12.6
Q ss_pred cccceecCCCcccch
Q 026284 16 LLSCTAILFEKFAHL 30 (240)
Q Consensus 16 l~~~~C~~C~~~~~~ 30 (240)
+.+.+|..||+.|+-
T Consensus 33 m~~y~C~vCGyvYD~ 47 (87)
T 1s24_A 33 YLKWICITCGHIYDE 47 (87)
T ss_dssp CCEEEETTTTEEEET
T ss_pred CceEECCCCCeEecC
Confidence 567899999999874
No 117
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=25.67 E-value=30 Score=30.94 Aligned_cols=52 Identities=8% Similarity=0.017 Sum_probs=40.6
Q ss_pred hccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEE
Q 026284 83 CRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVH 134 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~ 134 (240)
+.+-|++|++--|+...-.......++++|+++|-| |....+..+.+|+.|.
T Consensus 95 ~~~~dlvI~iS~SGeT~e~l~a~~~ak~~Ga~~IaIT~~~~S~La~~aD~~l~ 147 (366)
T 3knz_A 95 RSGKALVVGISQGGGSLSTLAAMERARNVGHITASMAGVAPATIDRAADYILT 147 (366)
T ss_dssp HSCSEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSSSCGGGGGCSEECC
T ss_pred CCCCCEEEEEcCCCCCHHHHHHHHHHHHcCCCEEEEECCCCChhhhhcCEEEe
Confidence 477899999999999777777777888889987655 6666677667776654
No 118
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=24.67 E-value=31 Score=30.49 Aligned_cols=50 Identities=12% Similarity=0.068 Sum_probs=37.4
Q ss_pred cCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEE
Q 026284 85 MADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVH 134 (240)
Q Consensus 85 ~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~ 134 (240)
+-|++|++--|....-.-.....++++|+++|-| |....+..+.+|+.|.
T Consensus 82 ~~dlvI~iS~SG~T~e~l~a~~~ak~~ga~~iaIT~~~~S~La~~aD~~l~ 132 (352)
T 3g68_A 82 ENTLVVGVSQGGSSYSTYNAMKLAEDKGCKIASMAGCKNALIDEISDYILT 132 (352)
T ss_dssp TTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTCGGGGGCSEECC
T ss_pred CCcEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCChHHHhCCEEEE
Confidence 6789999999998777777777788889877655 6666666666666554
No 119
>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1
Probab=23.93 E-value=54 Score=20.75 Aligned_cols=15 Identities=0% Similarity=-0.250 Sum_probs=12.1
Q ss_pred cccceecCCCcccch
Q 026284 16 LLSCTAILFEKFAHL 30 (240)
Q Consensus 16 l~~~~C~~C~~~~~~ 30 (240)
+.+.+|..||..|+-
T Consensus 2 m~~y~C~vCGyvyd~ 16 (46)
T 6rxn_A 2 MQKYVCNVCGYEYDP 16 (46)
T ss_dssp CCCEEETTTCCEECG
T ss_pred CCEEECCCCCeEEeC
Confidence 456789999999884
No 120
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=23.75 E-value=2.9e+02 Score=22.46 Aligned_cols=35 Identities=11% Similarity=-0.120 Sum_probs=24.8
Q ss_pred ccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCC
Q 026284 84 RMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQ 122 (240)
Q Consensus 84 ~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~ 122 (240)
...|-+|++++... ........+.|.|+|.++...
T Consensus 82 ~~vdgiIi~~~~~~----~~~~~~l~~~~iPvV~i~~~~ 116 (305)
T 3huu_A 82 KSVDGFILLYSLKD----DPIEHLLNEFKVPYLIVGKSL 116 (305)
T ss_dssp TCCSEEEESSCBTT----CHHHHHHHHTTCCEEEESCCC
T ss_pred CCCCEEEEeCCcCC----cHHHHHHHHcCCCEEEECCCC
Confidence 56899999887643 123334557899999998775
No 121
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=23.60 E-value=34 Score=29.60 Aligned_cols=69 Identities=13% Similarity=-0.059 Sum_probs=42.0
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCC----CcccE---EEECcHHHHHHHHHHH
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKD----KKASL---VVHAPVDKVIAGVMRH 147 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d----~~adl---~I~g~~devl~~L~~~ 147 (240)
.++..+..||++++-|||+.=--.-++...++ ++..+|++=+...-.. ...+. ..--+.+.++..|.+-
T Consensus 179 ~~e~ll~~aD~viiTGsTlvN~Ti~~lL~~~~-~a~~vvl~GPS~p~~P~lf~~Gv~~l~G~~V~D~~~~~~~i~~G 254 (270)
T 2h1q_A 179 ASEFILPECDYVYITCASVVDKTLPRLLELSR-NARRITLVGPGTPLAPVLFEHGLQELSGFMVKDNARAFRIVAGA 254 (270)
T ss_dssp GHHHHGGGCSEEEEETHHHHHTCHHHHHHHTT-TSSEEEEESTTCCCCGGGGGTTCSEEEEEEESCHHHHHHHHTTS
T ss_pred HHHHHhhcCCEEEEEeeeeecCCHHHHHHhCc-cCCeEEEEecChhhhHHHHhcCcCEEEEeEecCHHHHHHHHHcC
Confidence 34557899999999999987666666655553 4557777766632221 11121 1234677776655443
No 122
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=23.43 E-value=1e+02 Score=30.57 Aligned_cols=39 Identities=18% Similarity=0.220 Sum_probs=22.7
Q ss_pred CCEEEEEcCCCCCC-----CCcccEEEECcHHHHHHHHHHHhcc
Q 026284 112 GGKIVIVNLQQTPK-----DKKASLVVHAPVDKVIAGVMRHLNL 150 (240)
Q Consensus 112 g~~lViIN~q~t~~-----d~~adl~I~g~~devl~~L~~~Lg~ 150 (240)
-++++++...+... .....+-|+=....+...|++.+|.
T Consensus 280 pgPitlL~~~~~~lp~~v~~~~~tvGvRlP~~pl~~~Ll~~~g~ 323 (761)
T 3vth_A 280 RRPIVLLKKKGEKLAKGIADDLDTLGVMLPYAPIHYLLMEEIDF 323 (761)
T ss_dssp TCCEEEEEBCSSCCCTTSSTTCSEEEEECCCSHHHHHHHHHCSS
T ss_pred CCCEEEEECCCCCCCHhHcCCCCeEEEEecCCHHHHHHHHHcCC
Confidence 44666665433111 1233566777777777788888764
No 123
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=23.01 E-value=28 Score=30.86 Aligned_cols=53 Identities=13% Similarity=0.074 Sum_probs=39.1
Q ss_pred hccCCEEEEEcCCCCccccccchhhhhcCC-CEEEEE-cCCCCCCCCcccEEEEC
Q 026284 83 CRMADVVLCLGTSLQITPACNLPLKSLRGG-GKIVIV-NLQQTPKDKKASLVVHA 135 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g-~~lViI-N~q~t~~d~~adl~I~g 135 (240)
+.+-|++|++--|....-.......++++| +++|-| |....+..+.+|+.|.-
T Consensus 97 ~~~~dlvI~iS~SG~T~e~l~a~~~ak~~G~a~viaIT~~~~S~La~~ad~~l~~ 151 (368)
T 1moq_A 97 VRRNSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALMT 151 (368)
T ss_dssp CCTTEEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEEEC
T ss_pred CCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCCeEEEEECCCCChHHHhCCEEEEc
Confidence 456789999999998777777777888889 777655 66666665666666553
No 124
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=22.80 E-value=2.5e+02 Score=22.71 Aligned_cols=36 Identities=14% Similarity=0.034 Sum_probs=24.2
Q ss_pred ccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCC
Q 026284 84 RMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQ 121 (240)
Q Consensus 84 ~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q 121 (240)
...|-+|+.+++... .......+.+.|.|+|.+|-.
T Consensus 56 ~~vdgiii~~~~~~~--~~~~~~~~~~~~iPvV~~~~~ 91 (306)
T 8abp_A 56 SGAKGFVICTPDPKL--GSAIVAKARGYDMKVIAVDDQ 91 (306)
T ss_dssp TTCCEEEEECSCGGG--HHHHHHHHHHTTCEEEEESSC
T ss_pred cCCCEEEEeCCCchh--hHHHHHHHHHCCCcEEEeCCC
Confidence 468999998875431 112233456789999999954
No 125
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=22.59 E-value=27 Score=31.15 Aligned_cols=53 Identities=17% Similarity=0.041 Sum_probs=38.6
Q ss_pred hccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEEC
Q 026284 83 CRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVHA 135 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~g 135 (240)
+.+-|++|++--|....-.......++++|+++|.| |....+..+.+|+.|.-
T Consensus 105 ~~~~dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~~ 158 (375)
T 2zj3_A 105 VFRDDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGVHI 158 (375)
T ss_dssp CCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHSSEEEEC
T ss_pred CCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEECCCCChHHHhCCEeeee
Confidence 345689999999998777777777888899877655 65555655566666543
No 126
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=22.27 E-value=31 Score=30.44 Aligned_cols=53 Identities=13% Similarity=0.088 Sum_probs=39.5
Q ss_pred hccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEEC
Q 026284 83 CRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVHA 135 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~g 135 (240)
..+-|++|++--|+...-.......++++|+++|-| |....+..+.+|+.|.-
T Consensus 89 ~~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~~ 142 (344)
T 3fj1_A 89 RLDRALCLAVSQSGKSPDIVAMTRNAGRDGALCVALTNDAASPLAGVSAHTIDI 142 (344)
T ss_dssp CCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTSSEEEEC
T ss_pred CCCCcEEEEEcCCCCCHHHHHHHHHHHHCCCcEEEEECCCCChHHHhcCEeeec
Confidence 456689999999998777777777788889987766 66666666666766653
No 127
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=22.24 E-value=59 Score=24.33 Aligned_cols=27 Identities=22% Similarity=0.351 Sum_probs=17.6
Q ss_pred ccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCC
Q 026284 17 LSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGS 58 (240)
Q Consensus 17 ~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG 58 (240)
.-..|.+||..|. .. .....+|| .|++
T Consensus 66 ~p~~C~~CG~~F~-----~~--------~~kPsrCP--~CkS 92 (105)
T 2gmg_A 66 KPAQCRKCGFVFK-----AE--------INIPSRCP--KCKS 92 (105)
T ss_dssp CCCBBTTTCCBCC-----CC--------SSCCSSCS--SSCC
T ss_pred ECcChhhCcCeec-----cc--------CCCCCCCc--CCCC
Confidence 4478999998861 01 12456899 7874
No 128
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=22.01 E-value=3.1e+02 Score=22.04 Aligned_cols=36 Identities=11% Similarity=-0.171 Sum_probs=25.0
Q ss_pred ccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCC
Q 026284 84 RMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQT 123 (240)
Q Consensus 84 ~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t 123 (240)
..+|-+|++++... ......+.+.|.|+|.+|....
T Consensus 65 ~~vdgiIi~~~~~~----~~~~~~l~~~~iPvV~i~~~~~ 100 (288)
T 3gv0_A 65 GSADGVIISKIEPN----DPRVRFMTERNMPFVTHGRSDM 100 (288)
T ss_dssp TCCSEEEEESCCTT----CHHHHHHHHTTCCEEEESCCCS
T ss_pred CCccEEEEecCCCC----cHHHHHHhhCCCCEEEECCcCC
Confidence 67999999887543 1223345568999999987643
No 129
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=21.89 E-value=25 Score=30.92 Aligned_cols=51 Identities=6% Similarity=-0.051 Sum_probs=35.4
Q ss_pred ccC-CEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEE
Q 026284 84 RMA-DVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVH 134 (240)
Q Consensus 84 ~~a-DLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~ 134 (240)
.+- |++|++--|....-.......++++|++++.| |....+..+.+|+.|.
T Consensus 98 ~~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~La~~ad~~l~ 150 (342)
T 1j5x_A 98 LEERGLAFLFSRTGNTTEVLLANDVLKKRNHRTIGITIEEESRLAKESDLPLV 150 (342)
T ss_dssp CCSSEEEEEECSSSCCHHHHHHHHHHHHTTEEEEEEESCTTSHHHHHSSEEEE
T ss_pred CCCCeEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHHHhcCEEEE
Confidence 344 89999999988777777777788888777655 5555555455565554
No 130
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=21.48 E-value=3.3e+02 Score=22.15 Aligned_cols=62 Identities=16% Similarity=0.112 Sum_probs=37.4
Q ss_pred ccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHhc
Q 026284 84 RMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHLN 149 (240)
Q Consensus 84 ~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~Lg 149 (240)
..+|-+|+.+++... .......+.+.|.|+|.+|...... ..+..|..+-.+....++++|.
T Consensus 57 ~~vdgiIi~~~~~~~--~~~~~~~~~~~~iPvV~~~~~~~~~--~~~~~V~~D~~~~g~~a~~~L~ 118 (313)
T 3m9w_A 57 RGVDVLVIIPYNGQV--LSNVVKEAKQEGIKVLAYDRMINDA--DIDFYISFDNEKVGELQAKALV 118 (313)
T ss_dssp TTCSEEEEECSSTTS--CHHHHHHHHTTTCEEEEESSCCTTS--CCSEEEEECHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCChhh--hHHHHHHHHHCCCeEEEECCcCCCC--CceEEEecCHHHHHHHHHHHHH
Confidence 569999999886432 1233445567899999998765432 2223455555555555555543
No 131
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=20.88 E-value=2e+02 Score=24.64 Aligned_cols=69 Identities=14% Similarity=0.210 Sum_probs=41.3
Q ss_pred HHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCC---CCCcccEEEE-CcHHHHHHHHHHHhc
Q 026284 78 PAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTP---KDKKASLVVH-APVDKVIAGVMRHLN 149 (240)
Q Consensus 78 ~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~---~d~~adl~I~-g~~devl~~L~~~Lg 149 (240)
...+.+..||++|. +|.. .+...-+..|...|.++|..+..... .+....+.+. ++.+++...|.+.+.
T Consensus 318 ~~~~~~~~adv~v~--ps~~-e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~ 390 (438)
T 3c48_A 318 ELVAVYRAADIVAV--PSFN-ESFGLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLD 390 (438)
T ss_dssp HHHHHHHHCSEEEE--CCSC-CSSCHHHHHHHHTTCCEEEESCTTHHHHSCBTTTEEEESSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEE--Cccc-cCCchHHHHHHHcCCCEEecCCCChhHHhhCCCcEEECCCCCHHHHHHHHHHHHc
Confidence 44567788998765 4432 34444445677889999888764322 1223345554 467777666665543
No 132
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=20.88 E-value=30 Score=30.74 Aligned_cols=54 Identities=15% Similarity=0.057 Sum_probs=39.1
Q ss_pred hccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEECc
Q 026284 83 CRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVHAP 136 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~g~ 136 (240)
+.+-|++|++--|....-.......++++|+++|-| |....+..+.+|+.|.-.
T Consensus 95 ~~~~dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~~~ 149 (367)
T 2poc_A 95 VFRDDTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVHIN 149 (367)
T ss_dssp CCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTSHHHHHSSEEEECC
T ss_pred CCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEEcC
Confidence 456689999999998777777777888899877655 555555555666666543
No 133
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=20.87 E-value=60 Score=25.13 Aligned_cols=50 Identities=20% Similarity=0.167 Sum_probs=36.8
Q ss_pred CCChhhHHHHHHHhccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEc
Q 026284 70 ALPPVEMNPAEENCRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVN 119 (240)
Q Consensus 70 ~lp~~~l~~a~~~~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN 119 (240)
.++++.++++.+.+.+|+-++++|....-..+..+.....+-|.++..++
T Consensus 23 ~l~~~~l~~~~~~i~~a~~I~i~G~G~S~~~a~~~~~~l~~~g~~~~~~~ 72 (187)
T 3sho_A 23 QTQPEAIEAAVEAICRADHVIVVGMGFSAAVAVFLGHGLNSLGIRTTVLT 72 (187)
T ss_dssp TCCHHHHHHHHHHHHHCSEEEEECCGGGHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hCCHHHHHHHHHHHHhCCEEEEEecCchHHHHHHHHHHHHhcCCCEEEec
Confidence 45677889999999999999999987664444444444456677777777
No 134
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=20.74 E-value=30 Score=30.19 Aligned_cols=52 Identities=12% Similarity=0.081 Sum_probs=38.7
Q ss_pred hccCCEEEEEcCCCCccccccchhhhhcCCCEEEEE-cCCCCCCCCcccEEEE
Q 026284 83 CRMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIV-NLQQTPKDKKASLVVH 134 (240)
Q Consensus 83 ~~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViI-N~q~t~~d~~adl~I~ 134 (240)
+.+-|++|++--|....-.-.....++++|++++-| |....+..+.+|+.|.
T Consensus 72 l~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~~ad~~l~ 124 (329)
T 3eua_A 72 LGEKSLVILCSHSGNTPETVKAAAFARGKGALTIAMTFKPESPLAQEAQYVAQ 124 (329)
T ss_dssp CSTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHHSSEEEE
T ss_pred CCCCcEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEE
Confidence 456789999999998777777777788889977655 6666666666676664
No 135
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=20.73 E-value=2.6e+02 Score=22.17 Aligned_cols=56 Identities=14% Similarity=-0.034 Sum_probs=30.6
Q ss_pred ccCCEEEEEcCCCCccccccchhhhhcCCCEEEEEcCCCCCCCCcccEEEECcHHHHHHHHHHHh
Q 026284 84 RMADVVLCLGTSLQITPACNLPLKSLRGGGKIVIVNLQQTPKDKKASLVVHAPVDKVIAGVMRHL 148 (240)
Q Consensus 84 ~~aDLvLVIGTSL~V~Pa~~lp~~a~~~g~~lViIN~q~t~~d~~adl~I~g~~devl~~L~~~L 148 (240)
...|-+|+.+++.. . .....+.+.|.|+|.+|..... . -.+..+-.+....++++|
T Consensus 54 ~~vdgiI~~~~~~~-~---~~~~~~~~~~iPvV~~~~~~~~----~-~~V~~d~~~~~~~a~~~L 109 (276)
T 2h0a_A 54 YLTDGLILASYDLT-E---RFEEGRLPTERPVVLVDAQNPR----Y-DSVYLDNRLGGRLAGAYL 109 (276)
T ss_dssp CCCSEEEEESCCCC----------CCSCSSCEEEESSCCTT----S-EEEEECSHHHHHHHHHHH
T ss_pred CCCCEEEEecCCCC-H---HHHHHHhhcCCCEEEEeccCCC----C-CEEEEccHHHHHHHHHHH
Confidence 56899999887654 1 2222344578899999875431 1 233444444444455554
No 136
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=20.07 E-value=82 Score=21.82 Aligned_cols=49 Identities=8% Similarity=-0.101 Sum_probs=30.9
Q ss_pred CCCeEEecccccccceecCCCcccchHHHHhhhhhhhccCcCCCCCCCCCCCCC
Q 026284 5 CICVLEYQGRNLLSCTAILFEKFAHLVEYMRDFEIETIGMKKTPRRCSDVKCGS 58 (240)
Q Consensus 5 ~~kViElHG~sl~~~~C~~C~~~~~~~ey~r~~~~~~~~~~~~~p~C~~~~CgG 58 (240)
+...+.+|. +...-.|..|++.|.....+..-...-. ....-.|+ .|+-
T Consensus 16 ~~~~~~~~~-~~~~h~C~~Cgk~F~~~~~L~~H~~~H~--~~k~~~C~--~C~k 64 (85)
T 2lv2_A 16 GAGVLGLSA-SAECHLCPVCGESFASKGAQERHLRLLH--AAQVFPCK--YCPA 64 (85)
T ss_dssp CCSCCSSCC-CCTTEECTTSCCEESSHHHHHHHHHTTS--CSSSEECT--TSSC
T ss_pred CCCCCCCCC-CCCCEECCCCCCCcCcHHHHhhhhhhcc--CCCccCCC--CCCC
Confidence 445667787 7777789999999887655543221111 12345698 7884
Done!