Query 026293
Match_columns 240
No_of_seqs 107 out of 131
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 10:07:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/026293.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/026293hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1owxa_ d.58.7.1 (A:) Lupus LA 76.5 0.69 5E-05 32.7 2.5 27 183-209 19-46 (113)
2 d2phcb2 d.74.5.1 (B:2-85) Unch 65.9 2.8 0.00021 28.3 3.6 62 121-196 8-69 (84)
3 d2cq1a1 d.58.7.1 (A:51-138) Po 61.2 3.6 0.00026 27.2 3.4 26 183-208 16-42 (88)
4 d1whya_ d.58.7.1 (A:) Putative 53.1 4.4 0.00032 27.3 2.8 27 183-209 25-52 (97)
5 d2cq3a1 d.58.7.1 (A:110-202) R 48.0 6.9 0.0005 26.1 3.1 26 183-208 19-45 (93)
6 d1p1ta_ d.58.7.1 (A:) Cleavage 47.7 5.6 0.00041 26.8 2.6 26 183-208 16-42 (104)
7 d2d9ia1 d.68.8.1 (A:8-90) Nedd 47.6 5.6 0.00041 26.7 2.6 21 131-152 4-24 (83)
8 d2qifa1 d.58.17.1 (A:1-69) Cop 46.8 8.4 0.00061 24.7 3.3 47 140-196 14-60 (69)
9 d1mxaa2 d.130.1.1 (A:108-231) 46.4 4 0.00029 30.5 1.8 22 19-40 3-24 (124)
10 d1rk8a_ d.58.7.1 (A:) RNA-bind 45.9 6 0.00044 26.1 2.5 26 183-208 15-41 (88)
11 d2adca2 d.58.7.1 (A:444-531) P 45.7 7.9 0.00057 25.3 3.1 27 183-209 18-45 (88)
12 d1cvja2 d.58.7.1 (A:91-179) Po 45.3 6.5 0.00047 25.9 2.6 40 182-222 15-55 (89)
13 d2cqca1 d.58.7.1 (A:109-191) A 44.2 8.5 0.00062 24.8 3.0 25 183-207 17-42 (83)
14 d1l3ka1 d.58.7.1 (A:8-91) Nucl 37.5 9.8 0.00071 25.0 2.5 26 183-208 14-40 (84)
15 d1o13a_ c.55.5.1 (A:) Hypothet 37.0 8.9 0.00065 26.0 2.3 19 7-25 17-37 (107)
16 d1wdea_ c.90.1.1 (A:) Diphthin 37.0 9.6 0.0007 30.4 2.8 28 118-149 1-28 (289)
17 d1x5oa1 d.58.7.1 (A:8-108) RNA 36.8 17 0.0012 24.4 3.8 27 183-209 26-53 (101)
18 d2cq2a1 d.58.7.1 (A:25-125) Al 36.1 4.7 0.00034 27.8 0.7 26 183-208 28-54 (101)
19 d1whwa_ d.58.7.1 (A:) Probable 36.1 8.4 0.00061 25.8 2.0 25 183-207 16-41 (99)
20 d2cpia1 d.58.7.1 (A:101-189) E 35.5 10 0.00076 25.1 2.4 25 183-207 16-44 (89)
21 d1p90a_ c.55.5.2 (A:) NafY cor 35.4 9.5 0.00069 26.9 2.3 18 7-24 20-39 (123)
22 d2f9da1 d.58.7.1 (A:12-125) Pr 35.4 12 0.00085 25.4 2.7 39 182-222 14-53 (114)
23 d1rdua_ c.55.5.1 (A:) Hypothet 34.9 9 0.00065 26.5 2.0 19 6-24 16-36 (116)
24 d2cq0a1 d.58.7.1 (A:231-320) E 34.0 17 0.0012 23.8 3.3 26 183-208 16-42 (90)
25 d2aw0a_ d.58.17.1 (A:) Menkes 33.5 20 0.0015 22.9 3.5 46 141-196 16-61 (72)
26 d2cqia1 d.58.7.1 (A:1-90) Nucl 32.0 9.5 0.00069 25.1 1.7 25 183-207 16-41 (90)
27 d1osda_ d.58.17.1 (A:) Mercuri 31.8 14 0.001 23.8 2.5 46 141-196 16-61 (72)
28 d2cpfa1 d.58.7.1 (A:362-446) P 31.4 14 0.001 23.8 2.4 26 183-208 6-32 (85)
29 d2p02a2 d.130.1.1 (A:148-273) 30.5 10 0.00075 28.2 1.8 21 20-40 2-22 (126)
30 d2vapa2 d.79.2.1 (A:232-354) C 30.2 17 0.0013 26.3 3.1 86 127-232 20-106 (123)
31 d2fsqa1 d.61.1.4 (A:6-237) Put 30.0 22 0.0016 28.7 3.9 55 128-189 133-188 (232)
32 d2cqga1 d.58.7.1 (A:96-185) TA 29.1 16 0.0012 24.3 2.5 26 183-208 16-42 (90)
33 d1b7fa2 d.58.7.1 (A:205-289) S 26.6 24 0.0017 22.7 3.0 25 183-207 14-39 (85)
34 d1eo1a_ c.55.5.1 (A:) Hypothet 26.4 17 0.0012 25.2 2.3 19 7-25 16-36 (124)
35 d2b0ga1 d.58.7.1 (A:1-83) Spli 25.6 22 0.0016 22.8 2.6 27 183-209 16-43 (83)
36 d1fxla1 d.58.7.1 (A:37-118) Hu 25.2 21 0.0015 22.5 2.4 26 183-208 10-36 (82)
37 d1u6fa1 d.58.7.1 (A:1-139) RNA 24.5 15 0.0011 25.7 1.7 26 183-208 50-76 (139)
38 d1fxla2 d.58.7.1 (A:119-203) H 24.5 22 0.0016 23.0 2.5 26 183-208 14-40 (85)
39 d2cqda1 d.58.7.1 (A:1-103) RNA 24.0 17 0.0012 24.5 1.9 26 183-208 18-44 (103)
40 d2adba1 d.58.7.1 (A:177-284) P 23.9 24 0.0017 23.8 2.7 27 183-209 15-42 (108)
41 d1no8a_ d.58.7.1 (A:) Nuclear 23.7 15 0.0011 23.5 1.5 26 183-208 8-34 (78)
42 d1x4aa1 d.58.7.1 (A:9-103) Spl 23.0 23 0.0017 23.3 2.4 28 182-209 21-49 (95)
43 d1x4da1 d.58.7.1 (A:8-96) Matr 22.9 22 0.0016 23.5 2.2 26 183-208 16-43 (89)
44 d2u2fa_ d.58.7.1 (A:) Splicing 22.6 26 0.0019 22.7 2.5 26 183-208 9-35 (85)
45 d1cbfa_ c.90.1.1 (A:) Cobalt p 22.4 23 0.0017 25.7 2.5 30 117-149 6-35 (239)
46 d2adca1 d.58.7.1 (A:335-443) P 22.2 15 0.0011 24.4 1.2 25 184-208 12-37 (109)
47 d1x4ba1 d.58.7.1 (A:8-110) Het 21.9 26 0.0019 23.8 2.6 26 183-208 28-54 (103)
48 d2cpja1 d.58.7.1 (A:65-150) No 21.8 36 0.0026 22.1 3.2 26 183-208 16-42 (86)
49 d1zh5a2 d.58.7.1 (A:105-189) L 21.7 33 0.0024 22.2 3.0 26 183-208 14-40 (85)
50 d1t11a2 d.241.2.1 (A:1-129) Tr 21.3 26 0.0019 25.0 2.5 27 135-161 21-47 (129)
51 d1x4ga1 d.58.7.1 (A:8-103) Nuc 20.8 22 0.0016 23.8 1.9 35 183-222 26-61 (96)
52 d1wf0a_ d.58.7.1 (A:) TAR DNA- 20.7 27 0.002 22.7 2.3 24 183-206 13-37 (88)
53 d2cqba1 d.58.7.1 (A:1-89) Pept 20.6 19 0.0014 23.5 1.5 25 183-207 13-38 (89)
54 d1h2vz_ d.58.7.1 (Z:) CBP20, 2 20.3 30 0.0022 22.8 2.5 26 183-208 15-41 (93)
No 1
>d1owxa_ d.58.7.1 (A:) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=76.49 E-value=0.69 Score=32.75 Aligned_cols=27 Identities=26% Similarity=0.335 Sum_probs=24.1
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEcC
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVDG 209 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~G 209 (240)
||+.++.+.|++.| +||.|..|.++.|
T Consensus 19 L~~~~tee~Lk~~F~~fG~V~~v~i~~~ 46 (113)
T d1owxa_ 19 LDDQTCREDLHILFSNHGEIKWIDFVRG 46 (113)
T ss_dssp CCSSCCHHHHHHHTCSSCCEEEEECCTT
T ss_pred CCCCCCHHHHHHHHHhcCChheEEEecC
Confidence 57799999999999 7999988998865
No 2
>d2phcb2 d.74.5.1 (B:2-85) Uncharacterized protein PH0987 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=65.85 E-value=2.8 Score=28.29 Aligned_cols=62 Identities=18% Similarity=0.164 Sum_probs=46.9
Q ss_pred eEEEEEeeccccCCCCCHHHHHHHHHHhHHhhCCccccccCccCCCCCCCeEEEEEEeecCCCcccccHHHHhhhc
Q 026293 121 KLLFVEMGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGVPHSLQQLLDIERVKSVF 196 (240)
Q Consensus 121 KRlfIEmGMG~DlHGQD~TKAA~RAVrDAI~hNSIp~~~~~~IpG~d~~~MkV~VkIGVP~~~Pe~VD~eaVkavf 196 (240)
.-++||||=.+| .-+...++|..++|..+-.+++.. .+|+.. .|-|-.| |..+|.+.+++.+
T Consensus 8 ~allv~fg~~i~----~~~~~~v~~l~~~l~~~~~~gI~e-~vPsy~--------SllV~yD-p~~i~~~~l~~~l 69 (84)
T d2phcb2 8 SAFLISFGDEIS----EEINDRVHSLAKAIEKESPEWLVE-LVPAYS--------SLLVIYD-PLKASYEEVESYL 69 (84)
T ss_dssp TEEEEECCSCCC----HHHHHHHHHHHHHHHHHCCTTEEE-EEEETT--------EEEEEEC-TTTSCHHHHHHHH
T ss_pred cEEEEEECCcCC----HHHHHHHHHHHHHHHhcCCCCeeE-ecccce--------EEEEEEC-CCcCCHHHHHHHH
Confidence 458999985554 345678889999999999999998 778743 3444556 9999999988754
No 3
>d2cq1a1 d.58.7.1 (A:51-138) Polypyrimidine tract-binding protein 2, PTBP2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=61.22 E-value=3.6 Score=27.16 Aligned_cols=26 Identities=19% Similarity=0.374 Sum_probs=22.7
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~ 208 (240)
+|..++.+.|+++| +||.+..+.+..
T Consensus 16 Lp~~~t~~~L~~~f~~~G~i~~v~~~~ 42 (88)
T d2cq1a1 16 LPGEVTETEVIALGLPFGKVTNILMLK 42 (88)
T ss_dssp CCTTCCHHHHHHTTTTTSCEEEEEEET
T ss_pred CCCCCCHHHHHHHHhcccccccccccc
Confidence 68899999999999 899998887764
No 4
>d1whya_ d.58.7.1 (A:) Putative RNA-binding protein 15B, Rbm15b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=53.10 E-value=4.4 Score=27.33 Aligned_cols=27 Identities=22% Similarity=0.427 Sum_probs=22.8
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEcC
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVDG 209 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~G 209 (240)
||..++.+.|+++| +||++..+.+..+
T Consensus 25 Lp~~~t~~~l~~~f~~~G~i~~~~~~~~ 52 (97)
T d1whya_ 25 LGPNTSLAALAREFDRFGSIRTIDHVKG 52 (97)
T ss_dssp CCSSCCHHHHHHHHHTTSCEEEEEECSS
T ss_pred CCCCCCHHHHHHHHHhhcccceEeeecc
Confidence 57789999999998 8999978877653
No 5
>d2cq3a1 d.58.7.1 (A:110-202) RNA-binding protein 9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.02 E-value=6.9 Score=26.07 Aligned_cols=26 Identities=31% Similarity=0.568 Sum_probs=22.9
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~ 208 (240)
||..++.+.|++.| +||.+..|.++.
T Consensus 19 Lp~~~t~~~L~~~F~~~G~v~~v~~~~ 45 (93)
T d2cq3a1 19 IPFRFRDPDLRQMFGQFGKILDVEIIF 45 (93)
T ss_dssp CCTTCCHHHHHHHGGGTSCEEEEEEEC
T ss_pred CCCCCCHHHHHHHHhhcceeeeccccc
Confidence 68889999999999 799987888874
No 6
>d1p1ta_ d.58.7.1 (A:) Cleavage stimulation factor, 64 kda subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.68 E-value=5.6 Score=26.82 Aligned_cols=26 Identities=19% Similarity=0.355 Sum_probs=22.8
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~ 208 (240)
||..++.+.|++.| +||++..|.+..
T Consensus 16 Lp~~~te~~l~~~f~~~G~i~~v~i~~ 42 (104)
T d1p1ta_ 16 IPYEATEEQLKDIFSEVGPVVSFRLVY 42 (104)
T ss_dssp CCTTSCHHHHHHHHHTTSCCSEEEEEE
T ss_pred CCCcCCHHHHHHhhhcccccccccccc
Confidence 57789999999999 899988888865
No 7
>d2d9ia1 d.68.8.1 (A:8-90) Nedd4-binding protein 2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=47.57 E-value=5.6 Score=26.71 Aligned_cols=21 Identities=24% Similarity=0.357 Sum_probs=15.7
Q ss_pred ccCCCCCHHHHHHHHHHhHHhh
Q 026293 131 YDQHGQDVTAAAMRACRDAISS 152 (240)
Q Consensus 131 ~DlHGQD~TKAA~RAVrDAI~h 152 (240)
+||||..... |.+++++.|..
T Consensus 4 iDLHG~~~~e-A~~~l~~~l~~ 24 (83)
T d2d9ia1 4 LDLHGLHVDE-ALEHLMRVLEK 24 (83)
T ss_dssp EECTTSCHHH-HHHHHHHHHHH
T ss_pred EECCCCCHHH-HHHHHHHHHHH
Confidence 6999997766 56777777754
No 8
>d2qifa1 d.58.17.1 (A:1-69) Copper chaperone {Bacillus subtilis, CopZ [TaxId: 1423]}
Probab=46.79 E-value=8.4 Score=24.69 Aligned_cols=47 Identities=9% Similarity=0.230 Sum_probs=35.3
Q ss_pred HHHHHHHHhHHhhCCccccccCccCCCCCCCeEEEEEEeecCCCcccccHHHHhhhc
Q 026293 140 AAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGVPHSLQQLLDIERVKSVF 196 (240)
Q Consensus 140 KAA~RAVrDAI~hNSIp~~~~~~IpG~d~~~MkV~VkIGVP~~~Pe~VD~eaVkavf 196 (240)
..+...++.||+. +|++.. .-+++..-++.|+. + |+++|.+++++.+
T Consensus 14 ~~C~~~Ie~~l~~--~~GV~~---v~v~~~~~~v~v~~----d-~~~~~~~~i~~~i 60 (69)
T d2qifa1 14 QHCVKAVETSVGE--LDGVSA---VHVNLEAGKVDVSF----D-ADKVSVKDIADAI 60 (69)
T ss_dssp HHHHHHHHHHHHT--STTEEE---EEEETTTTEEEEEE----C-TTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhc--CCCceE---EEEECCCCEEEEEE----C-CCCCCHHHHHHHH
Confidence 3678889999987 588776 34567777777777 4 7889999887754
No 9
>d1mxaa2 d.130.1.1 (A:108-231) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]}
Probab=46.35 E-value=4 Score=30.51 Aligned_cols=22 Identities=32% Similarity=0.490 Sum_probs=18.9
Q ss_pred EecCCCCCceeeEeeeeecccc
Q 026293 19 DVKDDTAGLSTTVFGYRCKEMS 40 (240)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~ 40 (240)
|.+|.-||=.-.+|||-|.|-.
T Consensus 3 ~~~~~GAGDQGimfGYA~~ET~ 24 (124)
T d1mxaa2 3 DPLEQGAGDQGLMFGYATNETD 24 (124)
T ss_dssp SGGGCCCSSCEEEEEEEETTST
T ss_pred ChhccCCCcceEeeeEEcCCcc
Confidence 4578889999999999999964
No 10
>d1rk8a_ d.58.7.1 (A:) RNA-binding protein 8 {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=45.90 E-value=6 Score=26.13 Aligned_cols=26 Identities=15% Similarity=0.401 Sum_probs=22.6
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~ 208 (240)
||..++.+.|++.| +||++.+|+++.
T Consensus 15 L~~~~t~~~l~~~F~~~G~i~~v~i~~ 41 (88)
T d1rk8a_ 15 IHEEAQEDEIQEKFCDYGEIKNIHLNL 41 (88)
T ss_dssp CCTTCCHHHHHHHHGGGSCEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHcCCcccccccc
Confidence 68899999999999 699988888864
No 11
>d2adca2 d.58.7.1 (A:444-531) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.74 E-value=7.9 Score=25.26 Aligned_cols=27 Identities=15% Similarity=0.145 Sum_probs=22.2
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEcC
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVDG 209 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~G 209 (240)
+|..++.+.|++.| +||.++.+....+
T Consensus 18 Lp~~~te~~l~~~F~~~G~v~~~~~~~~ 45 (88)
T d2adca2 18 IPPSVSEEDLKVLFSSNGGVVKGFKFFQ 45 (88)
T ss_dssp CCTTCCHHHHHHHHHTTSCCEEEEEECS
T ss_pred CCCCCCHHHHHHHhhccCCEEEEEEeee
Confidence 68899999999999 8999866665544
No 12
>d1cvja2 d.58.7.1 (A:91-179) Poly(A)-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=45.29 E-value=6.5 Score=25.93 Aligned_cols=40 Identities=25% Similarity=0.395 Sum_probs=28.3
Q ss_pred CCcccccHHHHhhhc-CCCceeeEEEEcCCcccccCceeccC
Q 026293 182 SLQQLLDIERVKSVF-PYGKILDVEVVDGGLICSSGVHVAEL 222 (240)
Q Consensus 182 ~~Pe~VD~eaVkavf-PYG~v~tVeVV~GGL~v~sGI~ipe~ 222 (240)
.||..++.+.|++.| +||.+.++.++..- ..+.|.+.=++
T Consensus 15 nLp~~~t~~~l~~~F~~~G~v~~~~i~~~~-~~~kg~afV~f 55 (89)
T d1cvja2 15 NLDKSIDNKALYDTFSAFGNILSCKVVCDE-NGSKGYGFVHF 55 (89)
T ss_dssp SCCSSCCHHHHHHHHHTTSCEEEEEECCBT-TBCCSCEEEEE
T ss_pred CCCCCCCHHHHHHHHHhcCCceEEEEEeec-CCCcceeEEEE
Confidence 368899999999999 79998788876532 11345544444
No 13
>d2cqca1 d.58.7.1 (A:109-191) Arginine/serine-rich splicing factor 10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=44.21 E-value=8.5 Score=24.82 Aligned_cols=25 Identities=36% Similarity=0.595 Sum_probs=22.3
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEE
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVV 207 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV 207 (240)
||..++.+.|++.| +||.+.+|.++
T Consensus 17 L~~~~te~~l~~~F~~~G~i~~v~i~ 42 (83)
T d2cqca1 17 LSLYTTERDLREVFSKYGPIADVSIV 42 (83)
T ss_dssp CCSSCCHHHHHHHHHTTSCEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHhCCCcccccc
Confidence 68899999999999 79998788876
No 14
>d1l3ka1 d.58.7.1 (A:8-91) Nuclear ribonucleoprotein A1 (RNP A1, UP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.45 E-value=9.8 Score=24.95 Aligned_cols=26 Identities=27% Similarity=0.365 Sum_probs=22.6
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~ 208 (240)
+|..++.+.|++.| .||++..+.++.
T Consensus 14 lp~~~te~~l~~~F~~~G~i~~v~i~~ 40 (84)
T d1l3ka1 14 LSFETTDESLRSHFEQWGTLTDCVVMR 40 (84)
T ss_dssp CCTTCCHHHHHHHHGGGSCEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHhhccccceeecc
Confidence 68899999999999 699998888763
No 15
>d1o13a_ c.55.5.1 (A:) Hypothetical protein TM1816 {Thermotoga maritima [TaxId: 2336]}
Probab=37.05 E-value=8.9 Score=25.96 Aligned_cols=19 Identities=37% Similarity=0.805 Sum_probs=15.6
Q ss_pred ccccccc--eEEEEEecCCCC
Q 026293 7 IEGHFGQ--YVSIFDVKDDTA 25 (240)
Q Consensus 7 ~~~~~~~--~~~~~~~~~~~~ 25 (240)
+..|||+ |.-|||++|+..
T Consensus 17 V~~hFG~A~~F~I~d~~~~~~ 37 (107)
T d1o13a_ 17 ISEHFGRAPYFAFVKVKNNAI 37 (107)
T ss_dssp BCSCSTTCSEEEEEEEETTEE
T ss_pred cccccCccCEEEEEEecCCeE
Confidence 7789994 899999987743
No 16
>d1wdea_ c.90.1.1 (A:) Diphthine synthase, DphB {Aeropyrum pernix [TaxId: 56636]}
Probab=37.03 E-value=9.6 Score=30.42 Aligned_cols=28 Identities=32% Similarity=0.338 Sum_probs=24.8
Q ss_pred CCceEEEEEeeccccCCCCCHHHHHHHHHHhH
Q 026293 118 PPMKLLFVEMGVGYDQHGQDVTAAAMRACRDA 149 (240)
Q Consensus 118 ~~mKRlfIEmGMG~DlHGQD~TKAA~RAVrDA 149 (240)
+.|+.+||=+|.| | +|.|-.|.||+|+|
T Consensus 1 ~~~~l~iVGlGpG-~---eliTlrA~~~L~~a 28 (289)
T d1wdea_ 1 EAVTLLLVGWGYA-P---GMQTLEALDAVRRA 28 (289)
T ss_dssp CCCEEEEEECBSS-T---TCCCHHHHHHHHHC
T ss_pred CCcEEEEEEeccC-c---hHHHHHHHHHHHcC
Confidence 3689999999998 6 48999999999988
No 17
>d1x5oa1 d.58.7.1 (A:8-108) RNA-binding motif, single-stranded-interacting protein 1, RBMS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.78 E-value=17 Score=24.35 Aligned_cols=27 Identities=15% Similarity=0.578 Sum_probs=22.2
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEcC
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVDG 209 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~G 209 (240)
||..++.+.|++.| +||.+..+.+...
T Consensus 26 Lp~~~te~~L~~~F~~~G~i~~~~~~~~ 53 (101)
T d1x5oa1 26 LPLSMDEQELENMLKPFGQVISTRILRD 53 (101)
T ss_dssp CCTTCCHHHHHHTTTTTSCEEEEEEEEC
T ss_pred CCCCCCHHHHHHHHhhcccccceeeecc
Confidence 68899999999999 5999866666643
No 18
>d2cq2a1 d.58.7.1 (A:25-125) Alkylation repair AlkB homolog 8, ALKBH8 {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.14 E-value=4.7 Score=27.84 Aligned_cols=26 Identities=12% Similarity=0.097 Sum_probs=21.8
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~ 208 (240)
||..++.+.|+++| +||.+..|.+..
T Consensus 28 L~~~vte~~L~~~F~~~G~i~~i~~~~ 54 (101)
T d2cq2a1 28 LGNGVSRNQLLPVLEKCGLVDALLMPP 54 (101)
T ss_dssp GGGTCCHHHHHHHHHHHSCEEEEECCT
T ss_pred CCCCCCHHHHHHHHHhhCcccEEeecc
Confidence 58899999999999 899986676554
No 19
>d1whwa_ d.58.7.1 (A:) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=36.05 E-value=8.4 Score=25.75 Aligned_cols=25 Identities=20% Similarity=0.386 Sum_probs=21.6
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEE
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVV 207 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV 207 (240)
||..++.+.|++.| .||.+..+.+.
T Consensus 16 L~~~~t~~~l~~~F~~~g~v~~v~i~ 41 (99)
T d1whwa_ 16 LSYTSSEEDLEKLFSAYGPLSELHYP 41 (99)
T ss_dssp CCTTCCHHHHHHHHHTTSCEEEEECC
T ss_pred CCCcCCHHHHHHHHHhcCCceeeeec
Confidence 68899999999998 79998777765
No 20
>d2cpia1 d.58.7.1 (A:101-189) E3 ubiquitin protein ligase CNOT4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=35.54 E-value=10 Score=25.08 Aligned_cols=25 Identities=36% Similarity=0.437 Sum_probs=19.2
Q ss_pred CcccccHHHH---hhhc-CCCceeeEEEE
Q 026293 183 LQQLLDIERV---KSVF-PYGKILDVEVV 207 (240)
Q Consensus 183 ~Pe~VD~eaV---kavf-PYG~v~tVeVV 207 (240)
||..+..|.| ++.| +||++..|.+.
T Consensus 16 Lp~~~t~~~l~~~~e~F~~~G~I~~v~i~ 44 (89)
T d2cpia1 16 LSQRLADPEVLKRPEYFGKFGKIHKVVIN 44 (89)
T ss_dssp ECTTTCCHHHHHSTTTTTTTSCEEEEEEE
T ss_pred CCCccCHHHHHHHHHHhcccCCceEEEEe
Confidence 4667777777 5666 89999888775
No 21
>d1p90a_ c.55.5.2 (A:) NafY core domain {Azotobacter vinelandii [TaxId: 354]}
Probab=35.43 E-value=9.5 Score=26.85 Aligned_cols=18 Identities=28% Similarity=0.757 Sum_probs=15.3
Q ss_pred ccccccc--eEEEEEecCCC
Q 026293 7 IEGHFGQ--YVSIFDVKDDT 24 (240)
Q Consensus 7 ~~~~~~~--~~~~~~~~~~~ 24 (240)
|.+|||. |.-|||+.++.
T Consensus 20 V~~HFG~A~~F~Iyev~~~~ 39 (123)
T d1p90a_ 20 LDGHFGSCLRFLVYQVSAKD 39 (123)
T ss_dssp ECCBTTTCSEEEEEEEESSC
T ss_pred ecccCccCCEEEEEEecCCc
Confidence 6789995 89999998874
No 22
>d2f9da1 d.58.7.1 (A:12-125) Pre-mRNA branch site protein p14 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.37 E-value=12 Score=25.36 Aligned_cols=39 Identities=21% Similarity=0.313 Sum_probs=29.3
Q ss_pred CCcccccHHHHhhhcC-CCceeeEEEEcCCcccccCceeccC
Q 026293 182 SLQQLLDIERVKSVFP-YGKILDVEVVDGGLICSSGVHVAEL 222 (240)
Q Consensus 182 ~~Pe~VD~eaVkavfP-YG~v~tVeVV~GGL~v~sGI~ipe~ 222 (240)
.||..++.+.|+++|- ||++..|.+..-|- +.|.+.=++
T Consensus 14 nLp~~~te~~l~~~F~~~G~v~~i~~~~~~~--~kG~afV~f 53 (114)
T d2f9da1 14 NLPYKITAEEMYDIFGKYGPIRQIRVGNTPE--TRGTAYVVY 53 (114)
T ss_dssp SCCTTCCHHHHHHHHHTTSCEEEEEEECSTT--TTTEEEEEE
T ss_pred CCCCCCCHHHHHHHHhhcCCeEeecccccCC--cCCeEEEEE
Confidence 3688999999999996 99998999886652 245544443
No 23
>d1rdua_ c.55.5.1 (A:) Hypothetical protein TM1290 {Thermotoga maritima [TaxId: 2336]}
Probab=34.88 E-value=9 Score=26.48 Aligned_cols=19 Identities=21% Similarity=0.566 Sum_probs=15.6
Q ss_pred cccccccc--eEEEEEecCCC
Q 026293 6 DIEGHFGQ--YVSIFDVKDDT 24 (240)
Q Consensus 6 ~~~~~~~~--~~~~~~~~~~~ 24 (240)
.|.+|||+ |.-|||++|+.
T Consensus 16 ~v~~HFG~A~~F~I~d~~~~~ 36 (116)
T d1rdua_ 16 MVSDRFARAEYFIIYDTESGN 36 (116)
T ss_dssp BBCSCGGGCSEEEEEETTTTE
T ss_pred ccccccCCCCEEEEEEecCCe
Confidence 47899995 88999998863
No 24
>d2cq0a1 d.58.7.1 (A:231-320) Eukaryotic translation initiation factor 3 subunit 4 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.04 E-value=17 Score=23.79 Aligned_cols=26 Identities=15% Similarity=0.319 Sum_probs=22.9
Q ss_pred CcccccHHHHhhhcC-CCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeVV~ 208 (240)
||..++.+.|+++|- ||++..|.++.
T Consensus 16 Lp~~~t~~~l~~~f~~~G~v~~v~i~~ 42 (90)
T d2cq0a1 16 LSEDTRETDLQELFRPFGSISRIYLAK 42 (90)
T ss_dssp CCTTCCHHHHHTTSTTTCCEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHhcccccccccc
Confidence 688999999999997 99987888764
No 25
>d2aw0a_ d.58.17.1 (A:) Menkes copper-transporting ATPase {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.46 E-value=20 Score=22.86 Aligned_cols=46 Identities=15% Similarity=0.252 Sum_probs=33.5
Q ss_pred HHHHHHHhHHhhCCccccccCccCCCCCCCeEEEEEEeecCCCcccccHHHHhhhc
Q 026293 141 AAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGVPHSLQQLLDIERVKSVF 196 (240)
Q Consensus 141 AA~RAVrDAI~hNSIp~~~~~~IpG~d~~~MkV~VkIGVP~~~Pe~VD~eaVkavf 196 (240)
++...++.||.+. |++.. .-+++..-++.|+. + |+.+|.++|++.+
T Consensus 16 ~C~~~Ie~~l~~~--~GV~~---v~v~~~~~~v~v~~----d-~~~~~~~~i~~~i 61 (72)
T d2aw0a_ 16 SCVQSIEGVISKK--PGVKS---IRVSLANSNGTVEY----D-PLLTSPETLRGAI 61 (72)
T ss_dssp HHHHHHHHHHHTS--TTCCC---EEEETTTTEEEEEE----C-TTTCCHHHHHHHH
T ss_pred HHHHHHHHHHhcC--CCcEE---EEEECCCCEEEEEE----C-CCCCCHHHHHHHH
Confidence 6788888888874 77765 33456666677765 4 8889999887764
No 26
>d2cqia1 d.58.7.1 (A:1-90) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.01 E-value=9.5 Score=25.09 Aligned_cols=25 Identities=12% Similarity=0.202 Sum_probs=21.5
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEE
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVV 207 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV 207 (240)
||..++.+.|++.| .||.+..|.+.
T Consensus 16 Lp~~~te~~l~~~F~~~G~i~~v~i~ 41 (90)
T d2cqia1 16 LSRDVTEVLILQLFSQIGPCKSCKMI 41 (90)
T ss_dssp CCTTCCHHHHHHHHHHHSCEEEEEEE
T ss_pred CCCCCCHHHHHHHHHhcCCceeeeee
Confidence 68899999999998 59998777765
No 27
>d1osda_ d.58.17.1 (A:) Mercuric ion binding protein MerP {Ralstonia metallidurans CH34 [TaxId: 266264]}
Probab=31.76 E-value=14 Score=23.81 Aligned_cols=46 Identities=15% Similarity=0.301 Sum_probs=34.5
Q ss_pred HHHHHHHhHHhhCCccccccCccCCCCCCCeEEEEEEeecCCCcccccHHHHhhhc
Q 026293 141 AAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGVPHSLQQLLDIERVKSVF 196 (240)
Q Consensus 141 AA~RAVrDAI~hNSIp~~~~~~IpG~d~~~MkV~VkIGVP~~~Pe~VD~eaVkavf 196 (240)
++++.++.+|.+ +|++.. .-+++..-++.|+. + |+.+|.+.|++.+
T Consensus 16 ~C~~~Ie~~l~~--~~gV~~---v~v~~~~~~~~v~~----~-~~~~~~~~i~~~i 61 (72)
T d1osda_ 16 ACPITVKKAISK--VEGVSK---VDVTFETRQAVVTF----D-DAKTSVQKLTKAT 61 (72)
T ss_dssp THHHHHHHHHHT--STTEEE---EEEETTTTEEEEEE----E-TTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHc--CCCcEE---EEEEcCCCEEEEEE----C-CCCCCHHHHHHHH
Confidence 577888888887 487776 34567777777776 4 7889999888765
No 28
>d2cpfa1 d.58.7.1 (A:362-446) Probable RNA-binding protein 19, Rbm19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.42 E-value=14 Score=23.77 Aligned_cols=26 Identities=27% Similarity=0.317 Sum_probs=22.0
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~ 208 (240)
||..++.+.|++.| +||++.+++++.
T Consensus 6 Lp~~~t~~~l~~~F~~~G~v~~v~i~~ 32 (85)
T d2cpfa1 6 LNFSTTEETLKGVFSKVGAIKSCTISK 32 (85)
T ss_dssp CCTTCCHHHHHHHHHTTSCEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHhCCccccceec
Confidence 68899999999998 599987888763
No 29
>d2p02a2 d.130.1.1 (A:148-273) S-adenosylmethionine synthetase {Human (Homo sapiens), isoform type-2 [TaxId: 9606]}
Probab=30.46 E-value=10 Score=28.19 Aligned_cols=21 Identities=33% Similarity=0.438 Sum_probs=16.9
Q ss_pred ecCCCCCceeeEeeeeecccc
Q 026293 20 VKDDTAGLSTTVFGYRCKEMS 40 (240)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~ 40 (240)
-+|--||=.-.+|||-|.|-.
T Consensus 2 ~~~~GAGDQGimfGYA~~ET~ 22 (126)
T d2p02a2 2 EEDIGAGDQGLMFGYATDETE 22 (126)
T ss_dssp GGGCCBSSCEEEEEEEETTST
T ss_pred ccccCCCcceeeeeeEcCCCc
Confidence 355678888999999999954
No 30
>d2vapa2 d.79.2.1 (A:232-354) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=30.19 E-value=17 Score=26.32 Aligned_cols=86 Identities=16% Similarity=0.228 Sum_probs=41.2
Q ss_pred eeccccCCCCCHHHHHHHHHHhHHhhCCccccccCccCCCCCCCeEEEEEEeecCCCcccccH-HHHhhhcCCCceeeEE
Q 026293 127 MGVGYDQHGQDVTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGVPHSLQQLLDI-ERVKSVFPYGKILDVE 205 (240)
Q Consensus 127 mGMG~DlHGQD~TKAA~RAVrDAI~hNSIp~~~~~~IpG~d~~~MkV~VkIGVP~~~Pe~VD~-eaVkavfPYG~v~tVe 205 (240)
||+|.-- | ...|.+|+++||.+ |++.. .+-| -....|+++-+=.-++.|--+. +.|++.+. . ..+
T Consensus 20 ~giG~a~-g---~~ra~~Av~~Al~s---pLl~~-~i~~--A~g~Lv~i~~~~d~~l~e~~~~~~~i~~~~~--~--da~ 85 (123)
T d2vapa2 20 IGIGESD-S---EKRAKEAVSMALNS---PLLDV-DIDG--ATGALIHVMGPEDLTLEEAREVVATVSSRLD--P--NAT 85 (123)
T ss_dssp EEEEEEC-S---TTHHHHHHHHHHTC---TTCCS-CGGG--CCEEEEEEEECTTCCHHHHHHHHHHHHHHSC--T--TCE
T ss_pred EEeeccC-C---CchHHHHHHHHHhC---cccCC-Cccc--ccEEEEEEecCCCccHHHHHHHHHHHHHhcC--C--Ccc
Confidence 4555422 3 34577778888875 44332 2222 3456666666522222222222 45555553 2 345
Q ss_pred EEcCCcccccCceeccCCCCCCcEEEE
Q 026293 206 VVDGGLICSSGVHVAELGDKNDDCYIV 232 (240)
Q Consensus 206 VV~GGL~v~sGI~ipe~GDknD~~vIA 232 (240)
++-|= .+ . |+++|+-.-++||
T Consensus 86 ii~G~-~~-d----~~l~d~i~VtiIA 106 (123)
T d2vapa2 86 IIWGA-TI-D----ENLENTVRVLLVI 106 (123)
T ss_dssp EEEEE-EE-C----TTCSSCEEEEEEE
T ss_pred EEEEE-EE-C----CcCCCeEEEEEEE
Confidence 66663 32 2 6676532334443
No 31
>d2fsqa1 d.61.1.4 (A:6-237) Putative phosphoesterase Atu0111 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=30.04 E-value=22 Score=28.70 Aligned_cols=55 Identities=18% Similarity=0.236 Sum_probs=37.9
Q ss_pred eccccCCCCC-HHHHHHHHHHhHHhhCCccccccCccCCCCCCCeEEEEEEeecCCCcccccH
Q 026293 128 GVGYDQHGQD-VTAAAMRACRDAISSNSIPAFRRGSIPGVSFEQMKLLIKLGVPHSLQQLLDI 189 (240)
Q Consensus 128 GMG~DlHGQD-~TKAA~RAVrDAI~hNSIp~~~~~~IpG~d~~~MkV~VkIGVP~~~Pe~VD~ 189 (240)
|.|+=|-+.| -+.++.|++||+|+. +-+++. + +++..+-||++|-....++..+.
T Consensus 133 ~~~v~L~p~~e~d~~~L~~~R~~l~~--l~gi~~---~--~h~~Y~fHITLaY~l~~l~~~e~ 188 (232)
T d2fsqa1 133 PVGMVMKGATAEDDSIVALWRDTFAD--FFGYRH---P--DHDTYEFHITLSYIVSWFEPECL 188 (232)
T ss_dssp TTEEEEEESSHHHHHHHHHHHHHHHH--HHTCCC---T--TGGGCCEEEECEEESSCBCGGGH
T ss_pred ccEEEEecCCHHHHHHHHHHHHHHHH--HhccCC---C--CCceeEEEEEEEeccCCCChHHH
Confidence 5566666644 567889999999998 444443 2 47789999999987643344443
No 32
>d2cqga1 d.58.7.1 (A:96-185) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.12 E-value=16 Score=24.33 Aligned_cols=26 Identities=27% Similarity=0.414 Sum_probs=22.9
Q ss_pred CcccccHHHHhhhcC-CCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeVV~ 208 (240)
||..++.+.|+++|- ||.+..++++.
T Consensus 16 Lp~~~te~~l~~~F~~~G~i~~v~i~~ 42 (90)
T d2cqga1 16 LPWKTTEQDLKEYFSTFGEVLMVQVKK 42 (90)
T ss_dssp CCSSCCHHHHHHHHGGGSCEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHhhcccceeeecc
Confidence 688999999999997 99998888875
No 33
>d1b7fa2 d.58.7.1 (A:205-289) Sex-lethal protein {Drosophila melanogaster [TaxId: 7227]}
Probab=26.62 E-value=24 Score=22.68 Aligned_cols=25 Identities=20% Similarity=0.598 Sum_probs=21.9
Q ss_pred CcccccHHHHhhhcC-CCceeeEEEE
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEVV 207 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeVV 207 (240)
+|..++.+.|+++|- ||++..++++
T Consensus 14 lp~~~te~~l~~~F~~~G~i~~~~~~ 39 (85)
T d1b7fa2 14 LPRTITDDQLDTIFGKYGSIVQKNIL 39 (85)
T ss_dssp CCTTCCHHHHHHHHTSSSCEEEEEEE
T ss_pred CCCCCCHHHHHHHHHhhCCEeeeeee
Confidence 588899999999996 9998788876
No 34
>d1eo1a_ c.55.5.1 (A:) Hypothetical protein MTH1175 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=26.43 E-value=17 Score=25.17 Aligned_cols=19 Identities=26% Similarity=0.597 Sum_probs=15.5
Q ss_pred cccccc--ceEEEEEecCCCC
Q 026293 7 IEGHFG--QYVSIFDVKDDTA 25 (240)
Q Consensus 7 ~~~~~~--~~~~~~~~~~~~~ 25 (240)
|..||| .|.-|||++++..
T Consensus 16 V~~HFG~A~~f~I~dv~~~~~ 36 (124)
T d1eo1a_ 16 VSRFFGRAPYFMIVEMKKGNI 36 (124)
T ss_dssp SCSCCSSCSCEEEEEESSSSE
T ss_pred cccccccCCEEEEEEecCCcE
Confidence 778999 5899999977653
No 35
>d2b0ga1 d.58.7.1 (A:1-83) Splicesomal U1A protein {Drosophila melanogaster [TaxId: 7227]}
Probab=25.55 E-value=22 Score=22.81 Aligned_cols=27 Identities=15% Similarity=0.228 Sum_probs=23.3
Q ss_pred CcccccHHHHhhhcC-CCceeeEEEEcC
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEVVDG 209 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeVV~G 209 (240)
+|..++.+.|+++|= ||.+..++++.+
T Consensus 16 Lp~~~t~~~l~~~f~~~G~i~~v~~~~~ 43 (83)
T d2b0ga1 16 LPEETNEMMLSMLFNQFPGFKEVRLVPN 43 (83)
T ss_dssp CCTTCCHHHHHHHHTTSTTEEEEEECTT
T ss_pred CCCCCCHHHHHhhhccCccEEEeeeecc
Confidence 688999999999996 999888888754
No 36
>d1fxla1 d.58.7.1 (A:37-118) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.16 E-value=21 Score=22.52 Aligned_cols=26 Identities=31% Similarity=0.456 Sum_probs=22.6
Q ss_pred CcccccHHHHhhhcC-CCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeVV~ 208 (240)
||..++.+.|++.|- ||.+..+++..
T Consensus 10 Lp~~~te~~l~~~f~~~G~v~~v~i~~ 36 (82)
T d1fxla1 10 LPQNMTQEEFRSLFGSIGEIESCKLVR 36 (82)
T ss_dssp CCTTCCHHHHHHHHHTTSCEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHhCCccccccee
Confidence 688999999999995 99988888864
No 37
>d1u6fa1 d.58.7.1 (A:1-139) RNA-binding protein UBP1 {Trypanosoma cruzi [TaxId: 5693]}
Probab=24.50 E-value=15 Score=25.74 Aligned_cols=26 Identities=27% Similarity=0.528 Sum_probs=22.6
Q ss_pred CcccccHHHHhhhcC-CCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeVV~ 208 (240)
||..++.+.|+++|- ||++.+|.++.
T Consensus 50 Lp~~~te~~l~~~F~~~G~i~~v~i~~ 76 (139)
T d1u6fa1 50 IPTTVDEVQLRQLFERYGPIESVKIVC 76 (139)
T ss_dssp CSTTCCHHHHHHHHHHHSCEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHhhcccccccccc
Confidence 688899999999997 99998888863
No 38
>d1fxla2 d.58.7.1 (A:119-203) Hu antigen D (Hud) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.50 E-value=22 Score=22.98 Aligned_cols=26 Identities=19% Similarity=0.567 Sum_probs=22.6
Q ss_pred CcccccHHHHhhhcC-CCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeVV~ 208 (240)
||..++.+.|+++|= ||++..++++.
T Consensus 14 Lp~~~te~~L~~~F~~~G~v~~v~i~~ 40 (85)
T d1fxla2 14 LPKTMTQKELEQLFSQYGRIITSRILV 40 (85)
T ss_dssp CCTTCCHHHHHHHHGGGSCEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHhCCcccccccc
Confidence 688899999999995 99998888874
No 39
>d2cqda1 d.58.7.1 (A:1-103) RNA-binding region containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.97 E-value=17 Score=24.51 Aligned_cols=26 Identities=19% Similarity=0.331 Sum_probs=22.3
Q ss_pred CcccccHHHHhhhcC-CCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeVV~ 208 (240)
||..++.+.|++.|- ||++.+|.++.
T Consensus 18 Lp~~~te~~l~~~F~~~G~i~~v~i~~ 44 (103)
T d2cqda1 18 LPYHTTDASLRKYFEGFGDIEEAVVIT 44 (103)
T ss_dssp CCSSCCHHHHHHHHHTTSCEEEEEESC
T ss_pred CCCcCcHHHHHHHHhhcccccceeccc
Confidence 688999999999886 99987888764
No 40
>d2adba1 d.58.7.1 (A:177-284) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.93 E-value=24 Score=23.75 Aligned_cols=27 Identities=15% Similarity=0.416 Sum_probs=23.4
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEcC
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVDG 209 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~G 209 (240)
||..|+.+.|+++| +||.+..+.+...
T Consensus 15 L~~~vte~~L~~~F~~~G~i~~~~i~~~ 42 (108)
T d2adba1 15 LFYPVTLDVLHQIFSKFGTVLKIITFTK 42 (108)
T ss_dssp CCSTTHHHHHHHHHTTTSCEEEEEEEEE
T ss_pred cCCCCCHHHHHHHHccCCcEEEEEEEee
Confidence 79999999999999 5999988888754
No 41
>d1no8a_ d.58.7.1 (A:) Nuclear factor Aly {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.75 E-value=15 Score=23.49 Aligned_cols=26 Identities=15% Similarity=0.280 Sum_probs=22.5
Q ss_pred CcccccHHHHhhhcC-CCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeVV~ 208 (240)
+|..++.+.|++.|- ||.+..+++..
T Consensus 8 Lp~~~~~~~l~~~F~~~G~v~~~~i~~ 34 (78)
T d1no8a_ 8 LDFGVSDADIQELFAEFGTLKKAAVHY 34 (78)
T ss_dssp CCTTCCHHHHHHHHHHHSCEEEEEESC
T ss_pred CCCCCCHHHHHHHHHHhCCCeEEEEEE
Confidence 688999999999996 99987888763
No 42
>d1x4aa1 d.58.7.1 (A:9-103) Splicing factor, arginine/serine-rich 1, SFRS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.00 E-value=23 Score=23.28 Aligned_cols=28 Identities=25% Similarity=0.542 Sum_probs=22.5
Q ss_pred CCcccccHHHHhhhc-CCCceeeEEEEcC
Q 026293 182 SLQQLLDIERVKSVF-PYGKILDVEVVDG 209 (240)
Q Consensus 182 ~~Pe~VD~eaVkavf-PYG~v~tVeVV~G 209 (240)
.+|..++.+.|+++| .||.+..+.+..-
T Consensus 21 nLp~~~t~~~l~~~F~~~G~v~~~~~~~~ 49 (95)
T d1x4aa1 21 NLPPDIRTKDIEDVFYKYGAIRDIDLKNR 49 (95)
T ss_dssp SCCTTCCHHHHHHHHGGGSCEEEEEECCS
T ss_pred CCCCCCCHHHHHHHHhcCCceEEEEeccc
Confidence 368899999999999 5999866666543
No 43
>d1x4da1 d.58.7.1 (A:8-96) Matrin 3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.88 E-value=22 Score=23.50 Aligned_cols=26 Identities=15% Similarity=0.220 Sum_probs=19.7
Q ss_pred Cccc-ccHHHHhhhc-CCCceeeEEEEc
Q 026293 183 LQQL-LDIERVKSVF-PYGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~-VD~eaVkavf-PYG~v~tVeVV~ 208 (240)
+|.. +..+.|.++| |||++.++.+..
T Consensus 16 l~~~~~t~~eL~~lF~~fG~I~~i~i~~ 43 (89)
T d1x4da1 16 FQRGKNLRYQLLQLVEPFGVISNHLILN 43 (89)
T ss_dssp CCCSSSHHHHHHTTTGGGSCEEEEEECS
T ss_pred CCCCcCCHHHHHHHHHhhCCeEEEEeec
Confidence 4665 6677788887 699998888764
No 44
>d2u2fa_ d.58.7.1 (A:) Splicing factor U2AF 65 KDa subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.56 E-value=26 Score=22.71 Aligned_cols=26 Identities=23% Similarity=0.514 Sum_probs=22.9
Q ss_pred CcccccHHHHhhhcC-CCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeVV~ 208 (240)
+|..++.+.|++.|= ||++.+++++.
T Consensus 9 lp~~~te~~l~~~F~~~G~v~~v~i~~ 35 (85)
T d2u2fa_ 9 LPNYLNDDQVKELLTSFGPLKAFNLVK 35 (85)
T ss_dssp CCSSCCSHHHHHHHTSSSCEEEEEEEC
T ss_pred CCCCCCHHHHHHHHHhcCccceEEeec
Confidence 688999999999986 99998899875
No 45
>d1cbfa_ c.90.1.1 (A:) Cobalt precorrin-4 methyltransferase CbiF {Bacillus megaterium [TaxId: 1404]}
Probab=22.39 E-value=23 Score=25.71 Aligned_cols=30 Identities=23% Similarity=0.347 Sum_probs=25.1
Q ss_pred CCCceEEEEEeeccccCCCCCHHHHHHHHHHhH
Q 026293 117 NPPMKLLFVEMGVGYDQHGQDVTAAAMRACRDA 149 (240)
Q Consensus 117 ~~~mKRlfIEmGMG~DlHGQD~TKAA~RAVrDA 149 (240)
..-||.++|=+|-|. -...|-+|.+|+++|
T Consensus 6 ~~~mklyiVG~GpGd---p~~lT~~A~~~L~~a 35 (239)
T d1cbfa_ 6 GSHMKLYIIGAGPGD---PDLITVKGLKLLQQA 35 (239)
T ss_dssp STTSEEEEEECBSSC---GGGSCHHHHHHHHHC
T ss_pred CCCcEEEEEEECCCC---HHHHHHHHHHHHHcC
Confidence 456899999999885 466899999999987
No 46
>d2adca1 d.58.7.1 (A:335-443) Polypyrimidine tract-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.24 E-value=15 Score=24.45 Aligned_cols=25 Identities=16% Similarity=0.335 Sum_probs=21.8
Q ss_pred cccccHHHHhhhcC-CCceeeEEEEc
Q 026293 184 QQLLDIERVKSVFP-YGKILDVEVVD 208 (240)
Q Consensus 184 Pe~VD~eaVkavfP-YG~v~tVeVV~ 208 (240)
|+.++.+.|++.|= ||+|..|.++.
T Consensus 12 p~~~te~~L~~~F~~fG~I~~v~i~~ 37 (109)
T d2adca1 12 PERVTPQSLFILFGVYGDVQRVKILF 37 (109)
T ss_dssp TTTCCHHHHHHHHHHHTCEEEEEECC
T ss_pred cccCCHHHHHHHHhhccccceEEEEe
Confidence 67899999999985 99998898864
No 47
>d1x4ba1 d.58.7.1 (A:8-110) Heterogeneous nuclear ribonucleoproteins A2/B1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.93 E-value=26 Score=23.82 Aligned_cols=26 Identities=23% Similarity=0.386 Sum_probs=22.3
Q ss_pred CcccccHHHHhhhcC-CCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeVV~ 208 (240)
||..++.+.|++.|- ||++..+.+..
T Consensus 28 Lp~~~te~~L~~~F~~~G~i~~~~i~~ 54 (103)
T d1x4ba1 28 LSFETTEESLRNYYEQWGKLTDCVVMR 54 (103)
T ss_dssp CTTCCCHHHHHHHHTSSCCCSEEEEEC
T ss_pred CCCcCCHHHHHHHHHhhCcccceeecc
Confidence 678999999999997 99998888753
No 48
>d2cpja1 d.58.7.1 (A:65-150) Non-POU domain-containing octamer-binding protein, NonO {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.75 E-value=36 Score=22.09 Aligned_cols=26 Identities=27% Similarity=0.419 Sum_probs=22.3
Q ss_pred CcccccHHHHhhhcC-CCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeVV~ 208 (240)
+|..++.+.|++.|= ||++.++.+..
T Consensus 16 Lp~~~~~~~l~~~F~~~G~i~~i~~~~ 42 (86)
T d2cpja1 16 LPPDITEEEMRKLFEKYGKAGEVFIHK 42 (86)
T ss_dssp CCTTCCHHHHHHHTSTTCCCSEEEEET
T ss_pred CCCCCCHHHHHHHHHHhCCceEeeeec
Confidence 688899999999995 99998888764
No 49
>d1zh5a2 d.58.7.1 (A:105-189) Lupus LA protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.69 E-value=33 Score=22.21 Aligned_cols=26 Identities=12% Similarity=0.340 Sum_probs=21.8
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~ 208 (240)
+|..+..+.|++.| .||.+..|.+..
T Consensus 14 lp~~~te~~l~~~F~~~G~v~~v~l~~ 40 (85)
T d1zh5a2 14 FPTDATLDDIKEWLEDKGQVLNIQMRR 40 (85)
T ss_dssp CCTTCCHHHHHHHHTTSCCEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHhcccccceeee
Confidence 58889999999999 599987777764
No 50
>d1t11a2 d.241.2.1 (A:1-129) Trigger factor ribosome-binding domain {Vibrio cholerae [TaxId: 666]}
Probab=21.35 E-value=26 Score=25.03 Aligned_cols=27 Identities=19% Similarity=0.410 Sum_probs=22.1
Q ss_pred CCCHHHHHHHHHHhHHhhCCccccccC
Q 026293 135 GQDVTAAAMRACRDAISSNSIPAFRRG 161 (240)
Q Consensus 135 GQD~TKAA~RAVrDAI~hNSIp~~~~~ 161 (240)
..++.++=.+|+++.-.+..|||||.|
T Consensus 21 ~~e~~~~~~~~~~~~~k~~~ipGFRkG 47 (129)
T d1t11a2 21 AANIEDAVAAELRNIAKNRRFDGFRKG 47 (129)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTSCSS
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 357777888888888889999999953
No 51
>d1x4ga1 d.58.7.1 (A:8-103) Nucleolysin TIAR {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.83 E-value=22 Score=23.77 Aligned_cols=35 Identities=20% Similarity=0.509 Sum_probs=26.9
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEEcCCcccccCceeccC
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVVDGGLICSSGVHVAEL 222 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV~GGL~v~sGI~ipe~ 222 (240)
||..++.+.|+++| +||.+..|.++.. .|.+.=++
T Consensus 26 L~~~~te~~L~~~F~~fG~i~~v~i~~~-----kg~afV~f 61 (96)
T d1x4ga1 26 IASGLTDQLMRQTFSPFGQIMEIRVFPE-----KGYSFVRF 61 (96)
T ss_dssp CSSCCCHHHHHHHHHHHSCEEEEEEETT-----TTEEEEEE
T ss_pred CCCCCCHHHHHHHHHHhCCceEEEEEec-----ceEEEEEE
Confidence 58889999999998 5999988988764 45544444
No 52
>d1wf0a_ d.58.7.1 (A:) TAR DNA-binding protein 43, TDP-43 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.75 E-value=27 Score=22.68 Aligned_cols=24 Identities=21% Similarity=0.515 Sum_probs=20.4
Q ss_pred CcccccHHHHhhhcC-CCceeeEEE
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEV 206 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeV 206 (240)
||..++.+.|++.|- ||+++.|.+
T Consensus 13 Lp~~~te~~L~~~F~~~G~v~~v~~ 37 (88)
T d1wf0a_ 13 CTGDMTEDELREFFSQYGDVMDVFI 37 (88)
T ss_dssp CCSSSCHHHHHHHSTTTSCCCEEEC
T ss_pred CCCCCCHHHHHHHHHHcCCceEEEE
Confidence 688999999999996 999866654
No 53
>d2cqba1 d.58.7.1 (A:1-89) Peptidyl-prolyl cis-trans isomerase E, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.62 E-value=19 Score=23.51 Aligned_cols=25 Identities=28% Similarity=0.647 Sum_probs=21.5
Q ss_pred CcccccHHHHhhhc-CCCceeeEEEE
Q 026293 183 LQQLLDIERVKSVF-PYGKILDVEVV 207 (240)
Q Consensus 183 ~Pe~VD~eaVkavf-PYG~v~tVeVV 207 (240)
||..++.+.|++.| +||++.+|.++
T Consensus 13 Lp~~~te~~l~~~F~~~G~i~~v~i~ 38 (89)
T d2cqba1 13 LAEEVDDKVLHAAFIPFGDITDIQIP 38 (89)
T ss_dssp CCSSCCHHHHHHHHTTTSCCCCEECC
T ss_pred CCCcCCHHHHHHHHhhCCeEEecccc
Confidence 68899999999988 59998788775
No 54
>d1h2vz_ d.58.7.1 (Z:) CBP20, 20KDa nuclear cap-binding protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.34 E-value=30 Score=22.75 Aligned_cols=26 Identities=19% Similarity=0.199 Sum_probs=22.3
Q ss_pred CcccccHHHHhhhcC-CCceeeEEEEc
Q 026293 183 LQQLLDIERVKSVFP-YGKILDVEVVD 208 (240)
Q Consensus 183 ~Pe~VD~eaVkavfP-YG~v~tVeVV~ 208 (240)
+|..++.+.|++.|- ||.+.+|.++.
T Consensus 15 lp~~~te~~l~~~F~~~G~i~~v~i~~ 41 (93)
T d1h2vz_ 15 LSFYTTEEQIYELFSKSGDIKKIIMGL 41 (93)
T ss_dssp CCTTCCHHHHHHHHGGGSCEEEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHCCcceecccc
Confidence 577899999999986 99988888865
Done!