BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026288
(240 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZU9|DERL1_ARATH Derlin-1 OS=Arabidopsis thaliana GN=DER1 PE=2 SV=1
Length = 266
Score = 356 bits (913), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 180/266 (67%), Positives = 203/266 (76%), Gaps = 26/266 (9%)
Query: 1 MSSPAEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFF 60
MSSP E+Y+SLPPI KAYGTLC LGL+ +AL +LV +FQ+WRLITN F
Sbjct: 1 MSSPGEFYNSLPPITKAYGTLCFFTTVATQLGLVAPVHIALIPELVLKQFQIWRLITNLF 60
Query: 61 FLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFL 120
FLG FSINFGIRLLMIARYGV LEKGPFERRTADFLWMMIFG+ +LLVLS IP F + FL
Sbjct: 61 FLGGFSINFGIRLLMIARYGVQLEKGPFERRTADFLWMMIFGSFTLLVLSVIPFFWTPFL 120
Query: 121 GISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGH 180
G+SLVFML+Y+WSREFPN+ I++YGLVTLKAFYLPWAMLALDVIFGSP++PDLLGIIAGH
Sbjct: 121 GVSLVFMLLYLWSREFPNANISLYGLVTLKAFYLPWAMLALDVIFGSPIMPDLLGIIAGH 180
Query: 181 LYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQ------------------ 222
LYYFLTVLHPLATGKN LKTPKWV K+VARWRIGAP + Q
Sbjct: 181 LYYFLTVLHPLATGKNYLKTPKWVNKIVARWRIGAPVASVRQAGGVGAAGPGAGGGVGGG 240
Query: 223 --------PERTTGVAFRGRSYRLSD 240
P ++ AFRGRSYRL+D
Sbjct: 241 GAYSSARAPPESSNTAFRGRSYRLTD 266
>sp|Q06397|DERL1_ORYSJ Derlin-1 OS=Oryza sativa subsp. japonica GN=DER1 PE=2 SV=2
Length = 242
Score = 342 bits (876), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 170/242 (70%), Positives = 193/242 (79%), Gaps = 2/242 (0%)
Query: 1 MSSPAEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFF 60
MSSPAEYY+SLPPI KAYGTLC +C L +L+ LAL Y VF KFQ+WRL T+FF
Sbjct: 1 MSSPAEYYNSLPPISKAYGTLCFFATVLCQLQILNPPFLALYYPFVFKKFQIWRLFTSFF 60
Query: 61 FLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFL 120
FLG FSINFGIRLLMIARYGV LEKG FE+RTADFLWMMIFGA+SLL LSAIP YFL
Sbjct: 61 FLGKFSINFGIRLLMIARYGVQLEKGAFEKRTADFLWMMIFGAISLLALSAIPFLDIYFL 120
Query: 121 GISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGH 180
G+ +V ML+YVWSRE+PNSQI++YGLV L++FYLPWAML LDVIFGS ++P LLGI+ GH
Sbjct: 121 GVPMVSMLLYVWSREYPNSQISMYGLVQLRSFYLPWAMLGLDVIFGSEILPGLLGILVGH 180
Query: 181 LYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQP--ERTTGVAFRGRSYRL 238
YYFL+VLHPLATGKN LKTP WV K+VAR+RIG A +P T AFRGRSYRL
Sbjct: 181 TYYFLSVLHPLATGKNYLKTPMWVHKIVARFRIGVQANAPVRPAAANTGSGAFRGRSYRL 240
Query: 239 SD 240
S
Sbjct: 241 SQ 242
>sp|Q4G2J6|DER11_MAIZE Derlin-1.1 OS=Zea mays GN=DER1.1 PE=2 SV=2
Length = 243
Score = 328 bits (842), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 167/244 (68%), Positives = 194/244 (79%), Gaps = 5/244 (2%)
Query: 1 MSSPAEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFF 60
MSSPAEYY SLPPI KAYGTLC + L +L L L+Y LVF KF++WRL+T+FF
Sbjct: 1 MSSPAEYYKSLPPISKAYGTLCFFTTVLVQLQILHPLFLYLDYPLVFKKFEIWRLLTSFF 60
Query: 61 FLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFL 120
FL FS+ FGIRLLMIARYGV LEKG F++RTADFLWMMIFGA+SLLVLS IP+F S+FL
Sbjct: 61 FLAPFSMKFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAISLLVLSIIPLFNSFFL 120
Query: 121 GISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGH 180
GI +V ML+YVWSRE PN+QINIYGLV L++FYLPWAML LDVIFGS L+P LLGI+ GH
Sbjct: 121 GIPMVSMLLYVWSRENPNAQINIYGLVQLRSFYLPWAMLLLDVIFGSSLMPGLLGIMVGH 180
Query: 181 LYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIGAPAINRAQP----ERTTGVAFRGRSY 236
LYYF VLHPLATGK+ LKTPKWV K+VAR+RIG A + +P +GV FRGRSY
Sbjct: 181 LYYFFAVLHPLATGKSYLKTPKWVHKIVARFRIGMQANSPVRPPANGNSGSGV-FRGRSY 239
Query: 237 RLSD 240
RL+
Sbjct: 240 RLNQ 243
>sp|Q4G2J5|DER12_MAIZE Derlin-1.2 OS=Zea mays GN=DER1.2 PE=2 SV=1
Length = 243
Score = 328 bits (841), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 169/244 (69%), Positives = 190/244 (77%), Gaps = 5/244 (2%)
Query: 1 MSSPAEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFF 60
MSSPAEYY SLPPI KAYGTLC + L +L+ L L Y VF KF+VWR+ T+FF
Sbjct: 1 MSSPAEYYKSLPPISKAYGTLCFFTTVLVRLHILNPLFLYLYYPRVFKKFEVWRIFTSFF 60
Query: 61 FLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFL 120
FLG FSINFGIRLLMIARYGV LEKG F++RTADFLWMMIFGA+SLLVLS IP +Y L
Sbjct: 61 FLGPFSINFGIRLLMIARYGVMLEKGAFDKRTADFLWMMIFGAISLLVLSVIPQLNTYVL 120
Query: 121 GISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGH 180
G+ +V MLVYVWSRE PN+QINIYG++ LKAFYLPW ML LDVIFGSPL+P LLGI+ GH
Sbjct: 121 GLPMVSMLVYVWSRENPNAQINIYGILQLKAFYLPWVMLLLDVIFGSPLMPGLLGIMVGH 180
Query: 181 LYYFLTVLHPLATGKNLLKTPKWVQKLVARWRIG----APAINRAQPERTTGVAFRGRSY 236
LYY+ VLHPLATGKN LKTPKWV K+VAR+RIG AP A TG AFRGRSY
Sbjct: 181 LYYYFAVLHPLATGKNYLKTPKWVHKIVARFRIGMQANAPVRAPANGNAGTG-AFRGRSY 239
Query: 237 RLSD 240
RL+
Sbjct: 240 RLNQ 243
>sp|Q54NN1|DERL2_DICDI Probable derlin-2 homolog OS=Dictyostelium discoideum GN=derl2 PE=3
SV=1
Length = 254
Score = 159 bits (403), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 125/214 (58%), Gaps = 6/214 (2%)
Query: 1 MSSPAE-YYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNF 59
M+ P E +Y +LP + K Y T CV + LGL+ L L + LVF K++ WRL TNF
Sbjct: 1 MAQPFEDWYKNLPIVTKIYMTGCVVTSVSVYLGLVGPLRLYLNFPLVFGKYEFWRLFTNF 60
Query: 60 FFLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIF---- 115
FF +NF + + R+ LE+ F R+AD+L+M IFG+ LL++ A +
Sbjct: 61 FFYDEIGMNFFFHMYFLVRHSRLLEESSFRGRSADYLFMWIFGSFLLLIMDAFLFYTKIV 120
Query: 116 -RSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLL 174
+ FL S+ FM++YVWSR PN I+ GL T A YLPW +L + +F L DLL
Sbjct: 121 TKVLFLAPSIAFMVIYVWSRRNPNMHISFLGLFTFSAPYLPWVILIMGYLFNHDLTTDLL 180
Query: 175 GIIAGHLYYFLTVLHPLATGKNLLKTPKWVQKLV 208
G +AGH YYFL +PL + + LLKTP +++ L+
Sbjct: 181 GAVAGHAYYFLEDAYPLISNRRLLKTPGFLKNLM 214
>sp|Q851X7|DERL2_ORYSJ Derlin-2 OS=Oryza sativa subsp. japonica GN=DER2 PE=2 SV=1
Length = 249
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 121/213 (56%), Gaps = 9/213 (4%)
Query: 6 EYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTF 65
E+Y +P I ++Y T V C+L ++ L L KLV +++WRL+TNF +
Sbjct: 7 EWYRQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNPKLVVQHYEIWRLVTNFLYFRKM 66
Query: 66 SINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIF-----R 116
++F + +ARY LE+ F RTADF +M++FGA L L+ IP R
Sbjct: 67 DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYISETFAR 126
Query: 117 SYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGI 176
FL SL FM+VYVWS+ P ++ GL T A YLPW +L ++ GS DLLG+
Sbjct: 127 ILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGM 186
Query: 177 IAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 209
IAGH+YYFL ++P TG+ LKTP +++ L A
Sbjct: 187 IAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFA 219
>sp|Q4G2J4|DER21_MAIZE Derlin-2.1 OS=Zea mays GN=DER2.1 PE=2 SV=2
Length = 249
Score = 152 bits (384), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 121/213 (56%), Gaps = 9/213 (4%)
Query: 6 EYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTF 65
E+Y +P I ++Y T V C+L ++ L L KLV +++WRL+TNF +
Sbjct: 7 EWYRQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNPKLVVQHYEIWRLVTNFLYFRKM 66
Query: 66 SINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIF-----R 116
++F + +ARY LE+ F RTADF +M++FGA L L+ IP R
Sbjct: 67 DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTSIVLIGGMIPYISETFAR 126
Query: 117 SYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGI 176
FL SL FM+VYVWS+ P ++ GL T A YLPW +L ++ GS DLLG+
Sbjct: 127 ILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGM 186
Query: 177 IAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 209
IAGH+YYFL ++P TG+ LKTP +++ L A
Sbjct: 187 IAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFA 219
>sp|Q4G2J3|DER22_MAIZE Derlin-2.2 OS=Zea mays GN=DER2.2 PE=2 SV=1
Length = 249
Score = 152 bits (383), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 85/213 (39%), Positives = 121/213 (56%), Gaps = 9/213 (4%)
Query: 6 EYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTF 65
E+Y +P I ++Y T V C+L ++ L L KLV +++WRL+TNF +
Sbjct: 7 EWYRQMPIITRSYLTAAVVTTVGCTLEIISPYHLYLNPKLVVQHYEIWRLVTNFLYFRKM 66
Query: 66 SINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIF-----R 116
++F + +ARY LE+ F RTADF +M++FGA L L+ IP R
Sbjct: 67 DLDFLFHMFFLARYCKLLEENSFRGRTADFFYMLLFGATVLTGIVLIGGMIPYISETFAR 126
Query: 117 SYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGI 176
FL SL FM+VYVWS+ P ++ GL T A YLPW +L ++ GS DLLG+
Sbjct: 127 ILFLSNSLTFMMVYVWSKHNPFIHMSFLGLFTFTAAYLPWVLLGFSILVGSSTWVDLLGM 186
Query: 177 IAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 209
IAGH+YYFL ++P TG+ LKTP +++ L A
Sbjct: 187 IAGHVYYFLEDVYPRMTGRRPLKTPSFIKALFA 219
>sp|Q5RC74|DERL2_PONAB Derlin-2 OS=Pongo abelii GN=DERL2 PE=2 SV=1
Length = 239
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 127/234 (54%), Gaps = 7/234 (2%)
Query: 8 YHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTFSI 67
Y +PP+ +AY T CV L L+ L +L+F FQ+WRLITNF F G
Sbjct: 10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPVGF 69
Query: 68 NFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRS-YFLGISLVF 126
NF ++ + RY LE+G F RTADF++M +FG +++ +F S FLG +
Sbjct: 70 NFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGG---FLMTLFGLFVSLVFLGQAFTI 126
Query: 127 MLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLT 186
MLVYVWSR P ++N +GL+ +A +LPW ++ ++ G+ ++ DLLGI GH+Y+FL
Sbjct: 127 MLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLE 186
Query: 187 VLHPLATGK-NLLKTPKWVQKLVARWRIGAPAINRAQPERTTGVAFRGRSYRLS 239
+ P G +LKTP + K + P N ER G A+ G RL
Sbjct: 187 DVFPNQPGGIRILKTPS-ILKAIFDTPDEDPNYNPLPEERPGGFAW-GEGQRLG 238
>sp|Q9GZP9|DERL2_HUMAN Derlin-2 OS=Homo sapiens GN=DERL2 PE=1 SV=1
Length = 239
Score = 148 bits (374), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/234 (37%), Positives = 127/234 (54%), Gaps = 7/234 (2%)
Query: 8 YHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTFSI 67
Y +PP+ +AY T CV L L+ L +L+F FQ+WRLITNF F G
Sbjct: 10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPVGF 69
Query: 68 NFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRS-YFLGISLVF 126
NF ++ + RY LE+G F RTADF++M +FG +++ +F S FLG +
Sbjct: 70 NFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGG---FLMTLFGLFVSLVFLGQAFTI 126
Query: 127 MLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLT 186
MLVYVWSR P ++N +GL+ +A +LPW ++ ++ G+ ++ DLLGI GH+Y+FL
Sbjct: 127 MLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLE 186
Query: 187 VLHPLATGK-NLLKTPKWVQKLVARWRIGAPAINRAQPERTTGVAFRGRSYRLS 239
+ P G +LKTP + K + P N ER G A+ G RL
Sbjct: 187 DVFPNQPGGIRILKTPS-ILKAIFDTPDEDPNYNPLPEERPGGFAW-GEGQRLG 238
>sp|Q8BNI4|DERL2_MOUSE Derlin-2 OS=Mus musculus GN=Derl2 PE=2 SV=2
Length = 239
Score = 147 bits (372), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 127/234 (54%), Gaps = 7/234 (2%)
Query: 8 YHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTFSI 67
Y +PP+ +AY T CV L L+ L +L+F FQ+WRLITNF F G
Sbjct: 10 YLQIPPVSRAYTTACVLTTAAVQLELITPFQLYFNPELIFKHFQIWRLITNFLFFGPVGF 69
Query: 68 NFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRS-YFLGISLVF 126
NF ++ + RY LE+G F RTADF++M +FG +++ +F S FLG +
Sbjct: 70 NFLFNMIFLYRYCRMLEEGSFRGRTADFVFMFLFGG---FLMTLFGLFVSLVFLGQAFTI 126
Query: 127 MLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLT 186
MLVYVWSR P ++N +GL+ +A +LPW ++ ++ G+ ++ DLLGI GH+Y+FL
Sbjct: 127 MLVYVWSRRNPYVRMNFFGLLNFQAPFLPWVLMGFSLLLGNSIIVDLLGIAVGHIYFFLE 186
Query: 187 VLHPLATGK-NLLKTPKWVQKLVARWRIGAPAINRAQPERTTGVAFRGRSYRLS 239
+ P G +LKTP + + + P N ER G A+ G RL
Sbjct: 187 DIFPNQPGGIRILKTPS-ILRTIFDTPDEDPNYNPLPEERPGGFAW-GEGQRLG 238
>sp|Q9ZS88|DER22_ARATH Derlin-2.2 OS=Arabidopsis thaliana GN=DER2.2 PE=2 SV=1
Length = 244
Score = 147 bits (370), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 83/213 (38%), Positives = 120/213 (56%), Gaps = 9/213 (4%)
Query: 6 EYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTF 65
E+Y +P I ++Y T V CSL ++ L L LV ++Q WRL+TNF +
Sbjct: 7 EWYKQMPIITRSYLTAAVITTVGCSLDIISPYNLYLNPTLVVKQYQYWRLVTNFLYFRKM 66
Query: 66 SINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIFRSYFLG 121
++F + +ARY LE+ F +TADFL+M++FGA L L+ IP + F
Sbjct: 67 DLDFMFHMFFLARYCKLLEENSFRGKTADFLYMLLFGASVLTGIVLIGGMIPYLSASFAK 126
Query: 122 I-----SLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGI 176
I SL FM+VYVWS++ P ++ GL T A YLPW +L ++ G+ DLLG+
Sbjct: 127 IIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWVDLLGM 186
Query: 177 IAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 209
IAGH YYFL ++P T + LKTP +++ L A
Sbjct: 187 IAGHAYYFLAEVYPRMTNRRPLKTPSFLKALFA 219
>sp|Q8VZ96|DER21_ARATH Derlin-2.1 OS=Arabidopsis thaliana GN=DER2.1 PE=2 SV=3
Length = 244
Score = 145 bits (366), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 119/213 (55%), Gaps = 9/213 (4%)
Query: 6 EYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTF 65
E+Y +P I ++Y T V CSL ++ L L LV ++Q WRL+TNF +
Sbjct: 7 EWYKQMPIITRSYLTAAVVTTVGCSLEIISPYNLYLNPTLVVKQYQFWRLVTNFLYFRKM 66
Query: 66 SINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSL----LVLSAIPIF-----R 116
++F + +ARY LE+ F +TADFL+M++FGA L L+ IP +
Sbjct: 67 DLDFLFHMFFLARYCKLLEENSFRGKTADFLYMLLFGATVLTGIVLIGGMIPYLSVSFSK 126
Query: 117 SYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGI 176
FL SL FM+VYVWS++ P ++ GL T A YLPW +L ++ G+ D LG+
Sbjct: 127 IIFLSNSLTFMMVYVWSKQNPYIHMSFLGLFTFTAAYLPWVLLGFSILVGASAWGDFLGM 186
Query: 177 IAGHLYYFLTVLHPLATGKNLLKTPKWVQKLVA 209
IAGH YYFL ++P T + LKTP +++ L A
Sbjct: 187 IAGHAYYFLAFVYPRMTDRRPLKTPSFLKALFA 219
>sp|Q96Q80|DERL3_HUMAN Derlin-3 OS=Homo sapiens GN=DERL3 PE=1 SV=2
Length = 235
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 130/228 (57%), Gaps = 11/228 (4%)
Query: 5 AEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGT 64
A + +P + +AY CV L LL L LVF KFQVWRL+TNF F G
Sbjct: 7 AAEFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLVTNFLFFGP 66
Query: 65 FSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISL 124
+F +L + RY LE+G F RTADF++M +FG + + +L + +FLG +L
Sbjct: 67 LGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLL--GSLFFLGQAL 124
Query: 125 VFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYF 184
+ MLVYVWSR P ++N +GL+T +A +LPWA++ ++ G+ ++ DLLGI GH+YYF
Sbjct: 125 MAMLVYVWSRRSPRVRVNFFGLLTFQAPFLPWALMGFSLLLGNSILVDLLGIAVGHIYYF 184
Query: 185 LTVLHP-LATGKNLLKTPKWVQKLVARWRIGAPAINRAQ---PERTTG 228
L + P GK LL+TP +++ L + APA + PE G
Sbjct: 185 LEDVFPNQPGGKRLLQTPGFLKLL-----LDAPAEDPNYLPLPEEQPG 227
>sp|Q0P5E4|DERL3_BOVIN Derlin-3 OS=Bos taurus GN=DERL3 PE=2 SV=1
Length = 231
Score = 137 bits (344), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 85/205 (41%), Positives = 121/205 (59%), Gaps = 3/205 (1%)
Query: 5 AEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGT 64
A + +P + + Y CV L LL L LVF KFQVWRLITNF F G
Sbjct: 7 ATEFLQVPAVTRTYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLITNFLFFGP 66
Query: 65 FSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISL 124
+F +L + RY LE+G F RTADF++M +FG + + +L + +FLG +L
Sbjct: 67 LGFSFFFNMLFVFRYCRMLEEGSFRGRTADFVFMFLFGGVLMTLLGLL--GSLFFLGQAL 124
Query: 125 VFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYF 184
MLVYVWSR P ++N +GL+T +A +LPWA++ L ++ G+ ++ DLLGI GH+YYF
Sbjct: 125 TAMLVYVWSRRSPGVRVNFFGLLTFQAPFLPWALMGLPMLLGNSILVDLLGIAVGHVYYF 184
Query: 185 LTVLHP-LATGKNLLKTPKWVQKLV 208
L + P GK LL TP +++ L+
Sbjct: 185 LEDVFPNQPGGKRLLLTPSFLKLLL 209
>sp|Q9D8K3|DERL3_MOUSE Derlin-3 OS=Mus musculus GN=Derl3 PE=2 SV=1
Length = 228
Score = 134 bits (338), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 83/205 (40%), Positives = 119/205 (58%), Gaps = 3/205 (1%)
Query: 5 AEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGT 64
A + +P + +AY CV L LL L LVF KFQVWRLIT F F G
Sbjct: 7 AAGFLQVPAVTRAYTAACVLTTAAVQLELLSPFQLYFNPHLVFRKFQVWRLITTFLFFGP 66
Query: 65 FSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISL 124
F +L + RY LE+G F R ADF++M +FG + + +L + +FLG +L
Sbjct: 67 LGFGFFFNMLFVFRYCRMLEEGSFRGRKADFVFMFLFGGVLMTLLGFLGSL--FFLGQAL 124
Query: 125 VFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYF 184
+ MLVYVWSR P+ ++N +GL+ +A +LPWA++ ++ G+ +V DLLGI+ GH+YYF
Sbjct: 125 MAMLVYVWSRRSPHVRVNFFGLLNFQAPFLPWALMGFSLLLGNSVVTDLLGILVGHIYYF 184
Query: 185 LTVLHP-LATGKNLLKTPKWVQKLV 208
L + P GK LL TP ++ L+
Sbjct: 185 LEDVFPNQPGGKRLLLTPSVLKLLL 209
>sp|Q21997|DERL2_CAEEL Derlin-2 OS=Caenorhabditis elegans GN=der-2 PE=2 SV=2
Length = 237
Score = 130 bits (327), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 84/229 (36%), Positives = 126/229 (55%), Gaps = 12/229 (5%)
Query: 9 HSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTFSIN 68
+PP+ + Y CV + T L + L ++L+ K+Q WRLIT+F F G+F +
Sbjct: 9 EEMPPVTRFYTGACVLLTTAVHLEFVTPFHLYFNWELIIRKYQFWRLITSFCFFGSFGFS 68
Query: 69 FGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFML 128
F ++ RY + LE+G F R ADF++M +FGA+ L++LS I + + FLG + ML
Sbjct: 69 FLFNMIFTYRYCMMLEEGSFRGRRADFVYMFLFGAV-LMILSGIFV-QILFLGQAFTIML 126
Query: 129 VYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYFLTVL 188
VY+WSR P Q+N +G++T A YLPW +L ++ G+ V D +GI GH+Y+FL +
Sbjct: 127 VYIWSRRNPMIQMNFFGVLTFTAPYLPWVLLLFSLLLGNNAVVDFMGIACGHIYFFLEDV 186
Query: 189 HPLAT-GKNLLKTPKWV---------QKLVARWRIGAPAINRAQPERTT 227
P GK LKTP+W+ + L R G QPE+
Sbjct: 187 FPFQEHGKRFLKTPQWLVYLFDERRPEPLPEDERPGGFEWGDEQPEQEQ 235
>sp|Q54IC9|DERL1_DICDI Probable derlin-1 homolog OS=Dictyostelium discoideum GN=derl1 PE=3
SV=1
Length = 242
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 119/239 (49%), Gaps = 7/239 (2%)
Query: 1 MSSPAEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFF 60
M E+++S+PP+ + + + + + ++ L+ + L L++ F F +WRLIT
Sbjct: 1 MDGVKEWFNSIPPVSRYMFAIFLGIPVLAAMHLISFNYLYLDFTFTFKHFHLWRLITAPC 60
Query: 61 FLGTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFL 120
+ + F L+ +Y LE + ++ D+L+ +IF ++ ++ IF YFL
Sbjct: 61 IISSLGPMFLFNLIFFYQYTTRLESLNYAGKSDDYLFCIIFISICNIIFGL--IFEYYFL 118
Query: 121 GISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVI-FGSPLVPDLLGIIAG 179
G + L+Y++SR P N YG + K YLPW L + G P D L I++G
Sbjct: 119 GTMTIMSLIYIYSRMNPTGTSNFYGFFSFKTIYLPWVFLVAHFLQTGHPPYSDFLAIVSG 178
Query: 180 HLYYFLTVLHPLATG-KNLLKTPKWVQKLVARWRIGAPAINRAQPERTTGVAFRGRSYR 237
H++++LT ++P A G L+KTPK++ + + G N + + TG + Y
Sbjct: 179 HIFFYLTDIYPRANGVPALIKTPKFITNIFNK---GDRNPNNVRRDPRTGRPIQEGGYN 234
>sp|Q9VQ57|DERL1_DROME Derlin-1 OS=Drosophila melanogaster GN=Der-1 PE=2 SV=1
Length = 245
Score = 106 bits (264), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 117/232 (50%), Gaps = 16/232 (6%)
Query: 7 YYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFL---G 63
+Y SLP + + T V ++ +C ++ L L L+ VFSK Q+WR +T+ F
Sbjct: 6 WYRSLPRFTRYWLTATVVLSMLCRFDVIPLHWLHLDRSAVFSKLQLWRCMTSLFVFPISS 65
Query: 64 TFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIP--IFRSYFLG 121
+ +F I I +Y LEK + R AD+L+++I A VL+ I IF YFL
Sbjct: 66 NTAFHFLINCFFIVQYSSKLEKDQYSRSPADYLYLLIVSA----VLANIGGMIFNVYFLM 121
Query: 122 ISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHL 181
+LV + Y+W + + ++ + KA YLPW + A + IF L L+GI GH+
Sbjct: 122 DTLVLAITYIWCQLNKDVTVSFWFGTRFKAMYLPWVLAAFEFIFHFSLA-SLVGIFVGHV 180
Query: 182 YYFLTVLHPLATGKN-LLKTPKWVQKLVARWRIGA-----PAINRAQPERTT 227
YYF + G LL+TP+++++LV G P +RA P + T
Sbjct: 181 YYFFKFQYSQDLGGTPLLETPQFLKRLVPDVSGGFGGFGLPPESRAPPRQAT 232
>sp|Q9BUN8|DERL1_HUMAN Derlin-1 OS=Homo sapiens GN=DERL1 PE=1 SV=1
Length = 251
Score = 105 bits (263), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 129/255 (50%), Gaps = 20/255 (7%)
Query: 1 MSSPAEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFF 60
MS +++ S+P I + + VAV V LGL+ + L L + +FQ+WR IT F
Sbjct: 1 MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITATF 60
Query: 61 FLGTFSINFG------IRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPI 114
+ F + G + L + +Y LE G F+ R AD+L+M++F + +++
Sbjct: 61 Y---FPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMD 117
Query: 115 FRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLL 174
+ L I L+ ++YVW++ + ++ + KA YLPW +L + I G ++ +L+
Sbjct: 118 MQ--LLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELI 175
Query: 175 GIIAGHLYYFLTVLHPLA-TGKNLLKTPKWVQKLVARWRIGA------PAINRAQPERTT 227
G + GHLY+FL +P+ G+N L TP+++ + + R G PA R ++
Sbjct: 176 GNLVGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNG 235
Query: 228 GVAFR--GRSYRLSD 240
G G+ +RL D
Sbjct: 236 GGGRHNWGQGFRLGD 250
>sp|Q5R9W3|DERL1_PONAB Derlin-1 OS=Pongo abelii GN=DERL1 PE=2 SV=1
Length = 251
Score = 105 bits (262), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 128/255 (50%), Gaps = 20/255 (7%)
Query: 1 MSSPAEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFF 60
MS +++ S+P I + + VAV V LGL+ + L L + +FQ+WR IT F
Sbjct: 1 MSDIGDWFRSIPAITRYWFAATVAVPLVGKLGLISPAYLFLWPEAFLYRFQIWRPITATF 60
Query: 61 FLGTFSINFG------IRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPI 114
+ F + G + L + Y LE G F+ R AD+L+M++F + +++
Sbjct: 61 Y---FPVGPGTGFLYLVNLYFLYHYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMD 117
Query: 115 FRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLL 174
+ L I L+ ++YVW++ + ++ + KA YLPW +L + I G ++ +L+
Sbjct: 118 MQ--LLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELI 175
Query: 175 GIIAGHLYYFLTVLHPLA-TGKNLLKTPKWVQKLVARWRIGA------PAINRAQPERTT 227
G + GHLY+FL +P+ G+N L TP+++ + + R G PA R ++
Sbjct: 176 GNLVGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNG 235
Query: 228 GVAFR--GRSYRLSD 240
G G+ +RL D
Sbjct: 236 GGGRHNWGQGFRLGD 250
>sp|Q71SS4|DERL1_BOVIN Derlin-1 OS=Bos taurus GN=DERL1 PE=2 SV=1
Length = 251
Score = 104 bits (260), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 128/255 (50%), Gaps = 20/255 (7%)
Query: 1 MSSPAEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFF 60
MS +++ S+P I + + VAV V LGL+ + L + +FQ+WR IT F
Sbjct: 1 MSDIGDWFRSIPTITRYWFAATVAVPLVGKLGLISPAYFFLWPEAFLYRFQIWRPITATF 60
Query: 61 FLGTFSINFG------IRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPI 114
+ F + G + L + +Y LE G F+ R AD+L+M++F + +++
Sbjct: 61 Y---FPVGPGTGFLYLVNLYFLYQYSTRLETGAFDGRPADYLFMLLFNWICIVITGLAMD 117
Query: 115 FRSYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLL 174
+ L I L+ ++YVW++ + ++ + KA YLPW +L + I G ++ +L+
Sbjct: 118 MQ--LLMIPLIMSVLYVWAQLNRDMIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELI 175
Query: 175 GIIAGHLYYFLTVLHPLA-TGKNLLKTPKWVQKLVARWRIGA------PAINRAQPERTT 227
G + GHLY+FL +P+ G+N L TP+++ + + R G PA R ++
Sbjct: 176 GNLVGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNG 235
Query: 228 GVAFR--GRSYRLSD 240
G G+ +RL D
Sbjct: 236 GGGRHNWGQGFRLGD 250
>sp|Q99J56|DERL1_MOUSE Derlin-1 OS=Mus musculus GN=Derl1 PE=2 SV=1
Length = 251
Score = 101 bits (251), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 127/253 (50%), Gaps = 16/253 (6%)
Query: 1 MSSPAEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFF 60
MS +++ S+P I + + VAV + LG++ + L + +FQ+WR T F
Sbjct: 1 MSDIGDWFRSIPAITRYWFAATVAVPLIGKLGIISPAYFFLWPEAFLYRFQIWRPFTATF 60
Query: 61 FL----GTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFR 116
+ GT + + L + +Y LE G F+ R AD+L+M++F + +++ +
Sbjct: 61 YFPVGPGT-GFLYLVNLYFLYQYSTRLEAGAFDGRPADYLFMLLFNWICIVITGLAMDMQ 119
Query: 117 SYFLGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGI 176
L I L+ ++YVW++ + ++ + KA YLPW +L + I G ++ +L+G
Sbjct: 120 --LLMIPLIMSVLYVWAQLNRDLIVSFWFGTRFKACYLPWVILGFNYIIGGSVINELIGN 177
Query: 177 IAGHLYYFLTVLHPLA-TGKNLLKTPKWVQKLVARWRIGA------PAINRAQPERTTGV 229
+ GHLY+FL +P+ G+N L TP+++ + + R G PA R ++ G
Sbjct: 178 LVGHLYFFLMFRYPMDLGGRNFLSTPQFLYRWLPSRRGGVSGFGVPPASMRRAADQNGGG 237
Query: 230 AFR--GRSYRLSD 240
G+ +RL D
Sbjct: 238 GRHNWGQGFRLGD 250
>sp|Q93561|DERL1_CAEEL Derlin-1 OS=Caenorhabditis elegans GN=cup-2 PE=2 SV=1
Length = 245
Score = 77.4 bits (189), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 102/204 (50%), Gaps = 9/204 (4%)
Query: 10 SLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTFSINF 69
+P + + + + + G +++ + L++ LV +KFQ WR +T + +
Sbjct: 9 GIPIVTRYWFLASTIIPLLGRFGFINVQWMFLQWDLVVNKFQFWRPLTALIYY-PVTPQT 67
Query: 70 GIRLLMIA----RYGVNLEKGPFERRTADFLWMMIFGALSLLVLS-AIPIFRSYFLGISL 124
G LM+ Y LE + R+AD+L+M+IF L A+ I YFL +
Sbjct: 68 GFHWLMMCYFLYNYSKALESETYRGRSADYLFMLIFNWFFCSGLCMALDI---YFLLEPM 124
Query: 125 VFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLLGIIAGHLYYF 184
V ++YVW + ++ ++ + + A YLPW + + + +L+GI+ GH Y+F
Sbjct: 125 VISVLYVWCQVNKDTIVSFWFGMRFPARYLPWVLWGFNAVLRGGGTNELVGILVGHAYFF 184
Query: 185 LTVLHPLATGKNLLKTPKWVQKLV 208
+ + +P G +L+ TP+++ +L+
Sbjct: 185 VALKYPDEYGVDLISTPEFLHRLI 208
>sp|O94458|YFFH_SCHPO Uncharacterized derlin-like protein C1687.17c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC1687.17c PE=3 SV=2
Length = 190
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 98/189 (51%), Gaps = 17/189 (8%)
Query: 6 EYYHSLPPICK--AYGTLCVAVATVCSLGLL-DLSILALEYKLVFSKFQVWRLITNFFFL 62
E+ PP+ + GTL +A + G + DL I +KL +K + WR IT F ++
Sbjct: 6 EFISQTPPVTRYIVLGTLFTTLA--VNFGYVSDLKIF-FNWKLFLAKGEYWRAITTFLYV 62
Query: 63 GTFSINFGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLV---LSAIPIFRSYF 119
G F + + L + R+ LE+ +T FL ++ SLLV S +P SYF
Sbjct: 63 GPFGLELILYLSFLLRFMSMLERSSPPPQTQSFLKTVLIVWFSLLVTSYFSYMPFAASYF 122
Query: 120 LGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGS--PLVPDLLGII 177
F ++Y+WS + P +I+I GL +KA Y+PW M+ L + PL+ DL+ +
Sbjct: 123 -----SFTMLYIWSWKHPLYRISILGLFDVKAPYVPWVMVLLRWLRTGIFPLL-DLISAL 176
Query: 178 AGHLYYFLT 186
GH+Y+F+T
Sbjct: 177 IGHVYFFVT 185
>sp|Q12743|DFM1_YEAST DER1-like family member protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=DFM1 PE=1 SV=1
Length = 341
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 91/195 (46%), Gaps = 14/195 (7%)
Query: 4 PAEYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLG 63
P E++ ++PPI + TL + + V L L++ + L F K Q+WRL+T+ L
Sbjct: 23 PKEFWLNIPPITRTLFTLAIVMTIVGRLNLINPWYFIYVWNLTFKKVQIWRLLTSCVMLS 82
Query: 64 TFSINFGIRLLMIARYGVNLEKGPF-----ERR----TADFLWMMIFGALSLLVLSAIPI 114
+ ++ + L I LE+G F RR T D+ + + F L++ + I I
Sbjct: 83 SRAMPALMELYSIYDRSSQLERGHFGPGLSNRRGPMVTVDYAYYLCFCILAITTATTI-I 141
Query: 115 FRSYF---LGISLVFMLVYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGS-PLV 170
+ SY+ L + + Y WS + N QI YGL+ + Y P L + +F V
Sbjct: 142 YGSYYPVVLTSGFISCITYTWSIDNANVQIMFYGLIPVWGKYFPLIQLFISFVFNEGDFV 201
Query: 171 PDLLGIIAGHLYYFL 185
L+G G+LY L
Sbjct: 202 ISLIGFTTGYLYTCL 216
>sp|Q9Y7Y0|YGR8_SCHPO Uncharacterized derlin-like protein C365.08c OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC365.08c PE=3 SV=1
Length = 224
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 16/211 (7%)
Query: 11 LPPICK--AYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTFSIN 68
+PP+ + GT + T+C L L S+L L Y LV + Q +RL TN+ + GT +
Sbjct: 16 IPPVTRYILLGTAATTILTLCQL--LSPSMLVLHYPLVVRQKQWYRLFTNYLYAGT-GFD 72
Query: 69 FGIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFML 128
F + + +Y LE F R ++ ++ AL + S I S L SL +
Sbjct: 73 FIMNIYFFYQYSTYLENFVFARNAKKYIIYLVKVALLIDAFSLISGLGSA-LNQSLAAAI 131
Query: 129 VYVWSREFPNSQINIYGLVTLKAFYLPWAMLALDVIFGSPLVPDLL----GIIAGHLYYF 184
Y WS S+I ++ YLP+ +L + G +P L+ GII+ + F
Sbjct: 132 AYNWSLFNSFSKIQFLFGFHVQGKYLPYVLLGFSFLTGG--LPSLVVLGFGIISAMIVNF 189
Query: 185 LTVLH-PLATGKNLLKTPKWVQKLVARWRIG 214
+H P+ N +PK + V+ IG
Sbjct: 190 FDSIHTPVVHRSN---SPKLNSQKVSGTFIG 217
>sp|P38307|DER1_YEAST Degradation in the endoplasmic reticulum protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=DER1 PE=1
SV=3
Length = 211
Score = 39.3 bits (90), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 91/195 (46%), Gaps = 7/195 (3%)
Query: 10 SLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTFSINF 69
+P + + + C+ ++ + SL ++D + Y LVF K Q RL+ + F G F+
Sbjct: 11 DIPLVTRLWTIGCLVLSGLTSLRIVDPGKVVYSYDLVFKKGQYGRLLYSIFDYGAFNWIS 70
Query: 70 GIRLLMIARYGVNLEKGPFERRTADFLWMMIFGALSLLVLSAIPIFRSYFLGISLVFMLV 129
I + + A + LE RR F W++ + L+ +++I + LG+ L LV
Sbjct: 71 MINIFVSANHLSTLENSFNLRRK--FCWIIFLLLVILVKMTSIEQ-PAASLGVLLHENLV 127
Query: 130 YVWSREFPNSQINI--YGLVTLKAFYLPWAMLA-LDVIFGSPLVPDLLGIIAGHLYYFLT 186
Y ++ N Q+N+ +G + + P M A + ++ + + + GH+ Y++
Sbjct: 128 YYELKKNGN-QMNVRFFGAIDVSPSIFPIYMNAVMYFVYKRSWLEIAMNFMPGHVIYYMD 186
Query: 187 VLHPLATGKNLLKTP 201
+ G +L K+P
Sbjct: 187 DIIGKIYGIDLCKSP 201
>sp|P0C9U0|5056R_ASFP4 Protein MGF 505-6R OS=African swine fever virus (isolate Tick/South
Africa/Pretoriuskop Pr4/1996) GN=Pret-042 PE=3 SV=1
Length = 518
Score = 31.6 bits (70), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 18/79 (22%)
Query: 13 PICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITNFFFLGTFSINFGIR 72
PI + +A+ T D+ + +L YKL+F Q GTF + +R
Sbjct: 188 PIPEPEAIFSIAIVTK------DIELFSLGYKLIFDYMQRQ---------GTFQLTNMVR 232
Query: 73 LLMIARY-GVNLEKG--PF 88
+L++ RY G+ +EKG PF
Sbjct: 233 MLLLNRYIGMAIEKGLLPF 251
>sp|Q80TY5|VP13B_MOUSE Vacuolar protein sorting-associated protein 13B OS=Mus musculus
GN=Vps13b PE=1 SV=2
Length = 4013
Score = 30.8 bits (68), Expect = 8.3, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 6 EYYHSLPPICKAYGTLCVAVATVCSLGLLDLSILALEYKLVFSKFQVWRLITN 58
EY+ L + A+ ++ + VC L L D++++ + KLV S +WR++ N
Sbjct: 2374 EYWDELQKVFVAFQEFSLSESKVCELQLPDINLVHDQKKLVSS--DLWRIVLN 2424
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.144 0.458
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,025,030
Number of Sequences: 539616
Number of extensions: 3474984
Number of successful extensions: 9775
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 9705
Number of HSP's gapped (non-prelim): 52
length of query: 240
length of database: 191,569,459
effective HSP length: 114
effective length of query: 126
effective length of database: 130,053,235
effective search space: 16386707610
effective search space used: 16386707610
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 59 (27.3 bits)