Query 026289
Match_columns 240
No_of_seqs 181 out of 1201
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 10:01:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026289.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/026289hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nup_A FKSG76; NAD biosynthesi 100.0 1E-50 3.5E-55 346.4 23.8 220 18-237 3-236 (252)
2 1kqn_A Nmnat, nicotinamide mon 100.0 2.5E-50 8.5E-55 348.2 20.9 221 16-236 3-256 (279)
3 3h05_A Uncharacterized protein 100.0 1.1E-47 3.6E-52 311.1 11.7 168 21-238 2-174 (177)
4 1yum_A 'probable nicotinate-nu 100.0 2.4E-45 8.1E-50 311.3 20.5 199 20-237 22-233 (242)
5 2h29_A Probable nicotinate-nuc 100.0 8.1E-45 2.8E-49 297.3 15.4 185 21-235 2-188 (189)
6 1k4m_A NAMN adenylyltransferas 100.0 4.8E-44 1.6E-48 298.0 19.2 195 23-235 4-213 (213)
7 1kam_A Deamido-NAD(+), nicotin 100.0 2.1E-42 7.3E-47 284.1 20.0 185 21-235 7-193 (194)
8 2qtr_A Nicotinate (nicotinamid 100.0 9.2E-43 3.2E-47 284.7 17.4 185 21-235 2-188 (189)
9 3nd5_A Phosphopantetheine aden 100.0 2.8E-33 9.6E-38 225.0 12.6 161 21-236 2-163 (171)
10 3f3m_A Phosphopantetheine aden 100.0 6.6E-32 2.3E-36 216.4 13.3 155 21-231 3-158 (168)
11 1o6b_A Phosphopantetheine aden 100.0 9.4E-32 3.2E-36 215.9 9.3 162 21-237 2-163 (169)
12 1vlh_A Phosphopantetheine aden 100.0 4.1E-31 1.4E-35 213.2 8.2 156 22-232 13-168 (173)
13 3nbk_A Phosphopantetheine aden 100.0 8.4E-30 2.9E-34 204.9 12.4 158 18-231 18-175 (177)
14 1qjc_A Phosphopantetheine aden 100.0 4.6E-30 1.6E-34 203.5 9.0 155 21-231 1-156 (158)
15 1od6_A PPAT, phosphopantethein 100.0 3E-29 1E-33 199.3 9.7 152 24-231 3-157 (160)
16 4f3r_A Phosphopantetheine aden 99.9 8.6E-28 2.9E-32 191.5 10.8 155 21-231 5-159 (162)
17 1ej2_A Nicotinamide mononucleo 99.9 7.1E-28 2.4E-32 195.5 7.7 157 22-235 4-164 (181)
18 3k9w_A Phosphopantetheine aden 99.9 9.7E-27 3.3E-31 189.3 13.8 167 9-231 11-177 (187)
19 1f9a_A Hypothetical protein MJ 99.9 5E-27 1.7E-31 188.3 10.4 152 23-235 2-158 (168)
20 3nv7_A Phosphopantetheine aden 99.9 1.7E-26 5.9E-31 182.9 5.1 155 21-230 2-156 (157)
21 1jhd_A Sulfate adenylyltransfe 99.9 4.2E-25 1.5E-29 197.9 12.0 176 20-231 193-390 (396)
22 2qjo_A Bifunctional NMN adenyl 99.9 9.5E-25 3.2E-29 192.4 10.2 161 19-233 5-173 (341)
23 1v47_A ATP sulfurylase; produc 99.9 3.1E-24 1E-28 189.7 12.6 174 20-231 156-348 (349)
24 2qjt_B Nicotinamide-nucleotide 99.9 3.6E-22 1.2E-26 176.8 11.2 160 21-231 7-176 (352)
25 2b7l_A Glycerol-3-phosphate cy 99.8 1E-18 3.4E-23 134.3 7.6 95 21-139 1-95 (132)
26 1coz_A Protein (glycerol-3-pho 99.7 2.4E-18 8.2E-23 131.6 7.3 95 21-139 1-95 (129)
27 1lw7_A Transcriptional regulat 99.7 4.6E-18 1.6E-22 151.5 6.1 73 21-100 2-84 (365)
28 3do8_A Phosphopantetheine aden 99.5 4.3E-15 1.5E-19 116.3 3.9 70 23-98 2-76 (148)
29 3glv_A Lipopolysaccharide core 99.4 7.8E-14 2.7E-18 108.5 5.5 67 21-94 2-71 (143)
30 3hl4_A Choline-phosphate cytid 99.4 1.8E-12 6E-17 107.9 9.7 73 16-94 71-147 (236)
31 1r6x_A ATP:sulfate adenylyltra 99.2 1.5E-10 5.2E-15 103.3 14.1 172 20-230 188-385 (395)
32 1g8f_A Sulfate adenylyltransfe 99.1 7.4E-10 2.5E-14 102.5 12.9 172 20-230 189-386 (511)
33 3gmi_A UPF0348 protein MJ0951; 99.0 2.3E-09 7.8E-14 94.8 13.4 182 22-231 53-259 (357)
34 2x0k_A Riboflavin biosynthesis 99.0 4.6E-10 1.6E-14 98.8 8.0 74 23-98 17-95 (338)
35 3elb_A Ethanolamine-phosphate 99.0 2.2E-09 7.6E-14 94.4 9.9 67 19-93 5-75 (341)
36 3elb_A Ethanolamine-phosphate 98.9 8E-10 2.7E-14 97.2 6.3 140 17-214 194-338 (341)
37 3op1_A Macrolide-efflux protei 98.9 2.5E-08 8.5E-13 86.5 15.4 73 23-97 22-101 (308)
38 1mrz_A Riboflavin kinase/FMN a 98.9 1.2E-09 4.2E-14 94.3 6.5 58 25-85 3-66 (293)
39 2gks_A Bifunctional SAT/APS ki 98.1 2.8E-05 9.5E-10 72.5 13.4 176 20-230 164-363 (546)
40 1m8p_A Sulfate adenylyltransfe 97.9 0.00022 7.6E-09 66.8 14.1 180 20-231 191-388 (573)
41 1x6v_B Bifunctional 3'-phospho 97.6 0.0018 6.1E-08 61.2 15.9 179 20-230 413-616 (630)
42 3cr8_A Sulfate adenylyltranfer 97.3 0.0022 7.7E-08 59.7 12.0 180 20-230 164-360 (552)
43 2ejc_A Pantoate--beta-alanine 96.8 0.0016 5.6E-08 55.4 5.5 61 21-85 22-85 (280)
44 3ag6_A Pantothenate synthetase 92.8 0.23 7.9E-06 42.1 6.6 58 22-85 24-86 (283)
45 1v8f_A Pantoate-beta-alanine l 91.7 0.41 1.4E-05 40.4 6.8 54 26-85 24-80 (276)
46 3cov_A Pantothenate synthetase 90.5 0.32 1.1E-05 41.6 5.0 50 33-85 44-97 (301)
47 3inn_A Pantothenate synthetase 89.9 0.76 2.6E-05 39.4 6.8 60 20-85 42-106 (314)
48 3q12_A Pantoate--beta-alanine 87.3 0.9 3.1E-05 38.5 5.5 60 20-85 24-88 (287)
49 3uk2_A Pantothenate synthetase 82.2 1.3 4.6E-05 37.3 4.3 60 22-85 23-85 (283)
50 3n8h_A Pantothenate synthetase 78.6 2.2 7.5E-05 35.6 4.4 62 20-85 23-87 (264)
51 3mxt_A Pantothenate synthetase 75.9 3.2 0.00011 35.1 4.7 59 20-85 24-87 (285)
52 3en0_A Cyanophycinase; serine 50.2 33 0.0011 28.8 6.2 113 20-159 26-138 (291)
53 1yoe_A Hypothetical protein YB 39.5 10 0.00035 32.4 1.4 27 6-32 137-167 (322)
54 1v31_A Hypothetical protein RA 37.6 8.6 0.00029 26.6 0.5 22 216-237 28-49 (93)
55 2c40_A Inosine-uridine preferr 37.5 11 0.00039 31.8 1.3 26 6-31 127-156 (312)
56 2a33_A Hypothetical protein; s 37.3 48 0.0016 26.4 5.0 38 19-56 12-49 (215)
57 1q8f_A Pyrimidine nucleoside h 35.7 13 0.00044 31.6 1.4 27 6-32 126-156 (313)
58 2mas_A Inosine-uridine nucleos 35.7 9.8 0.00033 32.3 0.6 27 6-32 127-157 (314)
59 1xou_A ESPA; coiled coil, heli 35.3 7.9 0.00027 30.2 0.0 19 216-234 99-119 (192)
60 3t8i_A Purine nucleosidase, (I 35.1 14 0.00047 31.4 1.5 27 6-32 123-153 (306)
61 3t8j_A Purine nucleosidase, (I 34.9 10 0.00034 32.3 0.6 27 6-32 123-153 (311)
62 1v32_A AT5G08430, hypothetical 34.4 14 0.0005 26.0 1.3 20 218-237 38-57 (101)
63 4fo5_A Thioredoxin-like protei 33.4 94 0.0032 21.7 5.8 38 20-57 33-70 (143)
64 3kfl_A Methionyl-tRNA syntheta 33.4 15 0.00052 33.8 1.6 31 9-39 11-47 (564)
65 3epw_A IAG-nucleoside hydrolas 31.4 16 0.00055 31.4 1.3 26 6-31 150-180 (338)
66 3gl3_A Putative thiol:disulfid 31.1 83 0.0028 22.1 5.2 37 20-56 29-65 (152)
67 4dlp_A Aminoacyl-tRNA syntheta 28.8 36 0.0012 30.9 3.3 31 9-39 11-46 (536)
68 1uhr_A SWI/SNF related, matrix 28.1 29 0.00098 23.9 1.9 18 219-236 31-48 (93)
69 3fz0_A Nucleoside hydrolase, p 27.8 17 0.00057 31.7 0.8 27 6-32 136-171 (360)
70 3drn_A Peroxiredoxin, bacterio 27.4 1E+02 0.0035 22.3 5.2 40 18-57 28-68 (161)
71 1ydh_A AT5G11950; structural g 25.5 97 0.0033 24.6 4.9 34 20-53 9-42 (216)
72 3dah_A Ribose-phosphate pyroph 25.3 3.1E+02 0.01 23.1 8.4 81 5-85 39-124 (319)
73 3sbx_A Putative uncharacterize 24.5 88 0.003 24.4 4.4 36 20-56 13-48 (189)
74 3eyt_A Uncharacterized protein 23.3 1.2E+02 0.0041 21.4 4.8 38 20-57 29-67 (158)
75 2zue_A Arginyl-tRNA synthetase 23.1 46 0.0016 31.1 2.9 22 18-39 116-140 (629)
76 3gkn_A Bacterioferritin comigr 23.0 1.2E+02 0.0043 21.6 4.9 37 21-57 37-74 (163)
77 3ixr_A Bacterioferritin comigr 21.9 1.8E+02 0.006 21.5 5.7 37 21-57 53-90 (179)
78 3kij_A Probable glutathione pe 20.7 1.9E+02 0.0066 21.2 5.7 37 21-57 40-76 (180)
79 1jil_A Tyrrs, tyrosyl-tRNA syn 20.0 2.5E+02 0.0084 24.7 6.9 40 6-46 20-59 (420)
No 1
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=100.00 E-value=1e-50 Score=346.36 Aligned_cols=220 Identities=41% Similarity=0.722 Sum_probs=183.9
Q ss_pred CCceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCe-EEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCceeecc
Q 026289 18 GKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGY-CVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDP 96 (240)
Q Consensus 18 ~~~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~-~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~i~v~~ 96 (240)
.+.++++||||||||+|+||+.+++.|.+.++.++. .+|+.+++|++.+++|+..++.++|++|+++|+++.+++.|++
T Consensus 3 ~~~~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~m~~~ai~~~~~~~v~~ 82 (252)
T 1nup_A 3 SRIPVVLLACGSFNPITNMHLRMFEVARDHLHQTGMYQVIQGIISPVNDTYGKKDLAASHHRVAMARLALQTSDWIRVDP 82 (252)
T ss_dssp CCEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTSEEEEEEEEEECCTTCSSSCCCCHHHHHHHHHHHGGGCSSEEECC
T ss_pred CCCceEEEEEecCcHhhHHHHHHHHHHHHHhcccCCceEEEEEEeCCCCcccCCCCCCHHHHHHHHHHHhcCCCceEeeh
Confidence 356789999999999999999999999999887753 3444568999888888888999999999999999999999999
Q ss_pred ccccCCCccChHHHHHHHHHHHhhh----------cc---CCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccE
Q 026289 97 WEANQSGYQRTLTVLSRVKNFLIEA----------GL---ISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGV 163 (240)
Q Consensus 97 ~E~~~~~~~~t~~tl~~l~~~~~~~----------~~---~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~ 163 (240)
||+.+++++||++||++++++|+.. +. .|+.+.+++||||+|++.+|.+|++|+++++++|++.+++
T Consensus 83 ~E~~~~~~syTidtL~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~fiiGaD~l~~l~~p~~W~~~~~~~i~~~~~l 162 (252)
T 1nup_A 83 WESEQAQWMETVKVLRHHHSKLLRSPPQMEGPDHGKALFSTPAAVPELKLLCGADVLKTFQTPNLWKDAHIQEIVEKFGL 162 (252)
T ss_dssp HHHHSSSCCCHHHHHHHHHHHHC--------------------CCCEEEEEEEHHHHHHTTSTTTSCHHHHHHHHHHTCE
T ss_pred HHhcCCCCCCHHHHHHHHHHHHhhccccccccccccccccCCCCCceEEEEEecchHhHCCCcCccCcchHHHHHhhCcE
Confidence 9999999999999999999988200 00 0221268999999999999998888998556899999999
Q ss_pred EEEeCCCCChhhhhhchHHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHCCCCCCC
Q 026289 164 ICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYLNS 237 (240)
Q Consensus 164 vv~~R~~~~~~~~~~~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~~LY~~~ 237 (240)
+|+.|+|.+..+...+...+.....+|++++.....+||||+||++++.|++|+++||++|++||++|+||+.+
T Consensus 163 vv~~R~g~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~ISST~IR~~~~~g~~i~~lvP~~V~~yI~~~~LY~~~ 236 (252)
T 1nup_A 163 VCVGRVSHDPKGYIAESPILRMHQHNIHLAKEPVQNEISATYIRRALGQGQSVKYLIPDAVITYIKDHGLYTKG 236 (252)
T ss_dssp EEECCTTCCHHHHHHHCHHHHHTGGGEEEECCCSCCCCCHHHHHHHHHTTCCCBTTBCHHHHHHHHHTTCSCC-
T ss_pred EEEECCCCChHHhhhhHHHHHhcCCCEEEEcCCCCCccCHHHHHHHHHcCCCchhcCCHHHHHHHHHcCCcCCC
Confidence 99999998865433333344444568988864335799999999999999999999999999999999999854
No 2
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=100.00 E-value=2.5e-50 Score=348.17 Aligned_cols=221 Identities=47% Similarity=0.785 Sum_probs=183.4
Q ss_pred ccCCceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCe-EEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCceee
Q 026289 16 TQGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGY-CVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMV 94 (240)
Q Consensus 16 ~~~~~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~-~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~i~v 94 (240)
++.+.++++||||||||||+||+.|++.|.+.++.++. .++.++|+|++.+++|+..+++++|++|+++|+++.+++.|
T Consensus 3 ~~~~~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~~~~vvv~~f~P~~~~~~K~~l~s~~~R~~ml~~ai~~~~~~~v 82 (279)
T 1kqn_A 3 NSEKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTGRYTVVKGIISPVGDAYKKKGLIPAYHRVIMAELATKNSKWVEV 82 (279)
T ss_dssp ---CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTSSEEEEEEEEEECCGGGCCTTCCCHHHHHHHHHHHTTTCSSEEE
T ss_pred CCCCCceEEEEEeeecHhhHHHHHHHHHHHHHhcccCCceEEEEEEcCCCCCccccCCCCHHHHHHHHHHHhcCCCcEEE
Confidence 45677899999999999999999999999999988762 23333588988888887889999999999999999999999
Q ss_pred ccccccCCCccChHHHHHHHHHHHhhhc------------------------------c--CCCCCceEEEEEcchhhhh
Q 026289 95 DPWEANQSGYQRTLTVLSRVKNFLIEAG------------------------------L--ISTESLKVMLVCGSDLLES 142 (240)
Q Consensus 95 ~~~E~~~~~~~~t~~tl~~l~~~~~~~~------------------------------~--~p~~~~~~~fl~G~D~l~~ 142 (240)
++||+.+.+++||++||++++++++... + .|+...+++||||+|++.+
T Consensus 83 ~~~E~~~~~~syTidtL~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~i~GaD~l~~ 162 (279)
T 1kqn_A 83 DTWESLQKEWKETLKVLRHHQEKLEASDCDHQQNSPTLERPGRKRKWTETQDSSQKKSLEPKTKAVPKVKLLCGADLLES 162 (279)
T ss_dssp CCTGGGCSSCCCHHHHHHHHHHHHTC--------------------------------------CCCEEEEEEEHHHHHH
T ss_pred eccccccCCCCcHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccccccCCCCCccEEEEEehhhHhh
Confidence 9999999999999999999999882000 0 0221268999999999999
Q ss_pred cCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhhchHHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcH
Q 026289 143 FAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTED 222 (240)
Q Consensus 143 l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~ 222 (240)
|.+|++|+++++++|++.++++|+.|+|....+.....+.|.++..+|++++.....+||||+||+++++|++|++|||+
T Consensus 163 ~~~p~~W~~~~~e~il~~~~lvv~~R~g~~~~~~~~~~~~l~~~~~~i~~v~~~~~~~ISST~IR~~l~~g~si~~lvP~ 242 (279)
T 1kqn_A 163 FAVPNLWKSEDITQIVANYGLICVTRAGNDAQKFIYESDVLWKHRSNIHVVNEWIANDISSTKIRRALRRGQSIRYLVPD 242 (279)
T ss_dssp TTSTTTSCHHHHHHHHHHTCEEEEESCHHHHHHHHHTCHHHHHTGGGEEEEECCSCCCCCHHHHHHHHHTTCCCBTTBCH
T ss_pred CcCccccCcchHHHHHhhCcEEEEeCCCCChHhhhhhHHHHhhcCCcEEEECCCCCCccCHHHHHHHHHcCCChhhcCCH
Confidence 99888899865689999999999999997654433333455555678999874335899999999999999999999999
Q ss_pred HHHHHHHHCCCCCC
Q 026289 223 KVIDYIRESRLYLN 236 (240)
Q Consensus 223 ~V~~yI~~~~LY~~ 236 (240)
+|++||++|+||..
T Consensus 243 ~V~~YI~~~~LY~~ 256 (279)
T 1kqn_A 243 LVQEYIEKHNLYSS 256 (279)
T ss_dssp HHHHHHHHHTCCSH
T ss_pred HHHHHHHHcCCcCC
Confidence 99999999999973
No 3
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.1e-47 Score=311.09 Aligned_cols=168 Identities=20% Similarity=0.285 Sum_probs=133.8
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCC--ceeecccc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSD--FIMVDPWE 98 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~--~i~v~~~E 98 (240)
++||||||||||||+||+.+++ |.+.+ |++++ +|+++++.|+..+++++|++|+++|+++.+ ++.|+++|
T Consensus 2 ~~igi~gGsFdPih~GHl~i~~-a~~~~--d~v~~-----~p~~~~~~k~~~~~~~~R~~m~~~a~~~~~~~~~~v~~~E 73 (177)
T 3h05_A 2 KKIAIFGSAFNPPSLGHKSVIE-SLSHF--DLVLL-----EPSIAHAWGKNMLDYPIRCKLVDAFIKDMGLSNVQRSDLE 73 (177)
T ss_dssp CEEEEEEECCSSCCHHHHHHHT-TCTTS--SEEEE-----EECC-------CCCHHHHHHHHHHHHHHHCCTTEEECCHH
T ss_pred cEEEEEEeccchhhHHHHHHHH-HHHHC--CEEEE-----EECCCCCCCCCCCCHHHHHHHHHHHHhcCCCCcEEEEehh
Confidence 4799999999999999999998 76655 77764 455555567788999999999999999874 89999999
Q ss_pred cc--CCC-ccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhh
Q 026289 99 AN--QSG-YQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEK 175 (240)
Q Consensus 99 ~~--~~~-~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~ 175 (240)
.+ +++ ++||++||++|++.| |+ .+++||||+|++.+|++ |++. ++|++.++++|++|
T Consensus 74 ~~l~~~~~~syT~dTl~~l~~~~------p~--~~~~~iiG~D~l~~l~~---W~~~--~~l~~~~~~vv~~r------- 133 (177)
T 3h05_A 74 QALYQPGQSVTTYALLEKIQEIY------PT--ADITFVIGPDNFFKFAK---FYKA--EEITERWTVMACPE------- 133 (177)
T ss_dssp HHHC----CCCHHHHHHHHHHHS------TT--SEEEEEECHHHHHTGGG---STTH--HHHHHHSEEEECCC-------
T ss_pred hhcccCCCCcchHHHHHHHHHHh------cC--CCeEEEEecchhhhccc---chhH--HHHHHhCCEEEEcC-------
Confidence 87 566 999999999999998 54 68999999999999997 5442 89999999999765
Q ss_pred hhhchHHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHCCCCCCCC
Q 026289 176 IISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYLNSN 238 (240)
Q Consensus 176 ~~~~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~~LY~~~~ 238 (240)
..+||||+||+++++|++|+++||++|.+||++|+||+.+.
T Consensus 134 ----------------------~~~iSST~IR~~i~~g~~~~~lvp~~V~~yI~~~~LY~~~~ 174 (177)
T 3h05_A 134 ----------------------KVKIRSTDIRNALIEGKDISTYTTPTVSELLLNEGLYRETL 174 (177)
T ss_dssp ----------------------SSCCCHHHHHHHHHHTCCCTTTSCHHHHHHHHC--------
T ss_pred ----------------------CCCCcHHHHHHHHHcCCChhHhCCHHHHHHHHHcCCCCCcc
Confidence 34999999999999999999999999999999999998653
No 4
>1yum_A 'probable nicotinate-nucleotide adenylyltransferase; alpha/beta domain; HET: CIT NCN; 1.70A {Pseudomonas aeruginosa} PDB: 1yul_A* 1yun_A*
Probab=100.00 E-value=2.4e-45 Score=311.32 Aligned_cols=199 Identities=20% Similarity=0.304 Sum_probs=165.2
Q ss_pred ceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccC-CCCCHHHHHHHHHHHHhcCCceeecccc
Q 026289 20 TYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKR-GLISAEHRINLCNLACKSSDFIMVDPWE 98 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~-~~~~~~~R~~Ml~~a~~~~~~i~v~~~E 98 (240)
.++|+||||||||+|+||+.+++.|.+.+++|++++ +|+.++++|+ ..+++++|++|+++|+++.+++.|+++|
T Consensus 22 ~~~i~i~~GsFdPiH~GHl~li~~a~~~~~ld~v~v-----~~~~~~p~K~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e 96 (242)
T 1yum_A 22 GKRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRL-----LPNARPPHRETPQVSAAQRLAMVERAVAGVERLTVDPRE 96 (242)
T ss_dssp CCEEEEEEECCTTCCHHHHHHHHHHHHHHTCSEEEE-----EECCCCGGGSCTTCCHHHHHHHHHHHHTTCTTEEECCGG
T ss_pred CceEEEEEeeCcHhhHHHHHHHHHHHHHcCCCEEEE-----EEcCCCCCCCCCCCCHHHHHHHHHHHhcCCCeEEEeeee
Confidence 457999999999999999999999999998888764 4556666774 6899999999999999999999999999
Q ss_pred ccCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhh
Q 026289 99 ANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIIS 178 (240)
Q Consensus 99 ~~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~ 178 (240)
+++++++||++||++++++|+ |+ .+++||+|+|++.+|.+|+.| ++|++.++++|++|+ ........
T Consensus 97 ~~~~~~sytvdtl~~l~~~~~-----p~--~~~~fI~G~D~l~~l~~W~~~-----~~i~~~~~~vv~~R~-~~~~~~~~ 163 (242)
T 1yum_A 97 LQRDKPSYTIDTLESVRAELA-----AD--DQLFMLIGWDAFCGLPTWHRW-----EALLDHCHIVVLQRP-DADSEPPE 163 (242)
T ss_dssp GGSSSSCCHHHHHHHHHHHSC-----TT--CEEEEEEEHHHHTTGGGSTTG-----GGSTTTCEEEEEECS-SSCCCCCG
T ss_pred ecCCCCCCHHHHHHHHHHHhC-----CC--CcEEEEEehhHhhhhhhhcCH-----HHHHhhCcEEEEECC-CchhhhhH
Confidence 999999999999999999883 33 689999999999999974444 789999999999998 32111100
Q ss_pred c-----hH-------HhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHCCCCCCC
Q 026289 179 D-----NE-------ILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYLNS 237 (240)
Q Consensus 179 ~-----~~-------~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~~LY~~~ 237 (240)
+ .. .|....++|.+++ .+..+||||+||++++.|++|+++||++|.+||++++||+.+
T Consensus 164 e~~~~~~~~~~~~~~~L~~~~~~i~~~~-~~~~~ISST~IR~~i~~g~~i~~lVP~~V~~yI~~~~LY~~~ 233 (242)
T 1yum_A 164 SLRDLLAARSVADPQALKGPGGQITFVW-QTPLAVSATQIRALLGAGRSVRFLVPDAVLNYIEAHHLYRAP 233 (242)
T ss_dssp GGHHHHHHHBCSCGGGCCSSSCCEEEEE-CCCCSCCHHHHHHHHHTTCCCBTTBCHHHHHHHHHTTTTCCC
T ss_pred HHHHHHHHhhccchhhhccCCCeEEEec-CCCCcCcHHHHHHHHHcCCChhHcCCHHHHHHHHHhCCcCCC
Confidence 0 00 1101234788887 456799999999999999999999999999999999999863
No 5
>2h29_A Probable nicotinate-nucleotide adenylyltransferase; NADD, namnat, nmnat; HET: DND; 2.00A {Staphylococcus aureus} PDB: 2h2a_A*
Probab=100.00 E-value=8.1e-45 Score=297.35 Aligned_cols=185 Identities=19% Similarity=0.283 Sum_probs=162.3
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCcccc--CCCCCHHHHHHHHHHHHhcCCceeecccc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKK--RGLISAEHRINLCNLACKSSDFIMVDPWE 98 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k--~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E 98 (240)
++++++||||||+|+||+.+++.|.+.++++.++ +.|+.++++| ...+++++|++|+++|+++.+++.|+++|
T Consensus 2 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~-----~~~~~~~~~k~~~~~~~~~~R~~m~~~a~~~~~~v~v~~~e 76 (189)
T 2h29_A 2 KKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFY-----FLPSFMSPLKKHHDFIDVQHRLTMIQMIIDELGFGDICDDE 76 (189)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHHHCCSEEE-----EEECSBCTTSCCCSSCCCHHHHHHHHHHHHHHTCCEECCHH
T ss_pred ceEEEEEecCCcccHHHHHHHHHHHHHcCCCEEE-----EEECCCCCCCcCCCCCCHHHHHHHHHHHHcCCCCEEEehHH
Confidence 4689999999999999999999999998888765 3556666677 35789999999999999999999999999
Q ss_pred ccCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhh
Q 026289 99 ANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIIS 178 (240)
Q Consensus 99 ~~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~ 178 (240)
+++++++||++||+++++.| |+ .+++||+|.|++.+++. |++. +++++.++++|++|++....
T Consensus 77 ~~~~~~syt~dtl~~l~~~~------p~--~~~~~i~G~D~~~~~~~---W~~~--~~i~~~~~~~v~~R~~~~~~---- 139 (189)
T 2h29_A 77 IKRGGQSYTYDTIKAFKEQH------KD--SELYFVIGTDQYNQLEK---WYQI--EYLKEMVTFVVVNRDKNSQN---- 139 (189)
T ss_dssp HHHCSBCCHHHHHHHHHHHS------TT--EEEEEEEEHHHHTTGGG---STTH--HHHHHHCEEEEECCSSSCCC----
T ss_pred hcCCCCCCHHHHHHHHHHHC------CC--CcEEEEEecchhhhhcc---ccCH--HHHHhhCcEEEEECCCCccc----
Confidence 99999999999999999988 54 68999999999999986 6654 78999999999999986521
Q ss_pred chHHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHCCCCC
Q 026289 179 DNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYL 235 (240)
Q Consensus 179 ~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~~LY~ 235 (240)
...++.+++ .+..+||||.||+.++.|++|+++||++|.+||++|+||+
T Consensus 140 -------~~~~i~~~~-~~~~~ISST~IR~~i~~g~~~~~lvP~~V~~yI~~~~LY~ 188 (189)
T 2h29_A 140 -------VENAMIAIQ-IPRVDISSTMIRQRVSEGKSIQVLVPKSVENYIKGEGLYE 188 (189)
T ss_dssp -------CCTTSEEEC-CCCBCCCHHHHHHHHHTTCCCBTTBCHHHHHHHHHHTTTC
T ss_pred -------cCCcEEEEc-CCCCccCHHHHHHHHHcCCChhhcCCHHHHHHHHHhCCcc
Confidence 124677776 4568999999999999999999999999999999999997
No 6
>1k4m_A NAMN adenylyltransferase; nucleotidyltransferase; HET: NAD CIT; 1.90A {Escherichia coli} SCOP: c.26.1.3 PDB: 1k4k_A*
Probab=100.00 E-value=4.8e-44 Score=297.98 Aligned_cols=195 Identities=24% Similarity=0.294 Sum_probs=163.8
Q ss_pred E-EEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccC-CCCCHHHHHHHHHHHHhcCCceeecccccc
Q 026289 23 V-LVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKR-GLISAEHRINLCNLACKSSDFIMVDPWEAN 100 (240)
Q Consensus 23 i-~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~-~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~~ 100 (240)
| +++||||||+|+||+.+++.|.+.+++|++++ .|+.++++|+ ..++.++|++|+++++++.+++.|+++|.+
T Consensus 4 i~~i~~GsFdPiH~GH~~l~~~a~~~~~~d~v~~-----~~~~~~~~k~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~~ 78 (213)
T 1k4m_A 4 LQALFGGTFDPVHYGHLKPVETLANLIGLTRVTI-----IPNNVPPHRPQPEANSVQRKHMLELAIADKPLFTLDERELK 78 (213)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHHHHTCSCEEE-----EECSSCTTSCCCSSCHHHHHHHHHHHHTTCTTEEECCHHHH
T ss_pred EEEEEEeCcCCCCHHHHHHHHHHHHHcCCCEEEE-----EECCCCCCCCCCCCCHHHHHHHHHHHhccCCCEEEeHHHhc
Confidence 6 99999999999999999999999998888763 5555666774 689999999999999999999999999999
Q ss_pred CCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhh---h
Q 026289 101 QSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKI---I 177 (240)
Q Consensus 101 ~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~---~ 177 (240)
+++++||++|++++++.++ |+ .+++||+|.|++.+|+. |++. ++|++.++++|++|+|...... .
T Consensus 79 ~~~~s~t~~~l~~l~~~~~-----~~--~~~~~i~G~D~~~~l~~---W~~~--~~i~~~~~~vv~~R~~~~~~~~~~~~ 146 (213)
T 1k4m_A 79 RNAPSYTAQTLKEWRQEQG-----PD--VPLAFIIGQDSLLTFPT---WYEY--ETILDNAHLIVCRRPGYPLEMAQPQY 146 (213)
T ss_dssp CSSCCCHHHHHHHHHHHHC-----TT--SCEEEEEEHHHHHHGGG---STTH--HHHHHHCEEEEECCTTCCSSCSSHHH
T ss_pred CCCCCcHHHHHHHHHHHhC-----CC--CcEEEEEehhhhhhhhc---cCCH--HHHHhhCcEEEEECCCCchhhhhhHH
Confidence 9999999999999998863 43 68999999999999996 5553 8999999999999998753210 0
Q ss_pred h---------chHHhhh-cCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHCCCCC
Q 026289 178 S---------DNEILDK-NKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYL 235 (240)
Q Consensus 178 ~---------~~~~l~~-~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~~LY~ 235 (240)
. +.+.+.. ..++|.+++ .+..+||||.||+.++.|++|+++||++|.+||++|+||+
T Consensus 147 ~~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~iSST~IR~~i~~g~~i~~lvP~~V~~yI~~~~LY~ 213 (213)
T 1k4m_A 147 QQWLEDHLTHNPEDLHLQPAGKIYLAE-TPWFNISATIIRERLQNGESCEDLLPEPVLTYINQQGLYR 213 (213)
T ss_dssp HHHHHHHBCSCTTHHHHSSSCCEEEEC-CCCCCCCHHHHHHHHHTTCCCTTTSCHHHHHHHHHHTTTC
T ss_pred HHHHhhhhcchhhhhhhccCCeEEEEe-CCcccCCHHHHHHHHHcCCCchhcCCHHHHHHHHHcCCCC
Confidence 0 0001111 234788887 4578999999999999999999999999999999999995
No 7
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=100.00 E-value=2.1e-42 Score=284.07 Aligned_cols=185 Identities=23% Similarity=0.296 Sum_probs=157.0
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCcccc--CCCCCHHHHHHHHHHHHhcCCceeecccc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKK--RGLISAEHRINLCNLACKSSDFIMVDPWE 98 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k--~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E 98 (240)
++++++||||||+|+||+.+++.|.+.++.+++++ .|+.++++| +..++.++|++|+++++++.+++.|+++|
T Consensus 7 ~~~~v~~GsFdp~H~GH~~l~~~a~~~~~~d~v~~-----~~~~~~~~k~~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e 81 (194)
T 1kam_A 7 KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWF-----MPNQIPPHKQNEDYTDSFHRVEMLKLAIQSNPSFKLELVE 81 (194)
T ss_dssp CEEEEEEECCSSCCHHHHHHHHHHHHHTTCSEEEE-----EECCCC---------CHHHHHHHHHHHHTTCTTEEECCGG
T ss_pred cEEEEEEeccccccHHHHHHHHHHHHHhCCCEEEE-----EECCCCCCcCCcCCCCHHHHHHHHHHHHcCCCCeEEeHHH
Confidence 37999999999999999999999999988787754 444455666 35789999999999999999999999999
Q ss_pred ccCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhh
Q 026289 99 ANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIIS 178 (240)
Q Consensus 99 ~~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~ 178 (240)
.++++++||++|+++++..| |+ .+++||+|.|++.++.. |+++ ++|++.++++|++|+|....
T Consensus 82 ~~~~~~~~t~~~l~~l~~~~------p~--~~~~~v~G~D~~~~~~~---W~~~--e~i~~~~~~~v~~R~g~~~~---- 144 (194)
T 1kam_A 82 MEREGPSYTFDTVSLLKQRY------PN--DQLFFIIGADMIEYLPK---WYKL--DELLNLIQFIGVKRPGFHVE---- 144 (194)
T ss_dssp GSTTCCCSHHHHHHHHHHHS------TT--SEEEEEEETTTTTTCCC---CHHH--HHHHHHSEEEEEECSSCCCC----
T ss_pred hcCCCCCChHHHHHHHHHHC------CC--CcEEEEEecchhhhhcc---ccCH--HHHHHhCcEEEEECCCcchh----
Confidence 99999999999999999998 54 68999999999999985 7765 89999999999999986420
Q ss_pred chHHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHCCCCC
Q 026289 179 DNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYL 235 (240)
Q Consensus 179 ~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~~LY~ 235 (240)
+ +.++.+++. +..+||||.||++++.|++|+++||++|.+||++|+||+
T Consensus 145 ----l---~~~i~~~~~-~~~~ISST~IR~~i~~g~~~~~lvP~~V~~yI~~~~LY~ 193 (194)
T 1kam_A 145 ----T---PYPLLFADV-PEFEVSSTMIRERFKSKKPTDYLIPDKVKKYVEENGLYE 193 (194)
T ss_dssp ----C---SSCCEEEEC-CCBCCCHHHHHHHHHHTCCCTTTSCHHHHHHHHHTTCSC
T ss_pred ----c---CCCEEEeCC-CCCCcCHHHHHHHHHcCCCchhhCCHHHHHHHHHcCCcc
Confidence 1 246777763 456999999999999999999999999999999999997
No 8
>2qtr_A Nicotinate (nicotinamide) nucleotide adenylyltran; NAD, nucleotidyltransferase, pyridine nucleotide biosynthesi transferase; HET: NXX; 1.70A {Bacillus anthracis} PDB: 3dv2_A 3mla_A* 3hfj_A* 3mlb_A* 3mmx_A* 3e27_A* 2qtn_A* 2qtm_A*
Probab=100.00 E-value=9.2e-43 Score=284.70 Aligned_cols=185 Identities=22% Similarity=0.316 Sum_probs=160.0
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCcccc--CCCCCHHHHHHHHHHHHhcCCceeecccc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKK--RGLISAEHRINLCNLACKSSDFIMVDPWE 98 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k--~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E 98 (240)
++|+++||||||+|+||+.+++.|.+.++++.+++ .|+..+++| +..++.++|++|+++++++.+++.++++|
T Consensus 2 ~~i~i~~GsFDPvH~GH~~li~~a~~~~~~d~v~~-----~~~~~~~~k~~~~~~~~~~R~~ml~~~~~~~~~v~v~~~e 76 (189)
T 2qtr_A 2 RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWF-----LPNQIPPHKQGRNITSVESRLQMLELATEAEEHFSICLEE 76 (189)
T ss_dssp CEEEEEEECCSSCCHHHHC-CHHHHHHTTCSEEEE-----EECSSCTTCTTSCCCCHHHHHHHHHHHHTTCTTEEECCTG
T ss_pred CeEEEEecCcccccHHHHHHHHHHHHHcCCCEEEE-----EECCCCCCccCCCCCCHHHHHHHHHHHhCCCCCEEEehHH
Confidence 36899999999999999999999999988887753 455566677 46899999999999999999999999999
Q ss_pred ccCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhh
Q 026289 99 ANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIIS 178 (240)
Q Consensus 99 ~~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~ 178 (240)
.++.+++||++|+++++..+ |+ .+++||+|.|.+..+.. |++. ++|++.++++|++|.+....
T Consensus 77 ~~~~~~~~~~~~l~~l~~~~------p~--~~~~~v~G~D~~~~~~~---w~~~--~~l~~~~~~~v~~r~~~~~~---- 139 (189)
T 2qtr_A 77 LSRKGPSYTYDTMLQLTKKY------PD--VQFHFIIGGDMVEYLPK---WYNI--EALLDLVTFVGVARPGYKLR---- 139 (189)
T ss_dssp GGSCSCCCHHHHHHHHHHHC------TT--CEEEEEEEHHHHHHGGG---STTH--HHHTTTCEEEEECCTTCCCC----
T ss_pred hcCCCCCCHHHHHHHHHHHC------CC--CCEEEEEehhhhhhhhc---cCCH--HHHHHhCCEEEEECCCCCcc----
Confidence 99999999999999999888 54 68999999999999995 6654 79999999999999986431
Q ss_pred chHHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHCCCCC
Q 026289 179 DNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYL 235 (240)
Q Consensus 179 ~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~~LY~ 235 (240)
...++.+++ .+..+||||.||++++.|++|+++||++|.+||++|+||+
T Consensus 140 -------~~~~v~~~~-~~~~~iSST~IR~~l~~g~~~~~lvP~~V~~yI~~~~lY~ 188 (189)
T 2qtr_A 140 -------TPYPITTVE-IPEFAVSSSLLRERYKEKKTCKYLLPEKVQVYIERNGLYE 188 (189)
T ss_dssp -------CSSCCEEEC-CCCCCCCHHHHHHHHHTTCCCTTTSCHHHHHHHHHTTGGG
T ss_pred -------CCceEEEEc-CCCCccCHHHHHHHHHcCCCchhcCCHHHHHHHHHcCCcC
Confidence 012666775 3456999999999999999999999999999999999996
No 9
>3nd5_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway; 2.30A {Enterococcus faecalis} SCOP: c.26.1.0 PDB: 3nd6_A* 3nd7_A*
Probab=100.00 E-value=2.8e-33 Score=225.00 Aligned_cols=161 Identities=16% Similarity=0.146 Sum_probs=118.2
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCceee-ccccc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMV-DPWEA 99 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~i~v-~~~E~ 99 (240)
++||+|||||||+|+||+.+++.|.+.+ |++++++ . .+++|+..++.++|++|+++|+++.+++.| +++|
T Consensus 2 m~i~i~~GsFDPiH~GHl~i~~~a~~~~--D~viv~v-----~-~~~~K~~~~~~~~R~~ml~~a~~~~~~v~v~~~~e- 72 (171)
T 3nd5_A 2 RKIALFPGSFDPMTNGHLNLIERSAKLF--DEVIIGV-----F-INTSKQTLFTPEEKKYLIEEATKEMPNVRVIMQET- 72 (171)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHTTC--SEEEEEE-----E-C------CCCHHHHHHHHHHHHTTCTTEEEEEECS-
T ss_pred CeEEEEEEEccccCHHHHHHHHHHHHHC--CCeEEEE-----e-cCCCCCCCCCHHHHHHHHHHHHccCCCEEEeeCCC-
Confidence 4699999999999999999999999976 7776542 2 235677889999999999999999999999 8887
Q ss_pred cCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhhc
Q 026289 100 NQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISD 179 (240)
Q Consensus 100 ~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~~ 179 (240)
+||+++++.++ + + +||+|.|++.++. ..++.+.+ +|.
T Consensus 73 -----~~tvd~~~~l~---------~----~-~~i~G~~~~~d~~-----------~e~~la~~---nr~---------- 109 (171)
T 3nd5_A 73 -----QLTVESAKSLG---------A----N-FLIRGIRNVKDYE-----------YEKDIAKM---NQH---------- 109 (171)
T ss_dssp -----SCHHHHHHHHT---------C----C-EEEEEECSHHHHH-----------HHHHHHHH---HHH----------
T ss_pred -----CcHHHHHHHCC---------C----C-EEEECCCchhhhH-----------HHHHHHHH---hhh----------
Confidence 48999988763 2 2 8999999887753 22222222 331
Q ss_pred hHHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHCCCCCC
Q 026289 180 NEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYLN 236 (240)
Q Consensus 180 ~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~~LY~~ 236 (240)
+....+.++++......+||||.||+.++.|++++++||++|.+||++++||..
T Consensus 110 ---l~~~~etv~l~~~~~~~~ISST~IRe~~~~g~~i~~lVP~~V~~~i~~~~~y~~ 163 (171)
T 3nd5_A 110 ---LAPEIETVFLLAEEPYAHVSSSLLKEVLRFGGDVSDYLPPNIYHALKQKKNDWS 163 (171)
T ss_dssp ---HCTTSEEEEEECCGGGTTCCHHHHHHHHHTTCCCGGGSCHHHHHHHHHC-----
T ss_pred ---hcCCccEEEEeCCccccccchHHHHHHHHcCCChhHhCCHHHHHHHHHhhcccc
Confidence 111124677776433459999999999999999999999999999999999964
No 10
>3f3m_A Phosphopantetheine adenylyltransferase; PPAT, coenzyme A BIO pathway, coenzyme A biosynthesis, nucleotidyltransferase; HET: PPS; 2.40A {Staphylococcus aureus} SCOP: c.26.1.0
Probab=99.97 E-value=6.6e-32 Score=216.40 Aligned_cols=155 Identities=19% Similarity=0.306 Sum_probs=117.8
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCceeecccccc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEAN 100 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~~ 100 (240)
++||+|||||||+|+||+.+++.|.+.+ |+++++ |+. +++|+..++.++|++|+++|+++.+++.|+++|
T Consensus 3 ~ki~i~~GsFDPiH~GHl~i~~~a~~~~--d~viv~-----v~~-~p~K~~~~~~~~R~~ml~~a~~~~~~v~v~~~e-- 72 (168)
T 3f3m_A 3 HTIAVIPGSFDPITYGHLDIIERSTDRF--DEIHVC-----VLK-NSKKEGTFSLEERMDLIEQSVKHLPNVKVHQFS-- 72 (168)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGS--SEEEEE-----ECC------CCSCHHHHHHHHHHHTTTCTTEEEEECC--
T ss_pred ceEEEEEEEcCcCCHHHHHHHHHHHHhC--CEEEEE-----EcC-CCCCCCCCCHHHHHHhHHHHhcCCCCEEEEEcC--
Confidence 4699999999999999999999999976 777654 333 347778899999999999999999999999998
Q ss_pred CCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhhch
Q 026289 101 QSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDN 180 (240)
Q Consensus 101 ~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~~~ 180 (240)
.||++|++.++ + -+||+|.|++.++. | + .+++. +.|.
T Consensus 73 ----~~tvd~~~~l~---------~-----~~~I~G~d~~~d~~----~---e-~~~a~------~~r~----------- 109 (168)
T 3f3m_A 73 ----GLLVDYCEQVG---------A-----KTIIRGLRAVSDFE----Y---E-LRLTS------MNKK----------- 109 (168)
T ss_dssp ----SCHHHHHHHHT---------C-----CEEEEEECTTCCHH----H---H-HHHHH------HHHH-----------
T ss_pred ----CCHHHHHHHcC---------C-----CEEEEcCCchhhhh----H---H-HHHhH------HhHh-----------
Confidence 39999998764 2 26999999886643 2 1 13332 1221
Q ss_pred HHhhhcCCCEEEEcCCCCCC-CCHHHHHHHHHcCCCCCCCCcHHHHHHHHHC
Q 026289 181 EILDKNKGNIKLVDELVPNQ-ISSTRIRDCICRGLSIKYLTEDKVIDYIRES 231 (240)
Q Consensus 181 ~~l~~~~~~i~~l~~~~~~~-iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~ 231 (240)
+......|++++ .+..+ ||||.||+.++.|++|++|||++|.+||+++
T Consensus 110 --l~~~~e~v~l~~-~p~~~~ISST~IRe~~~~g~~i~~lvP~~V~~~i~~~ 158 (168)
T 3f3m_A 110 --LNNEIETLYMMS-STNYSFISSSIVKEVAAYRADISEFVPPYVEKALKKK 158 (168)
T ss_dssp --HCTTSEEEEEEC-CTTTTTCCHHHHHHHHHTTCCCTTTSCHHHHHHHHHH
T ss_pred --hCCCCcEEEEeC-CcccccccHHHHHHHHHcCCChhHHCCHHHHHHHHHh
Confidence 110113577776 35445 9999999999999999999999999999876
No 11
>1o6b_A Phosphopantetheine adenylyltransferase; structural genomics; HET: ADP; 2.20A {Bacillus subtilis} SCOP: c.26.1.3
Probab=99.97 E-value=9.4e-32 Score=215.88 Aligned_cols=162 Identities=19% Similarity=0.189 Sum_probs=121.1
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCceeecccccc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEAN 100 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~~ 100 (240)
++++++||||||+|+||+.+++.|.+.+ |+++++ |+.+ |.|+.+++.++|++|+++++++.+++.++++|
T Consensus 2 ~~i~i~~GsFDpvH~GH~~li~~a~~~~--d~v~v~-----~~~~-p~k~~l~~~~~R~~ml~~a~~~~~~v~v~~~e-- 71 (169)
T 1o6b_A 2 ASIAVCPGSFDPVTYGHLDIIKRGAHIF--EQVYVC-----VLNN-SSKKPLFSVEERCELLREVTKDIPNITVETSQ-- 71 (169)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEE-----ECCC-CSSCCSSCHHHHHHHHHHHHTTCTTEEEEECS--
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHhC--CEEEEE-----ECCC-CccCCCCCHHHHHHHHHHHHhcCCCEEEcccc--
Confidence 3689999999999999999999999976 666544 3333 45667899999999999999999999999888
Q ss_pred CCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhhch
Q 026289 101 QSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDN 180 (240)
Q Consensus 101 ~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~~~ 180 (240)
+||+++++.++ + + +|++|.|.+.++. + .. .++++.|.+..
T Consensus 72 ----~~~~~~l~~l~---------~----~-~~i~G~d~~~~~~----~-------~~---~~~~~~r~~~~-------- 111 (169)
T 1o6b_A 72 ----GLLIDYARRKN---------A----K-AILRGLRAVSDFE----Y-------EM---QGTSVNRVLDE-------- 111 (169)
T ss_dssp ----SCHHHHHHHTT---------C----S-EEEEEECSGGGHH----H-------HH---HHHHHHHHHCT--------
T ss_pred ----hHHHHHHHHcC---------C----C-EEEEcCccccchH----H-------HH---HHHHHhccccC--------
Confidence 58998876542 1 2 7999999876543 1 11 11122332110
Q ss_pred HHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHCCCCCCC
Q 026289 181 EILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYLNS 237 (240)
Q Consensus 181 ~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~~LY~~~ 237 (240)
....+.++.......||||.||++++.|++++++||++|.+||++++||+.+
T Consensus 112 -----~~~~i~~~~~~~~~~ISST~IR~~l~~G~~~~~~vP~~V~~yi~~~~ly~~~ 163 (169)
T 1o6b_A 112 -----SIETFFMMANNQYSFLSSSIVKEVARYDGSVSEFVPPEVELALQQKFRQGGS 163 (169)
T ss_dssp -----TSEEEEEECCSTTTTCCHHHHHHHHHTTCCCTTTSCHHHHHHHHHHHHSCSC
T ss_pred -----CCCEEEEECCCCCCcCcHHHHHHHHHcCCChhHHCCHHHHHHHHHhhCcCCC
Confidence 0023444442223589999999999999999999999999999999999865
No 12
>1vlh_A Phosphopantetheine adenylyltransferase; TM0741, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: PNS; 2.20A {Thermotoga maritima} SCOP: c.26.1.3
Probab=99.97 E-value=4.1e-31 Score=213.15 Aligned_cols=156 Identities=19% Similarity=0.177 Sum_probs=118.5
Q ss_pred EEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCceeeccccccC
Q 026289 22 VVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEANQ 101 (240)
Q Consensus 22 ~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~~~ 101 (240)
.||+|||||||+|+||+.+++.|++.+ |+++++ |+.++ .|+..+++++|++|+++|+++.+++.|+++|
T Consensus 13 ~i~i~~GsFdP~H~GHl~l~~~A~~~~--D~viv~-----v~~~~-~kk~~~~~~~R~~ml~~a~~~~~~v~v~~~e--- 81 (173)
T 1vlh_A 13 MKAVYPGSFDPITLGHVDIIKRALSIF--DELVVL-----VTENP-RKKCMFTLEERKKLIEEVLSDLDGVKVDVHH--- 81 (173)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHHTTC--SEEEEE-----EECCT-TCCCSSCHHHHHHHHHHHTTTCTTEEEEEEC---
T ss_pred eEEEEEEEECcCcHHHHHHHHHHHHHC--CEEEEE-----EeCCC-CCCCCCCHHHHHHHHHHHhcCCCCEEEecCc---
Confidence 589999999999999999999999977 777654 33333 4457899999999999999999999999988
Q ss_pred CCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhhchH
Q 026289 102 SGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNE 181 (240)
Q Consensus 102 ~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~~~~ 181 (240)
+ ||++|+++++ + + +|+.| +.. |++. +.++ ++++++|++...
T Consensus 82 -~--~tvd~l~~l~---------~----~-~~i~g------l~~---w~d~--~~~~---~~~~~~r~~~~~-------- 122 (173)
T 1vlh_A 82 -G--LLVDYLKKHG---------I----K-VLVRG------LRA---VTDY--EYEL---QMALANKKLYSD-------- 122 (173)
T ss_dssp -S--CHHHHHHHHT---------C----C-EEEEE------ECT---TSCH--HHHH---HHHHHHHHHSTT--------
T ss_pred -c--hHHHHHHHhC---------C----C-eEEeC------CCc---ccch--hhcc---chhhcCCCCCCC--------
Confidence 2 9999998864 1 2 36655 344 5443 4443 455666654310
Q ss_pred HhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHCC
Q 026289 182 ILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRESR 232 (240)
Q Consensus 182 ~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~~ 232 (240)
...++++.......||||.||+.++.|.+++++||++|.+||+++.
T Consensus 123 -----~~~i~l~~~~~~~~iSST~IR~~i~~g~~i~~lvP~~V~~yI~~~~ 168 (173)
T 1vlh_A 123 -----LETVFLIASEKFSFISSSLVKEVALYGGDVTEWVPPEVARALNEKL 168 (173)
T ss_dssp -----CEEEEEECCGGGTTCCHHHHHHHHHTTCCCTTTSCHHHHHHHHHHT
T ss_pred -----CcEEEEeCCCCCCceeHHHHHHHHHcCCChhHcCCHHHHHHHHHHH
Confidence 1245555422234599999999999999999999999999999874
No 13
>3nbk_A Phosphopantetheine adenylyltransferase; PPAT, PHP; HET: PNS; 1.58A {Mycobacterium tuberculosis} PDB: 3nba_A* 3pnb_A* 4e1a_A 3lcj_A 3rba_A* 1tfu_A* 3rff_A 3rhs_A* 3uc5_A*
Probab=99.96 E-value=8.4e-30 Score=204.92 Aligned_cols=158 Identities=16% Similarity=0.227 Sum_probs=120.5
Q ss_pred CCceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCceeeccc
Q 026289 18 GKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPW 97 (240)
Q Consensus 18 ~~~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~i~v~~~ 97 (240)
...++++||||||||+|+||+.+++.|.+.+ |+++++ |+.+ ++|+..++.++|++|+++++++.+++.|++|
T Consensus 18 ~~~mki~i~~GsFDPiH~GHl~ii~~A~~~~--D~Viv~-----v~~n-p~K~~~~s~eeR~~mv~~a~~~~~~v~V~~~ 89 (177)
T 3nbk_A 18 GSHMTGAVCPGSFDPVTLGHVDIFERAAAQF--DEVVVA-----ILVN-PAKTGMFDLDERIAMVKESTTHLPNLRVQVG 89 (177)
T ss_dssp --CCCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEE-----ECCC-TTSCCSSCHHHHHHHHHHHCTTCTTEEEEEC
T ss_pred CCCCEEEEEEEeeCCCCHHHHHHHHHHHHHC--CEEEEE-----EcCC-CCCCCCCCHHHHHHHHHHHhCCCCCEEEEec
Confidence 3456899999999999999999999999987 787654 3333 4777899999999999999999999999998
Q ss_pred cccCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhh
Q 026289 98 EANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKII 177 (240)
Q Consensus 98 E~~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~ 177 (240)
| .||+++++.+. ++ ++|.|.+++.++. | + .++. .+ +|
T Consensus 90 e------~l~vd~~~~~~-------------a~-~ivrGlr~~~Dfe----y---e-~~~a---~~---nr--------- 126 (177)
T 3nbk_A 90 H------GLVVDFVRSCG-------------MT-AIVKGLRTGTDFE----Y---E-LQMA---QM---NK--------- 126 (177)
T ss_dssp C------SCHHHHHHHTT-------------CC-EEEEEECTTCCHH----H---H-HHHH---HH---HH---------
T ss_pred C------chHHHHHHHcC-------------CC-EEEECCCchhHHH----H---H-HHHH---HH---HH---------
Confidence 8 38898887642 22 6889988776653 2 1 1222 11 22
Q ss_pred hchHHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHC
Q 026289 178 SDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRES 231 (240)
Q Consensus 178 ~~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~ 231 (240)
.+ ..-+.++++.......||||.||+.++.|.+|+++||+.|.+||+++
T Consensus 127 ----~l-~~ietvfl~~~~~~~~ISST~IRe~~~~ggdv~~lVP~~V~~~l~~~ 175 (177)
T 3nbk_A 127 ----HI-AGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDR 175 (177)
T ss_dssp ----HH-HCCEEEEEECCGGGSSCCHHHHHHHHHTTCCCGGGSCHHHHHHHHHH
T ss_pred ----hc-CCCceEEEeCCCcccccchHHHHHHHHcCCChhHhCCHHHHHHHHHH
Confidence 11 11235666654445799999999999999999999999999999874
No 14
>1qjc_A Phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.64A {Escherichia coli} SCOP: c.26.1.3 PDB: 1h1t_A* 1gn8_A* 1b6t_A* 3l92_A* 3l93_A
Probab=99.96 E-value=4.6e-30 Score=203.53 Aligned_cols=155 Identities=13% Similarity=0.117 Sum_probs=113.0
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCceeecccccc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEAN 100 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~~ 100 (240)
++++++||||||+|+||+.+++.|.+.+ |++++++ +.+ ++|+..++.++|++|+++|+.+.+++.++++|
T Consensus 1 ~~i~i~~GsFDpvH~GH~~l~~~a~~~~--d~v~v~~-----~~~-p~k~~~~~~~~R~~ml~~a~~~~~~v~v~~~~-- 70 (158)
T 1qjc_A 1 QKRAIYPGTFDPITNGHIDIVTRATQMF--DHVILAI-----AAS-PSKKPMFTLEERVALAQQATAHLGNVEVVGFS-- 70 (158)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEEE-----ESC-CSSCCSSCHHHHHHHHHHHTTTCTTEEEEEEC--
T ss_pred CCEEEEEecCCCCCHHHHHHHHHHHHhC--CEEEEEE-----CCC-CCCCCCCCHHHHHHHHHHHHhcCCCeEEcccc--
Confidence 3589999999999999999999999976 6776553 222 34667899999999999999999999999988
Q ss_pred CCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhhch
Q 026289 101 QSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDN 180 (240)
Q Consensus 101 ~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~~~ 180 (240)
.||+++++.++ + + +|++|.|...+ | +.+.+.+ .+.|....
T Consensus 71 ----~~~~~~l~~l~---------~----~-~~v~G~d~~~~------~-----~~~~~~~---~~~r~~~~-------- 110 (158)
T 1qjc_A 71 ----DLMANFARNQH---------A----T-VLIRGLRAVAD------F-----EYEMQLA---HMNRHLMP-------- 110 (158)
T ss_dssp ----SCHHHHHHHTT---------C----C-EEEEECCTTCC------H-----HHHHHHH---HHHHHHCT--------
T ss_pred ----hHHHHHHHHcC---------C----C-EEEEeccchhh------h-----HHHHHHH---HhCccCCC--------
Confidence 38888876542 2 2 89999875432 3 2222211 12222100
Q ss_pred HHhhhcCCCEEEEcCCCC-CCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHC
Q 026289 181 EILDKNKGNIKLVDELVP-NQISSTRIRDCICRGLSIKYLTEDKVIDYIRES 231 (240)
Q Consensus 181 ~~l~~~~~~i~~l~~~~~-~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~ 231 (240)
....+.++. .+. ..||||.||++++.|++|+++||++|.+||++|
T Consensus 111 -----~~~~i~~~~-~~~~~~iSST~IR~~i~~g~~~~~~vP~~V~~yI~~~ 156 (158)
T 1qjc_A 111 -----ELESVFLMP-SKEWSFISSSLVKEVARHQGDVTHFLPENVHQALMAK 156 (158)
T ss_dssp -----TSEEEEECC-CGGGTTCCHHHHHHHHHTTCCCGGGSCHHHHHHHHHH
T ss_pred -----CCCEEEEEC-CCCCCccCHHHHHHHHHcCCChhHhCCHHHHHHHHHh
Confidence 012344443 233 579999999999999999999999999999986
No 15
>1od6_A PPAT, phosphopantetheine adenylyltransferase; coenzyme A biosynthesis, nucleotidyltransferase; HET: PNS; 1.5A {Thermus thermophilus} SCOP: c.26.1.3
Probab=99.96 E-value=3e-29 Score=199.33 Aligned_cols=152 Identities=19% Similarity=0.171 Sum_probs=109.5
Q ss_pred EEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccC--CCCCHHHHHHHHHHHHhcCCceeeccccccC
Q 026289 24 LVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKR--GLISAEHRINLCNLACKSSDFIMVDPWEANQ 101 (240)
Q Consensus 24 ~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~--~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~~~ 101 (240)
+++||||||+|+||+.+++.|.+.+ |++++++ +.+ ++|+ ..++.++|++|+++++++.+++.++++|.
T Consensus 3 ~v~~GsFdp~H~GH~~l~~~a~~~~--d~v~v~~-----~~~-p~k~~~~~~~~~~R~~ml~~a~~~~~~v~v~~~e~-- 72 (160)
T 1od6_A 3 VVYPGSFDPLTNGHLDVIQRASRLF--EKVTVAV-----LEN-PSKRGQYLFSAEERLAIIREATAHLANVEAATFSG-- 72 (160)
T ss_dssp EEEEECCTTCCHHHHHHHHHHHHHS--SEEEEEE-----ECC------CCSSCHHHHHHHHHHHTTTCTTEEEEEECS--
T ss_pred EEEEeeeCCCCHHHHHHHHHHHHHC--CEEEEEE-----cCC-CCCCCCCCCCHHHHHHHHHHHhcCCCCEEEEecCc--
Confidence 8999999999999999999999976 6676543 222 3454 58999999999999999999999999882
Q ss_pred CCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhhchH
Q 026289 102 SGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDNE 181 (240)
Q Consensus 102 ~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~~~~ 181 (240)
||+++++.++ + + +|++|.|. |.+. +.+.+.+ ++.|.+..
T Consensus 73 ----~~~~~l~~l~---------~----~-~~v~G~d~---------~~~~--~~~~~~~---~~~r~~~~--------- 111 (160)
T 1od6_A 73 ----LLVDFVRRVG---------A----Q-AIVKGLRA---------VSDY--EYELQMA---HLNRQLYP--------- 111 (160)
T ss_dssp ----CHHHHHHHTT---------C----S-EEEEEECT---------TSCH--HHHHHHH---HHHHHHTT---------
T ss_pred ----hHHHHHHHcC---------C----C-EEEEeCCc---------ccch--HHHHHHH---HhCcCCCC---------
Confidence 8999886543 1 2 79999872 3332 2222211 12222100
Q ss_pred HhhhcCCCEEEEcCCC-CCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHC
Q 026289 182 ILDKNKGNIKLVDELV-PNQISSTRIRDCICRGLSIKYLTEDKVIDYIRES 231 (240)
Q Consensus 182 ~l~~~~~~i~~l~~~~-~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~ 231 (240)
. -..+.++. .+ ...||||.||++++.|++++++||++|.+||++|
T Consensus 112 ---~-~~~i~~~~-~~~~~~ISST~IR~~l~~G~~~~~~vP~~V~~~I~~~ 157 (160)
T 1od6_A 112 ---G-LETLFILA-ATRYSFVSSTMVKEIARYGGDVSKLVPPATLRALKAK 157 (160)
T ss_dssp ---T-CEEEEEEC-CGGGTTCCHHHHHHHHHTTCCCTTTSCHHHHHHHHHH
T ss_pred ---C-CCEEEEeC-CCCCCcccHHHHHHHHHcCCChhHHCCHHHHHHHHHH
Confidence 0 02344554 33 3589999999999999999999999999999987
No 16
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=99.95 E-value=8.6e-28 Score=191.47 Aligned_cols=155 Identities=16% Similarity=0.189 Sum_probs=109.2
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCceeecccccc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEAN 100 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~~ 100 (240)
+++++|||||||+|.||+.+++.|.+.+ |+++++ ++. +++|+..++.++|++|+++++++ +++.|+.++.
T Consensus 5 m~i~i~~GsFDPiH~GHl~li~~A~~~~--d~viv~-----v~~-~~~K~~~~~~~~R~~m~~~~~~~-~~v~V~~~~~- 74 (162)
T 4f3r_A 5 KPIAIYPGTFDPLTNGHVDIIERALPLF--NKIIVA-----CAP-TSRKDPHLKLEERVNLIADVLTD-ERVEVLPLTG- 74 (162)
T ss_dssp CCEEEEEECCTTCCHHHHHHHHHHGGGC--SEEEEE-----ECC-C------CCHHHHHHHHHHHCCC-TTEEEEECCS-
T ss_pred eEEEEEEEEcCCCCHHHHHHHHHHHHHC--CcEEEE-----Eec-CCccCCCCCHHHHHHHHHHhhCC-CCEEEEeccc-
Confidence 5799999999999999999999999876 777643 232 34677889999999999999998 9999998873
Q ss_pred CCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhhch
Q 026289 101 QSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDN 180 (240)
Q Consensus 101 ~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~~~ 180 (240)
+++++++.+ . + -+|+.|.|++.++. + + .++.. ++|
T Consensus 75 -----l~~~~~~~~----~-----~-----~~~v~G~r~~~Df~----~-e---~~~a~------~nr------------ 109 (162)
T 4f3r_A 75 -----LLVDFAKTH----Q-----A-----NFILRGLRAVSDFD----Y-E---FQLAH------MNY------------ 109 (162)
T ss_dssp -----CHHHHHHHT----T-----C-----CEEEEEECSHHHHH----H-H---HHHHH------HHH------------
T ss_pred -----hHHHHHHHc----C-----C-----CEEEECCCchhhhh----h-H---HHHHH------HHH------------
Confidence 566665543 1 2 27999999998875 2 0 12221 111
Q ss_pred HHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHC
Q 026289 181 EILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRES 231 (240)
Q Consensus 181 ~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~ 231 (240)
.+...-..++++.......||||.||+.++.|.+|+++||+.|.+||+++
T Consensus 110 -~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g~~i~~~VP~~V~~~l~~~ 159 (162)
T 4f3r_A 110 -QLSPEIETIFLPAREGYSYVSGTMVREIVTLGGDVSPFVPPLVARHLQKR 159 (162)
T ss_dssp -HHCTTCEEEEEECCGGGSSCCHHHHHHHHHTTCCCTTTSCHHHHHHC---
T ss_pred -HhCCCccEEEEECCcccccccHHHHHHHHHcCCChhHhCCHHHHHHHHHH
Confidence 11111134555553334699999999999999999999999999999875
No 17
>1ej2_A Nicotinamide mononucleotide adenylyltransferase; dinucleotide binding fold, structural genomics, PSI; HET: NAD; 1.90A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.26.1.3 PDB: 1m8g_A* 1hyb_A* 1m8j_A* 1m8f_A* 1m8k_A*
Probab=99.94 E-value=7.1e-28 Score=195.48 Aligned_cols=157 Identities=13% Similarity=0.148 Sum_probs=116.0
Q ss_pred EEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCcccc-CCCCCHHHHHHHHHHHHhcCCceeecccccc
Q 026289 22 VVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKK-RGLISAEHRINLCNLACKSSDFIMVDPWEAN 100 (240)
Q Consensus 22 ~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k-~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~~ 100 (240)
+++++||||||+|+||+.+++.|.+.+ ++++++ .|+.++++| +..++.++|++|++.++.+.+ + +
T Consensus 4 ~~~i~~G~Fdp~H~GH~~l~~~a~~~~--d~v~v~----v~~~~~p~~~~~~~~~~~R~~~~~~a~~~~~-~--~----- 69 (181)
T 1ej2_A 4 MRGLLVGRMQPFHRGHLQVIKSILEEV--DELIIC----IGSAQLSHSIRDPFTAGERVMMLTKALSENG-I--P----- 69 (181)
T ss_dssp CEEEEEECCTTCCHHHHHHHHHHTTTC--SEEEEE----ECSTTCCSSSSSCSCHHHHHHHHHHHHHHTT-C--C-----
T ss_pred eEEEEEEEcCCcCHHHHHHHHHHHHhC--CeeEEE----ECCCCCCcCCCCCCCHHHHHHHHHHHHhhCC-C--C-----
Confidence 479999999999999999999998874 666543 345555554 357899999999999998765 2 0
Q ss_pred CCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhhch
Q 026289 101 QSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDN 180 (240)
Q Consensus 101 ~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~~~ 180 (240)
.+.++++|.|.+..... |.+. ++++...++++++.|++. ..
T Consensus 70 ----------------------------~~~v~v~~~d~~~~~~~---w~~~-~~~l~~~~~~~v~gr~~~--~~----- 110 (181)
T 1ej2_A 70 ----------------------------ASRYYIIPVQDIECNAL---WVGH-IKMLTPPFDRVYSGNPLV--QR----- 110 (181)
T ss_dssp ----------------------------GGGEEEEECCCCSCHHH---HHHH-HHHHSCCCSEEECCCHHH--HH-----
T ss_pred ----------------------------CCcEEEEecCccCCHHH---HHHH-HHHHCCCCCEEEECCHHH--HH-----
Confidence 02477888887766554 6542 466777888988887641 11
Q ss_pred HHhhhcCCCEEEEcCCCCC---CCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHCCCCC
Q 026289 181 EILDKNKGNIKLVDELVPN---QISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYL 235 (240)
Q Consensus 181 ~~l~~~~~~i~~l~~~~~~---~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~~LY~ 235 (240)
.+.. .++.++.. +.. .||||.||+.++.|++|+++||++|.+||++++||.
T Consensus 111 -~~~~--~~i~~~~~-~~~~~~~ISST~IR~~l~~G~~i~~lvP~~V~~yI~~~~l~~ 164 (181)
T 1ej2_A 111 -LFSE--DGYEVTAP-PLFYRDRYSGTEVRRRMLDDGDWRSLLPESVVEVIDEINGVE 164 (181)
T ss_dssp -HHHH--TTCCEECC-CCSSTTTSSHHHHHHHHHHTCCCGGGSCHHHHHHHHHTTHHH
T ss_pred -HHHh--CCeEEEec-CCCccCcCcHHHHHHHHHcCCChhHhCCHHHHHHHHHcCChH
Confidence 1211 23434432 223 499999999999999999999999999999999984
No 18
>3k9w_A Phosphopantetheine adenylyltransferase; niaid, ssgcid, seattle structural genomics center for infect disease, coenzyme A, COA; HET: 4PS ADE PG4; 1.60A {Burkholderia pseudomallei} PDB: 3ikz_A* 3pxu_A*
Probab=99.94 E-value=9.7e-27 Score=189.26 Aligned_cols=167 Identities=18% Similarity=0.215 Sum_probs=115.3
Q ss_pred hhcccccccCCceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhc
Q 026289 9 KLSLESKTQGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKS 88 (240)
Q Consensus 9 ~~~~~~~~~~~~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~ 88 (240)
.|+++.|..+. +++++++|||||+|+||+.+++.|.+.+ |+++++ +.. ++.|+.+++.++|++|++.++++
T Consensus 11 ~~~~~~~~~~~-mki~v~~GsFDpiH~GHl~li~~A~~~~--d~viv~---v~~---~p~K~~l~s~eeR~~ml~~~~~~ 81 (187)
T 3k9w_A 11 TLEAQTQGPGS-MVVAVYPGTFDPLTRGHEDLVRRASSIF--DTLVVG---VAD---SRAKKPFFSLEERLKIANEVLGH 81 (187)
T ss_dssp ---------CC-CCEEEEEECCTTCCHHHHHHHHHHHHHS--SEEEEE---EEC---CGGGCCSSCHHHHHHHHHHHHTT
T ss_pred hhhhhhcccCC-cEEEEEEEeCCcCcHHHHHHHHHHHHHC--CcEEEE---Eec---CCccCCCCCHHHHHHHHHHHhcc
Confidence 35555555433 5799999999999999999999999876 666543 221 24677889999999999999999
Q ss_pred CCceeeccccccCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeC
Q 026289 89 SDFIMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRR 168 (240)
Q Consensus 89 ~~~i~v~~~E~~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R 168 (240)
.+++.+++++ .+++++++.++ + .++|+|.|++.+|. +. .++.. ++|
T Consensus 82 v~~v~v~~f~------~~~~d~l~~l~---------~-----~~iv~G~r~~~Df~----~E----~~la~------~nr 127 (187)
T 3k9w_A 82 YPNVKVMGFT------GLLKDFVRAND---------A-----RVIVRGLRAVSDFE----YE----FQMAG------MNR 127 (187)
T ss_dssp CTTEEEEEES------SCHHHHHHHTT---------C-----SEEEEECCTTSCHH----HH----HHHHH------HHH
T ss_pred CCcEEEEech------hhHHHHHHHcC---------C-----CEEEECCCcccccc----hH----HHHHH------HHH
Confidence 9999998876 36777665431 2 28999999877654 21 11211 111
Q ss_pred CCCChhhhhhchHHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHHC
Q 026289 169 EGQDVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRES 231 (240)
Q Consensus 169 ~~~~~~~~~~~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~ 231 (240)
.+...-..+++........||||.||+.++.|++|++|||+.|.+||+++
T Consensus 128 -------------~l~~~ietv~l~~~~~~~~ISST~IRe~~~~g~~i~~lVP~~V~~~i~~k 177 (187)
T 3k9w_A 128 -------------YLLPDVETMFMTPSDQYQFISGTIVREIAQLGGDVSKFVFPSVEKWLTEK 177 (187)
T ss_dssp -------------HHCTTCEEEEECCCGGGTTCCHHHHHHHHHTTCCCTTTSCHHHHHHHHHH
T ss_pred -------------HhCCCCcEEEEecccccccccHHHHHHHHHcCCChhHHCCHHHHHHHHHH
Confidence 11111123444432224799999999999999999999999999999875
No 19
>1f9a_A Hypothetical protein MJ0541; alpha/beta, transferase, structural genomics; HET: ATP; 2.00A {Methanocaldococcus jannaschii} SCOP: c.26.1.3
Probab=99.94 E-value=5e-27 Score=188.31 Aligned_cols=152 Identities=16% Similarity=0.129 Sum_probs=106.9
Q ss_pred EEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccC-CCCCHHHHHHHHHHHHhcCC-ceeecccccc
Q 026289 23 VLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKR-GLISAEHRINLCNLACKSSD-FIMVDPWEAN 100 (240)
Q Consensus 23 i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~-~~~~~~~R~~Ml~~a~~~~~-~i~v~~~E~~ 100 (240)
+++|||||||+|+||+.+++.|.+.+ |+++++ +|+.++++|+ ..++.++|++|+++++++.+ ++.+.
T Consensus 2 i~i~~GsFdp~H~GH~~l~~~a~~~~--d~v~v~----v~~~~~p~~~~~~~~~~~R~~m~~~~~~~~~~~v~v~----- 70 (168)
T 1f9a_A 2 RGFIIGRFQPFHKGHLEVIKKIAEEV--DEIIIG----IGSAQKSHTLENPFTAGERILMITQSLKDYDLTYYPI----- 70 (168)
T ss_dssp EEEEEECCTTCCHHHHHHHHHHTTTC--SEEEEE----ECSTTCCSSSSCCSCHHHHHHHHHHHHTTSSCEEEEE-----
T ss_pred EEEEEEecCCcCHHHHHHHHHHHHhC--CeEEEE----EcCCCCCCCCCCCCCHHHHHHHHHHHHhcCCCceEEE-----
Confidence 79999999999999999999998874 676543 4566666553 57899999999999999876 44321
Q ss_pred CCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhhch
Q 026289 101 QSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDN 180 (240)
Q Consensus 101 ~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~~~ 180 (240)
+.|.+.... .|.+. ++++...++++++.|+.. ..
T Consensus 71 -----------------------------------~~d~l~~~~---~w~~~-~~~~~~~~~~~~~~~~~~--~~----- 104 (168)
T 1f9a_A 71 -----------------------------------PIKDIEFNS---IWVSY-VESLTPPFDIVYSGNPLV--RV----- 104 (168)
T ss_dssp -----------------------------------ECCCCSCGG---GHHHH-HHHHSCCCSEEECCCHHH--HH-----
T ss_pred -----------------------------------eeCCcccHH---HHHHH-HHHhccCCCEEEECcHHH--HH-----
Confidence 112222222 25432 345556667776665431 11
Q ss_pred HHhhhcCCCEEEEcCCCCCC---CCHHHHHHHHHcCCCCCCCCcHHHHHHHHHCCCCC
Q 026289 181 EILDKNKGNIKLVDELVPNQ---ISSTRIRDCICRGLSIKYLTEDKVIDYIRESRLYL 235 (240)
Q Consensus 181 ~~l~~~~~~i~~l~~~~~~~---iSST~IR~~l~~g~~i~~lvp~~V~~yI~~~~LY~ 235 (240)
.+.. .++.++. .+..+ ||||+||+.++.|++|+++||++|.+||+++++|.
T Consensus 105 -~~~~--~~i~~~~-~~~~~~~~ISST~IR~~~~~g~~i~~lvP~~V~~yI~~~~l~~ 158 (168)
T 1f9a_A 105 -LFEE--RGYEVKR-PEMFNRKEYSGTEIRRRMLNGEKWEHLVPKAVVDVIKEIKGVE 158 (168)
T ss_dssp -HHHH--TTCEEEC-CCCCSTTTSSHHHHHHHHHHTCCCGGGSCHHHHHHHHHHTHHH
T ss_pred -hhhh--cCcEEEe-CCccccCcccHHHHHHHHHcCCChhHcCCHHHHHHHHHcCChH
Confidence 1111 2455564 34344 99999999999999999999999999999999873
No 20
>3nv7_A Phosphopantetheine adenylyltransferase; helicobacter pylori 26695 strain, mutant I4V/N76Y, phosphopa adenylyltransferase; 1.75A {Helicobacter pylori} PDB: 3otw_A*
Probab=99.92 E-value=1.7e-26 Score=182.90 Aligned_cols=155 Identities=19% Similarity=0.243 Sum_probs=108.8
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCceeecccccc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEAN 100 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~~ 100 (240)
+++++|||||||+|+||+.+++.|.+.+ |++++. + +.+++|+..++.++|++|++.++++.+++.|+.++.
T Consensus 2 m~i~i~~GsFDPiH~GHl~ii~~A~~~~--D~viv~-----v-~~~~~K~~~~~~~eR~~ml~~a~~~~~~v~v~~~~~- 72 (157)
T 3nv7_A 2 QKVGIYPGTFDPVTNGHIDIIHRSSELF--EKLIVA-----V-AHSSAKNPMFSLDERLKMIQLATKSFKNVECVAFEG- 72 (157)
T ss_dssp -CEEEEEECCTTCCHHHHHHHHHHHTTS--SEEEEE-----E-ECCGGGCCSSCHHHHHHHHHHHHTTSTTEEEEEECS-
T ss_pred CEEEEEEEEcCCCCHHHHHHHHHHHHhC--CceEEE-----E-ccCCCCCCCCCHHHHHHHHHHHhcCCCcEEEEecCc-
Confidence 4689999999999999999999999976 676543 1 223467788999999999999999999999988752
Q ss_pred CCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCCChhhhhhch
Q 026289 101 QSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQDVEKIISDN 180 (240)
Q Consensus 101 ~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~~~~~~~~~~ 180 (240)
.+++.++. ++ |+ +++.|.++..++. |. .++.. .+|.
T Consensus 73 -----l~~~~~~~----~~-----~~-----~ivrG~r~~~D~~----ye----~~~a~------~n~~----------- 108 (157)
T 3nv7_A 73 -----LLAYLAKE----YH-----CK-----VLVRGLRVVSDFE----YE----LQMGY------ANKS----------- 108 (157)
T ss_dssp -----CHHHHHHH----TT-----CC-----CBCCCCSCCCCHH----HH----HHHHH------HHHH-----------
T ss_pred -----hHHHHHHH----cC-----CC-----EEEECCcccchhh----hh----HHHHH------HHHH-----------
Confidence 34444333 21 32 7999988766653 21 12111 1111
Q ss_pred HHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCCCCcHHHHHHHHH
Q 026289 181 EILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKYLTEDKVIDYIRE 230 (240)
Q Consensus 181 ~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~lvp~~V~~yI~~ 230 (240)
|...-+.+++........||||.||+.+..|.+|+++||+.|.++|++
T Consensus 109 --l~~~ietv~l~~~~~~~~iSSt~vRe~~~~ggdv~~~VP~~V~~~l~~ 156 (157)
T 3nv7_A 109 --LNHELETLYFMPTLQNAFISSSIVRSIIAHKGDASHLVPKEIYPLISK 156 (157)
T ss_dssp --SSCCCCCCCCCCCHHHHTCCHHHHHHHHHTTCCCTTTSCTTTHHHHCC
T ss_pred --hCCCceEEEEcCCcccceeeHHHHHHHHHcCCChHHhCCHHHHHHHhh
Confidence 100012333332212358999999999999999999999999999865
No 21
>1jhd_A Sulfate adenylyltransferase; sulfurylase, APS, chemoautotroph, bromide; 1.70A {Sulfur-oxidizing endosymbiont ofriftia pachyptila} SCOP: b.122.1.3 c.26.1.5
Probab=99.92 E-value=4.2e-25 Score=197.89 Aligned_cols=176 Identities=15% Similarity=0.133 Sum_probs=133.6
Q ss_pred ceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcC-Cc----eee
Q 026289 20 TYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSS-DF----IMV 94 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~-~~----i~v 94 (240)
..+++ ||||||+|+||+.|++.|++.+++|+++++| ...+ +|...++.+.|++|+++++++. |. +.+
T Consensus 193 ~~Vva--fqTrNPiHrgH~~l~~~Ale~~~~D~vll~P-----~~g~-~K~~di~~~~R~~~~~~~~~~~~p~~~v~l~~ 264 (396)
T 1jhd_A 193 SKVVA--FQTRNPMHRAHEELCRMAMESLDADGVVVHM-----LLGK-LKKGDIPAPVRDAAIRTMAEVYFPPNTVMVTG 264 (396)
T ss_dssp SSEEE--EEESSCCCHHHHHHHHHHHHHHTCSEEEEEE-----EECC-CCTTCCCHHHHHHHHHHHHHHHSCTTCEEEEE
T ss_pred ceEEE--eccCCCCchHHHHHHHHHHHHcCCCeEEEEE-----CCCC-CCCCCCCHHHHHHHHHHHHHhcCCCcceEEEe
Confidence 34555 8999999999999999999999888877554 3333 6777899999999999999984 65 777
Q ss_pred ccccccCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhh--hhcCCCCCCChhhHHHHhhc--------ccEE
Q 026289 95 DPWEANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLL--ESFAIPGFWMPEQVWTICRN--------FGVI 164 (240)
Q Consensus 95 ~~~E~~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l--~~l~~~~~w~~~~~~~l~~~--------~~~v 164 (240)
.+++....|+++|+ +..+..++ + +++ +||+|.|.+ .+|. .|+++ ++|++. +.++
T Consensus 265 ~p~~m~~aGPreai--lhaiirkn------~--G~t-~fIVGrDhag~~~~y---~~~~a--q~il~~~~~~~~l~i~iv 328 (396)
T 1jhd_A 265 YGFDMLYAGPREAV--LHAYFRQN------M--GAT-HFIIGRDHAGVGDYY---GAFDA--QTIFDDEVPEGAMEIEIF 328 (396)
T ss_dssp EECCCCCCTHHHHH--HHHHHHHH------T--TCS-EEEECTTTTCCTTCS---CTTHH--HHHHHHTSCTTSCSCEEE
T ss_pred chHHhhcCCchHHH--HHHHHHHc------C--CCc-EEEECCCCCCccccC---CcchH--HHHHHhcccccccceeEE
Confidence 88888889999887 44333333 2 256 999999997 6666 48775 888875 5788
Q ss_pred EEeCCCCChhhhhhchHHhhhcCCCEEEEcC------CCCCCCCHHHHHHHHHcCCC-CCCCCcHHHHHHHHHC
Q 026289 165 CIRREGQDVEKIISDNEILDKNKGNIKLVDE------LVPNQISSTRIRDCICRGLS-IKYLTEDKVIDYIRES 231 (240)
Q Consensus 165 v~~R~~~~~~~~~~~~~~l~~~~~~i~~l~~------~~~~~iSST~IR~~l~~g~~-i~~lvp~~V~~yI~~~ 231 (240)
++.|.++.... ..+..++. .....||||+||+++++|.. +..++|++|++||+++
T Consensus 329 ~~~~~~Y~~~~------------~~~~~~~~~p~~~~~~~~~ISgT~IR~~L~~G~~pP~~f~~peV~~~I~~~ 390 (396)
T 1jhd_A 329 RADHTAYSKKL------------NKIVMMRDVPDHTKEDFVLLSGTKVREMLGQGIAPPPEFSRPEVAKILMDY 390 (396)
T ss_dssp ECCCEEEETTT------------TEEEEGGGCTTCCGGGEECCCHHHHHHHHHTTCCCCTTTCCHHHHHHHHHH
T ss_pred ecccceecCCC------------CeEEEccccCcccCCCccccCHHHHHHHHHCCCCCCcccCCHHHHHHHHHh
Confidence 88887653211 22333321 12468999999999999984 5789999999999874
No 22
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.91 E-value=9.5e-25 Score=192.39 Aligned_cols=161 Identities=19% Similarity=0.224 Sum_probs=114.6
Q ss_pred CceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCcc-ccCCCCCHHHHHHHHHHHHhcCCceeeccc
Q 026289 19 KTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAY-KKRGLISAEHRINLCNLACKSSDFIMVDPW 97 (240)
Q Consensus 19 ~~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~-~k~~~~~~~~R~~Ml~~a~~~~~~i~v~~~ 97 (240)
+.+++++|||||||+|+||+.+++.|.+.+ |+++++ +|+++++ .|+.+++.++|++|+++++++.+
T Consensus 5 ~~~~~~i~~G~FdP~H~GH~~li~~a~~~~--d~v~v~----v~~~~~p~~~~~~~~~~~R~~m~~~~~~~~~------- 71 (341)
T 2qjo_A 5 TKYQYGIYIGRFQPFHLGHLRTLNLALEKA--EQVIII----LGSHRVAADTRNPWRSPERMAMIEACLSPQI------- 71 (341)
T ss_dssp SSEEEEEEEECCTTCCHHHHHHHHHHHHHE--EEEEEE----EEEETCCCCSSSCSCHHHHHHHHHTTSCHHH-------
T ss_pred ceeeEEEEEEEeCCCCHHHHHHHHHHHHhC--CeEEEE----ECCcccCCCCCCCCCHHHHHHHHHHHhhhcc-------
Confidence 346899999999999999999999999987 666542 3333333 34568999999999998875421
Q ss_pred cccCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhc-----ccEEEEeCCCCC
Q 026289 98 EANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRN-----FGVICIRREGQD 172 (240)
Q Consensus 98 E~~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~-----~~~vv~~R~~~~ 172 (240)
. .++++++|.|.+.++.. |.+. ++++++. +.++++.++...
T Consensus 72 --------------------~----------~~~~~i~~~d~~~~~~~---w~~~-~~~l~~~l~r~~~~~~~~g~~~~~ 117 (341)
T 2qjo_A 72 --------------------L----------KRVHFLTVRDWLYSDNL---WLAA-VQQQVLKITGGSNSVVVLGHRKDA 117 (341)
T ss_dssp --------------------H----------TTEEEEEEECCTTCHHH---HHHH-HHHHHHHHHTTCSCEEEEECCCSG
T ss_pred --------------------C----------CeEEEEECCCCcCChHH---HHHH-HHHHhHHhcCCCceEEEEcCCCCC
Confidence 1 24899999999888875 6553 2456555 567777655421
Q ss_pred hhhhhhchHHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCCCCCC--CCcHHHHHHHHHCCC
Q 026289 173 VEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGLSIKY--LTEDKVIDYIRESRL 233 (240)
Q Consensus 173 ~~~~~~~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~~i~~--lvp~~V~~yI~~~~L 233 (240)
... ..... .++.++.-....+||||.||+.++.|+++++ +||++|.+||.++++
T Consensus 118 ~~~------~~~~~-~~~~~~~~~~~~~iSST~IR~~l~~g~~~~~~~lvp~~v~~~i~~~~~ 173 (341)
T 2qjo_A 118 SSY------YLNLF-PQWDYLETGHYPDFSSTAIRGAYFEGKEGDYLDKVPPAIADYLQTFQK 173 (341)
T ss_dssp GGG------GGGSC-TTSEEEECCCCTTCCHHHHHHHHHHTCGGGTTTTSCHHHHHHHHHHTT
T ss_pred ChH------HHHhc-cccceeecccCCCCCcHHHHHHHHcCCCcchhhhCCHHHHHHHHHhcc
Confidence 111 11111 2344443222579999999999999988555 999999999998865
No 23
>1v47_A ATP sulfurylase; product binding complex, zinc, riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; HET: ADX; 2.49A {Thermus thermophilus} SCOP: b.122.1.3 c.26.1.5
Probab=99.91 E-value=3.1e-24 Score=189.70 Aligned_cols=174 Identities=16% Similarity=0.111 Sum_probs=133.1
Q ss_pred ceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcC-Cc----eee
Q 026289 20 TYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSS-DF----IMV 94 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~-~~----i~v 94 (240)
+.+++ .|||||+|+||..|++.|++. .|.+++ .|...+ +|...++.+.|++|+++++++. |. +.+
T Consensus 156 ~~Vva--fqTrNPiHrgH~~l~~~ale~--~d~vll-----~P~~g~-~K~~d~~~~~R~~~~~~~i~~~~p~~~~~l~~ 225 (349)
T 1v47_A 156 RKVVA--FQTRNAPHRAHEYLIRLGLEL--ADGVLV-----HPILGA-KKPDDFPTEVIVEAYQALIRDFLPQERVAFFG 225 (349)
T ss_dssp CSEEE--EEESSCCCHHHHHHHHHHHHH--SSEEEE-----EEBCSC-CCTTSCCHHHHHHHHHHHHHHHSCGGGEEECC
T ss_pred CeEEE--eecCCCCchHHHHHHHHHHHh--CCcEEE-----EECCCC-CCCCCCCHHHHHHHHHHHHhhcCCCcceEEEe
Confidence 44555 599999999999999999996 477764 444433 5778899999999999999986 76 667
Q ss_pred ccccccCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhh--hhcCCCCCCChhhHHHHhhcc-----cEEEEe
Q 026289 95 DPWEANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLL--ESFAIPGFWMPEQVWTICRNF-----GVICIR 167 (240)
Q Consensus 95 ~~~E~~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l--~~l~~~~~w~~~~~~~l~~~~-----~~vv~~ 167 (240)
.+++....|+++|+ +..+.+++ ++ +. +||+|.|.+ .++- .|+++ ++|++.+ .++++.
T Consensus 226 ~p~~m~~aGPreai--lhaiirkn------~G--~t-~fIVGrDhag~~~~y---~~~~a--q~i~~~~~~l~i~~v~~~ 289 (349)
T 1v47_A 226 LATPMRYAGPKEAV--FHALVRKN------FG--AT-HFLVGRDHAGVGDFY---DPYAA--HRIFDRLPPLGIEIVKVG 289 (349)
T ss_dssp BCSCCCCCTHHHHH--HHHHHHHH------TT--CS-EEEECTTTTCSTTCS---CTTHH--HHGGGGSCCCSSEEEECC
T ss_pred chHHhhcCCcHHHH--HHHHHHHc------CC--Cc-EEEECcCCCCccccc---CcccH--HHHHHhhhhcCceEEecc
Confidence 88888889999885 66654444 22 55 999999998 6665 48775 8999987 788888
Q ss_pred CCCCChhhhhhchHHhhhcCCCEEEEcC------CCCCCCCHHHHHHHHHcCCC-CCCCCcHHHHHHHHHC
Q 026289 168 REGQDVEKIISDNEILDKNKGNIKLVDE------LVPNQISSTRIRDCICRGLS-IKYLTEDKVIDYIRES 231 (240)
Q Consensus 168 R~~~~~~~~~~~~~~l~~~~~~i~~l~~------~~~~~iSST~IR~~l~~g~~-i~~lvp~~V~~yI~~~ 231 (240)
|.++.... ..+..++. ....+||||+||+++++|.. ...++|++|++||++.
T Consensus 290 ~~~Y~~~~------------~~~~~~~~~p~~~~~~~~~ISgT~iR~~L~~G~~pp~~f~~peV~~~I~~~ 348 (349)
T 1v47_A 290 AVFHCPLC------------GGIASERTCPEGHREKRTAISMTKVRALLREGKAPPSELVRPELLPILRRG 348 (349)
T ss_dssp CEEEETTT------------TEEEETTTSCGGGGGGCEECCHHHHHHHHHTTCCCCTTTSCGGGHHHHHTT
T ss_pred ccEEcccC------------CceEEccccCccCCCcccccCHHHHHHHHHCcCCCchhcCCHHHHHHHHhh
Confidence 87653211 23333321 22478999999999999985 5789999999999874
No 24
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.87 E-value=3.6e-22 Score=176.79 Aligned_cols=160 Identities=11% Similarity=0.056 Sum_probs=107.9
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccc-cCCCCCHHHHHHHHHHHHhcCCceeeccccc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYK-KRGLISAEHRINLCNLACKSSDFIMVDPWEA 99 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~-k~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~ 99 (240)
+++|||||||||+|+||+.+++.|.+.+ |+++++ ++++++++ |+..+|+++|++|+++++++.+
T Consensus 7 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~--d~~~~~----v~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~--------- 71 (352)
T 2qjt_B 7 YDISVFIGRFQPFHKGHLHNIIIALQNS--KKVIIN----IGSCFNTPNIKNPFSFEQRKQMIESDLQVAG--------- 71 (352)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHHSE--EEEEEE----EEEESCCCCSSSCSCHHHHHHHHHHHHHHTT---------
T ss_pred ccEEEEEEecCCCChHHHHHHHHHHHhC--CcEEEE----ECCCCCCcccCCCCCHHHHHHHHHHHhcccc---------
Confidence 5799999999999999999999999975 666543 33333333 4568999999999999997642
Q ss_pred cCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhc----ccEEEEeCCCCChhh
Q 026289 100 NQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRN----FGVICIRREGQDVEK 175 (240)
Q Consensus 100 ~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~----~~~vv~~R~~~~~~~ 175 (240)
+ |+ .+++++.|.|.+..... |.+.--+.+.+. ..++++.|.......
T Consensus 72 ------------------~------~~--~~~~~~~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ig~~~~~~~~ 122 (352)
T 2qjt_B 72 ------------------I------DL--DTVVIEPLADYFYQEQK---WQDELRKNVYKHAKNNNSIAIVGHIKDSSSY 122 (352)
T ss_dssp ------------------C------CG--GGEEEEEEECCTTCHHH---HHHHHHHHHTTTSCSSCCEEECCBSSSSHHH
T ss_pred ------------------C------cc--ceEEEEEcCCCcCChHH---HHHHHHHHHHHhcccCCeEEEEcCCCCcchh
Confidence 1 11 35788888887766664 654311223322 466666665422111
Q ss_pred hhhchHHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHc-C--CC-CCCCCcH-HHHHHHHHC
Q 026289 176 IISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICR-G--LS-IKYLTED-KVIDYIRES 231 (240)
Q Consensus 176 ~~~~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~-g--~~-i~~lvp~-~V~~yI~~~ 231 (240)
. + .....+..+.......||||.||+.+.. | .+ |+++||+ +|.+||.+.
T Consensus 123 ~------~-~~~~~~~~~~~~~~~~iSST~IR~~~~~~g~~~~~i~~lvP~~~va~~I~~w 176 (352)
T 2qjt_B 123 Y------I-RSFPEWDYIGVDNYKNFNATEFRQKFYNGIISKQYMCSNDPKLGTYNFLTKF 176 (352)
T ss_dssp H------H-HHCTTSEECCBCCTTCCCHHHHHHHHHTTCCCGGGCSCSSTTSHHHHHHHHH
T ss_pred h------h-hcCCccceeccCCCCCCCchHHHHHHhccCcccchhhhcCChHHHHHHHHHH
Confidence 1 1 1111233332223467999999999997 8 77 9999999 999999864
No 25
>2b7l_A Glycerol-3-phosphate cytidylyltransferase; rossmann fold; 3.00A {Staphylococcus aureus}
Probab=99.76 E-value=1e-18 Score=134.25 Aligned_cols=95 Identities=16% Similarity=0.219 Sum_probs=64.1
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCceeecccccc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEAN 100 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~~ 100 (240)
|++++++|+|||+|.||+.+++.|.+.. +.++++.. +.|....+.|..+++.++|++|++ ++.+.+.+.+
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~--~~~~v~v~-~~~~~~~~~~~~l~~~~eR~~~l~-~~~~~d~v~~------ 70 (132)
T 2b7l_A 1 MKRVITYGTYDLLHYGHIELLRRAREMG--DYLIVALS-TDEFNQIKHKKSYYDYEQRKMMLE-SIRYVDLVIP------ 70 (132)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHHTS--SEEEEEEE-CHHHHHHTTCCCSSCHHHHHHHHH-TBTTCCEEEE------
T ss_pred CeEEEEeeecCcCCHHHHHHHHHHHHhC--CcEEEEEE-CCHHHhccCCCCCCCHHHHHHHHH-hcCCCCEEEE------
Confidence 3579999999999999999999999876 44544321 122100123345789999999999 6766666654
Q ss_pred CCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchh
Q 026289 101 QSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDL 139 (240)
Q Consensus 101 ~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~ 139 (240)
+.+++ ++++.+++.. | + ++++|.|.
T Consensus 71 --~~~~~-~~~~~~~~~~------~----~-~iv~G~D~ 95 (132)
T 2b7l_A 71 --EKGWG-QKEDDVEKFD------V----D-VFVMGHDW 95 (132)
T ss_dssp --ECCGG-GHHHHHHHTT------C----C-EEEECGGG
T ss_pred --CCChH-HHHHHHHHcC------C----C-EEEECCCC
Confidence 22344 5666665433 3 2 58899997
No 26
>1coz_A Protein (glycerol-3-phosphate cytidylyltransferase); HET: CTP; 2.00A {Bacillus subtilis} SCOP: c.26.1.2 PDB: 1n1d_A*
Probab=99.74 E-value=2.4e-18 Score=131.56 Aligned_cols=95 Identities=17% Similarity=0.198 Sum_probs=63.2
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCceeecccccc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEAN 100 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~~ 100 (240)
|++++++|+|||+|.||+.+++.|.+.. ++++++.. +.|....+.+..+++.++|++|++ ++.+.+.+.+.
T Consensus 1 m~~~~~~G~FDp~H~GH~~li~~a~~~~--d~~~v~v~-~~~~~~~~~~~~l~~~~eR~~~l~-~~~~~d~v~~~----- 71 (129)
T 1coz_A 1 MKKVITYGTFDLLHWGHIKLLERAKQLG--DYLVVAIS-TDEFNLQKQKKAYHSYEHRKLILE-TIRYVDEVIPE----- 71 (129)
T ss_dssp CCEEEEEECCCSCCHHHHHHHHHHHTTS--SEEEEEEE-CHHHHHHHTCCCSSCHHHHHHHHT-TBTTCCEEEEE-----
T ss_pred CcEEEEEEeCCCCCHHHHHHHHHHHHhC--CCeEEEEE-CCHHHhcCCCCCCCCHHHHHHHHH-hcCCCCEEEeC-----
Confidence 3579999999999999999999999865 56654421 111000112346889999999999 67666655431
Q ss_pred CCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchh
Q 026289 101 QSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDL 139 (240)
Q Consensus 101 ~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~ 139 (240)
.+++ ++++.+++ ++ + + ++++|.|.
T Consensus 72 ---~~~~-~~~~~l~~-~~-----~----~-~iv~G~D~ 95 (129)
T 1coz_A 72 ---KNWE-QKKQDIID-HN-----I----D-VFVMGDDW 95 (129)
T ss_dssp ---CCST-THHHHHHH-TT-----C----S-EEEEEGGG
T ss_pred ---CCHH-HHHHHHHH-hC-----C----c-EEEECCCC
Confidence 2333 45555543 32 2 3 78999996
No 27
>1lw7_A Transcriptional regulator NADR; NMN, NMN adenylyl transferase, ribosylnicotinamide KINA transferase; HET: NAD; 2.90A {Haemophilus influenzae} SCOP: c.26.1.3 c.37.1.1
Probab=99.71 E-value=4.6e-18 Score=151.50 Aligned_cols=73 Identities=19% Similarity=0.211 Sum_probs=60.6
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccc-----c----CCCCCHHHHHHHHHHHHhcCCc
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYK-----K----RGLISAEHRINLCNLACKSSDF 91 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~-----k----~~~~~~~~R~~Ml~~a~~~~~~ 91 (240)
+++|+|||||||+|+||+.+++.|.+.+ |+++|+ |++++++ | ++.++.++|++|++.++++.++
T Consensus 2 ~~~~i~~GtFdP~h~GHl~~~~~a~~~~--d~v~v~-----~~~~~~~~~~~~~~~~~~~~~~~~~R~~m~~~~~~~~~~ 74 (365)
T 1lw7_A 2 KKVGVIFGKFYPVHTGHINMIYEAFSKV--DELHVI-----VCSDTVRDLKLFYDSKMKRMPTVQDRLRWMQQIFKYQKN 74 (365)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTC--SEEEEE-----EEECHHHHHHHHHHTTCSSCCCHHHHHHHHHHHTSTTTT
T ss_pred CcEEEEEEeeCCCCHHHHHHHHHHHHHC--CEEEEE-----ECCCCccccccccccccCCCCCHHHHHHHHHHHhhcCCC
Confidence 3689999999999999999999999975 888755 3444443 1 3469999999999999999998
Q ss_pred -eeecccccc
Q 026289 92 -IMVDPWEAN 100 (240)
Q Consensus 92 -i~v~~~E~~ 100 (240)
+.|+.++..
T Consensus 75 ~~~v~~~~~~ 84 (365)
T 1lw7_A 75 QIFIHHLVED 84 (365)
T ss_dssp TEEEEEEECS
T ss_pred cEEEEEeccC
Confidence 999988764
No 28
>3do8_A Phosphopantetheine adenylyltransferase; protein with unknown function, structural genomics, MCSG, PSI-2, protein structure initiative; 1.60A {Archaeoglobus fulgidus}
Probab=99.52 E-value=4.3e-15 Score=116.30 Aligned_cols=70 Identities=11% Similarity=0.078 Sum_probs=54.8
Q ss_pred EEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccc-c--CCCCCHHHHHHHHHHHH-hcC-Cceeeccc
Q 026289 23 VLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYK-K--RGLISAEHRINLCNLAC-KSS-DFIMVDPW 97 (240)
Q Consensus 23 i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~-k--~~~~~~~~R~~Ml~~a~-~~~-~~i~v~~~ 97 (240)
.++|||||||+|.||+.+++.|.+. ++|+++++ |+.++++ | +..+++++|++|+++++ ++. +.+.+..+
T Consensus 2 ~~i~gGtFDPiH~GHl~l~~~a~~~-~~d~viv~-----v~~~~~~~k~~~~~~~~~~R~~ml~~a~~~~~~~~~~i~~i 75 (148)
T 3do8_A 2 KVALGGTFEPLHEGHKKLIDVAIKL-GGRDITIG-----VTSDRMARARIRSVLPFAIRAENVKRYVMRKYGFEPEIVKI 75 (148)
T ss_dssp CEEEEECCSSCCHHHHHHHHHHHHH-HTTCEEEE-----EECHHHHHHHSCCCSCHHHHHHHHHHHHHHHHSSCCEEEEE
T ss_pred EEEEEeeCCCCCHHHHHHHHHHHHh-CCCEEEEE-----ECCCccccccCCCCCCHHHHHHHHHHHHhcccCCcEEEEee
Confidence 4789999999999999999999887 66888754 4555554 3 46899999999999999 764 34555554
Q ss_pred c
Q 026289 98 E 98 (240)
Q Consensus 98 E 98 (240)
+
T Consensus 76 ~ 76 (148)
T 3do8_A 76 T 76 (148)
T ss_dssp C
T ss_pred c
Confidence 4
No 29
>3glv_A Lipopolysaccharide core biosynthesis protein; structural GEN PSI, MCSG, protein structure initiative; HET: AMP; 1.99A {Thermoplasma volcanium GSS1}
Probab=99.44 E-value=7.8e-14 Score=108.46 Aligned_cols=67 Identities=16% Similarity=0.261 Sum_probs=46.5
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccc---cCCCCCHHHHHHHHHHHHhcCCceee
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYK---KRGLISAEHRINLCNLACKSSDFIMV 94 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~---k~~~~~~~~R~~Ml~~a~~~~~~i~v 94 (240)
|++++++|+|||+|.||+.+++.|.+.. +.+.++ +.....+. ++.+++.++|++|++. +...+.+.+
T Consensus 2 m~~v~~~G~FD~vH~GH~~li~~a~~~~--~~~~v~----v~~~~~~~~~~~~~l~~~~eR~~~l~~-~~~vd~v~~ 71 (143)
T 3glv_A 2 MIRVMATGVFDILHLGHIHYLKESKKLG--DELVVV----VARDSTARNNGKIPIFDENSRLALISE-LKVVDRAIL 71 (143)
T ss_dssp CCEEEEEECCSSCCHHHHHHHHHHHTTS--SEEEEE----ECCHHHHHHTTCCCSSCHHHHHHHHTT-BTTCSEEEE
T ss_pred ceEEEEEeecCCCCHHHHHHHHHHHHhC--CCcEEE----EECCcchhhcCCCCCCCHHHHHHHHHh-cCCCCEEEE
Confidence 5689999999999999999999998865 344332 12222211 3467899999999986 333444444
No 30
>3hl4_A Choline-phosphate cytidylyltransferase A; rossmann fold, phospholipid synthesis, phosphatidylcholine, phosphocholine, CTP, CDP-choline; HET: CDC; 2.20A {Rattus norvegicus}
Probab=99.37 E-value=1.8e-12 Score=107.85 Aligned_cols=73 Identities=21% Similarity=0.233 Sum_probs=51.8
Q ss_pred ccCCceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCc---ccc-CCCCCHHHHHHHHHHHHhcCCc
Q 026289 16 TQGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDA---YKK-RGLISAEHRINLCNLACKSSDF 91 (240)
Q Consensus 16 ~~~~~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~---~~k-~~~~~~~~R~~Ml~~a~~~~~~ 91 (240)
.+...+++++++|+|||+|.||+.+++.|.+.++.|.+.| + +. .+. ..| ...++.++|++|++. +...+.
T Consensus 71 ~~~~~~~~V~~~GtFD~~H~GHl~iL~rAk~lf~gD~LIV-g--V~--~D~~v~~~Kg~pi~s~eER~e~v~~-~k~VD~ 144 (236)
T 3hl4_A 71 TPCERPVRVYADGIFDLFHSGHARALMQAKNLFPNTYLIV-G--VC--SDELTHNFKGFTVMNENERYDAVQH-CRYVDE 144 (236)
T ss_dssp CCTTSCEEEEEEECCTTCCHHHHHHHHHHHTSSSSEEEEE-E--EC--CHHHHHHHTCCCSSCHHHHHHHHHT-BTTCSE
T ss_pred CCCCCCeEEEEeccCCCCCHHHHHHHHHHHHhcCCCeEEE-E--Ec--ccHHHhhcCCCCCCCHHHHHHHHHH-hCCCCe
Confidence 3455678899999999999999999999998653355543 2 22 222 124 368999999999994 555455
Q ss_pred eee
Q 026289 92 IMV 94 (240)
Q Consensus 92 i~v 94 (240)
+.+
T Consensus 145 Vvv 147 (236)
T 3hl4_A 145 VVR 147 (236)
T ss_dssp EES
T ss_pred EEE
Confidence 544
No 31
>1r6x_A ATP:sulfate adenylyltransferase; APS kinase-like domain; 1.40A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5
Probab=99.22 E-value=1.5e-10 Score=103.30 Aligned_cols=172 Identities=19% Similarity=0.199 Sum_probs=111.6
Q ss_pred ceEEEEEcCCCCchhHHH-HHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCc--e--ee
Q 026289 20 TYVVLVATGSFNPPTFMH-LRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDF--I--MV 94 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GH-l~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~--i--~v 94 (240)
..+++ ..++||+|+|| ..+.+.|++. .+.++ +.|.-- +.|.+.++.+-|++..+.+++..|. + .+
T Consensus 188 ~~Vva--fqtrNP~HraH~e~~~r~a~e~--~~~ll-----lhPlvG-~tK~~Dip~~vR~~~~~~~l~~yp~~~v~l~~ 257 (395)
T 1r6x_A 188 DRVVA--FQTRNPMHRAHRELTVRAAREA--NAKVL-----IHPVVG-LTKPGDIDHHTRVRVYQEIIKRYPNGIAFLSL 257 (395)
T ss_dssp CCEEE--ECCSSCCCHHHHHHHHHHHHHT--TCEEE-----ECCBCS-BCCTTCCCHHHHHHHHHHHGGGSSTTCEEECC
T ss_pred CcEEE--eccCCCcchhhHHHHHHHHHHc--CCcEE-----EEECCC-CCCCCCCCHHHHHHHHHHHHHhCCCccEEEEe
Confidence 44666 47999999999 5666666653 24444 344322 3566789999999999999998764 3 34
Q ss_pred ccccccCCCccChHHHHHH-HHHHHhhhccCCCCCceEEEEEcchhhh--------hcCCCCCCChhhHHHHhhcc----
Q 026289 95 DPWEANQSGYQRTLTVLSR-VKNFLIEAGLISTESLKVMLVCGSDLLE--------SFAIPGFWMPEQVWTICRNF---- 161 (240)
Q Consensus 95 ~~~E~~~~~~~~t~~tl~~-l~~~~~~~~~~p~~~~~~~fl~G~D~l~--------~l~~~~~w~~~~~~~l~~~~---- 161 (240)
-++...-.|+...+ +.. +++.|+ +. .||+|-|... ++= .|++ .++++..+
T Consensus 258 ~p~~mryAGPrEai--~HAiiRkN~G---------ct-hfIVGRDhAG~g~~~~~~d~Y---~~~~--aq~i~~~~~~el 320 (395)
T 1r6x_A 258 LPLAMRMSGDREAV--WHAIIRKNYG---------AS-HFIVGRDHAGPGKNSKGVDFY---GPYD--AQELVESYKHEL 320 (395)
T ss_dssp BCCBCCCCHHHHHH--HHHHHHHHTT---------CS-EEEECTTTTCCCBCTTSCBSS---CTTH--HHHHHHHHHHHH
T ss_pred cchhhhhcCcHHHH--HHHHHHHHcC---------Cc-eEEECCCCCCCCCCCcccccC---Ccch--HHHHHHhchhcc
Confidence 44444456665443 333 445552 33 8999999876 332 2444 47887754
Q ss_pred --cEEEEeCCCCChhhhhhchHHhhhcCCCEEEEcCC-----CCCCCCHHHHHHHHHcCCCC-CCCCcHHHHHHHHH
Q 026289 162 --GVICIRREGQDVEKIISDNEILDKNKGNIKLVDEL-----VPNQISSTRIRDCICRGLSI-KYLTEDKVIDYIRE 230 (240)
Q Consensus 162 --~~vv~~R~~~~~~~~~~~~~~l~~~~~~i~~l~~~-----~~~~iSST~IR~~l~~g~~i-~~lvp~~V~~yI~~ 230 (240)
.++.+..--+.... ..+...+.. ....||+|.||++++.|..+ ..++.++|++.+.+
T Consensus 321 ~I~~v~f~~~~Y~~~~------------~~~~~~~~~p~~~~~~~~iSGT~~R~~L~~G~~pP~~f~rpeV~~iL~~ 385 (395)
T 1r6x_A 321 DIEVVPFRMVTYLPDE------------DRYAPIDQIDTTKTRTLNISGTELRRRLRVGGEIPEWFSYPEVVKILRE 385 (395)
T ss_dssp TCEEEECCCEEEEGGG------------TEEEETTTSCSSSCCCBCCCHHHHHHHHHHTCCCCTTTSCHHHHHHHTT
T ss_pred CceEEEecceEEeccc------------CeEEEcccCCCCccceEccCHHHHHHHHHCcCCCCcccCCHHHHHHHHH
Confidence 45555443322110 223233211 24689999999999999887 77999999998877
No 32
>1g8f_A Sulfate adenylyltransferase; alpha-beta protein, beta-barrel, rossmann-fold, kinase fold; 1.95A {Saccharomyces cerevisiae} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1g8g_A* 1g8h_A* 1j70_A 1jec_A 1jed_A* 1jee_A*
Probab=99.10 E-value=7.4e-10 Score=102.45 Aligned_cols=172 Identities=19% Similarity=0.194 Sum_probs=112.1
Q ss_pred ceEEEEEcCCCCchhHHH-HHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCc----eee
Q 026289 20 TYVVLVATGSFNPPTFMH-LRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDF----IMV 94 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GH-l~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~----i~v 94 (240)
+.+++ ..++||+|+|| ..+.+.|.+.. +.+++. |.-- +.|.+.++.+-|++..+.+++..|. +.+
T Consensus 189 ~~v~a--fqtrnP~HraH~e~~~~~a~e~~--~~lll~-----pl~g-~~k~~di~~~~r~~~~~~~~~~yp~~~~~l~~ 258 (511)
T 1g8f_A 189 DRVVA--FQTRNPMHRAHRELTVRAAREAN--AKVLIH-----PVVG-LTKPGDIDHHTRVRVYQEIIKRYPNGIAFLSL 258 (511)
T ss_dssp CCEEE--EEESSCCCHHHHHHHHHHHHHHT--CEEEEE-----EBCS-BCSTTCCCHHHHHHHHHHHGGGSCTTSEEECC
T ss_pred CcEEE--EecCCCCchHHHHHHHHHHHHcC--CcEEEE-----ECCC-CCCCCCCCHHHHHHHHHHHHHhCCcccEEEEe
Confidence 44666 46999999999 56666666532 455543 3221 3466789999999999999998764 333
Q ss_pred ccccccCCCccChHHHHHH-HHHHHhhhccCCCCCceEEEEEcchhhh--------hcCCCCCCChhhHHHHhhcc----
Q 026289 95 DPWEANQSGYQRTLTVLSR-VKNFLIEAGLISTESLKVMLVCGSDLLE--------SFAIPGFWMPEQVWTICRNF---- 161 (240)
Q Consensus 95 ~~~E~~~~~~~~t~~tl~~-l~~~~~~~~~~p~~~~~~~fl~G~D~l~--------~l~~~~~w~~~~~~~l~~~~---- 161 (240)
-+++..-.|+...+ +.. +++.|+ +. .||+|-|... ++- .|++ .++++..+
T Consensus 259 ~p~~m~yaGprea~--~hai~r~n~G---------~t-h~IvGrdhAg~g~~~~~~~~Y---~~~~--aq~i~~~~~~~l 321 (511)
T 1g8f_A 259 LPLAMRMSGDREAV--WHAIIRKNYG---------AS-HFIVGRDHAGPGKNSKGVDFY---GPYD--AQELVESYKHEL 321 (511)
T ss_dssp BCCBCCCCHHHHHH--HHHHHHHHTT---------CS-EEECCTTTTCCCBCTTSCBSS---CTTH--HHHHHHHTHHHH
T ss_pred cchhhhccCcHHHH--HHHHHHHhCC---------Cc-eEEeCCCCCCCCCCCcccccC---Ccch--HHHHHHhCcccc
Confidence 45555556665443 333 445552 33 8999999876 332 2444 47887764
Q ss_pred --cEEEEeCCCCChhhhhhchHHhhhcCCCEEEEcCCC-----CCCCCHHHHHHHHHcCCCC-CCCCcHHHHHHHHH
Q 026289 162 --GVICIRREGQDVEKIISDNEILDKNKGNIKLVDELV-----PNQISSTRIRDCICRGLSI-KYLTEDKVIDYIRE 230 (240)
Q Consensus 162 --~~vv~~R~~~~~~~~~~~~~~l~~~~~~i~~l~~~~-----~~~iSST~IR~~l~~g~~i-~~lvp~~V~~yI~~ 230 (240)
..+.+....+... .+.+..++..+ ...||+|+||++++.|..+ ..+++++|.+.+++
T Consensus 322 ~i~pv~fd~~~y~~~------------~g~~i~~d~~p~~~~~~~~iSgt~IR~~Lr~G~~~P~~f~rpeV~~vLr~ 386 (511)
T 1g8f_A 322 DIEVVPFRMVTYLPD------------EDRYAPIDQIDTTKTRTLNISGTELRRRLRVGGEIPEWFSYPEVVKILRE 386 (511)
T ss_dssp CSEEECCCCEEEEGG------------GTEEEEGGGCSSSCCCCBCCCHHHHHHHHHHTCCCCTTTSCHHHHHHHHH
T ss_pred CceEEeecceeEecc------------cCeEEEcccCCCCcccccccCHHHHHHHHhCCCCCCccccChhhHHHHHH
Confidence 4444433222110 13444444222 3689999999999999987 68999999999987
No 33
>3gmi_A UPF0348 protein MJ0951; protein with unknown function, structural genomics, PSI, MCS protein structure initiative; 1.91A {Methanocaldococcus jannaschii}
Probab=99.05 E-value=2.3e-09 Score=94.75 Aligned_cols=182 Identities=16% Similarity=0.127 Sum_probs=91.7
Q ss_pred EEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccc--cCCCCCHHHHHHHHHHHHhcCCceeeccccc
Q 026289 22 VVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYK--KRGLISAEHRINLCNLACKSSDFIMVDPWEA 99 (240)
Q Consensus 22 ~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~--k~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~ 99 (240)
.+++.-|.|||+|+||..+++.|.+ .+.+.+| +++.-.+.. ...+++..+|.+|+... +.+-+.+-++-.
T Consensus 53 ~~v~~lG~FDg~H~GHq~lI~~a~~---~~~~~~V---ms~~~~~vqrg~~~l~~~~~R~~~~~~~--GvD~vielpF~~ 124 (357)
T 3gmi_A 53 KIVCDFTEYNPLHKGHKYALEKGKE---HGIFISV---LPGPLERSGRGIPYFLNRYIRAEMAIRA--GADIVVEGPPMG 124 (357)
T ss_dssp CEEEEECCCTTCCHHHHHHHHHHHT---SSEEEEE---ECCTTSBCTTSSBCSSCHHHHHHHHHHH--TCSEEEECCCGG
T ss_pred CEEEEEEecCccCHHHHHHHHHHHH---cCCeEEE---EcCchHHhcCCCCcCCCHHHHHHHHHHC--CCCEEEEcCchh
Confidence 3455569999999999999999988 2323322 332110011 12578999999999875 333333333322
Q ss_pred cCCCccChHHH-HHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhh-cccEEEEeCC--CCChhh
Q 026289 100 NQSGYQRTLTV-LSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICR-NFGVICIRRE--GQDVEK 175 (240)
Q Consensus 100 ~~~~~~~t~~t-l~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~-~~~~vv~~R~--~~~~~~ 175 (240)
......+ ++. +..+. ..+ . -++++|+..-.+|. . +.+.++ .+++..-+.. |.+..+
T Consensus 125 ~~s~~~F-v~~~v~ll~-~l~-----~-----~~iv~G~~~~~~~~------~--~~~~i~~~~~~~~kp~~~~g~ey~~ 184 (357)
T 3gmi_A 125 IMGSGQY-MRCLIKMFY-SLG-----A-----EIIPRGYIPEKTME------K--VIDCINKGYHIQVKPYKIICIETGE 184 (357)
T ss_dssp GSCHHHH-HHHHHHHHH-HHT-----C-----CEEEEEECCCHHHH------H--HHHHHHTTCCEEEETTEEEETTTCC
T ss_pred hCCHHHH-HHHHHHHHH-HcC-----C-----CEEEECCCCchhHH------H--HHHHHhcccccccccchhccCcHHH
Confidence 1111112 221 12222 332 1 26788882111111 0 111111 1222211100 000000
Q ss_pred -----hhhchHH-------hhhc-----CCCEEEEcCCCCCCCCHHHHHHHHHcCC--CCCCCCcHHHHHHHHHC
Q 026289 176 -----IISDNEI-------LDKN-----KGNIKLVDELVPNQISSTRIRDCICRGL--SIKYLTEDKVIDYIRES 231 (240)
Q Consensus 176 -----~~~~~~~-------l~~~-----~~~i~~l~~~~~~~iSST~IR~~l~~g~--~i~~lvp~~V~~yI~~~ 231 (240)
......+ +.+. +..+.++.-.....+|+|.||+++.+|. .|+.+||+++.+|+++.
T Consensus 185 ~~~~~l~~pn~il~~y~kai~~~~~~~~~~~i~~~~i~R~~~~SAS~IR~~i~~g~~~~~~~lVP~~t~~~l~~~ 259 (357)
T 3gmi_A 185 ILGEKLNIDNYVIASMSQMIYKLNREGLKFNPKFVFVKRLEGISGTKIREAIFSGKFEDIKNMLPKTTLSILKEL 259 (357)
T ss_dssp EEESCCCGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEECSCCCCHHHHHHHHHTTCGGGTGGGSCHHHHHHHHHH
T ss_pred HHHHhccCCChHHHHHHHHHHHhCcCcCCCCCeEEEecCCCcccHHHHHHHHHcCChhHHHhcCChHHHHHHHHH
Confidence 0001111 2221 1344433211223799999999999995 79999999999999863
No 34
>2x0k_A Riboflavin biosynthesis protein RIBF; riboflavin kinase, nucleotide-binding, transferase, ATP-BIND multifunctional enzyme; 1.95A {Corynebacterium ammoniagenes}
Probab=99.03 E-value=4.6e-10 Score=98.83 Aligned_cols=74 Identities=16% Similarity=0.188 Sum_probs=48.1
Q ss_pred EEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCcc---cc--CCCCCHHHHHHHHHHHHhcCCceeeccc
Q 026289 23 VLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAY---KK--RGLISAEHRINLCNLACKSSDFIMVDPW 97 (240)
Q Consensus 23 i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~---~k--~~~~~~~~R~~Ml~~a~~~~~~i~v~~~ 97 (240)
.++..|+||++|.||+.+++.|.+.....++..+...|-|+.... .+ ..+.+.++|+++++.+ +.+.+.+.++
T Consensus 17 ~vvtiG~FDGvH~GHq~Li~~a~~~a~~~~~~~vvvtFdphP~~v~~~~~~~~~L~~~~eR~~ll~~~--gVD~v~v~~F 94 (338)
T 2x0k_A 17 SAVTIGVFDGVHRGHQKLINATVEKAREVGAKAIMVTFDPHPVSVFLPRRAPLGITTLAERFALAESF--GIDGVLVIDF 94 (338)
T ss_dssp EEEEESCCTTCCHHHHHHHHHHHHHHHHHTCEEEEEEESSCHHHHHSTTCSCCBSSCHHHHHHHHHHT--TCSEEEEECT
T ss_pred eEEEEEeCCcccHHHHHHHHHHHHHHHHcCCcEEEEEecCCHHHHcCCccCCCCCCCHHHHHHHHHhc--CCCEEEEccc
Confidence 567789999999999999999998754333322212344432111 11 3478999999999873 4555555555
Q ss_pred c
Q 026289 98 E 98 (240)
Q Consensus 98 E 98 (240)
.
T Consensus 95 ~ 95 (338)
T 2x0k_A 95 T 95 (338)
T ss_dssp T
T ss_pred c
Confidence 3
No 35
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=98.96 E-value=2.2e-09 Score=94.37 Aligned_cols=67 Identities=18% Similarity=0.248 Sum_probs=47.7
Q ss_pred CceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCc---ccc-CCCCCHHHHHHHHHHHHhcCCcee
Q 026289 19 KTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDA---YKK-RGLISAEHRINLCNLACKSSDFIM 93 (240)
Q Consensus 19 ~~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~---~~k-~~~~~~~~R~~Ml~~a~~~~~~i~ 93 (240)
++++++++.|+|||+|.||+.++++|.+.. +.+. |+ +.. ++ ..| +..++.++|++|++. +...+.+.
T Consensus 5 ~~~~~v~~~G~FD~lH~GH~~lL~~A~~l~--d~Li-Vg--V~~--d~~v~~~K~~pi~s~eER~~~l~~-l~~VD~Vv 75 (341)
T 3elb_A 5 RRAVRVWCDGCYDMVHYGHSNQLRQARAMG--DYLI-VG--VHT--DEEIAKHKGPPVFTQEERYKMVQA-IKWVDEVV 75 (341)
T ss_dssp CCCCEEEEEECCCSCCHHHHHHHHHHHHTS--SEEE-EE--ECC--HHHHHHHSSCCSSCHHHHHHHHHH-BTTCCEEE
T ss_pred CCceEEEEEeeCCCCCHHHHHHHHHHHHhC--CcCE-EE--eec--CHHHhccCCCCCCCHHHHHHHHHH-cCCCCEEE
Confidence 456789999999999999999999998865 4543 32 222 21 123 367899999999996 44444443
No 36
>3elb_A Ethanolamine-phosphate cytidylyltransferase; kennedy pathway, CMP, CTP, phosphoethanolamine, cytidylyltra SGC, structural genomics consortium; HET: C5P; 2.00A {Homo sapiens}
Probab=98.94 E-value=8e-10 Score=97.17 Aligned_cols=140 Identities=17% Similarity=0.194 Sum_probs=83.6
Q ss_pred cCCceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCe-EEEeeeecCCC-Ccccc---CCCCCHHHHHHHHHHHHhcCCc
Q 026289 17 QGKTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGY-CVIGGYMSPVN-DAYKK---RGLISAEHRINLCNLACKSSDF 91 (240)
Q Consensus 17 ~~~~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~-~vv~~~~~p~~-~~~~k---~~~~~~~~R~~Ml~~a~~~~~~ 91 (240)
+.+..+++++.|||||+|.||+.++++|.+.. |++ .+|+ +.... .+..| +..++.++|++|++ +++..++
T Consensus 194 ~~~~~~iv~~~GsFD~~h~GHl~~L~rA~~l~--D~~~LiVg--V~~d~~v~~~Kg~~~pi~~~~ER~~~v~-~~~~vd~ 268 (341)
T 3elb_A 194 PQPGETVIYVAGAFDLFHIGHVDFLEKVHRLA--ERPYIIAG--LHFDQEVNHYKGKNYPIMNLHERTLSVL-ACRYVSE 268 (341)
T ss_dssp CCTTCEEEEEEECCTTCCHHHHHHHHHHHTTS--SSEEEEEE--EECHHHHHHHHCTTCCSSCHHHHHHHHH-TBTTCCE
T ss_pred CCCCCEEEEEecccCCCCHHHHHHHHHHHHhC--CCCEEEEE--EccCHhhHhhcCCCCCCCCHHHHHHHHH-HcCCCCC
Confidence 34556899999999999999999999998854 522 2333 22110 01223 36899999999999 4676666
Q ss_pred eeeccccccCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhhcccEEEEeCCCC
Q 026289 92 IMVDPWEANQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICRNFGVICIRREGQ 171 (240)
Q Consensus 92 i~v~~~E~~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~~~~~vv~~R~~~ 171 (240)
+.+... ...+.+.++.++ |+ +++.|.|....-. .|.
T Consensus 269 V~v~~~------~~l~~~~~~~~~---------~~-----~iv~G~d~~~~~~------------------------~g~ 304 (341)
T 3elb_A 269 VVIGAP------YAVTAELLSHFK---------VD-----LVCHGKTEIIPDR------------------------DGS 304 (341)
T ss_dssp EEEEEC------SSCCHHHHHHTT---------CS-----EEEECSSCCCCCT------------------------TSC
T ss_pred EEECCC------CcchHHHHHhcC---------Cc-----EEEECCCCccccC------------------------Ccc
Confidence 666321 113455554432 43 7888976432111 111
Q ss_pred ChhhhhhchHHhhhcCCCEEEEcCCCCCCCCHHHHHHHHHcCC
Q 026289 172 DVEKIISDNEILDKNKGNIKLVDELVPNQISSTRIRDCICRGL 214 (240)
Q Consensus 172 ~~~~~~~~~~~l~~~~~~i~~l~~~~~~~iSST~IR~~l~~g~ 214 (240)
+... .. +..+.+..++ ....+|.|.|-+++.+.+
T Consensus 305 d~y~------~~-k~~G~~~~i~--~~~~~STt~ii~RI~~nr 338 (341)
T 3elb_A 305 DPYQ------EP-KRRGIFRQID--SGSNLTTDLIVQRIITNR 338 (341)
T ss_dssp CTTH------HH-HHHTCEEECC--CSCCCCHHHHHHHHHC--
T ss_pred chHH------HH-HhCCEEEEcC--CCCCCCHHHHHHHHHHHH
Confidence 1100 01 1124555554 357999999999987643
No 37
>3op1_A Macrolide-efflux protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PEG; 2.49A {Streptococcus pneumoniae}
Probab=98.94 E-value=2.5e-08 Score=86.48 Aligned_cols=73 Identities=10% Similarity=0.060 Sum_probs=46.1
Q ss_pred EEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCcc-------ccCCCCCHHHHHHHHHHHHhcCCceeec
Q 026289 23 VLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAY-------KKRGLISAEHRINLCNLACKSSDFIMVD 95 (240)
Q Consensus 23 i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~-------~k~~~~~~~~R~~Ml~~a~~~~~~i~v~ 95 (240)
.++.-|+||-+|.||..+++.|.+.....++..+...|-|..... ....+.+.++|+++++.+ +.+.+.+-
T Consensus 22 ~vvtiG~FDGvH~GHq~li~~a~~~a~~~~~~~vV~TFdphP~~v~~~~~~~~~~~Lt~~~eK~~ll~~l--GVD~v~~~ 99 (308)
T 3op1_A 22 SVVVLGYFDGIHKGHQELFRVANKAARKDLLPIVVMTFNESPKIALEPYHPDLFLHILNPAERERKLKRE--GVEELYLL 99 (308)
T ss_dssp EEEEESCCSSCCHHHHHHHHHHHHHSSTTCCCEEEEEESSCTHHHHSCCCGGGGCBSSCHHHHHHHHHHH--TCCEEEEE
T ss_pred eEEEEecCCcccHHHHHHHHHHHHHHHhcCCceEEEEecCCHHHHhCccccCCcccCCCHHHHHHHHHHc--CCCEEEEe
Confidence 345569999999999999999988654332221111356633211 112478999999999864 34455444
Q ss_pred cc
Q 026289 96 PW 97 (240)
Q Consensus 96 ~~ 97 (240)
++
T Consensus 100 ~F 101 (308)
T 3op1_A 100 DF 101 (308)
T ss_dssp CC
T ss_pred cC
Confidence 44
No 38
>1mrz_A Riboflavin kinase/FMN adenylyltransferase; rossmann fold, flavin binding domain, 6-stranded beta barrel nucleotide binding domain; HET: CIT; 1.90A {Thermotoga maritima} SCOP: b.43.5.1 c.26.1.3 PDB: 1s4m_A* 1t6x_A* 1t6y_A* 1t6z_A* 2i1l_A
Probab=98.92 E-value=1.2e-09 Score=94.28 Aligned_cols=58 Identities=16% Similarity=0.197 Sum_probs=39.4
Q ss_pred EEcCCCCchhHHHHHHHHHHHHHhccCCe--EEEeeeecCCCCcc---c-cCCCCCHHHHHHHHHHH
Q 026289 25 VATGSFNPPTFMHLRMFELARDTLNSEGY--CVIGGYMSPVNDAY---K-KRGLISAEHRINLCNLA 85 (240)
Q Consensus 25 ifgGSFnP~H~GHl~l~~~a~~~~~~~~~--~vv~~~~~p~~~~~---~-k~~~~~~~~R~~Ml~~a 85 (240)
+..|+||++|.||+.+++.|.+.....++ .++ .|-|+. .. . +..+.+.++|++|++.+
T Consensus 3 vtiG~FDgvH~GH~~ll~~a~~~a~~~~~~~vVv--tFdphP-~~l~~~~~~~l~~~~eR~~ll~~l 66 (293)
T 1mrz_A 3 VSIGVFDGVHIGHQKVLRTMKEIAFFRKDDSLIY--TISYPP-EYFLPDFPGLLMTVESRVEMLSRY 66 (293)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHTCCCEEE--EESSCG-GGGSTTCCCBSSCHHHHHHHHTTT
T ss_pred EEEeeCccccHHHHHHHHHHHHHHHHcCCeEEEE--EecCCH-HHhCCCCCCCCCCHHHHHHHHHhC
Confidence 45699999999999999999976532221 122 244432 11 1 12478999999999864
No 39
>2gks_A Bifunctional SAT/APS kinase; transferase, sulfurylase; HET: ADP; 2.31A {Aquifex aeolicus}
Probab=98.14 E-value=2.8e-05 Score=72.53 Aligned_cols=176 Identities=16% Similarity=0.207 Sum_probs=96.4
Q ss_pred ceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcC-C--ceeecc
Q 026289 20 TYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSS-D--FIMVDP 96 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~-~--~i~v~~ 96 (240)
+.++++ =++||+|+||..|++.|..... +.+.+ .|.-- ..|...++.+.|++.++.+++.. | .+.+..
T Consensus 164 ~~v~af--qtrnP~Hr~H~~l~~~a~~~~~-~~llv-----~p~~g-~~k~~di~~~~R~~~~~~~~~~~~p~~~v~~~~ 234 (546)
T 2gks_A 164 DKIVAF--QTRNPMHRVHEELTKRAMEKVG-GGLLL-----HPVVG-LTKPGDVDVYTRMRIYKVLYEKYYDKKKTILAF 234 (546)
T ss_dssp SCEEEE--CCSSCCCHHHHHHHHHHHHHHT-SEEEE-----CCBCS-BCCTTSCCHHHHHHHHHHHHHHHSCTTTEEECB
T ss_pred CcEEEE--ecCCCCcHHHHHHHHHHHHhcC-CcEEE-----EeCcC-CCCCCCCCHHHHHHHHHHHHHhcCCCCcEEEee
Confidence 456774 7799999999999999987532 45543 33222 23557899999999999998874 4 344444
Q ss_pred ccc--cCCCccChHHHHHH-HHHHHhhhccCCCCCceEEEEEcchhhhhcC-----CCCCCChhhHHHHhhc------cc
Q 026289 97 WEA--NQSGYQRTLTVLSR-VKNFLIEAGLISTESLKVMLVCGSDLLESFA-----IPGFWMPEQVWTICRN------FG 162 (240)
Q Consensus 97 ~E~--~~~~~~~t~~tl~~-l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~-----~~~~w~~~~~~~l~~~------~~ 162 (240)
+.. .-.|+. -..+.. +++.|+ +. .||+|-|...--. . .|..++.++++.. ..
T Consensus 235 ~p~~m~~agpr--ea~~ha~ir~n~G---------~t-h~ivgrdhag~g~~~~~~~--~Y~~~~a~~~~~~~~~~lgi~ 300 (546)
T 2gks_A 235 LPLAMRMAGPR--EALWHGIIRRNYG---------AT-HFIVGRDHASPGKDSKGKP--FYDPYEAQELFKKYEDEIGIK 300 (546)
T ss_dssp BCCBCCCCTHH--HHHHHHHHHHHTT---------CS-EEEECTTTTCCCBCTTSCB--SSCTTHHHHHHHHHHHHHTCE
T ss_pred cCchhhccCch--HHHHHHHHHHhCC---------CC-eEEECCCCCCCCCCCCCcc--cCCcchHHHHHHhcccccCce
Confidence 433 234543 222222 344552 44 6788988765431 1 1323334566543 22
Q ss_pred EEEEeCCCCChhhhhhchHHhhhcCCCEEEEcC-----CCCCCCCHHHHHHH-HHcCCCC-CCCCcHHHHHHHHH
Q 026289 163 VICIRREGQDVEKIISDNEILDKNKGNIKLVDE-----LVPNQISSTRIRDC-ICRGLSI-KYLTEDKVIDYIRE 230 (240)
Q Consensus 163 ~vv~~R~~~~~~~~~~~~~~l~~~~~~i~~l~~-----~~~~~iSST~IR~~-l~~g~~i-~~lvp~~V~~yI~~ 230 (240)
.+.+.--.+.. ..+.+..++. .....||+|+||+. ++.|..+ ..+..++|.+-+++
T Consensus 301 ~v~fd~~~y~~------------~~g~~i~id~~~~~~~~~~~iSgt~iR~~~L~~g~~~p~~~~r~eV~~~lr~ 363 (546)
T 2gks_A 301 MVPFEELVYVP------------ELDQYVEINEAKKRNLKYINISGTEIRENFLKQGRKLPEWFTRPEVAEILAE 363 (546)
T ss_dssp EEECCCCEEET------------TTTEEECSCC---------------CTHHHHTTTCCCCTTTSCHHHHHHHHH
T ss_pred EEeccceEEEc------------CCCeEEeeeccCCCCceeeecchhhhhhhhhcCCCCCCccccchhHHHHHHH
Confidence 33222111100 0123333331 12357999999999 9999876 44566888877766
No 40
>1m8p_A Sulfate adenylyltransferase; rossmann fold, phosphosulfate binding, T-state; HET: PPS; 2.60A {Penicillium chrysogenum} SCOP: b.122.1.3 c.26.1.5 c.37.1.15 PDB: 1i2d_A*
Probab=97.87 E-value=0.00022 Score=66.79 Aligned_cols=180 Identities=17% Similarity=0.151 Sum_probs=101.7
Q ss_pred ceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCc--eeeccc
Q 026289 20 TYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDF--IMVDPW 97 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~--i~v~~~ 97 (240)
+.+++ .=++||+|+||..+++.|....+ +.+.+ .|..- +.|...++.+.|++.++.+++..|. +.+..+
T Consensus 191 ~~v~a--fqtrnP~Hr~H~~l~~~a~~~~~-~~llv-----~pl~g-~~k~~di~~~~R~~~~~~~~~~~p~~~v~l~~~ 261 (573)
T 1m8p_A 191 SRVVA--FQTRNPMHRAHRELTVRAARSRQ-ANVLI-----HPVVG-LTKPGDIDHFTRVRAYQALLPRYPNGMAVLGLL 261 (573)
T ss_dssp CSEEE--ECCSSCCCHHHHHHHHHHHHHTT-CEEEE-----CCBCC-CCCTTCHHHHHHHHHHHHHGGGSSTTSEEECBB
T ss_pred CeEEE--EeeCCCcchhhHHHHHHHHHhcC-CcEEE-----EeCCC-CCCCCCCCHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 45666 47799999999999998887642 44443 34221 2356779999999999999987764 333333
Q ss_pred cc--cCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCC--CC-CCChhhHHHHhhc------ccEEEE
Q 026289 98 EA--NQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAI--PG-FWMPEQVWTICRN------FGVICI 166 (240)
Q Consensus 98 E~--~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~--~~-~w~~~~~~~l~~~------~~~vv~ 166 (240)
.. .-.|+.-.+.- ..+++.|+ +. .||+|-|...--.. -. .|..++.++++.. ...+.+
T Consensus 262 p~~m~~agprea~~h-a~ir~n~G---------~t-h~ivgrdhag~g~~~~~~~~Y~~~~a~~i~~~~~~~l~i~~v~f 330 (573)
T 1m8p_A 262 GLAMRMGGPREAIWH-AIIRKNHG---------AT-HFIVGRDHAGPGSNSKGEDFYGPYDAQHAVEKYKDELGIEVVEF 330 (573)
T ss_dssp CCCCCCCHHHHHHHH-HHHHHHHT---------CS-EEEECTTTTCCCCCTTCCCSSCTTHHHHHHHHHHHHHCCEEEEC
T ss_pred CchhhccCchHHHHH-HHHHHHCC---------CC-eEEECCCCCCCCCCCCCcccCCcchHHHHHHhhhhhcCceeEec
Confidence 32 22333211111 23445562 45 78889887644310 00 2333344666653 233333
Q ss_pred eCCCCChhhhhhchHHhhhcCCCEEEEcC----CCCCCCCHHHHHHHHHcCCCCC-CCCcHHHHHHHHHC
Q 026289 167 RREGQDVEKIISDNEILDKNKGNIKLVDE----LVPNQISSTRIRDCICRGLSIK-YLTEDKVIDYIRES 231 (240)
Q Consensus 167 ~R~~~~~~~~~~~~~~l~~~~~~i~~l~~----~~~~~iSST~IR~~l~~g~~i~-~lvp~~V~~yI~~~ 231 (240)
.--.+... .+.+..++. .....||+|+||+.+..|..+. ....+.|.+-.++.
T Consensus 331 d~~~y~~~------------~g~~i~id~~~~~~~~~~iSgt~ir~~l~~g~~~p~w~~~~eVsr~lRe~ 388 (573)
T 1m8p_A 331 QMVTYLPD------------TDEYRPVDQVPAGVKTLNISGTELRRRLRSGAHIPEWFSYPEVVKILRES 388 (573)
T ss_dssp CCCCBBTT------------TTBCCCSSSSCTTSCCBCCCHHHHHHHHHHTCCCCTTTSCHHHHHHHHTT
T ss_pred cceEEEcC------------CCcEEecccCCCCceeecCChHHHHHHHhccCCCCcccccccccHHHHHh
Confidence 22211110 122323331 1235799999999999997653 34446777666653
No 41
>1x6v_B Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthethase 1; transferase, ATP sulfurylase, APS kinase, PAPS; HET: ADP; 1.75A {Homo sapiens} SCOP: b.122.1.3 c.26.1.5 c.37.1.4 PDB: 1xjq_B* 1xnj_B* 2qjf_A* 2ofx_A* 2ofw_A*
Probab=97.61 E-value=0.0018 Score=61.22 Aligned_cols=179 Identities=14% Similarity=0.086 Sum_probs=104.1
Q ss_pred ceEEEEEcCCCCchhHHHHHHHHHHHHHhcc-----CCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhc--CC--
Q 026289 20 TYVVLVATGSFNPPTFMHLRMFELARDTLNS-----EGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKS--SD-- 90 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~-----~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~--~~-- 90 (240)
..++++ =+-||+|+||-.|++.|++.+.- +.+.+ .|.- .+.|.+.++.+-|++-.+..++. .|
T Consensus 413 ~~Vvaf--qtrNP~HraHe~l~~~a~~~~~d~g~~~~~lll-----~pl~-G~tk~~di~~~~r~~~~~~~~~~~y~p~~ 484 (630)
T 1x6v_B 413 DAVSAF--QLRNPVHNGHALLMQDTHKQLLERGYRRPVLLL-----HPLG-GWTKDDDVPLMWRMKQHAAVLEEGVLNPE 484 (630)
T ss_dssp SEEEEE--EESSCCCHHHHHHHHHHHHHHHHHTCSSEEEEE-----EEBC-SCCCTTSCCHHHHHHHHHHHHHTTSSCGG
T ss_pred CeEEEE--ecCCCccHHHHHHHHHHHHHHHhhccCCCcEEE-----EeCc-CCCCCCCCCHHHHHHHHHHHHHcCCCCCc
Confidence 456674 58999999999999999875321 13433 2321 12466789999999999999984 34
Q ss_pred ceeecccccc--CCCccChHHHHHH-HHHHHhhhccCCCCCceEEEEEcchhhhhcCC--CC-CCChhhHHHHhhcc---
Q 026289 91 FIMVDPWEAN--QSGYQRTLTVLSR-VKNFLIEAGLISTESLKVMLVCGSDLLESFAI--PG-FWMPEQVWTICRNF--- 161 (240)
Q Consensus 91 ~i~v~~~E~~--~~~~~~t~~tl~~-l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~--~~-~w~~~~~~~l~~~~--- 161 (240)
.+.+..+... -.||.-. .+-. +++.|+ + -.||+|-|...--+. -. .|..++.+++++..
T Consensus 485 ~~~l~~~p~~mryaGPrEa--~~hai~rkN~G---------c-th~IVGrdhAG~g~~~~~~~~Y~~~~aq~i~~~~~~~ 552 (630)
T 1x6v_B 485 TTVVAIFPSPMMYAGPTEV--QWHCRARMVAG---------A-NFYIVGRDPAGMPHPETGKDLYEPSHGAKVLTMAPGL 552 (630)
T ss_dssp GEEECCBCCCCCCCHHHHH--HHHHHHHHHTT---------C-SEEEECSSTTCCBCTTTCSBSSCTTHHHHHHHHCTTC
T ss_pred ceEEeeccchhhhcCcHHH--HHHHHHHHhCC---------C-CeEEECCCCCCCCCCCCccccCCcchHHHHHhcCccc
Confidence 3555544432 2444311 1222 334452 2 368999998755410 00 23344557777631
Q ss_pred -c--EEEEeCCCCChhhhhhchHHhhhcCCCEEEEcCC---CCCCCCHHHHHHHHHcCCCC-CCCCcHHHHHHHHH
Q 026289 162 -G--VICIRREGQDVEKIISDNEILDKNKGNIKLVDEL---VPNQISSTRIRDCICRGLSI-KYLTEDKVIDYIRE 230 (240)
Q Consensus 162 -~--~vv~~R~~~~~~~~~~~~~~l~~~~~~i~~l~~~---~~~~iSST~IR~~l~~g~~i-~~lvp~~V~~yI~~ 230 (240)
+ ++.+.---+. .+ ...+...++. ....||+|.+|++++.|..+ ..+.-|+|++.|.+
T Consensus 553 l~i~~~~~~~~~Y~-----------~~-~~~~~~~~p~~~~~~~~isgt~~R~~l~~G~~pP~~f~rpev~~~l~~ 616 (630)
T 1x6v_B 553 ITLEIVPFRVAAYN-----------KK-KKRMDYYDSEHHEDFEFISGTRMRKLAREGQKPPEGFMAPKAWTVLTE 616 (630)
T ss_dssp TTCEEEECCCEEEE-----------TT-TTEEEECCSTTGGGEECCCHHHHHHHHHTTCCCCTTSSCHHHHHHHHH
T ss_pred CCceEEEcceeEEE-----------cc-cCceeccCCCCCceeeecCHHHHHHHHHCCCCCCcccCcHHHHHHHHH
Confidence 1 1111110000 00 1122222211 13579999999999999864 56889999988875
No 42
>3cr8_A Sulfate adenylyltranferase, adenylylsulfate kinase; APS kinase, transferase, sulfate metabolism, nucleotide 2 kinase; 2.95A {Thiobacillus denitrificans}
Probab=97.28 E-value=0.0022 Score=59.71 Aligned_cols=180 Identities=10% Similarity=-0.014 Sum_probs=93.2
Q ss_pred ceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCc--ee--ec
Q 026289 20 TYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDF--IM--VD 95 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~--i~--v~ 95 (240)
+.++++ =+-||+|+||..+++.|....+ +.+. +.|.- .+.|.+.++.+-|++-.+.+++..|. +. +-
T Consensus 164 ~~v~af--qtrnp~Hrah~~~~~~~~~~~~-~~ll-----l~pl~-g~~k~~d~~~~~r~~~~~~~~~~~p~~~~~l~~~ 234 (552)
T 3cr8_A 164 RRIIAW--QARQPMHRAQYEFCLKSAIENE-ANLL-----LHPQV-GGDITEAPAYFGLVRSFLAIRDRFPAATTQLSLL 234 (552)
T ss_dssp CSEEEE--CCSSCCCHHHHHHHHHHHHHTT-CEEE-----ECCBC-CCCTTTCTTHHHHHHHHHHHGGGSCGGGEEECBB
T ss_pred CceEEE--ecCCCCchHHHHHHHHHHHhcC-CeEE-----EEecc-CCCCCCCCCHHHHHHHHHHHHHhCCCccEEEeec
Confidence 446666 8899999999999888885442 4443 34422 12466789999999999999998764 33 33
Q ss_pred cccccCCCccChHHHHHH-HHHHHhhhccCCCCCceEEEEEcchhhhhcCC--CCCCCh-hhHHHHhhcc----cEEEEe
Q 026289 96 PWEANQSGYQRTLTVLSR-VKNFLIEAGLISTESLKVMLVCGSDLLESFAI--PGFWMP-EQVWTICRNF----GVICIR 167 (240)
Q Consensus 96 ~~E~~~~~~~~t~~tl~~-l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~--~~~w~~-~~~~~l~~~~----~~vv~~ 167 (240)
+++..-.|+.-. .+.. +++.|+ + -.||+|-|...--+. -..||. ++.+++++.+ ++-.+.
T Consensus 235 p~~m~~agprea--~~ha~~r~n~G---------~-th~ivGrdhag~g~~~~~~~~Y~~~~a~~i~~~~~~~l~i~pv~ 302 (552)
T 3cr8_A 235 PAPPPEASGRAL--LLRAIVARNFG---------C-SLLIAGGEHQPDGGDCRRGEDLTQNRVDPSVAERAEKIGVRLIA 302 (552)
T ss_dssp CSCCCCSCSHHH--HHHHHHHHHHT---------C-SEEEC----------------------CCSSHHHHHHHTCEEEC
T ss_pred chhhcccCcHHH--HHHHHHHHhCC---------C-CeeeeCCCCCCCCCCCCccccCCcchHHHHHHhhhhhcCCeeee
Confidence 344444555321 2222 445563 2 268899997643210 001332 2233444332 111111
Q ss_pred CCCCChhhhhhchHHhhhcCCCEEEEcCC----CCCCCCHHHHHHHHHcCCCC-CCCCcHHHHHHHHH
Q 026289 168 REGQDVEKIISDNEILDKNKGNIKLVDEL----VPNQISSTRIRDCICRGLSI-KYLTEDKVIDYIRE 230 (240)
Q Consensus 168 R~~~~~~~~~~~~~~l~~~~~~i~~l~~~----~~~~iSST~IR~~l~~g~~i-~~lvp~~V~~yI~~ 230 (240)
=..+... .+ .+.+..++.. ....+|+|.||+.++.|..+ ..+.-+.|.+-+++
T Consensus 303 f~~~~y~---------~~-~g~~~~~d~~~~~~~~~~isgt~ir~~Lr~G~~~p~~f~~peV~~vLR~ 360 (552)
T 3cr8_A 303 YPRMVYV---------ED-RAEHLPEAEAPQGARLLTLSGEEFQRRMRAGLKIPEWYSFPEVLAELHR 360 (552)
T ss_dssp CCCEEEE---------GG-GTEEEEGGGSCTTCCEECCCHHHHHHHHTTTCCCCTTTSCHHHHHHHHH
T ss_pred ccceEEe---------cC-CCeEEecccCCCCcccccCCHHHHHHHHhcCCCCCccccccchhhhhhh
Confidence 1100000 00 1233333321 23579999999999999875 34454777776665
No 43
>2ejc_A Pantoate--beta-alanine ligase; X-RAY diffraction, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Thermotoga maritima}
Probab=96.77 E-value=0.0016 Score=55.38 Aligned_cols=61 Identities=15% Similarity=0.072 Sum_probs=40.0
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccc---cCCCCCHHHHHHHHHHH
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYK---KRGLISAEHRINLCNLA 85 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~---k~~~~~~~~R~~Ml~~a 85 (240)
++|++. |+||-+|.||+.+++.|++.. + ..||..+..|..-.+. .+.+.+.++|+++|+.+
T Consensus 22 ~~V~~v-gtfdgLH~GH~sLI~~A~~~a--d-~vVVSffvnP~qf~~~ed~~~yp~tle~d~~lL~~~ 85 (280)
T 2ejc_A 22 KTIGFV-PTMGYLHEGHLSLVRRARAEN--D-VVVVSIFVNPTQFGPNEDYERYPRDFERDRKLLEKE 85 (280)
T ss_dssp CCEEEE-EECSCCCHHHHHHHHHHHHHS--S-EEEEEECCCGGGCCTTSCGGGSCCCHHHHHHHHHTT
T ss_pred CEEEEE-cCCccccHHHHHHHHHHHHhC--C-EEEEEEeCChHHhcCCcccccCCCCHHHHHHHHHHC
Confidence 345554 899999999999999999865 3 4344322233221111 12477899999998753
No 44
>3ag6_A Pantothenate synthetase; ATP-dependent enzyme, ATP-binding, nucleotide-binding, pantothenate biosynthesis; HET: PAJ PG4; 1.85A {Staphylococcus aureus} PDB: 3ag5_A* 2x3f_A*
Probab=92.78 E-value=0.23 Score=42.12 Aligned_cols=58 Identities=12% Similarity=0.131 Sum_probs=36.5
Q ss_pred EEEE--EcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccc---cCCCCCHHHHHHHHHHH
Q 026289 22 VVLV--ATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYK---KRGLISAEHRINLCNLA 85 (240)
Q Consensus 22 ~i~i--fgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~---k~~~~~~~~R~~Ml~~a 85 (240)
+|++ ..|. +|.||+.+++.|++.. + ..|+.-+..|..-.+. .+.+.+.++++++++.+
T Consensus 24 ~I~fVpTmG~---lH~GH~~LI~~a~~~a--~-~vVvsffvnP~qf~~~ed~~~yprtle~d~~ll~~~ 86 (283)
T 3ag6_A 24 TIGFIPTMGA---LHDGHLTMVRESVSTN--D-ITIVSVFVNPLQFGPNEDFDAYPRQIDKDLELVSEV 86 (283)
T ss_dssp CEEEEEECSS---CCHHHHHHHHHHHTTS--S-EEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHH
T ss_pred cEEEEECCcc---ccHHHHHHHHHHHHhC--C-EEEEEEeCChhhcCCccccccCCCCHHHHHHHHHhC
Confidence 4555 4554 9999999999998864 3 3344322233221111 12477899999999864
No 45
>1v8f_A Pantoate-beta-alanine ligase; rossmann fold, dimer, structural genomics, riken STR genomics/proteomics initiative, RSGI; HET: P6G; 1.90A {Thermus thermophilus} SCOP: c.26.1.4 PDB: 1ufv_A
Probab=91.65 E-value=0.41 Score=40.44 Aligned_cols=54 Identities=22% Similarity=0.189 Sum_probs=34.3
Q ss_pred EcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccc---cCCCCCHHHHHHHHHHH
Q 026289 26 ATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYK---KRGLISAEHRINLCNLA 85 (240)
Q Consensus 26 fgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~---k~~~~~~~~R~~Ml~~a 85 (240)
..|. +|.||+.|++.|++.. + ..|+.-+..|..-.+. .+.+.+.++|+++++.+
T Consensus 24 TmG~---lH~GH~~Li~~A~~~a--~-~vVvsff~nP~qf~~~ed~~~yp~tle~d~~ll~~~ 80 (276)
T 1v8f_A 24 TMGY---LHRGHLALVERARREN--P-FVVVSVFVNPLQFGPGEDYHRYPRDLERDRALLQEA 80 (276)
T ss_dssp ECSS---CCHHHHHHHHHHHHHC--S-EEEEEECCCGGGCCTTSSTTTSCCCHHHHHHHHHHT
T ss_pred eCCC---ccHHHHHHHHHHHHhC--C-EEEEEEECCHHHhCCCcccCCCCcCHHHHHHHHHhC
Confidence 4555 9999999999999865 3 3344322222221111 12478999999999863
No 46
>3cov_A Pantothenate synthetase; pantothenate biosynthesis, enzym ligase, drug design, ATP-binding, magnesium, metal-binding; 1.50A {Mycobacterium tuberculosis} SCOP: c.26.1.4 PDB: 3cow_A* 3coy_A* 3coz_A* 3imc_A* 3ime_A* 3img_A* 3iob_A* 3ioc_A* 3iod_A* 3ioe_A* 3iub_A* 3iue_A* 3ivc_A* 3ivg_A* 3ivx_A* 2a84_A* 1n2b_A* 1n2e_A* 1n2g_A* 1n2h_A* ...
Probab=90.49 E-value=0.32 Score=41.62 Aligned_cols=50 Identities=10% Similarity=0.046 Sum_probs=32.2
Q ss_pred hhHHHHHHHHHHHH-HhccCCeEEEeeeecCCCCcccc---CCCCCHHHHHHHHHHH
Q 026289 33 PTFMHLRMFELARD-TLNSEGYCVIGGYMSPVNDAYKK---RGLISAEHRINLCNLA 85 (240)
Q Consensus 33 ~H~GHl~l~~~a~~-~~~~~~~~vv~~~~~p~~~~~~k---~~~~~~~~R~~Ml~~a 85 (240)
.|.||+.|++.|++ .. ...|+--+..|..-.+.. +.+.+.++++++|+.+
T Consensus 44 LH~GH~sLI~~A~~~~a---~~vVvSffvnP~qF~~~ed~~~yprtle~d~~lL~~~ 97 (301)
T 3cov_A 44 LHEGHLALVRAAKRVPG---SVVVVSIFVNPMQFGAGGDLDAYPRTPDDDLAQLRAE 97 (301)
T ss_dssp CCHHHHHHHHHHHTSTT---EEEEEEECCCGGGCCSSSHHHHSCCCHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHhcC---CEEEEEEcCChhhcCCccccccCCCCHHHHHHHHHhC
Confidence 99999999999987 54 233443223332211111 2478899999998864
No 47
>3inn_A Pantothenate synthetase; ssgcid, SBRI, UW, decode, NIH, niaid, pantoate beta alanine ligase, ATP-binding, cytoplasm, ligase; HET: ATP; 2.10A {Brucella melitensis}
Probab=89.87 E-value=0.76 Score=39.38 Aligned_cols=60 Identities=17% Similarity=0.090 Sum_probs=41.6
Q ss_pred ceEEEE--EcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccc---cCCCCCHHHHHHHHHHH
Q 026289 20 TYVVLV--ATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYK---KRGLISAEHRINLCNLA 85 (240)
Q Consensus 20 ~~~i~i--fgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~---k~~~~~~~~R~~Ml~~a 85 (240)
.++||+ ..|. .|.||+.|++.|++.. | +.||-.++.|..-.+. .+.+-+.+..+++|+.+
T Consensus 42 g~~IgfVPTMG~---LH~GHlsLi~~A~~~~--d-~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~ 106 (314)
T 3inn_A 42 GKKIGFVPTMGY---LHKGHLELVRRARVEN--D-VTLVSIFVNPLQFGANEDLGRYPRDLERDAGLLHDA 106 (314)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHHHC--S-EEEEEECCCGGGSCTTSSTTTCCCCHHHHHHHHHHT
T ss_pred CCeEEEEcCCCc---cCHHHHHHHHHHHHhC--C-EEEEEECCChhhcCCCccccccCCCHHHHHHHHHhC
Confidence 346777 5564 9999999999999874 3 4455555566433222 23577899999998865
No 48
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=87.32 E-value=0.9 Score=38.48 Aligned_cols=60 Identities=8% Similarity=0.072 Sum_probs=41.3
Q ss_pred ceEEEE--EcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCcccc---CCCCCHHHHHHHHHHH
Q 026289 20 TYVVLV--ATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKK---RGLISAEHRINLCNLA 85 (240)
Q Consensus 20 ~~~i~i--fgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k---~~~~~~~~R~~Ml~~a 85 (240)
.++||+ ..|. .|.||+.+++.|++.. | +.||..|+.|..-++.. +.+-+.+.=+++|+.+
T Consensus 24 g~~IgfVPTMG~---LH~GHlsLv~~Ar~~~--d-~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~~l~~~ 88 (287)
T 3q12_A 24 GKRIALVPTMGN---LHEGHMTLVDEAKTRA--D-VVVVTIFVNPLQFERPDDLAHYPRTLQEDCEKLTRH 88 (287)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHHTTS--S-EEEEEECCCGGGCSSHHHHHHSCCCHHHHHHHHHHH
T ss_pred CCeEEEEcCCCc---ccHHHHHHHHHHHHhC--C-EEEEEeccCcccCCCcchhhcCCCCHHHHHHHHHHC
Confidence 446887 6675 9999999999998864 3 44666566664433221 3467777778888765
No 49
>3uk2_A Pantothenate synthetase; AMP, structural genomics, seattle S genomics center for infectious disease, ssgcid, ligase; HET: AMP; 2.25A {Burkholderia thailandensis} SCOP: c.26.1.0
Probab=82.22 E-value=1.3 Score=37.34 Aligned_cols=60 Identities=12% Similarity=0.051 Sum_probs=39.5
Q ss_pred EEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccc---cCCCCCHHHHHHHHHHH
Q 026289 22 VVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYK---KRGLISAEHRINLCNLA 85 (240)
Q Consensus 22 ~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~---k~~~~~~~~R~~Ml~~a 85 (240)
.||+ -.+..=.|.||+.|++.|++.. +. .|+-.+..|..-.+. .+.+.+.++++++|+.+
T Consensus 23 ~ig~-VPTMG~LH~GH~sLi~~A~~~~--d~-vVvSifvnP~qf~~~ed~~~yprt~e~d~~ll~~~ 85 (283)
T 3uk2_A 23 RTAF-VPTMGNLHEGHLSLMRLARQHG--DP-VVASIFVNRLQFGPNEDFDKYPRTLQEDIEKLQKE 85 (283)
T ss_dssp SCEE-EEECSSCCHHHHHHHHHHHTTC--SS-EEEEECCCGGGSCTTSCTTTSCCCHHHHHHHHHTT
T ss_pred eEEE-ECCCCcccHHHHHHHHHHHHhC--CE-EEEEEcCCHHHcCCcccccccCCCHHHHHHHHHHc
Confidence 4554 4677789999999999999865 33 344333444322111 23578999999998864
No 50
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=78.58 E-value=2.2 Score=35.59 Aligned_cols=62 Identities=6% Similarity=0.069 Sum_probs=39.4
Q ss_pred ceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCcccc---CCCCCHHHHHHHHHHH
Q 026289 20 TYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKK---RGLISAEHRINLCNLA 85 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k---~~~~~~~~R~~Ml~~a 85 (240)
.+.||+.. |--=.|.||+.|++.|++.. | +.||-.|+.|..-++.. +.+-+.+.=+++|+.+
T Consensus 23 g~~ig~VP-TMGaLH~GHlsLv~~Ar~~~--d-~vVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~ 87 (264)
T 3n8h_A 23 QQKIGFVP-TMGALHNGHISLIKKAKSEN--D-VVIVSIFVNPTQFNNPNDYQTYPNQLQQDIQILASL 87 (264)
T ss_dssp TSCEEEEE-ECSSCCHHHHHHHHHHHHHC--S-EEEEEECCCGGGCSCHHHHHHSCCCHHHHHHHHHHT
T ss_pred CCcEEEEC-CCcchhHHHHHHHHHHHHhC--C-EEEEEEccCcccCCCcchhhcCCCCHHHHHHHHHHC
Confidence 34566542 33458999999999999875 3 44555556664333221 2466777777777754
No 51
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=75.89 E-value=3.2 Score=35.05 Aligned_cols=59 Identities=14% Similarity=0.166 Sum_probs=38.9
Q ss_pred ceEEEE--EcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccc---cCCCCCHHHHHHHHHHH
Q 026289 20 TYVVLV--ATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYK---KRGLISAEHRINLCNLA 85 (240)
Q Consensus 20 ~~~i~i--fgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~---k~~~~~~~~R~~Ml~~a 85 (240)
.+.||+ ..|. .|.||+.|++.|++ . | +.||-.|+.|..-++. .+.+-+.+.=+++|+.+
T Consensus 24 g~~Ig~VPTMGa---LH~GHlsLv~~Ar~-~--d-~VVVSIFVNP~QF~~~EDl~~YPRtle~D~~ll~~~ 87 (285)
T 3mxt_A 24 QLSIGYVPTMGF---LHDGHLSLVKHAKT-Q--D-KVIVSIFVNPMQFGPNEDFSSYPRDLERDIKMCQDN 87 (285)
T ss_dssp TCCEEEEEECSS---CCHHHHHHHHHHTT-S--S-EEEEEECCCGGGCCTTSCTTTSCCCHHHHHHHHHHT
T ss_pred CCeEEEEcCCCc---ccHHHHHHHHHHHh-C--C-EEEEEeccCccccCCchhhhcCCCCHHHHHHHHHHC
Confidence 345776 4454 89999999999988 4 4 4455556666443322 23467788888888764
No 52
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=50.21 E-value=33 Score=28.81 Aligned_cols=113 Identities=7% Similarity=-0.007 Sum_probs=54.6
Q ss_pred ceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEeeeecCCCCccccCCCCCHHHHHHHHHHHHhcCCceeeccccc
Q 026289 20 TYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAYKKRGLISAEHRINLCNLACKSSDFIMVDPWEA 99 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~~k~~~~~~~~R~~Ml~~a~~~~~~i~v~~~E~ 99 (240)
+..+.+.||.-|-. +.-.+.+...+..+..+-.++ |+|.+.. ..+.=.+..+.+++....-.|...++
T Consensus 26 ~g~l~iiGGgedk~--~~~~i~~~~v~lagg~~~~I~---~IptAs~-------~~~~~~~~~~~~f~~lG~~~v~~L~i 93 (291)
T 3en0_A 26 QPAILIIGGAEDKV--HGREILQTFWSRSGGNDAIIG---IIPSASR-------EPLLIGERYQTIFSDMGVKELKVLDI 93 (291)
T ss_dssp SCCEEEECSSCCSS--SCCHHHHHHHHHTTGGGCEEE---EECTTCS-------SHHHHHHHHHHHHHHHCCSEEEECCC
T ss_pred CceEEEEECCCCcc--ChHHHHHHHHHHcCCCCCeEE---EEeCCCC-------ChHHHHHHHHHHHHHcCCCeeEEEEe
Confidence 34566778888733 223455666666654322222 4554431 12222333445555433212333333
Q ss_pred cCCCccChHHHHHHHHHHHhhhccCCCCCceEEEEEcchhhhhcCCCCCCChhhHHHHhh
Q 026289 100 NQSGYQRTLTVLSRVKNFLIEAGLISTESLKVMLVCGSDLLESFAIPGFWMPEQVWTICR 159 (240)
Q Consensus 100 ~~~~~~~t~~tl~~l~~~~~~~~~~p~~~~~~~fl~G~D~l~~l~~~~~w~~~~~~~l~~ 159 (240)
........-+.++.+++ ++..|+-|-|++.-+.. |+...+.+.++
T Consensus 94 ~~r~~a~~~~~~~~l~~------------ad~I~v~GGnt~~l~~~---l~~t~l~~~L~ 138 (291)
T 3en0_A 94 RDRAQGDDSGYRLFVEQ------------CTGIFMTGGDQLRLCGL---LADTPLMDRIR 138 (291)
T ss_dssp CSGGGGGCHHHHHHHHH------------CSEEEECCSCHHHHHHH---HTTCHHHHHHH
T ss_pred cCccccCCHHHHHHHhc------------CCEEEECCCCHHHHHHH---HHhCCHHHHHH
Confidence 21111112233444432 57999999999988875 54433344443
No 53
>1yoe_A Hypothetical protein YBEK; pyrimidine nucleoside hydrolase, bacterial nucleosidase, RIB enzyme-product complex, hydrolase; HET: RIB; 1.78A {Escherichia coli} PDB: 3g5i_A*
Probab=39.45 E-value=10 Score=32.37 Aligned_cols=27 Identities=15% Similarity=0.283 Sum_probs=20.7
Q ss_pred Chhhhccccc-c---cCCceEEEEEcCCCCc
Q 026289 6 PLEKLSLESK-T---QGKTYVVLVATGSFNP 32 (240)
Q Consensus 6 p~~~~~~~~~-~---~~~~~~i~ifgGSFnP 32 (240)
|.|||+++++ . .++-+.|.+.||+|.+
T Consensus 137 PLTNlA~al~~~P~i~~~i~~iviMGGa~~~ 167 (322)
T 1yoe_A 137 PQTNVALLLNSHPELHSKIARIVIMGGAMGL 167 (322)
T ss_dssp CSHHHHHHHHHCGGGGGGEEEEEEECCCSSC
T ss_pred cHHHHHHHHHHChHHHhhCCEEEEeCCCCCC
Confidence 8899999887 2 2455688999999863
No 54
>1v31_A Hypothetical protein RAFL11-05-P19; SWI/SNF complex subunit, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=37.55 E-value=8.6 Score=26.65 Aligned_cols=22 Identities=9% Similarity=0.152 Sum_probs=17.2
Q ss_pred CCCCCcHHHHHHHHHCCCCCCC
Q 026289 216 IKYLTEDKVIDYIRESRLYLNS 237 (240)
Q Consensus 216 i~~lvp~~V~~yI~~~~LY~~~ 237 (240)
-+.-|-..+++||++|+|....
T Consensus 28 sr~evvk~lW~YIK~n~Lqdp~ 49 (93)
T 1v31_A 28 TRPRIIAAIWHYVKARKLQNPN 49 (93)
T ss_dssp CSHHHHHHHHHHHHHTTCBCSS
T ss_pred CHHHHHHHHHHHHHHccCcCcc
Confidence 3445788899999999998543
No 55
>2c40_A Inosine-uridine preferring nucleoside hydrolase F protein; spine; 2.2A {Bacillus anthracis}
Probab=37.45 E-value=11 Score=31.83 Aligned_cols=26 Identities=23% Similarity=0.341 Sum_probs=20.9
Q ss_pred Chhhhccccc-c---cCCceEEEEEcCCCC
Q 026289 6 PLEKLSLESK-T---QGKTYVVLVATGSFN 31 (240)
Q Consensus 6 p~~~~~~~~~-~---~~~~~~i~ifgGSFn 31 (240)
|.|||+++++ . .++-+.|.+.||+|+
T Consensus 127 PLTNlA~al~~~P~i~~~i~~iviMGGa~~ 156 (312)
T 2c40_A 127 PLTDLARALYEAPIIENKIKRLVWMGGTFR 156 (312)
T ss_dssp CSHHHHHHHHHCGGGGGGEEEEEEECCCCS
T ss_pred cHHHHHHHHHHChhHHhhcCEEEEeCCccc
Confidence 8899999887 2 245568999999997
No 56
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=37.28 E-value=48 Score=26.45 Aligned_cols=38 Identities=16% Similarity=-0.063 Sum_probs=22.8
Q ss_pred CceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEE
Q 026289 19 KTYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVI 56 (240)
Q Consensus 19 ~~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv 56 (240)
+.+.|+|||||=++..--....++..-+.+...++.+|
T Consensus 12 ~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vV 49 (215)
T 2a33_A 12 KFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLV 49 (215)
T ss_dssp SCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEE
Confidence 34579999888876654445555555555443444443
No 57
>1q8f_A Pyrimidine nucleoside hydrolase; open alpha-beta structure, NH-fold; 1.70A {Escherichia coli} SCOP: c.70.1.1 PDB: 3b9x_A* 3mkn_A* 3mkm_A*
Probab=35.67 E-value=13 Score=31.60 Aligned_cols=27 Identities=15% Similarity=0.432 Sum_probs=21.0
Q ss_pred Chhhhccccc-cc---CCceEEEEEcCCCCc
Q 026289 6 PLEKLSLESK-TQ---GKTYVVLVATGSFNP 32 (240)
Q Consensus 6 p~~~~~~~~~-~~---~~~~~i~ifgGSFnP 32 (240)
|.|||+++++ .| ++-+.|.+.||+|..
T Consensus 126 PLTNlA~al~~~P~i~~~i~~iviMGG~~~~ 156 (313)
T 1q8f_A 126 PLSNIAVAMRMQPAILPKIREIVLMGGAYGT 156 (313)
T ss_dssp CSHHHHHHHHHCGGGGGGEEEEEEECCCSSC
T ss_pred cHHHHHHHHHHCHHHHHhCCEEEEECCCCCC
Confidence 8899999887 22 445679999999965
No 58
>2mas_A Inosine-uridine nucleoside N-ribohydrolase; purine nucleoside hydrolase, IU-NH, purine nucleosidase; HET: PIR; 2.30A {Crithidia fasciculata} SCOP: c.70.1.1 PDB: 1mas_A* 1ezr_A
Probab=35.65 E-value=9.8 Score=32.32 Aligned_cols=27 Identities=11% Similarity=0.358 Sum_probs=20.5
Q ss_pred Chhhhcccccc-c---CCceEEEEEcCCCCc
Q 026289 6 PLEKLSLESKT-Q---GKTYVVLVATGSFNP 32 (240)
Q Consensus 6 p~~~~~~~~~~-~---~~~~~i~ifgGSFnP 32 (240)
|.|||+++++. + ++-+.|.+.||+|.+
T Consensus 127 PLTNlA~al~~~P~i~~~i~~iviMGG~~~~ 157 (314)
T 2mas_A 127 GLTNIAMAARLEPRIVDRVKEVVLMGGGYHE 157 (314)
T ss_dssp CSHHHHHHHHHCTHHHHHSCEEEEECCCSSC
T ss_pred cHHHHHHHHHHChhHHhhCCEEEEeCCcccC
Confidence 88999998873 2 345679999999943
No 59
>1xou_A ESPA; coiled coil, helix bundle, heterodimer, structural protein/chaperone complex; 2.80A {Escherichia coli} SCOP: a.231.1.1
Probab=35.31 E-value=7.9 Score=30.19 Aligned_cols=19 Identities=32% Similarity=0.473 Sum_probs=0.0
Q ss_pred CCCCCcHHHHHHHHH--CCCC
Q 026289 216 IKYLTEDKVIDYIRE--SRLY 234 (240)
Q Consensus 216 i~~lvp~~V~~yI~~--~~LY 234 (240)
.+.-||++|++||++ ||+-
T Consensus 99 ak~~LP~dVI~Ymrd~~NgIt 119 (192)
T 1xou_A 99 AKAQLPDEVISYINDPRNDIT 119 (192)
T ss_dssp ---------------------
T ss_pred ccccCCHHHHHHHHccCCCee
Confidence 356799999999999 8864
No 60
>3t8i_A Purine nucleosidase, (IUNH-2); purine nucleoside hydrolase, thermostable protein, open (ALP structure, rossmann fold, NH-fold; 1.80A {Sulfolobus solfataricus}
Probab=35.07 E-value=14 Score=31.41 Aligned_cols=27 Identities=19% Similarity=0.386 Sum_probs=20.3
Q ss_pred Chhhhccccc-c---cCCceEEEEEcCCCCc
Q 026289 6 PLEKLSLESK-T---QGKTYVVLVATGSFNP 32 (240)
Q Consensus 6 p~~~~~~~~~-~---~~~~~~i~ifgGSFnP 32 (240)
|.|||+++++ . .++-+.|.+.||+|.+
T Consensus 123 pLTNlA~al~~~P~i~~~i~~iviMGG~~~~ 153 (306)
T 3t8i_A 123 PLTNIALAYLKDPSVVKRVKKIWIMGGAFSK 153 (306)
T ss_dssp CSHHHHHHHHHCGGGGGTCCEEEEECCCSSC
T ss_pred ChHHHHHHHHHChhHHhhcCEEEEecCCCCC
Confidence 8889988886 2 2455678899999854
No 61
>3t8j_A Purine nucleosidase, (IUNH-1); nucleoside hydrolase, thermostable protein, open (alpha,beta structure, rossmann fold, NH-fold; 1.60A {Sulfolobus solfataricus}
Probab=34.89 E-value=10 Score=32.32 Aligned_cols=27 Identities=30% Similarity=0.272 Sum_probs=20.5
Q ss_pred Chhhhcccccc-c---CCceEEEEEcCCCCc
Q 026289 6 PLEKLSLESKT-Q---GKTYVVLVATGSFNP 32 (240)
Q Consensus 6 p~~~~~~~~~~-~---~~~~~i~ifgGSFnP 32 (240)
|.|||+++++. | ++-+.|.+.||+|+.
T Consensus 123 pLTNlA~al~~~P~i~~~i~~iviMGG~~~~ 153 (311)
T 3t8j_A 123 PLTNLALAYLLDNSIVKKIKKVWVMGGAVFG 153 (311)
T ss_dssp CSHHHHHHHHHCTTHHHHEEEEEEECCCTTS
T ss_pred ChHHHHHHHHHChHHHhhcCEEEEcCCcccC
Confidence 88999998873 2 344678999999854
No 62
>1v32_A AT5G08430, hypothetical protein RAFL09-47-K03; SWI/SNF complex subunit, structural genomics; NMR {Arabidopsis thaliana} SCOP: a.42.1.1
Probab=34.39 E-value=14 Score=25.98 Aligned_cols=20 Identities=30% Similarity=0.416 Sum_probs=16.0
Q ss_pred CCCcHHHHHHHHHCCCCCCC
Q 026289 218 YLTEDKVIDYIRESRLYLNS 237 (240)
Q Consensus 218 ~lvp~~V~~yI~~~~LY~~~ 237 (240)
.-|-..+++||++|+|....
T Consensus 38 ~eVvk~lW~YIK~nnLQdp~ 57 (101)
T 1v32_A 38 YDVSDTIAKYISKEGLLDPS 57 (101)
T ss_dssp HHHHHHHHHHHHHHTCBCSS
T ss_pred HHHHHHHHHHHHhhcCcCcc
Confidence 35778899999999998543
No 63
>4fo5_A Thioredoxin-like protein; AHPC/TSA family protein, structural genomics, joint center F structural genomics, JCSG; 2.02A {Parabacteroides distasonis}
Probab=33.41 E-value=94 Score=21.74 Aligned_cols=38 Identities=5% Similarity=0.096 Sum_probs=29.5
Q ss_pred ceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEe
Q 026289 20 TYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIG 57 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~ 57 (240)
+.+++.|.++.+|+-...+..+....+.+...++.+|.
T Consensus 33 k~vll~F~a~wC~~C~~~~~~l~~l~~~~~~~~~~vv~ 70 (143)
T 4fo5_A 33 RYTLLNFWAAYDAESRARNVQLANEVNKFGPDKIAMCS 70 (143)
T ss_dssp CEEEEEEECTTCHHHHHHHHHHHHHHTTSCTTTEEEEE
T ss_pred CEEEEEEEcCcCHHHHHHHHHHHHHHHHhCcCCEEEEE
Confidence 45788899999999888887777777776545676664
No 64
>3kfl_A Methionyl-tRNA synthetase; parasite, aminoacyl-tRNA synthetase, tRNA ligase metrs, methionine, translation, ATP-binding; HET: ME8; 2.00A {Leishmania major}
Probab=33.38 E-value=15 Score=33.77 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=15.6
Q ss_pred hhccccccc---CCceEEEEEcCCCC---chhHHHHH
Q 026289 9 KLSLESKTQ---GKTYVVLVATGSFN---PPTFMHLR 39 (240)
Q Consensus 9 ~~~~~~~~~---~~~~~i~ifgGSFn---P~H~GHl~ 39 (240)
.|+++++.+ +..+++.|.+.+.+ |+|.||+.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~i~~~~py~ng~lHiGH~r 47 (564)
T 3kfl_A 11 TLEAQTQGPGSMKKQKVFFATTPIYYVNASPHIGHVY 47 (564)
T ss_dssp -------------CCCCEEEEEEEEECSSCCCHHHHH
T ss_pred hhhhhhcCCccccCCCCEEEeCCCCCCCCCCCcchhH
Confidence 456666532 33356777777765 99999995
No 65
>3epw_A IAG-nucleoside hydrolase; rossmann fold, active site loops, aromatic stacking; HET: JMQ; 1.30A {Trypanosoma vivax} SCOP: c.70.1.1 PDB: 3epx_A* 1hoz_A 1hp0_A* 2ff1_A* 2ff2_A* 1kic_A* 1kie_A* 1r4f_A* 3b9g_A*
Probab=31.35 E-value=16 Score=31.40 Aligned_cols=26 Identities=15% Similarity=0.289 Sum_probs=19.2
Q ss_pred Chhhhccccc-c-c---CCceEEEEEcCCCC
Q 026289 6 PLEKLSLESK-T-Q---GKTYVVLVATGSFN 31 (240)
Q Consensus 6 p~~~~~~~~~-~-~---~~~~~i~ifgGSFn 31 (240)
|.|||+++++ . + ++-+.|.+.||+|+
T Consensus 150 pLTNlA~al~~~gP~~~~~i~~iviMGG~~~ 180 (338)
T 3epw_A 150 PLSNVAWCIDKYGEKFTSKVEECVIMGGAVD 180 (338)
T ss_dssp CTHHHHHHHHHHTHHHHTTEEEEEEECCCSS
T ss_pred CchHHHHHHHHcCHHHHHhCCEEEEecCCCC
Confidence 7888888876 3 2 45567888888885
No 66
>3gl3_A Putative thiol:disulfide interchange protein DSBE; oxidoreductase, PSI-II, structural genomics, protein structure initiative; 2.09A {Chlorobium tepidum tls}
Probab=31.08 E-value=83 Score=22.14 Aligned_cols=37 Identities=16% Similarity=0.219 Sum_probs=28.1
Q ss_pred ceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEE
Q 026289 20 TYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVI 56 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv 56 (240)
+..++.|.++.+|+-...+..+....+.+...++.++
T Consensus 29 k~vll~f~~~~C~~C~~~~~~l~~l~~~~~~~~~~~v 65 (152)
T 3gl3_A 29 SVVYLDFWASWCGPCRQSFPWMNQMQAKYKAKGFQVV 65 (152)
T ss_dssp SEEEEEEECTTCTHHHHHHHHHHHHHHHHGGGTEEEE
T ss_pred CEEEEEEECCcCHHHHHHHHHHHHHHHHhhcCCeEEE
Confidence 4678889999999988877777777777765556665
No 67
>4dlp_A Aminoacyl-tRNA synthetase, class I:aminoacyl-tRNA synthetase, class IA:methionyl-tRNA...; structural genomics; 2.65A {Brucella melitensis biovar abortus 230ORGANISM_TAXID}
Probab=28.77 E-value=36 Score=30.92 Aligned_cols=31 Identities=13% Similarity=0.084 Sum_probs=15.7
Q ss_pred hhccccccc--CCceEEEEEcCCC---CchhHHHHH
Q 026289 9 KLSLESKTQ--GKTYVVLVATGSF---NPPTFMHLR 39 (240)
Q Consensus 9 ~~~~~~~~~--~~~~~i~ifgGSF---nP~H~GHl~ 39 (240)
.|++++..+ ..++++.|.|... +|+|.||..
T Consensus 11 ~~~~~~~~~~~~~~~~~~i~~p~pypng~lHiGH~r 46 (536)
T 4dlp_A 11 TLEAQTQGPGSMSREKYYITTAIAYPNGKPHIGHAY 46 (536)
T ss_dssp -------------CCEEEEEECCBCCSSCCCHHHHH
T ss_pred cccccccCCCcCCCCCEEEeCCCCCCCCCcCcchhH
Confidence 355555532 2234678888877 599999985
No 68
>1uhr_A SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily...; structural genomics, chromatin remodeling; NMR {Mus musculus} SCOP: a.42.1.1
Probab=28.08 E-value=29 Score=23.91 Aligned_cols=18 Identities=17% Similarity=0.265 Sum_probs=14.9
Q ss_pred CCcHHHHHHHHHCCCCCC
Q 026289 219 LTEDKVIDYIRESRLYLN 236 (240)
Q Consensus 219 lvp~~V~~yI~~~~LY~~ 236 (240)
-|-..+++||++|+|...
T Consensus 31 evvk~lW~YIK~n~Lqdp 48 (93)
T 1uhr_A 31 VIIQALWQYIKTHKLQDP 48 (93)
T ss_dssp HHHHHHHHHHHHTTCBCS
T ss_pred HHHHHHHHHHHhccCCCc
Confidence 467789999999999854
No 69
>3fz0_A Nucleoside hydrolase, putative; NH fold, open alpha/beta structure, glycosidase; HET: BTB; 2.50A {Trypanosoma brucei}
Probab=27.78 E-value=17 Score=31.69 Aligned_cols=27 Identities=19% Similarity=0.377 Sum_probs=20.2
Q ss_pred Chhhhccccc-cc---CCc-----eEEEEEcCCCCc
Q 026289 6 PLEKLSLESK-TQ---GKT-----YVVLVATGSFNP 32 (240)
Q Consensus 6 p~~~~~~~~~-~~---~~~-----~~i~ifgGSFnP 32 (240)
|.|||+++++ .+ ++- +.|.+.||+|++
T Consensus 136 PLTNlA~al~~~P~~~~~ig~~kv~~iviMGG~~~~ 171 (360)
T 3fz0_A 136 PLTNVALALRLNPDLFSKLGTDTIPGIVIMNGTSES 171 (360)
T ss_dssp CSHHHHHHHHHCGGGGGGSSCSSSCSEEEECCCSSC
T ss_pred ChHHHHHHHHhChHHHhhhccccCcEEEEECCCccC
Confidence 8899998886 22 344 678999999864
No 70
>3drn_A Peroxiredoxin, bacterioferritin comigratory prote homolog; bacterioferritin comigratory protein, oxidore; HET: CIT; 2.15A {Sulfolobus solfataricus} SCOP: c.47.1.0
Probab=27.39 E-value=1e+02 Score=22.25 Aligned_cols=40 Identities=28% Similarity=0.261 Sum_probs=29.7
Q ss_pred CCceEEEEEc-CCCCchhHHHHHHHHHHHHHhccCCeEEEe
Q 026289 18 GKTYVVLVAT-GSFNPPTFMHLRMFELARDTLNSEGYCVIG 57 (240)
Q Consensus 18 ~~~~~i~ifg-GSFnP~H~GHl~l~~~a~~~~~~~~~~vv~ 57 (240)
++..+++.|. ++++|+=...+..+....+.+...++.+|.
T Consensus 28 gk~~vvl~F~~a~~C~~C~~~~~~l~~~~~~~~~~~v~vv~ 68 (161)
T 3drn_A 28 GKHNIVLYFYPKDDTPGSTREASAFRDNWDLLKDYDVVVIG 68 (161)
T ss_dssp TTSEEEEEECSCTTCHHHHHHHHHHHHTHHHHHTTCEEEEE
T ss_pred CCCCEEEEEEcCCCCCchHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3444788888 999999888887777777777655576663
No 71
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=25.52 E-value=97 Score=24.65 Aligned_cols=34 Identities=12% Similarity=-0.092 Sum_probs=20.1
Q ss_pred ceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCe
Q 026289 20 TYVVLVATGSFNPPTFMHLRMFELARDTLNSEGY 53 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~ 53 (240)
.+.|+|||||=.+..--+...++..-+.+...++
T Consensus 9 m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~ 42 (216)
T 1ydh_A 9 FRKICVFCGSHSGHREVFSDAAIELGNELVKRKI 42 (216)
T ss_dssp CSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTC
T ss_pred CCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCC
Confidence 3479999887765544455555555444433333
No 72
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=25.33 E-value=3.1e+02 Score=23.12 Aligned_cols=81 Identities=17% Similarity=0.169 Sum_probs=47.4
Q ss_pred CChhhhcccccccCCceEEEEEcCCCCch--hHHHHHHHHHHHHHhccCCeEEEeeeecCCCCcc-cc--CCCCCHHHHH
Q 026289 5 LPLEKLSLESKTQGKTYVVLVATGSFNPP--TFMHLRMFELARDTLNSEGYCVIGGYMSPVNDAY-KK--RGLISAEHRI 79 (240)
Q Consensus 5 ~p~~~~~~~~~~~~~~~~i~ifgGSFnP~--H~GHl~l~~~a~~~~~~~~~~vv~~~~~p~~~~~-~k--~~~~~~~~R~ 79 (240)
||-++...+.+..-|...|.|...+..|+ |..-+.++-.|.+..+..++.+|-=|+.=+.+.. .+ ..+++...=.
T Consensus 39 F~dGE~~v~i~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~k~asA~rIt~ViPY~~YaRQDr~~~~~r~pisak~vA 118 (319)
T 3dah_A 39 FSDGEIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALKRASAGRITAAIPYFGYARQDRRPRSARVAISAKVVA 118 (319)
T ss_dssp CTTSCEEEEECSCCBTCEEEEECCCCSSHHHHHHHHHHHHHHHHHTTBSEEEEEESSCTTTTCCSCCTTCCCCCHHHHHH
T ss_pred CCCCCEEEEECCCcCCCeEEEEccCCCCCcHHHHHHHHHHHHHHHcCCcEEEEEccCccccccccccCCCCCCccHHHHH
Confidence 66666666666555556677766666665 5666667777777777677654421322222321 11 2357777777
Q ss_pred HHHHHH
Q 026289 80 NLCNLA 85 (240)
Q Consensus 80 ~Ml~~a 85 (240)
+|++.+
T Consensus 119 ~ll~~~ 124 (319)
T 3dah_A 119 NMLEIA 124 (319)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 777754
No 73
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=24.52 E-value=88 Score=24.40 Aligned_cols=36 Identities=14% Similarity=0.254 Sum_probs=24.0
Q ss_pred ceEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEE
Q 026289 20 TYVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVI 56 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv 56 (240)
.+.|+|||||= +..-.+...++..-+.+...++.+|
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv 48 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLV 48 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEE
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEE
Confidence 47899999987 6666676666666565544444443
No 74
>3eyt_A Uncharacterized protein SPOA0173; thioredoxin-like superfamily protein SPOA0173, silicibacter DSS, structural genomics, PSI-2; 1.95A {Silicibacter pomeroyi}
Probab=23.32 E-value=1.2e+02 Score=21.44 Aligned_cols=38 Identities=21% Similarity=0.374 Sum_probs=28.5
Q ss_pred ceEEEEEcCCCCchhHHH-HHHHHHHHHHhccCCeEEEe
Q 026289 20 TYVVLVATGSFNPPTFMH-LRMFELARDTLNSEGYCVIG 57 (240)
Q Consensus 20 ~~~i~ifgGSFnP~H~GH-l~l~~~a~~~~~~~~~~vv~ 57 (240)
+..++.|.++.+|+=... +..+....+.++.+++.++.
T Consensus 29 k~vlv~f~a~wC~~C~~~~~~~l~~l~~~~~~~~v~~v~ 67 (158)
T 3eyt_A 29 KVIVIEAFQMLCPGCVMHGIPLAQKVRAAFPEDKVAVLG 67 (158)
T ss_dssp SEEEEEEECTTCHHHHHTHHHHHHHHHHHSCTTTEEEEE
T ss_pred CEEEEEEECCcCcchhhhhhHHHHHHHHHhCcCCEEEEE
Confidence 457788999999998876 77777777777655677664
No 75
>2zue_A Arginyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase, nucleotide-binding, protein biosynthesis, ligase/RNA complex; HET: ANP; 2.00A {Pyrococcus horikoshii} PDB: 2zuf_A
Probab=23.12 E-value=46 Score=31.06 Aligned_cols=22 Identities=41% Similarity=0.483 Sum_probs=17.6
Q ss_pred CCceEEEEEcCCCC---chhHHHHH
Q 026289 18 GKTYVVLVATGSFN---PPTFMHLR 39 (240)
Q Consensus 18 ~~~~~i~ifgGSFn---P~H~GHl~ 39 (240)
..+.+|.|.-.|-| |+|.||+.
T Consensus 116 ~~~~~V~ve~~spN~~~~~HiGH~R 140 (629)
T 2zue_A 116 GKGKKVIVEHTSVNPTKPLHMGHAR 140 (629)
T ss_dssp TTTCEEEEECCCCCTTSCCBHHHHH
T ss_pred CCCCEEEEEeeCCCCCCCCccchhH
Confidence 34567888888888 69999995
No 76
>3gkn_A Bacterioferritin comigratory protein; BCP, PRX, atypical 2-Cys, oxidoreduc; HET: BIH; 1.47A {Xanthomonas campestris PV} PDB: 3gkk_A 3gkm_A
Probab=22.99 E-value=1.2e+02 Score=21.62 Aligned_cols=37 Identities=14% Similarity=0.177 Sum_probs=27.6
Q ss_pred eEEEEEc-CCCCchhHHHHHHHHHHHHHhccCCeEEEe
Q 026289 21 YVVLVAT-GSFNPPTFMHLRMFELARDTLNSEGYCVIG 57 (240)
Q Consensus 21 ~~i~ifg-GSFnP~H~GHl~l~~~a~~~~~~~~~~vv~ 57 (240)
..++.|. |++.|+-..++.-+....+.+...++.+|+
T Consensus 37 ~~vl~F~~~~~c~~C~~~~~~l~~~~~~~~~~~~~vv~ 74 (163)
T 3gkn_A 37 WLVIYFYPKDSTPGATTEGLDFNALLPEFDKAGAKILG 74 (163)
T ss_dssp CEEEEECSCTTSHHHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred cEEEEEeCCCCCCcHHHHHHHHHHHHHHHHHCCCEEEE
Confidence 4566666 599999988888888887777655676664
No 77
>3ixr_A Bacterioferritin comigratory protein; alpha beta protein, oxidoreductase; 1.60A {Xylella fastidiosa}
Probab=21.94 E-value=1.8e+02 Score=21.54 Aligned_cols=37 Identities=19% Similarity=0.177 Sum_probs=28.2
Q ss_pred eEEEEEc-CCCCchhHHHHHHHHHHHHHhccCCeEEEe
Q 026289 21 YVVLVAT-GSFNPPTFMHLRMFELARDTLNSEGYCVIG 57 (240)
Q Consensus 21 ~~i~ifg-GSFnP~H~GHl~l~~~a~~~~~~~~~~vv~ 57 (240)
..+++|. +++.|+=...+.-+....+.+...++.+|.
T Consensus 53 ~vvl~f~~~~~c~~C~~el~~l~~l~~~~~~~~~~vv~ 90 (179)
T 3ixr_A 53 WLVLYFYPKDNTPGSSTEGLEFNLLLPQFEQINATVLG 90 (179)
T ss_dssp EEEEEECSCTTSHHHHHHHHHHHHHHHHHHTTTEEEEE
T ss_pred CEEEEEEcCCCCCchHHHHHHHHHHHHHHHHCCCEEEE
Confidence 4667776 999999888887778887777656676663
No 78
>3kij_A Probable glutathione peroxidase 8; human PDI-peroxidase, membrane, oxidoreductase, transmembrane; 1.80A {Homo sapiens} SCOP: c.47.1.0 PDB: 3cyn_A
Probab=20.70 E-value=1.9e+02 Score=21.16 Aligned_cols=37 Identities=11% Similarity=0.038 Sum_probs=30.3
Q ss_pred eEEEEEcCCCCchhHHHHHHHHHHHHHhccCCeEEEe
Q 026289 21 YVVLVATGSFNPPTFMHLRMFELARDTLNSEGYCVIG 57 (240)
Q Consensus 21 ~~i~ifgGSFnP~H~GHl~l~~~a~~~~~~~~~~vv~ 57 (240)
.+++.|.++.+|+-...+..+..+.+.++-.++.+|+
T Consensus 40 ~vlv~F~atwC~~C~~~~p~l~~l~~~~~~~~~~vi~ 76 (180)
T 3kij_A 40 VSLVVNVASDCQLTDRNYLGLKELHKEFGPSHFSVLA 76 (180)
T ss_dssp EEEEEEECSSSTTHHHHHHHHHHHHHHHTTTSEEEEE
T ss_pred EEEEEEEecCCCCcHHHHHHHHHHHHHhccCCeEEEE
Confidence 6788899999999999888888888877655677664
No 79
>1jil_A Tyrrs, tyrosyl-tRNA synthetase; truncation, based inhibitor design, ligase; HET: 485; 2.20A {Staphylococcus aureus} SCOP: c.26.1.1 PDB: 1jij_A* 1jii_A* 1jik_A*
Probab=20.02 E-value=2.5e+02 Score=24.69 Aligned_cols=40 Identities=13% Similarity=-0.029 Sum_probs=19.5
Q ss_pred ChhhhcccccccCCceEEEEEcCCCCchhHHHHHHHHHHHH
Q 026289 6 PLEKLSLESKTQGKTYVVLVATGSFNPPTFMHLRMFELARD 46 (240)
Q Consensus 6 p~~~~~~~~~~~~~~~~i~ifgGSFnP~H~GHl~l~~~a~~ 46 (240)
+-++|...+++++..--.|+=. |=+-+|.||+-.+.....
T Consensus 20 ~~~~L~~~L~~~~~~iy~G~dP-Tg~sLHlGh~v~l~~~~~ 59 (420)
T 1jil_A 20 DEQGIEDLLNKEQVTLYCGADP-TADSLHIGHLLPFLTLRR 59 (420)
T ss_dssp CHHHHHHHHHHSCCEEEEEECC-SSSSCBHHHHHHHHHHHH
T ss_pred CHHHHHHHHcCCCCEEEEeeCC-CCCCccHHHHHHHHHHHH
Confidence 3445655554332222223322 322289999875555443
Done!