BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 026289
(240 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1KQN|A Chain A, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Nad
pdb|1KQN|B Chain B, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Nad
pdb|1KQN|C Chain C, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Nad
pdb|1KQN|D Chain D, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Nad
pdb|1KQN|E Chain E, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Nad
pdb|1KQN|F Chain F, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Nad
pdb|1KQO|A Chain A, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Deamido-Nad
pdb|1KQO|B Chain B, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Deamido-Nad
pdb|1KQO|C Chain C, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Deamido-Nad
pdb|1KQO|D Chain D, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Deamido-Nad
pdb|1KQO|E Chain E, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Deamido-Nad
pdb|1KQO|F Chain F, Crystal Structure Of NmnNAMN ADENYLYLTRANSFERASE COMPLEXED
With Deamido-Nad
pdb|1KR2|A Chain A, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
Complexed With Tiazofurin Adenine Dinucleotide (Tad)
pdb|1KR2|B Chain B, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
Complexed With Tiazofurin Adenine Dinucleotide (Tad)
pdb|1KR2|C Chain C, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
Complexed With Tiazofurin Adenine Dinucleotide (Tad)
pdb|1KR2|D Chain D, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
Complexed With Tiazofurin Adenine Dinucleotide (Tad)
pdb|1KR2|E Chain E, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
Complexed With Tiazofurin Adenine Dinucleotide (Tad)
pdb|1KR2|F Chain F, Crystal Structure Of Human NmnNAMN ADENYLYL TRANSFERASE
Complexed With Tiazofurin Adenine Dinucleotide (Tad)
Length = 279
Score = 194 bits (493), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 146/249 (58%), Gaps = 33/249 (13%)
Query: 19 KTYVVLVATGSFNPPTFMHLRMFELARDTLNSEG-YCVIGGYMSPVNDAYKKRGLISAEH 77
KT VVL+A GSFNP T MHLR+FELA+D +N G Y V+ G +SPV DAYKK+GLI A H
Sbjct: 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYH 65
Query: 78 RINLCNLACKSSDFIMVDPWEANQSGYQRTLTVL------------------------SR 113
R+ + LA K+S ++ VD WE+ Q ++ TL VL R
Sbjct: 66 RVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGR 125
Query: 114 VKNFLIEAGLISTESL--------KVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVIC 165
+ + +SL KV L+CG+DLLESFA+P W E + I N+G+IC
Sbjct: 126 KRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLIC 185
Query: 166 IRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVI 225
+ R G D +K I ++++L K++ NI +V+E + N ISST+IR + RG SI+YL D V
Sbjct: 186 VTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPDLVQ 245
Query: 226 DYIRESRLY 234
+YI + LY
Sbjct: 246 EYIEKHNLY 254
>pdb|1KKU|A Chain A, Crystal Structure Of Nuclear Human Nicotinamide
Mononucleotide Adenylyltransferase
Length = 279
Score = 192 bits (489), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/249 (42%), Positives = 145/249 (58%), Gaps = 33/249 (13%)
Query: 19 KTYVVLVATGSFNPPTFMHLRMFELARDTLNSEG-YCVIGGYMSPVNDAYKKRGLISAEH 77
KT VVL+A GSFNP T MHLR+FELA+D +N G Y V+ G +SPV DAYKK+GLI A H
Sbjct: 6 KTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYH 65
Query: 78 RINLCNLACKSSDFIMVDPWEANQSGYQRTLTVL------------------------SR 113
R+ + LA K+S ++ VD WE+ Q ++ TL VL R
Sbjct: 66 RVIMAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGR 125
Query: 114 VKNFLIEAGLISTESL--------KVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVIC 165
+ + +SL KV L+CG+DLLESFA+P W E + I N+G+IC
Sbjct: 126 KRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVANYGLIC 185
Query: 166 IRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVI 225
+ R G D +K I ++++L K++ NI +V+E N ISST+IR + RG SI+YL D V
Sbjct: 186 VTRAGNDAQKFIYESDVLWKHRSNIHVVNEWFANDISSTKIRRALRRGQSIRYLVPDLVQ 245
Query: 226 DYIRESRLY 234
+YI + LY
Sbjct: 246 EYIEKHNLY 254
>pdb|1GZU|A Chain A, Crystal Structure Of Human Nicotinamide Mononucleotide
Adenylyltransferase In Complex With Nmn
pdb|1GZU|B Chain B, Crystal Structure Of Human Nicotinamide Mononucleotide
Adenylyltransferase In Complex With Nmn
pdb|1GZU|C Chain C, Crystal Structure Of Human Nicotinamide Mononucleotide
Adenylyltransferase In Complex With Nmn
Length = 290
Score = 189 bits (481), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 106/254 (41%), Positives = 145/254 (57%), Gaps = 33/254 (12%)
Query: 14 SKTQGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEG-YCVIGGYMSPVNDAYKKRGL 72
S+ KT VVL+A GSFNP T HLR+FELA+D N G Y V+ G +SPV DAYKK+GL
Sbjct: 12 SENSEKTEVVLLACGSFNPITNXHLRLFELAKDYXNGTGRYTVVKGIISPVGDAYKKKGL 71
Query: 73 ISAEHRINLCNLACKSSDFIMVDPWEANQSGYQRTLTVL--------------------- 111
I A HR+ LA K+S ++ VD WE+ Q ++ TL VL
Sbjct: 72 IPAYHRVIXAELATKNSKWVEVDTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTL 131
Query: 112 ---SRVKNFLIEAGLISTESL--------KVMLVCGSDLLESFAIPGFWMPEQVWTICRN 160
R + + +SL KV L+CG+DLLESFA+P W E + I N
Sbjct: 132 ERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLESFAVPNLWKSEDITQIVAN 191
Query: 161 FGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLT 220
+G+IC+ R G D +K I ++++L K++ NI +V+E + N ISST+IR + RG SI+YL
Sbjct: 192 YGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLV 251
Query: 221 EDKVIDYIRESRLY 234
D V +YI + LY
Sbjct: 252 PDLVQEYIEKHNLY 265
>pdb|1NUP|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complex With Nmn
pdb|1NUP|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complex With Nmn
pdb|1NUQ|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Naad
pdb|1NUQ|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Naad
pdb|1NUR|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE
pdb|1NUR|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE
pdb|1NUS|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Atp Analog And Nmn
pdb|1NUS|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Atp Analog And Nmn
pdb|1NUT|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Atp Analog
pdb|1NUT|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Atp Analog
pdb|1NUU|A Chain A, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Nad
pdb|1NUU|B Chain B, Crystal Structure Of Human Cytosolic NmnNAMN
ADENYLYLTRANSFERASE Complexed With Nad
Length = 252
Score = 182 bits (461), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/227 (41%), Positives = 138/227 (60%), Gaps = 14/227 (6%)
Query: 22 VVLVATGSFNPPTFMHLRMFELARDTLNSEG-YCVIGGYMSPVNDAYKKRGLISAEHRIN 80
VVL+A GSFNP T MHLRMFE+ARD L+ G Y VI G +SPVND Y K+ L ++ HR+
Sbjct: 7 VVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVA 66
Query: 81 LCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEA-----------GLISTESL 129
+ LA ++SD+I VDPWE+ Q+ + T+ VL + L+ + L ST +
Sbjct: 67 MARLALQTSDWIRVDPWESEQAQWMETVKVLRHHHSKLLRSPPQMEGPDHGKALFSTPAA 126
Query: 130 --KVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNK 187
++ L+CG+D+L++F P W + I FG++C+ R D + I+++ IL ++
Sbjct: 127 VPELKLLCGADVLKTFQTPNLWKDAHIQEIVEKFGLVCVGRVSHDPKGYIAESPILRMHQ 186
Query: 188 GNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLY 234
NI L E V N+IS+T IR + +G S+KYL D VI YI++ LY
Sbjct: 187 HNIHLAKEPVQNEISATYIRRALGQGQSVKYLIPDAVITYIKDHGLY 233
>pdb|1YUM|A Chain A, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Pseudomonas Aeruginosa
pdb|1YUM|B Chain B, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Pseudomonas Aeruginosa
pdb|1YUM|C Chain C, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Pseudomonas Aeruginosa
pdb|1YUM|D Chain D, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Pseudomonas Aeruginosa
pdb|1YUN|A Chain A, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Pseudomonas Aeruginosa
pdb|1YUN|B Chain B, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Pseudomonas Aeruginosa
Length = 242
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 32/220 (14%)
Query: 28 GSFNPPTFMHLR-MFELARDTLNSEGYCVIGGYMSP-VNDAYKKRGLISAEHRINLCNLA 85
G+F+P H+R E+A E + + + P +++ +SA R+ + A
Sbjct: 30 GTFDPVHIGHMRSAVEMA------EQFALDELRLLPNARPPHRETPQVSAAQRLAMVERA 83
Query: 86 CKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAI 145
+ + VDP E + T+ L V+ A L + + L ++ G D +
Sbjct: 84 VAGVERLTVDPRELQRDKPSYTIDTLESVR-----AELAADDQL--FMLIGWDAF--CGL 134
Query: 146 PGFWMPEQVWTICRNFGVICIRREGQDVE-----------KIISDNEILDKNKGNIKLVD 194
P + E + C ++ ++R D E + ++D + L G I V
Sbjct: 135 PTWHRWEALLDHCH---IVVLQRPDADSEPPESLRDLLAARSVADPQALKGPGGQITFVW 191
Query: 195 ELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLY 234
+ P +S+T+IR + G S+++L D V++YI LY
Sbjct: 192 Q-TPLAVSATQIRALLGAGRSVRFLVPDAVLNYIEAHHLY 230
>pdb|1KAM|A Chain A, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAM|B Chain B, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAM|C Chain C, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAM|D Chain D, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAQ|A Chain A, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAQ|B Chain B, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAQ|C Chain C, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAQ|D Chain D, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAQ|E Chain E, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
pdb|1KAQ|F Chain F, Structure Of Bacillus Subtilis Nicotinic Acid
Mononucleotide Adenylyl Transferase
Length = 194
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 90/218 (41%), Gaps = 30/218 (13%)
Query: 18 GKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEH 77
G + + + G+F+PP HL M A + L G I + + + + H
Sbjct: 4 GGSKKIGIFGGTFDPPHNGHLLM---ANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFH 60
Query: 78 RINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGS 137
R+ + LA +S+ ++ E + G T +S +K + ++ + G+
Sbjct: 61 RVEMLKLAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQ--------RYPNDQLFFIIGA 112
Query: 138 DLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELV 197
D++E +P ++ +++ + + GV +R G VE L+ V
Sbjct: 113 DMIE--YLPKWYKLDELLNLIQFIGV---KRPGFHVET-------------PYPLLFADV 154
Query: 198 PN-QISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLY 234
P ++SST IR+ YL DKV Y+ E+ LY
Sbjct: 155 PEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLY 192
>pdb|1YUL|A Chain A, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Pseudomonas Aeruginosa
Length = 242
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/183 (22%), Positives = 76/183 (41%), Gaps = 32/183 (17%)
Query: 67 YKKRGLISAEHRINLCNLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLIST 126
+++ +SA R+ A + + VDP E + T+ L V+ A L +
Sbjct: 65 HRETPQVSAAQRLAXVERAVAGVERLTVDPRELQRDKPSYTIDTLESVR-----AELAAD 119
Query: 127 ESLKVML----VCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVE-------- 174
+ L ++ CG +P + E + C ++ ++R D E
Sbjct: 120 DQLFXLIGWDAFCG--------LPTWHRWEALLDHCH---IVVLQRPDADSEPPESLRDL 168
Query: 175 ---KIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRES 231
+ ++D + L G I V + P +S+T+IR + G S+++L D V++YI
Sbjct: 169 LAARSVADPQALKGPGGQITFVWQ-TPLAVSATQIRALLGAGRSVRFLVPDAVLNYIEAH 227
Query: 232 RLY 234
LY
Sbjct: 228 HLY 230
>pdb|2H2A|A Chain A, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Staphylococcus Aureus: Product
Bound Form 2
pdb|2H2A|B Chain B, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Staphylococcus Aureus: Product
Bound Form 2
Length = 189
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 75/212 (35%), Gaps = 28/212 (13%)
Query: 23 VLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLC 82
+++ G FNP H+ + L + + + +MSP+ K I +HR+ +
Sbjct: 4 IVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLK---KHHDFIDVQHRLTMI 60
Query: 83 NLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLES 142
+ F + E + G T + K + ++ V G+D
Sbjct: 61 QMIIDELGFGDIXDDEIKRGGQSYTYDTIKAFKE--------QHKDSELYFVIGTDQYNQ 112
Query: 143 FAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQIS 202
W + F V+ + Q+VE N + ++ IS
Sbjct: 113 LEK---WYQIEYLKEMVTFVVVNRDKNSQNVE--------------NAMIAIQIPRVDIS 155
Query: 203 STRIRDCICRGLSIKYLTEDKVIDYIRESRLY 234
ST IR + G SI+ L V +YI+ LY
Sbjct: 156 STMIRQRVSEGKSIQVLVPKSVENYIKGEGLY 187
>pdb|2H29|A Chain A, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Staphylococcus Aureus: Product
Bound Form 1
pdb|2H29|B Chain B, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Staphylococcus Aureus: Product
Bound Form 1
Length = 189
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 75/212 (35%), Gaps = 28/212 (13%)
Query: 23 VLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLC 82
+++ G FNP H+ + L + + + +MSP+ K I +HR+ +
Sbjct: 4 IVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLK---KHHDFIDVQHRLTMI 60
Query: 83 NLACKSSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLES 142
+ F + E + G T + K + ++ V G+D
Sbjct: 61 QMIIDELGFGDICDDEIKRGGQSYTYDTIKAFKE--------QHKDSELYFVIGTDQYNQ 112
Query: 143 FAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQIS 202
W + F V+ + Q+VE N + ++ IS
Sbjct: 113 LEK---WYQIEYLKEMVTFVVVNRDKNSQNVE--------------NAMIAIQIPRVDIS 155
Query: 203 STRIRDCICRGLSIKYLTEDKVIDYIRESRLY 234
ST IR + G SI+ L V +YI+ LY
Sbjct: 156 STMIRQRVSEGKSIQVLVPKSVENYIKGEGLY 187
>pdb|3DV2|A Chain A, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Bacillus Anthracis
pdb|3DV2|B Chain B, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Bacillus Anthracis
pdb|3DV2|C Chain C, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Bacillus Anthracis
pdb|3DV2|D Chain D, Crystal Structure Of Nicotinic Acid Mononucleotide
Adenylyltransferase From Bacillus Anthracis
Length = 201
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 30/208 (14%)
Query: 28 GSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACK 87
G+F+PP + HL + LN E + + P R + S E R+ + LA +
Sbjct: 9 GTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQG---RNITSVESRLQMLELATE 65
Query: 88 SSDFIMVDPWEANQSGYQRTL-TVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIP 146
+ + + E ++ G T T+L K + ++ + G D++E +P
Sbjct: 66 AEEHFSICLEELSRKGPSYTYDTMLQLTKKY---------PDVQFHFIIGGDMVEY--LP 114
Query: 147 GFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRI 206
++ E + + GV R G + + E+ +SS+ +
Sbjct: 115 KWYNIEALLDLVTFVGVA---RPGYKLRTPYPITTV------------EIPEFAVSSSLL 159
Query: 207 RDCICRGLSIKYLTEDKVIDYIRESRLY 234
R+ + KYL +KV YI + LY
Sbjct: 160 RERYKEKKTCKYLLPEKVQVYIERNGLY 187
>pdb|2QTR|A Chain A, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
pdb|2QTR|B Chain B, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
pdb|2QTR|C Chain C, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
Length = 189
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 30/208 (14%)
Query: 28 GSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACK 87
G+F+PP + HL + LN E + + P R + S E R+ + LA +
Sbjct: 9 GTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQG---RNITSVESRLQMLELATE 65
Query: 88 SSDFIMVDPWEANQSGYQRTL-TVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIP 146
+ + + E ++ G T T+L K + ++ + G D++E +P
Sbjct: 66 AEEHFSICLEELSRKGPSYTYDTMLQLTKKY---------PDVQFHFIIGGDMVE--YLP 114
Query: 147 GFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRI 206
++ E + + GV R G + + E+ +SS+ +
Sbjct: 115 KWYNIEALLDLVTFVGVA---RPGYKLRTPYPITTV------------EIPEFAVSSSLL 159
Query: 207 RDCICRGLSIKYLTEDKVIDYIRESRLY 234
R+ + KYL +KV YI + LY
Sbjct: 160 RERYKEKKTCKYLLPEKVQVYIERNGLY 187
>pdb|3HFJ|A Chain A, Bacillus Anthracis Nicotinate Mononucleotide
Adenylytransferase (Nadd) In Complex With Inhibitor Cid
3289443
pdb|3HFJ|B Chain B, Bacillus Anthracis Nicotinate Mononucleotide
Adenylytransferase (Nadd) In Complex With Inhibitor Cid
3289443
pdb|3MLA|A Chain A, Banadd In Complex With Inhibitor 1_02
pdb|3MLA|B Chain B, Banadd In Complex With Inhibitor 1_02
pdb|3MLB|A Chain A, Banadd In Complex With Inhibitor 1_02_1
pdb|3MLB|B Chain B, Banadd In Complex With Inhibitor 1_02_1
pdb|3MMX|A Chain A, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|B Chain B, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|C Chain C, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|D Chain D, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|E Chain E, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|F Chain F, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|G Chain G, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
pdb|3MMX|H Chain H, Bacillus Anthracis Nadd (Banadd) In Complex With Compound
1_02_3
Length = 191
Score = 35.4 bits (80), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 30/208 (14%)
Query: 28 GSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACK 87
G+F+PP + HL + LN E + + P R + S E R+ + LA +
Sbjct: 11 GTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQG---RNITSVESRLQMLELATE 67
Query: 88 SSDFIMVDPWEANQSGYQRTL-TVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIP 146
+ + + E ++ G T T+L K + ++ + G D++E +P
Sbjct: 68 AEEHFSICLEELSRKGPSYTYDTMLQLTKKY---------PDVQFHFIIGGDMVEY--LP 116
Query: 147 GFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRI 206
++ E + + GV R G + + E+ +SS+ +
Sbjct: 117 KWYNIEALLDLVTFVGVA---RPGYKLRTPYPITTV------------EIPEFAVSSSLL 161
Query: 207 RDCICRGLSIKYLTEDKVIDYIRESRLY 234
R+ + KYL +KV YI + LY
Sbjct: 162 RERYKEKKTCKYLLPEKVQVYIERNGLY 189
>pdb|3F3M|A Chain A, Six Crystal Structures Of Two Phosphopantetheine
Adenylyltransferases Reveal An Alternative Ligand
Binding Mode And An Associated Structural Change
Length = 168
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 45/111 (40%), Gaps = 14/111 (12%)
Query: 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRIN 80
+ + V GSF+P T+ HL + E + D + CV+ KK G S E R++
Sbjct: 3 HTIAVIPGSFDPITYGHLDIIERSTDRFDEIHVCVLKN--------SKKEGTFSLEERMD 54
Query: 81 LCNLACKSSDFIMVDPWEA------NQSGYQRTLTVLSRVKNFLIEAGLIS 125
L + K + V + Q G + + L V +F E L S
Sbjct: 55 LIEQSVKHLPNVKVHQFSGLLVDYCEQVGAKTIIRGLRAVSDFEYELRLTS 105
>pdb|2QTM|A Chain A, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
pdb|2QTM|B Chain B, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
pdb|2QTN|A Chain A, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
pdb|2QTN|B Chain B, Crystal Structure Of Nicotinate Mononucleotide
Adenylyltransferase
pdb|3E27|A Chain A, Nicotinic Acid Mononucleotide (Namn) Adenylyltransferase
From Bacillus Anthracis: Product Complex
pdb|3E27|B Chain B, Nicotinic Acid Mononucleotide (Namn) Adenylyltransferase
From Bacillus Anthracis: Product Complex
pdb|3E27|C Chain C, Nicotinic Acid Mononucleotide (Namn) Adenylyltransferase
From Bacillus Anthracis: Product Complex
pdb|3E27|D Chain D, Nicotinic Acid Mononucleotide (Namn) Adenylyltransferase
From Bacillus Anthracis: Product Complex
Length = 189
Score = 35.4 bits (80), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 81/208 (38%), Gaps = 30/208 (14%)
Query: 28 GSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACK 87
G+F+PP + HL + LN E + + P R + S E R+ + LA +
Sbjct: 9 GTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQG---RDITSVESRLQMLELATE 65
Query: 88 SSDFIMVDPWEANQSGYQRTL-TVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIP 146
+ + + E ++ G T T+L K + ++ + G D++E +P
Sbjct: 66 AEEHFSICLEELSRKGPSYTYDTMLQLTKKY---------PDVQFHFIIGGDMVE--YLP 114
Query: 147 GFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRI 206
++ E + + GV R G + + E+ +SS+ +
Sbjct: 115 KWYNIEALLDLVTFVGVA---RPGYKLRTPYPITTV------------EIPEFAVSSSLL 159
Query: 207 RDCICRGLSIKYLTEDKVIDYIRESRLY 234
R+ + KYL +KV YI + LY
Sbjct: 160 RERYKEKKTCKYLLPEKVQVYIERNGLY 187
>pdb|1K4K|A Chain A, Crystal Structure Of E. Coli Nicotinic Acid Mononucleotide
Adenylyltransferase
pdb|1K4K|B Chain B, Crystal Structure Of E. Coli Nicotinic Acid Mononucleotide
Adenylyltransferase
pdb|1K4K|C Chain C, Crystal Structure Of E. Coli Nicotinic Acid Mononucleotide
Adenylyltransferase
pdb|1K4K|D Chain D, Crystal Structure Of E. Coli Nicotinic Acid Mononucleotide
Adenylyltransferase
pdb|1K4M|A Chain A, Crystal Structure Of E.Coli Nicotinic Acid Mononucleotide
Adenylyltransferase Complexed To Deamido-Nad
pdb|1K4M|B Chain B, Crystal Structure Of E.Coli Nicotinic Acid Mononucleotide
Adenylyltransferase Complexed To Deamido-Nad
pdb|1K4M|C Chain C, Crystal Structure Of E.Coli Nicotinic Acid Mononucleotide
Adenylyltransferase Complexed To Deamido-Nad
Length = 213
Score = 34.7 bits (78), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 30/220 (13%)
Query: 28 GSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACK 87
G+F+P + HL+ E + + +I + P ++ + ++ R ++ LA
Sbjct: 10 GTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPP----HRPQPEANSVQRKHMLELAIA 65
Query: 88 SSDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPG 147
+D E ++ T L K + E G + + + G D L +F P
Sbjct: 66 DKPLFTLDERELKRNAPSYTAQTL---KEWRQEQG----PDVPLAFIIGQDSLLTF--PT 116
Query: 148 FWMPEQVWTICRNFGVICIRREGQDVE------------KIISDNEILD-KNKGNIKLVD 194
++ E TI N +I RR G +E + + E L + G I L +
Sbjct: 117 WYEYE---TILDNAHLIVCRRPGYPLEMAQPQYQQWLEDHLTHNPEDLHLQPAGKIYLAE 173
Query: 195 ELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLY 234
N IS+T IR+ + G S + L + V+ YI + LY
Sbjct: 174 TPWFN-ISATIIRERLQNGESCEDLLPEPVLTYINQQGLY 212
>pdb|2V6Z|M Chain M, Solution Structure Of Amino Terminal Domain Of Human Dna
Polymerase Epsilon Subunit B
Length = 99
Score = 28.5 bits (62), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
Query: 184 DKNKGNIKLVDELVPNQI-----SSTRIRDCICRGLSIKYLTE 221
D N + +L ++ P ++ S+ ++R + RG +IKYLTE
Sbjct: 13 DPNSSSARLQVDMAPERLRSRALSAFKLRGLLLRGEAIKYLTE 55
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 38/94 (40%), Gaps = 9/94 (9%)
Query: 102 SGYQRTLTVLSRVKNF-LIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRN 160
SG R L R +F LI + + L + L E A FW + C N
Sbjct: 73 SGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHN 132
Query: 161 FGVICIRREGQDVEKIISDNEILDKNKGNIKLVD 194
GV+ I +N ++D N+G +KL+D
Sbjct: 133 CGVLH--------RDIKDENILIDLNRGELKLID 158
>pdb|1B25|A Chain A, Formaldehyde Ferredoxin Oxidoreductase From Pyrococcus
Furiosus
pdb|1B25|B Chain B, Formaldehyde Ferredoxin Oxidoreductase From Pyrococcus
Furiosus
pdb|1B25|C Chain C, Formaldehyde Ferredoxin Oxidoreductase From Pyrococcus
Furiosus
pdb|1B25|D Chain D, Formaldehyde Ferredoxin Oxidoreductase From Pyrococcus
Furiosus
pdb|1B4N|A Chain A, Formaldehyde Ferredoxin Oxidoreductase From Pyrococcus
Furiosus, Complexed With Glutarate
pdb|1B4N|B Chain B, Formaldehyde Ferredoxin Oxidoreductase From Pyrococcus
Furiosus, Complexed With Glutarate
pdb|1B4N|C Chain C, Formaldehyde Ferredoxin Oxidoreductase From Pyrococcus
Furiosus, Complexed With Glutarate
pdb|1B4N|D Chain D, Formaldehyde Ferredoxin Oxidoreductase From Pyrococcus
Furiosus, Complexed With Glutarate
Length = 619
Score = 27.3 bits (59), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 30/60 (50%)
Query: 162 GVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTE 221
G + + EGQ+ E + +L N G KL + V N+I+ D I G+SI ++ E
Sbjct: 292 GNVVLDAEGQESELDYENVALLGSNLGIGKLNEVSVLNRIADEMGMDTISLGVSIAHVME 351
>pdb|1I0E|A Chain A, Crystal Structure Of Creatine Kinase From Human Muscle
pdb|1I0E|B Chain B, Crystal Structure Of Creatine Kinase From Human Muscle
pdb|1I0E|C Chain C, Crystal Structure Of Creatine Kinase From Human Muscle
pdb|1I0E|D Chain D, Crystal Structure Of Creatine Kinase From Human Muscle
Length = 381
Score = 26.9 bits (58), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 178 SDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLT 220
+D D N N+K D+L PN + S+R+R G SIK T
Sbjct: 103 TDKHKTDLNHENLKGGDDLDPNYVLSSRVR----TGRSIKGYT 141
>pdb|1VRP|A Chain A, The 2.1 Structure Of T. Californica Creatine Kinase
Complexed With The Transition-State Analogue Complex,
Adp- Mg 2+ NO3-CREATINE
pdb|1VRP|B Chain B, The 2.1 Structure Of T. Californica Creatine Kinase
Complexed With The Transition-State Analogue Complex,
Adp- Mg 2+ NO3-CREATINE
Length = 381
Score = 26.9 bits (58), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 4/40 (10%)
Query: 178 SDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIK 217
+D D N+ N+K D+L PN + S+R+R G SIK
Sbjct: 103 TDKHKTDLNQENLKGGDDLDPNYVLSSRVR----TGRSIK 138
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.137 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,941,186
Number of Sequences: 62578
Number of extensions: 275232
Number of successful extensions: 814
Number of sequences better than 100.0: 52
Number of HSP's better than 100.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 786
Number of HSP's gapped (non-prelim): 55
length of query: 240
length of database: 14,973,337
effective HSP length: 96
effective length of query: 144
effective length of database: 8,965,849
effective search space: 1291082256
effective search space used: 1291082256
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.9 bits)