BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026286
(240 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZPE4|FBW2_ARATH F-box protein FBW2 OS=Arabidopsis thaliana GN=FBW2 PE=1 SV=1
Length = 317
Score = 250 bits (639), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 133/226 (58%), Positives = 166/226 (73%), Gaps = 14/226 (6%)
Query: 19 SASAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVV 78
+ AGSL+TL++PRS +++S V +A +LS++TFLDLSYC KIG A++AIGKHCK L
Sbjct: 102 AQHAGSLKTLKVPRSGLTNSGVVNVAEKLSSLTFLDLSYCCKIGPEAIQAIGKHCKSLRE 161
Query: 79 LCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDL 138
CRNMHPLD A +S DDEA AIA+TMPKLKRLE+AYH +STE VLKILS C LEFL+L
Sbjct: 162 FCRNMHPLDVASVVSHDDEAYAIANTMPKLKRLEIAYHRVSTEGVLKILSCCVFLEFLEL 221
Query: 139 RGCWDVKLDDKFMKGNFPNLKVLGPFVMDYYE-INDWDD-CSDY-SDGSEYLAWEFLA-G 194
RGCWDV+LD+KF K FP++KVLGP V+ +Y+ INDW+D CSDY SDGS+YLAWEF G
Sbjct: 222 RGCWDVQLDNKFFKEKFPDMKVLGPRVIGFYDMINDWEDCCSDYFSDGSDYLAWEFFEDG 281
Query: 195 EMGDYDDDDEIYEGMWDDEGRLEELELRFYDGIEEDAGIYGWPPSP 240
MG++ +D+ +E WDD E L D + WPPSP
Sbjct: 282 VMGEFYEDE--FEHGWDDNFYAENAVL--------DMEPHIWPPSP 317
>sp|Q9M0U9|SKI19_ARATH F-box protein SKIP19 OS=Arabidopsis thaliana GN=SKIP19 PE=1 SV=1
Length = 302
Score = 72.8 bits (177), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 8/141 (5%)
Query: 22 AGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLC 80
+ +L++LRL R S+++D + +L + L+LSYCS +L +G+ C + L
Sbjct: 114 SSNLRSLRLIRCSQITDDGFVEAVVKL-PLEELELSYCS-FSVESLRVVGQCCLNMKTLK 171
Query: 81 RNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRG 140
N HP + DD+A AIA TMPKL+ L++ + +S + IL +C+ LE LDLR
Sbjct: 172 LNKHP-----QKENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRR 226
Query: 141 CWDVKLDDKFMKGNFPNLKVL 161
C++V L K F ++KV+
Sbjct: 227 CFNVNLVGDLQKRCFESVKVV 247
>sp|Q9FDX1|SKIP1_ARATH F-box protein SKIP1 OS=Arabidopsis thaliana GN=SKIP1 PE=1 SV=1
Length = 300
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 10 CADVDLFPGSASAGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEA 68
C+D L + +LQ L + S ++D+ + +IA R ++ LD+SYC +I L
Sbjct: 99 CSDHALSYAADRCPNLQVLAIRSSPNVTDASMTKIAFRCRSLKELDISYCHEISHDTLVM 158
Query: 69 IGKHCKLLVVLCRNMH----------PLDTADKLSQD--DEANAIASTMPKLKRLEMAYH 116
IG++C L +L RN+ P + D QD EA+AI M L+ LE+ +
Sbjct: 159 IGRNCPNLRILKRNLMDWSSRHIGSVPTEYLDACPQDGDTEADAIGKHMINLEHLEIQFS 218
Query: 117 VISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVL 161
+S + + I C LE+LDL GC V L + + N LK L
Sbjct: 219 RLSVKGLASICEGCPKLEYLDLFGC--VHLSSRDITSNVSRLKWL 261
>sp|Q9S9V9|FBL23_ARATH Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana
GN=FBL23 PE=4 SV=1
Length = 449
Score = 64.3 bits (155), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 2/141 (1%)
Query: 22 AGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLC 80
+ +L++L L R ++D VA+ ++ + +L++SYC G +L IG+ C L L
Sbjct: 276 SSNLKSLGLVRCFPITDEGVAKAVSKVPLLEYLEVSYCLFSGE-SLRDIGRSCPNLKTLK 334
Query: 81 RNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRG 140
N P DD A AIA +MP+L+ L++ + ++ + + IL C LE LDLR
Sbjct: 335 LNRAPEIMFSNSGFDDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQ 394
Query: 141 CWDVKLDDKFMKGNFPNLKVL 161
C+++ L K F +K L
Sbjct: 395 CFNINLVGDLKKRCFERIKDL 415
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 95 DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKL 146
DDE AIA TMP+L+ L++ + ++ + IL +C L LDLR C+++ L
Sbjct: 19 DDEPLAIAETMPELRHLKLFGNGLTNLRLEAILDNCVHLVHLDLRRCFNINL 70
>sp|Q9M096|FBL19_ARATH Putative F-box/LRR-repeat protein 19 OS=Arabidopsis thaliana
GN=FBL19 PE=4 SV=1
Length = 301
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 35 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNM----------- 83
++D+ + +IA + LD+SY I +L +G+ C+ L +L RN+
Sbjct: 137 VTDASMEKIAMNCPNLRELDISYSYGITHESLITLGRSCQNLKILKRNLLPRLGPSLPTI 196
Query: 84 -HPLDTADKLSQ--DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRG 140
PLD + + EA I M +LK LE+ Y ++ + + C+ LE++DLRG
Sbjct: 197 VAPLDYLATFPRYGNIEARIIGKYMTQLKHLEIRYSTLTARGLDSVCKGCSNLEYMDLRG 256
Query: 141 CWDVKLDDKFMKGNFPNLKVLGPFV 165
C + D + N LK L +
Sbjct: 257 CISLTRSD--INTNTSGLKNLTEII 279
>sp|Q9S9V8|FBL9_ARATH Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana GN=FBL9
PE=4 SV=1
Length = 246
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 40 VAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEAN 99
V + A +L + LD++Y S I L+ +G+ C L L N T D D A
Sbjct: 138 VVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNC----TGDVKCCDKVAL 193
Query: 100 AIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 152
AIA TMP L+ L++ + +S + IL C L+ L L C ++ + +K
Sbjct: 194 AIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNINIVGDIVK 246
>sp|Q9M0U8|FBL21_ARATH Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana
GN=FBL21 PE=4 SV=1
Length = 304
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 66 LEAIGKHCKLLVVLCRNM-------------HPLDTADKLSQDDEANAIASTMPKLKRLE 112
L+AIG C L L N + LD L DD+A AIA +MPKL L+
Sbjct: 181 LKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMGPLECDDDALAIAESMPKLHHLQ 240
Query: 113 MAYHVISTEIVLKILSSCALLEFLDLRGCWDVKL 146
+ + ++ + IL C LE LD+R C+ + L
Sbjct: 241 LMANRLTNTGLNAILDGCPHLEHLDVRKCFRISL 274
>sp|Q9M0U7|FB221_ARATH Putative F-box protein At4g05475 OS=Arabidopsis thaliana
GN=At4g05475 PE=4 SV=2
Length = 309
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 66 LEAIGKHCKLLVVLCRNMHPLDTADKLSQ---------DDEANAIASTMPKLKRLEMAYH 116
L+AIG C L L N + A +SQ DD+A AIA +MPKL+ L++ +
Sbjct: 175 LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECDDDALAIAESMPKLRHLQLMGN 234
Query: 117 VISTEIVLKILSSCALL-EFLDLRGCWDVKLDDKFMKGNFPNLKVL 161
++ + IL C L E LD+R C+++ L K +K L
Sbjct: 235 GLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRCMKRIKEL 280
>sp|Q8J2J3|AMN1_PICAD Antagonist of mitotic exit network protein 1 OS=Pichia angusta
(strain ATCC 26012 / NRRL Y-7560 / DL-1) GN=AMN1 PE=3
SV=1
Length = 511
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 60/145 (41%), Gaps = 9/145 (6%)
Query: 22 AGSLQTLRLPRSEMSDSI-VAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLC 80
L+ L LP S++ D + + QIA + + LDL C I L AIG HC + L
Sbjct: 283 TAKLKKLVLPGSKVVDDVYLQQIAPLMPNLVHLDLRACEHITDAGLYAIGTHCPKIETLN 342
Query: 81 RNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKI-LSSCALLEFLDLR 139
H T L D + I + LK L +A +S I+ + LE L L
Sbjct: 343 CGRH---TKGILVTDASISHIVANC-NLKTLGVAGCGVSDAILWSLAYQKGHQLERLSLN 398
Query: 140 GCW---DVKLDDKFMKGNFPNLKVL 161
CW D + M FP L VL
Sbjct: 399 SCWRLTDAGISSVLMMDRFPRLAVL 423
>sp|Q9M0U6|FBL22_ARATH Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana
GN=FBL22 PE=4 SV=1
Length = 307
Score = 41.2 bits (95), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
Query: 22 AGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCR 81
+ +L+ LR+ +++ + + +L + L+L YCS I + IG+ C L +
Sbjct: 123 SSNLRRLRVKGGQITSVGIFEAIVKLPLLEELELLYCS-IEEEHFKTIGQACPNL----K 177
Query: 82 NMHPLDTADKLSQ-DDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRG 140
+ + L++ D++A AIA TMP L L++ + ++ + IL C LE LDLR
Sbjct: 178 TLKLVGFWSHLNESDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQ 237
Query: 141 CWDVKL 146
C+++ L
Sbjct: 238 CFNINL 243
>sp|Q6NW95|FXL15_DANRE F-box/LRR-repeat protein 15 OS=Danio rerio GN=fbxl15 PE=2 SV=2
Length = 296
Score = 40.0 bits (92), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 11 ADVDLFPGSASAGSLQTLRLPR-SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAI 69
D DL P LQ + L +++S + ++ + L L++C + + AL ++
Sbjct: 99 TDTDLLPVIGQNQQLQHVDLRGCAQLSRRALVAVSLSCPRLQHLSLAHCEWVDSLALRSL 158
Query: 70 GKHCKLLVVLCRNMHPLD-TADKLSQDDEANAIASTMPKLKRLEMAYHV-ISTEIVLKIL 127
HC +L LD TA + +D +A P+L+ L +A + I+ V ++
Sbjct: 159 ADHCPML-------RSLDLTACRQLKDPAVCYLAGKCPELRALSVAVNANITDTAVEEVA 211
Query: 128 SSCALLEFLDLRGCWDVK 145
C +E LDL GC V+
Sbjct: 212 KKCREMERLDLTGCLRVR 229
>sp|Q9CZV8|FXL20_MOUSE F-box/LRR-repeat protein 20 OS=Mus musculus GN=Fbxl20 PE=1 SV=3
Length = 436
Score = 40.0 bits (92), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 89/230 (38%), Gaps = 44/230 (19%)
Query: 37 DSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL----------------C 80
D I A + G + L L C+++ AL+ IG HC LV L C
Sbjct: 185 DGIQALVRG-CGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITIC 243
Query: 81 RNMHPLDT--ADKLSQDDEA--NAIASTMPKLKRLEMAYHVISTEIVLKILS-SCALLEF 135
R H L + A S +A NA+ P+L+ LE+A T++ L+ +C LE
Sbjct: 244 RGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEK 303
Query: 136 LDLRGCWDVKLDDKFMKGNF--PNLKVL------------------GPFVMDYYEINDWD 175
+DL C + D ++ + P L+VL G D E+ + D
Sbjct: 304 MDLEECVQIT-DSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELD 362
Query: 176 DCSDYSDGS-EYLAWEFLAGEMGDYDDDDEIYEGMWDDEGRLEELELRFY 224
+C +D S E+L + YD G+ L +++ Y
Sbjct: 363 NCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAY 412
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 25 LQTLRLPR-SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNM 83
L+ L + R S+++D +A + +DL C +I L + HC L VL +
Sbjct: 275 LRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSH 334
Query: 84 HPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWD 143
L T D + A +L+ +E+ + T+ L+ L SC LE ++L C
Sbjct: 335 CELITDDGIRHLGNG---ACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQ 391
Query: 144 V-KLDDKFMKGNFPNLKVLGPF 164
+ + K ++ + PN+KV F
Sbjct: 392 ITRAGIKRLRTHLPNIKVHAYF 413
>sp|Q96IG2|FXL20_HUMAN F-box/LRR-repeat protein 20 OS=Homo sapiens GN=FBXL20 PE=1 SV=2
Length = 436
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 89/230 (38%), Gaps = 44/230 (19%)
Query: 37 DSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL----------------C 80
D I A + G + L L C+++ AL+ IG HC LV L C
Sbjct: 185 DGIQALVRG-CGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITIC 243
Query: 81 RNMHPLDT--ADKLSQDDEA--NAIASTMPKLKRLEMAYHVISTEIVLKILS-SCALLEF 135
R H L + A S +A NA+ P+L+ LE+A T++ L+ +C LE
Sbjct: 244 RGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEK 303
Query: 136 LDLRGCWDVKLDDKFMKGNF--PNLKVL------------------GPFVMDYYEINDWD 175
+DL C + D ++ + P L+VL G D E+ + D
Sbjct: 304 MDLEECVQIT-DSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELD 362
Query: 176 DCSDYSDGS-EYLAWEFLAGEMGDYDDDDEIYEGMWDDEGRLEELELRFY 224
+C +D S E+L + YD G+ L +++ Y
Sbjct: 363 NCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAY 412
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 25 LQTLRLPR-SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNM 83
L+ L + R S+++D +A + +DL C +I L + HC L VL +
Sbjct: 275 LRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSH 334
Query: 84 HPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWD 143
L T D + A +L+ +E+ + T+ L+ L SC LE ++L C
Sbjct: 335 CELITDDGIRHLGNG---ACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQ 391
Query: 144 V-KLDDKFMKGNFPNLKVLGPF 164
+ + K ++ + PN+KV F
Sbjct: 392 ITRAGIKRLRTHLPNIKVHAYF 413
>sp|Q58DG6|FXL20_BOVIN F-box/LRR-repeat protein 20 OS=Bos taurus GN=FBXL20 PE=2 SV=2
Length = 436
Score = 40.0 bits (92), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 89/230 (38%), Gaps = 44/230 (19%)
Query: 37 DSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL----------------C 80
D I A + G + L L C+++ AL+ IG HC LV L C
Sbjct: 185 DGIQALVRG-CGGLKALFLKGCTQLEDEALKYIGAHCPELVTLNLQTCLQITDEGLITIC 243
Query: 81 RNMHPLDT--ADKLSQDDEA--NAIASTMPKLKRLEMAYHVISTEIVLKILS-SCALLEF 135
R H L + A S +A NA+ P+L+ LE+A T++ L+ +C LE
Sbjct: 244 RGCHKLQSLCASGCSNITDAILNALGQNCPRLRILEVARCSQLTDVGFTTLARNCHELEK 303
Query: 136 LDLRGCWDVKLDDKFMKGNF--PNLKVL------------------GPFVMDYYEINDWD 175
+DL C + D ++ + P L+VL G D E+ + D
Sbjct: 304 MDLEECVQIT-DSTLIQLSIHCPRLQVLSLSHCELITDDGIRHLGNGACAHDQLEVIELD 362
Query: 176 DCSDYSDGS-EYLAWEFLAGEMGDYDDDDEIYEGMWDDEGRLEELELRFY 224
+C +D S E+L + YD G+ L +++ Y
Sbjct: 363 NCPLITDASLEHLKSCHSLERIELYDCQQITRAGIKRLRTHLPNIKVHAY 412
Score = 35.4 bits (80), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 64/142 (45%), Gaps = 5/142 (3%)
Query: 25 LQTLRLPR-SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNM 83
L+ L + R S+++D +A + +DL C +I L + HC L VL +
Sbjct: 275 LRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLSH 334
Query: 84 HPLDTADKLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWD 143
L T D + A +L+ +E+ + T+ L+ L SC LE ++L C
Sbjct: 335 CELITDDGIRHLGNG---ACAHDQLEVIELDNCPLITDASLEHLKSCHSLERIELYDCQQ 391
Query: 144 V-KLDDKFMKGNFPNLKVLGPF 164
+ + K ++ + PN+KV F
Sbjct: 392 ITRAGIKRLRTHLPNIKVHAYF 413
>sp|P34284|YKK7_CAEEL Uncharacterized F-box/LRR-repeat protein C02F5.7 OS=Caenorhabditis
elegans GN=C02F5.7 PE=4 SV=3
Length = 466
Score = 38.5 bits (88), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 63/131 (48%), Gaps = 21/131 (16%)
Query: 20 ASAGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVV 78
A G+++ L L + +++D V IA +A+ +L +S C++I +L ++G+H L V
Sbjct: 250 AHMGAIKKLNLLQCFQLTDITVQNIANGATALEYLCMSNCNQISDRSLVSLGQHSHNLKV 309
Query: 79 L-------------------CRNMHPLDTAD-KLSQDDEANAIASTMPKLKRLEMAYHVI 118
L CR + LD D L D N++A+ L+ L +++ +
Sbjct: 310 LELSGCTLLGDNGFIPLARGCRQLERLDMEDCSLISDHTINSLANNCTALRELSLSHCEL 369
Query: 119 STEIVLKILSS 129
T+ ++ L+S
Sbjct: 370 ITDESIQNLAS 380
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 52/122 (42%), Gaps = 8/122 (6%)
Query: 22 AGSLQTLRLPRSE-MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLC 80
G L+ L L E + DS + R + L L C ++ + E +G++C L
Sbjct: 122 GGFLKELSLKGCENVHDSALRTFTSRCPNLEHLSLYRCKRVTDASCENLGRYCHKL---- 177
Query: 81 RNMHPLDTADKLSQDDEANAIASTMPKLKRLEMAY-HVISTEIVLKILSSCALLEFLDLR 139
N L+ ++ D I P L L +++ I V ILS+C L+ L LR
Sbjct: 178 -NYLNLENCSSIT-DRAMKYIGDGCPNLSYLNISWCDAIQDRGVQIILSNCKSLDTLILR 235
Query: 140 GC 141
GC
Sbjct: 236 GC 237
>sp|A1A5X2|FBXL7_DANRE F-box/LRR-repeat protein 7 OS=Danio rerio GN=fbxl7 PE=2 SV=1
Length = 489
Score = 38.5 bits (88), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 100 AIASTMPKLKRLEMA-YHVISTEIVLKILSSCALLEFLDLRGCWDV 144
+A + P+L+RLE+A + +S E V +++S C LE LD+ GC V
Sbjct: 204 TVAQSCPELRRLEVAGCYNVSNEAVFEVVSRCPNLEHLDVSGCSKV 249
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 54/123 (43%), Gaps = 21/123 (17%)
Query: 40 VAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHC-------------------KLLVVLC 80
++ + G+ ++ FLD++ C + L I HC + LV+ C
Sbjct: 262 LSPLHGQQISIRFLDMTDCFALEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRFLVIYC 321
Query: 81 RNMHPLDTAD-KLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSS-CALLEFLDL 138
+ L +D + D IA +L+ L +A+ T++ ++ ++ C+ L +L+
Sbjct: 322 PGVRELSVSDCRFISDFGLREIAKLEGRLRYLSIAHCSRITDVGVRYVAKYCSRLRYLNA 381
Query: 139 RGC 141
RGC
Sbjct: 382 RGC 384
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 37.4 bits (85), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 11 ADVDLFPGSASAGSLQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAI 69
D+ + + +L+ L + R E+ + + I ++T L L +C K+G AL AI
Sbjct: 412 GDIAMCSIAKGCRNLKKLHIRRCYEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAI 471
Query: 70 GKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLEMA 114
GK C L + +++S D AIA P+L L+++
Sbjct: 472 GKGCSL------QQLNVSGCNQIS-DAGITAIARGCPQLTHLDIS 509
Score = 36.2 bits (82), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 7/93 (7%)
Query: 53 LDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE 112
L L YC +IG AL+ IGK CK L +L H +D + D +IA LK+L
Sbjct: 377 LALLYCQRIGNSALQEIGKGCKSLEIL----HLVDCSG--IGDIAMCSIAKGCRNLKKLH 430
Query: 113 MAY-HVISTEIVLKILSSCALLEFLDLRGCWDV 144
+ + I + ++ I C L L LR C V
Sbjct: 431 IRRCYEIGNKGIISIGKHCKSLTELSLRFCDKV 463
>sp|Q7SZ73|FXL15_XENLA F-box/LRR-repeat protein 15 OS=Xenopus laevis GN=fbxl15 PE=2 SV=1
Length = 292
Score = 37.0 bits (84), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 35 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLC-------------- 80
++D + I G+ +T+++L+ C ++ +L AI C L +C
Sbjct: 94 LTDKELLPIIGQNHHLTYINLNSCGQLTRQSLVAISLSCPHLQNICLGHCDWVDCLSMRS 153
Query: 81 -----RNMHPLD-TADKLSQDDEANAIASTMPKLKRLEMAYHV-ISTEIVLKILSSCALL 133
+ + +D TA + +DD + + +LK L +A + IS V + SC L
Sbjct: 154 LADHCKCLEAIDLTACRQLKDDAISYLVQKSTRLKSLSLAVNANISDIAVEETAKSCRDL 213
Query: 134 EFLDLRGCWDVKLD 147
E LDL GC VK D
Sbjct: 214 EHLDLTGCLRVKND 227
>sp|Q9SMY8|FBL15_ARATH F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=1
SV=2
Length = 990
Score = 36.2 bits (82), Expect = 0.21, Method: Composition-based stats.
Identities = 34/116 (29%), Positives = 54/116 (46%), Gaps = 14/116 (12%)
Query: 50 VTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTMPKLK 109
+T LD S+CS++ L A C L+ L P +D LS + +P L
Sbjct: 686 LTSLDASFCSQLRDDCLSATTASCPLIESLVLMSCPSIGSDGLSS-------LNGLPNLT 738
Query: 110 RLEMAY-HVISTEIVLKILSSCALLEFLDLRGC---WDVKLDDKFMKGNFPNLKVL 161
L+++Y +++ E V K SC L+ L L+ C D L+ + +G P L+ L
Sbjct: 739 VLDLSYTFLMNLEPVFK---SCIQLKVLKLQACKYLTDSSLEPLYKEGALPALEEL 791
>sp|Q9UJT9|FBXL7_HUMAN F-box/LRR-repeat protein 7 OS=Homo sapiens GN=FBXL7 PE=2 SV=1
Length = 491
Score = 35.8 bits (81), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 100 AIASTMPKLKRLEMA-YHVISTEIVLKILSSCALLEFLDLRGCWDV 144
IA P+L+RLE++ + IS E V ++S C LE LD+ GC V
Sbjct: 206 TIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKV 251
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 33/154 (21%), Positives = 66/154 (42%), Gaps = 26/154 (16%)
Query: 40 VAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHC-------------------KLLVVLC 80
++ + G+ ++ +LD++ C + L I HC + LV+ C
Sbjct: 264 LSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYC 323
Query: 81 RNMHPLDTAD-KLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSS-CALLEFLDL 138
++ L +D + D IA +L+ L +A+ T++ ++ ++ C+ L +L+
Sbjct: 324 ASIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRVTDVGIRYVAKYCSKLRYLNA 383
Query: 139 RGCWDVK-LDDKFMKGNFPNLKVL----GPFVMD 167
RGC + +++ N LK L P V D
Sbjct: 384 RGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSD 417
>sp|Q6FRM1|AMN1_CANGA Antagonist of mitotic exit network protein 1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=AMN1 PE=3 SV=1
Length = 511
Score = 35.8 bits (81), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 8 FLCADVDLFPGS--ASAGSLQTLRLPRSEM-SDSIVAQIAGRLSAVTFLDLSYCSKIGAP 64
++C ++ L P + S L+ L LP +++ +DS + QI L + LDL C I
Sbjct: 287 YVCPNI-LPPVNWFQSLTKLEKLILPGNKLINDSYLIQICRYLPNLKVLDLRACDNITDA 345
Query: 65 ALEAIGKHCKLLV 77
+ A+G HCK LV
Sbjct: 346 GIVAVGTHCKQLV 358
>sp|Q5BJ29|FBXL7_MOUSE F-box/LRR-repeat protein 7 OS=Mus musculus GN=Fbxl7 PE=1 SV=1
Length = 491
Score = 35.8 bits (81), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 100 AIASTMPKLKRLEMA-YHVISTEIVLKILSSCALLEFLDLRGCWDV 144
IA P+L+RLE++ + IS E V ++S C LE LD+ GC V
Sbjct: 206 TIAQCCPELRRLEVSGCYNISNEAVFDVVSLCPNLEHLDVSGCSKV 251
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 63/144 (43%), Gaps = 22/144 (15%)
Query: 40 VAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHC-------------------KLLVVLC 80
++ + G+ ++ +LD++ C + L I HC + LV+ C
Sbjct: 264 LSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRYLVIYC 323
Query: 81 RNMHPLDTAD-KLSQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSS-CALLEFLDL 138
++ L +D + D IA +L+ L +A+ T++ ++ ++ C+ L +L+
Sbjct: 324 TSIKELSVSDCRFVSDFGLREIAKLESRLRYLSIAHCGRITDVGIRYVAKYCSKLRYLNA 383
Query: 139 RGCWDVK-LDDKFMKGNFPNLKVL 161
RGC + +++ N LK L
Sbjct: 384 RGCEGITDHGVEYLAKNCTKLKSL 407
>sp|E6ZHJ8|FXL15_DICLA F-box/LRR-repeat protein 15 OS=Dicentrarchus labrax GN=fbxl15 PE=3
SV=1
Length = 292
Score = 35.4 bits (80), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 26 QTLRLPRSEMSDSIV----AQIAGRLSAVTF--LDLSYCSKIGAPALEAIGKHCKLLVVL 79
Q L R +MS + + +A LS + L L++C + + +L ++ HC
Sbjct: 105 QNQHLQRVDMSGCVCLTRHSLVAVSLSCMHLQHLGLAHCEWVDSLSLRSLADHCG----- 159
Query: 80 CRNMHPLD-TADKLSQDDEANAIASTMPKLKRLEMAYHV-ISTEIVLKILSSCALLEFLD 137
+ +D TA + +DD +A KL+ L +A + I+ E V ++ +C LE LD
Sbjct: 160 --GLQSIDLTACRQLKDDAICYLAKKCLKLRSLSLAVNANITDESVEEVAKNCRGLEQLD 217
Query: 138 LRGCWDVK 145
L GC V+
Sbjct: 218 LTGCLRVR 225
>sp|Q5R3Z8|FBXL2_PONAB F-box/LRR-repeat protein 2 OS=Pongo abelii GN=FBXL2 PE=2 SV=1
Length = 423
Score = 33.9 bits (76), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 70/182 (38%), Gaps = 50/182 (27%)
Query: 33 SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLL---------------- 76
S ++D V QI + L LS CS + +L A+G +C L
Sbjct: 219 SRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGF 278
Query: 77 VVLCRNMHPLDTAD----KLSQDDEANAIASTMPKLKRLEMAY----------H------ 116
+L RN H L+ D L D ++ PKL+ L +++ H
Sbjct: 279 TLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTC 338
Query: 117 -------------VISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKVLG 162
++ T++ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 339 GHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHA 398
Query: 163 PF 164
F
Sbjct: 399 YF 400
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 35 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCK-LLVVLCRNMHPL-DTADKL 92
+++S + I+ + +L+LS+C +I +EA+ + C+ L +L R L D A K
Sbjct: 143 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 93 SQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 152
Q+ ++ + R I+ E V++I C L+ L L GC + L D +
Sbjct: 203 IQNYCHELVSLNLQSCSR-------ITDEGVVQICRGCHRLQALCLSGCSN--LTDASLT 253
Query: 153 G---NFPNLKVL 161
N P L++L
Sbjct: 254 ALGLNCPRLQIL 265
>sp|Q8N531|FBXL6_HUMAN F-box/LRR-repeat protein 6 OS=Homo sapiens GN=FBXL6 PE=2 SV=1
Length = 539
Score = 33.9 bits (76), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 58/122 (47%), Gaps = 20/122 (16%)
Query: 50 VTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIASTM---- 105
+TFL LS C + A AL + K C C +H LD + E+ A+ S +
Sbjct: 222 LTFLKLSGCHGVTADALVMLAKAC------C-QLHSLDLQHSMV---ESTAVVSFLEEAG 271
Query: 106 PKLKRLEMAYHVISTEIVLKILSS-CALLEFLDL-----RGCWDVKLDDKFMKGNFPNLK 159
++++L + Y +T I+ +L S C L+ L++ R ++L + ++ P L+
Sbjct: 272 SRMRKLWLTYSSQTTAILGALLGSCCPQLQVLEVSTGINRNSIPLQLPVEALQKGCPQLQ 331
Query: 160 VL 161
VL
Sbjct: 332 VL 333
>sp|Q9UKC9|FBXL2_HUMAN F-box/LRR-repeat protein 2 OS=Homo sapiens GN=FBXL2 PE=1 SV=3
Length = 423
Score = 33.5 bits (75), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 70/182 (38%), Gaps = 50/182 (27%)
Query: 33 SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLL---------------- 76
S ++D V QI + L LS CS + +L A+G +C L
Sbjct: 219 SRITDEGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQILEAARCSHLTDAGF 278
Query: 77 VVLCRNMHPLDTAD----KLSQDDEANAIASTMPKLKRLEMAY----------H------ 116
+L RN H L+ D L D ++ PKL+ L +++ H
Sbjct: 279 TLLARNCHELEKMDLEECILITDSTLIQLSIHCPKLQALSLSHCELITDDGILHLSNSTC 338
Query: 117 -------------VISTEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKVLG 162
++ T++ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 339 GHERLRVLELDNCLLITDVALEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHA 398
Query: 163 PF 164
F
Sbjct: 399 YF 400
Score = 31.2 bits (69), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 35 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCK-LLVVLCRNMHPL-DTADKL 92
+++S + I+ + +L+LS+C +I +EA+ + C+ L +L R L D A K
Sbjct: 143 ITNSSLKGISEGCRNLEYLNLSWCDQITKDGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 93 SQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 152
Q+ ++ + R I+ E V++I C L+ L L GC + L D +
Sbjct: 203 IQNYCHELVSLNLQSCSR-------ITDEGVVQICRGCHRLQALCLSGCSN--LTDASLT 253
Query: 153 G---NFPNLKVL 161
N P L++L
Sbjct: 254 ALGLNCPRLQIL 265
>sp|Q9LPL4|SKP2A_ARATH F-box protein SKP2A OS=Arabidopsis thaliana GN=SKP2A PE=1 SV=1
Length = 360
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 23/194 (11%)
Query: 25 LQTLRLPRS-EMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNM 83
LQ L L +S +++D + +A +T L+LS C+ A+ + + C+ L VL
Sbjct: 119 LQELDLSKSLKITDRSLYALAHGCPDLTKLNLSGCTSFSDTAIAYLTRFCRKLKVL---- 174
Query: 84 HPLDTADKLSQDDEANAIASTMPKLKRLEMAY-HVISTEIVLKILSSCALLEFLDLRGCW 142
L K D+ AI + +++ L + + IS + V+ + C L LDL GC
Sbjct: 175 -NLCGCVKAVTDNALEAIGNNCNQMQSLNLGWCENISDDGVMSLAYGCPDLRTLDLCGCV 233
Query: 143 DVKLDDKFMKGNF-PNLKVLGPFVMDYYEINDWDDCSDYSDGSEY-LAWEFLAGEMGDYD 200
+ + ++ +L+ LG YY C + +D + Y LA + + G +
Sbjct: 234 LITDESVVALADWCVHLRSLGL----YY-------CRNITDRAMYSLAQSGVKNKPGSW- 281
Query: 201 DDDEIYEGMWDDEG 214
+ +G +D+EG
Sbjct: 282 --KSVKKGKYDEEG 293
>sp|Q5XGC0|FXL15_XENTR F-box/LRR-repeat protein 15 OS=Xenopus tropicalis GN=fbxl15 PE=2
SV=1
Length = 292
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 15/98 (15%)
Query: 55 LSYCSKIGAPALEAIGKHCKLL----VVLCRNMHPLDTADKLSQDDEANAIASTMPKLKR 110
L +C + +L ++ HCK L + CR + +DD + + +LK
Sbjct: 140 LGHCEWVDCLSLRSLVDHCKCLEAIDLTACRQL----------KDDTISYLVQKSTRLKS 189
Query: 111 LEMAYHV-ISTEIVLKILSSCALLEFLDLRGCWDVKLD 147
L +A + IS V + +C LE LDL GC VK D
Sbjct: 190 LSLAVNANISDIAVEETAKNCRDLEHLDLTGCLRVKND 227
>sp|Q0VD31|FBXL4_BOVIN F-box/LRR-repeat protein 4 OS=Bos taurus GN=FBXL4 PE=2 SV=1
Length = 621
Score = 33.1 bits (74), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 73/152 (48%), Gaps = 13/152 (8%)
Query: 20 ASAGSLQTLRLPRSE-MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEA-IGKHCKLLV 77
A L+TL L R + +++S +A++A + LDL +C P L++ G +L
Sbjct: 476 AKCKKLRTLDLWRCKNITESGIAELASGCPLLEELDLGWC-----PTLQSSTGCFARLAR 530
Query: 78 VLCRNMHPLDTADKLSQDDEANAIASTMPKLKRLE-MAYHVISTEIVLKILSSCALLEFL 136
L TA++ D + +AS +L++L+ + ++S + K+L SC L L
Sbjct: 531 QLPNLQKLFLTANRSVCDTDIEELASNCTRLRQLDILGTRMVSPASLRKLLESCKDLSLL 590
Query: 137 DLRGCWDVKLDDKF---MKGNFPNLKVLGPFV 165
D+ C ++D++ + +FP + + F
Sbjct: 591 DVSFC--SQIDNRAVLELSASFPKVFIKKSFT 620
>sp|Q8BH70|FBXL4_MOUSE F-box/LRR-repeat protein 4 OS=Mus musculus GN=Fbxl4 PE=2 SV=1
Length = 621
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 63/155 (40%), Gaps = 28/155 (18%)
Query: 37 DSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLL------------------VV 78
D I + I + + LDL C I + + C LL V
Sbjct: 468 DVIASMIGAKCKNLRTLDLWRCKNITENGIAELASGCVLLEELDLGWCPTLQSSTGCFVR 527
Query: 79 LCRNMHPLD----TADKLSQDDEANAIASTMPKLKRLE-MAYHVISTEIVLKILSSCALL 133
L R + L TA++ D + +AS +L++L+ + ++S + K+L SC L
Sbjct: 528 LARQLPNLQKLFLTANRSVCDTDIEELASNCTRLQQLDILGTRMVSPASLRKLLESCKDL 587
Query: 134 EFLDLRGCWDVKLDDKF---MKGNFPNLKVLGPFV 165
LD+ C ++D+K + +FP + + F
Sbjct: 588 SLLDVSFC--SQIDNKAVLELNASFPKVFIKKSFT 620
>sp|Q8BH16|FBXL2_MOUSE F-box/LRR-repeat protein 2 OS=Mus musculus GN=Fbxl2 PE=1 SV=1
Length = 423
Score = 32.7 bits (73), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 69/182 (37%), Gaps = 50/182 (27%)
Query: 33 SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVV-------------- 78
S ++D V QI + L LS CS + +L A+G +C L V
Sbjct: 219 SRITDDGVVQICRGCHRLQALCLSGCSNLTDASLTALGLNCPRLQVLEAARCSHLTDAGF 278
Query: 79 --LCRNMHPLDTAD----KLSQDDEANAIASTMPKLKRLEMAY----------HVIS--- 119
L RN H L+ D L D ++ PKL+ L +++ H+ S
Sbjct: 279 TLLARNCHELEKMDLEECVLITDSTLVQLSIHCPKLQALSLSHCELITDEGILHLSSSTC 338
Query: 120 ----------------TEIVLKILSSCALLEFLDLRGCWDV-KLDDKFMKGNFPNLKVLG 162
T+ L+ L +C LE L+L C V + K M+ P++KV
Sbjct: 339 GHERLRVLELDNCLLVTDASLEHLENCRGLERLELYDCQQVTRAGIKRMRAQLPHVKVHA 398
Query: 163 PF 164
F
Sbjct: 399 YF 400
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 14/132 (10%)
Query: 35 MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCK-LLVVLCRNMHPL-DTADKL 92
+++S + I+ + +L+LS+C +I +EA+ + C+ L +L R L D A K
Sbjct: 143 VTNSSLKGISEGCRNLEYLNLSWCDQITKEGIEALVRGCRGLKALLLRGCTQLEDEALKH 202
Query: 93 SQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 152
Q+ ++ + R I+ + V++I C L+ L L GC + L D +
Sbjct: 203 IQNHCHELVSLNLQSCSR-------ITDDGVVQICRGCHRLQALCLSGCSN--LTDASLT 253
Query: 153 G---NFPNLKVL 161
N P L+VL
Sbjct: 254 ALGLNCPRLQVL 265
>sp|Q8N1E6|FXL14_HUMAN F-box/LRR-repeat protein 14 OS=Homo sapiens GN=FBXL14 PE=1 SV=1
Length = 418
Score = 32.3 bits (72), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 21/147 (14%)
Query: 23 GSLQTLRLPRSE-MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCR 81
GSL++L L + +SD+ + +A ++ LD+S+C K+G +L I +
Sbjct: 253 GSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQ---------- 302
Query: 82 NMHPLDTADKLS------QDDEANAIASTMPKLKRLEMAYHVISTEIVLKILS-SCALLE 134
LD LS DD N + M L+ L + V T+ L++++ + L
Sbjct: 303 ---GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLT 359
Query: 135 FLDLRGCWDVKLDDKFMKGNFPNLKVL 161
+DL GC + P LKVL
Sbjct: 360 GIDLYGCTRITKRGLERITQLPCLKVL 386
>sp|Q8BID8|FXL14_MOUSE F-box/LRR-repeat protein 14 OS=Mus musculus GN=Fbxl14 PE=2 SV=1
Length = 400
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 21/147 (14%)
Query: 23 GSLQTLRLPRSE-MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCR 81
GSL++L L + +SD+ + +A ++ LD+S+C K+G +L I +
Sbjct: 253 GSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQ---------- 302
Query: 82 NMHPLDTADKLS------QDDEANAIASTMPKLKRLEMAYHVISTEIVLKILS-SCALLE 134
LD LS DD N + M L+ L + V T+ L++++ + L
Sbjct: 303 ---GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLT 359
Query: 135 FLDLRGCWDVKLDDKFMKGNFPNLKVL 161
+DL GC + P LKVL
Sbjct: 360 GIDLYGCTRITKRGLERITQLPCLKVL 386
>sp|Q17R01|FXL14_BOVIN F-box/LRR-repeat protein 14 OS=Bos taurus GN=FBXL14 PE=2 SV=1
Length = 400
Score = 32.3 bits (72), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 64/147 (43%), Gaps = 21/147 (14%)
Query: 23 GSLQTLRLPRSE-MSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCR 81
GSL++L L + +SD+ + +A ++ LD+S+C K+G +L I +
Sbjct: 253 GSLRSLNLRSCDNISDTGIMHLAMGSLRLSGLDVSFCDKVGDQSLAYIAQ---------- 302
Query: 82 NMHPLDTADKLS------QDDEANAIASTMPKLKRLEMAYHVISTEIVLKILS-SCALLE 134
LD LS DD N + M L+ L + V T+ L++++ + L
Sbjct: 303 ---GLDGLKSLSLCSCHISDDGINRMVRQMHGLRTLNIGQCVRITDKGLELIAEHLSQLT 359
Query: 135 FLDLRGCWDVKLDDKFMKGNFPNLKVL 161
+DL GC + P LKVL
Sbjct: 360 GIDLYGCTRITKRGLERITQLPCLKVL 386
>sp|Q8WV35|LRC29_HUMAN Leucine-rich repeat-containing protein 29 OS=Homo sapiens GN=LRRC29
PE=2 SV=1
Length = 223
Score = 32.3 bits (72), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 33 SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL 79
S +SD AQ A + L+LS CS++ L+AIG+ C+ L VL
Sbjct: 137 SRLSDKGWAQAASSWPRLQHLNLSSCSQLIEQTLDAIGQACRQLRVL 183
>sp|C8V4D4|GRRA_EMENI SCF E3 ubiquitin ligase complex F-box protein grrA OS=Emericella
nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 /
NRRL 194 / M139) GN=grrA PE=2 SV=1
Length = 585
Score = 32.0 bits (71), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
Query: 33 SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKL 92
S ++DS V Q+ + + ++DL+ CS++ +++ + KL + + A L
Sbjct: 383 SNINDSAVIQLVKSCNRIRYIDLACCSRLTDRSVQQLATLPKLRRIGLVKCQLITDASIL 442
Query: 93 SQDDEANAIASTMPKLKRLEMAYHVISTEI-VLKILSSCALLEFLDLRG 140
+ A + L+R+ ++Y V T + + +L+SC L L L G
Sbjct: 443 ALARPAQDHSVPCSSLERVHLSYCVNLTMVGIHALLNSCPRLTHLSLTG 491
>sp|Q5EA80|PGTA_BOVIN Geranylgeranyl transferase type-2 subunit alpha OS=Bos taurus
GN=RABGGTA PE=2 SV=1
Length = 567
Score = 31.6 bits (70), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 52/97 (53%), Gaps = 17/97 (17%)
Query: 46 RLSAVTFLDLSYCSKIGA--PALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIAS 103
+L VT LDLS+ +++ A PAL A+ + L VL N + +++ D ++
Sbjct: 461 QLLLVTHLDLSH-NRLRALPPALAAL----RCLEVLQANDNAIESLDGVT---------- 505
Query: 104 TMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRG 140
+P+L+ L + + + VL+ L+SC L L+L+G
Sbjct: 506 NLPRLQELILCNNRLQQPAVLQPLTSCPRLTLLNLQG 542
>sp|Q9SDA8|FBL10_ARATH F-box/LRR-repeat protein 10 OS=Arabidopsis thaliana GN=FBL10 PE=2
SV=1
Length = 656
Score = 31.6 bits (70), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 101 IASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKV 160
I +T L + + + T+ ++ L+S LE LDLRGC +++ + + P LKV
Sbjct: 373 ILATTLSLSHVSLRRCHLLTDHAIQKLASSLKLENLDLRGCRNLRDETLTAVSHLPKLKV 432
Query: 161 LGPFVMDYYEIND 173
L ++D +I+D
Sbjct: 433 L---LLDGADISD 442
>sp|Q4A6A2|SYFB_MYCS5 Phenylalanine--tRNA ligase beta subunit OS=Mycoplasma synoviae
(strain 53) GN=pheT PE=3 SV=2
Length = 726
Score = 31.6 bits (70), Expect = 5.6, Method: Composition-based stats.
Identities = 22/73 (30%), Positives = 34/73 (46%), Gaps = 6/73 (8%)
Query: 130 CALLEFLDLRGCWDVKLDDKFMKGNFPNLKVLGPFVMDYYEINDWDDCSDYSDGSEYLAW 189
C +EF +D+ DDKF K PNL VL + +E+N+ + Y D +A
Sbjct: 634 CLFVEFK-----YDLYFDDKFKKYEAPNLDVLKSIDLT-FELNNNEHLQKYLDKINSVAK 687
Query: 190 EFLAGEMGDYDDD 202
F E+ D+ +
Sbjct: 688 VFEIKEIDDFKKE 700
>sp|Q13309|SKP2_HUMAN S-phase kinase-associated protein 2 OS=Homo sapiens GN=SKP2 PE=1
SV=2
Length = 424
Score = 31.6 bits (70), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 61/167 (36%), Gaps = 23/167 (13%)
Query: 20 ASAGSLQTLRLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLL--- 76
+ LQ L L +SD IV +A S + L+LS CS AL+ + C L
Sbjct: 203 SQCSKLQNLSLEGLRLSDPIVNTLAKN-SNLVRLNLSGCSGFSEFALQTLLSSCSRLDEL 261
Query: 77 -----------VVLCRNMHPLDTADKLS--------QDDEANAIASTMPKLKRLEMAYHV 117
V H +T +L+ Q + + + P L L+++ V
Sbjct: 262 NLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSV 321
Query: 118 ISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMKGNFPNLKVLGPF 164
+ + L+ L L C+D+ + G P LK L F
Sbjct: 322 MLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVF 368
>sp|Q9JHK4|PGTA_MOUSE Geranylgeranyl transferase type-2 subunit alpha OS=Mus musculus
GN=Rabggta PE=1 SV=1
Length = 567
Score = 31.6 bits (70), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 50/97 (51%), Gaps = 17/97 (17%)
Query: 46 RLSAVTFLDLSYCSKIGA--PALEAIGKHCKLLVVLCRNMHPLDTADKLSQDDEANAIAS 103
+L VT LDLS+ +++ A PAL A+ R + L +D + ++ + A
Sbjct: 461 QLLLVTHLDLSH-NRLRALPPALAAL-----------RCLEVLQASDNVLENLDGVA--- 505
Query: 104 TMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRG 140
+P+L+ L + + + L+ L+SC L FL+L+G
Sbjct: 506 NLPRLRELLLCNNRLQQSAALQTLASCPRLVFLNLQG 542
>sp|B5X441|FXL15_SALSA F-box/LRR-repeat protein 15 OS=Salmo salar GN=fbxl15 PE=2 SV=1
Length = 292
Score = 31.6 bits (70), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 58/112 (51%), Gaps = 10/112 (8%)
Query: 38 SIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLD-TADKLSQDD 96
S+VA ++ + + +L L++C + + ++ ++ HC + +D TA + +D+
Sbjct: 124 SLVA-VSLSCTHLQYLGLAHCEWVDSLSIRSLADHCG-------GLRSIDLTACRQLKDE 175
Query: 97 EANAIASTMPKLKRLEMAYHVISTEI-VLKILSSCALLEFLDLRGCWDVKLD 147
++ K++ L +A + T++ V ++ +C LE LDL GC V+ D
Sbjct: 176 AICYLSKKCLKMRSLSVAVNANITDVSVEEVAKNCRELEQLDLTGCLRVRND 227
>sp|Q9M8W9|PP211_ARATH Pentatricopeptide repeat-containing protein At3g04130,
mitochondrial OS=Arabidopsis thaliana GN=At3g04130 PE=2
SV=2
Length = 508
Score = 31.2 bits (69), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 30/70 (42%), Gaps = 11/70 (15%)
Query: 179 DYSDGSEYLAWEFLAGEMGDYDDDDEIYEGMWDDE---------GRLEELELRFYDGIEE 229
+YS E W + G GD D +D++++ + DE G + +L RF D
Sbjct: 46 EYSQSEEI--WNVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWRS 103
Query: 230 DAGIYGWPPS 239
GI W S
Sbjct: 104 ALGILKWAES 113
>sp|Q0P4D1|AMN1_DANRE Protein AMN1 homolog OS=Danio rerio GN=amn1 PE=2 SV=1
Length = 249
Score = 31.2 bits (69), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 27/131 (20%), Positives = 57/131 (43%), Gaps = 22/131 (16%)
Query: 33 SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVL------------- 79
+E++ + +A R + +DL+ C+ + ++A+ +HCK L V+
Sbjct: 91 AEITSEGLEVLAPRCPYLQVVDLTGCTAVTDSGIQALARHCKCLEVISLRGCSALSDKAL 150
Query: 80 ------CRNMHPLDTADKLSQDDEANAIASTM--PKLKRLEMAYHVISTEI-VLKILSSC 130
C+ +H + + D +A+ + LK L+M T++ V +L++C
Sbjct: 151 LELGGNCKMLHSIYFSGTEVTDQGVIGLATGVCSCSLKELQMVRCRNLTDLAVTAVLTNC 210
Query: 131 ALLEFLDLRGC 141
A + + GC
Sbjct: 211 ANIRIFNFHGC 221
>sp|Q9Z0Z3|SKP2_MOUSE S-phase kinase-associated protein 2 OS=Mus musculus GN=Skp2 PE=1
SV=1
Length = 424
Score = 31.2 bits (69), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/132 (24%), Positives = 49/132 (37%), Gaps = 4/132 (3%)
Query: 33 SEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRNMHPLDTADKL 92
S S+S VA + S + L+LS+C ++A H + L K
Sbjct: 241 SGFSESAVATLLSSCSRLDELNLSWCFDFTEKHVQAAVAHLPNTITQLN----LSGYRKN 296
Query: 93 SQDDEANAIASTMPKLKRLEMAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLDDKFMK 152
Q + I P L RL+++ ++ L+ L L C+D+ D
Sbjct: 297 LQKTDLCTIIKRCPNLIRLDLSDSIMLKNDCFPEFFQLNYLQHLSLSRCYDIIPDTLLEL 356
Query: 153 GNFPNLKVLGPF 164
G P LK L F
Sbjct: 357 GEIPTLKTLQVF 368
>sp|Q9M1Q1|FB215_ARATH F-box protein At3g62230 OS=Arabidopsis thaliana GN=At3g62230 PE=1
SV=1
Length = 461
Score = 30.8 bits (68), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 113 MAYHVISTEIVLKILSSCALLEFLDLRGCWDVKLD------DKFMKGNF 155
M + I E++ +++ LLE L+++ CW++ LD D+ MK F
Sbjct: 181 MFFRWIRLEMLSALIAKTPLLEILNIKNCWEIGLDAITGYNDRLMKLVF 229
>sp|O49286|SKP2B_ARATH F-box protein SKP2B OS=Arabidopsis thaliana GN=SKP2B PE=1 SV=1
Length = 360
Score = 30.8 bits (68), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 15/144 (10%)
Query: 25 LQTL--RLPRSEMSDSIVAQIAGRLSAVTFLDLSYCSKIGAPALEAIGKHCKLLVVLCRN 82
LQTL R + ++ D+ V IA + LDLS SKI +L ++ + C N
Sbjct: 92 LQTLVLRQDKPQLEDNAVEAIANHCHELQDLDLSKSSKITDHSLYSLARGCT-------N 144
Query: 83 MHPLDTADKLSQDDEANA-IASTMPKLKRLEMAYHV--ISTEIVLKILSSCALLEFLDLR 139
+ L+ + S D A A + KLK L + V +S + I +C L+ L+L
Sbjct: 145 LTKLNLSGCTSFSDTALAHLTRFCRKLKILNLCGCVEAVSDNTLQAIGENCNQLQSLNLG 204
Query: 140 GCWDVKLDDKFMKGNF--PNLKVL 161
C ++ DD M + P+L+ L
Sbjct: 205 WCENIS-DDGVMSLAYGCPDLRTL 227
>sp|Q9FFR7|FBL87_ARATH Putative F-box/LRR-repeat protein At5g41630 OS=Arabidopsis thaliana
GN=At5g41630 PE=4 SV=1
Length = 455
Score = 30.8 bits (68), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 104 TMPKLKRLEMAYHVISTEIVLKILSSC-ALLEFLDLRGCWDVKLDDK--FMKGNFPNLKV 160
++PKLK L + + I K++S C AL E + + WD + + F+ PNLK+
Sbjct: 173 SLPKLKTLHLYHFKIKLSTFNKLISGCHALEELMMINWKWDESSEPEPCFVTIYLPNLKI 232
Query: 161 LGPFVMDYYEINDWDDCSD 179
L +Y +D+ +D
Sbjct: 233 L-----EYCRFERYDEAND 246
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 92,049,395
Number of Sequences: 539616
Number of extensions: 3903006
Number of successful extensions: 8929
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 8817
Number of HSP's gapped (non-prelim): 170
length of query: 240
length of database: 191,569,459
effective HSP length: 114
effective length of query: 126
effective length of database: 130,053,235
effective search space: 16386707610
effective search space used: 16386707610
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)